Your job contains 1 sequence.
>002905
MEKSCTLLIHFDKGTPAIANEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVR
YVLPSEDHTIQKLLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFL
CRLNETEIIEPLIPSVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLS
TEQDPSAKRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNKGEK
GKYIKIIISLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVL
DRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINEVVLMLKKEV
VKTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVR
EIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCLGE
LPFFSVSEEGEDTDSSKKVQQQASSTTVSSRRPAVLADGTYATQSAASETAFSPPTIVQG
TLTSGNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRVEVNKASSQALLIMVSMLQL
GQSPVLPHPIDNDSFDRIVVCIRLLCNTGDNIRKIWLQSCRQSFVKMLSEKQLRESEELK
AKAQISHAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRATGEFVKEGDDANKLNRILQ
LTGFSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVERPQNYTLA
PESSKQIKANIKVSSTETGVIFGNIVYETSNVLERTVVVLNDIHIDIMDYISPAVCTDAA
FRTMWAEFEWENKVSLALVSCFFHTNH
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 002905
(867 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2125259 - symbol:AT4G31490 species:3702 "Arabi... 3586 0. 1
MGI|MGI:1917599 - symbol:Copb1 "coatomer protein complex,... 1931 1.8e-199 1
RGD|620861 - symbol:Copb1 "coatomer protein complex, subu... 1931 1.8e-199 1
UNIPROTKB|A0JN39 - symbol:COPB1 "Coatomer subunit beta" s... 1929 2.9e-199 1
UNIPROTKB|Q5ZIA5 - symbol:COPB1 "Coatomer subunit beta" s... 1928 3.6e-199 1
UNIPROTKB|P53618 - symbol:COPB1 "Coatomer subunit beta" s... 1927 4.7e-199 1
UNIPROTKB|E2R9A2 - symbol:COPB1 "Coatomer subunit beta" s... 1925 7.6e-199 1
UNIPROTKB|D2SW95 - symbol:COPB1 "Coatomer subunit beta" s... 1925 7.6e-199 1
ZFIN|ZDB-GENE-030219-38 - symbol:copb1 "coatomer protein ... 1888 6.3e-195 1
FB|FBgn0008635 - symbol:betaCop "beta-coatomer protein" s... 1881 3.5e-194 1
ASPGD|ASPL0000052724 - symbol:AN1177 species:162425 "Emer... 1839 9.8e-190 1
DICTYBASE|DDB_G0284735 - symbol:copB "coatomer protein co... 1221 3.5e-189 2
WB|WBGene00021292 - symbol:copb-1 species:6239 "Caenorhab... 1657 1.9e-170 1
CGD|CAL0000129 - symbol:SEC26 species:5476 "Candida albic... 1634 5.2e-168 1
UNIPROTKB|Q5A6M6 - symbol:SEC26 "Coatomer subunit beta" s... 1634 5.2e-168 1
POMBASE|SPBC146.14c - symbol:sec26 "coatomer beta subunit... 1491 7.4e-153 1
SGD|S000002646 - symbol:SEC26 "Essential beta-coat protei... 1471 9.8e-151 1
UNIPROTKB|F1S982 - symbol:COPB1 "Coatomer subunit beta" s... 1258 3.6e-128 1
UNIPROTKB|E9PP73 - symbol:COPB1 "Coatomer subunit beta" s... 1174 2.9e-119 1
GENEDB_PFALCIPARUM|PF14_0277 - symbol:PF14_0277 "coatamer... 418 5.0e-85 4
UNIPROTKB|Q8ILG6 - symbol:PF14_0277 "Coatamer protein, be... 418 5.0e-85 4
UNIPROTKB|E9PKQ1 - symbol:COPB1 "Coatomer subunit beta" s... 358 8.8e-32 1
UNIPROTKB|E9PP63 - symbol:COPB1 "Coatomer subunit beta" s... 339 9.8e-30 1
GENEDB_PFALCIPARUM|PFE1400c - symbol:PFE1400c "beta adapt... 296 1.0e-21 2
UNIPROTKB|Q8I3I6 - symbol:PFE1400c "Beta adaptin protein,... 296 1.0e-21 2
UNIPROTKB|E1BW97 - symbol:AP3B1 "Uncharacterized protein"... 185 3.2e-18 2
RGD|1310256 - symbol:Ap3b1 "adaptor-related protein compl... 194 9.7e-18 2
MGI|MGI:1333879 - symbol:Ap3b1 "adaptor-related protein c... 194 3.4e-17 3
UNIPROTKB|Q7YRF1 - symbol:AP3B1 "AP-3 complex subunit bet... 193 7.0e-17 4
UNIPROTKB|O00203 - symbol:AP3B1 "AP-3 complex subunit bet... 193 8.4e-17 3
UNIPROTKB|F1PVY2 - symbol:AP3B1 "AP-3 complex subunit bet... 193 1.1e-16 4
UNIPROTKB|F1S2G1 - symbol:F1S2G1 "Uncharacterized protein... 193 1.6e-16 2
UNIPROTKB|F1P7W8 - symbol:AP3B2 "Uncharacterized protein"... 168 2.8e-16 3
TAIR|locus:2117924 - symbol:AT4G23460 species:3702 "Arabi... 239 3.0e-16 1
UNIPROTKB|F1NY63 - symbol:AP3B2 "Uncharacterized protein"... 166 3.3e-16 3
UNIPROTKB|F1RI97 - symbol:F1RI97 "Uncharacterized protein... 164 3.4e-16 2
UNIPROTKB|Q32PG1 - symbol:AP3B1 "AP-3 complex subunit bet... 193 4.3e-16 4
UNIPROTKB|J9P1J6 - symbol:AP3B2 "Uncharacterized protein"... 165 6.2e-16 3
UNIPROTKB|E5RJ68 - symbol:AP3B1 "AP-3 complex subunit bet... 183 8.3e-16 3
MGI|MGI:1100869 - symbol:Ap3b2 "adaptor-related protein c... 164 2.4e-15 3
RGD|1308950 - symbol:Ap3b2 "adaptor-related protein compl... 164 2.4e-15 3
UNIPROTKB|E1BME2 - symbol:AP3B2 "Uncharacterized protein"... 158 2.6e-15 3
UNIPROTKB|Q13367 - symbol:AP3B2 "AP-3 complex subunit bet... 164 3.0e-15 3
UNIPROTKB|B7ZKS0 - symbol:AP3B2 "AP-3 complex subunit bet... 164 3.2e-15 3
UNIPROTKB|C9J1E7 - symbol:AP1B1 "AP-1 complex subunit bet... 226 3.5e-15 1
UNIPROTKB|G3X7G4 - symbol:AP2B1 "AP-2 complex subunit bet... 224 6.3e-15 1
MGI|MGI:1096368 - symbol:Ap1b1 "adaptor protein complex A... 227 6.5e-15 1
ZFIN|ZDB-GENE-061025-1 - symbol:ap1b1 "adaptor-related pr... 227 6.5e-15 1
UNIPROTKB|F1NCR9 - symbol:AP1B1 "Uncharacterized protein"... 226 7.5e-15 1
UNIPROTKB|F1NCI1 - symbol:AP1B1 "Uncharacterized protein"... 226 8.0e-15 1
UNIPROTKB|F1S182 - symbol:LOC100517121 "Uncharacterized p... 224 1.1e-14 1
UNIPROTKB|P63009 - symbol:AP2B1 "AP-2 complex subunit bet... 224 1.4e-14 1
UNIPROTKB|I3L6Y6 - symbol:AP2B1 "Uncharacterized protein"... 224 1.4e-14 1
UNIPROTKB|Q08DS7 - symbol:AP2B1 "AP-1 complex subunit bet... 224 1.4e-14 1
UNIPROTKB|P63010 - symbol:AP2B1 "AP-2 complex subunit bet... 223 1.7e-14 1
MGI|MGI:1919020 - symbol:Ap2b1 "adaptor-related protein c... 223 1.7e-14 1
RGD|71048 - symbol:Ap2b1 "adaptor-related protein complex... 223 1.7e-14 1
UNIPROTKB|E1BXC1 - symbol:AP2B1 "Uncharacterized protein"... 223 1.7e-14 1
UNIPROTKB|E2RIV1 - symbol:AP2B1 "Uncharacterized protein"... 223 1.8e-14 1
UNIPROTKB|E1BY12 - symbol:AP2B1 "Uncharacterized protein"... 223 1.8e-14 1
ZFIN|ZDB-GENE-030131-6564 - symbol:ap2b1 "adaptor-related... 222 2.3e-14 1
UNIPROTKB|E2RRJ6 - symbol:AP1B1 "Uncharacterized protein"... 226 1.8e-13 2
UNIPROTKB|F1RFI2 - symbol:AP1B1 "Uncharacterized protein"... 226 1.8e-13 2
UNIPROTKB|Q10567 - symbol:AP1B1 "AP-1 complex subunit bet... 226 1.9e-13 2
UNIPROTKB|I3LV02 - symbol:AP1B1 "Uncharacterized protein"... 226 1.9e-13 2
FB|FBgn0010380 - symbol:AP-1-2beta "Adaptor Protein compl... 222 2.2e-13 2
DICTYBASE|DDB_G0279141 - symbol:ap1b1 "beta adaptin" spec... 217 2.5e-13 2
DICTYBASE|DDB_G0274003 - symbol:ap3b-2 "beta adaptin" spe... 157 6.2e-13 3
DICTYBASE|DDB_G0272578 - symbol:ap3b-1 "beta adaptin" spe... 157 6.2e-13 3
WB|WBGene00000160 - symbol:apb-1 species:6239 "Caenorhabd... 218 1.1e-12 2
UNIPROTKB|B7ZKR7 - symbol:AP3B2 "AP3B2 protein" species:9... 130 1.2e-12 4
UNIPROTKB|F1MIF2 - symbol:AP1B1 "Uncharacterized protein"... 225 1.2e-12 3
RGD|2064 - symbol:Ap1b1 "adaptor-related protein complex ... 210 6.1e-12 2
UNIPROTKB|P52303 - symbol:Ap1b1 "AP-1 complex subunit bet... 210 6.1e-12 2
GENEDB_PFALCIPARUM|MAL7P1.164 - symbol:MAL7P1.164 "adapte... 196 1.3e-11 1
UNIPROTKB|Q8IBF8 - symbol:MAL7P1.164 "Adapter-related pro... 196 1.3e-11 1
ASPGD|ASPL0000012367 - symbol:AN4207 species:162425 "Emer... 134 1.7e-11 2
FB|FBgn0003210 - symbol:rb "ruby" species:7227 "Drosophil... 156 2.0e-11 2
UNIPROTKB|Q7Z451 - symbol:AP2B1 "AP-2 complex subunit bet... 188 9.5e-11 1
UNIPROTKB|G4NIQ6 - symbol:MGG_04150 "AP-2 complex subunit... 185 1.5e-10 1
UNIPROTKB|E1BWK3 - symbol:AP3D1 "Uncharacterized protein"... 187 1.8e-10 1
POMBASE|SPBC947.02 - symbol:apl2 "AP-1 adaptor complex su... 182 2.9e-10 1
UNIPROTKB|O14617 - symbol:AP3D1 "AP-3 complex subunit del... 182 6.1e-10 1
UNIPROTKB|Q865S1 - symbol:AP3D1 "AP-3 complex subunit del... 181 8.2e-10 1
UNIPROTKB|E2QXV5 - symbol:AP3D1 "Uncharacterized protein"... 181 8.3e-10 1
MGI|MGI:107734 - symbol:Ap3d1 "adaptor-related protein co... 179 1.3e-09 1
FB|FBgn0001087 - symbol:g "garnet" species:7227 "Drosophi... 186 2.2e-09 2
UNIPROTKB|E1C262 - symbol:AP3D1 "Uncharacterized protein"... 187 3.2e-09 2
ZFIN|ZDB-GENE-050208-437 - symbol:ap3d1 "adaptor-related ... 187 4.5e-09 2
WB|WBGene00000163 - symbol:apb-3 species:6239 "Caenorhabd... 153 8.0e-09 3
UNIPROTKB|G4N974 - symbol:MGG_03320 "AP-1 complex subunit... 168 1.1e-08 1
DICTYBASE|DDB_G0281957 - symbol:ap1g1 "gamma adaptin" spe... 118 1.6e-08 3
SGD|S000001618 - symbol:APL2 "Beta-adaptin subunit of the... 170 4.4e-08 2
ASPGD|ASPL0000034670 - symbol:AN3029 species:162425 "Emer... 167 5.2e-08 2
GENEDB_PFALCIPARUM|PF14_0529 - symbol:PF14_0529 "gamma-ad... 120 5.4e-08 2
UNIPROTKB|Q8IKS3 - symbol:PF14_0529 "Gamma-adaptin, putat... 120 5.4e-08 2
CGD|CAL0003949 - symbol:APL2 species:5476 "Candida albica... 167 6.8e-08 2
UNIPROTKB|Q5AEN7 - symbol:APL2 "Potential clathrin-associ... 167 6.8e-08 2
ASPGD|ASPL0000003399 - symbol:AN5950 species:162425 "Emer... 169 6.8e-08 2
DICTYBASE|DDB_G0283319 - symbol:ap4b1 "adaptor-related pr... 160 7.1e-08 2
WARNING: Descriptions of 54 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2125259 [details] [associations]
symbol:AT4G31490 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0030276 "clathrin
binding" evidence=ISS] [GO:0016020 "membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR002553
InterPro:IPR011710 InterPro:IPR016024 InterPro:IPR016460
Pfam:PF01602 Pfam:PF07718 PIRSF:PIRSF005727 GO:GO:0005829
GO:GO:0006886 EMBL:CP002687 GenomeReviews:CT486007_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0016020 GO:GO:0016192 GO:GO:0005198
eggNOG:COG5096 GO:GO:0030126 EMBL:AL080283 EMBL:AL161579
EMBL:AK228881 IPI:IPI00528352 PIR:T10679 RefSeq:NP_194877.2
UniGene:At.47266 ProteinModelPortal:Q9SV20 SMR:Q9SV20 IntAct:Q9SV20
STRING:Q9SV20 PaxDb:Q9SV20 PRIDE:Q9SV20 EnsemblPlants:AT4G31490.1
GeneID:829276 KEGG:ath:AT4G31490 TAIR:At4g31490
HOGENOM:HOG000207417 InParanoid:Q9SV20 OMA:NDIHVDI PhylomeDB:Q9SV20
ProtClustDB:CLSN2685858 Genevestigator:Q9SV20 PANTHER:PTHR10635
Uniprot:Q9SV20
Length = 948
Score = 3586 (1267.4 bits), Expect = 0., P = 0.
Identities = 696/856 (81%), Positives = 772/856 (90%)
Query: 1 MEKSCTLLIHFDKGTPAIANEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVR 60
M+KS T+L+H+DKGTPA+ANEIKEALEGNDV AKVDAMKKAIMLLLNGET+PQLFITI+R
Sbjct: 1 MDKSSTMLVHYDKGTPAVANEIKEALEGNDVEAKVDAMKKAIMLLLNGETIPQLFITIIR 60
Query: 61 YVLPSEDHTIQKLLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFL 120
YVLPSEDHTIQKLLLLYLE+I+KTD+KG+VLPEMILICQNLRNNLQHPNEYIRGVTLRFL
Sbjct: 61 YVLPSEDHTIQKLLLLYLELIEKTDSKGKVLPEMILICQNLRNNLQHPNEYIRGVTLRFL 120
Query: 121 CRLNETEIIEPLIPSVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLS 180
CR+ ETEI+EPL PSVLQNL+HRHP++RRNAILA+M+IYKLP G+QL VDAPEMIEKVLS
Sbjct: 121 CRMKETEIVEPLTPSVLQNLEHRHPFVRRNAILAIMSIYKLPHGDQLFVDAPEMIEKVLS 180
Query: 181 TEQDPSAKRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXX 240
TEQDPSAKRNAFLMLFTC ++RA+NYLL++VD+VS+W E LQMVVLELIR VC+T
Sbjct: 181 TEQDPSAKRNAFLMLFTCAEERAVNYLLSNVDKVSDWNESLQMVVLELIRSVCKTKPAEK 240
Query: 241 XXXXXXXXSLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVL 300
SLL+A S+AVIYECAGTLVSLSSAPTAIRAAANTY QLLLSQSDNNVKLI+L
Sbjct: 241 GKYIKIIISLLSATSSAVIYECAGTLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLILL 300
Query: 301 DRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXX 360
DRL EL++ HRDIMV+LI+DVLRAL+SPNLDIRRKTLDI L+LIT NIN
Sbjct: 301 DRLYELKTLHRDIMVELIIDVLRALSSPNLDIRRKTLDIALDLITHHNINEVVQMLKKEV 360
Query: 361 XXTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVR 420
TQSGELEKNGEYRQMLIQAIH+CA+KFPEVASTVVHLLMDFLGDSNVASA+DV++FVR
Sbjct: 361 VKTQSGELEKNGEYRQMLIQAIHACAVKFPEVASTVVHLLMDFLGDSNVASALDVVVFVR 420
Query: 421 EIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCLGE 480
EIIE NPKLRVSIITRLLD FYQIRA +VC CALWIIGEYC SLSEVE+GI+TI QCLGE
Sbjct: 421 EIIETNPKLRVSIITRLLDTFYQIRAGKVCPCALWIIGEYCLSLSEVESGISTITQCLGE 480
Query: 481 LPFFSVSEEGEDTDSSKKXXXXXXXXXXXXRRPAVLADGTYATQSAASETAFSPPTIVQG 540
LPF+SVSEE E T++SKK R+P +LADGTYATQSAASET FS PT+VQG
Sbjct: 481 LPFYSVSEESEPTETSKKIQPTSSAMVSS-RKPVILADGTYATQSAASETTFSSPTVVQG 539
Query: 541 TLTSGNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRVEVNKASSQALLIMVSMLQL 600
+LTSGNLR+LLLTGDFFLGAVVACTLTKLVLRLEEVQ S+ EVNK SQALLIMVS+LQL
Sbjct: 540 SLTSGNLRALLLTGDFFLGAVVACTLTKLVLRLEEVQSSKTEVNKTVSQALLIMVSILQL 599
Query: 601 GQSPVLPHPIDNDSFDRIVVCIRLLCNTGDNIRKIWLQSCRQSFVKMLSEKQLRESEELK 660
GQSPV PHPIDNDS++RI++CI+LLC+ ++KIWL+SCRQSFVKM+SEKQLRE EELK
Sbjct: 600 GQSPVSPHPIDNDSYERIMLCIKLLCHRNVEMKKIWLESCRQSFVKMISEKQLREMEELK 659
Query: 661 AKAQISHAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRATGEFVKEGDDANKLNRILQ 720
AK Q +HAQPDDLIDF+HLKSRKGMSQLELED+VQDDLKRATGEF K+ +DANKLNRILQ
Sbjct: 660 AKTQTTHAQPDDLIDFFHLKSRKGMSQLELEDQVQDDLKRATGEFTKDENDANKLNRILQ 719
Query: 721 LTGFSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVERPQNYTLA 780
LTGFSDPVYAEAYVTVHHYDI L+VTVINRTKETLQNLCLELATMGDLKLVERPQNY+LA
Sbjct: 720 LTGFSDPVYAEAYVTVHHYDIALEVTVINRTKETLQNLCLELATMGDLKLVERPQNYSLA 779
Query: 781 PESSKQIKANIKVSSTETGVIFGNIVYETSNVLERTVVVLNDIHIDIMDYISPAVCTDAA 840
PE S QIKANIKVSSTETGVIFGNIVYETSNV+ER VVVLNDIHIDIMDYISPAVC++ A
Sbjct: 780 PERSMQIKANIKVSSTETGVIFGNIVYETSNVMERNVVVLNDIHIDIMDYISPAVCSEVA 839
Query: 841 FRTMWAEFEWENKVSL 856
FRTMWAEFEWENKV++
Sbjct: 840 FRTMWAEFEWENKVAV 855
>MGI|MGI:1917599 [details] [associations]
symbol:Copb1 "coatomer protein complex, subunit beta 1"
species:10090 "Mus musculus" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=ISO;IDA] [GO:0005798
"Golgi-associated vesicle" evidence=ISO] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=ISO]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=ISO] [GO:0030137 "COPI-coated vesicle"
evidence=IDA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
InterPro:IPR002553 InterPro:IPR011710 InterPro:IPR016024
InterPro:IPR016460 Pfam:PF01602 Pfam:PF07718 PIRSF:PIRSF005727
MGI:MGI:1917599 GO:GO:0005886 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0005198
EMBL:CH466531 GO:GO:0006891 GO:GO:0005793 eggNOG:COG5096
GO:GO:0030137 GO:GO:0030126 HOGENOM:HOG000207417 PANTHER:PTHR10635
CTD:1315 GeneTree:ENSGT00390000005270 HOVERGEN:HBG005380
OMA:DFEWENK OrthoDB:EOG4KPT94 EMBL:AF231925 EMBL:AK149828
EMBL:AK152222 EMBL:AK161544 EMBL:AK172214 EMBL:BC030837
IPI:IPI00120503 RefSeq:NP_203534.1 UniGene:Mm.277024
ProteinModelPortal:Q9JIF7 SMR:Q9JIF7 DIP:DIP-42642N IntAct:Q9JIF7
MINT:MINT-1489518 STRING:Q9JIF7 PhosphoSite:Q9JIF7 PaxDb:Q9JIF7
PRIDE:Q9JIF7 Ensembl:ENSMUST00000033012 GeneID:70349 KEGG:mmu:70349
InParanoid:Q3T9Y4 NextBio:331414 Bgee:Q9JIF7 CleanEx:MM_COPB1
Genevestigator:Q9JIF7 GermOnline:ENSMUSG00000030754 Uniprot:Q9JIF7
Length = 953
Score = 1931 (684.8 bits), Expect = 1.8e-199, P = 1.8e-199
Identities = 407/865 (47%), Positives = 570/865 (65%)
Query: 2 EKSCTLLIHFDKGT-PAIANEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVR 60
E C LI+ + P +K LE DV +K +A+KK I+++LNGE LP L +TI+R
Sbjct: 5 ENVCYTLINVPMDSEPPSEISLKNDLEKGDVKSKTEALKKVIIMILNGEKLPGLLMTIIR 64
Query: 61 YVLPSEDHTIQKLLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFL 120
+VLP +DHTI+KLLL++ EI+ KT GR+L EMIL+C R +LQHPNE+IRG TLRFL
Sbjct: 65 FVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGSTLRFL 124
Query: 121 CRLNETEIIEPLIPSVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLS 180
C+L E E++EPL+P++ L+HRH Y+RRNA+LA+ IY+ E L+ DAPE+I L
Sbjct: 125 CKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYR--NFEHLIPDAPELIHDFLV 182
Query: 181 TEQDPSAKRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXX 240
E+D S KRNAF+ML DQDRA++YL T +D+V +G++LQ+V++ELI KVC N
Sbjct: 183 NEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPSER 242
Query: 241 XXXXXXXXSLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVL 300
+LL + S AV YE AGTLV+LSSAPTAI+AAA Y L++ +SDNNVKLIVL
Sbjct: 243 ARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLIVL 302
Query: 301 DRLNELRS--SHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXX 358
DRL EL+ +H ++ DL+MD+LR L++P+L++R+KTL + L+L++ RN+
Sbjct: 303 DRLVELKEHPAHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVLKK 362
Query: 359 XXXXTQS-GELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVII 417
T + E E +YRQ+L++ +HSC+++FP++A+ V+ +LM+FL DSN A+A DV+
Sbjct: 363 EVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDSNEAAAADVLE 422
Query: 418 FVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQC 477
FVRE I+ LR+ I+ ++L+ F+ I++ ++ ALWI+GEYC + ++++ + +++
Sbjct: 423 FVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKEDIQSVMTEVRRS 482
Query: 478 LGELPFFSVSEEGEDTDSSKKXXXXXXXXXXXXRRPAVLADGTYATQSAASETAFSPPTI 537
LGE+P SE ++ K + V GTYATQSA S S PT
Sbjct: 483 LGEIPIVE-SEIKKEAGELKPEEEITVGPV----QKLVTEMGTYATQSALSS---SRPTK 534
Query: 538 VQGTLTSGNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRVEVNKASSQALLIMVSM 597
+ LR LL GDFF+ A +A TLTK+ LR + + + N ++A+L+M ++
Sbjct: 535 KEEDRPP--LRGFLLDGDFFVAASLATTLTKIALRYVALVQEKKKQNSFVAEAMLLMATI 592
Query: 598 LQLGQSPVLPHPIDNDSFDRIVVCIRLLCNTGDNIRKIWLQSCRQSFVKMLSEKQLRE-- 655
L LG+S + PI +D DRI +C+++L + I+ + CRQS +MLS K E
Sbjct: 593 LHLGKSSLPKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRQSLSQMLSAKLEEEKL 652
Query: 656 SEELKAKAQISHAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRATGEFV-KEGDD--A 712
S++ +++ + QPDD I F L ++ M+ E D+ Q L A G KE D A
Sbjct: 653 SQKKESEKRNVTVQPDDPISFMQLTAKNEMNCKE--DQFQLSLLAAMGNTQRKEAADPLA 710
Query: 713 NKLNRILQLTGFSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVE 772
+KLN++ QLTGFSDPVYAEAYV V+ YDIVLDV V+N+T +TLQN LELAT+GDLKLVE
Sbjct: 711 SKLNKVTQLTGFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVE 770
Query: 773 RPQNYTLAPESSKQIKANIKVSSTETGVIFGNIVYETSNVL-ERTVVVLNDIHIDIMDYI 831
+P TLAP IKAN+KV+STE G+IFGNIVY+ S +R VVL+DIHIDIMDYI
Sbjct: 771 KPSPLTLAPHDFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYI 830
Query: 832 SPAVCTDAAFRTMWAEFEWENKVSL 856
PA CTDA FR MWAEFEWENKV++
Sbjct: 831 QPATCTDAEFRQMWAEFEWENKVTV 855
>RGD|620861 [details] [associations]
symbol:Copb1 "coatomer protein complex, subunit beta 1"
species:10116 "Rattus norvegicus" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005793
"endoplasmic reticulum-Golgi intermediate compartment"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=ISO;IDA]
[GO:0005798 "Golgi-associated vesicle" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=TAS] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=IDA] [GO:0030126 "COPI vesicle
coat" evidence=IDA] [GO:0030137 "COPI-coated vesicle" evidence=ISO]
InterPro:IPR002553 InterPro:IPR011710 InterPro:IPR016024
InterPro:IPR016460 Pfam:PF01602 Pfam:PF07718 PIRSF:PIRSF005727
RGD:620861 GO:GO:0005783 GO:GO:0005886 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0005198 GO:GO:0006891 GO:GO:0005793
eggNOG:COG5096 GO:GO:0030126 GO:GO:0006890 HOGENOM:HOG000207417
PANTHER:PTHR10635 CTD:1315 GeneTree:ENSGT00390000005270
HOVERGEN:HBG005380 OMA:DFEWENK OrthoDB:EOG4KPT94 EMBL:X57228
EMBL:BC061882 IPI:IPI00211812 PIR:S13520 RefSeq:NP_542959.1
UniGene:Rn.4327 ProteinModelPortal:P23514 IntAct:P23514
STRING:P23514 PRIDE:P23514 Ensembl:ENSRNOT00000016292 GeneID:114023
KEGG:rno:114023 UCSC:RGD:620861 InParanoid:P23514 NextBio:618175
Genevestigator:P23514 GermOnline:ENSRNOG00000012000 Uniprot:P23514
Length = 953
Score = 1931 (684.8 bits), Expect = 1.8e-199, P = 1.8e-199
Identities = 407/865 (47%), Positives = 570/865 (65%)
Query: 2 EKSCTLLIHFDKGT-PAIANEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVR 60
E C LI+ + P +K LE DV +K +A+KK I+++LNGE LP L +TI+R
Sbjct: 5 ENVCYTLINVPMDSEPPSEISLKNDLEKGDVKSKTEALKKVIIMILNGEKLPGLLMTIIR 64
Query: 61 YVLPSEDHTIQKLLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFL 120
+VLP +DHTI+KLLL++ EI+ KT GR+L EMIL+C R +LQHPNE+IRG TLRFL
Sbjct: 65 FVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGSTLRFL 124
Query: 121 CRLNETEIIEPLIPSVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLS 180
C+L E E++EPL+P++ L+HRH Y+RRNA+LA+ IY+ E L+ DAPE+I L
Sbjct: 125 CKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYR--NFENLIPDAPELIHDFLV 182
Query: 181 TEQDPSAKRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXX 240
E+D S KRNAF+ML DQDRA++YL T +D+V +G++LQ+V++ELI KVC N
Sbjct: 183 NEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPSER 242
Query: 241 XXXXXXXXSLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVL 300
+LL + S AV YE AGTLV+LSSAPTAI+AAA Y L++ +SDNNVKLIVL
Sbjct: 243 ARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLIVL 302
Query: 301 DRLNELRS--SHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXX 358
DRL EL+ +H ++ DL+MD+LR L++P+L++R+KTL + L+L++ RN+
Sbjct: 303 DRLVELKEHPAHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVLKK 362
Query: 359 XXXXTQS-GELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVII 417
T + E E +YRQ+L++ +HSC+++FP++A+ V+ +LM+FL DSN A+A DV+
Sbjct: 363 EVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDSNEAAAADVLE 422
Query: 418 FVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQC 477
FVRE I+ LR+ I+ ++L+ F+ I++ ++ ALWI+GEYC + ++++ + +++
Sbjct: 423 FVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKEDIQSVMTEVRRS 482
Query: 478 LGELPFFSVSEEGEDTDSSKKXXXXXXXXXXXXRRPAVLADGTYATQSAASETAFSPPTI 537
LGE+P SE ++ K + V GTYATQSA S S PT
Sbjct: 483 LGEIPIVE-SEIKKEAGELKPEEEITVGPV----QKLVTEMGTYATQSALSS---SRPTK 534
Query: 538 VQGTLTSGNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRVEVNKASSQALLIMVSM 597
+ LR LL GDFF+ A +A TLTK+ LR + + + N ++A+L+M ++
Sbjct: 535 KEEDRPP--LRGFLLDGDFFVAASLATTLTKIALRYVALVQEKKKQNSFVAEAMLLMATI 592
Query: 598 LQLGQSPVLPHPIDNDSFDRIVVCIRLLCNTGDNIRKIWLQSCRQSFVKMLSEKQLRE-- 655
L LG+S + PI +D DRI +C+++L + I+ + CRQS +MLS K E
Sbjct: 593 LHLGKSSLPKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRQSLSQMLSAKLEEEKL 652
Query: 656 SEELKAKAQISHAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRATGEFV-KEGDD--A 712
S++ +++ + QPDD I F L ++ M+ E D+ Q L A G KE D A
Sbjct: 653 SQKKESEKRNVTVQPDDPISFMQLTAKNEMNCKE--DQFQLSLLAAMGNTQRKEAADPLA 710
Query: 713 NKLNRILQLTGFSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVE 772
+KLN++ QLTGFSDPVYAEAYV V+ YDIVLDV V+N+T +TLQN LELAT+GDLKLVE
Sbjct: 711 SKLNKVTQLTGFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVE 770
Query: 773 RPQNYTLAPESSKQIKANIKVSSTETGVIFGNIVYETSNVL-ERTVVVLNDIHIDIMDYI 831
+P TLAP IKAN+KV+STE G+IFGNIVY+ S +R VVL+DIHIDIMDYI
Sbjct: 771 KPSPLTLAPHDFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYI 830
Query: 832 SPAVCTDAAFRTMWAEFEWENKVSL 856
PA CTDA FR MWAEFEWENKV++
Sbjct: 831 QPATCTDAEFRQMWAEFEWENKVTV 855
>UNIPROTKB|A0JN39 [details] [associations]
symbol:COPB1 "Coatomer subunit beta" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005793
"endoplasmic reticulum-Golgi intermediate compartment"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
InterPro:IPR002553 InterPro:IPR011710 InterPro:IPR016024
InterPro:IPR016460 Pfam:PF01602 Pfam:PF07718 PIRSF:PIRSF005727
GO:GO:0005886 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 PROSITE:PS50077 GO:GO:0016192 GO:GO:0005198
GO:GO:0005793 eggNOG:COG5096 GO:GO:0030126 HOGENOM:HOG000207417
PANTHER:PTHR10635 EMBL:BC126502 IPI:IPI00712785
RefSeq:NP_001071475.1 UniGene:Bt.22486 STRING:A0JN39 PRIDE:A0JN39
Ensembl:ENSBTAT00000008616 GeneID:535533 KEGG:bta:535533 CTD:1315
GeneTree:ENSGT00390000005270 HOVERGEN:HBG005380 InParanoid:A0JN39
OMA:DFEWENK OrthoDB:EOG4KPT94 NextBio:20876774 Uniprot:A0JN39
Length = 953
Score = 1929 (684.1 bits), Expect = 2.9e-199, P = 2.9e-199
Identities = 407/865 (47%), Positives = 569/865 (65%)
Query: 2 EKSCTLLIHFDKGT-PAIANEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVR 60
E C LI+ + P +K LE DV +K +A+KK I+++LNGE LP L +TI+R
Sbjct: 5 ENVCYTLINVPMDSEPPSEISLKNDLEKGDVKSKTEALKKVIIMILNGEKLPGLLMTIIR 64
Query: 61 YVLPSEDHTIQKLLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFL 120
+VLP +DHTI+KLLL++ EI+ KT GR+L EMIL+C R +LQHPNE+IRG TLRFL
Sbjct: 65 FVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGSTLRFL 124
Query: 121 CRLNETEIIEPLIPSVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLS 180
C+L E E++EPL+P++ L+HRH Y+RRNA+LA+ IY+ E L+ DAPE+I L
Sbjct: 125 CKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYR--NFEHLIPDAPELIHDFLV 182
Query: 181 TEQDPSAKRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXX 240
E+D S KRNAF+ML DQDRA++YL T +D+V +G++LQ+V++ELI KVC N
Sbjct: 183 NEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPSER 242
Query: 241 XXXXXXXXSLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVL 300
+LL + S AV YE AGTLV+LSSAPTAI+AAA Y L++ +SDNNVKLIVL
Sbjct: 243 ARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLIVL 302
Query: 301 DRLNELRS--SHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXX 358
DRL EL+ +H ++ DL+MD+LR L++P+L++R+KTL + L+L++ RN+
Sbjct: 303 DRLIELKEHPAHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVLKK 362
Query: 359 XXXXTQS-GELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVII 417
T + E E +YRQ+L++ +HSC+++FP++A+ V+ +LM+FL DSN A+A DV+
Sbjct: 363 EVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDSNEAAAADVLE 422
Query: 418 FVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQC 477
FVRE I+ LR+ I+ ++L+ F+ I++ ++ ALWI+GEYC + ++++ + +++
Sbjct: 423 FVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKDDIQSVMTEVRRS 482
Query: 478 LGELPFFSVSEEGEDTDSSKKXXXXXXXXXXXXRRPAVLADGTYATQSAASETAFSPPTI 537
LGE+P SE ++ K + V GTYATQSA S S PT
Sbjct: 483 LGEIPIVE-SEIKKEAGELKPEEEITVGPV----QKLVTEMGTYATQSALSS---SRPTK 534
Query: 538 VQGTLTSGNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRVEVNKASSQALLIMVSM 597
+ LR LL GDFF+ A +A TLTK+ LR + + + N ++A+L+M ++
Sbjct: 535 KEEERPP--LRGFLLDGDFFVAASLATTLTKIALRYVALVQEKKKQNSFVAEAMLLMATI 592
Query: 598 LQLGQSPVLPHPIDNDSFDRIVVCIRLLCNTGDNIRKIWLQSCRQSFVKMLSEKQLRE-- 655
L LG+S + PI +D DRI +C+++L + I+ + CRQS MLS K E
Sbjct: 593 LHLGKSSLPKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRQSLSHMLSAKLEEEKL 652
Query: 656 SEELKAKAQISHAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRATGEFV-KEGDD--A 712
S++ +++ + QPDD I F L ++ M+ E D+ Q L A G KE D A
Sbjct: 653 SQKKESEKRNVTVQPDDPISFMQLTAKNEMNCKE--DQFQLSLLAAMGNTQRKEAADPLA 710
Query: 713 NKLNRILQLTGFSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVE 772
+KLN++ QLTGFSDPVYAEAYV V+ YDIVLDV V+N+T +TLQN LELAT+GDLKLVE
Sbjct: 711 SKLNKVTQLTGFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVE 770
Query: 773 RPQNYTLAPESSKQIKANIKVSSTETGVIFGNIVYETSNVL-ERTVVVLNDIHIDIMDYI 831
+P TLAP IKAN+KV+STE G+IFGNIVY+ S +R VVL+DIHIDIMDYI
Sbjct: 771 KPSPLTLAPHDFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYI 830
Query: 832 SPAVCTDAAFRTMWAEFEWENKVSL 856
PA CTDA FR MWAEFEWENKV++
Sbjct: 831 QPATCTDAEFRQMWAEFEWENKVTV 855
>UNIPROTKB|Q5ZIA5 [details] [associations]
symbol:COPB1 "Coatomer subunit beta" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR011710 InterPro:IPR016024 InterPro:IPR016460
Pfam:PF01602 Pfam:PF07718 PIRSF:PIRSF005727 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0016192 GO:GO:0005198 eggNOG:COG5096
GO:GO:0030126 HOGENOM:HOG000207417 PANTHER:PTHR10635 CTD:1315
GeneTree:ENSGT00390000005270 HOVERGEN:HBG005380 OMA:DFEWENK
OrthoDB:EOG4KPT94 EMBL:AJ720879 IPI:IPI00599398
RefSeq:NP_001006467.1 UniGene:Gga.3647 ProteinModelPortal:Q5ZIA5
STRING:Q5ZIA5 PRIDE:Q5ZIA5 Ensembl:ENSGALT00000009679 GeneID:423063
KEGG:gga:423063 InParanoid:Q5ZIA5 NextBio:20825590 Uniprot:Q5ZIA5
Length = 953
Score = 1928 (683.7 bits), Expect = 3.6e-199, P = 3.6e-199
Identities = 408/865 (47%), Positives = 567/865 (65%)
Query: 2 EKSCTLLIHFDKGT-PAIANEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVR 60
E C LI+ + P +K LE DV K +A+KK I+++LNGE LP L +TI+R
Sbjct: 5 ENVCYTLINVPMDSEPPSEISLKNDLEKGDVKLKTEALKKVIIMILNGEKLPGLLMTIIR 64
Query: 61 YVLPSEDHTIQKLLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFL 120
+VLP +DHTI+KLLL++ EI+ KT GR+L EMIL+C R +LQHPNE+IRG TLRFL
Sbjct: 65 FVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLQEMILVCDAYRKDLQHPNEFIRGSTLRFL 124
Query: 121 CRLNETEIIEPLIPSVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLS 180
C+L E E++EPL+P++ L+HRH Y+RRNA+LA+ IY+ E L+ DAPE+I L
Sbjct: 125 CKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYR--NFEHLIPDAPELIHDFLV 182
Query: 181 TEQDPSAKRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXX 240
E+D S KRNAF+ML DQDRA++YL T +D+V +G++LQ+V++ELI KVC N
Sbjct: 183 NEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPSER 242
Query: 241 XXXXXXXXSLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVL 300
+LL + S AV YE AGTLV+LSSAPTAI+AAA Y L++ +SDNNVKLIVL
Sbjct: 243 ARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLIVL 302
Query: 301 DRLNELRS--SHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXX 358
DRL EL+ SH ++ DL+MD+LR L++P+L++R+KTL + L+L++ RN+
Sbjct: 303 DRLVELKEHPSHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVLKK 362
Query: 359 XXXXTQS-GELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVII 417
T + E E +YRQ+L++ +HSC+++FP++A+ V+ +LM+FL D+N A+A DV+
Sbjct: 363 EVIKTNNVTEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDNNEAAAADVLE 422
Query: 418 FVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQC 477
FVRE I+ LR I+ ++L+ F+ I++ ++ ALWI+GEYC + ++++ + +++
Sbjct: 423 FVREAIQRFDNLRPLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKEDIQSVMTEVRRS 482
Query: 478 LGELPFFSVSEEGEDTDSSKKXXXXXXXXXXXXRRPAVLADGTYATQSAASETAFSPPTI 537
LGE+P SE ++ K + V GTYATQSA S S PT
Sbjct: 483 LGEIPIVE-SEIKKEAGELKPEEEVTVGPV----QKLVTEMGTYATQSALSS---SRPTK 534
Query: 538 VQGTLTSGNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRVEVNKASSQALLIMVSM 597
+ LR LL GDFF+ A +A TLTK+ LR + + + N ++A+L+M ++
Sbjct: 535 KEEDRPP--LRGFLLDGDFFVAASLATTLTKIALRYVSLVQEKKKQNSFIAEAMLLMATI 592
