Query 002903
Match_columns 868
No_of_seqs 156 out of 811
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 06:02:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002903.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002903hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1jqo_A Phosphoenolpyruvate car 100.0 3E-247 1E-251 2191.9 86.7 865 1-868 105-970 (970)
2 1jqn_A Pepcase, PEPC, phosphoe 100.0 3E-239 1E-243 2113.9 79.6 804 1-868 78-883 (883)
3 3odm_A Pepcase, PEPC, phosphoe 100.0 3.2E-65 1.1E-69 576.2 20.0 320 420-773 136-501 (560)
4 1e0t_A Pyruvate kinase, PK; ph 93.6 0.13 4.4E-06 58.9 8.2 99 412-532 177-276 (470)
5 1sgj_A Citrate lyase, beta sub 92.7 0.064 2.2E-06 57.2 3.9 99 423-536 93-193 (284)
6 1dxe_A 2-dehydro-3-deoxy-galac 92.0 0.088 3E-06 55.4 3.8 107 413-533 84-216 (256)
7 3qtg_A Pyruvate kinase, PK; TI 91.9 0.23 7.7E-06 56.6 7.2 104 425-547 198-301 (461)
8 3gr4_A Pyruvate kinase isozyme 91.8 0.24 8.3E-06 57.5 7.3 98 413-532 248-345 (550)
9 1a3w_A Pyruvate kinase; allost 91.7 0.12 4E-06 59.7 4.7 97 414-532 200-296 (500)
10 3hqn_D Pyruvate kinase, PK; TI 90.5 0.26 8.8E-06 56.8 5.9 97 414-532 199-295 (499)
11 3qqw_A Putative citrate lyase; 90.3 0.26 8.9E-06 53.9 5.5 100 423-535 111-225 (332)
12 3khd_A Pyruvate kinase; malari 90.2 0.31 1.1E-05 56.3 6.2 87 427-532 234-320 (520)
13 3qll_A Citrate lyase; beta bar 89.8 0.19 6.5E-06 54.6 4.0 105 416-535 123-227 (316)
14 3gg8_A Pyruvate kinase; malari 89.7 0.3 1E-05 56.3 5.6 88 426-532 224-311 (511)
15 3r4i_A Citrate lyase; TIM beta 89.7 0.51 1.7E-05 51.8 7.2 105 423-540 110-229 (339)
16 3qz6_A HPCH/HPAI aldolase; str 89.3 0.18 6.2E-06 53.3 3.2 97 426-533 91-214 (261)
17 2v5j_A 2,4-dihydroxyhept-2-ENE 88.4 0.52 1.8E-05 50.5 6.0 104 416-533 107-237 (287)
18 3t05_A Pyruvate kinase, PK; te 87.8 0.58 2E-05 55.1 6.3 95 416-532 202-296 (606)
19 2e28_A Pyruvate kinase, PK; al 87.5 0.57 1.9E-05 55.1 6.0 89 426-532 189-277 (587)
20 1izc_A Macrophomate synthase i 86.5 0.2 7E-06 55.0 1.5 92 427-530 121-250 (339)
21 2vws_A YFAU, 2-keto-3-deoxy su 80.9 0.71 2.4E-05 48.8 2.7 105 415-533 85-216 (267)
22 1u5h_A CITE; TIM barrel, struc 79.5 0.92 3.1E-05 48.1 3.0 86 424-530 85-177 (273)
23 3oyz_A Malate synthase; TIM ba 71.3 2.7 9.2E-05 47.5 4.1 124 404-535 92-230 (433)
24 4drs_A Pyruvate kinase; glycol 57.2 17 0.00059 42.1 7.3 91 426-533 232-327 (526)
25 1fa2_A Beta-amylase; TIM barre 38.2 17 0.00057 41.6 3.2 50 487-542 46-102 (498)
26 1wdp_A Beta-amylase; (beta/alp 37.6 17 0.00059 41.5 3.2 50 487-542 45-101 (495)
27 2xfr_A Beta-amylase; hydrolase 35.2 20 0.00068 41.3 3.2 50 487-542 43-99 (535)
28 4eys_A MCCC family protein; MC 27.7 24 0.00083 38.5 2.2 11 490-500 105-115 (346)
29 2ols_A Phosphoenolpyruvate syn 27.0 47 0.0016 40.4 4.7 94 426-532 643-751 (794)
30 2xz9_A Phosphoenolpyruvate-pro 21.4 1E+02 0.0034 33.4 5.6 145 426-594 138-304 (324)
31 3o3m_A Alpha subunit 2-hydroxy 21.2 2.7E+02 0.0093 30.7 9.2 62 75-136 149-211 (408)
No 1
>1jqo_A Phosphoenolpyruvate carboxylase; beta barrel, carbon dioxide fixation, lyase; 3.00A {Zea mays} SCOP: c.1.12.3
Probab=100.00 E-value=3.2e-247 Score=2191.89 Aligned_cols=865 Identities=80% Similarity=1.269 Sum_probs=780.2
Q ss_pred CcchhhHHHHhHHHHHHHHHhhhcCCCCCcCCCCCcccHHHHHHHHHHhcCCCHHHHHHHhhcCceeEeeecCCCcchhh
Q 002903 1 MLNLANLAEELQIAHRRRIKKLKKGDFADENSATTESDIEETFKRLVGELNKSPEEIFDALKNQTVDLVLTAHPTQSVRR 80 (868)
Q Consensus 1 ~f~L~NiAE~~~~~r~~r~~~~~~~~~~~~~~~~~~~s~~~~~~~L~~~~g~~~e~i~~~L~~~~i~pVlTAHPTEa~Rr 80 (868)
||||+|||||+|++|++|......++.++....+.++||+.++.+|+++.|+++++|+++|+++.|+|||||||||++||
T Consensus 105 ~~~L~NiAEe~~~~r~~r~~~~~~~~~~~~~~~~~~~sl~~~~~~L~~~~g~~~~~i~~~L~~~~v~pVlTAHPTE~~Rr 184 (970)
T 1jqo_A 105 MLNLANLAEEVQIAHRRRNSKLKKGGFADEGSATTESDIEETLKRLVSEVGKSPEEVFEALKNQTVDLVFTAHPTQSARR 184 (970)
T ss_dssp HHHHHHHHHHHHHHHHHHCC-----------------CHHHHHHHHHTTSCCCHHHHHHHHHTCEEEEEEECCTTCCSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccccccccCCCcchHHHHHHHHHHHcCCCHHHHHHHHhcCceeeeeccCCccccHH
Confidence 79999999999999877642211132211112346799999999995588999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHHHHHHHhcccccccCCCChHHHHHHHHHHHHHHhhhhHHHHHHHHH
Q 002903 81 SLLQKHARIRNCLAQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRTQPTPQDEMRAGMSYFHETIWKGVPKFLRRVD 160 (868)
Q Consensus 81 tvL~~~~~I~~~L~~~d~~~~~~~e~~~~~~~L~~~i~~LW~T~eir~~kPtv~DE~~~~l~y~~~~l~~avP~~~~~l~ 160 (868)
|||+||++|+++|.++++.++|+.|+++++++|+++|+.||||||||+.||||.||++|||+||++|||++||++|++++
T Consensus 185 Tvl~k~~~I~~lL~~l~~~~lt~~e~~~~~~~L~~~I~~lW~TdeiR~~kPtv~DE~~~gl~y~~~sl~~avP~~~r~l~ 264 (970)
T 1jqo_A 185 SLLQKNARIRNCLTQLNAKDITDDDKQELDEALQREIQAAFRTDEIRRAQPTPQAEMRYGMSYIHETVWKGVPKFLRRVD 264 (970)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCCHHHHHHHHHHHHHHHHHHHHSCCSCCSCCCHHHHHHHHHHHHTTTTTTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhCChhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCCCCCccccCcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccCCHHHHHhHH
Q 002903 161 TALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYYSQIEDLMFEMSMWRCSDELRHRAD 240 (868)
Q Consensus 161 ~~l~~~~~~~~~~~~~~~i~fgSWiGGDRDGNP~VTa~vT~~~~~~~r~~al~~y~~~l~~L~~~LS~~~~s~~l~~~~~ 240 (868)
++|.++|.+..+|...|+|+|||||||||||||||||+||++|+.++|++|+++|++++++|+++||++.||++|++.++
T Consensus 265 ~al~~~~~~~~l~~~~~~i~fGSWiGGDRDGNP~VTaevT~~~~~~~r~~al~~Y~~~l~~L~~eLS~s~~s~eL~~~~~ 344 (970)
T 1jqo_A 265 TALKNIGINERLPYNVSLIRFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYIDQIEELMFELSMWRCNDELRVRAE 344 (970)
T ss_dssp HHHHTTTCCSCCCTTCCSEEEEECTTTBCTTCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
T ss_pred HHHHHhcCCCCCCCCCCcccccCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHH
Confidence 99988754355665556699999999999999999999999999999999999999999999999999999999998776
Q ss_pred Hhhhhchhhh-hhhhhhhccCCCCChHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccCCCCChHHhhhHHHHHHHHHH
Q 002903 241 VLHRSSKKDA-KHYIEFWKQIPPNEPYRVILGDVRDKLYQTRERVRQLLAHGISDIPEEAVFTNVEQFLEPLELCYRSLC 319 (868)
Q Consensus 241 ~~~~~~~~~~-~~~~~~~~~~~~~EpyR~~l~~i~~rL~~t~~~~~~~~~~~~~~~~~~~~y~~~~ell~dL~~i~~sL~ 319 (868)
...+..++.. .+|.+++..++++||||++|..|++||.+|+.++...+.+.....+....|.+++||++||++|++||+
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~EPYR~~L~~i~~rL~~T~~~~~~~l~~~~~~~~~~~~Y~~~~ell~dL~~i~~SL~ 424 (970)
T 1jqo_A 345 ELHSSSGSKVTKYYIEFWKQIPPNEPYRVILGHVRDKLYNTRERARHLLASGVSEISAESSFTSIEEFLEPLELCYKSLC 424 (970)
T ss_dssp HHHHHHCCCCCTTCSSSCSCCCTTSHHHHHHHHHHHHHHHHHHHHHHHHHSSCCSSCSTTSCCSHHHHHHHHHHHHHHHH
T ss_pred HHHhhcccchhcccccccccCCCCCcHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcccCCCCHHHHHHHHHHHHHHHH
Confidence 6443333222 355555566778999999999999999999987665443322111223479999999999999999999
Q ss_pred hcCCccchhhHHHHHHHHHHHhCCcccccccccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhHhcCCCCCCCCC
Q 002903 320 SCGDRAIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHTDVIDAITKHLEIGSYREWSEEKRQEWLLSELSGKRPLFGPD 399 (868)
Q Consensus 320 ~~~~~~~a~~~L~~lir~v~~FGfhla~LDIRQ~S~~H~~al~el~~~~g~~~Y~~l~E~~r~~~L~~eL~~~rpl~~~~ 399 (868)
+||+..+|+|.|.+|||+|++|||||++|||||||++|++|++||++++|+++|.+|||++|++||.+||+++|||+++.
