Query 002899
Match_columns 869
No_of_seqs 885 out of 5831
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 05:53:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002899.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002899hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asz_A BDNF/NT-3 growth factor 100.0 1.9E-45 6.6E-50 396.2 16.0 205 638-845 13-233 (299)
2 4fih_A Serine/threonine-protei 100.0 1.1E-44 3.9E-49 395.1 20.3 198 638-845 74-272 (346)
3 4aoj_A High affinity nerve gro 100.0 1E-44 3.5E-49 395.9 19.5 205 638-845 41-263 (329)
4 4gt4_A Tyrosine-protein kinase 100.0 1.5E-44 5E-49 391.0 18.0 215 639-859 27-261 (308)
5 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.7E-44 5.8E-49 387.9 17.7 200 638-845 32-236 (311)
6 4b9d_A Serine/threonine-protei 100.0 1.5E-44 5.2E-49 394.7 17.3 201 638-845 24-227 (350)
7 3omv_A RAF proto-oncogene seri 100.0 3.8E-44 1.3E-48 386.2 19.5 199 637-845 35-239 (307)
8 4fie_A Serine/threonine-protei 100.0 1.1E-43 3.7E-48 396.9 22.0 198 638-845 151-349 (423)
9 3fpq_A Serine/threonine-protei 100.0 3.5E-43 1.2E-47 375.9 21.4 195 641-845 29-231 (290)
10 4g3f_A NF-kappa-beta-inducing 100.0 2.6E-43 8.8E-48 383.4 18.8 196 638-846 58-259 (336)
11 3ubd_A Ribosomal protein S6 ki 100.0 8.1E-44 2.8E-48 382.7 13.0 199 638-845 24-228 (304)
12 3hyh_A Carbon catabolite-derep 100.0 7.2E-43 2.5E-47 370.2 19.3 197 638-845 13-214 (275)
13 3hmm_A TGF-beta receptor type- 100.0 3.6E-42 1.2E-46 372.9 16.7 197 638-844 3-219 (303)
14 4ase_A Vascular endothelial gr 100.0 2.7E-42 9.1E-47 379.9 15.5 215 629-846 55-291 (353)
15 4g31_A Eukaryotic translation 100.0 2.9E-41 1E-45 364.1 18.5 199 638-844 5-228 (299)
16 4b99_A Mitogen-activated prote 100.0 4.9E-40 1.7E-44 368.1 20.2 200 638-846 54-266 (398)
17 4f9c_A Cell division cycle 7-r 100.0 2.1E-39 7.3E-44 359.0 21.6 199 634-845 17-249 (361)
18 3v5w_A G-protein coupled recep 100.0 1.6E-39 5.5E-44 378.8 21.5 207 638-855 189-403 (689)
19 1ogq_A PGIP-2, polygalacturona 100.0 6.7E-39 2.3E-43 349.9 20.6 285 2-324 7-301 (313)
20 3uto_A Twitchin; kinase, muscl 100.0 2.1E-38 7.1E-43 372.2 20.7 200 637-845 156-358 (573)
21 4aw2_A Serine/threonine-protei 100.0 1.7E-37 5.9E-42 352.9 17.0 210 629-845 65-283 (437)
22 2qkw_B Protein kinase; three-h 100.0 5.6E-37 1.9E-41 335.9 19.1 227 630-860 31-258 (321)
23 3uim_A Brassinosteroid insensi 100.0 7.8E-37 2.7E-41 335.4 17.4 235 626-861 18-255 (326)
24 2id5_A Lingo-1, leucine rich r 100.0 1.2E-36 4.2E-41 352.1 18.9 310 53-378 31-368 (477)
25 3v8s_A RHO-associated protein 100.0 1E-36 3.4E-41 344.0 16.4 207 630-845 61-275 (410)
26 3fxz_A Serine/threonine-protei 100.0 8.2E-36 2.8E-40 323.0 22.8 199 637-845 19-218 (297)
27 2c30_A Serine/threonine-protei 100.0 1.2E-35 4.1E-40 325.4 23.0 214 622-845 19-243 (321)
28 4eco_A Uncharacterized protein 100.0 1.9E-36 6.6E-41 362.3 18.2 321 2-331 31-474 (636)
29 2vd5_A DMPK protein; serine/th 100.0 1.9E-36 6.4E-41 342.0 16.5 211 629-846 52-273 (412)
30 1o6l_A RAC-beta serine/threoni 100.0 7.3E-36 2.5E-40 328.8 19.1 199 638-845 5-207 (337)
31 3fe3_A MAP/microtubule affinit 100.0 8.3E-36 2.8E-40 327.4 19.4 199 637-845 14-216 (328)
32 3zgw_A Maternal embryonic leuc 100.0 6.9E-36 2.4E-40 330.1 18.7 202 636-845 8-212 (347)
33 3s95_A LIMK-1, LIM domain kina 100.0 2.6E-35 9E-40 320.9 23.0 202 637-845 9-224 (310)
34 3txo_A PKC-L, NPKC-ETA, protei 100.0 6.7E-36 2.3E-40 331.3 17.1 200 637-845 22-226 (353)
35 4ecn_A Leucine-rich repeat pro 100.0 1.6E-35 5.6E-40 361.0 21.8 318 2-331 270-714 (876)
36 4eqm_A Protein kinase; transfe 100.0 1.7E-35 5.9E-40 319.9 19.2 201 637-845 10-214 (294)
37 3v47_A TOLL-like receptor 5B a 100.0 1E-35 3.4E-40 342.1 18.3 294 53-354 29-428 (455)
38 4dc2_A Protein kinase C IOTA t 100.0 1.6E-35 5.6E-40 332.3 19.3 200 637-845 51-255 (396)
39 4fr4_A YANK1, serine/threonine 100.0 3.2E-35 1.1E-39 328.8 21.5 208 638-855 15-229 (384)
40 2yab_A Death-associated protei 100.0 5.4E-35 1.9E-39 324.9 22.0 200 636-845 10-220 (361)
41 1xjd_A Protein kinase C, theta 100.0 2.5E-35 8.4E-40 325.6 18.7 203 634-845 13-220 (345)
42 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.3E-35 4.4E-40 331.3 16.4 203 636-844 63-286 (365)
43 1fot_A TPK1 delta, CAMP-depend 100.0 3.7E-35 1.3E-39 320.8 19.5 196 638-845 6-205 (318)
44 3rgz_A Protein brassinosteroid 100.0 2.4E-35 8.3E-40 360.8 19.8 305 2-329 13-358 (768)
45 4g8a_A TOLL-like receptor 4; l 100.0 3.4E-35 1.2E-39 351.6 20.5 318 53-383 51-626 (635)
46 2psq_A Fibroblast growth facto 100.0 6E-35 2.1E-39 326.2 20.8 207 637-846 80-309 (370)
47 3a8x_A Protein kinase C IOTA t 100.0 5.2E-35 1.8E-39 323.4 19.1 199 638-845 9-212 (345)
48 3niz_A Rhodanese family protei 100.0 1.5E-34 5E-39 315.3 22.2 202 637-847 20-224 (311)
49 3p86_A Serine/threonine-protei 100.0 5.6E-35 1.9E-39 318.2 18.4 205 636-845 35-241 (309)
50 3tki_A Serine/threonine-protei 100.0 9.5E-35 3.2E-39 318.5 20.2 202 637-846 6-211 (323)
51 2i0e_A Protein kinase C-beta I 100.0 4.6E-35 1.6E-39 324.4 17.9 201 636-845 18-223 (353)
52 1tki_A Titin; serine kinase, m 100.0 1.2E-34 4.2E-39 317.3 21.0 199 637-845 4-205 (321)
53 4hcu_A Tyrosine-protein kinase 100.0 5.3E-35 1.8E-39 311.6 17.3 201 637-845 9-210 (269)
54 1rdq_E PKA C-alpha, CAMP-depen 100.0 8E-35 2.7E-39 322.4 19.1 196 638-845 41-240 (350)
55 3a62_A Ribosomal protein S6 ki 100.0 7.7E-35 2.6E-39 319.8 18.6 200 637-845 16-223 (327)
56 2y0a_A Death-associated protei 100.0 2E-34 6.7E-39 316.5 21.8 199 637-845 10-219 (326)
57 2bdw_A Hypothetical protein K1 100.0 1.4E-34 4.8E-39 322.2 20.6 201 635-845 26-232 (362)
58 3kul_A Ephrin type-A receptor 100.0 9.3E-35 3.2E-39 318.9 18.9 201 638-845 49-257 (325)
59 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.1E-34 3.7E-39 308.9 18.8 201 637-845 7-208 (268)
60 1kob_A Twitchin; kinase, intra 100.0 2.3E-34 8E-39 322.7 21.5 200 637-845 50-252 (387)
61 3c0i_A Peripheral plasma membr 100.0 1.3E-34 4.4E-39 321.3 18.4 204 637-845 23-235 (351)
62 2nru_A Interleukin-1 receptor- 100.0 6.7E-34 2.3E-38 309.2 23.6 215 625-846 12-237 (307)
63 2izr_A Casein kinase I isoform 100.0 2.8E-34 9.6E-39 315.8 20.7 205 637-851 8-225 (330)
64 2acx_A G protein-coupled recep 100.0 2.9E-34 1E-38 334.2 22.0 202 637-846 183-388 (576)
65 3soa_A Calcium/calmodulin-depe 100.0 2E-34 6.8E-39 328.8 19.9 202 635-845 8-215 (444)
66 3zyj_A Leucine-rich repeat-con 100.0 3.7E-34 1.3E-38 327.8 22.0 321 43-409 35-365 (440)
67 2qol_A Ephrin receptor; recept 100.0 1.2E-34 4.2E-39 324.0 17.6 202 637-845 44-253 (373)
68 3soc_A Activin receptor type-2 100.0 8E-35 2.7E-39 319.0 15.8 199 637-846 23-241 (322)
69 2pmi_A Negative RE, cyclin-dep 100.0 3.5E-34 1.2E-38 313.2 20.7 205 637-846 4-212 (317)
70 2r5t_A Serine/threonine-protei 100.0 8.6E-35 2.9E-39 324.6 16.0 200 637-845 37-241 (373)
71 3gen_A Tyrosine-protein kinase 100.0 1.5E-34 5.1E-39 310.5 17.0 201 637-845 23-224 (283)
72 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.7E-34 5.8E-39 317.7 17.8 197 638-845 9-210 (336)
73 3o0g_A Cell division protein k 100.0 7.3E-34 2.5E-38 306.7 22.3 198 638-844 2-203 (292)
74 3qd2_B Eukaryotic translation 100.0 3.7E-34 1.3E-38 314.3 20.2 202 637-843 5-276 (332)
75 3vq2_A TLR4, TOLL-like recepto 100.0 4.5E-34 1.5E-38 340.7 22.6 322 53-379 31-597 (606)
76 2zv2_A Calcium/calmodulin-depe 100.0 4.1E-34 1.4E-38 309.6 20.2 199 637-845 12-242 (298)
77 4euu_A Serine/threonine-protei 100.0 5.2E-34 1.8E-38 312.0 21.1 202 638-846 9-226 (319)
78 1ob3_A PFPK5, cell division co 100.0 2.5E-34 8.5E-39 309.8 18.1 200 638-846 2-204 (288)
79 3c4z_A Rhodopsin kinase; Ser/T 100.0 6.9E-34 2.4E-38 330.3 22.8 205 637-846 184-392 (543)
80 4ejn_A RAC-alpha serine/threon 100.0 7.9E-35 2.7E-39 333.8 14.5 200 637-845 147-351 (446)
81 3ork_A Serine/threonine protei 100.0 1E-34 3.6E-39 316.4 14.7 201 637-845 11-221 (311)
82 3cbl_A C-FES, proto-oncogene t 100.0 1E-34 3.4E-39 325.4 14.9 202 637-845 113-318 (377)
83 3rgz_A Protein brassinosteroid 100.0 3.6E-34 1.2E-38 350.4 21.2 277 55-331 369-721 (768)
84 2x4f_A Myosin light chain kina 100.0 3.5E-34 1.2E-38 320.2 19.3 194 643-845 94-290 (373)
85 1qcf_A Haematopoetic cell kina 100.0 1.2E-34 4.2E-39 332.9 15.7 204 634-845 184-388 (454)
86 3ugc_A Tyrosine-protein kinase 100.0 2E-34 6.9E-39 311.5 16.2 202 637-845 9-219 (295)
87 2w4o_A Calcium/calmodulin-depe 100.0 4E-34 1.4E-38 317.0 18.3 198 636-845 51-252 (349)
88 3f3z_A Calcium/calmodulin-depe 100.0 8.6E-34 3E-38 303.5 20.3 199 636-845 7-209 (277)
89 3t6q_A CD180 antigen; protein- 100.0 1.8E-34 6.2E-39 344.1 16.5 309 56-379 280-599 (606)
90 1opk_A P150, C-ABL, proto-onco 100.0 3.1E-34 1.1E-38 332.8 17.5 204 636-846 218-423 (495)
91 3vhe_A Vascular endothelial gr 100.0 2E-34 6.8E-39 320.6 15.2 217 627-846 11-299 (359)
92 3gni_B Strad alpha; kinase fol 100.0 1.2E-33 4.2E-38 318.0 21.7 204 637-846 24-240 (389)
93 3oz6_A Mitogen-activated prote 100.0 6.9E-34 2.4E-38 320.0 19.4 202 635-846 6-234 (388)
94 1vzo_A Ribosomal protein S6 ki 100.0 3.8E-34 1.3E-38 318.0 17.0 202 637-846 53-265 (355)
95 3kn6_A Ribosomal protein S6 ki 100.0 8.8E-34 3E-38 311.1 19.6 191 643-845 16-211 (325)
96 3llt_A Serine/threonine kinase 100.0 6.4E-34 2.2E-38 316.8 18.8 209 626-846 23-262 (360)
97 3p1a_A MYT1 kinase, membrane-a 100.0 9.2E-34 3.1E-38 309.0 19.1 197 637-844 56-256 (311)
98 4agu_A Cyclin-dependent kinase 100.0 1.7E-33 6E-38 306.5 21.0 201 638-847 3-207 (311)
99 1luf_A Muscle-specific tyrosin 100.0 4.7E-34 1.6E-38 315.4 16.7 208 635-845 44-279 (343)
100 1mp8_A Focal adhesion kinase 1 100.0 6.9E-34 2.3E-38 305.1 17.5 202 637-846 14-221 (281)
101 3zyi_A Leucine-rich repeat-con 100.0 6.3E-34 2.2E-38 327.0 18.4 305 43-392 46-360 (452)
102 2qr7_A Ribosomal protein S6 ki 100.0 7.5E-34 2.6E-38 313.7 18.3 209 636-857 20-234 (342)
103 3t9t_A Tyrosine-protein kinase 100.0 5.3E-34 1.8E-38 303.2 16.4 201 637-845 7-208 (267)
104 1csn_A Casein kinase-1; phosph 100.0 3.3E-33 1.1E-37 302.1 22.8 201 637-847 9-222 (298)
105 2ivs_A Proto-oncogene tyrosine 100.0 1E-33 3.4E-38 308.6 18.7 207 637-846 22-256 (314)
106 1k9a_A Carboxyl-terminal SRC k 100.0 1.7E-33 5.7E-38 322.9 21.5 198 637-847 192-391 (450)
107 3tt0_A Basic fibroblast growth 100.0 1E-33 3.5E-38 317.9 19.3 206 637-845 68-296 (382)
108 3g33_A Cell division protein k 100.0 1.2E-33 4E-38 307.6 19.0 203 635-846 6-222 (308)
109 3poz_A Epidermal growth factor 100.0 5.9E-34 2E-38 312.8 16.9 202 637-846 14-223 (327)
110 3kfa_A Tyrosine-protein kinase 100.0 2.7E-34 9.3E-39 309.2 13.9 205 635-846 10-216 (288)
111 2a2a_A Death-associated protei 100.0 1.8E-33 6E-38 308.2 20.5 199 637-845 11-220 (321)
112 3l9p_A Anaplastic lymphoma kin 100.0 2.2E-34 7.5E-39 321.4 13.5 206 637-845 70-289 (367)
113 3hko_A Calcium/calmodulin-depe 100.0 7.3E-34 2.5E-38 314.3 17.4 210 633-845 21-278 (345)
114 3q4u_A Activin receptor type-1 100.0 1.6E-33 5.5E-38 305.0 19.7 196 637-845 7-235 (301)
115 3kk8_A Calcium/calmodulin depe 100.0 2.5E-33 8.7E-38 300.9 20.8 199 637-845 5-209 (284)
116 3uc3_A Serine/threonine-protei 100.0 1.3E-33 4.3E-38 314.4 19.1 199 637-846 19-221 (361)
117 3dtc_A Mitogen-activated prote 100.0 1.1E-33 3.6E-38 301.7 17.7 198 638-845 7-216 (271)
118 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 4E-34 1.4E-38 328.2 15.5 202 636-845 182-384 (452)
119 3lb7_A RAF proto-oncogene seri 100.0 1.6E-33 5.3E-38 306.6 19.3 200 637-846 35-240 (307)
120 2y94_A 5'-AMP-activated protei 100.0 1.4E-33 4.7E-38 324.1 19.8 198 638-845 16-218 (476)
121 2eue_A Carbon catabolite derep 100.0 1.8E-33 6.1E-38 300.8 19.2 197 638-845 13-214 (275)
122 1qpc_A LCK kinase; alpha beta 100.0 1.4E-33 4.9E-38 302.2 18.3 201 637-845 12-213 (279)
123 3pfq_A PKC-B, PKC-beta, protei 100.0 9.8E-34 3.4E-38 339.6 18.9 201 636-845 339-544 (674)
124 3kex_A Receptor tyrosine-prote 100.0 9.7E-34 3.3E-38 310.8 16.9 202 638-847 13-222 (325)
125 3mtl_A Cell division protein k 100.0 7.2E-34 2.5E-38 311.7 15.8 200 638-846 2-204 (324)
126 3ttj_A Mitogen-activated prote 100.0 8.3E-34 2.9E-38 326.1 16.7 197 637-846 61-266 (464)
127 1nxk_A MAP kinase-activated pr 100.0 2.8E-33 9.6E-38 315.9 20.7 196 638-846 61-266 (400)
128 3dls_A PAS domain-containing s 100.0 8.3E-34 2.8E-38 312.6 16.0 199 636-844 22-231 (335)
129 2ac3_A MAP kinase-interacting 100.0 2.8E-33 9.6E-38 305.6 19.9 202 637-846 11-229 (316)
130 3op5_A Serine/threonine-protei 100.0 1.5E-33 5.2E-38 314.3 18.1 202 636-845 33-263 (364)
131 3qup_A Tyrosine-protein kinase 100.0 1.2E-33 4.1E-38 309.6 17.0 209 635-846 20-243 (323)
132 1u5q_A Serine/threonine protei 100.0 1.6E-33 5.6E-38 311.8 18.0 195 638-845 54-255 (348)
133 1rjb_A FL cytokine receptor; k 100.0 2.5E-33 8.4E-38 310.0 19.1 209 636-847 43-279 (344)
134 3cok_A Serine/threonine-protei 100.0 2.3E-33 7.9E-38 300.3 18.3 200 638-845 11-214 (278)
135 3fdn_A Serine/threonine-protei 100.0 1.7E-33 5.8E-38 301.6 17.0 199 636-845 7-209 (279)
136 3dbq_A Dual specificity protei 100.0 1.6E-33 5.4E-38 311.6 17.0 199 637-845 8-222 (343)
137 2h34_A Serine/threonine-protei 100.0 1.8E-33 6.1E-38 306.4 17.0 201 637-845 33-237 (309)
138 3bhy_A Death-associated protei 100.0 5.3E-33 1.8E-37 298.3 20.4 199 637-845 4-213 (283)
139 1ziw_A TOLL-like receptor 3; i 100.0 6E-33 2.1E-37 335.6 23.4 314 54-379 329-663 (680)
140 3is5_A Calcium-dependent prote 100.0 2.4E-33 8.2E-38 301.7 17.7 202 637-845 21-227 (285)
141 2rku_A Serine/threonine-protei 100.0 6E-33 2.1E-37 299.8 20.9 200 637-845 14-217 (294)
142 3lm5_A Serine/threonine-protei 100.0 2.9E-33 9.9E-38 307.3 18.7 217 621-845 11-235 (327)
143 1t46_A HOMO sapiens V-KIT hard 100.0 2.7E-33 9.4E-38 305.0 18.2 208 636-846 21-251 (313)
144 2yex_A Serine/threonine-protei 100.0 5.5E-33 1.9E-37 296.9 20.2 203 637-847 6-212 (276)
145 3mi9_A Cell division protein k 100.0 5.3E-33 1.8E-37 308.3 20.5 201 638-846 17-232 (351)
146 2pvf_A Fibroblast growth facto 100.0 4.1E-33 1.4E-37 307.0 19.3 208 636-846 33-263 (334)
147 2owb_A Serine/threonine-protei 100.0 6.1E-33 2.1E-37 305.8 20.6 200 637-845 40-243 (335)
148 3cc6_A Protein tyrosine kinase 100.0 3.2E-33 1.1E-37 299.8 17.8 202 637-846 11-218 (281)
149 3i6u_A CDS1, serine/threonine- 100.0 2.7E-33 9.3E-38 318.1 18.1 200 635-845 132-346 (419)
150 3n9x_A Phosphotransferase; mal 100.0 4.9E-33 1.7E-37 317.4 20.2 198 637-843 25-252 (432)
151 1u59_A Tyrosine-protein kinase 100.0 7.3E-33 2.5E-37 298.1 20.2 201 638-846 9-217 (287)
152 4fvq_A Tyrosine-protein kinase 100.0 2.3E-33 8E-38 302.0 15.9 195 637-843 7-218 (289)
153 3rp9_A Mitogen-activated prote 100.0 3.1E-33 1.1E-37 321.8 17.9 193 637-838 52-279 (458)
154 2y7j_A Phosphorylase B kinase 100.0 8.2E-33 2.8E-37 308.4 20.7 207 629-845 85-307 (365)
155 2zmd_A Dual specificity protei 100.0 3.5E-33 1.2E-37 314.2 17.7 198 638-845 56-269 (390)
156 2vgo_A Serine/threonine-protei 100.0 6E-33 2E-37 298.2 18.8 198 637-845 13-214 (284)
157 3eqc_A Dual specificity mitoge 100.0 2E-33 6.8E-38 312.8 15.6 199 637-846 32-233 (360)
158 3pg1_A Mitogen-activated prote 100.0 4.4E-33 1.5E-37 310.2 18.3 209 628-846 12-237 (362)
159 2jam_A Calcium/calmodulin-depe 100.0 4.1E-33 1.4E-37 302.7 17.5 199 636-845 7-209 (304)
160 2h8h_A Proto-oncogene tyrosine 100.0 9.7E-34 3.3E-38 331.6 13.5 202 636-845 265-467 (535)
161 3gbz_A Kinase, CMGC CDK; ssgci 100.0 2.6E-33 8.9E-38 308.0 16.1 201 636-846 32-241 (329)
162 4eut_A Serine/threonine-protei 100.0 2.7E-33 9.3E-38 315.9 16.6 202 637-845 8-225 (396)
163 4f0f_A Serine/threonine-protei 100.0 9.1E-33 3.1E-37 297.2 19.9 200 637-847 18-232 (287)
164 3lxl_A Tyrosine-protein kinase 100.0 3.2E-33 1.1E-37 306.9 16.6 201 637-844 22-231 (327)
165 3a7i_A MST3 kinase, serine/thr 100.0 1.5E-32 5.3E-37 297.9 21.7 199 637-845 21-221 (303)
166 4e5w_A Tyrosine-protein kinase 100.0 3.6E-33 1.2E-37 302.6 16.7 199 638-843 21-229 (302)
167 1ua2_A CAK, cell division prot 100.0 4.5E-33 1.5E-37 308.3 17.7 204 634-846 6-216 (346)
168 3lij_A Calcium/calmodulin depe 100.0 6E-33 2E-37 322.4 19.3 198 637-845 36-239 (494)
169 1p4o_A Insulin-like growth fac 100.0 1.2E-33 4.1E-38 309.3 12.5 214 629-845 16-243 (322)
170 2eva_A TAK1 kinase - TAB1 chim 100.0 7E-33 2.4E-37 301.4 18.2 198 638-846 8-206 (307)
171 4aaa_A Cyclin-dependent kinase 100.0 6.5E-33 2.2E-37 305.0 17.9 201 637-846 24-228 (331)
172 3lzb_A Epidermal growth factor 100.0 7.4E-33 2.5E-37 304.0 18.3 202 637-846 14-223 (327)
173 1cm8_A Phosphorylated MAP kina 100.0 4.5E-33 1.5E-37 310.7 16.8 196 637-846 24-229 (367)
174 2v62_A Serine/threonine-protei 100.0 5.1E-33 1.7E-37 307.7 17.0 200 637-845 36-262 (345)
175 2clq_A Mitogen-activated prote 100.0 2E-32 6.8E-37 295.6 21.2 201 639-845 23-227 (295)
176 3kmu_A ILK, integrin-linked ki 100.0 4.8E-33 1.7E-37 296.2 16.0 197 638-845 10-213 (271)
177 4hgt_A Casein kinase I isoform 100.0 2E-32 7E-37 295.5 20.8 203 635-847 6-219 (296)
178 2a19_B Interferon-induced, dou 100.0 9.3E-33 3.2E-37 296.3 17.9 196 636-843 9-221 (284)
179 3og7_A AKAP9-BRAF fusion prote 100.0 7.2E-33 2.4E-37 298.5 16.9 199 637-845 23-227 (289)
180 3q5i_A Protein kinase; CDPK, m 100.0 1.6E-32 5.6E-37 319.5 21.1 200 636-846 34-250 (504)
181 2xir_A Vascular endothelial gr 100.0 4.7E-33 1.6E-37 303.6 15.4 216 628-846 17-254 (316)
182 3mwu_A Calmodulin-domain prote 100.0 7.9E-33 2.7E-37 320.7 18.1 199 636-845 20-224 (486)
183 1x8b_A WEE1HU, WEE1-like prote 100.0 1.4E-32 4.8E-37 295.2 18.8 200 636-844 9-232 (289)
184 1mqb_A Ephrin type-A receptor 100.0 1E-32 3.4E-37 303.8 18.1 201 638-845 44-253 (333)
185 2ozo_A Tyrosine-protein kinase 100.0 7.4E-33 2.5E-37 328.9 18.3 194 645-846 343-543 (613)
186 3j0a_A TOLL-like receptor 5; m 100.0 8E-33 2.7E-37 342.0 19.3 229 144-376 285-597 (844)
187 3nyv_A Calmodulin-domain prote 100.0 6.1E-33 2.1E-37 321.6 17.1 198 637-845 25-229 (484)
188 3uzp_A CKI-delta, CKID, casein 100.0 3.2E-32 1.1E-36 294.1 21.5 201 637-847 8-219 (296)
189 3eb0_A Putative uncharacterize 100.0 1.1E-32 3.7E-37 309.7 18.4 202 634-846 3-245 (383)
190 3nsz_A CK II alpha, casein kin 100.0 3.3E-32 1.1E-36 298.9 21.9 192 638-845 36-233 (330)
191 3lxp_A Non-receptor tyrosine-p 100.0 1.5E-32 5E-37 300.5 18.9 197 640-845 33-239 (318)
192 2xrw_A Mitogen-activated prote 100.0 1.3E-32 4.3E-37 307.7 18.8 197 637-846 24-229 (371)
193 3qyz_A Mitogen-activated prote 100.0 2E-32 6.7E-37 305.3 20.0 201 637-847 26-236 (364)
194 3kvw_A DYRK2, dual specificity 100.0 1.8E-32 6E-37 312.3 20.0 198 637-846 96-302 (429)
195 2i1m_A Macrophage colony-stimu 100.0 4E-33 1.4E-37 306.8 14.2 212 632-846 40-270 (333)
196 2h6d_A 5'-AMP-activated protei 100.0 1.2E-32 4E-37 294.5 17.0 199 637-845 10-213 (276)
197 1phk_A Phosphorylase kinase; g 100.0 3.3E-32 1.1E-36 294.4 20.7 200 636-845 15-231 (298)
198 3byv_A Rhoptry kinase; malaria 100.0 1.1E-33 3.8E-38 317.0 9.4 200 637-845 72-315 (377)
199 2ycf_A Serine/threonine-protei 100.0 2E-32 6.9E-37 299.8 19.2 200 636-846 8-222 (322)
200 3mdy_A Bone morphogenetic prot 100.0 3.5E-32 1.2E-36 299.5 21.2 199 631-839 30-248 (337)
201 1t4h_A Serine/threonine-protei 100.0 2.7E-32 9.3E-37 294.0 19.8 197 639-845 27-231 (290)
202 2r3i_A Cell division protein k 100.0 1.9E-32 6.5E-37 296.4 18.5 201 638-846 3-207 (299)
203 2fst_X Mitogen-activated prote 100.0 5.6E-33 1.9E-37 309.7 14.7 196 637-846 28-233 (367)
204 3c1x_A Hepatocyte growth facto 100.0 8.6E-33 2.9E-37 308.8 16.1 200 639-845 90-299 (373)
205 2w5a_A Serine/threonine-protei 100.0 6.1E-33 2.1E-37 297.1 14.2 207 637-845 5-218 (279)
206 2wqm_A Serine/threonine-protei 100.0 2.8E-32 9.5E-37 296.9 19.5 203 638-845 32-238 (310)
207 2buj_A Serine/threonine-protei 100.0 1.1E-32 3.8E-37 301.0 16.3 204 637-844 28-247 (317)
208 2w1i_A JAK2; chromosomal rearr 100.0 1.3E-32 4.3E-37 302.0 16.8 201 637-844 40-249 (326)
209 3com_A Serine/threonine-protei 100.0 3.2E-32 1.1E-36 296.9 19.8 200 636-845 27-227 (314)
210 1xbb_A Tyrosine-protein kinase 100.0 1.8E-32 6.2E-37 295.6 17.5 200 637-845 15-223 (291)
211 3brb_A Proto-oncogene tyrosine 100.0 1.8E-32 6.1E-37 298.8 17.6 210 634-846 30-253 (313)
212 2j7t_A Serine/threonine-protei 100.0 8.1E-33 2.8E-37 299.8 14.6 201 637-845 18-224 (302)
213 2pml_X PFPK7, Ser/Thr protein 100.0 1.6E-32 5.3E-37 303.9 17.0 200 637-846 30-255 (348)
214 1blx_A Cyclin-dependent kinase 100.0 3.4E-32 1.2E-36 298.3 19.3 202 636-846 9-222 (326)
215 4fl3_A Tyrosine-protein kinase 100.0 1.3E-32 4.4E-37 327.7 17.2 194 644-846 375-576 (635)
216 3f66_A Hepatocyte growth facto 100.0 2.7E-32 9.3E-37 295.1 18.2 201 638-845 25-235 (298)
217 4e7w_A Glycogen synthase kinas 100.0 1.9E-32 6.4E-37 308.7 17.6 199 637-846 39-245 (394)
218 1j1b_A Glycogen synthase kinas 100.0 3.4E-32 1.1E-36 309.2 19.7 209 638-859 54-271 (420)
219 1fvr_A Tyrosine-protein kinase 100.0 2.3E-32 8E-37 300.0 17.8 203 638-845 25-244 (327)
220 2jii_A Serine/threonine-protei 100.0 9.2E-33 3.1E-37 306.5 14.5 197 638-846 42-271 (352)
221 2i6l_A Mitogen-activated prote 100.0 2.7E-32 9.2E-37 297.9 17.7 200 637-846 10-228 (320)
222 1wak_A Serine/threonine-protei 100.0 4E-32 1.4E-36 306.0 19.5 199 637-847 36-297 (397)
223 3pls_A Macrophage-stimulating 100.0 4.5E-32 1.6E-36 293.2 19.1 198 639-843 22-228 (298)
224 2wtk_C Serine/threonine-protei 100.0 7.1E-32 2.4E-36 292.8 20.5 202 637-845 4-215 (305)
225 1byg_A CSK, protein (C-termina 100.0 1.6E-32 5.3E-37 294.0 14.7 197 637-846 20-218 (278)
226 3q60_A ROP5B; pseudokinase, tr 100.0 9.8E-33 3.3E-37 308.6 13.6 198 637-846 61-296 (371)
227 2x7f_A TRAF2 and NCK-interacti 100.0 5.1E-32 1.7E-36 297.0 19.1 204 634-845 20-236 (326)
228 3sv0_A Casein kinase I-like; t 100.0 1.4E-31 4.9E-36 307.9 23.6 204 637-850 6-220 (483)
229 3fme_A Dual specificity mitoge 100.0 2.3E-32 7.8E-37 294.3 15.7 202 637-845 6-215 (290)
230 1b6c_B TGF-B superfamily recep 100.0 8.3E-32 2.8E-36 297.3 20.4 204 629-845 33-269 (342)
231 1z57_A Dual specificity protei 100.0 7.7E-32 2.6E-36 296.6 20.1 199 637-847 13-238 (339)
232 2z66_A Variable lymphocyte rec 100.0 7E-33 2.4E-37 301.2 11.5 281 57-377 10-298 (306)
233 2b9h_A MAP kinase FUS3, mitoge 100.0 5E-32 1.7E-36 300.5 18.6 200 637-846 10-226 (353)
234 2yfx_A Tyrosine-protein kinase 100.0 2E-32 6.8E-37 300.6 15.1 206 637-845 29-248 (327)
235 3an0_A Dual specificity mitoge 100.0 2.7E-32 9.1E-37 301.2 16.0 202 637-845 50-259 (340)
236 3g2f_A Bone morphogenetic prot 100.0 1.7E-32 5.9E-37 302.0 14.4 195 637-844 12-236 (336)
237 4eco_A Uncharacterized protein 100.0 1.3E-32 4.3E-37 329.3 14.3 261 65-330 194-504 (636)
238 3rgf_A Cyclin-dependent kinase 100.0 2.2E-32 7.4E-37 309.6 15.4 203 638-846 20-239 (405)
239 3ll6_A Cyclin G-associated kin 100.0 2.4E-32 8.3E-37 300.5 15.4 205 637-845 27-255 (337)
240 2vwi_A Serine/threonine-protei 100.0 1.2E-32 4.1E-37 298.3 12.5 208 635-845 12-229 (303)
241 3e3p_A Protein kinase, putativ 100.0 8E-32 2.8E-36 299.7 18.7 209 630-846 15-235 (360)
242 3o6n_A APL1; leucine-rich repe 100.0 9.5E-32 3.3E-36 302.7 19.1 281 54-347 45-364 (390)
243 2z7x_B TOLL-like receptor 1, v 100.0 1E-31 3.6E-36 314.2 20.0 183 170-371 321-511 (520)
244 1u46_A ACK-1, activated CDC42 100.0 3.6E-32 1.2E-36 292.9 14.3 201 637-845 17-227 (291)
245 3gxj_A TGF-beta receptor type- 100.0 1.4E-33 4.9E-38 305.6 3.2 190 637-839 2-214 (303)
246 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.6E-31 5.3E-36 315.8 20.9 286 54-354 52-530 (562)
247 4exu_A Mitogen-activated prote 100.0 8.1E-32 2.8E-36 301.1 17.1 194 637-845 41-244 (371)
248 2z81_A CD282 antigen, TOLL-lik 100.0 8.6E-32 2.9E-36 317.0 18.0 138 53-190 25-165 (549)
249 2vx3_A Dual specificity tyrosi 100.0 1E-31 3.5E-36 301.5 17.7 204 633-846 49-261 (382)
250 2wei_A Calmodulin-domain prote 100.0 1.4E-31 4.9E-36 288.0 17.8 201 634-845 18-224 (287)
251 3aln_A Dual specificity mitoge 100.0 1.1E-31 3.6E-36 294.7 17.0 203 637-845 21-231 (327)
252 3cek_A Dual specificity protei 100.0 3.5E-32 1.2E-36 296.6 12.9 206 630-845 20-241 (313)
253 2j0j_A Focal adhesion kinase 1 100.0 9.6E-32 3.3E-36 321.4 17.7 203 635-845 387-595 (656)
254 3oja_B Anopheles plasmodium-re 100.0 2E-31 6.7E-36 317.0 20.3 280 54-346 51-369 (597)
255 2z80_A TOLL-like receptor 2, v 100.0 4.2E-32 1.4E-36 301.3 12.8 293 60-371 37-344 (353)
256 2eu9_A Dual specificity protei 100.0 3.9E-31 1.3E-35 293.1 19.8 198 637-846 18-242 (355)
257 1zy4_A Serine/threonine-protei 100.0 2.3E-31 7.9E-36 287.9 17.6 195 636-838 4-226 (303)
258 2iwi_A Serine/threonine-protei 100.0 1E-31 3.5E-36 292.7 14.6 200 634-844 27-240 (312)
259 3coi_A Mitogen-activated prote 100.0 1.8E-31 6E-36 296.3 16.7 195 637-846 23-227 (353)
260 1q8y_A SR protein kinase; tran 100.0 2.6E-31 8.8E-36 297.0 17.3 198 637-846 18-238 (373)
261 2z63_A TOLL-like receptor 4, v 100.0 3.6E-31 1.2E-35 313.1 19.4 133 54-186 28-162 (570)
262 3a99_A Proto-oncogene serine/t 100.0 1.5E-31 5.1E-36 292.7 14.9 200 634-844 39-250 (320)
263 1ozn_A Reticulon 4 receptor; N 100.0 1.8E-31 6.2E-36 287.0 15.3 257 57-377 14-272 (285)
264 2id5_A Lingo-1, leucine rich r 100.0 3.8E-31 1.3E-35 306.0 18.9 279 45-329 5-311 (477)
265 3fhr_A MAP kinase-activated pr 100.0 3.3E-31 1.1E-35 292.1 17.1 197 636-845 26-231 (336)
266 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.1E-31 3.8E-36 293.2 12.0 201 635-845 30-245 (319)
267 2rio_A Serine/threonine-protei 100.0 4E-31 1.4E-35 301.6 16.9 200 639-845 16-242 (434)
268 2vuw_A Serine/threonine-protei 100.0 3.3E-32 1.1E-36 300.0 7.1 191 637-844 19-278 (336)
269 2pzi_A Probable serine/threoni 100.0 5.1E-31 1.7E-35 317.9 16.5 192 637-845 79-278 (681)
270 3p23_A Serine/threonine-protei 100.0 7.4E-31 2.5E-35 298.8 15.9 198 637-845 23-232 (432)
271 2dyl_A Dual specificity mitoge 100.0 1.1E-30 3.7E-35 285.1 16.5 199 637-845 24-231 (318)
272 4fcg_A Uncharacterized protein 100.0 8.8E-31 3E-35 287.4 15.8 269 2-305 28-314 (328)
273 1xku_A Decorin; proteoglycan, 100.0 3.9E-30 1.3E-34 282.7 20.6 266 53-328 30-307 (330)
274 3v47_A TOLL-like receptor 5B a 100.0 2.7E-30 9.1E-35 296.9 19.4 270 58-331 14-364 (455)
275 3qa8_A MGC80376 protein; kinas 100.0 4.7E-31 1.6E-35 310.2 12.6 201 637-844 13-224 (676)
276 3uqc_A Probable conserved tran 100.0 1.6E-29 5.5E-34 271.9 17.8 172 637-846 30-205 (286)
277 3j0a_A TOLL-like receptor 5; m 100.0 2.8E-29 9.6E-34 310.3 22.5 279 53-331 23-355 (844)
278 3t6q_A CD180 antigen; protein- 100.0 3.9E-29 1.3E-33 298.0 22.3 275 55-331 255-540 (606)
279 2ft3_A Biglycan; proteoglycan, 100.0 1.7E-29 5.9E-34 277.8 17.5 264 53-327 32-307 (332)
280 4ecn_A Leucine-rich repeat pro 100.0 5.3E-29 1.8E-33 303.7 22.0 268 53-327 490-819 (876)
281 1ogq_A PGIP-2, polygalacturona 100.0 1.3E-29 4.5E-34 276.3 13.9 229 78-331 50-285 (313)
282 1xku_A Decorin; proteoglycan, 100.0 1.6E-28 5.4E-33 269.9 22.3 266 53-325 51-330 (330)
283 1ziw_A TOLL-like receptor 3; i 100.0 1.7E-28 5.8E-33 296.6 22.2 279 53-331 24-346 (680)
284 2z7x_B TOLL-like receptor 1, v 100.0 3.7E-29 1.3E-33 292.5 15.8 268 54-328 21-413 (520)
285 3m2w_A MAP kinase-activated pr 100.0 1.4E-28 4.7E-33 266.4 18.8 174 638-845 17-200 (299)
286 3dzo_A Rhoptry kinase domain; 100.0 2.3E-29 7.9E-34 285.2 13.3 199 638-845 78-319 (413)
287 3o6n_A APL1; leucine-rich repe 100.0 2.8E-28 9.4E-33 274.4 21.9 250 75-329 42-333 (390)
288 2ft3_A Biglycan; proteoglycan, 100.0 2E-28 6.8E-33 269.3 20.1 264 53-324 53-330 (332)
289 3vq2_A TLR4, TOLL-like recepto 100.0 1.4E-28 4.7E-33 293.2 19.4 162 170-332 396-563 (606)
290 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.9E-28 6.6E-33 289.3 19.6 263 57-328 34-442 (562)
291 3oja_B Anopheles plasmodium-re 100.0 8.4E-28 2.9E-32 285.7 21.4 244 76-327 49-314 (597)
292 2o6q_A Variable lymphocyte rec 100.0 5.7E-28 1.9E-32 257.6 17.9 225 44-350 9-234 (270)
293 1p9a_G Platelet glycoprotein I 100.0 4.8E-28 1.7E-32 260.8 17.5 220 73-351 5-224 (290)
294 2z81_A CD282 antigen, TOLL-lik 99.9 2.4E-27 8.3E-32 279.0 21.7 117 53-169 49-168 (549)
295 4fmz_A Internalin; leucine ric 99.9 4.5E-27 1.5E-31 260.0 22.1 260 53-330 65-327 (347)
296 1wwl_A Monocyte differentiatio 99.9 6.9E-29 2.4E-33 270.5 7.1 240 56-305 45-309 (312)
297 2z62_A TOLL-like receptor 4, v 99.9 1.2E-27 4E-32 256.0 16.5 254 58-371 11-267 (276)
298 2z66_A Variable lymphocyte rec 99.9 9.6E-28 3.3E-32 260.6 15.6 234 52-309 26-265 (306)
299 4fcg_A Uncharacterized protein 99.9 5.3E-27 1.8E-31 257.3 19.8 224 77-327 80-314 (328)
300 4fmz_A Internalin; leucine ric 99.9 1.4E-26 4.9E-31 255.9 23.3 259 54-330 44-303 (347)
301 4g8a_A TOLL-like receptor 4; l 99.9 6.9E-27 2.3E-31 279.5 21.9 153 58-213 35-189 (635)
302 1o6v_A Internalin A; bacterial 99.9 3.2E-26 1.1E-30 263.8 23.8 257 54-329 68-346 (466)
303 2z80_A TOLL-like receptor 2, v 99.9 1.9E-27 6.7E-32 263.7 12.5 257 53-309 51-318 (353)
304 3zyi_A Leucine-rich repeat-con 99.9 1.6E-26 5.4E-31 265.3 19.8 230 52-306 73-304 (452)
305 3o53_A Protein LRIM1, AGAP0063 99.9 4.5E-28 1.6E-32 264.7 6.0 257 55-324 11-272 (317)
306 4azs_A Methyltransferase WBDD; 99.9 5.8E-28 2E-32 283.4 6.2 185 645-842 241-437 (569)
307 1o6v_A Internalin A; bacterial 99.9 6.4E-26 2.2E-30 261.3 23.1 261 53-330 89-369 (466)
308 3oja_A Leucine-rich immune mol 99.9 1.2E-27 4E-32 276.8 8.5 266 60-339 16-286 (487)
309 3zyj_A Leucine-rich repeat-con 99.9 2.7E-26 9.2E-31 262.4 19.7 229 52-305 62-292 (440)
310 1wwl_A Monocyte differentiatio 99.9 7.2E-28 2.5E-32 262.5 6.0 248 73-328 38-310 (312)
311 1ozn_A Reticulon 4 receptor; N 99.9 6.4E-27 2.2E-31 251.4 13.0 237 52-312 30-268 (285)
312 3bz5_A Internalin-J, INLJ; leu 99.9 8.3E-26 2.8E-30 259.0 21.1 250 54-327 42-299 (457)
313 2z63_A TOLL-like receptor 4, v 99.9 4.9E-26 1.7E-30 269.0 18.2 266 58-329 11-340 (570)
314 3bz5_A Internalin-J, INLJ; leu 99.9 7.5E-25 2.6E-29 251.0 21.6 252 54-329 64-333 (457)
315 3o53_A Protein LRIM1, AGAP0063 99.9 3E-26 1E-30 250.2 7.4 239 79-339 11-254 (317)
316 3g06_A SSPH2 (leucine-rich rep 99.9 4.7E-25 1.6E-29 260.5 16.1 263 16-328 13-275 (622)
317 3oja_A Leucine-rich immune mol 99.9 5.3E-26 1.8E-30 262.9 5.4 235 53-300 33-270 (487)
318 1jl5_A Outer protein YOPM; leu 99.9 6.4E-25 2.2E-29 251.4 14.3 250 54-328 11-291 (454)
319 3en9_A Glycoprotease, O-sialog 99.9 3.6E-25 1.2E-29 258.3 12.2 184 641-843 339-538 (540)
320 2ast_B S-phase kinase-associat 99.9 2.4E-26 8E-31 252.9 0.8 287 1-331 12-310 (336)
321 2z62_A TOLL-like receptor 4, v 99.9 2.3E-24 8E-29 230.3 14.0 208 53-284 27-240 (276)
322 1jl5_A Outer protein YOPM; leu 99.9 1.3E-23 4.4E-28 240.6 21.1 241 55-330 132-373 (454)
323 3m19_A Variable lymphocyte rec 99.9 4.5E-24 1.5E-28 224.8 15.7 174 126-352 36-210 (251)
324 1z7x_W Ribonuclease inhibitor; 99.9 2E-26 6.9E-31 264.9 -3.7 274 55-328 86-412 (461)
325 2xwt_C Thyrotropin receptor; s 99.9 8.6E-24 3E-28 220.8 14.1 204 66-302 23-236 (239)
326 3rfs_A Internalin B, repeat mo 99.9 5.1E-24 1.7E-28 227.2 12.6 195 102-328 42-236 (272)
327 4glp_A Monocyte differentiatio 99.9 5.2E-23 1.8E-27 223.7 19.3 223 78-305 64-307 (310)
328 3goz_A Leucine-rich repeat-con 99.9 3.2E-25 1.1E-29 246.7 1.3 263 58-320 2-312 (362)
329 3rfs_A Internalin B, repeat mo 99.9 2.6E-23 9.1E-28 221.6 13.2 208 103-347 21-231 (272)
330 2v9t_B SLIT homolog 2 protein 99.9 2.2E-23 7.4E-28 214.9 12.0 188 128-379 14-201 (220)
331 3g06_A SSPH2 (leucine-rich rep 99.9 2.5E-22 8.7E-27 237.2 21.9 236 54-328 61-298 (622)
332 1p9a_G Platelet glycoprotein I 99.9 9.3E-23 3.2E-27 219.4 16.0 200 53-282 9-209 (290)
333 1z7x_W Ribonuclease inhibitor; 99.9 1.8E-25 6.3E-30 256.9 -5.7 272 56-327 30-354 (461)
334 4glp_A Monocyte differentiatio 99.9 4E-23 1.4E-27 224.7 11.3 230 96-328 59-308 (310)
335 2xwt_C Thyrotropin receptor; s 99.9 8.6E-23 2.9E-27 213.2 12.7 197 102-324 32-236 (239)
336 2o6q_A Variable lymphocyte rec 99.9 2.9E-22 1E-26 213.3 16.9 183 53-235 36-219 (270)
337 1h6u_A Internalin H; cell adhe 99.9 3E-22 1E-26 217.5 16.4 207 59-306 24-231 (308)
338 2v70_A SLIT-2, SLIT homolog 2 99.9 1.1E-22 3.6E-27 209.7 11.7 187 128-378 14-201 (220)
339 2ca6_A RAN GTPase-activating p 99.9 2.1E-24 7.2E-29 242.3 -1.5 255 69-323 23-339 (386)
340 3goz_A Leucine-rich repeat-con 99.9 1.2E-23 4.1E-28 234.0 4.0 247 82-328 2-298 (362)
341 3m19_A Variable lymphocyte rec 99.9 4E-22 1.4E-26 209.8 15.2 177 56-235 16-193 (251)
342 4ay9_X Follicle-stimulating ho 99.9 1.4E-22 4.9E-27 224.2 10.9 243 58-338 13-261 (350)
343 2ca6_A RAN GTPase-activating p 99.9 1.6E-23 5.5E-28 235.1 0.5 233 96-328 26-317 (386)
344 2xot_A Amphoterin-induced prot 99.9 1.3E-22 4.5E-27 225.5 7.5 191 127-374 41-238 (361)
345 1h6u_A Internalin H; cell adhe 99.9 3.7E-21 1.2E-25 208.9 17.6 194 123-329 39-232 (308)
346 1zar_A RIO2 kinase; serine kin 99.9 8E-22 2.7E-26 211.0 11.8 152 631-816 83-252 (282)
347 4ay9_X Follicle-stimulating ho 99.9 1.3E-21 4.4E-26 216.5 13.8 231 44-303 13-257 (350)
348 3cvr_A Invasion plasmid antige 99.9 1.8E-21 6E-26 227.2 14.3 217 79-347 60-292 (571)
349 2o6s_A Variable lymphocyte rec 99.8 6.7E-21 2.3E-25 194.3 13.1 180 57-269 10-190 (208)
350 2jwp_A Malectin, MGC80075; sug 99.8 4.4E-21 1.5E-25 188.9 9.6 158 377-567 7-170 (174)
351 2ast_B S-phase kinase-associat 99.8 3.6E-22 1.2E-26 219.5 1.5 233 54-313 70-314 (336)
352 2o6s_A Variable lymphocyte rec 99.8 1.2E-20 4E-25 192.6 12.4 176 104-312 10-185 (208)
353 3e6j_A Variable lymphocyte rec 99.8 2.3E-20 8E-25 193.4 13.5 167 127-350 21-188 (229)
354 3cvr_A Invasion plasmid antige 99.8 8.3E-20 2.8E-24 213.1 15.8 219 17-293 35-255 (571)
355 2xot_A Amphoterin-induced prot 99.8 4.1E-20 1.4E-24 205.3 11.8 175 57-234 21-202 (361)
356 2v9t_B SLIT homolog 2 protein 99.8 7.4E-20 2.5E-24 188.4 11.6 151 57-210 14-165 (220)
357 2wfh_A SLIT homolog 2 protein 99.8 7.4E-20 2.5E-24 184.3 10.4 162 153-379 14-175 (193)
358 2v70_A SLIT-2, SLIT homolog 2 99.8 1.5E-19 5.1E-24 186.1 11.9 152 57-211 14-167 (220)
359 1w8a_A SLIT protein; signaling 99.8 1.1E-19 3.6E-24 183.0 9.8 164 152-379 11-175 (192)
360 1h6t_A Internalin B; cell adhe 99.8 2E-19 6.9E-24 193.4 12.3 172 122-306 43-214 (291)
361 1m9s_A Internalin B; cell inva 99.8 2.2E-19 7.6E-24 211.7 11.9 190 103-307 23-212 (605)
362 1m9s_A Internalin B; cell inva 99.8 4.2E-19 1.4E-23 209.4 13.8 167 55-235 22-189 (605)
363 4b8c_D Glucose-repressible alc 99.8 3.2E-20 1.1E-24 224.3 3.7 261 2-304 133-403 (727)
364 3ogk_B Coronatine-insensitive 99.8 1.8E-20 6.2E-25 222.3 -0.5 187 143-329 287-528 (592)
365 1h6t_A Internalin B; cell adhe 99.8 1.2E-18 4E-23 187.5 13.5 193 124-329 23-215 (291)
366 3e6j_A Variable lymphocyte rec 99.8 1.8E-18 6.3E-23 179.1 14.3 151 58-212 23-174 (229)
367 1dce_A Protein (RAB geranylger 99.7 4.5E-20 1.5E-24 216.3 -2.7 189 75-309 346-550 (567)
368 4ezg_A Putative uncharacterize 99.7 8E-18 2.7E-22 170.0 13.5 154 121-305 40-194 (197)
369 1zth_A RIO1 serine protein kin 99.7 7.3E-18 2.5E-22 177.9 11.3 136 640-792 49-219 (258)
370 1xeu_A Internalin C; cellular 99.7 5.8E-18 2E-22 179.2 9.9 168 102-307 20-187 (263)
371 3ogk_B Coronatine-insensitive 99.7 5.4E-19 1.8E-23 209.6 1.2 175 146-320 339-541 (592)
372 1dce_A Protein (RAB geranylger 99.7 6.8E-20 2.3E-24 214.8 -6.7 105 223-331 443-550 (567)
373 4ezg_A Putative uncharacterize 99.7 4.7E-17 1.6E-21 164.3 14.3 149 102-281 45-194 (197)
374 1xeu_A Internalin C; cellular 99.7 7.5E-18 2.6E-22 178.3 8.4 170 76-283 17-187 (263)
375 2p1m_B Transport inhibitor res 99.7 7.1E-18 2.4E-22 200.0 2.9 149 54-204 130-345 (594)
376 1w8a_A SLIT protein; signaling 99.7 7.7E-17 2.6E-21 162.0 9.7 131 57-212 11-141 (192)
377 4b8c_D Glucose-repressible alc 99.7 1.9E-17 6.5E-22 200.1 3.9 202 56-281 193-404 (727)
378 2o6r_A Variable lymphocyte rec 99.7 2.6E-16 8.8E-21 155.9 10.7 127 152-304 10-136 (177)
379 2p1m_B Transport inhibitor res 99.6 1.4E-17 4.8E-22 197.4 1.0 221 54-276 105-405 (594)
380 3sb4_A Hypothetical leucine ri 99.6 1.5E-16 5E-21 174.3 8.3 243 55-307 26-312 (329)
381 2ell_A Acidic leucine-rich nuc 99.6 5.5E-16 1.9E-20 152.0 10.7 133 102-236 25-162 (168)
382 2wfh_A SLIT homolog 2 protein 99.6 5.9E-16 2E-20 155.6 10.4 128 57-211 13-140 (193)
383 2ell_A Acidic leucine-rich nuc 99.6 1.2E-15 4.2E-20 149.6 10.9 133 149-305 24-160 (168)
384 2je0_A Acidic leucine-rich nuc 99.6 7.4E-16 2.5E-20 147.9 7.2 126 102-229 18-148 (149)
385 3g39_A Variable lymphocyte rec 99.6 1.8E-15 6.1E-20 148.8 9.7 124 175-354 11-135 (170)
386 2o6r_A Variable lymphocyte rec 99.6 5.3E-15 1.8E-19 146.4 12.6 132 56-213 9-140 (177)
387 2je0_A Acidic leucine-rich nuc 99.6 2.8E-15 9.5E-20 143.8 9.8 128 149-300 17-148 (149)
388 4gyi_A RIO2 kinase; protein ki 99.6 8.1E-16 2.8E-20 168.8 6.3 136 639-792 96-265 (397)
389 4fdw_A Leucine rich hypothetic 99.6 1.5E-14 5.1E-19 162.2 16.5 248 66-324 124-380 (401)
390 3sb4_A Hypothetical leucine ri 99.6 2.1E-15 7.3E-20 165.0 8.6 257 66-334 15-317 (329)
391 4fdw_A Leucine rich hypothetic 99.5 3.5E-14 1.2E-18 159.2 15.0 241 54-305 135-383 (401)
392 1ds9_A Outer arm dynein; leuci 99.5 2.5E-16 8.5E-21 159.1 -4.1 155 121-305 14-185 (198)
393 2ifg_A High affinity nerve gro 99.5 2.7E-14 9.1E-19 157.4 11.4 151 177-390 12-164 (347)
394 2r9u_A Variable lymphocyte rec 99.5 1.7E-14 5.8E-19 142.3 8.8 121 176-352 15-136 (174)
395 1a9n_A U2A', U2A'; complex (nu 99.5 7.1E-15 2.4E-19 145.3 5.7 105 126-233 43-152 (176)
396 1ds9_A Outer arm dynein; leuci 99.5 4.6E-16 1.6E-20 157.1 -6.1 121 102-227 49-180 (198)
397 1a9n_A U2A', U2A'; complex (nu 99.5 4.6E-14 1.6E-18 139.4 8.0 134 72-210 13-153 (176)
398 3g39_A Variable lymphocyte rec 99.4 1.5E-13 5.2E-18 134.9 7.9 106 56-187 11-116 (170)
399 2r9u_A Variable lymphocyte rec 99.4 3E-13 1E-17 133.4 9.3 104 57-186 15-118 (174)
400 3un9_A NLR family member X1; l 99.3 8.5E-14 2.9E-18 154.5 -2.6 157 78-234 72-252 (372)
401 3un9_A NLR family member X1; l 99.3 1E-13 3.5E-18 153.8 -5.4 168 54-221 72-263 (372)
402 2ifg_A High affinity nerve gro 99.2 7E-12 2.4E-16 138.0 7.6 103 58-186 12-116 (347)
403 3tm0_A Aminoglycoside 3'-phosp 99.2 6.9E-11 2.3E-15 124.5 12.9 148 634-792 10-214 (263)
404 4fs7_A Uncharacterized protein 99.1 5.9E-10 2E-14 124.8 14.5 76 245-324 298-376 (394)
405 1nd4_A Aminoglycoside 3'-phosp 99.1 2.8E-10 9.6E-15 119.3 9.4 138 639-792 21-215 (264)
406 2ra8_A Uncharacterized protein 99.0 1.7E-10 5.7E-15 127.0 4.2 153 169-325 168-341 (362)
407 2ra8_A Uncharacterized protein 98.9 1.9E-10 6.4E-15 126.6 2.7 36 54-89 107-150 (362)
408 3rfe_A Platelet glycoprotein I 98.9 9.4E-10 3.2E-14 102.3 6.4 94 248-379 12-106 (130)
409 3sg8_A APH(2'')-ID; antibiotic 98.9 2E-09 6.9E-14 115.9 8.9 186 643-843 25-287 (304)
410 4gt6_A Cell surface protein; l 98.9 1.8E-08 6.2E-13 112.7 15.8 247 71-325 56-368 (394)
411 3dxp_A Putative acyl-COA dehyd 98.9 4.7E-09 1.6E-13 115.8 10.7 142 643-792 43-249 (359)
412 4fs7_A Uncharacterized protein 98.8 1.6E-08 5.5E-13 113.0 14.0 220 71-302 155-376 (394)
413 4gt6_A Cell surface protein; l 98.7 1.3E-07 4.3E-12 105.7 15.8 242 56-304 66-369 (394)
414 4h09_A Hypothetical leucine ri 98.6 3.1E-07 1.1E-11 101.9 15.3 267 55-334 47-352 (379)
415 3r70_A Aminoglycoside phosphot 98.5 1.2E-06 4.2E-11 94.7 16.4 185 639-841 38-296 (320)
416 1io0_A Tropomodulin; LRR prote 98.4 4.3E-08 1.5E-12 97.2 1.0 114 120-233 31-163 (185)
417 3rw6_A Nuclear RNA export fact 98.4 4.8E-08 1.6E-12 102.0 1.0 104 121-227 137-257 (267)
418 3d1u_A Putative fructosamine-3 98.4 1.8E-06 6E-11 91.9 13.2 144 642-791 19-216 (288)
419 1io0_A Tropomodulin; LRR prote 98.4 7.5E-08 2.6E-12 95.5 2.2 121 166-305 29-164 (185)
420 4h09_A Hypothetical leucine ri 98.4 2.9E-06 1E-10 94.0 14.9 241 54-305 69-345 (379)
421 4gkh_A Aminoglycoside 3'-phosp 98.2 5.9E-06 2E-10 86.8 13.0 137 645-793 31-225 (272)
422 3tdw_A Gentamicin resistance p 98.2 7.6E-06 2.6E-10 87.8 14.1 180 643-840 24-278 (306)
423 3rw6_A Nuclear RNA export fact 98.2 2.5E-07 8.4E-12 96.6 0.3 30 269-298 221-257 (267)
424 3ovc_A Hygromycin-B 4-O-kinase 98.1 2E-05 6.7E-10 86.7 13.2 145 643-793 46-245 (362)
425 3ats_A Putative uncharacterize 98.0 1.1E-05 3.7E-10 88.6 9.1 79 644-722 26-121 (357)
426 3e4g_A ATP synthase subunit S, 97.8 9.9E-06 3.4E-10 78.5 4.4 84 149-232 61-150 (176)
427 2q83_A YTAA protein; 2635576, 97.8 8.3E-05 2.8E-09 80.7 11.8 144 644-792 38-253 (346)
428 3e4g_A ATP synthase subunit S, 97.7 9.4E-06 3.2E-10 78.7 2.6 82 198-279 62-150 (176)
429 2olc_A MTR kinase, methylthior 97.7 0.00011 3.7E-09 81.9 10.9 75 643-719 35-120 (397)
430 3f7w_A Putative fructosamine-3 97.5 0.0003 1E-08 74.5 10.9 77 641-721 18-97 (288)
431 3jr1_A Putative fructosamine-3 97.5 0.00042 1.4E-08 74.1 12.0 140 643-787 41-232 (312)
432 2pyw_A Uncharacterized protein 97.4 0.00032 1.1E-08 78.7 10.0 79 760-840 231-313 (420)
433 1pgv_A TMD-1, tropomodulin TMD 97.3 6.5E-05 2.2E-09 74.1 1.5 15 172-186 69-83 (197)
434 1pgv_A TMD-1, tropomodulin TMD 97.2 0.00013 4.3E-09 72.1 3.0 117 169-304 37-169 (197)
435 3feg_A Choline/ethanolamine ki 97.1 0.0016 5.5E-08 71.6 10.1 144 644-792 56-255 (379)
436 2ppq_A HSK, HK, homoserine kin 96.9 0.011 3.9E-07 63.1 15.5 162 628-792 7-218 (322)
437 3csv_A Aminoglycoside phosphot 96.9 0.005 1.7E-07 66.4 12.7 145 644-793 24-219 (333)
438 1zyl_A Hypothetical protein YI 96.9 0.0051 1.8E-07 66.0 12.5 145 644-792 32-224 (328)
439 3dxq_A Choline/ethanolamine ki 96.9 0.003 1E-07 67.2 10.2 142 643-793 23-204 (301)
440 1nw1_A Choline kinase (49.2 KD 96.7 0.0052 1.8E-07 68.8 11.2 73 643-721 78-159 (429)
441 2qg7_A Ethanolamine kinase PV0 96.6 0.012 4.2E-07 66.3 13.0 74 643-721 113-188 (458)
442 3rfe_A Platelet glycoprotein I 96.4 0.0036 1.2E-07 57.5 5.9 56 153-210 12-68 (130)
443 3c5i_A Choline kinase; choline 96.3 0.0089 3E-07 65.5 9.0 73 644-721 39-121 (369)
444 3f2s_A CK, chetk-alpha, cholin 95.7 0.048 1.6E-06 60.0 11.6 145 644-792 58-281 (401)
445 3i1a_A Spectinomycin phosphotr 95.6 0.041 1.4E-06 59.4 10.5 34 760-793 205-238 (339)
446 3mes_A Choline kinase; malaria 94.7 0.084 2.9E-06 58.6 9.5 143 644-792 76-292 (424)
447 3g15_A CK, chetk-alpha, cholin 91.9 0.28 9.7E-06 54.1 8.0 30 763-792 246-281 (401)
448 2yle_A Protein spire homolog 1 87.5 1.8 6.1E-05 42.9 8.7 105 718-843 32-136 (229)
449 3cxl_A N-chimerin; SH2, RHO-GA 74.3 0.36 1.2E-05 54.3 -2.0 60 642-704 146-214 (463)
450 2jwa_A Receptor tyrosine-prote 71.6 5.5 0.00019 28.3 4.2 7 583-589 14-20 (44)
451 4ann_A ESSB; membrane protein, 70.6 14 0.00048 36.3 8.6 83 692-788 43-125 (215)
452 2ks1_B Epidermal growth factor 65.2 9.7 0.00033 27.1 4.5 13 581-593 11-23 (44)
453 2ks1_B Epidermal growth factor 63.4 14 0.00047 26.3 5.0 28 580-607 13-40 (44)
454 2l2t_A Receptor tyrosine-prote 60.8 13 0.00046 26.3 4.5 13 581-593 10-22 (44)
455 4ano_A ESSB; membrane protein, 59.1 18 0.00061 35.7 6.9 83 692-789 48-131 (219)
456 2k9y_A Ephrin type-A receptor 55.7 10 0.00035 26.3 3.3 17 579-595 11-27 (41)
457 2l2t_A Receptor tyrosine-prote 49.4 21 0.00072 25.4 3.9 27 581-607 13-39 (44)
458 2lz0_A Uncharacterized protein 47.7 33 0.0011 29.1 6.0 46 112-158 7-52 (100)
459 2lz0_A Uncharacterized protein 44.2 45 0.0015 28.2 6.3 49 134-183 5-53 (100)
460 2k1k_A Ephrin type-A receptor 43.7 16 0.00055 25.1 2.6 11 581-591 10-20 (38)
461 2l8s_A Integrin alpha-1; trans 42.3 31 0.0011 25.6 4.1 17 582-598 11-27 (54)
462 2k1k_A Ephrin type-A receptor 35.2 54 0.0018 22.4 4.1 25 577-601 10-34 (38)
463 2knc_A Integrin alpha-IIB; tra 28.0 77 0.0026 23.5 4.2 15 583-597 15-29 (54)
464 3ls8_A Phosphatidylinositol 3- 28.0 4.6E+02 0.016 29.9 12.8 85 698-790 403-501 (614)
465 2x6h_A GH13170P, VPS34, phosph 27.3 4.4E+02 0.015 30.6 12.8 45 739-790 529-575 (696)
466 1iij_A ERBB-2 receptor protein 22.1 30 0.001 23.2 0.9 7 583-589 10-16 (35)
467 2k1a_A Integrin alpha-IIB; sin 21.6 1.7E+02 0.0059 20.4 4.8 13 583-595 13-25 (42)
No 1
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.9e-45 Score=396.21 Aligned_cols=205 Identities=33% Similarity=0.543 Sum_probs=179.0
Q ss_pred cCCCCCCeeeccCceEEEEEEEc------CCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEE
Q 002899 638 NNFDPANKVGEGGFGSVYKGILS------DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLL 711 (869)
Q Consensus 638 ~~f~~~~~IG~G~fG~Vyka~~~------~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 711 (869)
++|.+.+.||+|+||+||+|++. +++.||||+++.......++|.+|++++++++|||||+++|+|.+++..+|
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 46778899999999999999874 467899999987777777899999999999999999999999999999999
Q ss_pred EEEeccCCchhhhhhcCCc--------ccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEE
Q 002899 712 VYEYMKNNCLSRAIFGKDT--------EYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKI 783 (869)
Q Consensus 712 V~E~~~~gsL~~~l~~~~~--------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl 783 (869)
|||||++|+|.++|+.... .....++|.+++.|+.|||+||+|||+++ ||||||||+|||+++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCccCHhhEEECCCCcEEE
Confidence 9999999999999976431 22347999999999999999999999987 999999999999999999999
Q ss_pred eecCCceeecCCCc-cccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHc-CCCCCCC
Q 002899 784 SDFGLAKLYEEDKT-HISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNY 845 (869)
Q Consensus 784 ~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~ 845 (869)
+|||+|+....... .......||+.|||||++.+..++.++|||||||++|||+| |+.||..
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~ 233 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQ 233 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCC
Confidence 99999987654332 22334578999999999999999999999999999999999 8999964
No 2
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.1e-44 Score=395.13 Aligned_cols=198 Identities=27% Similarity=0.519 Sum_probs=180.1
Q ss_pred cCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEEEec
Q 002899 638 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYM 716 (869)
Q Consensus 638 ~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~~ 716 (869)
+.|+..++||+|+||+||+|+.. +|+.||||++........+.+.+|+++|++++|||||++++++.+++.+|||||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 46888999999999999999975 68999999997665555677899999999999999999999999999999999999
Q ss_pred cCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeecCCC
Q 002899 717 KNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEEDK 796 (869)
Q Consensus 717 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~ 796 (869)
++|+|.+++... .+++..+..++.||+.||+|||+++ ||||||||+||||+.++.+||+|||+|+.+....
T Consensus 154 ~gg~L~~~l~~~------~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 224 (346)
T 4fih_A 154 EGGALTDIVTHT------RMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 224 (346)
T ss_dssp TTEEHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSSS
T ss_pred CCCcHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEECCCCCEEEecCcCceecCCCC
Confidence 999999988643 5899999999999999999999998 9999999999999999999999999998776543
Q ss_pred ccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 797 THISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 797 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
.. ....+||+.|||||++.+..|+.++|||||||++|||++|+.||..
T Consensus 225 ~~-~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~ 272 (346)
T 4fih_A 225 PR-RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN 272 (346)
T ss_dssp CC-BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred Cc-ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 32 3356899999999999999999999999999999999999999964
No 3
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1e-44 Score=395.94 Aligned_cols=205 Identities=31% Similarity=0.517 Sum_probs=173.2
Q ss_pred cCCCCCCeeeccCceEEEEEEEc------CCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEE
Q 002899 638 NNFDPANKVGEGGFGSVYKGILS------DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLL 711 (869)
Q Consensus 638 ~~f~~~~~IG~G~fG~Vyka~~~------~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 711 (869)
++|.+.++||+|+||+||+|++. +++.||||+++.......++|.+|++++++++|||||+++|+|.+++..+|
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 45667789999999999999874 478899999987777777899999999999999999999999999999999
Q ss_pred EEEeccCCchhhhhhcCCcc----------cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcE
Q 002899 712 VYEYMKNNCLSRAIFGKDTE----------YRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNA 781 (869)
Q Consensus 712 V~E~~~~gsL~~~l~~~~~~----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~ 781 (869)
|||||++|+|.++++..... ...+++|.+++.|+.|||+||+|||+++ ||||||||+||||++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHhhEEECCCCcE
Confidence 99999999999999765321 1246999999999999999999999987 9999999999999999999
Q ss_pred EEeecCCceeecCCC-ccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHc-CCCCCCC
Q 002899 782 KISDFGLAKLYEEDK-THISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNY 845 (869)
Q Consensus 782 kl~DFGla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~ 845 (869)
||+|||+++...... ........||+.|||||++.+..++.++|||||||++|||+| |+.||..
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~ 263 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQ 263 (329)
T ss_dssp EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCS
T ss_pred EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCC
Confidence 999999998765433 223344679999999999999999999999999999999999 8999964
No 4
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.5e-44 Score=391.03 Aligned_cols=215 Identities=29% Similarity=0.428 Sum_probs=181.1
Q ss_pred CCCCCCeeeccCceEEEEEEEc------CCcEEEEEEecccCc-hhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEE
Q 002899 639 NFDPANKVGEGGFGSVYKGILS------DGTVIAVKQLSSKSR-QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLL 711 (869)
Q Consensus 639 ~f~~~~~IG~G~fG~Vyka~~~------~g~~VAvK~~~~~~~-~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 711 (869)
++++.++||+|+||+||+|++. +++.||||+++.... ...++|.+|++++++++|||||+++|+|.+++..+|
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 3456789999999999999973 467899999976543 335789999999999999999999999999999999
Q ss_pred EEEeccCCchhhhhhcCCc-----------ccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCc
Q 002899 712 VYEYMKNNCLSRAIFGKDT-----------EYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLN 780 (869)
Q Consensus 712 V~E~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~ 780 (869)
|||||++|+|.++|+.... .....++|.++.+|+.|||+||+|||+++ ||||||||+||||++++.
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGC
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCccccceEECCCCC
Confidence 9999999999999975431 12346999999999999999999999987 999999999999999999
Q ss_pred EEEeecCCceeecCCC-ccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcchhhHHHHH
Q 002899 781 AKISDFGLAKLYEEDK-THISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNYRPNEDFVYLLDWA 858 (869)
Q Consensus 781 ~kl~DFGla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~~~~~~~l~~w~ 858 (869)
+||+|||+|+...... ........||++|||||++.++.++.++|||||||++|||+| |+.||... ...++++.+
T Consensus 184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~---~~~~~~~~i 260 (308)
T 4gt4_A 184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY---SNQDVVEMI 260 (308)
T ss_dssp EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTC---CHHHHHHHH
T ss_pred EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCC---CHHHHHHHH
Confidence 9999999998764432 222344679999999999999999999999999999999998 89999643 334555555
Q ss_pred H
Q 002899 859 Y 859 (869)
Q Consensus 859 ~ 859 (869)
.
T Consensus 261 ~ 261 (308)
T 4gt4_A 261 R 261 (308)
T ss_dssp H
T ss_pred H
Confidence 3
No 5
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.7e-44 Score=387.95 Aligned_cols=200 Identities=27% Similarity=0.419 Sum_probs=179.6
Q ss_pred cCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccC---chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEE
Q 002899 638 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 713 (869)
Q Consensus 638 ~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 713 (869)
++|++.++||+|+||+||+|+.. +++.||||++.... ....+.+.+|++++++++|||||++++++++++.+|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 46889999999999999999975 68999999986532 233567899999999999999999999999999999999
Q ss_pred EeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeec
Q 002899 714 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 793 (869)
Q Consensus 714 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~ 793 (869)
||+++|+|.+++...+ .+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+.+.
T Consensus 112 Ey~~gG~L~~~i~~~~-----~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDlKPeNILl~~~g~vKl~DFGla~~~~ 183 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIG-----SFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLS 183 (311)
T ss_dssp CCCTTEEHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred ecCCCCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEEcCCCCEEEEEcCCceecC
Confidence 9999999999996543 6899999999999999999999998 9999999999999999999999999999875
Q ss_pred CCCc-cccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 794 EDKT-HISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 794 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
.... ......+||+.|||||++.+..++.++||||+||++|||++|+.||..
T Consensus 184 ~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~ 236 (311)
T 4aw0_A 184 PESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 236 (311)
T ss_dssp TTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 4332 233457899999999999999999999999999999999999999964
No 6
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.5e-44 Score=394.74 Aligned_cols=201 Identities=25% Similarity=0.422 Sum_probs=173.3
Q ss_pred cCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEeccc--CchhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEEE
Q 002899 638 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSK--SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 714 (869)
Q Consensus 638 ~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 714 (869)
++|++.+.||+|+||+||+|+.. +|+.||||++... .....+.|.+|++++++++|||||++++++.+++.+|+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 67999999999999999999975 6899999998654 23345679999999999999999999999999999999999
Q ss_pred eccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeecC
Q 002899 715 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEE 794 (869)
Q Consensus 715 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~~ 794 (869)
|+++|+|.+++...+. ..+++.+++.++.||+.||+|||+++ ||||||||+||||+.++.+||+|||+|+....
T Consensus 104 y~~gg~L~~~i~~~~~---~~~~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 177 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKG---VLFQEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS 177 (350)
T ss_dssp CCTTCBHHHHHHHTTT---CCCCHHHHHHHHHHHHHHHHHHHHTT---CEETTCCGGGEEECTTCCEEECSTTEESCCCH
T ss_pred CCCCCcHHHHHHHcCC---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCCEEEcccccceeecC
Confidence 9999999999975432 25789999999999999999999998 99999999999999999999999999987653
Q ss_pred CCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 795 DKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 795 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
.. ......+||+.|||||++.+..++.++|||||||++|||++|+.||..
T Consensus 178 ~~-~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~ 227 (350)
T 4b9d_A 178 TV-ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEA 227 (350)
T ss_dssp HH-HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred Cc-ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 22 122346799999999999999999999999999999999999999964
No 7
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=3.8e-44 Score=386.19 Aligned_cols=199 Identities=28% Similarity=0.505 Sum_probs=168.3
Q ss_pred hcCCCCCCeeeccCceEEEEEEEcCCcEEEEEEeccc--CchhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSK--SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 714 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 714 (869)
.+++.+.++||+|+||+||+|++.+ .||||+++.. .....++|.+|++++++++|||||+++|++.+ +..+||||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE 111 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence 3567788999999999999998753 5899998654 33446789999999999999999999998865 56899999
Q ss_pred eccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeecC
Q 002899 715 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEE 794 (869)
Q Consensus 715 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~~ 794 (869)
||++|+|.++|+... ..++|.++..|+.|||+||+|||+++ ||||||||+||||++++.+||+|||+|+....
T Consensus 112 y~~gGsL~~~l~~~~----~~l~~~~~~~i~~qia~gL~yLH~~~---IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~ 184 (307)
T 3omv_A 112 WCEGSSLYKHLHVQE----TKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp CCSSCBHHHHHHTSC----CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCSSSEEEETTEEEEECCCSSCBC---
T ss_pred cCCCCCHHHHHhhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCccCHHHEEECCCCcEEEeeccCceeccc
Confidence 999999999997653 26899999999999999999999987 99999999999999999999999999987654
Q ss_pred CC-ccccccccccccccchhhccc---CCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 795 DK-THISTRIAGTIGYMAPEYAMR---GYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 795 ~~-~~~~~~~~gt~~y~aPE~~~~---~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
.. .......+||+.|||||++.. ..++.++|||||||++|||+||+.||..
T Consensus 185 ~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~ 239 (307)
T 3omv_A 185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSH 239 (307)
T ss_dssp ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred CCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCC
Confidence 32 222344689999999999864 4689999999999999999999999964
No 8
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.1e-43 Score=396.87 Aligned_cols=198 Identities=27% Similarity=0.519 Sum_probs=180.6
Q ss_pred cCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEEEec
Q 002899 638 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYM 716 (869)
Q Consensus 638 ~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~~ 716 (869)
+.|++.++||+|+||.||+|+.. +|+.||||++........+.+.+|+++|+.++|||||++++++.+++.+|||||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 56889999999999999999975 68999999997766666678999999999999999999999999999999999999
Q ss_pred cCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeecCCC
Q 002899 717 KNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEEDK 796 (869)
Q Consensus 717 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~ 796 (869)
++|+|.+++... .+++..+..++.||+.||+|||+++ ||||||||+||||+.++.+||+|||+|+.+....
T Consensus 231 ~gG~L~~~i~~~------~l~e~~~~~~~~qil~aL~ylH~~~---IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~ 301 (423)
T 4fie_A 231 EGGALTDIVTHT------RMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 301 (423)
T ss_dssp TTEEHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSTTTEEECTTCCEEECCCTTCEECCSSC
T ss_pred CCCcHHHHHhcc------CCCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEecCccceECCCCC
Confidence 999999998643 5899999999999999999999998 9999999999999999999999999998776543
Q ss_pred ccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 797 THISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 797 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
.. ....+||+.|||||++.+..|+.++|||||||++|||++|+.||..
T Consensus 302 ~~-~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~ 349 (423)
T 4fie_A 302 PR-RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN 349 (423)
T ss_dssp CC-BCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cc-ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 32 3356899999999999999999999999999999999999999964
No 9
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=3.5e-43 Score=375.90 Aligned_cols=195 Identities=28% Similarity=0.485 Sum_probs=168.8
Q ss_pred CCCCeeeccCceEEEEEEEc-CCcEEEEEEeccc--CchhhHHHHHHHHHHHhcCCCceeeEEeEEee----CceEEEEE
Q 002899 641 DPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSK--SRQGNREFVNEIGMISAQQHPNLVKLYGCCVE----GNQLLLVY 713 (869)
Q Consensus 641 ~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~----~~~~~lV~ 713 (869)
++.++||+|+||+||+|... +++.||+|++... .....+.|.+|++++++++|||||++++++.+ ++.+||||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 55678999999999999975 6889999998654 23345679999999999999999999999875 35689999
Q ss_pred EeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEc-CCCcEEEeecCCceee
Q 002899 714 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLD-KDLNAKISDFGLAKLY 792 (869)
Q Consensus 714 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~-~~~~~kl~DFGla~~~ 792 (869)
|||++|+|.+++.... .+++..+..++.||++||+|||+++ ++||||||||+||||+ .++.+||+|||+|+..
T Consensus 109 Ey~~gg~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~ 182 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFK-----VMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp ECCCSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred eCCCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEeC
Confidence 9999999999997543 6899999999999999999999985 3599999999999997 4799999999999764
Q ss_pred cCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 793 EEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 793 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
... .....+||+.|||||++.+ .++.++|||||||++|||+||+.||..
T Consensus 183 ~~~---~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~ 231 (290)
T 3fpq_A 183 RAS---FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSE 231 (290)
T ss_dssp CTT---SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred CCC---ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 332 2334689999999998865 699999999999999999999999954
No 10
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=2.6e-43 Score=383.35 Aligned_cols=196 Identities=29% Similarity=0.336 Sum_probs=170.9
Q ss_pred cCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEEEec
Q 002899 638 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYM 716 (869)
Q Consensus 638 ~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~~ 716 (869)
+.|.+.++||+|+||.||+|+.. +|+.||||+++... .+.+|++++++++|||||++++++.+++.+|||||||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~-----~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 132 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-----FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELL 132 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-----CCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHH-----hHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence 45777889999999999999975 68999999997542 2246999999999999999999999999999999999
Q ss_pred cCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCC-cEEEeecCCceeecCC
Q 002899 717 KNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDL-NAKISDFGLAKLYEED 795 (869)
Q Consensus 717 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~-~~kl~DFGla~~~~~~ 795 (869)
++|+|.+++...+ .+++..+..++.||+.||+|||+++ ||||||||+||||+.++ ++||+|||+|+.+...
T Consensus 133 ~gg~L~~~l~~~~-----~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~ 204 (336)
T 4g3f_A 133 EGGSLGQLIKQMG-----CLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPD 204 (336)
T ss_dssp TTCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCCGGGEEECTTSCCEEECCCTTCEEC---
T ss_pred CCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCC
Confidence 9999999996543 6899999999999999999999998 99999999999999987 6999999999987543
Q ss_pred Ccc----ccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 002899 796 KTH----ISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNYR 846 (869)
Q Consensus 796 ~~~----~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~ 846 (869)
... ....++||+.|||||++.+..++.++|||||||++|||++|+.||...
T Consensus 205 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~ 259 (336)
T 4g3f_A 205 GLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQY 259 (336)
T ss_dssp ---------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTT
T ss_pred CcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCC
Confidence 221 122357999999999999999999999999999999999999999653
No 11
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=8.1e-44 Score=382.71 Aligned_cols=199 Identities=27% Similarity=0.375 Sum_probs=169.6
Q ss_pred cCCCCCCeeeccCceEEEEEEEc----CCcEEEEEEecccC--chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEE
Q 002899 638 NNFDPANKVGEGGFGSVYKGILS----DGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLL 711 (869)
Q Consensus 638 ~~f~~~~~IG~G~fG~Vyka~~~----~g~~VAvK~~~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 711 (869)
++|++.+.||+|+||+||+|+.. .++.||||+++... .....++.+|++++++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 57999999999999999999862 46899999986542 2234568899999999999999999999999999999
Q ss_pred EEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCcee
Q 002899 712 VYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKL 791 (869)
Q Consensus 712 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~ 791 (869)
||||+++|+|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++++||+|||+|+.
T Consensus 104 vmEy~~gg~L~~~l~~~~-----~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~ 175 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV-----MFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKE 175 (304)
T ss_dssp EECCCTTCEEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTSCEEEESSEEEEC
T ss_pred EEEcCCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHeEEcCCCCEEeccccccee
Confidence 999999999999996543 6899999999999999999999998 99999999999999999999999999986
Q ss_pred ecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 792 YEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 792 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
...... .....+||+.|||||++.+..++.++||||+||++|||++|+.||..
T Consensus 176 ~~~~~~-~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~ 228 (304)
T 3ubd_A 176 SIDHEK-KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQG 228 (304)
T ss_dssp -----C-CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ccCCCc-cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCC
Confidence 543322 22346899999999999999999999999999999999999999964
No 12
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=7.2e-43 Score=370.21 Aligned_cols=197 Identities=29% Similarity=0.499 Sum_probs=161.8
Q ss_pred cCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccC---chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEE
Q 002899 638 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 713 (869)
Q Consensus 638 ~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 713 (869)
++|++.+.||+|+||+||+|+.. +|+.||||++.... ......+.+|++++++++|||||++++++.+++..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 68999999999999999999964 68999999986542 233467899999999999999999999999999999999
Q ss_pred EeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeec
Q 002899 714 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 793 (869)
Q Consensus 714 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~ 793 (869)
||+ +|+|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+|+...
T Consensus 93 Ey~-~g~L~~~l~~~~-----~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDiKP~NILl~~~~~vkl~DFGla~~~~ 163 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRD-----KMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMT 163 (275)
T ss_dssp ECC-CEEHHHHHHHSC-----SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTCCEEECCSSCC----
T ss_pred eCC-CCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---cccccCChHHeEECCCCCEEEeecCCCeecC
Confidence 999 578998886543 6899999999999999999999998 9999999999999999999999999998765
Q ss_pred CCCccccccccccccccchhhcccCCC-CchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 794 EDKTHISTRIAGTIGYMAPEYAMRGYL-TSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 794 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
... .....+||+.|||||++.+..+ +.++||||+||++|||++|+.||..
T Consensus 164 ~~~--~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~ 214 (275)
T 3hyh_A 164 DGN--FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 214 (275)
T ss_dssp -------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCC--ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCC
Confidence 432 2234689999999999988765 6899999999999999999999964
No 13
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3.6e-42 Score=372.88 Aligned_cols=197 Identities=30% Similarity=0.430 Sum_probs=162.7
Q ss_pred cCCCCCCeeeccCceEEEEEEEcCCcEEEEEEecccCchhhHHHH--HHHHHHHhcCCCceeeEEeEEeeCc----eEEE
Q 002899 638 NNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFV--NEIGMISAQQHPNLVKLYGCCVEGN----QLLL 711 (869)
Q Consensus 638 ~~f~~~~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~~~~~~~f~--~E~~~l~~l~H~nIv~l~~~~~~~~----~~~l 711 (869)
++|.+.++||+|+||+||+|++ +|+.||||+++... .+++. .|+..+.+++|||||++++++.+++ .++|
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~---~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~l 78 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc---hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEE
Confidence 3566788999999999999998 58999999996532 23344 4555567889999999999998754 5799
Q ss_pred EEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhc-----CCCCeEEcCCCCCCEEEcCCCcEEEeec
Q 002899 712 VYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHED-----SRIKIVHRDIKTSNVLLDKDLNAKISDF 786 (869)
Q Consensus 712 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-----~~~~iiH~Dlk~~NILl~~~~~~kl~DF 786 (869)
|||||++|+|.++++.. .++|+.+.+++.|+|+||+|||++ +.++||||||||+||||+.++++||+||
T Consensus 79 V~Ey~~~gsL~~~l~~~------~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DF 152 (303)
T 3hmm_A 79 VSDYHEHGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp EEECCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCC
T ss_pred EecCCCCCcHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeC
Confidence 99999999999999754 589999999999999999999986 2345999999999999999999999999
Q ss_pred CCceeecCCCccc---cccccccccccchhhcccC------CCCchhHHHHHHHHHHHHHcCCCCCC
Q 002899 787 GLAKLYEEDKTHI---STRIAGTIGYMAPEYAMRG------YLTSKADVYSFGVVTLEIVSGKSNTN 844 (869)
Q Consensus 787 Gla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~k~DvwSlGvil~elltG~~p~~ 844 (869)
|+|+......... ....+||+.|||||++.+. .++.++|||||||++|||+||++|+.
T Consensus 153 Gla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~ 219 (303)
T 3hmm_A 153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGG 219 (303)
T ss_dssp TTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTT
T ss_pred CCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCC
Confidence 9998876543322 2235799999999998754 46789999999999999999988764
No 14
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=2.7e-42 Score=379.88 Aligned_cols=215 Identities=27% Similarity=0.403 Sum_probs=182.6
Q ss_pred cHHHHHHHhcCCCCCCeeeccCceEEEEEEEcC------CcEEEEEEecccCc-hhhHHHHHHHHHHHhcCC-CceeeEE
Q 002899 629 TLRQIKAATNNFDPANKVGEGGFGSVYKGILSD------GTVIAVKQLSSKSR-QGNREFVNEIGMISAQQH-PNLVKLY 700 (869)
Q Consensus 629 ~~~~i~~~t~~f~~~~~IG~G~fG~Vyka~~~~------g~~VAvK~~~~~~~-~~~~~f~~E~~~l~~l~H-~nIv~l~ 700 (869)
...+++...++|++.++||+|+||+||+|.+.. ++.||||+++.... ...++|.+|++++.+++| ||||+++
T Consensus 55 ~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~ 134 (353)
T 4ase_A 55 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 134 (353)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEE
Confidence 344555567889999999999999999999642 36899999976543 345779999999999965 8999999
Q ss_pred eEEeeC-ceEEEEEEeccCCchhhhhhcCCcc-----------cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCC
Q 002899 701 GCCVEG-NQLLLVYEYMKNNCLSRAIFGKDTE-----------YRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDI 768 (869)
Q Consensus 701 ~~~~~~-~~~~lV~E~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dl 768 (869)
|+|.+. +.+++|||||++|+|.++|+..... ....++|.++..++.|||+||+|||+++ ||||||
T Consensus 135 g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~---iiHRDL 211 (353)
T 4ase_A 135 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL 211 (353)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCC
T ss_pred EEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC---eecCcc
Confidence 999764 5689999999999999999764321 1235899999999999999999999997 999999
Q ss_pred CCCCEEEcCCCcEEEeecCCceeecCCCcc-ccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHc-CCCCCCCC
Q 002899 769 KTSNVLLDKDLNAKISDFGLAKLYEEDKTH-ISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNYR 846 (869)
Q Consensus 769 k~~NILl~~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~ 846 (869)
||+|||+++++.+||+|||+|+........ ......||+.|||||++.+..++.++|||||||++|||+| |+.||...
T Consensus 212 K~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~ 291 (353)
T 4ase_A 212 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 291 (353)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred CccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCC
Confidence 999999999999999999999876544332 2334678999999999999999999999999999999998 99999653
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=2.9e-41 Score=364.11 Aligned_cols=199 Identities=26% Similarity=0.484 Sum_probs=162.1
Q ss_pred cCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCc-hhhHHHHHHHHHHHhcCCCceeeEEeEEeeCc--------
Q 002899 638 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR-QGNREFVNEIGMISAQQHPNLVKLYGCCVEGN-------- 707 (869)
Q Consensus 638 ~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~-~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~-------- 707 (869)
++|++.+.||+|+||+||+|+.. +|+.||||+++.... ...+.+.+|++++++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 35889999999999999999975 689999999865443 34567899999999999999999999987644
Q ss_pred ----eEEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEE
Q 002899 708 ----QLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKI 783 (869)
Q Consensus 708 ----~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl 783 (869)
.+|+||||+++|+|.+++..... ....++..++.++.||++||+|||+++ |+||||||+|||++.++.+||
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~al~ylH~~~---IiHRDlKp~NILl~~~~~vKl 159 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCT--IEERERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKV 159 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCS--GGGSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEE
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCC--CChhHHHHHHHHHHHHHHHHHHHHHCc---CccccCcHHHeEECCCCcEEE
Confidence 36999999999999999976542 224677889999999999999999998 999999999999999999999
Q ss_pred eecCCceeecCCCcc-----------ccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCC
Q 002899 784 SDFGLAKLYEEDKTH-----------ISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTN 844 (869)
Q Consensus 784 ~DFGla~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~ 844 (869)
+|||+|+........ ..+..+||+.|||||++.+..++.++|||||||++|||++ ||.
T Consensus 160 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~ 228 (299)
T 4g31_A 160 GDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFS 228 (299)
T ss_dssp CCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCS
T ss_pred ccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCC
Confidence 999999877543211 1123579999999999999999999999999999999996 664
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.9e-40 Score=368.11 Aligned_cols=200 Identities=22% Similarity=0.379 Sum_probs=171.9
Q ss_pred cCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccC--chhhHHHHHHHHHHHhcCCCceeeEEeEEee------Cce
Q 002899 638 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVE------GNQ 708 (869)
Q Consensus 638 ~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~------~~~ 708 (869)
++|++.+.||+|+||+||+|+.. +|+.||||+++... ....+.+.+|+++|+.++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 57899999999999999999975 78999999997543 2335678899999999999999999998764 357
Q ss_pred EEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCC
Q 002899 709 LLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGL 788 (869)
Q Consensus 709 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGl 788 (869)
+|||||||+ |+|.+++.... .+++..+..++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~-----~l~~~~~~~~~~qil~al~ylH~~~---iiHRDlKP~NIl~~~~~~~Ki~DFGl 204 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQ-----PLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGM 204 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSS-----CCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEEeCCC-CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCc---CcCCCcCccccccCCCCCEEEeecce
Confidence 899999996 67999886543 6899999999999999999999998 99999999999999999999999999
Q ss_pred ceeecCCC---ccccccccccccccchhhcccC-CCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 002899 789 AKLYEEDK---THISTRIAGTIGYMAPEYAMRG-YLTSKADVYSFGVVTLEIVSGKSNTNYR 846 (869)
Q Consensus 789 a~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~ 846 (869)
|+.+.... .......+||+.|||||++.+. .++.++||||+||++|||++|++||...
T Consensus 205 a~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~ 266 (398)
T 4b99_A 205 ARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGK 266 (398)
T ss_dssp CBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCS
T ss_pred eeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCC
Confidence 98764322 1223346899999999998765 5799999999999999999999999654
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=2.1e-39 Score=359.03 Aligned_cols=199 Identities=26% Similarity=0.418 Sum_probs=171.4
Q ss_pred HHHhcCCCCCCeeeccCceEEEEEEEc----CCcEEEEEEecccCchhhHHHHHHHHHHHhc-CCCceeeEEeEEeeCce
Q 002899 634 KAATNNFDPANKVGEGGFGSVYKGILS----DGTVIAVKQLSSKSRQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQ 708 (869)
Q Consensus 634 ~~~t~~f~~~~~IG~G~fG~Vyka~~~----~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l-~H~nIv~l~~~~~~~~~ 708 (869)
....++|++.++||+|+||+||+|+.+ .++.||||++.... ...++.+|++++..+ +|||||++++++.+.+.
T Consensus 17 p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~ 94 (361)
T 4f9c_A 17 PQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDH 94 (361)
T ss_dssp GGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTE
T ss_pred CCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCE
Confidence 345688999999999999999999853 46789999986543 345688999999988 69999999999999999
Q ss_pred EEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCC-CcEEEeecC
Q 002899 709 LLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKD-LNAKISDFG 787 (869)
Q Consensus 709 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~-~~~kl~DFG 787 (869)
.|+||||+++|+|.+++. .+++.+++.++.|++.||+|||+++ |+||||||+|||++.+ +.+||+|||
T Consensus 95 ~~lvmE~~~g~~L~~~~~--------~l~~~~~~~~~~qll~al~ylH~~g---IiHRDiKPeNiLl~~~~~~~kl~DFG 163 (361)
T 4f9c_A 95 VVIAMPYLEHESFLDILN--------SLSFQEVREYMLNLFKALKRIHQFG---IVHRDVKPSNFLYNRRLKKYALVDFG 163 (361)
T ss_dssp EEEEEECCCCCCHHHHHT--------TCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCT
T ss_pred EEEEEeCCCcccHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCcCCHHHeEEeCCCCeEEECcCC
Confidence 999999999999999882 4789999999999999999999998 9999999999999877 799999999
Q ss_pred CceeecCCCcc---------------------------ccccccccccccchhhcccC-CCCchhHHHHHHHHHHHHHcC
Q 002899 788 LAKLYEEDKTH---------------------------ISTRIAGTIGYMAPEYAMRG-YLTSKADVYSFGVVTLEIVSG 839 (869)
Q Consensus 788 la~~~~~~~~~---------------------------~~~~~~gt~~y~aPE~~~~~-~~~~k~DvwSlGvil~elltG 839 (869)
+|+........ .....+||+.|+|||++.+. .++.++||||+||++|||++|
T Consensus 164 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G 243 (361)
T 4f9c_A 164 LAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSG 243 (361)
T ss_dssp TCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHT
T ss_pred CCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHC
Confidence 99866432211 11235799999999999775 589999999999999999999
Q ss_pred CCCCCC
Q 002899 840 KSNTNY 845 (869)
Q Consensus 840 ~~p~~~ 845 (869)
+.||..
T Consensus 244 ~~Pf~~ 249 (361)
T 4f9c_A 244 RYPFYK 249 (361)
T ss_dssp CSSSSC
T ss_pred CCCCCC
Confidence 999954
No 18
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.6e-39 Score=378.83 Aligned_cols=207 Identities=28% Similarity=0.399 Sum_probs=175.2
Q ss_pred cCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccC---chhhHHHH---HHHHHHHhcCCCceeeEEeEEeeCceEE
Q 002899 638 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFV---NEIGMISAQQHPNLVKLYGCCVEGNQLL 710 (869)
Q Consensus 638 ~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~---~~~~~~f~---~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 710 (869)
++|++.++||+|+||.||+|+.. +|+.||||++.... ......+. .++.+++.++|||||++++++.+.+.+|
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly 268 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence 57899999999999999999976 68999999986432 11122233 3456677789999999999999999999
Q ss_pred EEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCce
Q 002899 711 LVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAK 790 (869)
Q Consensus 711 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~ 790 (869)
+||||+++|+|.++|.... .+++..++.++.||+.||+|||+++ ||||||||+||||+.+|++||+|||+|+
T Consensus 269 lVmEy~~GGdL~~~l~~~~-----~l~E~~a~~y~~qIl~aL~yLH~~g---IiHRDLKPeNILld~~G~vKL~DFGlA~ 340 (689)
T 3v5w_A 269 FILDLMNGGDLHYHLSQHG-----VFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLAC 340 (689)
T ss_dssp EEECCCCSCBHHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEecCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHeEEeCCCCEEecccceee
Confidence 9999999999999996543 6899999999999999999999998 9999999999999999999999999998
Q ss_pred eecCCCccccccccccccccchhhccc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcchhhHH
Q 002899 791 LYEEDKTHISTRIAGTIGYMAPEYAMR-GYLTSKADVYSFGVVTLEIVSGKSNTNYRPNEDFVYLL 855 (869)
Q Consensus 791 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~l~ 855 (869)
.+..... ...+||+.|||||++.. ..++.++||||+||++|||++|++||......+...+.
T Consensus 341 ~~~~~~~---~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~ 403 (689)
T 3v5w_A 341 DFSKKKP---HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID 403 (689)
T ss_dssp ECSSCCC---CSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHH
T ss_pred ecCCCCC---CCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence 7754332 34689999999999975 57999999999999999999999999754333333333
No 19
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=6.7e-39 Score=349.87 Aligned_cols=285 Identities=27% Similarity=0.451 Sum_probs=251.1
Q ss_pred cHHHHHHHHHHhCC----CCCCCCCCCCCCCCCccccCCCCCCCCcceEecCCCCcceEEEEeccCCCccc--cCCcccc
Q 002899 2 PKKALKQIGRKLGK----KDWNFGVDPCSQKGNWELSSDDKKGFESNVTCDCSSATCHVVTIALKAQNLTG--TLPTELS 75 (869)
Q Consensus 2 ~~~~l~~~~~~l~~----~~W~~~~d~C~~~g~w~~~~~~~~~~~~~v~C~~~~~~~~v~~L~l~~~~l~~--~~p~~l~ 75 (869)
+++||+++|+.+++ .+|..+.|||. +.|. ||+|+......+|+.|+|+++++++ .+|..|.
T Consensus 7 ~~~aL~~~k~~~~~~~~l~~W~~~~~~C~--~~w~-----------gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~ 73 (313)
T 1ogq_A 7 DKQALLQIKKDLGNPTTLSSWLPTTDCCN--RTWL-----------GVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLA 73 (313)
T ss_dssp HHHHHHHHHHHTTCCGGGTTCCTTSCTTT--TCST-----------TEEECCSSSCCCEEEEEEECCCCSSCEECCGGGG
T ss_pred HHHHHHHHHHhcCCcccccCCCCCCCCCc--CCCc-----------ceEeCCCCCCceEEEEECCCCCccCCcccChhHh
Confidence 46899999999976 47988889996 1243 5999865545799999999999999 9999999
Q ss_pred CCCCCCEEEeec-CcCCCCCchhhccc-cceEEEeecccCCCCCchhhcCccccccccccccccCCCCCccccCCCCccE
Q 002899 76 KLRYLKQLDLSR-NCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQK 153 (869)
Q Consensus 76 ~l~~L~~L~Ls~-N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 153 (869)
++++|++|+|++ |.+.+.+|..|..+ +|++|+|++|++++.+|..|..+++|++|+|++|.+++.+|..|..+++|++
T Consensus 74 ~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 153 (313)
T 1ogq_A 74 NLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVG 153 (313)
T ss_dssp GCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCE
T ss_pred CCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCe
Confidence 999999999995 99999999988888 8999999999999999999999999999999999999999999999999999
Q ss_pred EEeecccccccCCccccCCC-CCCeEeccCCcCCCCCccccCCCCcccEEEccCCcCCCCchHhhhcCCCCCEEEcCCCC
Q 002899 154 LILSSNSFTGELPAELTKLT-NLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLK 232 (869)
Q Consensus 154 L~Ls~N~i~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~ 232 (869)
|+|++|++++.+|..+..++ +|++|+|++|++++.+|..|..++ |+.|+|++|.+++..|..+..+++|+.|+|++
T Consensus 154 L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~-- 230 (313)
T 1ogq_A 154 ITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAK-- 230 (313)
T ss_dssp EECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCS--
T ss_pred EECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCC--
Confidence 99999999999999999998 999999999999999999999987 99999999999998999999988888777764
Q ss_pred CCCCcccccccccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCCCchhhhcCCCCCEEEeeCCcCCCCCchhh
Q 002899 233 GSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYI 312 (869)
Q Consensus 233 ~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 312 (869)
|++++.+|. +..+++|++|+|++|+|++.+|..|..+++|+.|+|++|+++|.+|..-
T Consensus 231 ---------------------N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~ 288 (313)
T 1ogq_A 231 ---------------------NSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGG 288 (313)
T ss_dssp ---------------------SEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCST
T ss_pred ---------------------CceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCc
Confidence 555544444 6678889999999999988888889899999999999999988888754
Q ss_pred -hccCCceeeecc
Q 002899 313 -FNSNKNVDISLN 324 (869)
Q Consensus 313 -~~~l~~l~ls~N 324 (869)
+..++.+++++|
T Consensus 289 ~l~~L~~l~l~~N 301 (313)
T 1ogq_A 289 NLQRFDVSAYANN 301 (313)
T ss_dssp TGGGSCGGGTCSS
T ss_pred cccccChHHhcCC
Confidence 567888888888
No 20
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=2.1e-38 Score=372.17 Aligned_cols=200 Identities=25% Similarity=0.408 Sum_probs=180.1
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEEEe
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEY 715 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~ 715 (869)
.++|++.+.||+|+||.||+|+.. +|+.||+|++........+.+.+|+++|+.++|||||++++++.+++.+|+||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 368999999999999999999975 6899999999776666667889999999999999999999999999999999999
Q ss_pred ccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCC--CcEEEeecCCceeec
Q 002899 716 MKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKD--LNAKISDFGLAKLYE 793 (869)
Q Consensus 716 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~--~~~kl~DFGla~~~~ 793 (869)
|++|+|.+++.... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.+ +.+||+|||+|+.+.
T Consensus 236 ~~gg~L~~~i~~~~----~~l~e~~~~~~~~qi~~al~ylH~~~---iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~ 308 (573)
T 3uto_A 236 MSGGELFEKVADEH----NKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 308 (573)
T ss_dssp CCCCBHHHHHTCTT----SCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCSSCEECC
T ss_pred cCCCcHHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhccccCCCCCCEEEeeccceeEcc
Confidence 99999999886543 25899999999999999999999998 9999999999999854 899999999999876
Q ss_pred CCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 794 EDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 794 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
.... ....+||+.|||||++.+..++.++||||+||++|||++|++||..
T Consensus 309 ~~~~--~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~ 358 (573)
T 3uto_A 309 PKQS--VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGG 358 (573)
T ss_dssp TTSE--EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred CCCc--eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 4432 2345799999999999999999999999999999999999999964
No 21
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.7e-37 Score=352.92 Aligned_cols=210 Identities=25% Similarity=0.341 Sum_probs=183.4
Q ss_pred cHHHHHHHhcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccC---chhhHHHHHHHHHHHhcCCCceeeEEeEEe
Q 002899 629 TLRQIKAATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCV 704 (869)
Q Consensus 629 ~~~~i~~~t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~ 704 (869)
.++++...+++|++.++||+|+||+||+|+.. +++.||||+++... ......+.+|++++..++||||+++++++.
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 34555566789999999999999999999986 47899999986532 222345889999999999999999999999
Q ss_pred eCceEEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEe
Q 002899 705 EGNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKIS 784 (869)
Q Consensus 705 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~ 784 (869)
+++..++||||+++|+|.+++.... ..+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+
T Consensus 145 ~~~~~~lV~Ey~~gg~L~~~l~~~~----~~l~e~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILl~~~g~vkL~ 217 (437)
T 4aw2_A 145 DDNNLYLVMDYYVGGDLLTLLSKFE----DRLPEEMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLA 217 (437)
T ss_dssp CSSEEEEEECCCTTCBHHHHHHTTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEEC
T ss_pred eCCEEEEEEecCCCCcHHHHHHHcc----CCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeeEcCCCCEEEc
Confidence 9999999999999999999997632 26899999999999999999999998 9999999999999999999999
Q ss_pred ecCCceeecCCCccccccccccccccchhhcc-----cCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 785 DFGLAKLYEEDKTHISTRIAGTIGYMAPEYAM-----RGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 785 DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
|||+++.............+||+.|+|||++. ...++.++|||||||++|||++|+.||..
T Consensus 218 DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~ 283 (437)
T 4aw2_A 218 DFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYA 283 (437)
T ss_dssp CCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred chhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCC
Confidence 99999877654444444568999999999987 56789999999999999999999999965
No 22
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=5.6e-37 Score=335.92 Aligned_cols=227 Identities=46% Similarity=0.814 Sum_probs=196.5
Q ss_pred HHHHHHHhcCCCCCCeeeccCceEEEEEEEcCCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceE
Q 002899 630 LRQIKAATNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQL 709 (869)
Q Consensus 630 ~~~i~~~t~~f~~~~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 709 (869)
+.++..++++|++.+.||+|+||.||+|...+++.||||++........+.+.+|+++++.++||||+++++++.+.+..
T Consensus 31 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 110 (321)
T 2qkw_B 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEM 110 (321)
T ss_dssp CSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCC
T ss_pred HHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeE
Confidence 33445578899999999999999999999888999999998877666678899999999999999999999999999999
Q ss_pred EEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCc
Q 002899 710 LLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLA 789 (869)
Q Consensus 710 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla 789 (869)
++||||+++|+|.+++..... ....++|..+..++.|+++||+|||+++ |+||||||+|||++.++.+||+|||++
T Consensus 111 ~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 186 (321)
T 2qkw_B 111 ILIYKYMENGNLKRHLYGSDL-PTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGIS 186 (321)
T ss_dssp EEEEECCTTCBTGGGSSSSCC-CSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCSTTEEECTTCCEEECCCTTC
T ss_pred EEEEEcCCCCcHHHHHhccCC-CccccCHHHHHHHHHHHHHHHHHhcCCC---eecCCCCHHHEEECCCCCEEEeecccc
Confidence 999999999999999866532 2336899999999999999999999997 999999999999999999999999999
Q ss_pred eeecCCC-ccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcchhhHHHHHHH
Q 002899 790 KLYEEDK-THISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNYRPNEDFVYLLDWAYV 860 (869)
Q Consensus 790 ~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~l~~w~~~ 860 (869)
....... ........||+.|+|||++.+..++.++||||||+++|||++|+.||......+...+.+|...
T Consensus 187 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~ 258 (321)
T 2qkw_B 187 KKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVE 258 (321)
T ss_dssp EECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHH
T ss_pred cccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhh
Confidence 8754322 2223345689999999999988999999999999999999999999976555556666777643
No 23
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=7.8e-37 Score=335.40 Aligned_cols=235 Identities=44% Similarity=0.807 Sum_probs=199.2
Q ss_pred CcccHHHHHHHhcCCCCCCeeeccCceEEEEEEEcCCcEEEEEEecccCch-hhHHHHHHHHHHHhcCCCceeeEEeEEe
Q 002899 626 GLYTLRQIKAATNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQ-GNREFVNEIGMISAQQHPNLVKLYGCCV 704 (869)
Q Consensus 626 ~~~~~~~i~~~t~~f~~~~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~~~-~~~~f~~E~~~l~~l~H~nIv~l~~~~~ 704 (869)
..++++++..++++|++.+.||+|+||.||+|...+++.||||++...... ....+.+|+++++.++||||+++++++.
T Consensus 18 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 97 (326)
T 3uim_A 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 97 (326)
T ss_dssp EECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEEC
T ss_pred ceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEe
Confidence 467889999999999999999999999999999888999999998765332 3447899999999999999999999999
Q ss_pred eCceEEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEe
Q 002899 705 EGNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKIS 784 (869)
Q Consensus 705 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~ 784 (869)
..+..++||||+++|+|.+++..... ....+++..+..++.|++.||+|||+...++|+||||||+|||++.++.+||+
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~ 176 (326)
T 3uim_A 98 TPTERLLVYPYMANGSVASCLRERPE-SQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 176 (326)
T ss_dssp CSSCCEEEEECCTTCBHHHHHHCCST-TCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEEC
T ss_pred cCCceEEEEEeccCCCHHHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEec
Confidence 99999999999999999999976532 33469999999999999999999999832239999999999999999999999
Q ss_pred ecCCceeecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCCC--CCcchhhHHHHHHHh
Q 002899 785 DFGLAKLYEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNYR--PNEDFVYLLDWAYVL 861 (869)
Q Consensus 785 DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~--~~~~~~~l~~w~~~~ 861 (869)
|||++...............||+.|+|||++.+..++.++||||||+++|||++|+.||... ...+...+.+|+...
T Consensus 177 Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 255 (326)
T 3uim_A 177 DFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 255 (326)
T ss_dssp CCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTT
T ss_pred cCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHH
Confidence 99999887655444445567999999999998888999999999999999999999999631 123344455565443
No 24
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-36 Score=352.06 Aligned_cols=310 Identities=18% Similarity=0.202 Sum_probs=250.8
Q ss_pred cceEEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhhcCcccccccc
Q 002899 53 TCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLS 131 (869)
Q Consensus 53 ~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 131 (869)
..+++.|+|++|++++..+..|.++++|++|+|++|.|++..+..|..+ +|++|+|++|+++.+.+..|.++++|++|+
T Consensus 31 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 110 (477)
T 2id5_A 31 PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLD 110 (477)
T ss_dssp CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEE
T ss_pred CCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEE
Confidence 4578999999999999889999999999999999999999999999888 899999999999988888899999999999
Q ss_pred ccccccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcCCC
Q 002899 132 IEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEG 211 (869)
Q Consensus 132 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 211 (869)
|++|++++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|+.|+|++|.+.+
T Consensus 111 Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~ 190 (477)
T 2id5_A 111 ISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINA 190 (477)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCE
T ss_pred CCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcE
Confidence 99999998888899999999999999999998888899999999999999999998877889999999999999999988
Q ss_pred CchHhhhcCCCCCEEEcCCCC------------------------CCCCcccccc-cccceEEEcccccCccCCCcccCC
Q 002899 212 PIPASISALTSLTDLRISDLK------------------------GSESAFPKLD-KMNLKTLILTKCLIHGEIPDYIGD 266 (869)
Q Consensus 212 ~~~~~l~~l~~L~~L~L~~n~------------------------~~~~~~~~~~-~~~L~~L~Ls~N~i~~~~p~~~~~ 266 (869)
..+..|..+++|+.|+|++|. ++..+...+. ..+|+.|+|++|.|++..+..|..
T Consensus 191 ~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 270 (477)
T 2id5_A 191 IRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHE 270 (477)
T ss_dssp ECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTT
T ss_pred eChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccc
Confidence 777778777777777776654 3333222222 236777777777777777777777
Q ss_pred CCCcCEEeccCCCCCCCCchhhhcCCCCCEEEeeCCcCCCCCchhh--hccCCceeeeccCccCCCCCCCCCCCCCccce
Q 002899 267 MTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYI--FNSNKNVDISLNNFTWESSDPIECPRGSVNLV 344 (869)
Q Consensus 267 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~--~~~l~~l~ls~N~~~~~~~~p~~C~c~~~~~~ 344 (869)
+++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+..+ ...++.|+|++| ||.|||.+.|+.
T Consensus 271 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N--------~l~c~c~~~~~~ 342 (477)
T 2id5_A 271 LLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSN--------PLACDCRLLWVF 342 (477)
T ss_dssp CTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSS--------CEECSGGGHHHH
T ss_pred cccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCC--------CccCccchHhHH
Confidence 7777777777777777777777777777777777777776555444 456777777777 999999999988
Q ss_pred eccCCCCCCCCCCcCccCCCCCCCCCccccccee
Q 002899 345 ESYSSPRNKLDKVHPCLRQNFPCSAPADQYHYTL 378 (869)
Q Consensus 345 ~~l~~~~~~~~~~~~~~~~~~~C~~p~~~~~~~~ 378 (869)
.|..... . ......|+.|...++..+
T Consensus 343 ~~~~~~~--~------~~~~~~C~~p~~~~g~~l 368 (477)
T 2id5_A 343 RRRWRLN--F------NRQQPTCATPEFVQGKEF 368 (477)
T ss_dssp TTTTSSC--C------TTCCCBEEESGGGTTCBG
T ss_pred hhhhccc--c------CccCceeCCchHHcCCch
Confidence 7753211 1 113457888887777654
No 25
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1e-36 Score=343.99 Aligned_cols=207 Identities=24% Similarity=0.345 Sum_probs=181.0
Q ss_pred HHHHHHHhcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccC---chhhHHHHHHHHHHHhcCCCceeeEEeEEee
Q 002899 630 LRQIKAATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVE 705 (869)
Q Consensus 630 ~~~i~~~t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~ 705 (869)
++++....++|++.++||+|+||.||+|+.. +++.||+|+++... ......+.+|+++++.++|||||++++++.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 3445556789999999999999999999976 58899999986532 2234468899999999999999999999999
Q ss_pred CceEEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEee
Q 002899 706 GNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISD 785 (869)
Q Consensus 706 ~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~D 785 (869)
++..++||||+++|+|.+++... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++++||+|
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~~~------~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~D 211 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMSNY------DVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLAD 211 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECC
T ss_pred CCEEEEEEeCCCCCcHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeeECCCCCEEEec
Confidence 99999999999999999988643 4799999999999999999999998 99999999999999999999999
Q ss_pred cCCceeecCCCccccccccccccccchhhcccCC----CCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 786 FGLAKLYEEDKTHISTRIAGTIGYMAPEYAMRGY----LTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 786 FGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
||+++.............+||+.|+|||++.... ++.++|||||||++|||++|+.||..
T Consensus 212 FG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~ 275 (410)
T 3v8s_A 212 FGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 275 (410)
T ss_dssp CTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred cceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCC
Confidence 9999877654433334568999999999997654 78999999999999999999999964
No 26
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=8.2e-36 Score=323.01 Aligned_cols=199 Identities=26% Similarity=0.530 Sum_probs=179.7
Q ss_pred hcCCCCCCeeeccCceEEEEEEE-cCCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEEEe
Q 002899 637 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEY 715 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~-~~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~ 715 (869)
.++|++.+.||+|+||.||+|.. .+++.||||++........+.+.+|+.+++.++||||+++++++..++..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 46799999999999999999996 46899999998766655667889999999999999999999999999999999999
Q ss_pred ccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeecCC
Q 002899 716 MKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEED 795 (869)
Q Consensus 716 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~ 795 (869)
+++|+|.+++... .+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 99 ~~~~~L~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 169 (297)
T 3fxz_A 99 LAGGSLTDVVTET------CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 169 (297)
T ss_dssp CTTCBHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCST
T ss_pred CCCCCHHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEECCCCCEEEeeCCCceecCCc
Confidence 9999999998653 4899999999999999999999998 999999999999999999999999999877544
Q ss_pred CccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 796 KTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 796 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
... .....||+.|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus 170 ~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 218 (297)
T 3fxz_A 170 QSK-RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLN 218 (297)
T ss_dssp TCC-BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred ccc-cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 332 2345799999999999999999999999999999999999999964
No 27
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=1.2e-35 Score=325.41 Aligned_cols=214 Identities=30% Similarity=0.506 Sum_probs=186.8
Q ss_pred cccCCcccHHHHHHHhcC----------CCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCchhhHHHHHHHHHHHh
Q 002899 622 DLQTGLYTLRQIKAATNN----------FDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISA 690 (869)
Q Consensus 622 ~~~~~~~~~~~i~~~t~~----------f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~ 690 (869)
..+.+.++.++++.+++. |+..+.||+|+||.||+|+.. +|+.||||++........+.+.+|++++++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~ 98 (321)
T 2c30_A 19 YFQSGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRD 98 (321)
T ss_dssp ------CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTT
T ss_pred eecCCcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHh
Confidence 334567888888888765 667789999999999999986 789999999987666667789999999999
Q ss_pred cCCCceeeEEeEEeeCceEEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCC
Q 002899 691 QQHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKT 770 (869)
Q Consensus 691 l~H~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~ 770 (869)
++||||+++++++...+..++||||+++|+|.+++... .+++..+..++.|+++||+|||+.+ |+||||||
T Consensus 99 l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~------~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp 169 (321)
T 2c30_A 99 YQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV------RLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKS 169 (321)
T ss_dssp CCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSG
T ss_pred CCCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCH
Confidence 99999999999999999999999999999999988543 5899999999999999999999997 99999999
Q ss_pred CCEEEcCCCcEEEeecCCceeecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 771 SNVLLDKDLNAKISDFGLAKLYEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 771 ~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
+|||++.++.+||+|||++......... .....||+.|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus 170 ~NIll~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~ 243 (321)
T 2c30_A 170 DSILLTLDGRVKLSDFGFCAQISKDVPK-RKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFS 243 (321)
T ss_dssp GGEEECTTCCEEECCCTTCEECCSSSCC-BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred HHEEECCCCcEEEeeeeeeeecccCccc-cccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999876543322 2345799999999999999999999999999999999999999964
No 28
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.9e-36 Score=362.34 Aligned_cols=321 Identities=19% Similarity=0.265 Sum_probs=262.1
Q ss_pred cHHHHHHHHHHhCCCCCCCCCCCCCCCCCccccCCCCCCC--CcceEecCCCCcceEEEEeccCCCccccCCccccCCCC
Q 002899 2 PKKALKQIGRKLGKKDWNFGVDPCSQKGNWELSSDDKKGF--ESNVTCDCSSATCHVVTIALKAQNLTGTLPTELSKLRY 79 (869)
Q Consensus 2 ~~~~l~~~~~~l~~~~W~~~~d~C~~~g~w~~~~~~~~~~--~~~v~C~~~~~~~~v~~L~l~~~~l~~~~p~~l~~l~~ 79 (869)
+++||..|+..++...|....++|.....|... .+.+.| +.||+|+.. +||+.|+|++++++|.+|++|+++++
T Consensus 31 d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~-~~~c~w~~~~GV~C~~~---~~V~~L~L~~~~l~g~lp~~l~~L~~ 106 (636)
T 4eco_A 31 DYLALKEIWDALNGKNWSQQGFGTQPGANWNFN-KELDMWGAQPGVSLNSN---GRVTGLSLEGFGASGRVPDAIGQLTE 106 (636)
T ss_dssp HHHHHHHHHHHTTGGGCCCCC------CCCCCS-SCGGGTTCCTTEEECTT---CCEEEEECTTSCCEEEECGGGGGCTT
T ss_pred HHHHHHHHHHHcCCCCcccCCcCCccCCCCCCC-CCcccccCCCCeEEcCC---CCEEEEEecCcccCCcCChHHhcCcc
Confidence 468999999999999998877777665568743 333333 278999754 79999999999999999999999999
Q ss_pred CCEEEeecCcC---------------------------------------------------------------------
Q 002899 80 LKQLDLSRNCL--------------------------------------------------------------------- 90 (869)
Q Consensus 80 L~~L~Ls~N~i--------------------------------------------------------------------- 90 (869)
|++|+|++|.+
T Consensus 107 L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~l 186 (636)
T 4eco_A 107 LEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDT 186 (636)
T ss_dssp CCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCTT
T ss_pred ceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhhh
Confidence 99999999944
Q ss_pred ---------CCCCchhhccc-cceEEEeecccCCCC-----------------Cchhhc--CccccccccccccccCCCC
Q 002899 91 ---------TGSFSPQWASL-QLVELSVMGNRLSGP-----------------FPKVLT--NITTLKNLSIEGNLFTGSI 141 (869)
Q Consensus 91 ---------~~~~~~~~~~l-~L~~L~Ls~N~l~~~-----------------~~~~~~--~l~~L~~L~Ls~N~l~~~~ 141 (869)
++ +|..+..+ +|++|+|++|++++. +|..++ ++++|++|+|++|++.+.+
T Consensus 187 ~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~ 265 (636)
T 4eco_A 187 QIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKL 265 (636)
T ss_dssp TTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSC
T ss_pred hhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccC
Confidence 34 56667776 899999999999985 888888 9999999999999999999
Q ss_pred CccccCCCCccEEEeeccc-ccc-cCCccccCC------CCCCeEeccCCcCCCCCcc--ccCCCCcccEEEccCCcCCC
Q 002899 142 PPDIRKLINLQKLILSSNS-FTG-ELPAELTKL------TNLNDLRISDNNFSGKIPE--FIGKWKKIQKLHIQGSSLEG 211 (869)
Q Consensus 142 ~~~~~~l~~L~~L~Ls~N~-i~~-~~p~~~~~l------~~L~~L~Ls~N~l~~~~~~--~~~~l~~L~~L~L~~N~l~~ 211 (869)
|..|.++++|++|+|++|+ +++ .+|..+..+ ++|++|+|++|+++ .+|. .|+++++|+.|+|++|+++|
T Consensus 266 p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g 344 (636)
T 4eco_A 266 PTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEG 344 (636)
T ss_dssp CTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEE
T ss_pred hHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCcc
Confidence 9999999999999999998 988 788888776 89999999999998 7787 89999999999999999998
Q ss_pred CchHhhhcCCCCCEEEcCCCCCCCCccccccccc-ceEEEcccccCccCCCcccCCCC--CcCEEeccCCCCCCCCchhh
Q 002899 212 PIPASISALTSLTDLRISDLKGSESAFPKLDKMN-LKTLILTKCLIHGEIPDYIGDMT--KLKNIDLSFNNLTGGIPTTF 288 (869)
Q Consensus 212 ~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~-L~~L~Ls~N~i~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~p~~~ 288 (869)
.+| .+..+++|+.|+|++|.++..+.......+ |+.|+|++|+++ .+|..+..++ +|+.|+|++|++++.+|..+
T Consensus 345 ~ip-~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l 422 (636)
T 4eco_A 345 KLP-AFGSEIKLASLNLAYNQITEIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNF 422 (636)
T ss_dssp ECC-CCEEEEEESEEECCSSEEEECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSS
T ss_pred chh-hhCCCCCCCEEECCCCccccccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhh
Confidence 788 888888888888888888755544444446 888888888888 6777776654 78888888888888888877
Q ss_pred h-------cCCCCCEEEeeCCcCCCCCchhh---hccCCceeeeccCccCCCC
Q 002899 289 E-------KLAKTNFMYLTGNKLTGPVPKYI---FNSNKNVDISLNNFTWESS 331 (869)
Q Consensus 289 ~-------~l~~L~~L~Ls~N~l~~~~p~~~---~~~l~~l~ls~N~~~~~~~ 331 (869)
. .+++|+.|+|++|+++ .+|..+ +..++.|+|++|.++..+.
T Consensus 423 ~~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~l~~L~~L~Ls~N~l~~i~~ 474 (636)
T 4eco_A 423 DPLDPTPFKGINVSSINLSNNQIS-KFPKELFSTGSPLSSINLMGNMLTEIPK 474 (636)
T ss_dssp CTTCSSCCCCCCEEEEECCSSCCC-SCCTHHHHTTCCCSEEECCSSCCSBCCS
T ss_pred cccccccccCCCCCEEECcCCccC-cCCHHHHccCCCCCEEECCCCCCCCcCH
Confidence 7 7778888888888888 566555 3567888888888875543
No 29
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.9e-36 Score=341.96 Aligned_cols=211 Identities=24% Similarity=0.318 Sum_probs=183.0
Q ss_pred cHHHHHHHhcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccC---chhhHHHHHHHHHHHhcCCCceeeEEeEEe
Q 002899 629 TLRQIKAATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCV 704 (869)
Q Consensus 629 ~~~~i~~~t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~ 704 (869)
.+++.....++|++.++||+|+||.||+|+.. +++.||||++.... ......+.+|.+++..++||||+++++++.
T Consensus 52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 131 (412)
T 2vd5_A 52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ 131 (412)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence 34455556789999999999999999999985 68999999986532 223345889999999999999999999999
Q ss_pred eCceEEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEe
Q 002899 705 EGNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKIS 784 (869)
Q Consensus 705 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~ 784 (869)
+.+..|+||||+++|+|.+++...+ ..+++..++.++.||+.||+|||+.+ |+||||||+|||++.++++||+
T Consensus 132 ~~~~~~lVmE~~~gg~L~~~l~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILld~~g~vkL~ 204 (412)
T 2vd5_A 132 DENYLYLVMEYYVGGDLLTLLSKFG----ERIPAEMARFYLAEIVMAIDSVHRLG---YVHRDIKPDNILLDRCGHIRLA 204 (412)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHHHS----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEEC
T ss_pred eCCEEEEEEcCCCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccCHHHeeecCCCCEEEe
Confidence 9999999999999999999996532 26899999999999999999999998 9999999999999999999999
Q ss_pred ecCCceeecCCCccccccccccccccchhhcc-------cCCCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 002899 785 DFGLAKLYEEDKTHISTRIAGTIGYMAPEYAM-------RGYLTSKADVYSFGVVTLEIVSGKSNTNYR 846 (869)
Q Consensus 785 DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~k~DvwSlGvil~elltG~~p~~~~ 846 (869)
|||+++.............+||+.|+|||++. ...++.++|||||||++|||++|+.||...
T Consensus 205 DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~ 273 (412)
T 2vd5_A 205 DFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYAD 273 (412)
T ss_dssp CCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred echhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCC
Confidence 99999877654433334468999999999987 356899999999999999999999999653
No 30
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=7.3e-36 Score=328.83 Aligned_cols=199 Identities=29% Similarity=0.374 Sum_probs=176.4
Q ss_pred cCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEeccc---CchhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEE
Q 002899 638 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSK---SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 713 (869)
Q Consensus 638 ~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~---~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 713 (869)
++|++.+.||+|+||.||+|+.. +++.||+|+++.. .......+.+|+++++.++||||+++++++...+..++||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 57889999999999999999976 6899999998654 2233567889999999999999999999999999999999
Q ss_pred EeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeec
Q 002899 714 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 793 (869)
Q Consensus 714 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~ 793 (869)
||+++|+|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 85 E~~~gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 156 (337)
T 1o6l_A 85 EYANGGELFFHLSRER-----VFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGI 156 (337)
T ss_dssp ECCTTCBHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred eCCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCCHHHEEECCCCCEEEeeccchhhcc
Confidence 9999999999886542 6899999999999999999999998 9999999999999999999999999998643
Q ss_pred CCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 794 EDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 794 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
.... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 157 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~ 207 (337)
T 1o6l_A 157 SDGA-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 207 (337)
T ss_dssp CTTC-CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cCCC-cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCC
Confidence 3222 22346799999999999998999999999999999999999999964
No 31
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=8.3e-36 Score=327.36 Aligned_cols=199 Identities=26% Similarity=0.440 Sum_probs=176.5
Q ss_pred hcCCCCCCeeeccCceEEEEEEE-cCCcEEEEEEeccc--CchhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSK--SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 713 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~-~~g~~VAvK~~~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 713 (869)
.++|++.+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|+++++.++||||+++++++...+..++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 45788999999999999999997 47899999998654 2334567889999999999999999999999999999999
Q ss_pred EeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeec
Q 002899 714 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 793 (869)
Q Consensus 714 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~ 793 (869)
||+++|+|.+++.... .+++..+..++.|+++||+|||+++ |+||||||+|||++.++.+||+|||++....