Query: 598 LQLGQSPVLPHPIDNDSFDRIVVCIRLLCNTGDNIRKIWLQSCRQSFVKMLSEKQLRE-- 655
L LG+S + PI +D DRI +C+++L + I+ + CRQS MLS K E
Sbjct: 593 LHLGKSSLPKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRQSLSHMLSAKLEEEKL 652
Query: 656 SEELKAKAQISHAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRATGEFV-KEGDD--A 712
S++ +++ + QPDD I F L ++ MS E D+ Q L A G KE D A
Sbjct: 653 SQKKESEKRNVTVQPDDPISFMQLTAKNEMSSKE--DQFQLSLLAAMGNTQRKEAADPLA 710
Query: 713 NKLNRILQLTGFSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVE 772
+KLN++ QLTGFSDPVYAEAYV V+ YDIVLDV V+N+T +TLQN LELAT+GDLKLVE
Sbjct: 711 SKLNKVTQLTGFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVE 770
Query: 773 RPQNYTLAPESSKQIKANIKVSSTETGVIFGNIVYETSNVL-ERTVVVLNDIHIDIMDYI 831
+P TLAP IKAN+KV+STE G+IFGNIVY+ S +R VVL+DIHIDIMDYI
Sbjct: 771 KPSPLTLAPHDFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYI 830
Query: 832 SPAVCTDAAFRTMWAEFEWENKVSL 856
PA CTDA FR MWAEFEWENKV++
Sbjct: 831 QPASCTDAEFRQMWAEFEWENKVTV 855
>UNIPROTKB|P53618 [details] [associations]
symbol:COPB1 "Coatomer subunit beta" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005793
"endoplasmic reticulum-Golgi intermediate compartment"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0030126 "COPI
vesicle coat" evidence=ISS] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=ISS] [GO:0000139 "Golgi
membrane" evidence=TAS] [GO:0005798 "Golgi-associated vesicle"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=TAS]
[GO:0016044 "cellular membrane organization" evidence=TAS]
[GO:0048205 "COPI coating of Golgi vesicle" evidence=TAS]
Reactome:REACT_11123 InterPro:IPR002553 InterPro:IPR011710
InterPro:IPR016024 InterPro:IPR016460 Pfam:PF01602 Pfam:PF07718
PIRSF:PIRSF005727 GO:GO:0005829 GO:GO:0005886 GO:GO:0019048
GO:GO:0006886 EMBL:CH471064 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 PROSITE:PS50077 GO:GO:0005198 GO:GO:0006891
GO:GO:0005793 eggNOG:COG5096 GO:GO:0030126 GO:GO:0048205
GO:GO:0006890 HOGENOM:HOG000207417 PANTHER:PTHR10635 CTD:1315
HOVERGEN:HBG005380 OMA:DFEWENK OrthoDB:EOG4KPT94 EMBL:AF084457
EMBL:AF111807 EMBL:AL136593 EMBL:BC037280 EMBL:X82103
IPI:IPI00295851 PIR:A55136 PIR:T46913 RefSeq:NP_001137533.1
RefSeq:NP_001137534.1 RefSeq:NP_057535.1 UniGene:Hs.339278
ProteinModelPortal:P53618 SMR:P53618 DIP:DIP-265N IntAct:P53618
MINT:MINT-1151935 STRING:P53618 PhosphoSite:P53618 DMDM:116241311
PaxDb:P53618 PeptideAtlas:P53618 PRIDE:P53618 DNASU:1315
Ensembl:ENST00000249923 Ensembl:ENST00000439561 GeneID:1315
KEGG:hsa:1315 UCSC:uc001mlg.2 GeneCards:GC11M014436
H-InvDB:HIX0009466 HGNC:HGNC:2231 HPA:CAB012338 MIM:600959
neXtProt:NX_P53618 PharmGKB:PA26747 InParanoid:P53618 ChiTaRS:COPB1
GenomeRNAi:1315 NextBio:5379 ArrayExpress:P53618 Bgee:P53618
CleanEx:HS_COPB1 Genevestigator:P53618 GermOnline:ENSG00000129083
Uniprot:P53618
Length = 953
Score = 1927 (683.4 bits), Expect = 4.7e-199, P = 4.7e-199
Identities = 407/865 (47%), Positives = 569/865 (65%)
Query: 2 EKSCTLLIHFDKGT-PAIANEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVR 60
E C LI+ + P +K LE DV +K +A+KK I+++LNGE LP L +TI+R
Sbjct: 5 ENVCYTLINVPMDSEPPSEISLKNDLEKGDVKSKTEALKKVIIMILNGEKLPGLLMTIIR 64
Query: 61 YVLPSEDHTIQKLLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFL 120
+VLP +DHTI+KLLL++ EI+ KT GR+L EMIL+C R +LQHPNE+IRG TLRFL
Sbjct: 65 FVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGSTLRFL 124
Query: 121 CRLNETEIIEPLIPSVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLS 180
C+L E E++EPL+P++ L+HRH Y+RRNA+LA+ IY+ E L+ DAPE+I L
Sbjct: 125 CKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYR--NFEHLIPDAPELIHDFLV 182
Query: 181 TEQDPSAKRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXX 240
E+D S KRNAF+ML DQDRA++YL T +D+V +G++LQ+V++ELI KVC N
Sbjct: 183 NEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPSER 242
Query: 241 XXXXXXXXSLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVL 300
+LL + S AV YE AGTLV+LSSAPTAI+AAA Y L++ +SDNNVKLIVL
Sbjct: 243 ARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLIVL 302
Query: 301 DRLNELRS--SHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXX 358
DRL EL+ +H ++ DL+MD+LR L++P+L++R+KTL + L+L++ RN+
Sbjct: 303 DRLIELKEHPAHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVLKK 362
Query: 359 XXXXTQS-GELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVII 417
T + E E +YRQ+L++ +HSC+++FP++A+ V+ +LM+FL D+N A+A DV+
Sbjct: 363 EVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDNNEAAAADVLE 422
Query: 418 FVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQC 477
FVRE I+ LR+ I+ ++L+ F+ I++ ++ ALWI+GEYC + ++++ + I++
Sbjct: 423 FVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKEDIQSVMTEIRRS 482
Query: 478 LGELPFFSVSEEGEDTDSSKKXXXXXXXXXXXXRRPAVLADGTYATQSAASETAFSPPTI 537
LGE+P SE ++ K + V GTYATQSA S S PT
Sbjct: 483 LGEIPIVE-SEIKKEAGELKPEEEITVGPV----QKLVTEMGTYATQSALSS---SRPTK 534
Query: 538 VQGTLTSGNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRVEVNKASSQALLIMVSM 597
+ LR LL GDFF+ A +A TLTK+ LR + + + N ++A+L+M ++
Sbjct: 535 KEEDRPP--LRGFLLDGDFFVAASLATTLTKIALRYVALVQEKKKQNSFVAEAMLLMATI 592
Query: 598 LQLGQSPVLPHPIDNDSFDRIVVCIRLLCNTGDNIRKIWLQSCRQSFVKMLSEKQLRE-- 655
L LG+S + PI +D DRI +C+++L + I+ + CRQS MLS K E
Sbjct: 593 LHLGKSSLPKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRQSLSHMLSAKLEEEKL 652
Query: 656 SEELKAKAQISHAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRATGEFV-KEGDD--A 712
S++ +++ + QPDD I F L ++ M+ E D+ Q L A G KE D A
Sbjct: 653 SQKKESEKRNVTVQPDDPISFMQLTAKNEMNCKE--DQFQLSLLAAMGNTQRKEAADPLA 710
Query: 713 NKLNRILQLTGFSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVE 772
+KLN++ QLTGFSDPVYAEAYV V+ YDIVLDV V+N+T +TLQN LELAT+GDLKLVE
Sbjct: 711 SKLNKVTQLTGFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVE 770
Query: 773 RPQNYTLAPESSKQIKANIKVSSTETGVIFGNIVYETSNVL-ERTVVVLNDIHIDIMDYI 831
+P TLAP IKAN+KV+STE G+IFGNIVY+ S +R VVL+DIHIDIMDYI
Sbjct: 771 KPSPLTLAPHDFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYI 830
Query: 832 SPAVCTDAAFRTMWAEFEWENKVSL 856
PA CTDA FR MWAEFEWENKV++
Sbjct: 831 QPATCTDAEFRQMWAEFEWENKVTV 855
>UNIPROTKB|E2R9A2 [details] [associations]
symbol:COPB1 "Coatomer subunit beta" species:9615 "Canis
lupus familiaris" [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
InterPro:IPR002553 InterPro:IPR011710 InterPro:IPR016024
InterPro:IPR016460 Pfam:PF01602 Pfam:PF07718 PIRSF:PIRSF005727
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0005198 GO:GO:0030126 PANTHER:PTHR10635
CTD:1315 GeneTree:ENSGT00390000005270 OMA:DFEWENK EMBL:AAEX03012936
RefSeq:XP_534069.3 Ensembl:ENSCAFT00000013410 GeneID:476866
KEGG:cfa:476866 Uniprot:E2R9A2
Length = 953
Score = 1925 (682.7 bits), Expect = 7.6e-199, P = 7.6e-199
Identities = 406/865 (46%), Positives = 569/865 (65%)
Query: 2 EKSCTLLIHFDKGT-PAIANEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVR 60
E C LI+ + P +K LE DV +K +A+KK I+++LNGE LP L +TI+R
Sbjct: 5 ENVCYTLINVPMDSEPPSEISLKNDLEKGDVKSKTEALKKVIIMILNGEKLPGLLMTIIR 64
Query: 61 YVLPSEDHTIQKLLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFL 120
+VLP +DHTI+KLLL++ EI+ KT GR+L EMIL+C R +LQHPNE+IRG TLRFL
Sbjct: 65 FVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGSTLRFL 124
Query: 121 CRLNETEIIEPLIPSVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLS 180
C+L E E++EPL+P++ L+HRH Y+RRNA+LA+ IY+ E L+ DAPE+I L
Sbjct: 125 CKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYR--NFEHLIPDAPELIHDFLV 182
Query: 181 TEQDPSAKRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXX 240
E+D S KRNAF+ML DQDRA++YL T +D+V +G++LQ+V++ELI KVC N
Sbjct: 183 NEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVHTFGDILQLVIVELIYKVCHANPSER 242
Query: 241 XXXXXXXXSLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVL 300
+LL + S AV YE AGTLV+LSSAPTAI+AAA Y L++ +SDNNVKLIVL
Sbjct: 243 ARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLIVL 302
Query: 301 DRLNELRS--SHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXX 358
DRL EL+ +H ++ DL+MD+LR L++P+L++R+KTL + L+L++ RN+
Sbjct: 303 DRLIELKEHPAHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVLKK 362
Query: 359 XXXXTQS-GELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVII 417
T + E E +YRQ+L++ +HSC+++FP++A+ V+ +LM+FL D+N A+A DV+
Sbjct: 363 EVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDNNEAAAADVLE 422
Query: 418 FVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQC 477
FVRE I+ LR+ I+ ++L+ F+ I++ ++ ALWI+GEYC + ++++ + +++
Sbjct: 423 FVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKEDIQSVMTEVRRS 482
Query: 478 LGELPFFSVSEEGEDTDSSKKXXXXXXXXXXXXRRPAVLADGTYATQSAASETAFSPPTI 537
LGE+P SE ++ K + V GTYATQSA S S PT
Sbjct: 483 LGEIPIVE-SEIKKEAGELKPEEEITVGPV----QKLVTEMGTYATQSALSS---SRPTK 534
Query: 538 VQGTLTSGNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRVEVNKASSQALLIMVSM 597
+ LR LL GDFF+ A +A TLTK+ LR + + + N ++A+L+M ++
Sbjct: 535 KEEERPP--LRGFLLDGDFFVAASLATTLTKIALRYVALVQEKKKQNSFVAEAMLLMATI 592
Query: 598 LQLGQSPVLPHPIDNDSFDRIVVCIRLLCNTGDNIRKIWLQSCRQSFVKMLSEKQLRE-- 655
L LG+S + PI +D DRI +C+++L + I+ + CRQS MLS K E
Sbjct: 593 LHLGKSSLPKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRQSLSHMLSAKLEEEKL 652
Query: 656 SEELKAKAQISHAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRATGEFV-KEGDD--A 712
S++ +++ + QPDD I F L ++ M+ E D+ Q L A G KE D A
Sbjct: 653 SQKKESEKRNVTVQPDDPISFMQLTAKNEMNCKE--DQFQLSLLAAMGNTQRKEAADPLA 710
Query: 713 NKLNRILQLTGFSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVE 772
+KLN++ QLTGFSDPVYAEAYV V+ YDIVLDV V+N+T +TLQN LELAT+GDLKLVE
Sbjct: 711 SKLNKVTQLTGFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVE 770
Query: 773 RPQNYTLAPESSKQIKANIKVSSTETGVIFGNIVYETSNVL-ERTVVVLNDIHIDIMDYI 831
+P TLAP IKAN+KV+STE G+IFGNIVY+ S +R VVL+DIHIDIMDYI
Sbjct: 771 KPSPLTLAPHDFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYI 830
Query: 832 SPAVCTDAAFRTMWAEFEWENKVSL 856
PA CTDA FR MWAEFEWENKV++
Sbjct: 831 QPATCTDAEFRQMWAEFEWENKVTV 855
>UNIPROTKB|D2SW95 [details] [associations]
symbol:COPB1 "Coatomer subunit beta" species:9823 "Sus
scrofa" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005793
"endoplasmic reticulum-Golgi intermediate compartment"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
InterPro:IPR002553 InterPro:IPR011710 InterPro:IPR016024
InterPro:IPR016460 Pfam:PF01602 Pfam:PF07718 PIRSF:PIRSF005727
GO:GO:0005886 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 PROSITE:PS50077 GO:GO:0016192 GO:GO:0005198
GO:GO:0005793 GO:GO:0030126 PANTHER:PTHR10635 CTD:1315
EMBL:FJ865397 RefSeq:NP_001165837.1 UniGene:Ssc.2442
GeneID:100337660 KEGG:ssc:100337660 Uniprot:D2SW95
Length = 953
Score = 1925 (682.7 bits), Expect = 7.6e-199, P = 7.6e-199
Identities = 407/865 (47%), Positives = 567/865 (65%)
Query: 2 EKSCTLLIHFDKGT-PAIANEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVR 60
E C LI+ + P +K LE DV +K +A+KK I+++LNGE LP L +TI+R
Sbjct: 5 ENVCYTLINVPMDSEPPSEISLKNDLEKGDVKSKTEALKKVIIMILNGEKLPGLLMTIIR 64
Query: 61 YVLPSEDHTIQKLLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFL 120
+VLP +DHTI+KLLL++ EI+ KT GR+L EMIL+C R +LQHPNE+IRG TLRFL
Sbjct: 65 FVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGSTLRFL 124
Query: 121 CRLNETEIIEPLIPSVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLS 180
C+L E E++EPL+P++ L+HRH Y+RRNA+LA+ IY+ E L+ DAPE+I L
Sbjct: 125 CKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYR--NFEHLIPDAPELIHDFLV 182
Query: 181 TEQDPSAKRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXX 240
E+D S KRNAF+ML DQDRA++YL T +D+V +G++LQ+V++ELI KVC N
Sbjct: 183 NEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPSER 242
Query: 241 XXXXXXXXSLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVL 300
+LL + S AV YE AGTLV+LSSAPTAI+AAA Y L++ +SDNNVKLIVL
Sbjct: 243 ARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLIVL 302
Query: 301 DRLNELRS--SHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXX 358
DRL EL+ +H ++ DL+MD+LR L++P+L++R+KTL + L+L++ RN+
Sbjct: 303 DRLIELKEHPAHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVLKK 362
Query: 359 XXXXTQS-GELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVII 417
T + E E +YRQ+L++ +HSC+++FP++A+ V+ +LM+FL DSN A+A DV+
Sbjct: 363 EVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDSNEAAAADVLE 422
Query: 418 FVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQC 477
FVRE I+ LR+ I+ ++L+ F+ I++ ++ ALWI+GEYC + ++++ + +++
Sbjct: 423 FVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKEDIQSVMTEVRRS 482
Query: 478 LGELPFFSVSEEGEDTDSSKKXXXXXXXXXXXXRRPAVLADGTYATQSAASETAFSPPTI 537
LGE+P SE ++ K + V GTYATQSA S S PT
Sbjct: 483 LGEIPIVE-SEIKKEAGELKPEEEITVGPV----QKLVTKMGTYATQSALSS---SRPTK 534
Query: 538 VQGTLTSGNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRVEVNKASSQALLIMVSM 597
+ LR LL GDFF+ A +A TLTK+ LR + + N ++A+L+M ++
Sbjct: 535 KEEERPP--LRGFLLDGDFFVAASLATTLTKIALRYVALVQEKKRQNSFVAEAMLLMATI 592
Query: 598 LQLGQSPVLPHPIDNDSFDRIVVCIRLLCNTGDNIRKIWLQSCRQSFVKMLSEKQLRE-- 655
L LG+S PI +D DRI +C+++L + I+ + CRQS MLS K E
Sbjct: 593 LHLGKSSPPKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRQSLSHMLSAKLEEEKL 652
Query: 656 SEELKAKAQISHAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRATGEFV-KEGDD--A 712
S++ +++ + QPDD I F L ++ M+ E D+ Q L A G KE D A
Sbjct: 653 SQKKESEKRNVTVQPDDPISFMQLTAKNEMNCKE--DQFQLSLLAAMGNTQRKEAADPLA 710
Query: 713 NKLNRILQLTGFSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVE 772
+KLN++ QLTGFSDPVYAEAYV V+ YDIVLDV V+N+T +TLQN LELAT+GDLKLVE
Sbjct: 711 SKLNKVTQLTGFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVE 770
Query: 773 RPQNYTLAPESSKQIKANIKVSSTETGVIFGNIVYETSNVL-ERTVVVLNDIHIDIMDYI 831
+P TLAP IKAN+KV+STE G+IFGNIVY+ S +R VVL+DIHIDIMDYI
Sbjct: 771 KPSPLTLAPHDFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYI 830
Query: 832 SPAVCTDAAFRTMWAEFEWENKVSL 856
PA CTDA FR MWAEFEWENKV++
Sbjct: 831 QPATCTDAEFRQMWAEFEWENKVTV 855
>ZFIN|ZDB-GENE-030219-38 [details] [associations]
symbol:copb1 "coatomer protein complex, subunit beta
1" species:7955 "Danio rerio" [GO:0030117 "membrane coat"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0030903
"notochord development" evidence=IMP] InterPro:IPR002553
InterPro:IPR011710 InterPro:IPR016024 InterPro:IPR016460
Pfam:PF01602 Pfam:PF07718 PIRSF:PIRSF005727 ZFIN:ZDB-GENE-030219-38
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0016192 GO:GO:0005198 eggNOG:COG5096
GO:GO:0030126 GO:GO:0030903 HOGENOM:HOG000207417 PANTHER:PTHR10635
CTD:1315 GeneTree:ENSGT00390000005270 HOVERGEN:HBG005380
OMA:DFEWENK OrthoDB:EOG4KPT94 EMBL:AY294010 EMBL:BC081657
IPI:IPI00639577 RefSeq:NP_001002013.1 UniGene:Dr.77150
ProteinModelPortal:Q66HV4 STRING:Q66HV4 PRIDE:Q66HV4
Ensembl:ENSDART00000079042 GeneID:338138 KEGG:dre:338138
InParanoid:Q6JWU8 NextBio:20812553 Bgee:Q66HV4 Uniprot:Q66HV4
Length = 953
Score = 1888 (669.7 bits), Expect = 6.3e-195, P = 6.3e-195
Identities = 399/868 (45%), Positives = 568/868 (65%)
Query: 2 EKSCTLLIHFDKGT-PAIANEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVR 60
E C LI+ + P +K LE ++ AK +A+KK I+++LNGE LP L +TI+R
Sbjct: 5 ENVCYTLINVTNDSEPPSEVSLKTDLEKGEIKAKTEALKKVIIMILNGEKLPGLLMTIIR 64
Query: 61 YVLPSEDHTIQKLLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFL 120
+VLP +DHTI+KLLL++ EI+ KT G++L EMIL+C R +LQHPNE+IRG TLRFL
Sbjct: 65 FVLPLQDHTIKKLLLVFWEIVPKTTPDGKLLQEMILVCDAYRKDLQHPNEFIRGSTLRFL 124
Query: 121 CRLNETEIIEPLIPSVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLS 180
C+L E+E++EPL+P++ L+HRH Y+RRNA+LA+ IY+ E L+ DAPE+I L
Sbjct: 125 CKLKESELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYR--NFEHLIPDAPELIHDFLV 182
Query: 181 TEQDPSAKRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXX 240
E+D S KRNAF+ML DQDRA++YL T +D+V +G++LQ+V++ELI KVC N
Sbjct: 183 NEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVHTFGDILQLVIVELIYKVCHANPSER 242
Query: 241 XXXXXXXXSLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVL 300
+LL + S AV YE AGTLV+LSSAPTAI+AAA Y L++ +SDNNVKLIVL
Sbjct: 243 ARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLIVL 302
Query: 301 DRLNELRS--SHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXX 358
DRL EL+ +H ++ DL+MD+LR L +P+L++R+KTL + L+L++ RN+
Sbjct: 303 DRLIELKEHPTHERVLQDLVMDILRVLTTPDLEVRKKTLQLALDLVSSRNVEELVIVLKK 362
Query: 359 XXXXTQS-GELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVII 417
T + E E +YRQ+L++ +HSC+++FP++A+ V+ +LM+FL D+N A+A DV+
Sbjct: 363 EVIKTNNVTEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDTNEAAAADVLE 422
Query: 418 FVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQC 477
FVRE I+ LR II ++L+ F+ I+ ++ ALWI+GEYC + ++++ + +++
Sbjct: 423 FVREAIQRFDNLRPLIIEKMLEVFHAIKTVKIYRGALWILGEYCSTKEDIQSVMTEVRRS 482
Query: 478 LGELPFFSVSEEGEDTDSSKKXXXXXXXXXXXXRRPAVLAD-GTYATQSAASETAFSPPT 536
LGE+P +E ++ K P ++ + GTY TQSA S S P+
Sbjct: 483 LGEIPIVE-NELKKEAGEVKPEEEVTAAPA-----PKLVTEMGTYVTQSALST---SRPS 533
Query: 537 IVQGTLTSGNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRVEVNKASSQALLIMVS 596
+ LR L+ GDF++ A +A TLTK+ LR + + N ++A+LIM +
Sbjct: 534 KKEEDRPP--LRGFLMDGDFYVAASLATTLTKVALRYVALAEDKRRQNSFVAEAMLIMAT 591
Query: 597 MLQLGQSPVLPHPIDNDSFDRIVVCIRLLCNTGDNIRKIWLQSCRQSFVKMLS----EKQ 652
+L LG+S + PI +D DRI +C+++L + I+ + CR+S ML+ E++
Sbjct: 592 VLHLGKSSLPKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRRSLSHMLAVRLEEEK 651
Query: 653 LRESEELKAKAQISHAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRATGEFV-KEGDD 711
L + +E + K ++ Q DD I F L ++ M+ E D+ Q L A G KE D
Sbjct: 652 LSQKKESE-KRNVT-VQADDPISFMQLTAKNEMASKE--DQFQLSLLAAMGNTQRKEATD 707
Query: 712 --ANKLNRILQLTGFSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLK 769
A+KLN++ QLTGFSDPVYAEAYV V+ YDIVLDV V+N+T +TLQN LELAT+GDLK
Sbjct: 708 PLASKLNKVTQLTGFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLK 767
Query: 770 LVERPQNYTLAPESSKQIKANIKVSSTETGVIFGNIVYETSNVL-ERTVVVLNDIHIDIM 828
LVE+P TLAP IKAN+KV+STE G+IFGNIVY+ S +R VVL+DIHIDIM
Sbjct: 768 LVEKPSPLTLAPHDFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIM 827
Query: 829 DYISPAVCTDAAFRTMWAEFEWENKVSL 856
DYI PA CTDA FR MWAEFEWENKV++
Sbjct: 828 DYIQPASCTDAEFRQMWAEFEWENKVTV 855
>FB|FBgn0008635 [details] [associations]
symbol:betaCop "beta-coatomer protein" species:7227
"Drosophila melanogaster" [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=ISS;NAS] [GO:0030126 "COPI vesicle coat"
evidence=ISS;NAS] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006911 "phagocytosis, engulfment" evidence=IMP]
[GO:0010883 "regulation of lipid storage" evidence=IDA] [GO:0000902
"cell morphogenesis" evidence=IMP] InterPro:IPR002553
InterPro:IPR011710 InterPro:IPR016024 InterPro:IPR016460
Pfam:PF01602 Pfam:PF07718 PIRSF:PIRSF005727 GO:GO:0005794
GO:GO:0006886 GO:GO:0006911 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 PROSITE:PS50077 GO:GO:0005198 EMBL:AE014298
GO:GO:0000902 eggNOG:COG5096 GO:GO:0030126 GO:GO:0010883
PANTHER:PTHR10635 GeneTree:ENSGT00390000005270 OMA:DFEWENK
EMBL:L31852 EMBL:AF145656 RefSeq:NP_523400.1 UniGene:Dm.2883
ProteinModelPortal:P45437 SMR:P45437 DIP:DIP-23112N IntAct:P45437
MINT:MINT-846029 STRING:P45437 PaxDb:P45437
EnsemblMetazoa:FBtr0074576 GeneID:32820 KEGG:dme:Dmel_CG6223
CTD:32820 FlyBase:FBgn0008635 InParanoid:P45437 OrthoDB:EOG4MGQP7
PhylomeDB:P45437 GenomeRNAi:32820 NextBio:780558 Bgee:P45437
GermOnline:CG6223 Uniprot:P45437
Length = 964
Score = 1881 (667.2 bits), Expect = 3.5e-194, P = 3.5e-194
Identities = 402/861 (46%), Positives = 552/861 (64%)
Query: 18 IANE--IKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLL 75
+ NE +K LE D K++ +K+ I LLLNGE P L +TI+R+VLP ++HTI+KLLL
Sbjct: 18 VTNEMQLKRDLEKGDTNVKIETLKRVIKLLLNGERYPGLIMTIIRFVLPVQNHTIKKLLL 77
Query: 76 LYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPS 135
++ EI+ KT A G++L EMIL+C R +LQHPNE++RG TLRFLC+L E E++EPL+P+
Sbjct: 78 IFWEIVPKTSADGKLLQEMILVCDAYRKDLQHPNEFLRGSTLRFLCKLKEPELLEPLMPA 137
Query: 136 VLQNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLML 195
+ L HRH Y+RRNA+LA+ IYK + L+ D PE+I L T+QD S KRNAFLML
Sbjct: 138 IRACLDHRHSYVRRNAVLAIFTIYK--NFDWLVPDGPELIASFLDTQQDMSCKRNAFLML 195
Query: 196 FTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXXXXXSLLNAPS 255
DQ+RA+NYL + +D+V +G++LQ+V++ELI KVC N +LLN+ S
Sbjct: 196 LHADQERALNYLASCIDQVHTFGDILQLVIVELIYKVCHANPAERSRFIRCIYNLLNSSS 255
Query: 256 TAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLDRLNELRSSH--RDI 313
AV YE AGTL++LS APTAI+AAA+ Y +L++ +SDNNVKLIVLDRL ++ +
Sbjct: 256 NAVRYESAGTLITLSLAPTAIKAAASCYIELVVKESDNNVKLIVLDRLVAMKEHEGMEKV 315
Query: 314 MVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQSGELEKNGE 373
M DL+MDVLR L +P++++RRKTL + L+L+ RNI T + E E G+
Sbjct: 316 MQDLVMDVLRVLAAPDIEVRRKTLALALDLVYSRNIGEMVLVLKKEVAKTHNVEHEDTGK 375
Query: 374 YRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVREIIEMNPKLRVSI 433
YRQ+L++ +H+C+IKFP+VA+ V+ +L++FL D+N +A DV+IF+RE I+ P LR I
Sbjct: 376 YRQLLVRTLHTCSIKFPDVAANVIPVLVEFLSDTNELAAADVLIFIREAIQKFPALRALI 435
Query: 434 ITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCLGELPFFSVSEE---G 490
I L++ F QI+++++ A+WI+GEY + S++ IA I+Q LGE+P + G
Sbjct: 436 IEHLIEAFPQIKSSKIHRAAVWILGEYVEG-SQILEVIAVIQQTLGEVPMVEAEQRRLAG 494
Query: 491 EDTDSSKKXXXXXXXXXXXXRRPA---------VLADGTYATQSAASETAFSPPTIVQGT 541
+ T+ K+ V +DGTYATQSA S +P V
Sbjct: 495 DQTEEQKQQQGSAGGNAAGSAAEGSGSGNASNKVTSDGTYATQSAYS---LAP---VAKA 548
Query: 542 LTSGNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRVEVNKASSQALLIMVSMLQLG 601
LR L+ GDFF+GA ++ TLTKL LR E++ N+ ++Q +LIM S+L LG
Sbjct: 549 EKRPPLRQYLMDGDFFIGAALSATLTKLALRYAELETEARAQNRLTTQVMLIMSSILHLG 608
Query: 602 QSPVLPHPIDNDSFDRIVVCIRLLCNTGDNIRKIWLQSCRQSFVKMLSEKQLRESEELKA 661
+S PI ND DRI VC+R L ++ CR++ KML + + LK
Sbjct: 609 KSGFPSKPITNDDTDRIFVCLRTLSERTPEAISVFTLYCREALGKMLDAQHDEDQRMLKE 668
Query: 662 KAQIS-HAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRA-TGEFVKEGDDA----NKL 715
K + + QPDD + F L + + +QL E+ + L +A G + D +KL
Sbjct: 669 KQKATAKVQPDDPVLFAQLSNGRD-NQLG-ENVFESSLNQALAGSKNAQLSDVASPNSKL 726
Query: 716 NRILQLTGFSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVERPQ 775
N++ QLTGFSDPVYAEAYV V+ YDIVLDV ++N+T +TLQN LELAT+GDLKLVERP
Sbjct: 727 NKVTQLTGFSDPVYAEAYVNVNQYDIVLDVLIVNQTNDTLQNCTLELATLGDLKLVERPH 786
Query: 776 NYTLAPESSKQIKANIKVSSTETGVIFGNIVYETSNVLERTVVVLNDIHIDIMDYISPAV 835
LAP IKAN+KVSSTE G+IFGNIVYET+ L VVVLN IHIDIMDYI PA
Sbjct: 787 PVVLAPHDFCNIKANVKVSSTENGIIFGNIVYETA--LNTNVVVLNTIHIDIMDYIIPAS 844
Query: 836 CTDAAFRTMWAEFEWENKVSL 856
CTD FR MW +FEWENKV++
Sbjct: 845 CTDTEFRQMWQDFEWENKVTV 865
>ASPGD|ASPL0000052724 [details] [associations]
symbol:AN1177 species:162425 "Emericella nidulans"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR002553 InterPro:IPR011710
InterPro:IPR016024 InterPro:IPR016460 Pfam:PF01602 Pfam:PF07718
PIRSF:PIRSF005727 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 EMBL:AACD01000016 EMBL:BN001308
GO:GO:0005198 eggNOG:COG5096 GO:GO:0030126 HOGENOM:HOG000207417
PANTHER:PTHR10635 OMA:DFEWENK OrthoDB:EOG483HCN RefSeq:XP_658781.1
ProteinModelPortal:Q5BE53 STRING:Q5BE53
EnsemblFungi:CADANIAT00001449 GeneID:2876954 KEGG:ani:AN1177.2
Uniprot:Q5BE53
Length = 950
Score = 1839 (652.4 bits), Expect = 9.8e-190, P = 9.8e-190
Identities = 378/854 (44%), Positives = 542/854 (63%)
Query: 8 LIHFDKGTPAIAN-EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSE 66
L+H D + E+K LE K+D M++ I ++LNG+ +PQL + I+R+V+PS+
Sbjct: 11 LVHMDNAADQPSQQELKLQLEKGTDETKLDTMRRIITIMLNGDPMPQLLMHIIRFVMPSK 70
Query: 67 DHTIQKLLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNET 126
++KLL Y EI K D+ G++ EMIL+C +RN+LQHPNEY+RG TLRFLC+L E
Sbjct: 71 SKPLKKLLYFYYEICPKHDSNGKLKQEMILVCNGIRNDLQHPNEYVRGNTLRFLCKLREP 130
Query: 127 EIIEPLIPSVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLSTEQDPS 186
E+IEPL+ S L HRH Y+R++A+ A+ +I++ E L+ DAPE+I+ L TE D +
Sbjct: 131 ELIEPLLSSARSCLDHRHAYVRKSAVWAISSIFQ--HSESLIPDAPELIQTFLETESDGT 188
Query: 187 AKRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXXX 246
KRNAF L + +A+ YL + D + ELLQ+ LE IRK N
Sbjct: 189 CKRNAFAALMSISHQKALEYLASTFDSIPNTDELLQLAELEFIRKDAVQNSQNKARYLRL 248
Query: 247 XXSLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLDRLNEL 306
LL+A ++ V+YE A +L +L+S P A++AAA +L + ++DNNVKLIVLDR+++L
Sbjct: 249 IFDLLDASTSTVVYEAATSLTALTSNPVAVKAAAGKLIELSIKEADNNVKLIVLDRVDQL 308
Query: 307 RSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQSG 366
R + ++ DL M++LR L+SP++D+RRK L I LE+++ +N+ T
Sbjct: 309 RIRNEGVLDDLTMEILRVLSSPDIDVRRKALGIALEMVSSKNVEEIVMLLKKELSKTVDE 368
Query: 367 ELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVREIIEMN 426
+ EKN EYRQ+LIQ+IH+CAIKF E+A++VV LLMDF+ D N SA+DVI FV+E++E
Sbjct: 369 QYEKNSEYRQLLIQSIHNCAIKFSEIAASVVDLLMDFIADFNNNSAVDVISFVKEVVEKF 428
Query: 427 PKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCLGELPFFSV 486
PKLR SI+ RL+ ++RA +V LW++GEY S++ I+ LGE+P +
Sbjct: 429 PKLRPSIVNRLVSTLSEVRAGKVYRGVLWVVGEYSLEESDIREAWKKIRASLGEIPILA- 487
Query: 487 SEEGEDTDSSKKXXXXXXXXXXXXRRPAVLADGTYATQSA-ASETAFSPPTIVQGTLTSG 545
SE+ + + P VLADGTYAT+SA S++A +
Sbjct: 488 SEQRLLEEVPEDTLPKEQINGHGKSAPKVLADGTYATESALTSQSAAAARLQAVKAAQKP 547
Query: 546 NLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRVEVNKASSQALLIMVSMLQLGQSPV 605
LR L+L GD++L V++ TLTKLV+R EV N ++A+LIM+S++++GQSP
Sbjct: 548 PLRQLILDGDYYLATVLSSTLTKLVMRHSEVSEDSARTNALRAEAMLIMISIIRVGQSPF 607
Query: 606 LPHPIDNDSFDRIVVCIRLLCNTGDN--IRKIWLQSCRQSFVKMLS-EKQLRESEELKAK 662
+ PID DS DRI+ C+R L + + +L+ R++F M+ E + R ++E K
Sbjct: 608 VAAPIDEDSVDRIMTCVRSLAEFSERKELETTFLEDTRKAFRAMVQVEDKKRAAKEAVEK 667
Query: 663 AQISHAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRATGEFVKEGDDANKLNRILQLT 722
A+ + Q DD I + S LE +E++ DL +ATG ++KL+R++QLT
Sbjct: 668 AKTA-VQIDDAIPIRQFAKK---SALEGAEEIELDLAKATGGDSAVETVSSKLSRVVQLT 723
Query: 723 GFSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVERPQNYTLAPE 782
GFSDPVYAEAYVTVH +DIVLDV ++N+T ETLQNL +E AT+GDLK+VERP + L P
Sbjct: 724 GFSDPVYAEAYVTVHQFDIVLDVLLVNQTLETLQNLSVEFATLGDLKVVERPTTHNLGPR 783
Query: 783 SSKQIKANIKVSSTETGVIFGNIVYETSNVLERTVVVLNDIHIDIMDYISPAVCTDAAFR 842
++A +KVSST+TGVIFGNIVY+ ++ E VV+LNDIH DIMDYI PA CT+ FR
Sbjct: 784 DFLNVQATVKVSSTDTGVIFGNIVYDGASSTETHVVILNDIHADIMDYIQPAHCTETQFR 843
Query: 843 TMWAEFEWENKVSL 856
TMW EFEWENKV++
Sbjct: 844 TMWTEFEWENKVNI 857
>DICTYBASE|DDB_G0284735 [details] [associations]
symbol:copB "coatomer protein complex beta subunit"
species:44689 "Dictyostelium discoideum" [GO:0048471 "perinuclear
region of cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IEA;IDA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0030117 "membrane coat" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR002553
InterPro:IPR011710 InterPro:IPR016024 InterPro:IPR016460
Pfam:PF01602 Pfam:PF07718 PIRSF:PIRSF005727 dictyBase:DDB_G0284735
GO:GO:0005794 GO:GO:0048471 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077
GenomeReviews:CM000153_GR GO:GO:0016192 GO:GO:0005198
EMBL:AAFI02000071 eggNOG:COG5096 GO:GO:0030126 PANTHER:PTHR10635
OMA:DFEWENK EMBL:AF247143 EMBL:U62960 RefSeq:XP_638375.1
ProteinModelPortal:Q23924 STRING:Q23924 PRIDE:Q23924
EnsemblProtists:DDB0191250 GeneID:8624744 KEGG:ddi:DDB_G0284735
ProtClustDB:CLSZ2430217 Uniprot:Q23924
Length = 912
Score = 1221 (434.9 bits), Expect = 3.5e-189, Sum P(2) = 3.5e-189
Identities = 236/481 (49%), Positives = 336/481 (69%)
Query: 1 MEKSCTLLIHFDKGTPAIANEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVR 60
+EK CT+LI++DKG P NE K+ E K++ +KK I+ +NGE +PQL + I+
Sbjct: 10 IEKPCTILINYDKGDPPQVNEFKQNFEHGTTEQKIETLKKVILYTINGEPIPQLLMPIIL 69
Query: 61 YVLPSEDHTIQKLLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFL 120
YV+PS DHTI+KLLL+Y E+I+KT G++ EMIL+C +L N+L HPNE++RG TLRFL
Sbjct: 70 YVMPSNDHTIKKLLLIYWEVIEKTHL-GKLKSEMILVCNSLLNDLNHPNEFVRGSTLRFL 128
Query: 121 CRLNETEIIEPLIPSVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLS 180
C+L E E++EPL+PSV NL++RH Y RRNA+LA+ IY + L+ DAPE+I L
Sbjct: 129 CKLREAEVLEPLVPSVRSNLENRHAYCRRNAVLAIYNIYS--HFDYLIPDAPELIYNFLL 186
Query: 181 TEQDPSAKRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXX 240
E+D S KRNAF+MLF C ++A+ YL + +D V +G++LQ +V+ELIRKVC+T+
Sbjct: 187 QEKDASCKRNAFIMLFNCAPEKAVEYLSSVLDEVPSFGDMLQFIVVELIRKVCKTSPSER 246
Query: 241 XXXXXXXXSLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVL 300
+LLN+ S AV YE AGTL+SLSSAPTA+R AA+ Y LL ++SDNNVK+IVL
Sbjct: 247 SKYIKCIFTLLNSSSPAVKYESAGTLLSLSSAPTAVRGAASAYIDLLCNESDNNVKMIVL 306
Query: 301 DRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXX 360
D+L E++ +H IM +L+MD+LRAL+SPN+DI +K L+IVL+ +TP+NI+
Sbjct: 307 DKLIEIKKNHSKIMEELVMDILRALSSPNIDICKKVLNIVLDSVTPKNIDEIILFLKKEI 366
Query: 361 XXTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVR 420
TQS E +K EYR +LI+ IH ++K+PEV VV LLM++LGDS + SA+DV+IF+R
Sbjct: 367 NKTQSKEFDKGLEYRHILIRTIHVSSLKYPEVLGNVVPLLMEYLGDSYLPSAVDVVIFLR 426
Query: 421 EIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCLGE 480
E++E P LR II +L++N I+ ++V A+W+I EY L +++ + +I L E
Sbjct: 427 EVVETYPSLRELIIKKLIENLSSIKVSKVYRVAVWVIAEYVTCLEDLQYAMTSITNDLEE 486
Query: 481 L 481
L
Sbjct: 487 L 487
Score = 635 (228.6 bits), Expect = 3.5e-189, Sum P(2) = 3.5e-189
Identities = 125/315 (39%), Positives = 199/315 (63%)
Query: 546 NLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRVEVNKASSQALLIMVSMLQLGQSPV 605
+++ L+ GD++L + ++ +LTKL R E++ + NK +Q ++I+ ++ L ++
Sbjct: 510 SIQKLIADGDWYLASCISSSLTKLFFRAEQLNIDNADSNKLKAQVMMIISVLINLSKASQ 569
Query: 606 LPHPIDNDSFDRIVVCIRLLCNTGDNIRKIWLQSCRQSFVKMLSEKQLRESEELKAKAQI 665
+ +++R++ CI++L ++ I+KIWLQ CR SF L +++SE K +