T Consensus 425 ~~g~~~iA~g~L~~lir~V~~FGfhLa~LDiRQ~S~~H~~al~el~~~~g~~~Y~~l~E~~r~~~L~~eL~~~rpL~~~~ 504 (970)
T 1jqo_A 425 DCGDKAIADGSLLDLLRQVFTFGLSLVKLDIRQESERHTDVIDAITTHLGIGSYREWPEDKRQEWLLSELRGKRPLLPPD 504 (970)
T ss_dssp HTSCCTTTTTHHHHHHHHHHHHTTSSSEEEEECCHHHHHHHHHHHHHHHTSCCSTTSCHHHHHHHHHHHHHCCSCCCCTT
T ss_pred HCCChhhhhhhHHHHHHHHHHhCeeccccchhhcchHHHHHHHHHHHHcCCCCcccCCHHHHHHHHHHHhcCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCchhHHHhhcCCChhhHHHHHHHHHHcCCCCCCccccccCChHHHhcHHHHHHHHhcc
Q 002903 400 LPKTEEIADVLETFHVIAELPADNFGAYIISMATAPSDVLAVELLQRECHVKQPLRVVPLFEKLADLEAAPAALARLFSV 479 (868)
Q Consensus 400 ~~~s~~~~e~l~~f~~i~~~~~~a~g~yIISmt~s~sDvL~V~~L~ke~Gl~~~l~VvPLFETi~DL~~a~~il~~Ll~~ 479 (868)
.++|++++++|+||++++++|+++|++||||||+++||||+|++|+|++|+.++|+|||||||++||+|||.||++||++
T Consensus 505 ~~~s~~~~evL~~f~~i~~~g~~a~~~yIISmt~s~sDvL~V~~L~ke~Gl~~~l~VVPLFETi~DL~~a~~im~~ll~~ 584 (970)
T 1jqo_A 505 LPQTDEIADVIGAFHVLAELPPDSFGPYIISMATAPSDVLAVELLQRECGVRQPLPVVPLFERLADLQSAPASVERLFSV 584 (970)
T ss_dssp CCCCHHHHHHHHHHHHHHHSCSTTEEEEEETTCCSTHHHHHHHHHHHHTCCSSCCCEEEEECSHHHHHTHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHHHHHHHhChhhhCeEEeCCCCCHHHHHHHHHHHHHcCCCCCCCeeCCCCCHHHHHhHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCeeEEEEeeccCCCchhhhhHHHHHHHHHHHHHHHHHHhCCeEEEecCCCCCCCCCCCchhhhhhcCCCCcc
Q 002903 480 DWYRNRINGKQEVMIGYSDSGKDAGRFSAAWQLYKAQEELIKVAKQYGIKLTMFHGRGGTVGRGGGPTHLAILSQPPDTI 559 (868)
Q Consensus 480 p~yr~~l~~~QeVMlGYSDS~KDgG~laa~W~Ly~Aq~~L~~v~~~~gV~l~~FHGRGGsvgRGGGPt~~aI~aqP~gtv 559 (868)
|+||+|++++|||||||||||||||+++|+|+||+||++|+++|++|||+++|||||||||||||||+|+||+||||||+
T Consensus 585 p~yr~~l~~~QeVMLGYSDS~KD~G~laA~w~ly~Aq~~L~~v~~~~gV~l~lFHGRGGsvgRGGgp~~~ailaqP~gsv 664 (970)
T 1jqo_A 585 DWYMDRIKGKQQVMVGYSDSGKDAGRLSAAWQLYRAQEEMAQVAKRYGVKLTLFHGRGGTVGRGGGPTHLAILSQPPDTI 664 (970)
T ss_dssp HHHHHHHTSEEEEEEESTTHHHHSCHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCSSGGGTCCCHHHHHHTSCTTSC
T ss_pred hHHHHhhCCeEEEEEecccccccccHHHHHHHHHHHHHHHHHHHHHcCCcEEEecCCCCCCCCCCCChHHHHHcCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCceEeeccchhhHhhcCChhHHHHHHHHHHHHHHHccCCCCCCCChhHHHHHHHHHHHHHHHHHHhhhcCCchhHHHHh
Q 002903 560 HGSLRVTVQGEVIEQSFGEEHLCFRTLQRFTAATLEHGMRPPISPKPEWRTMMDEMAVIATEEYRSIVFKEPRFVEYFRL 639 (868)
Q Consensus 560 ~g~irvTeQGEvI~~kYg~~~~A~r~LE~~~aa~l~~sl~~~~~~~~~~~~~m~~ls~~s~~~Yr~lv~~~p~F~~yF~~ 639 (868)
+|.+|+|||||||++|||+|++|.||||++++|++++++.+++.++++|+++|+.||+.|+++||++||++|+|++||++
T Consensus 665 ~G~ir~TeQGEvI~~kYg~p~~a~~nLe~~~aA~l~a~l~~~~~~~~~~~~~m~~la~~s~~~Yr~lv~~~p~Fv~yF~~ 744 (970)
T 1jqo_A 665 NGSIRVTVQGEVIEFCFGEEHLCFQTLQRFTAATLEHGMHPPVSPKPEWRKLMDEMAVVATEEYRSVVVKEARFVEYFRS 744 (970)
T ss_dssp TTEEEEEEEHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHSCCCCCCHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHH
T ss_pred CCceEEEeecHHHHHhcCChHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHH
Confidence 99999999999999999999999999999999999999876666778999999999999999999999999999999999
Q ss_pred hCchhHhhhCCCCCCCCccCCCCCCCCccccchhhhhhhhcccccchhhHHHHHHHHHHhCCCcHHHHHHHHhcCchHHH
Q 002903 640 ATPELEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGAAFKHVIQKDIRNLHMLQEMYNNWPFFRV 719 (868)
Q Consensus 640 aTPi~ei~~lnIGSRPakR~~~~~ledLRAIPWVFaWtQ~R~~lPgWyGvGsAL~~~~~~~~~~~~~L~~my~~wpfF~~ 719 (868)
+||+.||++|||||||+||+++++++|||||||||||||+|++||||||+|+||++++++++++++.|++||++||||++
T Consensus 745 aTP~~ei~~LnIGSRPa~R~~~~~i~~LRAIPWvfsWtQ~R~~lP~w~G~GsAl~~~~~~~~~~l~~L~~my~~wPfF~t 824 (970)
T 1jqo_A 745 ATPETEYGRMNIGSRPAKRRPGGGITTLRAIPWIFSWTQTRFHLPVWLGVGAAFKFAIDKDVRNFQVLKEMYNEWPFFRV 824 (970)
T ss_dssp HSCCGGGGGGCCSCCC--------CTTCCSHHHHHHHHHTTCCHHHHTTHHHHHHHHHHHCTTHHHHHHHHHHHCHHHHH
T ss_pred hChHHHHHhCccCCCCccCCCCCCcccccccchhhHHHhccCCcchhhhHHHHHHHHHHcCchhHHHHHHHHHhChHHHH
Confidence 99999999999999999999888999999999999999999999999999999999999887678999999999999999
Q ss_pred HHHHHHHHHHhccHHHHHHHHhccCChhhHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCchHHHHHHhhhhhhhhhHHH
Q 002903 720 TIDLVEMVFAKGNHKIAALYDQLLVSKDLWSFGEKLRVNYEETKGLLLQIAGHKDLLEGDPYLKQRLRLRDAYITTLNVC 799 (868)
Q Consensus 720 ~idnvem~LaKaD~~Ia~~Y~~l~~d~~~~~i~~~I~~E~~~T~~~vl~itg~~~Ll~~~p~l~~si~~R~pyvdpLn~l 799 (868)
+|||++|+|+|+|+.||++|+++++|++++.||++|++||++|+++|++|||+++||+++|+|++||++|||||||||++
T Consensus 825 ~ldn~eM~laK~Dl~iA~~Y~~ll~d~~~~~i~~~i~~E~~~T~~~ll~itg~~~LL~~~p~l~~si~lR~pyvdpLn~l 904 (970)
T 1jqo_A 825 TLDLLEMVFAKGDPGIAGLYDELLVAEELKPFGKQLRDKYVETQQLLLQIAGHKDILEGDPFLKQGLVLRNPYITTLNVF 904 (970)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHTSCSTTHHHHHHHHHHHHHHHHHHHHHHTCSSTTSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccChHHHHHHHhhhHHhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCccCCccchhhhhcccCCchhHHhhhccCCCCCcchHHHHHHHHHHHHhhhccCC
Q 002903 800 QAYTLKRIRDPNYHVKVRPHISREIMESESVKPADELVKLNLSSEYAPGLEDTLILTMKGIAAGLQNTG 868 (868)
Q Consensus 800 QvelL~r~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~lTIngIAaGlrnTG 868 (868)
||+||||+|+.+...+..+..+++..+ +. ..+||+++|+...+.+.++++|++|||||||||||||
T Consensus 905 QvelL~r~R~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~l~~~lllTInGIAAGlrNTG 970 (970)
T 1jqo_A 905 QAYTLKRIRDPNFKVTPQPPLSKEFAD--EN-KPAGLVKLNPASEYPPGLEDTLILTMKGIAAGMQNTG 970 (970)
T ss_dssp HHHHHHHHHCTTCCCCCCCCCSCC----------CTTTTTSSSCSSCTTHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHhcCCCCCccccccccccc--cc-chhhhhccCcccccchHHHHHHHHHHHHHHHhcccCC
Confidence 999999999732100001111111101 11 2449999999999999999999999999999999999
No 2
>1jqn_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta barrel, Mn2+ and DCDP complex, lyase; HET: DCO; 2.35A {Escherichia coli} SCOP: c.1.12.3 PDB: 1fiy_A* 1qb4_A
Probab=100.00 E-value=3.4e-239 Score=2113.85 Aligned_cols=804 Identities=44% Similarity=0.764 Sum_probs=751.9
Q ss_pred CcchhhHHHHhHHHHHHHHHhhhcCCCCCcCCCCCcccHHHHHHHHHHhc-CCCHHHHHHHhhcCceeEeeecCCCcchh
Q 002903 1 MLNLANLAEELQIAHRRRIKKLKKGDFADENSATTESDIEETFKRLVGEL-NKSPEEIFDALKNQTVDLVLTAHPTQSVR 79 (868)
Q Consensus 1 ~f~L~NiAE~~~~~r~~r~~~~~~~~~~~~~~~~~~~s~~~~~~~L~~~~-g~~~e~i~~~L~~~~i~pVlTAHPTEa~R 79 (868)
||||+|||||+|++|++|. . .+.++||+.++.+| ++. |+++++|++.|+++.|+|||||||||++|
T Consensus 78 ~~~L~NiAE~~~~~r~~~~-~-----------~~~~~sl~~~~~~l-~~~~g~~~~~i~~~L~~~~i~pVlTAHPTE~~R 144 (883)
T 1jqn_A 78 FLNLANTAEQYHSISPKGE-A-----------ASNPEVIARTLRKL-KNQPELSEDTIKKAVESLSLELVLTAHPTEITR 144 (883)
T ss_dssp HHHHHHHHHHHHHHCTTTT-C-----------TTCTHHHHHHHHHH-HTCTTCCHHHHHHHHHTCCEEEEECCCTTCCBS
T ss_pred HHHHHHHHHHHHHHHHHhh-c-----------CCCCccHHHHHHHH-HHhcCCCHHHHHHHHhcCeeeeeeccCCccchH
Confidence 7999999999999965443 1 13559999999999 788 99999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHHHHHHHhcccccccCCCChHHHHHHHHHHHHHHhhhhHHHHHHHH
Q 002903 80 RSLLQKHARIRNCLAQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRTQPTPQDEMRAGMSYFHETIWKGVPKFLRRV 159 (868)
Q Consensus 80 rtvL~~~~~I~~~L~~~d~~~~~~~e~~~~~~~L~~~i~~LW~T~eir~~kPtv~DE~~~~l~y~~~~l~~avP~~~~~l 159 (868)
||||+||++|+++|.++++.++|+.|+++++++|+++|+.||||++||..||||.||++||++||++|||++||++|+++
T Consensus 145 rtvl~~~~~I~~lL~~~~~~~l~~~e~~~~~~~L~~~I~~lW~T~eiR~~kPtv~DE~~~gl~y~~~sl~~avP~~~~~l 224 (883)
T 1jqn_A 145 RTLIHKMVEVNACLKQLDNKDIADYEHNQLMRRLRQLIAQSWHTDEIRKLRPSPVDEAKWGFAVVENSLWQGVPNYLREL 224 (883)
T ss_dssp SCCHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHHHHHCCCBCSSCCCHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhCcchhcccCCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCCCccccCcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccCCHHHHHhH
Q 002903 160 DTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYYSQIEDLMFEMSMWRCSDELRHRA 239 (868)
Q Consensus 160 ~~~l~~~~~~~~~~~~~~~i~fgSWiGGDRDGNP~VTa~vT~~~~~~~r~~al~~y~~~l~~L~~~LS~~~~s~~l~~~~ 239 (868)
+++|.+.++ ..+|...+||+|||||||||||||||||+||++|+.++|++++++|++++++|.++||++.||+++.+.+
T Consensus 225 ~~~l~~~~~-~~~~~~~~~i~fgSWiGGDRDGNP~VTa~vT~~~~~~~r~~al~~y~~~l~~L~~~LS~~~~s~~l~~~~ 303 (883)
T 1jqn_A 225 NEQLEENLG-YKLPVEFVPVRFTSWMGGDRDGNPNVTADITRHVLLLSRWKATDLFLKDIQVLVSELSMVEATPELLALV 303 (883)
T ss_dssp HHHHHHHTS-CCCCTTCCCEEEEECTTTBCTTCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
T ss_pred HHHHHHhcC-CCCCCCCCccccCCcCccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 999988754 3455556789999999999999999999999999999999999999999999999999999999998744
Q ss_pred HHhhhhchhhhhhhhhhhccCCCCChHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccCCCCChHHhhhHHHHHHHHHH
Q 002903 240 DVLHRSSKKDAKHYIEFWKQIPPNEPYRVILGDVRDKLYQTRERVRQLLAHGISDIPEEAVFTNVEQFLEPLELCYRSLC 319 (868)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~EpyR~~l~~i~~rL~~t~~~~~~~~~~~~~~~~~~~~y~~~~ell~dL~~i~~sL~ 319 (868)
+. .+++||||++|..|++||.+|..++...+.+.. ..+.+..|.+++||++||..|++||.