T Consensus 94 e~~~~~~L~~~l~~~~-----~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 165 (328)
T 3fe3_A 94 EYASGGEVFDYLVAHG-----RMKEKEARSKFRQIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFT 165 (328)
T ss_dssp CCCTTCBHHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSTTCCGGGS
T ss_pred ECCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCCHHHEEEcCCCCEEEeeccCceecC
Confidence 9999999999986543 5899999999999999999999998 9999999999999999999999999997665
Q ss_pred CCCccccccccccccccchhhcccCCCC-chhHHHHHHHHHHHHHcCCCCCCC
Q 002899 794 EDKTHISTRIAGTIGYMAPEYAMRGYLT-SKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 794 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~k~DvwSlGvil~elltG~~p~~~ 845 (869)
... ......||+.|+|||++.+..+. +++||||+||++|||++|+.||..
T Consensus 166 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 216 (328)
T 3fe3_A 166 VGG--KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 216 (328)
T ss_dssp SSC--GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCC--ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCC
Confidence 432 23346799999999999877764 899999999999999999999964
No 32
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.9e-36 Score=330.11 Aligned_cols=202 Identities=25% Similarity=0.409 Sum_probs=169.3
Q ss_pred HhcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccC-chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEE
Q 002899 636 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 713 (869)
Q Consensus 636 ~t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 713 (869)
..++|++.+.||+|+||.||+|... +|+.||||++.... ......+.+|++++++++||||+++++++...+..++||
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 4578899999999999999999974 78999999986543 233567899999999999999999999999999999999
Q ss_pred EeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeec
Q 002899 714 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 793 (869)
Q Consensus 714 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~ 793 (869)
||+++|+|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||++....
T Consensus 88 E~~~gg~L~~~l~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 159 (347)
T 3zgw_A 88 EYCPGGELFDYIISQD-----RLSEEETRVVFRQIVSAVAYVHSQG---YAHRDLKPENLLFDEYHKLKLIDFGLCAKPK 159 (347)
T ss_dssp ECCTTCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBC--
T ss_pred eCCCCCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCccHHHEEEcCCCCEEEEeccCccccc
Confidence 9999999999986543 5899999999999999999999998 9999999999999999999999999988665
Q ss_pred CCCccccccccccccccchhhcccCCC-CchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 794 EDKTHISTRIAGTIGYMAPEYAMRGYL-TSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 794 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
...........||+.|+|||++.+..+ +.++||||+||++|||++|+.||..
T Consensus 160 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~ 212 (347)
T 3zgw_A 160 GNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDD 212 (347)
T ss_dssp ------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCC
Confidence 433333344679999999999987765 8999999999999999999999964
No 33
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.6e-35 Score=320.91 Aligned_cols=202 Identities=31% Similarity=0.530 Sum_probs=178.6
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEEEe
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEY 715 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~ 715 (869)
.++|.+.++||+|+||.||+|... +++.||+|++........+.|.+|++++++++||||+++++++.+++..++||||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 356788999999999999999975 6899999998776667778899999999999999999999999999999999999
Q ss_pred ccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeecCC
Q 002899 716 MKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEED 795 (869)
Q Consensus 716 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~ 795 (869)
+++|+|.+++.... ..+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 89 ~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 161 (310)
T 3s95_A 89 IKGGTLRGIIKSMD----SQYPWSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDE 161 (310)
T ss_dssp CTTCBHHHHHHHCC----TTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEECTTSCEEECCCTTCEECC--
T ss_pred cCCCcHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCcCeEEECCCCCEEEeecccceecccc
Confidence 99999999997643 26899999999999999999999998 999999999999999999999999999876543
Q ss_pred Cccc-------------cccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 796 KTHI-------------STRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 796 ~~~~-------------~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
.... .....||+.|+|||++.+..++.++||||||+++|||++|..|+..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~ 224 (310)
T 3s95_A 162 KTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPD 224 (310)
T ss_dssp ------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTT
T ss_pred cccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcc
Confidence 2211 1135799999999999999999999999999999999999998864
No 34
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=6.7e-36 Score=331.29 Aligned_cols=200 Identities=27% Similarity=0.433 Sum_probs=172.2
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccC---chhhHHHHHHHHHHHhc-CCCceeeEEeEEeeCceEEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQLLL 711 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~---~~~~~~f~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~l 711 (869)
.++|++.++||+|+||.||+|+.. +++.||||+++... ......+..|.+++..+ +||||+++++++.+.+..++
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 468999999999999999999976 58999999987542 23345678899999987 79999999999999999999
Q ss_pred EEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCcee
Q 002899 712 VYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKL 791 (869)
Q Consensus 712 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~ 791 (869)
||||+++|+|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++++||+|||+++.
T Consensus 102 v~E~~~gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NILl~~~g~ikL~DFG~a~~ 173 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKSR-----RFDEARARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKE 173 (353)
T ss_dssp EEECCCSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEeCCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---CcccCCCHHHEEECCCCCEEEccccceee
Confidence 999999999999986543 6899999999999999999999998 99999999999999999999999999975
Q ss_pred ecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 792 YEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 792 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
..... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 174 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~ 226 (353)
T 3txo_A 174 GICNG-VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEA 226 (353)
T ss_dssp SCC----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cccCC-ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCC
Confidence 43322 223346799999999999988899999999999999999999999964
No 35
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.6e-35 Score=360.95 Aligned_cols=318 Identities=19% Similarity=0.249 Sum_probs=259.4
Q ss_pred cHHHHHHHHHHhCCCCCCCCC-----CC--CCCCCCcccc-CCCCCCCCcceEecCCCCcceEEEEeccCCCccccCCcc
Q 002899 2 PKKALKQIGRKLGKKDWNFGV-----DP--CSQKGNWELS-SDDKKGFESNVTCDCSSATCHVVTIALKAQNLTGTLPTE 73 (869)
Q Consensus 2 ~~~~l~~~~~~l~~~~W~~~~-----d~--C~~~g~w~~~-~~~~~~~~~~v~C~~~~~~~~v~~L~l~~~~l~~~~p~~ 73 (869)
+++||++||+.++.++|+.+. +| |. |... ..+.++...||+|++ .+||+.|+|++++++|.+|++
T Consensus 270 d~~ALl~~k~~l~~~~W~~~~~~~~~~~~~C~----W~~~~~~~~w~~~~GV~C~~---~~~V~~L~Ls~~~L~G~ip~~ 342 (876)
T 4ecn_A 270 DYKALKAIWEALDGKNWRYYSGTINNTIHSLN----WNFNKELDMWGDQPGVDLDN---NGRVTGLSLAGFGAKGRVPDA 342 (876)
T ss_dssp HHHHHHHHHHHTTGGGCCCCCSSCSSCCCCCS----CCCSSCGGGTTCCTTEEECT---TSCEEEEECTTTCCEEEECGG
T ss_pred HHHHHHHHHHHcCCCCCCcCCCcccccCCccc----cccccccccccCcCceEecC---CCCEEEEECccCCCCCcCchH
Confidence 468999999999999998765 67 75 4221 223344457899986 479999999999999999999
Q ss_pred ccCCCCCCEEEe-ecCcCCCC-----------------------------------------------------------
Q 002899 74 LSKLRYLKQLDL-SRNCLTGS----------------------------------------------------------- 93 (869)
Q Consensus 74 l~~l~~L~~L~L-s~N~i~~~----------------------------------------------------------- 93 (869)
|++|++|+.|+| ++|.+.+.
T Consensus 343 l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~~~ 422 (876)
T 4ecn_A 343 IGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSR 422 (876)
T ss_dssp GGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCCCC
T ss_pred HhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccccccccc
Confidence 999999999999 77754332
Q ss_pred -----------------Cchhhccc-cceEEEeecccCCC-----------------CCchhhc--Cccccccccccccc
Q 002899 94 -----------------FSPQWASL-QLVELSVMGNRLSG-----------------PFPKVLT--NITTLKNLSIEGNL 136 (869)
Q Consensus 94 -----------------~~~~~~~l-~L~~L~Ls~N~l~~-----------------~~~~~~~--~l~~L~~L~Ls~N~ 136 (869)
+|..+..+ +|+.|+|++|++++ .+|..++ ++++|++|+|++|+
T Consensus 423 l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~ 502 (876)
T 4ecn_A 423 ISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCP 502 (876)
T ss_dssp CCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCT
T ss_pred cchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCC
Confidence 56667776 89999999999998 2787877 99999999999999
Q ss_pred cCCCCCccccCCCCccEEEeeccc-ccc-cCCccccCCC-------CCCeEeccCCcCCCCCcc--ccCCCCcccEEEcc
Q 002899 137 FTGSIPPDIRKLINLQKLILSSNS-FTG-ELPAELTKLT-------NLNDLRISDNNFSGKIPE--FIGKWKKIQKLHIQ 205 (869)
Q Consensus 137 l~~~~~~~~~~l~~L~~L~Ls~N~-i~~-~~p~~~~~l~-------~L~~L~Ls~N~l~~~~~~--~~~~l~~L~~L~L~ 205 (869)
+.+.+|..|.++++|++|+|++|+ +++ .+|..+..++ +|++|+|++|+++ .+|. .|.++++|+.|+|+
T Consensus 503 l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls 581 (876)
T 4ecn_A 503 NMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCV 581 (876)
T ss_dssp TCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECT
T ss_pred CCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECC
Confidence 999999999999999999999998 887 7787665554 9999999999998 7777 89999999999999
Q ss_pred CCcCCCCchHhhhcCCCCCEEEcCCCCCCCCccccccccc-ceEEEcccccCccCCCcccCCCCC--cCEEeccCCCCCC
Q 002899 206 GSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMN-LKTLILTKCLIHGEIPDYIGDMTK--LKNIDLSFNNLTG 282 (869)
Q Consensus 206 ~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~-L~~L~Ls~N~i~~~~p~~~~~l~~--L~~L~Ls~N~l~~ 282 (869)
+|+++ .+| .|..+++|+.|+|++|.+...+.......+ |+.|+|++|+|+ .+|..+..++. |+.|+|++|+|++
T Consensus 582 ~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g 658 (876)
T 4ecn_A 582 HNKVR-HLE-AFGTNVKLTDLKLDYNQIEEIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGS 658 (876)
T ss_dssp TSCCC-BCC-CCCTTSEESEEECCSSCCSCCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTT
T ss_pred CCCcc-cch-hhcCCCcceEEECcCCccccchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCC
Confidence 99998 677 889999999999999998855544444556 999999999998 67777776654 9999999999987
Q ss_pred CCchhh---h--cCCCCCEEEeeCCcCCCCCchhhh---ccCCceeeeccCccCCCC
Q 002899 283 GIPTTF---E--KLAKTNFMYLTGNKLTGPVPKYIF---NSNKNVDISLNNFTWESS 331 (869)
Q Consensus 283 ~~p~~~---~--~l~~L~~L~Ls~N~l~~~~p~~~~---~~l~~l~ls~N~~~~~~~ 331 (869)
.+|... . .+++|+.|+|++|+++ .+|..++ ..++.|+|++|+++..+.
T Consensus 659 ~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~~ip~ 714 (876)
T 4ecn_A 659 EGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMTSIPE 714 (876)
T ss_dssp TSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCSCCCT
T ss_pred ccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCCccCh
Confidence 666322 2 3458889999999998 6777664 578889999998885543
No 36
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.7e-35 Score=319.95 Aligned_cols=201 Identities=29% Similarity=0.426 Sum_probs=172.1
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccC---chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLV 712 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 712 (869)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.|.+|++++++++||||+++++++.+++..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 467889999999999999999965 68899999885432 23356789999999999999999999999999999999
Q ss_pred EEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceee
Q 002899 713 YEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 792 (869)
Q Consensus 713 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~ 792 (869)
|||+++++|.+++.... ++++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||++...
T Consensus 90 ~e~~~g~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 161 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHG-----PLSVDTAINFTNQILDGIKHAHDMR---IVHRDIKPQNILIDSNKTLKIFDFGIAKAL 161 (294)
T ss_dssp EECCCSCBHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCSSSTTC
T ss_pred EeCCCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEEeCCCcccc
Confidence 99999999999986542 6899999999999999999999998 999999999999999999999999999876
Q ss_pred cCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 793 EEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 793 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
............||+.|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus 162 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~ 214 (294)
T 4eqm_A 162 SETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNG 214 (294)
T ss_dssp -------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCS
T ss_pred ccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 54433333446799999999999999999999999999999999999999964
No 37
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1e-35 Score=342.14 Aligned_cols=294 Identities=18% Similarity=0.220 Sum_probs=227.1
Q ss_pred cceEEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCC-Cchhhccc-cceEEEeecccCCCCCchhhcCccccccc
Q 002899 53 TCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGS-FSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNL 130 (869)
Q Consensus 53 ~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~-~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 130 (869)
..+++.|+|++|.+++..|..|.++++|++|+|++|.+.+. .+..|..+ +|++|+|++|++++..|..|.++++|++|
T Consensus 29 ~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 108 (455)
T 3v47_A 29 PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVL 108 (455)
T ss_dssp CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEE
T ss_pred CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEE
Confidence 36799999999999998899999999999999999999854 46678877 89999999999999989999999999999
Q ss_pred cccccccCCCCCcc--ccCCCCccEEEeecccccccCCcc-ccCCCCCCeEeccCCcCCCCCccccCCC-----------
Q 002899 131 SIEGNLFTGSIPPD--IRKLINLQKLILSSNSFTGELPAE-LTKLTNLNDLRISDNNFSGKIPEFIGKW----------- 196 (869)
Q Consensus 131 ~Ls~N~l~~~~~~~--~~~l~~L~~L~Ls~N~i~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l----------- 196 (869)
+|++|++++..+.. |..+++|++|+|++|++++..|.. +.++++|++|+|++|++++..+..+..+
T Consensus 109 ~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~ 188 (455)
T 3v47_A 109 TLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLS 188 (455)
T ss_dssp ECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECT
T ss_pred eCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccc
Confidence 99999999755554 899999999999999999887876 8899999999999999998777665443
Q ss_pred -----------------------CcccEEEccCCcCCC------------------------------------------
Q 002899 197 -----------------------KKIQKLHIQGSSLEG------------------------------------------ 211 (869)
Q Consensus 197 -----------------------~~L~~L~L~~N~l~~------------------------------------------ 211 (869)
++|+.|+|++|++++
T Consensus 189 ~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~ 268 (455)
T 3v47_A 189 SITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFT 268 (455)
T ss_dssp TCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTT
T ss_pred cCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccc
Confidence 456666666665543
Q ss_pred ---------------------CchHhhhcCCCCCEEEcCCCCCCCCccccccc-ccceEEEcccccCccCCCcccCCCCC
Q 002899 212 ---------------------PIPASISALTSLTDLRISDLKGSESAFPKLDK-MNLKTLILTKCLIHGEIPDYIGDMTK 269 (869)
Q Consensus 212 ---------------------~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~-~~L~~L~Ls~N~i~~~~p~~~~~l~~ 269 (869)
..|..+..+++|+.|+|++|.+.......+.. .+|+.|+|++|+|++..|..|..+++
T Consensus 269 ~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 348 (455)
T 3v47_A 269 FKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDK 348 (455)
T ss_dssp TGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTT
T ss_pred cccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCccc
Confidence 34555666667777777777766554444332 36777777777777666777777777
Q ss_pred cCEEeccCCCCCCCCchhhhcCCCCCEEEeeCCcCCCCCchhh--hccCCceeeeccCccCCCCCCCCCCCC-Cccceec
Q 002899 270 LKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYI--FNSNKNVDISLNNFTWESSDPIECPRG-SVNLVES 346 (869)
Q Consensus 270 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~--~~~l~~l~ls~N~~~~~~~~p~~C~c~-~~~~~~~ 346 (869)
|+.|+|++|++++..|..|..+++|++|+|++|+|++..+..+ ...++.|++++| ||.|+|+ +.++..|
T Consensus 349 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N--------~l~~~~~~~~~l~~~ 420 (455)
T 3v47_A 349 LEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTN--------PWDCSCPRIDYLSRW 420 (455)
T ss_dssp CCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSS--------CBCCCTTTTHHHHHH
T ss_pred CCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCC--------CcccCCCcchHHHHH
Confidence 7777777777776667777777777777777777775444333 346677777777 8999998 5667789
Q ss_pred cCCCCCCC
Q 002899 347 YSSPRNKL 354 (869)
Q Consensus 347 l~~~~~~~ 354 (869)
+.....+.
T Consensus 421 l~~~~~~~ 428 (455)
T 3v47_A 421 LNKNSQKE 428 (455)
T ss_dssp HHHTTTTE
T ss_pred HHhCccce
Confidence 87654443
No 38
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.6e-35 Score=332.28 Aligned_cols=200 Identities=26% Similarity=0.392 Sum_probs=174.7
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccC---chhhHHHHHHHHHHHhc-CCCceeeEEeEEeeCceEEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQLLL 711 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~---~~~~~~f~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~l 711 (869)
.++|++.++||+|+||.||+|+.. +++.||+|+++... ......+..|..++.++ +|||||++++++.+.+..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 357889999999999999999976 57899999987542 22345678899998876 89999999999999999999
Q ss_pred EEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCcee
Q 002899 712 VYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKL 791 (869)
Q Consensus 712 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~ 791 (869)
||||+++|+|..++.... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++++||+|||+++.
T Consensus 131 V~E~~~gg~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFGla~~ 202 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQR-----KLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKE 202 (396)
T ss_dssp EEECCTTCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEcCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEECCCCCEEEeecceeee
Confidence 999999999999886543 6899999999999999999999998 99999999999999999999999999986
Q ss_pred ecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 792 YEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 792 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
...... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 203 ~~~~~~-~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~ 255 (396)
T 4dc2_A 203 GLRPGD-TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 255 (396)
T ss_dssp CCCTTC-CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTT
T ss_pred cccCCC-ccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcc
Confidence 432222 23346799999999999999999999999999999999999999964
No 39
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=3.2e-35 Score=328.75 Aligned_cols=208 Identities=25% Similarity=0.415 Sum_probs=179.8
Q ss_pred cCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccC---chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEE
Q 002899 638 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 713 (869)
Q Consensus 638 ~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 713 (869)
++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+++++.++|||||++++++.+.+..++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 56889999999999999999976 57899999986532 233567889999999999999999999999999999999
Q ss_pred EeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeec
Q 002899 714 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 793 (869)
Q Consensus 714 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~ 793 (869)
||+++|+|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++....
T Consensus 95 e~~~gg~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 166 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQNV-----HFKEETVKLFICELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLP 166 (384)
T ss_dssp CCCTTEEHHHHHHTTC-----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred ecCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEECCCCCEEEeccceeeecc
Confidence 9999999999997643 5899999999999999999999998 9999999999999999999999999998765
Q ss_pred CCCccccccccccccccchhhccc---CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcchhhHH
Q 002899 794 EDKTHISTRIAGTIGYMAPEYAMR---GYLTSKADVYSFGVVTLEIVSGKSNTNYRPNEDFVYLL 855 (869)
Q Consensus 794 ~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~l~ 855 (869)
... ......||+.|+|||++.. ..++.++|||||||++|||++|+.||..........+.
T Consensus 167 ~~~--~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~ 229 (384)
T 4fr4_A 167 RET--QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIV 229 (384)
T ss_dssp TTC--CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHH
T ss_pred CCC--ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHH
Confidence 432 2234679999999999864 45899999999999999999999999765444443333
No 40
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=5.4e-35 Score=324.88 Aligned_cols=200 Identities=27% Similarity=0.378 Sum_probs=177.4
Q ss_pred HhcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCch------hhHHHHHHHHHHHhcCCCceeeEEeEEeeCce
Q 002899 636 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQ------GNREFVNEIGMISAQQHPNLVKLYGCCVEGNQ 708 (869)
Q Consensus 636 ~t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~~------~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~ 708 (869)
..++|++.+.||+|+||.||+|... +|+.||+|+++..... ....+.+|+++++.++||||+++++++.+.+.
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 89 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD 89 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence 3567899999999999999999976 6899999998764322 24678999999999999999999999999999
Q ss_pred EEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCC----cEEEe
Q 002899 709 LLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDL----NAKIS 784 (869)
Q Consensus 709 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~----~~kl~ 784 (869)
.++||||+++|+|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++ .+||+
T Consensus 90 ~~lv~e~~~gg~L~~~l~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~~~vkl~ 161 (361)
T 2yab_A 90 VVLILELVSGGELFDFLAQKE-----SLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLI 161 (361)
T ss_dssp EEEEEECCCSCBHHHHHTTCS-----CCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEEC
T ss_pred EEEEEEcCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeCCCCCccCEEEE
Confidence 999999999999999996542 6899999999999999999999998 99999999999998877 79999
Q ss_pred ecCCceeecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 785 DFGLAKLYEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 785 DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
|||++........ .....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 162 DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~ 220 (361)
T 2yab_A 162 DFGLAHEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220 (361)
T ss_dssp CCSSCEECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred ecCCceEcCCCCc--cccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCC
Confidence 9999987654322 2345799999999999988999999999999999999999999964
No 41
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=2.5e-35 Score=325.57 Aligned_cols=203 Identities=29% Similarity=0.431 Sum_probs=176.3
Q ss_pred HHHhcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccC---chhhHHHHHHHHHHHhc-CCCceeeEEeEEeeCce
Q 002899 634 KAATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQ 708 (869)
Q Consensus 634 ~~~t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~---~~~~~~f~~E~~~l~~l-~H~nIv~l~~~~~~~~~ 708 (869)
....++|.+.++||+|+||.||+|+.. +++.||||+++... ......+..|.+++..+ +||||+++++++.+.+.
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~ 92 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN 92 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence 445678999999999999999999986 68899999987542 23345678889998876 99999999999999999
Q ss_pred EEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCC
Q 002899 709 LLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGL 788 (869)
Q Consensus 709 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGl 788 (869)
.++||||+++|+|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++++||+|||+
T Consensus 93 ~~lv~E~~~gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~ 164 (345)
T 1xjd_A 93 LFFVMEYLNGGDLMYHIQSCH-----KFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGM 164 (345)
T ss_dssp EEEEEECCTTCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTT
T ss_pred EEEEEeCCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCChhhEEECCCCCEEEeEChh
Confidence 999999999999999986532 5899999999999999999999998 99999999999999999999999999
Q ss_pred ceeecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 789 AKLYEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 789 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
++....... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 165 a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~ 220 (345)
T 1xjd_A 165 CKENMLGDA-KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHG 220 (345)
T ss_dssp CBCCCCTTC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred hhhcccCCC-cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCC
Confidence 976433222 23346799999999999998999999999999999999999999964
No 42
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1.3e-35 Score=331.27 Aligned_cols=203 Identities=18% Similarity=0.177 Sum_probs=174.3
Q ss_pred HhcCCCCCCeeeccCceEEEEEE------EcCCcEEEEEEecccCchhhHHHHHHHHHHHhcC---CCceeeEEeEEeeC
Q 002899 636 ATNNFDPANKVGEGGFGSVYKGI------LSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQ---HPNLVKLYGCCVEG 706 (869)
Q Consensus 636 ~t~~f~~~~~IG~G~fG~Vyka~------~~~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~---H~nIv~l~~~~~~~ 706 (869)
..++|.+.++||+|+||.||+|. ..+++.||||+++... ..++..|++++..++ |+||+++++++...
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~ 139 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence 45678899999999999999994 4468899999997543 457778888888876 99999999999999
Q ss_pred ceEEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcC---------
Q 002899 707 NQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDK--------- 777 (869)
Q Consensus 707 ~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~--------- 777 (869)
+..++||||+++|+|.+++..........+++..++.++.||++||+|||+.+ |+||||||+|||++.
T Consensus 140 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~---ivHrDiKp~NIll~~~~~~~~~~~ 216 (365)
T 3e7e_A 140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE---IIHGDIKPDNFILGNGFLEQDDED 216 (365)
T ss_dssp SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECGGGTCC----
T ss_pred CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEecccccCccccc
Confidence 99999999999999999997532222346999999999999999999999987 999999999999998
Q ss_pred --CCcEEEeecCCceeecCC-CccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCC
Q 002899 778 --DLNAKISDFGLAKLYEED-KTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTN 844 (869)
Q Consensus 778 --~~~~kl~DFGla~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~ 844 (869)
++.+||+|||+++.+... .........||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 217 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~ 286 (365)
T 3e7e_A 217 DLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKV 286 (365)
T ss_dssp --CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCE
T ss_pred cccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccc
Confidence 899999999999876422 2223344679999999999999999999999999999999999999984
No 43
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=3.7e-35 Score=320.79 Aligned_cols=196 Identities=27% Similarity=0.450 Sum_probs=175.5
Q ss_pred cCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccC---chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEE
Q 002899 638 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 713 (869)
Q Consensus 638 ~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 713 (869)
++|++.+.||+|+||.||+|+.. +|+.||+|+++... ......+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 56888999999999999999975 68999999986542 223456788999999999999999999999999999999
Q ss_pred EeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeec
Q 002899 714 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 793 (869)
Q Consensus 714 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~ 793 (869)
||+++|+|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 86 e~~~gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~ 157 (318)
T 1fot_A 86 DYIEGGELFSLLRKSQ-----RFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVP 157 (318)
T ss_dssp CCCCSCBHHHHHHHTS-----SCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTSCEEECCCSSCEECS
T ss_pred eCCCCCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChheEEEcCCCCEEEeecCcceecC
Confidence 9999999999997543 5899999999999999999999998 9999999999999999999999999998764
Q ss_pred CCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 794 EDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 794 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
.. .....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 158 ~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 205 (318)
T 1fot_A 158 DV----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYD 205 (318)
T ss_dssp SC----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCC
T ss_pred Cc----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCC
Confidence 32 2245799999999999998999999999999999999999999964
No 44
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=2.4e-35 Score=360.80 Aligned_cols=305 Identities=30% Similarity=0.420 Sum_probs=241.6
Q ss_pred cHHHHHHHHHHhCC----CCCCCCCCCCCCCCCccccCCCCCCCCcceEecCCCCcceEEEEeccCCCcccc---CC---
Q 002899 2 PKKALKQIGRKLGK----KDWNFGVDPCSQKGNWELSSDDKKGFESNVTCDCSSATCHVVTIALKAQNLTGT---LP--- 71 (869)
Q Consensus 2 ~~~~l~~~~~~l~~----~~W~~~~d~C~~~g~w~~~~~~~~~~~~~v~C~~~~~~~~v~~L~l~~~~l~~~---~p--- 71 (869)
+++||+++|+.+.+ .+|..+.|||.|.| |+|+ .+||+.|+|+++++.|. +|
T Consensus 13 ~~~all~~k~~~~~~~~l~~W~~~~~~C~w~g---------------v~C~----~~~v~~L~L~~~~l~g~~~~l~~~l 73 (768)
T 3rgz_A 13 EIHQLISFKDVLPDKNLLPDWSSNKNPCTFDG---------------VTCR----DDKVTSIDLSSKPLNVGFSAVSSSL 73 (768)
T ss_dssp HHHHHHHHHTTCSCTTSSTTCCTTSCGGGSTT---------------EEEE----TTEEEEEECTTSCCCEEHHHHHHHT
T ss_pred HHHHHHHHHhhCCCcccccCCCCCCCCcCCcc---------------eEEC----CCcEEEEECCCCCcCCccCccChhH
Confidence 47899999999875 57988889998665 9997 47999999999999886 54
Q ss_pred --------------------ccccCCCCCCEEEeecCcCCCCCch--hhccc-cceEEEeecccCCCCCchhh-cCcccc
Q 002899 72 --------------------TELSKLRYLKQLDLSRNCLTGSFSP--QWASL-QLVELSVMGNRLSGPFPKVL-TNITTL 127 (869)
Q Consensus 72 --------------------~~l~~l~~L~~L~Ls~N~i~~~~~~--~~~~l-~L~~L~Ls~N~l~~~~~~~~-~~l~~L 127 (869)
..|.++++|++|+|++|.+++.+|. .+..+ +|++|+|++|.+++..|..+ .++++|
T Consensus 74 ~~L~~L~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L 153 (768)
T 3rgz_A 74 LSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSL 153 (768)
T ss_dssp TTCTTCCEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTC
T ss_pred hccCcccccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCC
Confidence 4566677777777777777766665 56665 67777777777776666554 667777
Q ss_pred ccccccccccCCCCCcc---ccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEc
Q 002899 128 KNLSIEGNLFTGSIPPD---IRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHI 204 (869)
Q Consensus 128 ~~L~Ls~N~l~~~~~~~---~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 204 (869)
++|+|++|++++..|.. +.++++|++|+|++|++++..| +..+++|++|+|++|++++.+|. ++++++|++|+|
T Consensus 154 ~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~L 230 (768)
T 3rgz_A 154 EVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVD--VSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDI 230 (768)
T ss_dssp SEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCB--CTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEEC
T ss_pred CEEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCC--cccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEEC
Confidence 77777777777666655 6777777777777777776544 37788999999999999887777 999999999999
Q ss_pred cCCcCCCCchHhhhcCCCCCEEEcCCCCCCCCcccccccccceEEEcccccCccCCCcccCCC-CCcCEEeccCCCCCCC
Q 002899 205 QGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDM-TKLKNIDLSFNNLTGG 283 (869)
Q Consensus 205 ~~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l-~~L~~L~Ls~N~l~~~ 283 (869)
++|.+++.+|..+.++++|+.|+|++|.+....... ...+|++|+|++|++++.+|..+..+ ++|++|+|++|++++.
T Consensus 231 s~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~-~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~ 309 (768)
T 3rgz_A 231 SGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL-PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGA 309 (768)
T ss_dssp CSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC-CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEEC
T ss_pred cCCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc-ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCc
Confidence 999999999999999999999999999887544333 45578888888888888888877664 8888888888888888
Q ss_pred CchhhhcCCCCCEEEeeCCcCCCCCchh-h--hccCCceeeeccCccCC
Q 002899 284 IPTTFEKLAKTNFMYLTGNKLTGPVPKY-I--FNSNKNVDISLNNFTWE 329 (869)
Q Consensus 284 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~--~~~l~~l~ls~N~~~~~ 329 (869)
+|..|..+++|+.|+|++|+++|.+|.. + ...++.|++++|.+++.
T Consensus 310 ~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~ 358 (768)
T 3rgz_A 310 VPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGE 358 (768)
T ss_dssp CCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEEC
T ss_pred cchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCcc
Confidence 8888888888888888888888888866 3 45677888888877643
No 45
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=3.4e-35 Score=351.63 Aligned_cols=318 Identities=19% Similarity=0.221 Sum_probs=247.3
Q ss_pred cceEEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhhcCcccccccc
Q 002899 53 TCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLS 131 (869)
Q Consensus 53 ~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 131 (869)
+..++.|+|++|+|++..+.+|.++++|++|+|++|+|+++++.+|..+ +|++|+|++|+|++..+..|.++++|++|+
T Consensus 51 p~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~ 130 (635)
T 4g8a_A 51 PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 130 (635)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEE
T ss_pred CcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEE
Confidence 4578999999999998888899999999999999999999999999988 899999999999988889999999999999
Q ss_pred ccccccCCCCCccccCCCCccEEEeecccccc-cCCccccCCCCCCeEeccCCcCCCCCccccC----------------
Q 002899 132 IEGNLFTGSIPPDIRKLINLQKLILSSNSFTG-ELPAELTKLTNLNDLRISDNNFSGKIPEFIG---------------- 194 (869)
Q Consensus 132 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~---------------- 194 (869)
|++|+|++..+..|+++++|++|+|++|++++ ..|..+..+++|++|+|++|+|++..+..|.
T Consensus 131 Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~ 210 (635)
T 4g8a_A 131 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 210 (635)
T ss_dssp CTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTT
T ss_pred CCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhccc
Confidence 99999998777789999999999999999986 4578889999999999999987644322110
Q ss_pred --------------------------------------------------------------------------------
Q 002899 195 -------------------------------------------------------------------------------- 194 (869)
Q Consensus 195 -------------------------------------------------------------------------------- 194 (869)
T Consensus 211 n~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~ 290 (635)
T 4g8a_A 211 NPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 290 (635)
T ss_dssp CCCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEEC
T ss_pred CcccccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhh
Confidence
Q ss_pred ------------------------------------------------------------------------------CC
Q 002899 195 ------------------------------------------------------------------------------KW 196 (869)
Q Consensus 195 ------------------------------------------------------------------------------~l 196 (869)
.+
T Consensus 291 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l 370 (635)
T 4g8a_A 291 LDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDL 370 (635)
T ss_dssp CCSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBC
T ss_pred hcccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccc
Confidence 12
Q ss_pred CcccEEEccCCcCCCC--------------------------------------------------chHhhhcCCCCCEE
Q 002899 197 KKIQKLHIQGSSLEGP--------------------------------------------------IPASISALTSLTDL 226 (869)
Q Consensus 197 ~~L~~L~L~~N~l~~~--------------------------------------------------~~~~l~~l~~L~~L 226 (869)
++|+.|++++|.+... .+..+..+++|+.+
T Consensus 371 ~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l 450 (635)
T 4g8a_A 371 PSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYL 450 (635)
T ss_dssp TTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEE
T ss_pred cccccchhhccccccccccccchhhhhhhhhhhccccccccccccccccccccchhhhhccccccccccccccccccccc
Confidence 2344444444433210 00112233344444
Q ss_pred EcCCCCCCCCc-------------------------ccccc-cccceEEEcccccCccCCCcccCCCCCcCEEeccCCCC
Q 002899 227 RISDLKGSESA-------------------------FPKLD-KMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNL 280 (869)
Q Consensus 227 ~L~~n~~~~~~-------------------------~~~~~-~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l 280 (869)
+++.|.+.... ...+. ..+|+.|+|++|+|++..|..|.++++|+.|+|++|+|
T Consensus 451 ~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l 530 (635)
T 4g8a_A 451 DISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNF 530 (635)
T ss_dssp ECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred cccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcC
Confidence 44444432211 11111 23789999999999988899999999999999999999
Q ss_pred CCCCchhhhcCCCCCEEEeeCCcCCCCCchhhh---ccCCceeeeccCccCCCCCCCCCCCCCccceeccCCCCCCCCCC
Q 002899 281 TGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIF---NSNKNVDISLNNFTWESSDPIECPRGSVNLVESYSSPRNKLDKV 357 (869)
Q Consensus 281 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~---~~l~~l~ls~N~~~~~~~~p~~C~c~~~~~~~~l~~~~~~~~~~ 357 (869)
++..|..|.++++|+.|+|++|+|++..|..+. ..++.|+|++| ||.|||++.||+.|++.....+..
T Consensus 531 ~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~N--------p~~C~C~~~~~~~wl~~~~~~~~~- 601 (635)
T 4g8a_A 531 FSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQN--------DFACTCEHQSFLQWIKDQRQLLVE- 601 (635)
T ss_dssp CBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTC--------CBCCSGGGHHHHHHHHHTTTTBSC-
T ss_pred CCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCC--------CCcccCCcHHHHHHHHhCCCccCC-
Confidence 988888899999999999999999988887763 46888999998 999999999999999765544322
Q ss_pred cCccCCCCCCCCCcccccceee---eecC
Q 002899 358 HPCLRQNFPCSAPADQYHYTLH---INCG 383 (869)
Q Consensus 358 ~~~~~~~~~C~~p~~~~~~~~~---~~c~ 383 (869)
....+|+.|+..+|+.+. +.|.
T Consensus 602 ----~~~~~C~~P~~~~g~~l~~~~~~C~ 626 (635)
T 4g8a_A 602 ----VERMECATPSDKQGMPVLSLNITCQ 626 (635)
T ss_dssp ----GGGCBBCSSTTTTTCBGGGCCCCC-
T ss_pred ----CCCceeCCchHHCCCEeeeeccCCC
Confidence 245789999999886544 4563
No 46
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=6e-35 Score=326.23 Aligned_cols=207 Identities=27% Similarity=0.436 Sum_probs=177.4
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc--------CCcEEEEEEecccCc-hhhHHHHHHHHHHHhc-CCCceeeEEeEEeeC
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS--------DGTVIAVKQLSSKSR-QGNREFVNEIGMISAQ-QHPNLVKLYGCCVEG 706 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~--------~g~~VAvK~~~~~~~-~~~~~f~~E~~~l~~l-~H~nIv~l~~~~~~~ 706 (869)
.++|.+.+.||+|+||.||+|+.. ++..||||+++.... ...+++.+|+++++++ +||||+++++++.+.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 467888999999999999999862 346799999976533 3456799999999999 899999999999999
Q ss_pred ceEEEEEEeccCCchhhhhhcCCcc-----------cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEE
Q 002899 707 NQLLLVYEYMKNNCLSRAIFGKDTE-----------YRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLL 775 (869)
Q Consensus 707 ~~~~lV~E~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl 775 (869)
+..++||||+++|+|.+++...... ....+++..+..++.||++||+|||+++ |+||||||+|||+
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchhhEEE
Confidence 9999999999999999999765321 1235899999999999999999999998 9999999999999
Q ss_pred cCCCcEEEeecCCceeecCCCcc-ccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHc-CCCCCCCC
Q 002899 776 DKDLNAKISDFGLAKLYEEDKTH-ISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNYR 846 (869)
Q Consensus 776 ~~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~ 846 (869)
+.++.+||+|||+++........ ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||...
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~ 309 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 309 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 99999999999999876543221 2223457889999999999999999999999999999999 99999653
No 47
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=5.2e-35 Score=323.36 Aligned_cols=199 Identities=27% Similarity=0.397 Sum_probs=175.1
Q ss_pred cCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccC---chhhHHHHHHHHHHHhc-CCCceeeEEeEEeeCceEEEE
Q 002899 638 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQLLLV 712 (869)
Q Consensus 638 ~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~---~~~~~~f~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV 712 (869)
++|++.+.||+|+||.||+|+.. +++.||+|+++... ....+.+.+|.+++.++ +||||+++++++.+.+..++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 56888999999999999999976 58899999987542 23345678899999887 899999999999999999999
Q ss_pred EEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceee
Q 002899 713 YEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 792 (869)
Q Consensus 713 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~ 792 (869)
|||+++|+|.+++.... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++++||+|||+++..
T Consensus 89 ~e~~~gg~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFG~a~~~ 160 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQR-----KLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 160 (345)
T ss_dssp ECCCCSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCGGGCBCS
T ss_pred EeCCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEEeccccccc
Confidence 99999999999886542 5899999999999999999999998 999999999999999999999999999764
Q ss_pred cCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 793 EEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 793 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
..... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 161 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 212 (345)
T 3a8x_A 161 LRPGD-TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 212 (345)
T ss_dssp CCTTC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cCCCC-cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCC
Confidence 32222 23346799999999999998999999999999999999999999964
No 48
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1.5e-34 Score=315.33 Aligned_cols=202 Identities=29% Similarity=0.447 Sum_probs=173.1
Q ss_pred hcCCCCCCeeeccCceEEEEEEEcCCcEEEEEEecccCc--hhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSR--QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 714 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~~--~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 714 (869)
.++|++.+.||+|+||+||+|+..+++.||+|++..... .....+.+|++++++++||||+++++++.+++..++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 467889999999999999999998899999999865432 224678899999999999999999999999999999999
Q ss_pred eccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeecC
Q 002899 715 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEE 794 (869)
Q Consensus 715 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~~ 794 (869)
|+++ +|.+.+.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 100 ~~~~-~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 171 (311)
T 3niz_A 100 FMEK-DLKKVLDENK----TGLQDSQIKIYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGI 171 (311)
T ss_dssp CCSE-EHHHHHHTCT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEETTS
T ss_pred CCCC-CHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCchHhEEECCCCCEEEccCcCceecCC
Confidence 9985 7877775543 25899999999999999999999998 99999999999999999999999999987653
Q ss_pred CCccccccccccccccchhhccc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCC
Q 002899 795 DKTHISTRIAGTIGYMAPEYAMR-GYLTSKADVYSFGVVTLEIVSGKSNTNYRP 847 (869)
Q Consensus 795 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~ 847 (869)
.... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||....
T Consensus 172 ~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~ 224 (311)
T 3niz_A 172 PVRS-YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVT 224 (311)
T ss_dssp CCC----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred Cccc-ccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCC
Confidence 3222 233568999999999876 568999999999999999999999997643
No 49
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=5.6e-35 Score=318.23 Aligned_cols=205 Identities=32% Similarity=0.525 Sum_probs=169.6
Q ss_pred HhcCCCCCCeeeccCceEEEEEEEcCCcEEEEEEecccC--chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEE
Q 002899 636 ATNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 713 (869)
Q Consensus 636 ~t~~f~~~~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 713 (869)
..++|++.+.||+|+||.||+|+. +++.||||++.... ....++|.+|++++++++||||+++++++.+.+..++||
T Consensus 35 ~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 113 (309)
T 3p86_A 35 PWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVT 113 (309)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEE
T ss_pred ChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEE
Confidence 356788899999999999999987 57889999987653 333567899999999999999999999999999999999
Q ss_pred EeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeec
Q 002899 714 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 793 (869)
Q Consensus 714 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~ 793 (869)
||+++|+|.+++..... ...+++..+..++.|+++||+|||+.+ ++|+||||||+|||++.++.+||+|||+++...
T Consensus 114 e~~~~~~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~-~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 190 (309)
T 3p86_A 114 EYLSRGSLYRLLHKSGA--REQLDERRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA 190 (309)
T ss_dssp ECCTTCBHHHHHHSTTH--HHHSCHHHHHHHHHHHHHHHHHHHTSS-SCCCCTTCCGGGEEECTTCCEEECCCC------
T ss_pred ecCCCCcHHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHcCC-CCEECCCCChhhEEEeCCCcEEECCCCCCcccc
Confidence 99999999999976532 224899999999999999999999985 349999999999999999999999999997654
Q ss_pred CCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 794 EDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 794 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
.... ......||+.|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus 191 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~ 241 (309)
T 3p86_A 191 STFL-SSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGN 241 (309)
T ss_dssp ------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTT
T ss_pred cccc-ccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 3321 22345789999999999999999999999999999999999999964
No 50
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=9.5e-35 Score=318.51 Aligned_cols=202 Identities=31% Similarity=0.481 Sum_probs=174.2
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCc-hhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR-QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 714 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~-~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 714 (869)
.++|++.+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|+.+++.++||||+++++++.+++..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 367889999999999999999976 789999999865432 234678899999999999999999999999999999999
Q ss_pred eccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeecC
Q 002899 715 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEE 794 (869)
Q Consensus 715 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~~ 794 (869)
|+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++..+..
T Consensus 86 ~~~~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 157 (323)
T 3tki_A 86 YCSGGELFDRIEPDI-----GMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRY 157 (323)
T ss_dssp CCTTEEGGGGSBTTT-----BCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEE
T ss_pred cCCCCcHHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ccccccchHHEEEeCCCCEEEEEeeccceecc
Confidence 999999999886543 5899999999999999999999998 99999999999999999999999999987643
Q ss_pred CCc-cccccccccccccchhhcccCCC-CchhHHHHHHHHHHHHHcCCCCCCCC
Q 002899 795 DKT-HISTRIAGTIGYMAPEYAMRGYL-TSKADVYSFGVVTLEIVSGKSNTNYR 846 (869)
Q Consensus 795 ~~~-~~~~~~~gt~~y~aPE~~~~~~~-~~k~DvwSlGvil~elltG~~p~~~~ 846 (869)
... .......||+.|+|||++.+..+ +.++|||||||++|||++|+.||...
T Consensus 158 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~ 211 (323)
T 3tki_A 158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 211 (323)
T ss_dssp TTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSS
T ss_pred CCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCC
Confidence 322 22234679999999999987664 78999999999999999999999754
No 51
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=4.6e-35 Score=324.42 Aligned_cols=201 Identities=27% Similarity=0.378 Sum_probs=175.9
Q ss_pred HhcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccC---chhhHHHHHHHHHHHhc-CCCceeeEEeEEeeCceEE
Q 002899 636 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQLL 710 (869)
Q Consensus 636 ~t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~---~~~~~~f~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~ 710 (869)
..++|++.++||+|+||.||+|+.. +++.||||+++... ......+..|.+++..+ +||||+++++++.+.+..|
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 3568999999999999999999986 47899999987542 23345678899999887 8999999999999999999
Q ss_pred EEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCce
Q 002899 711 LVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAK 790 (869)
Q Consensus 711 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~ 790 (869)
+||||+++|+|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++++||+|||+++
T Consensus 98 lv~E~~~gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~ 169 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVG-----RFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCK 169 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred EEEeCCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEEcCCCcEEEEeCCccc
Confidence 9999999999999986542 5899999999999999999999998 9999999999999999999999999998
Q ss_pred eecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 791 LYEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 791 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
....... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 170 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~ 223 (353)
T 2i0e_A 170 ENIWDGV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG 223 (353)
T ss_dssp CCCCTTC-CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ccccCCc-ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCC
Confidence 6432222 23346799999999999998999999999999999999999999964
No 52
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-34 Score=317.27 Aligned_cols=199 Identities=20% Similarity=0.317 Sum_probs=176.8
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEEEe
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEY 715 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~ 715 (869)
.++|++.+.||+|+||.||+|... +++.||+|.+... ......+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 467889999999999999999976 5789999998754 33456788999999999999999999999999999999999
Q ss_pred ccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcC--CCcEEEeecCCceeec
Q 002899 716 MKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDK--DLNAKISDFGLAKLYE 793 (869)
Q Consensus 716 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~--~~~~kl~DFGla~~~~ 793 (869)
+++|+|.+++.... ..+++..+..++.|+++||+|||+.+ |+||||||+|||++. ++.+||+|||++....
T Consensus 83 ~~g~~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~~g---ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~ 155 (321)
T 1tki_A 83 ISGLDIFERINTSA----FELNEREIVSYVHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLK 155 (321)
T ss_dssp CCCCBHHHHHTSSS----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCTTCEECC
T ss_pred CCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEccCCCCCEEEEECCCCeECC
Confidence 99999999986542 25899999999999999999999998 999999999999987 7899999999998775
Q ss_pred CCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 794 EDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 794 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
.... .....||+.|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus 156 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~ 205 (321)
T 1tki_A 156 PGDN--FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLA 205 (321)
T ss_dssp TTCE--EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred CCCc--cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcC
Confidence 4332 2345789999999999988899999999999999999999999965
No 53
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=5.3e-35 Score=311.63 Aligned_cols=201 Identities=30% Similarity=0.545 Sum_probs=177.6
Q ss_pred hcCCCCCCeeeccCceEEEEEEEcCCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEEEec
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYM 716 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~~ 716 (869)
.++|++.+.||+|+||.||+|...+++.||+|++..... ..+++.+|++++++++||||+++++++.+++..++||||+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 87 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence 356888999999999999999998889999999975433 3567999999999999999999999999999999999999
Q ss_pred cCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeecCCC
Q 002899 717 KNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEEDK 796 (869)
Q Consensus 717 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~ 796 (869)
++++|.+++.... ..+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 88 ~~~~L~~~l~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 160 (269)
T 4hcu_A 88 EHGCLSDYLRTQR----GLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ 160 (269)
T ss_dssp TTCBHHHHHHTTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHH
T ss_pred CCCcHHHHHHhcC----cccCHHHHHHHHHHHHHHHHHHHhCC---eecCCcchheEEEcCCCCEEeccccccccccccc
Confidence 9999999996543 25899999999999999999999998 9999999999999999999999999998665433
Q ss_pred ccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHc-CCCCCCC
Q 002899 797 THISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNY 845 (869)
Q Consensus 797 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~ 845 (869)
........+|+.|+|||++....++.++||||+|+++|||++ |+.||..
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~ 210 (269)
T 4hcu_A 161 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 210 (269)
T ss_dssp HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred cccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCC
Confidence 222333456788999999998999999999999999999999 9999865
No 54
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=8e-35 Score=322.41 Aligned_cols=196 Identities=25% Similarity=0.366 Sum_probs=175.8
Q ss_pred cCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccC---chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEE
Q 002899 638 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 713 (869)
Q Consensus 638 ~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 713 (869)
++|++.+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 57888999999999999999976 68999999986542 233467889999999999999999999999999999999
Q ss_pred EeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeec
Q 002899 714 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 793 (869)
Q Consensus 714 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~ 793 (869)
||+++|+|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 121 e~~~gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~ 192 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRIG-----RFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192 (350)
T ss_dssp ECCTTCBHHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred cCCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---cccccCccceEEECCCCCEEEcccccceecc
Confidence 9999999999986542 5899999999999999999999998 9999999999999999999999999998764
Q ss_pred CCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 794 EDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 794 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
.. .....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 193 ~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~ 240 (350)
T 1rdq_E 193 GR----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240 (350)
T ss_dssp SC----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CC----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCC
Confidence 32 2245799999999999998999999999999999999999999964
No 55
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=7.7e-35 Score=319.82 Aligned_cols=200 Identities=27% Similarity=0.421 Sum_probs=166.8
Q ss_pred hcCCCCCCeeeccCceEEEEEEE----cCCcEEEEEEecccC----chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCce
Q 002899 637 TNNFDPANKVGEGGFGSVYKGIL----SDGTVIAVKQLSSKS----RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQ 708 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~----~~g~~VAvK~~~~~~----~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~ 708 (869)
.++|++.+.||+|+||.||+|+. .+++.||+|+++... ......+.+|+++++.++||||+++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46788999999999999999997 478999999987642 2234567889999999999999999999999999
Q ss_pred EEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCC
Q 002899 709 LLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGL 788 (869)
Q Consensus 709 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGl 788 (869)
.++||||+++|+|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~Dfg~ 167 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG-----IFMEDTACFYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGL 167 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTSCEEECCCSC
T ss_pred EEEEEeCCCCCcHHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHHhCC---EEcccCCHHHeEECCCCcEEEEeCCc
Confidence 999999999999999986542 5889999999999999999999998 99999999999999999999999999
Q ss_pred ceeecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 789 AKLYEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 789 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
++....... ......||+.|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus 168 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 223 (327)
T 3a62_A 168 CKESIHDGT-VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTG 223 (327)
T ss_dssp C-----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred ccccccCCc-cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCC
Confidence 876433222 22345799999999999988899999999999999999999999964
No 56
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=2e-34 Score=316.48 Aligned_cols=199 Identities=27% Similarity=0.380 Sum_probs=176.4
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCch------hhHHHHHHHHHHHhcCCCceeeEEeEEeeCceE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQ------GNREFVNEIGMISAQQHPNLVKLYGCCVEGNQL 709 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~~------~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 709 (869)
.++|++.+.||+|+||.||+|... +++.||+|+++..... ....+.+|++++++++||||+++++++.+.+..
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 456889999999999999999976 6899999998654321 356789999999999999999999999999999
Q ss_pred EEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCC----cEEEee
Q 002899 710 LLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDL----NAKISD 785 (869)
Q Consensus 710 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~----~~kl~D 785 (869)
++||||+++|+|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++ .+||+|
T Consensus 90 ~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~D 161 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEKE-----SLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIID 161 (326)
T ss_dssp EEEEECCCSCBHHHHHTTSS-----CCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCSSSSSCCEEECC
T ss_pred EEEEEcCCCCCHHHHHHhcC-----CcCHHHHHHHHHHHHHHHHHHHHCC---eEcCCCCHHHEEEecCCCCCCCEEEEE
Confidence 99999999999999986542 6899999999999999999999998 99999999999999887 899999
Q ss_pred cCCceeecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 786 FGLAKLYEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 786 FGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
||++........ .....||+.|+|||++....++.++|||||||++|||++|+.||..
T Consensus 162 fg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~ 219 (326)
T 2y0a_A 162 FGLAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219 (326)
T ss_dssp CTTCEECCTTSC--CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred CCCCeECCCCCc--cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCC
Confidence 999987754322 2345799999999999988999999999999999999999999964
No 57
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.4e-34 Score=322.19 Aligned_cols=201 Identities=25% Similarity=0.413 Sum_probs=176.7
Q ss_pred HHhcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccC--chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEE
Q 002899 635 AATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLL 711 (869)
Q Consensus 635 ~~t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 711 (869)
...++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+++..++
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l 105 (362)
T 2bdw_A 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 105 (362)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 34568999999999999999999975 68999999986543 3345678899999999999999999999999999999
Q ss_pred EEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCC---CcEEEeecCC
Q 002899 712 VYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKD---LNAKISDFGL 788 (869)
Q Consensus 712 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~---~~~kl~DFGl 788 (869)
||||+++|+|.+.+.... .+++..+..++.||++||+|||+++ |+||||||+|||++.+ +.+||+|||+
T Consensus 106 v~e~~~gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~DfG~ 177 (362)
T 2bdw_A 106 VFDLVTGGELFEDIVARE-----FYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGL 177 (362)
T ss_dssp EECCCCSCBHHHHHTTCS-----CCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred EEecCCCCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEeecCc
Confidence 999999999999886543 5899999999999999999999998 9999999999999865 4599999999
Q ss_pred ceeecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 789 AKLYEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 789 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
+........ .....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 178 a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~ 232 (362)
T 2bdw_A 178 AIEVNDSEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD 232 (362)
T ss_dssp CBCCTTCCS--CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ceEecCCcc--cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 987653322 2345799999999999998999999999999999999999999954
No 58
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=9.3e-35 Score=318.91 Aligned_cols=201 Identities=30% Similarity=0.499 Sum_probs=172.8
Q ss_pred cCCCCCCeeeccCceEEEEEEEc----CCcEEEEEEeccc-CchhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEE
Q 002899 638 NNFDPANKVGEGGFGSVYKGILS----DGTVIAVKQLSSK-SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLV 712 (869)
Q Consensus 638 ~~f~~~~~IG~G~fG~Vyka~~~----~g~~VAvK~~~~~-~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 712 (869)
++|++.+.||+|+||.||+|.+. .+..||||+++.. .....++|.+|++++++++||||+++++++.+++..++|
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 128 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence 56788899999999999999974 3456999999765 334456799999999999999999999999999999999
Q ss_pred EEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceee
Q 002899 713 YEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 792 (869)
Q Consensus 713 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~ 792 (869)
|||+++|+|.+++.... ..+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 129 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 201 (325)
T 3kul_A 129 TEYMENGSLDTFLRTHD----GQFTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201 (325)
T ss_dssp EECCTTCBHHHHHHTTT----TCSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred eeCCCCCcHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEECCCCCEEECCCCccccc
Confidence 99999999999996543 26899999999999999999999998 999999999999999999999999999877
Q ss_pred cCCCcc--ccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHc-CCCCCCC
Q 002899 793 EEDKTH--ISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNY 845 (869)
Q Consensus 793 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~ 845 (869)
...... ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||..
T Consensus 202 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~ 257 (325)
T 3kul_A 202 EDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWN 257 (325)
T ss_dssp C----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred ccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCccc
Confidence 543321 1222346778999999998899999999999999999999 9999854
No 59
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=1.1e-34 Score=308.93 Aligned_cols=201 Identities=30% Similarity=0.513 Sum_probs=178.2
Q ss_pred hcCCCCCCeeeccCceEEEEEEEcCCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEEEec
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYM 716 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~~ 716 (869)
.++|++.+.||+|+||.||+|...++..||||+++.... ..+++.+|++++.+++||||+++++++.+.+..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 467888999999999999999998888999999975433 3567899999999999999999999999999999999999
Q ss_pred cCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeecCCC
Q 002899 717 KNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEEDK 796 (869)
Q Consensus 717 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~ 796 (869)
++++|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 86 ~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 158 (268)
T 3sxs_A 86 SNGCLLNYLRSHG----KGLEPSQLLEMCYDVCEGMAFLESHQ---FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ 158 (268)
T ss_dssp TTCBHHHHHHHHG----GGCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCSGGGEEECTTCCEEECCTTCEEECCTTC
T ss_pred CCCcHHHHHHHcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCcceEEECCCCCEEEccCccceecchhh
Confidence 9999999986542 25899999999999999999999998 9999999999999999999999999998776544
Q ss_pred ccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHc-CCCCCCC
Q 002899 797 THISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNY 845 (869)
Q Consensus 797 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~ 845 (869)
........+|+.|+|||++.+..++.++||||||+++|||++ |+.||..
T Consensus 159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~ 208 (268)
T 3sxs_A 159 YVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDL 208 (268)
T ss_dssp EEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred hhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccc
Confidence 333333456778999999998889999999999999999999 9999864
No 60
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=2.3e-34 Score=322.69 Aligned_cols=200 Identities=27% Similarity=0.399 Sum_probs=178.2
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEEEe
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEY 715 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~ 715 (869)
.++|++.+.||+|+||.||+|... +++.||+|++..........+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 467899999999999999999975 6889999999776655667899999999999999999999999999999999999
Q ss_pred ccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcC--CCcEEEeecCCceeec
Q 002899 716 MKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDK--DLNAKISDFGLAKLYE 793 (869)
Q Consensus 716 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~--~~~~kl~DFGla~~~~ 793 (869)
+++|+|.+++.... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++. ++.+||+|||++....
T Consensus 130 ~~gg~L~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~ 202 (387)
T 1kob_A 130 LSGGELFDRIAAED----YKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLN 202 (387)
T ss_dssp CCCCBHHHHTTCTT----CCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTCCCEEECCCTTCEECC
T ss_pred CCCCcHHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccchHHeEEecCCCCceEEEecccceecC
Confidence 99999999886542 25899999999999999999999998 999999999999974 5789999999998775
Q ss_pred CCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 794 EDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 794 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
.... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 203 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~ 252 (387)
T 1kob_A 203 PDEI--VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAG 252 (387)
T ss_dssp TTSC--EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred CCcc--eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCC
Confidence 4332 2234689999999999998999999999999999999999999964
No 61
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.3e-34 Score=321.28 Aligned_cols=204 Identities=25% Similarity=0.379 Sum_probs=175.7
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccC-----chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS-----RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLL 710 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~-----~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 710 (869)
.++|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|+++++.++||||+++++++.+++..+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 457889999999999999999975 68999999985431 123567899999999999999999999999999999
Q ss_pred EEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCc---EEEeecC
Q 002899 711 LVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLN---AKISDFG 787 (869)
Q Consensus 711 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~---~kl~DFG 787 (869)
+||||+++|+|.+.+.... .....+++..+..++.||+.||+|||+++ |+||||||+|||++.++. +||+|||
T Consensus 103 lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivHrDlkp~NIl~~~~~~~~~vkl~Dfg 178 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRA-DAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFG 178 (351)
T ss_dssp EEEECCSSCBHHHHHHHHH-HTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECSSSTTCCEEECCCT
T ss_pred EEEeCCCCCCHHHHHHHhc-ccCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChHHeEEecCCCCCcEEEecCc
Confidence 9999999999988775432 12235899999999999999999999998 999999999999987654 9999999
Q ss_pred CceeecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 788 LAKLYEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 788 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 179 ~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~ 235 (351)
T 3c0i_A 179 VAIQLGESGL-VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG 235 (351)
T ss_dssp TCEECCTTSC-BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCS
T ss_pred ceeEecCCCe-eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCC
Confidence 9987764332 22345799999999999988899999999999999999999999964
No 62
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=6.7e-34 Score=309.18 Aligned_cols=215 Identities=44% Similarity=0.707 Sum_probs=186.8
Q ss_pred CCcccHHHHHHHhcCCCCC------CeeeccCceEEEEEEEcCCcEEEEEEecccC----chhhHHHHHHHHHHHhcCCC
Q 002899 625 TGLYTLRQIKAATNNFDPA------NKVGEGGFGSVYKGILSDGTVIAVKQLSSKS----RQGNREFVNEIGMISAQQHP 694 (869)
Q Consensus 625 ~~~~~~~~i~~~t~~f~~~------~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~----~~~~~~f~~E~~~l~~l~H~ 694 (869)
...+++.++..++++|+.. +.||+|+||.||+|.. +++.||||++.... ....+.+.+|++++++++||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 3578999999999999888 8999999999999987 57899999986532 23356789999999999999
Q ss_pred ceeeEEeEEeeCceEEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEE
Q 002899 695 NLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVL 774 (869)
Q Consensus 695 nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NIL 774 (869)
||+++++++.+.+..++||||+++|+|.+++.... ....+++..+..++.|+++||+|||+.+ |+||||||+||+
T Consensus 91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nil 165 (307)
T 2nru_A 91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD--GTPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANIL 165 (307)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGG--GCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEE
T ss_pred CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhcc--CCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEE
Confidence 99999999999999999999999999999986532 2236899999999999999999999998 999999999999
Q ss_pred EcCCCcEEEeecCCceeecCCCc-cccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 002899 775 LDKDLNAKISDFGLAKLYEEDKT-HISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNYR 846 (869)
Q Consensus 775 l~~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~ 846 (869)
++.++.+||+|||++........ .......||+.|+|||.+.+ .++.++||||||+++|||++|+.||...
T Consensus 166 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~ 237 (307)
T 2nru_A 166 LDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEH 237 (307)
T ss_dssp ECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTT
T ss_pred EcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccC
Confidence 99999999999999987654322 22234578999999998765 5789999999999999999999999753
No 63
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=2.8e-34 Score=315.79 Aligned_cols=205 Identities=22% Similarity=0.290 Sum_probs=177.5
Q ss_pred hcCCCCCCeeeccCceEEEEEEE-cCCcEEEEEEecccCchhhHHHHHHHHHHHhc-CCCceeeEEeEEeeCceEEEEEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQLLLVYE 714 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~-~~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~E 714 (869)
.++|++.+.||+|+||.||+|.. .+++.||||++..... ...+..|+++++++ +||||+++++++..++..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 46788999999999999999996 4789999999865432 35688999999999 99999999999999999999999
Q ss_pred eccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCc-----EEEeecCCc
Q 002899 715 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLN-----AKISDFGLA 789 (869)
Q Consensus 715 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~-----~kl~DFGla 789 (869)
|+ +++|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++. +||+|||++
T Consensus 86 ~~-~~~L~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~~---iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a 157 (330)
T 2izr_A 86 LL-GPSLEDLFDLCD----RTFSLKTVLMIAIQLISRMEYVHSKN---LIYRDVKPENFLIGRPGNKTQQVIHIIDFALA 157 (330)
T ss_dssp CC-CCBHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTCTTSEEECCCTTC
T ss_pred eC-CCCHHHHHHHcC----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeeccCCCCCCceEEEEEcccc
Confidence 99 899999987542 26899999999999999999999998 999999999999998887 999999999
Q ss_pred eeecCCCcc------ccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcch
Q 002899 790 KLYEEDKTH------ISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNYRPNEDF 851 (869)
Q Consensus 790 ~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~ 851 (869)
+.+...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....++.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~ 225 (330)
T 2izr_A 158 KEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTL 225 (330)
T ss_dssp EESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSH
T ss_pred eeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccH
Confidence 876543321 12346799999999999999999999999999999999999999976544433
No 64
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=2.9e-34 Score=334.20 Aligned_cols=202 Identities=31% Similarity=0.419 Sum_probs=178.7
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccC---chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLV 712 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 712 (869)
.++|++.++||+|+||.||+|+.. +|+.||||++.... ......+.+|+++++.++|||||++++++.+.+..++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 467889999999999999999975 68999999986532 23345688999999999999999999999999999999
Q ss_pred EEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceee
Q 002899 713 YEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 792 (869)
Q Consensus 713 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~ 792 (869)
|||+++|+|.+++..... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++++||+|||+++..
T Consensus 263 mEy~~gg~L~~~l~~~~~---~~l~e~~~~~i~~qIl~aL~yLH~~g---IvHrDLKPeNILld~~g~vKL~DFGla~~~ 336 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQ---AGFPEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHV 336 (576)
T ss_dssp ECCCCSCBHHHHHHSSSS---CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEcCCCCcHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCchheEEEeCCCCeEEEecccceec
Confidence 999999999999876432 25899999999999999999999998 999999999999999999999999999876
Q ss_pred cCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 002899 793 EEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNYR 846 (869)
Q Consensus 793 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~ 846 (869)
..... ....+||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 337 ~~~~~--~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~ 388 (576)
T 2acx_A 337 PEGQT--IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQR 388 (576)
T ss_dssp CTTCC--EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCS
T ss_pred ccCcc--ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCccc
Confidence 54322 22357999999999999988999999999999999999999999764
No 65
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=2e-34 Score=328.84 Aligned_cols=202 Identities=23% Similarity=0.360 Sum_probs=176.0
Q ss_pred HHhcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccC--chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEE
Q 002899 635 AATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLL 711 (869)
Q Consensus 635 ~~t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 711 (869)
...++|++.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|+++++.++|||||++++++.+++..++
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 87 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL 87 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence 34577999999999999999999865 68999999987543 2335678899999999999999999999999999999
Q ss_pred EEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEc---CCCcEEEeecCC
Q 002899 712 VYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLD---KDLNAKISDFGL 788 (869)
Q Consensus 712 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~---~~~~~kl~DFGl 788 (869)
||||+++|+|.+.+.... .+++..+..++.||+.||+|||+++ |+||||||+|||++ .++.+||+|||+
T Consensus 88 v~E~~~gg~L~~~i~~~~-----~~~e~~~~~i~~qil~aL~~lH~~g---ivHrDlKp~NIll~~~~~~~~vkL~DFG~ 159 (444)
T 3soa_A 88 IFDLVTGGELFEDIVARE-----YYSEADASHCIQQILEAVLHCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGL 159 (444)
T ss_dssp EECCCBCCBHHHHHHHCS-----CCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSSTTEEESBSSTTCCEEECCCSS
T ss_pred EEEeCCCCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEeccCCCCcEEEccCce
Confidence 999999999999887653 5899999999999999999999998 99999999999998 568899999999
Q ss_pred ceeecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 789 AKLYEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 789 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
+........ ......||+.|+|||++.+..++.++||||+||++|||++|++||..
T Consensus 160 a~~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~ 215 (444)
T 3soa_A 160 AIEVEGEQQ-AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWD 215 (444)
T ss_dssp CBCCCTTCC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred eEEecCCCc-eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCC
Confidence 987654332 22346799999999999998999999999999999999999999954
No 66
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=100.00 E-value=3.7e-34 Score=327.76 Aligned_cols=321 Identities=16% Similarity=0.183 Sum_probs=227.7
Q ss_pred cceEecCCCCcceEEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhh
Q 002899 43 SNVTCDCSSATCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVL 121 (869)
Q Consensus 43 ~~v~C~~~~~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~ 121 (869)
|+..|.|... ...+++.+.+++ .+|..+. ++|+.|+|++|+|+.+.+..|..+ +|++|+|++|+++++.+..|
T Consensus 35 Cp~~C~C~~~---~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~ 108 (440)
T 3zyj_A 35 CPSVCSCSNQ---FSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF 108 (440)
T ss_dssp CCSSSEECTT---SCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGG
T ss_pred CCCCCEeCCC---CCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhc
Confidence 3445666543 346788889998 6777665 689999999999998888888877 78888888888888888888
Q ss_pred cCccccccccccccccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccC-CcCCCCCccccCCCCccc
Q 002899 122 TNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISD-NNFSGKIPEFIGKWKKIQ 200 (869)
Q Consensus 122 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~ 200 (869)
.++++|++|+|++|+|+...+..|..+++|++|+|++|+|+...+..|.++++|++|+|++ |.+....+..|.++++|+
T Consensus 109 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~ 188 (440)
T 3zyj_A 109 NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLR 188 (440)
T ss_dssp TTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCC
T ss_pred cCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccC
Confidence 8888888888888888866666788888888888888888876677788888888888888 445544455678888888
Q ss_pred EEEccCCcCCCCchHhhhcCCCCCEEEcCCCCCCCCcccccccccceEEEcccccCccCCCcccCCCCCcCEEeccCCCC
Q 002899 201 KLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNL 280 (869)
Q Consensus 201 ~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l 280 (869)
.|+|++|.++.. | .+..+++|+.| +|++|+|++..|..|.++++|+.|+|++|+|
T Consensus 189 ~L~L~~n~l~~~-~-~~~~l~~L~~L-----------------------~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l 243 (440)
T 3zyj_A 189 YLNLAMCNLREI-P-NLTPLIKLDEL-----------------------DLSGNHLSAIRPGSFQGLMHLQKLWMIQSQI 243 (440)
T ss_dssp EEECTTSCCSSC-C-CCTTCSSCCEE-----------------------ECTTSCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred eecCCCCcCccc-c-ccCCCcccCEE-----------------------ECCCCccCccChhhhccCccCCEEECCCCce
Confidence 888888887733 3 24555555555 5556666666666666677777777777777
Q ss_pred CCCCchhhhcCCCCCEEEeeCCcCCCCCchhh--hccCCceeeeccCccCCCCCCCCCCCCCccceeccCCCCCCCCCCc
Q 002899 281 TGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYI--FNSNKNVDISLNNFTWESSDPIECPRGSVNLVESYSSPRNKLDKVH 358 (869)
Q Consensus 281 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~--~~~l~~l~ls~N~~~~~~~~p~~C~c~~~~~~~~l~~~~~~~~~~~ 358 (869)
++..+..|.++++|+.|+|++|+|++..+..+ +..++.|+|++| ||.|||++.|+..|++......
T Consensus 244 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N--------p~~CdC~l~~l~~~~~~~~~~~---- 311 (440)
T 3zyj_A 244 QVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHN--------PWNCNCDILWLSWWIKDMAPSN---- 311 (440)
T ss_dssp CEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSS--------CEECSSTTHHHHHHHHTTSCSS----
T ss_pred eEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCC--------CccCCCCchHHHHHHHhccccC----
Confidence 66666666667777777777777765444433 345666777766 9999999999999987642211
Q ss_pred CccCCCCCCCCCcccccceee------eecCCcceecCCceeccCccCccccccccc
Q 002899 359 PCLRQNFPCSAPADQYHYTLH------INCGGAKINTGHTKYEADMEARGASMFYSS 409 (869)
Q Consensus 359 ~~~~~~~~C~~p~~~~~~~~~------~~c~~~~~~~~~~~~~~d~~~~~~~~~~~~ 409 (869)
......|+.|+..+|+.+. ..|..|.+...+..... .++......|..
T Consensus 312 --~~~~~~C~~P~~l~g~~l~~l~~~~~~C~~P~i~~~~~~~~v-~~G~~v~L~C~~ 365 (440)
T 3zyj_A 312 --TACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPPADLNV-TEGMAAELKCRA 365 (440)
T ss_dssp --CSCCCBEEESTTTTTCBCC----CCSCCCCCCEEECCCCEEE-CTTSCCEECCEE
T ss_pred --CccccCCCChhHhcCccHhHhhhhhccCCCCcccccccceee-ccCceEEEEeec
Confidence 1124579999988887654 46888777654433322 234444445543
No 67
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.2e-34 Score=324.03 Aligned_cols=202 Identities=30% Similarity=0.510 Sum_probs=164.2
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc----CCcEEEEEEecccC-chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS----DGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLL 711 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~----~g~~VAvK~~~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 711 (869)
.++|++.+.||+|+||.||+|+.. ++..||||+++... ....++|.+|++++++++||||+++++++.+.+..++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 357889999999999999999865 46789999997653 3345689999999999999999999999999999999
Q ss_pred EEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCcee
Q 002899 712 VYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKL 791 (869)
Q Consensus 712 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~ 791 (869)
||||+++|+|.+++.... ..+++..+..++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 124 v~e~~~~~sL~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 196 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKHD----AQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRV 196 (373)
T ss_dssp EEECCTTCBHHHHHHTTT----TCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred EEeCCCCCcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEEcCCCCEEECcCccccc
Confidence 999999999999997543 26899999999999999999999997 99999999999999999999999999987
Q ss_pred ecCCCccc--cccccccccccchhhcccCCCCchhHHHHHHHHHHHHHc-CCCCCCC
Q 002899 792 YEEDKTHI--STRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNY 845 (869)
Q Consensus 792 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~ 845 (869)
........ .....+++.|+|||++....++.++||||||+++|||++ |+.||..
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~ 253 (373)
T 2qol_A 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 253 (373)
T ss_dssp -----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTT
T ss_pred cccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCC
Confidence 65432211 112235678999999999999999999999999999998 9999854
No 68
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=8e-35 Score=319.02 Aligned_cols=199 Identities=32% Similarity=0.469 Sum_probs=170.3
Q ss_pred hcCCCCCCeeeccCceEEEEEEEcCCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCceeeEEeEEeeCc----eEEEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGN----QLLLV 712 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~----~~~lV 712 (869)
.++|++.++||+|+||.||+|+.. ++.||||++.... .....+..|+.++.+++|||||++++++.... ..++|
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv 100 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI 100 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence 467889999999999999999876 7899999996543 23445667888999999999999999998744 47999
Q ss_pred EEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhc----------CCCCeEEcCCCCCCEEEcCCCcEE
Q 002899 713 YEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHED----------SRIKIVHRDIKTSNVLLDKDLNAK 782 (869)
Q Consensus 713 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~----------~~~~iiH~Dlk~~NILl~~~~~~k 782 (869)
|||+++|+|.+++... .+++..+..++.|+++||+|||+. + |+||||||+|||++.++.+|
T Consensus 101 ~e~~~~g~L~~~l~~~------~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~---ivH~Dlkp~Nill~~~~~~k 171 (322)
T 3soc_A 101 TAFHEKGSLSDFLKAN------VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA---ISHRDIKSKNVLLKNNLTAC 171 (322)
T ss_dssp EECCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE---EECSCCSGGGEEECTTCCEE
T ss_pred EecCCCCCHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC---EEeCCCChHhEEECCCCeEE
Confidence 9999999999999653 489999999999999999999988 6 99999999999999999999
Q ss_pred EeecCCceeecCCCcc-ccccccccccccchhhcccC-----CCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 002899 783 ISDFGLAKLYEEDKTH-ISTRIAGTIGYMAPEYAMRG-----YLTSKADVYSFGVVTLEIVSGKSNTNYR 846 (869)
Q Consensus 783 l~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~-----~~~~k~DvwSlGvil~elltG~~p~~~~ 846 (869)
|+|||+++........ ......||+.|+|||++.+. .++.++|||||||++|||++|+.||...
T Consensus 172 L~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~ 241 (322)
T 3soc_A 172 IADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGP 241 (322)
T ss_dssp ECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSC
T ss_pred EccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCC
Confidence 9999999877543322 22335789999999998763 4567889999999999999999999653
No 69
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=3.5e-34 Score=313.17 Aligned_cols=205 Identities=29% Similarity=0.481 Sum_probs=161.6
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCc-hhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR-QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 714 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~-~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 714 (869)
.++|++.+.||+|+||.||+|... +++.||+|+++.... .....+.+|++++++++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 467899999999999999999965 689999999875432 234678899999999999999999999999999999999
Q ss_pred eccCCchhhhhhcCCc-ccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeec
Q 002899 715 YMKNNCLSRAIFGKDT-EYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 793 (869)
Q Consensus 715 ~~~~gsL~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~ 793 (869)
|++ |+|.+++..... .....+++..+..++.||++||+|||+.+ |+||||||+|||++.++.+||+|||++....
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 998 589888754321 11235899999999999999999999998 9999999999999999999999999998765
Q ss_pred CCCccccccccccccccchhhccc-CCCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 002899 794 EDKTHISTRIAGTIGYMAPEYAMR-GYLTSKADVYSFGVVTLEIVSGKSNTNYR 846 (869)
Q Consensus 794 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~ 846 (869)
.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 160 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 212 (317)
T 2pmi_A 160 IPVN-TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGT 212 (317)
T ss_dssp SCCC-CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred CCcc-cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 3322 1223568999999999876 46899999999999999999999999653
No 70
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=8.6e-35 Score=324.58 Aligned_cols=200 Identities=27% Similarity=0.393 Sum_probs=167.0
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCc---hhhHHHHHHHHH-HHhcCCCceeeEEeEEeeCceEEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR---QGNREFVNEIGM-ISAQQHPNLVKLYGCCVEGNQLLL 711 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~---~~~~~f~~E~~~-l~~l~H~nIv~l~~~~~~~~~~~l 711 (869)
.++|++.++||+|+||.||+|+.. +++.||||+++.... .....+..|..+ ++.++||||+++++++.+.+..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 357889999999999999999976 578999999875432 223456667665 567899999999999999999999
Q ss_pred EEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCcee
Q 002899 712 VYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKL 791 (869)
Q Consensus 712 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~ 791 (869)
||||+++|+|.+++.... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++++||+|||+++.
T Consensus 117 v~E~~~gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~ikL~DFG~a~~ 188 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRER-----CFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKE 188 (373)
T ss_dssp EEECCCSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCBCGG
T ss_pred EEeCCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEeeCccccc
Confidence 999999999999986542 5889999999999999999999998 99999999999999999999999999976
Q ss_pred ecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 792 YEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 792 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
...... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 189 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~ 241 (373)
T 2r5t_A 189 NIEHNS-TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYS 241 (373)
T ss_dssp GBCCCC-CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred cccCCC-ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCC
Confidence 433222 23346799999999999999999999999999999999999999964
No 71
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.5e-34 Score=310.48 Aligned_cols=201 Identities=27% Similarity=0.489 Sum_probs=174.6
Q ss_pred hcCCCCCCeeeccCceEEEEEEEcCCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEEEec
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYM 716 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~~ 716 (869)
.++|++.+.||+|+||.||+|.+.++..||||+++.... ..+++.+|++++.+++||||+++++++.+.+..++||||+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 101 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 101 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence 457888999999999999999999888999999976533 3567999999999999999999999999999999999999
Q ss_pred cCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeecCCC
Q 002899 717 KNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEEDK 796 (869)
Q Consensus 717 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~ 796 (869)
++++|.+++.... ..+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++.......
T Consensus 102 ~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 174 (283)
T 3gen_A 102 ANGCLLNYLREMR----HRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 174 (283)
T ss_dssp TTCBHHHHHHCGG----GCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH
T ss_pred CCCcHHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCccceEEEcCCCCEEEccccccccccccc
Confidence 9999999996532 25899999999999999999999998 9999999999999999999999999998665432
Q ss_pred ccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHc-CCCCCCC
Q 002899 797 THISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNY 845 (869)
Q Consensus 797 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~ 845 (869)
........+|+.|+|||++....++.++||||||+++|||++ |+.||..
T Consensus 175 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~ 224 (283)
T 3gen_A 175 YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 224 (283)
T ss_dssp HHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred cccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence 222233456788999999998899999999999999999998 9999864
No 72
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.7e-34 Score=317.66 Aligned_cols=197 Identities=27% Similarity=0.452 Sum_probs=172.6
Q ss_pred cCCCCCCeeeccCceEEEEEEE-cCCcEEEEEEecccC---chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEE
Q 002899 638 NNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 713 (869)
Q Consensus 638 ~~f~~~~~IG~G~fG~Vyka~~-~~g~~VAvK~~~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 713 (869)
++|.+.+.||+|+||.||+|.. .+++.||||++.... ......+.+|+++++.++||||+++++++...+..++||
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 88 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI 88 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5788999999999999999997 478999999986432 222457889999999999999999999999999999999
Q ss_pred EeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeec
Q 002899 714 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 793 (869)
Q Consensus 714 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~ 793 (869)
||+ +|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++....
T Consensus 89 E~~-~g~l~~~l~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~ 159 (336)
T 3h4j_B 89 EYA-GGELFDYIVEKK-----RMTEDEGRRFFQQIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMT 159 (336)
T ss_dssp CCC-CEEHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCSTTTEEECTTCCEEECCSSCTBTTT
T ss_pred ECC-CCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCchhhEEEcCCCCEEEEEeccceecc
Confidence 999 678888886542 6899999999999999999999998 9999999999999999999999999998765
Q ss_pred CCCccccccccccccccchhhcccCCC-CchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 794 EDKTHISTRIAGTIGYMAPEYAMRGYL-TSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 794 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
... ......||+.|+|||++.+..+ ++++|||||||++|||++|+.||..
T Consensus 160 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~ 210 (336)
T 3h4j_B 160 DGN--FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDD 210 (336)
T ss_dssp TSB--TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBC
T ss_pred CCc--ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCC
Confidence 432 2234579999999999987765 7899999999999999999999964
No 73
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=7.3e-34 Score=306.71 Aligned_cols=198 Identities=22% Similarity=0.396 Sum_probs=169.9
Q ss_pred cCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCc--hhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEEE
Q 002899 638 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR--QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 714 (869)
Q Consensus 638 ~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~--~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 714 (869)
++|++.+.||+|+||+||+|... +++.||||++..... .....+.+|++++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 46888999999999999999975 688999999875432 334678899999999999999999999999999999999
Q ss_pred eccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeecC
Q 002899 715 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEE 794 (869)
Q Consensus 715 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~~ 794 (869)
|+++ ++.+.+.... ..+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++.....
T Consensus 82 ~~~~-~l~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lH~~~---ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 153 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCN----GDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGI 153 (292)
T ss_dssp CCSE-EHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCS
T ss_pred cCCC-CHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceecCC
Confidence 9986 4555443322 26899999999999999999999998 99999999999999999999999999987654
Q ss_pred CCccccccccccccccchhhcccCC-CCchhHHHHHHHHHHHHHcCCCCCC
Q 002899 795 DKTHISTRIAGTIGYMAPEYAMRGY-LTSKADVYSFGVVTLEIVSGKSNTN 844 (869)
Q Consensus 795 ~~~~~~~~~~gt~~y~aPE~~~~~~-~~~k~DvwSlGvil~elltG~~p~~ 844 (869)
... ......||+.|+|||++.+.. ++.++|||||||++|||++|+.|+.
T Consensus 154 ~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~ 203 (292)
T 3o0g_A 154 PVR-CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLF 203 (292)
T ss_dssp CCS-CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSC
T ss_pred ccc-cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCc
Confidence 322 223456899999999997765 7999999999999999999998864
No 74
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=3.7e-34 Score=314.33 Aligned_cols=202 Identities=25% Similarity=0.450 Sum_probs=171.9
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccC-chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCc-------
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGN------- 707 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~------- 707 (869)
.++|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 457889999999999999999986 78999999987543 334578999999999999999999999986643
Q ss_pred --------------------------------------------------eEEEEEEeccCCchhhhhhcCCcccccCCC
Q 002899 708 --------------------------------------------------QLLLVYEYMKNNCLSRAIFGKDTEYRLKLD 737 (869)
Q Consensus 708 --------------------------------------------------~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~ 737 (869)
..++||||+++|+|.+++..... ....+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~ 162 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS--LEDRE 162 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS--GGGSC
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC--ccchh
Confidence 27999999999999999976543 23567
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeecCCCc-----------ccccccccc
Q 002899 738 WPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEEDKT-----------HISTRIAGT 806 (869)
Q Consensus 738 ~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~~-----------~~~~~~~gt 806 (869)
+..+..++.||++||+|||+++ |+||||||+|||++.++.+||+|||+++....... .......||
T Consensus 163 ~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt 239 (332)
T 3qd2_B 163 HGVCLHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGT 239 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-C
T ss_pred hHHHHHHHHHHHHHHHHHHhCC---eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCC
Confidence 8889999999999999999998 99999999999999999999999999987765421 112235699
Q ss_pred ccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCC
Q 002899 807 IGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNT 843 (869)
Q Consensus 807 ~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~ 843 (869)
+.|+|||++.+..++.++||||||+++|||++|..|+
T Consensus 240 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~ 276 (332)
T 3qd2_B 240 KLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQ 276 (332)
T ss_dssp GGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCH
T ss_pred cCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCCh
Confidence 9999999999999999999999999999999998765
No 75
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=4.5e-34 Score=340.73 Aligned_cols=322 Identities=20% Similarity=0.214 Sum_probs=210.2
Q ss_pred cceEEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhhcCcccccccc
Q 002899 53 TCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLS 131 (869)
Q Consensus 53 ~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 131 (869)
..+++.|+|++|.+++..+..|.++++|++|+|++|.|+++.+..|..+ +|++|+|++|++++..|..|+++++|++|+
T Consensus 31 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 110 (606)
T 3vq2_A 31 PSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLV 110 (606)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEE
T ss_pred CCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEE
Confidence 4567888888888887777788888888888888888887777777776 788888888888877777788888888888
Q ss_pred ccccccCCCCCccccCCCCccEEEeecccccc-cCCccccCCCCCCeEeccCCcCCCCCcccc-----------------
Q 002899 132 IEGNLFTGSIPPDIRKLINLQKLILSSNSFTG-ELPAELTKLTNLNDLRISDNNFSGKIPEFI----------------- 193 (869)
Q Consensus 132 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~----------------- 193 (869)
|++|.+++..+..|+++++|++|+|++|++++ .+|..|.++++|++|+|++|++++..+..|
T Consensus 111 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~ 190 (606)
T 3vq2_A 111 AVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSL 190 (606)
T ss_dssp CTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTT
T ss_pred ccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccC
Confidence 88887776665667777777777777777765 456667777777777777666554322211
Q ss_pred --------------------------------------------------------------------------------
Q 002899 194 -------------------------------------------------------------------------------- 193 (869)
Q Consensus 194 -------------------------------------------------------------------------------- 193 (869)
T Consensus 191 n~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~ 270 (606)
T 3vq2_A 191 NPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTY 270 (606)
T ss_dssp CCCCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECC
T ss_pred CCcceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccc
Confidence
Q ss_pred ----------------------------------------------------------------------------CCCC
Q 002899 194 ----------------------------------------------------------------------------GKWK 197 (869)
Q Consensus 194 ----------------------------------------------------------------------------~~l~ 197 (869)
..++
T Consensus 271 ~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l~ 350 (606)
T 3vq2_A 271 TNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQLKQFPTLDLPFLKSLTLTMNKGSISFKKVALP 350 (606)
T ss_dssp CTTCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCCSSCCCCCCSSCCEEEEESCSSCEECCCCCCT
T ss_pred cccccccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccCcccccCCCCccceeeccCCcCccchhhccCC
Confidence 0112
Q ss_pred cccEEEccCCcCC-------------------------------------------------CCch-HhhhcCCCCCEEE
Q 002899 198 KIQKLHIQGSSLE-------------------------------------------------GPIP-ASISALTSLTDLR 227 (869)
Q Consensus 198 ~L~~L~L~~N~l~-------------------------------------------------~~~~-~~l~~l~~L~~L~ 227 (869)
+|+.|+|++|.++ +..+ ..+..+++|+.|+
T Consensus 351 ~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ 430 (606)
T 3vq2_A 351 SLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAIIMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLD 430 (606)
T ss_dssp TCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEEECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEE
T ss_pred CCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccccchhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEE
Confidence 2333333333322 2222 2333344444444
Q ss_pred cCCCCCCCCcccccc-cccceEEEcccccCcc-CCCcccCCCCCcCEEeccCCCCCCCCchhhhcCCCCCEEEeeCCcCC
Q 002899 228 ISDLKGSESAFPKLD-KMNLKTLILTKCLIHG-EIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLT 305 (869)
Q Consensus 228 L~~n~~~~~~~~~~~-~~~L~~L~Ls~N~i~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 305 (869)
+++|.+.......+. ..+|+.|+|++|++++ .+|..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|+++
T Consensus 431 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 510 (606)
T 3vq2_A 431 ISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLL 510 (606)
T ss_dssp CTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCS
T ss_pred CcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCC
Confidence 444444332222222 2267777777777776 36777777888888888888888777777888888888888888888
Q ss_pred CCCchhh--hccCCceeeeccCcc----------------CCCCCCCCCCCCCccceeccCCCCCCCCCCcCccCCCCCC
Q 002899 306 GPVPKYI--FNSNKNVDISLNNFT----------------WESSDPIECPRGSVNLVESYSSPRNKLDKVHPCLRQNFPC 367 (869)
Q Consensus 306 ~~~p~~~--~~~l~~l~ls~N~~~----------------~~~~~p~~C~c~~~~~~~~l~~~~~~~~~~~~~~~~~~~C 367 (869)
+..|..+ +..++.|+|++|+++ .+..|||.|+|++.|++.|++........ .....|
T Consensus 511 ~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~c~c~~~~~~~~l~~~~~~~~~-----~~~~~C 585 (606)
T 3vq2_A 511 FLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVACICEHQKFLQWVKEQKQFLVN-----VEQMTC 585 (606)
T ss_dssp CEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCCCCSSTTHHHHTTTTTSSSSBSS-----GGGCCC
T ss_pred CcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCcccCCccHHHHHHHHcCcccccC-----Ccccee
Confidence 7777766 456778888888764 23467999999999999999765443322 245789
Q ss_pred CCCcccccceee
Q 002899 368 SAPADQYHYTLH 379 (869)
Q Consensus 368 ~~p~~~~~~~~~ 379 (869)
+.|+...++.+.
T Consensus 586 ~~p~~~~~~~l~ 597 (606)
T 3vq2_A 586 ATPVEMNTSLVL 597 (606)
T ss_dssp C-----------
T ss_pred CCChHhCCCEee
Confidence 888877766543
No 76
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=4.1e-34 Score=309.62 Aligned_cols=199 Identities=28% Similarity=0.406 Sum_probs=167.9
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCc--------------------------hhhHHHHHHHHHHH
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR--------------------------QGNREFVNEIGMIS 689 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~--------------------------~~~~~f~~E~~~l~ 689 (869)
.++|++.+.||+|+||.||+|... +++.||||++..... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 357889999999999999999975 688999999865421 11356889999999
Q ss_pred hcCCCceeeEEeEEee--CceEEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcC
Q 002899 690 AQQHPNLVKLYGCCVE--GNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRD 767 (869)
Q Consensus 690 ~l~H~nIv~l~~~~~~--~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~D 767 (869)
+++||||+++++++.+ .+..++||||+++++|.+++.. ..+++..+..++.|+++||+|||+++ |+|||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~D 162 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL------KPLSEDQARFYFQDLIKGIEYLHYQK---IIHRD 162 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS------SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccC
Confidence 9999999999999986 5688999999999999876532 26899999999999999999999998 99999
Q ss_pred CCCCCEEEcCCCcEEEeecCCceeecCCCccccccccccccccchhhcccCC---CCchhHHHHHHHHHHHHHcCCCCCC
Q 002899 768 IKTSNVLLDKDLNAKISDFGLAKLYEEDKTHISTRIAGTIGYMAPEYAMRGY---LTSKADVYSFGVVTLEIVSGKSNTN 844 (869)
Q Consensus 768 lk~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~k~DvwSlGvil~elltG~~p~~ 844 (869)
|||+|||++.++.+||+|||++......... .....||+.|+|||++.... .+.++||||||+++|||++|+.||.
T Consensus 163 lkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~ 241 (298)
T 2zv2_A 163 IKPSNLLVGEDGHIKIADFGVSNEFKGSDAL-LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFM 241 (298)
T ss_dssp CCGGGEEECTTSCEEECCCTTCEECSSSSCE-ECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred CCHHHEEECCCCCEEEecCCCcccccccccc-ccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCC
Confidence 9999999999999999999999876543322 23457999999999987654 4789999999999999999999995
Q ss_pred C
Q 002899 845 Y 845 (869)
Q Consensus 845 ~ 845 (869)
.
T Consensus 242 ~ 242 (298)
T 2zv2_A 242 D 242 (298)
T ss_dssp C
T ss_pred C
Confidence 4
No 77
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=5.2e-34 Score=312.05 Aligned_cols=202 Identities=23% Similarity=0.338 Sum_probs=174.6
Q ss_pred cCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccC-chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCc--eEEEEE
Q 002899 638 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGN--QLLLVY 713 (869)
Q Consensus 638 ~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~--~~~lV~ 713 (869)
++|.+.++||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++...+ ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 56888999999999999999976 58999999987543 233567889999999999999999999998765 789999
Q ss_pred EeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEE----cCCCcEEEeecCCc
Q 002899 714 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLL----DKDLNAKISDFGLA 789 (869)
Q Consensus 714 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl----~~~~~~kl~DFGla 789 (869)
||+++|+|.+++..... ...+++..+..++.|+++||+|||+.+ |+||||||+|||+ +.++.+||+|||++
T Consensus 89 e~~~~~~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a 163 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSN--AYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (319)
T ss_dssp ECCTTCBHHHHHHSGGG--TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEECTTSCEEEEECCCTTC
T ss_pred eCCCCCCHHHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEeccCCCCceEEEccCCCc
Confidence 99999999999976432 224899999999999999999999998 9999999999999 77888999999999
Q ss_pred eeecCCCccccccccccccccchhhcc--------cCCCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 002899 790 KLYEEDKTHISTRIAGTIGYMAPEYAM--------RGYLTSKADVYSFGVVTLEIVSGKSNTNYR 846 (869)
Q Consensus 790 ~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~k~DvwSlGvil~elltG~~p~~~~ 846 (869)
+....... .....||+.|+|||++. ...++.++|||||||++|||++|+.||...
T Consensus 164 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 226 (319)
T 4euu_A 164 RELEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPF 226 (319)
T ss_dssp EECCTTCC--BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECT
T ss_pred eecCCCCc--eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 87754432 22356899999999986 467899999999999999999999999653
No 78
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=2.5e-34 Score=309.82 Aligned_cols=200 Identities=28% Similarity=0.447 Sum_probs=170.5
Q ss_pred cCCCCCCeeeccCceEEEEEEEcCCcEEEEEEecccCc--hhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEEEe
Q 002899 638 NNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSR--QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEY 715 (869)
Q Consensus 638 ~~f~~~~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~~--~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~ 715 (869)
++|++.+.||+|+||.||+|+..+++.||+|++..... .....+.+|++++++++||||+++++++..++..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 46888999999999999999998899999999865432 2246788999999999999999999999999999999999
Q ss_pred ccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeecCC
Q 002899 716 MKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEED 795 (869)
Q Consensus 716 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~ 795 (869)
+++ +|.+++.... ..+++..+..++.|+++||+|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 82 ~~~-~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 153 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCE----GGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIP 153 (288)
T ss_dssp CSE-EHHHHHHTST----TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-
T ss_pred cCC-CHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEeECccccccCcc
Confidence 985 8888886542 25899999999999999999999998 999999999999999999999999999766432
Q ss_pred Cccccccccccccccchhhccc-CCCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 002899 796 KTHISTRIAGTIGYMAPEYAMR-GYLTSKADVYSFGVVTLEIVSGKSNTNYR 846 (869)
Q Consensus 796 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~ 846 (869)
.. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 154 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 204 (288)
T 1ob3_A 154 VR-KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGV 204 (288)
T ss_dssp ---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cc-ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 22 1223468999999999875 45899999999999999999999999653
No 79
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=6.9e-34 Score=330.32 Aligned_cols=205 Identities=29% Similarity=0.421 Sum_probs=179.6
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccC---chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLV 712 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 712 (869)
.++|.+.++||+|+||.||+|+.. +|+.||+|++.... ......+..|++++++++||||+++++++...+..++|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 357888899999999999999985 68999999986542 22346788999999999999999999999999999999
Q ss_pred EEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceee
Q 002899 713 YEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 792 (869)
Q Consensus 713 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~ 792 (869)
|||+++|+|.+++..... ....+++..+..++.||+.||+|||+++ |+||||||+|||++.++++||+|||+++..
T Consensus 264 mE~~~gg~L~~~l~~~~~-~~~~l~e~~~~~~~~qi~~aL~~LH~~g---IvHrDLKP~NILl~~~g~vkL~DFGla~~~ 339 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDE-DNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVEL 339 (543)
T ss_dssp ECCCTTCBHHHHHHTSST-TSCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEeccCCCHHHHHHHhhc-ccccccHHHHHHHHHHHHHHHHHHHHcC---CcccCCChHHEEEeCCCCEEEeecceeeec
Confidence 999999999999876432 2236899999999999999999999998 999999999999999999999999999876
Q ss_pred cCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 002899 793 EEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNYR 846 (869)
Q Consensus 793 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~ 846 (869)
...... ....+||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 340 ~~~~~~-~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~ 392 (543)
T 3c4z_A 340 KAGQTK-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRAR 392 (543)
T ss_dssp CTTCCC-BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCT
T ss_pred cCCCcc-cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCC
Confidence 543322 23357999999999999999999999999999999999999999754
No 80
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=7.9e-35 Score=333.81 Aligned_cols=200 Identities=28% Similarity=0.363 Sum_probs=166.3
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEeccc---CchhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSK---SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLV 712 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~---~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 712 (869)
.++|++.+.||+|+||.||+|... +++.||||+++.. .......+.+|+++++.++||||+++++++...+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 357889999999999999999975 6899999998753 233346678899999999999999999999999999999
Q ss_pred EEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEEcCCCCCCEEEcCCCcEEEeecCCcee
Q 002899 713 YEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHE-DSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKL 791 (869)
Q Consensus 713 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~ 791 (869)
|||+++|+|.+++.... .+++..+..++.||++||+|||+ .+ |+||||||+|||++.++.+||+|||+++.
T Consensus 227 ~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~g---iiHrDlkp~NIll~~~~~~kl~DFG~a~~ 298 (446)
T 4ejn_A 227 MEYANGGELFFHLSRER-----VFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKE 298 (446)
T ss_dssp ECCCSSCBHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCCCCGGGEEECSSSCEEECCCCCCCT
T ss_pred EeeCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHhhcCC---EEECCCCHHHEEECCCCCEEEccCCCcee
Confidence 99999999999886543 68999999999999999999998 76 99999999999999999999999999975
Q ss_pred ecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 792 YEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 792 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 299 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~ 351 (446)
T 4ejn_A 299 GIKDGA-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 351 (446)
T ss_dssp TCC------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ccCCCc-ccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCC
Confidence 433222 22346799999999999999999999999999999999999999964
No 81
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1e-34 Score=316.43 Aligned_cols=201 Identities=23% Similarity=0.399 Sum_probs=167.5
Q ss_pred hcCCCCCCeeeccCceEEEEEEE-cCCcEEEEEEecccCc---hhhHHHHHHHHHHHhcCCCceeeEEeEEeeCce----
Q 002899 637 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSR---QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQ---- 708 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~-~~g~~VAvK~~~~~~~---~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~---- 708 (869)
.++|++.+.||+|+||.||+|+. .+++.||||+++.... .....|.+|++++.+++||||+++++++...+.
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 46788999999999999999997 4789999999976532 234578899999999999999999999876543
Q ss_pred EEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCC
Q 002899 709 LLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGL 788 (869)
Q Consensus 709 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGl 788 (869)
.++||||+++++|.+++.... .+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~ 162 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG-----PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGI 162 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEETTSCEEECCCSC
T ss_pred cEEEEecCCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEcCCCCEEEeeccC
Confidence 499999999999999986542 6899999999999999999999998 99999999999999999999999999
Q ss_pred ceeecCCCcc--ccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 789 AKLYEEDKTH--ISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 789 a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
+......... ......||+.|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus 163 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~ 221 (311)
T 3ork_A 163 ARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221 (311)
T ss_dssp C------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 9876543221 22235689999999999999999999999999999999999999964
No 82
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1e-34 Score=325.43 Aligned_cols=202 Identities=27% Similarity=0.445 Sum_probs=175.2
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCc-hhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR-QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 714 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~-~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 714 (869)
.++|.+.+.||+|+||.||+|.+. +++.||||.++.... ....+|.+|++++++++||||+++++++..++..++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 467888999999999999999986 789999999876533 334578999999999999999999999999999999999
Q ss_pred eccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeecC
Q 002899 715 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEE 794 (869)
Q Consensus 715 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~~ 794 (869)
|+++|+|.+++.... ..+++..+..++.|+++||+|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 193 ~~~~g~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~ 265 (377)
T 3cbl_A 193 LVQGGDFLTFLRTEG----ARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEAD 265 (377)
T ss_dssp CCTTCBHHHHHHHHG----GGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECTT
T ss_pred cCCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---cCCcccCHHHEEEcCCCcEEECcCCCceecCC
Confidence 999999999986532 25899999999999999999999998 99999999999999999999999999986543
Q ss_pred CCcccc-ccccccccccchhhcccCCCCchhHHHHHHHHHHHHHc-CCCCCCC
Q 002899 795 DKTHIS-TRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNY 845 (869)
Q Consensus 795 ~~~~~~-~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~ 845 (869)
...... ....+++.|+|||++....++.++|||||||++|||++ |+.||..
T Consensus 266 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~ 318 (377)
T 3cbl_A 266 GVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPN 318 (377)
T ss_dssp SEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 221111 11235778999999998899999999999999999998 9999864
No 83
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=3.6e-34 Score=350.37 Aligned_cols=277 Identities=30% Similarity=0.496 Sum_probs=230.6
Q ss_pred eEEEEeccCCCccccCCccccC--CCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhhcCcccccccc
Q 002899 55 HVVTIALKAQNLTGTLPTELSK--LRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLS 131 (869)
Q Consensus 55 ~v~~L~l~~~~l~~~~p~~l~~--l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 131 (869)
+++.|++++|.+++.+|..+.. +++|++|+|++|.+++.+|..+..+ +|+.|+|++|++++.+|..+..+++|+.|+
T Consensus 369 ~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 448 (768)
T 3rgz_A 369 SLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLK 448 (768)
T ss_dssp TCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEE
T ss_pred CCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEE
Confidence 3555555555555555555555 6677777777777777777777776 788888888888888888888888888888
Q ss_pred ccccccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcCCC
Q 002899 132 IEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEG 211 (869)
Q Consensus 132 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 211 (869)
|++|.+++.+|..+..+++|++|+|++|++++.+|..+.++++|++|+|++|++++.+|..|+.+++|+.|+|++|++++
T Consensus 449 L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 528 (768)
T 3rgz_A 449 LWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSG 528 (768)
T ss_dssp CCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEE
T ss_pred CCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccC
Confidence 88888888888888888889999999998888888888888899999999999988888888889999999999999988
Q ss_pred CchHhhhcCCCCCEEEcCCCCCCCCccccc--------------------------------------------------
Q 002899 212 PIPASISALTSLTDLRISDLKGSESAFPKL-------------------------------------------------- 241 (869)
Q Consensus 212 ~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~-------------------------------------------------- 241 (869)
.+|..+..+++|+.|+|++|++....+..+
T Consensus 529 ~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 608 (768)
T 3rgz_A 529 NIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLS 608 (768)
T ss_dssp ECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGG
T ss_pred cCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccc
Confidence 888889999999999998887653221110
Q ss_pred ---------------------ccccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCCCchhhhcCCCCCEEEee
Q 002899 242 ---------------------DKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLT 300 (869)
Q Consensus 242 ---------------------~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 300 (869)
...+|+.|+|++|+++|.+|..++.+++|+.|+|++|+++|.+|..|+++++|+.|||+
T Consensus 609 ~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs 688 (768)
T 3rgz_A 609 TRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLS 688 (768)
T ss_dssp GTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECC
T ss_pred cccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECC
Confidence 01368899999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCCCCchhh--hccCCceeeeccCccCCCC
Q 002899 301 GNKLTGPVPKYI--FNSNKNVDISLNNFTWESS 331 (869)
Q Consensus 301 ~N~l~~~~p~~~--~~~l~~l~ls~N~~~~~~~ 331 (869)
+|+++|.+|..+ +..++.|||++|++++..+
T Consensus 689 ~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP 721 (768)
T 3rgz_A 689 SNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 721 (768)
T ss_dssp SSCCEECCCGGGGGCCCCSEEECCSSEEEEECC
T ss_pred CCcccCcCChHHhCCCCCCEEECcCCcccccCC
Confidence 999999999988 5578999999999987544
No 84
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=3.5e-34 Score=320.21 Aligned_cols=194 Identities=28% Similarity=0.424 Sum_probs=168.5
Q ss_pred CCeeeccCceEEEEEEEc-CCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEEEeccCCch
Q 002899 643 ANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYMKNNCL 721 (869)
Q Consensus 643 ~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~~~~gsL 721 (869)
.+.||+|+||.||+|... +|+.||+|+++.......+++.+|++++++++||||+++++++.+.+..++||||+++|+|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 567999999999999975 6899999999876666677899999999999999999999999999999999999999999
Q ss_pred hhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEE--cCCCcEEEeecCCceeecCCCccc
Q 002899 722 SRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLL--DKDLNAKISDFGLAKLYEEDKTHI 799 (869)
Q Consensus 722 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl--~~~~~~kl~DFGla~~~~~~~~~~ 799 (869)
.+++.... ..+++..+..++.||++||+|||+.+ |+||||||+|||+ +.++.+||+|||+++.......
T Consensus 174 ~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~-- 244 (373)
T 2x4f_A 174 FDRIIDES----YNLTELDTILFMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK-- 244 (373)
T ss_dssp HHHHHHTG----GGCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB--
T ss_pred HHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc--
Confidence 99886542 25899999999999999999999998 9999999999999 5678999999999987754332
Q ss_pred cccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 800 STRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 800 ~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
.....||+.|+|||++....++.++|||||||++|||++|+.||..
T Consensus 245 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~ 290 (373)
T 2x4f_A 245 LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLG 290 (373)
T ss_dssp CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCC
Confidence 2234699999999999988999999999999999999999999964
No 85
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=1.2e-34 Score=332.85 Aligned_cols=204 Identities=28% Similarity=0.476 Sum_probs=177.2
Q ss_pred HHHhcCCCCCCeeeccCceEEEEEEEcCCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEE
Q 002899 634 KAATNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 713 (869)
Q Consensus 634 ~~~t~~f~~~~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 713 (869)
+...++|++.+.||+|+||.||+|.+.++..||||+++... ...++|.+|++++++++|||||++++++. .+..++||
T Consensus 184 ~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~ 261 (454)
T 1qcf_A 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIIT 261 (454)
T ss_dssp BCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred eechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEE
Confidence 34456788899999999999999999888999999997643 34678999999999999999999999986 56789999
Q ss_pred EeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeec
Q 002899 714 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 793 (869)
Q Consensus 714 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~ 793 (869)
||+++|+|.+++.... ...+++..+..++.||++||+|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 262 e~~~~g~L~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~ 335 (454)
T 1qcf_A 262 EFMAKGSLLDFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIE 335 (454)
T ss_dssp CCCTTCBHHHHHHSHH---HHTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTCCEEECSTTGGGGBC
T ss_pred eecCCCcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEECCCCcEEEeeCCCceEcC
Confidence 9999999999997542 225789999999999999999999997 9999999999999999999999999998764
Q ss_pred CCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHc-CCCCCCC
Q 002899 794 EDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNY 845 (869)
Q Consensus 794 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~ 845 (869)
...........+++.|+|||++....++.++|||||||++|||++ |+.||..
T Consensus 336 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~ 388 (454)
T 1qcf_A 336 DNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPG 388 (454)
T ss_dssp CHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCC
Confidence 322222223446789999999998999999999999999999999 9999964
No 86
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=2e-34 Score=311.49 Aligned_cols=202 Identities=30% Similarity=0.495 Sum_probs=172.0
Q ss_pred hcCCCCCCeeeccCceEEEEEEE-----cCCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCceeeEEeEEeeC--ceE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGIL-----SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEG--NQL 709 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~-----~~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~--~~~ 709 (869)
.++|++.+.||+|+||.||+|++ .+++.||||++........+.|.+|++++++++||||+++++++... ...
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 35788899999999999999985 25789999999877666678899999999999999999999998654 458
Q ss_pred EEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCc
Q 002899 710 LLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLA 789 (869)
Q Consensus 710 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla 789 (869)
++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~~ 161 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLT 161 (295)
T ss_dssp EEEEECCTTCBHHHHHHHCG----GGCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCSC
T ss_pred EEEEEeCCCCCHHHHHHhcc----cccCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHhhEEEcCCCeEEEccCccc
Confidence 99999999999999997653 25899999999999999999999997 999999999999999999999999999
Q ss_pred eeecCCCc--cccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 790 KLYEEDKT--HISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 790 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
........ .......++..|+|||++.+..++.++||||||+++|||++|+.|+..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~ 219 (295)
T 3ugc_A 162 KVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 219 (295)
T ss_dssp C-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCS
T ss_pred ccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCC
Confidence 87654322 112234567789999999999999999999999999999999998753
No 87
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=4e-34 Score=317.01 Aligned_cols=198 Identities=29% Similarity=0.420 Sum_probs=160.7
Q ss_pred HhcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEEE
Q 002899 636 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 714 (869)
Q Consensus 636 ~t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 714 (869)
..++|++.+.||+|+||.||+|+.. +++.||||+++... ..+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 128 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence 4577899999999999999999986 57899999987543 34678899999999999999999999999999999999
Q ss_pred eccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcC---CCcEEEeecCCcee
Q 002899 715 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDK---DLNAKISDFGLAKL 791 (869)
Q Consensus 715 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~---~~~~kl~DFGla~~ 791 (869)
|+++|+|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+|||++. ++.+||+|||+++.
T Consensus 129 ~~~~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~ 200 (349)
T 2w4o_A 129 LVTGGELFDRIVEKG-----YYSERDAADAVKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKI 200 (349)
T ss_dssp CCCSCBHHHHHTTCS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESSSSTTCCEEECCCC----
T ss_pred eCCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCcccEEEecCCCCCCEEEccCccccc
Confidence 999999999986543 5899999999999999999999998 999999999999975 89999999999986
Q ss_pred ecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 792 YEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 792 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 201 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 252 (349)
T 2w4o_A 201 VEHQV--LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYD 252 (349)
T ss_dssp --------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred cCccc--ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCC
Confidence 64322 22345789999999999998999999999999999999999999964
No 88
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=8.6e-34 Score=303.52 Aligned_cols=199 Identities=24% Similarity=0.372 Sum_probs=176.8
Q ss_pred HhcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEEE
Q 002899 636 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 714 (869)
Q Consensus 636 ~t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 714 (869)
..++|++.+.||+|+||.||+|... ++..||+|++........+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME 86 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence 3467889999999999999999976 467899999987666667889999999999999999999999999999999999
Q ss_pred eccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEE---cCCCcEEEeecCCcee
Q 002899 715 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLL---DKDLNAKISDFGLAKL 791 (869)
Q Consensus 715 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl---~~~~~~kl~DFGla~~ 791 (869)
|+++++|.+++.... .+++..+..++.|++.||+|||+++ |+||||||+|||+ +.++.+||+|||++..
T Consensus 87 ~~~~~~L~~~~~~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~ 158 (277)
T 3f3z_A 87 LCTGGELFERVVHKR-----VFRESDAARIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR 158 (277)
T ss_dssp CCCSCBHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred ccCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEecCCCCCcEEEEeccccee
Confidence 999999999886542 5899999999999999999999998 9999999999999 7889999999999987
Q ss_pred ecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 792 YEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 792 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
...... .....||+.|+|||++.+. ++.++||||||+++|||++|+.||..
T Consensus 159 ~~~~~~--~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~ 209 (277)
T 3f3z_A 159 FKPGKM--MRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSA 209 (277)
T ss_dssp CCTTSC--BCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ccCccc--hhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCC
Confidence 654332 2345689999999988654 89999999999999999999999965
No 89
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.8e-34 Score=344.12 Aligned_cols=309 Identities=21% Similarity=0.292 Sum_probs=206.6
Q ss_pred EEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCc-hhhcCcccccccccc
Q 002899 56 VVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFP-KVLTNITTLKNLSIE 133 (869)
Q Consensus 56 v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls 133 (869)
++.|++++|.++ .+|..+.++++|++|+|++|.+++..+..+..+ +|++|+|++|.+.+.++ ..+..+++|++|+|+
T Consensus 280 L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~ 358 (606)
T 3t6q_A 280 LQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLS 358 (606)
T ss_dssp CSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECC
T ss_pred CCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECC
Confidence 444444444444 344444444445555555554444444444444 45555555555443332 235555555555565
Q ss_pred ccccCCCC--CccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCcc-ccCCCCcccEEEccCCcCC
Q 002899 134 GNLFTGSI--PPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPE-FIGKWKKIQKLHIQGSSLE 210 (869)
Q Consensus 134 ~N~l~~~~--~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~ 210 (869)
+|.+++.. +..+..+++|++|+|++|++.+..|..|..+++|++|+|++|++++..+. .|..+++|+.|+|++|.++
T Consensus 359 ~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~ 438 (606)
T 3t6q_A 359 HDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLD 438 (606)
T ss_dssp SSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCB
T ss_pred CCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccC
Confidence 55555443 44566666666666666666666666666777777777777777655443 3677777777777777777
Q ss_pred CCchHhhhcCCCCCEEEcCCCCCCCCcc---ccc-ccccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCCCch
Q 002899 211 GPIPASISALTSLTDLRISDLKGSESAF---PKL-DKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPT 286 (869)
Q Consensus 211 ~~~~~~l~~l~~L~~L~L~~n~~~~~~~---~~~-~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 286 (869)
+..|..+..+++|+.|+|++|++..... ..+ ...+|+.|+|++|++++..|..|..+++|+.|+|++|++++..|.
T Consensus 439 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 518 (606)
T 3t6q_A 439 ISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIE 518 (606)
T ss_dssp TTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGG
T ss_pred CcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChh
Confidence 7777777777888888888877765322 122 233788888888888888888888888888888888888888888
Q ss_pred hhhcCCCCCEEEeeCCcCCCCCchhh--hccCCceeeeccCccCCCCCCCCCCCCCccceeccCCCCCCCCCCcCccCCC
Q 002899 287 TFEKLAKTNFMYLTGNKLTGPVPKYI--FNSNKNVDISLNNFTWESSDPIECPRGSVNLVESYSSPRNKLDKVHPCLRQN 364 (869)
Q Consensus 287 ~~~~l~~L~~L~Ls~N~l~~~~p~~~--~~~l~~l~ls~N~~~~~~~~p~~C~c~~~~~~~~l~~~~~~~~~~~~~~~~~ 364 (869)
.+..+++| .|+|++|++++..|..+ +..++.+++++| ||.|+|...|++.|++.....+.. ...
T Consensus 519 ~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N--------~~~c~c~~~~~~~w~~~~~~~~~~-----~~~ 584 (606)
T 3t6q_A 519 ALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQN--------PLDCTCSNIYFLEWYKENMQKLED-----TED 584 (606)
T ss_dssp GGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTC--------CEECSGGGHHHHHHHHHCGGGEEC-----GGG
T ss_pred HhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCC--------CccccCCcHHHHHHHHhCcccccC-----CCC
Confidence 88888888 88888888887777665 567888888888 999999999999999765433321 245
Q ss_pred CCCCCCcccccceee
Q 002899 365 FPCSAPADQYHYTLH 379 (869)
Q Consensus 365 ~~C~~p~~~~~~~~~ 379 (869)
..|+.|+..+|+.+.
T Consensus 585 ~~C~~p~~~~g~~l~ 599 (606)
T 3t6q_A 585 TLCENPPLLRGVRLS 599 (606)
T ss_dssp CBEEESGGGTTCBGG
T ss_pred CeeCCchHhCCCeee
Confidence 689999888776544
No 90
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=3.1e-34 Score=332.77 Aligned_cols=204 Identities=26% Similarity=0.452 Sum_probs=178.6
Q ss_pred HhcCCCCCCeeeccCceEEEEEEEcC-CcEEEEEEecccCchhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEEE
Q 002899 636 ATNNFDPANKVGEGGFGSVYKGILSD-GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 714 (869)
Q Consensus 636 ~t~~f~~~~~IG~G~fG~Vyka~~~~-g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 714 (869)
..++|++.+.||+|+||.||+|.+.. +..||||+++... ...++|.+|++++++++|||||++++++...+..++|||
T Consensus 218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 296 (495)
T 1opk_A 218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 296 (495)
T ss_dssp CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEE
Confidence 34568888999999999999999874 7899999997643 346789999999999999999999999999999999999
Q ss_pred eccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeecC
Q 002899 715 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEE 794 (869)
Q Consensus 715 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~~ 794 (869)
|+++|+|.+++..... ..+++..+..++.||++||+|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 297 ~~~~g~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 370 (495)
T 1opk_A 297 FMTYGNLLDYLRECNR---QEVSAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTG 370 (495)
T ss_dssp CCTTCBHHHHHHHSCT---TTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCEEECCTTCEECCTT
T ss_pred ccCCCCHHHHHHhcCc---CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChhhEEECCCCcEEEeecccceeccC
Confidence 9999999999975432 25899999999999999999999998 99999999999999999999999999987654
Q ss_pred CCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHc-CCCCCCCC
Q 002899 795 DKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNYR 846 (869)
Q Consensus 795 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~ 846 (869)
..........+++.|+|||++....++.++|||||||++|||++ |+.||...
T Consensus 371 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~ 423 (495)
T 1opk_A 371 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 423 (495)
T ss_dssp CCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred CceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCC
Confidence 33322233456789999999998899999999999999999999 99998653
No 91
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=2e-34 Score=320.60 Aligned_cols=217 Identities=27% Similarity=0.406 Sum_probs=182.3
Q ss_pred cccHHHHHHHhcCCCCCCeeeccCceEEEEEEEc------CCcEEEEEEecccCc-hhhHHHHHHHHHHHhc-CCCceee
Q 002899 627 LYTLRQIKAATNNFDPANKVGEGGFGSVYKGILS------DGTVIAVKQLSSKSR-QGNREFVNEIGMISAQ-QHPNLVK 698 (869)
Q Consensus 627 ~~~~~~i~~~t~~f~~~~~IG~G~fG~Vyka~~~------~g~~VAvK~~~~~~~-~~~~~f~~E~~~l~~l-~H~nIv~ 698 (869)
.+...+++...++|.+.+.||+|+||.||+|.+. +++.||||+++.... ...+.+.+|++++.++ +||||++
T Consensus 11 ~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~ 90 (359)
T 3vhe_A 11 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 90 (359)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceee
Confidence 3455666677889999999999999999999842 457899999976533 3456799999999999 8999999
Q ss_pred EEeEEeeCce-EEEEEEeccCCchhhhhhcCCccc---------------------------------------------
Q 002899 699 LYGCCVEGNQ-LLLVYEYMKNNCLSRAIFGKDTEY--------------------------------------------- 732 (869)
Q Consensus 699 l~~~~~~~~~-~~lV~E~~~~gsL~~~l~~~~~~~--------------------------------------------- 732 (869)
+++++.+.+. .++||||+++|+|.+++.......
T Consensus 91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (359)
T 3vhe_A 91 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE 170 (359)
T ss_dssp EEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------
T ss_pred eeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccc
Confidence 9999987654 899999999999999997654210
Q ss_pred ----------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeecCCC
Q 002899 733 ----------------RLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEEDK 796 (869)
Q Consensus 733 ----------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~ 796 (869)
...+++..+..++.|+++||+|||+++ |+||||||+|||++.++.+||+|||++.......
T Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 247 (359)
T 3vhe_A 171 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 247 (359)
T ss_dssp -------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCT
T ss_pred cccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCcEEEEeccceeeecccc
Confidence 112899999999999999999999998 9999999999999999999999999998664332
Q ss_pred c-cccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHc-CCCCCCCC
Q 002899 797 T-HISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNYR 846 (869)
Q Consensus 797 ~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~ 846 (869)
. .......||+.|+|||++.+..++.++||||||+++|||++ |+.||...
T Consensus 248 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 299 (359)
T 3vhe_A 248 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 299 (359)
T ss_dssp TCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred cchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCcc
Confidence 2 22334568899999999999999999999999999999998 99999653
No 92
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.2e-33 Score=318.02 Aligned_cols=204 Identities=18% Similarity=0.276 Sum_probs=176.4
Q ss_pred hcCCCCCCeeecc--CceEEEEEEEc-CCcEEEEEEecccC--chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEE
Q 002899 637 TNNFDPANKVGEG--GFGSVYKGILS-DGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLL 711 (869)
Q Consensus 637 t~~f~~~~~IG~G--~fG~Vyka~~~-~g~~VAvK~~~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 711 (869)
.++|++.++||+| +||.||+|+.. +++.||||++.... ....+.+.+|+++++.++|||||++++++.+++..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 4578899999999 99999999986 68999999987543 3335678889999999999999999999999999999
Q ss_pred EEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCcee
Q 002899 712 VYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKL 791 (869)
Q Consensus 712 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~ 791 (869)
||||+++|+|.+++..... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||.+..
T Consensus 104 v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~kl~dfg~~~~ 177 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFM---DGMNELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLS 177 (389)
T ss_dssp EEECCTTCBHHHHHHHTCT---TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred EEEccCCCCHHHHHhhhcc---cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEccccccee
Confidence 9999999999999876422 25899999999999999999999998 99999999999999999999999999875
Q ss_pred ecCCCc------cccccccccccccchhhccc--CCCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 002899 792 YEEDKT------HISTRIAGTIGYMAPEYAMR--GYLTSKADVYSFGVVTLEIVSGKSNTNYR 846 (869)
Q Consensus 792 ~~~~~~------~~~~~~~gt~~y~aPE~~~~--~~~~~k~DvwSlGvil~elltG~~p~~~~ 846 (869)
...... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 178 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 240 (389)
T 3gni_B 178 MISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDM 240 (389)
T ss_dssp CEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred eccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCC
Confidence 532211 11122468999999999987 57899999999999999999999999653
No 93
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=6.9e-34 Score=319.97 Aligned_cols=202 Identities=28% Similarity=0.470 Sum_probs=164.0
Q ss_pred HHhcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEeccc--CchhhHHHHHHHHHHHhcC-CCceeeEEeEEeeCc--e
Q 002899 635 AATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSK--SRQGNREFVNEIGMISAQQ-HPNLVKLYGCCVEGN--Q 708 (869)
Q Consensus 635 ~~t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~--~~~~~~~f~~E~~~l~~l~-H~nIv~l~~~~~~~~--~ 708 (869)
...++|++.+.||+|+||.||+|... +++.||||++... .....+++.+|+.++..+. ||||+++++++...+ .
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 34678999999999999999999975 6899999998643 3344567889999999997 999999999997644 6
Q ss_pred EEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCC
Q 002899 709 LLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGL 788 (869)
Q Consensus 709 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGl 788 (869)
.|+||||++ |+|.+.+... .+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 86 ~~lv~e~~~-~~L~~~~~~~------~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~ 155 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRAN------ILEPVHKQYVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGL 155 (388)
T ss_dssp EEEEEECCS-EEHHHHHHHT------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEecccC-cCHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHeEEcCCCCEEecCCcc
Confidence 899999998 5888888653 5899999999999999999999998 99999999999999999999999999
Q ss_pred ceeecCCC--------------------ccccccccccccccchhhccc-CCCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 002899 789 AKLYEEDK--------------------THISTRIAGTIGYMAPEYAMR-GYLTSKADVYSFGVVTLEIVSGKSNTNYR 846 (869)
Q Consensus 789 a~~~~~~~--------------------~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~ 846 (869)
++...... .......+||+.|+|||++.+ ..++.++||||+||++|||++|++||...
T Consensus 156 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 234 (388)
T 3oz6_A 156 SRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGS 234 (388)
T ss_dssp CEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCC
Confidence 98753211 111233579999999999876 67899999999999999999999999654
No 94
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.8e-34 Score=318.02 Aligned_cols=202 Identities=27% Similarity=0.385 Sum_probs=174.2
Q ss_pred hcCCCCCCeeeccCceEEEEEEE----cCCcEEEEEEecccC----chhhHHHHHHHHHHHhc-CCCceeeEEeEEeeCc
Q 002899 637 TNNFDPANKVGEGGFGSVYKGIL----SDGTVIAVKQLSSKS----RQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGN 707 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~----~~g~~VAvK~~~~~~----~~~~~~f~~E~~~l~~l-~H~nIv~l~~~~~~~~ 707 (869)
.++|++.+.||+|+||.||+|+. .+++.||||+++... ......+.+|++++..+ +||||+++++++...+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 35788999999999999999997 368999999986542 22345677899999999 6999999999999999
Q ss_pred eEEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecC
Q 002899 708 QLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFG 787 (869)
Q Consensus 708 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFG 787 (869)
..++||||+++|+|.+++.... .+++..+..++.||++||+|||+.+ |+||||||+|||++.++.+||+|||
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DfG 204 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRE-----RFTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFG 204 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEESCSS
T ss_pred eEEEEeecCCCCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCcEEEeeCC
Confidence 9999999999999999986542 5899999999999999999999998 9999999999999999999999999
Q ss_pred CceeecCCCccccccccccccccchhhccc--CCCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 002899 788 LAKLYEEDKTHISTRIAGTIGYMAPEYAMR--GYLTSKADVYSFGVVTLEIVSGKSNTNYR 846 (869)
Q Consensus 788 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~k~DvwSlGvil~elltG~~p~~~~ 846 (869)
+++..............||+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 205 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~ 265 (355)
T 1vzo_A 205 LSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVD 265 (355)
T ss_dssp EEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCT
T ss_pred CCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccC
Confidence 998765443333445679999999999985 35789999999999999999999999753
No 95
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=8.8e-34 Score=311.11 Aligned_cols=191 Identities=27% Similarity=0.380 Sum_probs=151.7
Q ss_pred CCeeeccCceEEEEEEEc-CCcEEEEEEecccCchhhHHHHHHHHHHHhcC-CCceeeEEeEEeeCceEEEEEEeccCCc
Q 002899 643 ANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQ-HPNLVKLYGCCVEGNQLLLVYEYMKNNC 720 (869)
Q Consensus 643 ~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lV~E~~~~gs 720 (869)
.+.||+|+||.||+|... +++.||||++... ....+.+|++++..+. ||||+++++++.+++..++||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 378999999999999975 6899999998643 3467788999999997 9999999999999999999999999999
Q ss_pred hhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCC---cEEEeecCCceeecCCCc
Q 002899 721 LSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDL---NAKISDFGLAKLYEEDKT 797 (869)
Q Consensus 721 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~---~~kl~DFGla~~~~~~~~ 797 (869)
|.+++.... .+++..+..++.|+++||+|||+++ |+||||||+|||++.++ .+||+|||+++.......
T Consensus 93 L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~ 164 (325)
T 3kn6_A 93 LFERIKKKK-----HFSETEASYIMRKLVSAVSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ 164 (325)
T ss_dssp HHHHHHHCS-----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEC----CEEEECCCTTCEECCC---
T ss_pred HHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC
Confidence 999997643 6899999999999999999999998 99999999999998765 899999999987654332
Q ss_pred cccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 798 HISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 798 ~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
. .....||+.|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus 165 ~-~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~ 211 (325)
T 3kn6_A 165 P-LKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQS 211 (325)
T ss_dssp --------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-
T ss_pred c-ccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCC
Confidence 2 2335689999999999999999999999999999999999999965
No 96
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=6.4e-34 Score=316.81 Aligned_cols=209 Identities=26% Similarity=0.344 Sum_probs=180.8
Q ss_pred CcccHHHHHHHhcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCchhhHHHHHHHHHHHhcC-----CCceeeE
Q 002899 626 GLYTLRQIKAATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQ-----HPNLVKL 699 (869)
Q Consensus 626 ~~~~~~~i~~~t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~-----H~nIv~l 699 (869)
..++.++.....++|.+.++||+|+||.||+|+.. +++.||||+++.. ....+.+..|++++..++ ||||+++
T Consensus 23 ~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~ 101 (360)
T 3llt_A 23 VHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKY 101 (360)
T ss_dssp GSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCE
T ss_pred eeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecc
Confidence 34455555566789999999999999999999974 6889999998643 334567788999999886 9999999
Q ss_pred EeEEeeCceEEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcC--
Q 002899 700 YGCCVEGNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDK-- 777 (869)
Q Consensus 700 ~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~-- 777 (869)
++++...+..++||||+ +++|.+++..... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.