Sbjct: 570 VS--TSKSAYERMLSCIQVLIDSNATIKKIWLQDCRDSFANYLKYLLIKQSENKKKTEKE 627
Query: 666 SHAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRATGEFVKEGDDANKLNRILQLTGFS 725
+P+++I+ LKS+K ++ ED DL +A G + D N+ ++I QL+GFS
Sbjct: 628 VLVKPNNIINIRQLKSKKAFGPVDTED----DLIKAVGNTGEANKDQNEYSKISQLSGFS 683
Query: 726 DPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVERPQNYTLAPESSK 785
DP+Y EAYV VH YDIVLD++V N+T +TLQN+ LEL T+GDLK+ ER +T+AP
Sbjct: 684 DPIYVEAYVRVHQYDIVLDISVFNQTNDTLQNVTLELVTLGDLKICERVPPFTMAPREKT 743
Query: 786 QIKANIKVSSTETGVIFGNIVYE----TSNVLERTVVVLNDIHIDIMDYISPA--VCTDA 839
KA+IKVSST+ GVI G I ++ S++ ++ V+LN++HID++DYI PA TD
Sbjct: 744 SAKASIKVSSTDNGVIMGTIAFDIAGSVSSMSDKNCVILNELHIDVIDYILPANHQYTDV 803
Query: 840 AFRTMWAEFEWENKV 854
FR W EFEWENK+
Sbjct: 804 LFRNHWLEFEWENKI 818
>WB|WBGene00021292 [details] [associations]
symbol:copb-1 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0032940 "secretion by cell"
evidence=IMP] InterPro:IPR002553 InterPro:IPR011710
InterPro:IPR016024 InterPro:IPR016460 Pfam:PF01602 Pfam:PF07718
PIRSF:PIRSF005727 GO:GO:0008340 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0032940 GO:GO:0016192
GO:GO:0005198 GO:GO:0000003 eggNOG:COG5096 GO:GO:0030126
HOGENOM:HOG000207417 PANTHER:PTHR10635 GeneTree:ENSGT00390000005270
OMA:DFEWENK EMBL:FO080207 PIR:T33907 RefSeq:NP_494441.1
ProteinModelPortal:Q9TYL9 SMR:Q9TYL9 STRING:Q9TYL9 PaxDb:Q9TYL9
EnsemblMetazoa:Y25C1A.5 GeneID:173656 KEGG:cel:CELE_Y25C1A.5
UCSC:Y25C1A.5.1 CTD:173656 WormBase:Y25C1A.5 InParanoid:Q9TYL9
NextBio:880553 Uniprot:Q9TYL9
Length = 971
Score = 1657 (588.4 bits), Expect = 1.9e-170, P = 1.9e-170
Identities = 360/873 (41%), Positives = 534/873 (61%)
Query: 2 EKSCTLLIHF--DKGTPAIANEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQ-LFITI 58
E+ C LIH D P+ A ++KE E +++A+KK I ++LNGE Q + + +
Sbjct: 5 EQPCYTLIHVPSDAELPSEA-QLKEKFEKGGDKERIEALKKLIYMILNGEKTSQSMLMYV 63
Query: 59 VRYVLPSEDHTIQKLLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLR 118
+R+ LPS +HT++K+LL++ E + KTD+ G++L EMIL+C R +LQHPNE++RG TLR
Sbjct: 64 IRFCLPSNEHTLKKVLLIFWECVPKTDSNGKLLHEMILVCDAYRKDLQHPNEFVRGSTLR 123
Query: 119 FLCRLNETEIIEPLIPSVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKV 178
FLC+L E E++EPL+P++ L+HRH Y+RRNA+ A+ IYK E L+ DAPE++ +
Sbjct: 124 FLCKLREPELLEPLMPAIRACLEHRHSYVRRNAVCAIFTIYK--NFEFLIPDAPELVTEY 181
Query: 179 LSTEQDPSAKRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXX 238
L EQD S KRNAF+ML DQ RA++YL +D+V +G++LQ+V++ELI KVC N
Sbjct: 182 LEQEQDASCKRNAFMMLLHVDQARALDYLSGCIDQVGSFGDILQLVIVELIYKVCHNNPN 241
Query: 239 XXXXXXXXXXSLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLI 298
+LL + S AV YE AGTLV+LS+ P A++AAA+ Y L++ +SDNNVKLI
Sbjct: 242 EASRFIRCVYNLLQSSSPAVRYEAAGTLVTLSNVPAAVKAAASAYIDLIVKESDNNVKLI 301
Query: 299 VLDRLNELR--SSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXX 356
VLDRL LR SS+ I+ L+MD+LR L+SP L++R+KTL + L+L++ RN+
Sbjct: 302 VLDRLVALRGSSSNEKILQGLVMDILRVLSSPGLEVRKKTLSLALDLVSSRNVEDMVMFL 361
Query: 357 XXXXXXTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVI 416
T + ++NG+YRQ L++ +H+ IKFP+VAST+V +LM+FL D+N ++ V+
Sbjct: 362 KKEINKTATESNDENGKYRQELVKTLHAATIKFPDVASTIVPVLMEFLSDTNEKASSYVL 421
Query: 417 IFVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQ 476
FVRE + P L+ +I+ L + I++ + ALWI+ YC++ ++ + +K
Sbjct: 422 QFVREAVHKLPNLKNAILGALREGIPFIQSPTIFMSALWILATYCEADGALDV-LKLVKN 480
Query: 477 CLGELPFFSVSEEGEDTDSSKKXXXXXXXXXXXXRRPAVLADGTYATQSAASETAFSPPT 536
LGELP G++ ++ ++P V ADGTYATQ+A S T +
Sbjct: 481 SLGELPLVDSELSGQEEQKPEEQQPEQQQK----QKPKVTADGTYATQTALSSTVTTSKK 536
Query: 537 IVQGTLTSGNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRVE-VNKASSQALLIMV 595
+ L R LL G+FFLGA +A LTKL + E+ + E N+ ++ +LI+
Sbjct: 537 NEKPPL-----RRFLLDGEFFLGASLATVLTKLAQQFTELNGAASERANRFRAECMLILS 591
Query: 596 SMLQLGQSPV-LPHP-IDNDSFDRIVVCIRLLCNTGDNIRKIWLQSCRQSFVKMLSEKQL 653
S++ L +S + + H ++ D DR+ I++L + + + C++S ML K +
Sbjct: 592 SIIHLAKSGLCIVHQQVNEDDLDRMGATIKILAQGIPGLDEQYGDDCKKSLELMLGAKSI 651
Query: 654 RESEELKAKAQISHAQPDDLIDFYHLKSRKGMSQLELEDEVQDD------LKRATGEFVK 707
+ K + A DF + +QL Q + L +A G K
Sbjct: 652 SRLDVTTEKMASTTAAGYRSKDFVEIDKTINFTQLSARSNQQGENLFDLSLSQALGTAPK 711
Query: 708 --EGD-DANKLNRILQLTGFSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELAT 764
+ D ++KL +++QL GFSDP+YAEAYV V+ YDIVLDV ++N+T +TLQN+ LELAT
Sbjct: 712 AQKFDFSSSKLGKVIQLAGFSDPIYAEAYVNVNQYDIVLDVLIVNQTSDTLQNVSLELAT 771
Query: 765 MGDLKLVERPQNYTLAPESSKQIKANIKVSSTETGVIFGNIVYE-TSNVLERTVVVLNDI 823
+GDLKLV++P TLAP IKA +KV+STE GVIF I Y+ T + +R V L DI
Sbjct: 772 VGDLKLVDKPTPVTLAPNDFSNIKATVKVASTENGVIFSTISYDVTGSTSDRNCVYLQDI 831
Query: 824 HIDIMDYISPAVCTDAAFRTMWAEFEWENKVSL 856
IDIMDYI P TD FRTMW++FEWENKV++
Sbjct: 832 KIDIMDYIVPGNVTDTEFRTMWSDFEWENKVNV 864
>CGD|CAL0000129 [details] [associations]
symbol:SEC26 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0030126 "COPI vesicle coat"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=IEA]
InterPro:IPR002553 InterPro:IPR011710 InterPro:IPR016024
InterPro:IPR016460 Pfam:PF01602 Pfam:PF07718 PIRSF:PIRSF005727
CGD:CAL0000129 GO:GO:0005886 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192 GO:GO:0005198
eggNOG:COG5096 GO:GO:0030126 EMBL:AACQ01000055 EMBL:AACQ01000054
HOGENOM:HOG000207417 PANTHER:PTHR10635 RefSeq:XP_717391.1
RefSeq:XP_717483.1 ProteinModelPortal:Q5A6M6 STRING:Q5A6M6
GeneID:3640891 GeneID:3641005 KEGG:cal:CaO19.528
KEGG:cal:CaO19.8161 Uniprot:Q5A6M6
Length = 952
Score = 1634 (580.3 bits), Expect = 5.2e-168, P = 5.2e-168
Identities = 339/858 (39%), Positives = 528/858 (61%)
Query: 6 TLLIHFDKGTPAIANEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPS 65
TL+ + T NE K LE KVD MKK ++ +LNG+ LP L + I+R+V+PS
Sbjct: 7 TLIYEPNTATKVSVNEFKNLLEKGKDDVKVDTMKKILITILNGDPLPDLLMHIIRFVMPS 66
Query: 66 EDHTIQKLLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNE 125
+ ++KLL Y E+ K D G++ EMIL+C ++ +LQHPNEYIRG TLR+L +L E
Sbjct: 67 RNKELKKLLYHYWEVCPKMDESGKMRHEMILVCNAIQRDLQHPNEYIRGNTLRYLTKLKE 126
Query: 126 TEIIEPLIPSVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLSTEQDP 185
E++E L+P+V Q L+HRH Y+R+NA+ A+ +I+K+ + L DA E+I + L E D
Sbjct: 127 PELLETLVPNVRQCLEHRHAYVRKNAVFALWSIHKV--SDHLAPDADELIYRFLYEENDS 184
Query: 186 SAKRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXX 245
KRNAF+ L +++ A+ Y+ ++ + L+Q+ +E I+K N
Sbjct: 185 VCKRNAFVCLGDLNREAALQYIQDNISVIETLDPLIQLAFIEFIKKDSIQNPALKQQYAQ 244
Query: 246 XXXSLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLDRLNE 305
++ + S V+YE A TL L+S P +I A N + +L +SDNNVK+I L+R+N+
Sbjct: 245 LMTEIIESSSNVVMYEAANTLTVLTSNPQSILLAGNKFVELATRESDNNVKIITLERINQ 304
Query: 306 LRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQS 365
L H ++ DL +++LR L+S +LD+++K LD+ L+ IT RN+ T
Sbjct: 305 LHKQHPGVLQDLSLEILRVLSSQDLDVKKKALDVTLQFITTRNVEDVVKLLKKELQSTAL 364
Query: 366 GELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVREIIEM 425
+KN +YRQ+LI AIH AIKF EVA+ V+ LL+D + D N +A +VI FV+E++E
Sbjct: 365 SNDDKNADYRQLLINAIHQLAIKFVEVAANVIDLLLDSIADLNTTAAYEVITFVKEVVEK 424
Query: 426 NPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCLGELPFFS 485
P LR +I+ RL+ +++ +V ALW+IGEY S ++ I+ +GE+P +
Sbjct: 425 FPDLRDAILRRLILALPHVKSGKVFRGALWVIGEYALEESLIQESWKYIRGSIGEVPIIA 484
Query: 486 VSEEGEDTDSSKKXXXXXXXXXXXXRR--PAVLADGTYATQSA-ASETAFSPPTIVQGTL 542
+ + D +++ RR P VL DGTYAT+SA SET S + +
Sbjct: 485 SELKSKKRDDTEESQEEETEYDGKPRRKGPVVLPDGTYATESALTSETTDS---LESDSK 541
Query: 543 TSGNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRVEV-NKASSQALLIMVSMLQLG 601
T +R +L GDF+LGAV+A TL KL+LRL+ ++ ++ ++ N ++ALLIMVS+L++G
Sbjct: 542 TP--IRKQILAGDFYLGAVLASTLVKLILRLQSLKQTQEKILNGLKAEALLIMVSILRVG 599
Query: 602 QSPVLPHPIDNDSFDRIVVCIRLLCNTGD--NIRKIWLQSCRQSFVKMLSEKQLRESEEL 659
+S ++ ID DS DRI+ I++L + D I+ +L+ + +F ++ +L+++E L
Sbjct: 600 ESSLVSKKIDEDSADRILSYIKILNDEEDLQEIKTSFLEDTKDAFKAQINNAELKKAEAL 659
Query: 660 KAKAQISHAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRATGEF-VKEGDDANKLNRI 718
+ Q DD I F L S+ + DD+ A+G +K+ + +++LN+I
Sbjct: 660 AKDLHDNAEQIDDAIVFRQLDKDNKKSKASV-----DDVAAASGSNELKKENLSSRLNKI 714
Query: 719 LQLTGFSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVERPQNYT 778
+QLTGFSDP+YAEA+V VH YD+VLDV ++N+T TL+NL +E AT+GDLK+V++P
Sbjct: 715 IQLTGFSDPIYAEAFVKVHQYDVVLDVLLVNQTTTTLRNLSVEFATLGDLKVVDKPTTAN 774
Query: 779 LAPESSKQIKANIKVSSTETGVIFGNIVYETSNVLERTVVVLNDIHIDIMDYISPAVCTD 838
+ P +++ IKV+S +TGVIFGNIVY+ + + +V+LND+H+DIMDYI PA C++
Sbjct: 775 IGPHGFYKVQTTIKVTSADTGVIFGNIVYDGQHSDDSRIVILNDVHVDIMDYIKPATCSE 834
Query: 839 AAFRTMWAEFEWENKVSL 856
+ FR MW EFEWENK+++
Sbjct: 835 SQFRKMWNEFEWENKITI 852
>UNIPROTKB|Q5A6M6 [details] [associations]
symbol:SEC26 "Coatomer subunit beta" species:237561
"Candida albicans SC5314" [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR002553 InterPro:IPR011710
InterPro:IPR016024 InterPro:IPR016460 Pfam:PF01602 Pfam:PF07718
PIRSF:PIRSF005727 CGD:CAL0000129 GO:GO:0005886 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0005198 eggNOG:COG5096 GO:GO:0030126 EMBL:AACQ01000055
EMBL:AACQ01000054 HOGENOM:HOG000207417 PANTHER:PTHR10635
RefSeq:XP_717391.1 RefSeq:XP_717483.1 ProteinModelPortal:Q5A6M6
STRING:Q5A6M6 GeneID:3640891 GeneID:3641005 KEGG:cal:CaO19.528
KEGG:cal:CaO19.8161 Uniprot:Q5A6M6
Length = 952
Score = 1634 (580.3 bits), Expect = 5.2e-168, P = 5.2e-168
Identities = 339/858 (39%), Positives = 528/858 (61%)
Query: 6 TLLIHFDKGTPAIANEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPS 65
TL+ + T NE K LE KVD MKK ++ +LNG+ LP L + I+R+V+PS
Sbjct: 7 TLIYEPNTATKVSVNEFKNLLEKGKDDVKVDTMKKILITILNGDPLPDLLMHIIRFVMPS 66
Query: 66 EDHTIQKLLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNE 125
+ ++KLL Y E+ K D G++ EMIL+C ++ +LQHPNEYIRG TLR+L +L E
Sbjct: 67 RNKELKKLLYHYWEVCPKMDESGKMRHEMILVCNAIQRDLQHPNEYIRGNTLRYLTKLKE 126
Query: 126 TEIIEPLIPSVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLSTEQDP 185
E++E L+P+V Q L+HRH Y+R+NA+ A+ +I+K+ + L DA E+I + L E D
Sbjct: 127 PELLETLVPNVRQCLEHRHAYVRKNAVFALWSIHKV--SDHLAPDADELIYRFLYEENDS 184
Query: 186 SAKRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXX 245
KRNAF+ L +++ A+ Y+ ++ + L+Q+ +E I+K N
Sbjct: 185 VCKRNAFVCLGDLNREAALQYIQDNISVIETLDPLIQLAFIEFIKKDSIQNPALKQQYAQ 244
Query: 246 XXXSLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLDRLNE 305
++ + S V+YE A TL L+S P +I A N + +L +SDNNVK+I L+R+N+
Sbjct: 245 LMTEIIESSSNVVMYEAANTLTVLTSNPQSILLAGNKFVELATRESDNNVKIITLERINQ 304
Query: 306 LRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQS 365
L H ++ DL +++LR L+S +LD+++K LD+ L+ IT RN+ T
Sbjct: 305 LHKQHPGVLQDLSLEILRVLSSQDLDVKKKALDVTLQFITTRNVEDVVKLLKKELQSTAL 364
Query: 366 GELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVREIIEM 425
+KN +YRQ+LI AIH AIKF EVA+ V+ LL+D + D N +A +VI FV+E++E
Sbjct: 365 SNDDKNADYRQLLINAIHQLAIKFVEVAANVIDLLLDSIADLNTTAAYEVITFVKEVVEK 424
Query: 426 NPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCLGELPFFS 485
P LR +I+ RL+ +++ +V ALW+IGEY S ++ I+ +GE+P +
Sbjct: 425 FPDLRDAILRRLILALPHVKSGKVFRGALWVIGEYALEESLIQESWKYIRGSIGEVPIIA 484
Query: 486 VSEEGEDTDSSKKXXXXXXXXXXXXRR--PAVLADGTYATQSA-ASETAFSPPTIVQGTL 542
+ + D +++ RR P VL DGTYAT+SA SET S + +
Sbjct: 485 SELKSKKRDDTEESQEEETEYDGKPRRKGPVVLPDGTYATESALTSETTDS---LESDSK 541
Query: 543 TSGNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRVEV-NKASSQALLIMVSMLQLG 601
T +R +L GDF+LGAV+A TL KL+LRL+ ++ ++ ++ N ++ALLIMVS+L++G
Sbjct: 542 TP--IRKQILAGDFYLGAVLASTLVKLILRLQSLKQTQEKILNGLKAEALLIMVSILRVG 599
Query: 602 QSPVLPHPIDNDSFDRIVVCIRLLCNTGD--NIRKIWLQSCRQSFVKMLSEKQLRESEEL 659
+S ++ ID DS DRI+ I++L + D I+ +L+ + +F ++ +L+++E L
Sbjct: 600 ESSLVSKKIDEDSADRILSYIKILNDEEDLQEIKTSFLEDTKDAFKAQINNAELKKAEAL 659
Query: 660 KAKAQISHAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRATGEF-VKEGDDANKLNRI 718
+ Q DD I F L S+ + DD+ A+G +K+ + +++LN+I
Sbjct: 660 AKDLHDNAEQIDDAIVFRQLDKDNKKSKASV-----DDVAAASGSNELKKENLSSRLNKI 714
Query: 719 LQLTGFSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVERPQNYT 778
+QLTGFSDP+YAEA+V VH YD+VLDV ++N+T TL+NL +E AT+GDLK+V++P
Sbjct: 715 IQLTGFSDPIYAEAFVKVHQYDVVLDVLLVNQTTTTLRNLSVEFATLGDLKVVDKPTTAN 774
Query: 779 LAPESSKQIKANIKVSSTETGVIFGNIVYETSNVLERTVVVLNDIHIDIMDYISPAVCTD 838
+ P +++ IKV+S +TGVIFGNIVY+ + + +V+LND+H+DIMDYI PA C++
Sbjct: 775 IGPHGFYKVQTTIKVTSADTGVIFGNIVYDGQHSDDSRIVILNDVHVDIMDYIKPATCSE 834
Query: 839 AAFRTMWAEFEWENKVSL 856
+ FR MW EFEWENK+++
Sbjct: 835 SQFRKMWNEFEWENKITI 852
>POMBASE|SPBC146.14c [details] [associations]
symbol:sec26 "coatomer beta subunit (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006886 "intracellular protein transport"
evidence=IC] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISS] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0030134 "ER to Golgi transport vesicle" evidence=IC]
InterPro:IPR002553 InterPro:IPR011710 InterPro:IPR016024
InterPro:IPR016460 Pfam:PF01602 Pfam:PF07718 PIRSF:PIRSF005727
PomBase:SPBC146.14c GO:GO:0005829 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0005198
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0006888
eggNOG:COG5096 GO:GO:0030126 GO:GO:0030134 HOGENOM:HOG000207417
PANTHER:PTHR10635 OMA:DFEWENK PIR:T39428 RefSeq:NP_595403.1
ProteinModelPortal:Q9UUF7 STRING:Q9UUF7 EnsemblFungi:SPBC146.14c.1
GeneID:2539798 KEGG:spo:SPBC146.14c OrthoDB:EOG483HCN
NextBio:20800947 Uniprot:Q9UUF7
Length = 940
Score = 1491 (529.9 bits), Expect = 7.4e-153, P = 7.4e-153
Identities = 319/863 (36%), Positives = 519/863 (60%)
Query: 4 SCTLLIHFD-KGTPAIANEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYV 62
SC L+ D P++ + +K +LE + K+ AMK + +++NG++LP + + ++R+V
Sbjct: 2 SCWTLVQQDFLEAPSV-DALKTSLESKNDYVKISAMKTILRVVINGDSLPSILMHVIRFV 60
Query: 63 LPSEDHTIQKLLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCR 122
+PS + ++KLL Y E+ K + G + EMIL C + RN+LQHPNE+IRG TLRFLC+
Sbjct: 61 MPSRNKELKKLLYYYWEVCPKYNNDGTMKQEMILACNSFRNDLQHPNEFIRGATLRFLCK 120
Query: 123 LNETEIIEPLIPSVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLSTE 182
L E E+++PLIP+V Q L+HRH Y+R+NAILAV +IY++ L+ DA + E L+ E
Sbjct: 121 LKEPELLDPLIPTVRQCLEHRHAYVRKNAILAVFSIYQV--SNHLIPDAASLAEDFLAAE 178
Query: 183 QDPSAKRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXX 242
+ + KRNA ++LFT D ++A +LL + +++ +V++E IRKV T
Sbjct: 179 SEGTCKRNALIVLFTIDPEKAKAWLLANFEQIPSLNASSLLVIIEFIRKVVLTKADGLEK 238
Query: 243 XXXXXX--SLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVL 300
SL +++V++E A +++++ +++ AA+ L ++DNN KLI+L
Sbjct: 239 LRFQSLLVSLTATNNSSVVFEAATSVINVFPDAESLKLAASRLLALADREADNNAKLIML 298
Query: 301 DRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXX 360
DR+++L + + I+ DLI DV+ L+S + D+ K + I++ L++ RN+
Sbjct: 299 DRISQLAARDKSILEDLITDVIPFLSSSDFDVCEKAISIIMGLVSSRNVEDILNHFQKEL 358
Query: 361 XXTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVR 420
+ +GE EK+ R+ L +AIHSCAI FP A+T + L+ + D SA V+ F++
Sbjct: 359 TKS-NGETEKDDGRRRALTKAIHSCAINFPHTAATAIQYLLSHISDFQSKSASSVLSFIK 417
Query: 421 EIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCLGE 480
E++E P LR S IT+LL + ++RA ++ +WI GEYC + ++ +I+ LGE
Sbjct: 418 EVMEKFPDLRSSNITKLLLSLKELRAGKIFRGVIWIAGEYCLTEDDIRVAWKSIRASLGE 477
Query: 481 LPFFSVSEEG-EDTDSSKKXXXXXXXXXXXXRRPAVLADGTYATQSAASETAFSPPTIVQ 539
+P + E+ +D + + VL DGTYAT+SA + A S + +
Sbjct: 478 VPILASEEQLLKDVSNVPEDDLLIDISAPASTSRKVLPDGTYATESAVTSEALSAARL-E 536
Query: 540 GTLTSGN--LRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRVEVNKASSQALLIMVSM 597
S LR+ +L+GD++L AV+A LTKLV+R + + +N ++A LIM S+
Sbjct: 537 AVKASKKPPLRTQILSGDYYLAAVLASALTKLVMRFARLSFDKERLNALKAEACLIMTSI 596
Query: 598 LQLGQSPVLPHPIDNDSFDRIVVCIRLLCNTGD--NIRKIWLQSCRQSFVKMLSEKQLRE 655
+++GQS + + ID+DS +RI+ CIR + + + + ++L R++F ++++ R+
Sbjct: 597 IRVGQSKFVKYTIDDDSVERIMNCIRAIYSFEELPEFQTVFLDDMRKAFSSLVAQSDKRQ 656
Query: 656 SE-ELKAKAQISHAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRATGEFVKEGDDANK 714
E +L + Q D+L++ + R + +L E D+ +AT + + D A+K
Sbjct: 657 KEADLLVNGSDA-VQADELLNIRQFQ-RVIEEKQDLNFE--SDIIQATNDGMVVEDLASK 712
Query: 715 LNRILQLTGFSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVERP 774
L+ I+QL GF+DPVY EAYV + +DI+LD+ ++NRT TLQNL ++LAT+GDLK+VERP
Sbjct: 713 LDHIVQLAGFTDPVYCEAYVKIQQFDIILDILLVNRTDTTLQNLSVDLATLGDLKVVERP 772
Query: 775 QNYTLAPESSKQIKANIKVSSTETGVIFGNIVYETSNVLERTVVVLNDIHIDIMDYISPA 834
L P + K ++A +KVSSTE+ VIFGNIVY E +VVLN I ++I+DYI PA
Sbjct: 773 PPMNLGPHAFKSVQATVKVSSTESAVIFGNIVYGGKASDEDKIVVLNGIPVNIIDYIKPA 832
Query: 835 VCTDAAFRTMWAEFEWENKVSLA 857
++ FR+MW EFEWENKV ++
Sbjct: 833 FIPESQFRSMWTEFEWENKVDIS 855
>SGD|S000002646 [details] [associations]
symbol:SEC26 "Essential beta-coat protein of the COPI
coatomer" species:4932 "Saccharomyces cerevisiae" [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0030126 "COPI vesicle coat" evidence=IEA;IGI;ISS] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0030135
"coated vesicle" evidence=ISS] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR011710 InterPro:IPR016024 InterPro:IPR016460
Pfam:PF01602 Pfam:PF07718 PIRSF:PIRSF005727 SGD:S000002646
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0005198 EMBL:BK006938 GO:GO:0006888
EMBL:Z49701 eggNOG:COG5096 GO:GO:0030126 HOGENOM:HOG000207417
PANTHER:PTHR10635 GeneTree:ENSGT00390000005270 OrthoDB:EOG483HCN
EMBL:U11236 PIR:S54534 RefSeq:NP_010524.3 RefSeq:NP_010529.3
ProteinModelPortal:P41810 DIP:DIP-6467N IntAct:P41810
MINT:MINT-429001 STRING:P41810 PaxDb:P41810 PeptideAtlas:P41810
EnsemblFungi:YDR238C GeneID:851824 GeneID:851830 KEGG:sce:YDR238C
KEGG:sce:YDR243C CYGD:YDR238c KO:K12858 OMA:TEFRSMW NextBio:969701
Genevestigator:P41810 GermOnline:YDR238C Uniprot:P41810
Length = 973
Score = 1471 (522.9 bits), Expect = 9.8e-151, P = 9.8e-151
Identities = 318/856 (37%), Positives = 510/856 (59%)
Query: 19 ANEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYL 78
+ + ++ALE K+D MK ++ +L G +P+L + I+R+V+PS++ ++KLL Y
Sbjct: 25 STDFQKALEKGSDEQKIDTMKSILVTMLEGNPMPELLMHIIRFVMPSKNKELKKLLYFYW 84
Query: 79 EIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQ 138
EI+ K G++ EMIL+C ++++LQHPNEYIRG TLRFL +L E E++E ++PSVL
Sbjct: 85 EIVPKLAEDGKLRHEMILVCNAIQHDLQHPNEYIRGNTLRFLTKLREAELLEQMVPSVLA 144
Query: 139 NLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLFTC 198
L++RH Y+R+ AILAV +I+K+ E LL DA E+I + E DP KRNAF+ L
Sbjct: 145 CLEYRHAYVRKYAILAVFSIFKV--SEHLLPDAKEIINSFIVAETDPICKRNAFIGLAEL 202
Query: 199 DQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVC-RTNXXXXXXXXXXXXSLLNAPSTA 257
D++ A++YL ++ + LLQ V ++ IR+ RT L S
Sbjct: 203 DRENALHYLENNIADIENLDPLLQAVFVQFIRQDANRTPALKAQYIELLMELLSTTTSDE 262
Query: 258 VIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLDRLNELRSSHRDIMVDL 317
VI+E A L LS+ P + A N L + SDNN+KLIVLDR+ ++ +++ + +L
Sbjct: 263 VIFETALALTVLSANPNVLVPAVNKLIDLAVKVSDNNIKLIVLDRIQDINANNVGALEEL 322
Query: 318 IMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQSG-ELEKNGEYRQ 376
+D+LR LN+ +LD+R K LDI ++L T RN T + + +K +YRQ
Sbjct: 323 TLDILRVLNAEDLDVRSKALDISMDLATSRNAEDVVQLLKKELQTTVNNPDQDKAMQYRQ 382
Query: 377 MLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVREIIEMNPKLRVSIITR 436
+LI+ I + A+ F E+A++VV LL+DF+GD N +A +I F++E+IE P+LR +I+
Sbjct: 383 LLIKTIRTVAVNFVEMAASVVSLLLDFIGDLNSVAASGIIAFIKEVIEKYPQLRANILEN 442
Query: 437 LLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCLGELPFFSVSEEGEDTDSS 496
++ ++R+A+ ALWI+GEY + SE+++ I+ +GE+P SE + T +
Sbjct: 443 MVQTLDKVRSAKAYRGALWIMGEYAEGESEIQHCWKHIRNSVGEVPILQ-SEIKKLTQNQ 501
Query: 497 KKXXXXXXXXXXXXRRPAVLADGTYATQSAASETAFSPPTIVQGTLTSGN-LRSLLLTGD 555
+ P +L DGTYAT+SA + S ++ S +R +L+GD
Sbjct: 502 EHTEENEVDATAKPTGPVILPDGTYATESAF-DVKTSQKSVTDEERDSRPPIRRFVLSGD 560
Query: 556 FFLGAVVACTLTKLVLRLEEVQPSRVEVNKASSQALLIMVSMLQLGQSPVLPHPIDNDSF 615
F+ A++A T+ KLVL+ E V ++ +N ++ALLI+VS++++GQS ++ ID DS
Sbjct: 561 FYTAAILANTIIKLVLKFENVSKNKTVINALKAEALLILVSIVRVGQSSLVEKKIDEDSL 620
Query: 616 DRIVVCIRLLC---NTGDNIRKI------WLQSCRQSFVKMLS-EKQLRESEELKAKAQI 665
+R++ I +L N + ++ +L + + SF + + K+ + LK +
Sbjct: 621 ERVMTSISILLDEVNPEEKKEEVKLLEVAFLDTTKSSFKRQIEIAKKNKHKRALKDSCK- 679
Query: 666 SHAQPDDL-IDFYHLKSRKGMSQLELE-DEVQDDLKRAT-GEFVK--EGDDANKLNRILQ 720
+ +P D I F + G+ ++ D +++DL+ A G+ + +KL +I+
Sbjct: 680 -NIEPIDTPISF---RQFAGVDSTNVQKDSIEEDLQLAMKGDAIHATSSSSISKLKKIVP 735
Query: 721 LTGFSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVERPQNYTLA 780
L GFSDPVYAEA +T + +D+VLDV ++N+TKETL+NL ++ AT+GDLK+++ PQ +
Sbjct: 736 LCGFSDPVYAEACITNNQFDVVLDVLLVNQTKETLKNLHVQFATLGDLKIIDTPQKTNVI 795
Query: 781 PESSKQIKANIKVSSTETGVIFGNIVYETSNVLERTVVVLNDIHIDIMDYISPAVCTDAA 840
P + +KVSS +TGVIFGNI+Y+ ++ + V+LND+H+DIMDYI PA D
Sbjct: 796 PHGFHKFTVTVKVSSADTGVIFGNIIYDGAHGEDARYVILNDVHVDIMDYIKPATADDEH 855
Query: 841 FRTMWAEFEWENKVSL 856
FRTMW FEWENK+S+
Sbjct: 856 FRTMWNAFEWENKISV 871
>UNIPROTKB|F1S982 [details] [associations]
symbol:COPB1 "Coatomer subunit beta" species:9823 "Sus
scrofa" [GO:0030117 "membrane coat" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR016460 Pfam:PF01602 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0030117
GO:GO:0016192 PANTHER:PTHR10635 GeneTree:ENSGT00390000005270
EMBL:CU487223 Ensembl:ENSSSCT00000014629 OMA:LELATLX Uniprot:F1S982
Length = 590
Score = 1258 (447.9 bits), Expect = 3.6e-128, P = 3.6e-128
Identities = 263/590 (44%), Positives = 383/590 (64%)
Query: 2 EKSCTLLIHFDKGT-PAIANEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVR 60
E C LI+ + P +K LE DV +K +A+KK I+++LNGE LP L +TI+R
Sbjct: 5 ENVCYTLINVPMDSEPPSEISLKNDLEKGDVKSKTEALKKVIIMILNGEKLPGLLMTIIR 64
Query: 61 YVLPSEDHTIQKLLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFL 120
+VLP +DHTI+KLLL++ EI+ KT GR+L EMIL+C R +LQHPNE+IRG TLRFL
Sbjct: 65 FVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGSTLRFL 124
Query: 121 CRLNETEIIEPLIPSVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLS 180
C+L E E++EPL+P++ L+HRH Y+RRNA+LA+ IY+ E L+ DAPE+I L
Sbjct: 125 CKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYR--NFEHLIPDAPELIHDFLV 182
Query: 181 TEQDPSAKRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXX 240
E+D S KRNAF+ML DQDRA++YL T +D+V +G++LQ+V++ELI KVC N
Sbjct: 183 NEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPSER 242
Query: 241 XXXXXXXXSLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVL 300
+LL + S AV YE AGTLV+LSSAPTAI+AAA Y L++ +SDNNVKLIVL
Sbjct: 243 ARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLIVL 302
Query: 301 DRLNELRS--SHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXX 358
DRL EL+ +H ++ DL+MD+LR L++P+L++R+KTL + L+L++ RN+
Sbjct: 303 DRLIELKEHPAHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVLKK 362
Query: 359 XXXXTQS-GELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVII 417
T + E E +YRQ+L++ +HSC+++FP++A+ V+ +LM+FL DSN A+A DV+
Sbjct: 363 EVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDSNEAAAADVLE 422
Query: 418 FVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQC 477
FVRE I+ LR+ I+ ++L+ F+ I++ ++ ALWI+GEYC + ++++ + +++
Sbjct: 423 FVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKEDIQSVMTEVRRS 482
Query: 478 LGELPFFSVSEEGEDTDSSKKXXXXXXXXXXXXRRPAVLADGTYATQSAASETAFSPPTI 537
LGE+P SE ++ K + V GTYATQSA S S PT
Sbjct: 483 LGEIPIVE-SEIKKEAGELKPEEEITVGPV----QKLVTEMGTYATQSALSS---SRPTK 534
Query: 538 VQGTLTSGNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRVEVNKAS 587
+ LR LL GDFF+ A +A TLTK+ LR + + + N +S
Sbjct: 535 KEEERPP--LRGFLLDGDFFVAASLATTLTKIALRYVALVQEKKKQNVSS 582
>UNIPROTKB|E9PP73 [details] [associations]
symbol:COPB1 "Coatomer subunit beta" species:9606 "Homo
sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR016460
Pfam:PF01602 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0030117 GO:GO:0016192 PANTHER:PTHR10635
HGNC:HGNC:2231 ChiTaRS:COPB1 EMBL:AC018523 IPI:IPI00982417
ProteinModelPortal:E9PP73 SMR:E9PP73 PRIDE:E9PP73
Ensembl:ENST00000534234 ArrayExpress:E9PP73 Bgee:E9PP73
Uniprot:E9PP73
Length = 486
Score = 1174 (418.3 bits), Expect = 2.9e-119, P = 2.9e-119
Identities = 228/484 (47%), Positives = 337/484 (69%)
Query: 2 EKSCTLLIHFDKGT-PAIANEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVR 60
E C LI+ + P +K LE DV +K +A+KK I+++LNGE LP L +TI+R
Sbjct: 5 ENVCYTLINVPMDSEPPSEISLKNDLEKGDVKSKTEALKKVIIMILNGEKLPGLLMTIIR 64
Query: 61 YVLPSEDHTIQKLLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFL 120
+VLP +DHTI+KLLL++ EI+ KT GR+L EMIL+C R +LQHPNE+IRG TLRFL
Sbjct: 65 FVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGSTLRFL 124
Query: 121 CRLNETEIIEPLIPSVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLS 180
C+L E E++EPL+P++ L+HRH Y+RRNA+LA+ IY+ E L+ DAPE+I L
Sbjct: 125 CKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYR--NFEHLIPDAPELIHDFLV 182
Query: 181 TEQDPSAKRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXX 240
E+D S KRNAF+ML DQDRA++YL T +D+V +G++LQ+V++ELI KVC N
Sbjct: 183 NEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPSER 242
Query: 241 XXXXXXXXSLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVL 300
+LL + S AV YE AGTLV+LSSAPTAI+AAA Y L++ +SDNNVKLIVL
Sbjct: 243 ARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLIVL 302
Query: 301 DRLNELRS--SHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXX 358
DRL EL+ +H ++ DL+MD+LR L++P+L++R+KTL + L+L++ RN+
Sbjct: 303 DRLIELKEHPAHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVLKK 362
Query: 359 XXXXTQS-GELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVII 417
T + E E +YRQ+L++ +HSC+++FP++A+ V+ +LM+FL D+N A+A DV+
Sbjct: 363 EVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDNNEAAAADVLE 422
Query: 418 FVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQC 477
FVRE I+ LR+ I+ ++L+ F+ I++ ++ ALWI+GEYC + ++++ + I++
Sbjct: 423 FVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKEDIQSVMTEIRRS 482
Query: 478 LGEL 481
LGE+
Sbjct: 483 LGEV 486
>GENEDB_PFALCIPARUM|PF14_0277 [details] [associations]
symbol:PF14_0277 "coatamer protein, beta
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=ISS]
InterPro:IPR002553 InterPro:IPR011710 InterPro:IPR016024
InterPro:IPR016460 Pfam:PF01602 Pfam:PF07718 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0005198
EMBL:AE014187 GO:GO:0030126 GO:GO:0006890 PANTHER:PTHR10635
RefSeq:XP_001348451.2 ProteinModelPortal:Q8ILG6 IntAct:Q8ILG6
MINT:MINT-1627118 PRIDE:Q8ILG6 EnsemblProtists:PF14_0277:mRNA
GeneID:811859 KEGG:pfa:PF14_0277 EuPathDB:PlasmoDB:PF3D7_1429800
HOGENOM:HOG000281254 ProtClustDB:CLSZ2433761 Uniprot:Q8ILG6
Length = 1370
Score = 418 (152.2 bits), Expect = 5.0e-85, Sum P(4) = 5.0e-85
Identities = 80/232 (34%), Positives = 143/232 (61%)
Query: 1 MEKSCTLLIHFDKGTPAIANEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVR 60
++ +CTL I D NEI++ LE +V K++ M+ I ++ G + L + ++R
Sbjct: 6 IDNNCTLYICTDNCEVPTNNEIQKKLESQNVDKKIEGMENLIFNIIQGVSYENLLMCVIR 65
Query: 61 YVLPSEDHTIQKLLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFL 120
Y++P +DH ++K+ ++ EI+DK ++ G + EMIL+C LRN++ PNEY+RG TLR L
Sbjct: 66 YIVPHKDHRLKKMCHIFFEIVDKCNSDGSLKEEMILVCNALRNDIISPNEYVRGSTLRLL 125
Query: 121 CRLNETEIIEPLIPSVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLS 180
++ +I++PL+ ++ +NL HRH Y+R+NAI + I K G ++ +A + +EK+L
Sbjct: 126 SKIKYLKILDPLMETITKNLGHRHSYVRKNAITCIHTIIK-HHGVDIIPNAVKEVEKILF 184
Query: 181 TEQDPSAKRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKV 232
E D S KR+A ML D + Y+L+ D++ + +++ + V+ L +K+
Sbjct: 185 LEGDISTKRSALAMLTDIDPLTTLKYILSLNDQLYDTADVILLEVIHLFKKL 236
Score = 301 (111.0 bits), Expect = 5.0e-85, Sum P(4) = 5.0e-85
Identities = 51/136 (37%), Positives = 90/136 (66%)
Query: 721 LTGFSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVERPQNYTLA 780
LTG D ++ EA + + ++++++ V N++ LQN+ + L+T G+LK +++ + LA
Sbjct: 1104 LTGTDDDIFIEALPIISNVNLIIEIYVYNQSNVYLQNIYINLSTHGNLKPIDKIPEFNLA 1163
Query: 781 PESSKQIKANIKVSSTETGVIFGNIVYETSNVLERTVVVLNDIHIDIMDYISPAVCTDAA 840
P K+ K ++KV +TE G+IFG + YE N + +VLN++HI++ DYI+ + +
Sbjct: 1164 PNEKKKFKISVKVHTTEAGIIFGYVFYERKNDNHKNYIVLNELHINMTDYINASFISSHL 1223
Query: 841 FRTMWAEFEWENKVSL 856
FR MW+EFEWENK+++
Sbjct: 1224 FRIMWSEFEWENKINI 1239
Score = 199 (75.1 bits), Expect = 5.0e-85, Sum P(4) = 5.0e-85
Identities = 50/151 (33%), Positives = 87/151 (57%)
Query: 205 NYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXXXXXS-LLNAPST----AVI 259
N ++ H + E GE L ++ ++ K + N LLN S +V+
Sbjct: 358 NNVIHHKNEYKELGEELNLLSEDINFKQKKLNENNYNQYKNHVIKILLNMLSKNVSYSVL 417
Query: 260 YECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLDRLNELRSSHRDIMVDLIM 319
YE A L+ +S++ +I+ A + +LL++Q DNN+KLIV+D+L + ++I+ + M
Sbjct: 418 YEGACCLLYMSTSALSIKTACECFIKLLINQHDNNIKLIVIDKLYYIMCKWKNILENYAM 477
Query: 320 DVLRALNSPNLDIRRKTLDIVLELITPRNIN 350
D+LRALN P+ DI+ K L++VL ++T RN++
Sbjct: 478 DLLRALNFPSRDIKVKILNLVLHVLTKRNVH 508
Score = 118 (46.6 bits), Expect = 5.0e-85, Sum P(4) = 5.0e-85
Identities = 43/208 (20%), Positives = 94/208 (45%)
Query: 374 YRQMLIQAI-HSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVREIIEMNPKLRVS 432
Y+++LI+++ H C + E +V LL+ ++ + + + +R++++ N + +
Sbjct: 595 YKKILIKSLQHICNLYSSECLH-IVDLLLIYVNHNEQDINYEAAVCIRKLVKNN-NFQNN 652
Query: 433 IITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCLGELPFFSVSEEGE- 491
I+ +++D+ + I+ A + W+IG+Y + + N + + L P + S E +
Sbjct: 653 ILEKMIDSIFDIKKATILRIFFWVIGQYMFNEHMIINFLNNLYDNLS--PLLNNSLENDM 710
Query: 492 ----DTDSSKKXXXXXXXXXXXX--RRPAVLADGTYATQSAASETAFSPPTIVQGTLTSG 545
+ KK + +L DGTYAT++ + +
Sbjct: 711 INKIQNERFKKNGNINFNLSNSNIQTKTVILEDGTYATEAFLKNQNICNKNNDKNKENTF 770
Query: 546 NLRSLLLTGDFFLGAVVACTLTKLVLRL 573
+ ++L D L +V+ +LTKL L+L
Sbjct: 771 -VYNILYENDDILLSVICVSLTKLYLKL 797
Score = 47 (21.6 bits), Expect = 3.1e-50, Sum P(4) = 3.1e-50