T Consensus 304 ~~------------------~~~~EPyR~~l~~i~~rL~~t~~~~~~~~~~~~-~~~~~~~y~~~~ell~dL~~i~~SL~ 364 (883)
T 1jqn_A 304 GE------------------EGAAEPYRYLMKNLRSRLMATQAWLEARLKGEE-LPKPEGLLTQNEELWEPLYACYQSLQ 364 (883)
T ss_dssp CT------------------TSSSSHHHHHHHHHHHHHHHHHHHHHHHHTTCC-CCCCSSCCCCHHHHHHHHHHHHHHHH
T ss_pred hh------------------hcCCCcHHHHHHHHHHHHHHHHHHHHhhhccCC-CCCcccCCCCHHHHHHHHHHHHHHHH
Confidence 32 256899999999999999999987665443220 11123459999999999999999999
Q ss_pred hcCCccchhhHHHHHHHHHHHhCCcccccccccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhHhcCCCCCCCCC
Q 002903 320 SCGDRAIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHTDVIDAITKHLEIGSYREWSEEKRQEWLLSELSGKRPLFGPD 399 (868)
Q Consensus 320 ~~~~~~~a~~~L~~lir~v~~FGfhla~LDIRQ~S~~H~~al~el~~~~g~~~Y~~l~E~~r~~~L~~eL~~~rpl~~~~ 399 (868)
+||+..+|+|.|.++|++|++|||||++|||||||++|++|++||++++|+++|.+|||++|++||.+||+++|||.+++
T Consensus 365 ~~g~~~ia~~~L~~lir~v~~FGfhLa~LDiRQ~S~~H~~al~el~~~~g~~~Y~~l~E~~r~~~L~~eL~~~rpl~~~~ 444 (883)
T 1jqn_A 365 ACGMGIIANGDLLDTLRRVKCFGVPLVRIDIRQESTRHTEALGELTRYLGIGDYESWSEADKQAFLIRELNSKRPLLPRN 444 (883)
T ss_dssp HTTCHHHHTTHHHHHHHHHHHTTTTSSEEEEEEEHHHHHHHHHHHHHHHTSCCGGGSCHHHHHHHHHHHHHCSSCCSCSS
T ss_pred HCCChhhHHhHHHHHHHHHHhhCcccCCccccccchHHHHHHHHHHHHcCCCCcccCCHHHHHHHHHHHhcCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCchhHHHhhcCCChhhHHHHHHHHHHcCCCCCCccccccCChHHHhcHHHHHHHHhcc
Q 002903 400 LPKTEEIADVLETFHVIAELPADNFGAYIISMATAPSDVLAVELLQRECHVKQPLRVVPLFEKLADLEAAPAALARLFSV 479 (868)
Q Consensus 400 ~~~s~~~~e~l~~f~~i~~~~~~a~g~yIISmt~s~sDvL~V~~L~ke~Gl~~~l~VvPLFETi~DL~~a~~il~~Ll~~ 479 (868)
.++|++++++|+||++++++++++|++||||||+++||||+|++|+|++|+..+|+|||||||++||+|||.||++||++
T Consensus 445 ~~~s~~~~~~L~~f~~i~~~~~~a~~~yIISmt~s~sDvL~V~~L~ke~Gl~~~l~VvPLFETi~DL~~a~~im~~ll~~ 524 (883)
T 1jqn_A 445 WQPSAETREVLDTCQVIAEAPQGSIAAYVISMAKTPSDVLAVHLLLKEAGIGFAMPVAPLFETLDDLNNANDVMTQLLNI 524 (883)
T ss_dssp CCCCHHHHHHHHHHHHHHHSCTTSEEEEEEETCCSHHHHHHHHHHHHTTTCCSCCCEEEEECSHHHHHHHHHHHHHHHHS
T ss_pred CCCCHHHHHHHHHHHHHHHhhhhhcCeEEeCCCCCHHHHHHHHHHHHHhCCCCCcCeeCCCCCHHHHHhHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999988999999999999999999999999999
Q ss_pred HHHHhhcCCeeEEEEeeccCCCchhhhhHHHHHHHHHHHHHHHHHHhCCeEEEecCCCCCCCCCCCchhhhhhcCCCCcc
Q 002903 480 DWYRNRINGKQEVMIGYSDSGKDAGRFSAAWQLYKAQEELIKVAKQYGIKLTMFHGRGGTVGRGGGPTHLAILSQPPDTI 559 (868)
Q Consensus 480 p~yr~~l~~~QeVMlGYSDS~KDgG~laa~W~Ly~Aq~~L~~v~~~~gV~l~~FHGRGGsvgRGGGPt~~aI~aqP~gtv 559 (868)
|+||+|++++|||||||||||||||+++|+|+||+||++|+++|++|||+++|||||||||||||||+|+||+||||||+
T Consensus 525 p~yr~~l~~~qeVMlGYSDS~KD~G~laA~w~ly~Aq~~L~~v~~~~gV~l~lFhGRGGsvgRGGgp~~~ailaqp~gsv 604 (883)
T 1jqn_A 525 DWYRGLIQGKQMVMIGYSDSAKDAGVMAASWAQYQAQDALIKTCEKAGIELTLFHGRGGSIGRGGAPAHAALLSQPPGSL 604 (883)
T ss_dssp HHHHHHTTTEEEEEECHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECSSTGGGSCHHHHHHHHHTSCTTTT
T ss_pred hHHHHhhCCeEEEEEeeccccccccHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCchHHHHHhCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCceEeeccchhhHhhcCChhHHHHHHHHHHHHHHHccCCCCCCCChhHHHHHHHHHHHHHHHHHHhhhcCCchhHHHHh
Q 002903 560 HGSLRVTVQGEVIEQSFGEEHLCFRTLQRFTAATLEHGMRPPISPKPEWRTMMDEMAVIATEEYRSIVFKEPRFVEYFRL 639 (868)
Q Consensus 560 ~g~irvTeQGEvI~~kYg~~~~A~r~LE~~~aa~l~~sl~~~~~~~~~~~~~m~~ls~~s~~~Yr~lv~~~p~F~~yF~~ 639 (868)
+|++|+|||||||++|||+|++|.+|||++++|++++++.+++.|+++|+++|+.||+.|+++||++|+++|+|++||++
T Consensus 605 ~g~~r~TeQGEvI~~kY~~p~~a~~nLe~~~~A~l~~~~~~~~~~~~~~~~~m~~la~~s~~~Yr~lv~~~p~fv~yf~~ 684 (883)
T 1jqn_A 605 KGGLRVTEQGEMIRFKYGLPEITVSSLSLYTGAILEANLLPPPEPKESWRRIMDELSVISCDVYRGYVRENKDFVPYFRS 684 (883)
T ss_dssp TTCEEEEECGGGHHHHHSSHHHHHHHHHHHHHHHHHHHHSCCCCCCHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHH
T ss_pred CCceEEEecchHHHHhcCChHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHH
Confidence 99999999999999999999999999999999999999876666788999999999999999999999999999999999
Q ss_pred hCchhHhhhCCCCCCCCccCCCCCCCCccccchhhhhhhhcccccchhhHHHHHHHHHHhCCCcHHHHHHHHhcCchHHH
Q 002903 640 ATPELEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGAAFKHVIQKDIRNLHMLQEMYNNWPFFRV 719 (868)
Q Consensus 640 aTPi~ei~~lnIGSRPakR~~~~~ledLRAIPWVFaWtQ~R~~lPgWyGvGsAL~~~~~~~~~~~~~L~~my~~wpfF~~ 719 (868)
+||+.||+.|||||||+||+++++++|||||||||||||+|+++|+|||+|+||+++++++ .++.|++||++||||++
T Consensus 685 ~tP~~ei~~L~IGSRPa~R~~~~~i~~LRAIPwvfsW~Q~R~~lP~w~G~GsAl~~~~~~~--~~~~L~~my~~wpfFrt 762 (883)
T 1jqn_A 685 ATPEQELGKLPLGSRPAKRRPTGGVESLRAIPWIFAWTQNRLMLPAWLGAGTALQKVVEDG--KQSELEAMCRDWPFFST 762 (883)
T ss_dssp HSCHHHHHHSSCSSCC------CCGGGSCHHHHHHHHHHTTCCGGGTTTHHHHHHHHHTTT--CHHHHHHHHHHCHHHHH
T ss_pred hChHHHHHhccccCCccccCCCCCccccccchhhhHHHHhccCchhhhhHHHHHHHHHhcC--hHHHHHHHHHhChHHHH
Confidence 9999999999999999999988899999999999999999999999999999999999877 69999999999999999
Q ss_pred HHHHHHHHHHhccHHHHHHH-HhccCChhhHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCchHHHHHHhhhhhhhhhHH
Q 002903 720 TIDLVEMVFAKGNHKIAALY-DQLLVSKDLWSFGEKLRVNYEETKGLLLQIAGHKDLLEGDPYLKQRLRLRDAYITTLNV 798 (868)
Q Consensus 720 ~idnvem~LaKaD~~Ia~~Y-~~l~~d~~~~~i~~~I~~E~~~T~~~vl~itg~~~Ll~~~p~l~~si~~R~pyvdpLn~ 798 (868)
+|||++|+|+|+|+.||++| +.|++| ++++||+.|++||++|+++|++|||+++||+++|++++||++|||||||||+
T Consensus 763 ~l~n~em~laK~Dl~iA~~Y~~~Lv~~-~~~~i~~~i~~E~~~T~~~ll~itg~~~Ll~~~p~l~~si~~R~pyv~pLn~ 841 (883)
T 1jqn_A 763 RLGMLEMVFAKADLWLAEYYDQRLVDK-ALWPLGKELRNLQEEDIKVVLAIANDSHLMADLPWIAESIQLRNIYTDPLNV 841 (883)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHSCT-TTHHHHHHHHHHHHHHHHHHHHHTTCSSTTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHhCCH-HHHHHHHHHHHHHHHHHHHHHHHhCCccccccChHHHHHHHhhhHHhhHHHH
Confidence 99999999999999999999 777766 7889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCccCCccchhhhhcccCCchhHHhhhccCCCCCcchHHHHHHHHHHHHhhhccCC
Q 002903 799 CQAYTLKRIRDPNYHVKVRPHISREIMESESVKPADELVKLNLSSEYAPGLEDTLILTMKGIAAGLQNTG 868 (868)
Q Consensus 799 lQvelL~r~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~lTIngIAaGlrnTG 868 (868)
+||+||||+|+.+ . +. .++.+.++++|++|||||||||||||
T Consensus 842 lQvelL~r~R~~~-----------~--~~---------------~~~~~~l~~~l~lTinGIAaGlRNTG 883 (883)
T 1jqn_A 842 LQAELLHRSRQAE-----------K--EG---------------QEPDPRVEQALMVTIAGIAAGMRNTG 883 (883)
T ss_dssp HHHHHHHHHHHHH-----------H--HT---------------CCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHHHHHhcC-----------C--Cc---------------ccccHHHHHHHHHHHHHHHHHhccCC
Confidence 9999999999621 0 00 00126799999999999999999999
No 3
>3odm_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta-barrel, lyase; 2.95A {Clostridium perfringens}
Probab=100.00 E-value=3.2e-65 Score=576.24 Aligned_cols=320 Identities=19% Similarity=0.206 Sum_probs=268.4
Q ss_pred CCCchhHHHhhcCCChhhHHHHHHHHHH-c-------CC---CCCCccccccCChHHHhcHHHHHHHHhccHHHHhhc--
Q 002903 420 PADNFGAYIISMATAPSDVLAVELLQRE-C-------HV---KQPLRVVPLFEKLADLEAAPAALARLFSVDWYRNRI-- 486 (868)
Q Consensus 420 ~~~a~g~yIISmt~s~sDvL~V~~L~ke-~-------Gl---~~~l~VvPLFETi~DL~~a~~il~~Ll~~p~yr~~l-- 486 (868)
+.++|+.||||||+++||||+|++|+|+ + |. .++|+|||||||++||.||++||+++|++ ||. +
T Consensus 136 g~~aI~~yIISMT~sasDlL~V~~L~k~~aGL~~~e~g~~~~~~~i~VVPLFETieDL~~a~~Il~~ll~~--~r~-l~~ 212 (560)
T 3odm_A 136 GTPAISEVVVPMIETGKEISEFQDRVNSVVDMGNKNYKTKLDLNSVRIIPLVEDVPALANIDRILDEHYEI--EKS-KGH 212 (560)
T ss_dssp SSCSCCEEEESSCCSHHHHHHHHHHHHHHHHHHHHHCSSCCCTTSSEEEEEECCHHHHHTTHHHHHHHHHH--HHH-TTC
T ss_pred CCcccCeEEecCCCCHHHHHHHHHHHHHHhcccccccCCCCCCCCCCeECCcCCHHHHHhhHHHHHHHHHH--HHH-hcc
Confidence 6789999999999999999999999965 3 33 25899999999999999999999999997 777 7
Q ss_pred -CCeeEEEEeeccCCCchhhhhHHHHHHHHHHHHHHHHHHhCCeEEEecCCCCCCCCCCCchhh--hhhcCCCCcccCce
Q 002903 487 -NGKQEVMIGYSDSGKDAGRFSAAWQLYKAQEELIKVAKQYGIKLTMFHGRGGTVGRGGGPTHL--AILSQPPDTIHGSL 563 (868)
Q Consensus 487 -~~~QeVMlGYSDS~KDgG~laa~W~Ly~Aq~~L~~v~~~~gV~l~~FHGRGGsvgRGGGPt~~--aI~aqP~gtv~g~i 563 (868)
++.|||||||||||||||++||+|+||+||.+|+++|+++||+++|||||||||||||||++. +|++||||+ +
T Consensus 213 ~~~~QeVMLGYSDSaKDgG~laS~waly~Aq~~L~~~~~e~gI~l~lFHGRGGtvgRGGgp~~~a~aiLaQppG~----~ 288 (560)
T 3odm_A 213 ILKDLRIMIARSDTAMSYGLISGVLSVLMAVDGAYKWGEKHGVTISPILGCGSLPFRGHFSEENIDEILATYSGI----K 288 (560)
T ss_dssp CCSEEEEEEESHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEECCSSGGGTCCCTTCHHHHHHHTTTC----C
T ss_pred cCCeEEEEEeeccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCcEEEEeeCCCCCcCCCCCHHHHHHHHhCCCCC----c
Confidence 679999999999999999999999999999999999999999999999999999999999985 599999999 6
Q ss_pred EeeccchhhHhhcCChhHHHHHHHHHHHHHHHccCCCCCC-CC---hhHHHHHHHHHHHHHHHHHHhhhcCCchhHHHHh
Q 002903 564 RVTVQGEVIEQSFGEEHLCFRTLQRFTAATLEHGMRPPIS-PK---PEWRTMMDEMAVIATEEYRSIVFKEPRFVEYFRL 639 (868)
Q Consensus 564 rvTeQGEvI~~kYg~~~~A~r~LE~~~aa~l~~sl~~~~~-~~---~~~~~~m~~ls~~s~~~Yr~lv~~~p~F~~yF~~ 639 (868)
++|||| +.||+.|. +.+++|+.+.+..++++ |. .+|+++|+.+++.|+++||++|.+.++|+.||+.
T Consensus 289 tvTeQg---a~KYd~p~------~~y~~AI~~a~~~~p~~~P~~~~~e~~e~m~~la~~s~~~YR~~V~~~ad~I~~~a~ 359 (560)
T 3odm_A 289 TFTFQS---ALRYDHGE------EATKHAVRELKEKIAQSKPRNFSEEDKDLMKEFIGICSKHYLQTFLKVIDTVSFVSD 359 (560)
T ss_dssp EEEECH---HHHHTTCH------HHHHHHHHHHHHHGGGCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eEeeec---hhhcCCCH------HHHHHHHHHHHhCCCCcCccccchHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHH
Confidence 799999 99999999 89999999988765444 43 4899999999999999999999999999999999
Q ss_pred hCchhHhhhCCCC-----CCCCcc--------------------CCCCCCCCccccchhhhhhhhcccccchhhHHHHHH
Q 002903 640 ATPELEYGRMNIG-----SRPSKR--------------------KPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGAAFK 694 (868)
Q Consensus 640 aTPi~ei~~lnIG-----SRPakR--------------------~~~~~ledLRAIPWVFaWtQ~R~~lPgWyGvGsAL~ 694 (868)
+||..+.+.|+|| ||=.-- -...++.=-|||.++.|| -+=-+-|...|+|++|+
T Consensus 360 ~tP~rR~RkLhiG~lfGYsR~~~~~~~~~~~~~d~v~~~e~~~~~~~~~~~lPRAI~Ft~al-YSiGlPPelig~~~~l~ 438 (560)
T 3odm_A 360 FIPKNRDRLTKAKTGLEYNREVANLDNVADLVKDEVLKQEILSIDNSKEYAVPRAISFTGAM-YTLGMPPELMGMGRALN 438 (560)
T ss_dssp TSCCCSCBCC------------CCHHHHHTTCCCHHHHHHHHCSCCCSCCCCCCHHHHHHHH-HHTTCCGGGTTHHHHHH
T ss_pred hCChhhhccccccccccccccCCCccccccccccchhhhhhhcccccccccCCchhhhhHHH-HhcCCChHHhcchhhHH
Confidence 9999999999999 774321 001235567999999999 67778899999999998
Q ss_pred HHHHhC-CCcHHHHHHHHhcCchHHHHHHHHHHHHHhccHHHHHHHHhccCChhhHHHHHHHHHHHHHHHHHHHHHhCCC
Q 002903 695 HVIQKD-IRNLHMLQEMYNNWPFFRVTIDLVEMVFAKGNHKIAALYDQLLVSKDLWSFGEKLRVNYEETKGLLLQIAGHK 773 (868)
Q Consensus 695 ~~~~~~-~~~~~~L~~my~~wpfF~~~idnvem~LaKaD~~Ia~~Y~~l~~d~~~~~i~~~I~~E~~~T~~~vl~itg~~ 773 (868)
++.++= .+.++.|.+.|.. .|.|+..|..|.+.-.-.. -+.+.+.++++...+.+.++.|-+
T Consensus 439 ~~k~~l~~~~ld~l~~~yp~---------------l~~Dl~~a~~y~~~~~~~~--~l~~~~~~~v~eDi~~~~~~~~i~ 501 (560)
T 3odm_A 439 EIKTKYGQEGIDKLLEIYPI---------------LRKDLAFAARFANGGVSKK--IIDEEARQEYKEDMKYVNEILNLG 501 (560)
T ss_dssp HHHHHHCHHHHHHHHHHSTT---------------HHHHHHHHHTTCCTTTTTT--TSCHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHhhhcCHHHHHHHHHHhhh---------------HHHHHHHHHHhcCHHHHHH--hcCHHHHHHHHHHHHHHHHHhCCC
Confidence 877331 1247778777776 6889999988876422221 244566777777788888888753
No 4
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A
Probab=93.57 E-value=0.13 Score=58.93 Aligned_cols=99 Identities=16% Similarity=0.125 Sum_probs=82.5
Q ss_pred HHHHHHhCCCCchhHHHhhcCCChhhHHHHHHHHHHc-CCCCCCccccccCChHHHhcHHHHHHHHhccHHHHhhcCCee
Q 002903 412 TFHVIAELPADNFGAYIISMATAPSDVLAVELLQREC-HVKQPLRVVPLFEKLADLEAAPAALARLFSVDWYRNRINGKQ 490 (868)
Q Consensus 412 ~f~~i~~~~~~a~g~yIISmt~s~sDvL~V~~L~ke~-Gl~~~l~VvPLFETi~DL~~a~~il~~Ll~~p~yr~~l~~~Q 490 (868)
-++.+.+.+.+. .++||.++++|+.++--+.++. |- .+.|++..||.+.++|.++|++. . +
T Consensus 177 Di~~~l~~gvD~---I~lsfV~saeDv~~~~~~l~~~~~~--~i~IiakIEt~eav~nldeI~~~--s---------D-- 238 (470)
T 1e0t_A 177 DLIFGCEQGVDF---VAASFIRKRSDVIEIREHLKAHGGE--NIHIISKIENQEGLNNFDEILEA--S---------D-- 238 (470)
T ss_dssp HHHHHHHHTCSE---EEESSCCSHHHHHHHHHHHHTTTCT--TCEEEEEECSHHHHHTHHHHHHH--S---------S--
T ss_pred HHHHHHHcCCCE---EEECCCCCHHHHHHHHHHHHHhcCC--CceEEEEECCHHHHHhHHHHHHH--C---------C--
Confidence 334444555554 4789999999999998888877 64 68899999999999999999976 1 1
Q ss_pred EEEEeeccCCCchhhhhHHHHHHHHHHHHHHHHHHhCCeEEE
Q 002903 491 EVMIGYSDSGKDAGRFSAAWQLYKAQEELIKVAKQYGIKLTM 532 (868)
Q Consensus 491 eVMlGYSDS~KDgG~laa~W~Ly~Aq~~L~~v~~~~gV~l~~ 532 (868)
-||+|-.|=+.+-|. ..+..+|+++...|+++|+.+..