T Consensus 102 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~ 174 (360)
T 3llt_A 102 HGKFMYYDHMCLIFEPL-GPSLYEIITRNNY---NGFHIEDIKLYCIEILKALNYLRKMS---LTHTDLKPENILLDDPY 174 (360)
T ss_dssp EEEEEETTEEEEEECCC-CCBHHHHHHHTTT---CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCTT
T ss_pred cceeeECCeeEEEEcCC-CCCHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCcccEEEcccc
Confidence 99999999999999999 8999999876532 25899999999999999999999998 999999999999975
Q ss_pred -----------------------CCcEEEeecCCceeecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHH
Q 002899 778 -----------------------DLNAKISDFGLAKLYEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTL 834 (869)
Q Consensus 778 -----------------------~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~ 834 (869)
++.+||+|||++....... ....||+.|+|||++.+..++.++|||||||++|
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ 250 (360)
T 3llt_A 175 FEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH----GSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLA 250 (360)
T ss_dssp CCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC----CSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHH
T ss_pred ccccccchhcccccccccccccCCCCEEEEeccCceecCCCC----cCccCcccccCcHHHcCCCCCCccchHHHHHHHH
Confidence 7899999999998654322 2457899999999999999999999999999999
Q ss_pred HHHcCCCCCCCC
Q 002899 835 EIVSGKSNTNYR 846 (869)
Q Consensus 835 elltG~~p~~~~ 846 (869)
||++|+.||...
T Consensus 251 ell~g~~pf~~~ 262 (360)
T 3llt_A 251 ELYTGSLLFRTH 262 (360)
T ss_dssp HHHHSSCSCCCS
T ss_pred HHHHCCCCCCCC
Confidence 999999999653
No 97
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=9.2e-34 Score=309.00 Aligned_cols=197 Identities=28% Similarity=0.355 Sum_probs=165.1
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCc--hhhHHHHHHHHHHHhc-CCCceeeEEeEEeeCceEEEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR--QGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQLLLV 712 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~--~~~~~f~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV 712 (869)
.++|++.++||+|+||+||+|+.. +++.||||++..... ....++..|+..+.++ +||||+++++++.+++..++|
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv 135 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ 135 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence 467999999999999999999986 789999999865432 2334555666555554 999999999999999999999
Q ss_pred EEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceee
Q 002899 713 YEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 792 (869)
Q Consensus 713 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~ 792 (869)
|||+ +++|.+++.... ..++|..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++...
T Consensus 136 ~e~~-~~~L~~~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~DFG~a~~~ 207 (311)
T 3p1a_A 136 TELC-GPSLQQHCEAWG----ASLPEAQVWGYLRDTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVEL 207 (311)
T ss_dssp EECC-CCBHHHHHHHHC----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECGGGCEEECCCTTCEEC
T ss_pred Eecc-CCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEccceeeeec
Confidence 9999 668888876543 26899999999999999999999997 999999999999999999999999999876
Q ss_pred cCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCC
Q 002899 793 EEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTN 844 (869)
Q Consensus 793 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~ 844 (869)
.... ......||+.|+|||++.+ .++.++|||||||++|||++|+.|+.
T Consensus 208 ~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~ 256 (311)
T 3p1a_A 208 GTAG--AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPH 256 (311)
T ss_dssp C--------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCS
T ss_pred ccCC--CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 5432 2234568999999998875 78999999999999999999977663
No 98
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.7e-33 Score=306.49 Aligned_cols=201 Identities=26% Similarity=0.394 Sum_probs=170.4
Q ss_pred cCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCc--hhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEEE
Q 002899 638 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR--QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 714 (869)
Q Consensus 638 ~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~--~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 714 (869)
++|++.+.||+|+||.||+|... +++.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 57889999999999999999986 589999998865433 234668899999999999999999999999999999999
Q ss_pred eccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeecC
Q 002899 715 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEE 794 (869)
Q Consensus 715 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~~ 794 (869)
|+++++|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 83 ~~~~~~l~~~~~~~~-----~~~~~~~~~i~~~l~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 154 (311)
T 4agu_A 83 YCDHTVLHELDRYQR-----GVPEHLVKSITWQTLQAVNFCHKHN---CIHRDVKPENILITKHSVIKLCDFGFARLLTG 154 (311)
T ss_dssp CCSEEHHHHHHHTSS-----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECC-
T ss_pred eCCCchHHHHHhhhc-----CCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCChhhEEEcCCCCEEEeeCCCchhccC
Confidence 999999988876543 5899999999999999999999998 99999999999999999999999999987654
Q ss_pred CCccccccccccccccchhhccc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCC
Q 002899 795 DKTHISTRIAGTIGYMAPEYAMR-GYLTSKADVYSFGVVTLEIVSGKSNTNYRP 847 (869)
Q Consensus 795 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~ 847 (869)
.... .....||+.|+|||++.+ ..++.++||||||+++|||++|+.||....
T Consensus 155 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 207 (311)
T 4agu_A 155 PSDY-YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKS 207 (311)
T ss_dssp ------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cccc-cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC
Confidence 3222 233568999999999876 578999999999999999999999996543
No 99
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=4.7e-34 Score=315.40 Aligned_cols=208 Identities=31% Similarity=0.479 Sum_probs=177.3
Q ss_pred HHhcCCCCCCeeeccCceEEEEEEEc------CCcEEEEEEecccCc-hhhHHHHHHHHHHHhcCCCceeeEEeEEeeCc
Q 002899 635 AATNNFDPANKVGEGGFGSVYKGILS------DGTVIAVKQLSSKSR-QGNREFVNEIGMISAQQHPNLVKLYGCCVEGN 707 (869)
Q Consensus 635 ~~t~~f~~~~~IG~G~fG~Vyka~~~------~g~~VAvK~~~~~~~-~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~ 707 (869)
...++|++.+.||+|+||.||+|+.. +++.||||+++.... ...+.|.+|++++++++||||+++++++.+.+
T Consensus 44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 123 (343)
T 1luf_A 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGK 123 (343)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC
Confidence 34678999999999999999999975 347899999976533 33567999999999999999999999999999
Q ss_pred eEEEEEEeccCCchhhhhhcCCcc-------------------cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCC
Q 002899 708 QLLLVYEYMKNNCLSRAIFGKDTE-------------------YRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDI 768 (869)
Q Consensus 708 ~~~lV~E~~~~gsL~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dl 768 (869)
..++||||+++|+|.+++...... ....+++..++.++.||++||+|||+++ |+||||
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dl 200 (343)
T 1luf_A 124 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVHRDL 200 (343)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCC
T ss_pred ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCC
Confidence 999999999999999998764211 1146899999999999999999999998 999999
Q ss_pred CCCCEEEcCCCcEEEeecCCceeecCCCc-cccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHc-CCCCCCC
Q 002899 769 KTSNVLLDKDLNAKISDFGLAKLYEEDKT-HISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNY 845 (869)
Q Consensus 769 k~~NILl~~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~ 845 (869)
||+|||++.++.+||+|||++........ .......+|+.|+|||++....++.++||||||+++|||++ |+.||..
T Consensus 201 kp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 279 (343)
T 1luf_A 201 ATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG 279 (343)
T ss_dssp SGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred CcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCC
Confidence 99999999999999999999976543221 12223567889999999998899999999999999999999 9999864
No 100
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=6.9e-34 Score=305.14 Aligned_cols=202 Identities=28% Similarity=0.402 Sum_probs=162.3
Q ss_pred hcCCCCCCeeeccCceEEEEEEEcC----CcEEEEEEecccC-chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILSD----GTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLL 711 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~~----g~~VAvK~~~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 711 (869)
.++|++.+.||+|+||.||+|.... +..||+|+++... ....+.|.+|+.++++++||||+++++++. ++..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence 4578889999999999999999743 4579999987643 334567899999999999999999999984 567899
Q ss_pred EEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCcee
Q 002899 712 VYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKL 791 (869)
Q Consensus 712 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~ 791 (869)
||||+++|+|.+++.... ..+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 93 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 165 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVRK----YSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRY 165 (281)
T ss_dssp EEECCTTEEHHHHHHHTT----TTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECC------
T ss_pred EEecCCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHEEECCCCCEEECccccccc
Confidence 999999999999996543 25899999999999999999999998 99999999999999999999999999987
Q ss_pred ecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHc-CCCCCCCC
Q 002899 792 YEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNYR 846 (869)
Q Consensus 792 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~ 846 (869)
.............+++.|+|||++....++.++||||||+++|||++ |+.||...
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~ 221 (281)
T 1mp8_A 166 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 221 (281)
T ss_dssp -------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred cCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcC
Confidence 75443322333456789999999998899999999999999999997 99999653
No 101
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=100.00 E-value=6.3e-34 Score=326.97 Aligned_cols=305 Identities=15% Similarity=0.176 Sum_probs=213.1
Q ss_pred cceEecCCCCcceEEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhh
Q 002899 43 SNVTCDCSSATCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVL 121 (869)
Q Consensus 43 ~~v~C~~~~~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~ 121 (869)
|+-.|.|... ...+++.+.+++ .+|..+. ++|+.|+|++|+|+++.+..|..+ +|++|+|++|+++++.+..|
T Consensus 46 Cp~~C~C~~~---~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~ 119 (452)
T 3zyi_A 46 CPSVCSCSNQ---FSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAF 119 (452)
T ss_dssp CCTTSEECSS---SCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTT
T ss_pred CCCCCEECCC---CcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhc
Confidence 4445666432 345778888888 5676654 688888888888887777777766 67777777777777777777
Q ss_pred cCccccccccccccccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccC-CcCCCCCccccCCCCccc
Q 002899 122 TNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISD-NNFSGKIPEFIGKWKKIQ 200 (869)
Q Consensus 122 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~ 200 (869)
.++++|++|+|++|+|+...+..|..+++|++|+|++|+|+...+..|.++++|+.|+|++ |.+....+..|.++++|+
T Consensus 120 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~ 199 (452)
T 3zyi_A 120 NGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLK 199 (452)
T ss_dssp TTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCC
T ss_pred cCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCC
Confidence 7777777777777777766556677777777777777777765556677777777777776 444444444566677777
Q ss_pred EEEccCCcCCCCchHhhhcCCCCCEEEcCCCCCCCCcccccccccceEEEcccccCccCCCcccCCCCCcCEEeccCCCC
Q 002899 201 KLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNL 280 (869)
Q Consensus 201 ~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l 280 (869)
.|+|++|++++. | .+..++ +|+.|+|++|+|++..|..|..+++|+.|+|++|+|
T Consensus 200 ~L~L~~n~l~~~-~-~~~~l~-----------------------~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l 254 (452)
T 3zyi_A 200 YLNLGMCNIKDM-P-NLTPLV-----------------------GLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQV 254 (452)
T ss_dssp EEECTTSCCSSC-C-CCTTCT-----------------------TCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCC
T ss_pred EEECCCCccccc-c-cccccc-----------------------cccEEECcCCcCcccCcccccCccCCCEEEeCCCcC
Confidence 777777766643 2 234444 455556667777777777788888888888888888
Q ss_pred CCCCchhhhcCCCCCEEEeeCCcCCCCCchhh--hccCCceeeeccCccCCCCCCCCCCCCCccceeccCCCCCCCCCCc
Q 002899 281 TGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYI--FNSNKNVDISLNNFTWESSDPIECPRGSVNLVESYSSPRNKLDKVH 358 (869)
Q Consensus 281 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~--~~~l~~l~ls~N~~~~~~~~p~~C~c~~~~~~~~l~~~~~~~~~~~ 358 (869)
++..|..|..+++|+.|+|++|+|++..+..+ +..++.|+|++| ||.|||++.|+..|++......
T Consensus 255 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N--------p~~CdC~~~~l~~~l~~~~~~~---- 322 (452)
T 3zyi_A 255 SLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHN--------PWNCDCDILWLAWWLREYIPTN---- 322 (452)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSS--------CEECSTTTHHHHHHHHHHC-------
T ss_pred ceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCC--------CcCCCCCchHHHHHHHHhCccC----
Confidence 87777778888888888888888875555444 456777888888 9999999999999987532111
Q ss_pred CccCCCCCCCCCcccccceee------eecCCcceecCCc
Q 002899 359 PCLRQNFPCSAPADQYHYTLH------INCGGAKINTGHT 392 (869)
Q Consensus 359 ~~~~~~~~C~~p~~~~~~~~~------~~c~~~~~~~~~~ 392 (869)
......|+.|...+++.+. ..|..|.+.....
T Consensus 323 --~~~~~~C~~P~~l~g~~l~~~~~~~~~C~~P~i~~~~~ 360 (452)
T 3zyi_A 323 --STCCGRCHAPMHMRGRYLVEVDQASFQCSAPFIMDAPR 360 (452)
T ss_dssp --CCSSCBEEESTTTTTCBTTSCCGGGCCCCCCCCSBCCC
T ss_pred --CccCcEeCCchHhccchhhccchhhhcccCcccccccc
Confidence 1123579899888876543 4688777654433
No 102
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=7.5e-34 Score=313.67 Aligned_cols=209 Identities=25% Similarity=0.409 Sum_probs=175.7
Q ss_pred HhcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCchhhHHHHHHHHHHHhc-CCCceeeEEeEEeeCceEEEEE
Q 002899 636 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQLLLVY 713 (869)
Q Consensus 636 ~t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~ 713 (869)
..++|++.+.||+|+||.||+|... +++.||||+++.... .+.+|++++.++ +||||+++++++.+++..++||
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 95 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT 95 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence 4567999999999999999999976 688999999965432 345688888877 7999999999999999999999
Q ss_pred EeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCC----CcEEEeecCCc
Q 002899 714 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKD----LNAKISDFGLA 789 (869)
Q Consensus 714 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~----~~~kl~DFGla 789 (869)
||+++|+|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||+..+ +.+||+|||++
T Consensus 96 E~~~gg~L~~~i~~~~-----~~~~~~~~~~~~qi~~al~~lH~~g---ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a 167 (342)
T 2qr7_A 96 ELMKGGELLDKILRQK-----FFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFA 167 (342)
T ss_dssp CCCCSCBHHHHHHTCT-----TCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSCSGGGEEECCCTTC
T ss_pred eCCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---cEeccCCHHHEEEecCCCCcCeEEEEECCCc
Confidence 9999999999986643 5899999999999999999999998 9999999999998543 35999999999
Q ss_pred eeecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcchhhHHHH
Q 002899 790 KLYEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNYRPNEDFVYLLDW 857 (869)
Q Consensus 790 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~l~~w 857 (869)
........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....+....+.+.
T Consensus 168 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~ 234 (342)
T 2qr7_A 168 KQLRAENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILAR 234 (342)
T ss_dssp EECBCTTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHH
T ss_pred ccCcCCCC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHH
Confidence 87654332 22345789999999999888889999999999999999999999975443344444333
No 103
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=5.3e-34 Score=303.18 Aligned_cols=201 Identities=30% Similarity=0.534 Sum_probs=176.8
Q ss_pred hcCCCCCCeeeccCceEEEEEEEcCCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEEEec
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYM 716 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~~ 716 (869)
.++|++.+.||+|+||.||+|...+++.||+|++..... ..+++.+|++++++++||||+++++++.+++..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM 85 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence 356788899999999999999998889999999976543 3467899999999999999999999999999999999999
Q ss_pred cCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeecCCC
Q 002899 717 KNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEEDK 796 (869)
Q Consensus 717 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~ 796 (869)
++++|.+++.... ..+++..+..++.|+++||+|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 86 ~~~~L~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 158 (267)
T 3t9t_A 86 EHGCLSDYLRTQR----GLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ 158 (267)
T ss_dssp TTCBHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH
T ss_pred CCCcHHHHHhhCc----ccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEECCCCCEEEccccccccccccc
Confidence 9999999996543 25899999999999999999999998 9999999999999999999999999998664322
Q ss_pred ccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHc-CCCCCCC
Q 002899 797 THISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNY 845 (869)
Q Consensus 797 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~ 845 (869)
........+++.|+|||++....++.++||||||+++|||++ |+.||..
T Consensus 159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~ 208 (267)
T 3t9t_A 159 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 208 (267)
T ss_dssp HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred ccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCC
Confidence 222233457789999999998899999999999999999999 8999864
No 104
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=3.3e-33 Score=302.09 Aligned_cols=201 Identities=21% Similarity=0.304 Sum_probs=175.7
Q ss_pred hcCCCCCCeeeccCceEEEEEEE-cCCcEEEEEEecccCchhhHHHHHHHHHHHhc-CCCceeeEEeEEeeCceEEEEEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQLLLVYE 714 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~-~~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~E 714 (869)
.++|++.+.||+|+||.||+|.. .+++.||||++.... ....+.+|++++..+ +|+|++++++++.+....++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 45788999999999999999996 478999999986432 345688999999998 89999999999999999999999
Q ss_pred eccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCc-----EEEeecCCc
Q 002899 715 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLN-----AKISDFGLA 789 (869)
Q Consensus 715 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~-----~kl~DFGla 789 (869)
|+ +++|.+++.... ..+++..+..++.|+++||+|||+++ |+||||||+|||++.++. +||+|||++
T Consensus 87 ~~-~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~ 158 (298)
T 1csn_A 87 LL-GPSLEDLLDLCG----RKFSVKTVAMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMV 158 (298)
T ss_dssp CC-CCBHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECCSSSTTTTCEEECCCTTC
T ss_pred ec-CCCHHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEeccCCCCCCCeEEEEECccc
Confidence 99 999999997543 25899999999999999999999987 999999999999988776 999999999
Q ss_pred eeecCCCcc------ccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCCCC
Q 002899 790 KLYEEDKTH------ISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNYRP 847 (869)
Q Consensus 790 ~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~ 847 (869)
......... ......||+.|+|||++.+..++.++||||||+++|||++|+.||....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 222 (298)
T 1csn_A 159 KFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK 222 (298)
T ss_dssp EESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCC
T ss_pred cccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhh
Confidence 877543321 1234579999999999999899999999999999999999999997644
No 105
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1e-33 Score=308.63 Aligned_cols=207 Identities=30% Similarity=0.470 Sum_probs=177.2
Q ss_pred hcCCCCCCeeeccCceEEEEEEE------cCCcEEEEEEecccC-chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGIL------SDGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQL 709 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~------~~g~~VAvK~~~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 709 (869)
.++|.+.+.||+|+||.||+|.. .+++.||||+++... ....+.+.+|++++++++||||+++++++.+.+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 56788899999999999999986 235789999997653 34457789999999999999999999999999999
Q ss_pred EEEEEeccCCchhhhhhcCCcc-------------------cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCC
Q 002899 710 LLVYEYMKNNCLSRAIFGKDTE-------------------YRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKT 770 (869)
Q Consensus 710 ~lV~E~~~~gsL~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~ 770 (869)
++||||+++|+|.+++...... ....+++..+..++.||++||+|||+++ |+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK---LVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT---EECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC---Ccccccch
Confidence 9999999999999999764321 1124899999999999999999999998 99999999
Q ss_pred CCEEEcCCCcEEEeecCCceeecCCCccc-cccccccccccchhhcccCCCCchhHHHHHHHHHHHHHc-CCCCCCCC
Q 002899 771 SNVLLDKDLNAKISDFGLAKLYEEDKTHI-STRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNYR 846 (869)
Q Consensus 771 ~NILl~~~~~~kl~DFGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~ 846 (869)
+|||++.++.+||+|||++.......... .....+|+.|+|||++.+..++.++||||||+++|||++ |+.||...
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 256 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 256 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999998765433221 223456789999999998889999999999999999999 99999654
No 106
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.7e-33 Score=322.92 Aligned_cols=198 Identities=30% Similarity=0.480 Sum_probs=172.1
Q ss_pred hcCCCCCCeeeccCceEEEEEEEcCCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCceeeEEeEEeeCc-eEEEEEEe
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGN-QLLLVYEY 715 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~-~~~lV~E~ 715 (869)
.++|++.+.||+|+||.||+|.+. ++.||||+++... ..+.|.+|++++++++|||||++++++.+.+ ..++||||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~ 268 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 268 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence 457888899999999999999985 7899999997643 4678999999999999999999999987765 78999999
Q ss_pred ccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeecCC
Q 002899 716 MKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEED 795 (869)
Q Consensus 716 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~ 795 (869)
+++|+|.+++..... ..+++..+..++.||++||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 269 ~~~g~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 342 (450)
T 1k9a_A 269 MAKGSLVDYLRSRGR---SVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 342 (450)
T ss_dssp CTTCBHHHHHHHHCT---TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTSCEEECCCTTCEECC--
T ss_pred cCCCcHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEECCCCCEEEeeCCCccccccc
Confidence 999999999975432 24799999999999999999999998 999999999999999999999999999855322
Q ss_pred CccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCC
Q 002899 796 KTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNYRP 847 (869)
Q Consensus 796 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~ 847 (869)
. ....+++.|+|||++....++.++|||||||++|||++ |+.||....
T Consensus 343 ~----~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~ 391 (450)
T 1k9a_A 343 Q----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP 391 (450)
T ss_dssp --------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSC
T ss_pred c----cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 1 12356889999999999999999999999999999998 999996543
No 107
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1e-33 Score=317.89 Aligned_cols=206 Identities=29% Similarity=0.431 Sum_probs=177.0
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc--------CCcEEEEEEecccCc-hhhHHHHHHHHHHHhc-CCCceeeEEeEEeeC
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS--------DGTVIAVKQLSSKSR-QGNREFVNEIGMISAQ-QHPNLVKLYGCCVEG 706 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~--------~g~~VAvK~~~~~~~-~~~~~f~~E~~~l~~l-~H~nIv~l~~~~~~~ 706 (869)
.++|.+.+.||+|+||.||+|+.. .+..||||+++.... ...+++.+|+++++++ +||||+++++++..+
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 467888999999999999999862 235799999976533 3457789999999999 999999999999999
Q ss_pred ceEEEEEEeccCCchhhhhhcCCcc-----------cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEE
Q 002899 707 NQLLLVYEYMKNNCLSRAIFGKDTE-----------YRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLL 775 (869)
Q Consensus 707 ~~~~lV~E~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl 775 (869)
+..++||||+++|+|.+++...... ....+++..+..++.||++||+|||+.+ |+||||||+|||+
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCcceEEE
Confidence 9999999999999999999765321 1235899999999999999999999997 9999999999999
Q ss_pred cCCCcEEEeecCCceeecCCCc-cccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHc-CCCCCCC
Q 002899 776 DKDLNAKISDFGLAKLYEEDKT-HISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNY 845 (869)
Q Consensus 776 ~~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~ 845 (869)
+.++.+||+|||+++....... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||..
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~ 296 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 296 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999999999987654322 22233457889999999999999999999999999999999 9999864
No 108
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-33 Score=307.59 Aligned_cols=203 Identities=29% Similarity=0.468 Sum_probs=169.1
Q ss_pred HHhcCCCCCCeeeccCceEEEEEEE-cCCcEEEEEEecccCc-----hhhHHHHHHHHHHHhc---CCCceeeEEeEEee
Q 002899 635 AATNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSR-----QGNREFVNEIGMISAQ---QHPNLVKLYGCCVE 705 (869)
Q Consensus 635 ~~t~~f~~~~~IG~G~fG~Vyka~~-~~g~~VAvK~~~~~~~-----~~~~~f~~E~~~l~~l---~H~nIv~l~~~~~~ 705 (869)
..+++|++.+.||+|+||+||+|+. .+++.||||++..... .....+.+|+++++++ +||||+++++++..
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~ 85 (308)
T 3g33_A 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT 85 (308)
T ss_dssp ----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred ccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeec
Confidence 3467899999999999999999996 4689999999864321 1234566777776665 59999999999987
Q ss_pred Cc-----eEEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCc
Q 002899 706 GN-----QLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLN 780 (869)
Q Consensus 706 ~~-----~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~ 780 (869)
.. ..++||||++ |+|.+++..... ..+++..+..++.|+++||+|||+++ |+||||||+|||++.++.
T Consensus 86 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~---~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~ 158 (308)
T 3g33_A 86 SRTDREIKVTLVFEHVD-QDLRTYLDKAPP---PGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGT 158 (308)
T ss_dssp CCSSSEEEEEEEEECCC-CBHHHHHHTCCT---TCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCTTTEEECTTSC
T ss_pred cCCCCceeEEEEehhhh-cCHHHHHhhccC---CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCC
Confidence 55 5799999998 599998876532 24899999999999999999999998 999999999999999999
Q ss_pred EEEeecCCceeecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 002899 781 AKISDFGLAKLYEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNYR 846 (869)
Q Consensus 781 ~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~ 846 (869)
+||+|||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 159 ~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 222 (308)
T 3g33_A 159 VKLADFGLARIYSYQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGN 222 (308)
T ss_dssp EEECSCSCTTTSTTCC--CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCS
T ss_pred EEEeeCccccccCCCc--ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999998664332 223457899999999999999999999999999999999999999653
No 109
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=5.9e-34 Score=312.81 Aligned_cols=202 Identities=29% Similarity=0.538 Sum_probs=167.3
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCc----EEEEEEecccC-chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGT----VIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLL 710 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~----~VAvK~~~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 710 (869)
.++|++.++||+|+||.||+|++. +++ +||+|.+.... ....++|.+|++++++++||||+++++++.+.. .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~ 92 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence 356888999999999999999964 343 46888876443 344678999999999999999999999998764 78
Q ss_pred EEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCce
Q 002899 711 LVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAK 790 (869)
Q Consensus 711 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~ 790 (869)
+|+||+++|+|.+++.... ..+++..+..++.|+++||+|||+++ |+||||||+|||++.++.+||+|||+++
T Consensus 93 ~v~e~~~~g~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 165 (327)
T 3poz_A 93 LITQLMPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp EEEECCTTCBHHHHHHHST----TSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTHHH
T ss_pred EEEEecCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCChheEEECCCCCEEEccCccee
Confidence 9999999999999997643 26899999999999999999999997 9999999999999999999999999998
Q ss_pred eecCCCcc-ccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHc-CCCCCCCC
Q 002899 791 LYEEDKTH-ISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNYR 846 (869)
Q Consensus 791 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~ 846 (869)
........ ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||...
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 223 (327)
T 3poz_A 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223 (327)
T ss_dssp HHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred EccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCC
Confidence 76543322 1223456889999999999999999999999999999999 99999654
No 110
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=2.7e-34 Score=309.15 Aligned_cols=205 Identities=26% Similarity=0.445 Sum_probs=180.4
Q ss_pred HHhcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEE
Q 002899 635 AATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 713 (869)
Q Consensus 635 ~~t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 713 (869)
...++|++.+.||+|+||.||+|... +++.||+|++... ....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 10 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 88 (288)
T 3kfa_A 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 88 (288)
T ss_dssp CCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred ccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEE
Confidence 34667889999999999999999986 4788999998754 334678999999999999999999999999999999999
Q ss_pred EeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeec
Q 002899 714 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 793 (869)
Q Consensus 714 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~ 793 (869)
||+++++|.+++..... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++....
T Consensus 89 e~~~~~~L~~~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~ 162 (288)
T 3kfa_A 89 EFMTYGNLLDYLRECNR---QEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMT 162 (288)
T ss_dssp ECCTTEEHHHHHHHCCT---TTSCHHHHHHHHHHHHHHHHHHHHHT---CCCSCCSGGGEEECGGGCEEECCCCGGGTSC
T ss_pred EcCCCCcHHHHHHhccc---CCccHhHHHHHHHHHHHHHHHHHHCC---ccCCCCCcceEEEcCCCCEEEccCccceecc
Confidence 99999999999976432 36899999999999999999999998 9999999999999999999999999998776
Q ss_pred CCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHc-CCCCCCCC
Q 002899 794 EDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNYR 846 (869)
Q Consensus 794 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~ 846 (869)
...........+|+.|+|||++....++.++||||||+++|||++ |+.||...
T Consensus 163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~ 216 (288)
T 3kfa_A 163 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 216 (288)
T ss_dssp SSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred CCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 544333344567889999999998999999999999999999999 99998653
No 111
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=1.8e-33 Score=308.16 Aligned_cols=199 Identities=27% Similarity=0.368 Sum_probs=176.6
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCch------hhHHHHHHHHHHHhcCCCceeeEEeEEeeCceE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQ------GNREFVNEIGMISAQQHPNLVKLYGCCVEGNQL 709 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~~------~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 709 (869)
.++|++.+.||+|+||.||+|... +++.||||++...... ...++.+|+++++.++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 467889999999999999999976 6899999998654322 256789999999999999999999999999999
Q ss_pred EEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCC----cEEEee
Q 002899 710 LLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDL----NAKISD 785 (869)
Q Consensus 710 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~----~~kl~D 785 (869)
++||||+++++|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++ .+||+|
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~lH~~~---ivH~dikp~NIl~~~~~~~~~~~kl~D 162 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQKE-----SLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLID 162 (321)
T ss_dssp EEEECCCCSCBHHHHHHTCS-----CEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECC
T ss_pred EEEEEcCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChHHEEEecCCCCcCCEEEcc
Confidence 99999999999999996543 5789999999999999999999998 99999999999999887 799999
Q ss_pred cCCceeecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 786 FGLAKLYEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 786 FGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
||++........ .....||+.|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus 163 fg~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 220 (321)
T 2a2a_A 163 FGLAHEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220 (321)
T ss_dssp CTTCEECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred CccceecCcccc--ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCC
Confidence 999987654322 2345689999999999988999999999999999999999999964
No 112
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.2e-34 Score=321.37 Aligned_cols=206 Identities=31% Similarity=0.406 Sum_probs=174.7
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc------CCcEEEEEEeccc-CchhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS------DGTVIAVKQLSSK-SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQL 709 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~------~g~~VAvK~~~~~-~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 709 (869)
.++|++.+.||+|+||.||+|++. +++.||||+++.. ......++.+|+.++++++||||+++++++...+..
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 356888999999999999999953 4678999999754 344456789999999999999999999999999999
Q ss_pred EEEEEeccCCchhhhhhcCCc--ccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCC---cEEEe
Q 002899 710 LLVYEYMKNNCLSRAIFGKDT--EYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDL---NAKIS 784 (869)
Q Consensus 710 ~lV~E~~~~gsL~~~l~~~~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~---~~kl~ 784 (869)
++||||+++|+|.+++..... .....+++..++.++.||++||+|||+++ |+||||||+|||++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEEecCCCCceEEEC
Confidence 999999999999999875432 12235899999999999999999999998 99999999999999555 59999
Q ss_pred ecCCceeecCCC-ccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHc-CCCCCCC
Q 002899 785 DFGLAKLYEEDK-THISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNY 845 (869)
Q Consensus 785 DFGla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~ 845 (869)
|||+++...... ........||+.|+|||++.+..++.++|||||||++|||++ |+.||..
T Consensus 227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~ 289 (367)
T 3l9p_A 227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 289 (367)
T ss_dssp CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 999997653222 122223567899999999999999999999999999999998 9999964
No 113
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=7.3e-34 Score=314.26 Aligned_cols=210 Identities=24% Similarity=0.323 Sum_probs=173.4
Q ss_pred HHHHhcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEeccc-----CchhhHHHHHHHHHHHhcCCCceeeEEeEEeeC
Q 002899 633 IKAATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSK-----SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEG 706 (869)
Q Consensus 633 i~~~t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~-----~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~ 706 (869)
+....++|++.+.||+|+||.||+|... +++.||+|++... .....+.+.+|++++++++||||+++++++.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 3556788999999999999999999975 6789999998643 234457899999999999999999999999999
Q ss_pred ceEEEEEEeccCCchhhhhhcCCc-----------------------------------ccccCCCHHHHHHHHHHHHHH
Q 002899 707 NQLLLVYEYMKNNCLSRAIFGKDT-----------------------------------EYRLKLDWPTRKKICIGIARG 751 (869)
Q Consensus 707 ~~~~lV~E~~~~gsL~~~l~~~~~-----------------------------------~~~~~l~~~~~~~i~~~ia~g 751 (869)
+..++||||+++|+|.+++..... .....+++..+..++.||++|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 999999999999999998852100 001134677888999999999
Q ss_pred HHHHHhcCCCCeEEcCCCCCCEEEcCCC--cEEEeecCCceeecCCCc---cccccccccccccchhhccc--CCCCchh
Q 002899 752 LAYLHEDSRIKIVHRDIKTSNVLLDKDL--NAKISDFGLAKLYEEDKT---HISTRIAGTIGYMAPEYAMR--GYLTSKA 824 (869)
Q Consensus 752 L~yLH~~~~~~iiH~Dlk~~NILl~~~~--~~kl~DFGla~~~~~~~~---~~~~~~~gt~~y~aPE~~~~--~~~~~k~ 824 (869)
|+|||+.+ |+||||||+|||++.++ .+||+|||++..+..... .......||+.|+|||++.. ..++.++
T Consensus 181 l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 257 (345)
T 3hko_A 181 LHYLHNQG---ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257 (345)
T ss_dssp HHHHHHTT---EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHH
T ss_pred HHHHHHCC---ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHH
Confidence 99999998 99999999999998776 899999999987643221 12234578999999999875 6789999
Q ss_pred HHHHHHHHHHHHHcCCCCCCC
Q 002899 825 DVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 825 DvwSlGvil~elltG~~p~~~ 845 (869)
||||||+++|||++|+.||..
T Consensus 258 DiwslG~il~el~~g~~pf~~ 278 (345)
T 3hko_A 258 DAWSAGVLLHLLLMGAVPFPG 278 (345)
T ss_dssp HHHHHHHHHHHHHHSSCSSCC
T ss_pred HHHHHHHHHHHHHHCCCCCCC
Confidence 999999999999999999964
No 114
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=1.6e-33 Score=305.05 Aligned_cols=196 Identities=29% Similarity=0.457 Sum_probs=166.2
Q ss_pred hcCCCCCCeeeccCceEEEEEEEcCCcEEEEEEecccCchhhHHHHHHHHHHHh--cCCCceeeEEeEEee----CceEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISA--QQHPNLVKLYGCCVE----GNQLL 710 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~--l~H~nIv~l~~~~~~----~~~~~ 710 (869)
.++|++.+.||+|+||.||+|+. +++.||||++... ....+..|.+++.. ++||||+++++++.. ....+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 56789999999999999999988 6899999998643 34566677777766 799999999998765 34689
Q ss_pred EEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEEcCCCCCCEEEcCCCcEE
Q 002899 711 LVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLH--------EDSRIKIVHRDIKTSNVLLDKDLNAK 782 (869)
Q Consensus 711 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~iiH~Dlk~~NILl~~~~~~k 782 (869)
+||||+++|+|.+++... .+++..+..++.|+++||+||| +.+ |+||||||+|||++.++.+|
T Consensus 83 lv~e~~~~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nill~~~~~~k 153 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQLT------TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA---IAHRDLKSKNILVKKNGQCC 153 (301)
T ss_dssp EEECCCTTCBHHHHHTTC------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE---EECSCCCGGGEEECTTSCEE
T ss_pred EehhhccCCCHHHHHhhc------ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC---eecCCCChHhEEEcCCCCEE
Confidence 999999999999999543 5899999999999999999999 665 99999999999999999999
Q ss_pred EeecCCceeecCCCccc---cccccccccccchhhcccC------CCCchhHHHHHHHHHHHHHcC----------CCCC
Q 002899 783 ISDFGLAKLYEEDKTHI---STRIAGTIGYMAPEYAMRG------YLTSKADVYSFGVVTLEIVSG----------KSNT 843 (869)
Q Consensus 783 l~DFGla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~k~DvwSlGvil~elltG----------~~p~ 843 (869)
|+|||+++......... .....||+.|+|||++.+. .+++++||||||+++|||++| +.||
T Consensus 154 l~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf 233 (301)
T 3q4u_A 154 IADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPF 233 (301)
T ss_dssp ECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred EeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccc
Confidence 99999998765443321 2234799999999999876 455799999999999999999 8888
Q ss_pred CC
Q 002899 844 NY 845 (869)
Q Consensus 844 ~~ 845 (869)
..
T Consensus 234 ~~ 235 (301)
T 3q4u_A 234 YD 235 (301)
T ss_dssp TT
T ss_pred cc
Confidence 54
No 115
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=2.5e-33 Score=300.93 Aligned_cols=199 Identities=26% Similarity=0.424 Sum_probs=175.4
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccC--chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 713 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 713 (869)
.++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 578899999999999999999975 58899999986543 334567889999999999999999999999999999999
Q ss_pred EeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCc---EEEeecCCce
Q 002899 714 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLN---AKISDFGLAK 790 (869)
Q Consensus 714 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~---~kl~DFGla~ 790 (869)
||+++++|.+.+.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||++.
T Consensus 85 e~~~~~~l~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~ 156 (284)
T 3kk8_A 85 DLVTGGELFEDIVARE-----FYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAI 156 (284)
T ss_dssp CCCCSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred ecCCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---cCcCCCCHHHEEEecCCCCCcEEEeeceeeE
Confidence 9999999988886542 5899999999999999999999998 999999999999986655 9999999998
Q ss_pred eecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 791 LYEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 791 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
....... .....||+.|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus 157 ~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~ 209 (284)
T 3kk8_A 157 EVNDSEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD 209 (284)
T ss_dssp ECCSSCB--CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred EcccCcc--ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCC
Confidence 7654332 2335789999999999999999999999999999999999999954
No 116
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.3e-33 Score=314.43 Aligned_cols=199 Identities=26% Similarity=0.370 Sum_probs=165.4
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEEEe
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEY 715 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~ 715 (869)
.++|++.+.||+|+||.||+|+.. +++.||||++.... .....+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 467889999999999999999976 78999999987543 2346788999999999999999999999999999999999
Q ss_pred ccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCc--EEEeecCCceeec
Q 002899 716 MKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLN--AKISDFGLAKLYE 793 (869)
Q Consensus 716 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~--~kl~DFGla~~~~ 793 (869)
+++|+|.+++.... .+++..+..++.|+++||+|||+++ |+||||||+|||++.++. +||+|||+++...
T Consensus 98 ~~~~~L~~~l~~~~-----~~~~~~~~~i~~ql~~~L~~LH~~~---ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~ 169 (361)
T 3uc3_A 98 ASGGELYERICNAG-----RFSEDEARFFFQQLLSGVSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSV 169 (361)
T ss_dssp CCSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CCSCCCCGGGEEECSSSSCCEEECCCCCC----
T ss_pred CCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCceEEEeecCcccccc
Confidence 99999999886543 5899999999999999999999998 999999999999987765 9999999987543
Q ss_pred CCCccccccccccccccchhhcccCCCCch-hHHHHHHHHHHHHHcCCCCCCCC
Q 002899 794 EDKTHISTRIAGTIGYMAPEYAMRGYLTSK-ADVYSFGVVTLEIVSGKSNTNYR 846 (869)
Q Consensus 794 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k-~DvwSlGvil~elltG~~p~~~~ 846 (869)
... ......||+.|+|||++.+..+..+ +|||||||++|||++|+.||...
T Consensus 170 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~ 221 (361)
T 3uc3_A 170 LHS--QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDP 221 (361)
T ss_dssp -------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC--
T ss_pred ccC--CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCC
Confidence 222 1233569999999999988777665 89999999999999999999753
No 117
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=1.1e-33 Score=301.68 Aligned_cols=198 Identities=31% Similarity=0.566 Sum_probs=163.4
Q ss_pred cCCCCCCeeeccCceEEEEEEEcCCcEEEEEEecccCc----hhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEE
Q 002899 638 NNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSR----QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 713 (869)
Q Consensus 638 ~~f~~~~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~~----~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 713 (869)
++|++.+.||+|+||.||+|... ++.||||+++.... ...+.+.+|+++++.++||||+++++++.+++..++||
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM 85 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence 57888999999999999999975 88999999865432 22467889999999999999999999999999999999
Q ss_pred EeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcC--------CCcEEEee
Q 002899 714 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDK--------DLNAKISD 785 (869)
Q Consensus 714 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~--------~~~~kl~D 785 (869)
||+++++|.+++... .+++..+..++.|+++||+|||+++..+|+||||||+|||++. ++.+||+|
T Consensus 86 e~~~~~~L~~~~~~~------~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~D 159 (271)
T 3dtc_A 86 EFARGGPLNRVLSGK------RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITD 159 (271)
T ss_dssp ECCTTEEHHHHHTSS------CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECC
T ss_pred EcCCCCCHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEcc
Confidence 999999999988543 5899999999999999999999987556899999999999986 77899999
Q ss_pred cCCceeecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 786 FGLAKLYEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 786 FGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
||++........ ....||+.|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus 160 fg~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~ 216 (271)
T 3dtc_A 160 FGLAREWHRTTK---MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRG 216 (271)
T ss_dssp CCC----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTT
T ss_pred CCcccccccccc---cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 999986654322 234689999999999999999999999999999999999999964
No 118
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=4e-34 Score=328.24 Aligned_cols=202 Identities=31% Similarity=0.524 Sum_probs=170.2
Q ss_pred HhcCCCCCCeeeccCceEEEEEEEcCCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEEEe
Q 002899 636 ATNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEY 715 (869)
Q Consensus 636 ~t~~f~~~~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~ 715 (869)
..++|++.+.||+|+||.||+|.+.++..||||+++... ...++|.+|++++++++||||+++++++.+ +..++||||
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~ 259 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY 259 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehh
Confidence 456788899999999999999999888889999997643 335689999999999999999999999876 678999999
Q ss_pred ccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeecCC
Q 002899 716 MKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEED 795 (869)
Q Consensus 716 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~ 795 (869)
+++|+|.+++.... ...+++..+..++.||++||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 260 ~~~gsL~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 333 (452)
T 1fmk_A 260 MSKGSLLDFLKGET---GKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDN 333 (452)
T ss_dssp CTTCBHHHHHSHHH---HTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCTTC-----
T ss_pred hcCCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEECCCCCEEECCCccceecCCC
Confidence 99999999996432 225899999999999999999999998 999999999999999999999999999876543
Q ss_pred CccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHc-CCCCCCC
Q 002899 796 KTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNY 845 (869)
Q Consensus 796 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~ 845 (869)
.........+++.|+|||++....++.++||||||+++|||++ |+.||..
T Consensus 334 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~ 384 (452)
T 1fmk_A 334 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 384 (452)
T ss_dssp ---------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred ceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCC
Confidence 3222233456789999999998999999999999999999999 9999864
No 119
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1.6e-33 Score=306.56 Aligned_cols=200 Identities=28% Similarity=0.494 Sum_probs=167.0
Q ss_pred hcCCCCCCeeeccCceEEEEEEEcCCcEEEEEEecccC--chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 714 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 714 (869)
.++|.+.+.||+|+||.||+|... ..+|+|.++... ....+.|.+|++++++++||||+++++++. .+..++|||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEe
Confidence 357888999999999999999864 358899876542 334567999999999999999999999875 456899999
Q ss_pred eccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeecC
Q 002899 715 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEE 794 (869)
Q Consensus 715 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~~ 794 (869)
|+++++|.+++.... ..+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 112 ~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~ 184 (307)
T 3lb7_A 112 WCEGSSLYKHLHVQE----TKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp CCSSCBHHHHHHTSC----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCSSSEEECTTSCEEECCCCSSCC---
T ss_pred cCCCCcHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCChhhEEEcCCCCEEEccCCCceeccc
Confidence 999999999996543 26899999999999999999999998 99999999999999999999999999986543
Q ss_pred CC-ccccccccccccccchhhcc---cCCCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 002899 795 DK-THISTRIAGTIGYMAPEYAM---RGYLTSKADVYSFGVVTLEIVSGKSNTNYR 846 (869)
Q Consensus 795 ~~-~~~~~~~~gt~~y~aPE~~~---~~~~~~k~DvwSlGvil~elltG~~p~~~~ 846 (869)
.. ........||+.|+|||++. ...++.++||||||+++|||++|+.||...
T Consensus 185 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~ 240 (307)
T 3lb7_A 185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHI 240 (307)
T ss_dssp ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred ccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccC
Confidence 21 22223457899999999986 567899999999999999999999999653
No 120
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.4e-33 Score=324.07 Aligned_cols=198 Identities=29% Similarity=0.478 Sum_probs=175.1
Q ss_pred cCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCc---hhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEE
Q 002899 638 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR---QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 713 (869)
Q Consensus 638 ~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~---~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 713 (869)
++|.+.+.||+|+||.||+|+.. +|+.||||++..... .....+.+|+++++.++||||+++++++...+..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 56888999999999999999976 789999999865421 23457889999999999999999999999999999999
Q ss_pred EeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeec
Q 002899 714 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 793 (869)
Q Consensus 714 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~ 793 (869)
||+++|+|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++....
T Consensus 96 E~~~gg~L~~~l~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~ 167 (476)
T 2y94_A 96 EYVSGGELFDYICKNG-----RLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMS 167 (476)
T ss_dssp ECCSSEEHHHHTTSSS-----SCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred eCCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---CCcccccHHHEEEecCCCeEEEeccchhhcc
Confidence 9999999999986543 6899999999999999999999998 9999999999999999999999999998765
Q ss_pred CCCccccccccccccccchhhcccCCC-CchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 794 EDKTHISTRIAGTIGYMAPEYAMRGYL-TSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 794 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
... ......||+.|+|||++.+..+ +.++||||+||++|||++|+.||..
T Consensus 168 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~ 218 (476)
T 2y94_A 168 DGE--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDD 218 (476)
T ss_dssp TTC--CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ccc--cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCC
Confidence 432 2234579999999999987654 7899999999999999999999964
No 121
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.8e-33 Score=300.84 Aligned_cols=197 Identities=28% Similarity=0.483 Sum_probs=152.0
Q ss_pred cCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccC---chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEE
Q 002899 638 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 713 (869)
Q Consensus 638 ~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 713 (869)
++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 57999999999999999999964 68999999987542 233567889999999999999999999999999999999
Q ss_pred EeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeec
Q 002899 714 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 793 (869)
Q Consensus 714 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~ 793 (869)
||+ ++++.+.+.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++....
T Consensus 93 e~~-~~~l~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 163 (275)
T 2eue_A 93 EYA-GNELFDYIVQRD-----KMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMT 163 (275)
T ss_dssp ECC-CEEHHHHHHTSS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCSSCC----
T ss_pred hhc-CCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---CeeccCChHhEEECCCCCEEEeecccceecc
Confidence 999 567877776543 5899999999999999999999998 9999999999999999999999999998665
Q ss_pred CCCccccccccccccccchhhcccCCC-CchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 794 EDKTHISTRIAGTIGYMAPEYAMRGYL-TSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 794 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
.... .....||+.|+|||++.+..+ +.++||||||+++|||++|+.||..
T Consensus 164 ~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 214 (275)
T 2eue_A 164 DGNF--LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 214 (275)
T ss_dssp -------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCC
T ss_pred Cccc--ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCC
Confidence 4322 223468999999999987655 7899999999999999999999964
No 122
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=1.4e-33 Score=302.18 Aligned_cols=201 Identities=31% Similarity=0.533 Sum_probs=175.3
Q ss_pred hcCCCCCCeeeccCceEEEEEEEcCCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEEEec
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYM 716 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~~ 716 (869)
.++|++.+.||+|+||.||+|...+++.||||.++... ...+.+.+|++++++++||||+++++++.. +..++||||+
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~ 89 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYM 89 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEecC
Confidence 45788899999999999999999888899999987543 335789999999999999999999999864 5689999999
Q ss_pred cCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeecCCC
Q 002899 717 KNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEEDK 796 (869)
Q Consensus 717 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~ 796 (869)
++++|.+++.... ...+++..+..++.|++.||+|||+++ |+||||||+||++++++.+||+|||++.......
T Consensus 90 ~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 163 (279)
T 1qpc_A 90 ENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 163 (279)
T ss_dssp TTCBHHHHTTSHH---HHTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECSSSC
T ss_pred CCCCHHHHHhcCC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHhhEEEcCCCCEEECCCcccccccCcc
Confidence 9999999986432 226899999999999999999999998 9999999999999999999999999998776543
Q ss_pred ccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHc-CCCCCCC
Q 002899 797 THISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNY 845 (869)
Q Consensus 797 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~ 845 (869)
........+++.|+|||++....++.++||||||+++|||++ |+.||..
T Consensus 164 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~ 213 (279)
T 1qpc_A 164 YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 213 (279)
T ss_dssp EECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred cccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcc
Confidence 333333457789999999998889999999999999999999 9999864
No 123
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=9.8e-34 Score=339.60 Aligned_cols=201 Identities=27% Similarity=0.380 Sum_probs=176.8
Q ss_pred HhcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEeccc---CchhhHHHHHHHHHHHhc-CCCceeeEEeEEeeCceEE
Q 002899 636 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSK---SRQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQLL 710 (869)
Q Consensus 636 ~t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~---~~~~~~~f~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~ 710 (869)
..++|++.++||+|+||.||+|+.. +++.||||+++.. .......+..|.+++..+ +||+|+++++++.+.+.+|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 3568999999999999999999976 5789999998753 223356678899999887 7999999999999999999
Q ss_pred EEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCce
Q 002899 711 LVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAK 790 (869)
Q Consensus 711 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~ 790 (869)
+||||+++|+|.+++.... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++++||+|||+++
T Consensus 419 lV~E~~~gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~g---IiHrDLKp~NILl~~~g~ikL~DFGla~ 490 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVG-----RFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCK 490 (674)
T ss_dssp EEEECCCSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTS---EECCCCCSTTEEECSSSCEEECCCTTCE
T ss_pred EEEeCcCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC---eEeccCChhhEEEcCCCcEEEeecceee
Confidence 9999999999999997543 6899999999999999999999998 9999999999999999999999999998
Q ss_pred eecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 791 LYEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 791 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 491 ~~~~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~ 544 (674)
T 3pfq_A 491 ENIWDGV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG 544 (674)
T ss_dssp ECCCTTC-CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ccccCCc-ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCC
Confidence 6443222 23346799999999999999999999999999999999999999965
No 124
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=9.7e-34 Score=310.80 Aligned_cols=202 Identities=29% Similarity=0.465 Sum_probs=170.0
Q ss_pred cCCCCCCeeeccCceEEEEEEEc-CCc----EEEEEEecccC-chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEE
Q 002899 638 NNFDPANKVGEGGFGSVYKGILS-DGT----VIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLL 711 (869)
Q Consensus 638 ~~f~~~~~IG~G~fG~Vyka~~~-~g~----~VAvK~~~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 711 (869)
++|++.+.||+|+||.||+|.+. +++ +||+|.+.... ......+.+|+.++++++||||+++++++. ++..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 56788999999999999999965 344 37888875443 333467889999999999999999999986 457899
Q ss_pred EEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCcee
Q 002899 712 VYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKL 791 (869)
Q Consensus 712 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~ 791 (869)
||||+++|+|.+++.... ..+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 92 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 164 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQHR----GALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADL 164 (325)
T ss_dssp EEECCTTCBSHHHHHSSG----GGSCTTHHHHHHHHHHHHHHHHHHTT---CCCSCCSSTTEEESSSSCEEECSCSGGGG
T ss_pred EEEeCCCCCHHHHHHHcc----ccCCHHHHHHHHHHHHHHHHHHHhCC---CCCCccchheEEECCCCeEEECCCCcccc
Confidence 999999999999997642 25889999999999999999999998 99999999999999999999999999987
Q ss_pred ecCCCcc-ccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCC
Q 002899 792 YEEDKTH-ISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNYRP 847 (869)
Q Consensus 792 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~ 847 (869)
....... ......||+.|+|||++....++.++||||||+++|||++ |+.||....
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~ 222 (325)
T 3kex_A 165 LPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLR 222 (325)
T ss_dssp SCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSC
T ss_pred cCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccC
Confidence 6543322 2234567889999999998999999999999999999999 999997543
No 125
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=7.2e-34 Score=311.71 Aligned_cols=200 Identities=24% Similarity=0.415 Sum_probs=165.4
Q ss_pred cCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCch-hhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEEEe
Q 002899 638 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQ-GNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEY 715 (869)
Q Consensus 638 ~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~~-~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~ 715 (869)
++|.+.+.||+|+||.||+|... +++.||||++...... ....+.+|++++++++||||+++++++..++..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 46888999999999999999976 6899999998654322 223566799999999999999999999999999999999
Q ss_pred ccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeecCC
Q 002899 716 MKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEED 795 (869)
Q Consensus 716 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~ 795 (869)
++ |+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 82 ~~-~~l~~~~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 153 (324)
T 3mtl_A 82 LD-KDLKQYLDDCG----NIINMHNVKLFLFQLLRGLAYCHRQK---VLHRDLKPQNLLINERGELKLADFGLARAKSIP 153 (324)
T ss_dssp CS-EEHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCCGGGEEECTTCCEEECSSSEEECC---
T ss_pred cc-cCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCcCHHHEEECCCCCEEEccCcccccccCC
Confidence 98 58888876543 25899999999999999999999998 999999999999999999999999999865433
Q ss_pred Cccccccccccccccchhhccc-CCCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 002899 796 KTHISTRIAGTIGYMAPEYAMR-GYLTSKADVYSFGVVTLEIVSGKSNTNYR 846 (869)
Q Consensus 796 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~ 846 (869)
... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 154 ~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 204 (324)
T 3mtl_A 154 TKT-YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGS 204 (324)
T ss_dssp ----------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccc-cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 222 223468999999999876 56899999999999999999999999654
No 126
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=8.3e-34 Score=326.13 Aligned_cols=197 Identities=26% Similarity=0.354 Sum_probs=165.6
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEeccc--CchhhHHHHHHHHHHHhcCCCceeeEEeEEeeC------c
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSK--SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEG------N 707 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~------~ 707 (869)
.++|++.+.||+|+||.||+|... +++.||||++... .....+++.+|+++++.++|||||++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 467899999999999999999965 6889999998754 334456788999999999999999999999754 4
Q ss_pred eEEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecC
Q 002899 708 QLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFG 787 (869)
Q Consensus 708 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFG 787 (869)
..++||||++++ +.+.+.. .+++..+..++.||++||+|||+.+ |+||||||+|||++.++.+||+|||
T Consensus 141 ~~~lv~E~~~~~-l~~~~~~-------~l~~~~~~~~~~qil~aL~~lH~~~---iiHrDlkp~NIll~~~~~~kl~DFG 209 (464)
T 3ttj_A 141 DVYLVMELMDAN-LCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 209 (464)
T ss_dssp EEEEEEECCSEE-HHHHHTS-------CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCC
T ss_pred eEEEEEeCCCCC-HHHHHhh-------cCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChHhEEEeCCCCEEEEEEE
Confidence 579999999865 5555532 4789999999999999999999998 9999999999999999999999999
Q ss_pred CceeecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 002899 788 LAKLYEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNYR 846 (869)
Q Consensus 788 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~ 846 (869)
+++...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 210 ~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~ 266 (464)
T 3ttj_A 210 LARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 266 (464)
T ss_dssp CC-----CC--CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred eeeecCCCc--ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 998765432 233467999999999999999999999999999999999999999653
No 127
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=2.8e-33 Score=315.90 Aligned_cols=196 Identities=24% Similarity=0.307 Sum_probs=162.0
Q ss_pred cCCCCC-CeeeccCceEEEEEEEc-CCcEEEEEEecccCchhhHHHHHHHHHHH-hcCCCceeeEEeEEee----CceEE
Q 002899 638 NNFDPA-NKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMIS-AQQHPNLVKLYGCCVE----GNQLL 710 (869)
Q Consensus 638 ~~f~~~-~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~~~~~~f~~E~~~l~-~l~H~nIv~l~~~~~~----~~~~~ 710 (869)
++|.+. ++||+|+||.||+|... +++.||||++.. ...+.+|++++. ..+||||+++++++.. .+..+
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~ 135 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 135 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence 456565 68999999999999975 688999999863 245677888764 5689999999999876 56789
Q ss_pred EEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcC---CCcEEEeecC
Q 002899 711 LVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDK---DLNAKISDFG 787 (869)
Q Consensus 711 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~---~~~~kl~DFG 787 (869)
+||||+++|+|.+++..... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++. ++.+||+|||
T Consensus 136 lv~E~~~gg~L~~~l~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~~~kl~DFG 209 (400)
T 1nxk_A 136 IVMECLDGGELFSRIQDRGD---QAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFG 209 (400)
T ss_dssp EEEECCCSEEHHHHHHCC------CCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSTTCCEEECCCT
T ss_pred EEEEeCCCCcHHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCcceEEEecCCCCccEEEEecc
Confidence 99999999999999976432 25899999999999999999999998 999999999999997 7899999999
Q ss_pred CceeecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 002899 788 LAKLYEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNYR 846 (869)
Q Consensus 788 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~ 846 (869)
+++...... ......||+.|+|||++....++.++|||||||++|||++|+.||...
T Consensus 210 ~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 266 (400)
T 1nxk_A 210 FAKETTSHN--SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 266 (400)
T ss_dssp TCEECC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCC
T ss_pred cccccCCCC--ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCC
Confidence 998765322 123457899999999999999999999999999999999999999653
No 128
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=8.3e-34 Score=312.64 Aligned_cols=199 Identities=26% Similarity=0.378 Sum_probs=174.6
Q ss_pred HhcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCc--------hhhHHHHHHHHHHHhcCCCceeeEEeEEeeC
Q 002899 636 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR--------QGNREFVNEIGMISAQQHPNLVKLYGCCVEG 706 (869)
Q Consensus 636 ~t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~--------~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~ 706 (869)
..++|++.+.||+|+||.||+|+.. +++.||||++..... .....+.+|++++++++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 3568999999999999999999964 688999999876431 1334678899999999999999999999999
Q ss_pred ceEEEEEEeccCC-chhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEee
Q 002899 707 NQLLLVYEYMKNN-CLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISD 785 (869)
Q Consensus 707 ~~~~lV~E~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~D 785 (869)
+..++||||+..| +|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~-----~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~D 173 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHP-----RLDEPLASYIFRQLVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLID 173 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCC-----CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECC
T ss_pred CEEEEEEEeCCCCccHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC---eEEeccCHHHEEEcCCCcEEEee
Confidence 9999999999777 9999886543 5899999999999999999999998 99999999999999999999999
Q ss_pred cCCceeecCCCccccccccccccccchhhcccCCC-CchhHHHHHHHHHHHHHcCCCCCC
Q 002899 786 FGLAKLYEEDKTHISTRIAGTIGYMAPEYAMRGYL-TSKADVYSFGVVTLEIVSGKSNTN 844 (869)
Q Consensus 786 FGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~k~DvwSlGvil~elltG~~p~~ 844 (869)
||++........ .....||+.|+|||++.+..+ +.++||||||+++|||++|+.||.
T Consensus 174 fg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 231 (335)
T 3dls_A 174 FGSAAYLERGKL--FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFC 231 (335)
T ss_dssp CTTCEECCTTCC--BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCS
T ss_pred cccceECCCCCc--eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchh
Confidence 999987754332 233578999999999987766 889999999999999999999985
No 129
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=2.8e-33 Score=305.57 Aligned_cols=202 Identities=24% Similarity=0.364 Sum_probs=169.3
Q ss_pred hcCCCCC-CeeeccCceEEEEEEEc-CCcEEEEEEecccCchhhHHHHHHHHHHHh-cCCCceeeEEeEEeeCceEEEEE
Q 002899 637 TNNFDPA-NKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISA-QQHPNLVKLYGCCVEGNQLLLVY 713 (869)
Q Consensus 637 t~~f~~~-~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~-l~H~nIv~l~~~~~~~~~~~lV~ 713 (869)
.+.|.+. +.||+|+||.||+|... +++.||||++..........+.+|++++.+ .+||||+++++++.+++..++||
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~ 90 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF 90 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 3567774 78999999999999964 689999999977655556789999999988 47999999999999999999999
Q ss_pred EeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCc---EEEeecCCce
Q 002899 714 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLN---AKISDFGLAK 790 (869)
Q Consensus 714 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~---~kl~DFGla~ 790 (869)
||+++|+|.+++.... .+++..+..++.|+++||+|||+++ |+||||||+|||++.++. +||+|||++.
T Consensus 91 e~~~~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~ 162 (316)
T 2ac3_A 91 EKMRGGSILSHIHKRR-----HFNELEASVVVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGS 162 (316)
T ss_dssp ECCTTCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESCSSSSCSEEECCTTCCC
T ss_pred EcCCCCcHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEEccCCCcCceEEEEccCcc
Confidence 9999999999986542 6899999999999999999999998 999999999999998776 9999999987
Q ss_pred eecCCCc------cccccccccccccchhhccc-----CCCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 002899 791 LYEEDKT------HISTRIAGTIGYMAPEYAMR-----GYLTSKADVYSFGVVTLEIVSGKSNTNYR 846 (869)
Q Consensus 791 ~~~~~~~------~~~~~~~gt~~y~aPE~~~~-----~~~~~k~DvwSlGvil~elltG~~p~~~~ 846 (869)
....... .......||+.|+|||++.. ..++.++|||||||++|||++|+.||...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 229 (316)
T 2ac3_A 163 GIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGR 229 (316)
T ss_dssp -------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCC
T ss_pred ccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccc
Confidence 6542211 11123458999999999875 45789999999999999999999999754
No 130
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.5e-33 Score=314.35 Aligned_cols=202 Identities=20% Similarity=0.285 Sum_probs=167.8
Q ss_pred HhcCCCCCCeeeccCceEEEEEEEcC------CcEEEEEEecccCchh-----------hHHHHHHHHHHHhcCCCceee
Q 002899 636 ATNNFDPANKVGEGGFGSVYKGILSD------GTVIAVKQLSSKSRQG-----------NREFVNEIGMISAQQHPNLVK 698 (869)
Q Consensus 636 ~t~~f~~~~~IG~G~fG~Vyka~~~~------g~~VAvK~~~~~~~~~-----------~~~f~~E~~~l~~l~H~nIv~ 698 (869)
..++|.+.+.||+|+||.||+|.+.. ++.||||++....... ...+..|+..+..++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 34578899999999999999999764 4789999986553221 122345566677788999999
Q ss_pred EEeEEeeC----ceEEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEE
Q 002899 699 LYGCCVEG----NQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVL 774 (869)
Q Consensus 699 l~~~~~~~----~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NIL 774 (869)
+++++... ...++||||+ +++|.+++.... ..+++..+..++.||+.||+|||+.+ |+||||||+|||
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~----~~l~~~~~~~i~~qi~~~l~~lH~~~---iiHrDlkp~Nil 184 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA----KRFSRKTVLQLSLRILDILEYIHEHE---YVHGDIKASNLL 184 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEE
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEEecCCHHHEE
Confidence 99998875 4589999999 999999986542 26899999999999999999999997 999999999999
Q ss_pred Ec--CCCcEEEeecCCceeecCCCccc------cccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 775 LD--KDLNAKISDFGLAKLYEEDKTHI------STRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 775 l~--~~~~~kl~DFGla~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
++ .++.+||+|||+++.+....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 185 l~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~ 263 (364)
T 3op5_A 185 LNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWED 263 (364)
T ss_dssp EESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGG
T ss_pred EecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 99 88999999999998765432111 1234599999999999999999999999999999999999999974
No 131
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.2e-33 Score=309.61 Aligned_cols=209 Identities=25% Similarity=0.431 Sum_probs=161.6
Q ss_pred HHhcCCCCCCeeeccCceEEEEEEEcC-C---cEEEEEEeccc--CchhhHHHHHHHHHHHhcCCCceeeEEeEEeeCce
Q 002899 635 AATNNFDPANKVGEGGFGSVYKGILSD-G---TVIAVKQLSSK--SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQ 708 (869)
Q Consensus 635 ~~t~~f~~~~~IG~G~fG~Vyka~~~~-g---~~VAvK~~~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~ 708 (869)
...++|++.+.||+|+||.||+|.... + ..||||+++.. .....+++.+|++++++++||||+++++++...+.
T Consensus 20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 99 (323)
T 3qup_A 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA 99 (323)
T ss_dssp CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence 345689999999999999999999653 2 27999998765 34456789999999999999999999999987765
Q ss_pred E------EEEEEeccCCchhhhhhcCCc-ccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcE
Q 002899 709 L------LLVYEYMKNNCLSRAIFGKDT-EYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNA 781 (869)
Q Consensus 709 ~------~lV~E~~~~gsL~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~ 781 (869)
. ++||||+++|+|.+++..... .....+++..+..++.|+++||+|||+++ |+||||||+|||++.++.+
T Consensus 100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~Dikp~NIli~~~~~~ 176 (323)
T 3qup_A 100 KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAEDMTV 176 (323)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCE
T ss_pred ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC---cccCCCCcceEEEcCCCCE
Confidence 5 999999999999998864321 12235899999999999999999999998 9999999999999999999
Q ss_pred EEeecCCceeecCCCc-cccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHc-CCCCCCCC
Q 002899 782 KISDFGLAKLYEEDKT-HISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNYR 846 (869)
Q Consensus 782 kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~ 846 (869)
||+|||+++....... .......+++.|+|||.+.+..++.++||||||+++|||++ |+.||...
T Consensus 177 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~ 243 (323)
T 3qup_A 177 CVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGI 243 (323)
T ss_dssp EECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred EEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCcccc
Confidence 9999999987644322 11223456789999999999999999999999999999999 99998653
No 132
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.6e-33 Score=311.83 Aligned_cols=195 Identities=29% Similarity=0.499 Sum_probs=169.9
Q ss_pred cCCCCCCeeeccCceEEEEEEE-cCCcEEEEEEecccCc---hhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEE
Q 002899 638 NNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSR---QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 713 (869)
Q Consensus 638 ~~f~~~~~IG~G~fG~Vyka~~-~~g~~VAvK~~~~~~~---~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 713 (869)
+.|+..+.||+|+||.||+|+. .+++.||||++..... ...+++.+|++++++++||||+++++++..++..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 4477889999999999999996 4789999999865432 23457899999999999999999999999999999999
Q ss_pred EeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeec
Q 002899 714 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 793 (869)
Q Consensus 714 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~ 793 (869)
||++ |+|.+.+.... ..+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||++....
T Consensus 134 e~~~-g~l~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 205 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHK----KPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMA 205 (348)
T ss_dssp ECCS-EEHHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTEEEECCCTTCBSSS
T ss_pred ecCC-CCHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEeeccCceecC
Confidence 9998 67877775432 26899999999999999999999998 9999999999999999999999999997654
Q ss_pred CCCccccccccccccccchhhcc---cCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 794 EDKTHISTRIAGTIGYMAPEYAM---RGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 794 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
.. ....||+.|+|||++. ...++.++|||||||++|||++|+.||..
T Consensus 206 ~~-----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~ 255 (348)
T 1u5q_A 206 PA-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN 255 (348)
T ss_dssp SB-----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred CC-----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 32 2346899999999984 56789999999999999999999999854
No 133
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.5e-33 Score=309.96 Aligned_cols=209 Identities=29% Similarity=0.445 Sum_probs=175.8
Q ss_pred HhcCCCCCCeeeccCceEEEEEEE------cCCcEEEEEEecccC-chhhHHHHHHHHHHHhc-CCCceeeEEeEEeeCc
Q 002899 636 ATNNFDPANKVGEGGFGSVYKGIL------SDGTVIAVKQLSSKS-RQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGN 707 (869)
Q Consensus 636 ~t~~f~~~~~IG~G~fG~Vyka~~------~~g~~VAvK~~~~~~-~~~~~~f~~E~~~l~~l-~H~nIv~l~~~~~~~~ 707 (869)
..++|++.+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|++++.++ +||||+++++++...+
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 356788999999999999999996 245689999997543 33456799999999999 8999999999999999
Q ss_pred eEEEEEEeccCCchhhhhhcCCcc------------------cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCC
Q 002899 708 QLLLVYEYMKNNCLSRAIFGKDTE------------------YRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIK 769 (869)
Q Consensus 708 ~~~lV~E~~~~gsL~~~l~~~~~~------------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk 769 (869)
..++||||+++|+|.+++...... ....+++..+..++.||++||+|||+.+ |+|||||
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dik 199 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLA 199 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT---EEETTCS
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCC
Confidence 999999999999999999765321 0124899999999999999999999998 9999999
Q ss_pred CCCEEEcCCCcEEEeecCCceeecCCCcc-ccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCC
Q 002899 770 TSNVLLDKDLNAKISDFGLAKLYEEDKTH-ISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNYRP 847 (869)
Q Consensus 770 ~~NILl~~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~~ 847 (869)
|+|||++.++.+||+|||++......... ......||+.|+|||++.+..++.++||||||+++|||++ |+.||....
T Consensus 200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 279 (344)
T 1rjb_A 200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 279 (344)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence 99999999999999999999876543322 2233567889999999998999999999999999999998 999996543
No 134
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.3e-33 Score=300.34 Aligned_cols=200 Identities=28% Similarity=0.485 Sum_probs=155.6
Q ss_pred cCCCCCCeeeccCceEEEEEEE-cCCcEEEEEEecccCc---hhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEE
Q 002899 638 NNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSR---QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 713 (869)
Q Consensus 638 ~~f~~~~~IG~G~fG~Vyka~~-~~g~~VAvK~~~~~~~---~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 713 (869)
++|++.+.||+|+||.||+|+. .+++.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (278)
T 3cok_A 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL 90 (278)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence 5688899999999999999997 4789999999865421 22467889999999999999999999999999999999
Q ss_pred EeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeec
Q 002899 714 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 793 (869)
Q Consensus 714 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~ 793 (869)
||+++++|.+++.... ..+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++....
T Consensus 91 e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 163 (278)
T 3cok_A 91 EMCHNGEMNRYLKNRV----KPFSENEARHFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLK 163 (278)
T ss_dssp ECCTTEEHHHHHHTCS----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSSCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred ecCCCCcHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEEeecceeecc
Confidence 9999999999987542 26899999999999999999999998 9999999999999999999999999998765
Q ss_pred CCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 794 EDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 794 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
..... .....||+.|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus 164 ~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 214 (278)
T 3cok_A 164 MPHEK-HYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDT 214 (278)
T ss_dssp -----------------------------CTHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCCCc-ceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 33221 2235689999999999988899999999999999999999999964
No 135
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.7e-33 Score=301.64 Aligned_cols=199 Identities=28% Similarity=0.479 Sum_probs=172.0
Q ss_pred HhcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccC---chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEE
Q 002899 636 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLL 711 (869)
Q Consensus 636 ~t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 711 (869)
+.++|++.+.||+|+||.||+|... +++.||||++.... ......+.+|++++++++||||+++++++.+.+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 3567889999999999999999976 56789999986532 2224678899999999999999999999999999999
Q ss_pred EEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCcee
Q 002899 712 VYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKL 791 (869)
Q Consensus 712 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~ 791 (869)
||||+++|+|.+.+.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++..
T Consensus 87 v~e~~~~~~l~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~Dfg~~~~ 158 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKLS-----KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVH 158 (279)
T ss_dssp EECCCTTEEHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHTTT---CEECCCCGGGEEECTTSCEEECSCCEESC
T ss_pred EEecCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHhEEEcCCCCEEEEecccccc
Confidence 999999999999886542 5899999999999999999999987 99999999999999999999999998865
Q ss_pred ecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 792 YEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 792 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
..... .....|++.|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus 159 ~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 209 (279)
T 3fdn_A 159 APSSR---RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 209 (279)
T ss_dssp C-----------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCC
T ss_pred CCccc---ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCC
Confidence 43322 2235689999999999999999999999999999999999999964
No 136
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.6e-33 Score=311.58 Aligned_cols=199 Identities=25% Similarity=0.400 Sum_probs=167.5
Q ss_pred hcCCCCCCeeeccCceEEEEEEEcCCcEEEEEEecccC--chhhHHHHHHHHHHHhcCC--CceeeEEeEEeeCceEEEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQH--PNLVKLYGCCVEGNQLLLV 712 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~--~~~~~~f~~E~~~l~~l~H--~nIv~l~~~~~~~~~~~lV 712 (869)
.++|++.+.||+|+||.||+|...+++.||||++.... ....+.+.+|++++.+++| |||+++++++..++..++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 45688999999999999999998889999999986542 3345678999999999987 9999999999999999999
Q ss_pred EEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceee
Q 002899 713 YEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 792 (869)
Q Consensus 713 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~ 792 (869)
|| +.+++|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++ ++.+||+|||+++..
T Consensus 88 ~e-~~~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~al~~lH~~~---iiHrDikp~NIll~-~~~~kl~DFG~a~~~ 157 (343)
T 3dbq_A 88 ME-CGNIDLNSWLKKKK-----SIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQM 157 (343)
T ss_dssp EC-CCSEEHHHHHHHSC-----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEE-TTEEEECCCSSSCCC
T ss_pred Ee-CCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEE-CCcEEEeeccccccc
Confidence 99 56789999997643 6899999999999999999999998 99999999999997 678999999999876
Q ss_pred cCCCcc-ccccccccccccchhhccc-----------CCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 793 EEDKTH-ISTRIAGTIGYMAPEYAMR-----------GYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 793 ~~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
...... ......||+.|+|||++.. ..++.++|||||||++|||++|+.||..
T Consensus 158 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 222 (343)
T 3dbq_A 158 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 222 (343)
T ss_dssp ------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred CcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchh
Confidence 543322 2234579999999999864 6789999999999999999999999964
No 137
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.8e-33 Score=306.41 Aligned_cols=201 Identities=25% Similarity=0.317 Sum_probs=165.9
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCc---hhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR---QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLV 712 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~---~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 712 (869)
-++|++.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|++++++++||||+++++++..++..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 468899999999999999999975 688999999875432 2246788999999999999999999999999999999
Q ss_pred EEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceee
Q 002899 713 YEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 792 (869)
Q Consensus 713 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~ 792 (869)
|||+++++|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||++...
T Consensus 113 ~e~~~~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 184 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQG-----PLAPPRAVAIVRQIGSALDAAHAAG---ATHRDVKPENILVSADDFAYLVDFGIASAT 184 (309)
T ss_dssp EECCCCEEHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSCCC----
T ss_pred EEecCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCc---CCcCCCChHHEEEcCCCCEEEecCccCccc
Confidence 99999999999986542 6899999999999999999999998 999999999999999999999999999876
Q ss_pred cCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 793 EEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 793 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
............|++.|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus 185 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 237 (309)
T 2h34_A 185 TDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQG 237 (309)
T ss_dssp ------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCS
T ss_pred cccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCC
Confidence 54333333345689999999999988999999999999999999999999964
No 138
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=5.3e-33 Score=298.26 Aligned_cols=199 Identities=26% Similarity=0.384 Sum_probs=172.9
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCc------hhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR------QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQL 709 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~------~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 709 (869)
.++|++.+.||+|+||.||+|... +++.||+|.++.... ...+.+.+|++++++++||||+++++++.+.+..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 356888999999999999999986 689999999865422 1356789999999999999999999999999999
Q ss_pred EEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCC----cEEEee
Q 002899 710 LLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDL----NAKISD 785 (869)
Q Consensus 710 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~----~~kl~D 785 (869)
++||||+++++|.+++.... .+++..+..++.|+++||+|||+.+ ++||||||+||+++.++ .+||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~~~~kl~d 155 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAEKE-----SLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLID 155 (283)
T ss_dssp EEEEECCCSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSSSSCCEEECC
T ss_pred EEEEeecCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChHHEEEecCCCCCCceEEEe
Confidence 99999999999999986532 6899999999999999999999998 99999999999998877 899999
Q ss_pred cCCceeecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 786 FGLAKLYEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 786 FGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
||++........ .....|++.|+|||++....++.++||||||+++|||++|+.||..
T Consensus 156 fg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 213 (283)
T 3bhy_A 156 FGIAHKIEAGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 213 (283)
T ss_dssp CTTCEECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred cccceeccCCCc--ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCC
Confidence 999987654322 2235689999999999988999999999999999999999999965
No 139
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=6e-33 Score=335.60 Aligned_cols=314 Identities=18% Similarity=0.222 Sum_probs=251.7
Q ss_pred ceEEEEeccCCCccccCCccccCCCCCCEEEeecCcCCC--CCchhhccc---cceEEEeecccCCCCCchhhcCccccc
Q 002899 54 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTG--SFSPQWASL---QLVELSVMGNRLSGPFPKVLTNITTLK 128 (869)
Q Consensus 54 ~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~--~~~~~~~~l---~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 128 (869)
.+++.|++++|.+++..+..|.++++|++|+|++|.+.. .....|..+ +|+.|+|++|+++++.|..|..+++|+
T Consensus 329 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 408 (680)
T 1ziw_A 329 KCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLE 408 (680)
T ss_dssp TTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred CCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCC
Confidence 467888888888888888888888999999998887543 333344433 789999999999999899999999999
Q ss_pred cccccccccCCCCC-ccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCC--CCCccccCCCCcccEEEcc
Q 002899 129 NLSIEGNLFTGSIP-PDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFS--GKIPEFIGKWKKIQKLHIQ 205 (869)
Q Consensus 129 ~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~~~~~~~l~~L~~L~L~ 205 (869)
.|+|++|.+++.+| ..|.++++|++|+|++|++.+..+..|..+++|+.|++++|.++ +..|..|..+++|+.|+|+
T Consensus 409 ~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls 488 (680)
T 1ziw_A 409 VLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLS 488 (680)
T ss_dssp EEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECC
T ss_pred EEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECC
Confidence 99999999987665 68899999999999999999888889999999999999999987 5688999999999999999
Q ss_pred CCcCCCCchHhhhcCCCCCEEEcCCCCCCCCccc---------ccccccceEEEcccccCccCCCcccCCCCCcCEEecc
Q 002899 206 GSSLEGPIPASISALTSLTDLRISDLKGSESAFP---------KLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLS 276 (869)
Q Consensus 206 ~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~---------~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls 276 (869)
+|++++..+..|..+++|+.|+|++|+++..... .....+|+.|+|++|+|+...+..|.++++|+.|+|+
T Consensus 489 ~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls 568 (680)
T 1ziw_A 489 NNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLG 568 (680)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECC
Confidence 9999988888999999999999999998765322 1223489999999999997777789999999999999
Q ss_pred CCCCCCCCchhhhcCCCCCEEEeeCCcCCCCCchhh---hccCCceeeeccCccCCCCCCCCCCCCC-ccceeccCCCCC
Q 002899 277 FNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYI---FNSNKNVDISLNNFTWESSDPIECPRGS-VNLVESYSSPRN 352 (869)
Q Consensus 277 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~---~~~l~~l~ls~N~~~~~~~~p~~C~c~~-~~~~~~l~~~~~ 352 (869)
+|+|++..+..|..+++|+.|+|++|+|++..|..+ +..++.+++++| ||.|+|+. .||..|+.....
T Consensus 569 ~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N--------~~~c~c~~~~~~~~~~~~~~~ 640 (680)
T 1ziw_A 569 LNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFN--------PFDCTCESIAWFVNWINETHT 640 (680)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTC--------CCCBCCCCCSSEECCSSCC--
T ss_pred CCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCC--------CcccCCccHHHHHHHHHhcCc
Confidence 999998888889999999999999999998877754 578999999999 99999996 999999876544
Q ss_pred CCCCCcCccCCCCCCCCCcccccceee
Q 002899 353 KLDKVHPCLRQNFPCSAPADQYHYTLH 379 (869)
Q Consensus 353 ~~~~~~~~~~~~~~C~~p~~~~~~~~~ 379 (869)
.... ......|+.|+..+|+.+.
T Consensus 641 ~~~~----~~~~~~C~~p~~~~g~~l~ 663 (680)
T 1ziw_A 641 NIPE----LSSHYLCNTPPHYHGFPVR 663 (680)
T ss_dssp ---------------------------
T ss_pred cccc----ccCCcEECCchHHCCCccc
Confidence 3321 1245689999988887665
No 140
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=2.4e-33 Score=301.66 Aligned_cols=202 Identities=28% Similarity=0.400 Sum_probs=170.0
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccC-chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 714 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 714 (869)
.++|.+.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 100 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME 100 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence 356889999999999999999975 68899999986553 3345788999999999999999999999999999999999
Q ss_pred eccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEE---cCCCcEEEeecCCcee
Q 002899 715 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLL---DKDLNAKISDFGLAKL 791 (869)
Q Consensus 715 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl---~~~~~~kl~DFGla~~ 791 (869)
|+++|+|.+.+.... .....+++..+..++.|+++||+|||+.+ |+||||||+|||+ +.++.+||+|||++..
T Consensus 101 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~ 176 (285)
T 3is5_A 101 TCEGGELLERIVSAQ-ARGKALSEGYVAELMKQMMNALAYFHSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAEL 176 (285)
T ss_dssp CCSCCBHHHHHHHHH-HHTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC
T ss_pred eCCCCcHHHHHHhhh-hcccCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCCCHHHEEEecCCCCCCEEEEeeeccee
Confidence 999999999885432 11236899999999999999999999998 9999999999999 4568899999999987
Q ss_pred ecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 792 YEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 792 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
...... .....||+.|+|||++. ..++.++||||||+++|||++|+.||..
T Consensus 177 ~~~~~~--~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~ 227 (285)
T 3is5_A 177 FKSDEH--STNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTG 227 (285)
T ss_dssp ------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cCCccc--CcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCC
Confidence 654322 23456899999999886 5689999999999999999999999964
No 141
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=6e-33 Score=299.75 Aligned_cols=200 Identities=26% Similarity=0.395 Sum_probs=176.2
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccC---chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLV 712 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 712 (869)
.++|.+.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 356888999999999999999976 57899999986542 23456788999999999999999999999999999999
Q ss_pred EEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceee
Q 002899 713 YEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 792 (869)
Q Consensus 713 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~ 792 (869)
|||+++++|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 94 ~e~~~~~~L~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 165 (294)
T 2rku_A 94 LELCRRRSLLELHKRRK-----ALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKV 165 (294)
T ss_dssp EECCTTCBHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EecCCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEcCCCCEEEEeccCceec
Confidence 99999999999875432 6899999999999999999999998 999999999999999999999999999876
Q ss_pred cCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 793 EEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 793 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
..... ......||+.|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus 166 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~ 217 (294)
T 2rku_A 166 EYDGE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 217 (294)
T ss_dssp CSTTC-CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred ccCcc-ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 53322 22335689999999999988899999999999999999999999965
No 142
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=2.9e-33 Score=307.31 Aligned_cols=217 Identities=23% Similarity=0.351 Sum_probs=179.0
Q ss_pred ccccCCcccHHHHHHHhcCCCCC-CeeeccCceEEEEEEEc-CCcEEEEEEecccC--chhhHHHHHHHHHHHhc-CCCc
Q 002899 621 LDLQTGLYTLRQIKAATNNFDPA-NKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS--RQGNREFVNEIGMISAQ-QHPN 695 (869)
Q Consensus 621 ~~~~~~~~~~~~i~~~t~~f~~~-~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~--~~~~~~f~~E~~~l~~l-~H~n 695 (869)
.+...+-..++..+...+.|.+. +.||+|+||.||+|... +++.||+|++.... .....++.+|++++..+ +|||
T Consensus 11 ~~~~~~n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~ 90 (327)
T 3lm5_A 11 VDLGTENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPR 90 (327)
T ss_dssp -----CCCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTT
T ss_pred ccccchhhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCC
Confidence 33344444555566777788887 88999999999999976 68999999987543 23357889999999998 5699
Q ss_pred eeeEEeEEeeCceEEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEE
Q 002899 696 LVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLL 775 (869)
Q Consensus 696 Iv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl 775 (869)
|+++++++...+..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+++ |+||||||+|||+
T Consensus 91 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~i~~ql~~~L~~LH~~g---ivH~Dikp~NIl~ 164 (327)
T 3lm5_A 91 VINLHEVYENTSEIILILEYAAGGEIFSLCLPEL---AEMVSENDVIRLIKQILEGVYYLHQNN---IVHLDLKPQNILL 164 (327)
T ss_dssp BCCEEEEEECSSEEEEEEECCTTEEGGGGGSSCC----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEE
T ss_pred EEEEEEEEEeCCeEEEEEEecCCCcHHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCChHHEEE
Confidence 9999999999999999999999999999885432 236899999999999999999999998 9999999999999
Q ss_pred cC---CCcEEEeecCCceeecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 776 DK---DLNAKISDFGLAKLYEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 776 ~~---~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
+. ++.+||+|||++........ .....||+.|+|||++....++.++||||||+++|||++|+.||..
T Consensus 165 ~~~~~~~~~kL~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~ 235 (327)
T 3lm5_A 165 SSIYPLGDIKIVDFGMSRKIGHACE--LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVG 235 (327)
T ss_dssp SCBTTBCCEEECCGGGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ecCCCCCcEEEeeCccccccCCccc--cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 87 78999999999987654322 2335789999999999999999999999999999999999999954
No 143
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=2.7e-33 Score=305.00 Aligned_cols=208 Identities=28% Similarity=0.439 Sum_probs=178.1
Q ss_pred HhcCCCCCCeeeccCceEEEEEEE------cCCcEEEEEEecccCc-hhhHHHHHHHHHHHhc-CCCceeeEEeEEeeCc
Q 002899 636 ATNNFDPANKVGEGGFGSVYKGIL------SDGTVIAVKQLSSKSR-QGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGN 707 (869)
Q Consensus 636 ~t~~f~~~~~IG~G~fG~Vyka~~------~~g~~VAvK~~~~~~~-~~~~~f~~E~~~l~~l-~H~nIv~l~~~~~~~~ 707 (869)
..++|.+.+.||+|+||.||+|.. .+++.||||+++.... ...+.+.+|+++++++ +||||+++++++..++
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 100 (313)
T 1t46_A 21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 100 (313)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence 346788899999999999999985 2467899999976543 3456789999999999 9999999999999999
Q ss_pred eEEEEEEeccCCchhhhhhcCCcc-------------cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEE
Q 002899 708 QLLLVYEYMKNNCLSRAIFGKDTE-------------YRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVL 774 (869)
Q Consensus 708 ~~~lV~E~~~~gsL~~~l~~~~~~-------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NIL 774 (869)
..++||||+++|+|.+++...... ....+++..+..++.|+++||+|||+.+ |+||||||+||+
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil 177 (313)
T 1t46_A 101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNIL 177 (313)
T ss_dssp SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEE
T ss_pred CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEE
Confidence 999999999999999998765321 1225899999999999999999999998 999999999999
Q ss_pred EcCCCcEEEeecCCceeecCCCcc-ccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHc-CCCCCCCC
Q 002899 775 LDKDLNAKISDFGLAKLYEEDKTH-ISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNYR 846 (869)
Q Consensus 775 l~~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~ 846 (869)
++.++.+||+|||++......... ......+|+.|+|||++....++.++||||||+++|||++ |+.||...
T Consensus 178 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 251 (313)
T 1t46_A 178 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM 251 (313)
T ss_dssp EETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred EcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcc
Confidence 999999999999999876544322 2223457889999999999999999999999999999999 99998654
No 144
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=5.5e-33 Score=296.88 Aligned_cols=203 Identities=31% Similarity=0.477 Sum_probs=176.3
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccC-chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 714 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 714 (869)
.++|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|+++++.++||||+++++++.+++..++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 467889999999999999999976 68999999986543 3345678999999999999999999999999999999999
Q ss_pred eccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeecC
Q 002899 715 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEE 794 (869)
Q Consensus 715 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~~ 794 (869)
|+++++|.+++.... .+++..+..++.|+++||+|||+.+ ++||||||+||+++.++.+||+|||++.....
T Consensus 86 ~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 157 (276)
T 2yex_A 86 YCSGGELFDRIEPDI-----GMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRY 157 (276)
T ss_dssp CCTTEEGGGGSBTTT-----BCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEE
T ss_pred ecCCCcHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCChHHEEEccCCCEEEeeCCCccccCC
Confidence 999999999885432 5899999999999999999999998 99999999999999999999999999987643
Q ss_pred CCc-cccccccccccccchhhcccCCC-CchhHHHHHHHHHHHHHcCCCCCCCCC
Q 002899 795 DKT-HISTRIAGTIGYMAPEYAMRGYL-TSKADVYSFGVVTLEIVSGKSNTNYRP 847 (869)
Q Consensus 795 ~~~-~~~~~~~gt~~y~aPE~~~~~~~-~~k~DvwSlGvil~elltG~~p~~~~~ 847 (869)
... .......|++.|+|||++.+..+ +.++||||||+++|||++|+.||....
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 212 (276)
T 2yex_A 158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 212 (276)
T ss_dssp TTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSC
T ss_pred CcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCc
Confidence 322 12234578999999999987654 789999999999999999999997543
No 145
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=5.3e-33 Score=308.31 Aligned_cols=201 Identities=25% Similarity=0.420 Sum_probs=170.4
Q ss_pred cCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCc--hhhHHHHHHHHHHHhcCCCceeeEEeEEee--------C
Q 002899 638 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR--QGNREFVNEIGMISAQQHPNLVKLYGCCVE--------G 706 (869)
Q Consensus 638 ~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~--~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~--------~ 706 (869)
++|++.+.||+|+||.||+|+.. +++.||||++..... .....+.+|+++++.++||||+++++++.. .
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 57889999999999999999974 789999999865432 234578899999999999999999999987 4
Q ss_pred ceEEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeec
Q 002899 707 NQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDF 786 (869)
Q Consensus 707 ~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DF 786 (869)
+..++||||+++ +|.+.+.... ..+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+||
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~kl~Df 168 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSNVL----VKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADF 168 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHCTT----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCC
T ss_pred ceEEEEEeccCC-CHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCCEEEccc
Confidence 468999999985 6777665442 25899999999999999999999998 999999999999999999999999
Q ss_pred CCceeecCCCc---cccccccccccccchhhccc-CCCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 002899 787 GLAKLYEEDKT---HISTRIAGTIGYMAPEYAMR-GYLTSKADVYSFGVVTLEIVSGKSNTNYR 846 (869)
Q Consensus 787 Gla~~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~ 846 (869)
|+++....... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 169 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 232 (351)
T 3mi9_A 169 GLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN 232 (351)
T ss_dssp TTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred hhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCC
Confidence 99987653221 12234568999999998875 46899999999999999999999999753
No 146
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=4.1e-33 Score=307.02 Aligned_cols=208 Identities=27% Similarity=0.439 Sum_probs=176.5
Q ss_pred HhcCCCCCCeeeccCceEEEEEEEc--------CCcEEEEEEecccC-chhhHHHHHHHHHHHhc-CCCceeeEEeEEee
Q 002899 636 ATNNFDPANKVGEGGFGSVYKGILS--------DGTVIAVKQLSSKS-RQGNREFVNEIGMISAQ-QHPNLVKLYGCCVE 705 (869)
Q Consensus 636 ~t~~f~~~~~IG~G~fG~Vyka~~~--------~g~~VAvK~~~~~~-~~~~~~f~~E~~~l~~l-~H~nIv~l~~~~~~ 705 (869)
..++|.+.+.||+|+||.||+|... +++.||||++.... ....+++.+|+++++++ +||||+++++++..
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 3567889999999999999999863 46789999997653 33456789999999999 99999999999999
Q ss_pred CceEEEEEEeccCCchhhhhhcCCcc-----------cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEE
Q 002899 706 GNQLLLVYEYMKNNCLSRAIFGKDTE-----------YRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVL 774 (869)
Q Consensus 706 ~~~~~lV~E~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NIL 774 (869)
.+..++||||+++|+|.+++...... ....+++..+..++.||++||+|||+.+ |+||||||+|||
T Consensus 113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIl 189 (334)
T 2pvf_A 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVL 189 (334)
T ss_dssp SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEE
T ss_pred CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCccceEE
Confidence 99999999999999999999765321 1124899999999999999999999998 999999999999
Q ss_pred EcCCCcEEEeecCCceeecCCCcc-ccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHc-CCCCCCCC
Q 002899 775 LDKDLNAKISDFGLAKLYEEDKTH-ISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNYR 846 (869)
Q Consensus 775 l~~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~ 846 (869)
++.++.+||+|||++......... ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||...
T Consensus 190 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 263 (334)
T 2pvf_A 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 263 (334)
T ss_dssp ECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred EcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcC
Confidence 999999999999999876543321 1223456789999999998889999999999999999999 99999653
No 147
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=6.1e-33 Score=305.80 Aligned_cols=200 Identities=26% Similarity=0.395 Sum_probs=176.3
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccC---chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLV 712 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 712 (869)
.++|.+.+.||+|+||.||++... +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 356888999999999999999976 57899999986542 23456788999999999999999999999999999999
Q ss_pred EEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceee
Q 002899 713 YEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 792 (869)
Q Consensus 713 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~ 792 (869)
|||+++++|.+++.... .+++..+..++.|+++||+|||+++ |+||||||+|||++.++.+||+|||++...
T Consensus 120 ~e~~~~~~L~~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 191 (335)
T 2owb_A 120 LELCRRRSLLELHKRRK-----ALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKV 191 (335)
T ss_dssp ECCCTTCBHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EecCCCCCHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHCC---CEecCCCchhEEEcCCCCEEEeeccCceec
Confidence 99999999999885432 6899999999999999999999998 999999999999999999999999999876
Q ss_pred cCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 793 EEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 793 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
..... ......||+.|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus 192 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 243 (335)
T 2owb_A 192 EYDGE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 243 (335)
T ss_dssp CSTTC-CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred ccCcc-cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCC
Confidence 53322 22345689999999999988899999999999999999999999965
No 148
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=3.2e-33 Score=299.84 Aligned_cols=202 Identities=27% Similarity=0.401 Sum_probs=170.0
Q ss_pred hcCCCCCCeeeccCceEEEEEEEcC----CcEEEEEEecccC-chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILSD----GTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLL 711 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~~----g~~VAvK~~~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 711 (869)
.++|.+.+.||+|+||.||+|...+ +..||+|.+.... ....+.|.+|++++++++||||+++++++.+ +..++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEE
Confidence 4678889999999999999998643 3469999987653 3446779999999999999999999999865 45789
Q ss_pred EEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCcee
Q 002899 712 VYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKL 791 (869)
Q Consensus 712 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~ 791 (869)
||||+++++|.+++.... ..+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++..
T Consensus 90 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 162 (281)
T 3cc6_A 90 IMELYPYGELGHYLERNK----NSLKVLTLVLYSLQICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRY 162 (281)
T ss_dssp EEECCTTCBHHHHHHHHT----TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEEETTEEEECCCCGGGC
T ss_pred EEecCCCCCHHHHHHhcc----ccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEECCCCcEEeCccCCCcc
Confidence 999999999999986532 25899999999999999999999998 99999999999999999999999999987
Q ss_pred ecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHc-CCCCCCCC
Q 002899 792 YEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNYR 846 (869)
Q Consensus 792 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~ 846 (869)
.............+++.|+|||++....++.++||||||+++|||++ |+.||...
T Consensus 163 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~ 218 (281)
T 3cc6_A 163 IEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWL 218 (281)
T ss_dssp C---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred cccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccC
Confidence 65433322333457889999999998899999999999999999998 99999643
No 149
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=2.7e-33 Score=318.12 Aligned_cols=200 Identities=26% Similarity=0.414 Sum_probs=163.9
Q ss_pred HHhcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccC--------chhhHHHHHHHHHHHhcCCCceeeEEeEEee
Q 002899 635 AATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS--------RQGNREFVNEIGMISAQQHPNLVKLYGCCVE 705 (869)
Q Consensus 635 ~~t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~--------~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~ 705 (869)
...++|.+.+.||+|+||.||+|... +++.||||++.... ......+.+|++++++++||||+++++++.
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~- 210 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD- 210 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence 45688999999999999999999975 57899999986532 112335889999999999999999999975
Q ss_pred CceEEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCC---CcEE
Q 002899 706 GNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKD---LNAK 782 (869)
Q Consensus 706 ~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~---~~~k 782 (869)
.+..++||||+++|+|.+++.... .+++..+..++.|+++||+|||+++ |+||||||+|||++.+ ..+|
T Consensus 211 ~~~~~lv~e~~~~g~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~~~~k 282 (419)
T 3i6u_A 211 AEDYYIVLELMEGGELFDKVVGNK-----RLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIK 282 (419)
T ss_dssp SSEEEEEEECCTTCBGGGGTSSSC-----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSSSCCEE
T ss_pred cCceEEEEEcCCCCcHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCCCcceEE
Confidence 456899999999999999886543 6899999999999999999999998 9999999999999754 4599
Q ss_pred EeecCCceeecCCCccccccccccccccchhhcc---cCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 783 ISDFGLAKLYEEDKTHISTRIAGTIGYMAPEYAM---RGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 783 l~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
|+|||+++...... ......||+.|+|||++. ...++.++|||||||++|||++|+.||..
T Consensus 283 l~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~ 346 (419)
T 3i6u_A 283 ITDFGHSKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 346 (419)
T ss_dssp ECCSSTTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred EeecccceecCCCc--cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence 99999998765322 223467999999999985 35788899999999999999999999965
No 150
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=4.9e-33 Score=317.38 Aligned_cols=198 Identities=25% Similarity=0.393 Sum_probs=166.9
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEeccc--CchhhHHHHHHHHHHHhcCCCceeeEEeEEeeC-----ce
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSK--SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEG-----NQ 708 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~-----~~ 708 (869)
.++|.+.+.||+|+||.||+|... +++.||||++... .....+++.+|+++++.++||||+++++++... +.
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 568899999999999999999975 5789999999754 233457889999999999999999999999876 57
Q ss_pred EEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCC
Q 002899 709 LLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGL 788 (869)
Q Consensus 709 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGl 788 (869)
.|+||||++ |+|.+++.... .+++..+..++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~~-----~l~~~~~~~i~~qil~aL~~LH~~g---ivHrDlkp~NILl~~~~~~kL~DFGl 175 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTPI-----FLTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGL 175 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSSC-----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEEecCC-cCHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHeEECCCCCEEEccCCC
Confidence 899999987 59999886542 5899999999999999999999998 99999999999999999999999999
Q ss_pred ceeecCCCcc---------------------ccccccccccccchhhc-ccCCCCchhHHHHHHHHHHHHHcCCCCC
Q 002899 789 AKLYEEDKTH---------------------ISTRIAGTIGYMAPEYA-MRGYLTSKADVYSFGVVTLEIVSGKSNT 843 (869)
Q Consensus 789 a~~~~~~~~~---------------------~~~~~~gt~~y~aPE~~-~~~~~~~k~DvwSlGvil~elltG~~p~ 843 (869)
++........ .....+||+.|+|||++ ....++.++||||+||++|||++|..|+
T Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~ 252 (432)
T 3n9x_A 176 ARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH 252 (432)
T ss_dssp CEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred cccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence 9876543211 12446789999999986 5567999999999999999999865544
No 151
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.3e-33 Score=298.08 Aligned_cols=201 Identities=30% Similarity=0.483 Sum_probs=172.1
Q ss_pred cCCCCCC-eeeccCceEEEEEEEc---CCcEEEEEEecccC-chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEE
Q 002899 638 NNFDPAN-KVGEGGFGSVYKGILS---DGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLV 712 (869)
Q Consensus 638 ~~f~~~~-~IG~G~fG~Vyka~~~---~g~~VAvK~~~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 712 (869)
++|.+.+ .||+|+||.||+|... +++.||||+++... ....+++.+|++++++++||||+++++++ ..+..++|
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv 87 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV 87 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence 4455555 8999999999999864 57889999997653 34467799999999999999999999999 55678999
Q ss_pred EEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceee
Q 002899 713 YEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 792 (869)
Q Consensus 713 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~ 792 (869)
|||+++++|.+++.... ..+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 88 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~ 160 (287)
T 1u59_A 88 MEMAGGGPLHKFLVGKR----EEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKAL 160 (287)
T ss_dssp EECCTTEEHHHHHTTCT----TTSCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEeCCCCCHHHHHHhCC----ccCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCchheEEEcCCCCEEECcccceeee
Confidence 99999999999986442 25899999999999999999999998 999999999999999999999999999877
Q ss_pred cCCCccc--cccccccccccchhhcccCCCCchhHHHHHHHHHHHHHc-CCCCCCCC
Q 002899 793 EEDKTHI--STRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNYR 846 (869)
Q Consensus 793 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~ 846 (869)
....... .....+|+.|+|||++....++.++||||||+++|||++ |+.||...
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 217 (287)
T 1u59_A 161 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM 217 (287)
T ss_dssp TTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred ccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccC
Confidence 5433221 122346889999999998889999999999999999998 99999653
No 152
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=2.3e-33 Score=302.00 Aligned_cols=195 Identities=25% Similarity=0.433 Sum_probs=170.7
Q ss_pred hcCCCCCCeeeccCceEEEEEEEcC-C-------cEEEEEEecccCchhhHHHHHHHHHHHhcCCCceeeEEeEEeeCce
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILSD-G-------TVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQ 708 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~~-g-------~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~ 708 (869)
.++|.+.+.||+|+||.||+|.... + +.||+|++........+.+.+|++++++++||||+++++++.+++.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 3568889999999999999998653 3 4799999977666667889999999999999999999999999999
Q ss_pred EEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCc--------
Q 002899 709 LLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLN-------- 780 (869)
Q Consensus 709 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~-------- 780 (869)
.++||||+++|+|.+++.... ..+++..+..++.|+++||+|||+++ |+||||||+|||++.++.
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~ 159 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKNK----NCINILWKLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPF 159 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHTG----GGCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEEECCBGGGTBCCE
T ss_pred CEEEEECCCCCCHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHhhCC---eECCCcCcceEEEecCCcccccccce
Confidence 999999999999999997643 24899999999999999999999998 999999999999998887
Q ss_pred EEEeecCCceeecCCCccccccccccccccchhhccc-CCCCchhHHHHHHHHHHHHHcCCCCC
Q 002899 781 AKISDFGLAKLYEEDKTHISTRIAGTIGYMAPEYAMR-GYLTSKADVYSFGVVTLEIVSGKSNT 843 (869)
Q Consensus 781 ~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DvwSlGvil~elltG~~p~ 843 (869)
+||+|||++...... ....||+.|+|||++.+ ..++.++||||||+++|||++|+.|+
T Consensus 160 ~kl~Dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~ 218 (289)
T 4fvq_A 160 IKLSDPGISITVLPK-----DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKP 218 (289)
T ss_dssp EEECCCCSCTTTSCH-----HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred eeeccCcccccccCc-----cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCC
Confidence 999999998654321 22457889999999987 67999999999999999999965554
No 153
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=3.1e-33 Score=321.75 Aligned_cols=193 Identities=24% Similarity=0.404 Sum_probs=154.0
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEeccc--CchhhHHHHHHHHHHHhcCCCceeeEEeEEeeC-----ce
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSK--SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEG-----NQ 708 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~-----~~ 708 (869)
.++|++.++||+|+||.||+|... +++.||||++... .....+++.+|+++++.++|||||++++++... ..
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 467999999999999999999965 6899999998654 233457789999999999999999999998543 56
Q ss_pred EEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCC
Q 002899 709 LLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGL 788 (869)
Q Consensus 709 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGl 788 (869)
.|+||||++ |+|.+++.... .+++..+..++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 132 ~~lv~e~~~-~~L~~~~~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~~---iiHrDlKp~NILl~~~~~~kl~DFGl 202 (458)
T 3rp9_A 132 LYVVLEIAD-SDFKKLFRTPV-----YLTELHIKTLLYNLLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGL 202 (458)
T ss_dssp EEEEECCCS-EEHHHHHHSSC-----CCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEEeccc-cchhhhcccCC-----CCCHHHHHHHHHHHHHHHHHHHhCC---cCCCCCChhhEEECCCCCEeeccccc
Confidence 899999885 68988886542 6899999999999999999999998 99999999999999999999999999
Q ss_pred ceeecCCCc--------------------------cccccccccccccchhhc-ccCCCCchhHHHHHHHHHHHHHc
Q 002899 789 AKLYEEDKT--------------------------HISTRIAGTIGYMAPEYA-MRGYLTSKADVYSFGVVTLEIVS 838 (869)
Q Consensus 789 a~~~~~~~~--------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~k~DvwSlGvil~ellt 838 (869)
++....... ......+||+.|+|||++ ....++.++|||||||++|||++
T Consensus 203 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~ellt 279 (458)
T 3rp9_A 203 ARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279 (458)
T ss_dssp CBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHT
T ss_pred chhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHH
Confidence 987643211 112335789999999976 46679999999999999999999
No 154
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=8.2e-33 Score=308.42 Aligned_cols=207 Identities=24% Similarity=0.419 Sum_probs=178.6
Q ss_pred cHHHHHHHhcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCc--------hhhHHHHHHHHHHHhc-CCCceee
Q 002899 629 TLRQIKAATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR--------QGNREFVNEIGMISAQ-QHPNLVK 698 (869)
Q Consensus 629 ~~~~i~~~t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~--------~~~~~f~~E~~~l~~l-~H~nIv~ 698 (869)
.........++|++.+.||+|+||.||+|... +|+.||||++..... ...+.+.+|++++.++ +||||++
T Consensus 85 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~ 164 (365)
T 2y7j_A 85 DWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIIT 164 (365)
T ss_dssp HHHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCC
T ss_pred cchhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 34445566778999999999999999999986 789999999865431 1134678899999998 8999999
Q ss_pred EEeEEeeCceEEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCC
Q 002899 699 LYGCCVEGNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKD 778 (869)
Q Consensus 699 l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~ 778 (869)
+++++...+..++||||+++++|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.+
T Consensus 165 ~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~~LH~~g---i~H~Dlkp~NIl~~~~ 236 (365)
T 2y7j_A 165 LIDSYESSSFMFLVFDLMRKGELFDYLTEK-----VALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDN 236 (365)
T ss_dssp EEEEEEBSSEEEEEECCCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTT
T ss_pred EEEEEeeCCEEEEEEEeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCC
Confidence 999999999999999999999999998643 26899999999999999999999998 9999999999999999
Q ss_pred CcEEEeecCCceeecCCCccccccccccccccchhhccc------CCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 779 LNAKISDFGLAKLYEEDKTHISTRIAGTIGYMAPEYAMR------GYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 779 ~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
+.+||+|||++........ .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 237 ~~ikl~DfG~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~ 307 (365)
T 2y7j_A 237 MQIRLSDFGFSCHLEPGEK--LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWH 307 (365)
T ss_dssp CCEEECCCTTCEECCTTCC--BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCEEEEecCcccccCCCcc--cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCC
Confidence 9999999999987654322 234579999999999863 3578899999999999999999999964
No 155
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=3.5e-33 Score=314.16 Aligned_cols=198 Identities=25% Similarity=0.398 Sum_probs=167.9
Q ss_pred cCCCCCCeeeccCceEEEEEEEcCCcEEEEEEecccC--chhhHHHHHHHHHHHhcC--CCceeeEEeEEeeCceEEEEE
Q 002899 638 NNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQ--HPNLVKLYGCCVEGNQLLLVY 713 (869)
Q Consensus 638 ~~f~~~~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~--~~~~~~f~~E~~~l~~l~--H~nIv~l~~~~~~~~~~~lV~ 713 (869)
++|++.+.||+|+||.||+|...+++.||||++.... ......+.+|++++.+++ ||||+++++++..++..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 4588999999999999999998889999999986542 334577899999999996 599999999999999999999
Q ss_pred EeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeec
Q 002899 714 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 793 (869)
Q Consensus 714 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~ 793 (869)
| +.+++|.+++.... .+++..+..++.||++||+|||+.+ |+||||||+|||++ ++.+||+|||+++.+.
T Consensus 136 E-~~~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~ 205 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKK-----SIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 205 (390)
T ss_dssp E-CCSEEHHHHHHHCS-----SCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCCGGGEEES-SSCEEECCCSSSCCC-
T ss_pred e-cCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEEE-CCeEEEEecCcccccc
Confidence 9 67889999987643 6789999999999999999999997 99999999999995 5899999999998765
Q ss_pred CCCcc-ccccccccccccchhhccc-----------CCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 794 EDKTH-ISTRIAGTIGYMAPEYAMR-----------GYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 794 ~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
..... ......||+.|+|||++.. ..++.++|||||||++|||++|+.||..
T Consensus 206 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 269 (390)
T 2zmd_A 206 PDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 269 (390)
T ss_dssp --------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred CCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchh
Confidence 43322 2234579999999999865 3689999999999999999999999964
No 156
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=6e-33 Score=298.21 Aligned_cols=198 Identities=25% Similarity=0.440 Sum_probs=175.0
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccC---chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLV 712 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 712 (869)
.++|++.+.||+|+||.||+|... +++.||+|++.... ......+.+|++++++++||||+++++++.+.+..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 357889999999999999999976 57889999986532 22246788999999999999999999999999999999
Q ss_pred EEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceee
Q 002899 713 YEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 792 (869)
Q Consensus 713 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~ 792 (869)
|||+++|+|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 93 ~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~ 164 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHG-----RFDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHA 164 (284)
T ss_dssp ECCCTTEEHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEeCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEEcCCCCEEEecccccccC
Confidence 99999999999886542 5899999999999999999999997 999999999999999999999999998765
Q ss_pred cCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 793 EEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 793 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
.... .....|++.|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus 165 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 214 (284)
T 2vgo_A 165 PSLR---RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS 214 (284)
T ss_dssp SSSC---BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCC
T ss_pred cccc---cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCC
Confidence 4322 2235689999999999998899999999999999999999999964
No 157
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=2e-33 Score=312.84 Aligned_cols=199 Identities=24% Similarity=0.442 Sum_probs=175.1
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccC-chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 714 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 714 (869)
.++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++..++..++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 357889999999999999999976 68999999987653 3345678999999999999999999999999999999999
Q ss_pred eccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhc-CCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeec
Q 002899 715 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHED-SRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 793 (869)
Q Consensus 715 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~ 793 (869)
|+++++|.+++.... .+++..+..++.|++.||+|||+. + |+||||||+|||++.++.+||+|||++....
T Consensus 112 ~~~~~~L~~~l~~~~-----~~~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 183 (360)
T 3eqc_A 112 HMDGGSLDQVLKKAG-----RIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 183 (360)
T ss_dssp CCTTCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHHHC---CCCSCCSGGGEEECTTCCEEECCCCCCHHHH
T ss_pred CCCCCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHhCC---EEcCCccHHHEEECCCCCEEEEECCCCcccc
Confidence 999999999986543 589999999999999999999985 6 9999999999999999999999999987553
Q ss_pred CCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 002899 794 EDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNYR 846 (869)
Q Consensus 794 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~ 846 (869)
... .....||+.|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 184 ~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 233 (360)
T 3eqc_A 184 DSM---ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 233 (360)
T ss_dssp HHC-------CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCC
T ss_pred ccc---ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 221 22357899999999999999999999999999999999999999653
No 158
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=4.4e-33 Score=310.23 Aligned_cols=209 Identities=26% Similarity=0.383 Sum_probs=171.5
Q ss_pred ccHHHHHHHhcCCCCCCeeeccCceEEEEEEEcCCcEEEEEEecccCch-----------hhHHHHHHHHHHHhcCCCce
Q 002899 628 YTLRQIKAATNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQ-----------GNREFVNEIGMISAQQHPNL 696 (869)
Q Consensus 628 ~~~~~i~~~t~~f~~~~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~~~-----------~~~~f~~E~~~l~~l~H~nI 696 (869)
...+++....++|.+.+.||+|+||.||+|...+++.||||++...... ..+.+.+|++++++++||||
T Consensus 12 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 91 (362)
T 3pg1_A 12 DLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI 91 (362)
T ss_dssp HHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred HHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence 3456778889999999999999999999999888999999998653221 13678999999999999999
Q ss_pred eeEEeEEee-----CceEEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCC
Q 002899 697 VKLYGCCVE-----GNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTS 771 (869)
Q Consensus 697 v~l~~~~~~-----~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~ 771 (869)
+++++++.. ....++||||++ |+|.+.+.... ..+++..+..++.||+.||+|||+++ |+||||||+
T Consensus 92 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~ 163 (362)
T 3pg1_A 92 LGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR----IVISPQHIQYFMYHILLGLHVLHEAG---VVHRDLHPG 163 (362)
T ss_dssp CCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGG
T ss_pred cceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHCc---CEecCCChH
Confidence 999999854 336899999998 58888776543 26899999999999999999999998 999999999
Q ss_pred CEEEcCCCcEEEeecCCceeecCCCccccccccccccccchhhccc-CCCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 002899 772 NVLLDKDLNAKISDFGLAKLYEEDKTHISTRIAGTIGYMAPEYAMR-GYLTSKADVYSFGVVTLEIVSGKSNTNYR 846 (869)
Q Consensus 772 NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~ 846 (869)
|||++.++.+||+|||++....... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 164 NIl~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 237 (362)
T 3pg1_A 164 NILLADNNDITICDFNLAREDTADA--NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGS 237 (362)
T ss_dssp GEEECTTCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred HEEEcCCCCEEEEecCccccccccc--ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCC
Confidence 9999999999999999997554322 2234568999999999876 67899999999999999999999999653
No 159
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=4.1e-33 Score=302.70 Aligned_cols=199 Identities=25% Similarity=0.393 Sum_probs=173.2
Q ss_pred HhcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEEE
Q 002899 636 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 714 (869)
Q Consensus 636 ~t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 714 (869)
..++|.+.+.||+|+||.||+|+.. +++.||+|++..........+.+|++++++++||||+++++++.+.+..++|||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQ 86 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEE
Confidence 3467889999999999999999975 689999999986554455678899999999999999999999999999999999
Q ss_pred eccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEE---cCCCcEEEeecCCcee
Q 002899 715 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLL---DKDLNAKISDFGLAKL 791 (869)
Q Consensus 715 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl---~~~~~~kl~DFGla~~ 791 (869)
|+++++|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||++ +.++.+||+|||++..
T Consensus 87 ~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~ 158 (304)
T 2jam_A 87 LVSGGELFDRILERG-----VYTEKDASLVIQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKM 158 (304)
T ss_dssp CCCSCBHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCC
T ss_pred cCCCccHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEecCCCCCCEEEccCCccee
Confidence 999999999886542 5899999999999999999999998 9999999999999 7889999999999876
Q ss_pred ecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 792 YEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 792 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
..... .....||+.|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus 159 ~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 209 (304)
T 2jam_A 159 EQNGI---MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYE 209 (304)
T ss_dssp CCCBT---THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cCCCc---cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 54321 2234689999999999999999999999999999999999999854
No 160
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=9.7e-34 Score=331.65 Aligned_cols=202 Identities=31% Similarity=0.524 Sum_probs=175.2
Q ss_pred HhcCCCCCCeeeccCceEEEEEEEcCCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEEEe
Q 002899 636 ATNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEY 715 (869)
Q Consensus 636 ~t~~f~~~~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~ 715 (869)
..++|++.+.||+|+||.||+|.+.++..||||+++... ...++|.+|++++++++|||||++++++.+ +..++||||
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~ 342 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY 342 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeeh
Confidence 456788899999999999999999888889999997643 335689999999999999999999999876 678999999
Q ss_pred ccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeecCC
Q 002899 716 MKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEED 795 (869)
Q Consensus 716 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~ 795 (869)
+++|+|.+++.... ...+++..+..|+.||++||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 343 ~~~gsL~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 416 (535)
T 2h8h_A 343 MSKGSLLDFLKGET---GKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDN 416 (535)
T ss_dssp CTTEEHHHHHSHHH---HTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCH
T ss_pred hcCCcHHHHHhhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEEcCCCcEEEcccccceecCCC
Confidence 99999999996432 125899999999999999999999998 999999999999999999999999999866532
Q ss_pred CccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHc-CCCCCCC
Q 002899 796 KTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNY 845 (869)
Q Consensus 796 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~ 845 (869)
.........++..|+|||++....++.++|||||||++|||++ |+.||..
T Consensus 417 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~ 467 (535)
T 2h8h_A 417 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 467 (535)
T ss_dssp HHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTT
T ss_pred ceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 2222223456789999999998999999999999999999999 9999864
No 161
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=2.6e-33 Score=307.96 Aligned_cols=201 Identities=23% Similarity=0.388 Sum_probs=164.7
Q ss_pred HhcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCch--hhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEE
Q 002899 636 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQ--GNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLV 712 (869)
Q Consensus 636 ~t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~~--~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 712 (869)
..++|++.+.||+|+||.||+|... +++.||||++...... ..+.+.+|++++++++||||+++++++.+++..++|
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 111 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI 111 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence 3467889999999999999999965 6889999998754322 245678999999999999999999999999999999
Q ss_pred EEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEc-----CCCcEEEeecC
Q 002899 713 YEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLD-----KDLNAKISDFG 787 (869)
Q Consensus 713 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~-----~~~~~kl~DFG 787 (869)
|||++ |+|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||++ .++.+||+|||
T Consensus 112 ~e~~~-~~L~~~~~~~~-----~~~~~~~~~i~~ql~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg 182 (329)
T 3gbz_A 112 FEYAE-NDLKKYMDKNP-----DVSMRVIKSFLYQLINGVNFCHSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFG 182 (329)
T ss_dssp EECCS-EEHHHHHHHCT-----TCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEC-----CCEEEECCTT
T ss_pred EecCC-CCHHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC---EECCCCCHHHEEEecCCCCccceEEECcCC
Confidence 99998 48999886553 5899999999999999999999998 99999999999994 45569999999
Q ss_pred CceeecCCCccccccccccccccchhhcccC-CCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 002899 788 LAKLYEEDKTHISTRIAGTIGYMAPEYAMRG-YLTSKADVYSFGVVTLEIVSGKSNTNYR 846 (869)
Q Consensus 788 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~ 846 (869)
++........ ......||+.|+|||++.+. .++.++|||||||++|||++|+.||...
T Consensus 183 ~a~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 241 (329)
T 3gbz_A 183 LARAFGIPIR-QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGD 241 (329)
T ss_dssp HHHHHC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CccccCCccc-ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCC
Confidence 9987653322 22335689999999998864 5899999999999999999999999653
No 162
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.7e-33 Score=315.92 Aligned_cols=202 Identities=23% Similarity=0.349 Sum_probs=173.4
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccC-chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCc--eEEEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGN--QLLLV 712 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~--~~~lV 712 (869)
.++|.+.++||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv 87 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence 356888999999999999999976 58999999987543 233567889999999999999999999998755 77999
Q ss_pred EEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEE----cCCCcEEEeecCC
Q 002899 713 YEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLL----DKDLNAKISDFGL 788 (869)
Q Consensus 713 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl----~~~~~~kl~DFGl 788 (869)
|||+++|+|.+++..... ...+++..+..++.|++.||+|||+.+ |+||||||+|||+ +.++.+||+|||+
T Consensus 88 ~e~~~~g~L~~~l~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~ 162 (396)
T 4eut_A 88 MEFCPCGSLYTVLEEPSN--AYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (396)
T ss_dssp ECCCTTEEHHHHTTSGGG--TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEECTTSCEEEEECCGGG
T ss_pred EecCCCCCHHHHHHhhhc--ccCCCHHHHHHHHHHHHHHHHHHHHCC---EEECCcCHHHEEEeecCCCceeEEEecCCC
Confidence 999999999999965432 224899999999999999999999998 9999999999999 7778899999999
Q ss_pred ceeecCCCccccccccccccccchhhccc--------CCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 789 AKLYEEDKTHISTRIAGTIGYMAPEYAMR--------GYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 789 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
++....... .....||+.|+|||++.. ..++.++|||||||++|||++|+.||..
T Consensus 163 a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~ 225 (396)
T 4eut_A 163 ARELEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRP 225 (396)
T ss_dssp CEECCCGGG--SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEEC
T ss_pred ceEccCCCc--cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 987654322 234568999999999865 4678899999999999999999999964
No 163
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=9.1e-33 Score=297.18 Aligned_cols=200 Identities=32% Similarity=0.566 Sum_probs=169.8
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCchh-------hHHHHHHHHHHHhcCCCceeeEEeEEeeCce
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQG-------NREFVNEIGMISAQQHPNLVKLYGCCVEGNQ 708 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~~~-------~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~ 708 (869)
.++|++.+.||+|+||.||+|+.. +++.||+|++....... .+++.+|++++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 367888999999999999999975 78999999986543221 167899999999999999999999987655
Q ss_pred EEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCc-----EEE
Q 002899 709 LLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLN-----AKI 783 (869)
Q Consensus 709 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~-----~kl 783 (869)
++||||+++|+|.+.+.... ..+++..+..++.|++.||+|||+.+ ++|+||||||+|||++.++. +||
T Consensus 97 -~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~l~~~l~~lH~~~-~~ivH~dikp~Nil~~~~~~~~~~~~kl 170 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDKA----HPIKWSVKLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKV 170 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCTT----SCCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCSCCSGGGEEESCCCTTCSCCEEE
T ss_pred -eEEEEecCCCCHHHHHhccc----CCccHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcceEEEeccCCCCceeEEe
Confidence 69999999999998886543 26899999999999999999999885 34999999999999988776 999
Q ss_pred eecCCceeecCCCccccccccccccccchhhc--ccCCCCchhHHHHHHHHHHHHHcCCCCCCCCC
Q 002899 784 SDFGLAKLYEEDKTHISTRIAGTIGYMAPEYA--MRGYLTSKADVYSFGVVTLEIVSGKSNTNYRP 847 (869)
Q Consensus 784 ~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~--~~~~~~~k~DvwSlGvil~elltG~~p~~~~~ 847 (869)
+|||+++..... .....||+.|+|||++ ....++.++||||||+++|||++|+.||....
T Consensus 171 ~Dfg~~~~~~~~----~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 232 (287)
T 4f0f_A 171 ADFGLSQQSVHS----VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS 232 (287)
T ss_dssp CCCTTCBCCSSC----EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred CCCCcccccccc----ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCcccc
Confidence 999999754322 2335789999999998 34567899999999999999999999997543
No 164
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=3.2e-33 Score=306.93 Aligned_cols=201 Identities=31% Similarity=0.474 Sum_probs=176.4
Q ss_pred hcCCCCCCeeeccCceEEEEEEE-----cCCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCceeeEEeEEe--eCceE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGIL-----SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCV--EGNQL 709 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~-----~~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~--~~~~~ 709 (869)
.++|++.+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++. +....
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 101 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL 101 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence 35788899999999999999984 367899999998776666778999999999999999999999987 45678
Q ss_pred EEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCc
Q 002899 710 LLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLA 789 (869)
Q Consensus 710 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla 789 (869)
++||||+++++|.+++.... ..+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~ 174 (327)
T 3lxl_A 102 RLVMEYLPSGCLRDFLQRHR----ARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLA 174 (327)
T ss_dssp EEEEECCTTCBHHHHHHHHG----GGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCGGGC
T ss_pred EEEEeecCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChhhEEECCCCCEEEcccccc
Confidence 99999999999999986532 25899999999999999999999998 999999999999999999999999999
Q ss_pred eeecCCCcc--ccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCC
Q 002899 790 KLYEEDKTH--ISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTN 844 (869)
Q Consensus 790 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~ 844 (869)
......... ......||+.|+|||++.+..++.++||||||+++|||++|+.||.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~ 231 (327)
T 3lxl_A 175 KLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSC 231 (327)
T ss_dssp EECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGG
T ss_pred eecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCc
Confidence 877543321 2233467888999999998889999999999999999999999984
No 165
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.5e-32 Score=297.92 Aligned_cols=199 Identities=30% Similarity=0.514 Sum_probs=176.7
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccC-chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 714 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 714 (869)
.+.|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 356888999999999999999865 68899999987553 3345788999999999999999999999999999999999
Q ss_pred eccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeecC
Q 002899 715 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEE 794 (869)
Q Consensus 715 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~~ 794 (869)
|+++++|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 101 ~~~~~~L~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 171 (303)
T 3a7i_A 101 YLGGGSALDLLEPG------PLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTD 171 (303)
T ss_dssp CCTTEEHHHHHTTS------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECBT
T ss_pred eCCCCcHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChheEEECCCCCEEEeecccceecCc
Confidence 99999999988542 5899999999999999999999998 99999999999999999999999999987654
Q ss_pred CCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 795 DKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 795 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
.... .....||+.|+|||++....++.++||||||+++|||++|+.||..
T Consensus 172 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 221 (303)
T 3a7i_A 172 TQIK-RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSE 221 (303)
T ss_dssp TBCC-BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cccc-cCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCC
Confidence 3322 2335689999999999988999999999999999999999999864
No 166
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=3.6e-33 Score=302.56 Aligned_cols=199 Identities=30% Similarity=0.478 Sum_probs=170.7
Q ss_pred cCCCCCCeeeccCceEEEEEEE-----cCCcEEEEEEecccC-chhhHHHHHHHHHHHhcCCCceeeEEeEEeeC--ceE
Q 002899 638 NNFDPANKVGEGGFGSVYKGIL-----SDGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEG--NQL 709 (869)
Q Consensus 638 ~~f~~~~~IG~G~fG~Vyka~~-----~~g~~VAvK~~~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~--~~~ 709 (869)
+.|++.+.||+|+||.||+|++ .+++.||||+++... ....+.+.+|++++++++||||+++++++... ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 4577889999999999999984 368899999987543 33357789999999999999999999999876 668
Q ss_pred EEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCc
Q 002899 710 LLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLA 789 (869)
Q Consensus 710 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla 789 (869)
++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~ 173 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNK----NKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLT 173 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHT----TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTC
T ss_pred EEEEEeCCCCcHHHHHHhcc----ccCCHHHHHHHHHHHHHHHHHhhcCC---cccCCCchheEEEcCCCCEEECccccc
Confidence 99999999999999985432 25899999999999999999999998 999999999999999999999999999
Q ss_pred eeecCCCc--cccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCC
Q 002899 790 KLYEEDKT--HISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNT 843 (869)
Q Consensus 790 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~ 843 (869)
........ .......||..|+|||++.+..++.++||||||+++|||++|+.|+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~ 229 (302)
T 4e5w_A 174 KAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSD 229 (302)
T ss_dssp EECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGG
T ss_pred ccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCC
Confidence 87765432 1223356788899999999988999999999999999999999875
No 167
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.5e-33 Score=308.33 Aligned_cols=204 Identities=28% Similarity=0.424 Sum_probs=167.5
Q ss_pred HHHhcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCch-----hhHHHHHHHHHHHhcCCCceeeEEeEEeeCc
Q 002899 634 KAATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQ-----GNREFVNEIGMISAQQHPNLVKLYGCCVEGN 707 (869)
Q Consensus 634 ~~~t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~~-----~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~ 707 (869)
....++|++.+.||+|+||.||+|... +|+.||||++...... ..+.+.+|+++++.++||||+++++++.+.+
T Consensus 6 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 85 (346)
T 1ua2_A 6 KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS 85 (346)
T ss_dssp -------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred HHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC
Confidence 344578999999999999999999975 5899999998753221 1356889999999999999999999999999
Q ss_pred eEEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecC
Q 002899 708 QLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFG 787 (869)
Q Consensus 708 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFG 787 (869)
..++||||+++ +|.+++.... ..+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||
T Consensus 86 ~~~lv~e~~~~-~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg 157 (346)
T 1ua2_A 86 NISLVFDFMET-DLEVIIKDNS----LVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFG 157 (346)
T ss_dssp CCEEEEECCSE-EHHHHHTTCC----SSCCSSHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCG
T ss_pred ceEEEEEcCCC-CHHHHHHhcC----cCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCCHHHEEEcCCCCEEEEecc
Confidence 99999999986 7888876542 25888999999999999999999998 9999999999999999999999999
Q ss_pred CceeecCCCccccccccccccccchhhcccC-CCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 002899 788 LAKLYEEDKTHISTRIAGTIGYMAPEYAMRG-YLTSKADVYSFGVVTLEIVSGKSNTNYR 846 (869)
Q Consensus 788 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~ 846 (869)
+++....... ......||+.|+|||++.+. .++.++|||||||++|||++|++||...