Identities = 27/106 (25%), Positives = 48/106 (45%)
Query: 686 SQLELEDEVQDDLKRATGEFVKEGDDANKLNRILQLTGFSDPVYAEAYVTVHHYDIVLDV 745
S ++ + + +D AT F+K + NK N + F VY Y + DI+L V
Sbjct: 732 SNIQTKTVILEDGTYATEAFLKNQNICNKNNDKNKENTF---VYNILY---ENDDILLSV 785
Query: 746 TVINRTKETLQNLCLELATMGDLKLVERPQNYTLAPESSKQIKANI 791
++ TK L+ L ++ D L QN + + K++K ++
Sbjct: 786 ICVSLTKLYLK-LLSKMNNSFDFIL---NQNEIICSKEKKEMKHSL 827
Score = 44 (20.5 bits), Expect = 2.7e-77, Sum P(4) = 2.7e-77
Identities = 10/36 (27%), Positives = 21/36 (58%)
Query: 463 SLSEVENGIATIKQCLGELPFFSVSEEGEDTDSSKK 498
++ E ++ + I QCL ++ F+ + + E + SKK
Sbjct: 899 NIYEYDSNVIRINQCL-KIFFYLTANKKELDEQSKK 933
Score = 43 (20.2 bits), Expect = 9.6e-69, Sum P(4) = 9.6e-69
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 293 NNVKLIVLDRLNELRSSHRDIMVDLIMDVLRALNSPNLDI 332
N ++ +D L L RDI V ++ VL L N+ +
Sbjct: 470 NILENYAMDLLRALNFPSRDIKVKILNLVLHVLTKRNVHL 509
Score = 40 (19.1 bits), Expect = 4.1e-34, Sum P(2) = 4.1e-34
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 784 SKQIKANIKVSSTETGVIFGNIVYETSNVLERTVVVLND 822
S+ IK +K+ + V+ V+ NVL++ ++ LND
Sbjct: 487 SRDIK--VKILNLVLHVLTKRNVHLVLNVLKKELLKLND 523
Score = 38 (18.4 bits), Expect = 1.3e-57, Sum P(4) = 1.3e-57
Identities = 6/24 (25%), Positives = 15/24 (62%)
Query: 803 GNIVYETSNVLERTVVVLNDIHID 826
GN ++ +N+LE++ N + ++
Sbjct: 998 GNNTFDGNNILEKSTYSRNKLFLN 1021
>UNIPROTKB|Q8ILG6 [details] [associations]
symbol:PF14_0277 "Coatamer protein, beta subunit, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0006890 "retrograde
vesicle-mediated transport, Golgi to ER" evidence=ISS]
InterPro:IPR002553 InterPro:IPR011710 InterPro:IPR016024
InterPro:IPR016460 Pfam:PF01602 Pfam:PF07718 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0005198
EMBL:AE014187 GO:GO:0030126 GO:GO:0006890 PANTHER:PTHR10635
RefSeq:XP_001348451.2 ProteinModelPortal:Q8ILG6 IntAct:Q8ILG6
MINT:MINT-1627118 PRIDE:Q8ILG6 EnsemblProtists:PF14_0277:mRNA
GeneID:811859 KEGG:pfa:PF14_0277 EuPathDB:PlasmoDB:PF3D7_1429800
HOGENOM:HOG000281254 ProtClustDB:CLSZ2433761 Uniprot:Q8ILG6
Length = 1370
Score = 418 (152.2 bits), Expect = 5.0e-85, Sum P(4) = 5.0e-85
Identities = 80/232 (34%), Positives = 143/232 (61%)
Query: 1 MEKSCTLLIHFDKGTPAIANEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVR 60
++ +CTL I D NEI++ LE +V K++ M+ I ++ G + L + ++R
Sbjct: 6 IDNNCTLYICTDNCEVPTNNEIQKKLESQNVDKKIEGMENLIFNIIQGVSYENLLMCVIR 65
Query: 61 YVLPSEDHTIQKLLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFL 120
Y++P +DH ++K+ ++ EI+DK ++ G + EMIL+C LRN++ PNEY+RG TLR L
Sbjct: 66 YIVPHKDHRLKKMCHIFFEIVDKCNSDGSLKEEMILVCNALRNDIISPNEYVRGSTLRLL 125
Query: 121 CRLNETEIIEPLIPSVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLS 180
++ +I++PL+ ++ +NL HRH Y+R+NAI + I K G ++ +A + +EK+L
Sbjct: 126 SKIKYLKILDPLMETITKNLGHRHSYVRKNAITCIHTIIK-HHGVDIIPNAVKEVEKILF 184
Query: 181 TEQDPSAKRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKV 232
E D S KR+A ML D + Y+L+ D++ + +++ + V+ L +K+
Sbjct: 185 LEGDISTKRSALAMLTDIDPLTTLKYILSLNDQLYDTADVILLEVIHLFKKL 236
Score = 301 (111.0 bits), Expect = 5.0e-85, Sum P(4) = 5.0e-85
Identities = 51/136 (37%), Positives = 90/136 (66%)
Query: 721 LTGFSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVERPQNYTLA 780
LTG D ++ EA + + ++++++ V N++ LQN+ + L+T G+LK +++ + LA
Sbjct: 1104 LTGTDDDIFIEALPIISNVNLIIEIYVYNQSNVYLQNIYINLSTHGNLKPIDKIPEFNLA 1163
Query: 781 PESSKQIKANIKVSSTETGVIFGNIVYETSNVLERTVVVLNDIHIDIMDYISPAVCTDAA 840
P K+ K ++KV +TE G+IFG + YE N + +VLN++HI++ DYI+ + +
Sbjct: 1164 PNEKKKFKISVKVHTTEAGIIFGYVFYERKNDNHKNYIVLNELHINMTDYINASFISSHL 1223
Query: 841 FRTMWAEFEWENKVSL 856
FR MW+EFEWENK+++
Sbjct: 1224 FRIMWSEFEWENKINI 1239
Score = 199 (75.1 bits), Expect = 5.0e-85, Sum P(4) = 5.0e-85
Identities = 50/151 (33%), Positives = 87/151 (57%)
Query: 205 NYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXXXXXS-LLNAPST----AVI 259
N ++ H + E GE L ++ ++ K + N LLN S +V+
Sbjct: 358 NNVIHHKNEYKELGEELNLLSEDINFKQKKLNENNYNQYKNHVIKILLNMLSKNVSYSVL 417
Query: 260 YECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLDRLNELRSSHRDIMVDLIM 319
YE A L+ +S++ +I+ A + +LL++Q DNN+KLIV+D+L + ++I+ + M
Sbjct: 418 YEGACCLLYMSTSALSIKTACECFIKLLINQHDNNIKLIVIDKLYYIMCKWKNILENYAM 477
Query: 320 DVLRALNSPNLDIRRKTLDIVLELITPRNIN 350
D+LRALN P+ DI+ K L++VL ++T RN++
Sbjct: 478 DLLRALNFPSRDIKVKILNLVLHVLTKRNVH 508
Score = 118 (46.6 bits), Expect = 5.0e-85, Sum P(4) = 5.0e-85
Identities = 43/208 (20%), Positives = 94/208 (45%)
Query: 374 YRQMLIQAI-HSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVREIIEMNPKLRVS 432
Y+++LI+++ H C + E +V LL+ ++ + + + +R++++ N + +
Sbjct: 595 YKKILIKSLQHICNLYSSECLH-IVDLLLIYVNHNEQDINYEAAVCIRKLVKNN-NFQNN 652
Query: 433 IITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCLGELPFFSVSEEGE- 491
I+ +++D+ + I+ A + W+IG+Y + + N + + L P + S E +
Sbjct: 653 ILEKMIDSIFDIKKATILRIFFWVIGQYMFNEHMIINFLNNLYDNLS--PLLNNSLENDM 710
Query: 492 ----DTDSSKKXXXXXXXXXXXX--RRPAVLADGTYATQSAASETAFSPPTIVQGTLTSG 545
+ KK + +L DGTYAT++ + +
Sbjct: 711 INKIQNERFKKNGNINFNLSNSNIQTKTVILEDGTYATEAFLKNQNICNKNNDKNKENTF 770
Query: 546 NLRSLLLTGDFFLGAVVACTLTKLVLRL 573
+ ++L D L +V+ +LTKL L+L
Sbjct: 771 -VYNILYENDDILLSVICVSLTKLYLKL 797
Score = 47 (21.6 bits), Expect = 3.1e-50, Sum P(4) = 3.1e-50
Identities = 27/106 (25%), Positives = 48/106 (45%)
Query: 686 SQLELEDEVQDDLKRATGEFVKEGDDANKLNRILQLTGFSDPVYAEAYVTVHHYDIVLDV 745
S ++ + + +D AT F+K + NK N + F VY Y + DI+L V
Sbjct: 732 SNIQTKTVILEDGTYATEAFLKNQNICNKNNDKNKENTF---VYNILY---ENDDILLSV 785
Query: 746 TVINRTKETLQNLCLELATMGDLKLVERPQNYTLAPESSKQIKANI 791
++ TK L+ L ++ D L QN + + K++K ++
Sbjct: 786 ICVSLTKLYLK-LLSKMNNSFDFIL---NQNEIICSKEKKEMKHSL 827
Score = 44 (20.5 bits), Expect = 2.7e-77, Sum P(4) = 2.7e-77
Identities = 10/36 (27%), Positives = 21/36 (58%)
Query: 463 SLSEVENGIATIKQCLGELPFFSVSEEGEDTDSSKK 498
++ E ++ + I QCL ++ F+ + + E + SKK
Sbjct: 899 NIYEYDSNVIRINQCL-KIFFYLTANKKELDEQSKK 933
Score = 43 (20.2 bits), Expect = 9.6e-69, Sum P(4) = 9.6e-69
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 293 NNVKLIVLDRLNELRSSHRDIMVDLIMDVLRALNSPNLDI 332
N ++ +D L L RDI V ++ VL L N+ +
Sbjct: 470 NILENYAMDLLRALNFPSRDIKVKILNLVLHVLTKRNVHL 509
Score = 40 (19.1 bits), Expect = 4.1e-34, Sum P(2) = 4.1e-34
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 784 SKQIKANIKVSSTETGVIFGNIVYETSNVLERTVVVLND 822
S+ IK +K+ + V+ V+ NVL++ ++ LND
Sbjct: 487 SRDIK--VKILNLVLHVLTKRNVHLVLNVLKKELLKLND 523
Score = 38 (18.4 bits), Expect = 1.3e-57, Sum P(4) = 1.3e-57
Identities = 6/24 (25%), Positives = 15/24 (62%)
Query: 803 GNIVYETSNVLERTVVVLNDIHID 826
GN ++ +N+LE++ N + ++
Sbjct: 998 GNNTFDGNNILEKSTYSRNKLFLN 1021
>UNIPROTKB|E9PKQ1 [details] [associations]
symbol:COPB1 "Coatomer subunit beta" species:9606 "Homo
sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006891 "intra-Golgi vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR016460
Pfam:PF01602 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0006891 GO:GO:0030126 PANTHER:PTHR10635
HGNC:HGNC:2231 ChiTaRS:COPB1 EMBL:AC018523 IPI:IPI00981105
ProteinModelPortal:E9PKQ1 Ensembl:ENST00000529866
ArrayExpress:E9PKQ1 Bgee:E9PKQ1 Uniprot:E9PKQ1
Length = 137
Score = 358 (131.1 bits), Expect = 8.8e-32, P = 8.8e-32
Identities = 70/133 (52%), Positives = 95/133 (71%)
Query: 2 EKSCTLLIHFDKGT-PAIANEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVR 60
E C LI+ + P +K LE DV +K +A+KK I+++LNGE LP L +TI+R
Sbjct: 5 ENVCYTLINVPMDSEPPSEISLKNDLEKGDVKSKTEALKKVIIMILNGEKLPGLLMTIIR 64
Query: 61 YVLPSEDHTIQKLLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFL 120
+VLP +DHTI+KLLL++ EI+ KT GR+L EMIL+C R +LQHPNE+IRG TLRFL
Sbjct: 65 FVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGSTLRFL 124
Query: 121 CRLNETEIIEPLI 133
C+L E E++EPL+
Sbjct: 125 CKLKEAELLEPLM 137
>UNIPROTKB|E9PP63 [details] [associations]
symbol:COPB1 "Coatomer subunit beta" species:9606 "Homo
sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006891 "intra-Golgi vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR016460
Pfam:PF01602 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0006891 GO:GO:0030126 PANTHER:PTHR10635
HGNC:HGNC:2231 ChiTaRS:COPB1 EMBL:AC018523 IPI:IPI00980624
ProteinModelPortal:E9PP63 Ensembl:ENST00000534771
ArrayExpress:E9PP63 Bgee:E9PP63 Uniprot:E9PP63
Length = 132
Score = 339 (124.4 bits), Expect = 9.8e-30, P = 9.8e-30
Identities = 67/128 (52%), Positives = 90/128 (70%)
Query: 2 EKSCTLLIHFDKGT-PAIANEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVR 60
E C LI+ + P +K LE DV +K +A+KK I+++LNGE LP L +TI+R
Sbjct: 5 ENVCYTLINVPMDSEPPSEISLKNDLEKGDVKSKTEALKKVIIMILNGEKLPGLLMTIIR 64
Query: 61 YVLPSEDHTIQKLLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFL 120
+VLP +DHTI+KLLL++ EI+ KT GR+L EMIL+C R +LQHPNE+IRG TLRFL
Sbjct: 65 FVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGSTLRFL 124
Query: 121 CRLNETEI 128
C+L E E+
Sbjct: 125 CKLKEAEL 132
>GENEDB_PFALCIPARUM|PFE1400c [details] [associations]
symbol:PFE1400c "beta adaptin protein, putative"
species:5833 "Plasmodium falciparum" [GO:0016192 "vesicle-mediated
transport" evidence=ISS] InterPro:IPR002553 InterPro:IPR009028
InterPro:IPR013037 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM01020 InterPro:IPR013041 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 HOGENOM:HOG000163270 GO:GO:0030131
Gene3D:2.60.40.1150 Gene3D:3.30.310.10 InterPro:IPR012295
PANTHER:PTHR11134 SUPFAM:SSF55711 SUPFAM:SSF49348 EMBL:AL844504
RefSeq:XP_001351835.2 ProteinModelPortal:Q8I3I6 IntAct:Q8I3I6
MINT:MINT-1744951 PRIDE:Q8I3I6 EnsemblProtists:PFE1400c:mRNA
GeneID:813094 KEGG:pfa:PFE1400c EuPathDB:PlasmoDB:PF3D7_0528100
ProtClustDB:CLSZ2433409 Uniprot:Q8I3I6
Length = 929
Score = 296 (109.3 bits), Expect = 1.0e-21, Sum P(2) = 1.0e-21
Identities = 112/486 (23%), Positives = 220/486 (45%)
Query: 20 NEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLE 79
+E+KE L + K +A+KK I + G+ + LF +V + S I+ L+YL
Sbjct: 16 HELKEELHSSHKEKKKEAIKKIIAAMTVGKDVSTLFSDVVNCMQTSN---IELKKLVYLY 72
Query: 80 IIDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQ 138
+I+ +V PE+ ++ N R + PN IR + +R + + +I E LI + +
Sbjct: 73 VINYA----KVQPELAILAVNTFRKDSSDPNPLIRALAIRTMGCIRLEQITEYLIEPLRR 128
Query: 139 NLQHRHPYIRRNAILAVMAIY----KLPQGE-------QLLVDAPEMI--EKVLS-TEQD 184
L+ PY+R+ A++ + +Y KL + E +L D M+ V+S T+
Sbjct: 129 CLKDEDPYVRKTAVICIAKLYDISPKLVEEEGFIDTLLDILDDNNAMVVANAVISLTDIC 188
Query: 185 PSAKRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXX 244
++ ++ + D++ +N LL ++ EWG++ + L L +T+
Sbjct: 189 ENSNKSILKDVINKDENN-VNKLLNAINECVEWGQVFILDALVLYEP--KTSKDAERVLE 245
Query: 245 XXXXSLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQL------LLSQSDNNVKLI 298
L +A S AV+ ++ L N + +L LLS ++ ++ I
Sbjct: 246 RILPRLSHANS-AVVLSSIKVILCLLDKINDKEFIKNVHKKLSPSLVTLLS-AEPEIQYI 303
Query: 299 VLDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXX 358
L +N + +++ D I N P ++ + LDI++ L++ +N++
Sbjct: 304 ALRNINLITQKLPNMLSDKINMFFCKYNEPAY-VKMEKLDIIIRLVSDKNVDLVLYELKE 362
Query: 359 XXXXTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAI-DVII 417
E + E+ + ++AI SCAIK P+ + +++L+D + D+ + I + I+
Sbjct: 363 YST-------EVDVEFVKKSVRAIGSCAIKLPQSSEKCINILLDLI-DTKINYVIQECIV 414
Query: 418 FVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQC 477
+++I P SIIT L +N + + +WIIGEY + + + I + +
Sbjct: 415 VIKDIFRKYPNKYESIITILCENLESLDESNAKASLIWIIGEYVERIDNADELIDSFLEN 474
Query: 478 LGELPF 483
+ P+
Sbjct: 475 FSDEPY 480
Score = 44 (20.5 bits), Expect = 1.0e-21, Sum P(2) = 1.0e-21
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 696 DDLKRATGEFVKEGDDANKLNRILQLTGFSD 726
D ++ EF + DDA+ + + L G +D
Sbjct: 647 DSYNNSSDEFNNDIDDADDSKKSMDLIGLND 677
>UNIPROTKB|Q8I3I6 [details] [associations]
symbol:PFE1400c "Beta adaptin protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0016192
"vesicle-mediated transport" evidence=ISS] InterPro:IPR002553
InterPro:IPR009028 InterPro:IPR013037 InterPro:IPR015151
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM01020
InterPro:IPR013041 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565 HOGENOM:HOG000163270
GO:GO:0030131 Gene3D:2.60.40.1150 Gene3D:3.30.310.10
InterPro:IPR012295 PANTHER:PTHR11134 SUPFAM:SSF55711
SUPFAM:SSF49348 EMBL:AL844504 RefSeq:XP_001351835.2
ProteinModelPortal:Q8I3I6 IntAct:Q8I3I6 MINT:MINT-1744951
PRIDE:Q8I3I6 EnsemblProtists:PFE1400c:mRNA GeneID:813094
KEGG:pfa:PFE1400c EuPathDB:PlasmoDB:PF3D7_0528100
ProtClustDB:CLSZ2433409 Uniprot:Q8I3I6
Length = 929
Score = 296 (109.3 bits), Expect = 1.0e-21, Sum P(2) = 1.0e-21
Identities = 112/486 (23%), Positives = 220/486 (45%)
Query: 20 NEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLE 79
+E+KE L + K +A+KK I + G+ + LF +V + S I+ L+YL
Sbjct: 16 HELKEELHSSHKEKKKEAIKKIIAAMTVGKDVSTLFSDVVNCMQTSN---IELKKLVYLY 72
Query: 80 IIDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQ 138
+I+ +V PE+ ++ N R + PN IR + +R + + +I E LI + +
Sbjct: 73 VINYA----KVQPELAILAVNTFRKDSSDPNPLIRALAIRTMGCIRLEQITEYLIEPLRR 128
Query: 139 NLQHRHPYIRRNAILAVMAIY----KLPQGE-------QLLVDAPEMI--EKVLS-TEQD 184
L+ PY+R+ A++ + +Y KL + E +L D M+ V+S T+
Sbjct: 129 CLKDEDPYVRKTAVICIAKLYDISPKLVEEEGFIDTLLDILDDNNAMVVANAVISLTDIC 188
Query: 185 PSAKRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXX 244
++ ++ + D++ +N LL ++ EWG++ + L L +T+
Sbjct: 189 ENSNKSILKDVINKDENN-VNKLLNAINECVEWGQVFILDALVLYEP--KTSKDAERVLE 245
Query: 245 XXXXSLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQL------LLSQSDNNVKLI 298
L +A S AV+ ++ L N + +L LLS ++ ++ I
Sbjct: 246 RILPRLSHANS-AVVLSSIKVILCLLDKINDKEFIKNVHKKLSPSLVTLLS-AEPEIQYI 303
Query: 299 VLDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXX 358
L +N + +++ D I N P ++ + LDI++ L++ +N++
Sbjct: 304 ALRNINLITQKLPNMLSDKINMFFCKYNEPAY-VKMEKLDIIIRLVSDKNVDLVLYELKE 362
Query: 359 XXXXTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAI-DVII 417
E + E+ + ++AI SCAIK P+ + +++L+D + D+ + I + I+
Sbjct: 363 YST-------EVDVEFVKKSVRAIGSCAIKLPQSSEKCINILLDLI-DTKINYVIQECIV 414
Query: 418 FVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQC 477
+++I P SIIT L +N + + +WIIGEY + + + I + +
Sbjct: 415 VIKDIFRKYPNKYESIITILCENLESLDESNAKASLIWIIGEYVERIDNADELIDSFLEN 474
Query: 478 LGELPF 483
+ P+
Sbjct: 475 FSDEPY 480
Score = 44 (20.5 bits), Expect = 1.0e-21, Sum P(2) = 1.0e-21
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 696 DDLKRATGEFVKEGDDANKLNRILQLTGFSD 726
D ++ EF + DDA+ + + L G +D
Sbjct: 647 DSYNNSSDEFNNDIDDADDSKKSMDLIGLND 677
>UNIPROTKB|E1BW97 [details] [associations]
symbol:AP3B1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0030123 "AP-3 adaptor complex" evidence=IEA]
[GO:0006622 "protein targeting to lysosome" evidence=IEA]
[GO:0007596 "blood coagulation" evidence=IEA] [GO:0008089
"anterograde axon cargo transport" evidence=IEA] [GO:0019903
"protein phosphatase binding" evidence=IEA] [GO:0032438 "melanosome
organization" evidence=IEA] [GO:0048007 "antigen processing and
presentation, exogenous lipid antigen via MHC class Ib"
evidence=IEA] [GO:0048490 "anterograde synaptic vesicle transport"
evidence=IEA] [GO:0051138 "positive regulation of NK T cell
differentiation" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR026739 InterPro:IPR026740
Pfam:PF01602 PIRSF:PIRSF037096 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 PANTHER:PTHR11134 GO:GO:0032438
GeneTree:ENSGT00530000063546 OMA:KRIVGMI GO:GO:0030123
GO:GO:0048007 GO:GO:0051138 GO:GO:0006622 PANTHER:PTHR11134:SF1
EMBL:AADN02046168 EMBL:AADN02046169 EMBL:AADN02046170
EMBL:AADN02046171 EMBL:AADN02046172 EMBL:AADN02046173
EMBL:AADN02046174 EMBL:AADN02046175 EMBL:AADN02046176
EMBL:AADN02046177 EMBL:AADN02046178 EMBL:AADN02046179
EMBL:AADN02046180 EMBL:AADN02046181 EMBL:AADN02046182
EMBL:AADN02046183 EMBL:AADN02046184 EMBL:AADN02046185
EMBL:AADN02046186 EMBL:AADN02046187 EMBL:AADN02046188
EMBL:AADN02046189 IPI:IPI00585450 Ensembl:ENSGALT00000006998
Uniprot:E1BW97
Length = 1100
Score = 185 (70.2 bits), Expect = 3.2e-18, Sum P(2) = 3.2e-18
Identities = 63/223 (28%), Positives = 116/223 (52%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
++K+ LE + AK+DAMK+ + ++ G+ +LF +V+ V S++ I+KL+ +YL
Sbjct: 47 DLKQMLESSKDSAKLDAMKRIVGMIAKGKNASELFPAVVKNVA-SKNIEIKKLVYVYLM- 104
Query: 81 IDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNL 140
+ + + L +L + L+ PN+ IR LR L + I+ ++ ++ +
Sbjct: 105 --RYAEEQQDLA--LLSISTFQRALKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEAS 160
Query: 141 QHRHPYIRRNAILAVMAIYKL-PQGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLF--T 197
PY+R+NA A+ +Y L P+ +++L+ E+IEK+L A + +M F
Sbjct: 161 SDLSPYVRKNAAHAIQKLYSLDPEQKEMLI---EVIEKLLRDRSTLVA--GSVVMAFEEV 215
Query: 198 C-DQDRAI--NY--LLTHVDRVSEWGELLQMVVLELIRKVCRT 235
C D+ I NY L + V EWG Q+V++ ++ + RT
Sbjct: 216 CPDRIDLIHKNYRKLCNLLVDVEEWG---QVVIIHMLTRYART 255
Score = 128 (50.1 bits), Expect = 3.2e-18, Sum P(2) = 3.2e-18
Identities = 51/221 (23%), Positives = 96/221 (43%)
Query: 250 LLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLDRLNELRSS 309
LL + + AV+ A L AP + A + S + L +S+ V+ IVL + +
Sbjct: 310 LLQSRNAAVVMAVAQLYWHL--APKS-EAGIISKSLVRLLRSNREVQYIVLQNIATMSIQ 366
Query: 310 HRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQSGELE 369
+ + + P + I+ L+I+ L NI+ Q+
Sbjct: 367 RKGMFEPYLKSFYVRSTDPTM-IKTLKLEIMTNLANEANISTLLREF-------QTYVKS 418
Query: 370 KNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVREIIEMNPKL 429
++ ++ IQAI CA EV T ++ L+ L + + + ++ ++++++ P
Sbjct: 419 QDKQFAAATIQAIGRCATNISEVTDTCLNGLVCLLSNRDEIVVAESVVVIKKLLQTQPAH 478
Query: 430 RVSII---TRLLDNFYQIRAARVCTCALWIIGEYCQSLSEV 467
II +LLDN + AR LW+IGEYC+ + ++
Sbjct: 479 HGEIIKHMAKLLDNI-TVPVARASI--LWLIGEYCERVPKI 516
>RGD|1310256 [details] [associations]
symbol:Ap3b1 "adaptor-related protein complex 3, beta 1 subunit"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0006622 "protein targeting to lysosome" evidence=ISO]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0007596 "blood coagulation" evidence=ISO] [GO:0008089
"anterograde axon cargo transport" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0019882 "antigen processing and
presentation" evidence=ISO] [GO:0019903 "protein phosphatase
binding" evidence=ISO] [GO:0030123 "AP-3 adaptor complex"
evidence=IEA] [GO:0032438 "melanosome organization" evidence=ISO]
[GO:0048007 "antigen processing and presentation, exogenous lipid
antigen via MHC class Ib" evidence=ISO] [GO:0048490 "anterograde
synaptic vesicle transport" evidence=ISO] [GO:0051138 "positive
regulation of NK T cell differentiation" evidence=ISO]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR026739
InterPro:IPR026740 Pfam:PF01602 PIRSF:PIRSF037096 RGD:1310256
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0007596 PANTHER:PTHR11134 GO:GO:0032438 OMA:KRIVGMI
OrthoDB:EOG4H729X GO:GO:0030123 GO:GO:0048007 GO:GO:0051138
GO:GO:0006622 PANTHER:PTHR11134:SF1 EMBL:CH473955 IPI:IPI00360117
UniGene:Rn.11685 Ensembl:ENSRNOT00000014278 UCSC:RGD:1310256
Uniprot:D4AA25
Length = 1096
Score = 194 (73.4 bits), Expect = 9.7e-18, Sum P(2) = 9.7e-18
Identities = 63/223 (28%), Positives = 117/223 (52%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
++K+ LE N AK+DAMK+ + ++ G+ +LF +V+ V S++ I+KL+ +YL
Sbjct: 46 DLKQMLESNKDSAKLDAMKRIVGMIAKGKNASELFPAVVKNVA-SKNIEIKKLVYVYL-- 102
Query: 81 IDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNL 140
+ + + + +L + L+ PN+ IR LR L + I+ ++ ++ +
Sbjct: 103 VRYAEEQQDLA---LLSISTFQRALKDPNQLIRASALRVLSSIRVPIIVPVMMLAIKEAS 159
Query: 141 QHRHPYIRRNAILAVMAIYKL-PQGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLF--T 197
PY+R+NA A+ +Y L P+ +++L+ E+IEK+L + A + +M F
Sbjct: 160 ADLSPYVRKNAAHAIQKLYSLDPEQKEMLI---EVIEKLLKDKSTLVA--GSVVMAFEEV 214
Query: 198 C-DQDRAI--NY--LLTHVDRVSEWGELLQMVVLELIRKVCRT 235
C D+ I NY L + V EWG Q+V++ ++ + RT
Sbjct: 215 CPDRIDLIHRNYRKLCNLLVDVEEWG---QVVIIHMLTRYART 254
Score = 114 (45.2 bits), Expect = 9.7e-18, Sum P(2) = 9.7e-18
Identities = 48/221 (21%), Positives = 94/221 (42%)
Query: 250 LLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLDRLNELRSS 309
LL + + AV+ A +S P + A + S + L +S V+ IVL + +
Sbjct: 305 LLQSRNAAVVMAVAQLYWHIS--PRS-EAGVISKSLVRLLRSHREVQYIVLQNIATMSIQ 361
Query: 310 HRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQSGELE 369
+ + + P + I+ L+I+ L NI+ Q+
Sbjct: 362 RKGMFEPYLKSFYVRSTDPTM-IKTLKLEILTNLANEANISTLLREF-------QTYVRS 413
Query: 370 KNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVREIIEMNPKL 429
++ ++ IQ I CA EV T ++ L+ L + + + ++ ++++++M P
Sbjct: 414 QDKQFAAATIQTIGRCATSIAEVTDTCLNGLVCLLSNRDEIVVAESVVVIKKLLQMQPAQ 473
Query: 430 RVSII---TRLLDNFYQIRAARVCTCALWIIGEYCQSLSEV 467
II +LLD+ + AR LW+IGE C+ + ++
Sbjct: 474 HGEIIKHMAKLLDSI-TVPVARASI--LWLIGENCERVPKI 511
>MGI|MGI:1333879 [details] [associations]
symbol:Ap3b1 "adaptor-related protein complex 3, beta 1
subunit" species:10090 "Mus musculus" [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005802 "trans-Golgi network" evidence=TAS]
[GO:0006622 "protein targeting to lysosome" evidence=IMP]
[GO:0006810 "transport" evidence=IEA] [GO:0006829 "zinc ion
transport" evidence=TAS] [GO:0006886 "intracellular protein
transport" evidence=TAS] [GO:0006897 "endocytosis" evidence=IEA]
[GO:0007596 "blood coagulation" evidence=IMP] [GO:0008089
"anterograde axon cargo transport" evidence=IMP] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=TAS] [GO:0019882 "antigen processing and presentation"
evidence=IMP] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030123
"AP-3 adaptor complex" evidence=IEA] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA] [GO:0032438 "melanosome organization"
evidence=ISO] [GO:0048007 "antigen processing and presentation,
exogenous lipid antigen via MHC class Ib" evidence=IMP] [GO:0048490
"anterograde synaptic vesicle transport" evidence=IMP] [GO:0051138
"positive regulation of NK T cell differentiation" evidence=IMP]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR026739
InterPro:IPR026740 Pfam:PF01602 PIRSF:PIRSF037096 MGI:MGI:1333879
GO:GO:0005794 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0007596 GO:GO:0006897 GO:GO:0008089 GO:GO:0005802
eggNOG:COG5096 GO:GO:0030665 PANTHER:PTHR11134 GO:GO:0032438
CTD:8546 GeneTree:ENSGT00530000063546 HOGENOM:HOG000033978
HOVERGEN:HBG050519 KO:K12397 OMA:KRIVGMI OrthoDB:EOG4H729X
GO:GO:0030123 GO:GO:0048490 GO:GO:0048007 GO:GO:0051138
GO:GO:0006622 PANTHER:PTHR11134:SF1 EMBL:AF103809 EMBL:AF255589
EMBL:AF255566 EMBL:AF255567 EMBL:AF255568 EMBL:AF255569
EMBL:AF255570 EMBL:AF255571 EMBL:AF255572 EMBL:AF255573
EMBL:AF255574 EMBL:AF255575 EMBL:AF255576 EMBL:AF255577
EMBL:AF255578 EMBL:AF255579 EMBL:AF255580 EMBL:AF255581
EMBL:AF255582 EMBL:AF255583 EMBL:AF255584 EMBL:AF255585
EMBL:AF255586 EMBL:AF255587 EMBL:AF255588 EMBL:AC122373
EMBL:AC123043 EMBL:BC015068 IPI:IPI00130444 PIR:T18295
RefSeq:NP_033810.2 UniGene:Mm.21185 ProteinModelPortal:Q9Z1T1
SMR:Q9Z1T1 DIP:DIP-49018N IntAct:Q9Z1T1 STRING:Q9Z1T1
PhosphoSite:Q9Z1T1 PaxDb:Q9Z1T1 PRIDE:Q9Z1T1
Ensembl:ENSMUST00000022196 GeneID:11774 KEGG:mmu:11774
UCSC:uc007rlv.2 InParanoid:Q9Z1T1 NextBio:279563 Bgee:Q9Z1T1
CleanEx:MM_AP3B1 Genevestigator:Q9Z1T1
GermOnline:ENSMUSG00000021686 GO:GO:0006829 Uniprot:Q9Z1T1
Length = 1105
Score = 194 (73.4 bits), Expect = 3.4e-17, Sum P(3) = 3.4e-17
Identities = 63/223 (28%), Positives = 117/223 (52%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
++K+ LE N AK+DAMK+ + ++ G+ +LF +V+ V S++ I+KL+ +YL
Sbjct: 46 DLKQMLESNKDSAKLDAMKRIVGMIAKGKNASELFPAVVKNVA-SKNIEIKKLVYVYL-- 102
Query: 81 IDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNL 140
+ + + + +L + L+ PN+ IR LR L + I+ ++ ++ +
Sbjct: 103 VRYAEEQQDLA---LLSISTFQRALKDPNQLIRASALRVLSSIRVPIIVPVMMLAIKEAS 159
Query: 141 QHRHPYIRRNAILAVMAIYKL-PQGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLF--T 197
PY+R+NA A+ +Y L P+ +++L+ E+IEK+L + A + +M F
Sbjct: 160 ADLSPYVRKNAAHAIQKLYSLDPEQKEMLI---EVIEKLLKDKSTLVA--GSVVMAFEEV 214
Query: 198 C-DQDRAI--NY--LLTHVDRVSEWGELLQMVVLELIRKVCRT 235
C D+ I NY L + V EWG Q+V++ ++ + RT
Sbjct: 215 CPDRIDLIHRNYRKLCNLLVDVEEWG---QVVIIHMLTRYART 254
Score = 116 (45.9 bits), Expect = 3.4e-17, Sum P(3) = 3.4e-17
Identities = 48/221 (21%), Positives = 95/221 (42%)
Query: 250 LLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLDRLNELRSS 309
LL + + AV+ A +S P + A + S + L +S+ V+ IVL + +
Sbjct: 308 LLQSRNAAVVMAVAQLYWHIS--PKS-EAGVISKSLVRLLRSNREVQYIVLQNIATMSIE 364
Query: 310 HRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQSGELE 369
+ + + P + I+ L+I+ L NI+ Q+
Sbjct: 365 RKGMFEPYLKSFYVRSTDPTM-IKTLKLEILTNLANEANISTLLREF-------QTYVRS 416
Query: 370 KNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVREIIEMNPKL 429
++ ++ IQ I CA EV T ++ L+ L + + + ++ ++++++M P
Sbjct: 417 QDKQFAAATIQTIGRCATSISEVTDTCLNGLVCLLSNRDEIVVAESVVVIKKLLQMQPAQ 476
Query: 430 RVSII---TRLLDNFYQIRAARVCTCALWIIGEYCQSLSEV 467
II +LLD+ + AR LW+IGE C+ + ++
Sbjct: 477 HGEIIRHMAKLLDSI-TVPVARASI--LWLIGENCERVPKI 514
Score = 40 (19.1 bits), Expect = 3.4e-17, Sum P(3) = 3.4e-17
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 483 FFSVSEEGEDTDSSK 497
F+S SEE ED D +
Sbjct: 676 FYSESEEEEDEDEDE 690
Score = 37 (18.1 bits), Expect = 6.8e-17, Sum P(3) = 6.8e-17
Identities = 12/36 (33%), Positives = 16/36 (44%)
Query: 680 KSRKGMSQL--ELEDEVQDDLKRATGEFVKEGDDAN 713
K K M + E E+E +D E KE +D N
Sbjct: 668 KKEKPMKKFYSESEEEEDEDEDEDEEEEEKEDEDEN 703
>UNIPROTKB|Q7YRF1 [details] [associations]
symbol:AP3B1 "AP-3 complex subunit beta-1" species:9615
"Canis lupus familiaris" [GO:0048490 "anterograde synaptic vesicle
transport" evidence=ISS] [GO:0008089 "anterograde axon cargo
transport" evidence=ISS] [GO:0030665 "clathrin-coated vesicle
membrane" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0030123 "AP-3 adaptor
complex" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR026739 InterPro:IPR026740 Pfam:PF01602
PIRSF:PIRSF037096 GO:GO:0005794 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0006897 GO:GO:0008089
eggNOG:COG5096 GO:GO:0030665 PANTHER:PTHR11134 CTD:8546
HOGENOM:HOG000033978 HOVERGEN:HBG050519 KO:K12397 OrthoDB:EOG4H729X
GO:GO:0030123 GO:GO:0048490 PANTHER:PTHR11134:SF1 EMBL:AY221640
RefSeq:NP_001002974.1 UniGene:Cfa.169 ProteinModelPortal:Q7YRF1
STRING:Q7YRF1 PRIDE:Q7YRF1 GeneID:403459 KEGG:cfa:403459
InParanoid:Q7YRF1 NextBio:20816977 Uniprot:Q7YRF1
Length = 1091
Score = 193 (73.0 bits), Expect = 7.0e-17, Sum P(4) = 7.0e-17
Identities = 63/223 (28%), Positives = 117/223 (52%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
++K+ LE N AK+DAMK+ + ++ G+ +LF +V+ V S++ I+KL+ +YL
Sbjct: 46 DLKQMLESNKDSAKLDAMKRIVGMIAKGKNASELFPAVVKNVA-SKNIEIKKLVYVYL-- 102
Query: 81 IDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNL 140
+ + + + +L + L+ PN+ IR LR L + I+ ++ ++ +
Sbjct: 103 VRYAEEQQDLA---LLSISTFQRALKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEAS 159
Query: 141 QHRHPYIRRNAILAVMAIYKL-PQGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLF--T 197
PY+R+NA A+ +Y L P+ +++L+ E+IEK+L + A + +M F
Sbjct: 160 ADLSPYVRKNAAHAIQKLYSLDPEQKEMLI---EVIEKLLKDKSTLVA--GSVVMAFEEV 214
Query: 198 C-DQDRAI--NY--LLTHVDRVSEWGELLQMVVLELIRKVCRT 235
C D+ I NY L + V EWG Q+V++ ++ + RT
Sbjct: 215 CPDRIDLIHKNYRKLCNLLVDVEEWG---QVVIIHMLTRYART 254
Score = 109 (43.4 bits), Expect = 7.0e-17, Sum P(4) = 7.0e-17
Identities = 40/187 (21%), Positives = 81/187 (43%)
Query: 284 SQLLLSQSDNNVKLIVLDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLEL 343
S + L +S+ V+ IVL + + + ++ + P + I+ L+I+ L
Sbjct: 338 SLVRLLRSNREVQYIVLQNIATMSIQRKGMLEPYLKSFYVRSTDPTM-IKILKLEILTNL 396
Query: 344 ITPRNINXXXXXXXXXXXXTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDF 403
NI+ Q+ ++ ++ IQ I CA EV T + L+
Sbjct: 397 ANEANISTLLREF-------QTYVKSQDKQFAAATIQTIGRCATSISEVTDTCLSGLVCL 449
Query: 404 LGDSNVASAIDVIIFVREIIEMNPKLRVSII---TRLLDNFYQIRAARVCTCALWIIGEY 460
L + + + ++ ++++++M P II +LLD+ + AR LW+IGE
Sbjct: 450 LSNRDEIVVAESVVVIKKLLQMQPAQHGEIIKHMAKLLDSI-TVPVARASI--LWLIGEN 506
Query: 461 CQSLSEV 467
C+ + ++
Sbjct: 507 CERVPKI 513
Score = 49 (22.3 bits), Expect = 7.0e-17, Sum P(4) = 7.0e-17
Identities = 21/86 (24%), Positives = 35/86 (40%)
Query: 641 RQSFVKMLSEKQLRESEELKAKAQISHAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKR 700
R S K S+ + E E K+K S + D ++ S+ E E E + + K+
Sbjct: 740 RNSKSKGKSDSEDEEKENEKSKTSDSSST-----DSSSVEESSSDSESESESESESESKK 794
Query: 701 ATGEFVKEGDDANKLNRILQLTGFSD 726
T E K+ + L + + L D
Sbjct: 795 VTMEKEKKTKEDRNLTKDVSLLDLDD 820
Score = 39 (18.8 bits), Expect = 7.0e-17, Sum P(4) = 7.0e-17
Identities = 10/15 (66%), Positives = 12/15 (80%)
Query: 483 FFSVSEEGEDT-DSS 496
F+S SEE ED+ DSS
Sbjct: 676 FYSDSEEEEDSSDSS 690
Score = 38 (18.4 bits), Expect = 8.4e-10, Sum P(4) = 8.4e-10
Identities = 22/112 (19%), Positives = 46/112 (41%)
Query: 368 LEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVREII-EMN 426
L N E + +++Q I + +I+ + L F S + I ++ EI+ +
Sbjct: 343 LRSNREVQYIVLQNIATMSIQRKGMLEPY---LKSFYVRSTDPTMIKILKL--EILTNLA 397
Query: 427 PKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCL 478
+ +S + R + + + + + IG S+SEV + + CL
Sbjct: 398 NEANISTLLREFQTYVKSQDKQFAAATIQTIGRCATSISEVTDTCLSGLVCL 449
>UNIPROTKB|O00203 [details] [associations]
symbol:AP3B1 "AP-3 complex subunit beta-1" species:9606
"Homo sapiens" [GO:0030123 "AP-3 adaptor complex" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0006622 "protein
targeting to lysosome" evidence=IEA] [GO:0007596 "blood
coagulation" evidence=IEA] [GO:0048007 "antigen processing and
presentation, exogenous lipid antigen via MHC class Ib"