T Consensus 239 gImVargDLgveig~----e~v~~~qk~ii~~araaGkpvI~ 276 (470)
T 1e0t_A 239 GIMVARGDLGVEIPV----EEVIFAQKMMIEKCIRARKVVIT 276 (470)
T ss_dssp EEEEEHHHHHHHSCH----HHHHHHHHHHHHHHHHHTCEEEE
T ss_pred EEEECchHhhhhcCH----HHHHHHHHHHHHHHHHcCCCEEE
Confidence 699999999988885 56999999999999999998754
No 5
>1sgj_A Citrate lyase, beta subunit; trimer, TIM barrel, structural genomics, PSI, protein structure initiative; 1.84A {Deinococcus radiodurans} SCOP: c.1.12.5
Probab=92.74 E-value=0.064 Score=57.24 Aligned_cols=99 Identities=14% Similarity=0.159 Sum_probs=78.1
Q ss_pred chhHHHhhcCCChhhHHHHHHHHHHcCCCCCCccccccCChHHHhcHHHHHHHHhccHHHHhhcCCeeEEEEeeccCCCc
Q 002903 423 NFGAYIISMATAPSDVLAVELLQRECHVKQPLRVVPLFEKLADLEAAPAALARLFSVDWYRNRINGKQEVMIGYSDSGKD 502 (868)
Q Consensus 423 a~g~yIISmt~s~sDvL~V~~L~ke~Gl~~~l~VvPLFETi~DL~~a~~il~~Ll~~p~yr~~l~~~QeVMlGYSDS~KD 502 (868)
.+...+++|++++.|+-.+.-+.++.| ..+.|+|+.||...+.|+++|.. ..+..-+|+|-.|=+.+
T Consensus 93 g~~~i~lPkv~s~~~v~~~~~~l~~~g--~~~~i~~~IEt~~av~~~~eIa~-----------~~~vd~l~iG~~DL~~~ 159 (284)
T 1sgj_A 93 ELSGVVVPKLEMGAEARQVAQMLQERS--LPLPILAGLETGAGVWNAREIME-----------VPEVAWAYFGAEDYTTD 159 (284)
T ss_dssp TSSEEEECSCCSHHHHHHHHHHHHHTT--CCCCEEEEECSHHHHHTHHHHHT-----------STTEEEEEECHHHHHHH
T ss_pred cCCEEEeCCCCCHHHHHHHHHHHHhcC--CCeEEEEEecCHHHHHHHHHHHc-----------CCCCcEEEECHHHHHHH
Confidence 345679999999999999988888876 37889999999999999998872 13567799998877666
Q ss_pred hhhh--hHHHHHHHHHHHHHHHHHHhCCeEEEecCC
Q 002903 503 AGRF--SAAWQLYKAQEELIKVAKQYGIKLTMFHGR 536 (868)
Q Consensus 503 gG~l--aa~W~Ly~Aq~~L~~v~~~~gV~l~~FHGR 536 (868)
-|.- ...-.+..++.+++..|+++|+.+ ++|=
T Consensus 160 lg~~~~~~~~~~~~a~~~iv~aa~a~G~~~--i~~v 193 (284)
T 1sgj_A 160 LGGKRTPGGLEVLYARSQVALAARLTGVAA--LDIV 193 (284)
T ss_dssp HTCCCCSSCGGGHHHHHHHHHHHHHHTCEE--EECC
T ss_pred hCCCCCCChHHHHHHHHHHHHHHHHcCCCe--eeCC
Confidence 6631 112357889999999999999986 4443
No 6
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=91.99 E-value=0.088 Score=55.39 Aligned_cols=107 Identities=14% Similarity=0.205 Sum_probs=80.2
Q ss_pred HHHHHhCCCCchhHHHhhcCCChhhHHHHHHHHHHc--CC----------------------CCCCccccccCChHHHhc
Q 002903 413 FHVIAELPADNFGAYIISMATAPSDVLAVELLQREC--HV----------------------KQPLRVVPLFEKLADLEA 468 (868)
Q Consensus 413 f~~i~~~~~~a~g~yIISmt~s~sDvL~V~~L~ke~--Gl----------------------~~~l~VvPLFETi~DL~~ 468 (868)
++.+-+.+.++ .+++|++++.|+-++.-.++.. |. ...+.|+++.||.+.+.|
T Consensus 84 i~~~l~~g~~g---I~~P~V~s~~ev~~~~~~~~~~p~g~Rg~~~~~~~~~~g~~~~~~~~~~~~~~v~~~IEt~~av~~ 160 (256)
T 1dxe_A 84 IKRLLDIGFYN---FLIPFVETKEEAELAVASTRYPPEGIRGVSVSHRANMFGTVADYFAQSNKNITILVQIESQQGVDN 160 (256)
T ss_dssp HHHHHHTTCCE---EEESCCCSHHHHHHHHHTTSCTTTCCCCCCSSSGGGGGGTSTTHHHHHTTSCEEEEEECSHHHHHT
T ss_pred HHHHHhcCCce---eeecCcCCHHHHHHHHHHhcCCCCCccCCCcchhhhhcCchHHHHHhcCcccEEEEEECCHHHHHh
Confidence 34444455443 6899999999998887666521 11 135789999999999999
Q ss_pred HHHHHHHHhccHHHHhhcCCeeEEEEeeccCCCchhhhhH--HHHHHHHHHHHHHHHHHhCCeEEEe
Q 002903 469 APAALARLFSVDWYRNRINGKQEVMIGYSDSGKDAGRFSA--AWQLYKAQEELIKVAKQYGIKLTMF 533 (868)
Q Consensus 469 a~~il~~Ll~~p~yr~~l~~~QeVMlGYSDS~KDgG~laa--~W~Ly~Aq~~L~~v~~~~gV~l~~F 533 (868)
+++|+. +.+.--+|+|-.|=+.+-|.... .=++..++.+++..|+++|+.+..|
T Consensus 161 ~~eIa~-----------~~~vd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~a~G~~~~v~ 216 (256)
T 1dxe_A 161 VDAIAA-----------TEGVDGIFVGPSDLAAALGHLGNASHPDVQKAIQHIFNRASAHGKPSGIL 216 (256)
T ss_dssp HHHHHT-----------STTCCEEEECHHHHHHHTTCTTCTTSHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHhC-----------CCCCCEEEEChHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCceEEe
Confidence 999974 13566799999888777775431 2358899999999999999998664
No 7
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum}
Probab=91.92 E-value=0.23 Score=56.64 Aligned_cols=104 Identities=19% Similarity=0.156 Sum_probs=83.6
Q ss_pred hHHHhhcCCChhhHHHHHHHHHHcCCCCCCccccccCChHHHhcHHHHHHHHhccHHHHhhcCCeeEEEEeeccCCCchh
Q 002903 425 GAYIISMATAPSDVLAVELLQRECHVKQPLRVVPLFEKLADLEAAPAALARLFSVDWYRNRINGKQEVMIGYSDSGKDAG 504 (868)
Q Consensus 425 g~yIISmt~s~sDvL~V~~L~ke~Gl~~~l~VvPLFETi~DL~~a~~il~~Ll~~p~yr~~l~~~QeVMlGYSDS~KDgG 504 (868)
.-..+|+.++++||.++--+.++.|. .+.|+.-.||.+.++|.++|++. ---||+|-.|=+-+-|
T Consensus 198 D~Ia~SfVr~a~Dv~~~r~~l~~~g~--~~~iiaKIE~~eav~nldeIl~~-------------sDgImVaRGDLgvei~ 262 (461)
T 3qtg_A 198 DYVAISLAKSCKDVDSVRSLLTELGF--QSQVAVKIETKGAVNNLEELVQC-------------SDYVVVARGDLGLHYG 262 (461)
T ss_dssp CEEEECSCCSHHHHHHHHHHHHHTTC--CCEEEEEECSHHHHHTHHHHHHT-------------CSEEEEEHHHHTTTSC
T ss_pred CEEEecCCCCHHHHHHHHHHHHhcCC--CceEEEEECCHHHHHhHHHHHHh-------------cccEEEccccccccCC
Confidence 34568999999999999999988885 58999999999999999999985 1369999999888887
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhCCeEEEecCCCCCCCCCCCch
Q 002903 505 RFSAAWQLYKAQEELIKVAKQYGIKLTMFHGRGGTVGRGGGPT 547 (868)
Q Consensus 505 ~laa~W~Ly~Aq~~L~~v~~~~gV~l~~FHGRGGsvgRGGGPt 547 (868)
. ..+..+|+++...|+++|..+..==--=.|+-.-.-||
T Consensus 263 ~----e~v~~~Qk~ii~~~~~~gkpvi~ATQMLeSMi~~p~PT 301 (461)
T 3qtg_A 263 L----DALPIVQRRIVHTSLKYGKPIAVATQLLDSMQSSPIPT 301 (461)
T ss_dssp T----TTHHHHHHHHHHHHHHTTCCEEEESSSSGGGGTCSSCC
T ss_pred H----HHHHHHHHHHHHHHHHhCCCEEEeccchHhhccCCCcc
Confidence 4 48999999999999999988776222222333334465
No 8
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ...
Probab=91.76 E-value=0.24 Score=57.55 Aligned_cols=98 Identities=17% Similarity=0.201 Sum_probs=81.1
Q ss_pred HHHHHhCCCCchhHHHhhcCCChhhHHHHHHHHHHcCCCCCCccccccCChHHHhcHHHHHHHHhccHHHHhhcCCeeEE
Q 002903 413 FHVIAELPADNFGAYIISMATAPSDVLAVELLQRECHVKQPLRVVPLFEKLADLEAAPAALARLFSVDWYRNRINGKQEV 492 (868)
Q Consensus 413 f~~i~~~~~~a~g~yIISmt~s~sDvL~V~~L~ke~Gl~~~l~VvPLFETi~DL~~a~~il~~Ll~~p~yr~~l~~~QeV 492 (868)
++...+.+.+.+ .+|+.++++||.++--+.++.| ..+.|++-.||.+.++|.++|++.. =-|
T Consensus 248 l~f~~~~~vD~i---a~SfVr~a~Dv~~~r~~L~~~g--~~i~IIAKIE~~eav~nldeIl~~s-------------DgI 309 (550)
T 3gr4_A 248 LKFGVEQDVDMV---FASFIRKASDVHEVRKVLGEKG--KNIKIISKIENHEGVRRFDEILEAS-------------DGI 309 (550)
T ss_dssp HHHHHHTTCSEE---EETTCCSHHHHHHHHHHHTTTT--TTSEEEEEECSHHHHHTHHHHHHHS-------------SEE
T ss_pred HHHHHHcCCCEE---EecCCCCHHHHHHHHHHHHhcC--CCceEEEEeCCHHHHHHHHHHHHhC-------------CEE
Confidence 344455555544 3799999999999998888777 3789999999999999999999861 269
Q ss_pred EEeeccCCCchhhhhHHHHHHHHHHHHHHHHHHhCCeEEE
Q 002903 493 MIGYSDSGKDAGRFSAAWQLYKAQEELIKVAKQYGIKLTM 532 (868)
Q Consensus 493 MlGYSDS~KDgG~laa~W~Ly~Aq~~L~~v~~~~gV~l~~ 532 (868)
|+|-.|=+-+-|. ..+..+|+++...|+++|..+..