T Consensus 158 ~a~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~ 216 (346)
T 1ua2_A 158 LAKSFGSPNR-AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGD 216 (346)
T ss_dssp GGSTTTSCCC-CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cceeccCCcc-cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCC
Confidence 9987643322 22345789999999998754 5899999999999999999999998653
No 168
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=6e-33 Score=322.37 Aligned_cols=198 Identities=30% Similarity=0.464 Sum_probs=169.4
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccC--chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 713 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 713 (869)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... ......+.+|+++++.++|||||++++++.+.+..++||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 456889999999999999999976 68899999987543 334577899999999999999999999999999999999
Q ss_pred EeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcC---CCcEEEeecCCce
Q 002899 714 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDK---DLNAKISDFGLAK 790 (869)
Q Consensus 714 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~---~~~~kl~DFGla~ 790 (869)
||+++|+|.+.+.... .+++..+..++.||++||+|||+.+ |+||||||+|||++. ++.+||+|||++.
T Consensus 116 e~~~~g~L~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~ 187 (494)
T 3lij_A 116 ECYKGGELFDEIIHRM-----KFNEVDAAVIIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSA 187 (494)
T ss_dssp ECCCSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred ecCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChhhEEEeCCCCCCcEEEEECCCCe
Confidence 9999999998886542 6899999999999999999999998 999999999999976 4559999999998
Q ss_pred eecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 791 LYEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 791 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
...... ......||+.|+|||++. ..++.++||||+||++|||++|+.||..
T Consensus 188 ~~~~~~--~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~ 239 (494)
T 3lij_A 188 VFENQK--KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGG 239 (494)
T ss_dssp ECBTTB--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ECCCCc--cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCC
Confidence 775432 223457999999999886 4689999999999999999999999965
No 169
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=1.2e-33 Score=309.33 Aligned_cols=214 Identities=26% Similarity=0.422 Sum_probs=180.2
Q ss_pred cHHHHHHHhcCCCCCCeeeccCceEEEEEEEc------CCcEEEEEEecccCc-hhhHHHHHHHHHHHhcCCCceeeEEe
Q 002899 629 TLRQIKAATNNFDPANKVGEGGFGSVYKGILS------DGTVIAVKQLSSKSR-QGNREFVNEIGMISAQQHPNLVKLYG 701 (869)
Q Consensus 629 ~~~~i~~~t~~f~~~~~IG~G~fG~Vyka~~~------~g~~VAvK~~~~~~~-~~~~~f~~E~~~l~~l~H~nIv~l~~ 701 (869)
..++++...++|++.+.||+|+||.||+|... +++.||||++..... ....+|.+|+++++.++||||+++++
T Consensus 16 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~ 95 (322)
T 1p4o_A 16 VPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLG 95 (322)
T ss_dssp CCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEE
T ss_pred ChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEE
Confidence 33445556788999999999999999999864 367899999975533 34557899999999999999999999
Q ss_pred EEeeCceEEEEEEeccCCchhhhhhcCCcc-----cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEc
Q 002899 702 CCVEGNQLLLVYEYMKNNCLSRAIFGKDTE-----YRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLD 776 (869)
Q Consensus 702 ~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~-----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~ 776 (869)
++.+.+..++||||+++|+|.+++...... ....+++..+..++.|++.||+|||+++ |+||||||+||+++
T Consensus 96 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~NIli~ 172 (322)
T 1p4o_A 96 VVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVA 172 (322)
T ss_dssp EECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCSGGGEEEC
T ss_pred EEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---CccCCCccceEEEc
Confidence 999999999999999999999988653211 1135799999999999999999999998 99999999999999
Q ss_pred CCCcEEEeecCCceeecCCCc-cccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHc-CCCCCCC
Q 002899 777 KDLNAKISDFGLAKLYEEDKT-HISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNY 845 (869)
Q Consensus 777 ~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~ 845 (869)
.++.+||+|||++........ .......+|+.|+|||++.+..++.++||||||+++|||++ |+.||..
T Consensus 173 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~ 243 (322)
T 1p4o_A 173 EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG 243 (322)
T ss_dssp TTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTT
T ss_pred CCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCcccc
Confidence 999999999999986543322 11223457889999999998899999999999999999999 8888864
No 170
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=7e-33 Score=301.42 Aligned_cols=198 Identities=31% Similarity=0.525 Sum_probs=164.3
Q ss_pred cCCCCCCeeeccCceEEEEEEEcCCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEEEecc
Q 002899 638 NNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYMK 717 (869)
Q Consensus 638 ~~f~~~~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~~~ 717 (869)
++|++.+.||+|+||.||+|... ++.||||++... ...+.|.+|++++++++||||+++++++. +..++||||++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~ 82 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAE 82 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCT
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCC
Confidence 46778899999999999999985 788999998643 34578999999999999999999999877 45789999999
Q ss_pred CCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCc-EEEeecCCceeecCCC
Q 002899 718 NNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLN-AKISDFGLAKLYEEDK 796 (869)
Q Consensus 718 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~-~kl~DFGla~~~~~~~ 796 (869)
+|+|.+++..... ...+++..+..++.|+++||+|||+.+..+|+||||||+|||++.++. +||+|||++.......
T Consensus 83 ~~~L~~~l~~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~ 160 (307)
T 2eva_A 83 GGSLYNVLHGAEP--LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHM 160 (307)
T ss_dssp TCBHHHHHHCSSS--EECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC--------
T ss_pred CCCHHHHHhccCC--CCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccccc
Confidence 9999999976532 235789999999999999999999943234999999999999998886 7999999997654321
Q ss_pred ccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 002899 797 THISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNYR 846 (869)
Q Consensus 797 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~ 846 (869)
....||+.|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 161 ----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~ 206 (307)
T 2eva_A 161 ----TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI 206 (307)
T ss_dssp --------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTT
T ss_pred ----ccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhh
Confidence 2346899999999999989999999999999999999999999653
No 171
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=6.5e-33 Score=304.99 Aligned_cols=201 Identities=25% Similarity=0.431 Sum_probs=169.5
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCc--hhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR--QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 713 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~--~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 713 (869)
.++|++.+.||+|+||.||+|... +++.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 356888999999999999999976 589999998865432 23456789999999999999999999999999999999
Q ss_pred EeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeec
Q 002899 714 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 793 (869)
Q Consensus 714 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~ 793 (869)
||+++++|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++....
T Consensus 104 e~~~~~~l~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 175 (331)
T 4aaa_A 104 EFVDHTILDDLELFPN-----GLDYQVVQKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLA 175 (331)
T ss_dssp ECCSEEHHHHHHHSTT-----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred ecCCcchHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHHCC---EEccCcChheEEEcCCCcEEEEeCCCceeec
Confidence 9999999988765432 5899999999999999999999998 9999999999999999999999999998765
Q ss_pred CCCccccccccccccccchhhcccC-CCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 002899 794 EDKTHISTRIAGTIGYMAPEYAMRG-YLTSKADVYSFGVVTLEIVSGKSNTNYR 846 (869)
Q Consensus 794 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~ 846 (869)
.... ......||+.|+|||++.+. .++.++||||||+++|||++|+.||...
T Consensus 176 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 228 (331)
T 4aaa_A 176 APGE-VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGD 228 (331)
T ss_dssp ---------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred CCcc-ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 4322 22235689999999998765 7899999999999999999999999653
No 172
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=7.4e-33 Score=304.02 Aligned_cols=202 Identities=29% Similarity=0.539 Sum_probs=165.7
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCc----EEEEEEeccc-CchhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGT----VIAVKQLSSK-SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLL 710 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~----~VAvK~~~~~-~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 710 (869)
.++|++.++||+|+||.||+|... +++ +||+|.+... .....+++.+|++++++++||||+++++++.... .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 357889999999999999999964 344 3678877544 3345678999999999999999999999998764 78
Q ss_pred EEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCce
Q 002899 711 LVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAK 790 (869)
Q Consensus 711 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~ 790 (869)
+|+||+++|+|.+++.... ..+++..+..++.|+++||+|||+++ |+||||||+|||++.++.+||+|||+++
T Consensus 93 ~v~~~~~~g~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kL~DfG~a~ 165 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp EEECCCSSCBHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTC--
T ss_pred EEEEecCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHhhCC---CcCCCCCHHHEEEcCCCCEEEccCccee
Confidence 9999999999999987643 25899999999999999999999998 9999999999999999999999999998
Q ss_pred eecCCCcc-ccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHc-CCCCCCCC
Q 002899 791 LYEEDKTH-ISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNYR 846 (869)
Q Consensus 791 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~ 846 (869)
........ ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||...
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~ 223 (327)
T 3lzb_A 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223 (327)
T ss_dssp --------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred EccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence 76543221 1222456789999999999999999999999999999999 99999654
No 173
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.5e-33 Score=310.67 Aligned_cols=196 Identities=26% Similarity=0.418 Sum_probs=165.2
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccC--chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCc------
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGN------ 707 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~------ 707 (869)
.++|++.+.||+|+||.||+|... +|+.||||++.... ....+++.+|+++++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 467889999999999999999974 68999999986532 233567889999999999999999999998653
Q ss_pred eEEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecC
Q 002899 708 QLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFG 787 (869)
Q Consensus 708 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFG 787 (869)
..++||||+ +++|.+++... .+++..+..++.||++||+|||+.+ |+||||||+|||++.++.+||+|||
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~------~l~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg 173 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHE------KLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFG 173 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCT
T ss_pred eEEEEEecC-CCCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCHHHEEEcCCCCEEEEeee
Confidence 469999999 78999988653 5899999999999999999999998 9999999999999999999999999
Q ss_pred CceeecCCCccccccccccccccchhhccc-CCCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 002899 788 LAKLYEEDKTHISTRIAGTIGYMAPEYAMR-GYLTSKADVYSFGVVTLEIVSGKSNTNYR 846 (869)
Q Consensus 788 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~ 846 (869)
+++..... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||...
T Consensus 174 ~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 229 (367)
T 1cm8_A 174 LARQADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGS 229 (367)
T ss_dssp TCEECCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccccccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCC
Confidence 99876432 223568999999999876 67999999999999999999999999653
No 174
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=5.1e-33 Score=307.74 Aligned_cols=200 Identities=22% Similarity=0.300 Sum_probs=165.3
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc----CCcEEEEEEecccCch-----------hhHHHHHHHHHHHhcCCCceeeEEe
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS----DGTVIAVKQLSSKSRQ-----------GNREFVNEIGMISAQQHPNLVKLYG 701 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~----~g~~VAvK~~~~~~~~-----------~~~~f~~E~~~l~~l~H~nIv~l~~ 701 (869)
.++|.+.+.||+|+||.||+|... ++..||||++...... ....+.+|+..+..++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 356888999999999999999975 5678999998754321 1234677888999999999999999
Q ss_pred EEee----CceEEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcC
Q 002899 702 CCVE----GNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDK 777 (869)
Q Consensus 702 ~~~~----~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~ 777 (869)
++.. ....++||||+ +++|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~ 186 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG-----TFKKSTVLQLGIRMLDVLEYIHENE---YVHGDIKAANLLLGY 186 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG-----BCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEES
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCcCHHHEEEcc
Confidence 9988 77899999999 999999986543 6899999999999999999999997 999999999999998
Q ss_pred CC--cEEEeecCCceeecCCCcc------ccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 778 DL--NAKISDFGLAKLYEEDKTH------ISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 778 ~~--~~kl~DFGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
++ .+||+|||+++.+...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 187 ~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~ 262 (345)
T 2v62_A 187 KNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQ 262 (345)
T ss_dssp SSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGG
T ss_pred CCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 87 9999999999876432211 11335789999999999998999999999999999999999999954
No 175
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=2e-32 Score=295.56 Aligned_cols=201 Identities=30% Similarity=0.422 Sum_probs=170.7
Q ss_pred CCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEEEecc
Q 002899 639 NFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYMK 717 (869)
Q Consensus 639 ~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~~~ 717 (869)
+|....+||+|+||.||+|... +++.||||.+........+.+.+|+++++.++||||+++++++.+.+..++||||++
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 102 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP 102 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence 3455669999999999999974 688999999987666667789999999999999999999999999999999999999
Q ss_pred CCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcC-CCcEEEeecCCceeecCCC
Q 002899 718 NNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDK-DLNAKISDFGLAKLYEEDK 796 (869)
Q Consensus 718 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~-~~~~kl~DFGla~~~~~~~ 796 (869)
+++|.+++..... ...+++..+..++.|+++||+|||+.+ |+||||||+||+++. ++.+||+|||++.......
T Consensus 103 ~~~L~~~l~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~ 177 (295)
T 2clq_A 103 GGSLSALLRSKWG--PLKDNEQTIGFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN 177 (295)
T ss_dssp EEEHHHHHHHTTC--CCTTCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTCCEEECCTTTCEESCC--
T ss_pred CCCHHHHHHhhcc--CCCccHHHHHHHHHHHHHHHHHHHhCC---EEccCCChhhEEEECCCCCEEEeecccccccCCCC
Confidence 9999999875432 235678999999999999999999998 999999999999987 8999999999998765432
Q ss_pred ccccccccccccccchhhcccC--CCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 797 THISTRIAGTIGYMAPEYAMRG--YLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 797 ~~~~~~~~gt~~y~aPE~~~~~--~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
. ......|++.|+|||++... .++.++||||||+++|||++|+.||..
T Consensus 178 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 227 (295)
T 2clq_A 178 P-CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYE 227 (295)
T ss_dssp ----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGG
T ss_pred C-cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccC
Confidence 2 12345689999999998764 388999999999999999999999954
No 176
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=4.8e-33 Score=296.19 Aligned_cols=197 Identities=23% Similarity=0.375 Sum_probs=169.8
Q ss_pred cCCCCCCeeeccCceEEEEEEEcCCcEEEEEEecccC--chhhHHHHHHHHHHHhcCCCceeeEEeEEeeC--ceEEEEE
Q 002899 638 NNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEG--NQLLLVY 713 (869)
Q Consensus 638 ~~f~~~~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lV~ 713 (869)
++|++.+.||+|+||.||+|+.. ++.||||+++... ....++|.+|++++++++||||+++++++.+. +..++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 56888999999999999999985 8889999987653 34456799999999999999999999999887 7889999
Q ss_pred EeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeec
Q 002899 714 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 793 (869)
Q Consensus 714 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~ 793 (869)
||+++|+|.+++..... ..+++..+..++.|+++||+|||+.+ ++++||||||+||+++.++.++|+|||++....
T Consensus 89 e~~~~~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~ 164 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGTN---FVVDQSQAVKFALDMARGMAFLHTLE-PLIPRHALNSRSVMIDEDMTARISMADVKFSFQ 164 (271)
T ss_dssp ECCTTCBHHHHHHSCSS---CCCCHHHHHHHHHHHHHHHHHHTTSS-SCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS
T ss_pred cccCCCcHHHHHhhccc---CCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCccceEEEcCCcceeEEeccceeeec
Confidence 99999999999976532 25899999999999999999999875 359999999999999999999999998865432
Q ss_pred CCCccccccccccccccchhhcccCCCCc---hhHHHHHHHHHHHHHcCCCCCCC
Q 002899 794 EDKTHISTRIAGTIGYMAPEYAMRGYLTS---KADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 794 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---k~DvwSlGvil~elltG~~p~~~ 845 (869)
. ....||+.|+|||++.+...+. ++||||||+++|||++|+.||..
T Consensus 165 ~------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 213 (271)
T 3kmu_A 165 S------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFAD 213 (271)
T ss_dssp C------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTT
T ss_pred c------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 2 1246889999999998654443 89999999999999999999964
No 177
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=2e-32 Score=295.47 Aligned_cols=203 Identities=24% Similarity=0.333 Sum_probs=168.5
Q ss_pred HHhcCCCCCCeeeccCceEEEEEEE-cCCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCceeeEEeEE-eeCceEEEE
Q 002899 635 AATNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCC-VEGNQLLLV 712 (869)
Q Consensus 635 ~~t~~f~~~~~IG~G~fG~Vyka~~-~~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~-~~~~~~~lV 712 (869)
...++|++.+.||+|+||.||+|+. .+++.||||++.... ...++..|++++..++|++++..++.+ ...+..++|
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (296)
T 4hgt_A 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV 83 (296)
T ss_dssp -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEE
Confidence 3457899999999999999999996 478899999875433 234688999999999988877665554 667788999
Q ss_pred EEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEE---cCCCcEEEeecCCc
Q 002899 713 YEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLL---DKDLNAKISDFGLA 789 (869)
Q Consensus 713 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl---~~~~~~kl~DFGla 789 (869)
|||+ +++|.+++.... ..+++..+..++.|++.||+|||+++ |+||||||+|||+ +.++.+||+|||++
T Consensus 84 ~e~~-~~~L~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a 155 (296)
T 4hgt_A 84 MELL-GPSLEDLFNFCS----RKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155 (296)
T ss_dssp EECC-CCBHHHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECCGGGTTCEEECCCTTC
T ss_pred EEcc-CCCHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeeeeccCCCCeEEEecCccc
Confidence 9999 899999986432 25899999999999999999999998 9999999999999 78899999999999
Q ss_pred eeecCCCcc------ccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCCCC
Q 002899 790 KLYEEDKTH------ISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNYRP 847 (869)
Q Consensus 790 ~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~ 847 (869)
+........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 219 (296)
T 4hgt_A 156 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLK 219 (296)
T ss_dssp EECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCC
T ss_pred eeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccc
Confidence 877543321 1224578999999999999999999999999999999999999997643
No 178
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=9.3e-33 Score=296.26 Aligned_cols=196 Identities=27% Similarity=0.472 Sum_probs=172.0
Q ss_pred HhcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCceeeEEeEEee---------
Q 002899 636 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVE--------- 705 (869)
Q Consensus 636 ~t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~--------- 705 (869)
..++|++.+.||+|+||.||+|... +++.||+|++.... ..+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 4467889999999999999999986 78999999987543 467789999999999999999998864
Q ss_pred -------CceEEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCC
Q 002899 706 -------GNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKD 778 (869)
Q Consensus 706 -------~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~ 778 (869)
....++||||+++|+|.+++.... ...+++..+..++.|+++||+|||+.+ |+||||||+|||++.+
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~ 158 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR---GEKLDKVLALELFEQITKGVDYIHSKK---LINRDLKPSNIFLVDT 158 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGG---GSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEET
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhcc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHEEEcCC
Confidence 455899999999999999996542 236899999999999999999999998 9999999999999999
Q ss_pred CcEEEeecCCceeecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCC
Q 002899 779 LNAKISDFGLAKLYEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNT 843 (869)
Q Consensus 779 ~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~ 843 (869)
+.+||+|||++........ .....||+.|+|||++.+..++.++||||||+++|||++|+.|+
T Consensus 159 ~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~ 221 (284)
T 2a19_B 159 KQVKIGDFGLVTSLKNDGK--RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTA 221 (284)
T ss_dssp TEEEECCCTTCEESSCCSC--CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSH
T ss_pred CCEEECcchhheecccccc--ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcc
Confidence 9999999999987654332 22346899999999999889999999999999999999999886
No 179
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=7.2e-33 Score=298.53 Aligned_cols=199 Identities=32% Similarity=0.547 Sum_probs=160.4
Q ss_pred hcCCCCCCeeeccCceEEEEEEEcCCcEEEEEEecccC--chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 714 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 714 (869)
.++|++.+.||+|+||.||+|+.. ..||||+++... ....+.|.+|++++++++||||+++++++ ..+..++|||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence 467889999999999999999864 359999987543 33456799999999999999999999965 4557899999
Q ss_pred eccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeecC
Q 002899 715 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEE 794 (869)
Q Consensus 715 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~~ 794 (869)
|+++++|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 100 ~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 172 (289)
T 3og7_A 100 WCEGSSLYHHLHASE----TKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSR 172 (289)
T ss_dssp CCCEEEHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEEEECCCC-------
T ss_pred ecCCCcHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEECCCCCEEEccceecccccc
Confidence 999999999986543 26899999999999999999999998 99999999999999999999999999976543
Q ss_pred CC-ccccccccccccccchhhcc---cCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 795 DK-THISTRIAGTIGYMAPEYAM---RGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 795 ~~-~~~~~~~~gt~~y~aPE~~~---~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
.. ........||+.|+|||++. ...++.++||||||+++|||++|+.||..
T Consensus 173 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 227 (289)
T 3og7_A 173 WSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSN 227 (289)
T ss_dssp -----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSS
T ss_pred ccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccc
Confidence 22 22223456899999999986 56788899999999999999999999965
No 180
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.6e-32 Score=319.51 Aligned_cols=200 Identities=30% Similarity=0.467 Sum_probs=172.1
Q ss_pred HhcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCc-------------hhhHHHHHHHHHHHhcCCCceeeEEe
Q 002899 636 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR-------------QGNREFVNEIGMISAQQHPNLVKLYG 701 (869)
Q Consensus 636 ~t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~-------------~~~~~f~~E~~~l~~l~H~nIv~l~~ 701 (869)
..++|.+.++||+|+||+||+|... +++.||||++..... ...+.+.+|++++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 4578999999999999999999976 578999999865421 23467889999999999999999999
Q ss_pred EEeeCceEEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCC--
Q 002899 702 CCVEGNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDL-- 779 (869)
Q Consensus 702 ~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~-- 779 (869)
++.+.+..++||||+++|+|.+.+.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~ 185 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINRH-----KFDECDAANIMKQILSGICYLHKHN---IVHRDIKPENILLENKNSL 185 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESSTTCC
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCcHHHEEEecCCCC
Confidence 9999999999999999999999886542 6899999999999999999999998 99999999999998775
Q ss_pred -cEEEeecCCceeecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 002899 780 -NAKISDFGLAKLYEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNYR 846 (869)
Q Consensus 780 -~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~ 846 (869)
.+||+|||++........ .....||+.|+|||++. ..++.++||||+||++|||++|+.||...
T Consensus 186 ~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~ 250 (504)
T 3q5i_A 186 LNIKIVDFGLSSFFSKDYK--LRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQ 250 (504)
T ss_dssp SSEEECCCTTCEECCTTSC--BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccEEEEECCCCEEcCCCCc--cccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCC
Confidence 699999999987754322 23457999999999987 46899999999999999999999999653
No 181
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=4.7e-33 Score=303.56 Aligned_cols=216 Identities=27% Similarity=0.418 Sum_probs=180.9
Q ss_pred ccHHHHHHHhcCCCCCCeeeccCceEEEEEEE------cCCcEEEEEEecccCc-hhhHHHHHHHHHHHhc-CCCceeeE
Q 002899 628 YTLRQIKAATNNFDPANKVGEGGFGSVYKGIL------SDGTVIAVKQLSSKSR-QGNREFVNEIGMISAQ-QHPNLVKL 699 (869)
Q Consensus 628 ~~~~~i~~~t~~f~~~~~IG~G~fG~Vyka~~------~~g~~VAvK~~~~~~~-~~~~~f~~E~~~l~~l-~H~nIv~l 699 (869)
+...+.....++|++.+.||+|+||.||+|.. .+++.||||+++.... ...+.+.+|++++.++ +||||+++
T Consensus 17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 34445555678899999999999999999985 2468899999976543 3456789999999999 79999999
Q ss_pred EeEEeeCc-eEEEEEEeccCCchhhhhhcCCccc-----------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcC
Q 002899 700 YGCCVEGN-QLLLVYEYMKNNCLSRAIFGKDTEY-----------RLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRD 767 (869)
Q Consensus 700 ~~~~~~~~-~~~lV~E~~~~gsL~~~l~~~~~~~-----------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~D 767 (869)
++++...+ ..++||||+++|+|.+++....... ...+++..+..++.|+++||+|||+.+ |+|||
T Consensus 97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~d 173 (316)
T 2xir_A 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRD 173 (316)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT---CCCSC
T ss_pred EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC---ccccc
Confidence 99988755 5899999999999999997654321 123789999999999999999999998 99999
Q ss_pred CCCCCEEEcCCCcEEEeecCCceeecCCCcc-ccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHc-CCCCCCC
Q 002899 768 IKTSNVLLDKDLNAKISDFGLAKLYEEDKTH-ISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNY 845 (869)
Q Consensus 768 lk~~NILl~~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~ 845 (869)
|||+||+++.++.+||+|||+++........ ......||+.|+|||++.+..++.++||||||+++|||++ |+.||..
T Consensus 174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~ 253 (316)
T 2xir_A 174 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253 (316)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcc
Confidence 9999999999999999999999876543322 2233567889999999999999999999999999999998 9999965
Q ss_pred C
Q 002899 846 R 846 (869)
Q Consensus 846 ~ 846 (869)
.
T Consensus 254 ~ 254 (316)
T 2xir_A 254 V 254 (316)
T ss_dssp C
T ss_pred c
Confidence 3
No 182
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=7.9e-33 Score=320.74 Aligned_cols=199 Identities=28% Similarity=0.457 Sum_probs=172.9
Q ss_pred HhcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccC--chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEE
Q 002899 636 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLV 712 (869)
Q Consensus 636 ~t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 712 (869)
..++|++.++||+|+||+||+|... +++.||||++.... ......+.+|++++++++||||+++++++.+.+..++|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 3467999999999999999999976 68999999986432 23456789999999999999999999999999999999
Q ss_pred EEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEc---CCCcEEEeecCCc
Q 002899 713 YEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLD---KDLNAKISDFGLA 789 (869)
Q Consensus 713 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~---~~~~~kl~DFGla 789 (869)
|||+++|+|.+.+.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++ .++.+||+|||++
T Consensus 100 ~e~~~~~~L~~~~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a 171 (486)
T 3mwu_A 100 GELYTGGELFDEIIKRK-----RFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLS 171 (486)
T ss_dssp ECCCCSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEESSSSTTCCEEECSCSCT
T ss_pred EEcCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEEECCcC
Confidence 99999999998886543 6899999999999999999999998 99999999999995 5668999999999
Q ss_pred eeecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 790 KLYEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 790 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
........ .....||+.|+|||++.+ .++.++||||+||++|||++|+.||..
T Consensus 172 ~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~ 224 (486)
T 3mwu_A 172 TCFQQNTK--MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYG 224 (486)
T ss_dssp TTBCCC------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred eECCCCCc--cCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 86654322 234579999999999875 589999999999999999999999964
No 183
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1.4e-32 Score=295.20 Aligned_cols=200 Identities=25% Similarity=0.405 Sum_probs=171.2
Q ss_pred HhcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEeccc--CchhhHHHHHHHHHHHhc-CCCceeeEEeEEeeCceEEE
Q 002899 636 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSK--SRQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQLLL 711 (869)
Q Consensus 636 ~t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~--~~~~~~~f~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~l 711 (869)
..++|++.+.||+|+||.||+|... +++.||||++... ......++.+|+..+..+ +||||+++++++.+++..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 3567889999999999999999986 7899999998754 233456788999999998 99999999999999999999
Q ss_pred EEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCC-------------
Q 002899 712 VYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKD------------- 778 (869)
Q Consensus 712 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~------------- 778 (869)
||||+++++|.+++..... ....+++..+..++.||++||+|||+++ |+||||||+|||++.+
T Consensus 89 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~~~~~~~~~~~ 164 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYR-IMSYFKEAELKDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDED 164 (289)
T ss_dssp EEECCTTCBHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC---------------
T ss_pred EEEecCCCcHHHHHHhhcc-cccCCCHHHHHHHHHHHHHHHHHHHhCC---EeecCCCHHHEEEcCCCCCcccccccccc
Confidence 9999999999999865421 1236899999999999999999999998 9999999999999844
Q ss_pred ------CcEEEeecCCceeecCCCccccccccccccccchhhcccC-CCCchhHHHHHHHHHHHHHcCCCCCC
Q 002899 779 ------LNAKISDFGLAKLYEEDKTHISTRIAGTIGYMAPEYAMRG-YLTSKADVYSFGVVTLEIVSGKSNTN 844 (869)
Q Consensus 779 ------~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~ 844 (869)
..+||+|||.+....... ...||+.|+|||++.+. .+++++||||||+++|||++|++|+.
T Consensus 165 ~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~ 232 (289)
T 1x8b_A 165 DWASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPR 232 (289)
T ss_dssp -----CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCS
T ss_pred cccCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCc
Confidence 479999999998765432 23589999999999765 56789999999999999999997753
No 184
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1e-32 Score=303.80 Aligned_cols=201 Identities=30% Similarity=0.514 Sum_probs=166.5
Q ss_pred cCCCCCCeeeccCceEEEEEEEcC-----CcEEEEEEecccCc-hhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEE
Q 002899 638 NNFDPANKVGEGGFGSVYKGILSD-----GTVIAVKQLSSKSR-QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLL 711 (869)
Q Consensus 638 ~~f~~~~~IG~G~fG~Vyka~~~~-----g~~VAvK~~~~~~~-~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 711 (869)
++|++.+.||+|+||.||+|.... +..||||.++.... ....++.+|++++++++||||+++++++...+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 456678999999999999998653 24699999976533 345678999999999999999999999999999999
Q ss_pred EEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCcee
Q 002899 712 VYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKL 791 (869)
Q Consensus 712 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~ 791 (869)
||||+++|+|.+++.... ..+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||++..
T Consensus 124 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 196 (333)
T 1mqb_A 124 ITEYMENGALDKFLREKD----GEFSVLQLVGMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRV 196 (333)
T ss_dssp EEECCTTEEHHHHHHHTT----TCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred EEeCCCCCcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChheEEECCCCcEEECCCCcchh
Confidence 999999999999986542 26899999999999999999999998 99999999999999999999999999987
Q ss_pred ecCCCcc--ccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHc-CCCCCCC
Q 002899 792 YEEDKTH--ISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNY 845 (869)
Q Consensus 792 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~ 845 (869)
....... ......+|+.|+|||++....++.++||||||+++|||++ |+.||..
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~ 253 (333)
T 1mqb_A 197 LEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWE 253 (333)
T ss_dssp --------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred hccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCccc
Confidence 6543221 1122346788999999998899999999999999999999 9999954
No 185
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.4e-33 Score=328.91 Aligned_cols=194 Identities=29% Similarity=0.482 Sum_probs=164.4
Q ss_pred eeeccCceEEEEEEEc---CCcEEEEEEecccC-chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEEEeccCCc
Q 002899 645 KVGEGGFGSVYKGILS---DGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYMKNNC 720 (869)
Q Consensus 645 ~IG~G~fG~Vyka~~~---~g~~VAvK~~~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~~~~gs 720 (869)
.||+|+||.||+|.+. ++..||||+++... ....++|.+|++++++++|||||++++++.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999874 45679999997653 3356789999999999999999999999976 56899999999999
Q ss_pred hhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeecCCCcccc
Q 002899 721 LSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEEDKTHIS 800 (869)
Q Consensus 721 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 800 (869)
|.+++.... ..+++..+..++.||++||+|||+++ |+||||||+|||++.++.+||+|||+++..........
T Consensus 422 L~~~l~~~~----~~l~~~~~~~i~~qi~~~L~~LH~~~---iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 494 (613)
T 2ozo_A 422 LHKFLVGKR----EEIPVSNVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 494 (613)
T ss_dssp HHHHHTTCT----TTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCSTTTTCC-------
T ss_pred HHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceee
Confidence 999996543 26899999999999999999999998 99999999999999999999999999987654322211
Q ss_pred --ccccccccccchhhcccCCCCchhHHHHHHHHHHHHHc-CCCCCCCC
Q 002899 801 --TRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNYR 846 (869)
Q Consensus 801 --~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~ 846 (869)
....+++.|+|||++....++.++|||||||++|||++ |+.||...
T Consensus 495 ~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~ 543 (613)
T 2ozo_A 495 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM 543 (613)
T ss_dssp -------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred eccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence 12345689999999998999999999999999999998 99999653
No 186
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=8e-33 Score=341.97 Aligned_cols=229 Identities=18% Similarity=0.152 Sum_probs=155.4
Q ss_pred cccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcCCCCchHhhhcCCCC
Q 002899 144 DIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSL 223 (869)
Q Consensus 144 ~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L 223 (869)
.|..+++|++|+|++|+|++..|..|.++++|++|+|++|++++..|..|..+++|+.|+|++|.+....+..|..+++|
T Consensus 285 ~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L 364 (844)
T 3j0a_A 285 VFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKL 364 (844)
T ss_dssp CSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCC
T ss_pred hhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCC
Confidence 34455566666666666665556666666666666666666666666666666666666666666666666666667777
Q ss_pred CEEEcCCCCCCCCccc-----------------------------------------ccccccceEEEcccccCccC---
Q 002899 224 TDLRISDLKGSESAFP-----------------------------------------KLDKMNLKTLILTKCLIHGE--- 259 (869)
Q Consensus 224 ~~L~L~~n~~~~~~~~-----------------------------------------~~~~~~L~~L~Ls~N~i~~~--- 259 (869)
+.|+|++|.++..... .....+|+.|+|++|++++.
T Consensus 365 ~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 444 (844)
T 3j0a_A 365 QTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGD 444 (844)
T ss_dssp CEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSS
T ss_pred CEEECCCCCCCcccCCCCcchhccCCCCcccccccccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccc
Confidence 7777776665542210 00122455555555555422
Q ss_pred ---------------------------CCcccCCCCCcCEEeccCCCCCCCCchhhhcCCCCCEEEeeCCcCCCCCchhh
Q 002899 260 ---------------------------IPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYI 312 (869)
Q Consensus 260 ---------------------------~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 312 (869)
.+..|..+++|+.|+|++|+|++.+|..|.++++|+.|+|++|+|++..|..+
T Consensus 445 ~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~ 524 (844)
T 3j0a_A 445 QTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDL 524 (844)
T ss_dssp SSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCC
T ss_pred cccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhh
Confidence 23446677888888888888888888889999999999999999998777777
Q ss_pred hccCCceeeeccCccCCC-------------CCCCCCCCCCccceeccCCCCCCCCCCcCccCCCCCCCCCcccccc
Q 002899 313 FNSNKNVDISLNNFTWES-------------SDPIECPRGSVNLVESYSSPRNKLDKVHPCLRQNFPCSAPADQYHY 376 (869)
Q Consensus 313 ~~~l~~l~ls~N~~~~~~-------------~~p~~C~c~~~~~~~~l~~~~~~~~~~~~~~~~~~~C~~p~~~~~~ 376 (869)
...++.|+|++|+++... .|||.|+|++.||..|+......+.. ......|+.|+...+.
T Consensus 525 ~~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~~C~c~~~~f~~~~~~~~~~~~~----~~~~~~C~~p~~~~g~ 597 (844)
T 3j0a_A 525 PANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFICECELSTFINWLNHTNVTIAG----PPADIYCVYPDSFSGV 597 (844)
T ss_dssp CSCCCEEEEEEECCCCCCSCCCSSCCEEEEEEECCCCSSSCCSHHHHHHHTTTTTCC----CGGGCCCSSCSSSCSC
T ss_pred hccccEEECCCCcCCCCChhHhCCcCEEEecCCCcccccccHHHHHHHHhcCccccc----ccccCccCCchhhCCC
Confidence 788999999999988654 47999999999999998754433321 1234567777665443
No 187
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=6.1e-33 Score=321.65 Aligned_cols=198 Identities=30% Similarity=0.488 Sum_probs=174.8
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccC---chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLV 712 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 712 (869)
.++|++.++||+|+||.||+|... +++.||||++.... ......+.+|++++++++||||+++++++.+.+..++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 457889999999999999999976 78999999986542 33467789999999999999999999999999999999
Q ss_pred EEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEE---cCCCcEEEeecCCc
Q 002899 713 YEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLL---DKDLNAKISDFGLA 789 (869)
Q Consensus 713 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl---~~~~~~kl~DFGla 789 (869)
|||+.+|+|.+.+.... .+++..+..++.||+.||+|||+++ |+||||||+|||+ +.++.+||+|||++
T Consensus 105 ~e~~~~~~L~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a 176 (484)
T 3nyv_A 105 GEVYTGGELFDEIISRK-----RFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLS 176 (484)
T ss_dssp ECCCCSCBHHHHHHTCS-----CCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSTTCCEEECCTTHH
T ss_pred EecCCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEecCCCCCcEEEEeeeee
Confidence 99999999999886653 5899999999999999999999998 9999999999999 56789999999999
Q ss_pred eeecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 790 KLYEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 790 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
........ .....||+.|+|||++.+ .++.++||||+||++|||++|++||..
T Consensus 177 ~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~ 229 (484)
T 3nyv_A 177 THFEASKK--MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNG 229 (484)
T ss_dssp HHBCCCCS--HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred EEcccccc--cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCC
Confidence 87654332 233569999999999876 689999999999999999999999965
No 188
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=3.2e-32 Score=294.09 Aligned_cols=201 Identities=24% Similarity=0.343 Sum_probs=171.5
Q ss_pred hcCCCCCCeeeccCceEEEEEEE-cCCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCceeeEEeEE-eeCceEEEEEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCC-VEGNQLLLVYE 714 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~-~~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~-~~~~~~~lV~E 714 (869)
.++|++.+.||+|+||.||+|+. .+++.||||++..... ..++.+|++++..++|++++..+.++ .+.+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 56889999999999999999997 5789999999865432 35688999999999998866555544 66778899999
Q ss_pred eccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEE---cCCCcEEEeecCCcee
Q 002899 715 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLL---DKDLNAKISDFGLAKL 791 (869)
Q Consensus 715 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl---~~~~~~kl~DFGla~~ 791 (869)
|+ +++|.+++.... ..+++..+..++.|++.||+|||+++ |+||||||+|||+ +.++.+||+|||++..
T Consensus 86 ~~-~~~L~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~ 157 (296)
T 3uzp_A 86 LL-GPSLEDLFNFCS----RKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 157 (296)
T ss_dssp CC-CCBHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred ec-CCCHHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHeEEecCCCCCeEEEeeCCCccc
Confidence 99 899999986432 26899999999999999999999998 9999999999999 4889999999999987
Q ss_pred ecCCCcc------ccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCCCC
Q 002899 792 YEEDKTH------ISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNYRP 847 (869)
Q Consensus 792 ~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~ 847 (869)
....... ......||+.|+|||++.+..++.++||||||+++|||++|+.||....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 219 (296)
T 3uzp_A 158 YRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLK 219 (296)
T ss_dssp CBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCC
T ss_pred ccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcC
Confidence 7654321 1234578999999999999999999999999999999999999997643
No 189
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.1e-32 Score=309.68 Aligned_cols=202 Identities=24% Similarity=0.345 Sum_probs=165.8
Q ss_pred HHHhcCCCCCCeeeccCceEEEEEEE-cCCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCceeeEEeEEeeC------
Q 002899 634 KAATNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEG------ 706 (869)
Q Consensus 634 ~~~t~~f~~~~~IG~G~fG~Vyka~~-~~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~------ 706 (869)
+...++|.+.+.||+|+||.||+|.. .+++.||||++.... ....+|+++++.++|||||++++++...
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP----RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 44567899999999999999999997 478999999986542 2234799999999999999999998543
Q ss_pred --------------------------------ceEEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHH
Q 002899 707 --------------------------------NQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAY 754 (869)
Q Consensus 707 --------------------------------~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~y 754 (869)
...++||||++ |+|.+.+.... .....+++..+..++.||++||+|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~l~~~~~~~i~~qi~~aL~~ 156 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFI-RSGRSIPMNLISIYIYQLFRAVGF 156 (383)
T ss_dssp -------------------------------CCEEEEEECCCS-EEHHHHHHHHH-HTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHH
Confidence 34889999998 57777665321 112368999999999999999999
Q ss_pred HHhcCCCCeEEcCCCCCCEEEc-CCCcEEEeecCCceeecCCCccccccccccccccchhhcccC-CCCchhHHHHHHHH
Q 002899 755 LHEDSRIKIVHRDIKTSNVLLD-KDLNAKISDFGLAKLYEEDKTHISTRIAGTIGYMAPEYAMRG-YLTSKADVYSFGVV 832 (869)
Q Consensus 755 LH~~~~~~iiH~Dlk~~NILl~-~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~DvwSlGvi 832 (869)
||+.+ |+||||||+|||++ .++.+||+|||+++....... .....||+.|+|||++.+. .++.++||||+||+
T Consensus 157 LH~~g---i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i 231 (383)
T 3eb0_A 157 IHSLG---ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP--SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCV 231 (383)
T ss_dssp HHTTT---EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC--CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred HHHCc---CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC--CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHH
Confidence 99998 99999999999998 689999999999987654332 2345689999999998764 58999999999999
Q ss_pred HHHHHcCCCCCCCC
Q 002899 833 TLEIVSGKSNTNYR 846 (869)
Q Consensus 833 l~elltG~~p~~~~ 846 (869)
+|||++|+.||...
T Consensus 232 l~ell~g~~pf~~~ 245 (383)
T 3eb0_A 232 FGELILGKPLFSGE 245 (383)
T ss_dssp HHHHHHSSCSSCCS
T ss_pred HHHHHhCCCCCCCC
Confidence 99999999999753
No 190
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=3.3e-32 Score=298.95 Aligned_cols=192 Identities=21% Similarity=0.373 Sum_probs=169.0
Q ss_pred cCCCCCCeeeccCceEEEEEEE-cCCcEEEEEEecccCchhhHHHHHHHHHHHhcC-CCceeeEEeEEee--CceEEEEE
Q 002899 638 NNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQ-HPNLVKLYGCCVE--GNQLLLVY 713 (869)
Q Consensus 638 ~~f~~~~~IG~G~fG~Vyka~~-~~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~-H~nIv~l~~~~~~--~~~~~lV~ 713 (869)
++|++.+.||+|+||.||+|.. .+++.||||+++... .+.+.+|++++++++ ||||+++++++.+ ....++||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 6788999999999999999986 468999999987433 467899999999997 9999999999987 66789999
Q ss_pred EeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCC-cEEEeecCCceee
Q 002899 714 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDL-NAKISDFGLAKLY 792 (869)
Q Consensus 714 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~-~~kl~DFGla~~~ 792 (869)
||+++++|.+++. .+++..+..++.|+++||+|||+.+ |+||||||+|||++.++ .+||+|||+++..
T Consensus 113 e~~~~~~l~~~~~--------~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~ 181 (330)
T 3nsz_A 113 EHVNNTDFKQLYQ--------TLTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY 181 (330)
T ss_dssp ECCCCCCHHHHGG--------GCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred eccCchhHHHHHH--------hCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEcCCCCEEEEEeCCCceEc
Confidence 9999999988873 3788999999999999999999998 99999999999999776 8999999999876
Q ss_pred cCCCccccccccccccccchhhccc-CCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 793 EEDKTHISTRIAGTIGYMAPEYAMR-GYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 793 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
..... .....|++.|+|||++.. ..++.++|||||||++|||++|+.||..
T Consensus 182 ~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~ 233 (330)
T 3nsz_A 182 HPGQE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 233 (330)
T ss_dssp CTTCC--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred CCCCc--cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 54332 223468999999999876 6789999999999999999999999954
No 191
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.5e-32 Score=300.45 Aligned_cols=197 Identities=30% Similarity=0.470 Sum_probs=171.1
Q ss_pred CCCCCeeeccCceEEEEEEEc-----CCcEEEEEEecccCc-hhhHHHHHHHHHHHhcCCCceeeEEeEEee--CceEEE
Q 002899 640 FDPANKVGEGGFGSVYKGILS-----DGTVIAVKQLSSKSR-QGNREFVNEIGMISAQQHPNLVKLYGCCVE--GNQLLL 711 (869)
Q Consensus 640 f~~~~~IG~G~fG~Vyka~~~-----~g~~VAvK~~~~~~~-~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~--~~~~~l 711 (869)
|++.+.||+|+||.||++.+. +++.||||+++.... ...+.+.+|++++++++||||+++++++.+ ....++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 378899999999999998753 578999999976533 345678999999999999999999999987 467899
Q ss_pred EEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCcee
Q 002899 712 VYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKL 791 (869)
Q Consensus 712 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~ 791 (869)
||||+++|+|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++..
T Consensus 113 v~e~~~~~~L~~~l~~~------~~~~~~~~~i~~~l~~~l~~LH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 183 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRH------SIGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKA 183 (318)
T ss_dssp EECCCTTCBHHHHGGGS------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred EEecccCCcHHHHHhhC------CCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEEcCCCCEEECCcccccc
Confidence 99999999999998654 4899999999999999999999998 99999999999999999999999999987
Q ss_pred ecCCCcc--ccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 792 YEEDKTH--ISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 792 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
....... ......+|+.|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus 184 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~ 239 (318)
T 3lxp_A 184 VPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQS 239 (318)
T ss_dssp CCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGS
T ss_pred ccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccc
Confidence 7644321 22334578889999999988899999999999999999999999853
No 192
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1.3e-32 Score=307.68 Aligned_cols=197 Identities=24% Similarity=0.338 Sum_probs=162.5
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEeccc--CchhhHHHHHHHHHHHhcCCCceeeEEeEEeeCc------
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSK--SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGN------ 707 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~------ 707 (869)
.++|++.+.||+|+||.||+|... +++.||||++... .....+.+.+|+++++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 467889999999999999999975 6889999998653 2334567889999999999999999999998655
Q ss_pred eEEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecC
Q 002899 708 QLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFG 787 (869)
Q Consensus 708 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFG 787 (869)
..++||||+++ +|.+.+.. .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~-------~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg 172 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 172 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCCC
T ss_pred ceEEEEEcCCC-CHHHHHhh-------ccCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEEEee
Confidence 78999999985 67777742 4789999999999999999999998 9999999999999999999999999
Q ss_pred CceeecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 002899 788 LAKLYEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNYR 846 (869)
Q Consensus 788 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~ 846 (869)
+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 173 ~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 229 (371)
T 2xrw_A 173 LARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 229 (371)
T ss_dssp C------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccccccccc--ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 998664322 223457899999999999989999999999999999999999999653
No 193
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=2e-32 Score=305.35 Aligned_cols=201 Identities=25% Similarity=0.393 Sum_probs=172.2
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccC-chhhHHHHHHHHHHHhcCCCceeeEEeEEeeC-----ceE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEG-----NQL 709 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~-----~~~ 709 (869)
.++|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++.+++||||+++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 457889999999999999999975 68899999987543 33347789999999999999999999999765 368
Q ss_pred EEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCc
Q 002899 710 LLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLA 789 (869)
Q Consensus 710 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla 789 (869)
++||||++ |+|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 106 ~iv~e~~~-~~L~~~l~~~------~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a 175 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKTQ------HLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLA 175 (364)
T ss_dssp EEEEECCS-EEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEcccC-cCHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChHhEEECCCCCEEEEeCcce
Confidence 99999998 5898888543 5899999999999999999999998 999999999999999999999999999
Q ss_pred eeecCCCccc--cccccccccccchhhccc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCC
Q 002899 790 KLYEEDKTHI--STRIAGTIGYMAPEYAMR-GYLTSKADVYSFGVVTLEIVSGKSNTNYRP 847 (869)
Q Consensus 790 ~~~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~~ 847 (869)
.......... .....||+.|+|||++.. ..++.++|||||||++|||++|+.||....
T Consensus 176 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 236 (364)
T 3qyz_A 176 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236 (364)
T ss_dssp EECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred EecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCC
Confidence 8775432221 234579999999998654 558999999999999999999999996543
No 194
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.8e-32 Score=312.28 Aligned_cols=198 Identities=21% Similarity=0.313 Sum_probs=171.3
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCchhhHHHHHHHHHHHhc------CCCceeeEEeEEeeCceE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQ------QHPNLVKLYGCCVEGNQL 709 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l------~H~nIv~l~~~~~~~~~~ 709 (869)
..+|++.++||+|+||.||+|... +++.||||++... ....+.+.+|++++..+ +|+||+++++++...+..
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 457889999999999999999875 5889999999753 33356677888888776 577999999999999999
Q ss_pred EEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCc--EEEeecC
Q 002899 710 LLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLN--AKISDFG 787 (869)
Q Consensus 710 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~--~kl~DFG 787 (869)
++||||++ ++|.+++..... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++. +||+|||
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NILl~~~~~~~vkL~DFG 247 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNKF---QGFSLPLVRKFAHSILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFG 247 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTTT---CCCCHHHHHHHHHHHHHHHHHHHHHT---EECSCCSGGGEEESSTTSCCEEECCCT
T ss_pred EEEEeccC-CCHHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEccCCCcceEEeecc
Confidence 99999997 689888866532 25899999999999999999999998 999999999999999887 9999999
Q ss_pred CceeecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 002899 788 LAKLYEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNYR 846 (869)
Q Consensus 788 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~ 846 (869)
++....... ....||+.|+|||++.+..++.++|||||||++|||++|++||...
T Consensus 248 ~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 248 SSCYEHQRV----YTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp TCEETTCCC----CSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cceecCCcc----cccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 997654322 2357899999999999989999999999999999999999999653
No 195
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=4e-33 Score=306.76 Aligned_cols=212 Identities=29% Similarity=0.428 Sum_probs=178.5
Q ss_pred HHHHHhcCCCCCCeeeccCceEEEEEEEcC-C-----cEEEEEEecccCc-hhhHHHHHHHHHHHhc-CCCceeeEEeEE
Q 002899 632 QIKAATNNFDPANKVGEGGFGSVYKGILSD-G-----TVIAVKQLSSKSR-QGNREFVNEIGMISAQ-QHPNLVKLYGCC 703 (869)
Q Consensus 632 ~i~~~t~~f~~~~~IG~G~fG~Vyka~~~~-g-----~~VAvK~~~~~~~-~~~~~f~~E~~~l~~l-~H~nIv~l~~~~ 703 (869)
+++...++|++.+.||+|+||.||+|.... + +.||+|.+..... ...+.+.+|+++++++ +||||+++++++
T Consensus 40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 119 (333)
T 2i1m_A 40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC 119 (333)
T ss_dssp GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred cccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 344456789999999999999999999742 2 4799999976543 3456789999999999 899999999999
Q ss_pred eeCceEEEEEEeccCCchhhhhhcCCcc---------cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEE
Q 002899 704 VEGNQLLLVYEYMKNNCLSRAIFGKDTE---------YRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVL 774 (869)
Q Consensus 704 ~~~~~~~lV~E~~~~gsL~~~l~~~~~~---------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NIL 774 (869)
.+.+..++||||+++|+|.+++...... ....+++..+..++.|++.||+|||+++ |+||||||+|||
T Consensus 120 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl 196 (333)
T 2i1m_A 120 THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVL 196 (333)
T ss_dssp CSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGCE
T ss_pred ecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCcccceEE
Confidence 9999999999999999999988653210 1235799999999999999999999997 999999999999
Q ss_pred EcCCCcEEEeecCCceeecCCCcc-ccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHc-CCCCCCCC
Q 002899 775 LDKDLNAKISDFGLAKLYEEDKTH-ISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNYR 846 (869)
Q Consensus 775 l~~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~ 846 (869)
++.++.+||+|||++......... ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||...
T Consensus 197 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 270 (333)
T 2i1m_A 197 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI 270 (333)
T ss_dssp EEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred ECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCccc
Confidence 999999999999999866443321 2223457889999999998899999999999999999999 99998653
No 196
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1.2e-32 Score=294.48 Aligned_cols=199 Identities=27% Similarity=0.450 Sum_probs=166.8
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccC---chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLV 712 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 712 (869)
.++|.+.+.||+|+||.||+|... +++.||||++.... ......+.+|+++++.++||||+++++++...+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 357889999999999999999986 78999999986542 22345788999999999999999999999999999999
Q ss_pred EEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceee
Q 002899 713 YEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 792 (869)
Q Consensus 713 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~ 792 (869)
|||+++++|.+++.... .+++..+..++.|+++||+|||+.+ ++||||||+||+++.++.+||+|||++...
T Consensus 90 ~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~ 161 (276)
T 2h6d_A 90 MEYVSGGELFDYICKHG-----RVEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMM 161 (276)
T ss_dssp EECCCSCBHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHHC---SSCCCCCGGGEEECTTSCEEECCCCGGGCC
T ss_pred EeccCCCcHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChhhEEECCCCCEEEeeccccccc
Confidence 99999999999986542 5899999999999999999999998 999999999999999999999999999776
Q ss_pred cCCCccccccccccccccchhhcccCCC-CchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 793 EEDKTHISTRIAGTIGYMAPEYAMRGYL-TSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 793 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
..... .....|++.|+|||.+.+..+ +.++||||||+++|||++|+.||..
T Consensus 162 ~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~ 213 (276)
T 2h6d_A 162 SDGEF--LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDD 213 (276)
T ss_dssp CC---------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCCcc--eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCC
Confidence 54321 223468999999999987655 6899999999999999999999964
No 197
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=3.3e-32 Score=294.40 Aligned_cols=200 Identities=26% Similarity=0.413 Sum_probs=174.2
Q ss_pred HhcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccC---------chhhHHHHHHHHHHHhcC-CCceeeEEeEEe
Q 002899 636 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---------RQGNREFVNEIGMISAQQ-HPNLVKLYGCCV 704 (869)
Q Consensus 636 ~t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~---------~~~~~~f~~E~~~l~~l~-H~nIv~l~~~~~ 704 (869)
..++|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++.++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 3568899999999999999999985 68899999986542 122456789999999995 999999999999
Q ss_pred eCceEEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEe
Q 002899 705 EGNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKIS 784 (869)
Q Consensus 705 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~ 784 (869)
..+..++||||+++++|.+++... ..+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~ 166 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEK-----VTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLT 166 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEEC
T ss_pred cCCeEEEEEeccCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEcCCCcEEEe
Confidence 999999999999999999998653 26899999999999999999999998 9999999999999999999999
Q ss_pred ecCCceeecCCCccccccccccccccchhhcc------cCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 785 DFGLAKLYEEDKTHISTRIAGTIGYMAPEYAM------RGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 785 DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
|||++........ .....|++.|+|||++. ...++.++||||||+++|||++|+.||..
T Consensus 167 dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~ 231 (298)
T 1phk_A 167 DFGFSCQLDPGEK--LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH 231 (298)
T ss_dssp CCTTCEECCTTCC--BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cccchhhcCCCcc--cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcC
Confidence 9999987654322 23356899999999885 45678999999999999999999999854
No 198
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1.1e-33 Score=317.00 Aligned_cols=200 Identities=15% Similarity=0.156 Sum_probs=163.3
Q ss_pred hcCCCCCCeeeccCceEEEEEEE-cCCcEEEEEEeccc---CchhhHHHHHHH---HHHHhcCCCceeeEE-------eE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSK---SRQGNREFVNEI---GMISAQQHPNLVKLY-------GC 702 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~-~~g~~VAvK~~~~~---~~~~~~~f~~E~---~~l~~l~H~nIv~l~-------~~ 702 (869)
.++|.+.+.||+|+||.||+|+. .+|+.||||++... .....+.|.+|+ +++++++|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46688899999999999999996 46899999998743 334457788999 455566899999998 66
Q ss_pred EeeCc-----------------eEEEEEEeccCCchhhhhhcCCcc--cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 002899 703 CVEGN-----------------QLLLVYEYMKNNCLSRAIFGKDTE--YRLKLDWPTRKKICIGIARGLAYLHEDSRIKI 763 (869)
Q Consensus 703 ~~~~~-----------------~~~lV~E~~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i 763 (869)
+...+ ..++||||+ +|+|.+++...... ....+++..+..|+.||++||+|||+++ |
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---L 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT---E
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC---e
Confidence 65543 278999999 58999998653211 1123456888999999999999999998 9
Q ss_pred EEcCCCCCCEEEcCCCcEEEeecCCceeecCCCccccccccccccccchhhcccC-----------CCCchhHHHHHHHH
Q 002899 764 VHRDIKTSNVLLDKDLNAKISDFGLAKLYEEDKTHISTRIAGTIGYMAPEYAMRG-----------YLTSKADVYSFGVV 832 (869)
Q Consensus 764 iH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~k~DvwSlGvi 832 (869)
+||||||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||+
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i 302 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV 302 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence 9999999999999999999999999986432 2233567 999999999877 89999999999999
Q ss_pred HHHHHcCCCCCCC
Q 002899 833 TLEIVSGKSNTNY 845 (869)
Q Consensus 833 l~elltG~~p~~~ 845 (869)
+|||++|+.||..
T Consensus 303 l~elltg~~Pf~~ 315 (377)
T 3byv_A 303 IYWIWCADLPITK 315 (377)
T ss_dssp HHHHHHSSCCC--
T ss_pred HHHHHHCCCCCcc
Confidence 9999999999964
No 199
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=2e-32 Score=299.84 Aligned_cols=200 Identities=26% Similarity=0.410 Sum_probs=168.4
Q ss_pred HhcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCc--------hhhHHHHHHHHHHHhcCCCceeeEEeEEeeC
Q 002899 636 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR--------QGNREFVNEIGMISAQQHPNLVKLYGCCVEG 706 (869)
Q Consensus 636 ~t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~--------~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~ 706 (869)
..++|.+.+.||+|+||.||+|... +++.||||++..... .....+.+|++++++++||||+++++++..+
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 4567899999999999999999975 578999999865321 1234688999999999999999999998765
Q ss_pred ceEEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCc---EEE
Q 002899 707 NQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLN---AKI 783 (869)
Q Consensus 707 ~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~---~kl 783 (869)
+ .++||||+++++|.+++.... .+++..+..++.||++||+|||+++ |+||||||+|||++.++. +||
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl 158 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVGNK-----RLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKI 158 (322)
T ss_dssp S-EEEEEECCTTEETHHHHSTTC-----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSSSCCEEE
T ss_pred c-eEEEEecCCCCcHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEecCCCCCeEEE
Confidence 5 899999999999999886543 6899999999999999999999998 999999999999987654 999
Q ss_pred eecCCceeecCCCccccccccccccccchhhcc---cCCCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 002899 784 SDFGLAKLYEEDKTHISTRIAGTIGYMAPEYAM---RGYLTSKADVYSFGVVTLEIVSGKSNTNYR 846 (869)
Q Consensus 784 ~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~k~DvwSlGvil~elltG~~p~~~~ 846 (869)
+|||++....... ......||+.|+|||++. ...++.++||||||+++|||++|+.||...
T Consensus 159 ~Dfg~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 222 (322)
T 2ycf_A 159 TDFGHSKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 222 (322)
T ss_dssp CCCTTCEECCCCH--HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCST
T ss_pred ccCccceeccccc--ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence 9999998765322 222356899999999874 467899999999999999999999999653
No 200
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.5e-32 Score=299.54 Aligned_cols=199 Identities=27% Similarity=0.460 Sum_probs=163.0
Q ss_pred HHHHHHhcCCCCCCeeeccCceEEEEEEEcCCcEEEEEEecccCchhhHHHHHHHHHHHh--cCCCceeeEEeEEeeC--
Q 002899 631 RQIKAATNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISA--QQHPNLVKLYGCCVEG-- 706 (869)
Q Consensus 631 ~~i~~~t~~f~~~~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~--l~H~nIv~l~~~~~~~-- 706 (869)
..-....++|++.+.||+|+||.||+|+.. ++.||||++... ....+..|.+++.. ++||||+++++++...
T Consensus 30 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~ 105 (337)
T 3mdy_A 30 LVQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTG 105 (337)
T ss_dssp HHHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCG
T ss_pred ccccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCC
Confidence 333455678999999999999999999985 899999998543 23445556666655 4999999999999887
Q ss_pred --ceEEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcC-----CCCeEEcCCCCCCEEEcCCC
Q 002899 707 --NQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDS-----RIKIVHRDIKTSNVLLDKDL 779 (869)
Q Consensus 707 --~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----~~~iiH~Dlk~~NILl~~~~ 779 (869)
...++||||+++|+|.+++... .+++..+..++.|++.||+|||+.. .++|+||||||+|||++.++
T Consensus 106 ~~~~~~lv~e~~~~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~ 179 (337)
T 3mdy_A 106 SWTQLYLITDYHENGSLYDYLKST------TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNG 179 (337)
T ss_dssp GGCEEEEEECCCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTS
T ss_pred CCCceEEEEeccCCCcHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCC
Confidence 7899999999999999999653 5899999999999999999999871 11299999999999999999
Q ss_pred cEEEeecCCceeecCCCccc---cccccccccccchhhcccCCCCch------hHHHHHHHHHHHHHcC
Q 002899 780 NAKISDFGLAKLYEEDKTHI---STRIAGTIGYMAPEYAMRGYLTSK------ADVYSFGVVTLEIVSG 839 (869)
Q Consensus 780 ~~kl~DFGla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~k------~DvwSlGvil~elltG 839 (869)
.+||+|||++.......... .....||+.|+|||++.+.....+ +|||||||++|||++|
T Consensus 180 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg 248 (337)
T 3mdy_A 180 TCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARR 248 (337)
T ss_dssp CEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhc
Confidence 99999999998765433221 123578999999999987766554 9999999999999999
No 201
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=2.7e-32 Score=294.00 Aligned_cols=197 Identities=28% Similarity=0.469 Sum_probs=168.8
Q ss_pred CCCCCCeeeccCceEEEEEEEc-CCcEEEEEEeccc--CchhhHHHHHHHHHHHhcCCCceeeEEeEEee----CceEEE
Q 002899 639 NFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSK--SRQGNREFVNEIGMISAQQHPNLVKLYGCCVE----GNQLLL 711 (869)
Q Consensus 639 ~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~----~~~~~l 711 (869)
.|.+.+.||+|+||.||+|... ++..||+|++... .....+.+.+|++++++++||||+++++++.. ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 3667789999999999999975 5788999998654 23445678999999999999999999999875 456899
Q ss_pred EEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEc-CCCcEEEeecCCce
Q 002899 712 VYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLD-KDLNAKISDFGLAK 790 (869)
Q Consensus 712 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~-~~~~~kl~DFGla~ 790 (869)
||||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ .+|+||||||+|||++ .++.+||+|||++.
T Consensus 107 v~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~ 180 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRFK-----VMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp EEECCCSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred EEEecCCCCHHHHHHHcc-----CCCHHHHHHHHHHHHHHHHHHHcCC-CCEEECCCCHHHEEEECCCCCEEEeeCCCcc
Confidence 999999999999996532 5899999999999999999999875 3499999999999997 78999999999997
Q ss_pred eecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 791 LYEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 791 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
...... .....||+.|+|||++. +.++.++||||||+++|||++|+.||..
T Consensus 181 ~~~~~~---~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~ 231 (290)
T 1t4h_A 181 LKRASF---AKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSE 231 (290)
T ss_dssp GCCTTS---BEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cccccc---cccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCC
Confidence 554322 22356899999999876 4589999999999999999999999964
No 202
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=1.9e-32 Score=296.42 Aligned_cols=201 Identities=28% Similarity=0.486 Sum_probs=171.0
Q ss_pred cCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCc--hhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEEE
Q 002899 638 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR--QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 714 (869)
Q Consensus 638 ~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~--~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 714 (869)
++|++.+.||+|+||.||+|+.. +++.||||++..... .....+.+|++++++++||||+++++++..++..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 57888999999999999999976 689999999865432 234678899999999999999999999999999999999
Q ss_pred eccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeecC
Q 002899 715 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEE 794 (869)
Q Consensus 715 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~~ 794 (869)
|++ ++|.+++..... ..+++..+..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||++.....
T Consensus 83 ~~~-~~L~~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 155 (299)
T 2r3i_A 83 FLH-QDLKKFMDASAL---TGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGV 155 (299)
T ss_dssp CCS-EEHHHHHHHTTT---TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECSTTHHHHHCC
T ss_pred ccc-CCHHHHHHhhhc---cCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHeEEcCCCCEEECcchhhhhccC
Confidence 998 689988865432 25889999999999999999999998 99999999999999999999999999876643
Q ss_pred CCccccccccccccccchhhcccCC-CCchhHHHHHHHHHHHHHcCCCCCCCC
Q 002899 795 DKTHISTRIAGTIGYMAPEYAMRGY-LTSKADVYSFGVVTLEIVSGKSNTNYR 846 (869)
Q Consensus 795 ~~~~~~~~~~gt~~y~aPE~~~~~~-~~~k~DvwSlGvil~elltG~~p~~~~ 846 (869)
... ......+|+.|+|||++.+.. ++.++||||||+++|||++|+.||...
T Consensus 156 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 207 (299)
T 2r3i_A 156 PVR-TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207 (299)
T ss_dssp CSB-CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred Ccc-ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCc
Confidence 322 122346899999999988764 799999999999999999999999653
No 203
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=5.6e-33 Score=309.74 Aligned_cols=196 Identities=29% Similarity=0.436 Sum_probs=154.1
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEeccc--CchhhHHHHHHHHHHHhcCCCceeeEEeEEeeC------c
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSK--SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEG------N 707 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~------~ 707 (869)
.++|++.+.||+|+||.||+|... +|+.||||++... .....+.+.+|+++++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 468889999999999999999964 6899999998654 233456788999999999999999999998754 5
Q ss_pred eEEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecC
Q 002899 708 QLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFG 787 (869)
Q Consensus 708 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFG 787 (869)
..++||||+ +++|.+++... .+++..+..++.||++||+|||+.+ |+||||||+|||++.++.+||+|||
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~~------~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kL~DFG 177 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKCQ------KLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFG 177 (367)
T ss_dssp CCEEEEECC-CEECC-----C------CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC--
T ss_pred eEEEEeccc-CCCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHhhEEECCCCCEEEeecc
Confidence 679999998 68898887542 5899999999999999999999998 9999999999999999999999999
Q ss_pred CceeecCCCccccccccccccccchhhccc-CCCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 002899 788 LAKLYEEDKTHISTRIAGTIGYMAPEYAMR-GYLTSKADVYSFGVVTLEIVSGKSNTNYR 846 (869)
Q Consensus 788 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~ 846 (869)
+++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||...
T Consensus 178 ~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 233 (367)
T 2fst_X 178 LARHTADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 233 (367)
T ss_dssp -----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 99865432 223578999999999876 67899999999999999999999999653
No 204
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.6e-33 Score=308.83 Aligned_cols=200 Identities=30% Similarity=0.453 Sum_probs=159.8
Q ss_pred CCCCCCeeeccCceEEEEEEEc--CC--cEEEEEEecccC-chhhHHHHHHHHHHHhcCCCceeeEEeEEee-CceEEEE
Q 002899 639 NFDPANKVGEGGFGSVYKGILS--DG--TVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVE-GNQLLLV 712 (869)
Q Consensus 639 ~f~~~~~IG~G~fG~Vyka~~~--~g--~~VAvK~~~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~-~~~~~lV 712 (869)
.|++.++||+|+||.||+|.+. ++ ..||||.++... ....++|.+|++++++++||||+++++++.+ ++..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 3566789999999999999864 22 368999986543 3446789999999999999999999998764 5578999
Q ss_pred EEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceee
Q 002899 713 YEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 792 (869)
Q Consensus 713 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~ 792 (869)
|||+++|+|.+++.... ..+++..+..++.||++||+|||+++ |+||||||+|||++.++.+||+|||+++..
T Consensus 170 ~e~~~~g~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~ 242 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNET----HNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDM 242 (373)
T ss_dssp EECCTTCBHHHHHHCTT----CCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC------
T ss_pred EECCCCCCHHHHHhhcc----cCCCHHHHHHHHHHHHHHHHHHHHCC---EecCccchheEEECCCCCEEEeeccccccc
Confidence 99999999999996543 25789999999999999999999998 999999999999999999999999999866
Q ss_pred cCCCcc---ccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHc-CCCCCCC
Q 002899 793 EEDKTH---ISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNY 845 (869)
Q Consensus 793 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~ 845 (869)
...... ......+|+.|+|||++....++.++||||||+++|||++ |++||..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~ 299 (373)
T 3c1x_A 243 YDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 299 (373)
T ss_dssp ---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTT
T ss_pred cccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCC
Confidence 432211 1223457789999999999999999999999999999999 6777754
No 205
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=6.1e-33 Score=297.12 Aligned_cols=207 Identities=27% Similarity=0.451 Sum_probs=172.4
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccC--chhhHHHHHHHHHHHhcCCCceeeEEeEEee--CceEEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVE--GNQLLL 711 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~--~~~~~l 711 (869)
.++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.. .+..++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 467889999999999999999975 68999999987543 3345678999999999999999999998854 568899
Q ss_pred EEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcC--CCCeEEcCCCCCCEEEcCCCcEEEeecCCc
Q 002899 712 VYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDS--RIKIVHRDIKTSNVLLDKDLNAKISDFGLA 789 (869)
Q Consensus 712 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~iiH~Dlk~~NILl~~~~~~kl~DFGla 789 (869)
||||+++++|.+++.... .....+++..+..++.|++.||+|||+.+ ..+|+||||||+||+++.++.+||+|||++
T Consensus 85 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~ 163 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGT-KERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163 (279)
T ss_dssp EEECCTTEEHHHHHHHHH-HTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHH
T ss_pred EEeCCCCCCHHHHHHhhc-ccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchh
Confidence 999999999999986532 12235899999999999999999999875 133999999999999999999999999999
Q ss_pred eeecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 790 KLYEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 790 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
........ ......|++.|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus 164 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 218 (279)
T 2w5a_A 164 RILNHDTS-FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTA 218 (279)
T ss_dssp HHC---CH-HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred eeeccccc-cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcc
Confidence 77654322 12234689999999999988999999999999999999999999965
No 206
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.98 E-value=2.8e-32 Score=296.91 Aligned_cols=203 Identities=28% Similarity=0.443 Sum_probs=164.3
Q ss_pred cCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEeccc---CchhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEE
Q 002899 638 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSK---SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 713 (869)
Q Consensus 638 ~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~---~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 713 (869)
++|++.+.||+|+||.||+|... +++.||||++... ......++.+|++++++++||||+++++++...+..++||
T Consensus 32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 111 (310)
T 2wqm_A 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 111 (310)
T ss_dssp GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence 46888999999999999999974 7899999998753 2334567899999999999999999999999999999999
Q ss_pred EeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeec
Q 002899 714 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 793 (869)
Q Consensus 714 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~ 793 (869)
||+++++|.+++.... .....+++..+..++.|+++||+|||+.+ ++||||||+||+++.++.+||+|||++....
T Consensus 112 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 112 ELADAGDLSRMIKHFK-KQKRLIPERTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp ECCCSCBHHHHHHHHH-HTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred ecCCCCCHHHHHHHhc-ccccCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 9999999999886421 11236899999999999999999999998 9999999999999999999999999988665
Q ss_pred CCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 794 EDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 794 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
.... ......|++.|+|||++....++.++||||||+++|||++|+.||..
T Consensus 188 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 238 (310)
T 2wqm_A 188 SKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYG 238 (310)
T ss_dssp ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC-
T ss_pred CCCc-cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcc
Confidence 4322 12235689999999999998999999999999999999999999964
No 207
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.98 E-value=1.1e-32 Score=300.97 Aligned_cols=204 Identities=25% Similarity=0.339 Sum_probs=171.3
Q ss_pred hcCCCCCCeeeccCceEEEEEEE-cCCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCceeeEEeEEee----CceEEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVE----GNQLLL 711 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~-~~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~----~~~~~l 711 (869)
.++|++.+.||+|+||.||+|.. .+++.||||++........+.+.+|+++++.++||||+++++++.. ....++
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 46788999999999999999997 4789999999877666667789999999999999999999999873 447899
Q ss_pred EEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCcee
Q 002899 712 VYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKL 791 (869)
Q Consensus 712 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~ 791 (869)
||||+++|+|.+++..... ....+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||++..
T Consensus 108 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~dfg~~~~ 183 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKD-KGNFLTEDQILWLLLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQ 183 (317)
T ss_dssp EEECCTTCBHHHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred EEEeCCCCcHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCCEEEEecCcchh
Confidence 9999999999998865311 1236899999999999999999999997 99999999999999999999999999876
Q ss_pred ecCCCcc--------ccccccccccccchhhcccCC---CCchhHHHHHHHHHHHHHcCCCCCC
Q 002899 792 YEEDKTH--------ISTRIAGTIGYMAPEYAMRGY---LTSKADVYSFGVVTLEIVSGKSNTN 844 (869)
Q Consensus 792 ~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~---~~~k~DvwSlGvil~elltG~~p~~ 844 (869)
....... ......||+.|+|||++.... ++.++||||||+++|||++|+.||.
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~ 247 (317)
T 2buj_A 184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD 247 (317)
T ss_dssp SCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTH
T ss_pred cccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChh
Confidence 5321110 011245799999999987543 6889999999999999999999984
No 208
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.98 E-value=1.3e-32 Score=302.03 Aligned_cols=201 Identities=30% Similarity=0.496 Sum_probs=174.6
Q ss_pred hcCCCCCCeeeccCceEEEEEEE-----cCCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCceeeEEeEEeeCc--eE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGIL-----SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGN--QL 709 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~-----~~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~--~~ 709 (869)
.++|++.+.||+|+||.||+|+. .+++.||||++........+.+.+|++++++++||||+++++++...+ ..
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 34678889999999999999984 368899999998776666778999999999999999999999987654 68
Q ss_pred EEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCc
Q 002899 710 LLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLA 789 (869)
Q Consensus 710 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla 789 (869)
++||||+++++|.+++.... ..+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++
T Consensus 120 ~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kL~Dfg~~ 192 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLT 192 (326)
T ss_dssp EEEECCCTTCBHHHHHHHST----TSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTC
T ss_pred EEEEECCCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCCCcceEEEcCCCcEEEecCcch
Confidence 99999999999999997643 25899999999999999999999997 999999999999999999999999999
Q ss_pred eeecCCCcc--ccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCC
Q 002899 790 KLYEEDKTH--ISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTN 844 (869)
Q Consensus 790 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~ 844 (869)
......... ......++..|+|||++.+..++.++||||||+++|||++|+.|+.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~ 249 (326)
T 2w1i_A 193 KVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 249 (326)
T ss_dssp EECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGG
T ss_pred hhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCC
Confidence 877544321 1223456778999999998889999999999999999999998875
No 209
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.98 E-value=3.2e-32 Score=296.85 Aligned_cols=200 Identities=33% Similarity=0.517 Sum_probs=171.6
Q ss_pred HhcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEEE
Q 002899 636 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 714 (869)
Q Consensus 636 ~t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 714 (869)
..++|++.+.||+|+||.||+|... +|+.||||++.... ...++.+|++++++++||||+++++++...+..++|||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 104 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME 104 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence 4567899999999999999999976 58999999987543 35678999999999999999999999999999999999
Q ss_pred eccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeecC
Q 002899 715 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEE 794 (869)
Q Consensus 715 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~~ 794 (869)
|+++++|.+++.... ..+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++.....
T Consensus 105 ~~~~~~L~~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 177 (314)
T 3com_A 105 YCGAGSVSDIIRLRN----KTLTEDEIATILQSTLKGLEYLHFMR---KIHRDIKAGNILLNTEGHAKLADFGVAGQLTD 177 (314)
T ss_dssp CCTTEEHHHHHHHHT----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECBT
T ss_pred cCCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCcCHHHEEECCCCCEEEeecccchhhhh
Confidence 999999999886322 26899999999999999999999998 99999999999999999999999999987654
Q ss_pred CCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 795 DKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 795 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
... ......|++.|+|||++....++.++||||||+++|||++|+.||..
T Consensus 178 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 227 (314)
T 3com_A 178 TMA-KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYAD 227 (314)
T ss_dssp TBS-CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTT
T ss_pred hcc-ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCC
Confidence 322 12335689999999999988899999999999999999999999964
No 210
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.98 E-value=1.8e-32 Score=295.64 Aligned_cols=200 Identities=30% Similarity=0.439 Sum_probs=169.3
Q ss_pred hcCCCCCC-eeeccCceEEEEEEEc---CCcEEEEEEecccC--chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEE
Q 002899 637 TNNFDPAN-KVGEGGFGSVYKGILS---DGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLL 710 (869)
Q Consensus 637 t~~f~~~~-~IG~G~fG~Vyka~~~---~g~~VAvK~~~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 710 (869)
.++|.+.+ .||+|+||.||+|... +++.||||+++... ....+++.+|+++++.++||||+++++++ ..+..+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 35677777 9999999999999653 46789999987553 22356799999999999999999999999 567789
Q ss_pred EEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCce
Q 002899 711 LVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAK 790 (869)
Q Consensus 711 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~ 790 (869)
+||||+++++|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++.
T Consensus 94 lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 165 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQNR-----HVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSK 165 (291)
T ss_dssp EEEECCTTEEHHHHHHHCT-----TCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred EEEEeCCCCCHHHHHHhCc-----CCCHHHHHHHHHHHHHHHHHHHhCC---eEcCCCCcceEEEeCCCcEEEccCCcce
Confidence 9999999999999997643 5899999999999999999999998 9999999999999999999999999998
Q ss_pred eecCCCccc--cccccccccccchhhcccCCCCchhHHHHHHHHHHHHHc-CCCCCCC
Q 002899 791 LYEEDKTHI--STRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNY 845 (869)
Q Consensus 791 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~ 845 (869)
......... .....+++.|+|||++....++.++||||||+++|||++ |+.||..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~ 223 (291)
T 1xbb_A 166 ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 223 (291)
T ss_dssp ECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred eeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCC
Confidence 775443321 122346789999999998889999999999999999999 9999965
No 211
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.98 E-value=1.8e-32 Score=298.84 Aligned_cols=210 Identities=27% Similarity=0.415 Sum_probs=164.8
Q ss_pred HHHhcCCCCCCeeeccCceEEEEEEEc----CCcEEEEEEecccC--chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCc
Q 002899 634 KAATNNFDPANKVGEGGFGSVYKGILS----DGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGN 707 (869)
Q Consensus 634 ~~~t~~f~~~~~IG~G~fG~Vyka~~~----~g~~VAvK~~~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~ 707 (869)
....++|.+.+.||+|+||.||+|... .++.||||+++... ....+.+.+|++++++++||||+++++++.+.+
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 109 (313)
T 3brb_A 30 VIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMS 109 (313)
T ss_dssp BCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC--
T ss_pred ccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecc
Confidence 334567888999999999999999864 34589999987543 334567899999999999999999999998755
Q ss_pred e-----EEEEEEeccCCchhhhhhcCCc-ccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcE
Q 002899 708 Q-----LLLVYEYMKNNCLSRAIFGKDT-EYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNA 781 (869)
Q Consensus 708 ~-----~~lV~E~~~~gsL~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~ 781 (869)
. .++||||+++|+|.+++..... .....+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+
T Consensus 110 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~ 186 (313)
T 3brb_A 110 SQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN---FLHRDLAARNCMLRDDMTV 186 (313)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCSGGGEEECTTSCE
T ss_pred ccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcE
Confidence 3 4999999999999998854321 12246899999999999999999999997 9999999999999999999
Q ss_pred EEeecCCceeecCCCc-cccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHc-CCCCCCCC
Q 002899 782 KISDFGLAKLYEEDKT-HISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNYR 846 (869)
Q Consensus 782 kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~ 846 (869)
||+|||++........ .......+++.|+|||.+.+..++.++||||||+++|||++ |+.||...
T Consensus 187 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~ 253 (313)
T 3brb_A 187 CVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGV 253 (313)
T ss_dssp EECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred EEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccC
Confidence 9999999987644322 11223457889999999999999999999999999999999 88888653
No 212
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.98 E-value=8.1e-33 Score=299.79 Aligned_cols=201 Identities=26% Similarity=0.488 Sum_probs=170.1
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEEEe
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEY 715 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~ 715 (869)
.++|++.+.||+|+||.||+|... +++.||+|++..........+.+|+++++.++||||+++++++..++..++||||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 97 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF 97 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence 467889999999999999999986 5889999999876666678899999999999999999999999999999999999
Q ss_pred ccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeecCC
Q 002899 716 MKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEED 795 (869)
Q Consensus 716 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~ 795 (869)
+++++|.+++.... ..+++..+..++.|+++||+|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 98 ~~~~~l~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 170 (302)
T 2j7t_A 98 CPGGAVDAIMLELD----RGLTEPQIQVVCRQMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT 170 (302)
T ss_dssp CTTEEHHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH
T ss_pred CCCCcHHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEECCCCCEEEEECCCCcccccc
Confidence 99999998886532 25899999999999999999999998 999999999999999999999999987543221
Q ss_pred Cccccccccccccccchhhcc-----cCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 796 KTHISTRIAGTIGYMAPEYAM-----RGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 796 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
. .......||+.|+|||++. ...++.++||||||+++|||++|+.||..
T Consensus 171 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 224 (302)
T 2j7t_A 171 L-QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHE 224 (302)
T ss_dssp H-HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred c-cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCcc
Confidence 1 1112346899999999983 56789999999999999999999999864
No 213
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.98 E-value=1.6e-32 Score=303.94 Aligned_cols=200 Identities=23% Similarity=0.395 Sum_probs=174.4
Q ss_pred hcCCCCCCeeeccCceEEEEEEEcCCcEEEEEEecccCchh-----------------hHHHHHHHHHHHhcCCCceeeE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQG-----------------NREFVNEIGMISAQQHPNLVKL 699 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~~~~-----------------~~~f~~E~~~l~~l~H~nIv~l 699 (869)
.++|.+.+.||+|+||.||+|.. +++.||||++....... ...+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46788999999999999999999 89999999986542211 1789999999999999999999
Q ss_pred EeEEeeCceEEEEEEeccCCchhhh------hhcCCcccccCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEEcCCCCCC
Q 002899 700 YGCCVEGNQLLLVYEYMKNNCLSRA------IFGKDTEYRLKLDWPTRKKICIGIARGLAYLHE-DSRIKIVHRDIKTSN 772 (869)
Q Consensus 700 ~~~~~~~~~~~lV~E~~~~gsL~~~------l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~iiH~Dlk~~N 772 (869)
++++.+.+..++||||+++|+|.++ +... ....+++..+..++.|++.||+|||+ .+ |+||||||+|
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dl~p~N 182 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKN---YTCFIPIQVIKCIIKSVLNSFSYIHNEKN---ICHRDVKPSN 182 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSS---SCCCCCHHHHHHHHHHHHHHHHHHHHTSC---EECCCCCGGG
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhc---cccCCCHHHHHHHHHHHHHHHHHHhccCC---EeecCCChHh
Confidence 9999999999999999999999998 5432 12478999999999999999999998 77 9999999999
Q ss_pred EEEcCCCcEEEeecCCceeecCCCccccccccccccccchhhcccC-CCCc-hhHHHHHHHHHHHHHcCCCCCCCC
Q 002899 773 VLLDKDLNAKISDFGLAKLYEEDKTHISTRIAGTIGYMAPEYAMRG-YLTS-KADVYSFGVVTLEIVSGKSNTNYR 846 (869)
Q Consensus 773 ILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-k~DvwSlGvil~elltG~~p~~~~ 846 (869)
|+++.++.+||+|||++...... ......|++.|+|||++.+. .++. ++||||||+++|||++|+.||...
T Consensus 183 il~~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 255 (348)
T 2pml_X 183 ILMDKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLK 255 (348)
T ss_dssp EEECTTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred EEEcCCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 99999999999999999876543 22345689999999999876 5666 999999999999999999999753
No 214
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.98 E-value=3.4e-32 Score=298.26 Aligned_cols=202 Identities=27% Similarity=0.473 Sum_probs=171.0
Q ss_pred HhcCCCCCCeeeccCceEEEEEEE--cCCcEEEEEEecccCc--hhhHHHHHHHHHHHhc---CCCceeeEEeEEe----
Q 002899 636 ATNNFDPANKVGEGGFGSVYKGIL--SDGTVIAVKQLSSKSR--QGNREFVNEIGMISAQ---QHPNLVKLYGCCV---- 704 (869)
Q Consensus 636 ~t~~f~~~~~IG~G~fG~Vyka~~--~~g~~VAvK~~~~~~~--~~~~~f~~E~~~l~~l---~H~nIv~l~~~~~---- 704 (869)
+.++|++.+.||+|+||.||+|.. .+++.||+|++..... .....+.+|+++++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 457899999999999999999997 3678999999865432 2234567777777665 8999999999987
Q ss_pred -eCceEEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEE
Q 002899 705 -EGNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKI 783 (869)
Q Consensus 705 -~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl 783 (869)
.....++||||++ |+|.+++..... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~g---i~H~dlkp~Nili~~~~~~kl 161 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPE---PGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKL 161 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCT---TCSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEE
T ss_pred CCCceEEEEEecCC-CCHHHHHHhccc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHHHeEEcCCCCEEE
Confidence 5567899999998 699998865432 25899999999999999999999998 999999999999999999999
Q ss_pred eecCCceeecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 002899 784 SDFGLAKLYEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNYR 846 (869)
Q Consensus 784 ~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~ 846 (869)
+|||++....... ......||+.|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 162 ~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 222 (326)
T 1blx_A 162 ADFGLARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGS 222 (326)
T ss_dssp CSCCSCCCCCGGG--GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ecCcccccccCCC--CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCC
Confidence 9999998664322 223456899999999999889999999999999999999999999653
No 215
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.98 E-value=1.3e-32 Score=327.70 Aligned_cols=194 Identities=30% Similarity=0.444 Sum_probs=163.9
Q ss_pred CeeeccCceEEEEEEEc---CCcEEEEEEecccCc--hhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEEEeccC
Q 002899 644 NKVGEGGFGSVYKGILS---DGTVIAVKQLSSKSR--QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYMKN 718 (869)
Q Consensus 644 ~~IG~G~fG~Vyka~~~---~g~~VAvK~~~~~~~--~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~~~~ 718 (869)
+.||+|+||.||+|.+. .++.||||+++.... ...++|.+|++++++++|||||++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999763 467899999976432 335789999999999999999999999864 568899999999
Q ss_pred CchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeecCCCcc
Q 002899 719 NCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEEDKTH 798 (869)
Q Consensus 719 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~~~ 798 (869)
|+|.+++.... .+++..+..|+.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.+......
T Consensus 454 g~L~~~l~~~~-----~l~~~~~~~i~~qi~~~L~yLH~~~---iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 525 (635)
T 4fl3_A 454 GPLNKYLQQNR-----HVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 525 (635)
T ss_dssp EEHHHHHHHCT-----TCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----
T ss_pred CCHHHHHhhCC-----CCCHHHHHHHHHHHHHHHHHHHHCC---EeCCCCChHhEEEeCCCCEEEEEcCCccccccCccc
Confidence 99999996543 6899999999999999999999998 999999999999999999999999999876543321
Q ss_pred --ccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHc-CCCCCCCC
Q 002899 799 --ISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNYR 846 (869)
Q Consensus 799 --~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~ 846 (869)
......+|+.|+|||++....++.++|||||||++|||++ |+.||...
T Consensus 526 ~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~ 576 (635)
T 4fl3_A 526 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 576 (635)
T ss_dssp ---------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred cccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 1223456789999999999999999999999999999998 99999653
No 216
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.98 E-value=2.7e-32 Score=295.15 Aligned_cols=201 Identities=30% Similarity=0.447 Sum_probs=167.3
Q ss_pred cCCCCCCeeeccCceEEEEEEEcC----CcEEEEEEecccC-chhhHHHHHHHHHHHhcCCCceeeEEeEEee-CceEEE
Q 002899 638 NNFDPANKVGEGGFGSVYKGILSD----GTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVE-GNQLLL 711 (869)
Q Consensus 638 ~~f~~~~~IG~G~fG~Vyka~~~~----g~~VAvK~~~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~-~~~~~l 711 (869)
.+|++.++||+|+||.||+|...+ ...||+|.+.... ....+.+.+|++++++++||||+++++++.+ ++..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 457788999999999999998642 2368999987543 3345678999999999999999999998654 567899
Q ss_pred EEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCcee
Q 002899 712 VYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKL 791 (869)
Q Consensus 712 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~ 791 (869)
||||+++|+|.+++.... ..+++..+..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||++..
T Consensus 105 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~ql~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~a~~ 177 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNET----HNPTVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARD 177 (298)
T ss_dssp EEECCTTCBHHHHHHCTT----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECSCGGGCC
T ss_pred EEeCCCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEECCCCCEEECccccccc
Confidence 999999999999996543 25799999999999999999999998 99999999999999999999999999987
Q ss_pred ecCCCc---cccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHc-CCCCCCC
Q 002899 792 YEEDKT---HISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNY 845 (869)
Q Consensus 792 ~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~ 845 (869)
...... .......+|+.|+|||.+.+..++.++||||||+++|||++ |.+||..
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~ 235 (298)
T 3f66_A 178 MYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 235 (298)
T ss_dssp CSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred ccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCcc
Confidence 644321 11223457889999999999999999999999999999999 5555543
No 217
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.98 E-value=1.9e-32 Score=308.69 Aligned_cols=199 Identities=27% Similarity=0.388 Sum_probs=164.0
Q ss_pred hcCCCCCCeeeccCceEEEEEEEcCCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCceeeEEeEEeeCce------EE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQ------LL 710 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~------~~ 710 (869)
..+|.+.++||+|+||.||+|+...+..||+|++..... ...+|+++++.++||||+++++++...+. .+
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 346888999999999999999998777799998754322 22369999999999999999999965443 78
Q ss_pred EEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEc-CCCcEEEeecCCc
Q 002899 711 LVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLD-KDLNAKISDFGLA 789 (869)
Q Consensus 711 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~-~~~~~kl~DFGla 789 (869)
+||||++++.+....... .....+++..+..++.||++||+|||+.+ |+||||||+|||++ .++.+||+|||++
T Consensus 115 lv~e~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~kL~DFG~a 189 (394)
T 4e7w_A 115 LVLEYVPETVYRASRHYA--KLKQTMPMLLIKLYMYQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSA 189 (394)
T ss_dssp EEEECCSEEHHHHHHHHH--HTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred EEeeccCccHHHHHHHHH--hhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEcCCCCcEEEeeCCCc
Confidence 999999976444332211 11236899999999999999999999998 99999999999999 7999999999999
Q ss_pred eeecCCCccccccccccccccchhhcccC-CCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 002899 790 KLYEEDKTHISTRIAGTIGYMAPEYAMRG-YLTSKADVYSFGVVTLEIVSGKSNTNYR 846 (869)
Q Consensus 790 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~ 846 (869)
+....... .....||+.|+|||++.+. .++.++||||+||++|||++|+.||...
T Consensus 190 ~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 245 (394)
T 4e7w_A 190 KILIAGEP--NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGE 245 (394)
T ss_dssp EECCTTCC--CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccccCCCC--CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 87754332 2345789999999998764 5899999999999999999999999753
No 218
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.98 E-value=3.4e-32 Score=309.21 Aligned_cols=209 Identities=28% Similarity=0.361 Sum_probs=166.9
Q ss_pred cCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCceeeEEeEEeeC------ceEE
Q 002899 638 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEG------NQLL 710 (869)
Q Consensus 638 ~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~------~~~~ 710 (869)
.+|++.++||+|+||.||+|+.. +++.||||++.... +.+.+|+++++.++|||||++++++... ...+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 45788899999999999999985 58999999986432 2334799999999999999999998642 2367
Q ss_pred EEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCC-CcEEEeecCCc
Q 002899 711 LVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKD-LNAKISDFGLA 789 (869)
Q Consensus 711 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~-~~~kl~DFGla 789 (869)
+||||+++ ++.+.+.... .....+++..+..++.||++||+|||+.+ |+||||||+|||++.+ +.+||+|||++
T Consensus 130 lv~e~~~~-~l~~~~~~~~-~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NILl~~~~~~~kl~DFG~a 204 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYS-RAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSA 204 (420)
T ss_dssp EEEECCCE-EHHHHHHHHH-HTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred eehhcccc-cHHHHHHHHh-hccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChhhEEEeCCCCeEEeccchhh
Confidence 99999986 5655543211 11236899999999999999999999987 9999999999999965 67899999999
Q ss_pred eeecCCCccccccccccccccchhhcccC-CCCchhHHHHHHHHHHHHHcCCCCCCCCCCcchhhHHHHHH
Q 002899 790 KLYEEDKTHISTRIAGTIGYMAPEYAMRG-YLTSKADVYSFGVVTLEIVSGKSNTNYRPNEDFVYLLDWAY 859 (869)
Q Consensus 790 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~~~~~~~~l~~w~~ 859 (869)
+....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||.... +...+.+.+.
T Consensus 205 ~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~--~~~~l~~i~~ 271 (420)
T 1j1b_A 205 KQLVRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS--GVDQLVEIIK 271 (420)
T ss_dssp EECCTTCC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHH
T ss_pred hhcccCCC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHH
Confidence 87654332 2235789999999998764 78999999999999999999999996532 3334444443
No 219
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.98 E-value=2.3e-32 Score=299.98 Aligned_cols=203 Identities=30% Similarity=0.472 Sum_probs=169.8
Q ss_pred cCCCCCCeeeccCceEEEEEEEc-CCcE--EEEEEeccc-CchhhHHHHHHHHHHHhc-CCCceeeEEeEEeeCceEEEE
Q 002899 638 NNFDPANKVGEGGFGSVYKGILS-DGTV--IAVKQLSSK-SRQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQLLLV 712 (869)
Q Consensus 638 ~~f~~~~~IG~G~fG~Vyka~~~-~g~~--VAvK~~~~~-~~~~~~~f~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV 712 (869)
++|++.+.||+|+||.||+|+.. ++.. ||+|.++.. .....+.+.+|++++.++ +||||+++++++.+.+..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 57888999999999999999965 5654 499988653 233456789999999999 999999999999999999999
Q ss_pred EEeccCCchhhhhhcCCc-----------ccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcE
Q 002899 713 YEYMKNNCLSRAIFGKDT-----------EYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNA 781 (869)
Q Consensus 713 ~E~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~ 781 (869)
|||+++|+|.+++..... .....+++..+..++.|+++||+|||+++ |+||||||+|||++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCccceEEEcCCCeE
Confidence 999999999999976531 12236899999999999999999999998 9999999999999999999
Q ss_pred EEeecCCceeecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHc-CCCCCCC
Q 002899 782 KISDFGLAKLYEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNY 845 (869)
Q Consensus 782 kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~ 845 (869)
||+|||+++...... ......+++.|+|||++....++.++||||||+++|||++ |+.||..
T Consensus 182 kL~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~ 244 (327)
T 1fvr_A 182 KIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG 244 (327)
T ss_dssp EECCTTCEESSCEEC--CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred EEcccCcCccccccc--cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCC
Confidence 999999987433211 1122356789999999998889999999999999999998 9999954
No 220
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.98 E-value=9.2e-33 Score=306.54 Aligned_cols=197 Identities=16% Similarity=0.237 Sum_probs=169.5
Q ss_pred cCCCCCCeeeccCceEEEEEEEcC---------CcEEEEEEecccCchhhHHHHHHHHHHHhcCCCceee----------
Q 002899 638 NNFDPANKVGEGGFGSVYKGILSD---------GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVK---------- 698 (869)
Q Consensus 638 ~~f~~~~~IG~G~fG~Vyka~~~~---------g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~---------- 698 (869)
++|.+.+.||+|+||.||+|+... ++.||||++... ..+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 578899999999999999999763 788999998643 46889999999999999987
Q ss_pred -----EEeEEee-CceEEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCC
Q 002899 699 -----LYGCCVE-GNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSN 772 (869)
Q Consensus 699 -----l~~~~~~-~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~N 772 (869)
+++++.. ++..++||||+ +++|.+++.... ...+++..+..++.||++||+|||+++ |+||||||+|
T Consensus 117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~N 189 (352)
T 2jii_A 117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP---KHVLSERSVLQVACRLLDALEFLHENE---YVHGNVTAEN 189 (352)
T ss_dssp CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG---GGCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCGGG
T ss_pred cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC---cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHH
Confidence 6777776 67889999999 999999997642 236899999999999999999999998 9999999999
Q ss_pred EEEcCCC--cEEEeecCCceeecCCCcc------ccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCC
Q 002899 773 VLLDKDL--NAKISDFGLAKLYEEDKTH------ISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTN 844 (869)
Q Consensus 773 ILl~~~~--~~kl~DFGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~ 844 (869)
||++.++ .+||+|||+++.+...... ......||+.|+|||++.+..++.++||||||+++|||++|+.||.
T Consensus 190 Il~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~ 269 (352)
T 2jii_A 190 IFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWT 269 (352)
T ss_dssp EEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTG
T ss_pred EEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence 9999998 8999999999876543211 1123578999999999999899999999999999999999999997
Q ss_pred CC
Q 002899 845 YR 846 (869)
Q Consensus 845 ~~ 846 (869)
..
T Consensus 270 ~~ 271 (352)
T 2jii_A 270 NC 271 (352)
T ss_dssp GG
T ss_pred cC
Confidence 53
No 221
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.98 E-value=2.7e-32 Score=297.88 Aligned_cols=200 Identities=26% Similarity=0.396 Sum_probs=165.1
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCceeeEEeEEe-----------
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCV----------- 704 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~----------- 704 (869)
.++|.+.+.||+|+||.||+|... +++.||||++........+++.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 367889999999999999999986 48999999998766666788999999999999999999999874
Q ss_pred ---eCceEEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEc-CCCc
Q 002899 705 ---EGNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLD-KDLN 780 (869)
Q Consensus 705 ---~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~-~~~~ 780 (869)
+.+..++||||++ |+|.+++... .+++..+..++.|+++||+|||+++ |+||||||+|||++ +++.
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~ 159 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQG------PLLEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLV 159 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTTC------CCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTTE
T ss_pred cccccCceeEEeeccC-CCHHHHhhcC------CccHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCe
Confidence 3467899999998 6999988542 5889999999999999999999998 99999999999997 5679
Q ss_pred EEEeecCCceeecCCCc--cccccccccccccchhhccc-CCCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 002899 781 AKISDFGLAKLYEEDKT--HISTRIAGTIGYMAPEYAMR-GYLTSKADVYSFGVVTLEIVSGKSNTNYR 846 (869)
Q Consensus 781 ~kl~DFGla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~ 846 (869)
+||+|||+++....... .......+|+.|+|||.+.. ..++.++||||||+++|||++|+.||...
T Consensus 160 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 228 (320)
T 2i6l_A 160 LKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGA 228 (320)
T ss_dssp EEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred EEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCC
Confidence 99999999987643221 11223457889999998865 67899999999999999999999999653
No 222
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.98 E-value=4e-32 Score=306.04 Aligned_cols=199 Identities=25% Similarity=0.350 Sum_probs=168.7
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCchhhHHHHHHHHHHHhcC--------CCceeeEEeEEe---
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQ--------HPNLVKLYGCCV--- 704 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~--------H~nIv~l~~~~~--- 704 (869)
.++|++.++||+|+||.||+|... +++.||||++... ....+.+.+|+++++.++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 467899999999999999999865 6889999999743 334567889999999885 788999999988
Q ss_pred -eCceEEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhc-CCCCeEEcCCCCCCEEEcCCC---
Q 002899 705 -EGNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHED-SRIKIVHRDIKTSNVLLDKDL--- 779 (869)
Q Consensus 705 -~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~iiH~Dlk~~NILl~~~~--- 779 (869)
.....++||||+. +++.+.+..... ..+++..++.++.||+.||+|||++ + |+||||||+|||++.++
T Consensus 115 ~~~~~~~lv~e~~~-~~l~~~~~~~~~---~~~~~~~~~~i~~qi~~aL~~lH~~~g---ivHrDikp~NIll~~~~~~~ 187 (397)
T 1wak_A 115 VNGTHICMVFEVLG-HHLLKWIIKSNY---QGLPLPCVKKIIQQVLQGLDYLHTKCR---IIHTDIKPENILLSVNEQYI 187 (397)
T ss_dssp TTEEEEEEEECCCC-CBHHHHHHHTTT---SCCCHHHHHHHHHHHHHHHHHHHHTTC---EECCCCSGGGEEECCCHHHH
T ss_pred CCCceEEEEEeccC-ccHHHHHHhccc---CCCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHeeEeccchhh
Confidence 4567899999995 556555544321 2589999999999999999999998 7 99999999999999775
Q ss_pred ----------------------------------------------cEEEeecCCceeecCCCccccccccccccccchh
Q 002899 780 ----------------------------------------------NAKISDFGLAKLYEEDKTHISTRIAGTIGYMAPE 813 (869)
Q Consensus 780 ----------------------------------------------~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE 813 (869)
.+||+|||++....... ....||+.|+|||
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~----~~~~gt~~y~aPE 263 (397)
T 1wak_A 188 RRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHF----TEDIQTRQYRSLE 263 (397)
T ss_dssp HHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCS----CSCCSCGGGCCHH
T ss_pred hhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccC----ccCCCCCcccCCh
Confidence 79999999998765332 2346899999999
Q ss_pred hcccCCCCchhHHHHHHHHHHHHHcCCCCCCCCC
Q 002899 814 YAMRGYLTSKADVYSFGVVTLEIVSGKSNTNYRP 847 (869)
Q Consensus 814 ~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~ 847 (869)
++.+..++.++|||||||++|||++|+.||....
T Consensus 264 ~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~ 297 (397)
T 1wak_A 264 VLIGSGYNTPADIWSTACMAFELATGDYLFEPHS 297 (397)
T ss_dssp HHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCC
T ss_pred hhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCc
Confidence 9999899999999999999999999999997644
No 223
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.98 E-value=4.5e-32 Score=293.18 Aligned_cols=198 Identities=28% Similarity=0.413 Sum_probs=167.5
Q ss_pred CCCCCCeeeccCceEEEEEEEcC-C---cEEEEEEecccCc-hhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceE-EEE
Q 002899 639 NFDPANKVGEGGFGSVYKGILSD-G---TVIAVKQLSSKSR-QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQL-LLV 712 (869)
Q Consensus 639 ~f~~~~~IG~G~fG~Vyka~~~~-g---~~VAvK~~~~~~~-~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~-~lV 712 (869)
.|+..++||+|+||.||+|.+.+ + ..||+|.+..... ...+.|.+|++++++++||||+++++++.+.+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 34556899999999999998642 2 3799999875433 3457789999999999999999999999876665 999
Q ss_pred EEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceee
Q 002899 713 YEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 792 (869)
Q Consensus 713 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~ 792 (869)
|||+.+|+|.+++.... ..+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++..
T Consensus 102 ~e~~~~~~L~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 174 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQ----RNPTVKDLISFGLQVARGMEYLAEQK---FVHRDLAARNCMLDESFTVKVADFGLARDI 174 (298)
T ss_dssp ECCCTTCBHHHHHHCTT----CCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECCTTSSCTT
T ss_pred EecccCCCHHHHHhccc----cCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEeCcCCCcccc
Confidence 99999999999997643 25799999999999999999999998 999999999999999999999999999765
Q ss_pred cCCCc---cccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCC
Q 002899 793 EEDKT---HISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNT 843 (869)
Q Consensus 793 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~ 843 (869)
..... .......+++.|+|||.+.+..++.++||||||+++|||++|+.|+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~ 228 (298)
T 3pls_A 175 LDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPP 228 (298)
T ss_dssp TTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCT
T ss_pred cCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCC
Confidence 43221 1122356788999999999999999999999999999999966664
No 224
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.98 E-value=7.1e-32 Score=292.79 Aligned_cols=202 Identities=25% Similarity=0.329 Sum_probs=168.5
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccC----chhhHHHHHHHHHHHhcCCCceeeEEeEEe--eCceE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS----RQGNREFVNEIGMISAQQHPNLVKLYGCCV--EGNQL 709 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~----~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~--~~~~~ 709 (869)
.++|.+.+.||+|+||.||+|... +++.||+|+++... ......+.+|++++++++||||+++++++. +.+..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 468999999999999999999975 68899999987542 234567899999999999999999999984 45678
Q ss_pred EEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCc
Q 002899 710 LLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLA 789 (869)
Q Consensus 710 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla 789 (869)
++||||++++ |.+++.... ...+++..+..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||++
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~NIl~~~~~~~kl~dfg~~ 156 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVP---EKRFPVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVA 156 (305)
T ss_dssp EEEEECCSEE-HHHHHHHST---TCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEEehhccCC-HHHHHHhCc---ccccCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEcCCCcEEeeccccc
Confidence 9999999977 666665432 236899999999999999999999998 999999999999999999999999999
Q ss_pred eeecCCC-ccccccccccccccchhhcccCC--CCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 790 KLYEEDK-THISTRIAGTIGYMAPEYAMRGY--LTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 790 ~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~--~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
....... ........||+.|+|||++.+.. .+.++||||||+++|||++|+.||..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 215 (305)
T 2wtk_C 157 EALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEG 215 (305)
T ss_dssp EECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCC
Confidence 8765322 12223456899999999987643 47899999999999999999999964
No 225
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.98 E-value=1.6e-32 Score=294.00 Aligned_cols=197 Identities=30% Similarity=0.478 Sum_probs=164.4
Q ss_pred hcCCCCCCeeeccCceEEEEEEEcCCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCceeeEEeEEeeC-ceEEEEEEe
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEG-NQLLLVYEY 715 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~-~~~~lV~E~ 715 (869)
.++|++.+.||+|+||.||+|... ++.||||+++... ..+.+.+|++++++++||||+++++++.+. +..++||||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 96 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence 457888999999999999999875 8899999987543 456789999999999999999999997654 478999999
Q ss_pred ccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeecCC
Q 002899 716 MKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEED 795 (869)
Q Consensus 716 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~ 795 (869)
+++++|.+++.... ...+++..+..++.|+++||+|||+++ ++||||||+||+++.++.+||+|||++......
T Consensus 97 ~~~~~L~~~l~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 170 (278)
T 1byg_A 97 MAKGSLVDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 170 (278)
T ss_dssp CTTEEHHHHHHHHH---HHHCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC-------
T ss_pred CCCCCHHHHHHhcc---cccCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCCcceEEEeCCCcEEEeecccccccccc
Confidence 99999999986542 124789999999999999999999998 999999999999999999999999998765432
Q ss_pred CccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHc-CCCCCCCC
Q 002899 796 KTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNYR 846 (869)
Q Consensus 796 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~~ 846 (869)
. ....+++.|+|||++.+..++.++||||||+++|||++ |+.||...
T Consensus 171 ~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~ 218 (278)
T 1byg_A 171 Q----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI 218 (278)
T ss_dssp ---------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTS
T ss_pred c----cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCC
Confidence 2 12357889999999998899999999999999999998 99998653
No 226
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.98 E-value=9.8e-33 Score=308.63 Aligned_cols=198 Identities=11% Similarity=0.042 Sum_probs=152.7
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCc---hhhHHHHHHHHHHHhc--CCCceeeEE-------eEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR---QGNREFVNEIGMISAQ--QHPNLVKLY-------GCC 703 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~---~~~~~f~~E~~~l~~l--~H~nIv~l~-------~~~ 703 (869)
..+|.+.+.||+|+||.||+|... +++.||||++..... ...+.+.+|+++++.+ +||||++++ +++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 345788999999999999999975 789999999977542 2345677785544444 699988855 444
Q ss_pred eeC-----------------ceEEEEEEeccCCchhhhhhcCCcccccCCCHHHH------HHHHHHHHHHHHHHHhcCC
Q 002899 704 VEG-----------------NQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTR------KKICIGIARGLAYLHEDSR 760 (869)
Q Consensus 704 ~~~-----------------~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~------~~i~~~ia~gL~yLH~~~~ 760 (869)
... ...++||||++ |+|.+++..... .+.+..+ ..++.||++||+|||+++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~----~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~- 214 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF----VYVFRGDEGILALHILTAQLIRLAANLQSKG- 214 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH----SCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT-
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc----ccchhhhhhhhhHHHHHHHHHHHHHHHHHCC-
Confidence 432 34899999999 899999975421 3455666 788899999999999998
Q ss_pred CCeEEcCCCCCCEEEcCCCcEEEeecCCceeecCCCccccccccccccccchhhccc--CCCCchhHHHHHHHHHHHHHc
Q 002899 761 IKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEEDKTHISTRIAGTIGYMAPEYAMR--GYLTSKADVYSFGVVTLEIVS 838 (869)
Q Consensus 761 ~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~k~DvwSlGvil~ellt 838 (869)
|+||||||+|||++.++.+||+|||+++...... ....+|+.|+|||++.+ ..++.++|||||||++|||++
T Consensus 215 --ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~ellt 288 (371)
T 3q60_A 215 --LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRG----PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWC 288 (371)
T ss_dssp --EEETTCSGGGEEECTTSCEEECCGGGEEETTCEE----EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHH
T ss_pred --CccCcCCHHHEEECCCCCEEEEecceeeecCCCc----cCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHh
Confidence 9999999999999999999999999998664321 13456799999999987 679999999999999999999
Q ss_pred CCCCCCCC
Q 002899 839 GKSNTNYR 846 (869)
Q Consensus 839 G~~p~~~~ 846 (869)
|+.||...
T Consensus 289 g~~Pf~~~ 296 (371)
T 3q60_A 289 LFLPFGLV 296 (371)
T ss_dssp SSCSTTBC
T ss_pred CCCCCCCc
Confidence 99999654
No 227
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.98 E-value=5.1e-32 Score=296.95 Aligned_cols=204 Identities=29% Similarity=0.487 Sum_probs=168.8
Q ss_pred HHHhcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCchhhHHHHHHHHHHHhc-CCCceeeEEeEEee------
Q 002899 634 KAATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQ-QHPNLVKLYGCCVE------ 705 (869)
Q Consensus 634 ~~~t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l-~H~nIv~l~~~~~~------ 705 (869)
....++|++.+.||+|+||.||+|... +++.||||++.... ....++.+|++++.++ +||||+++++++..
T Consensus 20 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~ 98 (326)
T 2x7f_A 20 RDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM 98 (326)
T ss_dssp CCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CC
T ss_pred cCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccc
Confidence 345678899999999999999999974 68999999986543 3457889999999998 89999999999987
Q ss_pred CceEEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEee
Q 002899 706 GNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISD 785 (869)
Q Consensus 706 ~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~D 785 (869)
.+..++||||+++|+|.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|
T Consensus 99 ~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~kl~D 172 (326)
T 2x7f_A 99 DDQLWLVMEFCGAGSVTDLIKNTK---GNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVD 172 (326)
T ss_dssp CCEEEEEEECCTTEEHHHHHHHSG---GGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECC
T ss_pred cceEEEEEEcCCCCcHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCcHHHEEEcCCCCEEEee
Confidence 467899999999999999997643 236899999999999999999999998 99999999999999999999999
Q ss_pred cCCceeecCCCccccccccccccccchhhcc-----cCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 786 FGLAKLYEEDKTHISTRIAGTIGYMAPEYAM-----RGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 786 FGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
||++........ ......||+.|+|||++. ...++.++||||||+++|||++|+.||..
T Consensus 173 fg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 236 (326)
T 2x7f_A 173 FGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCD 236 (326)
T ss_dssp CTTTC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTT
T ss_pred CcCceecCcCcc-ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCC
Confidence 999987643221 122356899999999986 56789999999999999999999999954
No 228
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.98 E-value=1.4e-31 Score=307.90 Aligned_cols=204 Identities=25% Similarity=0.343 Sum_probs=173.7
Q ss_pred hcCCCCCCeeeccCceEEEEEEE-cCCcEEEEEEecccCchhhHHHHHHHHHHHhcCC-CceeeEEeEEeeCceEEEEEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQH-PNLVKLYGCCVEGNQLLLVYE 714 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~-~~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H-~nIv~l~~~~~~~~~~~lV~E 714 (869)
.++|++.++||+|+||.||+|+. .+++.||||++..... ..++..|++++..++| +++..+..++.+.+..++|||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 46789999999999999999996 4689999998765432 3468899999999987 556677777788889999999
Q ss_pred eccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEE---cCCCcEEEeecCCcee
Q 002899 715 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLL---DKDLNAKISDFGLAKL 791 (869)
Q Consensus 715 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl---~~~~~~kl~DFGla~~ 791 (869)
|+ +++|.+++.... ..+++..++.|+.||+.||+|||+++ |+||||||+|||+ +.++.+||+|||+++.
T Consensus 84 ~~-g~sL~~ll~~~~----~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 155 (483)
T 3sv0_A 84 LL-GPSLEDLFNFCS----RKLSLKTVLMLADQMINRVEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKK 155 (483)
T ss_dssp CC-CCBHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred CC-CCCHHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCcceEEEecCCCCCeEEEEeCCccee
Confidence 99 899999986432 26899999999999999999999998 9999999999999 6889999999999988
Q ss_pred ecCCCcc------ccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcc
Q 002899 792 YEEDKTH------ISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNYRPNED 850 (869)
Q Consensus 792 ~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~~~~ 850 (869)
+...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~ 220 (483)
T 3sv0_A 156 YRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGT 220 (483)
T ss_dssp CBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSS
T ss_pred ccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchh
Confidence 7654321 1224679999999999999999999999999999999999999997644333
No 229
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.98 E-value=2.3e-32 Score=294.32 Aligned_cols=202 Identities=25% Similarity=0.386 Sum_probs=157.0
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCc-hhh-HHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR-QGN-REFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 713 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~-~~~-~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 713 (869)
.++|++.+.||+|+||.||+|... +++.||||+++.... ... +.+.++...++.++||||+++++++.+++..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 467889999999999999999974 789999999876532 222 33445555678899999999999999999999999
Q ss_pred EeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhc-CCCCeEEcCCCCCCEEEcCCCcEEEeecCCceee
Q 002899 714 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHED-SRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 792 (869)
Q Consensus 714 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~ 792 (869)
||++ |+|.+++.... .....+++..+..++.|++.||+|||++ + |+||||||+||+++.++.+||+|||++...
T Consensus 86 e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T 3fme_A 86 ELMD-TSLDKFYKQVI-DKGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYL 160 (290)
T ss_dssp ECCS-EEHHHHHHHHH-HTTCCCCHHHHHHHHHHHHHHHHHHHHHSC---CCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred ehhc-cchHHHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 9998 48877664321 1123689999999999999999999998 7 999999999999999999999999999876
Q ss_pred cCCCccccccccccccccchhhc----ccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 793 EEDKTHISTRIAGTIGYMAPEYA----MRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 793 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
..... .....||+.|+|||++ ....++.++||||||+++|||++|+.||..
T Consensus 161 ~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 215 (290)
T 3fme_A 161 VDDVA--KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS 215 (290)
T ss_dssp -----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCC
T ss_pred ccccc--ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccc
Confidence 54322 2234689999999996 456789999999999999999999999964
No 230
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.98 E-value=8.3e-32 Score=297.27 Aligned_cols=204 Identities=28% Similarity=0.415 Sum_probs=173.0
Q ss_pred cHHHHHHHhcCCCCCCeeeccCceEEEEEEEcCCcEEEEEEecccCchhhHHHHHHHHHHHh--cCCCceeeEEeEEeeC
Q 002899 629 TLRQIKAATNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISA--QQHPNLVKLYGCCVEG 706 (869)
Q Consensus 629 ~~~~i~~~t~~f~~~~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~--l~H~nIv~l~~~~~~~ 706 (869)
....-....++|.+.+.||+|+||.||+|+. +++.||||++... ..+.+..|++++.. ++||||+++++++...
T Consensus 33 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~ 108 (342)
T 1b6c_B 33 PLLVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKD 108 (342)
T ss_dssp CHHHHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECC
T ss_pred ceeecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeeccc
Confidence 3334455678899999999999999999998 5899999998643 34677889888887 7999999999999887
Q ss_pred c----eEEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEEcCCCCCCEE
Q 002899 707 N----QLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLH--------EDSRIKIVHRDIKTSNVL 774 (869)
Q Consensus 707 ~----~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~iiH~Dlk~~NIL 774 (869)
+ ..++||||+++|+|.+++... .+++..+..++.|++.||+||| +.+ |+||||||+|||
T Consensus 109 ~~~~~~~~lv~e~~~~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~NIl 179 (342)
T 1b6c_B 109 NGTWTQLWLVSDYHEHGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNIL 179 (342)
T ss_dssp CSSCCCEEEEECCCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE---EECSCCSGGGEE
T ss_pred CCccceeEEEEeecCCCcHHHHHhcc------CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC---eeeCCCCHHHEE
Confidence 6 789999999999999999653 5899999999999999999999 665 999999999999
Q ss_pred EcCCCcEEEeecCCceeecCCCcc---ccccccccccccchhhcccCC------CCchhHHHHHHHHHHHHHcC------
Q 002899 775 LDKDLNAKISDFGLAKLYEEDKTH---ISTRIAGTIGYMAPEYAMRGY------LTSKADVYSFGVVTLEIVSG------ 839 (869)
Q Consensus 775 l~~~~~~kl~DFGla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~------~~~k~DvwSlGvil~elltG------ 839 (869)
++.++.+||+|||++......... ......||+.|+|||++.... ++.++||||||+++|||++|
T Consensus 180 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~ 259 (342)
T 1b6c_B 180 VKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGI 259 (342)
T ss_dssp ECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTB
T ss_pred ECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCc
Confidence 999999999999999877654322 123457899999999987652 33789999999999999999
Q ss_pred ----CCCCCC
Q 002899 840 ----KSNTNY 845 (869)
Q Consensus 840 ----~~p~~~ 845 (869)
+.||..
T Consensus 260 ~~~~~~p~~~ 269 (342)
T 1b6c_B 260 HEDYQLPYYD 269 (342)
T ss_dssp CCCCCCTTTT
T ss_pred ccccccCccc
Confidence 677754
No 231
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.98 E-value=7.7e-32 Score=296.62 Aligned_cols=199 Identities=22% Similarity=0.353 Sum_probs=172.0
Q ss_pred hcCCCCCCeeeccCceEEEEEEE-c-CCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCc------eeeEEeEEeeCce
Q 002899 637 TNNFDPANKVGEGGFGSVYKGIL-S-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPN------LVKLYGCCVEGNQ 708 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~-~-~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~n------Iv~l~~~~~~~~~ 708 (869)
.++|++.+.||+|+||.||+|.. . +++.||||+++.. ......+.+|+++++.++|++ ++++++++...+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 46788999999999999999986 3 6889999998753 334567888999998887654 9999999999999
Q ss_pred EEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcC-----------
Q 002899 709 LLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDK----------- 777 (869)
Q Consensus 709 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~----------- 777 (869)
.++||||+ +++|.+++..... .++++..+..++.|+++||+|||+++ |+||||||+|||++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~~~~ 164 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENGF---LPFRLDHIRKMAYQICKSVNFLHSNK---LTHTDLKPENILFVQSDYTEAYNPKI 164 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTTT---CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCCCEEEEEC---
T ss_pred EEEEEcCC-CCCHHHHHHhcCC---CCCcHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeccccccccCCcc
Confidence 99999999 7899998866532 26889999999999999999999998 999999999999987
Q ss_pred --------CCcEEEeecCCceeecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCCCC
Q 002899 778 --------DLNAKISDFGLAKLYEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNYRP 847 (869)
Q Consensus 778 --------~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~~ 847 (869)
++.+||+|||++....... ....||+.|+|||++.+..++.++||||||+++|||++|+.||....
T Consensus 165 ~~~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 238 (339)
T 1z57_A 165 KRDERTLINPDIKVVDFGSATYDDEHH----STLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHD 238 (339)
T ss_dssp -CEEEEESCCCEEECCCSSCEETTSCC----CSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSC
T ss_pred ccccccccCCCceEeeCcccccCcccc----ccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC
Confidence 6689999999998654322 23578999999999998899999999999999999999999997543
No 232
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.98 E-value=7e-33 Score=301.21 Aligned_cols=281 Identities=20% Similarity=0.258 Sum_probs=217.0
Q ss_pred EEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCC--CchhhcCcccccccccc
Q 002899 57 VTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGP--FPKVLTNITTLKNLSIE 133 (869)
Q Consensus 57 ~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~--~~~~~~~l~~L~~L~Ls 133 (869)
+.+++++++++ .+|..+. ++|++|+|++|+|+.+++..|..+ +|++|+|++|+++.. .+..+..+++|++|+|+
T Consensus 10 ~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred CEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 36788888888 5666554 689999999999998877777777 899999999988843 36677788999999999
Q ss_pred ccccCCCCCccccCCCCccEEEeecccccccCC-ccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcCCC-
Q 002899 134 GNLFTGSIPPDIRKLINLQKLILSSNSFTGELP-AELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEG- 211 (869)
Q Consensus 134 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~- 211 (869)
+|.++ .+|..+..+++|++|+|++|++++..+ ..+..+++|++|+|++|++++..+..|..+++|++|+|++|.+++
T Consensus 87 ~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 165 (306)
T 2z66_A 87 FNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN 165 (306)
T ss_dssp SCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGG
T ss_pred CCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccc
Confidence 99888 566778888899999999998886554 578888889999999998888888888888888888888888876
Q ss_pred CchHhhhcCCCCCEEEcCCCCCCCCcccccccccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCCCchhhhcC
Q 002899 212 PIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKL 291 (869)
Q Consensus 212 ~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 291 (869)
..|..+..+++|+.|+|+ +|+|++..|..|..+++|+.|+|++|++++..+..+..+
T Consensus 166 ~~~~~~~~l~~L~~L~Ls-----------------------~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 222 (306)
T 2z66_A 166 FLPDIFTELRNLTFLDLS-----------------------QCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCL 222 (306)
T ss_dssp EECSCCTTCTTCCEEECT-----------------------TSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTC
T ss_pred cchhHHhhCcCCCEEECC-----------------------CCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCc
Confidence 467777777777666665 555555566667777777777777777776666677777
Q ss_pred CCCCEEEeeCCcCCCCCchhhh---ccCCceeeeccCccCCCCCCCCCCCCCccceeccCCCCCCCCCCcCccCCCCCCC
Q 002899 292 AKTNFMYLTGNKLTGPVPKYIF---NSNKNVDISLNNFTWESSDPIECPRGSVNLVESYSSPRNKLDKVHPCLRQNFPCS 368 (869)
Q Consensus 292 ~~L~~L~Ls~N~l~~~~p~~~~---~~l~~l~ls~N~~~~~~~~p~~C~c~~~~~~~~l~~~~~~~~~~~~~~~~~~~C~ 368 (869)
++|+.|+|++|++++..|..+. ..++.|+|++| ||.|+|.+.++..|++..+.... ......|+
T Consensus 223 ~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N--------~~~~~c~~~~~~~~l~~~~~~~~-----~~~~~~C~ 289 (306)
T 2z66_A 223 NSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQN--------DFACTCEHQSFLQWIKDQRQLLV-----EVERMECA 289 (306)
T ss_dssp TTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTC--------CEECSGGGHHHHHHHHHTGGGBS-----CGGGCBEE
T ss_pred ccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCC--------CeecccChHHHHHHHHhhhhhhc-----cccccccC
Confidence 7777777777777777666552 36677777777 88899999999999976543221 12456788
Q ss_pred CCcccccce
Q 002899 369 APADQYHYT 377 (869)
Q Consensus 369 ~p~~~~~~~ 377 (869)
.|+..+|+.
T Consensus 290 ~p~~~~g~~ 298 (306)
T 2z66_A 290 TPSDKQGMP 298 (306)
T ss_dssp ESGGGTTCB
T ss_pred CchhhCCce
Confidence 888776654
No 233
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.98 E-value=5e-32 Score=300.49 Aligned_cols=200 Identities=24% Similarity=0.399 Sum_probs=170.1
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccC-chhhHHHHHHHHHHHhcCCCceeeEEeEEeeC-----ceE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEG-----NQL 709 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~-----~~~ 709 (869)
.++|.+.+.||+|+||.||+|... +|+.||||++.... .....++.+|++++++++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 467889999999999999999976 68999999986543 33356788999999999999999999988764 678
Q ss_pred EEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCc
Q 002899 710 LLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLA 789 (869)
Q Consensus 710 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla 789 (869)
++||||++ |+|.+++... .+++..+..++.|+++||+|||+++ |+||||||+|||++.++.+||+|||++
T Consensus 90 ~lv~e~~~-~~L~~~~~~~------~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a 159 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ------MLSDDHIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLA 159 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEeccC-ccHHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEcCCCcEEEEecccc
Confidence 99999998 5898888653 5899999999999999999999998 999999999999999999999999999
Q ss_pred eeecCCCcc---------ccccccccccccchhhccc-CCCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 002899 790 KLYEEDKTH---------ISTRIAGTIGYMAPEYAMR-GYLTSKADVYSFGVVTLEIVSGKSNTNYR 846 (869)
Q Consensus 790 ~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~ 846 (869)
......... ......||+.|+|||++.. ..++.++||||||+++|||++|+.||...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 226 (353)
T 2b9h_A 160 RIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGR 226 (353)
T ss_dssp EECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 876532211 1123468999999998764 67899999999999999999999999653
No 234
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.98 E-value=2e-32 Score=300.56 Aligned_cols=206 Identities=31% Similarity=0.410 Sum_probs=170.9
Q ss_pred hcCCCCCCeeeccCceEEEEEEE------cCCcEEEEEEeccc-CchhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGIL------SDGTVIAVKQLSSK-SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQL 709 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~------~~g~~VAvK~~~~~-~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 709 (869)
.++|++.+.||+|+||.||+|+. .+++.||||++... ......++.+|+.++++++||||+++++++.+.+..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 46788999999999999999984 24678999999754 334456789999999999999999999999999999
Q ss_pred EEEEEeccCCchhhhhhcCCcc--cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcC---CCcEEEe
Q 002899 710 LLVYEYMKNNCLSRAIFGKDTE--YRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDK---DLNAKIS 784 (869)
Q Consensus 710 ~lV~E~~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~---~~~~kl~ 784 (869)
++||||+++|+|.+++...... ....+++..+..++.|++.||+|||+.+ |+||||||+|||++. +..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eecCcCCHhHEEEecCCCcceEEEC
Confidence 9999999999999999765321 1235899999999999999999999998 999999999999984 4569999
Q ss_pred ecCCceeecCCCc-cccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHc-CCCCCCC
Q 002899 785 DFGLAKLYEEDKT-HISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNY 845 (869)
Q Consensus 785 DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~ 845 (869)
|||++........ .......||+.|+|||++....++.++||||||+++|||++ |+.||..
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~ 248 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 248 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCC
Confidence 9999876543221 12223467889999999998899999999999999999998 9999864
No 235
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.98 E-value=2.7e-32 Score=301.20 Aligned_cols=202 Identities=25% Similarity=0.409 Sum_probs=168.5
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccC-chhhHHHHHHHHH-HHhcCCCceeeEEeEEeeCceEEEEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS-RQGNREFVNEIGM-ISAQQHPNLVKLYGCCVEGNQLLLVY 713 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~-~~~~~~f~~E~~~-l~~l~H~nIv~l~~~~~~~~~~~lV~ 713 (869)
.++|++.+.||+|+||.||+|... +|+.||||++.... .....++..|..+ ++.++||||+++++++.+++..++||
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 129 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 129 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEE
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEH
Confidence 467888899999999999999974 78999999987653 3334556666655 77889999999999999999999999
Q ss_pred EeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhc-CCCCeEEcCCCCCCEEEcCCCcEEEeecCCceee
Q 002899 714 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHED-SRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 792 (869)
Q Consensus 714 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~ 792 (869)
||+++ +|.+++.... .....+++..+..++.||++||+|||++ + |+||||||+|||++.++.+||+|||++...