evidence=IEA] [GO:0051138 "positive regulation of NK T cell
differentiation" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0030665 "clathrin-coated vesicle membrane"
evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IPI] [GO:0032438 "melanosome organization" evidence=IMP]
[GO:0006886 "intracellular protein transport" evidence=TAS]
[GO:0008089 "anterograde axon cargo transport" evidence=ISS]
[GO:0048490 "anterograde synaptic vesicle transport" evidence=ISS]
Reactome:REACT_11123 InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR026739 InterPro:IPR026740 Pfam:PF01602
PIRSF:PIRSF037096 GO:GO:0005794 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0007596 GO:GO:0006897
GO:GO:0008089 eggNOG:COG5096 GO:GO:0030665 PANTHER:PTHR11134
GO:GO:0032438 CTD:8546 HOGENOM:HOG000033978 HOVERGEN:HBG050519
KO:K12397 OMA:KRIVGMI OrthoDB:EOG4H729X GO:GO:0030123 GO:GO:0048490
GO:GO:0048007 GO:GO:0051138 GO:GO:0006622 PANTHER:PTHR11134:SF1
EMBL:U91931 EMBL:U81504 EMBL:BX538041 EMBL:AC024568 EMBL:AC024578
EMBL:AC104108 EMBL:AC112197 EMBL:BC038444 EMBL:AF247736
IPI:IPI00021129 IPI:IPI00397887 PIR:T50651 PIR:T50652
RefSeq:NP_003655.3 UniGene:Hs.532091 ProteinModelPortal:O00203
SMR:O00203 DIP:DIP-24208N IntAct:O00203 STRING:O00203
PhosphoSite:O00203 PaxDb:O00203 PRIDE:O00203 DNASU:8546
Ensembl:ENST00000255194 GeneID:8546 KEGG:hsa:8546 UCSC:uc003kfj.3
GeneCards:GC05M077296 HGNC:HGNC:566 HPA:HPA038737 MIM:203300
MIM:603401 MIM:608233 neXtProt:NX_O00203 Orphanet:183678
PharmGKB:PA24857 InParanoid:O00203 PhylomeDB:O00203 ChiTaRS:AP3B1
GenomeRNAi:8546 NextBio:32018 ArrayExpress:O00203 Bgee:O00203
CleanEx:HS_AP3B1 Genevestigator:O00203 GermOnline:ENSG00000132842
Uniprot:O00203
Length = 1094
Score = 193 (73.0 bits), Expect = 8.4e-17, Sum P(3) = 8.4e-17
Identities = 63/223 (28%), Positives = 117/223 (52%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
++K+ LE N AK+DAMK+ + ++ G+ +LF +V+ V S++ I+KL+ +YL
Sbjct: 46 DLKQMLESNKDSAKLDAMKRIVGMIAKGKNASELFPAVVKNVA-SKNIEIKKLVYVYL-- 102
Query: 81 IDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNL 140
+ + + + +L + L+ PN+ IR LR L + I+ ++ ++ +
Sbjct: 103 VRYAEEQQDLA---LLSISTFQRALKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEAS 159
Query: 141 QHRHPYIRRNAILAVMAIYKL-PQGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLF--T 197
PY+R+NA A+ +Y L P+ +++L+ E+IEK+L + A + +M F
Sbjct: 160 ADLSPYVRKNAAHAIQKLYSLDPEQKEMLI---EVIEKLLKDKSTLVA--GSVVMAFEEV 214
Query: 198 C-DQDRAI--NY--LLTHVDRVSEWGELLQMVVLELIRKVCRT 235
C D+ I NY L + V EWG Q+V++ ++ + RT
Sbjct: 215 CPDRIDLIHKNYRKLCNLLVDVEEWG---QVVIIHMLTRYART 254
Score = 113 (44.8 bits), Expect = 8.4e-17, Sum P(3) = 8.4e-17
Identities = 48/221 (21%), Positives = 95/221 (42%)
Query: 250 LLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLDRLNELRSS 309
LL + + AV+ A +S P + A + S + L +S+ V+ IVL + +
Sbjct: 307 LLQSRNAAVVMAVAQLYWHIS--PKS-EAGIISKSLVRLLRSNREVQYIVLQNIATMSIQ 363
Query: 310 HRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQSGELE 369
+ + + P + I+ L+I+ L NI+ Q+
Sbjct: 364 RKGMFEPYLKSFYVRSTDPTM-IKTLKLEILTNLANEANISTLLREF-------QTYVKS 415
Query: 370 KNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVREIIEMNPKL 429
++ ++ IQ I CA EV T ++ L+ L + + + ++ ++++++M P
Sbjct: 416 QDKQFAAATIQTIGRCATNILEVTDTCLNGLVCLLSNRDEIVVAESVVVIKKLLQMQPAQ 475
Query: 430 RVSII---TRLLDNFYQIRAARVCTCALWIIGEYCQSLSEV 467
II +LLD+ + AR LW+IGE C+ + ++
Sbjct: 476 HGEIIKHMAKLLDSI-TVPVARASI--LWLIGENCERVPKI 513
Score = 40 (19.1 bits), Expect = 8.4e-17, Sum P(3) = 8.4e-17
Identities = 10/15 (66%), Positives = 12/15 (80%)
Query: 483 FFSVSEEGEDT-DSS 496
F+S SEE ED+ DSS
Sbjct: 675 FYSESEEEEDSSDSS 689
>UNIPROTKB|F1PVY2 [details] [associations]
symbol:AP3B1 "AP-3 complex subunit beta-1" species:9615
"Canis lupus familiaris" [GO:0051138 "positive regulation of NK T
cell differentiation" evidence=IEA] [GO:0048490 "anterograde
synaptic vesicle transport" evidence=IEA] [GO:0048007 "antigen
processing and presentation, exogenous lipid antigen via MHC class
Ib" evidence=IEA] [GO:0032438 "melanosome organization"
evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0008089 "anterograde axon cargo transport"
evidence=IEA] [GO:0007596 "blood coagulation" evidence=IEA]
[GO:0006622 "protein targeting to lysosome" evidence=IEA]
[GO:0030123 "AP-3 adaptor complex" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR026739 InterPro:IPR026740
Pfam:PF01602 PIRSF:PIRSF037096 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0007596 PANTHER:PTHR11134
GO:GO:0032438 GeneTree:ENSGT00530000063546 OMA:KRIVGMI
GO:GO:0030123 GO:GO:0048007 GO:GO:0051138 GO:GO:0006622
PANTHER:PTHR11134:SF1 EMBL:AAEX03002125 Ensembl:ENSCAFT00000014640
Uniprot:F1PVY2
Length = 1090
Score = 193 (73.0 bits), Expect = 1.1e-16, Sum P(4) = 1.1e-16
Identities = 63/223 (28%), Positives = 117/223 (52%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
++K+ LE N AK+DAMK+ + ++ G+ +LF +V+ V S++ I+KL+ +YL
Sbjct: 46 DLKQMLESNKDSAKLDAMKRIVGMIAKGKNASELFPAVVKNVA-SKNIEIKKLVYVYL-- 102
Query: 81 IDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNL 140
+ + + + +L + L+ PN+ IR LR L + I+ ++ ++ +
Sbjct: 103 VRYAEEQQDLA---LLSISTFQRALKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEAS 159
Query: 141 QHRHPYIRRNAILAVMAIYKL-PQGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLF--T 197
PY+R+NA A+ +Y L P+ +++L+ E+IEK+L + A + +M F
Sbjct: 160 ADLSPYVRKNAAHAIQKLYSLDPEQKEMLI---EVIEKLLKDKSTLVA--GSVVMAFEEV 214
Query: 198 C-DQDRAI--NY--LLTHVDRVSEWGELLQMVVLELIRKVCRT 235
C D+ I NY L + V EWG Q+V++ ++ + RT
Sbjct: 215 CPDRIDLIHKNYRKLCNLLVDVEEWG---QVVIIHMLTRYART 254
Score = 107 (42.7 bits), Expect = 1.1e-16, Sum P(4) = 1.1e-16
Identities = 40/187 (21%), Positives = 80/187 (42%)
Query: 284 SQLLLSQSDNNVKLIVLDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLEL 343
S + L +S+ V+ IVL + + + + + P + I+ L+I+ L
Sbjct: 338 SLVRLLRSNREVQYIVLQNIATMSIQRKGMFEPYLKSFYVRSTDPTM-IKILKLEILTNL 396
Query: 344 ITPRNINXXXXXXXXXXXXTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDF 403
NI+ Q+ ++ ++ IQ I CA EV T + L+
Sbjct: 397 ANEANISTLLREF-------QTYVKSQDKQFAAATIQTIGRCATNISEVTDTCLSGLVCL 449
Query: 404 LGDSNVASAIDVIIFVREIIEMNPKLRVSII---TRLLDNFYQIRAARVCTCALWIIGEY 460
L + + + ++ ++++++M P II +LLD+ + AR LW+IGE
Sbjct: 450 LSNRDEIVVAESVVVIKKLLQMQPAQHGEIIKHMAKLLDSI-TVPVARASI--LWLIGEN 506
Query: 461 CQSLSEV 467
C+ + ++
Sbjct: 507 CERVPKI 513
Score = 49 (22.3 bits), Expect = 1.1e-16, Sum P(4) = 1.1e-16
Identities = 21/86 (24%), Positives = 35/86 (40%)
Query: 641 RQSFVKMLSEKQLRESEELKAKAQISHAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKR 700
R S K S+ + E E K+K S + D ++ S+ E E E + + K+
Sbjct: 739 RNSKSKGKSDSEDEEKENEKSKTSDSSST-----DSSSVEESSSDSESESESESESESKK 793
Query: 701 ATGEFVKEGDDANKLNRILQLTGFSD 726
T E K+ + L + + L D
Sbjct: 794 VTMEKEKKTKEDRNLTKDVSLLDLDD 819
Score = 39 (18.8 bits), Expect = 1.1e-16, Sum P(4) = 1.1e-16
Identities = 10/15 (66%), Positives = 12/15 (80%)
Query: 483 FFSVSEEGEDT-DSS 496
F+S SEE ED+ DSS
Sbjct: 675 FYSDSEEEEDSSDSS 689
>UNIPROTKB|F1S2G1 [details] [associations]
symbol:F1S2G1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030123 "AP-3 adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR026739 InterPro:IPR026740
Pfam:PF01602 PIRSF:PIRSF037096 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
PANTHER:PTHR11134 GeneTree:ENSGT00530000063546 OMA:KRIVGMI
GO:GO:0030123 PANTHER:PTHR11134:SF1 EMBL:CU462946 EMBL:CU657913
Ensembl:ENSSSCT00000015403 Uniprot:F1S2G1
Length = 1058
Score = 193 (73.0 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 63/223 (28%), Positives = 117/223 (52%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
++K+ LE N AK+DAMK+ + ++ G+ +LF +V+ V S++ I+KL+ +YL
Sbjct: 11 DLKQMLESNKDSAKLDAMKRIVGMIAKGKNASELFPAVVKNVA-SKNIEIKKLVYVYL-- 67
Query: 81 IDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNL 140
+ + + + +L + L+ PN+ IR LR L + I+ ++ ++ +
Sbjct: 68 VRYAEEQQDLA---LLSISTFQRALKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEAS 124
Query: 141 QHRHPYIRRNAILAVMAIYKL-PQGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLF--T 197
PY+R+NA A+ +Y L P+ +++L+ E+IEK+L + A + +M F
Sbjct: 125 ADLSPYVRKNAAHAIQKLYSLDPEQKEMLI---EIIEKLLKDKSTLVA--GSVVMAFEEV 179
Query: 198 C-DQDRAI--NY--LLTHVDRVSEWGELLQMVVLELIRKVCRT 235
C D+ I NY L + V EWG Q+V++ ++ + RT
Sbjct: 180 CPDRIDLIHKNYRKLCNLLVDVEEWG---QVVIIHMLTRYART 219
Score = 103 (41.3 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 39/178 (21%), Positives = 76/178 (42%)
Query: 288 LSQSDNNVKLIVLDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPR 347
L +S+ V+ IVL + + + + + P + I+ L+I+ L
Sbjct: 307 LLRSNREVQYIVLQNIATMSIQRKGMFEPYLKSFYVRSTDPTM-IKILKLEILTNLANEA 365
Query: 348 NINXXXXXXXXXXXXTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDS 407
NI+ Q+ ++ ++ IQ I CA EV T ++ L+ L +
Sbjct: 366 NISTLLREF-------QTYVKSQDKQFAAATIQTIGRCATNISEVTDTCLNGLVCLLSNR 418
Query: 408 NVASAIDVIIFVREIIEMNPKLRVSII---TRLLDNFYQIRAARVCTCALWIIGEYCQ 462
+ + ++ ++++++M P II +LLD+ + AR LW+IGE C+
Sbjct: 419 DEIVVAESVVVIKKLLQMQPIQHGEIIKHMAKLLDSI-TVPVARASI--LWLIGENCE 473
>UNIPROTKB|F1P7W8 [details] [associations]
symbol:AP3B2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030123 "AP-3 adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR026739 InterPro:IPR026740
Pfam:PF01602 PIRSF:PIRSF037096 InterPro:IPR013041 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
PANTHER:PTHR11134 SUPFAM:SSF49348 GeneTree:ENSGT00530000063546
GO:GO:0030123 PANTHER:PTHR11134:SF1 EMBL:AAEX03002348
EMBL:AAEX03002349 EMBL:AAEX03002347 Ensembl:ENSCAFT00000020838
Uniprot:F1P7W8
Length = 1084
Score = 168 (64.2 bits), Expect = 2.8e-16, Sum P(3) = 2.8e-16
Identities = 61/234 (26%), Positives = 116/234 (49%)
Query: 11 FDKGTPAIANEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTI 70
F K TP +++KE L+ N K++AMK+ + ++ G+ LF +V+ V ++ +
Sbjct: 14 FLKCTPR-HDDLKEMLDTNKDSLKLEAMKRIVAMIARGKNASDLFPAVVKNVA-CKNIEV 71
Query: 71 QKLLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIE 130
+KL+ +YL + + + + +L + L+ PN+ IR LR L + I+
Sbjct: 72 KKLVYVYL--VRYAEEQQDLA---LLSISTFQRGLKDPNQLIRASALRVLSSIRVPIIVP 126
Query: 131 PLIPSVLQNLQHRHPYIRRNAILAVMAIYKLP--QGEQLLVDAPEMIEKVLSTEQDPSAK 188
++ ++ + PY+R+ A A+ +Y L Q +QL+ E+IEK+L+ + A
Sbjct: 127 IMMLAIKEAASDMSPYVRKTAAHAIPKLYSLDSDQKDQLI----EVIEKLLADKTTLVA- 181
Query: 189 RNAFLMLF--TCDQDRAI---NY--LLTHVDRVSEWGELLQMVVLELIRKVCRT 235
+ +M F C + + NY L + V EWG Q+V++ ++ + RT
Sbjct: 182 -GSVVMAFEEVCPERIDLIHKNYRKLCNLLIDVEEWG---QVVIISMLTRYART 231
Score = 131 (51.2 bits), Expect = 2.8e-16, Sum P(3) = 2.8e-16
Identities = 54/222 (24%), Positives = 94/222 (42%)
Query: 250 LLNAPSTAVIYECAGTLVSLSSAPTA-IRAAANTYSQLLLSQSDNNVKLIVLDRLNELRS 308
LL + S AV+ A L AP A + A +LL S S+ V+ +VL + +
Sbjct: 294 LLQSRSAAVVMAVAQLYFHL--APKAEVGVIAKALVRLLRSHSE--VQYVVLQNVATMSI 349
Query: 309 SHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQSGEL 368
R + + P I+ L+++ L NI T +
Sbjct: 350 KRRGMFEPYLKSFYIRSTDPT-QIKILKLEVLTNLANETNIPTVLREFQ-----TYIRSM 403
Query: 369 EKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVREIIEMNPK 428
+K ++ IQAI CA V T ++ L+ L + + + ++ ++++++M P
Sbjct: 404 DK--DFVAATIQAIGRCATNIGRVRDTCLNGLVQLLSNRDELVVAESVVVIKKLLQMQPA 461
Query: 429 LRVSII---TRLLDNFYQIRAARVCTCALWIIGEYCQSLSEV 467
II +L DN Q+ AR LW+IGEYC+ + ++
Sbjct: 462 QHGEIIKHLAKLTDNI-QVPMARASI--LWLIGEYCEHVPKI 500
Score = 43 (20.2 bits), Expect = 2.8e-16, Sum P(3) = 2.8e-16
Identities = 11/21 (52%), Positives = 14/21 (66%)
Query: 533 SPPTIVQGTLTSGNLRSLLLT 553
SPPTIV +L + +L L LT
Sbjct: 825 SPPTIVSTSLAT-DLEGLTLT 844
>TAIR|locus:2117924 [details] [associations]
symbol:AT4G23460 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0008565 "protein transporter
activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] [GO:0030276 "clathrin
binding" evidence=ISS] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
GO:GO:0005886 GO:GO:0009506 GO:GO:0005794 GO:GO:0006886
EMBL:CP002687 GenomeReviews:CT486007_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565 GO:GO:0006897
eggNOG:COG5096 HOGENOM:HOG000163270 GO:GO:0030131 GO:GO:0030665
Gene3D:2.60.40.1150 Gene3D:3.30.310.10 InterPro:IPR012295
PANTHER:PTHR11134 SUPFAM:SSF55711 SUPFAM:SSF49348 KO:K12392
OMA:SDPNPLI EMBL:AL031326 EMBL:AL161559 EMBL:AY065000 EMBL:AF216387
IPI:IPI00521980 PIR:T05384 RefSeq:NP_194077.1 UniGene:At.2441
ProteinModelPortal:O81742 SMR:O81742 STRING:O81742 PaxDb:O81742
PRIDE:O81742 EnsemblPlants:AT4G23460.1 GeneID:828445
KEGG:ath:AT4G23460 TAIR:At4g23460 InParanoid:Q8VZF2
PhylomeDB:O81742 ProtClustDB:CLSN2685309 Genevestigator:O81742
Uniprot:O81742
Length = 893
Score = 239 (89.2 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 103/480 (21%), Positives = 206/480 (42%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
E+KE L + DA+KK I + G+ + LF +V + +E+ ++KL+ LYL
Sbjct: 19 ELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVN-CMQTENLELKKLVYLYL-- 75
Query: 81 IDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
I+ AK + P++ ++ N + Q PN IR + +R + + +I E L + +
Sbjct: 76 INY--AKSQ--PDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKITEYLCDPLQKC 131
Query: 140 LQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIE--KVLSTEQDPSAKRNAFLMLFT 197
L+ PY+R+ A + V ++ + E LV+ +E K L ++ +P NA L
Sbjct: 132 LKDDDPYVRKTAAICVAKLFDI-NAE--LVEDRGFLEALKDLISDNNPMVVANAVAALAE 188
Query: 198 CDQDRA-----INY-----LLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXXXX 247
++ IN LLT ++ +EWG Q+ +L+ + + ++
Sbjct: 189 IQENSTSPIFEINSTILTKLLTALNECTEWG---QVFILDALSRYKASDPREAENIVERV 245
Query: 248 XSLLNAPSTAVIYECAGTLVS---LSSAPTAIRAAANTYSQLLLS--QSDNNVKLIVLDR 302
L + AV+ ++ L ++ IR + L++ ++ ++ + L
Sbjct: 246 TPRLQHANCAVVLSAVKMILQQMELITSTDVIRNLCKKMAPPLVTLLSAEPEIQYVALRN 305
Query: 303 LNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXXX 362
+N + I+ I N P + ++ + L+I+++L + RNI+
Sbjct: 306 INLIVQKRPTILAHEIKVFFCKYNDP-IYVKMEKLEIMIKLASDRNIDQVLLEFKEYAT- 363
Query: 363 TQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVREI 422
E + ++ + ++AI CAIK A + +L++ + + II +++I
Sbjct: 364 ------EVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDI 417
Query: 423 IEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCLGELP 482
P SII L ++ + +WIIGEY + + + + + + E P
Sbjct: 418 FRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNADELLESFLENFPEEP 477
>UNIPROTKB|F1NY63 [details] [associations]
symbol:AP3B2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030123 "AP-3 adaptor complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0008089 "anterograde axon cargo transport" evidence=IEA]
[GO:0048490 "anterograde synaptic vesicle transport" evidence=IEA]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR026739
InterPro:IPR026740 Pfam:PF01602 PIRSF:PIRSF037096 GO:GO:0005634
GO:GO:0005794 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 PANTHER:PTHR11134
GeneTree:ENSGT00530000063546 GO:GO:0030123 PANTHER:PTHR11134:SF1
OMA:ANLGRVP EMBL:AADN02051067 IPI:IPI00585101
Ensembl:ENSGALT00000003336 Uniprot:F1NY63
Length = 1060
Score = 166 (63.5 bits), Expect = 3.3e-16, Sum P(3) = 3.3e-16
Identities = 57/225 (25%), Positives = 112/225 (49%)
Query: 20 NEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLE 79
+++KE L+ N K++AMK+ + ++ G+ LF +V+ V ++ ++KL+ +YL
Sbjct: 2 DDLKEMLDSNKDSLKLEAMKRIVAMIARGKNASDLFPAVVKNVA-CKNIEVKKLVYVYL- 59
Query: 80 IIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
+ + + + +L + L+ PN+ IR LR L + I+ ++ ++ +
Sbjct: 60 -VRYAEEQQDLA---LLSISTFQRGLKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEA 115
Query: 140 LQHRHPYIRRNAILAVMAIYKLP--QGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLF- 196
PY+R+ A A+ +Y L Q +QL+ E+IEK+L+ + A + +M F
Sbjct: 116 ASDMSPYVRKTAAHAIPKLYSLDSDQKDQLI----EVIEKLLADKTTLVA--GSVVMAFE 169
Query: 197 -TCDQDRAI---NY--LLTHVDRVSEWGELLQMVVLELIRKVCRT 235
C + + NY L + V EWG Q+V++ ++ + RT
Sbjct: 170 EVCPERIDLIHKNYRKLCNLLIDVEEWG---QVVIINMLTRYART 211
Score = 133 (51.9 bits), Expect = 3.3e-16, Sum P(3) = 3.3e-16
Identities = 53/222 (23%), Positives = 96/222 (43%)
Query: 250 LLNAPSTAVIYECAGTLVSLSSAPTA-IRAAANTYSQLLLSQSDNNVKLIVLDRLNELRS 308
LL + + AV+ A L AP A + A +LL S S+ V+ +VL + +
Sbjct: 271 LLQSRNAAVVMAVAQLYFHL--APKAEVGVIAKALVRLLRSHSE--VQYVVLQNVATMSI 326
Query: 309 SHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQSGEL 368
R + + P I+ L+++ L NI+ T +
Sbjct: 327 KRRGMFEPYLKSFYIRSTDPT-QIKILKLEVLTNLANETNISTILREFQ-----TYIRSM 380
Query: 369 EKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVREIIEMNPK 428
+K ++ IQAI CA +V T ++ L+ L + + + ++ ++++++M P
Sbjct: 381 DK--DFVAATIQAIGRCATNIGKVRDTCLNGLVQLLSNRDELVVAESVVVIKKLLQMQPA 438
Query: 429 LRVSII---TRLLDNFYQIRAARVCTCALWIIGEYCQSLSEV 467
II +L DN Q+ AR LW+IGEYC+ + ++
Sbjct: 439 QHSEIIKHMAKLTDNI-QVPMARASI--LWLIGEYCEHVPKI 477
Score = 42 (19.8 bits), Expect = 3.3e-16, Sum P(3) = 3.3e-16
Identities = 14/61 (22%), Positives = 29/61 (47%)
Query: 649 SEKQLRESEELKAKAQISHAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRATGEFVKE 708
SE++ E EE ++ Q + ++ + K ++ + E E+ +K+A G K+
Sbjct: 676 SEEEDEEEEEGGSEEQSEDKEGEEEEEEKRKKKKENCTSEEEEEAEGKKVKKAAGPQGKK 735
Query: 709 G 709
G
Sbjct: 736 G 736
>UNIPROTKB|F1RI97 [details] [associations]
symbol:F1RI97 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030123 "AP-3 adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR026739 InterPro:IPR026740
Pfam:PF01602 PIRSF:PIRSF037096 InterPro:IPR013041 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
PANTHER:PTHR11134 SUPFAM:SSF49348 GeneTree:ENSGT00530000063546
GO:GO:0030123 PANTHER:PTHR11134:SF1 OMA:ANLGRVP EMBL:CU326406
Ensembl:ENSSSCT00000002023 Uniprot:F1RI97
Length = 1082
Score = 164 (62.8 bits), Expect = 3.4e-16, Sum P(2) = 3.4e-16
Identities = 57/225 (25%), Positives = 112/225 (49%)
Query: 20 NEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLE 79
+++KE L+ N K++AMK+ + ++ G+ LF +V+ V ++ ++KL+ +YL
Sbjct: 40 DDLKEMLDTNKDSLKLEAMKRIVAMIARGKNASDLFPAVVKNVA-CKNIEVKKLVYVYL- 97
Query: 80 IIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
+ + + + +L + L+ PN+ IR LR L + I+ ++ ++ +
Sbjct: 98 -VRYAEEQQDLA---LLSISTFQRGLKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEA 153
Query: 140 LQHRHPYIRRNAILAVMAIYKLP--QGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLF- 196
PY+R+ A A+ +Y L Q +QL+ E+IEK+L+ + A + +M F
Sbjct: 154 ASDMSPYVRKTAAHAIPKLYSLDSDQKDQLI----EVIEKLLADKTTLVA--GSVVMAFE 207
Query: 197 -TCDQDRAI---NY--LLTHVDRVSEWGELLQMVVLELIRKVCRT 235
C + + NY L + V EWG Q+V++ ++ + RT
Sbjct: 208 EVCPERIDLIHKNYRKLCNLLIDVEEWG---QVVIISMLTRYART 249
Score = 130 (50.8 bits), Expect = 3.4e-16, Sum P(2) = 3.4e-16
Identities = 54/222 (24%), Positives = 93/222 (41%)
Query: 250 LLNAPSTAVIYECAGTLVSLSSAPTA-IRAAANTYSQLLLSQSDNNVKLIVLDRLNELRS 308
LL + S AV+ A L AP A + A +LL S S+ V+ +VL + +
Sbjct: 312 LLQSRSAAVVMAVAQLYFHL--APKAEVGVIAKALVRLLRSHSE--VQYVVLQNVATMSI 367
Query: 309 SHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQSGEL 368
R + + P I+ L+++ L NI T +
Sbjct: 368 KRRGMFEPYLKSFYIRSTDPT-QIKILKLEVLTNLANETNIPTVLREFQ-----TYIRSM 421
Query: 369 EKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVREIIEMNPK 428
+K ++ IQAI CA V T ++ L+ L + + + ++ ++++++M P
Sbjct: 422 DK--DFVAATIQAIGRCATNIGRVRDTCLNGLVQLLSNRDELVVAESVVVIKKLLQMQPA 479
Query: 429 LRVSII---TRLLDNFYQIRAARVCTCALWIIGEYCQSLSEV 467
II +L DN Q+ AR LW+IGEYC+ + +
Sbjct: 480 QHGEIIKHLAKLTDNI-QVPMARASI--LWLIGEYCEHVPRI 518
>UNIPROTKB|Q32PG1 [details] [associations]
symbol:AP3B1 "AP-3 complex subunit beta-1" species:9913
"Bos taurus" [GO:0048490 "anterograde synaptic vesicle transport"
evidence=ISS] [GO:0008089 "anterograde axon cargo transport"
evidence=ISS] [GO:0030665 "clathrin-coated vesicle membrane"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0051138 "positive regulation of NK T cell differentiation"
evidence=IEA] [GO:0048007 "antigen processing and presentation,
exogenous lipid antigen via MHC class Ib" evidence=IEA] [GO:0032438
"melanosome organization" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0007596 "blood coagulation"
evidence=IEA] [GO:0006622 "protein targeting to lysosome"
evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA] [GO:0030123
"AP-3 adaptor complex" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR026739 InterPro:IPR026740
Pfam:PF01602 PIRSF:PIRSF037096 GO:GO:0005794 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0007596 GO:GO:0006897
GO:GO:0008089 eggNOG:COG5096 GO:GO:0030665 PANTHER:PTHR11134
GO:GO:0032438 EMBL:BC108129 IPI:IPI00698557 RefSeq:NP_001070002.1
UniGene:Bt.8350 ProteinModelPortal:Q32PG1 STRING:Q32PG1
PRIDE:Q32PG1 Ensembl:ENSBTAT00000006605 GeneID:767602
KEGG:bta:767602 CTD:8546 GeneTree:ENSGT00530000063546
HOGENOM:HOG000033978 HOVERGEN:HBG050519 InParanoid:Q32PG1 KO:K12397
OMA:KRIVGMI OrthoDB:EOG4H729X NextBio:20918018 GO:GO:0030123
GO:GO:0048490 GO:GO:0048007 GO:GO:0051138 GO:GO:0006622
PANTHER:PTHR11134:SF1 Uniprot:Q32PG1
Length = 1084
Score = 193 (73.0 bits), Expect = 4.3e-16, Sum P(4) = 4.3e-16
Identities = 63/223 (28%), Positives = 117/223 (52%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
++K+ LE N AK+DAMK+ + ++ G+ +LF +V+ V S++ I+KL+ +YL
Sbjct: 46 DLKQMLESNKDSAKLDAMKRIVGMIAKGKNASELFPAVVKNVA-SKNIEIKKLVYVYL-- 102
Query: 81 IDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNL 140
+ + + + +L + L+ PN+ IR LR L + I+ ++ ++ +
Sbjct: 103 VRYAEEQQDLA---LLSISTFQRALKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEAS 159
Query: 141 QHRHPYIRRNAILAVMAIYKL-PQGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLF--T 197
PY+R+NA A+ +Y L P+ +++L+ E+IEK+L + A + +M F
Sbjct: 160 ADLSPYVRKNAAHAIQKLYSLDPEQKEMLI---EIIEKLLKDKSTLVA--GSVVMAFEEV 214
Query: 198 C-DQDRAI--NY--LLTHVDRVSEWGELLQMVVLELIRKVCRT 235
C D+ I NY L + V EWG Q+V++ ++ + RT
Sbjct: 215 CPDRIDLIHKNYRKLCNLLVDVEEWG---QVVIIHMLTRYART 254
Score = 110 (43.8 bits), Expect = 4.3e-16, Sum P(4) = 4.3e-16
Identities = 48/222 (21%), Positives = 99/222 (44%)
Query: 250 LLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLDRLNELRSS 309
LL + + AV+ A + AP + A + S + L +S V+ IVL + +
Sbjct: 307 LLQSRNAAVVMAVAQLYWHI--APKS-EAGIISKSLVRLLRSSREVQYIVLQNIATMSIQ 363
Query: 310 HRDIMVDLIMDV-LRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQSGEL 368
+ + + +R+ ++ + I + L+I+ L NI+ Q+
Sbjct: 364 RKGMFEPYLKSFYVRSTDATMIKILK--LEILTNLANEANISTLLREF-------QTYVK 414
Query: 369 EKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVREIIEMNPK 428
++ ++ IQ I CA EV+ T ++ L+ L + + + ++ ++++++M P
Sbjct: 415 SQDKQFAAATIQTIGRCATSITEVSDTCLNGLVCLLSNRDEIVVAESVVVIKKLLQMQPM 474
Query: 429 LRVSII---TRLLDNFYQIRAARVCTCALWIIGEYCQSLSEV 467
II +LLD+ + AR LW+IGE C+ + ++
Sbjct: 475 QHGEIIKHMAKLLDSI-TVPVARASI--LWLIGENCERVPKI 513
Score = 40 (19.1 bits), Expect = 4.3e-16, Sum P(4) = 4.3e-16
Identities = 10/33 (30%), Positives = 20/33 (60%)
Query: 766 GDLKLVERPQNYTLAPESSKQIKANIKVSSTET 798
GD K V++ + + ESS ++I+ SS+++
Sbjct: 740 GDSKDVDKEKENSKTSESSSGESSSIEESSSDS 772
Score = 39 (18.8 bits), Expect = 4.3e-16, Sum P(4) = 4.3e-16
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 483 FFSVSEEGEDTDSS 496
F+S SEE ED+ S
Sbjct: 675 FYSESEEEEDSSES 688
>UNIPROTKB|J9P1J6 [details] [associations]
symbol:AP3B2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030123 "AP-3 adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR026739 InterPro:IPR026740
Pfam:PF01602 PIRSF:PIRSF037096 InterPro:IPR013041 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
PANTHER:PTHR11134 SUPFAM:SSF49348 GeneTree:ENSGT00530000063546
GO:GO:0030123 PANTHER:PTHR11134:SF1 OMA:ANLGRVP EMBL:AAEX03002348
EMBL:AAEX03002349 EMBL:AAEX03002347 Ensembl:ENSCAFT00000049658
Uniprot:J9P1J6
Length = 1102
Score = 165 (63.1 bits), Expect = 6.2e-16, Sum P(3) = 6.2e-16
Identities = 58/229 (25%), Positives = 113/229 (49%)
Query: 16 PAIANEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLL 75
P +++KE L+ N K++AMK+ + ++ G+ LF +V+ V ++ ++KL+
Sbjct: 79 PLRHDDLKEMLDTNKDSLKLEAMKRIVAMIARGKNASDLFPAVVKNVA-CKNIEVKKLVY 137
Query: 76 LYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPS 135
+YL + + + + +L + L+ PN+ IR LR L + I+ ++ +
Sbjct: 138 VYL--VRYAEEQQDLA---LLSISTFQRGLKDPNQLIRASALRVLSSIRVPIIVPIMMLA 192
Query: 136 VLQNLQHRHPYIRRNAILAVMAIYKLP--QGEQLLVDAPEMIEKVLSTEQDPSAKRNAFL 193
+ + PY+R+ A A+ +Y L Q +QL+ E+IEK+L+ + A + +
Sbjct: 193 IKEAASDMSPYVRKTAAHAIPKLYSLDSDQKDQLI----EVIEKLLADKTTLVA--GSVV 246
Query: 194 MLF--TCDQDRAI---NY--LLTHVDRVSEWGELLQMVVLELIRKVCRT 235
M F C + + NY L + V EWG Q+V++ ++ + RT
Sbjct: 247 MAFEEVCPERIDLIHKNYRKLCNLLIDVEEWG---QVVIISMLTRYART 292
Score = 131 (51.2 bits), Expect = 6.2e-16, Sum P(3) = 6.2e-16
Identities = 54/222 (24%), Positives = 94/222 (42%)
Query: 250 LLNAPSTAVIYECAGTLVSLSSAPTA-IRAAANTYSQLLLSQSDNNVKLIVLDRLNELRS 308
LL + S AV+ A L AP A + A +LL S S+ V+ +VL + +
Sbjct: 355 LLQSRSAAVVMAVAQLYFHL--APKAEVGVIAKALVRLLRSHSE--VQYVVLQNVATMSI 410
Query: 309 SHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQSGEL 368
R + + P I+ L+++ L NI T +
Sbjct: 411 KRRGMFEPYLKSFYIRSTDPT-QIKILKLEVLTNLANETNIPTVLREFQ-----TYIRSM 464
Query: 369 EKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVREIIEMNPK 428
+K ++ IQAI CA V T ++ L+ L + + + ++ ++++++M P
Sbjct: 465 DK--DFVAATIQAIGRCATNIGRVRDTCLNGLVQLLSNRDELVVAESVVVIKKLLQMQPA 522
Query: 429 LRVSII---TRLLDNFYQIRAARVCTCALWIIGEYCQSLSEV 467
II +L DN Q+ AR LW+IGEYC+ + ++
Sbjct: 523 QHGEIIKHLAKLTDNI-QVPMARASI--LWLIGEYCEHVPKI 561
Score = 43 (20.2 bits), Expect = 6.2e-16, Sum P(3) = 6.2e-16
Identities = 11/21 (52%), Positives = 14/21 (66%)
Query: 533 SPPTIVQGTLTSGNLRSLLLT 553
SPPTIV +L + +L L LT
Sbjct: 867 SPPTIVSTSLAT-DLEGLTLT 886
>UNIPROTKB|E5RJ68 [details] [associations]
symbol:AP3B1 "AP-3 complex subunit beta-1" species:9606
"Homo sapiens" [GO:0030123 "AP-3 adaptor complex" evidence=IEA]
[GO:0006622 "protein targeting to lysosome" evidence=IEA]
[GO:0007596 "blood coagulation" evidence=IEA] [GO:0008089
"anterograde axon cargo transport" evidence=IEA] [GO:0048007
"antigen processing and presentation, exogenous lipid antigen via
MHC class Ib" evidence=IEA] [GO:0048490 "anterograde synaptic
vesicle transport" evidence=IEA] [GO:0051138 "positive regulation
of NK T cell differentiation" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR026739 InterPro:IPR026740
Pfam:PF01602 PIRSF:PIRSF037096 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0007596 PANTHER:PTHR11134
GO:GO:0030123 GO:GO:0048007 GO:GO:0051138 GO:GO:0006622
PANTHER:PTHR11134:SF1 EMBL:AC024568 EMBL:AC024578 EMBL:AC104108
EMBL:AC112197 GeneID:8546 HGNC:HGNC:566 ChiTaRS:AP3B1
IPI:IPI00982231 RefSeq:NP_001258698.1 ProteinModelPortal:E5RJ68
SMR:E5RJ68 PRIDE:E5RJ68 Ensembl:ENST00000519295 ArrayExpress:E5RJ68
Bgee:E5RJ68 Uniprot:E5RJ68
Length = 1045
Score = 183 (69.5 bits), Expect = 8.3e-16, Sum P(3) = 8.3e-16
Identities = 62/218 (28%), Positives = 113/218 (51%)
Query: 26 LEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEIIDKTD 85
LE N AK+DAMK+ + ++ G+ +LF +V+ V S++ I+KL+ +YL + +
Sbjct: 2 LESNKDSAKLDAMKRIVGMIAKGKNASELFPAVVKNVA-SKNIEIKKLVYVYL--VRYAE 58
Query: 86 AKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNLQHRHP 145
+ + +L + L+ PN+ IR LR L + I+ ++ ++ + P
Sbjct: 59 EQQDLA---LLSISTFQRALKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEASADLSP 115
Query: 146 YIRRNAILAVMAIYKL-PQGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLF--TC-DQD 201
Y+R+NA A+ +Y L P+ +++L+ E+IEK+L + A + +M F C D+
Sbjct: 116 YVRKNAAHAIQKLYSLDPEQKEMLI---EVIEKLLKDKSTLVA--GSVVMAFEEVCPDRI 170
Query: 202 RAI--NY--LLTHVDRVSEWGELLQMVVLELIRKVCRT 235
I NY L + V EWG Q+V++ ++ + RT
Sbjct: 171 DLIHKNYRKLCNLLVDVEEWG---QVVIIHMLTRYART 205
Score = 113 (44.8 bits), Expect = 8.3e-16, Sum P(3) = 8.3e-16
Identities = 48/221 (21%), Positives = 95/221 (42%)
Query: 250 LLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLDRLNELRSS 309
LL + + AV+ A +S P + A + S + L +S+ V+ IVL + +
Sbjct: 258 LLQSRNAAVVMAVAQLYWHIS--PKS-EAGIISKSLVRLLRSNREVQYIVLQNIATMSIQ 314
Query: 310 HRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQSGELE 369
+ + + P + I+ L+I+ L NI+ Q+
Sbjct: 315 RKGMFEPYLKSFYVRSTDPTM-IKTLKLEILTNLANEANISTLLREF-------QTYVKS 366
Query: 370 KNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVREIIEMNPKL 429
++ ++ IQ I CA EV T ++ L+ L + + + ++ ++++++M P
Sbjct: 367 QDKQFAAATIQTIGRCATNILEVTDTCLNGLVCLLSNRDEIVVAESVVVIKKLLQMQPAQ 426
Query: 430 RVSII---TRLLDNFYQIRAARVCTCALWIIGEYCQSLSEV 467
II +LLD+ + AR LW+IGE C+ + ++
Sbjct: 427 HGEIIKHMAKLLDSI-TVPVARASI--LWLIGENCERVPKI 464
Score = 40 (19.1 bits), Expect = 8.3e-16, Sum P(3) = 8.3e-16
Identities = 10/15 (66%), Positives = 12/15 (80%)
Query: 483 FFSVSEEGEDT-DSS 496
F+S SEE ED+ DSS
Sbjct: 626 FYSESEEEEDSSDSS 640
>MGI|MGI:1100869 [details] [associations]
symbol:Ap3b2 "adaptor-related protein complex 3, beta 2
subunit" species:10090 "Mus musculus" [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005802 "trans-Golgi network" evidence=TAS]
[GO:0006810 "transport" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=TAS] [GO:0006897 "endocytosis"
evidence=IEA] [GO:0008089 "anterograde axon cargo transport"
evidence=IMP] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=TAS] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0030123 "AP-3 adaptor complex" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0048490 "anterograde
synaptic vesicle transport" evidence=IMP] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR026739 InterPro:IPR026740
Pfam:PF01602 PIRSF:PIRSF037096 MGI:MGI:1100869 GO:GO:0005634