T Consensus 310 mVaRGDLgvei~~----e~vp~~Qk~iI~~c~~agkpVi~ 345 (550)
T 3gr4_A 310 MVARGDLGIEIPA----EKVFLAQKMMIGRCNRAGKPVIC 345 (550)
T ss_dssp EEEHHHHHHHSCG----GGHHHHHHHHHHHHHHHTCCEEE
T ss_pred EEccchhcccCCH----HHHHHHHHHHHHHHHHhCCCEEE
Confidence 9999988777775 46899999999999999987764
No 9
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A
Probab=91.73 E-value=0.12 Score=59.68 Aligned_cols=97 Identities=15% Similarity=0.165 Sum_probs=80.7
Q ss_pred HHHHhCCCCchhHHHhhcCCChhhHHHHHHHHHHcCCCCCCccccccCChHHHhcHHHHHHHHhccHHHHhhcCCeeEEE
Q 002903 414 HVIAELPADNFGAYIISMATAPSDVLAVELLQRECHVKQPLRVVPLFEKLADLEAAPAALARLFSVDWYRNRINGKQEVM 493 (868)
Q Consensus 414 ~~i~~~~~~a~g~yIISmt~s~sDvL~V~~L~ke~Gl~~~l~VvPLFETi~DL~~a~~il~~Ll~~p~yr~~l~~~QeVM 493 (868)
+.+.+.+.+ ..++||.+++.|+.++--+..++| ..+.|++..||.+.++|.++|++.. --||
T Consensus 200 ~~~l~~g~d---~I~lpfV~saeDv~~~~~~l~~~~--~~i~IiakIEt~eav~nldeI~~~~-------------DgIm 261 (500)
T 1a3w_A 200 RFGVKNGVH---MVFASFIRTANDVLTIREVLGEQG--KDVKIIVKIENQQGVNNFDEILKVT-------------DGVM 261 (500)
T ss_dssp HHHHHHTCS---EEEECSCCSHHHHHHHHHHHHHHH--TTSEEEEEECSSHHHHSHHHHHHHS-------------SEEE
T ss_pred HHHHHcCCC---EEEECCCCCHHHHHHHHHHHHhcC--CCcEEEEEECChHHHHhHHHHHHhC-------------CEEE
Confidence 334444444 458899999999999988777776 3688999999999999999999761 2799
Q ss_pred EeeccCCCchhhhhHHHHHHHHHHHHHHHHHHhCCeEEE
Q 002903 494 IGYSDSGKDAGRFSAAWQLYKAQEELIKVAKQYGIKLTM 532 (868)
Q Consensus 494 lGYSDS~KDgG~laa~W~Ly~Aq~~L~~v~~~~gV~l~~ 532 (868)
+|-.|=+.+-|. ..+..+|+++...|+++|+.+..
T Consensus 262 vgrgDLgvelg~----~~v~~aqk~ii~aaraaGkpvi~ 296 (500)
T 1a3w_A 262 VARGDLGIEIPA----PEVLAVQKKLIAKSNLAGKPVIC 296 (500)
T ss_dssp ECHHHHHHHTTG----GGHHHHHHHHHHHHHHHTCCEEE
T ss_pred ECchHhhhhcCc----HHHHHHHHHHHHHHHhcCCCEEE
Confidence 999999999883 56889999999999999999874
No 10
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A*
Probab=90.50 E-value=0.26 Score=56.77 Aligned_cols=97 Identities=15% Similarity=0.124 Sum_probs=79.9
Q ss_pred HHHHhCCCCchhHHHhhcCCChhhHHHHHHHHHHcCCCCCCccccccCChHHHhcHHHHHHHHhccHHHHhhcCCeeEEE
Q 002903 414 HVIAELPADNFGAYIISMATAPSDVLAVELLQRECHVKQPLRVVPLFEKLADLEAAPAALARLFSVDWYRNRINGKQEVM 493 (868)
Q Consensus 414 ~~i~~~~~~a~g~yIISmt~s~sDvL~V~~L~ke~Gl~~~l~VvPLFETi~DL~~a~~il~~Ll~~p~yr~~l~~~QeVM 493 (868)
+...+.+.+ -..+|+.++++||.++--+.++.| ..+.|+.-.||.+.++|.++|++.. --||
T Consensus 199 ~~~~~~~vD---~i~~sfVr~a~dv~~~r~~l~~~~--~~i~IiaKIE~~eav~nldeIl~~s-------------DgIm 260 (499)
T 3hqn_D 199 QFGVEQGVD---MIFASFIRSAEQVGDVRKALGPKG--RDIMIICKIENHQGVQNIDSIIEES-------------DGIM 260 (499)
T ss_dssp HHHHHTTCS---EEEETTCCSHHHHHHHHHHHCGGG--TTSEEEEEECSHHHHHTHHHHHHHS-------------SEEE
T ss_pred HHHHHcCCC---EEEecCCCCHHHHHHHHHHHHhcC--CCCeEEEEECCHHHHHhHHHHHHhC-------------CcEE
Confidence 444455444 346799999999999988877766 4789999999999999999999861 3699
Q ss_pred EeeccCCCchhhhhHHHHHHHHHHHHHHHHHHhCCeEEE
Q 002903 494 IGYSDSGKDAGRFSAAWQLYKAQEELIKVAKQYGIKLTM 532 (868)
Q Consensus 494 lGYSDS~KDgG~laa~W~Ly~Aq~~L~~v~~~~gV~l~~ 532 (868)
+|-.|=+-+-| ...+..+|+++...|+++|..+..
T Consensus 261 VaRGDLgvEi~----~e~vp~~Qk~iI~~c~~agkpVi~ 295 (499)
T 3hqn_D 261 VARGDLGVEIP----AEKVVVAQKILISKCNVAGKPVIC 295 (499)
T ss_dssp EEHHHHHHHSC----HHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred EccccccCcCC----HHHHHHHHHHHHHHHHHcCCCeEE
Confidence 99988777776 358999999999999999988776
No 11
>3qqw_A Putative citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 2.44A {Ralstonia eutropha}
Probab=90.31 E-value=0.26 Score=53.94 Aligned_cols=100 Identities=17% Similarity=0.166 Sum_probs=76.5
Q ss_pred chhHHHhhcCCChhhHHHHHHHHH----HcCCCCCCccccccCChHHHhcHHHHHHHHhccHHHHhhcCCeeEEEEeecc
Q 002903 423 NFGAYIISMATAPSDVLAVELLQR----ECHVKQPLRVVPLFEKLADLEAAPAALARLFSVDWYRNRINGKQEVMIGYSD 498 (868)
Q Consensus 423 a~g~yIISmt~s~sDvL~V~~L~k----e~Gl~~~l~VvPLFETi~DL~~a~~il~~Ll~~p~yr~~l~~~QeVMlGYSD 498 (868)
.+...++.|++++.||-.+.-+.+ ..|+..++.|+|+.||...+.|+.+|.. . .+..-+++|-.|
T Consensus 111 g~dgI~LPKvesa~dv~~~~~~l~~~e~~~G~~~~i~l~~~IET~~gv~~~~eIaa----~-------~rv~~L~~G~~D 179 (332)
T 3qqw_A 111 RLAYITVPKATNSGQVAEVIRYIGDVAKRAGLDKPVPVHVLIETHGALRDVFQIAE----L-------PNIEVLDFGLMD 179 (332)
T ss_dssp CCCCEEECCCCSHHHHHHHHHHHHHHHHHTTCSSCCCEEEEECSHHHHHTHHHHTT----S-------TTEEEEEECHHH
T ss_pred CCCEEEeCCCCCHHHHHHHHHHHHHHHHhcCCCCCeEEEEEecCHHHHHHHHHHhc----C-------cCCCEEEEcHHH
Confidence 344578999999999988755554 4577667999999999999999999873 1 357889999888
Q ss_pred CCCchhhh--------hHHH---HHHHHHHHHHHHHHHhCCeEEEecC
Q 002903 499 SGKDAGRF--------SAAW---QLYKAQEELIKVAKQYGIKLTMFHG 535 (868)
Q Consensus 499 S~KDgG~l--------aa~W---~Ly~Aq~~L~~v~~~~gV~l~~FHG 535 (868)
=.+|-|.- ...| .+..|..+++..|+.+|+.. ++|
T Consensus 180 L~~~lg~~~~~~~~~~~g~~~~p~l~~ar~~vv~AAraaGi~~--id~ 225 (332)
T 3qqw_A 180 FVSGHHGAIPAAAMRSPGQFEHALLVRAKADMVAAALANGIVP--AHN 225 (332)
T ss_dssp HHHTTTTCSCGGGGSTTGGGTSHHHHHHHHHHHHHHHHTTCEE--EEC
T ss_pred HHHHhCCCccccccCCCCcccCHHHHHHHHHHHHHHHHhCCCc--ccC
Confidence 77665431 1223 26788889999999999985 665
No 12
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7}
Probab=90.19 E-value=0.31 Score=56.29 Aligned_cols=87 Identities=18% Similarity=0.250 Sum_probs=76.0
Q ss_pred HHhhcCCChhhHHHHHHHHHHcCCCCCCccccccCChHHHhcHHHHHHHHhccHHHHhhcCCeeEEEEeeccCCCchhhh
Q 002903 427 YIISMATAPSDVLAVELLQRECHVKQPLRVVPLFEKLADLEAAPAALARLFSVDWYRNRINGKQEVMIGYSDSGKDAGRF 506 (868)
Q Consensus 427 yIISmt~s~sDvL~V~~L~ke~Gl~~~l~VvPLFETi~DL~~a~~il~~Ll~~p~yr~~l~~~QeVMlGYSDS~KDgG~l 506 (868)
..+|+.++++||.++--+.++.| ..+.|++-.||.+.++|.++|++.- --||+|--|=+-+-|.
T Consensus 234 Ia~SFVr~a~Dv~~~r~~l~~~g--~~i~IIAKIE~~eav~nldeIl~~s-------------DGIMVARGDLgvEi~~- 297 (520)
T 3khd_A 234 IAASFIQSADDVRLIRNLLGPRG--RHIKIIPKIENIEGIIHFDKILAES-------------DGIMIARGDLGMEISP- 297 (520)
T ss_dssp EEETTCCSHHHHHHHHHHHTTTT--TTSEEEEEECSHHHHHTHHHHHHHS-------------SCEEECHHHHTTTSCG-
T ss_pred EEECCCCCHHHHHHHHHHHHhcC--CCCcEEEEECCHHHHHhHHHHHHhC-------------CcEEEccccccccCCH-
Confidence 35799999999999998888777 4789999999999999999999861 2599999998888776
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCeEEE
Q 002903 507 SAAWQLYKAQEELIKVAKQYGIKLTM 532 (868)
Q Consensus 507 aa~W~Ly~Aq~~L~~v~~~~gV~l~~ 532 (868)
..+..+|+++...|+++|..+..
T Consensus 298 ---e~vp~~Qk~iI~~c~~aGKPVi~ 320 (520)
T 3khd_A 298 ---EKVFLAQKLMISKCNLQGKPIIT 320 (520)
T ss_dssp ---GGHHHHHHHHHHHHHHHTCCEEE
T ss_pred ---HHHHHHHHHHHHHHHHcCCCeEE
Confidence 48999999999999999987763
No 13
>3qll_A Citrate lyase; beta barrel; 2.45A {Yersinia pestis}
Probab=89.85 E-value=0.19 Score=54.65 Aligned_cols=105 Identities=16% Similarity=0.174 Sum_probs=80.2
Q ss_pred HHhCCCCchhHHHhhcCCChhhHHHHHHHHHHcCCCCCCccccccCChHHHhcHHHHHHHHhccHHHHhhcCCeeEEEEe
Q 002903 416 IAELPADNFGAYIISMATAPSDVLAVELLQRECHVKQPLRVVPLFEKLADLEAAPAALARLFSVDWYRNRINGKQEVMIG 495 (868)
Q Consensus 416 i~~~~~~a~g~yIISmt~s~sDvL~V~~L~ke~Gl~~~l~VvPLFETi~DL~~a~~il~~Ll~~p~yr~~l~~~QeVMlG 495 (868)
+...+. .+..+++.|++++.|+-.+.-+.+.++ ..+.|+|+.||...+.|+.+|.. ...+..-+++|
T Consensus 123 ~l~~g~-~~~gIvlPKvesa~~v~~~~~~l~~~~--~~~~l~~~IET~~gv~~~~eIa~----------a~~~v~~l~~G 189 (316)
T 3qll_A 123 LLECGS-LPDYLVLPKTESAAHLQILDRLMMFAG--SDTRLIGIIESVRGLNAVESIAA----------ATPKLAGLIFG 189 (316)
T ss_dssp HHHSCC-CCSEEEETTCCSHHHHHHHHHHTSCC----CCEEEEEECSHHHHHTHHHHHT----------SCTTEEEEEEC
T ss_pred HHhCCC-CCCEEEeCCCCCHHHHHHHHHHHHhcC--CCCEEEEEEcCHHHHHHHHHHHh----------cCCCceEEEEC
Confidence 334442 245679999999999988876665443 36889999999999999999975 12467889999
Q ss_pred eccCCCchhhhhHHHHHHHHHHHHHHHHHHhCCeEEEecC
Q 002903 496 YSDSGKDAGRFSAAWQLYKAQEELIKVAKQYGIKLTMFHG 535 (868)
Q Consensus 496 YSDS~KDgG~laa~W~Ly~Aq~~L~~v~~~~gV~l~~FHG 535 (868)
-.|=..|-|.-...=.+..|..+++..|+.+|+.+ ++|
T Consensus 190 ~~DL~~~lG~~~~~~~l~~ar~~iv~AaraaGi~~--id~ 227 (316)
T 3qll_A 190 AADMAADIGAASTWEPLALARARLVSACAMNGIPA--IDA 227 (316)
T ss_dssp HHHHHHHHTCCSSHHHHHHHHHHHHHHHHHHTCCE--EEC
T ss_pred HHHHHHHhCCCCCcHHHHHHHHHHHHHHHHcCCce--eec
Confidence 99888887765544557778889999999999986 554
No 14
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A
Probab=89.70 E-value=0.3 Score=56.29 Aligned_cols=88 Identities=20% Similarity=0.235 Sum_probs=75.5
Q ss_pred HHHhhcCCChhhHHHHHHHHHHcCCCCCCccccccCChHHHhcHHHHHHHHhccHHHHhhcCCeeEEEEeeccCCCchhh
Q 002903 426 AYIISMATAPSDVLAVELLQRECHVKQPLRVVPLFEKLADLEAAPAALARLFSVDWYRNRINGKQEVMIGYSDSGKDAGR 505 (868)
Q Consensus 426 ~yIISmt~s~sDvL~V~~L~ke~Gl~~~l~VvPLFETi~DL~~a~~il~~Ll~~p~yr~~l~~~QeVMlGYSDS~KDgG~ 505 (868)
-..+|+.++++||.++--+.++.|- .+.|+.-.||.+.++|.++|++.- --||+|-.|=+-+-|
T Consensus 224 ~Ia~SFVr~a~Dv~~~r~~l~~~~~--~~~iiaKIE~~eav~nldeIl~~s-------------DgimVaRGDLgvei~- 287 (511)
T 3gg8_A 224 FIAASFVQSADDVRYIRGLLGPRGR--HIRIIPKIENVEGLVNFDEILAEA-------------DGIMIARGDLGMEIP- 287 (511)
T ss_dssp EEEETTCCSHHHHHHHHHHHTGGGT--TCEEEEEECSHHHHHTHHHHHHHC-------------SCEEEEHHHHHHHSC-
T ss_pred EEEEcCCCCHHHHHHHHHHHHhcCC--CCeEEEEECCHHHHHhHHHHHHhC-------------CeEEEecchhcCcCC-
Confidence 3467999999999999988888874 788999999999999999999861 359999888666655
Q ss_pred hhHHHHHHHHHHHHHHHHHHhCCeEEE
Q 002903 506 FSAAWQLYKAQEELIKVAKQYGIKLTM 532 (868)
Q Consensus 506 laa~W~Ly~Aq~~L~~v~~~~gV~l~~ 532 (868)
-..+..+|+++...|+++|..+..