T Consensus 130 e~~~~-~L~~~l~~~~-~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 204 (340)
T 3an0_A 130 ELMDT-SLDKFYKQVI-DKGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYL 204 (340)
T ss_dssp CCCSE-EHHHHHHHHH-HTSCCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCSCCSTTEEECSTTCEEECCCSHHHHH
T ss_pred HHhhC-cHHHHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeeCCCceec
Confidence 99985 8888775321 1123689999999999999999999987 7 999999999999999999999999999766
Q ss_pred cCCCccccccccccccccchhhcc----cCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 793 EEDKTHISTRIAGTIGYMAPEYAM----RGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 793 ~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
.... ......||+.|+|||++. ...++.++|||||||++|||++|+.||..
T Consensus 205 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~ 259 (340)
T 3an0_A 205 VDSV--AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS 259 (340)
T ss_dssp SCHH--HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCC
T ss_pred cccc--ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCcc
Confidence 4321 122346899999999964 34789999999999999999999999964
No 236
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.98 E-value=1.7e-32 Score=302.03 Aligned_cols=195 Identities=32% Similarity=0.524 Sum_probs=160.0
Q ss_pred hcCCCCCCeeeccCceEEEEEEEcCCcEEEEEEecccCchhhHHHHHHHHH--HHhcCCCceeeEEeEEee-----CceE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGM--ISAQQHPNLVKLYGCCVE-----GNQL 709 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~~~~~~~f~~E~~~--l~~l~H~nIv~l~~~~~~-----~~~~ 709 (869)
.++|++.+.||+|+||.||+|+. +++.||||++.... ...+..|.++ +..++||||+++++.+.. ....
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 87 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY 87 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence 36788899999999999999987 68999999986432 3445555555 445899999999986543 3367
Q ss_pred EEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhc---------CCCCeEEcCCCCCCEEEcCCCc
Q 002899 710 LLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHED---------SRIKIVHRDIKTSNVLLDKDLN 780 (869)
Q Consensus 710 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~---------~~~~iiH~Dlk~~NILl~~~~~ 780 (869)
++||||+++|+|.+++... ..++..+..++.||++||+|||+. + |+||||||+|||++.++.
T Consensus 88 ~lv~e~~~~g~L~~~l~~~------~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~---ivH~Dikp~Nill~~~~~ 158 (336)
T 3g2f_A 88 LLVMEYYPNGSLXKYLSLH------TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA---ISHRDLNSRNVLVKNDGT 158 (336)
T ss_dssp EEEECCCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCC---EECSSCSGGGEEECTTSC
T ss_pred EEEEecCCCCcHHHHHhhc------ccchhHHHHHHHHHHHHHHHHHhhhccccccccc---eeecccccceEEEcCCCc
Confidence 8999999999999999654 358999999999999999999988 6 999999999999999999
Q ss_pred EEEeecCCceeecCCCc-------cccccccccccccchhhccc-------CCCCchhHHHHHHHHHHHHHcCCCCCC
Q 002899 781 AKISDFGLAKLYEEDKT-------HISTRIAGTIGYMAPEYAMR-------GYLTSKADVYSFGVVTLEIVSGKSNTN 844 (869)
Q Consensus 781 ~kl~DFGla~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~-------~~~~~k~DvwSlGvil~elltG~~p~~ 844 (869)
+||+|||++..+..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.|+.
T Consensus 159 ~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~ 236 (336)
T 3g2f_A 159 CVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLF 236 (336)
T ss_dssp EEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGS
T ss_pred EEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCC
Confidence 99999999987653221 11223569999999999876 356678999999999999999977763
No 237
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.97 E-value=1.3e-32 Score=329.29 Aligned_cols=261 Identities=20% Similarity=0.260 Sum_probs=234.2
Q ss_pred CccccCCccccCCCCCCEEEeecCcCCCC-----------------Cchhhc--cc-cceEEEeecccCCCCCchhhcCc
Q 002899 65 NLTGTLPTELSKLRYLKQLDLSRNCLTGS-----------------FSPQWA--SL-QLVELSVMGNRLSGPFPKVLTNI 124 (869)
Q Consensus 65 ~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~-----------------~~~~~~--~l-~L~~L~Ls~N~l~~~~~~~~~~l 124 (869)
++++ +|.+|+++++|++|+|++|.+++. +|..+. .+ +|++|+|++|++.+.+|..|+++
T Consensus 194 ~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l 272 (636)
T 4eco_A 194 NITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKAL 272 (636)
T ss_dssp EEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTC
T ss_pred CCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcC
Confidence 4556 899999999999999999999995 777776 66 89999999999999999999999
Q ss_pred cccccccccccc-cCC-CCCccccCC------CCccEEEeecccccccCCc--cccCCCCCCeEeccCCcCCCCCccccC
Q 002899 125 TTLKNLSIEGNL-FTG-SIPPDIRKL------INLQKLILSSNSFTGELPA--ELTKLTNLNDLRISDNNFSGKIPEFIG 194 (869)
Q Consensus 125 ~~L~~L~Ls~N~-l~~-~~~~~~~~l------~~L~~L~Ls~N~i~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 194 (869)
++|++|+|++|+ +++ .+|..++.+ ++|++|+|++|+++ .+|. .+.++++|++|+|++|+++|.+| .|.
T Consensus 273 ~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~ 350 (636)
T 4eco_A 273 PEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFG 350 (636)
T ss_dssp SSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCE
T ss_pred CCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhC
Confidence 999999999998 998 789888876 99999999999999 8888 89999999999999999998889 999
Q ss_pred CCCcccEEEccCCcCCCCchHhhhcCCC-CCEEEcCCCCCCCCccccccc--ccceEEEcccccCccCCCcccC------
Q 002899 195 KWKKIQKLHIQGSSLEGPIPASISALTS-LTDLRISDLKGSESAFPKLDK--MNLKTLILTKCLIHGEIPDYIG------ 265 (869)
Q Consensus 195 ~l~~L~~L~L~~N~l~~~~~~~l~~l~~-L~~L~L~~n~~~~~~~~~~~~--~~L~~L~Ls~N~i~~~~p~~~~------ 265 (869)
.+++|+.|+|++|+++ .+|..+..+++ |+.|+|++|.++..+...... .+|+.|+|++|++++.+|..|.
T Consensus 351 ~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~ 429 (636)
T 4eco_A 351 SEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLKYIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTP 429 (636)
T ss_dssp EEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCSSCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSC
T ss_pred CCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCcccchhhhhcccCccCEEECcCCcCCCcchhhhccccccc
Confidence 9999999999999999 78888999999 999999999999655332222 2799999999999999999988
Q ss_pred -CCCCcCEEeccCCCCCCCCchhhhcCCCCCEEEeeCCcCCCCCchhhhc----------cCCceeeeccCccCCC
Q 002899 266 -DMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFN----------SNKNVDISLNNFTWES 330 (869)
Q Consensus 266 -~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~----------~l~~l~ls~N~~~~~~ 330 (869)
.+++|+.|+|++|+|+...+..+..+++|+.|+|++|+++ .+|...+. .++.|+|++|+++..+
T Consensus 430 ~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~lp 504 (636)
T 4eco_A 430 FKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLTKLS 504 (636)
T ss_dssp CCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCCBCC
T ss_pred ccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCCccC
Confidence 8899999999999999665566777999999999999999 78877654 8899999999998554
No 238
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.97 E-value=2.2e-32 Score=309.57 Aligned_cols=203 Identities=26% Similarity=0.422 Sum_probs=154.8
Q ss_pred cCCCC-CCeeeccCceEEEEEEEc---CCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCceeeEEeEEee--CceEEE
Q 002899 638 NNFDP-ANKVGEGGFGSVYKGILS---DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVE--GNQLLL 711 (869)
Q Consensus 638 ~~f~~-~~~IG~G~fG~Vyka~~~---~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~--~~~~~l 711 (869)
+.|.+ .++||+|+||.||+|+.. +++.||||++.... ....+.+|++++++++|||||++++++.. ....++
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~l 97 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWL 97 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEE
Confidence 34555 458999999999999975 47889999997543 23578899999999999999999999954 678999
Q ss_pred EEEeccCCchhhhhhcCC----cccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEE----cCCCcEEE
Q 002899 712 VYEYMKNNCLSRAIFGKD----TEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLL----DKDLNAKI 783 (869)
Q Consensus 712 V~E~~~~gsL~~~l~~~~----~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl----~~~~~~kl 783 (869)
||||+++ +|.+++.... ......+++..++.++.||+.||+|||+.+ |+||||||+|||+ +.++.+||
T Consensus 98 v~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl 173 (405)
T 3rgf_A 98 LFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKI 173 (405)
T ss_dssp EEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECCSSTTTTCEEE
T ss_pred EEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeCCCcCHHHeEEecCCCCCCcEEE
Confidence 9999985 7777664321 111225899999999999999999999998 9999999999999 67899999
Q ss_pred eecCCceeecCCCc--cccccccccccccchhhccc-CCCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 002899 784 SDFGLAKLYEEDKT--HISTRIAGTIGYMAPEYAMR-GYLTSKADVYSFGVVTLEIVSGKSNTNYR 846 (869)
Q Consensus 784 ~DFGla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~ 846 (869)
+|||+++....... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 174 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 239 (405)
T 3rgf_A 174 ADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 239 (405)
T ss_dssp CCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred EECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence 99999987654321 12234678999999999887 45899999999999999999999999653
No 239
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.97 E-value=2.4e-32 Score=300.51 Aligned_cols=205 Identities=24% Similarity=0.321 Sum_probs=158.6
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCchhhHHHHHHHHHHHhcC-CCceeeEEeEEe--------eC
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQ-HPNLVKLYGCCV--------EG 706 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~-H~nIv~l~~~~~--------~~ 706 (869)
..+|++.++||+|+||.||+|+.. +++.||||++........+.+.+|+.++.++. ||||+++++++. ..
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 457888999999999999999975 68999999987766666778999999999996 999999999994 34
Q ss_pred ceEEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeec
Q 002899 707 NQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDF 786 (869)
Q Consensus 707 ~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DF 786 (869)
...++||||++ |+|.+++.... ....+++..+..++.||+.||+|||+.+ ++|+||||||+|||++.++.+||+||
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~~-~~ivH~Dikp~NIl~~~~~~~kl~Df 182 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKME--SRGPLSCDTVLKIFYQTCRAVQHMHRQK-PPIIHRDLKVENLLLSNQGTIKLCDF 182 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHH--TTCSCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred ceEEEEEEecC-CCHHHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHhCC-CCEEEccCCcccEEECCCCCEEEecC
Confidence 45899999996 78888875421 1226899999999999999999999875 34999999999999999999999999
Q ss_pred CCceeecCCCccc-----------cccccccccccchhhc---ccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 787 GLAKLYEEDKTHI-----------STRIAGTIGYMAPEYA---MRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 787 Gla~~~~~~~~~~-----------~~~~~gt~~y~aPE~~---~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
|++.......... .....||+.|+|||++ ....++.++||||||+++|||++|+.||..
T Consensus 183 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~ 255 (337)
T 3ll6_A 183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFED 255 (337)
T ss_dssp TTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--
T ss_pred ccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcc
Confidence 9998765432211 1134589999999998 566789999999999999999999999853
No 240
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.97 E-value=1.2e-32 Score=298.34 Aligned_cols=208 Identities=26% Similarity=0.435 Sum_probs=157.5
Q ss_pred HHhcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccC-chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEE
Q 002899 635 AATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLV 712 (869)
Q Consensus 635 ~~t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 712 (869)
...++|.+.+.||+|+||.||+|... +++.||||++.... ....+++.+|++++++++||||+++++++...+..++|
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV 91 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence 34578999999999999999999854 68899999886543 33456788999999999999999999999999999999
Q ss_pred EEeccCCchhhhhhcC---CcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCc
Q 002899 713 YEYMKNNCLSRAIFGK---DTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLA 789 (869)
Q Consensus 713 ~E~~~~gsL~~~l~~~---~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla 789 (869)
|||+++++|.+++... .......+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++
T Consensus 92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~ 168 (303)
T 2vwi_A 92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG---QIHRDVKAGNILLGEDGSVQIADFGVS 168 (303)
T ss_dssp EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCCHHH
T ss_pred ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCCChhhEEEcCCCCEEEEeccch
Confidence 9999999999988531 1111236899999999999999999999998 999999999999999999999999998
Q ss_pred eeecCCCc----cccccccccccccchhhccc-CCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 790 KLYEEDKT----HISTRIAGTIGYMAPEYAMR-GYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 790 ~~~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
........ .......||+.|+|||++.. ..++.++||||||+++|||++|+.||..
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 229 (303)
T 2vwi_A 169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHK 229 (303)
T ss_dssp HHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred heeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCcc
Confidence 76543221 11223568999999999875 5689999999999999999999999965
No 241
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.97 E-value=8e-32 Score=299.67 Aligned_cols=209 Identities=24% Similarity=0.334 Sum_probs=160.9
Q ss_pred HHHHHHHhcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCceeeEEeEEeeCce
Q 002899 630 LRQIKAATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQ 708 (869)
Q Consensus 630 ~~~i~~~t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~ 708 (869)
..+.....++|++.+.||+|+||.||+|... +++.||||++.... .....+.+|++.+..++||||+++++++...+.
T Consensus 15 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~ 93 (360)
T 3e3p_A 15 DERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGE 93 (360)
T ss_dssp SHHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECS
T ss_pred hhhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhcccc
Confidence 3455677889999999999999999999975 68999999886532 234466788888999999999999999976443
Q ss_pred -------EEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHH--hcCCCCeEEcCCCCCCEEEcC-C
Q 002899 709 -------LLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLH--EDSRIKIVHRDIKTSNVLLDK-D 778 (869)
Q Consensus 709 -------~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH--~~~~~~iiH~Dlk~~NILl~~-~ 778 (869)
.++||||++++ |.+.+.... .....+++..+..++.|++.||.||| +.+ |+||||||+|||++. +
T Consensus 94 ~~~~~~~~~lv~e~~~~~-l~~~~~~~~-~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~---ivH~Dlkp~NIll~~~~ 168 (360)
T 3e3p_A 94 RDRRDIYLNVVMEYVPDT-LHRCCRNYY-RRQVAPPPILIKVFLFQLIRSIGCLHLPSVN---VCHRDIKPHNVLVNEAD 168 (360)
T ss_dssp SCTTCEEEEEEEECCSCB-HHHHHHHHH-TTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC---CBCSCCCGGGEEEETTT
T ss_pred ccccceeEEEEeeccccc-HHHHHHHHh-hcccCCCHHHHHHHHHHHHHHHHHHhCCCCC---eecCcCCHHHEEEeCCC
Confidence 78999999864 444332210 11236899999999999999999999 776 999999999999997 8
Q ss_pred CcEEEeecCCceeecCCCccccccccccccccchhhcccC-CCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 002899 779 LNAKISDFGLAKLYEEDKTHISTRIAGTIGYMAPEYAMRG-YLTSKADVYSFGVVTLEIVSGKSNTNYR 846 (869)
Q Consensus 779 ~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~DvwSlGvil~elltG~~p~~~~ 846 (869)
+.+||+|||++........ .....||+.|+|||++.+. .++.++|||||||++|||++|+.||...
T Consensus 169 ~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~ 235 (360)
T 3e3p_A 169 GTLKLCDFGSAKKLSPSEP--NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGD 235 (360)
T ss_dssp TEEEECCCTTCBCCCTTSC--CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CcEEEeeCCCceecCCCCC--cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCC
Confidence 9999999999987654332 2345689999999998654 4899999999999999999999999753
No 242
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.97 E-value=9.5e-32 Score=302.70 Aligned_cols=281 Identities=17% Similarity=0.179 Sum_probs=192.8
Q ss_pred ceEEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhhcCccccccccc
Q 002899 54 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSI 132 (869)
Q Consensus 54 ~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 132 (869)
.+++.|+++++.++...+..|..+++|++|+|++|.|++..+..|..+ +|++|+|++|++++..|..|.++++|++|+|
T Consensus 45 ~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 124 (390)
T 3o6n_A 45 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 124 (390)
T ss_dssp CCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEEC
Confidence 467888999988886555567889999999999999988888888877 8999999999999888888899999999999
Q ss_pred cccccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCC----------------
Q 002899 133 EGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKW---------------- 196 (869)
Q Consensus 133 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l---------------- 196 (869)
++|+++...+..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++.....+.++
T Consensus 125 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~~~~~~ 204 (390)
T 3o6n_A 125 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIP 204 (390)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCCSEEECC
T ss_pred CCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccccccccccceeecccccccccCCC
Confidence 9999985555557889999999999999987778888889999999999999886543333222
Q ss_pred ---------------------CcccEEEccCCcCCCCchHhhhcCCCCCEEEcCCCCCCCCcccccc-cccceEEEcccc
Q 002899 197 ---------------------KKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLD-KMNLKTLILTKC 254 (869)
Q Consensus 197 ---------------------~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~-~~~L~~L~Ls~N 254 (869)
++|+.|+|++|.+++. ..+..+++|+.|+|++|.+.......+. ..+|+.|+|++|
T Consensus 205 ~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 282 (390)
T 3o6n_A 205 IAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNN 282 (390)
T ss_dssp SSCSEEECCSSCCCEEECCCCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSS
T ss_pred CcceEEECCCCeeeeccccccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCC
Confidence 1344444444444432 3455556666666666655554333332 225666666666
Q ss_pred cCccCCCcccCCCCCcCEEeccCCCCCCCCchhhhcCCCCCEEEeeCCcCCCCCchhhhccCCceeeeccCccCCCCCCC
Q 002899 255 LIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFNSNKNVDISLNNFTWESSDPI 334 (869)
Q Consensus 255 ~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~l~ls~N~~~~~~~~p~ 334 (869)
++++ +|..+..+++|+.|+|++|+++ .+|..+..+++|+.|+|++|++++. |...+..++.|++++| ||
T Consensus 283 ~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~-~~~~~~~L~~L~l~~N--------~~ 351 (390)
T 3o6n_A 283 RLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-KLSTHHTLKNLTLSHN--------DW 351 (390)
T ss_dssp CCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-CCCTTCCCSEEECCSS--------CE
T ss_pred cCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCcccee-CchhhccCCEEEcCCC--------Cc
Confidence 6654 2334455566666666666665 3444555566666666666666533 3333455566666666 89
Q ss_pred CCCCCCccceecc
Q 002899 335 ECPRGSVNLVESY 347 (869)
Q Consensus 335 ~C~c~~~~~~~~l 347 (869)
.|+|...++..|.
T Consensus 352 ~~~~~~~~~~~~~ 364 (390)
T 3o6n_A 352 DCNSLRALFRNVA 364 (390)
T ss_dssp EHHHHHHHTTTCC
T ss_pred cchhHHHHHHHHH
Confidence 9998665555443
No 243
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.97 E-value=1e-31 Score=314.18 Aligned_cols=183 Identities=21% Similarity=0.298 Sum_probs=141.6
Q ss_pred cCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcCCC--CchHhhhcCCCCCEEEcCCCCCCC-Ccccccc-ccc
Q 002899 170 TKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEG--PIPASISALTSLTDLRISDLKGSE-SAFPKLD-KMN 245 (869)
Q Consensus 170 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~~~~l~~l~~L~~L~L~~n~~~~-~~~~~~~-~~~ 245 (869)
..+++|++|+|++|++++..|..+..+++|+.|+|++|++++ .+|..+..+++|+.|+|++|.+.. .+...+. ..+
T Consensus 321 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~ 400 (520)
T 2z7x_B 321 SKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKS 400 (520)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTT
T ss_pred hhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCcc
Confidence 566778888888888887778888888888888888888886 456778888888888888888876 4443333 347
Q ss_pred ceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCCCchhhhcCCCCCEEEeeCCcCCCCCchh-h--hccCCceeee
Q 002899 246 LKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKY-I--FNSNKNVDIS 322 (869)
Q Consensus 246 L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~--~~~l~~l~ls 322 (869)
|+.|+|++|++++..|..+. ++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|+ .+|.. + +..++.|+++
T Consensus 401 L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~ 476 (520)
T 2z7x_B 401 LLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLH 476 (520)
T ss_dssp CCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECC
T ss_pred CCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEECc
Confidence 88888888888877776654 78899999999998 77777779999999999999998 45654 3 4578889999
Q ss_pred ccCccCCCCCCCCCCCCCccc-eeccCCCCCCCCCCcCccCCCCCCCCCc
Q 002899 323 LNNFTWESSDPIECPRGSVNL-VESYSSPRNKLDKVHPCLRQNFPCSAPA 371 (869)
Q Consensus 323 ~N~~~~~~~~p~~C~c~~~~~-~~~l~~~~~~~~~~~~~~~~~~~C~~p~ 371 (869)
+| ||.|+|.+.|+ ..|+....... ..+..|+.|.
T Consensus 477 ~N--------~~~c~c~~~~~~~~~~~~~~~~~-------~~~~~C~~p~ 511 (520)
T 2z7x_B 477 TN--------PWDCSCPRIDYLSRWLNKNSQKE-------QGSAKCSGSG 511 (520)
T ss_dssp SS--------CBCCCHHHHHHHHHHHHHTTTTE-------ESCCBBTTTC
T ss_pred CC--------CCcccCCchHHHHHHHHhccccC-------CCCCCcCCcc
Confidence 98 99999999999 88987654332 2456777774
No 244
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.97 E-value=3.6e-32 Score=292.95 Aligned_cols=201 Identities=25% Similarity=0.435 Sum_probs=163.0
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc--CCc--EEEEEEeccc---CchhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS--DGT--VIAVKQLSSK---SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQL 709 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~--~g~--~VAvK~~~~~---~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 709 (869)
.++|++.+.||+|+||.||+|++. +++ .||||+++.. .....+.+.+|++++++++||||+++++++.... .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 357888999999999999999864 233 6899988754 2334578899999999999999999999998765 8
Q ss_pred EEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCc
Q 002899 710 LLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLA 789 (869)
Q Consensus 710 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla 789 (869)
++||||+++++|.+++.... ..+++..+..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||++
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~ 168 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQ----GHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLM 168 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHG----GGSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTC
T ss_pred eeeEecccCCCHHHHHHhcc----CCcCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEEcCCCCEEEcccccc
Confidence 89999999999999886532 25899999999999999999999998 999999999999999999999999999
Q ss_pred eeecCCCcc--ccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHc-CCCCCCC
Q 002899 790 KLYEEDKTH--ISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNY 845 (869)
Q Consensus 790 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~ 845 (869)
......... ......+|+.|+|||++....++.++||||||+++|||++ |+.||..
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~ 227 (291)
T 1u46_A 169 RALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIG 227 (291)
T ss_dssp EECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred ccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence 877543322 1223457889999999998889999999999999999999 9999964
No 245
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.97 E-value=1.4e-33 Score=305.64 Aligned_cols=190 Identities=31% Similarity=0.462 Sum_probs=150.6
Q ss_pred hcCCCCCCeeeccCceEEEEEEEcCCcEEEEEEecccCchhhHHHHHHHHHHHh--cCCCceeeEEeEEeeCc----eEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISA--QQHPNLVKLYGCCVEGN----QLL 710 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~--l~H~nIv~l~~~~~~~~----~~~ 710 (869)
.++|.+.+.||+|+||.||+|+.. ++.||||++... ....+..|.+++.. ++||||+++++++...+ ..+
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 77 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred cceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence 467999999999999999999875 889999998643 34567788888887 79999999999998876 789
Q ss_pred EEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEEcCCCCCCEEEcCCCcEE
Q 002899 711 LVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLH--------EDSRIKIVHRDIKTSNVLLDKDLNAK 782 (869)
Q Consensus 711 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~iiH~Dlk~~NILl~~~~~~k 782 (869)
+||||+++|+|.+++... .+++..+..++.|++.||+||| +.+ |+||||||+|||++.++.+|
T Consensus 78 lv~e~~~~g~L~~~l~~~------~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nil~~~~~~~k 148 (303)
T 3gxj_A 78 LVSDYHEHGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGTCC 148 (303)
T ss_dssp EEEECCTTCCHHHHHHHC------CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-
T ss_pred EEEeccCCCCHHHHHhcc------CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCC---EeeCcCCHHHeEECCCCCEE
Confidence 999999999999999543 4788899999999999999999 666 99999999999999999999
Q ss_pred EeecCCceeecCCCccc---cccccccccccchhhcccC------CCCchhHHHHHHHHHHHHHcC
Q 002899 783 ISDFGLAKLYEEDKTHI---STRIAGTIGYMAPEYAMRG------YLTSKADVYSFGVVTLEIVSG 839 (869)
Q Consensus 783 l~DFGla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~k~DvwSlGvil~elltG 839 (869)
|+|||++.......... .....||+.|+|||++.+. .++.++|||||||++|||++|
T Consensus 149 l~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g 214 (303)
T 3gxj_A 149 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 214 (303)
T ss_dssp BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGG
T ss_pred EeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhc
Confidence 99999997765443221 1234689999999998766 344689999999999999999
No 246
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.97 E-value=1.6e-31 Score=315.78 Aligned_cols=286 Identities=20% Similarity=0.227 Sum_probs=180.3
Q ss_pred ceEEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhhcCccccccccc
Q 002899 54 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSI 132 (869)
Q Consensus 54 ~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 132 (869)
.+++.|+|++|.+++..|.+|.++++|++|+|++|.|++..|..|..+ +|++|+|++|+++. +|.. .+++|++|+|
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~--~l~~L~~L~L 128 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQN-ISCC--PMASLRHLDL 128 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCCE-ECSC--CCTTCSEEEC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCCc-cCcc--ccccCCEEEC
Confidence 568888888888887777788888888888888888888877777776 67777777777763 3332 5666666666
Q ss_pred cccccCCC-CCccccCCCCccEEEeeccccc-------------------------------------------------
Q 002899 133 EGNLFTGS-IPPDIRKLINLQKLILSSNSFT------------------------------------------------- 162 (869)
Q Consensus 133 s~N~l~~~-~~~~~~~l~~L~~L~Ls~N~i~------------------------------------------------- 162 (869)
++|++++. +|..|.++++|++|+|++|+++
T Consensus 129 s~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~ 208 (562)
T 3a79_B 129 SFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQLDLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSL 208 (562)
T ss_dssp CSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTTTTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSC
T ss_pred CCCCccccCchHhhcccCcccEEecCCCccccCchhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecCccc
Confidence 66666542 2345555555555555555443
Q ss_pred --------------------------------------------------------------------------------
Q 002899 163 -------------------------------------------------------------------------------- 162 (869)
Q Consensus 163 -------------------------------------------------------------------------------- 162 (869)
T Consensus 209 ~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l 288 (562)
T 3a79_B 209 FSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTI 288 (562)
T ss_dssp CCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEE
T ss_pred hhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEe
Confidence
Q ss_pred -ccCCccc-----------------------------------------------------cCCCCCCeEeccCCcCCCC
Q 002899 163 -GELPAEL-----------------------------------------------------TKLTNLNDLRISDNNFSGK 188 (869)
Q Consensus 163 -~~~p~~~-----------------------------------------------------~~l~~L~~L~Ls~N~l~~~ 188 (869)
+.+|..+ ..+++|++|+|++|++++.
T Consensus 289 ~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~~L~l~~n~l~~~ 368 (562)
T 3a79_B 289 TERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDS 368 (562)
T ss_dssp CSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTT
T ss_pred eccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCceEEECCCCccccc
Confidence 2222222 3445555555555555555
Q ss_pred CccccCCCCcccEEEccCCcCCCC--chHhhhcCCCCCEEEcCCCCCCC-Ccccccc-cccceEEEcccccCccCCCccc
Q 002899 189 IPEFIGKWKKIQKLHIQGSSLEGP--IPASISALTSLTDLRISDLKGSE-SAFPKLD-KMNLKTLILTKCLIHGEIPDYI 264 (869)
Q Consensus 189 ~~~~~~~l~~L~~L~L~~N~l~~~--~~~~l~~l~~L~~L~L~~n~~~~-~~~~~~~-~~~L~~L~Ls~N~i~~~~p~~~ 264 (869)
.|..|.++++|+.|+|++|++++. +|..+.++++|+.|+|++|.++. .+...+. ..+|+.|+|++|+|++..|..+
T Consensus 369 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l 448 (562)
T 3a79_B 369 VFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCL 448 (562)
T ss_dssp TTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSC
T ss_pred hhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhh
Confidence 555555556666666666665542 23445556666666666666554 3322222 2356666666666655544443
Q ss_pred CCCCCcCEEeccCCCCCCCCchhhhcCCCCCEEEeeCCcCCCCCchh-h--hccCCceeeeccCccCCCCCCCCCCCCCc
Q 002899 265 GDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKY-I--FNSNKNVDISLNNFTWESSDPIECPRGSV 341 (869)
Q Consensus 265 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~--~~~l~~l~ls~N~~~~~~~~p~~C~c~~~ 341 (869)
. ++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|+ .+|.. + +..++.|++++| ||.|+|++.
T Consensus 449 ~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N--------~~~c~c~~~ 516 (562)
T 3a79_B 449 P--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDN--------PWDCTCPGI 516 (562)
T ss_dssp C--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSC--------CBCCCHHHH
T ss_pred c--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCC--------CcCCCcchH
Confidence 3 56777777777777 55555557777777777777777 45544 3 446677777777 999999999
Q ss_pred ccee-ccCCCCCCC
Q 002899 342 NLVE-SYSSPRNKL 354 (869)
Q Consensus 342 ~~~~-~l~~~~~~~ 354 (869)
|++. |.......+
T Consensus 517 ~~~~~~~~~~~~~~ 530 (562)
T 3a79_B 517 RYLSEWINKHSGVV 530 (562)
T ss_dssp HHHHHHHHHTTTTE
T ss_pred HHHHHHHHhcCCcc
Confidence 9977 766544333
No 247
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.97 E-value=8.1e-32 Score=301.15 Aligned_cols=194 Identities=27% Similarity=0.421 Sum_probs=165.9
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccC--chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceE----
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQL---- 709 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~---- 709 (869)
.++|.+.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+++++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 467889999999999999999975 68999999997643 23356788999999999999999999999877654
Q ss_pred --EEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecC
Q 002899 710 --LLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFG 787 (869)
Q Consensus 710 --~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFG 787 (869)
++||||++ ++|.+.+.. .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kL~Dfg 189 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM-------EFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFG 189 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS-------CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECSTT
T ss_pred eEEEEEcccc-ccHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCcCHHHeEECCCCCEEEEecC
Confidence 99999998 578777622 4899999999999999999999998 9999999999999999999999999
Q ss_pred CceeecCCCccccccccccccccchhhccc-CCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 788 LAKLYEEDKTHISTRIAGTIGYMAPEYAMR-GYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 788 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
+++..... .....||+.|+|||++.+ ..++.++||||||+++|||++|+.||..
T Consensus 190 ~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 244 (371)
T 4exu_A 190 LARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKG 244 (371)
T ss_dssp CC------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccccccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCC
Confidence 99865432 223568999999999877 6889999999999999999999999965
No 248
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.97 E-value=8.6e-32 Score=316.99 Aligned_cols=138 Identities=22% Similarity=0.246 Sum_probs=104.4
Q ss_pred cceEEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhhcCcccccccc
Q 002899 53 TCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLS 131 (869)
Q Consensus 53 ~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 131 (869)
..+++.|+|++|++++..|.+|.++++|++|+|++|+|++.++..|..+ +|++|+|++|++++..+..|+++++|++|+
T Consensus 25 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 104 (549)
T 2z81_A 25 TAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLN 104 (549)
T ss_dssp CTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEE
T ss_pred CCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEE
Confidence 3478899999999998888889999999999999999988888888877 799999999999888888888889999999
Q ss_pred ccccccCCC-CCccccCCCCccEEEeecccccccCC-ccccCCCCCCeEeccCCcCCCCCc
Q 002899 132 IEGNLFTGS-IPPDIRKLINLQKLILSSNSFTGELP-AELTKLTNLNDLRISDNNFSGKIP 190 (869)
Q Consensus 132 Ls~N~l~~~-~~~~~~~l~~L~~L~Ls~N~i~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~~ 190 (869)
|++|.+++. .|..+.++++|++|+|++|++.+.+| ..|.++++|++|+|++|++++..|
T Consensus 105 Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 165 (549)
T 2z81_A 105 LMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQS 165 (549)
T ss_dssp CTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECT
T ss_pred CCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccCh
Confidence 999888853 45567777777777777776333332 345555555555555555544333
No 249
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.97 E-value=1e-31 Score=301.54 Aligned_cols=204 Identities=21% Similarity=0.285 Sum_probs=171.6
Q ss_pred HHHHhcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCchhhHHHHHHHHHHHhcC-CC-----ceeeEEeEEee
Q 002899 633 IKAATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQ-HP-----NLVKLYGCCVE 705 (869)
Q Consensus 633 i~~~t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~-H~-----nIv~l~~~~~~ 705 (869)
.....++|++.+.||+|+||.||+|... +++.||||+++.. .....++..|++++..++ |+ +|+++++++..
T Consensus 49 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~ 127 (382)
T 2vx3_A 49 GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMF 127 (382)
T ss_dssp TCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEE
T ss_pred CCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeecc
Confidence 3445688999999999999999999976 6789999999743 333566778888888775 54 49999999999
Q ss_pred CceEEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEc--CCCcEEE
Q 002899 706 GNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLD--KDLNAKI 783 (869)
Q Consensus 706 ~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~--~~~~~kl 783 (869)
.+..++||||++ |+|.+++..... ..+++..+..++.|++.||+|||.+ ..+|+||||||+|||++ .++.+||
T Consensus 128 ~~~~~lv~e~~~-~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL 202 (382)
T 2vx3_A 128 RNHLCLVFEMLS-YNLYDLLRNTNF---RGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKI 202 (382)
T ss_dssp TTEEEEEEECCC-CBHHHHHHHTTT---SCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEE
T ss_pred CCceEEEEecCC-CCHHHHHhhcCc---CCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEE
Confidence 999999999997 599998876532 2589999999999999999999952 12399999999999994 5788999
Q ss_pred eecCCceeecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 002899 784 SDFGLAKLYEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNYR 846 (869)
Q Consensus 784 ~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~ 846 (869)
+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 203 ~DFG~a~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 203 VDFGSSCQLGQRI----YQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp CCCTTCEETTCCC----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred EeccCceeccccc----ccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 9999998764322 2357899999999999999999999999999999999999999753
No 250
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.97 E-value=1.4e-31 Score=287.97 Aligned_cols=201 Identities=26% Similarity=0.440 Sum_probs=173.5
Q ss_pred HHHhcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccC--chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEE
Q 002899 634 KAATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLL 710 (869)
Q Consensus 634 ~~~t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 710 (869)
....++|++.+.||+|+||.||+|... +++.||+|++.... ......+.+|++++++++||||+++++++.+.+..+
T Consensus 18 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 97 (287)
T 2wei_A 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFY 97 (287)
T ss_dssp HHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred HHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEE
Confidence 344578999999999999999999976 68999999986542 234567899999999999999999999999999999
Q ss_pred EEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCC---CcEEEeecC
Q 002899 711 LVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKD---LNAKISDFG 787 (869)
Q Consensus 711 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~---~~~kl~DFG 787 (869)
+||||+++++|.+.+.... .+++..+..++.|++.||+|||+.+ ++||||||+||+++.+ +.+||+|||
T Consensus 98 lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIlv~~~~~~~~~kL~Dfg 169 (287)
T 2wei_A 98 IVGELYTGGELFDEIIKRK-----RFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFG 169 (287)
T ss_dssp EEECCCCSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECSTT
T ss_pred EEEEccCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChhhEEEecCCCcccEEEeccC
Confidence 9999999999998886542 5899999999999999999999998 9999999999999754 479999999
Q ss_pred CceeecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 788 LAKLYEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 788 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
++........ .....|++.|+|||.+.+ .++.++||||||+++|||++|+.||..
T Consensus 170 ~~~~~~~~~~--~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~ 224 (287)
T 2wei_A 170 LSTCFQQNTK--MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYG 224 (287)
T ss_dssp GGGTBCCCSS--CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cceeecCCCc--cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCC
Confidence 9876643322 123458899999998875 489999999999999999999999964
No 251
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.97 E-value=1.1e-31 Score=294.73 Aligned_cols=203 Identities=27% Similarity=0.445 Sum_probs=151.0
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCc-hhhHHHHHHHH-HHHhcCCCceeeEEeEEeeCceEEEEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR-QGNREFVNEIG-MISAQQHPNLVKLYGCCVEGNQLLLVY 713 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~-~~~~~f~~E~~-~l~~l~H~nIv~l~~~~~~~~~~~lV~ 713 (869)
.++|++.+.||+|+||.||+|... +++.||||++..... ....++..|+. +++.++||||+++++++...+..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 367888999999999999999985 689999999876532 33455666665 677789999999999999999999999
Q ss_pred EeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhc-CCCCeEEcCCCCCCEEEcCCCcEEEeecCCceee
Q 002899 714 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHED-SRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 792 (869)
Q Consensus 714 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~ 792 (869)
||+++ +|.+++..........+++..+..++.|+++||.|||+. + |+||||||+|||++.++.+||+|||+++..
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 176 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK---IIHRDIKPSNILLDRSGNIKLCDFGISGQL 176 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS---CCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC---EeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence 99985 777766431111123689999999999999999999998 7 999999999999999999999999999876
Q ss_pred cCCCccccccccccccccchhhc----ccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 793 EEDKTHISTRIAGTIGYMAPEYA----MRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 793 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
..... .....||+.|+|||++ ....++.++||||||+++|||++|+.||..
T Consensus 177 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 231 (327)
T 3aln_A 177 VDSIA--KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPK 231 (327)
T ss_dssp -------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSC
T ss_pred ccccc--cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 53322 2234689999999998 456789999999999999999999999854
No 252
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.97 E-value=3.5e-32 Score=296.62 Aligned_cols=206 Identities=24% Similarity=0.387 Sum_probs=169.8
Q ss_pred HHHHHHHhcCCCCCCeeeccCceEEEEEEEcCCcEEEEEEecccC--chhhHHHHHHHHHHHhcC--CCceeeEEeEEee
Q 002899 630 LRQIKAATNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQ--HPNLVKLYGCCVE 705 (869)
Q Consensus 630 ~~~i~~~t~~f~~~~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~--~~~~~~f~~E~~~l~~l~--H~nIv~l~~~~~~ 705 (869)
++.+....++|++.+.||+|+||.||+|...+++.||||++.... ......+.+|++++.+++ ||||+++++++..
T Consensus 20 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~ 99 (313)
T 3cek_A 20 FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT 99 (313)
T ss_dssp CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEEC
T ss_pred eeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeec
Confidence 333444567789999999999999999998889999999986542 334577899999999997 5999999999999
Q ss_pred CceEEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEee
Q 002899 706 GNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISD 785 (869)
Q Consensus 706 ~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~D 785 (869)
++..++||| +.+++|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+|||+++ +.+||+|
T Consensus 100 ~~~~~lv~e-~~~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~-~~~kL~D 169 (313)
T 3cek_A 100 DQYIYMVME-CGNIDLNSWLKKKK-----SIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVD-GMLKLID 169 (313)
T ss_dssp SSEEEEEEC-CCSEEHHHHHHHCS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEET-TEEEECC
T ss_pred CCEEEEEEe-cCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEEEC-CeEEEee
Confidence 999999999 67889999987543 6899999999999999999999997 999999999999964 8999999
Q ss_pred cCCceeecCCCcc-ccccccccccccchhhccc-----------CCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 786 FGLAKLYEEDKTH-ISTRIAGTIGYMAPEYAMR-----------GYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 786 FGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
||++......... ......||+.|+|||++.. ..++.++||||||+++|||++|+.||..
T Consensus 170 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 241 (313)
T 3cek_A 170 FGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 241 (313)
T ss_dssp CSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred ccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhh
Confidence 9999876543221 1223568999999999865 4688899999999999999999999964
No 253
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.97 E-value=9.6e-32 Score=321.36 Aligned_cols=203 Identities=28% Similarity=0.406 Sum_probs=170.4
Q ss_pred HHhcCCCCCCeeeccCceEEEEEEEcC----CcEEEEEEecccCc-hhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceE
Q 002899 635 AATNNFDPANKVGEGGFGSVYKGILSD----GTVIAVKQLSSKSR-QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQL 709 (869)
Q Consensus 635 ~~t~~f~~~~~IG~G~fG~Vyka~~~~----g~~VAvK~~~~~~~-~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 709 (869)
...++|++.+.||+|+||.||+|.+.. +..||||+++.... ...+.|.+|+.++++++||||+++++++. ++..
T Consensus 387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~ 465 (656)
T 2j0j_A 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV 465 (656)
T ss_dssp CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSC
T ss_pred cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCce
Confidence 345678889999999999999999742 46799999875433 33467999999999999999999999985 4578
Q ss_pred EEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCc
Q 002899 710 LLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLA 789 (869)
Q Consensus 710 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla 789 (869)
++||||+++|+|.+++.... ..+++..+..++.|+++||+|||+++ |+||||||+|||++.++.+||+|||++
T Consensus 466 ~lv~E~~~~g~L~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDikp~NILl~~~~~vkL~DFG~a 538 (656)
T 2j0j_A 466 WIIMELCTLGELRSFLQVRK----FSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLS 538 (656)
T ss_dssp EEEEECCTTCBHHHHHHHTT----TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCCC
T ss_pred EEEEEcCCCCcHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchHhEEEeCCCCEEEEecCCC
Confidence 99999999999999996543 25899999999999999999999998 999999999999999999999999999
Q ss_pred eeecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHc-CCCCCCC
Q 002899 790 KLYEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNY 845 (869)
Q Consensus 790 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~ellt-G~~p~~~ 845 (869)
+..............+|+.|+|||++....++.++||||||+++|||++ |+.||..
T Consensus 539 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~ 595 (656)
T 2j0j_A 539 RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 595 (656)
T ss_dssp CSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred eecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCC
Confidence 8765443333333457789999999998899999999999999999997 9999864
No 254
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.97 E-value=2e-31 Score=316.98 Aligned_cols=280 Identities=18% Similarity=0.183 Sum_probs=192.9
Q ss_pred ceEEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhhcCccccccccc
Q 002899 54 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSI 132 (869)
Q Consensus 54 ~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 132 (869)
.+++.|+++++.++...+..|..+++|++|+|++|.|++.++..|..+ +|++|+|++|.+++..|..|+++++|++|+|
T Consensus 51 ~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 130 (597)
T 3oja_B 51 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 130 (597)
T ss_dssp CCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEe
Confidence 356778888888886666678888999999999999988888888877 7999999999998888888888999999999
Q ss_pred cccccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCC----------------
Q 002899 133 EGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKW---------------- 196 (869)
Q Consensus 133 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l---------------- 196 (869)
++|.|++..+..|..+++|++|+|++|.|++..|..|.++++|++|+|++|++++.....+.++
T Consensus 131 ~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l~~l~~~ 210 (597)
T 3oja_B 131 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIP 210 (597)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSSCCSEEECC
T ss_pred eCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccCccccccCC
Confidence 9999886666667888999999999999988888888888999999999998886543333222
Q ss_pred ---------------------CcccEEEccCCcCCCCchHhhhcCCCCCEEEcCCCCCCCCcccccc-cccceEEEcccc
Q 002899 197 ---------------------KKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLD-KMNLKTLILTKC 254 (869)
Q Consensus 197 ---------------------~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~-~~~L~~L~Ls~N 254 (869)
++|+.|+|++|.+++ +..+..+++|+.|+|++|.+....+..+. ..+|+.|+|++|
T Consensus 211 ~~L~~L~ls~n~l~~~~~~~~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 288 (597)
T 3oja_B 211 IAVEELDASHNSINVVRGPVNVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNN 288 (597)
T ss_dssp TTCSEEECCSSCCCEEECSCCSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTS
T ss_pred chhheeeccCCcccccccccCCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCC
Confidence 124444444444443 24455566666666666666554433332 225666666666
Q ss_pred cCccCCCcccCCCCCcCEEeccCCCCCCCCchhhhcCCCCCEEEeeCCcCCCCCchhhhccCCceeeeccCccCCCCCCC
Q 002899 255 LIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFNSNKNVDISLNNFTWESSDPI 334 (869)
Q Consensus 255 ~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~l~ls~N~~~~~~~~p~ 334 (869)
.|++ +|..+..+++|+.|+|++|.|+ .+|..+..+++|+.|+|++|+|++. |...++.++.|+|++| ||
T Consensus 289 ~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~L~~L~l~~N--------~~ 357 (597)
T 3oja_B 289 RLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-KLSTHHTLKNLTLSHN--------DW 357 (597)
T ss_dssp CCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-CCCTTCCCSEEECCSS--------CE
T ss_pred CCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCc-ChhhcCCCCEEEeeCC--------CC
Confidence 6654 3444455666666666666666 4555556666666666666666533 3333455666666666 88
Q ss_pred CCCCCCccceec
Q 002899 335 ECPRGSVNLVES 346 (869)
Q Consensus 335 ~C~c~~~~~~~~ 346 (869)
.|+|...++..+
T Consensus 358 ~~~~~~~~~~~~ 369 (597)
T 3oja_B 358 DCNSLRALFRNV 369 (597)
T ss_dssp EHHHHHHHTTTC
T ss_pred CChhHHHHHHHH
Confidence 899855544433
No 255
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=4.2e-32 Score=301.33 Aligned_cols=293 Identities=18% Similarity=0.198 Sum_probs=176.0
Q ss_pred eccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhhcCccccccccccccccC
Q 002899 60 ALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFT 138 (869)
Q Consensus 60 ~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 138 (869)
++++++++ .+|..+. ++|++|+|++|.|++.++..|..+ +|++|+|++|++++..+..|.++++|++|+|++|+++
T Consensus 37 ~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~ 113 (353)
T 2z80_A 37 KGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLS 113 (353)
T ss_dssp ECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCS
T ss_pred eCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCC
Confidence 33455555 4444443 356666666666665555555555 5666666666666555556666666666666666666
Q ss_pred CCCCccccCCCCccEEEeecccccccCC-ccccCCCCCCeEeccCC-cCCCCCccccCCCCcccEEEccCCcCCCCchHh
Q 002899 139 GSIPPDIRKLINLQKLILSSNSFTGELP-AELTKLTNLNDLRISDN-NFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPAS 216 (869)
Q Consensus 139 ~~~~~~~~~l~~L~~L~Ls~N~i~~~~p-~~~~~l~~L~~L~Ls~N-~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 216 (869)
+..+..|.++++|++|+|++|++++..+ ..+.++++|++|++++| .++...+..|.++++|++|++++|.+++..|..
T Consensus 114 ~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 193 (353)
T 2z80_A 114 NLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKS 193 (353)
T ss_dssp SCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTT
T ss_pred cCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHH
Confidence 4333335666666666666666663222 24556666666666666 355444555666666666666666666555666
Q ss_pred hhcCCCCCEEEcCCCCCCCCcccccc-cccceEEEcccccCccCCCcccC---CCCCcCEEeccCCCCCC----CCchhh
Q 002899 217 ISALTSLTDLRISDLKGSESAFPKLD-KMNLKTLILTKCLIHGEIPDYIG---DMTKLKNIDLSFNNLTG----GIPTTF 288 (869)
Q Consensus 217 l~~l~~L~~L~L~~n~~~~~~~~~~~-~~~L~~L~Ls~N~i~~~~p~~~~---~l~~L~~L~Ls~N~l~~----~~p~~~ 288 (869)
+..+++|+.|++++|.+...+...+. ..+|+.|+|++|.+++..+..+. ..+.|+.++|++|.+++ .+|..+
T Consensus 194 l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l 273 (353)
T 2z80_A 194 LKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLL 273 (353)
T ss_dssp TTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHH
T ss_pred HhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHH
Confidence 66666666666666665444332222 23566666666666655444332 35567777777777764 356667
Q ss_pred hcCCCCCEEEeeCCcCCCCCchhh---hccCCceeeeccCccCCCCCCCCCCCC-CccceeccCCCCCCCCCCcCccCCC
Q 002899 289 EKLAKTNFMYLTGNKLTGPVPKYI---FNSNKNVDISLNNFTWESSDPIECPRG-SVNLVESYSSPRNKLDKVHPCLRQN 364 (869)
Q Consensus 289 ~~l~~L~~L~Ls~N~l~~~~p~~~---~~~l~~l~ls~N~~~~~~~~p~~C~c~-~~~~~~~l~~~~~~~~~~~~~~~~~ 364 (869)
..+++|+.|+|++|+++ .+|..+ +..++.|++++| ||.|+|+ +.++..|+........ ..
T Consensus 274 ~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N--------~~~~~~~~l~~l~~~~~~~~~~~~-------~~ 337 (353)
T 2z80_A 274 NQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTN--------PWDCSCPRIDYLSRWLNKNSQKEQ-------GS 337 (353)
T ss_dssp HTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSS--------CBCCCHHHHHHHHHHHHHTTTTEE-------SC
T ss_pred hcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCC--------CccCcCCCcHHHHHHHHhccccCC-------CC
Confidence 77777777777777777 455544 346677777777 8889996 7788888876554432 35
Q ss_pred CCCCCCc
Q 002899 365 FPCSAPA 371 (869)
Q Consensus 365 ~~C~~p~ 371 (869)
..|+.|.
T Consensus 338 ~~C~~p~ 344 (353)
T 2z80_A 338 AKCSGSG 344 (353)
T ss_dssp CBBTTTC
T ss_pred cccCCCC
Confidence 5677764
No 256
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.97 E-value=3.9e-31 Score=293.09 Aligned_cols=198 Identities=21% Similarity=0.342 Sum_probs=169.1
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CC-cEEEEEEecccCchhhHHHHHHHHHHHhcCCCc------eeeEEeEEeeCce
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DG-TVIAVKQLSSKSRQGNREFVNEIGMISAQQHPN------LVKLYGCCVEGNQ 708 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g-~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~n------Iv~l~~~~~~~~~ 708 (869)
.++|++.+.||+|+||.||+|... ++ +.||||+++.. ......+.+|++++++++|++ ++.+++++...+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 568999999999999999999975 34 68999998753 334567888999999887766 8999999999999
Q ss_pred EEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEE-------------
Q 002899 709 LLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLL------------- 775 (869)
Q Consensus 709 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl------------- 775 (869)
.++||||+ ++++.+.+..... ..+++..+..++.||++||+|||+.+ |+||||||+|||+
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~~~---~~~~~~~~~~i~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~ 169 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKENNF---QPYPLPHVRHMAYQLCHALRFLHENQ---LTHTDLKPENILFVNSEFETLYNEHK 169 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHTTT---CCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEESCCCEEEEECCC-
T ss_pred EEEEEecc-CCChHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecccccccccccc
Confidence 99999999 5566666654321 25899999999999999999999997 9999999999999
Q ss_pred ------cCCCcEEEeecCCceeecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 002899 776 ------DKDLNAKISDFGLAKLYEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNYR 846 (869)
Q Consensus 776 ------~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~ 846 (869)
+.++.+||+|||++....... ....||+.|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 170 ~~~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 242 (355)
T 2eu9_A 170 SCEEKSVKNTSIRVADFGSATFDHEHH----TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTH 242 (355)
T ss_dssp CCCEEEESCCCEEECCCTTCEETTSCC----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccccCCCcEEEeecCccccccccc----cCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCC
Confidence 678899999999998654322 2357899999999999989999999999999999999999999754
No 257
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.97 E-value=2.3e-31 Score=287.92 Aligned_cols=195 Identities=28% Similarity=0.473 Sum_probs=162.2
Q ss_pred HhcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCceeeEEeEEee---------
Q 002899 636 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVE--------- 705 (869)
Q Consensus 636 ~t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~--------- 705 (869)
..++|++.+.||+|+||.||+|+.. +++.||||++... ....+.+.+|++++++++||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 3567889999999999999999975 7899999998643 3345678999999999999999999998865
Q ss_pred ----CceEEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcE
Q 002899 706 ----GNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNA 781 (869)
Q Consensus 706 ----~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~ 781 (869)
.+..++||||+++|+|.+++.... ..+++..+..++.|+++||+|||+++ |+||||||+|||++.++.+
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dlkp~Nil~~~~~~~ 155 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSEN----LNQQRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNV 155 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHSC----GGGCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCE
T ss_pred ccccCCceEEEEecCCCCCHHHhhhccc----cccchHHHHHHHHHHHHHHHHHHhCC---eecccCCHHhEEEcCCCCE
Confidence 457899999999999999997543 25788999999999999999999998 9999999999999999999
Q ss_pred EEeecCCceeecCCC-------------ccccccccccccccchhhcccC-CCCchhHHHHHHHHHHHHHc
Q 002899 782 KISDFGLAKLYEEDK-------------THISTRIAGTIGYMAPEYAMRG-YLTSKADVYSFGVVTLEIVS 838 (869)
Q Consensus 782 kl~DFGla~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~~~k~DvwSlGvil~ellt 838 (869)
||+|||++....... ........||+.|+|||++.+. .++.++||||||+++|||++
T Consensus 156 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~ 226 (303)
T 1zy4_A 156 KIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY 226 (303)
T ss_dssp EECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS
T ss_pred EEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh
Confidence 999999997654321 1112235689999999998754 78999999999999999998
No 258
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.97 E-value=1e-31 Score=292.68 Aligned_cols=200 Identities=26% Similarity=0.392 Sum_probs=163.3
Q ss_pred HHHhcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCc------hhhHHHHHHHHHHHhc----CCCceeeEEeE
Q 002899 634 KAATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR------QGNREFVNEIGMISAQ----QHPNLVKLYGC 702 (869)
Q Consensus 634 ~~~t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~------~~~~~f~~E~~~l~~l----~H~nIv~l~~~ 702 (869)
....++|++.+.||+|+||.||+|... +++.||||+++.... .....+..|++++.++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 445678999999999999999999864 688999999865432 1234566789998888 89999999999
Q ss_pred EeeCceEEEEEEe-ccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEc-CCCc
Q 002899 703 CVEGNQLLLVYEY-MKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLD-KDLN 780 (869)
Q Consensus 703 ~~~~~~~~lV~E~-~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~-~~~~ 780 (869)
+...+..++|||| +.+++|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+||+++ .++.
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~ 178 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITEKG-----PLGEGPSRCFFGQVVAAIQHCHSRG---VVHRDIKDENILIDLRRGC 178 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHHT---EECCCCSGGGEEEETTTTE
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChhhEEEeCCCCe
Confidence 9999999999999 78999999986542 5899999999999999999999998 99999999999999 8899
Q ss_pred EEEeecCCceeecCCCccccccccccccccchhhcccCCC-CchhHHHHHHHHHHHHHcCCCCCC
Q 002899 781 AKISDFGLAKLYEEDKTHISTRIAGTIGYMAPEYAMRGYL-TSKADVYSFGVVTLEIVSGKSNTN 844 (869)
Q Consensus 781 ~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~k~DvwSlGvil~elltG~~p~~ 844 (869)
+||+|||++....... .....|++.|+|||++....+ +.++||||||+++|||++|+.||.
T Consensus 179 ~kl~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 240 (312)
T 2iwi_A 179 AKLIDFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFE 240 (312)
T ss_dssp EEECCCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCC
T ss_pred EEEEEcchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCC
Confidence 9999999998775432 224568999999999876655 458999999999999999999985
No 259
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.97 E-value=1.8e-31 Score=296.29 Aligned_cols=195 Identities=27% Similarity=0.422 Sum_probs=165.7
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccC--chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCce-----
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQ----- 708 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~----- 708 (869)
.++|.+.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+.+++.++||||+++++++...+.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 467888999999999999999975 68999999986543 2335678899999999999999999999987654
Q ss_pred -EEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecC
Q 002899 709 -LLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFG 787 (869)
Q Consensus 709 -~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFG 787 (869)
.++||||++ ++|.+.+.. .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg 171 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL-------KFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFG 171 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS-------CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTCCEEECSTT
T ss_pred eEEEEecccc-CCHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEeECCCCcEEEeecc
Confidence 499999998 588776632 4899999999999999999999998 9999999999999999999999999
Q ss_pred CceeecCCCccccccccccccccchhhccc-CCCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 002899 788 LAKLYEEDKTHISTRIAGTIGYMAPEYAMR-GYLTSKADVYSFGVVTLEIVSGKSNTNYR 846 (869)
Q Consensus 788 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DvwSlGvil~elltG~~p~~~~ 846 (869)
++...... .....||+.|+|||++.+ ..++.++||||||+++|||++|+.||...
T Consensus 172 ~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 227 (353)
T 3coi_A 172 LARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK 227 (353)
T ss_dssp CTTC------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSS
T ss_pred cccCCCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 99765432 223468999999999876 67899999999999999999999999653
No 260
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.97 E-value=2.6e-31 Score=296.98 Aligned_cols=198 Identities=24% Similarity=0.338 Sum_probs=167.8
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCchhhHHHHHHHHHHHhcC-----------CCceeeEEeEEe
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQ-----------HPNLVKLYGCCV 704 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~-----------H~nIv~l~~~~~ 704 (869)
.++|.+.+.||+|+||.||+|... +++.||||++... ......+.+|++++++++ ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 357889999999999999999974 6899999998743 334567888999988876 899999999998
Q ss_pred eCc----eEEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhc-CCCCeEEcCCCCCCEEEc---
Q 002899 705 EGN----QLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHED-SRIKIVHRDIKTSNVLLD--- 776 (869)
Q Consensus 705 ~~~----~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~iiH~Dlk~~NILl~--- 776 (869)
..+ ..++||||+ +++|.+++..... ..+++..+..++.||+.||+|||++ + |+||||||+|||++
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~---~~~~~~~~~~i~~qi~~aL~~lH~~~~---ivH~Dikp~NIll~~~~ 169 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYEH---RGIPLIYVKQISKQLLLGLDYMHRRCG---IIHTDIKPENVLMEIVD 169 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTTT---SCCCHHHHHHHHHHHHHHHHHHHHTTC---EECSCCSGGGEEEEEEE
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhhc---cCCcHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChHHeEEeccC
Confidence 654 789999999 8899998865432 2589999999999999999999998 7 99999999999994
Q ss_pred ---CCCcEEEeecCCceeecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 002899 777 ---KDLNAKISDFGLAKLYEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNYR 846 (869)
Q Consensus 777 ---~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~ 846 (869)
..+.+||+|||++....... ....||+.|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 170 ~~~~~~~~kl~Dfg~a~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 238 (373)
T 1q8y_A 170 SPENLIQIKIADLGNACWYDEHY----TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPD 238 (373)
T ss_dssp TTTTEEEEEECCCTTCEETTBCC----CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---
T ss_pred CCcCcceEEEcccccccccCCCC----CCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 34589999999998765322 2346899999999999999999999999999999999999999753
No 261
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.97 E-value=3.6e-31 Score=313.07 Aligned_cols=133 Identities=23% Similarity=0.256 Sum_probs=82.2
Q ss_pred ceEEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhhcCccccccccc
Q 002899 54 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSI 132 (869)
Q Consensus 54 ~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 132 (869)
.+++.|+|++|++++..+.+|.++++|++|+|++|.|+++.+..|..+ +|++|+|++|++++..+..|.++++|++|+|
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 356667777777666666666666677777777666666666666655 6666666666666665566666666666666
Q ss_pred cccccCCCCCccccCCCCccEEEeecccccc-cCCccccCCCCCCeEeccCCcCC
Q 002899 133 EGNLFTGSIPPDIRKLINLQKLILSSNSFTG-ELPAELTKLTNLNDLRISDNNFS 186 (869)
Q Consensus 133 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~-~~p~~~~~l~~L~~L~Ls~N~l~ 186 (869)
++|++++..+..|+++++|++|+|++|.+++ .+|..|.++++|++|++++|+++
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~ 162 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ 162 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCC
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccc
Confidence 6666664444445566666666666665554 24555555555555555555443
No 262
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.97 E-value=1.5e-31 Score=292.73 Aligned_cols=200 Identities=23% Similarity=0.375 Sum_probs=171.7
Q ss_pred HHHhcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCch------hhHHHHHHHHHHHhcC--CCceeeEEeEEe
Q 002899 634 KAATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQ------GNREFVNEIGMISAQQ--HPNLVKLYGCCV 704 (869)
Q Consensus 634 ~~~t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~~------~~~~f~~E~~~l~~l~--H~nIv~l~~~~~ 704 (869)
....++|++.+.||+|+||.||+|... +++.||||++...... ....+..|++++++++ ||||+++++++.
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~ 118 (320)
T 3a99_A 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE 118 (320)
T ss_dssp -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence 344678999999999999999999964 6889999998654321 2356778999999996 599999999999
Q ss_pred eCceEEEEEEeccC-CchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEc-CCCcEE
Q 002899 705 EGNQLLLVYEYMKN-NCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLD-KDLNAK 782 (869)
Q Consensus 705 ~~~~~~lV~E~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~-~~~~~k 782 (869)
..+..++|||++.+ ++|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+|||++ +++.+|
T Consensus 119 ~~~~~~lv~e~~~~~~~L~~~l~~~~-----~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~k 190 (320)
T 3a99_A 119 RPDSFVLILERPEPVQDLFDFITERG-----ALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELK 190 (320)
T ss_dssp CSSEEEEEEECCSSEEEHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEE
T ss_pred cCCcEEEEEEcCCCCccHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHCC---cEeCCCCHHHEEEeCCCCCEE
Confidence 99999999999986 89999886532 6899999999999999999999998 99999999999999 789999
Q ss_pred EeecCCceeecCCCccccccccccccccchhhcccCCC-CchhHHHHHHHHHHHHHcCCCCCC
Q 002899 783 ISDFGLAKLYEEDKTHISTRIAGTIGYMAPEYAMRGYL-TSKADVYSFGVVTLEIVSGKSNTN 844 (869)
Q Consensus 783 l~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~k~DvwSlGvil~elltG~~p~~ 844 (869)
|+|||++....... .....||+.|+|||++....+ +.++||||||+++|||++|+.||.
T Consensus 191 L~Dfg~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~ 250 (320)
T 3a99_A 191 LIDFGSGALLKDTV---YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 250 (320)
T ss_dssp ECCCTTCEECCSSC---BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCC
T ss_pred EeeCcccccccccc---ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCC
Confidence 99999998765432 223568999999999876655 788999999999999999999985
No 263
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.97 E-value=1.8e-31 Score=287.00 Aligned_cols=257 Identities=19% Similarity=0.238 Sum_probs=186.6
Q ss_pred EEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhhcCcccccccccccc
Q 002899 57 VTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGN 135 (869)
Q Consensus 57 ~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 135 (869)
+.+++++++++ .+|..+ .++|++|+|++|.|++..+..|..+ +|++|+|++|.+++..+..|..+++|++|+|++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 67888889988 556544 4688999999988887777666666 6777777777777666777777777777777777
Q ss_pred c-cCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcCCCCch
Q 002899 136 L-FTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIP 214 (869)
Q Consensus 136 ~-l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 214 (869)
. ++...+..|..+++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|..+++|+.|+|++|++++..+
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 170 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPE 170 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECT
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCH
Confidence 5 665556667777777777777777776666667777777777777777776666666677777777777777665555
Q ss_pred HhhhcCCCCCEEEcCCCCCCCCcccccccccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCCCchhhhcCCCC
Q 002899 215 ASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKT 294 (869)
Q Consensus 215 ~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 294 (869)
..+..+++|+.|+| ++|.|++..|..|..+++|+.|+|++|++++..+..+..+++|
T Consensus 171 ~~~~~l~~L~~L~l-----------------------~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 227 (285)
T 1ozn_A 171 RAFRGLHSLDRLLL-----------------------HQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRAL 227 (285)
T ss_dssp TTTTTCTTCCEEEC-----------------------CSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTC
T ss_pred HHhcCccccCEEEC-----------------------CCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCccc
Confidence 55555555554444 4666666677778888888888888888887777778888888
Q ss_pred CEEEeeCCcCCCCCchhhhccCCceeeeccCccCCCCCCCCCCCCCccceeccCCCCCCCCCCcCccCCCCCCCCCcccc
Q 002899 295 NFMYLTGNKLTGPVPKYIFNSNKNVDISLNNFTWESSDPIECPRGSVNLVESYSSPRNKLDKVHPCLRQNFPCSAPADQY 374 (869)
Q Consensus 295 ~~L~Ls~N~l~~~~p~~~~~~l~~l~ls~N~~~~~~~~p~~C~c~~~~~~~~l~~~~~~~~~~~~~~~~~~~C~~p~~~~ 374 (869)
+.|+|++| ||.|+|...++..|++..... .....|+.|+..+
T Consensus 228 ~~L~l~~N------------------------------~~~c~~~~~~~~~~l~~~~~~--------~~~~~c~~p~~l~ 269 (285)
T 1ozn_A 228 QYLRLNDN------------------------------PWVCDCRARPLWAWLQKFRGS--------SSEVPCSLPQRLA 269 (285)
T ss_dssp CEEECCSS------------------------------CEECSGGGHHHHHHHHHCCSE--------ECCCBEEESGGGT
T ss_pred CEEeccCC------------------------------CccCCCCcHHHHHHHHhcccc--------cCccccCCchHhC
Confidence 88888888 777999999999998764422 2345688887776
Q ss_pred cce
Q 002899 375 HYT 377 (869)
Q Consensus 375 ~~~ 377 (869)
|..
T Consensus 270 g~~ 272 (285)
T 1ozn_A 270 GRD 272 (285)
T ss_dssp TCB
T ss_pred CcC
Confidence 644
No 264
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.97 E-value=3.8e-31 Score=306.04 Aligned_cols=279 Identities=21% Similarity=0.268 Sum_probs=216.9
Q ss_pred eEecCCCCcceEEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhhcC
Q 002899 45 VTCDCSSATCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTN 123 (869)
Q Consensus 45 v~C~~~~~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~ 123 (869)
..|.|... .+.+++++++++ .+|..+. ++|+.|+|++|+|++..+..|..+ +|++|+|++|.++++.|..|.+
T Consensus 5 ~~C~C~~~---~~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~ 78 (477)
T 2id5_A 5 PRCECSAQ---DRAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNN 78 (477)
T ss_dssp TTCEEETT---TTEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTT
T ss_pred CCCeECCC---CCEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhC
Confidence 34555432 235788888888 6777664 689999999999999999999888 8999999999999999999999
Q ss_pred ccccccccccccccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEE
Q 002899 124 ITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLH 203 (869)
Q Consensus 124 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 203 (869)
+++|++|+|++|+++...+..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|+.|+
T Consensus 79 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 158 (477)
T 2id5_A 79 LFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLT 158 (477)
T ss_dssp CTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEE
T ss_pred CccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEE
Confidence 99999999999999977777789999999999999999988899999999999999999999998899999999999999
Q ss_pred ccCCcCCCCchHhhhcCCCCCEEEcCCCCCCCCcccccccc-cc------------------------eEEEcccccCcc
Q 002899 204 IQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKM-NL------------------------KTLILTKCLIHG 258 (869)
Q Consensus 204 L~~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~-~L------------------------~~L~Ls~N~i~~ 258 (869)
|++|++++..+..+.++++|+.|+|++|.+.......+... +| +.|+|++|+|+.
T Consensus 159 l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~ 238 (477)
T 2id5_A 159 LEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTA 238 (477)
T ss_dssp EESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCS
T ss_pred CCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccc
Confidence 99999998888999999999999999999887654333222 44 445555555554
Q ss_pred CCCcccCCCCCcCEEeccCCCCCCCCchhhhcCCCCCEEEeeCCcCCCCCchhh--hccCCceeeeccCccCC
Q 002899 259 EIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYI--FNSNKNVDISLNNFTWE 329 (869)
Q Consensus 259 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~--~~~l~~l~ls~N~~~~~ 329 (869)
..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++++..|..+ +..|+.|+|++|+++..
T Consensus 239 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 311 (477)
T 2id5_A 239 VPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTL 311 (477)
T ss_dssp CCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCC
T ss_pred cCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCcee
Confidence 333445555555555555555555555555555555555555555555545444 34555555555555544
No 265
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.97 E-value=3.3e-31 Score=292.08 Aligned_cols=197 Identities=23% Similarity=0.301 Sum_probs=146.9
Q ss_pred HhcCCCCCC-eeeccCceEEEEEEEc-CCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCceeeEEeEEee----CceE
Q 002899 636 ATNNFDPAN-KVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVE----GNQL 709 (869)
Q Consensus 636 ~t~~f~~~~-~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~----~~~~ 709 (869)
..++|.+.+ +||+|+||.||+|... +++.||||++.... ....+....+..++||||+++++++.. +...
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 101 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL 101 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence 356788854 6999999999999986 68999999986431 122223344667899999999999876 4568
Q ss_pred EEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcC---CCcEEEeec
Q 002899 710 LLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDK---DLNAKISDF 786 (869)
Q Consensus 710 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~---~~~~kl~DF 786 (869)
++||||+++|+|.+++..... ..+++..+..++.|++.||+|||+++ |+||||||+|||++. ++.+||+||
T Consensus 102 ~lv~e~~~gg~L~~~l~~~~~---~~l~~~~~~~i~~ql~~~l~~LH~~~---ivH~dlkp~NIll~~~~~~~~~kl~Df 175 (336)
T 3fhr_A 102 LIIMECMEGGELFSRIQERGD---QAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDF 175 (336)
T ss_dssp EEEEECCTTEEHHHHHHTC-C---CCCBHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCC
T ss_pred EEEEeccCCCCHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEEecCCCceEEEecc
Confidence 999999999999999976532 36899999999999999999999998 999999999999976 455999999
Q ss_pred CCceeecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 787 GLAKLYEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 787 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
|++....... .....||+.|+|||++....++.++||||||+++|||++|+.||..
T Consensus 176 g~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 231 (336)
T 3fhr_A 176 GFAKETTQNA---LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYS 231 (336)
T ss_dssp TTCEEC-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC--
T ss_pred ccceeccccc---cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 9998665322 2235689999999999888899999999999999999999999954
No 266
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.97 E-value=1.1e-31 Score=293.23 Aligned_cols=201 Identities=23% Similarity=0.403 Sum_probs=166.4
Q ss_pred HHhcCCCCCCeeeccCceEEEEEEEcCCcEEEEEEecccC--chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEE
Q 002899 635 AATNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLV 712 (869)
Q Consensus 635 ~~t~~f~~~~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 712 (869)
...++|++.+.||+|+||.||+|.... .||+|+++... ....+.|.+|++++++++||||+++++++.+.+..++|
T Consensus 30 i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv 107 (319)
T 2y4i_B 30 IPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAII 107 (319)
T ss_dssp SCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEE
T ss_pred CCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEE
Confidence 345678899999999999999999754 48999886542 23345688899999999999999999999999999999
Q ss_pred EEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceee
Q 002899 713 YEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 792 (869)
Q Consensus 713 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~ 792 (869)
|||+++++|.+++.... ..+++..+..++.|+++||+|||+++ |+||||||+|||++ ++.+||+|||++...
T Consensus 108 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~ 179 (319)
T 2y4i_B 108 TSLCKGRTLYSVVRDAK----IVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYD-NGKVVITDFGLFSIS 179 (319)
T ss_dssp CBCCCSEEHHHHTTSSC----CCCCSHHHHHHHHHHHHHHHHHHHTT---CCCCCCCSTTEEEC---CCEECCCSCCC--
T ss_pred eecccCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChhhEEEe-CCCEEEeecCCcccc
Confidence 99999999999996543 35899999999999999999999998 99999999999998 679999999998765
Q ss_pred cCCC----ccccccccccccccchhhccc---------CCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 793 EEDK----THISTRIAGTIGYMAPEYAMR---------GYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 793 ~~~~----~~~~~~~~gt~~y~aPE~~~~---------~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
.... ........|++.|+|||++.. ..++.++||||||+++|||++|+.||..
T Consensus 180 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 245 (319)
T 2y4i_B 180 GVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKT 245 (319)
T ss_dssp --------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSS
T ss_pred ccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 3211 111223458999999999864 3578999999999999999999999964
No 267
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.97 E-value=4e-31 Score=301.63 Aligned_cols=200 Identities=28% Similarity=0.340 Sum_probs=156.6
Q ss_pred CCCCCCeeeccCceEEEEEEEcCCcEEEEEEecccCchhhHHHHHHHHHHHhc-CCCceeeEEeEEeeCceEEEEEEecc
Q 002899 639 NFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQLLLVYEYMK 717 (869)
Q Consensus 639 ~f~~~~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~E~~~ 717 (869)
.|...++||+|+||+||.+...+|+.||||++... ....+.+|++++.++ +|||||++++++.+++..++||||++
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~ 92 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN 92 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC
Confidence 34456889999999998776678999999998643 235678899999876 89999999999999999999999996
Q ss_pred CCchhhhhhcCCcccc--cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCC-------------CcEE
Q 002899 718 NNCLSRAIFGKDTEYR--LKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKD-------------LNAK 782 (869)
Q Consensus 718 ~gsL~~~l~~~~~~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~-------------~~~k 782 (869)
|+|.+++........ ....+..+..++.||+.||+|||+++ |+||||||+|||++.+ +.+|
T Consensus 93 -gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~k 168 (434)
T 2rio_A 93 -LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRIL 168 (434)
T ss_dssp -EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEECCHHHHSCCTTCCCSCEEE
T ss_pred -CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCcccccccccCCCceEEE
Confidence 699999976532111 01234456789999999999999998 9999999999999754 4899
Q ss_pred EeecCCceeecCCCccc---cccccccccccchhhccc-------CCCCchhHHHHHHHHHHHHHc-CCCCCCC
Q 002899 783 ISDFGLAKLYEEDKTHI---STRIAGTIGYMAPEYAMR-------GYLTSKADVYSFGVVTLEIVS-GKSNTNY 845 (869)
Q Consensus 783 l~DFGla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~-------~~~~~k~DvwSlGvil~ellt-G~~p~~~ 845 (869)
|+|||+++......... .....||+.|+|||++.+ ..++.++|||||||++|||++ |+.||..
T Consensus 169 L~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~ 242 (434)
T 2rio_A 169 ISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 242 (434)
T ss_dssp ECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCS
T ss_pred EcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCC
Confidence 99999998876433221 223579999999999865 578999999999999999999 9999964
No 268
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.97 E-value=3.3e-32 Score=300.05 Aligned_cols=191 Identities=22% Similarity=0.243 Sum_probs=161.1
Q ss_pred hcCCCCCCeeeccCceEEEEEEEcCCcEEEEEEecccCc--------hhhHHHHHHHHHHHhcC---------CCceeeE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSR--------QGNREFVNEIGMISAQQ---------HPNLVKL 699 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~~--------~~~~~f~~E~~~l~~l~---------H~nIv~l 699 (869)
.++|++.+.||+|+||.||+|+. +|+.||||++..... ...+.+.+|+++++.++ |||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 35678899999999999999998 689999999875421 22367889999988875 8888888
Q ss_pred EeEEe------------------------------eCceEEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHH
Q 002899 700 YGCCV------------------------------EGNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIA 749 (869)
Q Consensus 700 ~~~~~------------------------------~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia 749 (869)
.+.+. ..+..++||||+++|++.+.+... .+++..++.++.||+
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~------~~~~~~~~~i~~qi~ 171 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTK------LSSLATAKSILHQLT 171 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTT------CCCHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhc------CCCHHHHHHHHHHHH
Confidence 77643 267899999999999877766432 579999999999999
Q ss_pred HHHHHHH-hcCCCCeEEcCCCCCCEEEcCCC--------------------cEEEeecCCceeecCCCcccccccccccc
Q 002899 750 RGLAYLH-EDSRIKIVHRDIKTSNVLLDKDL--------------------NAKISDFGLAKLYEEDKTHISTRIAGTIG 808 (869)
Q Consensus 750 ~gL~yLH-~~~~~~iiH~Dlk~~NILl~~~~--------------------~~kl~DFGla~~~~~~~~~~~~~~~gt~~ 808 (869)
.||+||| +.+ |+||||||+|||++.++ .+||+|||+|+..... ...||+.
T Consensus 172 ~aL~~lH~~~~---ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~ 242 (336)
T 2vuw_A 172 ASLAVAEASLR---FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDV 242 (336)
T ss_dssp HHHHHHHHHHC---CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCC
T ss_pred HHHHHHHHhCC---EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeec
Confidence 9999999 887 99999999999999887 8999999999876532 2478999
Q ss_pred ccchhhcccCCCCchhHHHHHHHH-HHHHHcCCCCCC
Q 002899 809 YMAPEYAMRGYLTSKADVYSFGVV-TLEIVSGKSNTN 844 (869)
Q Consensus 809 y~aPE~~~~~~~~~k~DvwSlGvi-l~elltG~~p~~ 844 (869)
|+|||++.+.. +.++||||++++ .+++++|..||.
T Consensus 243 y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~ 278 (336)
T 2vuw_A 243 SMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYS 278 (336)
T ss_dssp TTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHH
T ss_pred ccChhhhcCCC-ccceehhhhhCCCCcccccccCCCc
Confidence 99999998766 899999998776 888999999883
No 269
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.97 E-value=5.1e-31 Score=317.88 Aligned_cols=192 Identities=22% Similarity=0.377 Sum_probs=166.2
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc--CCcEEEEEEecccC-chhhHHHHHHHHHHHhcCCCceeeEEeEEeeCce-----
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS--DGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQ----- 708 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~--~g~~VAvK~~~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~----- 708 (869)
.++|++.+.||+|+||.||+|... +++.||||++.... ......|.+|++++++++||||+++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 478999999999999999999975 58999999986543 3445678999999999999999999999987665
Q ss_pred EEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCC
Q 002899 709 LLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGL 788 (869)
Q Consensus 709 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGl 788 (869)
.|+||||+++++|.+++.. .+++..++.++.||++||+|||+++ |+||||||+|||++.+ .+||+|||+
T Consensus 159 ~~lv~E~~~g~~L~~~~~~-------~l~~~~~~~~~~qi~~aL~~lH~~g---iiHrDlkp~NIll~~~-~~kl~DFG~ 227 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ-------KLPVAEAIAYLLEILPALSYLHSIG---LVYNDLKPENIMLTEE-QLKLIDLGA 227 (681)
T ss_dssp EEEEEECCCCEECC----C-------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECSS-CEEECCCTT
T ss_pred eEEEEEeCCCCcHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHHCC---CeecccChHHeEEeCC-cEEEEeccc
Confidence 7999999999999876633 5899999999999999999999998 9999999999999986 899999999
Q ss_pred ceeecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 789 AKLYEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 789 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
++..... ....||+.|+|||++.+.. +.++|||||||++|||++|.+|+..
T Consensus 228 a~~~~~~-----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~ 278 (681)
T 2pzi_A 228 VSRINSF-----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNG 278 (681)
T ss_dssp CEETTCC-----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETT
T ss_pred chhcccC-----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcc
Confidence 9876543 2356999999999987665 8999999999999999999988753
No 270
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.97 E-value=7.4e-31 Score=298.80 Aligned_cols=198 Identities=26% Similarity=0.355 Sum_probs=158.6
Q ss_pred hcCCCCCCeeeccCceEEEEEEEcCCcEEEEEEecccCchhhHHHHHHHHHHHhc-CCCceeeEEeEEeeCceEEEEEEe
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQLLLVYEY 715 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~E~ 715 (869)
..+|.+.++||+|+||+||.....+++.||||++..... ..+.+|+++++.+ +|||||++++++.+.+..++||||
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~ 99 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL 99 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEEC
Confidence 345778899999999987655556789999999865432 3466899999998 899999999999999999999999
Q ss_pred ccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcC-----CCcEEEeecCCce
Q 002899 716 MKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDK-----DLNAKISDFGLAK 790 (869)
Q Consensus 716 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~-----~~~~kl~DFGla~ 790 (869)
++ |+|.+++..... ...+..+..++.||++||+|||+.+ |+||||||+|||++. ...+||+|||+++
T Consensus 100 ~~-g~L~~~l~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~ 171 (432)
T 3p23_A 100 CA-ATLQEYVEQKDF----AHLGLEPITLLQQTTSGLAHLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCK 171 (432)
T ss_dssp CS-EEHHHHHHSSSC----CCCSSCHHHHHHHHHHHHHHHHHTT---CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEE
T ss_pred CC-CCHHHHHHhcCC----CccchhHHHHHHHHHHHHHHHHHCc---CEeCCCCHHHEEEecCCCCCceeEEEeccccee
Confidence 97 599999876542 3445567899999999999999998 999999999999953 3468899999998
Q ss_pred eecCCCc--cccccccccccccchhhcc---cCCCCchhHHHHHHHHHHHHHc-CCCCCCC
Q 002899 791 LYEEDKT--HISTRIAGTIGYMAPEYAM---RGYLTSKADVYSFGVVTLEIVS-GKSNTNY 845 (869)
Q Consensus 791 ~~~~~~~--~~~~~~~gt~~y~aPE~~~---~~~~~~k~DvwSlGvil~ellt-G~~p~~~ 845 (869)
....... .......||+.|+|||++. ...++.++|||||||++|||++ |+.||..
T Consensus 172 ~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~ 232 (432)
T 3p23_A 172 KLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGK 232 (432)
T ss_dssp CC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBS
T ss_pred eccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcch
Confidence 7654321 1223457999999999987 4567889999999999999999 9999853
No 271
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.97 E-value=1.1e-30 Score=285.09 Aligned_cols=199 Identities=29% Similarity=0.493 Sum_probs=149.9
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCch-hh-HHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQ-GN-REFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 713 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~~-~~-~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 713 (869)
.++|++.+.||+|+||.||+|... +++.||||++...... .. +.+.++..+++.++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 356788899999999999999985 6899999998755322 22 33445556788889999999999999999999999
Q ss_pred EeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhc-CCCCeEEcCCCCCCEEEcCCCcEEEeecCCceee
Q 002899 714 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHED-SRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 792 (869)
Q Consensus 714 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~ 792 (869)
||+ ++.+..+.... ...+++..+..++.|+++||+|||+. + |+||||||+||+++.++.+||+|||++...
T Consensus 104 e~~-~~~~~~l~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~ 175 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRM----QGPIPERILGKMTVAIVKALYYLKEKHG---VIHRDVKPSNILLDERGQIKLCDFGISGRL 175 (318)
T ss_dssp CCC-SEEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHHHC---CCCCCCCGGGEEECTTSCEEECCCTTC---
T ss_pred ecc-CCcHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHhhCC---EEeCCCCHHHEEECCCCCEEEEECCCchhc
Confidence 999 44554444321 23689999999999999999999985 7 999999999999999999999999999766
Q ss_pred cCCCccccccccccccccchhhcc-----cCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 793 EEDKTHISTRIAGTIGYMAPEYAM-----RGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 793 ~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
..... .....||+.|+|||++. ...++.++||||||+++|||++|+.||..
T Consensus 176 ~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 231 (318)
T 2dyl_A 176 VDDKA--KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKN 231 (318)
T ss_dssp -------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cCCcc--ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCC
Confidence 44322 22356899999999984 45788999999999999999999999964
No 272
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=8.8e-31 Score=287.44 Aligned_cols=269 Identities=20% Similarity=0.310 Sum_probs=191.3
Q ss_pred cHHHHHHHHHHhCCCCCCCCCCCCCCCCCccccC--CCCCCCCcceEecC------CCCcceEEEEeccCCCccccCCcc
Q 002899 2 PKKALKQIGRKLGKKDWNFGVDPCSQKGNWELSS--DDKKGFESNVTCDC------SSATCHVVTIALKAQNLTGTLPTE 73 (869)
Q Consensus 2 ~~~~l~~~~~~l~~~~W~~~~d~C~~~g~w~~~~--~~~~~~~~~v~C~~------~~~~~~v~~L~l~~~~l~~~~p~~ 73 (869)
+++||+++|+.+.. |+|.|.+.|+... ......|.|+.|+. .....+|+.|+|++|+++ .+|+.
T Consensus 28 ~~~aLl~~k~~~~~-------~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~ 99 (328)
T 4fcg_A 28 YHDVLSQWQRHYNA-------DRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQ 99 (328)
T ss_dssp HHHHHHHHHHHHHH-------CCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSC
T ss_pred HHHHHHHHHHhccC-------CchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChh
Confidence 57899999998732 2233333332110 01111223466742 112357888999999888 77888
Q ss_pred ccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhhcCccccccccccccccCCCCCccccC-----
Q 002899 74 LSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRK----- 147 (869)
Q Consensus 74 l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~----- 147 (869)
+.++++|++|+|++|.|+ .+|..+..+ +|++|+|++|+++ .+|..+.++++|++|+|++|++.+.+|..+..
T Consensus 100 l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~ 177 (328)
T 4fcg_A 100 AFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASG 177 (328)
T ss_dssp GGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CC
T ss_pred hhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchh
Confidence 888999999999998888 556666665 7888888888888 66777888888888888888777777776654
Q ss_pred ----CCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcCCCCchHhhhcCCCC
Q 002899 148 ----LINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSL 223 (869)
Q Consensus 148 ----l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L 223 (869)
+++|++|+|++|+|+ .+|..+.++++|++|+|++|++++ +|..+..+++|+.|+|++|.+.+.+|..+..+++|
T Consensus 178 ~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L 255 (328)
T 4fcg_A 178 EHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPL 255 (328)
T ss_dssp CEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCC
T ss_pred hhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCC
Confidence 777777777777777 666677777777777777777774 44456777777777777777776666666666655
Q ss_pred CEEEcCCCCCCCCcccccccccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCCCchhhhcCCCCCEEEeeCCc
Q 002899 224 TDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNK 303 (869)
Q Consensus 224 ~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 303 (869)
+.|+|+ +|.+.+.+|..+..+++|+.|+|++|++.+.+|..+..+++|+.+++..|.
T Consensus 256 ~~L~L~-----------------------~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~ 312 (328)
T 4fcg_A 256 KRLILK-----------------------DCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHL 312 (328)
T ss_dssp CEEECT-----------------------TCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGG
T ss_pred CEEECC-----------------------CCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHH
Confidence 555544 566666777778888888888888888888888888888888888888776
Q ss_pred CC
Q 002899 304 LT 305 (869)
Q Consensus 304 l~ 305 (869)
+.
T Consensus 313 ~~ 314 (328)
T 4fcg_A 313 QA 314 (328)
T ss_dssp SC
T ss_pred HH
Confidence 54
No 273
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=3.9e-30 Score=282.70 Aligned_cols=266 Identities=20% Similarity=0.283 Sum_probs=229.7
Q ss_pred cceEEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhhcCcccccccc
Q 002899 53 TCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLS 131 (869)
Q Consensus 53 ~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 131 (869)
.|+++.+++++++++ .+|..+. ++|+.|+|++|.|++..+..|..+ +|++|+|++|++++..|..|.++++|++|+
T Consensus 30 ~c~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (330)
T 1xku_A 30 QCHLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLY 106 (330)
T ss_dssp EEETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEE
T ss_pred cCCCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEE
Confidence 346788999999998 5676664 689999999999999988888887 899999999999988899999999999999
Q ss_pred ccccccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCC--CCccccCCCCcccEEEccCCcC
Q 002899 132 IEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSG--KIPEFIGKWKKIQKLHIQGSSL 209 (869)
Q Consensus 132 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~L~~N~l 209 (869)
|++|+++ .+|..+. ++|++|++++|++++..+..|.++++|++|+|++|+++. ..+..|.++++|+.|++++|.+
T Consensus 107 Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l 183 (330)
T 1xku_A 107 LSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNI 183 (330)
T ss_dssp CCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCC
T ss_pred CCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcc
Confidence 9999999 5666554 799999999999998777789999999999999999964 6788899999999999999999
Q ss_pred CCCchHhhhcCCCCCEEEcCCCCCCCCccccccc-ccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCCCchhh
Q 002899 210 EGPIPASISALTSLTDLRISDLKGSESAFPKLDK-MNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTF 288 (869)
Q Consensus 210 ~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~-~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 288 (869)
+. +|..+. ++|+.|+|++|.++......+.. .+|+.|+|++|.|++..+..|..+++|+.|+|++|+|+ .+|..+
T Consensus 184 ~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l 259 (330)
T 1xku_A 184 TT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGL 259 (330)
T ss_dssp CS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTT
T ss_pred cc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhh
Confidence 85 444333 79999999999998876555544 48999999999999988889999999999999999999 788889
Q ss_pred hcCCCCCEEEeeCCcCCCCCchhh--------hccCCceeeeccCccC
Q 002899 289 EKLAKTNFMYLTGNKLTGPVPKYI--------FNSNKNVDISLNNFTW 328 (869)
Q Consensus 289 ~~l~~L~~L~Ls~N~l~~~~p~~~--------~~~l~~l~ls~N~~~~ 328 (869)
..+++|++|+|++|+|++..+..+ ...++.+++++|.+..
T Consensus 260 ~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~ 307 (330)
T 1xku_A 260 ADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQY 307 (330)
T ss_dssp TTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCG
T ss_pred ccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccc
Confidence 999999999999999997665554 2456789999997764
No 274
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.97 E-value=2.7e-30 Score=296.89 Aligned_cols=270 Identities=20% Similarity=0.208 Sum_probs=214.4
Q ss_pred EEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCC-CchhhcCcccccccccccc
Q 002899 58 TIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGP-FPKVLTNITTLKNLSIEGN 135 (869)
Q Consensus 58 ~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~Ls~N 135 (869)
.+++.+++++ .+|. +. ++|++|+|++|.|++..+..|..+ +|++|+|++|.+.+. .+..|.++++|++|+|++|
T Consensus 14 ~~~c~~~~l~-~lp~-l~--~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n 89 (455)
T 3v47_A 14 NAICINRGLH-QVPE-LP--AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYN 89 (455)
T ss_dssp EEECCSSCCS-SCCC-CC--TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTC
T ss_pred ccCcCCCCcc-cCCC-CC--CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCC
Confidence 5777888888 5665 33 789999999999999989999888 899999999999754 4678999999999999999
Q ss_pred ccCCCCCccccCCCCccEEEeecccccccCCcc--ccCCCCCCeEeccCCcCCCCCccc-cCCCCcccEEEccCCcCCCC
Q 002899 136 LFTGSIPPDIRKLINLQKLILSSNSFTGELPAE--LTKLTNLNDLRISDNNFSGKIPEF-IGKWKKIQKLHIQGSSLEGP 212 (869)
Q Consensus 136 ~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~--~~~l~~L~~L~Ls~N~l~~~~~~~-~~~l~~L~~L~L~~N~l~~~ 212 (869)
++++..|..|.++++|++|+|++|++++..+.. |..+++|++|+|++|++++..|.. |.++++|++|+|++|++++.
T Consensus 90 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~ 169 (455)
T 3v47_A 90 QFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSI 169 (455)
T ss_dssp TTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCC
T ss_pred ccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCccccc
Confidence 999888999999999999999999999755554 899999999999999999887876 89999999999999999988
Q ss_pred chHhhhcC----------------------------------CCCCEEEcCCCCCCCCccc-------------------
Q 002899 213 IPASISAL----------------------------------TSLTDLRISDLKGSESAFP------------------- 239 (869)
Q Consensus 213 ~~~~l~~l----------------------------------~~L~~L~L~~n~~~~~~~~------------------- 239 (869)
.+..+..+ ++|+.|+|++|.+......
T Consensus 170 ~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~ 249 (455)
T 3v47_A 170 CEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNS 249 (455)
T ss_dssp CTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTC
T ss_pred ChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccc
Confidence 77766554 5677778877766431110
Q ss_pred ---------------------ccccccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCCCchhhhcCCCCCEEE
Q 002899 240 ---------------------KLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMY 298 (869)
Q Consensus 240 ---------------------~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 298 (869)
.....+|+.|+|++|.+++..|..|..+++|+.|+|++|++++..|..|..+++|+.|+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 329 (455)
T 3v47_A 250 YNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLN 329 (455)
T ss_dssp TTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred cccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEE
Confidence 01113577777777777777777777777777777777777776677777777777777
Q ss_pred eeCCcCCCCCchhh--hccCCceeeeccCccCCCC
Q 002899 299 LTGNKLTGPVPKYI--FNSNKNVDISLNNFTWESS 331 (869)
Q Consensus 299 Ls~N~l~~~~p~~~--~~~l~~l~ls~N~~~~~~~ 331 (869)
|++|++++..|..+ +..++.|+|++|+++...+
T Consensus 330 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 364 (455)
T 3v47_A 330 LSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGD 364 (455)
T ss_dssp CCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECT
T ss_pred CCCCccCCcChhHhcCcccCCEEECCCCcccccCh
Confidence 77777766656555 4566777777777765543
No 275
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.97 E-value=4.7e-31 Score=310.16 Aligned_cols=201 Identities=28% Similarity=0.446 Sum_probs=172.1
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEeccc-CchhhHHHHHHHHHHHhcCCCceeeEEeEEee------Cce
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSK-SRQGNREFVNEIGMISAQQHPNLVKLYGCCVE------GNQ 708 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~-~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~------~~~ 708 (869)
.++|.+.+.||+|+||.||+|... +|+.||||++... .....+.+.+|++++++++||||+++++++.. .+.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 368999999999999999999974 6889999998764 33445678999999999999999999998765 667
Q ss_pred EEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCc---EEEee
Q 002899 709 LLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLN---AKISD 785 (869)
Q Consensus 709 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~---~kl~D 785 (869)
.++||||+++|+|.+++..... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++. +||+|
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~--~~~lse~~i~~I~~QLl~aL~yLHs~g---IVHrDLKP~NILl~~~g~~~~vKL~D 167 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFEN--CCGLKEGPIRTLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIID 167 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSC--TTCCCSSHHHHHHHHHHHHHHHHHHTT---BCCCCCCSTTEEEECCSSSCEEEECS
T ss_pred EEEEEEeCCCCCHHHHHHhccc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEeecCCCceeEEEcc
Confidence 8999999999999999976432 235889999999999999999999998 999999999999997665 99999
Q ss_pred cCCceeecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCC
Q 002899 786 FGLAKLYEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTN 844 (869)
Q Consensus 786 FGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~ 844 (869)
||++........ .....||+.|+|||++.+..++.++||||||+++|||++|+.||.
T Consensus 168 FG~a~~~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~ 224 (676)
T 3qa8_A 168 LGYAKELDQGEL--CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFL 224 (676)
T ss_dssp CCCCCBTTSCCC--CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCC
T ss_pred cccccccccccc--cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCC
Confidence 999987654322 234578999999999999999999999999999999999999985
No 276
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.96 E-value=1.6e-29 Score=271.87 Aligned_cols=172 Identities=10% Similarity=0.043 Sum_probs=150.4
Q ss_pred hcCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCc---hhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEE
Q 002899 637 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR---QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLV 712 (869)
Q Consensus 637 t~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~---~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 712 (869)
.++|++.+.||+|+||.||+|... +++.||||++..... ...+.|.+|++++.+++||||+++++++.+++..|+|
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 356888999999999999999976 489999999976532 2347789999999999999999999999999999999
Q ss_pred EEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceee
Q 002899 713 YEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 792 (869)
Q Consensus 713 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~ 792 (869)
|||+++++|.+++... ....++.+++.|++.||+|||+++ |+||||||+|||++.++.+||+++
T Consensus 110 ~e~~~g~~L~~~l~~~-------~~~~~~~~i~~ql~~aL~~lH~~g---ivH~Dikp~NIll~~~g~~kl~~~------ 173 (286)
T 3uqc_A 110 AEWIRGGSLQEVADTS-------PSPVGAIRAMQSLAAAADAAHRAG---VALSIDHPSRVRVSIDGDVVLAYP------ 173 (286)
T ss_dssp EECCCEEEHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEETTSCEEECSC------
T ss_pred EEecCCCCHHHHHhcC-------CChHHHHHHHHHHHHHHHHHHHCC---CccCCCCcccEEEcCCCCEEEEec------
Confidence 9999999999998432 245578899999999999999998 999999999999999999999844
Q ss_pred cCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 002899 793 EEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNYR 846 (869)
Q Consensus 793 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~~ 846 (869)
+|++| ++.++||||||+++|||++|+.||...
T Consensus 174 ---------------~~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~ 205 (286)
T 3uqc_A 174 ---------------ATMPD-------ANPQDDIRGIGASLYALLVNRWPLPEA 205 (286)
T ss_dssp ---------------CCCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCC
T ss_pred ---------------cccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcC
Confidence 33333 688999999999999999999999753
No 277
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.96 E-value=2.8e-29 Score=310.27 Aligned_cols=279 Identities=16% Similarity=0.160 Sum_probs=211.3
Q ss_pred cceEEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCC-Cchhhccc-cceEEEeecccCCCCCchhhcCccccccc
Q 002899 53 TCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGS-FSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNL 130 (869)
Q Consensus 53 ~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~-~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 130 (869)
..+++.|+|++|.|++..|..|.++++|++|+|++|.+.+. .+..|..+ +|++|+|++|.+++..|..|.++++|++|
T Consensus 23 p~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 102 (844)
T 3j0a_A 23 LNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFEL 102 (844)
T ss_dssp CTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCE
T ss_pred CCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEe
Confidence 45789999999999999999999999999999999965544 47888888 89999999999999999999999999999
Q ss_pred cccccccCCCCCcc--ccCCCCccEEEeecccccccCC-ccccCCCCCCeEeccCCcCCCCCccccCCC--CcccEEEcc
Q 002899 131 SIEGNLFTGSIPPD--IRKLINLQKLILSSNSFTGELP-AELTKLTNLNDLRISDNNFSGKIPEFIGKW--KKIQKLHIQ 205 (869)
Q Consensus 131 ~Ls~N~l~~~~~~~--~~~l~~L~~L~Ls~N~i~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l--~~L~~L~L~ 205 (869)
+|++|.+++.+|.. |.++++|++|+|++|.+++..+ ..|.++++|++|+|++|++++..+..|..+ ++|+.|+|+
T Consensus 103 ~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~ 182 (844)
T 3j0a_A 103 RLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLA 182 (844)
T ss_dssp ECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEEC
T ss_pred eCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECC
Confidence 99999999866665 9999999999999999997655 579999999999999999998888888776 777778887
Q ss_pred CCcCCCCchHhhhcCCC------CCEEEcCCCCCCCCcccc---------------------------------------
Q 002899 206 GSSLEGPIPASISALTS------LTDLRISDLKGSESAFPK--------------------------------------- 240 (869)
Q Consensus 206 ~N~l~~~~~~~l~~l~~------L~~L~L~~n~~~~~~~~~--------------------------------------- 240 (869)
.|.+.+..|..+..+++ |+.|+|++|.++......
T Consensus 183 ~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~ 262 (844)
T 3j0a_A 183 ANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAG 262 (844)
T ss_dssp CSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTT
T ss_pred CCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhc
Confidence 77777766665555544 677777766543221110
Q ss_pred cccccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCCCchhhhcCCCCCEEEeeCCcCCCCCchhh--hccCCc
Q 002899 241 LDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYI--FNSNKN 318 (869)
Q Consensus 241 ~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~--~~~l~~ 318 (869)
+...+|+.|+|++|.+.+..|..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..|..+ ...++.
T Consensus 263 l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 342 (844)
T 3j0a_A 263 LARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAY 342 (844)
T ss_dssp TTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCE
T ss_pred cccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCE
Confidence 001246666666666666666666666666666666666666666666666666666666666665555544 345566
Q ss_pred eeeeccCccCCCC
Q 002899 319 VDISLNNFTWESS 331 (869)
Q Consensus 319 l~ls~N~~~~~~~ 331 (869)
|++++|+++...+
T Consensus 343 L~L~~N~i~~~~~ 355 (844)
T 3j0a_A 343 IDLQKNHIAIIQD 355 (844)
T ss_dssp EECCSCCCCCCCS
T ss_pred EECCCCCCCccCh
Confidence 6666666655443
No 278
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.96 E-value=3.9e-29 Score=297.99 Aligned_cols=275 Identities=20% Similarity=0.204 Sum_probs=246.9
Q ss_pred eEEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhhcCcccccccccc
Q 002899 55 HVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIE 133 (869)
Q Consensus 55 ~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 133 (869)
.++.|++++|.+++..+..|.++++|++|+|++|.++.. |..+..+ +|++|+|++|++++..|..+..+++|++|+|+
T Consensus 255 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~l-p~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 333 (606)
T 3t6q_A 255 SVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLSEL-PSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIK 333 (606)
T ss_dssp EEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCSCC-CSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECC
T ss_pred ceeEEEeecCccCccCHHHhccccCCCEEeccCCccCCC-ChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECC
Confidence 799999999999988888899999999999999999955 4455655 89999999999999889999999999999999
Q ss_pred ccccCCCCCc-cccCCCCccEEEeecccccccC--CccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcCC
Q 002899 134 GNLFTGSIPP-DIRKLINLQKLILSSNSFTGEL--PAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLE 210 (869)
Q Consensus 134 ~N~l~~~~~~-~~~~l~~L~~L~Ls~N~i~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 210 (869)
+|.+.+.++. .+..+++|++|++++|++++.. +..+..+++|++|+|++|++++..|..|..+++|+.|+|++|++.
T Consensus 334 ~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 413 (606)
T 3t6q_A 334 GNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLK 413 (606)
T ss_dssp SCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEE
T ss_pred CCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCC
Confidence 9999877665 4899999999999999999766 778999999999999999999999999999999999999999999
Q ss_pred CCchH-hhhcCCCCCEEEcCCCCCCCCcccccc-cccceEEEcccccCccC---CCcccCCCCCcCEEeccCCCCCCCCc
Q 002899 211 GPIPA-SISALTSLTDLRISDLKGSESAFPKLD-KMNLKTLILTKCLIHGE---IPDYIGDMTKLKNIDLSFNNLTGGIP 285 (869)
Q Consensus 211 ~~~~~-~l~~l~~L~~L~L~~n~~~~~~~~~~~-~~~L~~L~Ls~N~i~~~---~p~~~~~l~~L~~L~Ls~N~l~~~~p 285 (869)
+..+. .+..+++|+.|+|++|.+.......+. ..+|++|+|++|++++. .+..+..+++|+.|+|++|++++..|
T Consensus 414 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 493 (606)
T 3t6q_A 414 VKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQ 493 (606)
T ss_dssp CCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECT
T ss_pred CcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccCh
Confidence 87654 599999999999999999887666554 34899999999999873 34678999999999999999999999
Q ss_pred hhhhcCCCCCEEEeeCCcCCCCCchhh--hccCCceeeeccCccCCCC
Q 002899 286 TTFEKLAKTNFMYLTGNKLTGPVPKYI--FNSNKNVDISLNNFTWESS 331 (869)
Q Consensus 286 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~--~~~l~~l~ls~N~~~~~~~ 331 (869)
..|..+++|+.|+|++|++++..|..+ ...+ .|++++|+++...+
T Consensus 494 ~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~ 540 (606)
T 3t6q_A 494 HAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILP 540 (606)
T ss_dssp TTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCG
T ss_pred hhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCH
Confidence 999999999999999999999888887 4567 89999999886543
No 279
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.96 E-value=1.7e-29 Score=277.83 Aligned_cols=264 Identities=22% Similarity=0.315 Sum_probs=227.4
Q ss_pred cceEEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhhcCcccccccc
Q 002899 53 TCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLS 131 (869)
Q Consensus 53 ~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 131 (869)
.|+++.+++++++++ .+|..+. ++|+.|+|++|.|++..+..|..+ +|++|+|++|++++..|..|.++++|++|+
T Consensus 32 ~c~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 108 (332)
T 2ft3_A 32 HCHLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLY 108 (332)
T ss_dssp EEETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEE
T ss_pred cccCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEE
Confidence 346788999999998 6777664 689999999999999888888887 899999999999998899999999999999
Q ss_pred ccccccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCC--CCCccccCCCCcccEEEccCCcC
Q 002899 132 IEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFS--GKIPEFIGKWKKIQKLHIQGSSL 209 (869)
Q Consensus 132 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~~~~~~~l~~L~~L~L~~N~l 209 (869)
|++|+++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.++ +..+..|..+ +|+.|++++|++
T Consensus 109 L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l 184 (332)
T 2ft3_A 109 ISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKL 184 (332)
T ss_dssp CCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBC
T ss_pred CCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCC
Confidence 9999999 5666555 79999999999999777777999999999999999996 4778888888 999999999999
Q ss_pred CCCchHhhhcCCCCCEEEcCCCCCCCCccccccc-ccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCCCchhh
Q 002899 210 EGPIPASISALTSLTDLRISDLKGSESAFPKLDK-MNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTF 288 (869)
Q Consensus 210 ~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~-~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 288 (869)
++ +|..+. ++|+.|+|++|.++......+.. .+|+.|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+
T Consensus 185 ~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l 260 (332)
T 2ft3_A 185 TG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGL 260 (332)
T ss_dssp SS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTG
T ss_pred Cc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhh
Confidence 96 444433 78999999999999877655543 48999999999999988889999999999999999999 788889
Q ss_pred hcCCCCCEEEeeCCcCCCCCchhh--------hccCCceeeeccCcc
Q 002899 289 EKLAKTNFMYLTGNKLTGPVPKYI--------FNSNKNVDISLNNFT 327 (869)
Q Consensus 289 ~~l~~L~~L~Ls~N~l~~~~p~~~--------~~~l~~l~ls~N~~~ 327 (869)
..+++|+.|+|++|+|++..+..+ ...++.+++++|.++
T Consensus 261 ~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~ 307 (332)
T 2ft3_A 261 PDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVP 307 (332)
T ss_dssp GGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSC
T ss_pred hcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCccc
Confidence 999999999999999997655544 234678999999655
No 280
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.96 E-value=5.3e-29 Score=303.70 Aligned_cols=268 Identities=18% Similarity=0.243 Sum_probs=191.0
Q ss_pred cceEEEEeccCCCccccCCccccCCCCCCEEEeecCc-CCC-CCchhhccc--------cceEEEeecccCCCCCch--h
Q 002899 53 TCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNC-LTG-SFSPQWASL--------QLVELSVMGNRLSGPFPK--V 120 (869)
Q Consensus 53 ~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~-i~~-~~~~~~~~l--------~L~~L~Ls~N~l~~~~~~--~ 120 (869)
..+++.|+|++|++.+.+|..|.++++|+.|+|++|+ +++ .+|..+..+ +|+.|+|++|+++ .+|. .
T Consensus 490 L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~ 568 (876)
T 4ecn_A 490 LKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASAS 568 (876)
T ss_dssp CTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHH
T ss_pred CCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhh
Confidence 3568999999999999999999999999999999998 888 677766554 6999999999999 7777 8
Q ss_pred hcCccccccccccccccCCCCCccccCCCCccEEEeecccccccCCccccCCCC-CCeEeccCCcCCCCCccccCCCCc-
Q 002899 121 LTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTN-LNDLRISDNNFSGKIPEFIGKWKK- 198 (869)
Q Consensus 121 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~~~~~~~l~~- 198 (869)
|.++++|+.|+|++|+++ .+| .|..+++|+.|+|++|+++ .+|..+.++++ |+.|+|++|+|+ .+|..+..++.
T Consensus 569 l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~ 644 (876)
T 4ecn_A 569 LQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVY 644 (876)
T ss_dssp HTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSS
T ss_pred hhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccC
Confidence 999999999999999999 777 8999999999999999999 88888988988 999999999988 66766655543
Q ss_pred -ccEEEccCCcCCCCch-----------------------------HhhhcCCCCCEEEcCCCCCCCCcccccccc----
Q 002899 199 -IQKLHIQGSSLEGPIP-----------------------------ASISALTSLTDLRISDLKGSESAFPKLDKM---- 244 (869)
Q Consensus 199 -L~~L~L~~N~l~~~~~-----------------------------~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~---- 244 (869)
|+.|+|++|++.+.+| ..+..+++|+.|+|++|.+...+...+...
T Consensus 645 ~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l 724 (876)
T 4ecn_A 645 VMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNY 724 (876)
T ss_dssp CEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSCC
T ss_pred CCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCCccChHHhccccccc
Confidence 6666666665554332 223345555555555555554443333322
Q ss_pred ----cceEEEcccccCccCCCcccC--CCCCcCEEeccCCCCCCCCchhhhcCCCCCEEEeeC------CcCCCCCchhh
Q 002899 245 ----NLKTLILTKCLIHGEIPDYIG--DMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTG------NKLTGPVPKYI 312 (869)
Q Consensus 245 ----~L~~L~Ls~N~i~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~------N~l~~~~p~~~ 312 (869)
+|+.|+|++|+|+ .+|..+. .+++|+.|+|++|+|++ +|..+..+++|+.|+|++ |++.+.+|..+
T Consensus 725 ~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l 802 (876)
T 4ecn_A 725 KNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGI 802 (876)
T ss_dssp TTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTG
T ss_pred cccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHH
Confidence 4555556555555 4444444 55556666666665554 455555555566665544 55555555555
Q ss_pred --hccCCceeeeccCcc
Q 002899 313 --FNSNKNVDISLNNFT 327 (869)
Q Consensus 313 --~~~l~~l~ls~N~~~ 327 (869)
+..|+.|+|++|++.
T Consensus 803 ~~L~~L~~L~Ls~N~L~ 819 (876)
T 4ecn_A 803 TTCPSLIQLQIGSNDIR 819 (876)
T ss_dssp GGCSSCCEEECCSSCCC
T ss_pred hcCCCCCEEECCCCCCC
Confidence 335555566655553
No 281
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.96 E-value=1.3e-29 Score=276.29 Aligned_cols=229 Identities=27% Similarity=0.421 Sum_probs=157.6
Q ss_pred CCCCEEEeecCcCCC--CCchhhccc-cceEEEeec-ccCCCCCchhhcCccccccccccccccCCCCCccccCCCCccE
Q 002899 78 RYLKQLDLSRNCLTG--SFSPQWASL-QLVELSVMG-NRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQK 153 (869)
Q Consensus 78 ~~L~~L~Ls~N~i~~--~~~~~~~~l-~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 153 (869)
.+++.|+|++|.+++ .+|..+..+ +|++|+|++ |.+.+.+|..|.++++|++|+|++|++++.+|..|..+++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 356677777776665 555555554 555566553 5555555555555555555555555555555555555555555
Q ss_pred EEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCC-cccEEEccCCcCCCCchHhhhcCCCCCEEEcCCCC
Q 002899 154 LILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWK-KIQKLHIQGSSLEGPIPASISALTSLTDLRISDLK 232 (869)
Q Consensus 154 L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~ 232 (869)
|+|++|++++.+|..+..+++|++|+|++|++++.+|..+..++ +|+.|+|++|++++.+|..+..+
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l------------ 197 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL------------ 197 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGC------------
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCC------------
Confidence 55555555555555555555555555555555555555555554 55555555555555555555444
Q ss_pred CCCCcccccccccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCCCchhhhcCCCCCEEEeeCCcCCCCCchhh
Q 002899 233 GSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYI 312 (869)
Q Consensus 233 ~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 312 (869)
+|+.|+|++|++++..|..|..+++|+.|+|++|++++.+|. +..+++|++|+|++|++++.+|..+
T Consensus 198 ------------~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l 264 (313)
T 1ogq_A 198 ------------NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGL 264 (313)
T ss_dssp ------------CCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGG
T ss_pred ------------cccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHH
Confidence 456666778888888999999999999999999999977666 8899999999999999999999988
Q ss_pred --hccCCceeeeccCccCCCC
Q 002899 313 --FNSNKNVDISLNNFTWESS 331 (869)
Q Consensus 313 --~~~l~~l~ls~N~~~~~~~ 331 (869)
+..++.|+|++|++++..+
T Consensus 265 ~~l~~L~~L~Ls~N~l~~~ip 285 (313)
T 1ogq_A 265 TQLKFLHSLNVSFNNLCGEIP 285 (313)
T ss_dssp GGCTTCCEEECCSSEEEEECC
T ss_pred hcCcCCCEEECcCCcccccCC
Confidence 5689999999999985543
No 282
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.96 E-value=1.6e-28 Score=269.85 Aligned_cols=266 Identities=20% Similarity=0.231 Sum_probs=228.4
Q ss_pred cceEEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhhcCcccccccc
Q 002899 53 TCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLS 131 (869)
Q Consensus 53 ~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 131 (869)
..+++.|+|++|++++..+..|.++++|++|+|++|.|++..|..|..+ +|++|+|++|+++.. |..+. ++|++|+
T Consensus 51 ~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~l-~~~~~--~~L~~L~ 127 (330)
T 1xku_A 51 PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKEL-PEKMP--KTLQELR 127 (330)
T ss_dssp CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSBC-CSSCC--TTCCEEE
T ss_pred CCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCCcc-Chhhc--ccccEEE
Confidence 4578999999999998888899999999999999999999999999888 899999999999954 44443 7999999
Q ss_pred ccccccCCCCCccccCCCCccEEEeecccccc--cCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcC
Q 002899 132 IEGNLFTGSIPPDIRKLINLQKLILSSNSFTG--ELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSL 209 (869)
Q Consensus 132 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 209 (869)
|++|.+++..+..|.++++|++|+|++|++.. ..+..+.++++|++|++++|+++. +|..+. ++|+.|+|++|.+
T Consensus 128 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l 204 (330)
T 1xku_A 128 VHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKI 204 (330)
T ss_dssp CCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCC
T ss_pred CCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcC
Confidence 99999998877789999999999999999964 678889999999999999999985 555443 8999999999999
Q ss_pred CCCchHhhhcCCCCCEEEcCCCCCCCCccccccc-ccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCCCchhh
Q 002899 210 EGPIPASISALTSLTDLRISDLKGSESAFPKLDK-MNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTF 288 (869)
Q Consensus 210 ~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~-~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 288 (869)
++..+..+..+++|+.|+|++|.++......+.. .+|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+..|
T Consensus 205 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f 283 (330)
T 1xku_A 205 TKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDF 283 (330)
T ss_dssp CEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSS
T ss_pred CccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhc
Confidence 9888999999999999999999999877654443 48999999999999 778889999999999999999998888777
Q ss_pred hcC------CCCCEEEeeCCcCCC--CCchhh--hccCCceeeeccC
Q 002899 289 EKL------AKTNFMYLTGNKLTG--PVPKYI--FNSNKNVDISLNN 325 (869)
Q Consensus 289 ~~l------~~L~~L~Ls~N~l~~--~~p~~~--~~~l~~l~ls~N~ 325 (869)
... +.|+.|+|++|++.. ..|..+ ...++.++|++|+
T Consensus 284 ~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 284 CPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp SCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred CCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 643 789999999999974 344444 3467788988883
No 283
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.96 E-value=1.7e-28 Score=296.60 Aligned_cols=279 Identities=19% Similarity=0.210 Sum_probs=224.7
Q ss_pred cceEEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhhcCcccccccc
Q 002899 53 TCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLS 131 (869)
Q Consensus 53 ~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 131 (869)
..+++.|+|++|++++..+..|.++++|++|+|++|.+++..|..|..+ +|++|+|++|+++++.+..|+++++|++|+
T Consensus 24 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 103 (680)
T 1ziw_A 24 PTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELH 103 (680)
T ss_dssp CTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEE
T ss_pred CCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEE
Confidence 4579999999999998877889999999999999999999999999888 899999999999988777899999999999
Q ss_pred ccccccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccC--CCCcccEEEccCCcC
Q 002899 132 IEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIG--KWKKIQKLHIQGSSL 209 (869)
Q Consensus 132 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~--~l~~L~~L~L~~N~l 209 (869)
|++|++++..|..|.++++|++|+|++|++++..|..+.++++|++|+|++|++++..+..+. .+++|+.|+|++|.+
T Consensus 104 L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l 183 (680)
T 1ziw_A 104 LMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQI 183 (680)
T ss_dssp CCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCC
T ss_pred CCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcc
Confidence 999999987778899999999999999999988888999999999999999999988877765 458999999999999
Q ss_pred CCCchHhhhcCC---------------------------CCCEEEcCCCCCCCCccccccc---ccceEEEcccccCccC
Q 002899 210 EGPIPASISALT---------------------------SLTDLRISDLKGSESAFPKLDK---MNLKTLILTKCLIHGE 259 (869)
Q Consensus 210 ~~~~~~~l~~l~---------------------------~L~~L~L~~n~~~~~~~~~~~~---~~L~~L~Ls~N~i~~~ 259 (869)
++..|..+..++ +|+.|++++|.+.......+.. .+|+.|+|++|++++.
T Consensus 184 ~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~ 263 (680)
T 1ziw_A 184 KEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVV 263 (680)
T ss_dssp CCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEE
T ss_pred cccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCcc
Confidence 988888777664 4555666666665544333332 2477777777777777
Q ss_pred CCcccCCCCCcCEEeccCCCCCCCCchhhhcCCCCCEEEeeCCcCCCC-----Cch----hh--hccCCceeeeccCccC
Q 002899 260 IPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGP-----VPK----YI--FNSNKNVDISLNNFTW 328 (869)
Q Consensus 260 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-----~p~----~~--~~~l~~l~ls~N~~~~ 328 (869)
.|..|+.+++|+.|+|++|++++..|..|.++++|+.|+|++|...+. +|. .+ ...++.|++++|+++.
T Consensus 264 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~ 343 (680)
T 1ziw_A 264 GNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPG 343 (680)
T ss_dssp CTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCC
T ss_pred CcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCC
Confidence 777777777777777777777777777777777777777776655432 221 12 3466777777777766
Q ss_pred CCC
Q 002899 329 ESS 331 (869)
Q Consensus 329 ~~~ 331 (869)
..+
T Consensus 344 ~~~ 346 (680)
T 1ziw_A 344 IKS 346 (680)
T ss_dssp CCT
T ss_pred CCh
Confidence 544
No 284
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.96 E-value=3.7e-29 Score=292.55 Aligned_cols=268 Identities=16% Similarity=0.179 Sum_probs=191.6
Q ss_pred ceEEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhhcCccccccccc
Q 002899 54 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSI 132 (869)
Q Consensus 54 ~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 132 (869)
.+++.|+|++|.+++..|..|.++++|++|+|++|+|++..|..|..+ +|++|+|++|+++. +|.. .+++|++|+|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~--~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVK-ISCH--PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCE-EECC--CCCCCSEEEC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCceee-cCcc--ccCCccEEec
Confidence 468888888888887777788888888888888888888888888877 78888888888884 4444 7888888888
Q ss_pred cccccCC-CCCccccCCCCccEEEeecccccccCCccccCCCCC--CeEeccCCcC--CCCCccccCCCC----------
Q 002899 133 EGNLFTG-SIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNL--NDLRISDNNF--SGKIPEFIGKWK---------- 197 (869)
Q Consensus 133 s~N~l~~-~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L--~~L~Ls~N~l--~~~~~~~~~~l~---------- 197 (869)
++|++++ .+|..|+++++|++|+|++|+|++ ..+..+++| ++|+|++|++ .+..|..|..+.
T Consensus 98 ~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~ 174 (520)
T 2z7x_B 98 SFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPT 174 (520)
T ss_dssp CSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCS
T ss_pred cCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEEEEecc
Confidence 8888886 367788888888888888888774 345555555 6666666666 444444444322
Q ss_pred -------------------------------------------------------------------------cccEEEc
Q 002899 198 -------------------------------------------------------------------------KIQKLHI 204 (869)
Q Consensus 198 -------------------------------------------------------------------------~L~~L~L 204 (869)
+|+.|++
T Consensus 175 n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l 254 (520)
T 2z7x_B 175 NKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSI 254 (520)
T ss_dssp SSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEE
T ss_pred CcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEe
Confidence 4555555
Q ss_pred cCCcCCCCchHhh-----hcCCC--------------------------CCEEEcCCCCCCCCcccccccccceEEEccc
Q 002899 205 QGSSLEGPIPASI-----SALTS--------------------------LTDLRISDLKGSESAFPKLDKMNLKTLILTK 253 (869)
Q Consensus 205 ~~N~l~~~~~~~l-----~~l~~--------------------------L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~ 253 (869)
++|++++.+|..+ ..+++ |+.|++++|.+...... ....+|++|+|++
T Consensus 255 ~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~l~~L~~L~Ls~ 333 (520)
T 2z7x_B 255 SNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCP-SKISPFLHLDFSN 333 (520)
T ss_dssp EEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCCCCCC-SSCCCCCEEECCS
T ss_pred ecccccCccccchhhcccccCceeEeccccccceecchhhhhcccccCceeEEEcCCCccccccch-hhCCcccEEEeEC
Confidence 5555555555444 33333 44444444444333221 2334788888888
Q ss_pred ccCccCCCcccCCCCCcCEEeccCCCCCC--CCchhhhcCCCCCEEEeeCCcCCCCCchhh---hccCCceeeeccCccC
Q 002899 254 CLIHGEIPDYIGDMTKLKNIDLSFNNLTG--GIPTTFEKLAKTNFMYLTGNKLTGPVPKYI---FNSNKNVDISLNNFTW 328 (869)
Q Consensus 254 N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~---~~~l~~l~ls~N~~~~ 328 (869)
|++++..|..+..+++|+.|+|++|++++ .+|..+..+++|+.|+|++|++++.+|... ...++.|++++|.++.
T Consensus 334 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~ 413 (520)
T 2z7x_B 334 NLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTD 413 (520)
T ss_dssp SCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCG
T ss_pred CccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCc
Confidence 88888888888888888888888888886 455778888888888888888887677653 3567888888887764
No 285
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.96 E-value=1.4e-28 Score=266.41 Aligned_cols=174 Identities=24% Similarity=0.338 Sum_probs=150.0
Q ss_pred cCCCCC-CeeeccCceEEEEEEEc-CCcEEEEEEecccCchhhHHHHHHHHHH-HhcCCCceeeEEeEEee----CceEE
Q 002899 638 NNFDPA-NKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMI-SAQQHPNLVKLYGCCVE----GNQLL 710 (869)
Q Consensus 638 ~~f~~~-~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~~~~~~f~~E~~~l-~~l~H~nIv~l~~~~~~----~~~~~ 710 (869)
++|.+. ++||+|+||.||+|... +++.||+|++.. ...+.+|++++ +..+||||+++++++.. ....+
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 91 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 91 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence 456666 77999999999999974 689999999864 24567888887 56799999999999887 67789
Q ss_pred EEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcC---CCcEEEeecC
Q 002899 711 LVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDK---DLNAKISDFG 787 (869)
Q Consensus 711 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~---~~~~kl~DFG 787 (869)
+||||+++|+|.+++..... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++. ++.+||+|||
T Consensus 92 lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~kl~Dfg 165 (299)
T 3m2w_A 92 IVMECLDGGELFSRIQDRGD---QAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFG 165 (299)
T ss_dssp EEECCCCSCBHHHHHHHCTT---CCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCT
T ss_pred EEEeecCCCcHHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEecCCCCCcEEEeccc
Confidence 99999999999999976432 26899999999999999999999998 999999999999998 7899999999
Q ss_pred CceeecCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 002899 788 LAKLYEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNY 845 (869)
Q Consensus 788 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~~~ 845 (869)
++..... ..++.++||||||+++|||++|+.||..
T Consensus 166 ~a~~~~~-----------------------~~~~~~~DiwslG~il~el~tg~~pf~~ 200 (299)
T 3m2w_A 166 FAKETTG-----------------------EKYDKSCDMWSLGVIMYILLCGYPPFYS 200 (299)
T ss_dssp TCEECTT-----------------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred ccccccc-----------------------ccCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 9865431 3357789999999999999999999954
No 286
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.96 E-value=2.3e-29 Score=285.17 Aligned_cols=199 Identities=15% Similarity=0.142 Sum_probs=152.2
Q ss_pred cCCCCCCeeeccCceEEEEEEEc-CCcEEEEEEecccCc---hhhHHHHHHHHHHHhcCC-Cce---------------e
Q 002899 638 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR---QGNREFVNEIGMISAQQH-PNL---------------V 697 (869)
Q Consensus 638 ~~f~~~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~---~~~~~f~~E~~~l~~l~H-~nI---------------v 697 (869)
.+|...++||+|+||.||+|... +|+.||||++..... ...+.|.+|+.++..++| +|. +
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 45667789999999999999964 689999999874322 235778999999999987 221 1
Q ss_pred e------EEeEEee-----CceEEEEEEeccCCchhhhhhcCC--cccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeE
Q 002899 698 K------LYGCCVE-----GNQLLLVYEYMKNNCLSRAIFGKD--TEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIV 764 (869)
Q Consensus 698 ~------l~~~~~~-----~~~~~lV~E~~~~gsL~~~l~~~~--~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ii 764 (869)
. +..++.. ....+++|++ .+++|.+++.... ......+++..+..++.||++||+|||+++ |+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPR-MQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---LV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEEC-CSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EE
T ss_pred ccCCCCccccccCCCccccccceEEEeeh-hcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC---cc
Confidence 1 1111111 1235677775 4689988874110 011235788999999999999999999998 99
Q ss_pred EcCCCCCCEEEcCCCcEEEeecCCceeecCCCccccccccccccccchhhc----------ccCCCCchhHHHHHHHHHH
Q 002899 765 HRDIKTSNVLLDKDLNAKISDFGLAKLYEEDKTHISTRIAGTIGYMAPEYA----------MRGYLTSKADVYSFGVVTL 834 (869)
Q Consensus 765 H~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~k~DvwSlGvil~ 834 (869)
||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ ....++.++|||||||++|
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ 308 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIY 308 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHH
Confidence 9999999999999999999999998865432 233567 999999999 5556888999999999999
Q ss_pred HHHcCCCCCCC
Q 002899 835 EIVSGKSNTNY 845 (869)
Q Consensus 835 elltG~~p~~~ 845 (869)
||++|+.||..
T Consensus 309 elltg~~Pf~~ 319 (413)
T 3dzo_A 309 WIWCADLPNTD 319 (413)
T ss_dssp HHHHSSCCCCT
T ss_pred HHHHCCCCCCC
Confidence 99999999965
No 287
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.96 E-value=2.8e-28 Score=274.40 Aligned_cols=250 Identities=16% Similarity=0.110 Sum_probs=180.1
Q ss_pred cCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhhcCccccccccccccccCCCCCccccCCCCccE
Q 002899 75 SKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQK 153 (869)
Q Consensus 75 ~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 153 (869)
..+++|+.|++++|.++.+++..|..+ +|++|+|++|.+++..+..|..+++|++|+|++|.+++..|..|..+++|++
T Consensus 42 ~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 121 (390)
T 3o6n_A 42 ITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTV 121 (390)
T ss_dssp GGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred cccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCE
Confidence 346899999999999999988888887 8999999999999888889999999999999999999888888999999999
Q ss_pred EEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcCCCCchHhhhcCCCCCEEEcCCCC-
Q 002899 154 LILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLK- 232 (869)
Q Consensus 154 L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~- 232 (869)
|+|++|+++...+..|.++++|++|+|++|++++..+..|..+++|+.|+|++|++++.... .+++|+.|++++|.
T Consensus 122 L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~---~l~~L~~L~l~~n~l 198 (390)
T 3o6n_A 122 LVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLS---LIPSLFHANVSYNLL 198 (390)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGG---GCTTCSEEECCSSCC
T ss_pred EECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccccc---cccccceeecccccc
Confidence 99999999955555579999999999999999988899999999999999999999976433 33444443333333
Q ss_pred ------------------CCCCccc--------------------ccccccceEEEcccccCccCCCcccCCCCCcCEEe
Q 002899 233 ------------------GSESAFP--------------------KLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNID 274 (869)
Q Consensus 233 ------------------~~~~~~~--------------------~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~ 274 (869)
+...+.. .....+|+.|+|++|.+++..|..|..+++|+.|+
T Consensus 199 ~~~~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~n~l~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 278 (390)
T 3o6n_A 199 STLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDTAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLY 278 (390)
T ss_dssp SEEECCSSCSEEECCSSCCCEEECCCCSSCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEE
T ss_pred cccCCCCcceEEECCCCeeeeccccccccccEEECCCCCCcccHHHcCCCCccEEECCCCcCCCcChhHccccccCCEEE
Confidence 3222111 11112455555555555555555555555555555
Q ss_pred ccCCCCCCCCchhhhcCCCCCEEEeeCCcCCCCCchhh--hccCCceeeeccCccCC
Q 002899 275 LSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYI--FNSNKNVDISLNNFTWE 329 (869)
Q Consensus 275 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~--~~~l~~l~ls~N~~~~~ 329 (869)
|++|++++ +|..+..+++|+.|+|++|+++ .+|..+ +..++.|++++|+++..