GO:GO:0005794 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0006897 GO:GO:0008089 GO:GO:0005802
eggNOG:COG5096 GO:GO:0030665 PANTHER:PTHR11134
GeneTree:ENSGT00530000063546 HOGENOM:HOG000033978
HOVERGEN:HBG050519 KO:K12397 GO:GO:0030123 GO:GO:0048490
PANTHER:PTHR11134:SF1 CTD:8120 OrthoDB:EOG4VQ9NJ EMBL:AY528675
EMBL:BC139378 EMBL:BC139379 EMBL:AK134504 EMBL:AB030202
IPI:IPI00420426 RefSeq:NP_067467.2 UniGene:Mm.322894
ProteinModelPortal:Q9JME5 SMR:Q9JME5 IntAct:Q9JME5 STRING:Q9JME5
PhosphoSite:Q9JME5 PaxDb:Q9JME5 PRIDE:Q9JME5
Ensembl:ENSMUST00000082090 GeneID:11775 KEGG:mmu:11775
UCSC:uc009iby.1 InParanoid:Q3UYP8 OMA:ANLGRVP NextBio:279567
Bgee:Q9JME5 CleanEx:MM_AP3B2 Genevestigator:Q9JME5
GermOnline:ENSMUSG00000062444 Uniprot:Q9JME5
Length = 1082
Score = 164 (62.8 bits), Expect = 2.4e-15, Sum P(3) = 2.4e-15
Identities = 57/225 (25%), Positives = 112/225 (49%)
Query: 20 NEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLE 79
+++KE L+ N K++AMK+ + ++ G+ LF +V+ V ++ ++KL+ +YL
Sbjct: 40 DDLKEMLDTNKDSLKLEAMKRIVAMIARGKNASDLFPAVVKNVA-CKNIEVKKLVYVYL- 97
Query: 80 IIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
+ + + + +L + L+ PN+ IR LR L + I+ ++ ++ +
Sbjct: 98 -VRYAEEQQDLA---LLSISTFQRGLKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEA 153
Query: 140 LQHRHPYIRRNAILAVMAIYKLP--QGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLF- 196
PY+R+ A A+ +Y L Q +QL+ E+IEK+L+ + A + +M F
Sbjct: 154 ASDMSPYVRKTAAHAIPKLYSLDSDQKDQLI----EVIEKLLADKTTLVA--GSVVMAFE 207
Query: 197 -TCDQDRAI---NY--LLTHVDRVSEWGELLQMVVLELIRKVCRT 235
C + + NY L + V EWG Q+V++ ++ + RT
Sbjct: 208 EVCPERIDLIHKNYRKLCNLLIDVEEWG---QVVIISMLTRYART 249
Score = 131 (51.2 bits), Expect = 2.4e-15, Sum P(3) = 2.4e-15
Identities = 54/222 (24%), Positives = 94/222 (42%)
Query: 250 LLNAPSTAVIYECAGTLVSLSSAPTA-IRAAANTYSQLLLSQSDNNVKLIVLDRLNELRS 308
LL + S AV+ A L AP A + A +LL S S+ V+ +VL + +
Sbjct: 312 LLQSRSAAVVMAVAQLYFHL--APKAEVGVIAKALVRLLRSHSE--VQYVVLQNVATMSI 367
Query: 309 SHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQSGEL 368
R + + P I+ L+++ L NI T +
Sbjct: 368 KRRGMFEPYLKSFYIRSTDPT-QIKILKLEVLTNLANETNIPTVLREFQ-----TYIRSM 421
Query: 369 EKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVREIIEMNPK 428
+K ++ IQAI CA V T ++ L+ L + + + ++ ++++++M P
Sbjct: 422 DK--DFVAATIQAIGRCATNIGRVRDTCLNGLVQLLSNRDELVVAESVVVIKKLLQMQPA 479
Query: 429 LRVSII---TRLLDNFYQIRAARVCTCALWIIGEYCQSLSEV 467
II +L DN Q+ AR LW+IGEYC+ + ++
Sbjct: 480 QHGEIIKHLAKLTDNI-QVPMARASI--LWLIGEYCEHVPKI 518
Score = 38 (18.4 bits), Expect = 2.4e-15, Sum P(3) = 2.4e-15
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 485 SVSEEGEDTDSSKK 498
S SEEG D+ SS +
Sbjct: 759 SSSEEGSDSSSSSE 772
>RGD|1308950 [details] [associations]
symbol:Ap3b2 "adaptor-related protein complex 3, beta 2 subunit"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=IEA;ISO] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0008089 "anterograde axon
cargo transport" evidence=IEA;ISO] [GO:0030123 "AP-3 adaptor
complex" evidence=IEA] [GO:0048490 "anterograde synaptic vesicle
transport" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR026739
InterPro:IPR026740 Pfam:PF01602 PIRSF:PIRSF037096 RGD:1308950
GO:GO:0005634 GO:GO:0005794 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
PANTHER:PTHR11134 GeneTree:ENSGT00530000063546 KO:K12397
GO:GO:0030123 PANTHER:PTHR11134:SF1 CTD:8120 OrthoDB:EOG4VQ9NJ
OMA:ANLGRVP IPI:IPI00767753 RefSeq:XP_003748939.1
RefSeq:XP_003753350.1 PRIDE:D4AE00 Ensembl:ENSRNOT00000026030
GeneID:308777 KEGG:rno:308777 Uniprot:D4AE00
Length = 1082
Score = 164 (62.8 bits), Expect = 2.4e-15, Sum P(3) = 2.4e-15
Identities = 57/225 (25%), Positives = 112/225 (49%)
Query: 20 NEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLE 79
+++KE L+ N K++AMK+ + ++ G+ LF +V+ V ++ ++KL+ +YL
Sbjct: 40 DDLKEMLDTNKDSLKLEAMKRIVAMIARGKNASDLFPAVVKNVA-CKNIEVKKLVYVYL- 97
Query: 80 IIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
+ + + + +L + L+ PN+ IR LR L + I+ ++ ++ +
Sbjct: 98 -VRYAEEQQDLA---LLSISTFQRGLKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEA 153
Query: 140 LQHRHPYIRRNAILAVMAIYKLP--QGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLF- 196
PY+R+ A A+ +Y L Q +QL+ E+IEK+L+ + A + +M F
Sbjct: 154 ASDMSPYVRKTAAHAIPKLYSLDSDQKDQLI----EVIEKLLADKTTLVA--GSVVMAFE 207
Query: 197 -TCDQDRAI---NY--LLTHVDRVSEWGELLQMVVLELIRKVCRT 235
C + + NY L + V EWG Q+V++ ++ + RT
Sbjct: 208 EVCPERIDLIHKNYRKLCNLLIDVEEWG---QVVIISMLTRYART 249
Score = 131 (51.2 bits), Expect = 2.4e-15, Sum P(3) = 2.4e-15
Identities = 54/222 (24%), Positives = 94/222 (42%)
Query: 250 LLNAPSTAVIYECAGTLVSLSSAPTA-IRAAANTYSQLLLSQSDNNVKLIVLDRLNELRS 308
LL + S AV+ A L AP A + A +LL S S+ V+ +VL + +
Sbjct: 312 LLQSRSAAVVMAVAQLYFHL--APKAEVGVIAKALVRLLRSHSE--VQYVVLQNVATMSI 367
Query: 309 SHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQSGEL 368
R + + P I+ L+++ L NI T +
Sbjct: 368 KRRGMFEPYLKSFYIRSTDPT-QIKILKLEVLTNLANETNIPTVLREFQ-----TYIRSM 421
Query: 369 EKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVREIIEMNPK 428
+K ++ IQAI CA V T ++ L+ L + + + ++ ++++++M P
Sbjct: 422 DK--DFVAATIQAIGRCATNIGRVRDTCLNGLVQLLSNRDELVVAESVVVIKKLLQMQPA 479
Query: 429 LRVSII---TRLLDNFYQIRAARVCTCALWIIGEYCQSLSEV 467
II +L DN Q+ AR LW+IGEYC+ + ++
Sbjct: 480 QHGEIIKHLAKLTDNI-QVPMARASI--LWLIGEYCEHVPKI 518
Score = 38 (18.4 bits), Expect = 2.4e-15, Sum P(3) = 2.4e-15
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 485 SVSEEGEDTDSSKK 498
S SEEG D+ SS +
Sbjct: 759 SSSEEGSDSSSSSE 772
>UNIPROTKB|E1BME2 [details] [associations]
symbol:AP3B2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048490 "anterograde synaptic vesicle transport"
evidence=IEA] [GO:0008089 "anterograde axon cargo transport"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0044431
"Golgi apparatus part" evidence=IEA] [GO:0030123 "AP-3 adaptor
complex" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR026739 InterPro:IPR026740 Pfam:PF01602
PIRSF:PIRSF037096 InterPro:IPR013041 InterPro:IPR008153
GO:GO:0005634 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 PANTHER:PTHR11134 SUPFAM:SSF49348
Gene3D:2.60.40.1230 GO:GO:0044431 GeneTree:ENSGT00530000063546
KO:K12397 GO:GO:0030123 PANTHER:PTHR11134:SF1 CTD:8120 OMA:ANLGRVP
EMBL:DAAA02052226 IPI:IPI00923881 RefSeq:NP_001230264.1
UniGene:Bt.10002 Ensembl:ENSBTAT00000061606 GeneID:784163
KEGG:bta:784163 NextBio:20926528 ArrayExpress:E1BME2 Uniprot:E1BME2
Length = 1085
Score = 158 (60.7 bits), Expect = 2.6e-15, Sum P(3) = 2.6e-15
Identities = 56/225 (24%), Positives = 111/225 (49%)
Query: 20 NEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLE 79
+++K L+ N K++AMK+ + ++ G+ LF +V+ V ++ ++KL+ +YL
Sbjct: 40 DDLKAMLDTNKDSLKLEAMKRIVAMIARGKNASDLFPAVVKNVA-CKNIEVKKLVYVYL- 97
Query: 80 IIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
+ + + + +L + L+ PN+ IR LR L + I+ ++ ++ +
Sbjct: 98 -VRYAEEQQDLA---LLSISTFQRGLKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEA 153
Query: 140 LQHRHPYIRRNAILAVMAIYKLP--QGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLF- 196
PY+R+ A A+ +Y L Q +QL+ E+IEK+L+ + A + +M F
Sbjct: 154 ASDMSPYVRKTAAHAIPKLYSLDSDQKDQLI----EVIEKLLADKTTLVA--GSVVMAFE 207
Query: 197 -TCDQDRAI---NY--LLTHVDRVSEWGELLQMVVLELIRKVCRT 235
C + + NY L + V EWG Q+V++ ++ + RT
Sbjct: 208 EVCPERIDLIHKNYRKLCNLLIDVEEWG---QVVIISMLTRYART 249
Score = 130 (50.8 bits), Expect = 2.6e-15, Sum P(3) = 2.6e-15
Identities = 54/222 (24%), Positives = 93/222 (41%)
Query: 250 LLNAPSTAVIYECAGTLVSLSSAPTA-IRAAANTYSQLLLSQSDNNVKLIVLDRLNELRS 308
LL + S AV+ A L AP A + A +LL S S+ V+ +VL + +
Sbjct: 312 LLQSRSAAVVMAVAQLYFHL--APKAEVGVIAKALVRLLRSHSE--VQYVVLQNVATMSI 367
Query: 309 SHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQSGEL 368
R + + P I+ L+++ L NI T +
Sbjct: 368 KRRGMFEPYLKSFYIRSTDPT-QIKILKLEVLTNLANETNIPTVLREFQ-----TYIRSM 421
Query: 369 EKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVREIIEMNPK 428
+K ++ IQAI CA V T ++ L+ L + + + ++ ++++++M P
Sbjct: 422 DK--DFVAATIQAIGRCATNIGRVRDTCLNGLVQLLSNRDELVVAESVVVIKKLLQMQPA 479
Query: 429 LRVSII---TRLLDNFYQIRAARVCTCALWIIGEYCQSLSEV 467
II +L DN Q+ AR LW+IGEYC+ + +
Sbjct: 480 QHGEIIKHLAKLTDNI-QVPMARASI--LWLIGEYCEHVPRI 518
Score = 45 (20.9 bits), Expect = 2.6e-15, Sum P(3) = 2.6e-15
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 527 ASETAFSPPTIVQGTLTSGNLRSLLLT 553
AS SPPT+V +L + +L L LT
Sbjct: 820 ASVQPVSPPTVVSTSLAA-DLEGLTLT 845
>UNIPROTKB|Q13367 [details] [associations]
symbol:AP3B2 "AP-3 complex subunit beta-2" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0030123 "AP-3 adaptor complex" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0030665
"clathrin-coated vesicle membrane" evidence=IEA] [GO:0008089
"anterograde axon cargo transport" evidence=ISS] [GO:0048490
"anterograde synaptic vesicle transport" evidence=ISS] [GO:0005215
"transporter activity" evidence=TAS] [GO:0030137 "COPI-coated
vesicle" evidence=TAS] [GO:0006892 "post-Golgi vesicle-mediated
transport" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR026739
InterPro:IPR026740 Pfam:PF01602 PIRSF:PIRSF037096
InterPro:IPR013041 InterPro:IPR008153 GO:GO:0005634 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0006897
GO:GO:0005215 GO:GO:0008089 eggNOG:COG5096 GO:GO:0030665
PANTHER:PTHR11134 SUPFAM:SSF49348 GO:GO:0006892 Gene3D:2.60.40.1230
HOVERGEN:HBG050519 KO:K12397 GO:GO:0030123 GO:GO:0048490
PANTHER:PTHR11134:SF1 EMBL:U37673 EMBL:AF022152 EMBL:DQ092369
EMBL:BC093739 IPI:IPI00005793 IPI:IPI01011317 PIR:T50650
RefSeq:NP_004635.2 UniGene:Hs.199593 ProteinModelPortal:Q13367
SMR:Q13367 IntAct:Q13367 STRING:Q13367 PhosphoSite:Q13367
DMDM:18202497 PaxDb:Q13367 PRIDE:Q13367 Ensembl:ENST00000261722
GeneID:8120 KEGG:hsa:8120 UCSC:uc010uog.2 CTD:8120
GeneCards:GC15M083328 HGNC:HGNC:567 HPA:HPA039467 HPA:HPA039818
MIM:602166 neXtProt:NX_Q13367 PharmGKB:PA24858 InParanoid:Q13367
OrthoDB:EOG4VQ9NJ GenomeRNAi:8120 NextBio:30780 ArrayExpress:Q13367
Bgee:Q13367 CleanEx:HS_AP3B2 Genevestigator:Q13367
GermOnline:ENSG00000103723 GO:GO:0030137 Uniprot:Q13367
Length = 1082
Score = 164 (62.8 bits), Expect = 3.0e-15, Sum P(3) = 3.0e-15
Identities = 57/225 (25%), Positives = 112/225 (49%)
Query: 20 NEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLE 79
+++KE L+ N K++AMK+ + ++ G+ LF +V+ V ++ ++KL+ +YL
Sbjct: 40 DDLKEMLDTNKDSLKLEAMKRIVAMIARGKNASDLFPAVVKNVA-CKNIEVKKLVYVYL- 97
Query: 80 IIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
+ + + + +L + L+ PN+ IR LR L + I+ ++ ++ +
Sbjct: 98 -VRYAEEQQDLA---LLSISTFQRGLKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEA 153
Query: 140 LQHRHPYIRRNAILAVMAIYKLP--QGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLF- 196
PY+R+ A A+ +Y L Q +QL+ E+IEK+L+ + A + +M F
Sbjct: 154 ASDMSPYVRKTAAHAIPKLYSLDSDQKDQLI----EVIEKLLADKTTLVA--GSVVMAFE 207
Query: 197 -TCDQDRAI---NY--LLTHVDRVSEWGELLQMVVLELIRKVCRT 235
C + + NY L + V EWG Q+V++ ++ + RT
Sbjct: 208 EVCPERIDLIHKNYRKLCNLLIDVEEWG---QVVIISMLTRYART 249
Score = 130 (50.8 bits), Expect = 3.0e-15, Sum P(3) = 3.0e-15
Identities = 54/222 (24%), Positives = 93/222 (41%)
Query: 250 LLNAPSTAVIYECAGTLVSLSSAPTA-IRAAANTYSQLLLSQSDNNVKLIVLDRLNELRS 308
LL + S AV+ A L AP A + A +LL S S+ V+ +VL + +
Sbjct: 312 LLQSRSAAVVMAVAQLYFHL--APKAEVGVIAKALVRLLRSHSE--VQYVVLQNVATMSI 367
Query: 309 SHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQSGEL 368
R + + P I+ L+++ L NI T +
Sbjct: 368 KRRGMFEPYLKSFYIRSTDPT-QIKILKLEVLTNLANETNIPTVLREFQ-----TYIRSM 421
Query: 369 EKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVREIIEMNPK 428
+K ++ IQAI CA V T ++ L+ L + + + ++ ++++++M P
Sbjct: 422 DK--DFVAATIQAIGRCATNIGRVRDTCLNGLVQLLSNRDELVVAESVVVIKKLLQMQPA 479
Query: 429 LRVSII---TRLLDNFYQIRAARVCTCALWIIGEYCQSLSEV 467
II +L DN Q+ AR LW+IGEYC+ + +
Sbjct: 480 QHGEIIKHLAKLTDNI-QVPMARASI--LWLIGEYCEHVPRI 518
Score = 38 (18.4 bits), Expect = 3.0e-15, Sum P(3) = 3.0e-15
Identities = 12/46 (26%), Positives = 17/46 (36%)
Query: 485 SVSEEGEDTDSSKKXXXXXXXXXXXXRRPAVLADGTYATQSAASET 530
S S+EG D+ SS PA + T + +A T
Sbjct: 758 SSSDEGSDSSSSSSESEMTSESEEEQLEPASWSRKTPPSSKSAPAT 803
>UNIPROTKB|B7ZKS0 [details] [associations]
symbol:AP3B2 "AP-3 complex subunit beta-2" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030123 "AP-3 adaptor complex" evidence=IEA]
[GO:0044431 "Golgi apparatus part" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR026739 InterPro:IPR026740 Pfam:PF01602
PIRSF:PIRSF037096 InterPro:IPR013041 InterPro:IPR008153
GO:GO:0005634 GO:GO:0005794 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
PANTHER:PTHR11134 SUPFAM:SSF49348 Gene3D:2.60.40.1230 GO:GO:0044431
HOVERGEN:HBG050519 GO:GO:0030123 PANTHER:PTHR11134:SF1
UniGene:Hs.199593 HGNC:HGNC:567 OMA:ANLGRVP EMBL:AC105339
EMBL:FJ695193 EMBL:BC143346 IPI:IPI01015491 SMR:B7ZKS0
STRING:B7ZKS0 Ensembl:ENST00000535359 UCSC:uc010uoi.2
Uniprot:B7ZKS0
Length = 1101
Score = 164 (62.8 bits), Expect = 3.2e-15, Sum P(3) = 3.2e-15
Identities = 57/225 (25%), Positives = 112/225 (49%)
Query: 20 NEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLE 79
+++KE L+ N K++AMK+ + ++ G+ LF +V+ V ++ ++KL+ +YL
Sbjct: 40 DDLKEMLDTNKDSLKLEAMKRIVAMIARGKNASDLFPAVVKNVA-CKNIEVKKLVYVYL- 97
Query: 80 IIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
+ + + + +L + L+ PN+ IR LR L + I+ ++ ++ +
Sbjct: 98 -VRYAEEQQDLA---LLSISTFQRGLKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEA 153
Query: 140 LQHRHPYIRRNAILAVMAIYKLP--QGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLF- 196
PY+R+ A A+ +Y L Q +QL+ E+IEK+L+ + A + +M F
Sbjct: 154 ASDMSPYVRKTAAHAIPKLYSLDSDQKDQLI----EVIEKLLADKTTLVA--GSVVMAFE 207
Query: 197 -TCDQDRAI---NY--LLTHVDRVSEWGELLQMVVLELIRKVCRT 235
C + + NY L + V EWG Q+V++ ++ + RT
Sbjct: 208 EVCPERIDLIHKNYRKLCNLLIDVEEWG---QVVIISMLTRYART 249
Score = 130 (50.8 bits), Expect = 3.2e-15, Sum P(3) = 3.2e-15
Identities = 54/222 (24%), Positives = 93/222 (41%)
Query: 250 LLNAPSTAVIYECAGTLVSLSSAPTA-IRAAANTYSQLLLSQSDNNVKLIVLDRLNELRS 308
LL + S AV+ A L AP A + A +LL S S+ V+ +VL + +
Sbjct: 312 LLQSRSAAVVMAVAQLYFHL--APKAEVGVIAKALVRLLRSHSE--VQYVVLQNVATMSI 367
Query: 309 SHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQSGEL 368
R + + P I+ L+++ L NI T +
Sbjct: 368 KRRGMFEPYLKSFYIRSTDPT-QIKILKLEVLTNLANETNIPTVLREFQ-----TYIRSM 421
Query: 369 EKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVREIIEMNPK 428
+K ++ IQAI CA V T ++ L+ L + + + ++ ++++++M P
Sbjct: 422 DK--DFVAATIQAIGRCATNIGRVRDTCLNGLVQLLSNRDELVVAESVVVIKKLLQMQPA 479
Query: 429 LRVSII---TRLLDNFYQIRAARVCTCALWIIGEYCQSLSEV 467
II +L DN Q+ AR LW+IGEYC+ + +
Sbjct: 480 QHGEIIKHLAKLTDNI-QVPMARASI--LWLIGEYCEHVPRI 518
Score = 38 (18.4 bits), Expect = 3.2e-15, Sum P(3) = 3.2e-15
Identities = 12/46 (26%), Positives = 17/46 (36%)
Query: 485 SVSEEGEDTDSSKKXXXXXXXXXXXXRRPAVLADGTYATQSAASET 530
S S+EG D+ SS PA + T + +A T
Sbjct: 777 SSSDEGSDSSSSSSESEMTSESEEEQLEPASWSRKTPPSSKSAPAT 822
>UNIPROTKB|C9J1E7 [details] [associations]
symbol:AP1B1 "AP-1 complex subunit beta-1" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 PIRSF:PIRSF002291 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0030117
GO:GO:0016192 GO:GO:0008565 HOGENOM:HOG000163270 PANTHER:PTHR11134
EMBL:AC000041 EMBL:AC002059 HGNC:HGNC:554 ChiTaRS:AP1B1
IPI:IPI00946351 ProteinModelPortal:C9J1E7 SMR:C9J1E7 STRING:C9J1E7
PRIDE:C9J1E7 Ensembl:ENST00000421126 ArrayExpress:C9J1E7
Bgee:C9J1E7 Uniprot:C9J1E7
Length = 578
Score = 226 (84.6 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 99/470 (21%), Positives = 200/470 (42%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
E+K L + K +A+KK I + G+ + LF +V + +++ ++KL+ LYL
Sbjct: 17 ELKAELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVN-CMQTDNLELKKLVYLYL-- 73
Query: 81 IDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
AK + P+M ++ N + + PN IR + +R + + +I E L + +
Sbjct: 74 --MNYAKSQ--PDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKC 129
Query: 140 LQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIE-KVLSTEQDPSAKRNAFLMLFTC 198
L+ PY+R+ A + V ++ + QL+ D + K L ++ +P NA L
Sbjct: 130 LKDEDPYVRKTAAVCVAKLHDI--NAQLVEDQGFLDTLKDLISDSNPMVVANAVAALSEI 187
Query: 199 DQD-----------RAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXXXX 247
+ ++IN LLT ++ +EWG Q+ +L+ + +
Sbjct: 188 AESHPSSNLLDLNPQSINKLLTALNECTEWG---QIFILDCLANYMPKDDREAQSICERV 244
Query: 248 XSLLNAPSTAVIYECAGTLVS--------LSSAPTAIRAAANTYSQLLLSQSDNNVKLIV 299
L+ ++AV+ L+ L T ++ A LL ++ + ++ +
Sbjct: 245 TPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYGTLLKKLAPPLVTLLSAEPE--LQYVA 302
Query: 300 LDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXX 359
L +N + +I+ + N P + ++ + LDI++ L + NI
Sbjct: 303 LRNINLIVQKRPEILKHEMKVFFVKYNDP-IYVKLEKLDIMIRLASQANI-------AQV 354
Query: 360 XXXTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAI-DVIIF 418
+ E + ++ + ++AI CAIK + A V L+D + + V + + I+
Sbjct: 355 LAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLI-QTKVNYVVQEAIVV 413
Query: 419 VREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVE 468
+++I P S+I L +N + +WI+GEY + + +
Sbjct: 414 IKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDNAD 463
>UNIPROTKB|G3X7G4 [details] [associations]
symbol:AP2B1 "AP-2 complex subunit beta" species:9913 "Bos
taurus" [GO:0030117 "membrane coat" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 PIRSF:PIRSF002291 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0030117 GO:GO:0016192
GO:GO:0008565 PANTHER:PTHR11134 GeneTree:ENSGT00530000063138
OMA:YDISATM EMBL:DAAA02048460 Ensembl:ENSBTAT00000027078
Uniprot:G3X7G4
Length = 598
Score = 224 (83.9 bits), Expect = 6.3e-15, P = 6.3e-15
Identities = 100/471 (21%), Positives = 198/471 (42%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
E+K L + +A+KK I + G+ + LF +V + +++ ++KL+ LYL
Sbjct: 17 ELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVN-CMQTDNLELKKLVYLYL-- 73
Query: 81 IDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
AK + P+M ++ N + + PN IR + +R + + +I E L + +
Sbjct: 74 --MNYAKSQ--PDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKC 129
Query: 140 LQHRHPYIRRNAILAVMAIYKL------PQG-----EQLLVDA-PEMIEKVLSTEQDPSA 187
L+ PY+R+ A + V ++ + QG L+ D+ P ++ ++ + S
Sbjct: 130 LKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALSEISE 189
Query: 188 KRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXXXX 247
+L Q+ IN LLT ++ +EWG Q+ +L+ + +
Sbjct: 190 SHPNSNLLDLNPQN--INKLLTALNECTEWG---QIFILDCLSNYNPKDDREAQSICERV 244
Query: 248 XSLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLL---------LSQSDNNVKLI 298
L+ ++AV+ L+ + ++ Y+ LL L + V+ +
Sbjct: 245 TPRLSHANSAVVLSAVKVLMKFLEL---LPKESDYYNMLLKKLAPPLVTLLSGEPEVQYV 301
Query: 299 VLDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXX 358
L +N + +I+ I N P + ++ + LDI++ L + NI
Sbjct: 302 ALRNINLIVQKRPEILKQEIKVFFVKYNDP-IYVKLEKLDIMIRLASQANI-------AQ 353
Query: 359 XXXXTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAI-DVII 417
+ E + ++ + ++AI CAIK + A V L+D + + V + + I+
Sbjct: 354 VLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLI-QTKVNYVVQEAIV 412
Query: 418 FVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVE 468
+R+I P SII L +N + +WI+GEY + + +
Sbjct: 413 VIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNAD 463
>MGI|MGI:1096368 [details] [associations]
symbol:Ap1b1 "adaptor protein complex AP-1, beta 1 subunit"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005802 "trans-Golgi network" evidence=TAS] [GO:0006810
"transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=TAS] [GO:0006897 "endocytosis" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=TAS] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA] [GO:0048268 "clathrin coat assembly"
evidence=ISO] InterPro:IPR002553 InterPro:IPR008152
InterPro:IPR009028 InterPro:IPR013037 InterPro:IPR015151
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 Pfam:PF02883 Pfam:PF09066 PIRSF:PIRSF002291
SMART:SM00809 SMART:SM01020 InterPro:IPR013041 MGI:MGI:1096368
GO:GO:0005794 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565 EMBL:CH466574
GO:GO:0006897 GO:GO:0005802 eggNOG:COG5096 HOGENOM:HOG000163270
HOVERGEN:HBG050515 GO:GO:0030131 GO:GO:0030665 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 CTD:162 KO:K12392 OMA:PGNPSCT
ChiTaRS:AP1B1 EMBL:Y07919 EMBL:AK159273 EMBL:BC008513
IPI:IPI00346965 RefSeq:NP_031480.2 UniGene:Mm.274816
ProteinModelPortal:O35643 SMR:O35643 IntAct:O35643 STRING:O35643
PhosphoSite:O35643 PaxDb:O35643 PRIDE:O35643
Ensembl:ENSMUST00000009234 GeneID:11764 KEGG:mmu:11764
GeneTree:ENSGT00530000063138 NextBio:279521 Bgee:O35643
CleanEx:MM_AP1B1 Genevestigator:O35643 Uniprot:O35643
Length = 943
Score = 227 (85.0 bits), Expect = 6.5e-15, P = 6.5e-15
Identities = 99/470 (21%), Positives = 200/470 (42%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
E+K L + K +A+KK I + G+ + LF +V + +++ ++KL+ LYL
Sbjct: 17 ELKAELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVN-CMQTDNLELKKLVYLYL-- 73
Query: 81 IDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
AK + P+M ++ N + + PN IR + +R + + +I E L + +
Sbjct: 74 --MNYAKSQ--PDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKC 129
Query: 140 LQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIE-KVLSTEQDPSAKRNAFLMLFTC 198
L+ PY+R+ A + V ++ + QL+ D + K L ++ +P NA L
Sbjct: 130 LKDEDPYVRKTAAVCVAKLHDI--NAQLVEDQGFLDTLKDLISDSNPMVVANAVAALSEI 187
Query: 199 DQD-----------RAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXXXX 247
+ ++IN LLT ++ +EWG Q+ +L+ + +
Sbjct: 188 AESHPSSNLLDLNPQSINKLLTALNECTEWG---QIFILDCLANYMPKDDREAQSICERV 244
Query: 248 XSLLNAPSTAVIYECAGTLVS--------LSSAPTAIRAAANTYSQLLLSQSDNNVKLIV 299
L+ ++AV+ L+ L T ++ A LL ++ + ++ +
Sbjct: 245 TPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYATLLKKLAPPLVTLLSAEPE--LQYVA 302
Query: 300 LDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXX 359
L +N + +I+ + N P + ++ + LDI++ L + NI
Sbjct: 303 LRNINLIVQKRPEILKHEMKVFFVKYNDP-IYVKLEKLDIMIRLASQANI-------AQV 354
Query: 360 XXXTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAI-DVIIF 418
+ E + ++ + ++AI CAIK + A V L+D + + V + + I+
Sbjct: 355 LAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLI-QTKVNYVVQEAIVV 413
Query: 419 VREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVE 468
+++I P S+I L +N + +WI+GEY + + +
Sbjct: 414 IKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDNAD 463
>ZFIN|ZDB-GENE-061025-1 [details] [associations]
symbol:ap1b1 "adaptor-related protein complex 1, beta
1 subunit" species:7955 "Danio rerio" [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0030131 "clathrin adaptor complex" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013037 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883
Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020
InterPro:IPR013041 ZFIN:ZDB-GENE-061025-1 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 eggNOG:COG5096 HOGENOM:HOG000163270
HOVERGEN:HBG050515 OrthoDB:EOG4PG607 GO:GO:0030131
Gene3D:2.60.40.1150 Gene3D:3.30.310.10 InterPro:IPR012295
PANTHER:PTHR11134 SUPFAM:SSF55711 SUPFAM:SSF49348 CTD:162 KO:K12392
OMA:PGNPSCT GeneTree:ENSGT00530000063138 EMBL:BX664747
IPI:IPI00897502 RefSeq:NP_001122002.1 UniGene:Dr.31764 SMR:A5PMS9
Ensembl:ENSDART00000022518 Ensembl:ENSDART00000137128 GeneID:562166
KEGG:dre:562166 NextBio:20884280 Uniprot:A5PMS9
Length = 947
Score = 227 (85.0 bits), Expect = 6.5e-15, P = 6.5e-15
Identities = 97/468 (20%), Positives = 197/468 (42%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
E+K L + K +A+KK I + G+ + LF +V + +++ ++KL+ LYL
Sbjct: 17 ELKAELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVN-CMQTDNLELKKLVYLYL-- 73
Query: 81 IDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
AK + P+M ++ N + + PN IR + +R + + +I E L + +
Sbjct: 74 --MNYAKSQ--PDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKC 129
Query: 140 LQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIE-KVLSTEQDPSAKRNAFLMLFTC 198
L+ PY+R+ A + V ++ + QL+ D + K L ++ +P NA L
Sbjct: 130 LKDEDPYVRKTAAVCVAKLHDI--NAQLVEDQGFLDTLKDLISDSNPMVVANAVAALSEI 187
Query: 199 DQD-----------RAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXXXX 247
+ + IN LLT ++ +EWG Q+ +L+ + +
Sbjct: 188 AESHPNSNLLDLNPQTINKLLTALNECTEWG---QIFILDCLANYTPRDDRESQSICERV 244
Query: 248 XSLLNAPSTAVIYECAGTLVS-LSSAPTAIRAAANTYSQLL-----LSQSDNNVKLIVLD 301
L+ ++AV+ L+ + P + +L L ++ ++ + L
Sbjct: 245 TPRLSHANSAVVLSAVKVLMKFMEMLPKDLDYYGTLLKKLAPPLVTLLSAEPELQYVALR 304
Query: 302 RLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXX 361
+N + +I+ + N P + ++ + LDI++ L + NI
Sbjct: 305 NINLIVQKRPEILKHEMKVFFVKYNDP-IYVKLEKLDIMIRLASQANI-------AQVLA 356
Query: 362 XTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAI-DVIIFVR 420
+ E + ++ + ++AI CAIK + A V L+D + + V + + I+ ++
Sbjct: 357 ELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLI-QTKVNYVVQEAIVVIK 415
Query: 421 EIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVE 468
+I P S+I L +N + +WI+GEY + + +
Sbjct: 416 DIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDNAD 463
>UNIPROTKB|F1NCR9 [details] [associations]
symbol:AP1B1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 GeneTree:ENSGT00530000063138
EMBL:AADN02050473 EMBL:AADN02050474 EMBL:AADN02050475
IPI:IPI00571321 Ensembl:ENSGALT00000038029 Uniprot:F1NCR9
Length = 881
Score = 226 (84.6 bits), Expect = 7.5e-15, P = 7.5e-15
Identities = 99/470 (21%), Positives = 200/470 (42%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
E+K L + K +A+KK I + G+ + LF +V + +++ ++KL+ LYL
Sbjct: 5 ELKAELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVN-CMQTDNLELKKLVYLYL-- 61
Query: 81 IDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
AK + P+M ++ N + + PN IR + +R + + +I E L + +
Sbjct: 62 --MNYAKSQ--PDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKC 117
Query: 140 LQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIE-KVLSTEQDPSAKRNAFLMLFTC 198
L+ PY+R+ A + V ++ + QL+ D + K L ++ +P NA L
Sbjct: 118 LKDEDPYVRKTAAVCVAKLHDI--NAQLVEDQGFLDTLKDLISDSNPMVVANAVAALSEI 175
Query: 199 DQD-----------RAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXXXX 247
+ ++IN LLT ++ +EWG Q+ +L+ + +
Sbjct: 176 AESHPSSNLLDLNPQSINKLLTALNECTEWG---QIFILDCLANYMPKDDREAQSICERV 232
Query: 248 XSLLNAPSTAVIYECAGTLVS--------LSSAPTAIRAAANTYSQLLLSQSDNNVKLIV 299
L+ ++AV+ L+ L T ++ A LL ++ + ++ +
Sbjct: 233 TPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYGTLLKKLAPPLVTLLSAEPE--LQYVA 290
Query: 300 LDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXX 359
L +N + +I+ + N P + ++ + LDI++ L + NI
Sbjct: 291 LRNINLIVQKRPEILKHEMKVFFVKYNDP-IYVKLEKLDIMIRLASQANI-------AQV 342
Query: 360 XXXTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAI-DVIIF 418
+ E + ++ + ++AI CAIK + A V L+D + + V + + I+
Sbjct: 343 LAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLI-QTKVNYVVQEAIVV 401
Query: 419 VREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVE 468
+++I P S+I L +N + +WI+GEY + + +
Sbjct: 402 IKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDNAD 451
>UNIPROTKB|F1NCI1 [details] [associations]
symbol:AP1B1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 OMA:PGNPSCT
GeneTree:ENSGT00530000063138 EMBL:AADN02050473 EMBL:AADN02050474
EMBL:AADN02050475 IPI:IPI00820134 Ensembl:ENSGALT00000013205
Uniprot:F1NCI1
Length = 922
Score = 226 (84.6 bits), Expect = 8.0e-15, P = 8.0e-15
Identities = 99/470 (21%), Positives = 200/470 (42%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
E+K L + K +A+KK I + G+ + LF +V + +++ ++KL+ LYL
Sbjct: 5 ELKAELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVN-CMQTDNLELKKLVYLYL-- 61
Query: 81 IDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
AK + P+M ++ N + + PN IR + +R + + +I E L + +
Sbjct: 62 --MNYAKSQ--PDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKC 117
Query: 140 LQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIE-KVLSTEQDPSAKRNAFLMLFTC 198
L+ PY+R+ A + V ++ + QL+ D + K L ++ +P NA L
Sbjct: 118 LKDEDPYVRKTAAVCVAKLHDI--NAQLVEDQGFLDTLKDLISDSNPMVVANAVAALSEI 175
Query: 199 DQD-----------RAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXXXX 247
+ ++IN LLT ++ +EWG Q+ +L+ + +
Sbjct: 176 AESHPSSNLLDLNPQSINKLLTALNECTEWG---QIFILDCLANYMPKDDREAQSICERV 232
Query: 248 XSLLNAPSTAVIYECAGTLVS--------LSSAPTAIRAAANTYSQLLLSQSDNNVKLIV 299
L+ ++AV+ L+ L T ++ A LL ++ + ++ +
Sbjct: 233 TPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYGTLLKKLAPPLVTLLSAEPE--LQYVA 290
Query: 300 LDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXX 359
L +N + +I+ + N P + ++ + LDI++ L + NI
Sbjct: 291 LRNINLIVQKRPEILKHEMKVFFVKYNDP-IYVKLEKLDIMIRLASQANI-------AQV 342
Query: 360 XXXTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAI-DVIIF 418
+ E + ++ + ++AI CAIK + A V L+D + + V + + I+
Sbjct: 343 LAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLI-QTKVNYVVQEAIVV 401
Query: 419 VREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVE 468
+++I P S+I L +N + +WI+GEY + + +
Sbjct: 402 IKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDNAD 451
>UNIPROTKB|F1S182 [details] [associations]
symbol:LOC100517121 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR013037 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883
PIRSF:PIRSF002291 SMART:SM00809 InterPro:IPR013041 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 KO:K11825 GO:GO:0030131 Gene3D:2.60.40.1150
PANTHER:PTHR11134 SUPFAM:SSF49348 GeneTree:ENSGT00530000063138
OMA:YDISATM EMBL:CU927946 RefSeq:XP_003131766.3
Ensembl:ENSSSCT00000019278 GeneID:100517121 KEGG:ssc:100517121
Uniprot:F1S182
Length = 819