T Consensus 288 ---~e~v~~~qk~ii~~~~~~gkpvi~ 311 (511)
T 3gg8_A 288 ---PEKVFLAQKMMIAKCNVVGKPVIT 311 (511)
T ss_dssp ---HHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred ---HHHHHHHHHHHHHHHHHcCCCeEE
Confidence 369999999999999999987765
No 15
>3r4i_A Citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.24A {Burkholderia xenovorans}
Probab=89.69 E-value=0.51 Score=51.80 Aligned_cols=105 Identities=17% Similarity=0.154 Sum_probs=78.8
Q ss_pred chhHHHhhcCCChhhHHHHHHHHH----HcCCCCCCccccccCChHHHhcHHHHHHHHhccHHHHhhcCCeeEEEEeecc
Q 002903 423 NFGAYIISMATAPSDVLAVELLQR----ECHVKQPLRVVPLFEKLADLEAAPAALARLFSVDWYRNRINGKQEVMIGYSD 498 (868)
Q Consensus 423 a~g~yIISmt~s~sDvL~V~~L~k----e~Gl~~~l~VvPLFETi~DL~~a~~il~~Ll~~p~yr~~l~~~QeVMlGYSD 498 (868)
.+...++.|++++.||-.+.-+.+ +.|+..++.|+|+.||...+.|+.+|.. . .+..-+++|-.|
T Consensus 110 g~~~I~LPKves~~dv~~~~~~l~~~e~~~G~~~~~~l~~~IET~~gv~~~~eIAa----~-------~rv~~L~~G~~D 178 (339)
T 3r4i_A 110 APAYITLPKIRHVHDAAEMVAFIEATRRELGIAQPVPVQLLVETHGALTRVFDLAA----L-------PGVEALSFGLMD 178 (339)
T ss_dssp CCSCEEECC-CCHHHHHHHHHHHHHHHHHTTCSSCCCEEEEECSHHHHHTHHHHHT----C-------TTEEEEEECHHH
T ss_pred CCCEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeccHHHHHhHHHHHc----C-------cCCCEEEECHHH
Confidence 345678999999999988755544 4577667899999999999999999873 1 367889999888
Q ss_pred CCCchhh--------hhHHHH---HHHHHHHHHHHHHHhCCeEEEecCCCCCC
Q 002903 499 SGKDAGR--------FSAAWQ---LYKAQEELIKVAKQYGIKLTMFHGRGGTV 540 (868)
Q Consensus 499 S~KDgG~--------laa~W~---Ly~Aq~~L~~v~~~~gV~l~~FHGRGGsv 540 (868)
=..+-|. ....|. +..|...++..|+.+|+.. ++|==+-+
T Consensus 179 L~~~lg~~~~~~~~~~~~~~~~p~~~~a~~~iv~AAraaGi~~--id~v~~d~ 229 (339)
T 3r4i_A 179 FVSAHDGAIPDTAMRSPGQFDHPLVRRAKLEISAACHAYGKVP--SHNVSTEV 229 (339)
T ss_dssp HHHTTTTSSCGGGGSTTHHHHSHHHHHHHHHHHHHHHHTTCEE--EECCCCCS
T ss_pred HHHHhCCCcCccccCCCccccCHHHHHHHHHHHHHHHHcCCCC--ccCCCcCC
Confidence 7776553 123443 6788899999999999975 56544444
No 16
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=89.27 E-value=0.18 Score=53.29 Aligned_cols=97 Identities=19% Similarity=0.308 Sum_probs=76.5
Q ss_pred HHHhhcCCChhhHHHHHHHHHHc---------------CC----------CCCCccccccCChHHHhcHHHHHHHHhccH
Q 002903 426 AYIISMATAPSDVLAVELLQREC---------------HV----------KQPLRVVPLFEKLADLEAAPAALARLFSVD 480 (868)
Q Consensus 426 ~yIISmt~s~sDvL~V~~L~ke~---------------Gl----------~~~l~VvPLFETi~DL~~a~~il~~Ll~~p 480 (868)
..+|+|++++.|+-++.-.+|.. |. ...+.|+++.||...+.|+++|.. .
T Consensus 91 gI~lP~v~saed~~~~~~~~~~~p~G~Rg~~~~r~~~~g~~~~~~y~~~~~~~~~v~~mIEt~~av~~~~eIaa----~- 165 (261)
T 3qz6_A 91 GFMIPGVQSAETMRETVRLAKYPPLGERGVGGSIVTDFKPVNWAEWVQERNDEIFIMAQIEHVKAVEDIDSILA----V- 165 (261)
T ss_dssp EEEETTCCSHHHHHHHHHHHSCTTTCCCCCCCGGGGTTCCCCHHHHHHHHHTTCEEEEEECCHHHHHTHHHHHT----S-
T ss_pred EEEECCcCCHHHHHHHHHHhccCCCCCcCcccchhhhccccchhhHHhcCCCCeEEEEEECCHHHHHHHHHHhC----C-
Confidence 46899999999999987776531 11 136789999999999999999973 1
Q ss_pred HHHhhcCCeeEEEEeeccCCCchhhhhH--HHHHHHHHHHHHHHHHHhCCeEEEe
Q 002903 481 WYRNRINGKQEVMIGYSDSGKDAGRFSA--AWQLYKAQEELIKVAKQYGIKLTMF 533 (868)
Q Consensus 481 ~yr~~l~~~QeVMlGYSDS~KDgG~laa--~W~Ly~Aq~~L~~v~~~~gV~l~~F 533 (868)
.+.--+|+|-.|=+.+-|.... .=++..++.+++..|+++|+.+-++
T Consensus 166 ------~~vd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~aaG~~~g~~ 214 (261)
T 3qz6_A 166 ------QGVDAVIFGPRDLSNDLGIIGQTEHPKVYECYEKVYRAADRQGVVKGFF 214 (261)
T ss_dssp ------TTCCEEEECHHHHHHHTTCTTCTTCHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred ------CCCCEEEECHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEE
Confidence 2567799999988777775421 2368899999999999999999776
No 17
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=88.37 E-value=0.52 Score=50.55 Aligned_cols=104 Identities=17% Similarity=0.235 Sum_probs=77.6
Q ss_pred HHhCCCCchhHHHhhcCCChhhHHHHHHHHHHc--C---C--------------------CCCCccccccCChHHHhcHH
Q 002903 416 IAELPADNFGAYIISMATAPSDVLAVELLQREC--H---V--------------------KQPLRVVPLFEKLADLEAAP 470 (868)
Q Consensus 416 i~~~~~~a~g~yIISmt~s~sDvL~V~~L~ke~--G---l--------------------~~~l~VvPLFETi~DL~~a~ 470 (868)
+-+.+.+ ..+++|++++.|+-++.-.+|.- | + ...+.|+++.||.+.+.|++
T Consensus 107 ~ld~ga~---~ImlP~V~saeea~~~~~~~~~~p~G~Rg~g~~~~ra~~~g~~~~y~~~~~~~~~vi~mIEt~~av~n~d 183 (287)
T 2v5j_A 107 LLDVGTQ---TLLVPMVQNADEAREAVRATRYPPAGIRGVGSALARASRWNRIPDYLQKANDQMCVLVQIETREAMKNLP 183 (287)
T ss_dssp HHHTTCC---EEEESCCCSHHHHHHHHHHTSCTTTSCCCGGGTTTGGGTTTTSTTHHHHHHHHCEEEEEECSHHHHHTHH
T ss_pred HHhCCCC---EEEeCCCCCHHHHHHHHHHhccCccCccccccchhhhhhccchhhhHhhcCCCcEEEEEECcHHHHHHHH
Confidence 3344444 46899999999988876655421 1 1 01377999999999999999
Q ss_pred HHHHHHhccHHHHhhcCCeeEEEEeeccCCCchhhhh--HHHHHHHHHHHHHHHHHHhCCeEEEe
Q 002903 471 AALARLFSVDWYRNRINGKQEVMIGYSDSGKDAGRFS--AAWQLYKAQEELIKVAKQYGIKLTMF 533 (868)
Q Consensus 471 ~il~~Ll~~p~yr~~l~~~QeVMlGYSDS~KDgG~la--a~W~Ly~Aq~~L~~v~~~~gV~l~~F 533 (868)
+|+. +.+.--||+|-.|=+.+-|... ..=++..|+++++..|+++|+.+.+|
T Consensus 184 eIaa-----------~~~vD~l~iG~~DLs~~lg~~~~~~~p~v~~a~~~iv~aaraaG~~~gv~ 237 (287)
T 2v5j_A 184 QILD-----------VEGVDGVFIGPADLSADMGYAGNPQHPEVQAAIEQAIVQIRESGKAPGIL 237 (287)
T ss_dssp HHHT-----------STTEEEEEECHHHHHHHTTSTTCCCSHHHHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHhC-----------cCCCCEEEECHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHcCCeeEEe
Confidence 9974 1356789999998887777532 12357899999999999999998654
No 18
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=87.76 E-value=0.58 Score=55.07 Aligned_cols=95 Identities=20% Similarity=0.268 Sum_probs=79.1
Q ss_pred HHhCCCCchhHHHhhcCCChhhHHHHHHHHHHcCCCCCCccccccCChHHHhcHHHHHHHHhccHHHHhhcCCeeEEEEe
Q 002903 416 IAELPADNFGAYIISMATAPSDVLAVELLQRECHVKQPLRVVPLFEKLADLEAAPAALARLFSVDWYRNRINGKQEVMIG 495 (868)
Q Consensus 416 i~~~~~~a~g~yIISmt~s~sDvL~V~~L~ke~Gl~~~l~VvPLFETi~DL~~a~~il~~Ll~~p~yr~~l~~~QeVMlG 495 (868)
..+.+-+.+ .+|+.++++||.++--+.++.|- .+.|+.-.||.+.++|.++|++. .--||+|
T Consensus 202 ~~~~~vD~I---a~SFVr~a~Dv~~~r~~l~~~~~--~i~IiaKIE~~eav~nldeIl~~-------------sDGImVA 263 (606)
T 3t05_A 202 GIKENVDFI---AASFVRRPSDVLEIREILEEQKA--NISVFPKIENQEGIDNIEEILEV-------------SDGLMVA 263 (606)
T ss_dssp HHHTTCSEE---EETTCCSHHHHHHHHHHHHHTTC--CCEEEECCCSHHHHHTHHHHHHH-------------CSCEEEE
T ss_pred HHHcCCCEE---EECCCCCHHHHHHHHHHHHhcCC--CCeEEEEeCCHHHHHhHHHHHHh-------------CCEEEEc
Confidence 334444433 57999999999999999888885 78999999999999999999996 1259999
Q ss_pred eccCCCchhhhhHHHHHHHHHHHHHHHHHHhCCeEEE
Q 002903 496 YSDSGKDAGRFSAAWQLYKAQEELIKVAKQYGIKLTM 532 (868)
Q Consensus 496 YSDS~KDgG~laa~W~Ly~Aq~~L~~v~~~~gV~l~~ 532 (868)
-.|=+-+-|. ..+..+|+++...|+++|..+..
T Consensus 264 RGDLgvei~~----e~vp~~Qk~ii~~~~~~gkpvi~ 296 (606)
T 3t05_A 264 RGDMGVEIPP----EKVPMVQKDLIRQCNKLGKPVIT 296 (606)
T ss_dssp HHHHHHHSCG----GGHHHHHHHHHHHHHHHTCCEEE
T ss_pred cccccCcCCH----HHHHHHHHHHHHHHHHcCCCeEE
Confidence 9887666664 58999999999999999988775
No 19
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=87.51 E-value=0.57 Score=55.07 Aligned_cols=89 Identities=18% Similarity=0.192 Sum_probs=77.8
Q ss_pred HHHhhcCCChhhHHHHHHHHHHcCCCCCCccccccCChHHHhcHHHHHHHHhccHHHHhhcCCeeEEEEeeccCCCchhh
Q 002903 426 AYIISMATAPSDVLAVELLQRECHVKQPLRVVPLFEKLADLEAAPAALARLFSVDWYRNRINGKQEVMIGYSDSGKDAGR 505 (868)
Q Consensus 426 ~yIISmt~s~sDvL~V~~L~ke~Gl~~~l~VvPLFETi~DL~~a~~il~~Ll~~p~yr~~l~~~QeVMlGYSDS~KDgG~ 505 (868)
-.++||.++++|+.++.-++++.|. ..+.|+.-.||.+.++|.++|++.- =-||+|-.|=+-.-|+
T Consensus 189 ~v~~sfV~~a~dv~~~~~~l~~~~~-~~~~iiakIE~~eav~nldeIl~~~-------------DgImVargDLgvei~~ 254 (587)
T 2e28_A 189 FIAASFVRRASDVLEIRELLEAHDA-LHIQIIAKIENEEGVANIDEILEAA-------------DGLMVARGDLGVEIPA 254 (587)
T ss_dssp EEEESSCCSHHHHHHHHHHHHHTTC-TTSEEEEEECSHHHHHTHHHHHHHS-------------SEEEEEHHHHHHHSCG
T ss_pred EEEECCCCCHHHHHHHHHHHHHcCC-CCceEEEEECCHHHHHhHHHHHHhC-------------CEEEEcCchhhhhcCH
Confidence 3578999999999999988888874 3688999999999999999999871 3599999998877775
Q ss_pred hhHHHHHHHHHHHHHHHHHHhCCeEEE
Q 002903 506 FSAAWQLYKAQEELIKVAKQYGIKLTM 532 (868)
Q Consensus 506 laa~W~Ly~Aq~~L~~v~~~~gV~l~~ 532 (868)
..+..+|+++.+.|+++|..+..