T Consensus 279 L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~ 333 (390)
T 3o6n_A 279 ISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL 333 (390)
T ss_dssp CCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC
T ss_pred CCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCcccee
Confidence 55555552 3444445555555555555555 233333 34555555555555443
No 288
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.96 E-value=2e-28 Score=269.33 Aligned_cols=264 Identities=20% Similarity=0.232 Sum_probs=228.8
Q ss_pred cceEEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhhcCcccccccc
Q 002899 53 TCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLS 131 (869)
Q Consensus 53 ~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 131 (869)
..+++.|++++|++++..|..|.++++|++|+|++|.|++..+..|..+ +|++|+|++|+++.. |..+. ++|++|+
T Consensus 53 ~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l-~~~~~--~~L~~L~ 129 (332)
T 2ft3_A 53 SPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEI-PPNLP--SSLVELR 129 (332)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCCSC-CSSCC--TTCCEEE
T ss_pred CCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCCcc-Ccccc--ccCCEEE
Confidence 3578999999999998888899999999999999999999999999888 899999999999954 44443 8999999
Q ss_pred ccccccCCCCCccccCCCCccEEEeecccccc--cCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcC
Q 002899 132 IEGNLFTGSIPPDIRKLINLQKLILSSNSFTG--ELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSL 209 (869)
Q Consensus 132 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 209 (869)
|++|++++..+..|..+++|++|++++|.++. ..+..+..+ +|++|++++|++++ +|..+. ++|+.|+|++|.+
T Consensus 130 l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i 205 (332)
T 2ft3_A 130 IHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKI 205 (332)
T ss_dssp CCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCC
T ss_pred CCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcC
Confidence 99999997777789999999999999999963 677888888 99999999999996 555443 7999999999999
Q ss_pred CCCchHhhhcCCCCCEEEcCCCCCCCCccccccc-ccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCCCchhh
Q 002899 210 EGPIPASISALTSLTDLRISDLKGSESAFPKLDK-MNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTF 288 (869)
Q Consensus 210 ~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~-~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 288 (869)
++..+..+..+++|+.|+|++|.+.......+.. .+|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+..|
T Consensus 206 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~ 284 (332)
T 2ft3_A 206 QAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDF 284 (332)
T ss_dssp CCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSS
T ss_pred CccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHc
Confidence 9988899999999999999999999887655544 48999999999999 678889999999999999999998888877
Q ss_pred hcC------CCCCEEEeeCCcCC--CCCchhh--hccCCceeeecc
Q 002899 289 EKL------AKTNFMYLTGNKLT--GPVPKYI--FNSNKNVDISLN 324 (869)
Q Consensus 289 ~~l------~~L~~L~Ls~N~l~--~~~p~~~--~~~l~~l~ls~N 324 (869)
..+ ++|+.|++++|++. +..|..+ ...++.+++++|
T Consensus 285 ~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n 330 (332)
T 2ft3_A 285 CPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNY 330 (332)
T ss_dssp SCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC---
T ss_pred cccccccccccccceEeecCcccccccCcccccccchhhhhhcccc
Confidence 764 67999999999998 5555555 457888999888
No 289
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.96 E-value=1.4e-28 Score=293.23 Aligned_cols=162 Identities=16% Similarity=0.147 Sum_probs=135.2
Q ss_pred cCCCCCCeEeccCCcCCCCCc-cccCCCCcccEEEccCCcCCCCchHhhhcCCCCCEEEcCCCCCCCC-ccccc-ccccc
Q 002899 170 TKLTNLNDLRISDNNFSGKIP-EFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSES-AFPKL-DKMNL 246 (869)
Q Consensus 170 ~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~-~~~~~-~~~~L 246 (869)
..+++|+.|++++|++++..+ ..|..+++|+.|++++|.+.+..|..+..+++|+.|+|++|.+... ....+ ...+|
T Consensus 396 ~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L 475 (606)
T 3vq2_A 396 MGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNL 475 (606)
T ss_dssp TTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTC
T ss_pred cCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCC
Confidence 344455555555555555555 5678889999999999999999999999999999999999998873 33333 34589
Q ss_pred eEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCCCchhhhcCCCCCEEEeeCCcCCCCCchhhh---ccCCceeeec
Q 002899 247 KTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIF---NSNKNVDISL 323 (869)
Q Consensus 247 ~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~---~~l~~l~ls~ 323 (869)
+.|+|++|++++..|..|..+++|+.|+|++|++++.+|..|..+++|+.|+|++|+|+ .+|..+. ..++.+++++
T Consensus 476 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~ 554 (606)
T 3vq2_A 476 TFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTN 554 (606)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCS
T ss_pred CEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccC
Confidence 99999999999999999999999999999999999999999999999999999999999 6776663 2589999999
Q ss_pred cCccCCCCC
Q 002899 324 NNFTWESSD 332 (869)
Q Consensus 324 N~~~~~~~~ 332 (869)
|++....+.
T Consensus 555 N~~~c~c~~ 563 (606)
T 3vq2_A 555 NSVACICEH 563 (606)
T ss_dssp CCCCCSSTT
T ss_pred CCcccCCcc
Confidence 999865554
No 290
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.96 E-value=1.9e-28 Score=289.28 Aligned_cols=263 Identities=20% Similarity=0.175 Sum_probs=197.8
Q ss_pred EEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhhcCcccccccccccc
Q 002899 57 VTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGN 135 (869)
Q Consensus 57 ~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 135 (869)
+.++++++++++ +|..+. ++|++|+|++|.|++.++..|..+ +|++|+|++|++++..|+.|.++++|++|+|++|
T Consensus 34 ~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 110 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHN 110 (562)
T ss_dssp CEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCC
Confidence 789999999995 777665 899999999999999999999988 8999999999999999999999999999999999
Q ss_pred ccCCCCCccccCCCCccEEEeecccccc-cCCccccCCCCCCeEeccCCcCCCCCccccCCCCcc--cEEEccCCcC--C
Q 002899 136 LFTGSIPPDIRKLINLQKLILSSNSFTG-ELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKI--QKLHIQGSSL--E 210 (869)
Q Consensus 136 ~l~~~~~~~~~~l~~L~~L~Ls~N~i~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L--~~L~L~~N~l--~ 210 (869)
+|+ .+|.. .+++|++|+|++|++++ ..|..|.++++|++|+|++|++++.. +..+++| +.|+|++|.+ +
T Consensus 111 ~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~~---~~~l~~L~L~~L~L~~n~l~~~ 184 (562)
T 3a79_B 111 RLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQLD---LLPVAHLHLSCILLDLVSYHIK 184 (562)
T ss_dssp CCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTTT---TGGGTTSCEEEEEEEESSCCCC
T ss_pred cCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccCc---hhhhhhceeeEEEeeccccccc
Confidence 999 56655 89999999999999997 34689999999999999999987532 3333444 7777777666 4
Q ss_pred CCchHhhhcCC---------------------------------------------------------------------
Q 002899 211 GPIPASISALT--------------------------------------------------------------------- 221 (869)
Q Consensus 211 ~~~~~~l~~l~--------------------------------------------------------------------- 221 (869)
+..|..+..+.
T Consensus 185 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~ 264 (562)
T 3a79_B 185 GGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWK 264 (562)
T ss_dssp SSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHH
T ss_pred ccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHH
Confidence 44333333322
Q ss_pred ------------CCCEEEcCCCCCCC-Ccccc------------------------------------------------
Q 002899 222 ------------SLTDLRISDLKGSE-SAFPK------------------------------------------------ 240 (869)
Q Consensus 222 ------------~L~~L~L~~n~~~~-~~~~~------------------------------------------------ 240 (869)
+|++|++++|.+.. .+...
T Consensus 265 ~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~ 344 (562)
T 3a79_B 265 CSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFI 344 (562)
T ss_dssp HHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCC
T ss_pred HHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcc
Confidence 34444444444331 11100
Q ss_pred -----cccccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCCC--chhhhcCCCCCEEEeeCCcCCCCCchhh-
Q 002899 241 -----LDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGI--PTTFEKLAKTNFMYLTGNKLTGPVPKYI- 312 (869)
Q Consensus 241 -----~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~~~- 312 (869)
....+|+.|+|++|++++..|..+..+++|+.|+|++|++++.. |..+..+++|+.|+|++|++++.+|...
T Consensus 345 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~ 424 (562)
T 3a79_B 345 HMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTC 424 (562)
T ss_dssp CCCCCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCC
T ss_pred cccCccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhh
Confidence 12236778888888888777777778888888888888887533 4557777888888888888877566553
Q ss_pred --hccCCceeeeccCccC
Q 002899 313 --FNSNKNVDISLNNFTW 328 (869)
Q Consensus 313 --~~~l~~l~ls~N~~~~ 328 (869)
...++.|++++|.++.
T Consensus 425 ~~l~~L~~L~l~~n~l~~ 442 (562)
T 3a79_B 425 AWAESILVLNLSSNMLTG 442 (562)
T ss_dssp CCCTTCCEEECCSSCCCG
T ss_pred cCcccCCEEECCCCCCCc
Confidence 3456677777777654
No 291
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=8.4e-28 Score=285.67 Aligned_cols=244 Identities=18% Similarity=0.193 Sum_probs=174.6
Q ss_pred CCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhhcCccccccccccccccCCCCCccccCCCCccEE
Q 002899 76 KLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKL 154 (869)
Q Consensus 76 ~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 154 (869)
.+++++.|++++|.++.+++..|..+ +|+.|+|++|.+++..+..|..+++|++|+|++|.|++..|..|+++++|++|
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 46789999999999999999888887 89999999999999999999999999999999999999888889999999999
Q ss_pred EeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcCCCCchHhhhcCCCCCEEEcCCCCCC
Q 002899 155 ILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGS 234 (869)
Q Consensus 155 ~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~~~ 234 (869)
+|++|.|++..+..|.++++|++|+|++|.+++..|..|..+++|+.|+|++|.+++..+. .+++|+.|++++|.++
T Consensus 129 ~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~---~l~~L~~L~l~~n~l~ 205 (597)
T 3oja_B 129 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLS---LIPSLFHANVSYNLLS 205 (597)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGG---GCTTCSEEECCSSCCS
T ss_pred EeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChh---hhhhhhhhhcccCccc
Confidence 9999999966666689999999999999999999999999999999999999999976433 3444444444443333
Q ss_pred C-------------------CcccccccccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCCCchhhhcCCCCC
Q 002899 235 E-------------------SAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTN 295 (869)
Q Consensus 235 ~-------------------~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 295 (869)
. .+... ..+|+.|+|++|.+++ +..+..+++|+.|+|++|.|++.+|..|..+++|+
T Consensus 206 ~l~~~~~L~~L~ls~n~l~~~~~~~--~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 281 (597)
T 3oja_B 206 TLAIPIAVEELDASHNSINVVRGPV--NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLE 281 (597)
T ss_dssp EEECCTTCSEEECCSSCCCEEECSC--CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCC
T ss_pred cccCCchhheeeccCCccccccccc--CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCC
Confidence 2 21111 1134444444444443 23344445555555555555444444444444555
Q ss_pred EEEeeCCcCCCCCchhh--hccCCceeeeccCcc
Q 002899 296 FMYLTGNKLTGPVPKYI--FNSNKNVDISLNNFT 327 (869)
Q Consensus 296 ~L~Ls~N~l~~~~p~~~--~~~l~~l~ls~N~~~ 327 (869)
.|+|++|++++ +|..+ ++.|+.|+|++|.++
T Consensus 282 ~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~ 314 (597)
T 3oja_B 282 RLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL 314 (597)
T ss_dssp EEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC
T ss_pred EEECCCCCCCC-CCcccccCCCCcEEECCCCCCC
Confidence 55555554443 22222 234444444444444
No 292
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.95 E-value=5.7e-28 Score=257.57 Aligned_cols=225 Identities=22% Similarity=0.339 Sum_probs=151.0
Q ss_pred ceEecCCCCcceEEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccccceEEEeecccCCCCCchhhcC
Q 002899 44 NVTCDCSSATCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTN 123 (869)
Q Consensus 44 ~v~C~~~~~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l~L~~L~Ls~N~l~~~~~~~~~~ 123 (869)
++.|+|.. .++.+++++++++ .+|..+. ++|++|+|++|+|++.. +..|.+
T Consensus 9 ~~~C~c~~---~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~-----------------------~~~~~~ 59 (270)
T 2o6q_A 9 GGVCSCNN---NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLP-----------------------SKAFHR 59 (270)
T ss_dssp TCSBEEET---TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCC-----------------------TTSSSS
T ss_pred CCCCEeCC---CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeC-----------------------HHHhcC
Confidence 36787753 2457888888888 4666554 46777777766665443 344555
Q ss_pred ccccccccccccccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEE
Q 002899 124 ITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLH 203 (869)
Q Consensus 124 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 203 (869)
+++|++|+|++|.++...+..|..+++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|+.|+
T Consensus 60 l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 139 (270)
T 2o6q_A 60 LTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLS 139 (270)
T ss_dssp CTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEE
Confidence 66666666666666644444455666666666666666655455556666666666666666666666666666666666
Q ss_pred ccCCcCCCCchHhhhcCCCCCEEEcCCCCCCCCcccccccccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCC
Q 002899 204 IQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGG 283 (869)
Q Consensus 204 L~~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 283 (869)
|++|.+++..+..|..+++|+.|+|+ +|+|++..+..|..+++|+.|+|++|+|++.
T Consensus 140 Ls~n~l~~~~~~~~~~l~~L~~L~L~-----------------------~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 196 (270)
T 2o6q_A 140 LGYNELQSLPKGVFDKLTSLKELRLY-----------------------NNQLKRVPEGAFDKLTELKTLKLDNNQLKRV 196 (270)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECC-----------------------SSCCSCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCCcCCccCHhHccCCcccceeEec-----------------------CCcCcEeChhHhccCCCcCEEECCCCcCCcC
Confidence 66666665555555666655555444 4455555566677888888888888888877
Q ss_pred CchhhhcCCCCCEEEeeCCcCCCCCchhhhccCCceeeeccCccCCCCCCCCCCCC-CccceeccCCC
Q 002899 284 IPTTFEKLAKTNFMYLTGNKLTGPVPKYIFNSNKNVDISLNNFTWESSDPIECPRG-SVNLVESYSSP 350 (869)
Q Consensus 284 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~l~ls~N~~~~~~~~p~~C~c~-~~~~~~~l~~~ 350 (869)
.+..|..+++|+.|+|++| ||.|+|. +.++..|+...
T Consensus 197 ~~~~~~~l~~L~~L~l~~N------------------------------~~~c~c~~~~~~~~~l~~~ 234 (270)
T 2o6q_A 197 PEGAFDSLEKLKMLQLQEN------------------------------PWDCTCNGIIYMAKWLKKK 234 (270)
T ss_dssp CTTTTTTCTTCCEEECCSS------------------------------CBCCSSSSSHHHHHHHHHH
T ss_pred CHHHhccccCCCEEEecCC------------------------------CeeCCCccHHHHHHHHHhh
Confidence 7777888888888888888 8889997 67888888653
No 293
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.95 E-value=4.8e-28 Score=260.76 Aligned_cols=220 Identities=21% Similarity=0.182 Sum_probs=154.2
Q ss_pred cccCCCCCCEEEeecCcCCCCCchhhccccceEEEeecccCCCCCchhhcCccccccccccccccCCCCCccccCCCCcc
Q 002899 73 ELSKLRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQ 152 (869)
Q Consensus 73 ~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 152 (869)
.+.++++|++|++++|.++.+++... .+++.|+|++|++++..+..|..+++|++|+|++|.|++..+ ...+++|+
T Consensus 5 ~~~~l~~l~~l~~~~~~l~~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~ 80 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLTALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPVLG 80 (290)
T ss_dssp EEECSTTCCEEECTTSCCSSCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTTCC
T ss_pred cccccCCccEEECCCCCCCcCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC--CCCCCcCC
Confidence 36677778888888888776554332 367777777777777777778888888888888888774433 26677777
Q ss_pred EEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcCCCCchHhhhcCCCCCEEEcCCCC
Q 002899 153 KLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLK 232 (869)
Q Consensus 153 ~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~ 232 (869)
+|+|++|+|+ .+|..+..+++|++|+|++|+|++..+..|.++++|+.|+|++|+|++..+..|..+++|+.|+|+
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~--- 156 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLA--- 156 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT---
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECC---
Confidence 8888777777 566667777777777777777776666677777777777777777776555555555555554444
Q ss_pred CCCCcccccccccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCCCchhhhcCCCCCEEEeeCCcCCCCCchhh
Q 002899 233 GSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYI 312 (869)
Q Consensus 233 ~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 312 (869)
+|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|
T Consensus 157 --------------------~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~N---------- 205 (290)
T 1p9a_G 157 --------------------NNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGN---------- 205 (290)
T ss_dssp --------------------TSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSC----------
T ss_pred --------------------CCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCC----------
Confidence 44454445555666777777777777777 55655666666666666666
Q ss_pred hccCCceeeeccCccCCCCCCCCCCCCCccceeccCCCC
Q 002899 313 FNSNKNVDISLNNFTWESSDPIECPRGSVNLVESYSSPR 351 (869)
Q Consensus 313 ~~~l~~l~ls~N~~~~~~~~p~~C~c~~~~~~~~l~~~~ 351 (869)
||.|+|.+.++..|++...
T Consensus 206 --------------------p~~C~c~~~~l~~wl~~~~ 224 (290)
T 1p9a_G 206 --------------------PWLCNCEILYFRRWLQDNA 224 (290)
T ss_dssp --------------------CBCCSGGGHHHHHHHHHTG
T ss_pred --------------------CccCcCccHHHHHHHHhCc
Confidence 9999999999999987643
No 294
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.95 E-value=2.4e-27 Score=278.99 Aligned_cols=117 Identities=25% Similarity=0.288 Sum_probs=88.8
Q ss_pred cceEEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCC-CchhhcCccccccc
Q 002899 53 TCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGP-FPKVLTNITTLKNL 130 (869)
Q Consensus 53 ~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L 130 (869)
..+++.|+|++|.+++..|.+|.++++|++|+|++|.+++.++..|..+ +|++|+|++|++++. .|..+.++++|++|
T Consensus 49 l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L 128 (549)
T 2z81_A 49 CANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTL 128 (549)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEE
T ss_pred CCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEE
Confidence 3568899999999998888889999999999999999998888878777 799999999988863 45667778888888
Q ss_pred cccccccCCCCC-ccccCCCCccEEEeecccccccCCccc
Q 002899 131 SIEGNLFTGSIP-PDIRKLINLQKLILSSNSFTGELPAEL 169 (869)
Q Consensus 131 ~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~i~~~~p~~~ 169 (869)
+|++|.+.+.+| ..|.++++|++|+|++|++++..|..+
T Consensus 129 ~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l 168 (549)
T 2z81_A 129 RIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSL 168 (549)
T ss_dssp EEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTT
T ss_pred ECCCCccccccCHhhhhcccccCeeeccCCcccccChhhh
Confidence 888777333333 456666666666666666665444433
No 295
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.95 E-value=4.5e-27 Score=259.97 Aligned_cols=260 Identities=21% Similarity=0.286 Sum_probs=208.1
Q ss_pred cceEEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhhcCcccccccc
Q 002899 53 TCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLS 131 (869)
Q Consensus 53 ~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 131 (869)
..+++.|++++|.+++. +. +..+++|++|+|++|.++.. + .+..+ +|++|+|++|.+++..+ +..+++|++|+
T Consensus 65 ~~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~L~~n~i~~~-~-~~~~l~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~ 138 (347)
T 4fmz_A 65 LTNLEYLNLNGNQITDI-SP-LSNLVKLTNLYIGTNKITDI-S-ALQNLTNLRELYLNEDNISDISP--LANLTKMYSLN 138 (347)
T ss_dssp CTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCC-G-GGTTCTTCSEEECTTSCCCCCGG--GTTCTTCCEEE
T ss_pred cCCccEEEccCCccccc-hh-hhcCCcCCEEEccCCcccCc-h-HHcCCCcCCEEECcCCcccCchh--hccCCceeEEE
Confidence 34689999999999854 44 99999999999999999875 3 46665 89999999999986544 88999999999
Q ss_pred ccccccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcCCC
Q 002899 132 IEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEG 211 (869)
Q Consensus 132 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 211 (869)
|++|.....+ ..+..+++|++|++++|.+.+..+ +..+++|++|++++|++++..+ +..+++|+.|++++|.+.+
T Consensus 139 l~~n~~~~~~-~~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~ 213 (347)
T 4fmz_A 139 LGANHNLSDL-SPLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITD 213 (347)
T ss_dssp CTTCTTCCCC-GGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC
T ss_pred CCCCCCcccc-cchhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCC
Confidence 9999666444 458899999999999999885443 7888999999999999885444 7888888888888888886
Q ss_pred CchHhhhcCCCCCEEEcCCCCCCCCcccccccccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCCCchhhhcC
Q 002899 212 PIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKL 291 (869)
Q Consensus 212 ~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 291 (869)
..+ +..+++|+.|+|++|.++..+. .....+|++|+|++|.+++. ..+..+++|+.|+|++|++++. ..+..+
T Consensus 214 ~~~--~~~~~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l 286 (347)
T 4fmz_A 214 ITP--VANMTRLNSLKIGNNKITDLSP-LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNL 286 (347)
T ss_dssp CGG--GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGC
T ss_pred Cch--hhcCCcCCEEEccCCccCCCcc-hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCC
Confidence 555 7888888888888888877654 33344788888888888764 4577888888888888888854 457888
Q ss_pred CCCCEEEeeCCcCCCCCchhh--hccCCceeeeccCccCCC
Q 002899 292 AKTNFMYLTGNKLTGPVPKYI--FNSNKNVDISLNNFTWES 330 (869)
Q Consensus 292 ~~L~~L~Ls~N~l~~~~p~~~--~~~l~~l~ls~N~~~~~~ 330 (869)
++|+.|+|++|++++..|..+ ++.++.|++++|+++...
T Consensus 287 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~ 327 (347)
T 4fmz_A 287 SQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIR 327 (347)
T ss_dssp TTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCG
T ss_pred CCCCEEECcCCcCCCcChhHhhccccCCEEEccCCcccccc
Confidence 888888888888887777766 457888888888777653
No 296
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=6.9e-29 Score=270.52 Aligned_cols=240 Identities=20% Similarity=0.260 Sum_probs=115.5
Q ss_pred EEEEeccCCCccccCCccccCCCCCCEEEeecCcCC-CCCchhhc--------cccceEEEeecccCCCCCchhh--cCc
Q 002899 56 VVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLT-GSFSPQWA--------SLQLVELSVMGNRLSGPFPKVL--TNI 124 (869)
Q Consensus 56 v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~-~~~~~~~~--------~l~L~~L~Ls~N~l~~~~~~~~--~~l 124 (869)
++.|++++|.+ .+|..+... |+.|+|++|.++ ...+..+. ..+|++|+|++|++++..|..+ ..+
T Consensus 45 L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l 120 (312)
T 1wwl_A 45 LEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATG 120 (312)
T ss_dssp CTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCS
T ss_pred ceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcC
Confidence 34445555555 444444433 555555555552 22232222 1245555555555555555443 555
Q ss_pred cccccccccccccCCCCCccccCC-----CCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCC--Ccccc--CC
Q 002899 125 TTLKNLSIEGNLFTGSIPPDIRKL-----INLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGK--IPEFI--GK 195 (869)
Q Consensus 125 ~~L~~L~Ls~N~l~~~~~~~~~~l-----~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~~~~~--~~ 195 (869)
++|++|+|++|++++. |..+..+ ++|++|+|++|+|++..|..|.++++|++|+|++|++.+. .+..+ ..
T Consensus 121 ~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 199 (312)
T 1wwl_A 121 PDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLK 199 (312)
T ss_dssp CCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTS
T ss_pred CCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhcc
Confidence 5555555555555544 4444444 5555555555555544445555555555555555554432 12222 45
Q ss_pred CCcccEEEccCCcCCC---CchHhhhcCCCCCEEEcCCCCCCCCc-ccccc-cccceEEEcccccCccCCCcccCCCCCc
Q 002899 196 WKKIQKLHIQGSSLEG---PIPASISALTSLTDLRISDLKGSESA-FPKLD-KMNLKTLILTKCLIHGEIPDYIGDMTKL 270 (869)
Q Consensus 196 l~~L~~L~L~~N~l~~---~~~~~l~~l~~L~~L~L~~n~~~~~~-~~~~~-~~~L~~L~Ls~N~i~~~~p~~~~~l~~L 270 (869)
+++|++|+|++|++++ .....+.++++|+.|+|++|.++... ...+. ..+|+.|+|++|+|+ .+|..+. ++|
T Consensus 200 l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L 276 (312)
T 1wwl_A 200 FPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKL 276 (312)
T ss_dssp CTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEE
T ss_pred CCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCc
Confidence 5555555555555552 11123344555555555555554433 12111 224555555555555 3333333 455
Q ss_pred CEEeccCCCCCCCCchhhhcCCCCCEEEeeCCcCC
Q 002899 271 KNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLT 305 (869)
Q Consensus 271 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 305 (869)
+.|+|++|+|++. |. +..+++|+.|+|++|+++
T Consensus 277 ~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~ 309 (312)
T 1wwl_A 277 SVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFL 309 (312)
T ss_dssp EEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTT
T ss_pred eEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCC
Confidence 5555555555533 33 455555555555555554
No 297
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.95 E-value=1.2e-27 Score=255.95 Aligned_cols=254 Identities=20% Similarity=0.257 Sum_probs=184.0
Q ss_pred EEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhhcCccccccccccccc
Q 002899 58 TIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNL 136 (869)
Q Consensus 58 ~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 136 (869)
.+++.+.+++ .+|..+. ++|++|+|++|.|++..+..|..+ +|++|+|++|++++..+..|.++++|++|+|++|.
T Consensus 11 ~~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 87 (276)
T 2z62_A 11 TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87 (276)
T ss_dssp EEECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred eEEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCc
Confidence 3455666666 5666554 578999999998887777667666 78888888888777777777777888888888887
Q ss_pred cCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCC-CccccCCCCcccEEEccCCcCCCCchH
Q 002899 137 FTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGK-IPEFIGKWKKIQKLHIQGSSLEGPIPA 215 (869)
Q Consensus 137 l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~ 215 (869)
+++..+..|.++++|++|++++|++++..+..+..+++|++|+|++|++++. +|..|..+++|+.|+|++|++++..+.
T Consensus 88 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~ 167 (276)
T 2z62_A 88 IQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 167 (276)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGG
T ss_pred cCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHH
Confidence 7766667777777788888887777766665677777777777777777753 477777777777777777777766666
Q ss_pred hhhcCCCCCEEEcCCCCCCCCcccccccccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCCCchhhhcCCCCC
Q 002899 216 SISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTN 295 (869)
Q Consensus 216 ~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 295 (869)
.+..+++|+.|.+ .|++++|.|++..+..+.. .+|+.|+|++|+|++..+..|..+++|+
T Consensus 168 ~~~~l~~L~~l~l-------------------~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 227 (276)
T 2z62_A 168 DLRVLHQMPLLNL-------------------SLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQ 227 (276)
T ss_dssp GGHHHHTCTTCCE-------------------EEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCC
T ss_pred Hhhhhhhccccce-------------------eeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhccccccc
Confidence 6666555552211 4666677777666665554 4899999999999987777788899999
Q ss_pred EEEeeCCcCCCCCchhhhccCCceeeeccCccCCCCCCCCCCCC-CccceeccCCCCCCCCCCcCccCCCCCCCCCc
Q 002899 296 FMYLTGNKLTGPVPKYIFNSNKNVDISLNNFTWESSDPIECPRG-SVNLVESYSSPRNKLDKVHPCLRQNFPCSAPA 371 (869)
Q Consensus 296 ~L~Ls~N~l~~~~p~~~~~~l~~l~ls~N~~~~~~~~p~~C~c~-~~~~~~~l~~~~~~~~~~~~~~~~~~~C~~p~ 371 (869)
.|+|++| ||.|+|. +.++..|+........ ....|+.|.
T Consensus 228 ~L~l~~N------------------------------~~~c~c~~l~~l~~~~~~~~~~~~-------~~~~C~~~~ 267 (276)
T 2z62_A 228 KIWLHTN------------------------------PWDCSCPRIDYLSRWLNKNSQKEQ-------GSAKCSGSG 267 (276)
T ss_dssp EEECCSS------------------------------CBCCCTTTTHHHHHHHHHTGGGBC-------SCCBBTTTC
T ss_pred EEEccCC------------------------------cccccCCchHHHHHHHHhcccccC-------CCceeeCCC
Confidence 9999988 7779996 6667788765433322 234566654
No 298
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=9.6e-28 Score=260.59 Aligned_cols=234 Identities=19% Similarity=0.204 Sum_probs=199.1
Q ss_pred CcceEEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCC--chhhccc-cceEEEeecccCCCCCchhhcCccccc
Q 002899 52 ATCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSF--SPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLK 128 (869)
Q Consensus 52 ~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~--~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 128 (869)
...+++.|+|++|+++...+..|.++++|++|+|++|.|+... +..+..+ +|++|+|++|.++. +|..+..+++|+
T Consensus 26 ~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~-l~~~~~~l~~L~ 104 (306)
T 2z66_A 26 IPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLE 104 (306)
T ss_dssp CCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEEE-EEEEEETCTTCC
T ss_pred CCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCcccc-ChhhcCCCCCCC
Confidence 3457999999999999655556899999999999999998553 4444444 89999999999984 566799999999
Q ss_pred cccccccccCCCCC-ccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCC-CCccccCCCCcccEEEccC
Q 002899 129 NLSIEGNLFTGSIP-PDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSG-KIPEFIGKWKKIQKLHIQG 206 (869)
Q Consensus 129 ~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~ 206 (869)
+|+|++|++++..+ ..+..+++|++|+|++|++.+..+..+.++++|++|+|++|++++ ..|..|..+++|+.|+|++
T Consensus 105 ~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~ 184 (306)
T 2z66_A 105 HLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQ 184 (306)
T ss_dssp EEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTT
T ss_pred EEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCC
Confidence 99999999997655 579999999999999999998889999999999999999999986 6889999999999999999
Q ss_pred CcCCCCchHhhhcCCCCCEEEcCCCCCCCCcccccccccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCCCch
Q 002899 207 SSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPT 286 (869)
Q Consensus 207 N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 286 (869)
|.+++..|..+..+++|+.|+|++ |+|++..+..+..+++|+.|+|++|++++..|.
T Consensus 185 n~l~~~~~~~~~~l~~L~~L~L~~-----------------------N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 241 (306)
T 2z66_A 185 CQLEQLSPTAFNSLSSLQVLNMSH-----------------------NNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQ 241 (306)
T ss_dssp SCCCEECTTTTTTCTTCCEEECTT-----------------------SCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSS
T ss_pred CCcCCcCHHHhcCCCCCCEEECCC-----------------------CccCccChhhccCcccCCEeECCCCCCcccCHH
Confidence 999988888999888888777764 555555555677788888888888888888888
Q ss_pred hhhcCC-CCCEEEeeCCcCCCCCc
Q 002899 287 TFEKLA-KTNFMYLTGNKLTGPVP 309 (869)
Q Consensus 287 ~~~~l~-~L~~L~Ls~N~l~~~~p 309 (869)
.+..++ +|+.|+|++|++++..+
T Consensus 242 ~~~~~~~~L~~L~L~~N~~~~~c~ 265 (306)
T 2z66_A 242 ELQHFPSSLAFLNLTQNDFACTCE 265 (306)
T ss_dssp SCCCCCTTCCEEECTTCCEECSGG
T ss_pred HHHhhhccCCEEEccCCCeecccC
Confidence 888874 88888888888876543
No 299
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=5.3e-27 Score=257.32 Aligned_cols=224 Identities=21% Similarity=0.286 Sum_probs=173.9
Q ss_pred CCCCCEEEeecCcCCCCCchhhccccceEEEeecccCCCCCchhhcCccccccccccccccCCCCCccccCCCCccEEEe
Q 002899 77 LRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLIL 156 (869)
Q Consensus 77 l~~L~~L~Ls~N~i~~~~~~~~~~l~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 156 (869)
.+.++.|+|++|.++.+++..+...+|++|+|++|.++ .+|..+..+++|++|+|++|.++ .+|..+..+++|++|+|
T Consensus 80 ~~~l~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L 157 (328)
T 4fcg_A 80 QPGRVALELRSVPLPQFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSI 157 (328)
T ss_dssp STTCCEEEEESSCCSSCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEE
T ss_pred ccceeEEEccCCCchhcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEEC
Confidence 46788888888888855444444337888888888887 66777788888888888888887 66777888888888888
Q ss_pred ecccccccCCccccC---------CCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcCCCCchHhhhcCCCCCEEE
Q 002899 157 SSNSFTGELPAELTK---------LTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLR 227 (869)
Q Consensus 157 s~N~i~~~~p~~~~~---------l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~ 227 (869)
++|++.+.+|..+.. +++|++|+|++|+++ .+|..|..+++|++|+|++|.+++ +|..+..+++|+.|
T Consensus 158 ~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L- 234 (328)
T 4fcg_A 158 RACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEEL- 234 (328)
T ss_dssp EEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEE-
T ss_pred CCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEE-
Confidence 887777777766543 677777777777776 566666777777777777777764 34456666655555
Q ss_pred cCCCCCCCCcccccccccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCCCchhhhcCCCCCEEEeeCCcCCCC
Q 002899 228 ISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGP 307 (869)
Q Consensus 228 L~~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 307 (869)
+|++|.+.+.+|..|..+++|+.|+|++|++.+.+|..+..+++|+.|+|++|++.+.
T Consensus 235 ----------------------~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~ 292 (328)
T 4fcg_A 235 ----------------------DLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSR 292 (328)
T ss_dssp ----------------------ECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCC
T ss_pred ----------------------ECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhh
Confidence 4557777778899999999999999999999999999999999999999999999999
Q ss_pred Cchhh--hccCCceeeeccCcc
Q 002899 308 VPKYI--FNSNKNVDISLNNFT 327 (869)
Q Consensus 308 ~p~~~--~~~l~~l~ls~N~~~ 327 (869)
+|..+ ...++.+++..|.+.
T Consensus 293 iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 293 LPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp CCGGGGGSCTTCEEECCGGGSC
T ss_pred ccHHHhhccCceEEeCCHHHHH
Confidence 99998 457788888877554
No 300
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.95 E-value=1.4e-26 Score=255.95 Aligned_cols=259 Identities=18% Similarity=0.285 Sum_probs=203.3
Q ss_pred ceEEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhhcCccccccccc
Q 002899 54 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSI 132 (869)
Q Consensus 54 ~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 132 (869)
.+++.|+++++.++. ++ .+..+++|++|+|++|.+++..+ +..+ +|++|+|++|.++.. +.+..+++|++|+|
T Consensus 44 ~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L~~L~l 117 (347)
T 4fmz_A 44 ESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDI--SALQNLTNLRELYL 117 (347)
T ss_dssp TTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCSEEEC
T ss_pred ccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccCc--hHHcCCCcCCEEEC
Confidence 357888898888874 44 48888999999999998887665 5555 899999999988864 35888899999999
Q ss_pred cccccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcCCCC
Q 002899 133 EGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGP 212 (869)
Q Consensus 133 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 212 (869)
++|.+++. +. +..+++|++|++++|.....+ ..+..+++|++|++++|.+.+..+ +..+++|+.|++++|.+.+.
T Consensus 118 ~~n~i~~~-~~-~~~l~~L~~L~l~~n~~~~~~-~~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~ 192 (347)
T 4fmz_A 118 NEDNISDI-SP-LANLTKMYSLNLGANHNLSDL-SPLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDI 192 (347)
T ss_dssp TTSCCCCC-GG-GTTCTTCCEEECTTCTTCCCC-GGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCC
T ss_pred cCCcccCc-hh-hccCCceeEEECCCCCCcccc-cchhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccc
Confidence 99988854 33 888889999999998666443 348888899999999998885544 78888999999999988865
Q ss_pred chHhhhcCCCCCEEEcCCCCCCCCcccccccccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCCCchhhhcCC
Q 002899 213 IPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLA 292 (869)
Q Consensus 213 ~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 292 (869)
.+ +..+++|+.|++++|.+..... .....+|+.|+|++|.+++..+ +..+++|+.|+|++|++++. ..+..++
T Consensus 193 ~~--~~~l~~L~~L~l~~n~l~~~~~-~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~ 265 (347)
T 4fmz_A 193 SP--LASLTSLHYFTAYVNQITDITP-VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLT 265 (347)
T ss_dssp GG--GGGCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCT
T ss_pred cc--ccCCCccceeecccCCCCCCch-hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCC
Confidence 44 8888899999999988887654 3334478999999998886555 78889999999999988854 4688888
Q ss_pred CCCEEEeeCCcCCCCCchhhhccCCceeeeccCccCCC
Q 002899 293 KTNFMYLTGNKLTGPVPKYIFNSNKNVDISLNNFTWES 330 (869)
Q Consensus 293 ~L~~L~Ls~N~l~~~~p~~~~~~l~~l~ls~N~~~~~~ 330 (869)
+|+.|++++|++++...-.-++.++.|++++|.++...
T Consensus 266 ~L~~L~l~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~ 303 (347)
T 4fmz_A 266 KLKMLNVGSNQISDISVLNNLSQLNSLFLNNNQLGNED 303 (347)
T ss_dssp TCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCGGG
T ss_pred CcCEEEccCCccCCChhhcCCCCCCEEECcCCcCCCcC
Confidence 99999999998886522222567888999999876543
No 301
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.95 E-value=6.9e-27 Score=279.54 Aligned_cols=153 Identities=20% Similarity=0.250 Sum_probs=138.9
Q ss_pred EEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhhcCccccccccccccc
Q 002899 58 TIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNL 136 (869)
Q Consensus 58 ~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 136 (869)
.+++++.+++ .+|..+. +++++|||++|+|+++++..|..+ +|++|+|++|+|+++.+++|.++++|++|+|++|+
T Consensus 35 ~~~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~ 111 (635)
T 4g8a_A 35 TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 111 (635)
T ss_dssp EEECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred EEECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCc
Confidence 4688899999 6787664 479999999999999999999988 89999999999999999999999999999999999
Q ss_pred cCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCC-CccccCCCCcccEEEccCCcCCCCc
Q 002899 137 FTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGK-IPEFIGKWKKIQKLHIQGSSLEGPI 213 (869)
Q Consensus 137 l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~ 213 (869)
|++..+..|.++++|++|+|++|+|++..+..|+++++|++|+|++|++++. .|..+..+++|++|+|++|+|++..
T Consensus 112 l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 189 (635)
T 4g8a_A 112 IQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIY 189 (635)
T ss_dssp CCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEEC
T ss_pred CCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccc
Confidence 9977778899999999999999999987777899999999999999999864 6788999999999999999886543
No 302
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.94 E-value=3.2e-26 Score=263.82 Aligned_cols=257 Identities=25% Similarity=0.347 Sum_probs=151.0
Q ss_pred ceEEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhhcCccccccccc
Q 002899 54 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSI 132 (869)
Q Consensus 54 ~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 132 (869)
.+++.|+|++|.+++..+ +.++++|++|+|++|.+++..+ +..+ +|++|+|++|++++..+ +..+++|++|+|
T Consensus 68 ~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l 141 (466)
T 1o6v_A 68 NNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLEL 141 (466)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEE
T ss_pred cCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEEC
Confidence 468888888888886543 8888888888888888887766 5555 78888888888886543 888888888888
Q ss_pred cccccCCCCCccccCCCC---------------------ccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCcc
Q 002899 133 EGNLFTGSIPPDIRKLIN---------------------LQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPE 191 (869)
Q Consensus 133 s~N~l~~~~~~~~~~l~~---------------------L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 191 (869)
++|.+++. + .+..+++ |++|++++|++++. ..+..+++|++|++++|++++..+
T Consensus 142 ~~n~l~~~-~-~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~- 216 (466)
T 1o6v_A 142 SSNTISDI-S-ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP- 216 (466)
T ss_dssp EEEEECCC-G-GGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-
T ss_pred CCCccCCC-h-hhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc-
Confidence 88888743 2 3444444 44444444444421 124444444444444444443333
Q ss_pred ccCCCCcccEEEccCCcCCCCchHhhhcCCCCCEEEcCCCCCCCCcccccccccceEEEcccccCccCCCcccCCCCCcC
Q 002899 192 FIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLK 271 (869)
Q Consensus 192 ~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~ 271 (869)
++.+++|+.|++++|.+++. ..+..+++|+.|++++|.+..... .....+|+.|+|++|.+++..+ +..+++|+
T Consensus 217 -~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~ 290 (466)
T 1o6v_A 217 -LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP-LSGLTKLTELKLGANQISNISP--LAGLTALT 290 (466)
T ss_dssp -GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCCCCGG--GTTCTTCS
T ss_pred -ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh-hhcCCCCCEEECCCCccCcccc--ccCCCccC
Confidence 34444555555555554432 234455555555555555544332 1222245555555555554333 55555566
Q ss_pred EEeccCCCCCCCCchhhhcCCCCCEEEeeCCcCCCCCchhhhccCCceeeeccCccCC
Q 002899 272 NIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFNSNKNVDISLNNFTWE 329 (869)
Q Consensus 272 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~l~ls~N~~~~~ 329 (869)
.|+|++|++++..+ +..+++|+.|+|++|++++..|..-+..++.|++++|.++..
T Consensus 291 ~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~ 346 (466)
T 1o6v_A 291 NLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDV 346 (466)
T ss_dssp EEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGGGGGCTTCCEEECCSSCCCCC
T ss_pred eEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchhhccCccCCEeECCCCccCCc
Confidence 66666666554333 555566666666666666555533345556666666655543
No 303
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.94 E-value=1.9e-27 Score=263.72 Aligned_cols=257 Identities=19% Similarity=0.230 Sum_probs=225.7
Q ss_pred cceEEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhhcCcccccccc
Q 002899 53 TCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLS 131 (869)
Q Consensus 53 ~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 131 (869)
..+++.|++++|++++..+..|.++++|++|+|++|.|++..+..|..+ +|++|+|++|++++..+..|.++++|++|+
T Consensus 51 ~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 130 (353)
T 2z80_A 51 TEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLN 130 (353)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEE
T ss_pred cccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEE
Confidence 3479999999999998777799999999999999999999988889887 899999999999988777899999999999
Q ss_pred ccccccCCCCC-ccccCCCCccEEEeecc-cccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcC
Q 002899 132 IEGNLFTGSIP-PDIRKLINLQKLILSSN-SFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSL 209 (869)
Q Consensus 132 Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N-~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 209 (869)
|++|+++...+ ..|..+++|++|++++| .+....+..|.++++|++|++++|++++..|..|..+++|++|+|++|.+
T Consensus 131 L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l 210 (353)
T 2z80_A 131 LLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQH 210 (353)
T ss_dssp CTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCS
T ss_pred CCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCcc
Confidence 99999995444 47899999999999999 57767778899999999999999999998899999999999999999999
Q ss_pred CCCchHhhhcCCCCCEEEcCCCCCCCCccccccc----ccceEEEcccccCcc----CCCcccCCCCCcCEEeccCCCCC
Q 002899 210 EGPIPASISALTSLTDLRISDLKGSESAFPKLDK----MNLKTLILTKCLIHG----EIPDYIGDMTKLKNIDLSFNNLT 281 (869)
Q Consensus 210 ~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~----~~L~~L~Ls~N~i~~----~~p~~~~~l~~L~~L~Ls~N~l~ 281 (869)
.......+..+++|+.|+|++|.++...+..+.. ..++.++|+++.+.+ .+|..+..+++|+.|+|++|+|+
T Consensus 211 ~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~ 290 (353)
T 2z80_A 211 ILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK 290 (353)
T ss_dssp TTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC
T ss_pred ccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC
Confidence 8655566778999999999999998876554432 258888888888876 36778899999999999999999
Q ss_pred CCCchhhhcCCCCCEEEeeCCcCCCCCc
Q 002899 282 GGIPTTFEKLAKTNFMYLTGNKLTGPVP 309 (869)
Q Consensus 282 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 309 (869)
...+..|..+++|+.|+|++|++++..|
T Consensus 291 ~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 291 SVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 5544446999999999999999998876
No 304
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.94 E-value=1.6e-26 Score=265.32 Aligned_cols=230 Identities=18% Similarity=0.200 Sum_probs=206.2
Q ss_pred CcceEEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhhcCccccccc
Q 002899 52 ATCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNL 130 (869)
Q Consensus 52 ~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 130 (869)
...+++.|+|++|+|++..+..|.++++|++|+|++|.|+++.+..|..+ +|++|+|++|+++.+.+..|..+++|++|
T Consensus 73 ~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 152 (452)
T 3zyi_A 73 IPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLREL 152 (452)
T ss_dssp CCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEE
T ss_pred CCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEE
Confidence 34579999999999999999999999999999999999999999999988 89999999999998888889999999999
Q ss_pred cccccccCCCCCccccCCCCccEEEeec-ccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcC
Q 002899 131 SIEGNLFTGSIPPDIRKLINLQKLILSS-NSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSL 209 (869)
Q Consensus 131 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~-N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 209 (869)
+|++|+|+...+..|..+++|++|+|++ |.+....+..|.++++|++|+|++|++++. | .+..+++|+.|+|++|.+
T Consensus 153 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l 230 (452)
T 3zyi_A 153 WLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHF 230 (452)
T ss_dssp ECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCC
T ss_pred ECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcC
Confidence 9999999977777899999999999999 455545555799999999999999999954 4 588999999999999999
Q ss_pred CCCchHhhhcCCCCCEEEcCCCCCCCCcccccccccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCCCchhhh
Q 002899 210 EGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFE 289 (869)
Q Consensus 210 ~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 289 (869)
++..|..|.++++|+.|+|+ +|+|++..+..|..+++|+.|+|++|+|++..+..|.
T Consensus 231 ~~~~~~~~~~l~~L~~L~L~-----------------------~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 287 (452)
T 3zyi_A 231 PEIRPGSFHGLSSLKKLWVM-----------------------NSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFT 287 (452)
T ss_dssp SEECGGGGTTCTTCCEEECT-----------------------TSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSST
T ss_pred cccCcccccCccCCCEEEeC-----------------------CCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhc
Confidence 99889999999888877766 5666667778888999999999999999988888889
Q ss_pred cCCCCCEEEeeCCcCCC
Q 002899 290 KLAKTNFMYLTGNKLTG 306 (869)
Q Consensus 290 ~l~~L~~L~Ls~N~l~~ 306 (869)
.+++|+.|+|++|++.-
T Consensus 288 ~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 288 PLRYLVELHLHHNPWNC 304 (452)
T ss_dssp TCTTCCEEECCSSCEEC
T ss_pred cccCCCEEEccCCCcCC
Confidence 99999999999998864
No 305
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=4.5e-28 Score=264.66 Aligned_cols=257 Identities=17% Similarity=0.140 Sum_probs=220.9
Q ss_pred eEEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhhcCcccccccccc
Q 002899 55 HVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIE 133 (869)
Q Consensus 55 ~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 133 (869)
+...++++.+++...+...+..+++|++|+|++|.|++..+..|..+ +|++|+|++|++++..+ +..+++|++|+|+
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 46778888999887777777888899999999999999999999888 89999999999997665 9999999999999
Q ss_pred ccccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcCCCCc
Q 002899 134 GNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPI 213 (869)
Q Consensus 134 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 213 (869)
+|++++.. ..++|++|++++|+|++..+. .+++|++|+|++|++++..+..|..+++|+.|+|++|.+++..
T Consensus 89 ~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 160 (317)
T 3o53_A 89 NNYVQELL-----VGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVN 160 (317)
T ss_dssp SSEEEEEE-----ECTTCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEE
T ss_pred CCcccccc-----CCCCcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCccc
Confidence 99998433 348999999999999966544 3678999999999999888889999999999999999999877
Q ss_pred hHhh-hcCCCCCEEEcCCCCCCCCcccccccccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCCCchhhhcCC
Q 002899 214 PASI-SALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLA 292 (869)
Q Consensus 214 ~~~l-~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 292 (869)
+..+ ..+++|+.|+|++|.++..+... ...+|+.|+|++|+|++..+. +..+++|+.|+|++|+|+ .+|..+..++
T Consensus 161 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~-~l~~L~~L~Ls~N~l~~l~~~-~~~l~~L~~L~L~~N~l~-~l~~~~~~l~ 237 (317)
T 3o53_A 161 FAELAASSDTLEHLNLQYNFIYDVKGQV-VFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLV-LIEKALRFSQ 237 (317)
T ss_dssp GGGGGGGTTTCCEEECTTSCCCEEECCC-CCTTCCEEECCSSCCCEECGG-GGGGTTCSEEECTTSCCC-EECTTCCCCT
T ss_pred HHHHhhccCcCCEEECCCCcCccccccc-ccccCCEEECCCCcCCcchhh-hcccCcccEEECcCCccc-chhhHhhcCC
Confidence 7776 47999999999999998764332 355899999999999975554 889999999999999999 5788899999
Q ss_pred CCCEEEeeCCcCC-CCCchhh--hccCCceeeecc
Q 002899 293 KTNFMYLTGNKLT-GPVPKYI--FNSNKNVDISLN 324 (869)
Q Consensus 293 ~L~~L~Ls~N~l~-~~~p~~~--~~~l~~l~ls~N 324 (869)
+|+.|+|++|+++ +.+|..+ .+.++.++++.|
T Consensus 238 ~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~ 272 (317)
T 3o53_A 238 NLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTV 272 (317)
T ss_dssp TCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHH
T ss_pred CCCEEEccCCCccCcCHHHHHhccccceEEECCCc
Confidence 9999999999998 6666665 346677888744
No 306
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=5.8e-28 Score=283.43 Aligned_cols=185 Identities=19% Similarity=0.146 Sum_probs=129.5
Q ss_pred eeeccCceEEEEEE-EcCCcEEEEEEecccC----------chhhHHHHHHHHHHHhc-CCCceeeEEeEEeeCceEEEE
Q 002899 645 KVGEGGFGSVYKGI-LSDGTVIAVKQLSSKS----------RQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQLLLV 712 (869)
Q Consensus 645 ~IG~G~fG~Vyka~-~~~g~~VAvK~~~~~~----------~~~~~~f~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV 712 (869)
..+.|++|.+..++ .-.|+.+|||.+.... ....++|.+|+++|+++ .|+||+++++++++++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 35667777666554 2357889999986531 12245799999999999 799999999999999999999
Q ss_pred EEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceee
Q 002899 713 YEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 792 (869)
Q Consensus 713 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~ 792 (869)
|||++|++|.+.|.... +++.. +|+.||++||+|+|++| ||||||||+|||+++++.+||+|||+|+..
T Consensus 321 MEyv~G~~L~d~i~~~~-----~l~~~---~I~~QIl~AL~ylH~~G---IIHRDIKPeNILL~~dg~vKL~DFGlAr~~ 389 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAGE-----EIDRE---KILGSLLRSLAALEKQG---FWHDDVRPWNVMVDARQHARLIDFGSIVTT 389 (569)
T ss_dssp EECCCSEEHHHHHHTTC-----CCCHH---HHHHHHHHHHHHHHHTT---CEESCCCGGGEEECTTSCEEECCCTTEESC
T ss_pred EecCCCCcHHHHHHhCC-----CCCHH---HHHHHHHHHHHHHHHCC---ceeccCchHhEEECCCCCEEEeecccCeeC
Confidence 99999999999997653 45543 58999999999999998 999999999999999999999999999876
Q ss_pred cCCCccccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCC
Q 002899 793 EEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSN 842 (869)
Q Consensus 793 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p 842 (869)
...... ....+||++|||||++.+ .+..++|+||+|+++++|.+|..|
T Consensus 390 ~~~~~~-~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 390 PQDCSW-PTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp C---CC-SHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CCCCcc-ccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 543322 234679999999999875 457789999999998877665443
No 307
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.94 E-value=6.4e-26 Score=261.31 Aligned_cols=261 Identities=25% Similarity=0.330 Sum_probs=209.8
Q ss_pred cceEEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCc-------------
Q 002899 53 TCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFP------------- 118 (869)
Q Consensus 53 ~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~------------- 118 (869)
..+++.|++++|.+++..+ +.++++|++|+|++|.+++..+ +..+ +|++|+|++|.+++...
T Consensus 89 l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~ 164 (466)
T 1o6v_A 89 LTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG 164 (466)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEE
T ss_pred cccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEECCCCccCCChhhccCCcccEeecC
Confidence 3578899999999986554 8899999999999999987754 5555 78899998888875321
Q ss_pred ------hhhcCccccccccccccccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccc
Q 002899 119 ------KVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEF 192 (869)
Q Consensus 119 ------~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 192 (869)
..+.++++|++|+|++|.+++. ..+..+++|++|++++|++++..| +..+++|++|+|++|++++. ..
T Consensus 165 ~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~ 238 (466)
T 1o6v_A 165 NQVTDLKPLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GT 238 (466)
T ss_dssp ESCCCCGGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GG
T ss_pred CcccCchhhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hh
Confidence 2366778899999999998853 358889999999999999986555 77789999999999999853 46
Q ss_pred cCCCCcccEEEccCCcCCCCchHhhhcCCCCCEEEcCCCCCCCCcccccccccceEEEcccccCccCCCcccCCCCCcCE
Q 002899 193 IGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKN 272 (869)
Q Consensus 193 ~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~ 272 (869)
+..+++|+.|++++|.+++..+ +..+++|+.|++++|.++..+. .....+|+.|+|++|++++..+ +..+++|+.
T Consensus 239 l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~ 313 (466)
T 1o6v_A 239 LASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP-LAGLTALTNLELNENQLEDISP--ISNLKNLTY 313 (466)
T ss_dssp GGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSE
T ss_pred hhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc-ccCCCccCeEEcCCCcccCchh--hcCCCCCCE
Confidence 7888999999999999987655 8889999999999998887654 3334479999999999987655 778899999
Q ss_pred EeccCCCCCCCCchhhhcCCCCCEEEeeCCcCCCCCchhhhccCCceeeeccCccCCC
Q 002899 273 IDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFNSNKNVDISLNNFTWES 330 (869)
Q Consensus 273 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~l~ls~N~~~~~~ 330 (869)
|+|++|++++..| +..+++|+.|++++|++++...-.-+..++.|++++|+++...
T Consensus 314 L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~ 369 (466)
T 1o6v_A 314 LTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLT 369 (466)
T ss_dssp EECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCBCG
T ss_pred EECcCCcCCCchh--hccCccCCEeECCCCccCCchhhccCCCCCEEeCCCCccCccc
Confidence 9999999987666 7888999999999999987632222567888999999887654
No 308
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=1.2e-27 Score=276.82 Aligned_cols=266 Identities=17% Similarity=0.152 Sum_probs=212.1
Q ss_pred eccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhhcCccccccccccccccC
Q 002899 60 ALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFT 138 (869)
Q Consensus 60 ~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 138 (869)
++...++...+......+++|+.|+|++|.|++.+|..|..+ +|++|+|++|.+++..| |..+++|++|+|++|.|+
T Consensus 16 ~~~~~~l~~~l~~l~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~ 93 (487)
T 3oja_A 16 KVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQ 93 (487)
T ss_dssp SCCTTTHHHHHHTTSTTGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEE
T ss_pred cCchhhhHHHHHHhcccCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCC
Confidence 334444433333333444589999999999999988888887 89999999999987766 899999999999999999
Q ss_pred CCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcCCCCchHhhh
Q 002899 139 GSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASIS 218 (869)
Q Consensus 139 ~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~ 218 (869)
+.. ..++|++|+|++|.|++..+. .+++|+.|+|++|+|++..|..|+.+++|+.|+|++|.+++.+|..+.
T Consensus 94 ~l~-----~~~~L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~ 165 (487)
T 3oja_A 94 ELL-----VGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELA 165 (487)
T ss_dssp EEE-----ECTTCCEEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGG
T ss_pred CCC-----CCCCcCEEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHh
Confidence 543 238999999999999976554 458899999999999998899999999999999999999998888876
Q ss_pred -cCCCCCEEEcCCCCCCCCcccccccccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCCCchhhhcCCCCCEE
Q 002899 219 -ALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFM 297 (869)
Q Consensus 219 -~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 297 (869)
.+++|+.|+|++|.++..+... ...+|+.|+|++|.|++.+|. +..+++|+.|+|++|+|++ +|..+..+++|+.|
T Consensus 166 ~~l~~L~~L~Ls~N~l~~~~~~~-~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L 242 (487)
T 3oja_A 166 ASSDTLEHLNLQYNFIYDVKGQV-VFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHF 242 (487)
T ss_dssp GGTTTCCEEECTTSCCCEEECCC-CCTTCCEEECCSSCCCEECGG-GGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEE
T ss_pred hhCCcccEEecCCCccccccccc-cCCCCCEEECCCCCCCCCCHh-HcCCCCccEEEecCCcCcc-cchhhccCCCCCEE
Confidence 8999999999999998764322 355899999999999976655 8899999999999999995 77789999999999
Q ss_pred EeeCCcCC-CCCchhh--hccCCceeeeccCccCCCCCCCCCCCC
Q 002899 298 YLTGNKLT-GPVPKYI--FNSNKNVDISLNNFTWESSDPIECPRG 339 (869)
Q Consensus 298 ~Ls~N~l~-~~~p~~~--~~~l~~l~ls~N~~~~~~~~p~~C~c~ 339 (869)
+|++|+++ +.+|..+ ...++.++++.+.. ....+|+.|.|.
T Consensus 243 ~l~~N~l~c~~~~~~~~~l~~L~~l~~~~~~~-~~~~~~~~c~~~ 286 (487)
T 3oja_A 243 DLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKK-LTGQNEEECTVP 286 (487)
T ss_dssp ECTTCCBCHHHHHHHHTTCHHHHHHHHHHHHH-HTSSSSCCCSST
T ss_pred EcCCCCCcCcchHHHHHhCCCCcEEecccccc-ccCCCcccccCC
Confidence 99999998 5566555 33455566652110 112336777664
No 309
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.94 E-value=2.7e-26 Score=262.43 Aligned_cols=229 Identities=22% Similarity=0.248 Sum_probs=205.5
Q ss_pred CcceEEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhhcCccccccc
Q 002899 52 ATCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNL 130 (869)
Q Consensus 52 ~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 130 (869)
....++.|+|++|++++..+..|.++++|++|+|++|.|+++.+..|..+ +|++|+|++|+++.+.+..|..+++|++|
T Consensus 62 ~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 141 (440)
T 3zyj_A 62 ISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKEL 141 (440)
T ss_dssp CCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEE
T ss_pred CCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCcee
Confidence 34568999999999999889999999999999999999999999999988 89999999999998888899999999999
Q ss_pred cccccccCCCCCccccCCCCccEEEeecc-cccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcC
Q 002899 131 SIEGNLFTGSIPPDIRKLINLQKLILSSN-SFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSL 209 (869)
Q Consensus 131 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N-~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 209 (869)
+|++|+|+...+..|..+++|++|+|++| .+....+..|.++++|++|+|++|+++. +| .+..+++|+.|+|++|++
T Consensus 142 ~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l 219 (440)
T 3zyj_A 142 WLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IP-NLTPLIKLDELDLSGNHL 219 (440)
T ss_dssp ECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CC-CCTTCSSCCEEECTTSCC
T ss_pred eCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-cc-ccCCCcccCEEECCCCcc
Confidence 99999999877779999999999999995 5554555579999999999999999994 45 488999999999999999
Q ss_pred CCCchHhhhcCCCCCEEEcCCCCCCCCcccccccccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCCCchhhh
Q 002899 210 EGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFE 289 (869)
Q Consensus 210 ~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 289 (869)
++..|..|.++++|+.|+|+ +|+|++..+..|.++++|+.|+|++|+|++..+..|.
T Consensus 220 ~~~~~~~~~~l~~L~~L~L~-----------------------~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 276 (440)
T 3zyj_A 220 SAIRPGSFQGLMHLQKLWMI-----------------------QSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFT 276 (440)
T ss_dssp CEECTTTTTTCTTCCEEECT-----------------------TCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTS
T ss_pred CccChhhhccCccCCEEECC-----------------------CCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhc
Confidence 98889999999888777766 5666667778888999999999999999988888889
Q ss_pred cCCCCCEEEeeCCcCC
Q 002899 290 KLAKTNFMYLTGNKLT 305 (869)
Q Consensus 290 ~l~~L~~L~Ls~N~l~ 305 (869)
.+++|+.|+|++|++.
T Consensus 277 ~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 277 PLHHLERIHLHHNPWN 292 (440)
T ss_dssp SCTTCCEEECCSSCEE
T ss_pred cccCCCEEEcCCCCcc
Confidence 9999999999999986
No 310
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.94 E-value=7.2e-28 Score=262.46 Aligned_cols=248 Identities=19% Similarity=0.210 Sum_probs=208.7
Q ss_pred cccCCCCCCEEEeecCcCCCCCchhhccccceEEEeecccCC-CCCchhhc-------CccccccccccccccCCCCCcc
Q 002899 73 ELSKLRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLS-GPFPKVLT-------NITTLKNLSIEGNLFTGSIPPD 144 (869)
Q Consensus 73 ~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l~L~~L~Ls~N~l~-~~~~~~~~-------~l~~L~~L~Ls~N~l~~~~~~~ 144 (869)
.++..++|+.|++++|.+ .+|..+... |+.|+|++|+++ ..+|..+. ++++|++|+|++|++++.+|..
T Consensus 38 ~~~~~~~L~~l~l~~n~l--~~p~~~~~~-L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 38 LYGGGRSLEYLLKRVDTE--ADLGQFTDI-IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEEECTTHHHHCCTT--CCCHHHHHH-HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EEccCCCceeEeeccccc--ccHHHHHHH-HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 456678899999999999 445544433 889999999994 45666665 7999999999999999999987
Q ss_pred c--cCCCCccEEEeecccccccCCccccCC-----CCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcCCCC--chH
Q 002899 145 I--RKLINLQKLILSSNSFTGELPAELTKL-----TNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGP--IPA 215 (869)
Q Consensus 145 ~--~~l~~L~~L~Ls~N~i~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--~~~ 215 (869)
+ ..+++|++|+|++|++++. |..+..+ ++|++|+|++|++++..+..|+.+++|++|+|++|++.+. .+.
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 193 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLIS 193 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHH
T ss_pred HHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHH
Confidence 6 8999999999999999977 8888777 9999999999999998889999999999999999998865 344
Q ss_pred hh--hcCCCCCEEEcCCCCCCCCcc---ccc-ccccceEEEcccccCccCCC-cccCCCCCcCEEeccCCCCCCCCchhh
Q 002899 216 SI--SALTSLTDLRISDLKGSESAF---PKL-DKMNLKTLILTKCLIHGEIP-DYIGDMTKLKNIDLSFNNLTGGIPTTF 288 (869)
Q Consensus 216 ~l--~~l~~L~~L~L~~n~~~~~~~---~~~-~~~~L~~L~Ls~N~i~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 288 (869)
.+ ..+++|+.|+|++|.++..+. ..+ ...+|+.|+|++|+|++..| ..+..+++|+.|+|++|+|+ .+|..+
T Consensus 194 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~ 272 (312)
T 1wwl_A 194 ALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGL 272 (312)
T ss_dssp HSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSC
T ss_pred HHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhc
Confidence 55 899999999999999985332 111 22489999999999998875 55677899999999999999 777766
Q ss_pred hcCCCCCEEEeeCCcCCCCCchh-hhccCCceeeeccCccC
Q 002899 289 EKLAKTNFMYLTGNKLTGPVPKY-IFNSNKNVDISLNNFTW 328 (869)
Q Consensus 289 ~~l~~L~~L~Ls~N~l~~~~p~~-~~~~l~~l~ls~N~~~~ 328 (869)
. ++|+.|+|++|+|++. |.. -++.++.|++++|+++.
T Consensus 273 ~--~~L~~L~Ls~N~l~~~-p~~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 273 P--AKLSVLDLSYNRLDRN-PSPDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp C--SEEEEEECCSSCCCSC-CCTTTSCEEEEEECTTCTTTC
T ss_pred c--CCceEEECCCCCCCCC-hhHhhCCCCCEEeccCCCCCC
Confidence 6 8999999999999977 551 25678899999997764
No 311
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.94 E-value=6.4e-27 Score=251.44 Aligned_cols=237 Identities=17% Similarity=0.168 Sum_probs=204.3
Q ss_pred CcceEEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeeccc-CCCCCchhhcCcccccc
Q 002899 52 ATCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNR-LSGPFPKVLTNITTLKN 129 (869)
Q Consensus 52 ~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~ 129 (869)
...+++.|++++|++++..+..|.++++|++|+|++|.+++..+..|..+ +|++|+|++|. ++...+..|..+++|++
T Consensus 30 ~~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~ 109 (285)
T 1ozn_A 30 IPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHT 109 (285)
T ss_dssp CCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCE
T ss_pred CCCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCE
Confidence 34579999999999998888899999999999999999999989889887 89999999997 88888899999999999
Q ss_pred ccccccccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcC
Q 002899 130 LSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSL 209 (869)
Q Consensus 130 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 209 (869)
|+|++|.+++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|.+
T Consensus 110 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 189 (285)
T 1ozn_A 110 LHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRV 189 (285)
T ss_dssp EECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred EECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcc
Confidence 99999999988888999999999999999999977777899999999999999999987778899999999999999999
Q ss_pred CCCchHhhhcCCCCCEEEcCCCCCCCCcccccccccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCCCchhhh
Q 002899 210 EGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFE 289 (869)
Q Consensus 210 ~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 289 (869)
++..|..+..+++|+.|+|+ +|+|++..+..+..+++|+.|+|++|++....+.. .
T Consensus 190 ~~~~~~~~~~l~~L~~L~l~-----------------------~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~-~ 245 (285)
T 1ozn_A 190 AHVHPHAFRDLGRLMTLYLF-----------------------ANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR-P 245 (285)
T ss_dssp CEECTTTTTTCTTCCEEECC-----------------------SSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH-H
T ss_pred cccCHhHccCcccccEeeCC-----------------------CCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH-H
Confidence 98889999988877777766 55666566667888999999999999988544321 1
Q ss_pred cCCCCCEEEeeCCcCCCCCchhh
Q 002899 290 KLAKTNFMYLTGNKLTGPVPKYI 312 (869)
Q Consensus 290 ~l~~L~~L~Ls~N~l~~~~p~~~ 312 (869)
-+..|+.+..+.|.+....|..+
T Consensus 246 ~~~~l~~~~~~~~~~~c~~p~~l 268 (285)
T 1ozn_A 246 LWAWLQKFRGSSSEVPCSLPQRL 268 (285)
T ss_dssp HHHHHHHCCSEECCCBEEESGGG
T ss_pred HHHHHHhcccccCccccCCchHh
Confidence 12234444577788887777765
No 312
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.94 E-value=8.3e-26 Score=259.01 Aligned_cols=250 Identities=20% Similarity=0.148 Sum_probs=209.3
Q ss_pred ceEEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhhcCccccccccc
Q 002899 54 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSI 132 (869)
Q Consensus 54 ~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 132 (869)
.+++.|++++|++++. | .+..+++|++|+|++|.|++.. +..+ +|++|+|++|++++. + ++++++|++|+|
T Consensus 42 ~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~~---~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L 113 (457)
T 3bz5_A 42 ATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTLD---LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNC 113 (457)
T ss_dssp TTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCCC---CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEEC
T ss_pred CCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeEc---cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEEC
Confidence 4689999999999964 5 7999999999999999999863 5555 899999999999975 3 889999999999
Q ss_pred cccccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcCCCC
Q 002899 133 EGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGP 212 (869)
Q Consensus 133 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 212 (869)
++|++++ ++ +..+++|++|++++|++++. .+..+++|++|++++|+..+.+ .+..+++|+.|++++|++++.
T Consensus 114 ~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~l 185 (457)
T 3bz5_A 114 DTNKLTK-LD--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITEL 185 (457)
T ss_dssp CSSCCSC-CC--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCCC
T ss_pred CCCcCCe-ec--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCcccee
Confidence 9999996 44 88999999999999999964 3888999999999999655555 478899999999999999974
Q ss_pred chHhhhcCCCCCEEEcCCCCCCCCcccccccccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCCCchhhhcCC
Q 002899 213 IPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLA 292 (869)
Q Consensus 213 ~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 292 (869)
| +..+++|+.|++++|.++..++. ...+|+.|+|++|+|++ +| ++.+++|+.|+|++|++++..+..+..+.
T Consensus 186 -~--l~~l~~L~~L~l~~N~l~~~~l~--~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~L~ 257 (457)
T 3bz5_A 186 -D--VSQNKLLNRLNCDTNNITKLDLN--QNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTLSKLT 257 (457)
T ss_dssp -C--CTTCTTCCEEECCSSCCSCCCCT--TCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTCTTCC
T ss_pred -c--cccCCCCCEEECcCCcCCeeccc--cCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHCCCCC
Confidence 4 88899999999999999887433 33489999999999997 45 78899999999999999987766666555
Q ss_pred -------CCCEEEeeCCcCCCCCchhhhccCCceeeeccCcc
Q 002899 293 -------KTNFMYLTGNKLTGPVPKYIFNSNKNVDISLNNFT 327 (869)
Q Consensus 293 -------~L~~L~Ls~N~l~~~~p~~~~~~l~~l~ls~N~~~ 327 (869)
+|+.|++++|++.+.+|..-+..++.|++++|.+.
T Consensus 258 ~L~l~~n~L~~L~l~~n~~~~~~~~~~l~~L~~L~Ls~n~~l 299 (457)
T 3bz5_A 258 TLHCIQTDLLEIDLTHNTQLIYFQAEGCRKIKELDVTHNTQL 299 (457)
T ss_dssp EEECTTCCCSCCCCTTCTTCCEEECTTCTTCCCCCCTTCTTC
T ss_pred EEeccCCCCCEEECCCCccCCcccccccccCCEEECCCCccc
Confidence 56677777777777777666678888999888654
No 313
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.93 E-value=4.9e-26 Score=269.01 Aligned_cols=266 Identities=18% Similarity=0.196 Sum_probs=228.4
Q ss_pred EEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhhcCccccccccccccc
Q 002899 58 TIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNL 136 (869)
Q Consensus 58 ~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 136 (869)
.+++++.+++ .+|..+. ++|+.|+|++|.|+++.+..|..+ +|++|+|++|+++++.+..|.++++|++|+|++|+
T Consensus 11 ~~~c~~~~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~ 87 (570)
T 2z63_A 11 TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87 (570)
T ss_dssp EEECCSSCCS-SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred EEEeCCCCcc-ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCc
Confidence 4777788888 5676654 579999999999999999888888 89999999999999889999999999999999999
Q ss_pred cCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCC-CCccccCCCCcccEEEccCCcCCCCchH
Q 002899 137 FTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSG-KIPEFIGKWKKIQKLHIQGSSLEGPIPA 215 (869)
Q Consensus 137 l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 215 (869)
+++..|..|.++++|++|+|++|++++..+..++++++|++|+|++|.+++ .+|..|+++++|++|++++|.+++..+.
T Consensus 88 l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~ 167 (570)
T 2z63_A 88 IQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 167 (570)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGG
T ss_pred CCccCHhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHH
Confidence 998888899999999999999999997666679999999999999999987 3699999999999999999999988888
Q ss_pred hhhcCCCC----CEEEcCCCCCCCCcccccccccceEEEcccc-------------------------------------
Q 002899 216 SISALTSL----TDLRISDLKGSESAFPKLDKMNLKTLILTKC------------------------------------- 254 (869)
Q Consensus 216 ~l~~l~~L----~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N------------------------------------- 254 (869)
.+..+++| +.|++++|.+.......+...+|+.|+|++|
T Consensus 168 ~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~ 247 (570)
T 2z63_A 168 DLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFD 247 (570)
T ss_dssp GGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECC
T ss_pred HccchhccchhhhhcccCCCCceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcc
Confidence 89888888 8999999999887777666667888877776
Q ss_pred ---------------------cCccCCCcccCCCCCcCEEeccCCCCCCCCchhhhcCCCCCEEEeeCCcCCCCCchhhh
Q 002899 255 ---------------------LIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIF 313 (869)
Q Consensus 255 ---------------------~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 313 (869)
.+.+..|..+..+++|+.|++++|.++ .+|..+..+ +|+.|++++|+++ .+|...+
T Consensus 248 ~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~l~~~~l 324 (570)
T 2z63_A 248 KSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-QFPTLKL 324 (570)
T ss_dssp TTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-SCCBCBC
T ss_pred hhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc-ccCcccc
Confidence 444556677777888888888888888 577777777 8888888888887 6666667
Q ss_pred ccCCceeeeccCccCC
Q 002899 314 NSNKNVDISLNNFTWE 329 (869)
Q Consensus 314 ~~l~~l~ls~N~~~~~ 329 (869)
..++.|++++|.+...
T Consensus 325 ~~L~~L~l~~n~~~~~ 340 (570)
T 2z63_A 325 KSLKRLTFTSNKGGNA 340 (570)
T ss_dssp SSCCEEEEESCBSCCB
T ss_pred cccCEEeCcCCccccc
Confidence 7788888888866543
No 314
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.93 E-value=7.5e-25 Score=251.05 Aligned_cols=252 Identities=19% Similarity=0.087 Sum_probs=196.5
Q ss_pred ceEEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhhcCccccccccc
Q 002899 54 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSI 132 (869)
Q Consensus 54 ~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 132 (869)
.+++.|+|++|++++. | +..+++|++|+|++|.|++.. +..+ +|++|+|++|++++. + ++.+++|++|+|
T Consensus 64 ~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~~---~~~l~~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l 134 (457)
T 3bz5_A 64 TGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNLD---VTPLTKLTYLNCDTNKLTKL-D--VSQNPLLTYLNC 134 (457)
T ss_dssp TTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCCC---CTTCTTCCEEECCSSCCSCC-C--CTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCceee---cCCCCcCCEEECCCCcCCee-c--CCCCCcCCEEEC
Confidence 4689999999999974 4 899999999999999999863 5555 899999999999975 3 889999999999
Q ss_pred cccccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcCCCC
Q 002899 133 EGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGP 212 (869)
Q Consensus 133 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 212 (869)
++|++++. + +..+++|++|++++|+..+.+ .+..+++|++|+|++|++++. | +..+++|+.|++++|++++.
T Consensus 135 ~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~l-~--l~~l~~L~~L~l~~N~l~~~ 206 (457)
T 3bz5_A 135 ARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITEL-D--VSQNKLLNRLNCDTNNITKL 206 (457)
T ss_dssp TTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCCC-C--CTTCTTCCEEECCSSCCSCC
T ss_pred CCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCcccee-c--cccCCCCCEEECcCCcCCee
Confidence 99999964 3 788899999999999655555 477888999999999999863 4 78888999999999998865
Q ss_pred chHhhhcCCCCCEEEcCCCCCCCCcccccccccceEEEcccccCccCCCcccCCCC-------CcCEEeccCCCCCCCCc
Q 002899 213 IPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMT-------KLKNIDLSFNNLTGGIP 285 (869)
Q Consensus 213 ~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~-------~L~~L~Ls~N~l~~~~p 285 (869)
.+..+++|+.|+|++|+++..+ .....+|+.|+|++|++++..+..+..+. +|+.|++++|.+.+.+|
T Consensus 207 ---~l~~l~~L~~L~Ls~N~l~~ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~ 281 (457)
T 3bz5_A 207 ---DLNQNIQLTFLDCSSNKLTEID--VTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ 281 (457)
T ss_dssp ---CCTTCTTCSEEECCSSCCSCCC--CTTCTTCSEEECCSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE
T ss_pred ---ccccCCCCCEEECcCCcccccC--ccccCCCCEEEeeCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCCccc
Confidence 3788889999999999888865 33334788999999988887655555544 45566666666655555
Q ss_pred hhhhcCCCCCEEEeeCCcCCCCCchhh----------hccCCceeeeccCccCC
Q 002899 286 TTFEKLAKTNFMYLTGNKLTGPVPKYI----------FNSNKNVDISLNNFTWE 329 (869)
Q Consensus 286 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~----------~~~l~~l~ls~N~~~~~ 329 (869)
+..+++|+.|+|++|++.+.+|... .+.++.|++++|++++.
T Consensus 282 --~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~l 333 (457)
T 3bz5_A 282 --AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTEL 333 (457)
T ss_dssp --CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCSCC
T ss_pred --ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCccccc
Confidence 4567778888888887766666432 23566777777777765
No 315
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.92 E-value=3e-26 Score=250.18 Aligned_cols=239 Identities=21% Similarity=0.187 Sum_probs=204.5
Q ss_pred CCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhhcCccccccccccccccCCCCCccccCCCCccEEEee
Q 002899 79 YLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILS 157 (869)
Q Consensus 79 ~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 157 (869)
.++.++++.+.+...+...+... +|++|+|++|++++..|..|..+++|++|+|++|++++..+ +..+++|++|+|+
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 45667788888876666777666 89999999999999999999999999999999999996554 9999999999999
Q ss_pred cccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcCCCCchHhhhcCCCCCEEEcCCCCCCCCc
Q 002899 158 SNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESA 237 (869)
Q Consensus 158 ~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~ 237 (869)
+|+|++.. ..++|++|++++|++++..+.. +++|+.|+|++|++++..+..+..+++|+.|+|++|.++...
T Consensus 89 ~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 160 (317)
T 3o53_A 89 NNYVQELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVN 160 (317)
T ss_dssp SSEEEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEE
T ss_pred CCcccccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCccc
Confidence 99998432 3489999999999999766554 678999999999999888889999999999999999999877
Q ss_pred ccccc--cccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCCCchhhhcCCCCCEEEeeCCcCCCCCchhh--h
Q 002899 238 FPKLD--KMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYI--F 313 (869)
Q Consensus 238 ~~~~~--~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~--~ 313 (869)
+..+. ..+|+.|+|++|.|++..+ ...+++|+.|+|++|+|++. |..+..+++|+.|+|++|+|+ .+|..+ .
T Consensus 161 ~~~~~~~l~~L~~L~L~~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l 236 (317)
T 3o53_A 161 FAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLV-LIEKALRFS 236 (317)
T ss_dssp GGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCC-EECTTCCCC
T ss_pred HHHHhhccCcCCEEECCCCcCccccc--ccccccCCEEECCCCcCCcc-hhhhcccCcccEEECcCCccc-chhhHhhcC
Confidence 66553 3589999999999997633 33589999999999999965 455999999999999999999 467666 5
Q ss_pred ccCCceeeeccCccCCCCCCCCCCCC
Q 002899 314 NSNKNVDISLNNFTWESSDPIECPRG 339 (869)
Q Consensus 314 ~~l~~l~ls~N~~~~~~~~p~~C~c~ 339 (869)
..++.|++++| +|.|+|.
T Consensus 237 ~~L~~L~l~~N--------~~~~~~~ 254 (317)
T 3o53_A 237 QNLEHFDLRGN--------GFHCGTL 254 (317)
T ss_dssp TTCCEEECTTC--------CCBHHHH
T ss_pred CCCCEEEccCC--------CccCcCH
Confidence 68899999999 7777753
No 316
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.92 E-value=4.7e-25 Score=260.48 Aligned_cols=263 Identities=25% Similarity=0.296 Sum_probs=164.9
Q ss_pred CCCCCCCCCCCCCCCccccCCCCCCCCcceEecCCCCcceEEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCc
Q 002899 16 KDWNFGVDPCSQKGNWELSSDDKKGFESNVTCDCSSATCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFS 95 (869)
Q Consensus 16 ~~W~~~~d~C~~~g~w~~~~~~~~~~~~~v~C~~~~~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~ 95 (869)
+.|....+||.|+|..+ .+...|.|. ...++.|+|++|+|+ .+|..+. ++|+.|+|++|.|+.+++
T Consensus 13 ~~W~~~~~~~~~~~r~~---------~~~~~~~c~--~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~lp~ 78 (622)
T 3g06_A 13 SAWRRAAPAEESRGRAA---------VVQKMRACL--NNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTSLPA 78 (622)
T ss_dssp HHHHHTCCGGGHHHHHH---------HHHHHHHHH--HHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCSCCCC
T ss_pred HHHHhcCCcchhccccc---------cCccccccc--CCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCCCCCC
Confidence 34766677776543221 122334443 234889999999998 7787776 799999999999986655
Q ss_pred hhhccccceEEEeecccCCCCCchhhcCccccccccccccccCCCCCccccCCCCccEEEeecccccccCCccccCCCCC
Q 002899 96 PQWASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNL 175 (869)
Q Consensus 96 ~~~~~l~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L 175 (869)
...+|++|+|++|+|+++ |. .+++|++|+|++|+|++ +|. .+++|++|+|++|+|+. +|.. +++|
T Consensus 79 ---~l~~L~~L~Ls~N~l~~l-p~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L 143 (622)
T 3g06_A 79 ---LPPELRTLEVSGNQLTSL-PV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGL 143 (622)
T ss_dssp ---CCTTCCEEEECSCCCSCC-CC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTC
T ss_pred ---cCCCCCEEEcCCCcCCcC-CC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCC
Confidence 234899999999999854 43 67899999999999985 444 56788888999888884 5543 4788
Q ss_pred CeEeccCCcCCCCCccccCCCCcccEEEccCCcCCCCchHhhhcCCCCCEEEcCCCCCCCCcccccccccceEEEccccc
Q 002899 176 NDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCL 255 (869)
Q Consensus 176 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~ 255 (869)
++|+|++|++++ +|. .+++|+.|+|++|.|++ +| ..+++|+.|+|++|.++..+.. ..+|+.|++++|.
T Consensus 144 ~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~l~~~---~~~L~~L~L~~N~ 212 (622)
T 3g06_A 144 QELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLASLPTL---PSELYKLWAYNNR 212 (622)
T ss_dssp CEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSCCCCC---CTTCCEEECCSSC
T ss_pred CEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCCCCCc---cchhhEEECcCCc
Confidence 888888888875 333 23566666666666664 23 3456666666666666553321 1245555555555
Q ss_pred CccCCCcccCCCCCcCEEeccCCCCCCCCchhhhcCCCCCEEEeeCCcCCCCCchhhhccCCceeeeccCccC
Q 002899 256 IHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFNSNKNVDISLNNFTW 328 (869)
Q Consensus 256 i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~l~ls~N~~~~ 328 (869)
|+. +|. .+++|+.|+|++|+|++ +| ..+++|+.|+|++|+|+ .+|. ....++.|+|++|+++.
T Consensus 213 l~~-l~~---~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~-~~~~L~~L~Ls~N~L~~ 275 (622)
T 3g06_A 213 LTS-LPA---LPSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM-LPSGLLSLSVYRNQLTR 275 (622)
T ss_dssp CSS-CCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC-CCTTCCEEECCSSCCCS
T ss_pred ccc-cCC---CCCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc-ccccCcEEeCCCCCCCc
Confidence 552 222 13455555555555553 33 33445555555555555 2333 33445555555555553
No 317
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.92 E-value=5.3e-26 Score=262.93 Aligned_cols=235 Identities=16% Similarity=0.109 Sum_probs=208.6
Q ss_pred cceEEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhhcCcccccccc
Q 002899 53 TCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLS 131 (869)
Q Consensus 53 ~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 131 (869)
..+++.|+|++|++++..|..|..+++|++|+|++|.|++.++ +..+ +|++|+|++|.|++..+ .++|++|+
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~ 105 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLH 105 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEE
T ss_pred CCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEE
Confidence 4479999999999999888999999999999999999998776 6666 89999999999986543 38999999
Q ss_pred ccccccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccC-CCCcccEEEccCCcCC
Q 002899 132 IEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIG-KWKKIQKLHIQGSSLE 210 (869)
Q Consensus 132 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~L~~N~l~ 210 (869)
|++|.|++..+. .+++|++|+|++|.|++..|..+..+++|++|+|++|.|++..|..+. .+++|+.|+|++|.|+
T Consensus 106 L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~ 182 (487)
T 3oja_A 106 AANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY 182 (487)
T ss_dssp CCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCC
T ss_pred CcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccc
Confidence 999999976554 468899999999999998898999999999999999999998888876 7999999999999999
Q ss_pred CCchHhhhcCCCCCEEEcCCCCCCCCcccccccccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCC-CCCchhhh
Q 002899 211 GPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLT-GGIPTTFE 289 (869)
Q Consensus 211 ~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~ 289 (869)
+..+ +..+++|+.|+|++|.++..+.......+|+.|+|++|.|++ +|..+..+++|+.|+|++|.+. +.+|..+.
T Consensus 183 ~~~~--~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~ 259 (487)
T 3oja_A 183 DVKG--QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFS 259 (487)
T ss_dssp EEEC--CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHT
T ss_pred cccc--cccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHH
Confidence 7633 446999999999999999877665556689999999999996 6777899999999999999998 77888899
Q ss_pred cCCCCCEEEee
Q 002899 290 KLAKTNFMYLT 300 (869)
Q Consensus 290 ~l~~L~~L~Ls 300 (869)
.+++|+.|+++
T Consensus 260 ~l~~L~~l~~~ 270 (487)
T 3oja_A 260 KNQRVQTVAKQ 270 (487)
T ss_dssp TCHHHHHHHHH
T ss_pred hCCCCcEEecc
Confidence 99999888886
No 318
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.92 E-value=6.4e-25 Score=251.43 Aligned_cols=250 Identities=20% Similarity=0.236 Sum_probs=112.2
Q ss_pred ceEEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-c-------------ceEEEeecccCCCCCch
Q 002899 54 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-Q-------------LVELSVMGNRLSGPFPK 119 (869)
Q Consensus 54 ~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~-------------L~~L~Ls~N~l~~~~~~ 119 (869)
.+++.|++++|++ +.+|++|+++++|++|+|++|.+++..|..+..+ + +++|++++|++++.. .
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~lp-~ 88 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSLP-E 88 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCCC-S
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccCC-C
Confidence 4577788888888 6778888888888888888887777777666654 2 366777777766432 2
Q ss_pred hhcCccccccccccccccCCCCCcccc----------------CC-CCccEEEeecccccccCCccccCCCCCCeEeccC
Q 002899 120 VLTNITTLKNLSIEGNLFTGSIPPDIR----------------KL-INLQKLILSSNSFTGELPAELTKLTNLNDLRISD 182 (869)
Q Consensus 120 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~----------------~l-~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~ 182 (869)
-.++|++|+|++|.+++ +|..+. .+ ++|++|+|++|++++ +| .|.++++|++|++++
T Consensus 89 ---~~~~L~~L~l~~n~l~~-lp~~~~~L~~L~l~~n~l~~l~~~~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~ 162 (454)
T 1jl5_A 89 ---LPPHLESLVASCNSLTE-LPELPQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDN 162 (454)
T ss_dssp ---CCTTCSEEECCSSCCSS-CCCCCTTCCEEECCSSCCSCCCSCCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCS
T ss_pred ---CcCCCCEEEccCCcCCc-cccccCCCcEEECCCCccCcccCCCCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCC
Confidence 12456666666666664 343210 01 344444444444443 33 344445555555555
Q ss_pred CcCCCCCccccCCCCcccEEEccCCcCCCCchHhhhcCCCCCEEEcCCCCCCCCcccccccccceEEEcccccCccCCCc
Q 002899 183 NNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPD 262 (869)
Q Consensus 183 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~ 262 (869)
|++++ +|..+ ++|++|++++|++++ +| .+.++++|+.|++++|.++..+... .+|+.|++++|.++ .+|.
T Consensus 163 N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~l~~~~---~~L~~L~l~~n~l~-~lp~ 232 (454)
T 1jl5_A 163 NSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKKLPDLP---LSLESIVAGNNILE-ELPE 232 (454)
T ss_dssp SCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSSCCCCC---TTCCEEECCSSCCS-SCCC
T ss_pred CcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCcCCCCc---CcccEEECcCCcCC-cccc
Confidence 55443 23221 244555555555543 22 3455555555555555544322110 24555555555554 3332
Q ss_pred ccCCCCCcCEEeccCCCCCCCCchhhhcCCCCCEEEeeCCcCCCCCchhhhccCCceeeeccCccC
Q 002899 263 YIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFNSNKNVDISLNNFTW 328 (869)
Q Consensus 263 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~l~ls~N~~~~ 328 (869)
++.+++|+.|+|++|++++ +|. .+++|+.|++++|++++ +|.. ...++.|++++|.++.
T Consensus 233 -~~~l~~L~~L~l~~N~l~~-l~~---~~~~L~~L~l~~N~l~~-l~~~-~~~L~~L~ls~N~l~~ 291 (454)
T 1jl5_A 233 -LQNLPFLTTIYADNNLLKT-LPD---LPPSLEALNVRDNYLTD-LPEL-PQSLTFLDVSENIFSG 291 (454)
T ss_dssp -CTTCTTCCEEECCSSCCSS-CCS---CCTTCCEEECCSSCCSC-CCCC-CTTCCEEECCSSCCSE
T ss_pred -cCCCCCCCEEECCCCcCCc-ccc---cccccCEEECCCCcccc-cCcc-cCcCCEEECcCCccCc
Confidence 4455555555555555553 222 12445555555555553 3322 2445555555555444
No 319
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.91 E-value=3.6e-25 Score=258.27 Aligned_cols=184 Identities=18% Similarity=0.210 Sum_probs=145.4
Q ss_pred CCCCeeeccCceEEEEEEEcCCcEEEEEEecccCc--------hhhHHHHHHHHHHHhcCCCceeeEEeEEeeCceEEEE
Q 002899 641 DPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSR--------QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLV 712 (869)
Q Consensus 641 ~~~~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~~--------~~~~~f~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 712 (869)
...++||+|+||.||+|.. .++.+++|+...... ...++|.+|++++++++||||+++..++...+..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 3467899999999999954 467888887644321 1134589999999999999999776676777888999
Q ss_pred EEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceee
Q 002899 713 YEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 792 (869)
Q Consensus 713 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~ 792 (869)
|||+++++|.+++.. +..++.|+++||+|||+++ |+||||||+|||++. .+||+|||+++..
T Consensus 418 mE~~~ggsL~~~l~~-------------~~~i~~qi~~aL~~LH~~g---IiHrDiKp~NILl~~--~~kL~DFGla~~~ 479 (540)
T 3en9_A 418 MSYINGKLAKDVIED-------------NLDIAYKIGEIVGKLHKND---VIHNDLTTSNFIFDK--DLYIIDFGLGKIS 479 (540)
T ss_dssp EECCCSEEHHHHSTT-------------CTHHHHHHHHHHHHHHHTT---EECTTCCTTSEEESS--SEEECCCTTCEEC
T ss_pred EECCCCCCHHHHHHH-------------HHHHHHHHHHHHHHHHHCc---CccCCCCHHHEEECC--eEEEEECccCEEC
Confidence 999999999998854 5689999999999999998 999999999999998 9999999999987
Q ss_pred cCCCccc------cccccccccccchhhccc--CCCCchhHHHHHHHHHHHHHcCCCCC
Q 002899 793 EEDKTHI------STRIAGTIGYMAPEYAMR--GYLTSKADVYSFGVVTLEIVSGKSNT 843 (869)
Q Consensus 793 ~~~~~~~------~~~~~gt~~y~aPE~~~~--~~~~~k~DvwSlGvil~elltG~~p~ 843 (869)
....... .....||+.|||||++.. ..|+..+|+|+..+-..+.+.++.++
T Consensus 480 ~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 480 NLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp CCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred CCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 6432211 234679999999999976 56788899999999999988888766
No 320
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.91 E-value=2.4e-26 Score=252.94 Aligned_cols=287 Identities=18% Similarity=0.257 Sum_probs=194.7
Q ss_pred CcHHHHHHHHHHhCCCCCCCCCCCCCCCCCccccCCCCCCCCcceEecCCCCcceEEEEeccCCCccccCCccccCC--C
Q 002899 1 MPKKALKQIGRKLGKKDWNFGVDPCSQKGNWELSSDDKKGFESNVTCDCSSATCHVVTIALKAQNLTGTLPTELSKL--R 78 (869)
Q Consensus 1 ~~~~~l~~~~~~l~~~~W~~~~d~C~~~g~w~~~~~~~~~~~~~v~C~~~~~~~~v~~L~l~~~~l~~~~p~~l~~l--~ 78 (869)
+|.+.|.+|+++++..+......+|. .|. .+.|+. ..++.|+++++.+. +..+..+ +
T Consensus 12 LP~eil~~If~~L~~~d~~~~~~vc~---~W~-----------~~~~~~----~~~~~l~l~~~~~~---~~~~~~~~~~ 70 (336)
T 2ast_B 12 LPDELLLGIFSCLCLPELLKVSGVCK---RWY-----------RLASDE----SLWQTLDLTGKNLH---PDVTGRLLSQ 70 (336)
T ss_dssp SCHHHHHHHHTTSCHHHHHHTTSSCH---HHH-----------HHHTCS----TTSSEEECTTCBCC---HHHHHHHHHT
T ss_pred CCHHHHHHHHHhCCHHHHHHHHHHHH---HHH-----------HHhcCc----hhheeeccccccCC---HHHHHhhhhc
Confidence 69999999999999876555566775 365 233331 13567888888777 4566666 7
Q ss_pred CCCEEEeecCcCCCCCchhhccccceEEEeecccCCCC-CchhhcCccccccccccccccCCCCCccccCCCCccEEEee
Q 002899 79 YLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGP-FPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILS 157 (869)
Q Consensus 79 ~L~~L~Ls~N~i~~~~~~~~~~l~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 157 (869)
+|+.|+|++|.+++..+..+...+|++|+|++|.+++. ++..+..+++|++|+|++|.+++..+..+..+++|++|+|+
T Consensus 71 ~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~ 150 (336)
T 2ast_B 71 GVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLS 150 (336)
T ss_dssp TCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECT
T ss_pred cceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECC
Confidence 88889998888888777766555788888888887755 66777778888888888888776667777778888888888
Q ss_pred cc-ccccc-CCccccCCCCCCeEeccCC-cCCCC-CccccCCCC-cccEEEccCC--cCC-CCchHhhhcCCCCCEEEcC
Q 002899 158 SN-SFTGE-LPAELTKLTNLNDLRISDN-NFSGK-IPEFIGKWK-KIQKLHIQGS--SLE-GPIPASISALTSLTDLRIS 229 (869)
Q Consensus 158 ~N-~i~~~-~p~~~~~l~~L~~L~Ls~N-~l~~~-~~~~~~~l~-~L~~L~L~~N--~l~-~~~~~~l~~l~~L~~L~L~ 229 (869)
+| .+++. ++..+.++++|++|+|++| .+++. ++..+..++ +|++|+|++| .++ +.++..+..+++|+.|+|+
T Consensus 151 ~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~ 230 (336)
T 2ast_B 151 GCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLS 230 (336)
T ss_dssp TCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECT
T ss_pred CCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCC
Confidence 87 56652 5555677778888888888 77643 456677777 7888888777 444 3456666777777777666
Q ss_pred CCCCCCCcccccccccceEEEcccccCccCCCcccCCCCCcCEEeccCCC-CCCCCchhhhcCCCCCEEEeeCCcCCCCC
Q 002899 230 DLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNN-LTGGIPTTFEKLAKTNFMYLTGNKLTGPV 308 (869)
Q Consensus 230 ~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 308 (869)
+|.. +++..+..+..+++|+.|+|++|. +.......+..+++|+.|+|++| ++...
T Consensus 231 ~~~~----------------------l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~~~~ 287 (336)
T 2ast_B 231 DSVM----------------------LKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VPDGT 287 (336)
T ss_dssp TCTT----------------------CCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SCTTC
T ss_pred CCCc----------------------CCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cCHHH
Confidence 5541 444445555666777777777774 22111124666777777777776 43333
Q ss_pred chhhhccCCceeeeccCccCCCC
Q 002899 309 PKYIFNSNKNVDISLNNFTWESS 331 (869)
Q Consensus 309 p~~~~~~l~~l~ls~N~~~~~~~ 331 (869)
-..+...++.|+++.|+++...+
T Consensus 288 ~~~l~~~l~~L~l~~n~l~~~~~ 310 (336)
T 2ast_B 288 LQLLKEALPHLQINCSHFTTIAR 310 (336)
T ss_dssp HHHHHHHSTTSEESCCCSCCTTC
T ss_pred HHHHHhhCcceEEecccCccccC
Confidence 23333456667777776665544
No 321
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.91 E-value=2.3e-24 Score=230.27 Aligned_cols=208 Identities=20% Similarity=0.201 Sum_probs=180.7
Q ss_pred cceEEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhhcCcccccccc
Q 002899 53 TCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLS 131 (869)
Q Consensus 53 ~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 131 (869)
..+++.|++++|++++..+..|.++++|++|+|++|.+++..+..|..+ +|++|+|++|++++..+..|.++++|++|+
T Consensus 27 ~~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (276)
T 2z62_A 27 PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (276)
T ss_dssp CTTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred CCCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEE
Confidence 3469999999999998888899999999999999999999888888887 899999999999999889999999999999
Q ss_pred ccccccCCCCCccccCCCCccEEEeeccccccc-CCccccCCCCCCeEeccCCcCCCCCccccCCCCccc----EEEccC
Q 002899 132 IEGNLFTGSIPPDIRKLINLQKLILSSNSFTGE-LPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQ----KLHIQG 206 (869)
Q Consensus 132 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~----~L~L~~ 206 (869)
|++|++++..+..+..+++|++|+|++|++++. +|..+.++++|++|+|++|++++..+..|..+++|+ .|++++
T Consensus 107 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~ 186 (276)
T 2z62_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 186 (276)
T ss_dssp CTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCS
T ss_pred CCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCC
Confidence 999999987777899999999999999999874 689999999999999999999988888887777776 666677
Q ss_pred CcCCCCchHhhhcCCCCCEEEcCCCCCCCCcccccccccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCCC
Q 002899 207 SSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGI 284 (869)
Q Consensus 207 N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 284 (869)
|.+++..+. .+...+|+.|+|++|+|++..+..|..+++|+.|+|++|++++..
T Consensus 187 n~l~~~~~~------------------------~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 240 (276)
T 2z62_A 187 NPMNFIQPG------------------------AFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 240 (276)
T ss_dssp SCCCEECTT------------------------SSCSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCT
T ss_pred CcccccCcc------------------------ccCCCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccC
Confidence 666643333 222336777777888888887788899999999999999999644
No 322
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.91 E-value=1.3e-23 Score=240.57 Aligned_cols=241 Identities=23% Similarity=0.295 Sum_probs=143.3
Q ss_pred eEEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccccceEEEeecccCCCCCchhhcCccccccccccc
Q 002899 55 HVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIEG 134 (869)
Q Consensus 55 ~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 134 (869)
+++.|++++|.+++ +| +|.++++|++|+|++|++++.+. .+ .+|++|+|++|++++ +| .+.++++|++|+|++
T Consensus 132 ~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~lp~-~~--~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~ 204 (454)
T 1jl5_A 132 LLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKKLPD-LP--PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADN 204 (454)
T ss_dssp TCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSCCCC-CC--TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCS
T ss_pred CCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcccCC-Cc--ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCC
Confidence 46666666666664 45 46666666666666666665322 11 266666666666665 33 466666666677766
Q ss_pred cccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcCCCCch
Q 002899 135 NLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIP 214 (869)
Q Consensus 135 N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 214 (869)
|++++ +|... ++|++|++++|+++ .+| .+..+++|++|++++|++++ +|.. +++|+.|++++|++++ +|
T Consensus 205 N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~ 273 (454)
T 1jl5_A 205 NSLKK-LPDLP---LSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LP 273 (454)
T ss_dssp SCCSS-CCCCC---TTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CC
T ss_pred CcCCc-CCCCc---CcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cC
Confidence 66664 33222 36666666666666 455 36666677777777776664 3332 3566666666666664 22
Q ss_pred HhhhcCCCCCEEEcCCCCCCCCcccccccccceEEEcccccCccCCCcccCCC-CCcCEEeccCCCCCCCCchhhhcCCC
Q 002899 215 ASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDM-TKLKNIDLSFNNLTGGIPTTFEKLAK 293 (869)
Q Consensus 215 ~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~ 293 (869)
.. +++|+.|++++|.++..+.. ..+|+.|++++|++++. ..+ ++|+.|+|++|++++ +|.. +++
T Consensus 274 ~~---~~~L~~L~ls~N~l~~l~~~---~~~L~~L~l~~N~l~~i-----~~~~~~L~~L~Ls~N~l~~-lp~~---~~~ 338 (454)
T 1jl5_A 274 EL---PQSLTFLDVSENIFSGLSEL---PPNLYYLNASSNEIRSL-----CDLPPSLEELNVSNNKLIE-LPAL---PPR 338 (454)
T ss_dssp CC---CTTCCEEECCSSCCSEESCC---CTTCCEEECCSSCCSEE-----CCCCTTCCEEECCSSCCSC-CCCC---CTT
T ss_pred cc---cCcCCEEECcCCccCcccCc---CCcCCEEECcCCcCCcc-----cCCcCcCCEEECCCCcccc-cccc---CCc
Confidence 21 25666666666666542210 12555666666655531 122 467777777777775 4432 467
Q ss_pred CCEEEeeCCcCCCCCchhhhccCCceeeeccCccCCC
Q 002899 294 TNFMYLTGNKLTGPVPKYIFNSNKNVDISLNNFTWES 330 (869)
Q Consensus 294 L~~L~Ls~N~l~~~~p~~~~~~l~~l~ls~N~~~~~~ 330 (869)
|+.|+|++|++++ +|. ....++.|++++|+++..+
T Consensus 339 L~~L~L~~N~l~~-lp~-~l~~L~~L~L~~N~l~~l~ 373 (454)
T 1jl5_A 339 LERLIASFNHLAE-VPE-LPQNLKQLHVEYNPLREFP 373 (454)
T ss_dssp CCEEECCSSCCSC-CCC-CCTTCCEEECCSSCCSSCC
T ss_pred CCEEECCCCcccc-ccc-hhhhccEEECCCCCCCcCC
Confidence 7777777777773 555 5566777777777776643
No 323
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.91 E-value=4.5e-24 Score=224.76 Aligned_cols=174 Identities=21% Similarity=0.285 Sum_probs=109.5
Q ss_pred ccccccccccccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEcc
Q 002899 126 TLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQ 205 (869)
Q Consensus 126 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 205 (869)
+|+.|+|++|.+++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|+
T Consensus 36 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 115 (251)
T 3m19_A 36 DTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLG 115 (251)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcC
Confidence 45555555555554444455555555555555555554444455555555555555555555555555555555555555
Q ss_pred CCcCCCCchHhhhcCCCCCEEEcCCCCCCCCcccccccccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCCCc
Q 002899 206 GSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIP 285 (869)
Q Consensus 206 ~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 285 (869)
+|+|++..+..|..+++|+.|+| ++|+|++..+..|..+++|+.|+|++|+|++..+
T Consensus 116 ~N~l~~~~~~~~~~l~~L~~L~L-----------------------s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 172 (251)
T 3m19_A 116 GNQLKSLPSGVFDRLTKLKELRL-----------------------NTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPH 172 (251)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEEC-----------------------CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CCcCCCcChhHhccCCcccEEEC-----------------------cCCcCCccCHHHcCcCcCCCEEECCCCcCCccCH
Confidence 55555444444555554444443 3555555556667778888888888888887777
Q ss_pred hhhhcCCCCCEEEeeCCcCCCCCchhhhccCCceeeeccCccCCCCCCCCCC-CCCccceeccCCCCC
Q 002899 286 TTFEKLAKTNFMYLTGNKLTGPVPKYIFNSNKNVDISLNNFTWESSDPIECP-RGSVNLVESYSSPRN 352 (869)
Q Consensus 286 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~l~ls~N~~~~~~~~p~~C~-c~~~~~~~~l~~~~~ 352 (869)
..|..+++|+.|+|++| ||.|+ |.+.++..|+.....
T Consensus 173 ~~~~~l~~L~~L~l~~N------------------------------~~~c~~~~~~~l~~~~~~~~~ 210 (251)
T 3m19_A 173 GAFDRLGKLQTITLFGN------------------------------QFDCSRCEILYLSQWIRENSN 210 (251)
T ss_dssp TTTTTCTTCCEEECCSC------------------------------CBCTTSTTHHHHHHHHHHSGG
T ss_pred HHHhCCCCCCEEEeeCC------------------------------ceeCCccccHHHHHHHHhccc
Confidence 77888888888888888 67798 899999999875443
No 324
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.91 E-value=2e-26 Score=264.93 Aligned_cols=274 Identities=19% Similarity=0.217 Sum_probs=218.9
Q ss_pred eEEEEeccCCCccc----cCCccccCCCCCCEEEeecCcCCCCCchhhcc------ccceEEEeecccCCCCC----chh
Q 002899 55 HVVTIALKAQNLTG----TLPTELSKLRYLKQLDLSRNCLTGSFSPQWAS------LQLVELSVMGNRLSGPF----PKV 120 (869)
Q Consensus 55 ~v~~L~l~~~~l~~----~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~------l~L~~L~Ls~N~l~~~~----~~~ 120 (869)
+++.|+|++|.++. .++..+..+++|++|+|++|.+++..+..+.. .+|++|+|++|++++.. +..
T Consensus 86 ~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 165 (461)
T 1z7x_W 86 KIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASV 165 (461)
T ss_dssp CCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHH
T ss_pred ceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHH
Confidence 68999999999984 56888999999999999999988665544433 16999999999998744 566
Q ss_pred hcCccccccccccccccCCCCCcccc-----CCCCccEEEeeccccccc----CCccccCCCCCCeEeccCCcCCCCC--
Q 002899 121 LTNITTLKNLSIEGNLFTGSIPPDIR-----KLINLQKLILSSNSFTGE----LPAELTKLTNLNDLRISDNNFSGKI-- 189 (869)
Q Consensus 121 ~~~l~~L~~L~Ls~N~l~~~~~~~~~-----~l~~L~~L~Ls~N~i~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~-- 189 (869)
+..+++|++|+|++|.++...+..+. .+++|++|+|++|.+++. ++..+..+++|++|+|++|++++..
T Consensus 166 l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~ 245 (461)
T 1z7x_W 166 LRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMA 245 (461)
T ss_dssp HHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHH
T ss_pred HhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHH
Confidence 77789999999999998855444443 356899999999999863 4667788899999999999987543
Q ss_pred ---ccccCCCCcccEEEccCCcCCCC----chHhhhcCCCCCEEEcCCCCCCCCccccccc------ccceEEEcccccC
Q 002899 190 ---PEFIGKWKKIQKLHIQGSSLEGP----IPASISALTSLTDLRISDLKGSESAFPKLDK------MNLKTLILTKCLI 256 (869)
Q Consensus 190 ---~~~~~~l~~L~~L~L~~N~l~~~----~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~------~~L~~L~Ls~N~i 256 (869)
+..+..+++|++|+|++|.++.. ++..+..+++|+.|+|++|.+.......+.. .+|+.|+|++|.+
T Consensus 246 ~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l 325 (461)
T 1z7x_W 246 ELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSF 325 (461)
T ss_dssp HHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCC
T ss_pred HHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCC
Confidence 33344689999999999999864 5778888999999999999887654433322 3899999999999
Q ss_pred ccC----CCcccCCCCCcCEEeccCCCCCCCCchhhhc-----CCCCCEEEeeCCcCCC----CCchhh--hccCCceee
Q 002899 257 HGE----IPDYIGDMTKLKNIDLSFNNLTGGIPTTFEK-----LAKTNFMYLTGNKLTG----PVPKYI--FNSNKNVDI 321 (869)
Q Consensus 257 ~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~~----~~p~~~--~~~l~~l~l 321 (869)
++. ++..+..+++|+.|+|++|++++..+..+.. .++|+.|+|++|++++ .+|..+ .+.++.|++
T Consensus 326 ~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l 405 (461)
T 1z7x_W 326 TAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDL 405 (461)
T ss_dssp BGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEEC
T ss_pred chHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEEC
Confidence 876 4566777899999999999998766666654 6799999999999986 667666 568899999
Q ss_pred eccCccC
Q 002899 322 SLNNFTW 328 (869)
Q Consensus 322 s~N~~~~ 328 (869)
++|+++.
T Consensus 406 ~~N~i~~ 412 (461)
T 1z7x_W 406 SNNCLGD 412 (461)
T ss_dssp CSSSCCH
T ss_pred CCCCCCH
Confidence 9997763
No 325
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=8.6e-24 Score=220.81 Aligned_cols=204 Identities=17% Similarity=0.163 Sum_probs=125.1
Q ss_pred ccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeeccc-CCCCCchhhcCccccccccccc-cccCCCCC
Q 002899 66 LTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNR-LSGPFPKVLTNITTLKNLSIEG-NLFTGSIP 142 (869)
Q Consensus 66 l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~~ 142 (869)
++ .+|. +. ++|++|+|++|+|+++++..|..+ +|++|+|++|+ ++.+.+..|.++++|++|+|++ |++++..+
T Consensus 23 l~-~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~ 98 (239)
T 2xwt_C 23 IQ-RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDP 98 (239)
T ss_dssp CS-SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECT
T ss_pred cc-ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCH
Confidence 44 4555 43 378888888888776666566555 56666666665 6555555566666666666665 66664444
Q ss_pred ccccCCCCccEEEeecccccccCCccccCCCCCC---eEeccCC-cCCCCCccccCCCCccc-EEEccCCcCCCCchHhh
Q 002899 143 PDIRKLINLQKLILSSNSFTGELPAELTKLTNLN---DLRISDN-NFSGKIPEFIGKWKKIQ-KLHIQGSSLEGPIPASI 217 (869)
Q Consensus 143 ~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~---~L~Ls~N-~l~~~~~~~~~~l~~L~-~L~L~~N~l~~~~~~~l 217 (869)
..|.++++|++|+|++|++++ +|. |..+++|+ +|++++| ++++..+..|.++++|+ .|+|++|+++
T Consensus 99 ~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~------- 169 (239)
T 2xwt_C 99 DALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT------- 169 (239)
T ss_dssp TSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-------
T ss_pred HHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-------
Confidence 555566666666666666653 443 55555555 5555555 55544444455555555 5555555544
Q ss_pred hcCCCCCEEEcCCCCCCCCcccccccccceEEEccccc-CccCCCcccCCC-CCcCEEeccCCCCCCCCchhhhcCCCCC
Q 002899 218 SALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCL-IHGEIPDYIGDM-TKLKNIDLSFNNLTGGIPTTFEKLAKTN 295 (869)
Q Consensus 218 ~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~-i~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 295 (869)
..+...+...+|+.|+|++|+ +++..+..|..+ ++|+.|+|++|+|++..+. .+++|+
T Consensus 170 -----------------~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~ 229 (239)
T 2xwt_C 170 -----------------SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLK 229 (239)
T ss_dssp -----------------EECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCS
T ss_pred -----------------ccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCc
Confidence 333222333356677777774 776777778888 8888888888888854433 567788
Q ss_pred EEEeeCC
Q 002899 296 FMYLTGN 302 (869)
Q Consensus 296 ~L~Ls~N 302 (869)
.|+++++
T Consensus 230 ~L~l~~~ 236 (239)
T 2xwt_C 230 ELIARNT 236 (239)
T ss_dssp EEECTTC
T ss_pred eeeccCc
Confidence 8887766
No 326
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.90 E-value=5.1e-24 Score=227.19 Aligned_cols=195 Identities=19% Similarity=0.293 Sum_probs=108.0
Q ss_pred cceEEEeecccCCCCCchhhcCccccccccccccccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEecc
Q 002899 102 QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRIS 181 (869)
Q Consensus 102 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls 181 (869)
+|+.|++++|.++.. ..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++..+..|.++++|++|+|+
T Consensus 42 ~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 117 (272)
T 3rfs_A 42 SIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLV 117 (272)
T ss_dssp TCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred ceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECC
Confidence 455555555554422 2355666666666666666642 356666666666666666665555556666666666666
Q ss_pred CCcCCCCCccccCCCCcccEEEccCCcCCCCchHhhhcCCCCCEEEcCCCCCCCCcccccccccceEEEcccccCccCCC
Q 002899 182 DNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIP 261 (869)
Q Consensus 182 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p 261 (869)
+|++++..+..|..+++|+.|+|++|.+++..+..+..+++|+.|+|++|++ ++..+
T Consensus 118 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l-----------------------~~~~~ 174 (272)
T 3rfs_A 118 ENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQL-----------------------QSLPE 174 (272)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC-----------------------CCCCT
T ss_pred CCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCc-----------------------CccCH
Confidence 6666666666666666666666666666666565566666666555554333 33333
Q ss_pred cccCCCCCcCEEeccCCCCCCCCchhhhcCCCCCEEEeeCCcCCCCCchhhhccCCceeeeccCccC
Q 002899 262 DYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFNSNKNVDISLNNFTW 328 (869)
Q Consensus 262 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~l~ls~N~~~~ 328 (869)
..|..+++|+.|+|++|++++..|..+..+++|+.|+|++|++++..| .++.++++.|.+++
T Consensus 175 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~-----~l~~l~~~~n~~~g 236 (272)
T 3rfs_A 175 GVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP-----GIRYLSEWINKHSG 236 (272)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT-----TTHHHHHHHHHTGG
T ss_pred HHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc-----HHHHHHHHHHhCCC
Confidence 334444444555555554444444444444455555555554444332 23344444444443
No 327
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=5.2e-23 Score=223.73 Aligned_cols=223 Identities=20% Similarity=0.241 Sum_probs=162.5
Q ss_pred CCCCEEEeecCcCCCCCc----hhhccccceEEEeecccCCCCCchhh--cCccccccccccccccCCCCC----ccccC
Q 002899 78 RYLKQLDLSRNCLTGSFS----PQWASLQLVELSVMGNRLSGPFPKVL--TNITTLKNLSIEGNLFTGSIP----PDIRK 147 (869)
Q Consensus 78 ~~L~~L~Ls~N~i~~~~~----~~~~~l~L~~L~Ls~N~l~~~~~~~~--~~l~~L~~L~Ls~N~l~~~~~----~~~~~ 147 (869)
..++.|.+.++.++.... ..+...+|++|+|++|++++..|..+ ..+++|++|+|++|.+++..+ ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 457888888887763221 11222369999999999998888887 889999999999999987655 34567
Q ss_pred CCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCC--C--ccccCCCCcccEEEccCCcCCCCch--H-hhhcC
Q 002899 148 LINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGK--I--PEFIGKWKKIQKLHIQGSSLEGPIP--A-SISAL 220 (869)
Q Consensus 148 l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~--~~~~~~l~~L~~L~L~~N~l~~~~~--~-~l~~l 220 (869)
+++|++|+|++|++++..+..|..+++|++|+|++|++.+. + +..+..+++|++|+|++|+++...+ . .+..+
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l 223 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAG 223 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHT
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcC
Confidence 88999999999999888888888999999999999987642 2 2334778899999999999973221 1 35788
Q ss_pred CCCCEEEcCCCCCCCCccccccc----ccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCCCchhhhcCCCCCE
Q 002899 221 TSLTDLRISDLKGSESAFPKLDK----MNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNF 296 (869)
Q Consensus 221 ~~L~~L~L~~n~~~~~~~~~~~~----~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 296 (869)
++|+.|+|++|.+....+..+.. .+|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|++. |. +..+++|+.
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~ 298 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDN 298 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSC
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccE
Confidence 88888888888877763322222 36777777777777 4455443 6777777777777753 33 566777777
Q ss_pred EEeeCCcCC
Q 002899 297 MYLTGNKLT 305 (869)
Q Consensus 297 L~Ls~N~l~ 305 (869)
|+|++|+|+
T Consensus 299 L~L~~N~l~ 307 (310)
T 4glp_A 299 LTLDGNPFL 307 (310)
T ss_dssp EECSSTTTS
T ss_pred EECcCCCCC
Confidence 777777775
No 328
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=3.2e-25 Score=246.75 Aligned_cols=263 Identities=17% Similarity=0.244 Sum_probs=204.5
Q ss_pred EEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCc----hhhccc--cceEEEeecccCCCCCchhhcCc-----cc
Q 002899 58 TIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFS----PQWASL--QLVELSVMGNRLSGPFPKVLTNI-----TT 126 (869)
Q Consensus 58 ~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~----~~~~~l--~L~~L~Ls~N~l~~~~~~~~~~l-----~~ 126 (869)
..+++.|++++.+|..+...++|++|+|++|.|++..+ ..+..+ +|++|+|++|++++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 36788999999988888888889999999999998887 566655 69999999999998888888876 99
Q ss_pred cccccccccccCCCCCccc----cCC-CCccEEEeecccccccCCccc----cC-CCCCCeEeccCCcCCCCCc----cc
Q 002899 127 LKNLSIEGNLFTGSIPPDI----RKL-INLQKLILSSNSFTGELPAEL----TK-LTNLNDLRISDNNFSGKIP----EF 192 (869)
Q Consensus 127 L~~L~Ls~N~l~~~~~~~~----~~l-~~L~~L~Ls~N~i~~~~p~~~----~~-l~~L~~L~Ls~N~l~~~~~----~~ 192 (869)
|++|+|++|.+++..+..+ ..+ ++|++|+|++|+|++..+..+ .. .++|++|+|++|++++..+ ..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 9999999999997766644 444 899999999999987665544 33 3699999999999986444 34
Q ss_pred cCCCC-cccEEEccCCcCCCCchHhhh----cC-CCCCEEEcCCCCCCCCcccccc------cccceEEEcccccCccCC
Q 002899 193 IGKWK-KIQKLHIQGSSLEGPIPASIS----AL-TSLTDLRISDLKGSESAFPKLD------KMNLKTLILTKCLIHGEI 260 (869)
Q Consensus 193 ~~~l~-~L~~L~L~~N~l~~~~~~~l~----~l-~~L~~L~L~~n~~~~~~~~~~~------~~~L~~L~Ls~N~i~~~~ 260 (869)
+..++ +|++|+|++|++++..+..+. .+ ++|+.|+|++|.+.......+. ..+|+.|+|++|.|++..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 45555 999999999999887765444 45 5999999999998875433221 137999999999998765
Q ss_pred C----cccCCCCCcCEEeccCCCCCCCCch-------hhhcCCCCCEEEeeCCcCCCCCchhhhccCCcee
Q 002899 261 P----DYIGDMTKLKNIDLSFNNLTGGIPT-------TFEKLAKTNFMYLTGNKLTGPVPKYIFNSNKNVD 320 (869)
Q Consensus 261 p----~~~~~l~~L~~L~Ls~N~l~~~~p~-------~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~l~ 320 (869)
+ ..+..+++|+.|+|++|.+.+..+. .+..+++|+.|||++|++.+..+..+...++.+.
T Consensus 242 ~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~~~~~~~l~~~~ 312 (362)
T 3goz_A 242 LENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSIPISNLIRELS 312 (362)
T ss_dssp HHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGCHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcchHHHHHHHHHCC
Confidence 5 3456778899999999986654443 4567778889999999988776666655544443
No 329
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.89 E-value=2.6e-23 Score=221.64 Aligned_cols=208 Identities=20% Similarity=0.261 Sum_probs=147.8
Q ss_pred ceEEEeecccCCCCCchhhcCccccccccccccccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccC
Q 002899 103 LVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISD 182 (869)
Q Consensus 103 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~ 182 (869)
+..+++..+.+... ..+..+++|+.|++++|.++. + ..+..+++|++|+|++|++++. ..+..+++|++|+|++
T Consensus 21 l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~ 94 (272)
T 3rfs_A 21 TIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTG 94 (272)
T ss_dssp HHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTT
T ss_pred HHHHHhcCcccccc--cccccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCC
Confidence 33444444444433 224556677777777776662 2 2466667777777777776642 3566667777777777
Q ss_pred CcCCCCCccccCCCCcccEEEccCCcCCCCchHhhhcCCCCCEEEcCCCCCCCCcccccccccceEEEcccccCccCCCc
Q 002899 183 NNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPD 262 (869)
Q Consensus 183 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~ 262 (869)
|++++..+..|..+++|++|+|++|++++..+..+..+++|+.|+ |++|+|++..+.
T Consensus 95 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~-----------------------L~~n~l~~~~~~ 151 (272)
T 3rfs_A 95 NQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLN-----------------------LAHNQLQSLPKG 151 (272)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE-----------------------CCSSCCCCCCTT
T ss_pred CccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEE-----------------------CCCCccCccCHH
Confidence 777666666666667777777777776666555566666555554 557777777777
Q ss_pred ccCCCCCcCEEeccCCCCCCCCchhhhcCCCCCEEEeeCCcCCCCCchhh--hccCCceeeeccCccCCCCCCCCCCCCC
Q 002899 263 YIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYI--FNSNKNVDISLNNFTWESSDPIECPRGS 340 (869)
Q Consensus 263 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~--~~~l~~l~ls~N~~~~~~~~p~~C~c~~ 340 (869)
.|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++++..|..+ +..++.|++++| ||.|+|..
T Consensus 152 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N--------~~~~~~~~ 223 (272)
T 3rfs_A 152 VFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDN--------PWDCTCPG 223 (272)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSS--------CBCCCTTT
T ss_pred HhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCC--------CccccCcH
Confidence 88999999999999999998888889999999999999999998777655 568999999999 88899974
Q ss_pred -ccceecc
Q 002899 341 -VNLVESY 347 (869)
Q Consensus 341 -~~~~~~l 347 (869)
.++..|.
T Consensus 224 l~~l~~~~ 231 (272)
T 3rfs_A 224 IRYLSEWI 231 (272)
T ss_dssp THHHHHHH
T ss_pred HHHHHHHH
Confidence 3444443
No 330
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.89 E-value=2.2e-23 Score=214.90 Aligned_cols=188 Identities=19% Similarity=0.242 Sum_probs=127.5
Q ss_pred ccccccccccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCC
Q 002899 128 KNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGS 207 (869)
Q Consensus 128 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 207 (869)
+.+++++|.++ .+|..+. ++|++|+|++|+|++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 34555555555 3444333 45666666666666555556666666666666666666666666666666666666666
Q ss_pred cCCCCchHhhhcCCCCCEEEcCCCCCCCCcccccccccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCCCchh
Q 002899 208 SLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTT 287 (869)
Q Consensus 208 ~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 287 (869)
+|+...+..|..+++|+.|+|+ +|+|++..|..|..+++|+.|+|++|+|++..+..
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~-----------------------~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 147 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLN-----------------------ANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGT 147 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECC-----------------------SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTT
T ss_pred cCCccCHhHccCCCCCCEEECC-----------------------CCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHH
Confidence 6665555555555555544443 55555566777778888888888888888777777
Q ss_pred hhcCCCCCEEEeeCCcCCCCCchhhhccCCceeeeccCccCCCCCCCCCCCCCccceeccCCCCCCCCCCcCccCCCCCC
Q 002899 288 FEKLAKTNFMYLTGNKLTGPVPKYIFNSNKNVDISLNNFTWESSDPIECPRGSVNLVESYSSPRNKLDKVHPCLRQNFPC 367 (869)
Q Consensus 288 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~l~ls~N~~~~~~~~p~~C~c~~~~~~~~l~~~~~~~~~~~~~~~~~~~C 367 (869)
|..+++|+.|+|++| ||.|+|.+.|+..|+...... .....|
T Consensus 148 ~~~l~~L~~L~L~~N------------------------------~~~c~c~l~~l~~~l~~~~~~--------~~~~~C 189 (220)
T 2v9t_B 148 FSPLRAIQTMHLAQN------------------------------PFICDCHLKWLADYLHTNPIE--------TSGARC 189 (220)
T ss_dssp TTTCTTCCEEECCSS------------------------------CEECSGGGHHHHHHHHHCCCB--------CSCCBE
T ss_pred HhCCCCCCEEEeCCC------------------------------CcCCCCccHHHHHHHHhCCCC--------ccCCCc
Confidence 888888888888887 888999999999998753322 134679
Q ss_pred CCCcccccceee
Q 002899 368 SAPADQYHYTLH 379 (869)
Q Consensus 368 ~~p~~~~~~~~~ 379 (869)
+.|..++|+.+.
T Consensus 190 ~~P~~l~g~~l~ 201 (220)
T 2v9t_B 190 TSPRRLANKRIG 201 (220)
T ss_dssp EESGGGTTCBGG
T ss_pred CCchHHcCCchh
Confidence 888888876544
No 331
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.89 E-value=2.5e-22 Score=237.17 Aligned_cols=236 Identities=27% Similarity=0.303 Sum_probs=192.7
Q ss_pred ceEEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccccceEEEeecccCCCCCchhhcCcccccccccc
Q 002899 54 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIE 133 (869)
Q Consensus 54 ~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 133 (869)
.+++.|+|++|+|+ .+|. .+++|++|+|++|+|+.++. ...+|++|+|++|++++..+ .+++|+.|+|+
T Consensus 61 ~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~lp~---~l~~L~~L~Ls~N~l~~l~~----~l~~L~~L~L~ 129 (622)
T 3g06_A 61 AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTSLPV---LPPGLLELSIFSNPLTHLPA----LPSGLCKLWIF 129 (622)
T ss_dssp TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSCCCC---CCTTCCEEEECSCCCCCCCC----CCTTCCEEECC
T ss_pred CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCcCCC---CCCCCCEEECcCCcCCCCCC----CCCCcCEEECC
Confidence 57999999999999 5665 57899999999999997655 33489999999999996544 67899999999
Q ss_pred ccccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcCCCCc
Q 002899 134 GNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPI 213 (869)
Q Consensus 134 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 213 (869)
+|+|++ +|.. +++|++|+|++|+|++ +|. .+++|+.|+|++|+|++ +| ..+++|+.|+|++|.|++.
T Consensus 130 ~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~l- 196 (622)
T 3g06_A 130 GNQLTS-LPVL---PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLASL- 196 (622)
T ss_dssp SSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSCC-
T ss_pred CCCCCc-CCCC---CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCCC-
Confidence 999995 5543 4899999999999994 453 35789999999999985 45 4578999999999999863
Q ss_pred hHhhhcCCCCCEEEcCCCCCCCCcccccccccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCCCchhhhcCCC
Q 002899 214 PASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAK 293 (869)
Q Consensus 214 ~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 293 (869)
|. .+++|+.|++++|.++..+.. ..+|+.|+|++|+|++ +| ..+++|+.|+|++|+|+ .+|. .+++
T Consensus 197 ~~---~~~~L~~L~L~~N~l~~l~~~---~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~ 262 (622)
T 3g06_A 197 PT---LPSELYKLWAYNNRLTSLPAL---PSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSG 262 (622)
T ss_dssp CC---CCTTCCEEECCSSCCSSCCCC---CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTT
T ss_pred CC---ccchhhEEECcCCcccccCCC---CCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---cccc
Confidence 32 357899999999998876532 2579999999999986 44 45688999999999999 4554 6788
Q ss_pred CCEEEeeCCcCCCCCchhh--hccCCceeeeccCccC
Q 002899 294 TNFMYLTGNKLTGPVPKYI--FNSNKNVDISLNNFTW 328 (869)
Q Consensus 294 L~~L~Ls~N~l~~~~p~~~--~~~l~~l~ls~N~~~~ 328 (869)
|+.|+|++|+|+ .+|..+ ++.++.|+|++|+++.