Score = 224 (83.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 102/472 (21%), Positives = 199/472 (42%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
E+K L + +A+KK I + G+ + LF +V + +++ ++KL+ LYL
Sbjct: 17 ELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVN-CMQTDNLELKKLVYLYL-- 73
Query: 81 IDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
AK + P+M ++ N + + PN IR + +R + + +I E L + +
Sbjct: 74 --MNYAKSQ--PDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKC 129
Query: 140 LQHRHPYIRRNAILAVMAIYKL------PQG-----EQLLVDA-PEMIEKVLSTEQDPSA 187
L+ PY+R+ A + V ++ + QG L+ D+ P ++ ++ + S
Sbjct: 130 LKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALSEISE 189
Query: 188 KRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXXXX 247
+L Q+ IN LLT ++ +EWG Q+ +L+ + +
Sbjct: 190 SHPNSNLLDLNPQN--INKLLTALNECTEWG---QIFILDCLSNYNPKDDREAQSICERV 244
Query: 248 XSLLNAPSTAVIYECAGTLVS-LSSAPTAIRAAANTYSQLL---------LSQSDNNVKL 297
L+ ++AV+ L+ L P ++ Y+ LL L + V+
Sbjct: 245 TPRLSHANSAVVLSAVKVLMKFLELLPND----SDYYNMLLKKLAPPLVTLLSGEPEVQY 300
Query: 298 IVLDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXX 357
+ L +N + +I+ I N P + ++ + LDI++ L + NI
Sbjct: 301 VALRNINLIVQKRPEILKQEIKVFFVKYNDP-IYVKLEKLDIMIRLASQANI-------A 352
Query: 358 XXXXXTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAI-DVI 416
+ E + ++ + ++AI CAIK + A V L+D + + V + + I
Sbjct: 353 QVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLI-QTKVNYVVQEAI 411
Query: 417 IFVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVE 468
+ +R+I P SII L +N + +WI+GEY + + +
Sbjct: 412 VVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNAD 463
>UNIPROTKB|P63009 [details] [associations]
symbol:AP2B1 "AP-2 complex subunit beta" species:9913 "Bos
taurus" [GO:0005215 "transporter activity" evidence=TAS]
[GO:0005905 "coated pit" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR002553 InterPro:IPR008152
InterPro:IPR009028 InterPro:IPR013037 InterPro:IPR015151
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 Pfam:PF02883 Pfam:PF09066 PIRSF:PIRSF002291
SMART:SM00809 SMART:SM01020 InterPro:IPR013041 GO:GO:0005886
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 GO:GO:0005905 GO:GO:0005215
UniGene:Bt.88309 HOGENOM:HOG000163270 HOVERGEN:HBG050515
GO:GO:0030131 Gene3D:2.60.40.1150 Gene3D:3.30.310.10
InterPro:IPR012295 PANTHER:PTHR11134 SUPFAM:SSF55711
SUPFAM:SSF49348 EMBL:M34177 IPI:IPI00845219 PIR:B35553
ProteinModelPortal:P63009 SMR:P63009 DIP:DIP-44826N STRING:P63009
Uniprot:P63009
Length = 937
Score = 224 (83.9 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 100/471 (21%), Positives = 198/471 (42%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
E+K L + +A+KK I + G+ + LF +V + +++ ++KL+ LYL
Sbjct: 17 ELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVN-CMQTDNLELKKLVYLYL-- 73
Query: 81 IDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
AK + P+M ++ N + + PN IR + +R + + +I E L + +
Sbjct: 74 --MNYAKSQ--PDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKC 129
Query: 140 LQHRHPYIRRNAILAVMAIYKL------PQG-----EQLLVDA-PEMIEKVLSTEQDPSA 187
L+ PY+R+ A + V ++ + QG L+ D+ P ++ ++ + S
Sbjct: 130 LKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALSEISE 189
Query: 188 KRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXXXX 247
+L Q+ IN LLT ++ +EWG Q+ +L+ + +
Sbjct: 190 SHPNSNLLDLNPQN--INKLLTALNECTEWG---QIFILDCLSNYNPKDDREAQSICERV 244
Query: 248 XSLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLL---------LSQSDNNVKLI 298
L+ ++AV+ L+ + ++ Y+ LL L + V+ +
Sbjct: 245 TPRLSHANSAVVLSAVKVLMKFLEL---LPKESDYYNMLLKKLAPPLVTLLSGEPEVQYV 301
Query: 299 VLDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXX 358
L +N + +I+ I N P + ++ + LDI++ L + NI
Sbjct: 302 ALRNINLIVQKRPEILKQEIKVFFVKYNDP-IYVKLEKLDIMIRLASQANI-------AQ 353
Query: 359 XXXXTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAI-DVII 417
+ E + ++ + ++AI CAIK + A V L+D + + V + + I+
Sbjct: 354 VLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLI-QTKVNYVVQEAIV 412
Query: 418 FVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVE 468
+R+I P SII L +N + +WI+GEY + + +
Sbjct: 413 VIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNAD 463
>UNIPROTKB|I3L6Y6 [details] [associations]
symbol:AP2B1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 GeneTree:ENSGT00530000063138
OMA:DCHLNAD Ensembl:ENSSSCT00000025334 Uniprot:I3L6Y6
Length = 939
Score = 224 (83.9 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 102/472 (21%), Positives = 199/472 (42%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
E+K L + +A+KK I + G+ + LF +V + +++ ++KL+ LYL
Sbjct: 5 ELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVN-CMQTDNLELKKLVYLYL-- 61
Query: 81 IDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
AK + P+M ++ N + + PN IR + +R + + +I E L + +
Sbjct: 62 --MNYAKSQ--PDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKC 117
Query: 140 LQHRHPYIRRNAILAVMAIYKL------PQG-----EQLLVDA-PEMIEKVLSTEQDPSA 187
L+ PY+R+ A + V ++ + QG L+ D+ P ++ ++ + S
Sbjct: 118 LKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALSEISE 177
Query: 188 KRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXXXX 247
+L Q+ IN LLT ++ +EWG Q+ +L+ + +
Sbjct: 178 SHPNSNLLDLNPQN--INKLLTALNECTEWG---QIFILDCLSNYNPKDDREAQSICERV 232
Query: 248 XSLLNAPSTAVIYECAGTLVS-LSSAPTAIRAAANTYSQLL---------LSQSDNNVKL 297
L+ ++AV+ L+ L P ++ Y+ LL L + V+
Sbjct: 233 TPRLSHANSAVVLSAVKVLMKFLELLPND----SDYYNMLLKKLAPPLVTLLSGEPEVQY 288
Query: 298 IVLDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXX 357
+ L +N + +I+ I N P + ++ + LDI++ L + NI
Sbjct: 289 VALRNINLIVQKRPEILKQEIKVFFVKYNDP-IYVKLEKLDIMIRLASQANI-------A 340
Query: 358 XXXXXTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAI-DVI 416
+ E + ++ + ++AI CAIK + A V L+D + + V + + I
Sbjct: 341 QVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLI-QTKVNYVVQEAI 399
Query: 417 IFVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVE 468
+ +R+I P SII L +N + +WI+GEY + + +
Sbjct: 400 VVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNAD 451
>UNIPROTKB|Q08DS7 [details] [associations]
symbol:AP2B1 "AP-1 complex subunit beta-1" species:9913
"Bos taurus" [GO:0030665 "clathrin-coated vesicle membrane"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0030131 "clathrin
adaptor complex" evidence=IEA] [GO:0008565 "protein transporter
activity" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] InterPro:IPR002553 InterPro:IPR008152
InterPro:IPR009028 InterPro:IPR013037 InterPro:IPR015151
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 Pfam:PF02883 Pfam:PF09066 PIRSF:PIRSF002291
SMART:SM00809 SMART:SM01020 InterPro:IPR013041 GO:GO:0005794
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0008565 GO:GO:0006897 EMBL:BC123583 IPI:IPI00696360
RefSeq:NP_001068593.1 UniGene:Bt.88309 ProteinModelPortal:Q08DS7
SMR:Q08DS7 STRING:Q08DS7 PRIDE:Q08DS7 GeneID:282183 KEGG:bta:282183
CTD:163 eggNOG:COG5096 HOGENOM:HOG000163270 HOVERGEN:HBG050515
InParanoid:Q08DS7 KO:K11825 OrthoDB:EOG4PG607 NextBio:20806011
GO:GO:0030131 GO:GO:0030665 Gene3D:2.60.40.1150 Gene3D:3.30.310.10
InterPro:IPR012295 PANTHER:PTHR11134 SUPFAM:SSF55711
SUPFAM:SSF49348 Uniprot:Q08DS7
Length = 951
Score = 224 (83.9 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 100/471 (21%), Positives = 198/471 (42%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
E+K L + +A+KK I + G+ + LF +V + +++ ++KL+ LYL
Sbjct: 17 ELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVN-CMQTDNLELKKLVYLYL-- 73
Query: 81 IDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
AK + P+M ++ N + + PN IR + +R + + +I E L + +
Sbjct: 74 --MNYAKSQ--PDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKC 129
Query: 140 LQHRHPYIRRNAILAVMAIYKL------PQG-----EQLLVDA-PEMIEKVLSTEQDPSA 187
L+ PY+R+ A + V ++ + QG L+ D+ P ++ ++ + S
Sbjct: 130 LKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALSEISE 189
Query: 188 KRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXXXX 247
+L Q+ IN LLT ++ +EWG Q+ +L+ + +
Sbjct: 190 SHPNSNLLDLNPQN--INKLLTALNECTEWG---QIFILDCLSNYNPKDDREAQSICERV 244
Query: 248 XSLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLL---------LSQSDNNVKLI 298
L+ ++AV+ L+ + ++ Y+ LL L + V+ +
Sbjct: 245 TPRLSHANSAVVLSAVKVLMKFLEL---LPKESDYYNMLLKKLAPPLVTLLSGEPEVQYV 301
Query: 299 VLDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXX 358
L +N + +I+ I N P + ++ + LDI++ L + NI
Sbjct: 302 ALRNINLIVQKRPEILKQEIKVFFVKYNDP-IYVKLEKLDIMIRLASQANI-------AQ 353
Query: 359 XXXXTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAI-DVII 417
+ E + ++ + ++AI CAIK + A V L+D + + V + + I+
Sbjct: 354 VLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLI-QTKVNYVVQEAIV 412
Query: 418 FVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVE 468
+R+I P SII L +N + +WI+GEY + + +
Sbjct: 413 VIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNAD 463
>UNIPROTKB|P63010 [details] [associations]
symbol:AP2B1 "AP-2 complex subunit beta" species:9606 "Homo
sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0005802 "trans-Golgi network" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0048268 "clathrin coat
assembly" evidence=IEA] [GO:0005905 "coated pit" evidence=IEA]
[GO:0030276 "clathrin binding" evidence=IPI] [GO:0005829 "cytosol"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007173 "epidermal growth factor receptor signaling pathway"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0007411 "axon guidance" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0019886 "antigen processing and
presentation of exogenous peptide antigen via MHC class II"
evidence=TAS] [GO:0030666 "endocytic vesicle membrane"
evidence=TAS] [GO:0030669 "clathrin-coated endocytic vesicle
membrane" evidence=TAS] [GO:0042059 "negative regulation of
epidermal growth factor receptor signaling pathway" evidence=TAS]
[GO:0048011 "neurotrophin TRK receptor signaling pathway"
evidence=TAS] [GO:0050690 "regulation of defense response to virus
by virus" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
Reactome:REACT_13685 InterPro:IPR002553 InterPro:IPR008152
InterPro:IPR009028 InterPro:IPR013037 InterPro:IPR015151
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 Pfam:PF02883 Pfam:PF09066 PIRSF:PIRSF002291
SMART:SM00809 SMART:SM01020 InterPro:IPR013041 EMBL:M34175
GO:GO:0005829 GO:GO:0005886 Reactome:REACT_111045
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0007411 GO:GO:0007173 GO:GO:0048011 GO:GO:0006886
GO:GO:0050690 GO:GO:0016032 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0030669 GO:GO:0019886 GO:GO:0008565
GO:GO:0007268 GO:GO:0005905 GO:GO:0005802 GO:GO:0048488
GO:GO:0007269 GO:GO:0048268 CTD:163 eggNOG:COG5096
HOGENOM:HOG000163270 HOVERGEN:HBG050515 KO:K11825 OrthoDB:EOG4PG607
GO:GO:0030131 Gene3D:2.60.40.1150 Gene3D:3.30.310.10
InterPro:IPR012295 PANTHER:PTHR11134 SUPFAM:SSF55711
SUPFAM:SSF49348 GO:GO:0042059 PDB:2JKR PDB:2JKT PDBsum:2JKR
PDBsum:2JKT PDB:2VGL PDB:2XA7 PDBsum:2VGL PDBsum:2XA7 EMBL:AC006237
EMBL:CH471147 EMBL:BC006201 IPI:IPI00784156 IPI:IPI00784366
PIR:A35553 RefSeq:NP_001025177.1 RefSeq:NP_001273.1
UniGene:Hs.514819 PDB:1E42 PDB:2G30 PDB:2IV8 PDB:2IV9 PDBsum:1E42
PDBsum:2G30 PDBsum:2IV8 PDBsum:2IV9 ProteinModelPortal:P63010
SMR:P63010 DIP:DIP-33098N IntAct:P63010 MINT:MINT-256705
STRING:P63010 PhosphoSite:P63010 DMDM:51702211 PaxDb:P63010
PRIDE:P63010 DNASU:163 Ensembl:ENST00000262325
Ensembl:ENST00000312678 Ensembl:ENST00000537622 GeneID:163
KEGG:hsa:163 UCSC:uc002hjq.3 UCSC:uc002hjr.3 GeneCards:GC17P033914
HGNC:HGNC:563 HPA:CAB017631 MIM:601025 neXtProt:NX_P63010
PharmGKB:PA24854 OMA:DCHLNAD ChiTaRS:AP2B1 EvolutionaryTrace:P63010
GenomeRNAi:163 NextBio:653 ArrayExpress:P63010 Bgee:P63010
CleanEx:HS_AP2B1 Genevestigator:P63010 GermOnline:ENSG00000006125
Uniprot:P63010
Length = 937
Score = 223 (83.6 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 100/471 (21%), Positives = 198/471 (42%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
E+K L + +A+KK I + G+ + LF +V + +++ ++KL+ LYL
Sbjct: 17 ELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVN-CMQTDNLELKKLVYLYL-- 73
Query: 81 IDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
AK + P+M ++ N + + PN IR + +R + + +I E L + +
Sbjct: 74 --MNYAKSQ--PDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKC 129
Query: 140 LQHRHPYIRRNAILAVMAIYKL------PQG-----EQLLVDA-PEMIEKVLSTEQDPSA 187
L+ PY+R+ A + V ++ + QG L+ D+ P ++ ++ + S
Sbjct: 130 LKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALSEISE 189
Query: 188 KRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXXXX 247
+L Q+ IN LLT ++ +EWG Q+ +L+ + +
Sbjct: 190 SHPNSNLLDLNPQN--INKLLTALNECTEWG---QIFILDCLSNYNPKDDREAQSICERV 244
Query: 248 XSLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLL---------LSQSDNNVKLI 298
L+ ++AV+ L+ + ++ Y+ LL L + V+ +
Sbjct: 245 TPRLSHANSAVVLSAVKVLMKFLEL---LPKDSDYYNMLLKKLAPPLVTLLSGEPEVQYV 301
Query: 299 VLDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXX 358
L +N + +I+ I N P + ++ + LDI++ L + NI
Sbjct: 302 ALRNINLIVQKRPEILKQEIKVFFVKYNDP-IYVKLEKLDIMIRLASQANI-------AQ 353
Query: 359 XXXXTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAI-DVII 417
+ E + ++ + ++AI CAIK + A V L+D + + V + + I+
Sbjct: 354 VLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLI-QTKVNYVVQEAIV 412
Query: 418 FVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVE 468
+R+I P SII L +N + +WI+GEY + + +
Sbjct: 413 VIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNAD 463
>MGI|MGI:1919020 [details] [associations]
symbol:Ap2b1 "adaptor-related protein complex 2, beta 1
subunit" species:10090 "Mus musculus" [GO:0005802 "trans-Golgi
network" evidence=ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005905 "coated pit" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0030118 "clathrin coat" evidence=ISO] [GO:0030131 "clathrin
adaptor complex" evidence=ISO] [GO:0030276 "clathrin binding"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0048268 "clathrin coat assembly" evidence=ISO]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013037 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883
Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020
InterPro:IPR013041 MGI:MGI:1919020 GO:GO:0005886 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565
GO:GO:0005905 GO:GO:0005802 GO:GO:0048488 GO:GO:0007269
GO:GO:0048268 CTD:163 eggNOG:COG5096 HOGENOM:HOG000163270
HOVERGEN:HBG050515 KO:K11825 OrthoDB:EOG4PG607 GO:GO:0030131
Gene3D:2.60.40.1150 Gene3D:3.30.310.10 InterPro:IPR012295
PANTHER:PTHR11134 SUPFAM:SSF55711 SUPFAM:SSF49348
GeneTree:ENSGT00530000063138 OMA:DCHLNAD ChiTaRS:AP2B1
EMBL:AK004975 EMBL:BC046772 IPI:IPI00119689 IPI:IPI00378063
RefSeq:NP_001030931.1 RefSeq:NP_082191.1 UniGene:Mm.39053
ProteinModelPortal:Q9DBG3 SMR:Q9DBG3 IntAct:Q9DBG3
MINT:MINT-1870047 STRING:Q9DBG3 PhosphoSite:Q9DBG3 PaxDb:Q9DBG3
PRIDE:Q9DBG3 Ensembl:ENSMUST00000018875 Ensembl:ENSMUST00000065692
GeneID:71770 KEGG:mmu:71770 UCSC:uc007kou.1 NextBio:334467
Bgee:Q9DBG3 CleanEx:MM_AP2B1 Genevestigator:Q9DBG3
GermOnline:ENSMUSG00000035152 Uniprot:Q9DBG3
Length = 937
Score = 223 (83.6 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 100/471 (21%), Positives = 198/471 (42%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
E+K L + +A+KK I + G+ + LF +V + +++ ++KL+ LYL
Sbjct: 17 ELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVN-CMQTDNLELKKLVYLYL-- 73
Query: 81 IDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
AK + P+M ++ N + + PN IR + +R + + +I E L + +
Sbjct: 74 --MNYAKSQ--PDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKC 129
Query: 140 LQHRHPYIRRNAILAVMAIYKL------PQG-----EQLLVDA-PEMIEKVLSTEQDPSA 187
L+ PY+R+ A + V ++ + QG L+ D+ P ++ ++ + S
Sbjct: 130 LKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALSEISE 189
Query: 188 KRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXXXX 247
+L Q+ IN LLT ++ +EWG Q+ +L+ + +
Sbjct: 190 SHPNSNLLDLNPQN--INKLLTALNECTEWG---QIFILDCLSNYNPKDDREAQSICERV 244
Query: 248 XSLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLL---------LSQSDNNVKLI 298
L+ ++AV+ L+ + ++ Y+ LL L + V+ +
Sbjct: 245 TPRLSHANSAVVLSAVKVLMKFLEL---LPKDSDYYNMLLKKLAPPLVTLLSGEPEVQYV 301
Query: 299 VLDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXX 358
L +N + +I+ I N P + ++ + LDI++ L + NI
Sbjct: 302 ALRNINLIVQKRPEILKQEIKVFFVKYNDP-IYVKLEKLDIMIRLASQANI-------AQ 353
Query: 359 XXXXTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAI-DVII 417
+ E + ++ + ++AI CAIK + A V L+D + + V + + I+
Sbjct: 354 VLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLI-QTKVNYVVQEAIV 412
Query: 418 FVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVE 468
+R+I P SII L +N + +WI+GEY + + +
Sbjct: 413 VIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNAD 463
>RGD|71048 [details] [associations]
symbol:Ap2b1 "adaptor-related protein complex 2, beta 1 subunit"
species:10116 "Rattus norvegicus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005802 "trans-Golgi network" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005905 "coated pit"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0030118 "clathrin coat" evidence=IDA] [GO:0030119
"AP-type membrane coat adaptor complex" evidence=TAS] [GO:0030131
"clathrin adaptor complex" evidence=IEA] [GO:0030276 "clathrin
binding" evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=IMP;IPI] [GO:0048268 "clathrin coat assembly" evidence=IDA]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013037 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883
Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020
InterPro:IPR013041 RGD:71048 GO:GO:0005886 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0032403
GO:GO:0008565 GO:GO:0005905 GO:GO:0005802 GO:GO:0030276
GO:GO:0030118 GO:GO:0048268 CTD:163 eggNOG:COG5096
HOGENOM:HOG000163270 HOVERGEN:HBG050515 KO:K11825 GO:GO:0030131
Gene3D:2.60.40.1150 Gene3D:3.30.310.10 InterPro:IPR012295
PANTHER:PTHR11134 SUPFAM:SSF55711 SUPFAM:SSF49348
GeneTree:ENSGT00530000063138 GO:GO:0030119 OMA:DCHLNAD EMBL:M34176
EMBL:M77246 IPI:IPI00231502 IPI:IPI00389753 PIR:C35553
RefSeq:NP_542150.1 RefSeq:XP_003750923.1 UniGene:Rn.56138 PDB:3H1Z
PDB:3HS9 PDBsum:3H1Z PDBsum:3HS9 ProteinModelPortal:P62944
SMR:P62944 MINT:MINT-122517 STRING:P62944 PhosphoSite:P62944
PRIDE:P62944 Ensembl:ENSRNOT00000013363 Ensembl:ENSRNOT00000013629
GeneID:100912146 GeneID:140670 KEGG:rno:100912146 KEGG:rno:140670
EvolutionaryTrace:P62944 NextBio:620655 ArrayExpress:P62944
Genevestigator:P62944 GermOnline:ENSRNOG00000009988 Uniprot:P62944
Length = 937
Score = 223 (83.6 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 100/471 (21%), Positives = 198/471 (42%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
E+K L + +A+KK I + G+ + LF +V + +++ ++KL+ LYL
Sbjct: 17 ELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVN-CMQTDNLELKKLVYLYL-- 73
Query: 81 IDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
AK + P+M ++ N + + PN IR + +R + + +I E L + +
Sbjct: 74 --MNYAKSQ--PDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKC 129
Query: 140 LQHRHPYIRRNAILAVMAIYKL------PQG-----EQLLVDA-PEMIEKVLSTEQDPSA 187
L+ PY+R+ A + V ++ + QG L+ D+ P ++ ++ + S
Sbjct: 130 LKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALSEISE 189
Query: 188 KRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXXXX 247
+L Q+ IN LLT ++ +EWG Q+ +L+ + +
Sbjct: 190 SHPNSNLLDLNPQN--INKLLTALNECTEWG---QIFILDCLSNYNPKDDREAQSICERV 244
Query: 248 XSLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLL---------LSQSDNNVKLI 298
L+ ++AV+ L+ + ++ Y+ LL L + V+ +
Sbjct: 245 TPRLSHANSAVVLSAVKVLMKFLEL---LPKDSDYYNMLLKKLAPPLVTLLSGEPEVQYV 301
Query: 299 VLDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXX 358
L +N + +I+ I N P + ++ + LDI++ L + NI
Sbjct: 302 ALRNINLIVQKRPEILKQEIKVFFVKYNDP-IYVKLEKLDIMIRLASQANI-------AQ 353
Query: 359 XXXXTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAI-DVII 417
+ E + ++ + ++AI CAIK + A V L+D + + V + + I+
Sbjct: 354 VLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLI-QTKVNYVVQEAIV 412
Query: 418 FVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVE 468
+R+I P SII L +N + +WI+GEY + + +
Sbjct: 413 VIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNAD 463
>UNIPROTKB|E1BXC1 [details] [associations]
symbol:AP2B1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 GeneTree:ENSGT00530000063138
EMBL:AADN02025947 EMBL:AADN02025948 EMBL:AADN02025949
IPI:IPI00821954 Ensembl:ENSGALT00000040164 ArrayExpress:E1BXC1
Uniprot:E1BXC1
Length = 938
Score = 223 (83.6 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 100/471 (21%), Positives = 198/471 (42%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
E+K L + +A+KK I + G+ + LF +V + +++ ++KL+ LYL
Sbjct: 17 ELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVN-CMQTDNLELKKLVYLYL-- 73
Query: 81 IDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
AK + P+M ++ N + + PN IR + +R + + +I E L + +
Sbjct: 74 --MNYAKSQ--PDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKC 129
Query: 140 LQHRHPYIRRNAILAVMAIYKL------PQG-----EQLLVDA-PEMIEKVLSTEQDPSA 187
L+ PY+R+ A + V ++ + QG L+ D+ P ++ ++ + S
Sbjct: 130 LKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALSEISE 189
Query: 188 KRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXXXX 247
+L Q+ IN LLT ++ +EWG Q+ +L+ + +
Sbjct: 190 SHPNSNLLDLNPQN--INKLLTALNECTEWG---QIFILDCLSNYNPKDDREAQSICERV 244
Query: 248 XSLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLL---------LSQSDNNVKLI 298
L+ ++AV+ L+ + ++ Y+ LL L + V+ +
Sbjct: 245 TPRLSHANSAVVLSAVKVLMKFLEL---LPKDSDYYNMLLKKLAPPLVTLLSGEPEVQYV 301
Query: 299 VLDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXX 358
L +N + +I+ I N P + ++ + LDI++ L + NI
Sbjct: 302 ALRNINLIVQKRPEILKQEIKVFFVKYNDP-IYVKLEKLDIMIRLASQANI-------AQ 353
Query: 359 XXXXTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAI-DVII 417
+ E + ++ + ++AI CAIK + A V L+D + + V + + I+
Sbjct: 354 VLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLI-QTKVNYVVQEAIV 412
Query: 418 FVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVE 468
+R+I P SII L +N + +WI+GEY + + +
Sbjct: 413 VIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNAD 463
>UNIPROTKB|E2RIV1 [details] [associations]
symbol:AP2B1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR002553 InterPro:IPR008152
InterPro:IPR009028 InterPro:IPR013037 InterPro:IPR015151
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 Pfam:PF02883 Pfam:PF09066 PIRSF:PIRSF002291
SMART:SM00809 SMART:SM01020 InterPro:IPR013041 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 CTD:163 KO:K11825 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 GeneTree:ENSGT00530000063138
OMA:DCHLNAD EMBL:AAEX03006623 RefSeq:XP_853723.1
ProteinModelPortal:E2RIV1 Ensembl:ENSCAFT00000028998 GeneID:480605
KEGG:cfa:480605 Uniprot:E2RIV1
Length = 951
Score = 223 (83.6 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 100/471 (21%), Positives = 198/471 (42%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
E+K L + +A+KK I + G+ + LF +V + +++ ++KL+ LYL
Sbjct: 17 ELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVN-CMQTDNLELKKLVYLYL-- 73
Query: 81 IDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
AK + P+M ++ N + + PN IR + +R + + +I E L + +
Sbjct: 74 --MNYAKSQ--PDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKC 129
Query: 140 LQHRHPYIRRNAILAVMAIYKL------PQG-----EQLLVDA-PEMIEKVLSTEQDPSA 187
L+ PY+R+ A + V ++ + QG L+ D+ P ++ ++ + S
Sbjct: 130 LKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALSEISE 189
Query: 188 KRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXXXX 247
+L Q+ IN LLT ++ +EWG Q+ +L+ + +
Sbjct: 190 SHPNSNLLDLNPQN--INKLLTALNECTEWG---QIFILDCLSNYNPKDDREAQSICERV 244
Query: 248 XSLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLL---------LSQSDNNVKLI 298
L+ ++AV+ L+ + ++ Y+ LL L + V+ +
Sbjct: 245 TPRLSHANSAVVLSAVKVLMKFLEL---LPKDSDYYNMLLKKLAPPLVTLLSGEPEVQYV 301
Query: 299 VLDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXX 358
L +N + +I+ I N P + ++ + LDI++ L + NI
Sbjct: 302 ALRNINLIVQKRPEILKQEIKVFFVKYNDP-IYVKLEKLDIMIRLASQANI-------AQ 353
Query: 359 XXXXTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAI-DVII 417
+ E + ++ + ++AI CAIK + A V L+D + + V + + I+
Sbjct: 354 VLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLI-QTKVNYVVQEAIV 412
Query: 418 FVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVE 468
+R+I P SII L +N + +WI+GEY + + +
Sbjct: 413 VIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNAD 463
>UNIPROTKB|E1BY12 [details] [associations]
symbol:AP2B1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 GeneTree:ENSGT00530000063138
OMA:DCHLNAD EMBL:AADN02025947 EMBL:AADN02025948 EMBL:AADN02025949
IPI:IPI00591263 Ensembl:ENSGALT00000003347 ArrayExpress:E1BY12
Uniprot:E1BY12
Length = 952
Score = 223 (83.6 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 100/471 (21%), Positives = 198/471 (42%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
E+K L + +A+KK I + G+ + LF +V + +++ ++KL+ LYL
Sbjct: 17 ELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVN-CMQTDNLELKKLVYLYL-- 73
Query: 81 IDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
AK + P+M ++ N + + PN IR + +R + + +I E L + +
Sbjct: 74 --MNYAKSQ--PDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKC 129
Query: 140 LQHRHPYIRRNAILAVMAIYKL------PQG-----EQLLVDA-PEMIEKVLSTEQDPSA 187
L+ PY+R+ A + V ++ + QG L+ D+ P ++ ++ + S
Sbjct: 130 LKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALSEISE 189
Query: 188 KRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXXXX 247
+L Q+ IN LLT ++ +EWG Q+ +L+ + +
Sbjct: 190 SHPNSNLLDLNPQN--INKLLTALNECTEWG---QIFILDCLSNYNPKDDREAQSICERV 244
Query: 248 XSLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLL---------LSQSDNNVKLI 298
L+ ++AV+ L+ + ++ Y+ LL L + V+ +
Sbjct: 245 TPRLSHANSAVVLSAVKVLMKFLEL---LPKDSDYYNMLLKKLAPPLVTLLSGEPEVQYV 301
Query: 299 VLDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXX 358
L +N + +I+ I N P + ++ + LDI++ L + NI
Sbjct: 302 ALRNINLIVQKRPEILKQEIKVFFVKYNDP-IYVKLEKLDIMIRLASQANI-------AQ 353
Query: 359 XXXXTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAI-DVII 417
+ E + ++ + ++AI CAIK + A V L+D + + V + + I+
Sbjct: 354 VLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLI-QTKVNYVVQEAIV 412
Query: 418 FVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVE 468
+R+I P SII L +N + +WI+GEY + + +
Sbjct: 413 VIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNAD 463
>ZFIN|ZDB-GENE-030131-6564 [details] [associations]
symbol:ap2b1 "adaptor-related protein complex 2,
beta 1 subunit" species:7955 "Danio rerio" [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
ZFIN:ZDB-GENE-030131-6564 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565
HOVERGEN:HBG050515 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 EMBL:BC049138 IPI:IPI00511115
UniGene:Dr.150746 ProteinModelPortal:Q7ZUF4 SMR:Q7ZUF4
ArrayExpress:Q7ZUF4 Uniprot:Q7ZUF4
Length = 951
Score = 222 (83.2 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 100/468 (21%), Positives = 195/468 (41%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
E+K L + +A+KK I + G+ + LF +V + +++ ++KL+ LYL
Sbjct: 17 ELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVN-CMQTDNLELKKLVYLYL-- 73
Query: 81 IDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
AK + P+M ++ N + + PN IR + +R + + +I E L + +
Sbjct: 74 --MNYAKSQ--PDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKC 129
Query: 140 LQHRHPYIRRNAILAVMAIYKL------PQG-----EQLLVDA-PEMIEKVLSTEQDPSA 187
L+ PY+R+ A + V ++ + QG L+ D+ P ++ ++ + S
Sbjct: 130 LKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALSEISE 189
Query: 188 KRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXXXX 247
+L Q+ IN LLT ++ +EWG Q+ +L+ + +
Sbjct: 190 SHPNSNLLDLNPQN--INKLLTALNECTEWG---QIFILDCLSNYNPKDEREAQSICERV 244
Query: 248 XSLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLL------LSQSDNNVKLIVLD 301
L+ ++AV+ L+ NT + L L + V+ + L
Sbjct: 245 TPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNTLLKKLSPPLVTLLSGEPEVQYVALR 304
Query: 302 RLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXX 361
+N + +I+ I N P + ++ + LDI++ L + NI
Sbjct: 305 NINLIVQKRPEILKQEIKVFFVKYNDP-IYVKLEKLDIMIRLASHANI-------AQVLA 356
Query: 362 XTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAI-DVIIFVR 420
+ E + ++ + ++AI CAIK + A V L+D + + V + + I+ +R
Sbjct: 357 ELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLI-QTKVNYVVQEAIVVIR 415
Query: 421 EIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVE 468
+I P SII L +N + +WI+GEY + + +
Sbjct: 416 DIFRKYPNKYESIIATLCENLDSLDEPDARGAMIWIVGEYAERIDNAD 463
>UNIPROTKB|E2RRJ6 [details] [associations]
symbol:AP1B1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR002553 InterPro:IPR008152
InterPro:IPR009028 InterPro:IPR013037 InterPro:IPR015151
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 Pfam:PF02883 Pfam:PF09066 PIRSF:PIRSF002291
SMART:SM00809 SMART:SM01020 InterPro:IPR013041 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 GO:GO:0030131 Gene3D:2.60.40.1150 Gene3D:3.30.310.10
InterPro:IPR012295 PANTHER:PTHR11134 SUPFAM:SSF55711
SUPFAM:SSF49348 OMA:PGNPSCT GeneTree:ENSGT00530000063138
EMBL:AAEX03014791 EMBL:AAEX03014790 ProteinModelPortal:E2RRJ6
Ensembl:ENSCAFT00000019193 NextBio:20860135 Uniprot:E2RRJ6
Length = 939