T Consensus 255 ----~~v~~~qk~ii~~~~~~gkpvi~ 277 (587)
T 2e28_A 255 ----EEVPLIQKLLIKKSNMLGKPVIT 277 (587)
T ss_dssp ----GGHHHHHHHHHHHHHHHTCCEEE
T ss_pred ----HHHHHHHHHHHHHHHHcCCCeEE
Confidence 88999999999999999988765
No 20
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5
Probab=86.49 E-value=0.2 Score=54.97 Aligned_cols=92 Identities=15% Similarity=0.162 Sum_probs=73.0
Q ss_pred HHhhcCCChhhHHHHHHHHHHc--CCC----------------------------CCCccccccCChHHHhcHHHHHHHH
Q 002903 427 YIISMATAPSDVLAVELLQREC--HVK----------------------------QPLRVVPLFEKLADLEAAPAALARL 476 (868)
Q Consensus 427 yIISmt~s~sDvL~V~~L~ke~--Gl~----------------------------~~l~VvPLFETi~DL~~a~~il~~L 476 (868)
.+|+|++++.|+-++.-+++.. |.. ..+.|+++.||...+.|+++|+.
T Consensus 121 ImlP~V~saee~~~~~~~~~~~p~g~Rg~~~~a~~~G~~~~~~~~~~~~y~~~a~~~i~vi~mIEt~~av~nldeIaa-- 198 (339)
T 1izc_A 121 IVIPHVETVEEVREFVKEMYYGPIGRRSFSPWTFSPGIADASLFPNDPYNVATSNNHVCIIPQIESVKGVENVDAIAA-- 198 (339)
T ss_dssp EEETTCCCHHHHHHHHHHHSCTTTCCCCCCSTTCBTTTBCCCSSTTCTTCHHHHHHHCEEEEEECSHHHHHTHHHHHT--
T ss_pred EEeCCCCCHHHHHHHHHHhccCccCcccccchhhcccccccccccchhhhhhhcCcCceEEEEEChHHHHHHHHHHhc--
Confidence 6899999999999998887752 211 13679999999999999999973
Q ss_pred hccHHHHhhcCCeeEEEEeeccCCCc--------hhhhhHHHHHHHHHHHHHHHHHHhCCeE
Q 002903 477 FSVDWYRNRINGKQEVMIGYSDSGKD--------AGRFSAAWQLYKAQEELIKVAKQYGIKL 530 (868)
Q Consensus 477 l~~p~yr~~l~~~QeVMlGYSDS~KD--------gG~laa~W~Ly~Aq~~L~~v~~~~gV~l 530 (868)
+.+.--||||-.|=+.+ -|+-. .-++..++.+++..|+++|+.+
T Consensus 199 ---------~~~vD~l~iG~~DLs~~~~~~~~~~lG~~~-~p~v~~a~~~iv~aaraaGk~~ 250 (339)
T 1izc_A 199 ---------MPEIHGLMFGPGDYMIDAGLDLNGALSGVP-HPTFVEAMTKFSTAAQRNGVPI 250 (339)
T ss_dssp ---------CTTCCCEEECHHHHHHHTTCCTTCCTTSCC-CHHHHHHHHHHHHHHHHTTCCE
T ss_pred ---------CCCCCEEEECHHHHHhhhhcccchhhCCCC-CHHHHHHHHHHHHHHHHhCCce
Confidence 12456699998876666 45433 5778999999999999999987
No 21
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=80.92 E-value=0.71 Score=48.81 Aligned_cols=105 Identities=17% Similarity=0.173 Sum_probs=78.0
Q ss_pred HHHhCCCCchhHHHhhcCCChhhHHHHHHHHHHc-----------------CC--------CCCCccccccCChHHHhcH
Q 002903 415 VIAELPADNFGAYIISMATAPSDVLAVELLQREC-----------------HV--------KQPLRVVPLFEKLADLEAA 469 (868)
Q Consensus 415 ~i~~~~~~a~g~yIISmt~s~sDvL~V~~L~ke~-----------------Gl--------~~~l~VvPLFETi~DL~~a 469 (868)
.+-+.+.+ ..+|+|++++.|+-++.-.+|.- |. ...+.|+++.||.+.+.|+
T Consensus 85 ~~l~~g~~---~I~~P~V~s~ee~~~~~~~~~~~p~G~Rg~~~~~~~~~~~g~~~~y~~~~~~~~~v~~~IEt~~av~~~ 161 (267)
T 2vws_A 85 QVLDIGAQ---TLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNL 161 (267)
T ss_dssp HHHHTTCC---EEEECCCCSHHHHHHHHHHTSCTTTSCCCSCGGGSGGGGGGTSTTHHHHHHHHCEEEEECCSHHHHHTH
T ss_pred HHHHhCCC---EEEeCCCCCHHHHHHHHHHHcCCCCCccccccchhhhhhcCcchhhhhhcccccEEEEEECCHHHHHHH
Confidence 33344444 46899999999988876655421 10 0136799999999999999
Q ss_pred HHHHHHHhccHHHHhhcCCeeEEEEeeccCCCchhhhhH--HHHHHHHHHHHHHHHHHhCCeEEEe
Q 002903 470 PAALARLFSVDWYRNRINGKQEVMIGYSDSGKDAGRFSA--AWQLYKAQEELIKVAKQYGIKLTMF 533 (868)
Q Consensus 470 ~~il~~Ll~~p~yr~~l~~~QeVMlGYSDS~KDgG~laa--~W~Ly~Aq~~L~~v~~~~gV~l~~F 533 (868)
++|... .+.--+|+|-.|=+.+-|.... .=++..++.+++..|+++|+.+.+|
T Consensus 162 ~eIa~~-----------~gvd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~aaG~~~~v~ 216 (267)
T 2vws_A 162 DEILDV-----------EGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETSIRRIRAAGKAAGFL 216 (267)
T ss_dssp HHHHTS-----------TTCCEEEECHHHHHHHTTCSSSCCTHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHhCC-----------CCCCEEEEChHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCeEEEe
Confidence 999741 3567799999988888775321 2358899999999999999998775
No 22
>1u5h_A CITE; TIM barrel, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC, lyase; 1.65A {Mycobacterium tuberculosis} SCOP: c.1.12.5 PDB: 1u5v_A* 1z6k_A
Probab=79.52 E-value=0.92 Score=48.13 Aligned_cols=86 Identities=17% Similarity=0.207 Sum_probs=67.7
Q ss_pred hhHHHhhcCCChhhHHHHHHHHHHcCCCCCCccccccCChHHHhcHHHHHHHHhccHHHHhhcCCeeEEEEeeccCCCch
Q 002903 424 FGAYIISMATAPSDVLAVELLQRECHVKQPLRVVPLFEKLADLEAAPAALARLFSVDWYRNRINGKQEVMIGYSDSGKDA 503 (868)
Q Consensus 424 ~g~yIISmt~s~sDvL~V~~L~ke~Gl~~~l~VvPLFETi~DL~~a~~il~~Ll~~p~yr~~l~~~QeVMlGYSDS~KDg 503 (868)
+..+++.|++++.|+-.+- .+.|+|+.||...+.|+.+|.. ..+..-+++|-.|=..+-
T Consensus 85 ~~gi~lPKv~s~~~v~~~~----------~~~i~~~IET~~~v~~~~eIaa-----------~~~v~~l~~G~~Dl~~~l 143 (273)
T 1u5h_A 85 YTTVMLPKAESAAQVIELA----------PRDVIALVETARGAVCAAEIAA-----------ADPTVGMMWGAEDLIATL 143 (273)
T ss_dssp CCEEEETTCCCHHHHHTTT----------TSEEEEEECSHHHHHTHHHHHH-----------STTEEEEEECHHHHHHHH
T ss_pred CCEEEeCCCCCHHHHHHHh----------hCCEEEEEeCHHHHHhHHHHhc-----------CCCCcEEEecHHHHHHHh
Confidence 4457999999999987642 6889999999999999988862 246788999988877776
Q ss_pred hhhhH-------HHHHHHHHHHHHHHHHHhCCeE
Q 002903 504 GRFSA-------AWQLYKAQEELIKVAKQYGIKL 530 (868)
Q Consensus 504 G~laa-------~W~Ly~Aq~~L~~v~~~~gV~l 530 (868)
|.-.. .=.+..|..+++..|+.+|+..
T Consensus 144 G~~~~~~~~~~~~~~~~~a~~~iv~aaraaG~~a 177 (273)
T 1u5h_A 144 GGSSSRRADGAYRDVARHVRSTILLAASAFGRLA 177 (273)
T ss_dssp TCSCSBCTTSCBCHHHHHHHHHHHHHHHHTTCEE
T ss_pred CCCCCCCccccccHHHHHHHHHHHHHHHHcCCCc
Confidence 64321 1147788889999999999965
No 23
>3oyz_A Malate synthase; TIM barrel, transferase; HET: ACO; 1.95A {Haloferax volcanii} PDB: 3oyx_A* 3pug_A
Probab=71.26 E-value=2.7 Score=47.52 Aligned_cols=124 Identities=12% Similarity=0.102 Sum_probs=83.4
Q ss_pred HHHHH-HHHHHHHHHh---CCCCchhHHHhhcCCChhhHHHHHHHH----HHcCCCC-CCccccccCChHH---HhcHHH
Q 002903 404 EEIAD-VLETFHVIAE---LPADNFGAYIISMATAPSDVLAVELLQ----RECHVKQ-PLRVVPLFEKLAD---LEAAPA 471 (868)
Q Consensus 404 ~~~~e-~l~~f~~i~~---~~~~a~g~yIISmt~s~sDvL~V~~L~----ke~Gl~~-~l~VvPLFETi~D---L~~a~~ 471 (868)
..+.. ..+-+..+.. -....+..+++.+++++.||-.+.-+. +..|+.. ++.|+|+.||... |.|+.+
T Consensus 92 ~~T~~~~~~DL~al~~~~~~a~~~~dgIvLPKvesa~dV~~l~~~L~~~E~~~Gl~~G~i~lialIETa~g~~~L~na~e 171 (433)
T 3oyz_A 92 PETRYQGFQHMLDITDPERGAVEHIHGFVIPEVGGIDDWKKADEFFTIVEHEHGLDEGSLAMSVIIESGEAELAMGDLRD 171 (433)
T ss_dssp HHHHHHHHHHHHHHTCGGGSCGGGCCEEEECSCCSHHHHHHHHHHHHHHHHHTTCCTTCSEEEEEECSHHHHHHGGGHHH
T ss_pred CCChhccHHHHHHHhccccccccCCCEEEeCCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEEEeChhHHHHHHHHHH
Confidence 34444 4444455543 111345567999999999998775443 4567754 7999999999999 999999
Q ss_pred HHHHHhccHHHHhhcCCeeEEEEeeccCCCchhhhhHH---HHHHHHHHHHHHHHHHhCCeEEEecC
Q 002903 472 ALARLFSVDWYRNRINGKQEVMIGYSDSGKDAGRFSAA---WQLYKAQEELIKVAKQYGIKLTMFHG 535 (868)
Q Consensus 472 il~~Ll~~p~yr~~l~~~QeVMlGYSDS~KDgG~laa~---W~Ly~Aq~~L~~v~~~~gV~l~~FHG 535 (868)
|+... ++...+..-+++|-.|=+++-|.-... =.+..|..+++..|+.+|+.. ++|
T Consensus 172 IAaas------r~~~pRV~gL~~G~~DLsasLG~~~~~~~~~el~~ARs~IVlAARAaGi~a--IDg 230 (433)
T 3oyz_A 172 EMGKP------TNNLERLFLLVDGEVDYTKDMRAMTPTGELPAWPELRHNTSRGASAAGCVA--VDG 230 (433)
T ss_dssp HHHCT------TCCGGGEEEEEECHHHHHHHHTCCCTTCCCCCCHHHHHHHHHHHHHHTCEE--EEC
T ss_pred HHhhh------ccCCCCeEEEEECHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHhCCCc--ccc
Confidence 97621 000125677889988877777654332 135567778899999999864 554
No 24
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A*
Probab=57.21 E-value=17 Score=42.07 Aligned_cols=91 Identities=14% Similarity=0.203 Sum_probs=74.6
Q ss_pred HHHhhcCCChhhHHHHHHHHHHcCC-----CCCCccccccCChHHHhcHHHHHHHHhccHHHHhhcCCeeEEEEeeccCC
Q 002903 426 AYIISMATAPSDVLAVELLQRECHV-----KQPLRVVPLFEKLADLEAAPAALARLFSVDWYRNRINGKQEVMIGYSDSG 500 (868)
Q Consensus 426 ~yIISmt~s~sDvL~V~~L~ke~Gl-----~~~l~VvPLFETi~DL~~a~~il~~Ll~~p~yr~~l~~~QeVMlGYSDS~ 500 (868)
-.-+|+.++++||.++--+.++.|- ...+.|+.=+|+.+.++|-++|++. -=-||+.--|=+
T Consensus 232 ~ialSFVr~~~Dv~~~r~~l~~~g~~~~~~~~~i~IiaKIE~~~av~NldeIi~~-------------sDgIMVARGDLg 298 (526)
T 4drs_A 232 FIALSFVQNGADVQLCRQIISENTQYSNGIPSSIKIISKIENLEGVINFDSICSE-------------SDGIMVARGDLG 298 (526)
T ss_dssp EEEETTCCSHHHHHHHHHHHHTCCTTTTTCCCCCEEEEEECSHHHHHTHHHHHHH-------------SSEEEEECTTHH
T ss_pred eeeecccCchhhHHHHHHHHHhhCcccccccccceeeeehhccHHHHHHHHHHhh-------------ccEEEEECCccc
Confidence 3467999999999999888887764 2468899999999999999999986 235888776544
Q ss_pred CchhhhhHHHHHHHHHHHHHHHHHHhCCeEEEe
Q 002903 501 KDAGRFSAAWQLYKAQEELIKVAKQYGIKLTMF 533 (868)
Q Consensus 501 KDgG~laa~W~Ly~Aq~~L~~v~~~~gV~l~~F 533 (868)
-+- .-..+..+|+++.+.|+++|..+..-
T Consensus 299 vEi----p~e~vp~~QK~II~~c~~~gKPVI~A 327 (526)
T 4drs_A 299 MEI----PPEKIFVAQKCMISKCNVAGKPVVTA 327 (526)
T ss_dssp HHS----CGGGHHHHHHHHHHHHHHHTCCEEEE
T ss_pred ccC----CHHHHHHHHHHHHHHHHHcCCeEEEh
Confidence 444 45689999999999999999988763