T Consensus 263 L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~ 298 (622)
T 3g06_A 263 LLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSE 298 (622)
T ss_dssp CCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCH
T ss_pred CcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCC
Confidence 999999999999 678776 4578889999997764
No 332
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.89 E-value=9.3e-23 Score=219.40 Aligned_cols=200 Identities=22% Similarity=0.194 Sum_probs=174.5
Q ss_pred cceEEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhhcCcccccccc
Q 002899 53 TCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLS 131 (869)
Q Consensus 53 ~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 131 (869)
..+++.|++++++++ .+|..+. ++|+.|+|++|.|++..+..|..+ +|++|+|++|++++..+. ..+++|++|+
T Consensus 9 l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~~L~ 83 (290)
T 1p9a_G 9 VASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLGTLD 83 (290)
T ss_dssp STTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCCEEE
T ss_pred cCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCCEEE
Confidence 346889999999999 6676665 789999999999999999889888 899999999999965443 7899999999
Q ss_pred ccccccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcCCC
Q 002899 132 IEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEG 211 (869)
Q Consensus 132 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 211 (869)
|++|+|+ .+|..+..+++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+|+.
T Consensus 84 Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 162 (290)
T 1p9a_G 84 LSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTE 162 (290)
T ss_dssp CCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSC
T ss_pred CCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCc
Confidence 9999999 778889999999999999999998777889999999999999999998888889999999999999999998
Q ss_pred CchHhhhcCCCCCEEEcCCCCCCCCcccccccccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCC
Q 002899 212 PIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTG 282 (869)
Q Consensus 212 ~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~ 282 (869)
..+..|..+++|+.|+|++|++ + .+|..+..+++|+.|+|++|.+..
T Consensus 163 l~~~~~~~l~~L~~L~L~~N~l-----------------------~-~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 163 LPAGLLNGLENLDTLLLQENSL-----------------------Y-TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp CCTTTTTTCTTCCEEECCSSCC-----------------------C-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred cCHHHhcCcCCCCEEECCCCcC-----------------------C-ccChhhcccccCCeEEeCCCCccC
Confidence 7777888898888887775554 4 345555667788889999888873
No 333
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.89 E-value=1.8e-25 Score=256.89 Aligned_cols=272 Identities=18% Similarity=0.220 Sum_probs=124.4
Q ss_pred EEEEeccCCCccc----cCCccccCCCCCCEEEeecCcCCCCCchhhc-cc-----cceEEEeecccCCC----CCchhh
Q 002899 56 VVTIALKAQNLTG----TLPTELSKLRYLKQLDLSRNCLTGSFSPQWA-SL-----QLVELSVMGNRLSG----PFPKVL 121 (869)
Q Consensus 56 v~~L~l~~~~l~~----~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~-~l-----~L~~L~Ls~N~l~~----~~~~~~ 121 (869)
++.|+|++|+++. .++..+..+++|++|+|++|.+++..+..+. .+ +|++|+|++|+++. .++..+
T Consensus 30 L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l 109 (461)
T 1z7x_W 30 CQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTL 109 (461)
T ss_dssp CSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHT
T ss_pred ccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHHH
Confidence 4455555555443 2334444455555555555555433222221 11 25555555555542 234445
Q ss_pred cCccccccccccccccCCCCCccc-----cCCCCccEEEeecccccccC----CccccCCCCCCeEeccCCcCCCCCccc
Q 002899 122 TNITTLKNLSIEGNLFTGSIPPDI-----RKLINLQKLILSSNSFTGEL----PAELTKLTNLNDLRISDNNFSGKIPEF 192 (869)
Q Consensus 122 ~~l~~L~~L~Ls~N~l~~~~~~~~-----~~l~~L~~L~Ls~N~i~~~~----p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 192 (869)
..+++|++|+|++|.+++..+..+ ...++|++|+|++|++++.. +..+..+++|++|+|++|.++...+..
T Consensus 110 ~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~ 189 (461)
T 1z7x_W 110 RTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRV 189 (461)
T ss_dssp TSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHH
T ss_pred ccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHH
Confidence 555555555555555443222211 11334555555555555322 333344455555555555554332322
Q ss_pred cC-----CCCcccEEEccCCcCCCC----chHhhhcCCCCCEEEcCCCCCCCCccccc------ccccceEEEcccccCc
Q 002899 193 IG-----KWKKIQKLHIQGSSLEGP----IPASISALTSLTDLRISDLKGSESAFPKL------DKMNLKTLILTKCLIH 257 (869)
Q Consensus 193 ~~-----~l~~L~~L~L~~N~l~~~----~~~~l~~l~~L~~L~L~~n~~~~~~~~~~------~~~~L~~L~Ls~N~i~ 257 (869)
+. .+++|++|+|++|.++.. ++..+..+++|+.|+|++|.+.......+ ...+|+.|+|++|.|+
T Consensus 190 l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~ 269 (461)
T 1z7x_W 190 LCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGIT 269 (461)
T ss_dssp HHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCC
T ss_pred HHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCC
Confidence 22 133555555555555542 34445555555555555555443321111 1224555555555555
Q ss_pred cC----CCcccCCCCCcCEEeccCCCCCCCCchhhhcC-----CCCCEEEeeCCcCCCCC----chhh--hccCCceeee
Q 002899 258 GE----IPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKL-----AKTNFMYLTGNKLTGPV----PKYI--FNSNKNVDIS 322 (869)
Q Consensus 258 ~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~----p~~~--~~~l~~l~ls 322 (869)
.. ++..+..+++|+.|+|++|.+++..+..+... ++|+.|+|++|++++.. |..+ .+.++.|+++
T Consensus 270 ~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls 349 (461)
T 1z7x_W 270 AKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQIS 349 (461)
T ss_dssp HHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECC
T ss_pred HHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEcc
Confidence 43 34444445555555555555543333333322 45555555555555432 2221 2345555555
Q ss_pred ccCcc
Q 002899 323 LNNFT 327 (869)
Q Consensus 323 ~N~~~ 327 (869)
+|.++
T Consensus 350 ~n~i~ 354 (461)
T 1z7x_W 350 NNRLE 354 (461)
T ss_dssp SSBCH
T ss_pred CCccc
Confidence 55443
No 334
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.88 E-value=4e-23 Score=224.67 Aligned_cols=230 Identities=17% Similarity=0.192 Sum_probs=187.0
Q ss_pred hhhccccceEEEeecccCCCCCch---hhcCccccccccccccccCCCCCccc--cCCCCccEEEeecccccccCC----
Q 002899 96 PQWASLQLVELSVMGNRLSGPFPK---VLTNITTLKNLSIEGNLFTGSIPPDI--RKLINLQKLILSSNSFTGELP---- 166 (869)
Q Consensus 96 ~~~~~l~L~~L~Ls~N~l~~~~~~---~~~~l~~L~~L~Ls~N~l~~~~~~~~--~~l~~L~~L~Ls~N~i~~~~p---- 166 (869)
..+...+++.|.+.++.++...-. .+..+++|++|+|++|.+++..|..+ ..+++|++|+|++|++++..+
T Consensus 59 ~~~~~~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~ 138 (310)
T 4glp_A 59 DTVKALRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAE 138 (310)
T ss_dssp GGGSSCCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHH
T ss_pred HHhhhcceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHH
Confidence 344555789999999887632111 12345779999999999999999988 899999999999999997555
Q ss_pred ccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcCCCC--c--hHhhhcCCCCCEEEcCCCCCCCCccc---
Q 002899 167 AELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGP--I--PASISALTSLTDLRISDLKGSESAFP--- 239 (869)
Q Consensus 167 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--~--~~~l~~l~~L~~L~L~~n~~~~~~~~--- 239 (869)
..+..+++|++|+|++|++++..+..|..+++|++|+|++|++.+. + +..+..+++|+.|+|++|.++..+..
T Consensus 139 ~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~ 218 (310)
T 4glp_A 139 LQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAA 218 (310)
T ss_dssp HHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHH
T ss_pred HHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHH
Confidence 3456799999999999999998999999999999999999998753 2 22347899999999999999754432
Q ss_pred cc-ccccceEEEcccccCccCCCcccCCC---CCcCEEeccCCCCCCCCchhhhcCCCCCEEEeeCCcCCCCCchhhhcc
Q 002899 240 KL-DKMNLKTLILTKCLIHGEIPDYIGDM---TKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFNS 315 (869)
Q Consensus 240 ~~-~~~~L~~L~Ls~N~i~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 315 (869)
.+ ...+|++|+|++|+|++..|..+..+ ++|++|+|++|+|+ .+|..+. ++|+.|+|++|+|++.....-++.
T Consensus 219 l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~~~~~~l~~ 295 (310)
T 4glp_A 219 LAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRAPQPDELPE 295 (310)
T ss_dssp HHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSCCCTTSCCC
T ss_pred HHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCCchhhhCCC
Confidence 11 23589999999999999888877776 79999999999999 6677664 899999999999997422233578
Q ss_pred CCceeeeccCccC
Q 002899 316 NKNVDISLNNFTW 328 (869)
Q Consensus 316 l~~l~ls~N~~~~ 328 (869)
++.|+|++|+++.
T Consensus 296 L~~L~L~~N~l~~ 308 (310)
T 4glp_A 296 VDNLTLDGNPFLV 308 (310)
T ss_dssp CSCEECSSTTTSC
T ss_pred ccEEECcCCCCCC
Confidence 9999999997764
No 335
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.88 E-value=8.6e-23 Score=213.22 Aligned_cols=197 Identities=16% Similarity=0.141 Sum_probs=164.3
Q ss_pred cceEEEeecccCCCCCchhhcCccccccccccccc-cCCCCCccccCCCCccEEEeec-ccccccCCccccCCCCCCeEe
Q 002899 102 QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNL-FTGSIPPDIRKLINLQKLILSS-NSFTGELPAELTKLTNLNDLR 179 (869)
Q Consensus 102 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~Ls~-N~i~~~~p~~~~~l~~L~~L~ 179 (869)
+|++|+|++|+++++.+..|.++++|++|+|++|+ ++...+..|.++++|++|+|++ |++++..+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 78999999999998888889999999999999997 8866667888999999999998 899877777888999999999
Q ss_pred ccCCcCCCCCccccCCCCccc---EEEccCC-cCCCCchHhhhcCCCCCEEEcCCCCCCCCcccccccccceEEEccccc
Q 002899 180 ISDNNFSGKIPEFIGKWKKIQ---KLHIQGS-SLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCL 255 (869)
Q Consensus 180 Ls~N~l~~~~~~~~~~l~~L~---~L~L~~N-~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~ 255 (869)
|++|++++ +|. |..+++|+ .|++++| .++...+..|..+++|+ ..|+|++|+
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~----------------------~~L~l~~n~ 167 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNET----------------------LTLKLYNNG 167 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSE----------------------EEEECCSCC
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcce----------------------eEEEcCCCC
Confidence 99999986 555 78888887 8889888 88866666677666555 045556889
Q ss_pred CccCCCcccCCCCCcCEEeccCCC-CCCCCchhhhcC-CCCCEEEeeCCcCCCCCchhhhccCCceeeecc
Q 002899 256 IHGEIPDYIGDMTKLKNIDLSFNN-LTGGIPTTFEKL-AKTNFMYLTGNKLTGPVPKYIFNSNKNVDISLN 324 (869)
Q Consensus 256 i~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~~l~~l~ls~N 324 (869)
|+...+..|.. ++|+.|+|++|+ +++..+..|..+ ++|+.|+|++|+|+ .+|...+..++.|+++++
T Consensus 168 l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~-~l~~~~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 168 FTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT-ALPSKGLEHLKELIARNT 236 (239)
T ss_dssp CCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCC-CCCCTTCTTCSEEECTTC
T ss_pred CcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccc-cCChhHhccCceeeccCc
Confidence 98655566666 899999999995 998888889999 99999999999999 456667888999998876
No 336
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.88 E-value=2.9e-22 Score=213.27 Aligned_cols=183 Identities=20% Similarity=0.249 Sum_probs=164.6
Q ss_pred cceEEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhhcCcccccccc
Q 002899 53 TCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLS 131 (869)
Q Consensus 53 ~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 131 (869)
...++.|+|++|++++..+..|.++++|++|+|++|.|+.+++..|..+ +|++|+|++|++++..+..|..+++|++|+
T Consensus 36 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 115 (270)
T 2o6q_A 36 PADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELR 115 (270)
T ss_dssp CTTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEE
T ss_pred CCCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEE
Confidence 3468999999999998777899999999999999999999888888877 899999999999988888899999999999
Q ss_pred ccccccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcCCC
Q 002899 132 IEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEG 211 (869)
Q Consensus 132 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 211 (869)
|++|++++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|++++
T Consensus 116 l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 195 (270)
T 2o6q_A 116 LDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKR 195 (270)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCc
Confidence 99999998888889999999999999999997767778999999999999999998888889999999999999999998
Q ss_pred CchHhhhcCCCCCEEEcCCCCCCC
Q 002899 212 PIPASISALTSLTDLRISDLKGSE 235 (869)
Q Consensus 212 ~~~~~l~~l~~L~~L~L~~n~~~~ 235 (869)
..+..+..+++|+.|+|++|++..
T Consensus 196 ~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 196 VPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp CCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCHHHhccccCCCEEEecCCCeeC
Confidence 777788889988888888777543
No 337
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=3e-22 Score=217.46 Aligned_cols=207 Identities=24% Similarity=0.321 Sum_probs=120.6
Q ss_pred EeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhhcCcccccccccccccc
Q 002899 59 IALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLF 137 (869)
Q Consensus 59 L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 137 (869)
+.+..+++++.++ +.++++|++|++++|.++... .+..+ +|++|+|++|++++..+ +..+++|++|+|++|++
T Consensus 24 ~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~l~--~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l 97 (308)
T 1h6u_A 24 IAAGKSNVTDTVT--QADLDGITTLSAFGTGVTTIE--GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPL 97 (308)
T ss_dssp HHTTCSSTTSEEC--HHHHHTCCEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCC
T ss_pred HHhCCCCcCceec--HHHcCCcCEEEeeCCCccCch--hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcC
Confidence 3444445544332 345566777777777666432 23333 56666666666654433 55566666666666665
Q ss_pred CCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcCCCCchHhh
Q 002899 138 TGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASI 217 (869)
Q Consensus 138 ~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l 217 (869)
++. +.+..+++|++|+|++|++++. + .+..+++|++|+|++|++++..+ +..+++|+.|+|++|.+++..+ +
T Consensus 98 ~~~--~~~~~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l 169 (308)
T 1h6u_A 98 KNV--SAIAGLQSIKTLDLTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--L 169 (308)
T ss_dssp SCC--GGGTTCTTCCEEECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--G
T ss_pred CCc--hhhcCCCCCCEEECCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--h
Confidence 532 2455555566666666655532 2 25555555555555555554332 5555555555555555554322 4
Q ss_pred hcCCCCCEEEcCCCCCCCCcccccccccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCCCchhhhcCCCCCEE
Q 002899 218 SALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFM 297 (869)
Q Consensus 218 ~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 297 (869)
..+++| +.|+|++|+|++..+ +..+++|+.|+|++|++++..+ +..+++|+.|
T Consensus 170 ~~l~~L-----------------------~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L 222 (308)
T 1h6u_A 170 ANLSKL-----------------------TTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIV 222 (308)
T ss_dssp TTCTTC-----------------------CEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEE
T ss_pred cCCCCC-----------------------CEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEE
Confidence 455544 455555666654433 6678888888888888885543 7888888888
Q ss_pred EeeCCcCCC
Q 002899 298 YLTGNKLTG 306 (869)
Q Consensus 298 ~Ls~N~l~~ 306 (869)
+|++|++++
T Consensus 223 ~l~~N~i~~ 231 (308)
T 1h6u_A 223 TLTNQTITN 231 (308)
T ss_dssp EEEEEEEEC
T ss_pred EccCCeeec
Confidence 888888875
No 338
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.88 E-value=1.1e-22 Score=209.70 Aligned_cols=187 Identities=20% Similarity=0.206 Sum_probs=135.5
Q ss_pred ccccccccccCCCCCccccCCCCccEEEeecccccccCC-ccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccC
Q 002899 128 KNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELP-AELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQG 206 (869)
Q Consensus 128 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 206 (869)
+.|++++|.++ .+|..+. ..+++|+|++|+|++..+ ..|..+++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 45666666666 3454443 245677777777775543 3466777777777777777766666777777777777777
Q ss_pred CcCCCCchHhhhcCCCCCEEEcCCCCCCCCcccccccccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCCCch
Q 002899 207 SSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPT 286 (869)
Q Consensus 207 N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 286 (869)
|.|++..+..|..+++|+.|+|+ +|+|++..|..|..+++|+.|+|++|+|++..|.
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls-----------------------~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 147 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLR-----------------------SNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPG 147 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECT-----------------------TSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTT
T ss_pred CccCccCHhHhcCCcCCCEEECC-----------------------CCcCCeECHhHcCCCccCCEEECCCCcCCEECHH
Confidence 77777666677777666655554 5666666777888899999999999999988888
Q ss_pred hhhcCCCCCEEEeeCCcCCCCCchhhhccCCceeeeccCccCCCCCCCCCCCCCccceeccCCCCCCCCCCcCccCCCCC
Q 002899 287 TFEKLAKTNFMYLTGNKLTGPVPKYIFNSNKNVDISLNNFTWESSDPIECPRGSVNLVESYSSPRNKLDKVHPCLRQNFP 366 (869)
Q Consensus 287 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~l~ls~N~~~~~~~~p~~C~c~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 366 (869)
.|..+++|+.|+|++| ||.|+|.+.|+..|+...... .....
T Consensus 148 ~~~~l~~L~~L~L~~N------------------------------~l~c~c~l~~l~~~~~~~~~~--------~~~~~ 189 (220)
T 2v70_A 148 AFDTLHSLSTLNLLAN------------------------------PFNCNCYLAWLGEWLRKKRIV--------TGNPR 189 (220)
T ss_dssp TTTTCTTCCEEECCSC------------------------------CEECSGGGHHHHHHHHHSCCB--------CCCCE
T ss_pred HhcCCCCCCEEEecCc------------------------------CCcCCCchHHHHHHHHhcCcc--------ccCCc
Confidence 9999999999988888 788999999999998743321 13347
Q ss_pred CCCCccccccee
Q 002899 367 CSAPADQYHYTL 378 (869)
Q Consensus 367 C~~p~~~~~~~~ 378 (869)
|+.|..+++..+
T Consensus 190 C~~P~~l~g~~l 201 (220)
T 2v70_A 190 CQKPYFLKEIPI 201 (220)
T ss_dssp EEESGGGTTEEG
T ss_pred cCCChHHCCCCh
Confidence 888887776543
No 339
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=2.1e-24 Score=242.32 Aligned_cols=255 Identities=18% Similarity=0.235 Sum_probs=180.7
Q ss_pred cCCccccCCCCCCEEEeecCcCCCCCchh----hccc-cceEEEeeccc---CCCCCchhh-------cCcccccccccc
Q 002899 69 TLPTELSKLRYLKQLDLSRNCLTGSFSPQ----WASL-QLVELSVMGNR---LSGPFPKVL-------TNITTLKNLSIE 133 (869)
Q Consensus 69 ~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~----~~~l-~L~~L~Ls~N~---l~~~~~~~~-------~~l~~L~~L~Ls 133 (869)
.++..+..+++|+.|+|++|.|+...+.. +..+ +|++|+|++|. +++.+|..+ ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 56677788888888888888887665444 3344 78888888854 444455444 677888888888
Q ss_pred ccccCC----CCCccccCCCCccEEEeecccccccCCccc----cCC---------CCCCeEeccCCcCC-CCCc---cc
Q 002899 134 GNLFTG----SIPPDIRKLINLQKLILSSNSFTGELPAEL----TKL---------TNLNDLRISDNNFS-GKIP---EF 192 (869)
Q Consensus 134 ~N~l~~----~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~----~~l---------~~L~~L~Ls~N~l~-~~~~---~~ 192 (869)
+|.+++ .++..+..+++|++|+|++|.|+...+..+ ..+ ++|++|+|++|+++ ..++ ..
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 182 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKT 182 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHH
Confidence 888886 356677788888888888888865433333 333 78888888888886 3344 45
Q ss_pred cCCCCcccEEEccCCcCCC-----CchHhhhcCCCCCEEEcCCCCCCCC-----cccccccccceEEEcccccCccC---
Q 002899 193 IGKWKKIQKLHIQGSSLEG-----PIPASISALTSLTDLRISDLKGSES-----AFPKLDKMNLKTLILTKCLIHGE--- 259 (869)
Q Consensus 193 ~~~l~~L~~L~L~~N~l~~-----~~~~~l~~l~~L~~L~L~~n~~~~~-----~~~~~~~~~L~~L~Ls~N~i~~~--- 259 (869)
|..+++|+.|+|++|+++. ..+..+..+++|+.|+|++|.++.. +.......+|+.|+|++|.|++.
T Consensus 183 l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~ 262 (386)
T 2ca6_A 183 FQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAA 262 (386)
T ss_dssp HHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHH
T ss_pred HHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHH
Confidence 6678888888888888873 2333777888888888888887521 11122234788888888888765
Q ss_pred -CCccc--CCCCCcCEEeccCCCCCC----CCchhh-hcCCCCCEEEeeCCcCCCCCc--hhh---hccCCceeeec
Q 002899 260 -IPDYI--GDMTKLKNIDLSFNNLTG----GIPTTF-EKLAKTNFMYLTGNKLTGPVP--KYI---FNSNKNVDISL 323 (869)
Q Consensus 260 -~p~~~--~~l~~L~~L~Ls~N~l~~----~~p~~~-~~l~~L~~L~Ls~N~l~~~~p--~~~---~~~l~~l~ls~ 323 (869)
++..+ +.+++|+.|+|++|+|++ .+|..+ .++++|+.|+|++|++++..| ..+ ++.++.+++..
T Consensus 263 ~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~~~~~l~~~l~~~~~~~l~~ 339 (386)
T 2ca6_A 263 AVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDDVVDEIREVFSTRGRGELDE 339 (386)
T ss_dssp HHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSHHHHHHHHHHHHHTCCEECC
T ss_pred HHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchhHHHHHHHHhhhcCcchhhh
Confidence 45566 348999999999999986 477777 668999999999999998775 333 33444455543
No 340
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.87 E-value=1.2e-23 Score=234.01 Aligned_cols=247 Identities=16% Similarity=0.164 Sum_probs=200.8
Q ss_pred EEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCc----hhhcCcc-ccccccccccccCCCCCccccCC-----CC
Q 002899 82 QLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFP----KVLTNIT-TLKNLSIEGNLFTGSIPPDIRKL-----IN 150 (869)
Q Consensus 82 ~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~----~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l-----~~ 150 (869)
.+.|+.|.+++.+|..+... +|++|+|++|.+++..+ ..|..++ +|++|+|++|.|++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 47899999999999888877 59999999999998887 7888898 99999999999998877777765 99
Q ss_pred ccEEEeecccccccCCccc----cCC-CCCCeEeccCCcCCCCCccccC----C-CCcccEEEccCCcCCCCc----hHh
Q 002899 151 LQKLILSSNSFTGELPAEL----TKL-TNLNDLRISDNNFSGKIPEFIG----K-WKKIQKLHIQGSSLEGPI----PAS 216 (869)
Q Consensus 151 L~~L~Ls~N~i~~~~p~~~----~~l-~~L~~L~Ls~N~l~~~~~~~~~----~-l~~L~~L~L~~N~l~~~~----~~~ 216 (869)
|++|+|++|++++..+..+ ..+ ++|++|+|++|+|++..+..+. . .++|++|+|++|.++... +..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 9999999999997666644 444 8999999999999977776543 4 369999999999999644 445
Q ss_pred hhcCC-CCCEEEcCCCCCCCCccccccc------ccceEEEcccccCccC----CCcccCC-CCCcCEEeccCCCCCCCC
Q 002899 217 ISALT-SLTDLRISDLKGSESAFPKLDK------MNLKTLILTKCLIHGE----IPDYIGD-MTKLKNIDLSFNNLTGGI 284 (869)
Q Consensus 217 l~~l~-~L~~L~L~~n~~~~~~~~~~~~------~~L~~L~Ls~N~i~~~----~p~~~~~-l~~L~~L~Ls~N~l~~~~ 284 (869)
+..++ +|+.|+|++|.++......+.. .+|+.|+|++|.|++. ++..+.. .++|+.|+|++|+|++..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 56666 9999999999998776543322 3899999999999974 3444544 469999999999999876
Q ss_pred chh----hhcCCCCCEEEeeCCcCCCCCchhh---------hccCCceeeeccCccC
Q 002899 285 PTT----FEKLAKTNFMYLTGNKLTGPVPKYI---------FNSNKNVDISLNNFTW 328 (869)
Q Consensus 285 p~~----~~~l~~L~~L~Ls~N~l~~~~p~~~---------~~~l~~l~ls~N~~~~ 328 (869)
+.. +..+++|+.|+|++|++.+..+..+ ...++.||+++|++..
T Consensus 242 ~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~ 298 (362)
T 3goz_A 242 LENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHP 298 (362)
T ss_dssp HHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCG
T ss_pred HHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCC
Confidence 644 4567999999999999776655533 2356789999997653
No 341
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.87 E-value=4e-22 Score=209.80 Aligned_cols=177 Identities=19% Similarity=0.250 Sum_probs=154.8
Q ss_pred EEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhhcCccccccccccc
Q 002899 56 VVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEG 134 (869)
Q Consensus 56 v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 134 (869)
.+.+++++++++ .+|..+. ++|+.|+|++|.|++..+..|..+ +|++|+|++|++++..+..|..+++|++|+|++
T Consensus 16 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 92 (251)
T 3m19_A 16 KKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLAN 92 (251)
T ss_dssp GTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred CeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCC
Confidence 457899999999 6777665 689999999999999988888887 899999999999988888899999999999999
Q ss_pred cccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcCCCCch
Q 002899 135 NLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIP 214 (869)
Q Consensus 135 N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 214 (869)
|+|++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|++++..+
T Consensus 93 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 172 (251)
T 3m19_A 93 NQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPH 172 (251)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCH
Confidence 99997777788999999999999999997777778889999999999999998777789999999999999999998888
Q ss_pred HhhhcCCCCCEEEcCCCCCCC
Q 002899 215 ASISALTSLTDLRISDLKGSE 235 (869)
Q Consensus 215 ~~l~~l~~L~~L~L~~n~~~~ 235 (869)
..+..+++|+.|+|++|++..
T Consensus 173 ~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 173 GAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp TTTTTCTTCCEEECCSCCBCT
T ss_pred HHHhCCCCCCEEEeeCCceeC
Confidence 888888888888888776644
No 342
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.87 E-value=1.4e-22 Score=224.24 Aligned_cols=243 Identities=15% Similarity=0.116 Sum_probs=140.6
Q ss_pred EEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCC-chhhcCcccccccccccc
Q 002899 58 TIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPF-PKVLTNITTLKNLSIEGN 135 (869)
Q Consensus 58 ~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~Ls~N 135 (869)
.+++++++++ .+|..+. ++|++|+|++|+|+.+++..|..+ +|++|+|++|++.+.+ +.+|.++++|++
T Consensus 13 ~v~C~~~~Lt-~iP~~l~--~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~------ 83 (350)
T 4ay9_X 13 VFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHE------ 83 (350)
T ss_dssp EEEEESTTCC-SCCTTCC--TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCE------
T ss_pred EEEecCCCCC-ccCcCcC--CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhh------
Confidence 5788889998 6777663 577888888877775555555544 4555555555543322 233444444433
Q ss_pred ccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccC-CcCCCCch
Q 002899 136 LFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQG-SSLEGPIP 214 (869)
Q Consensus 136 ~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~ 214 (869)
.+.++.|+|+...|..|..+++|++|++++|+|+...+..+....++..|++.+ |++....+
T Consensus 84 -----------------~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~ 146 (350)
T 4ay9_X 84 -----------------IRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIER 146 (350)
T ss_dssp -----------------EEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECT
T ss_pred -----------------hhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccc
Confidence 233344444444444445555555555555555444444444444455555533 34443334
Q ss_pred HhhhcCC-CCCEEEcCCCCCCCCcccccccccceEEEccc-ccCccCCCcccCCCCCcCEEeccCCCCCCCCchhhhcCC
Q 002899 215 ASISALT-SLTDLRISDLKGSESAFPKLDKMNLKTLILTK-CLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLA 292 (869)
Q Consensus 215 ~~l~~l~-~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~-N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 292 (869)
..|..+. .|+.|+|++|+++.++...+...+|++|++++ |.++.+.++.|..+++|+.|||++|+|+...+.. +.
T Consensus 147 ~~f~~~~~~l~~L~L~~N~i~~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~---~~ 223 (350)
T 4ay9_X 147 NSFVGLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYG---LE 223 (350)
T ss_dssp TSSTTSBSSCEEEECCSSCCCEECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSS---CT
T ss_pred cchhhcchhhhhhccccccccCCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhh---hc
Confidence 4444443 45556666666665555555555777777764 6677666677888899999999999998554444 44
Q ss_pred CCCEEEeeCCcCCCCCch-hhhccCCceeeeccCccCCCCCCCCCCC
Q 002899 293 KTNFMYLTGNKLTGPVPK-YIFNSNKNVDISLNNFTWESSDPIECPR 338 (869)
Q Consensus 293 ~L~~L~Ls~N~l~~~~p~-~~~~~l~~l~ls~N~~~~~~~~p~~C~c 338 (869)
+|+.|.+.++.-...+|. .-+..|+.+++++ ||+|+|
T Consensus 224 ~L~~L~~l~~~~l~~lP~l~~l~~L~~l~l~~---------~~~c~~ 261 (350)
T 4ay9_X 224 NLKKLRARSTYNLKKLPTLEKLVALMEASLTY---------PSHCCA 261 (350)
T ss_dssp TCCEEECTTCTTCCCCCCTTTCCSCCEEECSC---------HHHHHH
T ss_pred cchHhhhccCCCcCcCCCchhCcChhhCcCCC---------Cccccc
Confidence 555665555444445554 2256677777753 688865
No 343
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.86 E-value=1.6e-23 Score=235.11 Aligned_cols=233 Identities=16% Similarity=0.163 Sum_probs=189.6
Q ss_pred hhhccc-cceEEEeecccCCCCCc----hhhcCcccccccccccc---ccCCCCCccc-------cCCCCccEEEeeccc
Q 002899 96 PQWASL-QLVELSVMGNRLSGPFP----KVLTNITTLKNLSIEGN---LFTGSIPPDI-------RKLINLQKLILSSNS 160 (869)
Q Consensus 96 ~~~~~l-~L~~L~Ls~N~l~~~~~----~~~~~l~~L~~L~Ls~N---~l~~~~~~~~-------~~l~~L~~L~Ls~N~ 160 (869)
..+... +|++|+|++|+++...+ ..+..+++|++|+|++| ++++.+|..+ ..+++|++|+|++|+
T Consensus 26 ~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~ 105 (386)
T 2ca6_A 26 AVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNA 105 (386)
T ss_dssp HHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCC
T ss_pred HHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCc
Confidence 334433 79999999999997644 44778999999999996 4455556554 788999999999999
Q ss_pred ccc----cCCccccCCCCCCeEeccCCcCCCCCccccC----CC---------CcccEEEccCCcCC-CCch---Hhhhc
Q 002899 161 FTG----ELPAELTKLTNLNDLRISDNNFSGKIPEFIG----KW---------KKIQKLHIQGSSLE-GPIP---ASISA 219 (869)
Q Consensus 161 i~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~----~l---------~~L~~L~L~~N~l~-~~~~---~~l~~ 219 (869)
|++ .+|..+..+++|++|+|++|.++...+..+. .+ ++|++|+|++|+++ ..++ ..+..
T Consensus 106 l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~ 185 (386)
T 2ca6_A 106 FGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQS 185 (386)
T ss_dssp CCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHh
Confidence 997 4777889999999999999999755444444 34 89999999999998 3444 57889
Q ss_pred CCCCCEEEcCCCCCCCCc-----c-cccccccceEEEcccccCc----cCCCcccCCCCCcCEEeccCCCCCCC----Cc
Q 002899 220 LTSLTDLRISDLKGSESA-----F-PKLDKMNLKTLILTKCLIH----GEIPDYIGDMTKLKNIDLSFNNLTGG----IP 285 (869)
Q Consensus 220 l~~L~~L~L~~n~~~~~~-----~-~~~~~~~L~~L~Ls~N~i~----~~~p~~~~~l~~L~~L~Ls~N~l~~~----~p 285 (869)
+++|+.|+|++|.+.... . ......+|+.|+|++|.|+ ..+|..+..+++|+.|+|++|+|++. ++
T Consensus 186 ~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~ 265 (386)
T 2ca6_A 186 HRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVV 265 (386)
T ss_dssp CTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHH
T ss_pred CCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHH
Confidence 999999999999988432 1 2223348999999999996 56788899999999999999999976 56
Q ss_pred hhhhc--CCCCCEEEeeCCcCCC----CCchhh---hccCCceeeeccCccC
Q 002899 286 TTFEK--LAKTNFMYLTGNKLTG----PVPKYI---FNSNKNVDISLNNFTW 328 (869)
Q Consensus 286 ~~~~~--l~~L~~L~Ls~N~l~~----~~p~~~---~~~l~~l~ls~N~~~~ 328 (869)
..+.. +++|+.|+|++|++++ .+|..+ ++.++.|++++|+++.
T Consensus 266 ~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~ 317 (386)
T 2ca6_A 266 DAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 317 (386)
T ss_dssp HHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred HHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCc
Confidence 66644 9999999999999998 588877 4789999999997663
No 344
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.86 E-value=1.3e-22 Score=225.46 Aligned_cols=191 Identities=20% Similarity=0.199 Sum_probs=94.4
Q ss_pred cccccccccccCCCCCcccc-CCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEcc
Q 002899 127 LKNLSIEGNLFTGSIPPDIR-KLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQ 205 (869)
Q Consensus 127 L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 205 (869)
|+.|+|++|+|++..+..|. .+++|++|+|++|+|++..+..|.++++|++|+|++|+|+...+..|.++++|+.|+|+
T Consensus 41 l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 120 (361)
T 2xot_A 41 TALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLY 120 (361)
T ss_dssp CSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECC
Confidence 34444444444433333343 44444444444444444444444445555555555555544444444444445555544
Q ss_pred CCcCCCCchHhhhcCCCCCEEEcCCCCCCCCcccccccccceEEEcccccCccCCCccc---CCCCCcCEEeccCCCCCC
Q 002899 206 GSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYI---GDMTKLKNIDLSFNNLTG 282 (869)
Q Consensus 206 ~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~---~~l~~L~~L~Ls~N~l~~ 282 (869)
+|+|+...+..|..+++|+.|+|++|.++ +..+..| ..+++|+.|+|++|+|++
T Consensus 121 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~-----------------------~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 121 NNHIVVVDRNAFEDMAQLQKLYLSQNQIS-----------------------RFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCC-----------------------SCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CCcccEECHHHhCCcccCCEEECCCCcCC-----------------------eeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 44444433444444444444433322222 1122222 346677777777777776
Q ss_pred CCchhhhcCCCC--CEEEeeCCcCCCCCchhhhccCCceeeeccCccCCCCCCCCCCCCCccc-eeccCCCCCCCCCCcC
Q 002899 283 GIPTTFEKLAKT--NFMYLTGNKLTGPVPKYIFNSNKNVDISLNNFTWESSDPIECPRGSVNL-VESYSSPRNKLDKVHP 359 (869)
Q Consensus 283 ~~p~~~~~l~~L--~~L~Ls~N~l~~~~p~~~~~~l~~l~ls~N~~~~~~~~p~~C~c~~~~~-~~~l~~~~~~~~~~~~ 359 (869)
..+..+..++.+ +.|+|++| ||.|||++.|+ ..|+......+..
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N------------------------------~~~C~C~l~~~~~~~~~~~~~~~~~--- 224 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNN------------------------------PLECDCKLYQLFSHWQYRQLSSVMD--- 224 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSS------------------------------CEECCHHHHHHHHHHHHTTCHHHHT---
T ss_pred cCHHHhhhccHhhcceEEecCC------------------------------CccCCcCcHHHHHHHHHhcCCchhc---
Confidence 555666666553 45555555 89999999886 4565433211100
Q ss_pred ccCCCCCCCCCcccc
Q 002899 360 CLRQNFPCSAPADQY 374 (869)
Q Consensus 360 ~~~~~~~C~~p~~~~ 374 (869)
......|+.|....
T Consensus 225 -~~~~~~C~~p~~~~ 238 (361)
T 2xot_A 225 -FQEDLYCMHSKKLH 238 (361)
T ss_dssp -TGGGCEEESSSCCE
T ss_pred -cCcCCEeCCChHHc
Confidence 11345677776543
No 345
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.86 E-value=3.7e-21 Score=208.90 Aligned_cols=194 Identities=20% Similarity=0.248 Sum_probs=117.5
Q ss_pred CccccccccccccccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEE
Q 002899 123 NITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKL 202 (869)
Q Consensus 123 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 202 (869)
.+++|++|++++|.++. ++ .+..+++|++|+|++|++++..+ +..+++|++|+|++|++++. ..+..+++|+.|
T Consensus 39 ~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L 112 (308)
T 1h6u_A 39 DLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKTL 112 (308)
T ss_dssp HHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCEE
T ss_pred HcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCCEE
Confidence 34445555555554442 22 34444555555555555443222 44455555555555554432 234445555555
Q ss_pred EccCCcCCCCchHhhhcCCCCCEEEcCCCCCCCCcccccccccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCC
Q 002899 203 HIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTG 282 (869)
Q Consensus 203 ~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~ 282 (869)
+|++|++++.. .+..+++|+.|+|++|.++..+. .....+|+.|+|++|++++..+ +..+++|+.|+|++|++++
T Consensus 113 ~l~~n~l~~~~--~l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~ 187 (308)
T 1h6u_A 113 DLTSTQITDVT--PLAGLSNLQVLYLDLNQITNISP-LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISD 187 (308)
T ss_dssp ECTTSCCCCCG--GGTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC
T ss_pred ECCCCCCCCch--hhcCCCCCCEEECCCCccCcCcc-ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCc
Confidence 55555554322 14455555555555555544332 1122256666666777775444 8899999999999999996
Q ss_pred CCchhhhcCCCCCEEEeeCCcCCCCCchhhhccCCceeeeccCccCC
Q 002899 283 GIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFNSNKNVDISLNNFTWE 329 (869)
Q Consensus 283 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~l~ls~N~~~~~ 329 (869)
..+ +..+++|+.|+|++|++++..|-.-++.++.|++++|.++..
T Consensus 188 ~~~--l~~l~~L~~L~L~~N~l~~~~~l~~l~~L~~L~l~~N~i~~~ 232 (308)
T 1h6u_A 188 ISP--LASLPNLIEVHLKNNQISDVSPLANTSNLFIVTLTNQTITNQ 232 (308)
T ss_dssp CGG--GGGCTTCCEEECTTSCCCBCGGGTTCTTCCEEEEEEEEEECC
T ss_pred Chh--hcCCCCCCEEEccCCccCccccccCCCCCCEEEccCCeeecC
Confidence 554 899999999999999999777644467899999999977643
No 346
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.86 E-value=8e-22 Score=210.97 Aligned_cols=152 Identities=17% Similarity=0.069 Sum_probs=120.8
Q ss_pred HHHHHHhcCCCCCCeeeccCceEEEEEEEcCCcEEEEEEecccCc------------------hhhHHHHHHHHHHHhcC
Q 002899 631 RQIKAATNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSR------------------QGNREFVNEIGMISAQQ 692 (869)
Q Consensus 631 ~~i~~~t~~f~~~~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~~------------------~~~~~f~~E~~~l~~l~ 692 (869)
..+......|.+.+.||+|+||.||+|...+|+.||||.++.... .....+.+|++++++++
T Consensus 83 ~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~ 162 (282)
T 1zar_A 83 HRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ 162 (282)
T ss_dssp HHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc
Confidence 344444556777799999999999999997799999999864321 12456889999999998
Q ss_pred CCceeeEEeEEeeCceEEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCC
Q 002899 693 HPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSN 772 (869)
Q Consensus 693 H~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~N 772 (869)
| +++.+++.. +..++||||+++|+|.+ +.. .....++.|+++||+|||+.+ |+||||||+|
T Consensus 163 --~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~-----------~~~~~i~~qi~~~l~~lH~~g---iiHrDlkp~N 223 (282)
T 1zar_A 163 --G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV-----------ENPDEVLDMILEEVAKFYHRG---IVHGDLSQYN 223 (282)
T ss_dssp --T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC-----------SCHHHHHHHHHHHHHHHHHTT---EECSCCSTTS
T ss_pred --C-CCcCeEEec-cceEEEEEecCCCcHHH-cch-----------hhHHHHHHHHHHHHHHHHHCC---CEeCCCCHHH
Confidence 4 555554433 56799999999999988 421 124579999999999999998 9999999999
Q ss_pred EEEcCCCcEEEeecCCceeecCCCccccccccccccccchhhcc
Q 002899 773 VLLDKDLNAKISDFGLAKLYEEDKTHISTRIAGTIGYMAPEYAM 816 (869)
Q Consensus 773 ILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~ 816 (869)
||++ ++.+||+|||+++. +..|+|||++.
T Consensus 224 ILl~-~~~vkl~DFG~a~~--------------~~~~~a~e~l~ 252 (282)
T 1zar_A 224 VLVS-EEGIWIIDFPQSVE--------------VGEEGWREILE 252 (282)
T ss_dssp EEEE-TTEEEECCCTTCEE--------------TTSTTHHHHHH
T ss_pred EEEE-CCcEEEEECCCCeE--------------CCCCCHHHHHH
Confidence 9999 99999999999863 23578999874
No 347
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.86 E-value=1.3e-21 Score=216.55 Aligned_cols=231 Identities=16% Similarity=0.110 Sum_probs=173.4
Q ss_pred ceEecCC-------CCcceEEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCC-chhhccc-cce-EEEeecccC
Q 002899 44 NVTCDCS-------SATCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSF-SPQWASL-QLV-ELSVMGNRL 113 (869)
Q Consensus 44 ~v~C~~~-------~~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~-~~~~~~l-~L~-~L~Ls~N~l 113 (869)
.|.|+.. +...+++.|+|++|+|+...+.+|.++++|++|+|++|+|.+.+ +..|..+ +++ .+.+..|++
T Consensus 13 ~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l 92 (350)
T 4ay9_X 13 VFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNL 92 (350)
T ss_dssp EEEEESTTCCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTC
T ss_pred EEEecCCCCCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcc
Confidence 4677542 23457899999999999666678999999999999999997654 5678877 555 577888999
Q ss_pred CCCCchhhcCccccccccccccccCCCCCccccCCCCccEEEeec-ccccccCCccccCCC-CCCeEeccCCcCCCCCcc
Q 002899 114 SGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSS-NSFTGELPAELTKLT-NLNDLRISDNNFSGKIPE 191 (869)
Q Consensus 114 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~-N~i~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~~~ 191 (869)
+.+.|..|..+++|++|++++|+|+...+..+....++..|++.+ |++....+..|..+. .|+.|+|++|+|+.+.+.
T Consensus 93 ~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~ 172 (350)
T 4ay9_X 93 LYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNS 172 (350)
T ss_dssp CEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTT
T ss_pred cccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCCChh
Confidence 999999999999999999999999977777788888999999976 577766666777765 688999999999955444
Q ss_pred ccCCCCcccEEEccC-CcCCCCchHhhhcCCCCCEEEcCCCCCCCCcccccccccceEEEcccccCccCCCcccCCCCCc
Q 002899 192 FIGKWKKIQKLHIQG-SSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKL 270 (869)
Q Consensus 192 ~~~~l~~L~~L~L~~-N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L 270 (869)
.| ...+|+.|++++ |.++...+..|..+++|+.|+|++|+++. ..+..|.+ |
T Consensus 173 ~f-~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~-----------------------lp~~~~~~---L 225 (350)
T 4ay9_X 173 AF-NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHS-----------------------LPSYGLEN---L 225 (350)
T ss_dssp SS-TTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCC-----------------------CCSSSCTT---C
T ss_pred hc-cccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCc-----------------------cChhhhcc---c
Confidence 44 567899999975 67776666778888888888777555544 33333333 3
Q ss_pred CEEeccCC-CCCCCCchhhhcCCCCCEEEeeCCc
Q 002899 271 KNIDLSFN-NLTGGIPTTFEKLAKTNFMYLTGNK 303 (869)
Q Consensus 271 ~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~N~ 303 (869)
+.|.+.++ .++ .+| .+..+++|+.++++++.
T Consensus 226 ~~L~~l~~~~l~-~lP-~l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 226 KKLRARSTYNLK-KLP-TLEKLVALMEASLTYPS 257 (350)
T ss_dssp CEEECTTCTTCC-CCC-CTTTCCSCCEEECSCHH
T ss_pred hHhhhccCCCcC-cCC-CchhCcChhhCcCCCCc
Confidence 34443333 344 455 36777788888876553
No 348
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.85 E-value=1.8e-21 Score=227.22 Aligned_cols=217 Identities=19% Similarity=0.232 Sum_probs=112.7
Q ss_pred CCCEEEeecCcCCCCCchhhccccceEEEeecccCCCCCchhhcCccccccccccccccCCCCCccccCCCCccEEEeec
Q 002899 79 YLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSS 158 (869)
Q Consensus 79 ~L~~L~Ls~N~i~~~~~~~~~~l~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 158 (869)
+|+.|+|++|.|+++++..+ .+|+.|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. +.. +|++|+|++
T Consensus 60 ~L~~L~Ls~n~L~~lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~ 129 (571)
T 3cvr_A 60 QFSELQLNRLNLSSLPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDN 129 (571)
T ss_dssp TCSEEECCSSCCSCCCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCS
T ss_pred CccEEEeCCCCCCccCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCC
Confidence 56666666666665333222 34555555555555 233 234555555555555554 343 333 555555555
Q ss_pred ccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcCCCCchHhhhcCCCCCEEEcCCCCCCCCcc
Q 002899 159 NSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAF 238 (869)
Q Consensus 159 N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~ 238 (869)
|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. |. +
T Consensus 130 N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~----------------- 180 (571)
T 3cvr_A 130 NQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--E----------------- 180 (571)
T ss_dssp SCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--T-----------------
T ss_pred CcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--C-----------------
Confidence 55553 333 34555555555555553 332 34455555555555553 222 22 3
Q ss_pred cccccccceEEEcccccCccCCCcccCCCCCc-------CEEeccCCCCCCCCchhhhcCCCCCEEEeeCCcCCCCCchh
Q 002899 239 PKLDKMNLKTLILTKCLIHGEIPDYIGDMTKL-------KNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKY 311 (869)
Q Consensus 239 ~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L-------~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 311 (869)
+|+.|+|++|+|+ .+|. |.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.+|..
T Consensus 181 ------~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~ 249 (571)
T 3cvr_A 181 ------SLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRES 249 (571)
T ss_dssp ------TCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHH
T ss_pred ------CCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHH
Confidence 5555555566655 3333 332 45 77788887777 46666667777888888888887777776
Q ss_pred hhccC---------CceeeeccCccCCCCCCCCCCCCCccceecc
Q 002899 312 IFNSN---------KNVDISLNNFTWESSDPIECPRGSVNLVESY 347 (869)
Q Consensus 312 ~~~~l---------~~l~ls~N~~~~~~~~p~~C~c~~~~~~~~l 347 (869)
+.... -.++++.|.+... .+| .|+|...|+..+.
T Consensus 250 l~~l~~~~~~~~~~~~~~l~~~~~~~~-~~p-~~~~~~~Wl~~~~ 292 (571)
T 3cvr_A 250 LSQQTAQPDYHGPRIYFSMSDGQQNTL-HRP-LADAVTAWFPENK 292 (571)
T ss_dssp HHHHHHSCC---CEEECCC-----------C-CSHHHHTTCC---
T ss_pred HHHhhcCccccCCeeEEeecccccccc-ccc-chhhHHHHhhhhc
Confidence 62210 1234445544333 234 8999988876643
No 349
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.84 E-value=6.7e-21 Score=194.32 Aligned_cols=180 Identities=21% Similarity=0.232 Sum_probs=93.6
Q ss_pred EEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhhcCcccccccccccc
Q 002899 57 VTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGN 135 (869)
Q Consensus 57 ~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 135 (869)
+.+++++++++ .+|..+ .++|++|+|++|++++.++..|..+ +|++|+|++|+++++.+..|..+++|++|+|++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 35667777777 455444 3577788887777775555444444 4555555555555444444444555555555555
Q ss_pred ccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcCCCCchH
Q 002899 136 LFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPA 215 (869)
Q Consensus 136 ~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 215 (869)
+|++..+.. |.++++|++|+|++|+|++..+..|..+++|+.|+|++|++++..+.
T Consensus 87 ~l~~~~~~~------------------------~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 142 (208)
T 2o6s_A 87 QLQSLPNGV------------------------FDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDG 142 (208)
T ss_dssp CCCCCCTTT------------------------TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred cCCccCHhH------------------------hcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHH
Confidence 554333333 44444555555555555444444444555555555555555544444
Q ss_pred hhhcCCCCCEEEcCCCCCCCCcccccccccceEEEcccccCccCCCcccCCCCC
Q 002899 216 SISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTK 269 (869)
Q Consensus 216 ~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~ 269 (869)
.+..+++|+.|+|++|.+... ..+|+.|+++.|+++|.+|..++.++.
T Consensus 143 ~~~~l~~L~~L~l~~N~~~~~------~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 143 VFDRLTSLQYIWLHDNPWDCT------CPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp TTTTCTTCCEEECCSCCBCCC------TTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred HhccCCCccEEEecCCCeecC------CCCHHHHHHHHHhCCceeeccCccccC
Confidence 445555555555544432211 013455555566666666665555443
No 350
>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A*
Probab=99.83 E-value=4.4e-21 Score=188.85 Aligned_cols=158 Identities=22% Similarity=0.297 Sum_probs=120.8
Q ss_pred eeeeecCCccee-cCCceeccCccCc--ccccccccCcceeeeeccccccCCCCcccceecccccccccccchhhhhhhc
Q 002899 377 TLHINCGGAKIN-TGHTKYEADMEAR--GASMFYSSGQYWAFSSTGKFMDDDTDLDNYIRTNTSTLSKVSAVDLELYRTA 453 (869)
Q Consensus 377 ~~~~~c~~~~~~-~~~~~~~~d~~~~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (869)
.+.++|||+..+ ....++++|..-. |.+..+.+. . ......+.+++||+||
T Consensus 7 ~~~INcGg~~~~d~~gr~w~~D~~~~~~g~~~~~~~~----------~----------------~~~~~~~~~~~lY~Ta 60 (174)
T 2jwp_A 7 IWAVNAGGESHVDVHGIHYRKDPLEGRVGRASDYGMK----------L----------------PILRSNPEDQVLYQTE 60 (174)
T ss_dssp EEEEEETSSSEEETTTEEECSSCSSTTCCCCCCCCTT----------S----------------CCSSSCHHHHHTTTCC
T ss_pred EEEEECCCCCccCCCCCEEcCCcCcccCCcccccccc----------e----------------EecccCCCCchhhhhh
Confidence 467899998865 4567788875421 211100000 0 0011356788999999
Q ss_pred ccccccceeeeeeccCceEEEEEEeEEEEecCCCcccccCceeeEEEecceecccccchhhhcCCCCcceEEeeceeecc
Q 002899 454 RVSPLSLTYYGLCLGNGNYTVRLHFAEIIFKNDSTFNSLGKRIFDIYIQEKLVKKDFNIEDEAGGTGIPIVKNFPAEVTS 533 (869)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (869)
|+.|.+++|+..|..+|.|.|+||||||.++ ++|+|+|||||||+.++++|||.+++++ ..++.+.+...+++
T Consensus 61 R~~~~~~tY~f~v~~~G~Y~VrLhF~ei~~~------~~~~rvFdV~ing~~~l~~fdi~~~ag~-~~~~~~~~~~~v~~ 133 (174)
T 2jwp_A 61 RYNEDSFGYDIPIKEEGEYVLVLKFAEVYFA------QSQQKVFDVRVNGHTVVKDLDIFDRVGH-STAHDEIIPISIKK 133 (174)
T ss_dssp CCCCSCEEEEEECCSCEEEEEEEEEECCSCC------CSSSSCEEEEETTEEEEEEECHHHHHSS-SSCEEEEEEEEEET
T ss_pred ccCCCCeEEEEEeCCCeEEEEEEEEeccccC------CCCCeEeEEEECCEEeecCcCHHHhhCC-CeeEEEEEEEEEec
Confidence 9999999999999999999999999999765 3799999999999999999999999987 78999999999999
Q ss_pred ceeEEEEEEc-CCCccccCCC--CCCCCccccccccc
Q 002899 534 HTLKIHLYWA-GRGTTGIPLR--GTYGPLISAISVKS 567 (869)
Q Consensus 534 ~~~~~~~~~~-g~~~~~~p~~--~~~~pl~s~~~~~~ 567 (869)
++|+||..|+ ++|+..+... ..+.|.++++-+.+
T Consensus 134 ~~l~i~~~~~~~~g~L~I~f~p~~~~~a~inaIEI~~ 170 (174)
T 2jwp_A 134 GKLSVQGEVSTFTGKLSVEFVKGYYDNPKVCALFIMK 170 (174)
T ss_dssp TEEEETTEEEECCSEEEEEEECSSSCSSSEEEEEEES
T ss_pred CceeeeeeecccCCeEEEEEeccCCCCcEEEEEEEEe
Confidence 9999998886 5666554432 25678888776543
No 351
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.83 E-value=3.6e-22 Score=219.49 Aligned_cols=233 Identities=19% Similarity=0.226 Sum_probs=189.6
Q ss_pred ceEEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCC-Cchhhccc-cceEEEeecccCCCCCchhhcCcccccccc
Q 002899 54 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGS-FSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLS 131 (869)
Q Consensus 54 ~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~-~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 131 (869)
.+++.|++++|.+++..+. +..+++|++|+|++|.+++. .+..+..+ +|++|+|++|.+++..+..++.+++|++|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 4689999999999977665 66899999999999999865 67777777 899999999999988889999999999999
Q ss_pred cccc-ccCCC-CCccccCCCCccEEEeecc-ccccc-CCccccCCC-CCCeEeccCC--cCC-CCCccccCCCCcccEEE
Q 002899 132 IEGN-LFTGS-IPPDIRKLINLQKLILSSN-SFTGE-LPAELTKLT-NLNDLRISDN--NFS-GKIPEFIGKWKKIQKLH 203 (869)
Q Consensus 132 Ls~N-~l~~~-~~~~~~~l~~L~~L~Ls~N-~i~~~-~p~~~~~l~-~L~~L~Ls~N--~l~-~~~~~~~~~l~~L~~L~ 203 (869)
|++| .+++. ++..+..+++|++|+|++| .+++. ++..+..++ +|++|+|++| .++ +.++..+..+++|+.|+
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~ 228 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLD 228 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEE
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEe
Confidence 9999 67753 5666888999999999999 99864 577788899 9999999999 555 45677888999999999
Q ss_pred ccCCc-CCCCchHhhhcCCCCCEEEcCCCCCCCCcccccccccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCC
Q 002899 204 IQGSS-LEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTG 282 (869)
Q Consensus 204 L~~N~-l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~ 282 (869)
|++|. +++..+..+..+++|+.|+|++|. .+.......+..+++|+.|+|++| ++.
T Consensus 229 l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~----------------------~~~~~~~~~l~~~~~L~~L~l~~~-i~~ 285 (336)
T 2ast_B 229 LSDSVMLKNDCFQEFFQLNYLQHLSLSRCY----------------------DIIPETLLELGEIPTLKTLQVFGI-VPD 285 (336)
T ss_dssp CTTCTTCCGGGGGGGGGCTTCCEEECTTCT----------------------TCCGGGGGGGGGCTTCCEEECTTS-SCT
T ss_pred CCCCCcCCHHHHHHHhCCCCCCEeeCCCCC----------------------CCCHHHHHHHhcCCCCCEEeccCc-cCH
Confidence 99999 777778899999999988888664 111111224667899999999999 543
Q ss_pred CCchhhhcC-CCCCEEEeeCCcCCCCCchhhh
Q 002899 283 GIPTTFEKL-AKTNFMYLTGNKLTGPVPKYIF 313 (869)
Q Consensus 283 ~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~ 313 (869)
.. +..+ .+|..|++++|++++..|..+.
T Consensus 286 ~~---~~~l~~~l~~L~l~~n~l~~~~~~~~~ 314 (336)
T 2ast_B 286 GT---LQLLKEALPHLQINCSHFTTIARPTIG 314 (336)
T ss_dssp TC---HHHHHHHSTTSEESCCCSCCTTCSSCS
T ss_pred HH---HHHHHhhCcceEEecccCccccCCccc
Confidence 33 3333 2366677999999998887663
No 352
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.83 E-value=1.2e-20 Score=192.55 Aligned_cols=176 Identities=19% Similarity=0.198 Sum_probs=136.6
Q ss_pred eEEEeecccCCCCCchhhcCccccccccccccccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCC
Q 002899 104 VELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDN 183 (869)
Q Consensus 104 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N 183 (869)
+.++++++.++.+ |..+ .++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 10 ~~v~c~~~~l~~~-p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRTSV-PTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCSSC-CSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCccCC-CCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 3455666666533 3222 358889999999998776667889999999999999999776777889999999999999
Q ss_pred cCCCCCccccCCCCcccEEEccCCcCCCCchHhhhcCCCCCEEEcCCCCCCCCcccccccccceEEEcccccCccCCCcc
Q 002899 184 NFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDY 263 (869)
Q Consensus 184 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~ 263 (869)
++++..+..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|. |++..+..
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~-----------------------l~~~~~~~ 143 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQ-----------------------LKSVPDGV 143 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC-----------------------CSCCCTTT
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCc-----------------------cceeCHHH
Confidence 9998888889999999999999999998888889999988888777554 44445555
Q ss_pred cCCCCCcCEEeccCCCCCCCCchhhhcCCCCCEEEeeCCcCCCCCchhh
Q 002899 264 IGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYI 312 (869)
Q Consensus 264 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 312 (869)
|..+++|+.|+|++|.+.+ .+++|+.|+++.|+++|.+|..+
T Consensus 144 ~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~ 185 (208)
T 2o6s_A 144 FDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSA 185 (208)
T ss_dssp TTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTT
T ss_pred hccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccC
Confidence 6667777777777776663 33466777777777777777655
No 353
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.83 E-value=2.3e-20 Score=193.41 Aligned_cols=167 Identities=23% Similarity=0.300 Sum_probs=104.4
Q ss_pred cccccccccccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccC
Q 002899 127 LKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQG 206 (869)
Q Consensus 127 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 206 (869)
.+.++++++.++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|+...+..|..+++|+.|+|++
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 344555555555 3443332 4566666666666655555566666666666666666554445556666666666666
Q ss_pred CcCCCCchHhhhcCCCCCEEEcCCCCCCCCcccccccccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCCCch
Q 002899 207 SSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPT 286 (869)
Q Consensus 207 N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 286 (869)
|+|++..+..|..+++|+.|+|+ +|+|+ .+|..+..+++|+.|+|++|+|++..+.
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls-----------------------~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~ 153 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMC-----------------------CNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHG 153 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECC-----------------------SSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTT
T ss_pred CcCCccChhHhCcchhhCeEecc-----------------------CCccc-ccCcccccCCCCCEEECCCCcCCccCHH
Confidence 66665555555555555555444 33343 3455566777888888888888876667
Q ss_pred hhhcCCCCCEEEeeCCcCCCCCchhhhccCCceeeeccCccCCCCCCCCCCCC-CccceeccCCC
Q 002899 287 TFEKLAKTNFMYLTGNKLTGPVPKYIFNSNKNVDISLNNFTWESSDPIECPRG-SVNLVESYSSP 350 (869)
Q Consensus 287 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~l~ls~N~~~~~~~~p~~C~c~-~~~~~~~l~~~ 350 (869)
.|..+++|+.|+|++| ||.|+|. +.++..|+...
T Consensus 154 ~~~~l~~L~~L~l~~N------------------------------~~~c~c~~~~~l~~~~~~~ 188 (229)
T 3e6j_A 154 AFDRLSSLTHAYLFGN------------------------------PWDCECRDIMYLRNWVADH 188 (229)
T ss_dssp TTTTCTTCCEEECTTS------------------------------CBCTTBGGGHHHHHHHHHC
T ss_pred HHhCCCCCCEEEeeCC------------------------------CccCCcchhHHHHHHHHhC
Confidence 7777888888887777 7889996 77888887653
No 354
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.81 E-value=8.3e-20 Score=213.12 Aligned_cols=219 Identities=23% Similarity=0.332 Sum_probs=169.4
Q ss_pred CCCCCCCCCCCCC-CccccCCCCCCCCcce-EecCCCCcceEEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCC
Q 002899 17 DWNFGVDPCSQKG-NWELSSDDKKGFESNV-TCDCSSATCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSF 94 (869)
Q Consensus 17 ~W~~~~d~C~~~g-~w~~~~~~~~~~~~~v-~C~~~~~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~ 94 (869)
+|....++|.... .|. ++ .|.|. +++.|+|++|+|++ +|..+. ++|+.|+|++|.|+.++
T Consensus 35 ~W~~~~~~~~~~~~~~~-----------~l~~C~~~----~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~~ip 96 (571)
T 3cvr_A 35 KWEKQALPGENRNEAVS-----------LLKECLIN----QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALISLP 96 (571)
T ss_dssp HHHTTCCTTCCHHHHHH-----------HHHHHHHT----TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCSCCC
T ss_pred HHhccCCccccccchhh-----------hccccccC----CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCcccc
Confidence 4766677774211 122 45 67653 69999999999997 777663 89999999999999654
Q ss_pred chhhccccceEEEeecccCCCCCchhhcCccccccccccccccCCCCCccccCCCCccEEEeecccccccCCccccCCCC
Q 002899 95 SPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTN 174 (869)
Q Consensus 95 ~~~~~~l~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~ 174 (869)
. ...+|+.|+|++|+|++ +|. +.. +|++|+|++|+|++ +|. .+++|++|+|++|+|++ +|. .+++
T Consensus 97 -~--~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~ 161 (571)
T 3cvr_A 97 -E--LPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTS 161 (571)
T ss_dssp -C--CCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTT
T ss_pred -c--ccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCC
Confidence 1 12389999999999997 555 665 99999999999996 665 68999999999999996 665 5789
Q ss_pred CCeEeccCCcCCCCCccccCCCCcccEEEccCCcCCCCchHhhhcCCCCCEEEcCCCCCCCCcccccccccceEEEcccc
Q 002899 175 LNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKC 254 (869)
Q Consensus 175 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N 254 (869)
|++|+|++|+|++ +|. |. ++|+.|+|++|+|+ .+|. +.. +|. .....|+.|+|++|
T Consensus 162 L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~----------------~~~~~L~~L~Ls~N 217 (571)
T 3cvr_A 162 LEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNH----------------HSEETEIFFRCREN 217 (571)
T ss_dssp CCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC--------------------------CCEEEECCSS
T ss_pred cCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhh----------------cccccceEEecCCC
Confidence 9999999999997 666 66 99999999999999 4444 332 220 00113577888888
Q ss_pred cCccCCCcccCCCCCcCEEeccCCCCCCCCchhhhcCCC
Q 002899 255 LIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAK 293 (869)
Q Consensus 255 ~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 293 (869)
+|+ .+|..+..+++|+.|+|++|+|++.+|..+..+..
T Consensus 218 ~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 218 RIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp CCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHHH
T ss_pred cce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhhc
Confidence 888 46777777999999999999999999998887644
No 355
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.81 E-value=4.1e-20 Score=205.32 Aligned_cols=175 Identities=21% Similarity=0.211 Sum_probs=147.1
Q ss_pred EEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhc-cc-cceEEEeecccCCCCCchhhcCccccccccccc
Q 002899 57 VTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWA-SL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEG 134 (869)
Q Consensus 57 ~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~-~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 134 (869)
..+++++++|+ .+|..+. +.|+.|+|++|+|+++.+..|. .+ +|+.|+|++|+|+++.+..|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 47899999999 5777665 4689999999999998888886 55 899999999999988888899999999999999
Q ss_pred cccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCcccc---CCCCcccEEEccCCcCCC
Q 002899 135 NLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFI---GKWKKIQKLHIQGSSLEG 211 (869)
Q Consensus 135 N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~---~~l~~L~~L~L~~N~l~~ 211 (869)
|+|+...+..|..+++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..| ..+++|+.|+|++|+|+.
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 99997777788999999999999999998888889999999999999999997666666 568899999999999998
Q ss_pred CchHhhhcCCCC--CEEEcCCCCCC
Q 002899 212 PIPASISALTSL--TDLRISDLKGS 234 (869)
Q Consensus 212 ~~~~~l~~l~~L--~~L~L~~n~~~ 234 (869)
..+..+..++.+ +.|+|++|++.
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred cCHHHhhhccHhhcceEEecCCCcc
Confidence 777888888763 66666666543
No 356
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.80 E-value=7.4e-20 Score=188.37 Aligned_cols=151 Identities=21% Similarity=0.314 Sum_probs=103.0
Q ss_pred EEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhhcCcccccccccccc
Q 002899 57 VTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGN 135 (869)
Q Consensus 57 ~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 135 (869)
..+++++++++ .+|..+. ++|+.|+|++|+|+++.+..|..+ +|+.|+|++|+++++.|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 46888899988 5676654 678888888888887766666665 6777777777776666666666666777777776
Q ss_pred ccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcCC
Q 002899 136 LFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLE 210 (869)
Q Consensus 136 ~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 210 (869)
+|+...+..|..+++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|.+.
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 666544445566666666666666666665666666666666666666666555555666666666666666654
No 357
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.80 E-value=7.4e-20 Score=184.25 Aligned_cols=162 Identities=17% Similarity=0.273 Sum_probs=103.8
Q ss_pred EEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcCCCCchHhhhcCCCCCEEEcCCCC
Q 002899 153 KLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLK 232 (869)
Q Consensus 153 ~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~ 232 (869)
.+++++|+++ .+|..+. ++|++|+|++|+|+ .+|..|.++++|+.|+|++|.|++..+..|.++++|+.|+|+
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls--- 86 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILS--- 86 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC---
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECC---
Confidence 4455555554 3343332 35555555555555 344555555555555555555555555555555544444443
Q ss_pred CCCCcccccccccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCCCchhhhcCCCCCEEEeeCCcCCCCCchhh
Q 002899 233 GSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYI 312 (869)
Q Consensus 233 ~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 312 (869)
+|+|++..|..|..+++|+.|+|++|+|+...+..|..+++|+.|+|++|
T Consensus 87 --------------------~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N---------- 136 (193)
T 2wfh_A 87 --------------------YNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGAN---------- 136 (193)
T ss_dssp --------------------SSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSS----------
T ss_pred --------------------CCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCC----------
Confidence 45555556667778888888888888888766667888888888888887
Q ss_pred hccCCceeeeccCccCCCCCCCCCCCCCccceeccCCCCCCCCCCcCccCCCCCCCCCcccccceee
Q 002899 313 FNSNKNVDISLNNFTWESSDPIECPRGSVNLVESYSSPRNKLDKVHPCLRQNFPCSAPADQYHYTLH 379 (869)
Q Consensus 313 ~~~l~~l~ls~N~~~~~~~~p~~C~c~~~~~~~~l~~~~~~~~~~~~~~~~~~~C~~p~~~~~~~~~ 379 (869)
||.|||++.|+..|+...... .....|+.|+.++|+.+.
T Consensus 137 --------------------~~~C~c~l~~l~~~~~~~~~~--------~~~~~C~~P~~l~g~~l~ 175 (193)
T 2wfh_A 137 --------------------PLYCDCNMQWLSDWVKSEYKE--------PGIARCAGPGEMADKLLL 175 (193)
T ss_dssp --------------------CEECSGGGHHHHHHHHHSSCC--------CSCCBEEESGGGTTCBTT
T ss_pred --------------------CeecCCcCHHHHHHHHhccCC--------CCCcCcCCchHHCCCCcc
Confidence 888999999999998653211 134578888888776543
No 358
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.80 E-value=1.5e-19 Score=186.09 Aligned_cols=152 Identities=18% Similarity=0.260 Sum_probs=111.3
Q ss_pred EEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCc-hhhccc-cceEEEeecccCCCCCchhhcCccccccccccc
Q 002899 57 VTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFS-PQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEG 134 (869)
Q Consensus 57 ~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~-~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 134 (869)
+.+++++|+++ .+|..+. +.+++|+|++|+|++..+ ..|..+ +|+.|+|++|+|+++.+..|.++++|++|+|++
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 37899999998 4676664 356889999998887744 445555 677777777777776666777777777777777
Q ss_pred cccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcCCC
Q 002899 135 NLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEG 211 (869)
Q Consensus 135 N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 211 (869)
|+|++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|.+..
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 167 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNC 167 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEEC
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcC
Confidence 77776666667777777777777777776667777777777777777777776667777777777777777777664
No 359
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.79 E-value=1.1e-19 Score=183.01 Aligned_cols=164 Identities=18% Similarity=0.324 Sum_probs=109.0
Q ss_pred cEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCcc-ccCCCCcccEEEccCCcCCCCchHhhhcCCCCCEEEcCC
Q 002899 152 QKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPE-FIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISD 230 (869)
Q Consensus 152 ~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~ 230 (869)
++|++++|+++ .+|..+. .+|++|+|++|+|++..+. .|..+++|++|+|++|+|++..|..|.++++|+.|+|+
T Consensus 11 ~~l~~s~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls- 86 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG- 86 (192)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC-
T ss_pred CEEEcCCCCcC-cCccCCC--CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECC-
Confidence 44555555554 3444332 2555666666665544443 35556666666666666665555566665555555444
Q ss_pred CCCCCCcccccccccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCCCchhhhcCCCCCEEEeeCCcCCCCCch
Q 002899 231 LKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPK 310 (869)
Q Consensus 231 n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 310 (869)
+|+|++..+..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|
T Consensus 87 ----------------------~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N-------- 136 (192)
T 1w8a_A 87 ----------------------ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASN-------- 136 (192)
T ss_dssp ----------------------SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTC--------
T ss_pred ----------------------CCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCC--------
Confidence 45555566667788888999999999998888888888889998888888
Q ss_pred hhhccCCceeeeccCccCCCCCCCCCCCCCccceeccCCCCCCCCCCcCccCCCCCCCCCcccccceee
Q 002899 311 YIFNSNKNVDISLNNFTWESSDPIECPRGSVNLVESYSSPRNKLDKVHPCLRQNFPCSAPADQYHYTLH 379 (869)
Q Consensus 311 ~~~~~l~~l~ls~N~~~~~~~~p~~C~c~~~~~~~~l~~~~~~~~~~~~~~~~~~~C~~p~~~~~~~~~ 379 (869)
||.|+|++.|+..|+....... ....|+.|...++..+.
T Consensus 137 ----------------------~l~c~c~l~~~~~~l~~~~~~~--------~~~~C~~P~~l~~~~l~ 175 (192)
T 1w8a_A 137 ----------------------PFNCNCHLAWFAEWLRKKSLNG--------GAARCGAPSKVRDVQIK 175 (192)
T ss_dssp ----------------------CBCCSGGGHHHHHHHHHHCCSG--------GGCBBCSSTTTTTSBGG
T ss_pred ----------------------CccCcCcchHHHHHHHHcCCCC--------CCCCCCCChHHcCCChh
Confidence 7779999999999986532211 24578898888776544
No 360
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.79 E-value=2e-19 Score=193.45 Aligned_cols=172 Identities=22% Similarity=0.313 Sum_probs=104.3
Q ss_pred cCccccccccccccccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccE
Q 002899 122 TNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQK 201 (869)
Q Consensus 122 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 201 (869)
..+++|+.|++++|.++.. + .+..+++|++|+|++|++++..+ +.++++|++|+|++|++++ + ..+..+++|+.
T Consensus 43 ~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~ 116 (291)
T 1h6t_A 43 NELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-L-SSLKDLKKLKS 116 (291)
T ss_dssp HHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-G-GGGTTCTTCCE
T ss_pred hhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-C-hhhccCCCCCE
Confidence 4455566666666655532 2 35555666666666666654332 5556666666666666653 2 22556666666
Q ss_pred EEccCCcCCCCchHhhhcCCCCCEEEcCCCCCCCCcccccccccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCC
Q 002899 202 LHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLT 281 (869)
Q Consensus 202 L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~ 281 (869)
|+|++|++++. ..+..+++|+.|+|++|.++.. .......+|+.|+|++|+|++..+ +..+++|+.|+|++|+|+
T Consensus 117 L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~ 191 (291)
T 1h6t_A 117 LSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHIS 191 (291)
T ss_dssp EECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred EECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc-hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCC
Confidence 66666666543 3455566666666666555544 111122256666666777776554 778888888888888888
Q ss_pred CCCchhhhcCCCCCEEEeeCCcCCC
Q 002899 282 GGIPTTFEKLAKTNFMYLTGNKLTG 306 (869)
Q Consensus 282 ~~~p~~~~~l~~L~~L~Ls~N~l~~ 306 (869)
+ ++ .+..+++|+.|+|++|+++.
T Consensus 192 ~-l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 192 D-LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp B-CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred C-Ch-hhccCCCCCEEECcCCcccC
Confidence 5 34 37888888888888888764
No 361
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.78 E-value=2.2e-19 Score=211.74 Aligned_cols=190 Identities=20% Similarity=0.287 Sum_probs=133.5
Q ss_pred ceEEEeecccCCCCCchhhcCccccccccccccccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccC
Q 002899 103 LVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISD 182 (869)
Q Consensus 103 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~ 182 (869)
+..+.|..+.+....+ +..|++|+.|+|++|.|.. ++ .+..+++|+.|+|++|+|++..+ +..+++|+.|+|++
T Consensus 23 l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~ 96 (605)
T 1m9s_A 23 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDE 96 (605)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCS
T ss_pred HHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcC
Confidence 4444555555554332 4566777777777777763 33 46777777777777777775443 67777777777777
Q ss_pred CcCCCCCccccCCCCcccEEEccCCcCCCCchHhhhcCCCCCEEEcCCCCCCCCcccccccccceEEEcccccCccCCCc
Q 002899 183 NNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPD 262 (869)
Q Consensus 183 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~ 262 (869)
|+|++ + ..|..+++|+.|+|++|.|.+. ..+..+++|+.|+|++|.++.. .......+|+.|+|++|+|++..|
T Consensus 97 N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~~~~- 170 (605)
T 1m9s_A 97 NKIKD-L-SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP- 170 (605)
T ss_dssp SCCCC-C-TTSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC-GGGGSCTTCSEEECCSSCCCCCGG-
T ss_pred CCCCC-C-hhhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc-hhhcccCCCCEEECcCCcCCCchh-
Confidence 77764 2 2567777777777777777753 3477777777777777777665 222233368888888888887766
Q ss_pred ccCCCCCcCEEeccCCCCCCCCchhhhcCCCCCEEEeeCCcCCCC
Q 002899 263 YIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGP 307 (869)
Q Consensus 263 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 307 (869)
+..+++|+.|+|++|+|++. ..+..+++|+.|+|++|++++.
T Consensus 171 -l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 171 -LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp -GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECC
T ss_pred -hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCC
Confidence 88899999999999999864 3588899999999999998854
No 362
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.78 E-value=4.2e-19 Score=209.38 Aligned_cols=167 Identities=22% Similarity=0.355 Sum_probs=118.6
Q ss_pred eEEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhhcCcccccccccc
Q 002899 55 HVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIE 133 (869)
Q Consensus 55 ~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 133 (869)
.+..+.|..+.++..++ +..|++|+.|+|++|.|..+. .+..+ +|+.|+|++|+|++..+ +..+++|+.|+|+
T Consensus 22 ~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l~--~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls 95 (605)
T 1m9s_A 22 ETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSVQ--GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLD 95 (605)
T ss_dssp HHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCCT--TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECC
T ss_pred HHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCCCh--HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECc
Confidence 34556666677765544 567778888888888887653 34545 78888888888876554 7778888888888
Q ss_pred ccccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcCCCCc
Q 002899 134 GNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPI 213 (869)
Q Consensus 134 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 213 (869)
+|.|++ ++ .+..+++|++|+|++|+|++. ..+..+++|+.|+|++|+|++. ..|..+++|+.|+|++|.|.+..
T Consensus 96 ~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~ 169 (605)
T 1m9s_A 96 ENKIKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIV 169 (605)
T ss_dssp SSCCCC-CT-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCG
T ss_pred CCCCCC-Ch-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCch
Confidence 888774 33 677777888888888887742 3577777888888888887754 56777777888888888777665
Q ss_pred hHhhhcCCCCCEEEcCCCCCCC
Q 002899 214 PASISALTSLTDLRISDLKGSE 235 (869)
Q Consensus 214 ~~~l~~l~~L~~L~L~~n~~~~ 235 (869)
| +..+++|+.|+|++|.++.
T Consensus 170 ~--l~~l~~L~~L~Ls~N~i~~ 189 (605)
T 1m9s_A 170 P--LAGLTKLQNLYLSKNHISD 189 (605)
T ss_dssp G--GTTCTTCCEEECCSSCCCB
T ss_pred h--hccCCCCCEEECcCCCCCC
Confidence 5 7777777777776665544
No 363
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.78 E-value=3.2e-20 Score=224.28 Aligned_cols=261 Identities=21% Similarity=0.208 Sum_probs=103.8
Q ss_pred cHHHHHHHHHHhCCCCCCCCCCCCCCCCCccccCCCCCCCCcceEecCCCCcceEEEEeccCCCccccCCccccCCCCCC
Q 002899 2 PKKALKQIGRKLGKKDWNFGVDPCSQKGNWELSSDDKKGFESNVTCDCSSATCHVVTIALKAQNLTGTLPTELSKLRYLK 81 (869)
Q Consensus 2 ~~~~l~~~~~~l~~~~W~~~~d~C~~~g~w~~~~~~~~~~~~~v~C~~~~~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~ 81 (869)
++++|.++...+....|.... .|...+.+. ..+.++.+ ..++++.|+|.++++.. ++.. .|+
T Consensus 133 ~~~~l~~~~~~~~~~~~~~~~-------~~~~~~~~~-~~~~~~~~----s~~~~~~l~L~~n~~~~-~~~~-----~l~ 194 (727)
T 4b8c_D 133 TKQALMEMADTLTDSKTAKKQ-------QPTGDSTPS-GTATNSAV----STPLTPKIELFANGKDE-ANQA-----LLQ 194 (727)
T ss_dssp CCHHHHHHHHHHHHHHTTC-------------------------------------------------------------
T ss_pred chhhhhhhhhhcccccCcccC-------CCcCCCCcc-ccCCCcee----cCCccceEEeeCCCCCc-chhh-----Hhh
Confidence 578999999888776664321 122111111 11222333 24679999999999885 3333 355
Q ss_pred EEEeecCcCCCCCchhhccccceEEEeecccCCCCCchhhcCccccccccccccccCCCCCccccCCCCccEEEeecccc
Q 002899 82 QLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSF 161 (869)
Q Consensus 82 ~L~Ls~N~i~~~~~~~~~~l~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i 161 (869)
.++|+.|.|. .++++.|++. ..++.+..++.|+.|+|++|.|. .+|..+..+++|++|+|++|+|
T Consensus 195 ~l~Ls~~~i~-------------~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l 259 (727)
T 4b8c_D 195 HKKLSQYSID-------------EDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSL 259 (727)
T ss_dssp -----------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCC
T ss_pred cCccCccccc-------------Ccccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcC
Confidence 6667766655 3345555555 55666666677777777777666 5555556666777777777776
Q ss_pred cccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcCCCCchHhhhcCCCCCEEEcCCCCCCCCccccc
Q 002899 162 TGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKL 241 (869)
Q Consensus 162 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~ 241 (869)
+ .+|..|.+|++|++|+|++|+|+ .+|..|+.+++|++|+|++|.|+ .+|..|.++++|+.|+|++|.++......+
T Consensus 260 ~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~ 336 (727)
T 4b8c_D 260 T-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKIL 336 (727)
T ss_dssp S-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHH
T ss_pred c-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHH
Confidence 6 66666666777777777777766 55666666777777777777665 445556666666666666666655444333
Q ss_pred ccc--cceEEEcccccCccCCCcccCCCCCcCEEeccCC--------CCCCCCchhhhcCCCCCEEEeeCCcC
Q 002899 242 DKM--NLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFN--------NLTGGIPTTFEKLAKTNFMYLTGNKL 304 (869)
Q Consensus 242 ~~~--~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N--------~l~~~~p~~~~~l~~L~~L~Ls~N~l 304 (869)
... .+..|+|++|.+++.+|.. |+.|+++.| .|.+..+..+..+.++....++.|-+
T Consensus 337 ~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil 403 (727)
T 4b8c_D 337 TEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTL 403 (727)
T ss_dssp HHHHHHHHHHHHHHCCCCCCCCCC-----------------------------------------------CC
T ss_pred hhcchhhhHHhhccCcccCcCccc------cceeEeecccccccccCCccccccchhhcccccceeeeecccc
Confidence 322 2234567788887766643 455666666 33333333444444555555555544
No 364
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.77 E-value=1.8e-20 Score=222.32 Aligned_cols=187 Identities=13% Similarity=0.073 Sum_probs=107.9
Q ss_pred ccccCCCCccEEEeecccccccCC-ccccCCCCCCeEeccC-----------------------------------CcCC
Q 002899 143 PDIRKLINLQKLILSSNSFTGELP-AELTKLTNLNDLRISD-----------------------------------NNFS 186 (869)
Q Consensus 143 ~~~~~l~~L~~L~Ls~N~i~~~~p-~~~~~l~~L~~L~Ls~-----------------------------------N~l~ 186 (869)
..+..+++|++|+|++|.+++... ..+..+++|++|+|++ |.++
T Consensus 287 ~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~ 366 (592)
T 3ogk_B 287 ILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVS 366 (592)
T ss_dssp GGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCC
T ss_pred HHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccC
Confidence 344556678888888777654322 2234555555555542 3333
Q ss_pred CCC-ccccCCCCcccEEEccCCcCCCCchHhhhc-CCCCCEEEcC----CCCCCCCccc------ccccccceEEEcccc
Q 002899 187 GKI-PEFIGKWKKIQKLHIQGSSLEGPIPASISA-LTSLTDLRIS----DLKGSESAFP------KLDKMNLKTLILTKC 254 (869)
Q Consensus 187 ~~~-~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~-l~~L~~L~L~----~n~~~~~~~~------~~~~~~L~~L~Ls~N 254 (869)
+.. +..+..+++|+.|+++.|.+++..+..+.. +++|+.|+|+ .|.++..+.. .....+|+.|+|+.|
T Consensus 367 ~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~ 446 (592)
T 3ogk_B 367 QRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLR 446 (592)
T ss_dssp HHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECC
T ss_pred HHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecC
Confidence 211 111233555555555555555544444444 6666666664 4445443211 111236777777643
Q ss_pred --cCccCCCcccC-CCCCcCEEeccCCCCCC-CCchhhhcCCCCCEEEeeCCcCCCCCchhh---hccCCceeeeccCcc
Q 002899 255 --LIHGEIPDYIG-DMTKLKNIDLSFNNLTG-GIPTTFEKLAKTNFMYLTGNKLTGPVPKYI---FNSNKNVDISLNNFT 327 (869)
Q Consensus 255 --~i~~~~p~~~~-~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~---~~~l~~l~ls~N~~~ 327 (869)
.+++..+..+. .+++|+.|+|++|++++ .++..+..+++|+.|+|++|++++.....+ .+.++.|+|++|+++
T Consensus 447 ~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it 526 (592)
T 3ogk_B 447 QGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRAS 526 (592)
T ss_dssp GGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCC
T ss_pred CCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCC
Confidence 35544444443 47888888888888875 344556778888888888888765533333 457888888888776
Q ss_pred CC
Q 002899 328 WE 329 (869)
Q Consensus 328 ~~ 329 (869)
..
T Consensus 527 ~~ 528 (592)
T 3ogk_B 527 MT 528 (592)
T ss_dssp TT
T ss_pred HH
Confidence 43
No 365
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.77 E-value=1.2e-18 Score=187.51 Aligned_cols=193 Identities=16% Similarity=0.226 Sum_probs=160.9
Q ss_pred ccccccccccccccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEE
Q 002899 124 ITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLH 203 (869)
Q Consensus 124 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 203 (869)
+.++..+.+..+.+++.. .+..+++|++|++++|.+... + .+..+++|++|+|++|++++..+ +..+++|+.|+
T Consensus 23 l~~~~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~ 96 (291)
T 1h6t_A 23 FAETIKDNLKKKSVTDAV--TQNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLF 96 (291)
T ss_dssp HHHHHHHHTTCSCTTSEE--CHHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred HHHHHHHHhcCCCccccc--chhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEE
Confidence 455667778888877443 356789999999999999844 4 48889999999999999997655 99999999999
Q ss_pred ccCCcCCCCchHhhhcCCCCCEEEcCCCCCCCCcccccccccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCC
Q 002899 204 IQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGG 283 (869)
Q Consensus 204 L~~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 283 (869)
|++|.+++. ..+..+++|+.|+|++|.++..+ ......+|+.|+|++|+|++. ..+..+++|+.|+|++|+|++.
T Consensus 97 l~~n~l~~~--~~l~~l~~L~~L~L~~n~i~~~~-~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~ 171 (291)
T 1h6t_A 97 LDENKVKDL--SSLKDLKKLKSLSLEHNGISDIN-GLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDI 171 (291)
T ss_dssp CCSSCCCCG--GGGTTCTTCCEEECTTSCCCCCG-GGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCC
T ss_pred CCCCcCCCC--hhhccCCCCCEEECCCCcCCCCh-hhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccc
Confidence 999999863 34999999999999999998863 233344899999999999976 6789999999999999999976
Q ss_pred CchhhhcCCCCCEEEeeCCcCCCCCchhhhccCCceeeeccCccCC
Q 002899 284 IPTTFEKLAKTNFMYLTGNKLTGPVPKYIFNSNKNVDISLNNFTWE 329 (869)
Q Consensus 284 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~l~ls~N~~~~~ 329 (869)
.| +..+++|+.|+|++|++++..+-.-+..++.|++++|+++..
T Consensus 172 ~~--l~~l~~L~~L~L~~N~i~~l~~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 172 VP--LAGLTKLQNLYLSKNHISDLRALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp GG--GTTCTTCCEEECCSSCCCBCGGGTTCTTCSEEEEEEEEEECC
T ss_pred hh--hcCCCccCEEECCCCcCCCChhhccCCCCCEEECcCCcccCC
Confidence 55 999999999999999999643222266889999999977653
No 366
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.77 E-value=1.8e-18 Score=179.11 Aligned_cols=151 Identities=22% Similarity=0.304 Sum_probs=117.1
Q ss_pred EEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhhcCccccccccccccc
Q 002899 58 TIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNL 136 (869)
Q Consensus 58 ~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 136 (869)
.+++++++++ .+|..+. ++|++|+|++|.|++..+..|..+ +|++|+|++|+|+.+.+..|..+++|++|+|++|+
T Consensus 23 ~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~ 99 (229)
T 3e6j_A 23 TVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQ 99 (229)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCc
Confidence 4666777887 6666554 889999999999988877777776 78888888888877766777888888888888888
Q ss_pred cCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcCCCC
Q 002899 137 FTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGP 212 (869)
Q Consensus 137 l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 212 (869)
|++..+..|..+++|++|+|++|+|+ .+|..+..+++|++|+|++|+|++..+..|..+++|+.|+|++|.+...
T Consensus 100 l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 100 LTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTT
T ss_pred CCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCC
Confidence 88666666777888888888888887 6677777778888888888888766666777777777777777777653
No 367
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.75 E-value=4.5e-20 Score=216.34 Aligned_cols=189 Identities=18% Similarity=0.205 Sum_probs=121.8
Q ss_pred cCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeeccc-------------CCCCCchhhcCcccccccc-ccccccCC
Q 002899 75 SKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNR-------------LSGPFPKVLTNITTLKNLS-IEGNLFTG 139 (869)
Q Consensus 75 ~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~-------------l~~~~~~~~~~l~~L~~L~-Ls~N~l~~ 139 (869)
..+++|+.|+|++|.|+ .+|..+..+ +|+.|++++|. +.+..|..++.+++|+.|+ ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~- 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD- 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-
Confidence 45667777777777776 335555555 66666665553 4445566666666666666 5555432
Q ss_pred CCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcCCCCchHhhhc
Q 002899 140 SIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISA 219 (869)
Q Consensus 140 ~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~ 219 (869)
+|+.+.+++|.|+...+ ..|+.|+|++|+|++ +|. |+.+++|+.|+|++|.|+ .+|..++.
T Consensus 424 ----------~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 484 (567)
T 1dce_A 424 ----------DLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAA 484 (567)
T ss_dssp ----------HHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGG
T ss_pred ----------hhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhc
Confidence 45555566666653221 247888888888885 455 888888888888888888 66778888
Q ss_pred CCCCCEEEcCCCCCCCCcccccccccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCCC-chhhhcCCCCCEEE
Q 002899 220 LTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGI-PTTFEKLAKTNFMY 298 (869)
Q Consensus 220 l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~ 298 (869)
+++|+.|+|++|.++. +| .++.+++|+.|+|++|+|++.. |..|..+++|+.|+
T Consensus 485 l~~L~~L~Ls~N~l~~------------------------lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~ 539 (567)
T 1dce_A 485 LRCLEVLQASDNALEN------------------------VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLN 539 (567)
T ss_dssp CTTCCEEECCSSCCCC------------------------CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEE
T ss_pred CCCCCEEECCCCCCCC------------------------Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEE
Confidence 8877777776554443 23 4556666666666666666554 66666666666666
Q ss_pred eeCCcCCCCCc
Q 002899 299 LTGNKLTGPVP 309 (869)
Q Consensus 299 Ls~N~l~~~~p 309 (869)
|++|+|++..|
T Consensus 540 L~~N~l~~~~~ 550 (567)
T 1dce_A 540 LQGNSLCQEEG 550 (567)
T ss_dssp CTTSGGGGSSS
T ss_pred ecCCcCCCCcc
Confidence 66666665544
No 368
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.74 E-value=8e-18 Score=169.96 Aligned_cols=154 Identities=18% Similarity=0.270 Sum_probs=112.6
Q ss_pred hcCccccccccccccccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCccc
Q 002899 121 LTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQ 200 (869)
Q Consensus 121 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 200 (869)
...+++|+.|+|++|.++ .+| .+..+++|++|++++|.++. +..+..+++|++|+|++|++++..+..|..+++|+
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 356777888888888777 445 57777888888888886652 33677788888888888888776777788888888
Q ss_pred EEEccCCcCCCCchHhhhcCCCCCEEEcCCCC-CCCCcccccccccceEEEcccccCccCCCcccCCCCCcCEEeccCCC
Q 002899 201 KLHIQGSSLEGPIPASISALTSLTDLRISDLK-GSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNN 279 (869)
Q Consensus 201 ~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~-~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~ 279 (869)
.|+|++|.+++..+..+..+++|+.|+|++|. +.. +| .+..+++|+.|+|++|+
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~------------------------~~-~l~~l~~L~~L~l~~n~ 170 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITD------------------------IM-PLKTLPELKSLNIQFDG 170 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCC------------------------CG-GGGGCSSCCEEECTTBC
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccc------------------------cH-hhcCCCCCCEEECCCCC
Confidence 88888888887777788888877777776554 322 22 46677888888888888
Q ss_pred CCCCCchhhhcCCCCCEEEeeCCcCC
Q 002899 280 LTGGIPTTFEKLAKTNFMYLTGNKLT 305 (869)
Q Consensus 280 l~~~~p~~~~~l~~L~~L~Ls~N~l~ 305 (869)
+++. + .+..+++|+.|++++|++.
T Consensus 171 i~~~-~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 171 VHDY-R-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp CCCC-T-TGGGCSSCCEEEECBC---
T ss_pred CcCh-H-HhccCCCCCEEEeeCcccC
Confidence 8853 3 6788888888888888775
No 369
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.73 E-value=7.3e-18 Score=177.86 Aligned_cols=136 Identities=17% Similarity=0.148 Sum_probs=105.4
Q ss_pred CCCCCeeeccCceEEEEEEE-cCCcE--EEEEEecccCch------------------------hhHHHHHHHHHHHhcC
Q 002899 640 FDPANKVGEGGFGSVYKGIL-SDGTV--IAVKQLSSKSRQ------------------------GNREFVNEIGMISAQQ 692 (869)
Q Consensus 640 f~~~~~IG~G~fG~Vyka~~-~~g~~--VAvK~~~~~~~~------------------------~~~~f~~E~~~l~~l~ 692 (869)
|.+.+.||+|+||.||+|.. .+|+. ||||+++..... ....+.+|++++.+++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 56778999999999999998 68888 999987543111 1135788999999998
Q ss_pred CCce--eeEEeEEeeCceEEEEEEeccC-C----chhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHH-hcCCCCeE
Q 002899 693 HPNL--VKLYGCCVEGNQLLLVYEYMKN-N----CLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLH-EDSRIKIV 764 (869)
Q Consensus 693 H~nI--v~l~~~~~~~~~~~lV~E~~~~-g----sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH-~~~~~~ii 764 (869)
|+++ ..++++ +..++||||+.+ | +|.+.... .++..+..++.|++.||.||| +.+ |+
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~--------~~~~~~~~i~~qi~~~l~~lH~~~g---iv 193 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE--------LKELDVEGIFNDVVENVKRLYQEAE---LV 193 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG--------GGGSCHHHHHHHHHHHHHHHHHTSC---EE
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc--------cChHHHHHHHHHHHHHHHHHHHHCC---EE
Confidence 8764 344432 356899999953 4 55544321 124567889999999999999 887 99
Q ss_pred EcCCCCCCEEEcCCCcEEEeecCCceee
Q 002899 765 HRDIKTSNVLLDKDLNAKISDFGLAKLY 792 (869)
Q Consensus 765 H~Dlk~~NILl~~~~~~kl~DFGla~~~ 792 (869)
||||||+|||++. .++|+|||+|...
T Consensus 194 HrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 194 HADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred eCCCCHHHEEEcC--cEEEEECcccccC
Confidence 9999999999998 9999999999754
No 370
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.72 E-value=5.8e-18 Score=179.18 Aligned_cols=168 Identities=21% Similarity=0.324 Sum_probs=91.8
Q ss_pred cceEEEeecccCCCCCchhhcCccccccccccccccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEecc
Q 002899 102 QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRIS 181 (869)
Q Consensus 102 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls 181 (869)
++..+++++|.+++.. .+..+++|++|+|++|.|+ .++ .+..+++|++|+|++|+|++..+ +..+++|++|+|+
T Consensus 20 ~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~ 93 (263)
T 1xeu_A 20 NAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVN 93 (263)
T ss_dssp HHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECC
T ss_pred HHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECC
Confidence 3444555555555332 3455555555555555555 233 45555555555555555553322 5555555555555
Q ss_pred CCcCCCCCccccCCCCcccEEEccCCcCCCCchHhhhcCCCCCEEEcCCCCCCCCcccccccccceEEEcccccCccCCC
Q 002899 182 DNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIP 261 (869)
Q Consensus 182 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p 261 (869)
+|++++. +.. .. ++|+.|+|++|++++. ..+..+++|+.| +|++|+|++. +
T Consensus 94 ~N~l~~l-~~~-~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L-----------------------~Ls~N~i~~~-~ 144 (263)
T 1xeu_A 94 RNRLKNL-NGI-PS-ACLSRLFLDNNELRDT--DSLIHLKNLEIL-----------------------SIRNNKLKSI-V 144 (263)
T ss_dssp SSCCSCC-TTC-CC-SSCCEEECCSSCCSBS--GGGTTCTTCCEE-----------------------ECTTSCCCBC-G
T ss_pred CCccCCc-Ccc-cc-CcccEEEccCCccCCC--hhhcCcccccEE-----------------------ECCCCcCCCC-h
Confidence 5555532 221 11 5555555555555532 124444444444 4445555543 2
Q ss_pred cccCCCCCcCEEeccCCCCCCCCchhhhcCCCCCEEEeeCCcCCCC
Q 002899 262 DYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGP 307 (869)
Q Consensus 262 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 307 (869)
.+..+++|+.|+|++|+|++. ..+..+++|+.|+|++|++++.
T Consensus 145 -~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 145 -MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp -GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred -HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 466777788888888887755 5577777788888888877643
No 371
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.72 E-value=5.4e-19 Score=209.63 Aligned_cols=175 Identities=10% Similarity=0.132 Sum_probs=129.6
Q ss_pred cCCCCccEEEee-----------cccccccCC-ccccCCCCCCeEeccCCcCCCCCccccCC-CCcccEEEcc----CCc
Q 002899 146 RKLINLQKLILS-----------SNSFTGELP-AELTKLTNLNDLRISDNNFSGKIPEFIGK-WKKIQKLHIQ----GSS 208 (869)
Q Consensus 146 ~~l~~L~~L~Ls-----------~N~i~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~L~----~N~ 208 (869)
..+++|++|+|+ .|.+++... ..+..+++|++|+++.|++++..+..+.. +++|+.|+|+ .|.
T Consensus 339 ~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~ 418 (592)
T 3ogk_B 339 QYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREER 418 (592)
T ss_dssp HHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSC
T ss_pred HhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCcc
Confidence 345667777777 355553322 22356899999999999999877777766 8999999996 788
Q ss_pred CCCC-----chHhhhcCCCCCEEEcCCCC--CCCCcccccc--cccceEEEcccccCccC-CCcccCCCCCcCEEeccCC
Q 002899 209 LEGP-----IPASISALTSLTDLRISDLK--GSESAFPKLD--KMNLKTLILTKCLIHGE-IPDYIGDMTKLKNIDLSFN 278 (869)
Q Consensus 209 l~~~-----~~~~l~~l~~L~~L~L~~n~--~~~~~~~~~~--~~~L~~L~Ls~N~i~~~-~p~~~~~l~~L~~L~Ls~N 278 (869)
+++. ++..+.++++|+.|+|+.+. ++...+..+. ..+|+.|+|++|++++. ++..+..+++|+.|+|++|
T Consensus 419 l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n 498 (592)
T 3ogk_B 419 ITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGC 498 (592)
T ss_dssp CSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESC
T ss_pred ccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCC
Confidence 8864 55668889999999998644 4444333332 34799999999999863 4556688999999999999
Q ss_pred CCCCC-CchhhhcCCCCCEEEeeCCcCCCCCchhhhccCCcee
Q 002899 279 NLTGG-IPTTFEKLAKTNFMYLTGNKLTGPVPKYIFNSNKNVD 320 (869)
Q Consensus 279 ~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~l~ 320 (869)
.+++. ++..+..+++|++|+|++|++++.....+...+..+.
T Consensus 499 ~l~~~~~~~~~~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~ 541 (592)
T 3ogk_B 499 CFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWN 541 (592)
T ss_dssp CCBHHHHHHHHHHCSSCCEEEEESCBCCTTCTTGGGGCCTTEE
T ss_pred CCcHHHHHHHHHhcCccCeeECcCCcCCHHHHHHHHHhCCCcE
Confidence 98754 3444568999999999999999775555544444433
No 372
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.72 E-value=6.8e-20 Score=214.82 Aligned_cols=105 Identities=13% Similarity=0.137 Sum_probs=82.8
Q ss_pred CCEEEcCCCCCCCCcccccccccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCCCchhhhcCCCCCEEEeeCC
Q 002899 223 LTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGN 302 (869)
Q Consensus 223 L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 302 (869)
|+.|+|++|.++..+. .....+|+.|+|++|+|+ .+|..|+.+++|+.|+|++|+|++ +| .+..+++|+.|+|++|
T Consensus 443 L~~L~Ls~n~l~~lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N 518 (567)
T 1dce_A 443 VRVLHLAHKDLTVLCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNN 518 (567)
T ss_dssp CSEEECTTSCCSSCCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSS
T ss_pred ceEEEecCCCCCCCcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCC
Confidence 5555555555554332 222235666667788888 678899999999999999999996 67 8999999999999999
Q ss_pred cCCCCC-chhh--hccCCceeeeccCccCCCC
Q 002899 303 KLTGPV-PKYI--FNSNKNVDISLNNFTWESS 331 (869)
Q Consensus 303 ~l~~~~-p~~~--~~~l~~l~ls~N~~~~~~~ 331 (869)
+|++.. |..+ +..|+.|+|++|+++..++
T Consensus 519 ~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 519 RLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp CCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred CCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 999887 8887 5689999999999987654
No 373
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.71 E-value=4.7e-17 Score=164.27 Aligned_cols=149 Identities=20% Similarity=0.216 Sum_probs=105.2
Q ss_pred cceEEEeecccCCCCCchhhcCccccccccccccccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEecc
Q 002899 102 QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRIS 181 (869)
Q Consensus 102 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls 181 (869)
+|+.|+|++|.++ .+| .+..+++|++|+|++|.++ .+..+..+++|++|+|++|++++..+..+..+++|++|+|+
T Consensus 45 ~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls 120 (197)
T 4ezg_A 45 SLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDIS 120 (197)
T ss_dssp TCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECC
T ss_pred CccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEec
Confidence 5667777777776 333 4777788888888888665 23467778888888888888887677778888888888888
Q ss_pred CCcCCCCCccccCCCCcccEEEccCCc-CCCCchHhhhcCCCCCEEEcCCCCCCCCcccccccccceEEEcccccCccCC
Q 002899 182 DNNFSGKIPEFIGKWKKIQKLHIQGSS-LEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEI 260 (869)
Q Consensus 182 ~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~ 260 (869)
+|++++..+..|..+++|++|+|++|. ++ .++ .+..+++|+.|++++|.++..
T Consensus 121 ~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~------------------------ 174 (197)
T 4ezg_A 121 HSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDY------------------------ 174 (197)
T ss_dssp SSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCC------------------------
T ss_pred CCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcCh------------------------
Confidence 888887777778888888888888887 55 344 577777777777665544331
Q ss_pred CcccCCCCCcCEEeccCCCCC
Q 002899 261 PDYIGDMTKLKNIDLSFNNLT 281 (869)
Q Consensus 261 p~~~~~l~~L~~L~Ls~N~l~ 281 (869)
+ .+..+++|+.|++++|+|.
T Consensus 175 ~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 175 R-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp T-TGGGCSSCCEEEECBC---
T ss_pred H-HhccCCCCCEEEeeCcccC
Confidence 1 3556677777777777765
No 374
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.71 E-value=7.5e-18 Score=178.34 Aligned_cols=170 Identities=17% Similarity=0.238 Sum_probs=138.9
Q ss_pred CCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhhcCccccccccccccccCCCCCccccCCCCccEE
Q 002899 76 KLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKL 154 (869)
Q Consensus 76 ~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 154 (869)
++.++..++|++|.+++.. .+..+ +|+.|+|++|+++.. + .+..+++|++|+|++|+|++..+ +..+++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQSL-A-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcccc-h-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 4667888999999998765 35555 899999999999954 4 68999999999999999996544 9999999999
Q ss_pred EeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcCCCCchHhhhcCCCCCEEEcCCCCCC
Q 002899 155 ILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGS 234 (869)
Q Consensus 155 ~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~~~ 234 (869)
+|++|++++ +|. +.. ++|++|+|++|++++. ..+..+++|+.|+|++|++++. + .+..+++|+.|+|++|+++
T Consensus 91 ~L~~N~l~~-l~~-~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 91 SVNRNRLKN-LNG-IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp ECCSSCCSC-CTT-CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCC
T ss_pred ECCCCccCC-cCc-ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCc
Confidence 999999995 443 333 8999999999999964 3699999999999999999965 3 6888888888877755544
Q ss_pred CCcccccccccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCC
Q 002899 235 ESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGG 283 (869)
Q Consensus 235 ~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 283 (869)
+. ..+..+++|+.|+|++|++++.
T Consensus 164 -----------------------~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 164 -----------------------NT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp -----------------------BC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred -----------------------ch--HHhccCCCCCEEeCCCCcccCC
Confidence 33 4466778888888888888754
No 375
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.67 E-value=7.1e-18 Score=200.00 Aligned_cols=149 Identities=19% Similarity=0.192 Sum_probs=85.5
Q ss_pred ceEEEEeccCC-Ccccc-CCccccCCCCCCEEEeecCcCCCCCchhhccc-----cceEEEeecccCCCCCchh----hc
Q 002899 54 CHVVTIALKAQ-NLTGT-LPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-----QLVELSVMGNRLSGPFPKV----LT 122 (869)
Q Consensus 54 ~~v~~L~l~~~-~l~~~-~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-----~L~~L~Ls~N~l~~~~~~~----~~ 122 (869)
.+++.|+|.+| .++.. ++..+.++++|++|+|++|.+++..+..+..+ +|++|+|++|. ....... +.
T Consensus 130 ~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~-~~~~~~~l~~l~~ 208 (594)
T 2p1m_B 130 KNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLA-SEVSFSALERLVT 208 (594)
T ss_dssp TTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCC-SCCCHHHHHHHHH
T ss_pred CCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccC-CcCCHHHHHHHHH
Confidence 46888888888 55543 34445578888888888888776555444322 67777777776 2121222 23
Q ss_pred Ccccccccccccc-c-------------------------------------------------cCCC----CCccccCC
Q 002899 123 NITTLKNLSIEGN-L-------------------------------------------------FTGS----IPPDIRKL 148 (869)
Q Consensus 123 ~l~~L~~L~Ls~N-~-------------------------------------------------l~~~----~~~~~~~l 148 (869)
.+++|++|+|++| . +... ++..+..+
T Consensus 209 ~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~~~~l~~~~~~~ 288 (594)
T 2p1m_B 209 RCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVC 288 (594)
T ss_dssp HCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBTCCGGGGGGGHHHH
T ss_pred hCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcccchhhHHHHHHhh
Confidence 3466777777665 1 1111 11112245
Q ss_pred CCccEEEeecccccccCCc-cccCCCCCCeEeccCCcCCCC-CccccCCCCcccEEEc
Q 002899 149 INLQKLILSSNSFTGELPA-ELTKLTNLNDLRISDNNFSGK-IPEFIGKWKKIQKLHI 204 (869)
Q Consensus 149 ~~L~~L~Ls~N~i~~~~p~-~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~L 204 (869)
++|++|+|++|.+++.... .+..+++|++|++++| ++.. ++.....+++|++|+|
T Consensus 289 ~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L 345 (594)
T 2p1m_B 289 SRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRV 345 (594)
T ss_dssp TTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEE
T ss_pred CCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEE
Confidence 7888888888886643222 2456777777777776 3311 1222223555666655
No 376
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.67 E-value=7.7e-17 Score=162.02 Aligned_cols=131 Identities=20% Similarity=0.275 Sum_probs=83.6
Q ss_pred EEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccccceEEEeecccCCCCCchhhcCccccccccccccc
Q 002899 57 VTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNL 136 (869)
Q Consensus 57 ~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 136 (869)
+.|++++++++ .+|..+.. +|++|+|++|.|++..+. ..|..+++|++|+|++|+
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~----------------------~~~~~l~~L~~L~Ls~N~ 65 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSD----------------------GLFGRLPHLVKLELKRNQ 65 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCS----------------------CSGGGCTTCCEEECCSSC
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCc----------------------cccccCCCCCEEECCCCC
Confidence 57888888886 56665543 677777777776654432 135555666666666666
Q ss_pred cCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcCCCC
Q 002899 137 FTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGP 212 (869)
Q Consensus 137 l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 212 (869)
|++..|..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|.+.+.
T Consensus 66 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 66 LTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp CCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred CCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCc
Confidence 6655556666666666666666666655555566666666666666666666666666666666666666666654
No 377
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.66 E-value=1.9e-17 Score=200.07 Aligned_cols=202 Identities=19% Similarity=0.208 Sum_probs=95.2
Q ss_pred EEEEeccCCCccc---------cCCccccCCCCCCEEEeecCcCCCCCchhhccccceEEEeecccCCCCCchhhcCccc
Q 002899 56 VVTIALKAQNLTG---------TLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITT 126 (869)
Q Consensus 56 v~~L~l~~~~l~~---------~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l~L~~L~Ls~N~l~~~~~~~~~~l~~ 126 (869)
+..++|+.+.|.+ ..+..+..++.|+.|+|++|.|..+++..+...+|++|+|++|.|+ .+|..|.+|++
T Consensus 193 l~~l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~ 271 (727)
T 4b8c_D 193 LQHKKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIFNISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSN 271 (727)
T ss_dssp -----------------------------CCCCCCEEECTTSCCSCCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTT
T ss_pred hhcCccCcccccCccccccceecChhhhccCCCCcEEECCCCCCCCCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCC
Confidence 4556666665543 3356677777777777777777755555554446777777777777 55666777777
Q ss_pred cccccccccccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCc-ccEEEcc
Q 002899 127 LKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKK-IQKLHIQ 205 (869)
Q Consensus 127 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~-L~~L~L~ 205 (869)
|++|+|++|+|+ .+|..|..|++|++|+|++|.|+ .+|..|.++++|++|+|++|.|++.+|..+..+.. +..|+|+
T Consensus 272 L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~ 349 (727)
T 4b8c_D 272 LRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLR 349 (727)
T ss_dssp CCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhc
Confidence 777777777777 56667777777777777777776 55666777777777777777777666666654422 2335667
Q ss_pred CCcCCCCchHhhhcCCCCCEEEcCCCCCCCCcccccccccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCC
Q 002899 206 GSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLT 281 (869)
Q Consensus 206 ~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~ 281 (869)
+|.+++.+|. .|..|+++.|... ....+.|.+..+..+.++..+....+++|-+.
T Consensus 350 ~N~l~~~~p~------~l~~l~l~~n~~~---------------~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~ 404 (727)
T 4b8c_D 350 DNRPEIPLPH------ERRFIEINTDGEP---------------QREYDSLQQSTEHLATDLAKRTFTVLSYNTLC 404 (727)
T ss_dssp HCCCCCCCCC------C--------------------------------------------------------CCC
T ss_pred cCcccCcCcc------ccceeEeeccccc---------------ccccCCccccccchhhcccccceeeeeccccc
Confidence 7777665554 2334444433100 01122455555566667777888888888876
No 378
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.65 E-value=2.6e-16 Score=155.87 Aligned_cols=127 Identities=18% Similarity=0.276 Sum_probs=78.0
Q ss_pred cEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcCCCCchHhhhcCCCCCEEEcCCC
Q 002899 152 QKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDL 231 (869)
Q Consensus 152 ~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n 231 (869)
+.+++++|+++ .+|..+. ++|++|+|++|++++..+..|..+++|++|+|++|++++..+..+..+++|+.|+|+
T Consensus 10 ~~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~-- 84 (177)
T 2o6r_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLH-- 84 (177)
T ss_dssp TEEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC--
T ss_pred CEEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECC--
Confidence 44555555555 3333222 455666666666655555555556666666666666655444445555554444443
Q ss_pred CCCCCcccccccccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCCCchhhhcCCCCCEEEeeCCcC
Q 002899 232 KGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKL 304 (869)
Q Consensus 232 ~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 304 (869)
+|+|++..+..|..+++|+.|+|++|+|++..+..+..+++|+.|+|++|++
T Consensus 85 ---------------------~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 136 (177)
T 2o6r_A 85 ---------------------ENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPW 136 (177)
T ss_dssp ---------------------SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred ---------------------CCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCe
Confidence 4555555556677788888888888888876666677888888888888833
No 379
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.65 E-value=1.4e-17 Score=197.42 Aligned_cols=221 Identities=18% Similarity=0.179 Sum_probs=145.7
Q ss_pred ceEEEEeccCCCccccCCcccc-CCCCCCEEEeecC-cCCCC-Cchhhccc-cceEEEeecccCCCCCchhhc----Ccc
Q 002899 54 CHVVTIALKAQNLTGTLPTELS-KLRYLKQLDLSRN-CLTGS-FSPQWASL-QLVELSVMGNRLSGPFPKVLT----NIT 125 (869)
Q Consensus 54 ~~v~~L~l~~~~l~~~~p~~l~-~l~~L~~L~Ls~N-~i~~~-~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~----~l~ 125 (869)
.+++.|+|+++.+++..+..+. .+++|++|+|++| .++.. .+..+..+ +|++|+|++|.+++..+..+. .++
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 4689999999999987777776 6899999999999 55543 33344344 899999999998876655554 567
Q ss_pred ccccccccccccCCCCCcc----ccCCCCccEEEeeccc-c---------------------------------------
Q 002899 126 TLKNLSIEGNLFTGSIPPD----IRKLINLQKLILSSNS-F--------------------------------------- 161 (869)
Q Consensus 126 ~L~~L~Ls~N~l~~~~~~~----~~~l~~L~~L~Ls~N~-i--------------------------------------- 161 (869)
+|++|+|++|. ....... +..+++|++|+|++|. +
T Consensus 185 ~L~~L~l~~~~-~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~ 263 (594)
T 2p1m_B 185 SLVSLNISCLA-SEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSG 263 (594)
T ss_dssp CCCEEECTTCC-SCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHT
T ss_pred cCcEEEecccC-CcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHHHHHHHhc
Confidence 99999999997 2111122 2446888999888771 1
Q ss_pred ----------cc----cCCccccCCCCCCeEeccCCcCCCCC-ccccCCCCcccEEEccCCcCCC-CchHhhhcCCCCCE
Q 002899 162 ----------TG----ELPAELTKLTNLNDLRISDNNFSGKI-PEFIGKWKKIQKLHIQGSSLEG-PIPASISALTSLTD 225 (869)
Q Consensus 162 ----------~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~-~~~~~l~~l~~L~~ 225 (869)
.. .++..+..+++|++|+|++|.+++.. ...+..+++|+.|++++| +.. .++.....+++|+.
T Consensus 264 ~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~ 342 (594)
T 2p1m_B 264 CKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRE 342 (594)
T ss_dssp CTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCE
T ss_pred CCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCE
Confidence 10 01222235689999999999987443 334678999999999998 443 23334446888999
Q ss_pred EEcC---------CCCCCCCcccccc--cccceEEEcccccCccCCCcccC-CCCCcCEEecc
Q 002899 226 LRIS---------DLKGSESAFPKLD--KMNLKTLILTKCLIHGEIPDYIG-DMTKLKNIDLS 276 (869)
Q Consensus 226 L~L~---------~n~~~~~~~~~~~--~~~L~~L~Ls~N~i~~~~p~~~~-~l~~L~~L~Ls 276 (869)
|+|. .+.++......+. ..+|+.|.+..|.+++..+..+. .+++|+.|+|+
T Consensus 343 L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~ 405 (594)
T 2p1m_B 343 LRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLC 405 (594)
T ss_dssp EEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEE
T ss_pred EEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEee
Confidence 9883 3344433222211 23566666655555544443333 35555555555
No 380
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.64 E-value=1.5e-16 Score=174.30 Aligned_cols=243 Identities=15% Similarity=0.103 Sum_probs=145.6
Q ss_pred eEEEEeccCCCccccCCccccC-CCCCCEEEeecCcCC--CCCchhhccccceEEEeecccCCCCCchhhcC--------
Q 002899 55 HVVTIALKAQNLTGTLPTELSK-LRYLKQLDLSRNCLT--GSFSPQWASLQLVELSVMGNRLSGPFPKVLTN-------- 123 (869)
Q Consensus 55 ~v~~L~l~~~~l~~~~p~~l~~-l~~L~~L~Ls~N~i~--~~~~~~~~~l~L~~L~Ls~N~l~~~~~~~~~~-------- 123 (869)
+++.|.++++ +...--..+.. +++|+.|||++|+|. ......+.. +..+.+..|. +.+.+|.+
T Consensus 26 ~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~~~--~~~~~~~~~~---I~~~aF~~~~~~~~~g 99 (329)
T 3sb4_A 26 SITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTYPN--GKFYIYMANF---VPAYAFSNVVNGVTKG 99 (329)
T ss_dssp HCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSSGG--GCCEEECTTE---ECTTTTEEEETTEEEE
T ss_pred ceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccccccc--cccccccccc---cCHHHhcccccccccc
Confidence 4566666543 22111122333 677788888887776 222222222 3444444443 33456777
Q ss_pred ccccccccccccccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcC----CCCCccccCCCCcc
Q 002899 124 ITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNF----SGKIPEFIGKWKKI 199 (869)
Q Consensus 124 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l----~~~~~~~~~~l~~L 199 (869)
+++|+.|+|.+ .++.+.+.+|.++++|++|+|++|.+....+.+|.++.++..+.+..+.. .......|.++..|
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 88888888888 77766667788888888888888888767777787777777666655321 11222233333333
Q ss_pred c--------------------------EEEccCCcCCCCchHhh-hcCCCCCEEEcCCCCCCCCcccccccc-cceEEEc
Q 002899 200 Q--------------------------KLHIQGSSLEGPIPASI-SALTSLTDLRISDLKGSESAFPKLDKM-NLKTLIL 251 (869)
Q Consensus 200 ~--------------------------~L~L~~N~l~~~~~~~l-~~l~~L~~L~L~~n~~~~~~~~~~~~~-~L~~L~L 251 (869)
+ .+.+.++-.. .....+ ..+++|+.|+|++|.++.++...+... +|+.|+|
T Consensus 179 ~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l 257 (329)
T 3sb4_A 179 ETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKL 257 (329)
T ss_dssp EEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEEC
T ss_pred ceeEEecCCCcHHHHHhhcccCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEEC
Confidence 3 2222222111 111111 236777777777777776666655554 6777777
Q ss_pred ccccCccCCCcccCCCCCcC-EEeccCCCCCCCCchhhhcCCCCCEEEeeCCcCCCC
Q 002899 252 TKCLIHGEIPDYIGDMTKLK-NIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGP 307 (869)
Q Consensus 252 s~N~i~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 307 (869)
.+| ++.+.+.+|.++++|+ .|+|.+ +++.+.+.+|.++++|+.|+|++|+++..
T Consensus 258 ~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I 312 (329)
T 3sb4_A 258 PHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTL 312 (329)
T ss_dssp CTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEE
T ss_pred Ccc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCcc
Confidence 776 6666677777777777 777777 66666667777777777777777777733
No 381
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.63 E-value=5.5e-16 Score=152.02 Aligned_cols=133 Identities=24% Similarity=0.254 Sum_probs=85.0
Q ss_pred cceEEEeecccCC-CCCchhhcCccccccccccccccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEec
Q 002899 102 QLVELSVMGNRLS-GPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRI 180 (869)
Q Consensus 102 ~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L 180 (869)
+|+.|+|++|+++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|++|+|
T Consensus 25 ~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 102 (168)
T 2ell_A 25 AVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNL 102 (168)
T ss_dssp SCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEEC
T ss_pred cCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEec
Confidence 3444444445544 34455566666677777777766644 56666777777777777777556666666777777777
Q ss_pred cCCcCCCCCc-cccCCCCcccEEEccCCcCCCCch---HhhhcCCCCCEEEcCCCCCCCC
Q 002899 181 SDNNFSGKIP-EFIGKWKKIQKLHIQGSSLEGPIP---ASISALTSLTDLRISDLKGSES 236 (869)
Q Consensus 181 s~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~---~~l~~l~~L~~L~L~~n~~~~~ 236 (869)
++|++++... ..+..+++|+.|+|++|.+++..+ ..+..+++|+.|++++|.+...
T Consensus 103 s~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~ 162 (168)
T 2ell_A 103 SGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEA 162 (168)
T ss_dssp BSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBC
T ss_pred cCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhc
Confidence 7777765422 566777777777777777775544 4677777777777766655443
No 382
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.63 E-value=5.9e-16 Score=155.63 Aligned_cols=128 Identities=23% Similarity=0.271 Sum_probs=81.6
Q ss_pred EEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccccceEEEeecccCCCCCchhhcCccccccccccccc
Q 002899 57 VTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNL 136 (869)
Q Consensus 57 ~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 136 (869)
+.+++++++++ .+|..+. ++|++|+|++|.|+. +|..|.++++|+.|+|++|+
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~~------------------------ip~~~~~l~~L~~L~Ls~N~ 65 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFTL------------------------VPKELSNYKHLTLIDLSNNR 65 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCCS------------------------CCGGGGGCTTCCEEECCSSC
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCch------------------------hHHHhhcccCCCEEECCCCc
Confidence 46788888887 5665543 467777777766652 33455556666666666666
Q ss_pred cCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcCCC
Q 002899 137 FTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEG 211 (869)
Q Consensus 137 l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 211 (869)
|++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|+...+..|..+++|+.|+|++|.+..
T Consensus 66 i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 66 ISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 665555556666666666666666665555566666666666666666665555556666666666666666653
No 383
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.62 E-value=1.2e-15 Score=149.56 Aligned_cols=133 Identities=18% Similarity=0.221 Sum_probs=75.5
Q ss_pred CCccEEEeeccccc-ccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcCCCCchHhhhcCCCCCEEE
Q 002899 149 INLQKLILSSNSFT-GELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLR 227 (869)
Q Consensus 149 ~~L~~L~Ls~N~i~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~ 227 (869)
++|++|+|++|+++ +.+|..+..+++|++|+|++|++++. ..|..+++|+.|+|++|++++.+|..+.++++|+.|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 44555555555555 44454555555555555555555543 4455556666666666666655555555566555555
Q ss_pred cCCCCCCCCcccccccccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCCCc---hhhhcCCCCCEEEeeCCcC
Q 002899 228 ISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIP---TTFEKLAKTNFMYLTGNKL 304 (869)
Q Consensus 228 L~~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l 304 (869)
|++|.++..+ .+..+..+++|+.|+|++|++++..+ ..+..+++|+.|++++|.+
T Consensus 102 Ls~N~l~~~~----------------------~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~ 159 (168)
T 2ell_A 102 LSGNKLKDIS----------------------TLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDRED 159 (168)
T ss_dssp CBSSSCCSSG----------------------GGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTS
T ss_pred ccCCccCcch----------------------hHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCCh
Confidence 5543333211 11445566667777777777665444 3666677777777777766
Q ss_pred C
Q 002899 305 T 305 (869)
Q Consensus 305 ~ 305 (869)
.
T Consensus 160 ~ 160 (168)
T 2ell_A 160 Q 160 (168)
T ss_dssp C
T ss_pred h
Confidence 5
No 384
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.60 E-value=7.4e-16 Score=147.90 Aligned_cols=126 Identities=25% Similarity=0.252 Sum_probs=100.8
Q ss_pred cceEEEeecccCC-CCCchhhcCccccccccccccccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEec
Q 002899 102 QLVELSVMGNRLS-GPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRI 180 (869)
Q Consensus 102 ~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L 180 (869)
+|+.|++++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|++|+|
T Consensus 18 ~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 95 (149)
T 2je0_A 18 DVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNL 95 (149)
T ss_dssp GCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEEC
T ss_pred cCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEEC
Confidence 5667777777776 56677778888888888888888855 67888888888888888888767777777888888888
Q ss_pred cCCcCCCC-CccccCCCCcccEEEccCCcCCCCch---HhhhcCCCCCEEEcC
Q 002899 181 SDNNFSGK-IPEFIGKWKKIQKLHIQGSSLEGPIP---ASISALTSLTDLRIS 229 (869)
Q Consensus 181 s~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~---~~l~~l~~L~~L~L~ 229 (869)
++|++++. .+..+..+++|+.|++++|.+++..+ ..+..+++|+.|+++
T Consensus 96 s~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 96 SGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp TTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 88888863 34778888888888888888887665 678888888888876
No 385
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.59 E-value=1.8e-15 Score=148.81 Aligned_cols=124 Identities=19% Similarity=0.242 Sum_probs=83.2
Q ss_pred CCeEeccCCcCCCCCccccCCCCcccEEEccCCcCCCCchHhhhcCCCCCEEEcCCCCCCCCcccccccccceEEEcccc
Q 002899 175 LNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKC 254 (869)
Q Consensus 175 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N 254 (869)
.+.|++++|+++. +|..+ .++|+.|+|++|+|++..|..|..+++|+.|+|+ +|
T Consensus 11 ~~~l~~s~n~l~~-ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls-----------------------~N 64 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLD-----------------------NN 64 (170)
T ss_dssp TTEEECTTSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECC-----------------------SS
T ss_pred CCEEEeCCCCcCc-cCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECC-----------------------CC
Confidence 3455566666553 33333 2455666666666665555555555555554444 44
Q ss_pred cCccCCCcccCCCCCcCEEeccCCCCCCCCchhhhcCCCCCEEEeeCCcCCCCCchhhhccCCceeeeccCccCCCCCCC
Q 002899 255 LIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFNSNKNVDISLNNFTWESSDPI 334 (869)
Q Consensus 255 ~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~l~ls~N~~~~~~~~p~ 334 (869)
+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++| ||
T Consensus 65 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N------------------------------~~ 114 (170)
T 3g39_A 65 QLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNN------------------------------PW 114 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS------------------------------CB
T ss_pred CcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEeCCC------------------------------CC
Confidence 455455666777888888888888888777777888888888888888 77
Q ss_pred CCCCC-CccceeccCCCCCCC
Q 002899 335 ECPRG-SVNLVESYSSPRNKL 354 (869)
Q Consensus 335 ~C~c~-~~~~~~~l~~~~~~~ 354 (869)
.|+|. +.++..|+.......
T Consensus 115 ~c~c~~l~~l~~~l~~~~~~~ 135 (170)
T 3g39_A 115 DCACSDILYLSRWISQHPGLV 135 (170)
T ss_dssp CTTBGGGHHHHHHHHHCGGGE
T ss_pred CCCchhHHHHHHHHHhCccee
Confidence 89995 889999987655444
No 386
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.59 E-value=5.3e-15 Score=146.38 Aligned_cols=132 Identities=22% Similarity=0.286 Sum_probs=75.8
Q ss_pred EEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccccceEEEeecccCCCCCchhhcCcccccccccccc
Q 002899 56 VVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGN 135 (869)
Q Consensus 56 v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 135 (869)
.+.+++++++++ .+|..+. ++|+.|+|++|++++.++ ..|..+++|++|+|++|
T Consensus 9 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~-----------------------~~~~~l~~L~~L~l~~n 62 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPH-----------------------GVFDKLTQLTKLSLSQN 62 (177)
T ss_dssp TTEEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCT-----------------------TTTTTCTTCSEEECCSS
T ss_pred CCEEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCH-----------------------HHhcCcccccEEECCCC
Confidence 456778888777 4454332 566777777666664444 34455555555555555
Q ss_pred ccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcCCCCc
Q 002899 136 LFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPI 213 (869)
Q Consensus 136 ~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 213 (869)
+|++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|.+.+..