No 25
>1fa2_A Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.30A {Ipomoea batatas} SCOP: c.1.8.1
Probab=38.20 E-value=17 Score=41.59 Aligned_cols=50 Identities=34% Similarity=0.682 Sum_probs=34.9
Q ss_pred CCeeEEEE----eeccCCCchhhhhHHHHHHHHHHHHHHHHHHhCCeEEE---ecCCCCCCCC
Q 002903 487 NGKQEVMI----GYSDSGKDAGRFSAAWQLYKAQEELIKVAKQYGIKLTM---FHGRGGTVGR 542 (868)
Q Consensus 487 ~~~QeVMl----GYSDS~KDgG~laa~W~Ly~Aq~~L~~v~~~~gV~l~~---FHGRGGsvgR 542 (868)
.|..-||+ |.--+..+ --=+|+-|+ +|.++++++|.|+.. ||+.||.||=
T Consensus 46 ~GVdGVmvDVWWGiVE~~~P---~~YdWsgY~---~L~~mv~~~GLKlq~vmSFHqCGgNVGD 102 (498)
T 1fa2_A 46 GGCDGVMVDVWWGIIEAKGP---KQYDWSAYR---ELFQLVKKCGLKIQAIMSFHQCGGNVGD 102 (498)
T ss_dssp TTCCEEEEEEEHHHHTCSBT---TBCCCHHHH---HHHHHHHHTTCEEEEEEECSCBCCCTTC
T ss_pred cCCCEEEEEeEeeeeccCCC---CccCcHHHH---HHHHHHHHcCCeEEEEEEeeecCCCCCC
Confidence 46666776 33332222 223788886 688899999999854 9999999875
No 26
>1wdp_A Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.27A {Glycine max} SCOP: c.1.8.1 PDB: 1bfn_A* 1q6c_A 1wdr_A* 1v3i_A* 1v3h_A* 1q6d_A* 1q6g_A* 1wdq_A* 1wds_A* 1q6e_A* 1q6f_A* 2dqx_A 1byb_A* 1bya_A* 1byc_A* 1byd_A* 1uko_A 1ukp_A 1btc_A*
Probab=37.61 E-value=17 Score=41.46 Aligned_cols=50 Identities=30% Similarity=0.639 Sum_probs=34.9
Q ss_pred CCeeEEEE----eeccCCCchhhhhHHHHHHHHHHHHHHHHHHhCCeEEE---ecCCCCCCCC
Q 002903 487 NGKQEVMI----GYSDSGKDAGRFSAAWQLYKAQEELIKVAKQYGIKLTM---FHGRGGTVGR 542 (868)
Q Consensus 487 ~~~QeVMl----GYSDS~KDgG~laa~W~Ly~Aq~~L~~v~~~~gV~l~~---FHGRGGsvgR 542 (868)
.|..-||+ |.--+..+ --=+|+-|+ +|.++++++|.|+.. ||+.||.||=
T Consensus 45 ~GVdGVmvDVWWGiVE~~~P---~~YdWsgY~---~l~~mv~~~GLKlq~vmSFHqCGgNVGD 101 (495)
T 1wdp_A 45 AGVDGVMVDVWWGIIELKGP---KQYDWRAYR---SLLQLVQECGLTLQAIMSFHQCGGNVGD 101 (495)
T ss_dssp TTCCEEEEEEEHHHHTCSST---TCCCCHHHH---HHHHHHHHTTCEEEEEEECSCBCCSTTC
T ss_pred cCCCEEEEEeEeeeeccCCC---CccCcHHHH---HHHHHHHHcCCeEEEEEEeeecCCCCCC
Confidence 46666777 33332222 223788886 688899999999854 9999999875
No 27
>2xfr_A Beta-amylase; hydrolase, carbohydrate metabolism, glycosyl hydrolase famil starch degradation, germination; 0.97A {Hordeum vulgare} PDB: 2xff_A 2xfy_A* 2xg9_A* 2xgb_A* 2xgi_A* 1b1y_A*
Probab=35.15 E-value=20 Score=41.26 Aligned_cols=50 Identities=32% Similarity=0.627 Sum_probs=34.7
Q ss_pred CCeeEEEEe----eccCCCchhhhhHHHHHHHHHHHHHHHHHHhCCeEEE---ecCCCCCCCC
Q 002903 487 NGKQEVMIG----YSDSGKDAGRFSAAWQLYKAQEELIKVAKQYGIKLTM---FHGRGGTVGR 542 (868)
Q Consensus 487 ~~~QeVMlG----YSDS~KDgG~laa~W~Ly~Aq~~L~~v~~~~gV~l~~---FHGRGGsvgR 542 (868)
.+..-||+= .--+..+ --=+|+-|+ +|.++++++|.|+.. ||+.||.||=
T Consensus 43 ~GVdGVmvDVWWGiVE~~~P---~~YdWsgY~---~L~~mvr~~GLKlq~vmSFHqCGgNVGD 99 (535)
T 2xfr_A 43 AGVDGVMVDVWWGLVEGKGP---KAYDWSAYK---QLFELVQKAGLKLQAIMSFHQCGGNVGD 99 (535)
T ss_dssp TTCCEEEEEEEHHHHTCSST---TCCCCHHHH---HHHHHHHHTTCEEEEEEECSCBCCSTTC
T ss_pred cCCCEEEEEeEeeeeccCCC---CccCcHHHH---HHHHHHHHcCCeEEEEEEeeecCCCCCC
Confidence 466667763 3232212 223788886 688899999999854 9999999875
No 28
>4eys_A MCCC family protein; MCCF like, serine peptidase, csgid, structural genomics, NIA national institute of allergy and infectious diseases; HET: AMP; 1.58A {Streptococcus pneumoniae} PDB: 4e94_A*
Probab=27.72 E-value=24 Score=38.52 Aligned_cols=11 Identities=36% Similarity=0.921 Sum_probs=9.5
Q ss_pred eEEEEeeccCC
Q 002903 490 QEVMIGYSDSG 500 (868)
Q Consensus 490 QeVMlGYSDS~ 500 (868)
.-+.+||||-+
T Consensus 105 ~K~~iGySDiT 115 (346)
T 4eys_A 105 QKIFLGFSDTT 115 (346)
T ss_dssp CCEEEECTTHH
T ss_pred CcEEEEecHHH
Confidence 37999999976
No 29
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis}
Probab=26.97 E-value=47 Score=40.38 Aligned_cols=94 Identities=16% Similarity=0.116 Sum_probs=68.5
Q ss_pred HHHhhcCCChhhHHHHHHHHHHcCCC--CC-CccccccCChHHHhcHHHHHHHHhccHHHHhhcCCeeEEEEeeccCCCc
Q 002903 426 AYIISMATAPSDVLAVELLQRECHVK--QP-LRVVPLFEKLADLEAAPAALARLFSVDWYRNRINGKQEVMIGYSDSGKD 502 (868)
Q Consensus 426 ~yIISmt~s~sDvL~V~~L~ke~Gl~--~~-l~VvPLFETi~DL~~a~~il~~Ll~~p~yr~~l~~~QeVMlGYSDS~KD 502 (868)
.-+|.|++++.++-.+.-++++.|+. .. +.|.+..||...+.++++|... + --+.||-.|=+.+
T Consensus 643 ~ImvP~V~t~~E~~~~~~~l~~~g~~~~~~~~~vg~MIEtp~a~~~ad~ia~~----------v---D~~siGtnDLtq~ 709 (794)
T 2ols_A 643 EIMIPFVRTLGEAEAVVKALKENGLERGKNGLRLIMMCELPSNAVLAEQFLQY----------F---DGFSIGSNDMTQL 709 (794)
T ss_dssp EEEECCCCSHHHHHHHHHHHHHTTCCTTGGGCCEEEEECSHHHHHTHHHHHTT----------S---SEEEEEHHHHHHH
T ss_pred eEEecCCCCHHHHHHHHHHHHhcCcccCccCCEEEEEECcHHHHHHHHHHHHh----------C---CEEEECHHHHHHH
Confidence 45889999999999999999999985 23 7899999999999999999853 2 2233333332211
Q ss_pred -hh------hhh-----HHHHHHHHHHHHHHHHHHhCCeEEE
Q 002903 503 -AG------RFS-----AAWQLYKAQEELIKVAKQYGIKLTM 532 (868)
Q Consensus 503 -gG------~la-----a~W~Ly~Aq~~L~~v~~~~gV~l~~ 532 (868)
-| .++ .+=++.++-+.+++.|+++|+.+.+
T Consensus 710 tlg~~R~~~~~~~~~~~~~p~v~~~i~~~v~aar~~g~~vgi 751 (794)
T 2ols_A 710 TLGLDRDSGLVSESFDERNPAVKVMLHLAISACRKQNKYVGI 751 (794)
T ss_dssp HHTCCTTCTTTGGGCCTTSHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred HhCCCCCcchhccccCCCCHHHHHHHHHHHHHHHHhCCEEEE
Confidence 11 111 1235888999999999999999844
No 30
>2xz9_A Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); thermophilic, PEP-utilising enzyme, transferase; 1.68A {Thermoanaerobacter tengcongensis} PDB: 2bg5_A 2xz7_A*
Probab=21.42 E-value=1e+02 Score=33.39 Aligned_cols=145 Identities=14% Similarity=0.131 Sum_probs=86.3
Q ss_pred HHHhhcCCChhhHHHHHHHHH-------HcCCC--CCCccccccCChHHHhcHHHHHHHHhccHHHHhhcCCeeEEEEee
Q 002903 426 AYIISMATAPSDVLAVELLQR-------ECHVK--QPLRVVPLFEKLADLEAAPAALARLFSVDWYRNRINGKQEVMIGY 496 (868)
Q Consensus 426 ~yIISmt~s~sDvL~V~~L~k-------e~Gl~--~~l~VvPLFETi~DL~~a~~il~~Ll~~p~yr~~l~~~QeVMlGY 496 (868)
.-+|.|.++++++..+--+.+ ..|.. ..+.|.+..||...+.++++|... ..-+.||-
T Consensus 138 ~ImvPmV~s~~E~~~a~~~v~~~~~~~r~~G~~~~~~~~vg~mIEtp~av~~~d~Ia~~-------------vD~~siGt 204 (324)
T 2xz9_A 138 QIMYPMISSVEEVRKANSILEEVKAELDREGVKYDKEIKVGIMVEIPSAAVTADILAKE-------------VDFFSIGT 204 (324)
T ss_dssp EEEECSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCTTCEEEEEECSHHHHHTHHHHTTT-------------CSEEEECH
T ss_pred EEEEcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEECcHHHHHHHHHHHHh-------------CcEEEECH
Confidence 457899999999776655543 23653 258899999999999999999753 23455555
Q ss_pred ccCC----------CchhhhhH--HHHHHHHHHHHHHHHHHhCCeEEEecCCCCCCCCCCCchh-hhhhcCCCCcccCce
Q 002903 497 SDSG----------KDAGRFSA--AWQLYKAQEELIKVAKQYGIKLTMFHGRGGTVGRGGGPTH-LAILSQPPDTIHGSL 563 (868)
Q Consensus 497 SDS~----------KDgG~laa--~W~Ly~Aq~~L~~v~~~~gV~l~~FHGRGGsvgRGGGPt~-~aI~aqP~gtv~g~i 563 (868)
.|=+ ...|++-- .=++.++-..+++.|+++|+.+.++ |. + +|-|.. .....+.-. +-.
T Consensus 205 nDLtq~~lg~dR~~~~~~~~~~~~~p~v~~ai~~vv~aar~aG~~vgvc---ge-~--~~dp~~~~~l~~lG~~---~~s 275 (324)
T 2xz9_A 205 NDLTQYTLAVDRMNEHVKEYYQPFHPAILRLVKMVIDAAHKEGKFAAMC---GE-M--AGDPLAAVILLGLGLD---EFS 275 (324)
T ss_dssp HHHHHHHTTCCTTCGGGGGGCCTTCHHHHHHHHHHHHHHHHTTCEEEEC---SG-G--GGCHHHHHHHHHHTCC---EEE
T ss_pred HHHHHHHhCCCCCcccccccCCCCCHHHHHHHHHHHHHHHHHCCceeec---Cc-c--CCCHHHHHHHHHCCCC---EEE
Confidence 4432 11121111 2358899999999999999998663 22 2 334432 223333221 112
Q ss_pred EeeccchhhHhhcCChhHHHHHHHHHHHHHH
Q 002903 564 RVTVQGEVIEQSFGEEHLCFRTLQRFTAATL 594 (868)
Q Consensus 564 rvTeQGEvI~~kYg~~~~A~r~LE~~~aa~l 594 (868)
--..|...+..-|..-.. ...+.++..++
T Consensus 276 i~p~~i~~~~~~~~~~~~--~~~~~~~~~~l 304 (324)
T 2xz9_A 276 MSATSIPEIKNIIRNVEY--EKAKEIAEKAL 304 (324)
T ss_dssp ECGGGHHHHHHHHTTSCH--HHHHHHHHHHH
T ss_pred EChhHHHHHHHHHHHcCH--HHHHHHHHHHH
Confidence 223455555555554433 34555554454
No 31
>3o3m_A Alpha subunit 2-hydroxyisocaproyl-COA dehydratase; atypical dehydratase, lyase; 1.82A {Clostridium difficile} PDB: 3o3n_A* 3o3o_A
Probab=21.24 E-value=2.7e+02 Score=30.66 Aligned_cols=62 Identities=15% Similarity=0.116 Sum_probs=46.8
Q ss_pred CcchhhhHHHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHHHHHHHhccccccc-CCCChHHH
Q 002903 75 TQSVRRSLLQKHARIRNCLAQLYAKDITPDDKQELDEALQREIQAAFRTDEIRR-TQPTPQDE 136 (868)
Q Consensus 75 TEa~RrtvL~~~~~I~~~L~~~d~~~~~~~e~~~~~~~L~~~i~~LW~T~eir~-~kPtv~DE 136 (868)
++..+.-+..-++++...|++.-...++.+...+..+...+.-..+++-.+++. .+|.|+.-
T Consensus 149 ~~~~~~y~~~el~~l~~~LE~~tG~ki~~e~L~eai~~~N~~r~~~~~~~~l~~~~~p~pisg 211 (408)
T 3o3m_A 149 TQSRIDYIKAQFEEAIKQLEIISGKKFDPKKFEEVMKISAENGRLWKYSMSLPADSSPSPMNG 211 (408)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHTTTTTTCSSCSSCG
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccH
Confidence 455566777777888888888877788888777777766555555567888999 99999864
Done!