T Consensus 63 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 63 QIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred cceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 555444444555555555555555555444444555566666666666665544444555666666666666665443
No 387
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.58 E-value=2.8e-15 Score=143.83 Aligned_cols=128 Identities=18% Similarity=0.245 Sum_probs=76.2
Q ss_pred CCccEEEeeccccc-ccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcCCCCchHhhhcCCCCCEEE
Q 002899 149 INLQKLILSSNSFT-GELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLR 227 (869)
Q Consensus 149 ~~L~~L~Ls~N~i~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~ 227 (869)
++|++|++++|.++ +.+|..+..+++|++|+|++|++++. ..+..+++|+.|+|++|.+++.+|..+..+++|+.|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 45555666666555 45555555666666666666666544 5556666666666666666655666666666666665
Q ss_pred cCCCCCCCCcccccccccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCCCc---hhhhcCCCCCEEEee
Q 002899 228 ISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIP---TTFEKLAKTNFMYLT 300 (869)
Q Consensus 228 L~~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls 300 (869)
+++|.++..+ .+..+..+++|+.|+|++|++++..+ ..+..+++|+.|+++
T Consensus 95 ls~N~i~~~~----------------------~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLS----------------------TIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHH----------------------HHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChH----------------------HHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 5544333211 22445566677777777777765555 466777777777665
No 388
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.58 E-value=8.1e-16 Score=168.79 Aligned_cols=136 Identities=11% Similarity=0.131 Sum_probs=99.9
Q ss_pred CCCCCCeeeccCceEEEEEEEcCCcEEEEEEecccCch--------------hhHH--------HHHHHHHHHhcCCCce
Q 002899 639 NFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQ--------------GNRE--------FVNEIGMISAQQHPNL 696 (869)
Q Consensus 639 ~f~~~~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~~~--------------~~~~--------f~~E~~~l~~l~H~nI 696 (869)
-|.+.+.||+|+||.||+|...+|+.||||+++..... .... ...|...|.++.+..+
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 38889999999999999999989999999987542110 0011 1245566666654443
Q ss_pred e--eEEeEEeeCceEEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEE
Q 002899 697 V--KLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVL 774 (869)
Q Consensus 697 v--~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NIL 774 (869)
. ..+++ ...+|||||+++++|.++... +....++.|++.+|.|||+.+ ||||||||.|||
T Consensus 176 ~vp~p~~~----~~~~LVME~i~G~~L~~l~~~-----------~~~~~l~~qll~~l~~lH~~g---IVHrDLKp~NIL 237 (397)
T 4gyi_A 176 PVPEPIAQ----SRHTIVMSLVDALPMRQVSSV-----------PDPASLYADLIALILRLAKHG---LIHGDFNEFNIL 237 (397)
T ss_dssp SCCCEEEE----ETTEEEEECCSCEEGGGCCCC-----------SCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEE
T ss_pred CCCeeeec----cCceEEEEecCCccHhhhccc-----------HHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEE
Confidence 2 22222 234799999999888665421 134578899999999999998 999999999999
Q ss_pred EcCCC----------cEEEeecCCceee
Q 002899 775 LDKDL----------NAKISDFGLAKLY 792 (869)
Q Consensus 775 l~~~~----------~~kl~DFGla~~~ 792 (869)
+++++ .+.|+||+-+...
T Consensus 238 l~~dgd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 238 IREEKDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp EEEEECSSCTTSEEEEEEECCCTTCEET
T ss_pred EeCCCCcccccccccceEEEEeCCcccC
Confidence 98876 3899999977553
No 389
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.58 E-value=1.5e-14 Score=162.15 Aligned_cols=248 Identities=10% Similarity=0.072 Sum_probs=173.7
Q ss_pred ccccCCccccCCCCCCEEEeecCcCCCCCchhhccccceEEEeecccCCCCCchhhcCccccccccccccccCCCCCccc
Q 002899 66 LTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDI 145 (869)
Q Consensus 66 l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 145 (869)
++.+-..+|.+. +|+.++|..| ++.+...+|...+|+.+.|.. .++.+.+.+|.++++|+.++|++|+++......|
T Consensus 124 i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF 200 (401)
T 4fdw_A 124 VKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNSTVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTF 200 (401)
T ss_dssp CCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTCCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTT
T ss_pred cCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCCCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhE
Confidence 333334566664 6888888766 777777888888888888875 6776777888888888888888888885555555
Q ss_pred cCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcCCCCchHhhhcCCCCCE
Q 002899 146 RKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTD 225 (869)
Q Consensus 146 ~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~ 225 (869)
. ..+|+.+.|.++ ++.....+|.++++|+.|+|..| ++.+...+|.+ .+|+.+.| .|.++.....+|.++++|+.
T Consensus 201 ~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~ 275 (401)
T 4fdw_A 201 V-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAE 275 (401)
T ss_dssp T-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCE
T ss_pred e-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCE
Confidence 5 578888888754 66566778888888888888875 56566677777 78888888 45566566788888888888
Q ss_pred EEcCCCCCC-----CCccccccc-ccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCCCchhhhcCCCCCEEEe
Q 002899 226 LRISDLKGS-----ESAFPKLDK-MNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYL 299 (869)
Q Consensus 226 L~L~~n~~~-----~~~~~~~~~-~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 299 (869)
+.+.+|.+. .+....+.. .+|+.++|. +.++.+...+|.+|++|+.|+|..| ++.+...+|.++ +|+.|++
T Consensus 276 l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l 352 (401)
T 4fdw_A 276 VTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKV 352 (401)
T ss_dssp EEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEE
T ss_pred EEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEE
Confidence 888877665 233333333 267788877 4477677777888888888888544 665667777777 7888888
Q ss_pred eCCcCCCCCchhhh---ccCCceeeecc
Q 002899 300 TGNKLTGPVPKYIF---NSNKNVDISLN 324 (869)
Q Consensus 300 s~N~l~~~~p~~~~---~~l~~l~ls~N 324 (869)
++|.+....+..+. ..+..|.+..|
T Consensus 353 ~~n~~~~l~~~~F~~~~~~l~~l~vp~~ 380 (401)
T 4fdw_A 353 EGTTPPQVFEKVWYGFPDDITVIRVPAE 380 (401)
T ss_dssp CCSSCCBCCCSSCCCSCTTCCEEEECGG
T ss_pred cCCCCcccccccccCCCCCccEEEeCHH
Confidence 88776633333221 13344555444
No 390
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.57 E-value=2.1e-15 Score=165.00 Aligned_cols=257 Identities=14% Similarity=0.078 Sum_probs=182.1
Q ss_pred ccccCCccccCCCCCCEEEeecCcCCCCCchhhcc-c-cceEEEeecccCC--CCCchhhcCccccccccccccccCCCC
Q 002899 66 LTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWAS-L-QLVELSVMGNRLS--GPFPKVLTNITTLKNLSIEGNLFTGSI 141 (869)
Q Consensus 66 l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~-l-~L~~L~Ls~N~l~--~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 141 (869)
+.+.+++. .+++|+.|.++++ +.......+.. + +|+.|||++|++. ..... .++.++.+.+..|.|.
T Consensus 15 l~~~l~~~--~~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~---~~~~~~~~~~~~~~I~--- 85 (329)
T 3sb4_A 15 LISMMTEE--EANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAG---TYPNGKFYIYMANFVP--- 85 (329)
T ss_dssp GGGGSCHH--HHHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSS---SSGGGCCEEECTTEEC---
T ss_pred HHhhccch--hhCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccc---cccccccccccccccC---
Confidence 34444432 3668999999975 22222223333 3 7999999999998 22222 2333566666666544
Q ss_pred CccccC--------CCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCc----C
Q 002899 142 PPDIRK--------LINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSS----L 209 (869)
Q Consensus 142 ~~~~~~--------l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~----l 209 (869)
+..|.+ +++|++|+|.+ +++.+.+.+|.++++|+.|+|++|.+..+.+.+|.++.++..|.+..+. .
T Consensus 86 ~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~ 164 (329)
T 3sb4_A 86 AYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFK 164 (329)
T ss_dssp TTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTS
T ss_pred HHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcc
Confidence 556777 99999999999 8887778889999999999999999988888899998888888776632 2
Q ss_pred CCCchHhhhcCCCCC-EEEcCCCC------------------------CCCCccccc--ccccceEEEcccccCccCCCc
Q 002899 210 EGPIPASISALTSLT-DLRISDLK------------------------GSESAFPKL--DKMNLKTLILTKCLIHGEIPD 262 (869)
Q Consensus 210 ~~~~~~~l~~l~~L~-~L~L~~n~------------------------~~~~~~~~~--~~~~L~~L~Ls~N~i~~~~p~ 262 (869)
.......|.++.+|+ .+.+.... +....+..+ ...+|+.|+|++|+++.+.+.
T Consensus 165 ~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~ 244 (329)
T 3sb4_A 165 NRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDF 244 (329)
T ss_dssp TTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTT
T ss_pred ccccccccccccccceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHh
Confidence 223334455555555 33332111 111111111 134899999999999988889
Q ss_pred ccCCCCCcCEEeccCCCCCCCCchhhhcCCCCC-EEEeeCCcCCCCCchhh--hccCCceeeeccCccCCCCCCC
Q 002899 263 YIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTN-FMYLTGNKLTGPVPKYI--FNSNKNVDISLNNFTWESSDPI 334 (869)
Q Consensus 263 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~--~~~l~~l~ls~N~~~~~~~~p~ 334 (869)
.|.++++|+.|+|.+| ++.+.+.+|.++++|+ .|+|.+ +++...+..+ ...|+.++++.|+++..+...+
T Consensus 245 aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF 317 (329)
T 3sb4_A 245 TFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELF 317 (329)
T ss_dssp TTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTT
T ss_pred hhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhh
Confidence 9999999999999998 8878889999999999 999998 6774444444 3468899999999998877665
No 391
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.54 E-value=3.5e-14 Score=159.20 Aligned_cols=241 Identities=7% Similarity=0.068 Sum_probs=200.4
Q ss_pred ceEEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhhcCccccccccc
Q 002899 54 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSI 132 (869)
Q Consensus 54 ~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 132 (869)
++++.+.|..+ ++.+-..+|.+ .+|+.+.|.. .++.+....|..+ +|+.++|.+|+++.+...+|. ..+|+.+.|
T Consensus 135 ~~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~l 210 (401)
T 4fdw_A 135 SQIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLL 210 (401)
T ss_dssp CCCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEEC
T ss_pred CCccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEe
Confidence 45778888655 77666677888 4799999985 7888888899887 899999999999988778887 589999999
Q ss_pred cccccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcCC--
Q 002899 133 EGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLE-- 210 (869)
Q Consensus 133 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-- 210 (869)
..+ ++.+...+|.++++|+.|+|..| ++.....+|.+ .+|+.+.| .|.++.+...+|.++++|+.+.+.+|.+.
T Consensus 211 p~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~ 286 (401)
T 4fdw_A 211 PVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDD 286 (401)
T ss_dssp CTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCC
T ss_pred CCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCC
Confidence 855 77677778999999999999975 66566777877 78999999 56677677889999999999999998875
Q ss_pred ---CCchHhhhcCCCCCEEEcCCCCCCCCccccccc-ccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCCCch
Q 002899 211 ---GPIPASISALTSLTDLRISDLKGSESAFPKLDK-MNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPT 286 (869)
Q Consensus 211 ---~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~-~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 286 (869)
...+.+|.++++|+.+.|. +.++.+....+.. .+|+.|.|..| ++.+...+|.++ +|+.|++++|.+....+.
T Consensus 287 ~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~ 363 (401)
T 4fdw_A 287 PEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEK 363 (401)
T ss_dssp TTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCS
T ss_pred cccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccc
Confidence 4567889999999999998 4577777666665 58999999655 887888999999 999999999999988888
Q ss_pred hhhcCC-CCCEEEeeCCcCC
Q 002899 287 TFEKLA-KTNFMYLTGNKLT 305 (869)
Q Consensus 287 ~~~~l~-~L~~L~Ls~N~l~ 305 (869)
.|.+++ +++.|++..|.+.
T Consensus 364 ~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 364 VWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp SCCCSCTTCCEEEECGGGHH
T ss_pred cccCCCCCccEEEeCHHHHH
Confidence 898885 7899999888654
No 392
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.52 E-value=2.5e-16 Score=159.09 Aligned_cols=155 Identities=21% Similarity=0.274 Sum_probs=107.1
Q ss_pred hcCccccccccccccccCCCCCc------cccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccC
Q 002899 121 LTNITTLKNLSIEGNLFTGSIPP------DIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIG 194 (869)
Q Consensus 121 ~~~l~~L~~L~Ls~N~l~~~~~~------~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 194 (869)
+.....++.++|+.+.+++..|. .+..+++|++|+|++|+|++ +| .+.++++|++|+|++|+++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 45566777778888877777666 67777778888888777774 55 6777777888888888777 4566666
Q ss_pred CCCcccEEEccCCcCCCCchHhhhcCCCCCEEEcCCCCCCCCcccccccccceEEEcccccCccCCC-cccCCCCCcCEE
Q 002899 195 KWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIP-DYIGDMTKLKNI 273 (869)
Q Consensus 195 ~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~i~~~~p-~~~~~l~~L~~L 273 (869)
.+++|+.|+|++|++++ +| .+..+++|+.|+|+ +|+|++..+ ..+..+++|+.|
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~-----------------------~N~i~~~~~~~~l~~l~~L~~L 145 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMS-----------------------NNKITNWGEIDKLAALDKLEDL 145 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEES-----------------------EEECCCHHHHHHHTTTTTCSEE
T ss_pred cCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECC-----------------------CCcCCchhHHHHHhcCCCCCEE
Confidence 67777777777777775 33 46666655555544 555543222 356677888888
Q ss_pred eccCCCCCCCCch----------hhhcCCCCCEEEeeCCcCC
Q 002899 274 DLSFNNLTGGIPT----------TFEKLAKTNFMYLTGNKLT 305 (869)
Q Consensus 274 ~Ls~N~l~~~~p~----------~~~~l~~L~~L~Ls~N~l~ 305 (869)
+|++|++++.+|. .+..+++|+.|| +|.++
T Consensus 146 ~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 146 LLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp EECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred EecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 8888887765544 377788888776 67665
No 393
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.52 E-value=2.7e-14 Score=157.39 Aligned_cols=151 Identities=21% Similarity=0.279 Sum_probs=86.0
Q ss_pred eEeccCC-cCCCCCccccCCCCcccEEEccC-CcCCCCchHhhhcCCCCCEEEcCCCCCCCCcccccccccceEEEcccc
Q 002899 177 DLRISDN-NFSGKIPEFIGKWKKIQKLHIQG-SSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKC 254 (869)
Q Consensus 177 ~L~Ls~N-~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N 254 (869)
.++++++ +|+. +|. |..+++|+.|+|++ |.|++..+..|.++++|+.|+|+ +|
T Consensus 12 ~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~-----------------------~N 66 (347)
T 2ifg_A 12 GLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIV-----------------------KS 66 (347)
T ss_dssp CEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECC-----------------------SS
T ss_pred EEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECC-----------------------CC
Confidence 3455554 5552 344 55555555555553 55554444444444444433333 44
Q ss_pred cCccCCCcccCCCCCcCEEeccCCCCCCCCchhhhcCCCCCEEEeeCCcCCCCCchhhhccCCceeeeccCccCCCCCCC
Q 002899 255 LIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFNSNKNVDISLNNFTWESSDPI 334 (869)
Q Consensus 255 ~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~l~ls~N~~~~~~~~p~ 334 (869)
+|++..|..|.++++|+.|+|++|+|++..+..|..++ |+.|+|++| +|
T Consensus 67 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N------------------------------~~ 115 (347)
T 2ifg_A 67 GLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGN------------------------------PL 115 (347)
T ss_dssp CCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSS------------------------------CC
T ss_pred ccceeCHHHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCC------------------------------Cc
Confidence 44445555566666666666666666655555454444 666666665 77
Q ss_pred CCCCCCccceeccCCCCCCCCCCcCccCCCCCCCCCcccccceeeeecCCcceecC
Q 002899 335 ECPRGSVNLVESYSSPRNKLDKVHPCLRQNFPCSAPADQYHYTLHINCGGAKINTG 390 (869)
Q Consensus 335 ~C~c~~~~~~~~l~~~~~~~~~~~~~~~~~~~C~~p~~~~~~~~~~~c~~~~~~~~ 390 (869)
.|+|.+.||..|+......+. .....|..|.....-.. ..|..|.+...
T Consensus 116 ~c~c~l~~~~~~~~~~~~~l~------~~~~~C~~~~~l~~l~~-~~c~~P~i~~~ 164 (347)
T 2ifg_A 116 HCSCALRWLQRWEEEGLGGVP------EQKLQCHGQGPLAHMPN-ASCGVPTLKVQ 164 (347)
T ss_dssp CCCGGGHHHHHHHHTTCSSCG------GGCCCCSSSSCSSCCCC-TTCCCCEEEEE
T ss_pred cCCCccHHHHHHHHhCccccc------ccCCCCCCChHHhcCCc-ccCCCCceecc
Confidence 899999999999876544432 24567877774332222 46877776543
No 394
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.52 E-value=1.7e-14 Score=142.32 Aligned_cols=121 Identities=18% Similarity=0.272 Sum_probs=78.3
Q ss_pred CeEeccCCcCCCCCccccCCCCcccEEEccCCcCCCCchHhhhcCCCCCEEEcCCCCCCCCcccccccccceEEEccccc
Q 002899 176 NDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCL 255 (869)
Q Consensus 176 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~~L~Ls~N~ 255 (869)
+.+++++|+++ .+|..+. ++|+.|+|++|+|++..|..|.++++|+.|+|+ +|+
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls-----------------------~N~ 68 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFN-----------------------SNK 68 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC-----------------------SSC
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECC-----------------------CCC
Confidence 45555555554 3333332 455555555555555555555555555444444 444
Q ss_pred CccCCCcccCCCCCcCEEeccCCCCCCCCchhhhcCCCCCEEEeeCCcCCCCCchhhhccCCceeeeccCccCCCCCCCC
Q 002899 256 IHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFNSNKNVDISLNNFTWESSDPIE 335 (869)
Q Consensus 256 i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~l~ls~N~~~~~~~~p~~ 335 (869)
|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++| ||.
T Consensus 69 l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N------------------------------~~~ 118 (174)
T 2r9u_A 69 LTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNN------------------------------PWD 118 (174)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSS------------------------------CBC
T ss_pred CCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEeCCC------------------------------Ccc
Confidence 44445555677888888888888888766666888888888888888 777
Q ss_pred CCCC-CccceeccCCCCC
Q 002899 336 CPRG-SVNLVESYSSPRN 352 (869)
Q Consensus 336 C~c~-~~~~~~~l~~~~~ 352 (869)
|+|. +.++..|+.....
T Consensus 119 c~~~~~~~l~~~~~~~~~ 136 (174)
T 2r9u_A 119 CECRDIMYLRNWVADHTS 136 (174)
T ss_dssp TTBGGGHHHHHHHHHCGG
T ss_pred cccccHHHHHHHHHhccc
Confidence 9996 7788888865433
No 395
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.51 E-value=7.1e-15 Score=145.35 Aligned_cols=105 Identities=14% Similarity=0.173 Sum_probs=50.2
Q ss_pred ccccccccccccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCcc--ccCCCCcccEEE
Q 002899 126 TLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPE--FIGKWKKIQKLH 203 (869)
Q Consensus 126 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~--~~~~l~~L~~L~ 203 (869)
+|++|+|++|.|++. ..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|+ .+|. .+..+++|+.|+
T Consensus 43 ~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~ 119 (176)
T 1a9n_A 43 QFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLC 119 (176)
T ss_dssp CCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEE
T ss_pred CCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEE
Confidence 444444444444432 34444555555555555555332333345555555555555554 2332 445555555555
Q ss_pred ccCCcCCCCchH---hhhcCCCCCEEEcCCCCC
Q 002899 204 IQGSSLEGPIPA---SISALTSLTDLRISDLKG 233 (869)
Q Consensus 204 L~~N~l~~~~~~---~l~~l~~L~~L~L~~n~~ 233 (869)
|++|.+....+. .+..+++|+.|+++.|.+
T Consensus 120 l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~ 152 (176)
T 1a9n_A 120 ILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKL 152 (176)
T ss_dssp CCSSGGGGSTTHHHHHHHHCTTCSEETTEECCH
T ss_pred ecCCCCCCcHhHHHHHHHHCCccceeCCCcCCH
Confidence 555555422211 355555555555555544
No 396
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.48 E-value=4.6e-16 Score=157.13 Aligned_cols=121 Identities=23% Similarity=0.297 Sum_probs=61.0
Q ss_pred cceEEEeecccCCCCCchhhcCccccccccccccccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEecc
Q 002899 102 QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRIS 181 (869)
Q Consensus 102 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls 181 (869)
+|++|+|++|++++ +| .+..+++|++|+|++|.|+ .+|..+..+++|++|+|++|+|++ +| .+..+++|++|+|+
T Consensus 49 ~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~ 123 (198)
T 1ds9_A 49 ACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMS 123 (198)
T ss_dssp TCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEES
T ss_pred CCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECC
Confidence 34444444444443 23 4455555555555555555 344444444555555555555553 22 34455555555555
Q ss_pred CCcCCCCCc-cccCCCCcccEEEccCCcCCCCchH----------hhhcCCCCCEEE
Q 002899 182 DNNFSGKIP-EFIGKWKKIQKLHIQGSSLEGPIPA----------SISALTSLTDLR 227 (869)
Q Consensus 182 ~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~----------~l~~l~~L~~L~ 227 (869)
+|++++..+ ..+..+++|+.|++++|.+.+..|. .+..+++|+.|+
T Consensus 124 ~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld 180 (198)
T 1ds9_A 124 NNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD 180 (198)
T ss_dssp EEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC
T ss_pred CCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC
Confidence 555553222 3455555555555555555443332 366666666665
No 397
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.47 E-value=4.6e-14 Score=139.44 Aligned_cols=134 Identities=23% Similarity=0.207 Sum_probs=105.4
Q ss_pred ccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhhcCccccccccccccccCCCCCccccCCCC
Q 002899 72 TELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLIN 150 (869)
Q Consensus 72 ~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 150 (869)
..+.++++|+.|+|++|.|+.+ +...... +|+.|+|++|++++. ..|..+++|++|+|++|+|++..+..|..+++
T Consensus 13 ~~~~~~~~L~~L~l~~n~l~~i-~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRGYKIPVI-ENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp CEEECTTSCEEEECTTSCCCSC-CCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred HhcCCcCCceEEEeeCCCCchh-HHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 3467788888899998888865 4444445 788889988888865 56888888888999888888655555688888
Q ss_pred ccEEEeecccccccCCc--cccCCCCCCeEeccCCcCCCCCcc----ccCCCCcccEEEccCCcCC
Q 002899 151 LQKLILSSNSFTGELPA--ELTKLTNLNDLRISDNNFSGKIPE----FIGKWKKIQKLHIQGSSLE 210 (869)
Q Consensus 151 L~~L~Ls~N~i~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~~~----~~~~l~~L~~L~L~~N~l~ 210 (869)
|++|+|++|+|+ .+|. .+..+++|+.|+|++|.++. .|. .+..+++|+.|+++.|.+.
T Consensus 90 L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 90 LTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCHH
Confidence 889999888886 4554 77888888889998888874 454 4788888888888888876
No 398
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.42 E-value=1.5e-13 Score=134.93 Aligned_cols=106 Identities=23% Similarity=0.296 Sum_probs=67.9
Q ss_pred EEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccccceEEEeecccCCCCCchhhcCcccccccccccc
Q 002899 56 VVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGN 135 (869)
Q Consensus 56 v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 135 (869)
.+.|++++|+++ .+|..+. ++|++|+|++|.|++ +.|..|.++++|++|+|++|
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~-----------------------~~~~~~~~l~~L~~L~Ls~N 64 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITK-----------------------LEPGVFDRLTQLTRLDLDNN 64 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCC-----------------------CCTTTTTTCTTCSEEECCSS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCc-----------------------cChhhhcCcccCCEEECCCC
Confidence 356788888887 4565553 566666666666654 44555666666666666666
Q ss_pred ccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCC
Q 002899 136 LFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSG 187 (869)
Q Consensus 136 ~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~ 187 (869)
+|++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|.++.
T Consensus 65 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 65 QLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred CcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 6665555556666666666666666665555556666777777777776663
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.42 E-value=3e-13 Score=133.37 Aligned_cols=104 Identities=20% Similarity=0.284 Sum_probs=66.8
Q ss_pred EEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccccceEEEeecccCCCCCchhhcCccccccccccccc
Q 002899 57 VTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNL 136 (869)
Q Consensus 57 ~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 136 (869)
+.+++++++++ .+|..+. ++|++|+|++|+|++. .|..|.++++|++|+|++|+
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~-----------------------~~~~~~~l~~L~~L~Ls~N~ 68 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKL-----------------------EPGVFDHLVNLQQLYFNSNK 68 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCC-----------------------CTTTTTTCTTCCEEECCSSC
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCcccc-----------------------CHHHhcCCcCCCEEECCCCC
Confidence 56788888876 5666554 6666666666666544 44555666666666666666
Q ss_pred cCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCC
Q 002899 137 FTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFS 186 (869)
Q Consensus 137 l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~ 186 (869)
|++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|.+.
T Consensus 69 l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 69 LTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred CCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEeCCCCcc
Confidence 66544445566666666666666666544445666777777777777766
No 400
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.31 E-value=8.5e-14 Score=154.52 Aligned_cols=157 Identities=18% Similarity=0.182 Sum_probs=79.3
Q ss_pred CCCCEEEeecCcCCCCCchhhccc------cceEEEeecccCCCCCchhh-cCccccccccccccccCCCCCccc-----
Q 002899 78 RYLKQLDLSRNCLTGSFSPQWASL------QLVELSVMGNRLSGPFPKVL-TNITTLKNLSIEGNLFTGSIPPDI----- 145 (869)
Q Consensus 78 ~~L~~L~Ls~N~i~~~~~~~~~~l------~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~~~----- 145 (869)
+.|+.|+|++|.|+......+... +|++|+|++|.++......+ ..+++|+.|+|++|.|+......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 456667777766664433332221 56666666666653322222 234556666666666653322222
Q ss_pred cCCCCccEEEeecccccc----cCCccccCCCCCCeEeccCCcCCCC----CccccCCCCcccEEEccCCcCCCC----c
Q 002899 146 RKLINLQKLILSSNSFTG----ELPAELTKLTNLNDLRISDNNFSGK----IPEFIGKWKKIQKLHIQGSSLEGP----I 213 (869)
Q Consensus 146 ~~l~~L~~L~Ls~N~i~~----~~p~~~~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~----~ 213 (869)
...++|++|+|++|.|+. .++..+..+++|++|+|++|+|+.. ++..+...++|+.|+|++|.|+.. +
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l 231 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALAL 231 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHH
Confidence 234556666666666553 1223334555666666666665532 133444555566666666655532 2
Q ss_pred hHhhhcCCCCCEEEcCCCCCC
Q 002899 214 PASISALTSLTDLRISDLKGS 234 (869)
Q Consensus 214 ~~~l~~l~~L~~L~L~~n~~~ 234 (869)
+..+...++|+.|+|++|.++
T Consensus 232 ~~~L~~~~~L~~L~Ls~N~i~ 252 (372)
T 3un9_A 232 ARAAREHPSLELLHLYFNELS 252 (372)
T ss_dssp HHHHHHCSSCCEEECTTSSCC
T ss_pred HHHHHhCCCCCEEeccCCCCC
Confidence 233344455555555544443
No 401
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.26 E-value=1e-13 Score=153.83 Aligned_cols=168 Identities=16% Similarity=0.173 Sum_probs=130.1
Q ss_pred ceEEEEeccCCCccccCCccccCC-----CCCCEEEeecCcCCCCCchhhcc-c-cceEEEeecccCCCCCchhh-----
Q 002899 54 CHVVTIALKAQNLTGTLPTELSKL-----RYLKQLDLSRNCLTGSFSPQWAS-L-QLVELSVMGNRLSGPFPKVL----- 121 (869)
Q Consensus 54 ~~v~~L~l~~~~l~~~~p~~l~~l-----~~L~~L~Ls~N~i~~~~~~~~~~-l-~L~~L~Ls~N~l~~~~~~~~----- 121 (869)
.+++.|+|++|.|+......|... ++|++|+|++|.|+......+.. + +|+.|+|++|.|+......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 358899999999986544443333 79999999999998654444433 3 89999999999986555554
Q ss_pred cCccccccccccccccCCC----CCccccCCCCccEEEeeccccccc----CCccccCCCCCCeEeccCCcCCCC----C
Q 002899 122 TNITTLKNLSIEGNLFTGS----IPPDIRKLINLQKLILSSNSFTGE----LPAELTKLTNLNDLRISDNNFSGK----I 189 (869)
Q Consensus 122 ~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~i~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~ 189 (869)
...++|++|+|++|.|+.. ++..+..+++|++|+|++|+|+.. ++..+...++|++|+|++|.|+.. +
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l 231 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALAL 231 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHH
Confidence 3468899999999999742 334457789999999999999853 355677788999999999999853 3
Q ss_pred ccccCCCCcccEEEccCCcCCCCchHhhhcCC
Q 002899 190 PEFIGKWKKIQKLHIQGSSLEGPIPASISALT 221 (869)
Q Consensus 190 ~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~ 221 (869)
+..+...++|++|+|++|.|+......+..+.
T Consensus 232 ~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~~ 263 (372)
T 3un9_A 232 ARAAREHPSLELLHLYFNELSSEGRQVLRDLG 263 (372)
T ss_dssp HHHHHHCSSCCEEECTTSSCCHHHHHHHHHCC
T ss_pred HHHHHhCCCCCEEeccCCCCCHHHHHHHHHHh
Confidence 34556679999999999999977666776654
No 402
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.23 E-value=7e-12 Score=137.95 Aligned_cols=103 Identities=21% Similarity=0.191 Sum_probs=64.9
Q ss_pred EEeccCC-CccccCCccccCCCCCCEEEeec-CcCCCCCchhhccccceEEEeecccCCCCCchhhcCcccccccccccc
Q 002899 58 TIALKAQ-NLTGTLPTELSKLRYLKQLDLSR-NCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGN 135 (869)
Q Consensus 58 ~L~l~~~-~l~~~~p~~l~~l~~L~~L~Ls~-N~i~~~~~~~~~~l~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 135 (869)
.++++++ +|+ .+|. |..+++|+.|+|++ |.|+++++. .|.+|++|+.|+|++|
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~-----------------------~~~~l~~L~~L~l~~N 66 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELR-----------------------DLRGLGELRNLTIVKS 66 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGG-----------------------GSCSCCCCSEEECCSS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChh-----------------------HhccccCCCEEECCCC
Confidence 4577787 788 4777 88888888888885 777655444 4555555555555555
Q ss_pred ccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCC
Q 002899 136 LFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFS 186 (869)
Q Consensus 136 ~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~ 186 (869)
+|++..|..|.+|++|++|+|++|+|++..+..|..++ |+.|+|++|.+.
T Consensus 67 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 67 GLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp CCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred ccceeCHHHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 55555555555555566666666665544444444443 666666666665
No 403
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.20 E-value=6.9e-11 Score=124.48 Aligned_cols=148 Identities=14% Similarity=0.073 Sum_probs=114.5
Q ss_pred HHHhcCCCCCCeeeccCceEEEEEEEcCCcEEEEEEecccCchhhHHHHHHHHHHHhcC-CCceeeEEeEEeeCceEEEE
Q 002899 634 KAATNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQ-HPNLVKLYGCCVEGNQLLLV 712 (869)
Q Consensus 634 ~~~t~~f~~~~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lV 712 (869)
...-+.|.+...++.|+.+.||++... ++.+++|+...........+.+|+++++.+. |..+.++++++...+..|+|
T Consensus 10 ~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv 88 (263)
T 3tm0_A 10 KKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLL 88 (263)
T ss_dssp HHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred HHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEE
Confidence 344467878888888888999999754 6789999986532233456889999999884 66777899999988899999
Q ss_pred EEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhc----------------------------------
Q 002899 713 YEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHED---------------------------------- 758 (869)
Q Consensus 713 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~---------------------------------- 758 (869)
|||++|.+|.+.+.. ......++.+++++|+.||+.
T Consensus 89 ~e~i~G~~l~~~~~~----------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (263)
T 3tm0_A 89 MSEADGVLCSEEYED----------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENW 158 (263)
T ss_dssp EECCSSEEHHHHCCT----------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGG
T ss_pred EEecCCeehhhccCC----------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccc
Confidence 999999998765311 112457888999999999981
Q ss_pred ----------------------CCCCeEEcCCCCCCEEEcCCCcEEEeecCCceee
Q 002899 759 ----------------------SRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 792 (869)
Q Consensus 759 ----------------------~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~ 792 (869)
.+..++|+|++|.|||++++..+.|+||+.+...
T Consensus 159 ~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~g 214 (263)
T 3tm0_A 159 EEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGRA 214 (263)
T ss_dssp STTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEEE
T ss_pred cccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcccC
Confidence 1134889999999999987666679999987643
No 404
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.09 E-value=5.9e-10 Score=124.81 Aligned_cols=76 Identities=16% Similarity=0.134 Sum_probs=50.2
Q ss_pred cceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCCCchhhhcCCCCCEEEeeCCcCCCCCchhhh---ccCCceee
Q 002899 245 NLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIF---NSNKNVDI 321 (869)
Q Consensus 245 ~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~---~~l~~l~l 321 (869)
+|+.+.+..+ ++.+...+|.++++|+.++|..+ ++.+...+|.++.+|+.++|..| ++ .++...| .+|+.+++
T Consensus 298 ~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~l 373 (394)
T 4fs7_A 298 SLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LR-KIGANAFQGCINLKKVEL 373 (394)
T ss_dssp TCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTBTTCTTCCEEEE
T ss_pred cccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-cc-EehHHHhhCCCCCCEEEE
Confidence 5777777654 66566677788888888888644 66566677888888888887766 55 3333332 25666776
Q ss_pred ecc
Q 002899 322 SLN 324 (869)
Q Consensus 322 s~N 324 (869)
..+
T Consensus 374 p~~ 376 (394)
T 4fs7_A 374 PKR 376 (394)
T ss_dssp EGG
T ss_pred CCC
Confidence 554
No 405
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.05 E-value=2.8e-10 Score=119.28 Aligned_cols=138 Identities=16% Similarity=0.120 Sum_probs=100.9
Q ss_pred CCCCCCeeeccCceEEEEEEEcCCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCc--eeeEEeEEeeCceEEEEEEec
Q 002899 639 NFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPN--LVKLYGCCVEGNQLLLVYEYM 716 (869)
Q Consensus 639 ~f~~~~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~n--Iv~l~~~~~~~~~~~lV~E~~ 716 (869)
++.+..+.+.|..+.||++...+|+.+++|..... ....+..|+++++.+.+.+ +.+++++...++..++||||+
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i 97 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEV 97 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECC
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEec
Confidence 34443333455668999998777888999987643 2356788999998886545 446888888888899999999
Q ss_pred cCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcC-------------------------------------
Q 002899 717 KNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDS------------------------------------- 759 (869)
Q Consensus 717 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------------------------------------- 759 (869)
++.++. . .. .+ ...++.++++.|..||+..
T Consensus 98 ~G~~l~--~-~~-------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (264)
T 1nd4_A 98 PGQDLL--S-SH-------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQG 164 (264)
T ss_dssp SSEETT--T-SC-------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTT
T ss_pred CCcccC--c-Cc-------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccC
Confidence 998884 2 11 11 2356777888888888642
Q ss_pred ------------------CCCeEEcCCCCCCEEEcCCCcEEEeecCCceee
Q 002899 760 ------------------RIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 792 (869)
Q Consensus 760 ------------------~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~ 792 (869)
+..++|+|++|.|||++++..+.|+|||.+...
T Consensus 165 ~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~g 215 (264)
T 1nd4_A 165 LAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVA 215 (264)
T ss_dssp CCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEEE
T ss_pred ccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcccC
Confidence 122899999999999988766779999998654
No 406
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.98 E-value=1.7e-10 Score=127.03 Aligned_cols=153 Identities=22% Similarity=0.254 Sum_probs=88.2
Q ss_pred ccCCCCCCeEeccCCc-CCCCCccccCCCCcccEEEccCCcCCCCchHhhh--cCCCCCEEEcCC--CC-CCCCcc----
Q 002899 169 LTKLTNLNDLRISDNN-FSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASIS--ALTSLTDLRISD--LK-GSESAF---- 238 (869)
Q Consensus 169 ~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~--~l~~L~~L~L~~--n~-~~~~~~---- 238 (869)
+..+|+|+.|+|++|. +. ++. + .+++|+.|+|..|.+.......+. .+++|+.|+|+. |. ......
T Consensus 168 l~~~P~L~~L~L~g~~~l~--l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~ 243 (362)
T 2ra8_A 168 LDAMPLLNNLKIKGTNNLS--IGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFR 243 (362)
T ss_dssp HHTCTTCCEEEEECCBTCB--CCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTG
T ss_pred HhcCCCCcEEEEeCCCCce--ecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHH
Confidence 3444555555555542 11 111 2 245566666665555433333333 456666666542 11 111100
Q ss_pred ---cccccccceEEEcccccCccCCCccc---CCCCCcCEEeccCCCCCCCC----chhhhcCCCCCEEEeeCCcCCCCC
Q 002899 239 ---PKLDKMNLKTLILTKCLIHGEIPDYI---GDMTKLKNIDLSFNNLTGGI----PTTFEKLAKTNFMYLTGNKLTGPV 308 (869)
Q Consensus 239 ---~~~~~~~L~~L~Ls~N~i~~~~p~~~---~~l~~L~~L~Ls~N~l~~~~----p~~~~~l~~L~~L~Ls~N~l~~~~ 308 (869)
.....++|+.|+|.+|.+.+..+..+ ..+++|+.|+|+.|.|++.. +..+..+++|+.|+|++|.|+...
T Consensus 244 ~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~ 323 (362)
T 2ra8_A 244 PLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEM 323 (362)
T ss_dssp GGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHH
T ss_pred HHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHH
Confidence 11112478888888888765443333 25789999999999998643 334466899999999999887555
Q ss_pred chhhhc-cCCceeeeccC
Q 002899 309 PKYIFN-SNKNVDISLNN 325 (869)
Q Consensus 309 p~~~~~-~l~~l~ls~N~ 325 (869)
-..+.. ....++++.|+
T Consensus 324 ~~~l~~alg~~~~~~~~~ 341 (362)
T 2ra8_A 324 KKELQKSLPMKIDVSDSQ 341 (362)
T ss_dssp HHHHHHHCCSEEECCSBC
T ss_pred HHHHHHHcCCEEEecCCc
Confidence 444443 34668888885
No 407
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.94 E-value=1.9e-10 Score=126.58 Aligned_cols=36 Identities=11% Similarity=0.040 Sum_probs=20.9
Q ss_pred ceEEEEeccCCCccc-c-------CCccccCCCCCCEEEeecCc
Q 002899 54 CHVVTIALKAQNLTG-T-------LPTELSKLRYLKQLDLSRNC 89 (869)
Q Consensus 54 ~~v~~L~l~~~~l~~-~-------~p~~l~~l~~L~~L~Ls~N~ 89 (869)
.+|+.|.+......+ . +..++.++++|+.|.|..+.
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~ 150 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDID 150 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCC
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcc
Confidence 456666666554432 1 23345567788888886543
No 408
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=98.93 E-value=9.4e-10 Score=102.26 Aligned_cols=94 Identities=19% Similarity=0.201 Sum_probs=72.6
Q ss_pred EEEcccccCc-cCCCcccCCCCCcCEEeccCCCCCCCCchhhhcCCCCCEEEeeCCcCCCCCchhhhccCCceeeeccCc
Q 002899 248 TLILTKCLIH-GEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFNSNKNVDISLNNF 326 (869)
Q Consensus 248 ~L~Ls~N~i~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~l~ls~N~~ 326 (869)
.++.+++.++ ..+|..+. ++|+.|+|++|+|+.+.+..|..+++|+.|+|++|
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N------------------------ 65 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGAN------------------------ 65 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSS------------------------
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCC------------------------
Confidence 5667777776 24454322 46899999999999877888888999998888888
Q ss_pred cCCCCCCCCCCCCCccceeccCCCCCCCCCCcCccCCCCCCCCCcccccceee
Q 002899 327 TWESSDPIECPRGSVNLVESYSSPRNKLDKVHPCLRQNFPCSAPADQYHYTLH 379 (869)
Q Consensus 327 ~~~~~~p~~C~c~~~~~~~~l~~~~~~~~~~~~~~~~~~~C~~p~~~~~~~~~ 379 (869)
||.|||.+.||..|+........ .....|+.|+.++|+.+.
T Consensus 66 ------P~~CdC~l~~l~~wl~~~~~~~~------~~~~~C~~P~~l~g~~l~ 106 (130)
T 3rfe_A 66 ------PWRCDCRLVPLRAWLAGRPERAP------YRDLRCVAPPALRGRLLP 106 (130)
T ss_dssp ------CCBCSGGGHHHHHHHHTSSCSGG------GTTCBCCBSTTTTTCBGG
T ss_pred ------CeeccCccHHHHHHHHhCccccc------ccCcEeCcChHHcCCCcc
Confidence 99999999999999986543321 246789999999887654
No 409
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.90 E-value=2e-09 Score=115.93 Aligned_cols=186 Identities=18% Similarity=0.200 Sum_probs=122.5
Q ss_pred CCeeeccCceEEEEEEEcCCcEEEEEEecccCchhhHHHHHHHHHHHhcC-CCc--eeeEEeEEeeCc---eEEEEEEec
Q 002899 643 ANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQ-HPN--LVKLYGCCVEGN---QLLLVYEYM 716 (869)
Q Consensus 643 ~~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~-H~n--Iv~l~~~~~~~~---~~~lV~E~~ 716 (869)
.+.++.|....||+.. ..+++|+.... .....+.+|+++++.+. +.. +.+++......+ ..|+|||++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4668999999999863 45888886432 33567889999998873 333 334554443333 348899999
Q ss_pred cCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhc--------------------------------------
Q 002899 717 KNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHED-------------------------------------- 758 (869)
Q Consensus 717 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-------------------------------------- 758 (869)
+|.++...... .++..++..++.++++.++.||+.
T Consensus 99 ~G~~l~~~~~~-------~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (304)
T 3sg8_A 99 KGVPLTPLLLN-------NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMK 171 (304)
T ss_dssp CCEECCHHHHH-------TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHH
T ss_pred CCeECCccccc-------cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHH
Confidence 99888653321 356777888888888888888861
Q ss_pred -----------------CCCCeEEcCCCCCCEEEcC--CCcEEEeecCCceeecCCCcccccc-------------cccc
Q 002899 759 -----------------SRIKIVHRDIKTSNVLLDK--DLNAKISDFGLAKLYEEDKTHISTR-------------IAGT 806 (869)
Q Consensus 759 -----------------~~~~iiH~Dlk~~NILl~~--~~~~kl~DFGla~~~~~~~~~~~~~-------------~~gt 806 (869)
.++.++|+|++|.||++++ +..+.|+||+.+........-.... ....
T Consensus 172 ~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~ 251 (304)
T 3sg8_A 172 KVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNH 251 (304)
T ss_dssp HHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHH
Confidence 1234799999999999998 4567899999987653311100000 0000
Q ss_pred ccccc-hhhcccCCCCchhHHHHHHHHHHHHHcCCCCC
Q 002899 807 IGYMA-PEYAMRGYLTSKADVYSFGVVTLEIVSGKSNT 843 (869)
Q Consensus 807 ~~y~a-PE~~~~~~~~~k~DvwSlGvil~elltG~~p~ 843 (869)
.+... |+..... ....+.|+++.++|++.+|+.++
T Consensus 252 Y~~~~~~~~~~r~--~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 252 YKHKDIPTVLEKY--RMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HTCSCHHHHHHHH--HHHHHHHHHHHHHHHHHTTCHHH
T ss_pred cCCCCcHHHHHHH--HHHHHHHHHHHHHHHHHcCCHHH
Confidence 11122 2322211 22368999999999999999776
No 410
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.87 E-value=1.8e-08 Score=112.65 Aligned_cols=247 Identities=12% Similarity=0.136 Sum_probs=124.6
Q ss_pred CccccCCC-CCCEEEeecCcCCCCCchhhccc-cceEEEeeccc---CCCCCchhhcCccccccccccccccCCCCCccc
Q 002899 71 PTELSKLR-YLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNR---LSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDI 145 (869)
Q Consensus 71 p~~l~~l~-~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~---l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 145 (869)
..+|.+.+ .|+.+.|-. .++.+...+|... +|+.+.+..|. ++.+...+|.++.+|+.+.+..+ ++......|
T Consensus 56 ~~aF~~~~~~L~sI~iP~-svt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF 133 (394)
T 4gt6_A 56 DRVFCNYKYVLTSVQIPD-TVTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAF 133 (394)
T ss_dssp TTTTTTCCSCCCEEEECT-TCCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTT
T ss_pred HhhccCCCCcCEEEEECC-CeeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhh
Confidence 34555543 356666643 2555555556554 56666665543 44444555555556665555443 232334445
Q ss_pred cCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCCC----------------------CCccccCCCCcccEEE
Q 002899 146 RKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSG----------------------KIPEFIGKWKKIQKLH 203 (869)
Q Consensus 146 ~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~----------------------~~~~~~~~l~~L~~L~ 203 (869)
..+.+|+.+.+..+ +.......|..+.+|+.+.+..+ ++. ....+|..+.+|....
T Consensus 134 ~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~~~l~~i~ip~~~~~i~~~af~~c~~l~~~~ 211 (394)
T 4gt6_A 134 HHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTGTALTQIHIPAKVTRIGTNAFSECFALSTIT 211 (394)
T ss_dssp TTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCCCSEEEECTTCCEECTTTTTTCTTCCEEE
T ss_pred hhhcccccccccce-eeeecccceecccccccccccce-eeEeccccccccceeEEEECCcccccccchhhhccccceec
Confidence 55555555555432 22233334444444554444332 111 2222333333333333
Q ss_pred ccCCc------------------------------------CCCCchHhhhcCCCCCEEEcCCCCCCCCcccccccccce
Q 002899 204 IQGSS------------------------------------LEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLK 247 (869)
Q Consensus 204 L~~N~------------------------------------l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~~~L~ 247 (869)
...+. ++.....+|.++.+|+.+.+.++.............+|+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~v~~i~~~aF~~c~~L~~i~lp~~~~~I~~~aF~~c~~L~ 291 (394)
T 4gt6_A 212 SDSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIPNGVARIETHAFDSCAYLASVKMPDSVVSIGTGAFMNCPALQ 291 (394)
T ss_dssp ECCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECCTTEEEECTTTTTTCSSCCEEECCTTCCEECTTTTTTCTTCC
T ss_pred ccccccccccceeecccccccccccccccccccceEEcCCcceEcccceeeecccccEEecccccceecCcccccccccc
Confidence 22111 111123355666667766665443322222222223577
Q ss_pred EEEcccccCccCCCcccCCCCCcCEEeccCCCCCCCCchhhhcCCCCCEEEeeCCcCCCCCchhhh---ccCCceeeecc
Q 002899 248 TLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIF---NSNKNVDISLN 324 (869)
Q Consensus 248 ~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~---~~l~~l~ls~N 324 (869)
.+.+. +.++.+...+|.++.+|+.++|..+ ++.+...+|.++.+|+.+.|..+ ++ .+....| .+|+.+++.+|
T Consensus 292 ~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~-~I~~~aF~~C~~L~~i~~~~~ 367 (394)
T 4gt6_A 292 DIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VT-KIPESAFSNCTALNNIEYSGS 367 (394)
T ss_dssp EEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CC-BCCGGGGTTCTTCCEEEESSC
T ss_pred cccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cC-EEhHhHhhCCCCCCEEEECCc
Confidence 77765 4455566667777777777777654 55556667777777777777544 54 3333332 35666777665
Q ss_pred C
Q 002899 325 N 325 (869)
Q Consensus 325 ~ 325 (869)
.
T Consensus 368 ~ 368 (394)
T 4gt6_A 368 R 368 (394)
T ss_dssp H
T ss_pred e
Confidence 3
No 411
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.87 E-value=4.7e-09 Score=115.83 Aligned_cols=142 Identities=15% Similarity=0.241 Sum_probs=105.9
Q ss_pred CCeeeccCceEEEEEEEcCCcEEEEEEec--ccC-chhhHHHHHHHHHHHhcCC--CceeeEEeEEeeC---ceEEEEEE
Q 002899 643 ANKVGEGGFGSVYKGILSDGTVIAVKQLS--SKS-RQGNREFVNEIGMISAQQH--PNLVKLYGCCVEG---NQLLLVYE 714 (869)
Q Consensus 643 ~~~IG~G~fG~Vyka~~~~g~~VAvK~~~--~~~-~~~~~~f~~E~~~l~~l~H--~nIv~l~~~~~~~---~~~~lV~E 714 (869)
.+.|+.|.++.||+....+ ..+++|+.. ... ......+.+|+++++.+.+ ..+.++++++.+. +..++|||
T Consensus 43 ~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred EEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 4678999999999988754 578888775 322 1224577889999998874 4577889888776 45899999
Q ss_pred eccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcC-----------------------------------
Q 002899 715 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDS----------------------------------- 759 (869)
Q Consensus 715 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~----------------------------------- 759 (869)
|+++..+.+... ..++...+..++.++++.|+.||+..
T Consensus 122 ~v~G~~l~~~~~-------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (359)
T 3dxp_A 122 FVSGRVLWDQSL-------PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESI 194 (359)
T ss_dssp CCCCBCCCCTTC-------TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCC
T ss_pred ecCCeecCCCcc-------ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCC
Confidence 999877743211 13678888999999999999999731
Q ss_pred --------------------CCCeEEcCCCCCCEEEcCCCc--EEEeecCCceee
Q 002899 760 --------------------RIKIVHRDIKTSNVLLDKDLN--AKISDFGLAKLY 792 (869)
Q Consensus 760 --------------------~~~iiH~Dlk~~NILl~~~~~--~kl~DFGla~~~ 792 (869)
+..++|||+++.|||++.++. +.|+||+.+..-
T Consensus 195 ~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 195 PAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp HHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred hHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 245899999999999997753 689999998754
No 412
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.84 E-value=1.6e-08 Score=113.05 Aligned_cols=220 Identities=13% Similarity=0.129 Sum_probs=157.4
Q ss_pred CccccCCCCCCEEEeecCcCCCCCchhhccc-cceEEEeecccCCCCCchhhcCccccccccccccccCCCCCccccCCC
Q 002899 71 PTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLI 149 (869)
Q Consensus 71 p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 149 (869)
..+|.++++|+.+.|.++ +..+....|... +|+.+.+..| ++.+...+|.++..|+.+.+..+... +...+....
T Consensus 155 ~~aF~~c~~L~~i~l~~~-~~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~ 230 (394)
T 4fs7_A 155 DEAFATCESLEYVSLPDS-METLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKT 230 (394)
T ss_dssp TTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTC
T ss_pred hhhhcccCCCcEEecCCc-cceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE--eehhhcccC
Confidence 345777777777777644 344556666665 6777777655 55455666777777777777665433 223334446
Q ss_pred CccEEEeecccccccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcCCCCchHhhhcCCCCCEEEcC
Q 002899 150 NLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRIS 229 (869)
Q Consensus 150 ~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~ 229 (869)
+|+.+.+..+ ++......|.++.+|+.+.+..+... .....|..+..|+.+.+..+.+. ...|..+.+|+.+.+.
T Consensus 231 ~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~ 305 (394)
T 4fs7_A 231 GVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLL 305 (394)
T ss_dssp CCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEEC
T ss_pred CCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---cccccccccccccccc
Confidence 7777777653 33344566778888888888877554 66677888888888887766543 4578888999999987
Q ss_pred CCCCCCCccccccc-ccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCCCchhhhcCCCCCEEEeeCC
Q 002899 230 DLKGSESAFPKLDK-MNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGN 302 (869)
Q Consensus 230 ~n~~~~~~~~~~~~-~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 302 (869)
++ ++.+....+.. .+|+.++|..+ ++.+...+|.++++|+.++|..| ++.+...+|.++.+|+.++|..+
T Consensus 306 ~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 306 DS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp TT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred cc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 64 55555555544 47999999754 77778889999999999999877 77778889999999999999765
No 413
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.71 E-value=1.3e-07 Score=105.74 Aligned_cols=242 Identities=11% Similarity=0.138 Sum_probs=162.9
Q ss_pred EEEEeccCCCccccCCccccCCCCCCEEEeecCc---CCCCCchhhccc-cceEEEeecccCCCCCchhhcCcccccccc
Q 002899 56 VVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNC---LTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLS 131 (869)
Q Consensus 56 v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~---i~~~~~~~~~~l-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 131 (869)
++.+.+.. +++.+-..+|.++++|+.+.+..|. ++.+...+|... +|+.+.+..+ ++.+...+|..+.+|+.+.
T Consensus 66 L~sI~iP~-svt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~ 143 (394)
T 4gt6_A 66 LTSVQIPD-TVTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTVT 143 (394)
T ss_dssp CCEEEECT-TCCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEEE
T ss_pred CEEEEECC-CeeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhccccccc
Confidence 67777764 4776667789999999999998764 666666777665 5666555433 4445555666666666666
Q ss_pred ccccccCCCCCccccCCCCccEEEeeccc---------------------ccccCCccccCCCCCCeEeccCCc------
Q 002899 132 IEGNLFTGSIPPDIRKLINLQKLILSSNS---------------------FTGELPAELTKLTNLNDLRISDNN------ 184 (869)
Q Consensus 132 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~---------------------i~~~~p~~~~~l~~L~~L~Ls~N~------ 184 (869)
|..+- .......|..+.+|+.+.+..+- +......+|.++.+|+......+.
T Consensus 144 lp~~~-~~I~~~~F~~c~~L~~i~~~~~~~~I~~~aF~~~~l~~i~ip~~~~~i~~~af~~c~~l~~~~~~~~~~~~~~~ 222 (394)
T 4gt6_A 144 IPEGV-TSVADGMFSYCYSLHTVTLPDSVTAIEERAFTGTALTQIHIPAKVTRIGTNAFSECFALSTITSDSESYPAIDN 222 (394)
T ss_dssp CCTTC-CEECTTTTTTCTTCCEEECCTTCCEECTTTTTTCCCSEEEECTTCCEECTTTTTTCTTCCEEEECCSSSCBSSS
T ss_pred cccee-eeecccceecccccccccccceeeEeccccccccceeEEEECCcccccccchhhhccccceecccccccccccc
Confidence 65432 22333445555555555554321 111223344444555444333221
Q ss_pred ------------------------------CCCCCccccCCCCcccEEEccCCcCCCCchHhhhcCCCCCEEEcCCCCCC
Q 002899 185 ------------------------------FSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGS 234 (869)
Q Consensus 185 ------------------------------l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~~~ 234 (869)
++.+...+|.++.+|+.+.+.++... ....+|.++++|+.+.+. +.++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~ 300 (394)
T 4gt6_A 223 VLYEKSANGDYALIRYPSQREDPAFKIPNGVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRIT 300 (394)
T ss_dssp CEEEECTTSCEEEEECCTTCCCSEEECCTTEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCC
T ss_pred eeecccccccccccccccccccceEEcCCcceEcccceeeecccccEEecccccce-ecCcccccccccccccCC-Cccc
Confidence 11122346788899999999766554 667789999999999996 4555
Q ss_pred CCccccccc-ccceEEEcccccCccCCCcccCCCCCcCEEeccCCCCCCCCchhhhcCCCCCEEEeeCCcC
Q 002899 235 ESAFPKLDK-MNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKL 304 (869)
Q Consensus 235 ~~~~~~~~~-~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 304 (869)
.+....+.. .+|+.++|..+ ++.+...+|.+|.+|+.+.|..+ ++.+...+|.++.+|+.+++.+|..
T Consensus 301 ~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 301 ELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHH
T ss_pred ccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCcee
Confidence 555555554 48999999864 77777889999999999999755 7768888999999999999999854
No 414
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.62 E-value=3.1e-07 Score=101.90 Aligned_cols=267 Identities=13% Similarity=0.113 Sum_probs=172.6
Q ss_pred eEEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccccceEEEeecccCCCCCchhhcCccccccccccc
Q 002899 55 HVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIEG 134 (869)
Q Consensus 55 ~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 134 (869)
+++.+.+. .+++.+-..+|.++++|+.++|.. .++.+...+|...+|+.+.+..+ ++.+...+|... +|+.+.|..
T Consensus 47 ~i~~v~ip-~~vt~Ig~~aF~~C~~L~~I~lp~-~v~~Ig~~aF~~c~l~~i~~~~~-l~~I~~~aF~~~-~L~~i~lp~ 122 (379)
T 4h09_A 47 RISEVRVN-SGITSIGEANFNSCYNMTKVTVAS-TVTSIGDGAFADTKLQSYTGMER-VKKFGDYVFQGT-DLDDFEFPG 122 (379)
T ss_dssp GCSEEEEC-TTEEEECTTTTTTCTTCCEEEECT-TCCEECTTTTTTCCCCEEEECTT-CCEECTTTTTTC-CCSEEECCT
T ss_pred CCEEEEeC-CCccChHHHHhhCCCCCCEEEeCC-cceEechhhhcCCCCceEECCce-eeEeccceeccC-CcccccCCC
Confidence 46677775 467766667899999999999975 48888888998888888888654 555666667654 788888876
Q ss_pred cccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCCcCC----------------------------
Q 002899 135 NLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFS---------------------------- 186 (869)
Q Consensus 135 N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~---------------------------- 186 (869)
+-.. .....|.+. +|+.+.+..+ ++......|..+.+|+.+.+..+...
T Consensus 123 ~~~~-i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (379)
T 4h09_A 123 ATTE-IGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEF 199 (379)
T ss_dssp TCCE-ECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEE
T ss_pred cccc-ccccccccc-eeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceecccccccccccc
Confidence 5322 333344433 4555555443 33233445555555555554433211
Q ss_pred -------CCCccccCCCCcccEEEccCCcCCCCchHhhhcCCCCCEEEcCCCCCCCCccccccc-ccceEEEcccccCcc
Q 002899 187 -------GKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDK-MNLKTLILTKCLIHG 258 (869)
Q Consensus 187 -------~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~-~~L~~L~Ls~N~i~~ 258 (869)
......+....+|+.+.+..+ +.......+.++.+|+.+.+..+ ++.+....+.. .+|+.+.+..+ ++.
T Consensus 200 ~~~~~~~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~ 276 (379)
T 4h09_A 200 TIPSTVKTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKT 276 (379)
T ss_dssp ECCTTCCEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSE
T ss_pred ccccceeEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-cee
Confidence 122334555667777777544 34355667888888888888765 44444333333 36888888643 665
Q ss_pred CCCcccCCCCCcCEEeccCCCCCCCCchhhhcCCCCCEEEeeCCcCCCCCchhhh---ccCCceeeeccCccCCCCCCC
Q 002899 259 EIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIF---NSNKNVDISLNNFTWESSDPI 334 (869)
Q Consensus 259 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~---~~l~~l~ls~N~~~~~~~~p~ 334 (869)
.....|.++++|+.+.+.++.++.+...+|.++.+|+.+.|..+ ++ .+....| .+|+.+.+..+ ++..+...+
T Consensus 277 i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF 352 (379)
T 4h09_A 277 VPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LK-TIQVYAFKNCKALSTISYPKS-ITLIESGAF 352 (379)
T ss_dssp ECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCCCCCCTT-CCEECTTTT
T ss_pred ccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-cc-EEHHHHhhCCCCCCEEEECCc-cCEEchhHh
Confidence 66777888999999999888888777788888999999988755 55 3444333 35777777544 554444444
No 415
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.53 E-value=1.2e-06 Score=94.75 Aligned_cols=185 Identities=14% Similarity=0.144 Sum_probs=121.1
Q ss_pred CCCCCCeeeccCceEEEEEEEcCCcEEEEEEecccCchhhHHHHHHHHHHHhcCC---C-ceeeEEeEEeeCceEEEEEE
Q 002899 639 NFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQH---P-NLVKLYGCCVEGNQLLLVYE 714 (869)
Q Consensus 639 ~f~~~~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H---~-nIv~l~~~~~~~~~~~lV~E 714 (869)
.....+.++.|....||+. ++.+++|+.... .....+..|.+++..+.+ + .+.+++++ +..++|||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme 107 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK 107 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence 4556678999999999997 566888876432 223458889998888866 1 23455554 56789999
Q ss_pred eccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCC----------------------------------
Q 002899 715 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSR---------------------------------- 760 (869)
Q Consensus 715 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~---------------------------------- 760 (869)
|+++.++...... .++..++..++.++++.++.||+...
T Consensus 108 ~i~G~~l~~~~~~-------~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (320)
T 3r70_A 108 YIKGERITYEQYH-------KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQL 180 (320)
T ss_dssp CCCCBCCCHHHHT-------TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred ecCCccccccccc-------cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccc
Confidence 9999888643321 34666777788888888888885432
Q ss_pred --------------------------CCeEEcCCCCCCEEEcCCCcEEEeecCCceeecCCCccccccccccccccchhh
Q 002899 761 --------------------------IKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEEDKTHISTRIAGTIGYMAPEY 814 (869)
Q Consensus 761 --------------------------~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~ 814 (869)
+.++|+|++|.|||++.+..+.|+||+.+........-... .........||.
T Consensus 181 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~ 259 (320)
T 3r70_A 181 LTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGDPDNDFLCL-LDCSTDDFGKEF 259 (320)
T ss_dssp CCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEECGGGGGHHH-HSCCTTSCCHHH
T ss_pred ccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccCCHHHHHHHH-HHhcccccCHHH
Confidence 23589999999999998766799999998765432211111 111111233443
Q ss_pred cc----c-CC-----CCchhHHHHHHHHHHHHHcCCC
Q 002899 815 AM----R-GY-----LTSKADVYSFGVVTLEIVSGKS 841 (869)
Q Consensus 815 ~~----~-~~-----~~~k~DvwSlGvil~elltG~~ 841 (869)
.. . .. ...+.+.|..-..+.+++.|-.
T Consensus 260 ~~~~l~~Y~~~~~~~~~~~~~~~~~~~~l~~l~~~~~ 296 (320)
T 3r70_A 260 GRKVLKYYQHKAPEVAERKAELNDVYWSIDQIIYGYE 296 (320)
T ss_dssp HHHHHHHTTCSCHHHHHHHHHHHHHTHHHHHHHSSCT
T ss_pred HHHHHHHHhccCcHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 22 0 11 1245778866556889998853
No 416
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.41 E-value=4.3e-08 Score=97.17 Aligned_cols=114 Identities=16% Similarity=0.182 Sum_probs=60.3
Q ss_pred hhcCcccccccccccc-ccCCC----CCccccCCCCccEEEeeccccccc----CCccccCCCCCCeEeccCCcCCCC--
Q 002899 120 VLTNITTLKNLSIEGN-LFTGS----IPPDIRKLINLQKLILSSNSFTGE----LPAELTKLTNLNDLRISDNNFSGK-- 188 (869)
Q Consensus 120 ~~~~l~~L~~L~Ls~N-~l~~~----~~~~~~~l~~L~~L~Ls~N~i~~~----~p~~~~~l~~L~~L~Ls~N~l~~~-- 188 (869)
.+...+.|++|+|++| .|... +...+...++|++|+|++|+|... +...+...++|++|+|++|.|+..
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~ 110 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGI 110 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHH
Confidence 3444555555555555 54421 122334445566666666665532 223334445666666666666532
Q ss_pred --CccccCCCCcccEEEc--cCCcCCCC----chHhhhcCCCCCEEEcCCCCC
Q 002899 189 --IPEFIGKWKKIQKLHI--QGSSLEGP----IPASISALTSLTDLRISDLKG 233 (869)
Q Consensus 189 --~~~~~~~l~~L~~L~L--~~N~l~~~----~~~~l~~l~~L~~L~L~~n~~ 233 (869)
+...+...++|++|+| ++|.|... +...+...++|+.|+|++|.+
T Consensus 111 ~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 111 LALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp HHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCC
Confidence 2344555566666666 56666542 234445556666666665554
No 417
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.40 E-value=4.8e-08 Score=102.00 Aligned_cols=104 Identities=23% Similarity=0.268 Sum_probs=72.6
Q ss_pred hcCcccccc--ccccccccCCCCCc----cccCCCCccEEEeecccccc--cCCccccCCCCCCeEeccCCcCCCCCccc
Q 002899 121 LTNITTLKN--LSIEGNLFTGSIPP----DIRKLINLQKLILSSNSFTG--ELPAELTKLTNLNDLRISDNNFSGKIPEF 192 (869)
Q Consensus 121 ~~~l~~L~~--L~Ls~N~l~~~~~~----~~~~l~~L~~L~Ls~N~i~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 192 (869)
|...+.|+. ++++.|+.. .++. ...++++|++|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..
T Consensus 137 l~~dp~L~~~~l~l~~N~~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~ 213 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RE 213 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GG
T ss_pred cCCCcchhhcCccccCCHHH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hh
Confidence 555556665 666777433 2222 22467888888888888886 4456677888899999999988854 33
Q ss_pred cCCCC--cccEEEccCCcCCCCch-------HhhhcCCCCCEEE
Q 002899 193 IGKWK--KIQKLHIQGSSLEGPIP-------ASISALTSLTDLR 227 (869)
Q Consensus 193 ~~~l~--~L~~L~L~~N~l~~~~~-------~~l~~l~~L~~L~ 227 (869)
+..+. +|++|+|++|.+.+..| ..+..+++|+.||
T Consensus 214 l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 214 LDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 34444 88999999999886443 4578888888886
No 418
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.39 E-value=1.8e-06 Score=91.87 Aligned_cols=144 Identities=19% Similarity=0.175 Sum_probs=95.5
Q ss_pred CCCeeeccCceEEEEEEEcCCcEEEEEEecccCchhhHHHHHHHHHHHhcCCC---ceeeEEeEEeeCceEEEEEEeccC
Q 002899 642 PANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHP---NLVKLYGCCVEGNQLLLVYEYMKN 718 (869)
Q Consensus 642 ~~~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~---nIv~l~~~~~~~~~~~lV~E~~~~ 718 (869)
..+.|+.|.++.||++...+|+.++||+...........|..|++.|+.+++. .+.+++++. ..++||||+++
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g 94 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEeccc
Confidence 35679999999999999888999999997544333356789999999999875 467787763 36899999999
Q ss_pred Cchh-----------hhhhcCCcc-ccc---------------CCCHHHHHH--------------------HHHHHHHH
Q 002899 719 NCLS-----------RAIFGKDTE-YRL---------------KLDWPTRKK--------------------ICIGIARG 751 (869)
Q Consensus 719 gsL~-----------~~l~~~~~~-~~~---------------~l~~~~~~~--------------------i~~~ia~g 751 (869)
+.+. ..||..... ... .-+|..... ....+-+.
T Consensus 95 ~~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~~~~l 174 (288)
T 3d1u_A 95 RPPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVEKV 174 (288)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 8752 123432111 000 023433210 01111222
Q ss_pred HHHHH----hcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCcee
Q 002899 752 LAYLH----EDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKL 791 (869)
Q Consensus 752 L~yLH----~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~ 791 (869)
++.|. ...++.++|+|+.+.||+++. +.+.|+|| .+..
T Consensus 175 ~~~l~~~l~~~~~~~l~HgD~~~~N~l~~~-~~~~~iD~-~~~~ 216 (288)
T 3d1u_A 175 LDALDHLAGDPEPPARIHGDLWNGNVLWQD-DGAVVIDP-AAHG 216 (288)
T ss_dssp HHTHHHHTCSCCCCEEECSCCSGGGEEEET-TEEEECSC-CCEE
T ss_pred HHHHHHHhcCCCCCcceECCCCcCcEEEeC-CCeEEEcC-CcCC
Confidence 33332 223466899999999999998 45889999 6654
No 419
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.39 E-value=7.5e-08 Score=95.46 Aligned_cols=121 Identities=14% Similarity=0.132 Sum_probs=76.8
Q ss_pred CccccCCCCCCeEeccCC-cCCCC----CccccCCCCcccEEEccCCcCCCC----chHhhhcCCCCCEEEcCCCCCCCC
Q 002899 166 PAELTKLTNLNDLRISDN-NFSGK----IPEFIGKWKKIQKLHIQGSSLEGP----IPASISALTSLTDLRISDLKGSES 236 (869)
Q Consensus 166 p~~~~~l~~L~~L~Ls~N-~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~----~~~~l~~l~~L~~L~L~~n~~~~~ 236 (869)
...+...++|++|+|++| .|... +...+...++|++|+|++|.|... +...+...++|+.|+|++|.+...
T Consensus 29 ~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~ 108 (185)
T 1io0_A 29 KRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGS 108 (185)
T ss_dssp HHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHH
T ss_pred HHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHH
Confidence 344566778888888888 77632 334455667777777777777642 234445556666666665554432
Q ss_pred cccccccccceEEEcccccCccCCCcccCCCCCcCEEec--cCCCCCCC----CchhhhcCCCCCEEEeeCCcCC
Q 002899 237 AFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDL--SFNNLTGG----IPTTFEKLAKTNFMYLTGNKLT 305 (869)
Q Consensus 237 ~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L--s~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 305 (869)
.... +...+...++|++|+| ++|.|+.. +...+...++|+.|+|++|.+.
T Consensus 109 g~~~-------------------l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 109 GILA-------------------LVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHH-------------------HHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHH-------------------HHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 2111 2344556678888888 77888743 3345556688888888888775
No 420
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.37 E-value=2.9e-06 Score=93.98 Aligned_cols=241 Identities=14% Similarity=0.080 Sum_probs=164.2
Q ss_pred ceEEEEeccCCCccccCCccccCCCCCCEEEeecCcCCCCCchhhccccceEEEeecccCCCCCchhhcCcccccccccc
Q 002899 54 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIE 133 (869)
Q Consensus 54 ~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~i~~~~~~~~~~l~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 133 (869)
..++.++|.. +++.+-..+|.+. +|+.+.+.. .++.+...+|...+|+.+.+..+ +..+...+|.+. +|+.+.+.
T Consensus 69 ~~L~~I~lp~-~v~~Ig~~aF~~c-~l~~i~~~~-~l~~I~~~aF~~~~L~~i~lp~~-~~~i~~~~F~~~-~l~~~~~~ 143 (379)
T 4h09_A 69 YNMTKVTVAS-TVTSIGDGAFADT-KLQSYTGME-RVKKFGDYVFQGTDLDDFEFPGA-TTEIGNYIFYNS-SVKRIVIP 143 (379)
T ss_dssp TTCCEEEECT-TCCEECTTTTTTC-CCCEEEECT-TCCEECTTTTTTCCCSEEECCTT-CCEECTTTTTTC-CCCEEEEC
T ss_pred CCCCEEEeCC-cceEechhhhcCC-CCceEECCc-eeeEeccceeccCCcccccCCCc-cccccccccccc-eeeeeecc
Confidence 3578888864 4775556677776 687877764 46666777777778888888654 332334444443 34444443
Q ss_pred ccccCCCCCccccCCCCccEEEeecccc-----------------------------------cccCCccccCCCCCCeE
Q 002899 134 GNLFTGSIPPDIRKLINLQKLILSSNSF-----------------------------------TGELPAELTKLTNLNDL 178 (869)
Q Consensus 134 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~i-----------------------------------~~~~p~~~~~l~~L~~L 178 (869)
.+ ++......|....+|+.+.+..+.. .......+....+|+.+
T Consensus 144 ~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~l~~i 222 (379)
T 4h09_A 144 KS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTVKTVTAYGFSYGKNLKKI 222 (379)
T ss_dssp TT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTCCEECTTTTTTCSSCSEE
T ss_pred ce-eeccccchhcccccccccccccccceeecccceecccccceeccccccccccccccccceeEEeeccccccccccee
Confidence 32 2223333444455555444433211 11233455667788888
Q ss_pred eccCCcCCCCCccccCCCCcccEEEccCCcCCCCchHhhhcCCCCCEEEcCCCCCCCCccccccc-ccceEEEcccccCc
Q 002899 179 RISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDK-MNLKTLILTKCLIH 257 (869)
Q Consensus 179 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~-~~L~~L~Ls~N~i~ 257 (869)
.+..+ +..+...+|.++..|+.+.+..+ ++.....+|.++.+|+.+.+..+ +.......+.. .+|+.+.+.++.++
T Consensus 223 ~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~ 299 (379)
T 4h09_A 223 TITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIE 299 (379)
T ss_dssp ECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCC
T ss_pred eeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccc
Confidence 88765 44466778889999999999876 66566788999999999998654 44444444443 47999999999999
Q ss_pred cCCCcccCCCCCcCEEeccCCCCCCCCchhhhcCCCCCEEEeeCCcCC
Q 002899 258 GEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLT 305 (869)
Q Consensus 258 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 305 (869)
.+...+|.++.+|+.+.|..+ ++.+...+|.++.+|+.+.+..+ ++
T Consensus 300 ~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~ 345 (379)
T 4h09_A 300 TLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-IT 345 (379)
T ss_dssp EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CC
T ss_pred eehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cC
Confidence 888899999999999999765 77677788999999999998765 54
No 421
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.25 E-value=5.9e-06 Score=86.80 Aligned_cols=137 Identities=13% Similarity=0.101 Sum_probs=95.0
Q ss_pred eeeccCce-EEEEEEEc-CCcEEEEEEecccCchhhHHHHHHHHHHHhcCC-CceeeEEeEEeeCceEEEEEEeccCCch
Q 002899 645 KVGEGGFG-SVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQH-PNLVKLYGCCVEGNQLLLVYEYMKNNCL 721 (869)
Q Consensus 645 ~IG~G~fG-~Vyka~~~-~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H-~nIv~l~~~~~~~~~~~lV~E~~~~gsL 721 (869)
.+..|..| .||+.... ++..+++|+-... ...++.+|.+.|+.+.. --+.++++++.+.+..++|||++++.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 45566665 69987765 4567888976432 34567889998887742 2355788999999999999999999887
Q ss_pred hhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhc-------------------------------------------
Q 002899 722 SRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHED------------------------------------------- 758 (869)
Q Consensus 722 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~------------------------------------------- 758 (869)
.+..... ......++.++++.|.-||..
T Consensus 108 ~~~~~~~---------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (272)
T 4gkh_A 108 FQVLEEY---------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQ 178 (272)
T ss_dssp HHHHHHC---------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHH
T ss_pred cccccCC---------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHH
Confidence 6544221 112234455555555555531
Q ss_pred ------------CCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeec
Q 002899 759 ------------SRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 793 (869)
Q Consensus 759 ------------~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~ 793 (869)
.++.++|+|+.+.|||++.++.+-|+||+.+....
T Consensus 179 ~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~gd 225 (272)
T 4gkh_A 179 VWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGIAD 225 (272)
T ss_dssp HHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEEEE
T ss_pred HHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccccCC
Confidence 12237899999999999988777899999986543
No 422
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.25 E-value=7.6e-06 Score=87.85 Aligned_cols=180 Identities=15% Similarity=0.125 Sum_probs=111.0
Q ss_pred CCeeeccCceEEEEEEEcCCcEEEEEEecccCchhhHHHHHHHHHHHhcCCC---ceeeEEeEEe-eCceEEEEEEeccC
Q 002899 643 ANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHP---NLVKLYGCCV-EGNQLLLVYEYMKN 718 (869)
Q Consensus 643 ~~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~---nIv~l~~~~~-~~~~~~lV~E~~~~ 718 (869)
.+.++.|....||+. ++.+++|+.. .......+..|++++..+.+. .+.+++.+.. ..+..++||||++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 456888888899987 4667888753 223356788999999998753 2456666664 34567899999999
Q ss_pred CchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhc----------------------------------------
Q 002899 719 NCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHED---------------------------------------- 758 (869)
Q Consensus 719 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~---------------------------------------- 758 (869)
..+...... .++...+..++.++++.|+.||+.
T Consensus 98 ~~l~~~~~~-------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~ 170 (306)
T 3tdw_A 98 QILGEDGMA-------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRD 170 (306)
T ss_dssp EECHHHHHT-------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHH
T ss_pred eECchhhhh-------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHH
Confidence 888653211 123344444445555544444432
Q ss_pred -----------------CCCCeEEcCCCCCCEEEcC---CCc-EEEeecCCceeecCCCccccccccccccccchhh---
Q 002899 759 -----------------SRIKIVHRDIKTSNVLLDK---DLN-AKISDFGLAKLYEEDKTHISTRIAGTIGYMAPEY--- 814 (869)
Q Consensus 759 -----------------~~~~iiH~Dlk~~NILl~~---~~~-~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~--- 814 (869)
.++.++|+|+++.||+++. ++. +.|+||+.+..-.+...-... . ....|+.
T Consensus 171 ~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~gd~~~Dla~~--~---~~~~~~~~~~ 245 (306)
T 3tdw_A 171 YLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAISDPDYDYVYL--L---EDCGELFTRQ 245 (306)
T ss_dssp HHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEECGGGGGHHH--H---HHTCHHHHHH
T ss_pred HHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCCCHHHHHHHH--H---HhcCHHHHHH
Confidence 2334799999999999987 455 489999988765432211100 0 0011211
Q ss_pred -cccCC---C---CchhHHHHHHHHHHHHHcCC
Q 002899 815 -AMRGY---L---TSKADVYSFGVVTLEIVSGK 840 (869)
Q Consensus 815 -~~~~~---~---~~k~DvwSlGvil~elltG~ 840 (869)
+.... . ..+.++|++..++..++.|.
T Consensus 246 ~~~Y~~~~~~~~~~~r~~~~~~~~~l~~~~~~~ 278 (306)
T 3tdw_A 246 VMAYRGEVDLDTHIRKVSLFVTFDQVSYLLEGL 278 (306)
T ss_dssp HHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcccccCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 11110 0 34678899888777766554
No 423
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.17 E-value=2.5e-07 Score=96.62 Aligned_cols=30 Identities=23% Similarity=0.164 Sum_probs=17.3
Q ss_pred CcCEEeccCCCCCCCCc-------hhhhcCCCCCEEE
Q 002899 269 KLKNIDLSFNNLTGGIP-------TTFEKLAKTNFMY 298 (869)
Q Consensus 269 ~L~~L~Ls~N~l~~~~p-------~~~~~l~~L~~L~ 298 (869)
+|+.|+|++|.+++..| ..+..+++|+.||
T Consensus 221 ~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 221 KLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp CCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred CcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 56666666666655443 2355666666654
No 424
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.08 E-value=2e-05 Score=86.70 Aligned_cols=145 Identities=13% Similarity=0.126 Sum_probs=91.2
Q ss_pred CCeeeccCceEEEEEEEcCCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCc--eeeEEeEEeeC-ceEEEEEEeccCC
Q 002899 643 ANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPN--LVKLYGCCVEG-NQLLLVYEYMKNN 719 (869)
Q Consensus 643 ~~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~n--Iv~l~~~~~~~-~~~~lV~E~~~~g 719 (869)
.+.++.|....+|+... +++.+++|..... ..+..|+.++..+.... +.++++++... +..++||||+++.
T Consensus 46 i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~ 119 (362)
T 3ovc_A 46 LMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGV 119 (362)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSE
T ss_pred EEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCC
Confidence 46689999999999876 5788899987432 25788889988886544 44677776654 5689999999986
Q ss_pred chhhh------------------hhcCCccc---------------------------ccCCCHHHH------HHHHHHH
Q 002899 720 CLSRA------------------IFGKDTEY---------------------------RLKLDWPTR------KKICIGI 748 (869)
Q Consensus 720 sL~~~------------------l~~~~~~~---------------------------~~~l~~~~~------~~i~~~i 748 (869)
.+.+. ||...... .....|... ......+
T Consensus 120 ~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 199 (362)
T 3ovc_A 120 TLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQAL 199 (362)
T ss_dssp ETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHHHH
T ss_pred CcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchHHH
Confidence 65321 12111000 000011110 1111222
Q ss_pred HHHHHHHHhc-CCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeec
Q 002899 749 ARGLAYLHED-SRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 793 (869)
Q Consensus 749 a~gL~yLH~~-~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~ 793 (869)
...++++... .++.++|+|+.+.|||+++++.+.|+||+.+..-.
T Consensus 200 ~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~gd 245 (362)
T 3ovc_A 200 DELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFGD 245 (362)
T ss_dssp HHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEEC
T ss_pred HHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccCC
Confidence 2223333221 11458999999999999887778899999987654
No 425
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.00 E-value=1.1e-05 Score=88.61 Aligned_cols=79 Identities=6% Similarity=0.011 Sum_probs=54.5
Q ss_pred Cee-eccCceEEEEEEEc-------CCcEEEEEEecccC---chhhHHHHHHHHHHHhcCC---CceeeEEeEEeeC---
Q 002899 644 NKV-GEGGFGSVYKGILS-------DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQH---PNLVKLYGCCVEG--- 706 (869)
Q Consensus 644 ~~I-G~G~fG~Vyka~~~-------~g~~VAvK~~~~~~---~~~~~~f~~E~~~l~~l~H---~nIv~l~~~~~~~--- 706 (869)
+.| +.|....+|+.... +++.+++|+..... ......+..|+++++.+.. -.+.++++++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 557 78888999998764 26678888865432 1112467788888887742 2456788877655
Q ss_pred ceEEEEEEeccCCchh
Q 002899 707 NQLLLVYEYMKNNCLS 722 (869)
Q Consensus 707 ~~~~lV~E~~~~gsL~ 722 (869)
+..++||||+++..+.
T Consensus 106 g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPP 121 (357)
T ss_dssp SSCEEEEECCCCBCCC
T ss_pred CCceEEEEecCCCChh
Confidence 3568999999987654
No 426
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.83 E-value=9.9e-06 Score=78.50 Aligned_cols=84 Identities=13% Similarity=0.163 Sum_probs=56.5
Q ss_pred CCccEEEeecccccccCCccccCCCCCCeEeccCCc-CCCCCccccCCC----CcccEEEccCCc-CCCCchHhhhcCCC
Q 002899 149 INLQKLILSSNSFTGELPAELTKLTNLNDLRISDNN-FSGKIPEFIGKW----KKIQKLHIQGSS-LEGPIPASISALTS 222 (869)
Q Consensus 149 ~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l----~~L~~L~L~~N~-l~~~~~~~l~~l~~ 222 (869)
.+|++|||+++.|+..--..+.++++|++|+|++|. |+..--..++.+ ++|++|+|++|. |+...-..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 467777777777776555566777777777777774 554444445553 367888887764 66555566777777
Q ss_pred CCEEEcCCCC
Q 002899 223 LTDLRISDLK 232 (869)
Q Consensus 223 L~~L~L~~n~ 232 (869)
|+.|+|+++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 7777777654
No 427
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.80 E-value=8.3e-05 Score=80.69 Aligned_cols=144 Identities=16% Similarity=0.243 Sum_probs=80.4
Q ss_pred CeeeccCceEEEEEEEcCCcEEEEEEecccCchhhHHHHHHHHHHHhc-----CCCceeeEE-e--EEeeCceEEEEEEe
Q 002899 644 NKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQ-----QHPNLVKLY-G--CCVEGNQLLLVYEY 715 (869)
Q Consensus 644 ~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l-----~H~nIv~l~-~--~~~~~~~~~lV~E~ 715 (869)
+.|+.|..+.||+....+| .+++|+.... ..++..|.+++..+ ..|.++... | +....+..++||||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 3466677889999987655 4889988652 12333444444433 234444311 1 12346678999999
Q ss_pred ccCCchh--------------hhhhcCCccc---------ccCCCHHHH-------------------------------
Q 002899 716 MKNNCLS--------------RAIFGKDTEY---------RLKLDWPTR------------------------------- 741 (869)
Q Consensus 716 ~~~gsL~--------------~~l~~~~~~~---------~~~l~~~~~------------------------------- 741 (869)
+++..+. ..+|...... ...-.|...
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 9986542 1122111000 001233221
Q ss_pred HHHHHHHHHHHHHHHh----------cCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceee
Q 002899 742 KKICIGIARGLAYLHE----------DSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 792 (869)
Q Consensus 742 ~~i~~~ia~gL~yLH~----------~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~ 792 (869)
..+...+.+++++|++ ..+..++|||+++.|||++.++.+.|+||+.+..-
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~g 253 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSFD 253 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEEC
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcccC
Confidence 0111223446667763 12345999999999999988889999999987643
No 428
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.74 E-value=9.4e-06 Score=78.66 Aligned_cols=82 Identities=15% Similarity=0.178 Sum_probs=37.9
Q ss_pred cccEEEccCCcCCCCchHhhhcCCCCCEEEcCCCC-CCCCcccccccc-----cceEEEcccc-cCccCCCcccCCCCCc
Q 002899 198 KIQKLHIQGSSLEGPIPASISALTSLTDLRISDLK-GSESAFPKLDKM-----NLKTLILTKC-LIHGEIPDYIGDMTKL 270 (869)
Q Consensus 198 ~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~-~~~~~~~~~~~~-----~L~~L~Ls~N-~i~~~~p~~~~~l~~L 270 (869)
+|+.|+|+++.++......+..+++|+.|+|+++. +++.....+... +|+.|+|++| +|++..-..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 34555555554444333444455555555554442 333332222221 3444455554 2544433444556666
Q ss_pred CEEeccCCC
Q 002899 271 KNIDLSFNN 279 (869)
Q Consensus 271 ~~L~Ls~N~ 279 (869)
++|+|+++.
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 666666653
No 429
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.71 E-value=0.00011 Score=81.89 Aligned_cols=75 Identities=15% Similarity=0.214 Sum_probs=49.2
Q ss_pred CCeeeccCceEEEEEEEc-CCcEEEEEEecccCc-------hhhHHHHHHHHHHHhcCC--Cce-eeEEeEEeeCceEEE
Q 002899 643 ANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR-------QGNREFVNEIGMISAQQH--PNL-VKLYGCCVEGNQLLL 711 (869)
Q Consensus 643 ~~~IG~G~fG~Vyka~~~-~g~~VAvK~~~~~~~-------~~~~~f~~E~~~l~~l~H--~nI-v~l~~~~~~~~~~~l 711 (869)
.+.||.|.++.||++... +++.++||....... ....++..|.+++..+.. +.. .+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 457899999999999754 467899998654321 123456778888887632 333 355544 3445689
Q ss_pred EEEeccCC
Q 002899 712 VYEYMKNN 719 (869)
Q Consensus 712 V~E~~~~g 719 (869)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999864
No 430
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.54 E-value=0.0003 Score=74.52 Aligned_cols=77 Identities=18% Similarity=0.151 Sum_probs=56.7
Q ss_pred CCCCeeeccCceEEEEEEEcCCcEEEEEEecccCchhhHHHHHHHHHHHhcCCC---ceeeEEeEEeeCceEEEEEEecc
Q 002899 641 DPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHP---NLVKLYGCCVEGNQLLLVYEYMK 717 (869)
Q Consensus 641 ~~~~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~---nIv~l~~~~~~~~~~~lV~E~~~ 717 (869)
...+.+|.|..+.||+.++.+|+.|++|+...........|..|++.|+.+.-. -+.+++++. .-++||||++
T Consensus 18 ~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l~ 93 (288)
T 3f7w_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVD 93 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCC
T ss_pred EEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEeec
Confidence 345779999999999999999999999987655444445688899999887422 234455442 3478999998
Q ss_pred CCch
Q 002899 718 NNCL 721 (869)
Q Consensus 718 ~gsL 721 (869)
++..
T Consensus 94 ~~~~ 97 (288)
T 3f7w_A 94 ERPP 97 (288)
T ss_dssp CCCC
T ss_pred ccCC
Confidence 7654
No 431
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.53 E-value=0.00042 Score=74.15 Aligned_cols=140 Identities=15% Similarity=0.155 Sum_probs=92.5
Q ss_pred CCeeeccCceEEEEEEEcCCcEEEEEEecccCchhhHHHHHHHHHHHhcC---CCceeeEEeEEeeCceEEEEEEeccCC
Q 002899 643 ANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQ---HPNLVKLYGCCVEGNQLLLVYEYMKNN 719 (869)
Q Consensus 643 ~~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~---H~nIv~l~~~~~~~~~~~lV~E~~~~g 719 (869)
.+.|+.|....+|+... +++.+++|+.... ....|..|++.|+.+. ...+.+++++....+..++||||+++.
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS 116 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence 45689999999999876 4677889987532 2456888988888774 345778888888888899999999987
Q ss_pred chh-----------hhhhcCCc--cccc---------------CCCHHHHH---HHHH----------------HHHH-H
Q 002899 720 CLS-----------RAIFGKDT--EYRL---------------KLDWPTRK---KICI----------------GIAR-G 751 (869)
Q Consensus 720 sL~-----------~~l~~~~~--~~~~---------------~l~~~~~~---~i~~----------------~ia~-g 751 (869)
.+. ..||.... .... .-+|.... ++.. .++. .
T Consensus 117 ~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l 196 (312)
T 3jr1_A 117 KNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIV 196 (312)
T ss_dssp CCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 652 12343221 1100 12465322 1111 1111 1
Q ss_pred HHHHHh-cCCCCeEEcCCCCCCEEEcCCCcEEEeecC
Q 002899 752 LAYLHE-DSRIKIVHRDIKTSNVLLDKDLNAKISDFG 787 (869)
Q Consensus 752 L~yLH~-~~~~~iiH~Dlk~~NILl~~~~~~kl~DFG 787 (869)
...|.. ..++.++|+|+.+.|++++.++ +.|.|+.
T Consensus 197 ~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 197 ADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 233432 2346689999999999999887 8999984
No 432
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.44 E-value=0.00032 Score=78.67 Aligned_cols=79 Identities=11% Similarity=0.076 Sum_probs=49.8
Q ss_pred CCCeEEcCCCCCCEEEcCCCcEEEeecCCceeecCCCcccccccc-ccccccchhhcccC---CCCchhHHHHHHHHHHH
Q 002899 760 RIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEEDKTHISTRIA-GTIGYMAPEYAMRG---YLTSKADVYSFGVVTLE 835 (869)
Q Consensus 760 ~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~-gt~~y~aPE~~~~~---~~~~k~DvwSlGvil~e 835 (869)
+..++|||+++.|||++.++ ++|+||+.+..-.....-.. ... -...|++|+..... ......++.+....+|+
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGA-YLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWN 308 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHH-HHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHH-HHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHH
Confidence 44589999999999999876 99999999876532211000 000 01356666655321 11224566688888888
Q ss_pred HHcCC
Q 002899 836 IVSGK 840 (869)
Q Consensus 836 lltG~ 840 (869)
.++++
T Consensus 309 ~y~~~ 313 (420)
T 2pyw_A 309 LFNKR 313 (420)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88764
No 433
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.26 E-value=6.5e-05 Score=74.15 Aligned_cols=15 Identities=7% Similarity=0.328 Sum_probs=6.7
Q ss_pred CCCCCeEeccCCcCC
Q 002899 172 LTNLNDLRISDNNFS 186 (869)
Q Consensus 172 l~~L~~L~Ls~N~l~ 186 (869)
-+.|+.|+|++|+|.
T Consensus 69 N~~L~~L~L~~n~ig 83 (197)
T 1pgv_A 69 SKHIEKFSLANTAIS 83 (197)
T ss_dssp CSCCCEEECTTSCCB
T ss_pred CCCcCEEEccCCCCC
Confidence 344444444444443
No 434
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.22 E-value=0.00013 Score=72.07 Aligned_cols=117 Identities=11% Similarity=0.069 Sum_probs=66.6
Q ss_pred ccCCCCCCeEeccCC-cCCCC----CccccCCCCcccEEEccCCcCCC----CchHhhhcCCCCCEEEcCCCCCCCCccc
Q 002899 169 LTKLTNLNDLRISDN-NFSGK----IPEFIGKWKKIQKLHIQGSSLEG----PIPASISALTSLTDLRISDLKGSESAFP 239 (869)
Q Consensus 169 ~~~l~~L~~L~Ls~N-~l~~~----~~~~~~~l~~L~~L~L~~N~l~~----~~~~~l~~l~~L~~L~L~~n~~~~~~~~ 239 (869)
+.+-+.|++|+|++| +|... +.+++..-+.|+.|+|++|.|.. .+...+..-+.|+.|+|+.|.|......
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH
Confidence 344566777777764 66421 33445555667777777777653 3344445555566666555554433222
Q ss_pred ccccccceEEEcccccCccCCCcccCCCCCcCEEeccCCCC---CC----CCchhhhcCCCCCEEEeeCCcC
Q 002899 240 KLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNL---TG----GIPTTFEKLAKTNFMYLTGNKL 304 (869)
Q Consensus 240 ~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l---~~----~~p~~~~~l~~L~~L~Ls~N~l 304 (869)
. +...+..-+.|+.|+|++|.. .. .+...+..-+.|+.|+|+.|.+
T Consensus 117 a-------------------la~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 117 R-------------------LLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp H-------------------HHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred H-------------------HHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 1 223445556688888876533 31 2334566677888888877754
No 435
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.05 E-value=0.0016 Score=71.57 Aligned_cols=144 Identities=19% Similarity=0.252 Sum_probs=84.7
Q ss_pred CeeeccCceEEEEEEEc--------CCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCce-eeEEeEEeeCceEEEEEE
Q 002899 644 NKVGEGGFGSVYKGILS--------DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNL-VKLYGCCVEGNQLLLVYE 714 (869)
Q Consensus 644 ~~IG~G~fG~Vyka~~~--------~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nI-v~l~~~~~~~~~~~lV~E 714 (869)
+.+..|-...+|+.... +++.+++|+.... ........+|.++++.+.-..+ .++++++.. .+|||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e 130 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ 130 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence 45766777889998864 2478899986432 2234556688888877643233 466766543 28999
Q ss_pred eccCCchhh-----------------hhhcCCcccccCC--CHHHHHHHHHHHHH-------------------HHHHHH
Q 002899 715 YMKNNCLSR-----------------AIFGKDTEYRLKL--DWPTRKKICIGIAR-------------------GLAYLH 756 (869)
Q Consensus 715 ~~~~gsL~~-----------------~l~~~~~~~~~~l--~~~~~~~i~~~ia~-------------------gL~yLH 756 (869)
|+++..+.. .+|..+....... -|.++.++..++.. .++.|.
T Consensus 131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 210 (379)
T 3feg_A 131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR 210 (379)
T ss_dssp CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence 999866531 1233221111122 24555555544322 233332
Q ss_pred ----hc-CCCCeEEcCCCCCCEEEcCC----CcEEEeecCCceee
Q 002899 757 ----ED-SRIKIVHRDIKTSNVLLDKD----LNAKISDFGLAKLY 792 (869)
Q Consensus 757 ----~~-~~~~iiH~Dlk~~NILl~~~----~~~kl~DFGla~~~ 792 (869)
.. .+..++|+|+.+.|||++.+ +.+.|+||..+..-
T Consensus 211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~~ 255 (379)
T 3feg_A 211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSYN 255 (379)
T ss_dssp HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEEE
T ss_pred HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCcC
Confidence 22 23347899999999999876 78999999988754
No 436
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.95 E-value=0.011 Score=63.13 Aligned_cols=162 Identities=13% Similarity=0.143 Sum_probs=88.1
Q ss_pred ccHHHHHHHhcCCCCC-----CeeeccCceEEEEEEEcCCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCc--eeeEE
Q 002899 628 YTLRQIKAATNNFDPA-----NKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPN--LVKLY 700 (869)
Q Consensus 628 ~~~~~i~~~t~~f~~~-----~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~n--Iv~l~ 700 (869)
.+.+++...-..|.+. +.|+.|....+|+....+| .+++|+..... ...++..|++++..+.... +.+++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~ 83 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPL 83 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCccc
Confidence 3445555555556552 3466788889999987666 57889876521 1234455666666553212 22333
Q ss_pred eE------EeeCceEEEEEEeccCCchhh--------------hhhcCCcccccC-------CCHHHHHH----------
Q 002899 701 GC------CVEGNQLLLVYEYMKNNCLSR--------------AIFGKDTEYRLK-------LDWPTRKK---------- 743 (869)
Q Consensus 701 ~~------~~~~~~~~lV~E~~~~gsL~~--------------~l~~~~~~~~~~-------l~~~~~~~---------- 743 (869)
.. ....+..+++|+|+++..+.. .+|........+ ..|.....
T Consensus 84 ~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 163 (322)
T 2ppq_A 84 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE 163 (322)
T ss_dssp CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred CCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhh
Confidence 11 123456789999999765421 122110000000 12332111
Q ss_pred --HHHHHHHHHHHHHhc----CCCCeEEcCCCCCCEEEcCCCcEEEeecCCceee
Q 002899 744 --ICIGIARGLAYLHED----SRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 792 (869)
Q Consensus 744 --i~~~ia~gL~yLH~~----~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~ 792 (869)
+...+.+.++++++. .+..++|+|+.+.|||++.+..+.|+||+.+..-
T Consensus 164 ~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~g 218 (322)
T 2ppq_A 164 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACND 218 (322)
T ss_dssp TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEEE
T ss_pred hhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccCc
Confidence 011244456666532 2345899999999999998766689999987653
No 437
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.94 E-value=0.005 Score=66.40 Aligned_cols=145 Identities=15% Similarity=0.128 Sum_probs=73.4
Q ss_pred CeeeccCceE-EEEEEEcCCcEEEEEEecccCchhhHHHHHHHHHHHhcCC--CceeeEEeEEeeCceEEEEEEeccCCc
Q 002899 644 NKVGEGGFGS-VYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQH--PNLVKLYGCCVEGNQLLLVYEYMKNNC 720 (869)
Q Consensus 644 ~~IG~G~fG~-Vyka~~~~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H--~nIv~l~~~~~~~~~~~lV~E~~~~gs 720 (869)
+.|+.|+... +|+....+++.+++|....... .++..|++++..+.. -.+.+++.+..+.+ +++||++++..
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence 3465565544 6677654467777776543321 233455666655532 22446666644443 68999998766
Q ss_pred hhhhhhcCCc---------------------ccccCCCHHHHH--------------------HHHHHHHHHHHHHHh--
Q 002899 721 LSRAIFGKDT---------------------EYRLKLDWPTRK--------------------KICIGIARGLAYLHE-- 757 (869)
Q Consensus 721 L~~~l~~~~~---------------------~~~~~l~~~~~~--------------------~i~~~ia~gL~yLH~-- 757 (869)
+.+.+.+... .....++..... .....+.+.++.+.+
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 6543322110 000011111100 000112222333321
Q ss_pred -cCCCCeEEcCCCCCCEEEcCC----CcEEEeecCCceeec
Q 002899 758 -DSRIKIVHRDIKTSNVLLDKD----LNAKISDFGLAKLYE 793 (869)
Q Consensus 758 -~~~~~iiH~Dlk~~NILl~~~----~~~kl~DFGla~~~~ 793 (869)
..+..++|||+.+.|||++.+ ..+.|+||+.+..-.
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~ 219 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGH 219 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEEC
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCC
Confidence 224458999999999999875 689999999987654
No 438
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.92 E-value=0.0051 Score=66.04 Aligned_cols=145 Identities=12% Similarity=0.053 Sum_probs=81.3
Q ss_pred CeeeccCceEEEEEEEcCCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCc--eeeEEeE-----EeeCceEEEEEEec
Q 002899 644 NKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPN--LVKLYGC-----CVEGNQLLLVYEYM 716 (869)
Q Consensus 644 ~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~n--Iv~l~~~-----~~~~~~~~lV~E~~ 716 (869)
..++ |....||+....+|+.+++|....... ....+..|.+++..+.... +.+++.. ....+..++||||+
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~-~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i 109 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPERW-TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSV 109 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTTS-CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECC
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCCC-CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEec
Confidence 3466 777899998877777899999864311 2345666777776653212 3344432 22345668899999
Q ss_pred cCCchhh--------------hhhcC----CcccccCCCHHHH----HHH---------------HHHHHHHHHHHHhc-
Q 002899 717 KNNCLSR--------------AIFGK----DTEYRLKLDWPTR----KKI---------------CIGIARGLAYLHED- 758 (869)
Q Consensus 717 ~~gsL~~--------------~l~~~----~~~~~~~l~~~~~----~~i---------------~~~ia~gL~yLH~~- 758 (869)
++..+.. .+|.. ........++... ..+ ...+.+.++.+.+.
T Consensus 110 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 189 (328)
T 1zyl_A 110 GGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHW 189 (328)
T ss_dssp CCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 8755420 11211 0000111222211 001 11111223333321
Q ss_pred ---CCCCeEEcCCCCCCEEEcCCCcEEEeecCCceee
Q 002899 759 ---SRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 792 (869)
Q Consensus 759 ---~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~ 792 (869)
.+..++|||+++.|||++ + .+.|+||+.+..-
T Consensus 190 ~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~g 224 (328)
T 1zyl_A 190 REDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARNG 224 (328)
T ss_dssp CSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCEE
T ss_pred hhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCcC
Confidence 234478999999999999 5 8999999987654
No 439
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.89 E-value=0.003 Score=67.18 Aligned_cols=142 Identities=12% Similarity=0.146 Sum_probs=76.5
Q ss_pred CCeeeccCceEEEEEEEcCCcEEEEEEecccCchhhHHHHHHHHHHHhcCCCce-eeEEeEEeeCceEEEEEEec-cCCc
Q 002899 643 ANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNL-VKLYGCCVEGNQLLLVYEYM-KNNC 720 (869)
Q Consensus 643 ~~~IG~G~fG~Vyka~~~~g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nI-v~l~~~~~~~~~~~lV~E~~-~~gs 720 (869)
.+.|+.|....+|+. +.+++|+....... ......|+++++.+....+ .++++++ .+.-++|+||+ ++.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCCcc
Confidence 577999999999998 45888887653221 1233457777766543233 3555543 33346899999 5544
Q ss_pred hhh------------------hhhcCCcccccCCC-HHHHHHHHH--------------HHHHHH----HHHHh-cCCCC
Q 002899 721 LSR------------------AIFGKDTEYRLKLD-WPTRKKICI--------------GIARGL----AYLHE-DSRIK 762 (869)
Q Consensus 721 L~~------------------~l~~~~~~~~~~l~-~~~~~~i~~--------------~ia~gL----~yLH~-~~~~~ 762 (869)
+.. .+|..........+ +.....+.. .+.+.+ +.+.. ..+..
T Consensus 95 l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~ 174 (301)
T 3dxq_A 95 MSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPLA 174 (301)
T ss_dssp CCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCCCE
T ss_pred CCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCce
Confidence 421 12222111100111 111111111 011111 12211 22344
Q ss_pred eEEcCCCCCCEEEcCCCcEEEeecCCceeec
Q 002899 763 IVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 793 (869)
Q Consensus 763 iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~ 793 (869)
++|+|+.+.||+ ..++.+.++||..+..-.
T Consensus 175 l~HgDl~~~Nil-~~~~~~~lID~e~a~~g~ 204 (301)
T 3dxq_A 175 ACHCDPLCENFL-DTGERMWIVDWEYSGMND 204 (301)
T ss_dssp EECSCCCGGGEE-ECSSCEEECCCTTCEEEC
T ss_pred eeccCCCcCCEE-ECCCCEEEEecccccCCC
Confidence 789999999999 667788999999887543
No 440
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.75 E-value=0.0052 Score=68.84 Aligned_cols=73 Identities=18% Similarity=0.221 Sum_probs=49.5
Q ss_pred CCeeeccCceEEEEEEEcC--------CcEEEEEEecccCchhhHHHHHHHHHHHhcCCCce-eeEEeEEeeCceEEEEE
Q 002899 643 ANKVGEGGFGSVYKGILSD--------GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNL-VKLYGCCVEGNQLLLVY 713 (869)
Q Consensus 643 ~~~IG~G~fG~Vyka~~~~--------g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nI-v~l~~~~~~~~~~~lV~ 713 (869)
.+.|+.|....+|+....+ ++.+++|+...... ...+..|..++..+...++ .++++.+.. .+|+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~--~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET--ESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC--HHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCc--HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 3567888889999998753 47899998844211 1455678888887743344 467766542 2899
Q ss_pred EeccCCch
Q 002899 714 EYMKNNCL 721 (869)
Q Consensus 714 E~~~~gsL 721 (869)
||+++.++
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99986454
No 441
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.61 E-value=0.012 Score=66.25 Aligned_cols=74 Identities=14% Similarity=0.046 Sum_probs=48.3
Q ss_pred CCeeeccCceEEEEEEEcC-CcEEEEEEecccCchhhHHHHHHHHHHHhcCCCce-eeEEeEEeeCceEEEEEEeccCCc
Q 002899 643 ANKVGEGGFGSVYKGILSD-GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNL-VKLYGCCVEGNQLLLVYEYMKNNC 720 (869)
Q Consensus 643 ~~~IG~G~fG~Vyka~~~~-g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nI-v~l~~~~~~~~~~~lV~E~~~~gs 720 (869)
.+.|+.|-...+|+....+ +..+++|+...... ...+-..|..++..+...++ .++++.+. . .+||||+++..
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~-~~idR~~E~~vl~~L~~~gl~P~ll~~~~-~---G~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTD-EIINREREKKISCILYNKNIAKKIYVFFT-N---GRIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CC-SCSCHHHHHHHHHHHTTSSSBCCEEEEET-T---EEEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChh-hhcCHHHHHHHHHHHHhcCCCCCEEEEeC-C---eEEEEeeCCcc
Confidence 3568888889999998765 47788998754321 11222578888888865555 46777763 2 25999998755
Q ss_pred h
Q 002899 721 L 721 (869)
Q Consensus 721 L 721 (869)
+
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 5
No 442
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.43 E-value=0.0036 Score=57.54 Aligned_cols=56 Identities=14% Similarity=0.325 Sum_probs=29.5
Q ss_pred EEEeeccccc-ccCCccccCCCCCCeEeccCCcCCCCCccccCCCCcccEEEccCCcCC
Q 002899 153 KLILSSNSFT-GELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLE 210 (869)
Q Consensus 153 ~L~Ls~N~i~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 210 (869)
.++.++++++ ..+|..+. ++|++|+|++|+|+.+.+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4555555554 23333322 34566666666666555555555556666666655554
No 443
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.27 E-value=0.0089 Score=65.48 Aligned_cols=73 Identities=10% Similarity=0.086 Sum_probs=43.1
Q ss_pred CeeeccCceEEEEEEEcC---------CcEEEEEEecccCchhhHHHHHHHHHHHhcCCCce-eeEEeEEeeCceEEEEE
Q 002899 644 NKVGEGGFGSVYKGILSD---------GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNL-VKLYGCCVEGNQLLLVY 713 (869)
Q Consensus 644 ~~IG~G~fG~Vyka~~~~---------g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nI-v~l~~~~~~~~~~~lV~ 713 (869)
+.|+.|....+|+....+ ++.+++|+...... ...+...|.+++..+....+ .++++.. . -++||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEE
Confidence 457778888999988754 26788888754322 12234567777776643333 3666544 2 26899
Q ss_pred EeccCCch
Q 002899 714 EYMKNNCL 721 (869)
Q Consensus 714 E~~~~gsL 721 (869)
||+++..+
T Consensus 114 e~i~G~~l 121 (369)
T 3c5i_A 114 EWLYGDPL 121 (369)
T ss_dssp ECCCSEEC
T ss_pred EEecCCcC
Confidence 99987544
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.73 E-value=0.048 Score=60.05 Aligned_cols=145 Identities=17% Similarity=0.234 Sum_probs=83.3
Q ss_pred CeeeccCceEEEEEEEcC--------CcEEEEEEecccCch-----------hh-------HHHHHHHHHHHhcCCCc-e
Q 002899 644 NKVGEGGFGSVYKGILSD--------GTVIAVKQLSSKSRQ-----------GN-------REFVNEIGMISAQQHPN-L 696 (869)
Q Consensus 644 ~~IG~G~fG~Vyka~~~~--------g~~VAvK~~~~~~~~-----------~~-------~~f~~E~~~l~~l~H~n-I 696 (869)
+.|..|-...+|+....+ .+.|.+++.-..... +. .....|.++++.+...+ .
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456667778999988753 367888887443211 01 11234888887775334 4
Q ss_pred eeEEeEEeeCceEEEEEEeccCCchhh-----------------hhhcCCcccccCCC--HHHHHHHHHHHH--------
Q 002899 697 VKLYGCCVEGNQLLLVYEYMKNNCLSR-----------------AIFGKDTEYRLKLD--WPTRKKICIGIA-------- 749 (869)
Q Consensus 697 v~l~~~~~~~~~~~lV~E~~~~gsL~~-----------------~l~~~~~~~~~~l~--~~~~~~i~~~ia-------- 749 (869)
.++++++..+ +|+||+++-+|.. .+|........... |..+.++..++.
T Consensus 138 Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 4777776432 8999999765521 12222111111222 334444443321
Q ss_pred --------------HHH----HHHHhc-CCCCeEEcCCCCCCEEEcCC------CcEEEeecCCceee
Q 002899 750 --------------RGL----AYLHED-SRIKIVHRDIKTSNVLLDKD------LNAKISDFGLAKLY 792 (869)
Q Consensus 750 --------------~gL----~yLH~~-~~~~iiH~Dlk~~NILl~~~------~~~kl~DFGla~~~ 792 (869)
.-+ ++|... .+..++|+|+.+.|||++++ +.+.++||..|...
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~~ 281 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSYN 281 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEEE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCcC
Confidence 112 233332 23346799999999999887 78999999988654
No 445
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.64 E-value=0.041 Score=59.43 Aligned_cols=34 Identities=26% Similarity=0.384 Sum_probs=29.0
Q ss_pred CCCeEEcCCCCCCEEEcCCCcEEEeecCCceeec
Q 002899 760 RIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 793 (869)
Q Consensus 760 ~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~ 793 (869)
+..++|+|+.+.||++++++.+.|+||+.+....
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~~ 238 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPMLAP 238 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEEEC
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCeeCC
Confidence 3458999999999999988889999999876543
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.66 E-value=0.084 Score=58.65 Aligned_cols=143 Identities=10% Similarity=0.093 Sum_probs=84.1
Q ss_pred CeeeccCceEEEEEEEcC--------CcEEEEEEecccCchhhHHHHHHHHHHHhcCCCce-eeEEeEEeeCceEEEEEE
Q 002899 644 NKVGEGGFGSVYKGILSD--------GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNL-VKLYGCCVEGNQLLLVYE 714 (869)
Q Consensus 644 ~~IG~G~fG~Vyka~~~~--------g~~VAvK~~~~~~~~~~~~f~~E~~~l~~l~H~nI-v~l~~~~~~~~~~~lV~E 714 (869)
+.+..|-...+|+....+ ++.+++|+..... ....+-.+|.++++.+.-..+ .++++.+. -++|||
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~e 150 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADFP----EGRIEE 150 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEEE
Confidence 456667778999988753 5788999865432 222234567777777643333 35565332 268999
Q ss_pred eccCCchhh-----------------hhhcCCc-----c---cccCCCHHHHHHHHHHH-------------------HH
Q 002899 715 YMKNNCLSR-----------------AIFGKDT-----E---YRLKLDWPTRKKICIGI-------------------AR 750 (869)
Q Consensus 715 ~~~~gsL~~-----------------~l~~~~~-----~---~~~~l~~~~~~~i~~~i-------------------a~ 750 (869)
|+++..+.. .+|..+. . ...+.-|.++.++..++ ..
T Consensus 151 fI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~ 230 (424)
T 3mes_A 151 FIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKILE 230 (424)
T ss_dssp CCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHHH
T ss_pred EeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHHH
Confidence 999866421 1121111 0 11122344444443322 22
Q ss_pred HHHHHHh---------------------cCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceee
Q 002899 751 GLAYLHE---------------------DSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 792 (869)
Q Consensus 751 gL~yLH~---------------------~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~ 792 (869)
.+++|.+ ..+..++|+|+.+.||+ +.++.+.|+||..+...
T Consensus 231 e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~~ 292 (424)
T 3mes_A 231 EIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAIN 292 (424)
T ss_dssp HHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEEE
T ss_pred HHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCcC
Confidence 2333321 12234789999999999 88889999999998754
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=91.88 E-value=0.28 Score=54.06 Aligned_cols=30 Identities=23% Similarity=0.424 Sum_probs=25.3
Q ss_pred eEEcCCCCCCEEE------cCCCcEEEeecCCceee
Q 002899 763 IVHRDIKTSNVLL------DKDLNAKISDFGLAKLY 792 (869)
Q Consensus 763 iiH~Dlk~~NILl------~~~~~~kl~DFGla~~~ 792 (869)
++|+|+.+.|||+ +++..++++||..|..-
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~n 281 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSYN 281 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccCC
Confidence 4699999999999 34677999999998754
No 448
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=87.53 E-value=1.8 Score=42.89 Aligned_cols=105 Identities=10% Similarity=0.074 Sum_probs=67.0
Q ss_pred CCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCceeecCCCc
Q 002899 718 NNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEEDKT 797 (869)
Q Consensus 718 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~~ 797 (869)
.-||.+.|...+ .++++++++.++.|.+.+|.-+-.... + ..+=+.|..|++..+|.+.+.+ +.+.
T Consensus 32 ~vSL~eIL~~~~----~PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~------- 97 (229)
T 2yle_A 32 ALSLEEILRLYN----QPINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD------- 97 (229)
T ss_dssp EEEHHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C----------
T ss_pred cccHHHHHHHcC----CCcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc-------
Confidence 347888886554 389999999999999999877622110 1 1233446889999999888764 1110
Q ss_pred cccccccccccccchhhcccCCCCchhHHHHHHHHHHHHHcCCCCC
Q 002899 798 HISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNT 843 (869)
Q Consensus 798 ~~~~~~~gt~~y~aPE~~~~~~~~~k~DvwSlGvil~elltG~~p~ 843 (869)
.....+.|||... ...+.+.=|||+|+++|.-+-=..|-
T Consensus 98 ------~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e 136 (229)
T 2yle_A 98 ------AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKE 136 (229)
T ss_dssp ---------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred ------ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCc
Confidence 0112566888653 35578889999999999988654443
No 449
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=74.28 E-value=0.36 Score=54.26 Aligned_cols=60 Identities=13% Similarity=0.134 Sum_probs=17.7
Q ss_pred CCCeeeccCceEEEEEEEcC-CcEEEE------EEeccc--CchhhHHHHHHHHHHHhcCCCceeeEEeEEe
Q 002899 642 PANKVGEGGFGSVYKGILSD-GTVIAV------KQLSSK--SRQGNREFVNEIGMISAQQHPNLVKLYGCCV 704 (869)
Q Consensus 642 ~~~~IG~G~fG~Vyka~~~~-g~~VAv------K~~~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~~~~~ 704 (869)
+.+.|| ||.||+|.+.. ..+||| |..+.. ..+....|.+|..+++..+|||+++.+++..
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 456676 99999999864 357888 765542 2233457888999999999999999888754
No 450
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=71.55 E-value=5.5 Score=28.28 Aligned_cols=7 Identities=57% Similarity=1.099 Sum_probs=3.2
Q ss_pred hhHHHHH
Q 002899 583 IMAAIVG 589 (869)
Q Consensus 583 ~i~~iv~ 589 (869)
+++++++
T Consensus 14 Ia~~vVG 20 (44)
T 2jwa_A 14 IISAVVG 20 (44)
T ss_dssp HHHHHHH
T ss_pred hHHHHHH
Confidence 4444444
No 451
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=70.56 E-value=14 Score=36.31 Aligned_cols=83 Identities=10% Similarity=0.063 Sum_probs=59.4
Q ss_pred CCCceeeEEeEEeeCceEEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCC
Q 002899 692 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTS 771 (869)
Q Consensus 692 ~H~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~ 771 (869)
.||+++.. ..-.+++.+.+.++.-+.+-=...+ ...+...+++++.+|+....+++. -+|--+.|.
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~i--------k~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P~ 108 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNI--------KSFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAPD 108 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGG--------GGSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHHH--------HhcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEecc
Confidence 68988866 5666667766666643322111222 246788999999999997766654 368889999
Q ss_pred CEEEcCCCcEEEeecCC
Q 002899 772 NVLLDKDLNAKISDFGL 788 (869)
Q Consensus 772 NILl~~~~~~kl~DFGl 788 (869)
||+++.++.+++.=.|+
T Consensus 109 NL~f~~~~~p~i~~RGi 125 (215)
T 4ann_A 109 ELFFTRDGLPIAKTRGL 125 (215)
T ss_dssp GEEECTTSCEEESCCEE
T ss_pred eEEEcCCCCEEEEEccC
Confidence 99999999999987665
No 452
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=65.16 E-value=9.7 Score=27.09 Aligned_cols=13 Identities=38% Similarity=0.509 Sum_probs=6.5
Q ss_pred chhhHHHHHHHHH
Q 002899 581 VMIMAAIVGASVL 593 (869)
Q Consensus 581 ~~~i~~iv~~~v~ 593 (869)
..|.++++++.++
T Consensus 11 ~~IA~gVVgGv~~ 23 (44)
T 2ks1_B 11 PSIATGMVGALLL 23 (44)
T ss_dssp SSSTHHHHHHHHH
T ss_pred ceEEeehhHHHHH
Confidence 3455566654433
No 453
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=63.41 E-value=14 Score=26.32 Aligned_cols=28 Identities=18% Similarity=0.077 Sum_probs=13.0
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhhhhcc
Q 002899 580 HVMIMAAIVGASVLLVLLILFIMRWKGC 607 (869)
Q Consensus 580 ~~~~i~~iv~~~v~l~~~~~~~~~~~~~ 607 (869)
...-+++.+.+++++++++++++++|+.
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RRr~~ 40 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRRRHI 40 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhhhHh
Confidence 3344444334444444555555554433
No 454
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=60.75 E-value=13 Score=26.34 Aligned_cols=13 Identities=23% Similarity=0.547 Sum_probs=6.5
Q ss_pred chhhHHHHHHHHH
Q 002899 581 VMIMAAIVGASVL 593 (869)
Q Consensus 581 ~~~i~~iv~~~v~ 593 (869)
..|..+++++.++
T Consensus 10 ~aIA~gVVgGv~~ 22 (44)
T 2l2t_A 10 PLIAAGVIGGLFI 22 (44)
T ss_dssp HHHHHHHHHHHHH
T ss_pred ceEEEeehHHHHH
Confidence 3455556654433
No 455
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=59.12 E-value=18 Score=35.71 Aligned_cols=83 Identities=13% Similarity=0.107 Sum_probs=59.6
Q ss_pred CCCceeeEEeEEeeCceEEEEEEeccCCchhhhhhcCCcccccCCCHHHHHHHHHHHHHHHH-HHHhcCCCCeEEcCCCC
Q 002899 692 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLA-YLHEDSRIKIVHRDIKT 770 (869)
Q Consensus 692 ~H~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~-yLH~~~~~~iiH~Dlk~ 770 (869)
.||++ -...-.+++.+.+.++--+++.=...+. .++...+++++.+|+.... +++. -+|--+.|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~--------~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P 112 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR--------KTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCP 112 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH--------TSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH--------hcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeC
Confidence 68888 4445567778777777543432233332 4677889999998888666 5543 46888999
Q ss_pred CCEEEcCCCcEEEeecCCc
Q 002899 771 SNVLLDKDLNAKISDFGLA 789 (869)
Q Consensus 771 ~NILl~~~~~~kl~DFGla 789 (869)
+||+++.++.+++.=.|+-
T Consensus 113 ~NL~f~~~~~p~i~hRGi~ 131 (219)
T 4ano_A 113 ENLMFNRALEPFFLHVGVK 131 (219)
T ss_dssp GGEEECTTCCEEESCCEET
T ss_pred ceEEEeCCCcEEEEEcCCc
Confidence 9999999999999877753
No 456
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=55.68 E-value=10 Score=26.35 Aligned_cols=17 Identities=18% Similarity=0.430 Sum_probs=8.7
Q ss_pred ccchhhHHHHHHHHHHH
Q 002899 579 NHVMIMAAIVGASVLLV 595 (869)
Q Consensus 579 ~~~~~i~~iv~~~v~l~ 595 (869)
....++.+++++.++++
T Consensus 11 ~~~~I~~~vv~Gv~ll~ 27 (41)
T 2k9y_A 11 GNLAVIGGVAVGVVLLL 27 (41)
T ss_dssp SSTHHHHHHHHHHHHHH
T ss_pred ceEEEEeehhHHHHHHH
Confidence 33445555555555544
No 457
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=49.38 E-value=21 Score=25.36 Aligned_cols=27 Identities=15% Similarity=-0.007 Sum_probs=13.0
Q ss_pred chhhHHHHHHHHHHHHHHHHHhhhhcc
Q 002899 581 VMIMAAIVGASVLLVLLILFIMRWKGC 607 (869)
Q Consensus 581 ~~~i~~iv~~~v~l~~~~~~~~~~~~~ 607 (869)
..-+++.+.+.+++++++++++++|+.
T Consensus 13 A~gVVgGv~~v~ii~~~~~~~~RRRr~ 39 (44)
T 2l2t_A 13 AAGVIGGLFILVIVGLTFAVYVRRKSI 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEeehHHHHHHHHHHHHHHHHhhhhhh
Confidence 344444444444455555555555443
No 458
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=47.70 E-value=33 Score=29.06 Aligned_cols=46 Identities=17% Similarity=0.210 Sum_probs=23.3
Q ss_pred cCCCCCchhhcCccccccccccccccCCCCCccccCCCCccEEEeec
Q 002899 112 RLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSS 158 (869)
Q Consensus 112 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 158 (869)
.++.+...+|.++++|+.+.|..+ ++.+-..+|.++.+|+.+.+..
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 344444555555555555555543 3323344555555555555544
No 459
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=44.21 E-value=45 Score=28.21 Aligned_cols=49 Identities=12% Similarity=0.110 Sum_probs=34.9
Q ss_pred ccccCCCCCccccCCCCccEEEeecccccccCCccccCCCCCCeEeccCC
Q 002899 134 GNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDN 183 (869)
Q Consensus 134 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N 183 (869)
+..++.+...+|.++.+|+.+.|..+ ++.+-..+|.++.+|+.+.+...
T Consensus 5 g~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 5 GEPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred CCccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 34556556667888888888888774 44455677888888888888664
No 460
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=43.71 E-value=16 Score=25.07 Aligned_cols=11 Identities=9% Similarity=-0.152 Sum_probs=5.0
Q ss_pred chhhHHHHHHH
Q 002899 581 VMIMAAIVGAS 591 (869)
Q Consensus 581 ~~~i~~iv~~~ 591 (869)
...+++++.++
T Consensus 10 ~GaIAGiVvG~ 20 (38)
T 2k1k_A 10 GGEIVAVIFGL 20 (38)
T ss_dssp HHHHHHHHHHH
T ss_pred CCceeeeehHH
Confidence 34445544443
No 461
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=42.32 E-value=31 Score=25.62 Aligned_cols=17 Identities=35% Similarity=0.587 Sum_probs=7.4
Q ss_pred hhhHHHHHHHHHHHHHH
Q 002899 582 MIMAAIVGASVLLVLLI 598 (869)
Q Consensus 582 ~~i~~iv~~~v~l~~~~ 598 (869)
.++.+++++.+++++++
T Consensus 11 iIi~svl~GLLLL~Lii 27 (54)
T 2l8s_A 11 VILLSAFAGLLLLMLLI 27 (54)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34444445444443333
No 462
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=35.18 E-value=54 Score=22.45 Aligned_cols=25 Identities=16% Similarity=0.299 Sum_probs=15.0
Q ss_pred CCccchhhHHHHHHHHHHHHHHHHH
Q 002899 577 KKNHVMIMAAIVGASVLLVLLILFI 601 (869)
Q Consensus 577 ~~~~~~~i~~iv~~~v~l~~~~~~~ 601 (869)
......++++.+.+..+++++++++
T Consensus 10 ~GaIAGiVvG~v~gv~li~~l~~~~ 34 (38)
T 2k1k_A 10 GGEIVAVIFGLLLGAALLLGILVFR 34 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCceeeeehHHHHHHHHHHHHHHHH
Confidence 3456677777777665555544443
No 463
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=27.99 E-value=77 Score=23.54 Aligned_cols=15 Identities=27% Similarity=0.733 Sum_probs=6.3
Q ss_pred hhHHHHHHHHHHHHH
Q 002899 583 IMAAIVGASVLLVLL 597 (869)
Q Consensus 583 ~i~~iv~~~v~l~~~ 597 (869)
++.+++++.+++.++
T Consensus 15 Ii~svl~GLllL~li 29 (54)
T 2knc_A 15 VLVGVLGGLLLLTIL 29 (54)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 344444444444333
No 464
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=27.97 E-value=4.6e+02 Score=29.92 Aligned_cols=85 Identities=13% Similarity=0.100 Sum_probs=52.3
Q ss_pred eEEeEEeeCceEEEEEEeccCCchhhhhhcC----------Ccccc--cCCCHHHHHHHHHHHHH--HHHHHHhcCCCCe
Q 002899 698 KLYGCCVEGNQLLLVYEYMKNNCLSRAIFGK----------DTEYR--LKLDWPTRKKICIGIAR--GLAYLHEDSRIKI 763 (869)
Q Consensus 698 ~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~----------~~~~~--~~l~~~~~~~i~~~ia~--gL~yLH~~~~~~i 763 (869)
+.+.+........+ .|++++.++.+.+... ..... ....|..+.+++..+|- .+.|+=.-
T Consensus 403 ~~Y~Vipls~~~Gl-IE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YILGi----- 476 (614)
T 3ls8_A 403 TPYKVLATSTKHGF-MQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILGV----- 476 (614)
T ss_dssp CCCCEEESSSSEEE-EECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHTC-----
T ss_pred eccEEEEecCCCce-EEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheeeec-----
Confidence 44444444444444 4777765555544221 11100 11245667777776654 46777543
Q ss_pred EEcCCCCCCEEEcCCCcEEEeecCCce
Q 002899 764 VHRDIKTSNVLLDKDLNAKISDFGLAK 790 (869)
Q Consensus 764 iH~Dlk~~NILl~~~~~~kl~DFGla~ 790 (869)
+|=.++|||++.+|++.=+|||.+-
T Consensus 477 --gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 477 --GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp --CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred --cCCCCcceeEcCCCCEeeeehHHhh
Confidence 5778999999999999999999863
No 465
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=27.32 E-value=4.4e+02 Score=30.55 Aligned_cols=45 Identities=22% Similarity=0.163 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHH--HHHHHHhcCCCCeEEcCCCCCCEEEcCCCcEEEeecCCce
Q 002899 739 PTRKKICIGIAR--GLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAK 790 (869)
Q Consensus 739 ~~~~~i~~~ia~--gL~yLH~~~~~~iiH~Dlk~~NILl~~~~~~kl~DFGla~ 790 (869)
..+.+++..+|- .+.|+=.- +|=.++|||++.+|++.=+|||.+-
T Consensus 529 ~ar~nF~~SlA~~Svv~YILGl-------GDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 529 EVMDTYIKSCAGYCVITYLLGV-------GDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTC-------CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHHccC-------CCCCCcceEEeCCCCEEEEeehhhh
Confidence 455666666553 46677443 6889999999999999999999863
No 466
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=22.12 E-value=30 Score=23.25 Aligned_cols=7 Identities=57% Similarity=1.075 Sum_probs=3.6
Q ss_pred hhHHHHH
Q 002899 583 IMAAIVG 589 (869)
Q Consensus 583 ~i~~iv~ 589 (869)
+++++++
T Consensus 10 IaagVvg 16 (35)
T 1iij_A 10 IIATVVG 16 (35)
T ss_dssp HHHHHHH
T ss_pred eHHHHHH
Confidence 4455555
No 467
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=21.59 E-value=1.7e+02 Score=20.43 Aligned_cols=13 Identities=23% Similarity=0.672 Sum_probs=5.4
Q ss_pred hhHHHHHHHHHHH
Q 002899 583 IMAAIVGASVLLV 595 (869)
Q Consensus 583 ~i~~iv~~~v~l~ 595 (869)
++.+++++.+++.
T Consensus 13 Ii~s~l~GLllL~ 25 (42)
T 2k1a_A 13 VLVGVLGGLLLLT 25 (42)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3344444444333
Done!