Score = 226 (84.6 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 99/470 (21%), Positives = 200/470 (42%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
E+K L + K +A+KK I + G+ + LF +V + +++ ++KL+ LYL
Sbjct: 17 ELKAELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVN-CMQTDNLELKKLVYLYL-- 73
Query: 81 IDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
AK + P+M ++ N + + PN IR + +R + + +I E L + +
Sbjct: 74 --MNYAKSQ--PDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKC 129
Query: 140 LQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIE-KVLSTEQDPSAKRNAFLMLFTC 198
L+ PY+R+ A + V ++ + QL+ D + K L ++ +P NA L
Sbjct: 130 LKDEDPYVRKTAAVCVAKLHDI--NAQLVEDQGFLDTLKDLISDSNPMVVANAVAALSEI 187
Query: 199 DQD-----------RAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXXXX 247
+ ++IN LLT ++ +EWG Q+ +L+ + +
Sbjct: 188 AESHPSSNLLDLNPQSINKLLTALNECTEWG---QIFILDCLANYTPKDDREAQSICERV 244
Query: 248 XSLLNAPSTAVIYECAGTLVS--------LSSAPTAIRAAANTYSQLLLSQSDNNVKLIV 299
L+ ++AV+ L+ L T ++ A LL ++ + ++ +
Sbjct: 245 TPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYGTLLKKLAPPLVTLLSAEPE--LQYVA 302
Query: 300 LDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXX 359
L +N + +I+ + N P + ++ + LDI++ L + NI
Sbjct: 303 LRNINLIVQKRPEILKHEMKVFFVKYNDP-IYVKLEKLDIMIRLASQANI-------AQV 354
Query: 360 XXXTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAI-DVIIF 418
+ E + ++ + ++AI CAIK + A V L+D + + V + + I+
Sbjct: 355 LAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLI-QTKVNYVVQEAIVV 413
Query: 419 VREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVE 468
+++I P S+I L +N + +WI+GEY + + +
Sbjct: 414 IKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDNAD 463
Score = 38 (18.4 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 21/84 (25%), Positives = 38/84 (45%)
Query: 755 LQNLCLELATMGDLKLVERPQNYTLAPESSKQIKANIKVSST-ETGV---IFGNIV-YET 809
L N L++ T D + ++ LAP + Q+ A + + T E + G+++ E
Sbjct: 744 LTNKALQVMT--DFAIQFNRNSFGLAPAAPLQVHAPLSPNQTVEISLPLNTVGSVMKMEP 801
Query: 810 SNVLERTVVVLNDIHIDIMDYISP 833
N L+ V V N+I + + P
Sbjct: 802 LNNLQ--VAVKNNIDVFYFSTLYP 823
>UNIPROTKB|F1RFI2 [details] [associations]
symbol:AP1B1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 GeneTree:ENSGT00530000063138
EMBL:CU640468 Ensembl:ENSSSCT00000010934 Uniprot:F1RFI2
Length = 947
Score = 226 (84.6 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 99/470 (21%), Positives = 200/470 (42%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
E+K L + K +A+KK I + G+ + LF +V + +++ ++KL+ LYL
Sbjct: 17 ELKAELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVN-CMQTDNLELKKLVYLYL-- 73
Query: 81 IDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
AK + P+M ++ N + + PN IR + +R + + +I E L + +
Sbjct: 74 --MNYAKSQ--PDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKC 129
Query: 140 LQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIE-KVLSTEQDPSAKRNAFLMLFTC 198
L+ PY+R+ A + V ++ + QL+ D + K L ++ +P NA L
Sbjct: 130 LKDEDPYVRKTAAVCVAKLHDI--NAQLVEDQGFLDTLKDLISDSNPMVVANAVAALSEI 187
Query: 199 DQD-----------RAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXXXX 247
+ ++IN LLT ++ +EWG Q+ +L+ + +
Sbjct: 188 AESHPSSNLLDLNPQSINKLLTALNECTEWG---QIFILDCLANYTPKDDREAQSICERV 244
Query: 248 XSLLNAPSTAVIYECAGTLVS--------LSSAPTAIRAAANTYSQLLLSQSDNNVKLIV 299
L+ ++AV+ L+ L T ++ A LL ++ + ++ +
Sbjct: 245 TPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYGTLLKKLAPPLVTLLSAEPE--LQYVA 302
Query: 300 LDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXX 359
L +N + +I+ + N P + ++ + LDI++ L + NI
Sbjct: 303 LRNINLIVQKRPEILKHEMKVFFVKYNDP-IYVKLEKLDIMIRLASQANI-------AQV 354
Query: 360 XXXTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAI-DVIIF 418
+ E + ++ + ++AI CAIK + A V L+D + + V + + I+
Sbjct: 355 LAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLI-QTKVNYVVQEAIVV 413
Query: 419 VREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVE 468
+++I P S+I L +N + +WI+GEY + + +
Sbjct: 414 IKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDNAD 463
Score = 38 (18.4 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 21/84 (25%), Positives = 38/84 (45%)
Query: 755 LQNLCLELATMGDLKLVERPQNYTLAPESSKQIKANIKVSST-ETGV---IFGNIV-YET 809
L N L++ T D + ++ LAP + Q+ A + + T E + G+++ E
Sbjct: 752 LTNKALQVMT--DFAIQFNRNSFGLAPAAPLQVHAPLSPNQTVEISLPLNTVGSVMKMEP 809
Query: 810 SNVLERTVVVLNDIHIDIMDYISP 833
N L+ V V N+I + + P
Sbjct: 810 LNNLQ--VAVKNNIDVFYFSTLYP 831
>UNIPROTKB|Q10567 [details] [associations]
symbol:AP1B1 "AP-1 complex subunit beta-1" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0030665
"clathrin-coated vesicle membrane" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005215 "transporter activity"
evidence=TAS] [GO:0000139 "Golgi membrane" evidence=TAS]
[GO:0005765 "lysosomal membrane" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0006892 "post-Golgi vesicle-mediated
transport" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016044 "cellular membrane organization"
evidence=TAS] [GO:0019886 "antigen processing and presentation of
exogenous peptide antigen via MHC class II" evidence=TAS]
[GO:0030659 "cytoplasmic vesicle membrane" evidence=TAS]
[GO:0032588 "trans-Golgi network membrane" evidence=TAS]
[GO:0050690 "regulation of defense response to virus by virus"
evidence=TAS] Reactome:REACT_11123 InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
GO:GO:0005829 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0006886 GO:GO:0000139 GO:GO:0050690 GO:GO:0016032
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0005765 GO:GO:0032588 GO:GO:0019886 GO:GO:0008565
Pathway_Interaction_DB:hnf3apathway GO:GO:0006897 GO:GO:0005215
GO:GO:0030659 eggNOG:COG5096 HOGENOM:HOG000163270
HOVERGEN:HBG050515 OrthoDB:EOG4PG607 GO:GO:0030131 GO:GO:0030665
Gene3D:2.60.40.1150 Gene3D:3.30.310.10 InterPro:IPR012295
PANTHER:PTHR11134 SUPFAM:SSF55711 SUPFAM:SSF49348 EMBL:L13939
EMBL:CT841508 EMBL:AC000041 EMBL:AC002059 EMBL:BC046242 EMBL:U36268
EMBL:U36250 EMBL:U36251 EMBL:U36252 EMBL:U36253 EMBL:U36254
EMBL:U36255 EMBL:U36256 EMBL:U36257 EMBL:U36258 EMBL:U36259
EMBL:U36260 EMBL:U36261 EMBL:U36262 EMBL:U36263 EMBL:U36264
EMBL:U36265 EMBL:U36266 EMBL:U36267 EMBL:AF379038 EMBL:AF379039
EMBL:L48038 IPI:IPI00328257 IPI:IPI00384489 IPI:IPI00413947
IPI:IPI00940292 PIR:I54360 RefSeq:NP_001118.3 RefSeq:NP_001159491.1
RefSeq:NP_663782.2 UniGene:Hs.368794 ProteinModelPortal:Q10567
SMR:Q10567 DIP:DIP-24207N IntAct:Q10567 STRING:Q10567
PhosphoSite:Q10567 DMDM:290457628 PaxDb:Q10567 PRIDE:Q10567
DNASU:162 Ensembl:ENST00000317368 Ensembl:ENST00000356015
Ensembl:ENST00000357586 Ensembl:ENST00000402502
Ensembl:ENST00000405198 Ensembl:ENST00000415447
Ensembl:ENST00000432560 GeneID:162 KEGG:hsa:162 UCSC:uc003afi.3
UCSC:uc003afj.3 CTD:162 GeneCards:GC22M029723 HGNC:HGNC:554
MIM:600157 neXtProt:NX_Q10567 PharmGKB:PA24844 InParanoid:Q10567
KO:K12392 OMA:PGNPSCT PhylomeDB:Q10567 ChiTaRS:AP1B1 GenomeRNAi:162
NextBio:647 ArrayExpress:Q10567 Bgee:Q10567 CleanEx:HS_AP1B1
Genevestigator:Q10567 GermOnline:ENSG00000100280 GO:GO:0016044
GO:GO:0006892 Uniprot:Q10567
Length = 949
Score = 226 (84.6 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 99/470 (21%), Positives = 200/470 (42%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
E+K L + K +A+KK I + G+ + LF +V + +++ ++KL+ LYL
Sbjct: 17 ELKAELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVN-CMQTDNLELKKLVYLYL-- 73
Query: 81 IDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
AK + P+M ++ N + + PN IR + +R + + +I E L + +
Sbjct: 74 --MNYAKSQ--PDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKC 129
Query: 140 LQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIE-KVLSTEQDPSAKRNAFLMLFTC 198
L+ PY+R+ A + V ++ + QL+ D + K L ++ +P NA L
Sbjct: 130 LKDEDPYVRKTAAVCVAKLHDI--NAQLVEDQGFLDTLKDLISDSNPMVVANAVAALSEI 187
Query: 199 DQD-----------RAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXXXX 247
+ ++IN LLT ++ +EWG Q+ +L+ + +
Sbjct: 188 AESHPSSNLLDLNPQSINKLLTALNECTEWG---QIFILDCLANYMPKDDREAQSICERV 244
Query: 248 XSLLNAPSTAVIYECAGTLVS--------LSSAPTAIRAAANTYSQLLLSQSDNNVKLIV 299
L+ ++AV+ L+ L T ++ A LL ++ + ++ +
Sbjct: 245 TPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYGTLLKKLAPPLVTLLSAEPE--LQYVA 302
Query: 300 LDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXX 359
L +N + +I+ + N P + ++ + LDI++ L + NI
Sbjct: 303 LRNINLIVQKRPEILKHEMKVFFVKYNDP-IYVKLEKLDIMIRLASQANI-------AQV 354
Query: 360 XXXTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAI-DVIIF 418
+ E + ++ + ++AI CAIK + A V L+D + + V + + I+
Sbjct: 355 LAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLI-QTKVNYVVQEAIVV 413
Query: 419 VREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVE 468
+++I P S+I L +N + +WI+GEY + + +
Sbjct: 414 IKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDNAD 463
Score = 38 (18.4 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 21/84 (25%), Positives = 38/84 (45%)
Query: 755 LQNLCLELATMGDLKLVERPQNYTLAPESSKQIKANIKVSST-ETGV---IFGNIV-YET 809
L N L++ T D + ++ LAP + Q+ A + + T E + G+++ E
Sbjct: 751 LTNKALQVMT--DFAIQFNRNSFGLAPATPLQVHAPLSPNQTVEISLPLSTVGSVMKMEP 808
Query: 810 SNVLERTVVVLNDIHIDIMDYISP 833
N L+ V V N+I + + P
Sbjct: 809 LNNLQ--VAVKNNIDVFYFSTLYP 830
>UNIPROTKB|I3LV02 [details] [associations]
symbol:AP1B1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 GeneTree:ENSGT00530000063138
OMA:KECENAD EMBL:CU640468 Ensembl:ENSSSCT00000028355 Uniprot:I3LV02
Length = 949
Score = 226 (84.6 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 99/470 (21%), Positives = 200/470 (42%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
E+K L + K +A+KK I + G+ + LF +V + +++ ++KL+ LYL
Sbjct: 17 ELKAELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVN-CMQTDNLELKKLVYLYL-- 73
Query: 81 IDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
AK + P+M ++ N + + PN IR + +R + + +I E L + +
Sbjct: 74 --MNYAKSQ--PDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKC 129
Query: 140 LQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIE-KVLSTEQDPSAKRNAFLMLFTC 198
L+ PY+R+ A + V ++ + QL+ D + K L ++ +P NA L
Sbjct: 130 LKDEDPYVRKTAAVCVAKLHDI--NAQLVEDQGFLDTLKDLISDSNPMVVANAVAALSEI 187
Query: 199 DQD-----------RAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXXXX 247
+ ++IN LLT ++ +EWG Q+ +L+ + +
Sbjct: 188 AESHPSSNLLDLNPQSINKLLTALNECTEWG---QIFILDCLANYTPKDDREAQSICERV 244
Query: 248 XSLLNAPSTAVIYECAGTLVS--------LSSAPTAIRAAANTYSQLLLSQSDNNVKLIV 299
L+ ++AV+ L+ L T ++ A LL ++ + ++ +
Sbjct: 245 TPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYGTLLKKLAPPLVTLLSAEPE--LQYVA 302
Query: 300 LDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXX 359
L +N + +I+ + N P + ++ + LDI++ L + NI
Sbjct: 303 LRNINLIVQKRPEILKHEMKVFFVKYNDP-IYVKLEKLDIMIRLASQANI-------AQV 354
Query: 360 XXXTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAI-DVIIF 418
+ E + ++ + ++AI CAIK + A V L+D + + V + + I+
Sbjct: 355 LAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLI-QTKVNYVVQEAIVV 413
Query: 419 VREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVE 468
+++I P S+I L +N + +WI+GEY + + +
Sbjct: 414 IKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDNAD 463
Score = 38 (18.4 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 21/84 (25%), Positives = 38/84 (45%)
Query: 755 LQNLCLELATMGDLKLVERPQNYTLAPESSKQIKANIKVSST-ETGV---IFGNIV-YET 809
L N L++ T D + ++ LAP + Q+ A + + T E + G+++ E
Sbjct: 751 LTNKALQVMT--DFAIQFNRNSFGLAPAAPLQVHAPLSPNQTVEISLPLNTVGSVMKMEP 808
Query: 810 SNVLERTVVVLNDIHIDIMDYISP 833
N L+ V V N+I + + P
Sbjct: 809 LNNLQ--VAVKNNIDVFYFSTLYP 830
>FB|FBgn0010380 [details] [associations]
symbol:AP-1-2beta "Adaptor Protein complex 1/2, beta subunit"
species:7227 "Drosophila melanogaster" [GO:0005905 "coated pit"
evidence=IDA] [GO:0030119 "AP-type membrane coat adaptor complex"
evidence=IDA] [GO:0030121 "AP-1 adaptor complex" evidence=ISS;NAS]
[GO:0007269 "neurotransmitter secretion" evidence=NAS] [GO:0008021
"synaptic vesicle" evidence=TAS] [GO:0016183 "synaptic vesicle
coating" evidence=TAS] [GO:0006901 "vesicle coating" evidence=TAS]
[GO:0030135 "coated vesicle" evidence=TAS] [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0030136 "clathrin-coated vesicle"
evidence=IDA] [GO:0048749 "compound eye development" evidence=IMP]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013037 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883
Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020
InterPro:IPR013041 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008565 GO:GO:0008021 EMBL:AE014298
GO:GO:0005905 GO:GO:0007269 eggNOG:COG5096 GO:GO:0030131
Gene3D:2.60.40.1150 Gene3D:3.30.310.10 InterPro:IPR012295
PANTHER:PTHR11134 SUPFAM:SSF55711 SUPFAM:SSF49348 KO:K12392
GeneTree:ENSGT00530000063138 OMA:YDISATM GO:GO:0030119
GO:GO:0016183 GO:GO:0048749 EMBL:BT016054 EMBL:X75910 PIR:S39295
RefSeq:NP_523415.1 UniGene:Dm.2885 SMR:Q24253 DIP:DIP-20749N
IntAct:Q24253 MINT:MINT-316769 STRING:Q24253
EnsemblMetazoa:FBtr0074789 GeneID:32987 KEGG:dme:Dmel_CG12532
UCSC:CG12532-RA CTD:32987 FlyBase:FBgn0010380 InParanoid:Q24253
OrthoDB:EOG4GHX41 GenomeRNAi:32987 NextBio:781377 Uniprot:Q24253
Length = 921
Score = 222 (83.2 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 100/470 (21%), Positives = 196/470 (41%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
E+K L + K +A+KK I + G+ + LF +V + +++ ++KL+ LYL
Sbjct: 17 ELKSELNNDKKEKKKEAVKKVIASMTVGKDVSALFPDVVN-CMQTDNLELKKLVYLYL-- 73
Query: 81 IDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
AK + P+M ++ N + + N IR + +R + + +I E L + +
Sbjct: 74 --MNYAKSQ--PDMAIMAVNTFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKC 129
Query: 140 LQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKV--LSTEQDPSAKRNAFLMLFT 197
L+ PY+R+ A + V +Y + +V+ ++++ L ++ +P NA L
Sbjct: 130 LKDEDPYVRKTAAVCVAKLYDI---SATMVEDQGFLDQLKDLLSDSNPMVVANAVAALSE 186
Query: 198 CDQDR------------AINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXX 245
++ IN LLT ++ +EWG Q+ +L+ + +
Sbjct: 187 INEASQSGQPLVEMNSVTINKLLTALNECTEWG---QVFILDSLANYSPKDEREAQSICE 243
Query: 246 XXXSLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLL------LSQSDNNVKLIV 299
L + AV+ L+ L ++ T ++ L L S+ V+ +
Sbjct: 244 RITPRLAHANAAVVLSAVKVLMKLLEMLSSDSDFCATLTKKLAPPLVTLLSSEPEVQYVA 303
Query: 300 LDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXX 359
L +N + DI+ + N P + ++ + LDI++ L NI
Sbjct: 304 LRNINLIVQKRPDILKHEMKVFFVKYNDP-IYVKLEKLDIMIRLANQSNI-------AQV 355
Query: 360 XXXTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAI-DVIIF 418
+ E + ++ + ++AI CAIK A V L+D + + V + + I+
Sbjct: 356 LSELKEYATEVDVDFVRKAVRAIGRCAIKVEPSAERCVSTLLDLI-QTKVNYVVQEAIVV 414
Query: 419 VREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVE 468
+++I P SII+ L +N + +WIIGEY + + +
Sbjct: 415 IKDIFRKYPNKYESIISTLCENLDTLDEPEARASMVWIIGEYAERIDNAD 464
Score = 41 (19.5 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 5/23 (21%), Positives = 15/23 (65%)
Query: 740 DIVLDVTVINRTKETLQNLCLEL 762
++ +D+T+ N+ + + N ++L
Sbjct: 719 EVFMDMTLTNKAMQPMTNFAIQL 741
>DICTYBASE|DDB_G0279141 [details] [associations]
symbol:ap1b1 "beta adaptin" species:44689
"Dictyostelium discoideum" [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006897 "endocytosis"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0030665 "clathrin-coated
vesicle membrane" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013037 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883
Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020
InterPro:IPR013041 dictyBase:DDB_G0279141 GO:GO:0005794
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GenomeReviews:CM000152_GR GO:GO:0008565
GO:GO:0006897 EMBL:AAFI02000027 eggNOG:COG5096 GO:GO:0030131
GO:GO:0030665 Gene3D:2.60.40.1150 Gene3D:3.30.310.10
InterPro:IPR012295 PANTHER:PTHR11134 SUPFAM:SSF55711
SUPFAM:SSF49348 KO:K12392 RefSeq:XP_641846.1 HSSP:P63010
ProteinModelPortal:Q54X82 SMR:Q54X82 STRING:Q54X82 PRIDE:Q54X82
EnsemblProtists:DDB0234067 GeneID:8621892 KEGG:ddi:DDB_G0279141
OMA:SDPNPLI ProtClustDB:CLSZ2735785 Uniprot:Q54X82
Length = 942
Score = 217 (81.4 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 100/466 (21%), Positives = 193/466 (41%)
Query: 20 NEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLE 79
+E+KE L K +A+KK I + G+ + LF ++ + + H ++ L+YL
Sbjct: 16 HELKEELLSQREDKKKEAVKKVIAAMTVGKDVSMLFTHVLNCM---QTHNLELKKLVYLY 72
Query: 80 IIDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQ 138
+++ AK P+ ++ N + + PN IR + +R + + I E L +
Sbjct: 73 VMNY--AKNH--PDRAILAVNTFQKDASDPNPLIRALAVRTMGCIRVDNITEHLCEPLRH 128
Query: 139 NLQHRHPYIRRNAILAVMAIYKL-P-----QG-----EQLLVDAPEMI--EKVLS-TEQD 184
L+ + PY+R+ A + V +Y + P QG LL D+ M+ V S TE D
Sbjct: 129 ALKDQDPYVRKTAAVCVAKLYDVNPELVENQGFLNILNDLLGDSNPMVVANAVASLTEID 188
Query: 185 PSAKRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXX 244
+K+ F + +N LL ++ +EWG Q+ +L + K +
Sbjct: 189 EVSKKEVFRI-----HSGNLNKLLAALNECTEWG---QVFILNSLCKYTPRDSQEAENVC 240
Query: 245 XXXXSLLNAPSTAVIYECAGTLVSLSSA---PTAIRAAANTYSQLLLS--QSDNNVKLIV 299
L ++AV+ L+ ++ IR + L++ + ++ +
Sbjct: 241 ERVAPRLQHANSAVVLSAVKVLMKYMNSIGNNDVIRLFCKKMAPPLVTLLSKEPEIQFLG 300
Query: 300 LDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXX 359
L +N + +I+ + N P + ++ + L+I++ L +NI
Sbjct: 301 LRNINLIVQKRPEILQYEMKVFFCKYNDP-IYVKMEKLEIMIMLANEKNIEEVLLEFKEY 359
Query: 360 XXXTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAI-DVIIF 418
E + E+ + ++AI CAIK + + +L+D + + V + + II
Sbjct: 360 AT-------EIDVEFVRKAVRAIGRCAIKIDRASERCIQVLLDLI-QTKVNYVVQEAIIV 411
Query: 419 VREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSL 464
+++I P II L N + +WIIGEY + +
Sbjct: 412 IKDIFRKYPNKYEGIIATLCANLESLDEPEAKASMIWIIGEYAERI 457
Score = 46 (21.3 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 23/91 (25%), Positives = 35/91 (38%)
Query: 611 DN-DSFDRIVVCIRLLCNTGDNIRKIWLQS--CRQSFVKMLSEKQLRESE-ELKAKAQIS 666
DN D DR V RLL + + + L L E L E + A +
Sbjct: 513 DNPDLRDRGFVYWRLLSTDFEAAKAVVLSEKPLITDTTSHLDESLLNELILNISTLASVY 572
Query: 667 HAQPDDLIDFYHLKSRKGMSQLELEDEVQDD 697
H P+ + +++G+ E EDE + D
Sbjct: 573 HKPPETFVTKLKGLNKRGLRNKEEEDEEEPD 603
>DICTYBASE|DDB_G0274003 [details] [associations]
symbol:ap3b-2 "beta adaptin" species:44689
"Dictyostelium discoideum" [GO:0030123 "AP-3 adaptor complex"
evidence=IEA;IDA] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
[GO:0010008 "endosome membrane" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR026739 InterPro:IPR026740
Pfam:PF01602 PIRSF:PIRSF037096 dictyBase:DDB_G0274003
dictyBase:DDB_G0272578 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0006897
GenomeReviews:CM000151_GR GO:GO:0010008 EMBL:AAFI02000011
EMBL:AAFI02000009 eggNOG:COG5096 PANTHER:PTHR11134 KO:K12397
GO:GO:0030123 PANTHER:PTHR11134:SF1 RefSeq:XP_644360.1
RefSeq:XP_645054.1 ProteinModelPortal:Q556J8 STRING:Q556J8
PRIDE:Q556J8 EnsemblProtists:DDB0237724 EnsemblProtists:DDB0238781
GeneID:8618729 GeneID:8619247 KEGG:ddi:DDB_G0272578
KEGG:ddi:DDB_G0274003 OMA:FSDEHES ProtClustDB:CLSZ2729218
Uniprot:Q556J8
Length = 1108
Score = 157 (60.3 bits), Expect = 6.2e-13, Sum P(3) = 6.2e-13
Identities = 55/220 (25%), Positives = 113/220 (51%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
EIK+ L+ K+++MKK I +L G + + F +V+ V+ ++ I+KL+ +YL
Sbjct: 25 EIKKHLDSPSDADKLESMKKLIAMLSKGRDVSEAFPQVVKNVIV-KNLEIKKLVYMYL-- 81
Query: 81 IDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNL 140
+ +++ +L ++ +L ++ IR LR + + +IIE +I ++ +++
Sbjct: 82 VHYAESQN---DSALLSINTIQKSLNDQSQVIRASALRVMSSIRVIDIIEVIILAIEKSV 138
Query: 141 QHRHPYIRRNAILAVMAIYKLPQGEQL-LVDAPEMIEKVLSTEQDPSAKRNAFLMLFTCD 199
+ P++R+ A A+ ++KL +Q L+D E++ ST A AF L C
Sbjct: 139 KDTSPFVRKAAAFAIAKVHKLDCDKQEPLIDLLEILLNDTST-MVLGAAIVAFNEL--CP 195
Query: 200 QDRAINYLLTHVDRV----SEWGELLQMVVLELIRKVCRT 235
Q + L H ++ +++ E Q++VL+++ K R+
Sbjct: 196 Q--RFDLLHQHYRKICQLLADFDEWSQVIVLDILTKYARS 233
Score = 94 (38.1 bits), Expect = 6.2e-13, Sum P(3) = 6.2e-13
Identities = 41/179 (22%), Positives = 80/179 (44%)
Query: 250 LLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLDRLNELRSS 309
LL + + AV+ A + + AP+ I A S + + +S V+ I L ++ + +
Sbjct: 304 LLQSRNNAVVM--AVSSLYFYCAPS-IEAQKVGKSLVRILRSGPEVQYITLTNISTMVTL 360
Query: 310 HRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQSGELE 369
+ + + + P I+ K L+I+ L TP NI + E
Sbjct: 361 RPSMFEPHLSEFFIHSSDPEYSIKLK-LEILTRLATPENIGKILK---------EFKEYV 410
Query: 370 KNGEYRQML--IQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVREIIEMN 426
KN + + + IQAI SCA P+V + ++ LM L + + + +I ++ ++++N
Sbjct: 411 KNEDKKFVAATIQAIGSCASTVPDVTESCIYGLMSLLSNQSTVVVAESVIVLKRLLQLN 469
Score = 59 (25.8 bits), Expect = 6.2e-13, Sum P(3) = 6.2e-13
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 434 ITRLLDNFYQIRAARVCTCALWIIGEYC 461
+++LLD Q+ +AR +W+IGEYC
Sbjct: 514 LSKLLDTL-QVPSARASI--VWVIGEYC 538
Score = 41 (19.5 bits), Expect = 4.1e-11, Sum P(3) = 4.1e-11
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 782 ESSKQIKAN----IKVSSTETGVIFGNIVYETSNVLE 814
E K +K N K SS+ + + NI+ S +L+
Sbjct: 483 EKEKDVKENQSTISKHSSSNNSIKYDNIILHLSKLLD 519
Score = 40 (19.1 bits), Expect = 5.2e-11, Sum P(3) = 5.2e-11
Identities = 13/45 (28%), Positives = 19/45 (42%)
Query: 685 MSQLELEDEVQDDLKRATGEFVKEGDDANKL---NRILQLTGFSD 726
+ +LE E E + D+K K N + N IL L+ D
Sbjct: 475 LEKLEKEKEKEKDVKENQSTISKHSSSNNSIKYDNIILHLSKLLD 519
>DICTYBASE|DDB_G0272578 [details] [associations]
symbol:ap3b-1 "beta adaptin" species:44689
"Dictyostelium discoideum" [GO:0030123 "AP-3 adaptor complex"
evidence=IEA;IDA] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
[GO:0010008 "endosome membrane" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR026739 InterPro:IPR026740
Pfam:PF01602 PIRSF:PIRSF037096 dictyBase:DDB_G0274003
dictyBase:DDB_G0272578 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0006897
GenomeReviews:CM000151_GR GO:GO:0010008 EMBL:AAFI02000011
EMBL:AAFI02000009 eggNOG:COG5096 PANTHER:PTHR11134 KO:K12397
GO:GO:0030123 PANTHER:PTHR11134:SF1 RefSeq:XP_644360.1
RefSeq:XP_645054.1 ProteinModelPortal:Q556J8 STRING:Q556J8
PRIDE:Q556J8 EnsemblProtists:DDB0237724 EnsemblProtists:DDB0238781
GeneID:8618729 GeneID:8619247 KEGG:ddi:DDB_G0272578
KEGG:ddi:DDB_G0274003 OMA:FSDEHES ProtClustDB:CLSZ2729218
Uniprot:Q556J8
Length = 1108
Score = 157 (60.3 bits), Expect = 6.2e-13, Sum P(3) = 6.2e-13
Identities = 55/220 (25%), Positives = 113/220 (51%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
EIK+ L+ K+++MKK I +L G + + F +V+ V+ ++ I+KL+ +YL
Sbjct: 25 EIKKHLDSPSDADKLESMKKLIAMLSKGRDVSEAFPQVVKNVIV-KNLEIKKLVYMYL-- 81
Query: 81 IDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNL 140
+ +++ +L ++ +L ++ IR LR + + +IIE +I ++ +++
Sbjct: 82 VHYAESQN---DSALLSINTIQKSLNDQSQVIRASALRVMSSIRVIDIIEVIILAIEKSV 138
Query: 141 QHRHPYIRRNAILAVMAIYKLPQGEQL-LVDAPEMIEKVLSTEQDPSAKRNAFLMLFTCD 199
+ P++R+ A A+ ++KL +Q L+D E++ ST A AF L C
Sbjct: 139 KDTSPFVRKAAAFAIAKVHKLDCDKQEPLIDLLEILLNDTST-MVLGAAIVAFNEL--CP 195
Query: 200 QDRAINYLLTHVDRV----SEWGELLQMVVLELIRKVCRT 235
Q + L H ++ +++ E Q++VL+++ K R+
Sbjct: 196 Q--RFDLLHQHYRKICQLLADFDEWSQVIVLDILTKYARS 233
Score = 94 (38.1 bits), Expect = 6.2e-13, Sum P(3) = 6.2e-13
Identities = 41/179 (22%), Positives = 80/179 (44%)
Query: 250 LLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLDRLNELRSS 309
LL + + AV+ A + + AP+ I A S + + +S V+ I L ++ + +
Sbjct: 304 LLQSRNNAVVM--AVSSLYFYCAPS-IEAQKVGKSLVRILRSGPEVQYITLTNISTMVTL 360
Query: 310 HRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQSGELE 369
+ + + + P I+ K L+I+ L TP NI + E
Sbjct: 361 RPSMFEPHLSEFFIHSSDPEYSIKLK-LEILTRLATPENIGKILK---------EFKEYV 410
Query: 370 KNGEYRQML--IQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVREIIEMN 426
KN + + + IQAI SCA P+V + ++ LM L + + + +I ++ ++++N
Sbjct: 411 KNEDKKFVAATIQAIGSCASTVPDVTESCIYGLMSLLSNQSTVVVAESVIVLKRLLQLN 469
Score = 59 (25.8 bits), Expect = 6.2e-13, Sum P(3) = 6.2e-13
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 434 ITRLLDNFYQIRAARVCTCALWIIGEYC 461
+++LLD Q+ +AR +W+IGEYC
Sbjct: 514 LSKLLDTL-QVPSARASI--VWVIGEYC 538
Score = 41 (19.5 bits), Expect = 4.1e-11, Sum P(3) = 4.1e-11
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 782 ESSKQIKAN----IKVSSTETGVIFGNIVYETSNVLE 814
E K +K N K SS+ + + NI+ S +L+
Sbjct: 483 EKEKDVKENQSTISKHSSSNNSIKYDNIILHLSKLLD 519
Score = 40 (19.1 bits), Expect = 5.2e-11, Sum P(3) = 5.2e-11
Identities = 13/45 (28%), Positives = 19/45 (42%)
Query: 685 MSQLELEDEVQDDLKRATGEFVKEGDDANKL---NRILQLTGFSD 726
+ +LE E E + D+K K N + N IL L+ D
Sbjct: 475 LEKLEKEKEKEKDVKENQSTISKHSSSNNSIKYDNIILHLSKLLD 519
>WB|WBGene00000160 [details] [associations]
symbol:apb-1 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030131 "clathrin adaptor
complex" evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013037 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883
Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020
InterPro:IPR013041 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0006915 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0002119 GO:GO:0008565 GO:GO:0000003
HOGENOM:HOG000163270 KO:K11825 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 OMA:PGNPSCT
GeneTree:ENSGT00530000063138 EMBL:FO081557 UniGene:Cel.22457
GeneID:175376 KEGG:cel:CELE_Y71H2B.10 UCSC:Y71H2B.10a CTD:175376
NextBio:887890 RefSeq:NP_001022937.1 ProteinModelPortal:Q9N4F3
SMR:Q9N4F3 DIP:DIP-27411N IntAct:Q9N4F3 MINT:MINT-116366
STRING:Q9N4F3 PRIDE:Q9N4F3 EnsemblMetazoa:Y71H2B.10a.1
EnsemblMetazoa:Y71H2B.10a.2 WormBase:Y71H2B.10a InParanoid:Q9N4F3
ArrayExpress:Q9N4F3 Uniprot:Q9N4F3
Length = 955
Score = 218 (81.8 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 96/467 (20%), Positives = 196/467 (41%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
E+K L + K +A+KK I + G+ + LF +V + +++ ++KL+ LYL
Sbjct: 17 ELKNELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVN-CMQTDNVELKKLVYLYL-- 73
Query: 81 IDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
AK + P++ ++ N + + PN IR + +R + + +I E L + +
Sbjct: 74 --MNYAKSQ--PDLAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVEKITEYLCDPLRRC 129
Query: 140 LQHRHPYIRRNAILAVMAIYKLPQG---EQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLF 196
++ PY+R+ A + V ++ + EQ V E++ +LS + +P NA L
Sbjct: 130 MKDEDPYVRKTAAVCVAKLHDMNPALVKEQGFV---ELLNDLLS-DANPMVVANAVAALT 185
Query: 197 TCDQDRAI--------NYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXXXXX 248
++ + + N LLT ++ +EWG Q+ +L+ + +
Sbjct: 186 EMNEQQTVIEVNSQMVNKLLTALNECTEWG---QVFILDALAGYTPRDERETQNICERIS 242
Query: 249 SLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLL------LSQSDNNVKLIVLDR 302
L + AV+ L+ L A ++ L L ++ ++ + L
Sbjct: 243 PRLAHANAAVVLSTVKVLMKLIDMMPADSDFITQLTKKLAPPMVTLLSAEPEIQYVALRN 302
Query: 303 LNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXXX 362
+N + DI+ + N P + ++ + LDI++ L NI
Sbjct: 303 INLIVQKRPDILKQEMKVFFVKYNDP-IYVKMEKLDIMIRLAQQNNI-------AQVLSE 354
Query: 363 TQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAI-DVIIFVRE 421
+ E + ++ + ++AI CAIK + V L++ + + V + + ++ +++
Sbjct: 355 LKEYATEVDVDFVRKSVRAIGRCAIKVEASSERCVQTLLELI-QTKVNYVVQEAVVVIKD 413
Query: 422 IIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVE 468
I P SII+ L +N + +WIIGEY + + +
Sbjct: 414 IFRKYPNRYESIISALCENLDTLDEPEARASMIWIIGEYAERIDNAD 460
Score = 39 (18.8 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 12/71 (16%), Positives = 33/71 (46%)
Query: 741 IVLDVTVINRTKETLQNLCLELA--TMGDLK---------LVERPQNYTLAPESSKQIKA 789
I +++T+ NR + + L+ + G + L + QNYT+A +++ ++
Sbjct: 755 IFMEMTITNRAMQAISGFALQFNKNSFGLIPVEQVNPAPILPNQSQNYTIACDTTGAVQV 814
Query: 790 NIKVSSTETGV 800
+++ + +
Sbjct: 815 TTPLTNLQVAI 825
>UNIPROTKB|B7ZKR7 [details] [associations]
symbol:AP3B2 "AP3B2 protein" species:9606 "Homo sapiens"
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030123
"AP-3 adaptor complex" evidence=IEA] [GO:0044431 "Golgi apparatus
part" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR026739 InterPro:IPR026740
Pfam:PF01602 PIRSF:PIRSF037096 InterPro:IPR013041
InterPro:IPR008153 GO:GO:0005634 GO:GO:0005794 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
PANTHER:PTHR11134 SUPFAM:SSF49348 Gene3D:2.60.40.1230 GO:GO:0044431
HOVERGEN:HBG050519 GO:GO:0030123 PANTHER:PTHR11134:SF1
IPI:IPI01011317 UniGene:Hs.199593 HGNC:HGNC:567 EMBL:AC105339
EMBL:FJ695193 EMBL:BC143342 SMR:B7ZKR7 STRING:B7ZKR7
Ensembl:ENST00000535348 UCSC:uc010uoj.2 Uniprot:B7ZKR7
Length = 1050
Score = 130 (50.8 bits), Expect = 1.2e-12, Sum P(4) = 1.2e-12
Identities = 54/222 (24%), Positives = 93/222 (41%)
Query: 250 LLNAPSTAVIYECAGTLVSLSSAPTA-IRAAANTYSQLLLSQSDNNVKLIVLDRLNELRS 308
LL + S AV+ A L AP A + A +LL S S+ V+ +VL + +
Sbjct: 280 LLQSRSAAVVMAVAQLYFHL--APKAEVGVIAKALVRLLRSHSE--VQYVVLQNVATMSI 335
Query: 309 SHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQSGEL 368
R + + P I+ L+++ L NI T +
Sbjct: 336 KRRGMFEPYLKSFYIRSTDPT-QIKILKLEVLTNLANETNIPTVLREFQ-----TYIRSM 389
Query: 369 EKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVREIIEMNPK 428
+K ++ IQAI CA V T ++ L+ L + + + ++ ++++++M P
Sbjct: 390 DK--DFVAATIQAIGRCATNIGRVRDTCLNGLVQLLSNRDELVVAESVVVIKKLLQMQPA 447
Query: 429 LRVSII---TRLLDNFYQIRAARVCTCALWIIGEYCQSLSEV 467
II +L DN Q+ AR LW+IGEYC+ + +
Sbjct: 448 QHGEIIKHLAKLTDNI-QVPMARASI--LWLIGEYCEHVPRI 486
Score = 114 (45.2 bits), Expect = 1.2e-12, Sum P(4) = 1.2e-12
Identities = 42/161 (26%), Positives = 80/161 (49%)
Query: 86 AKGRVLPEMI-LICQNLR-NNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNLQHR 143
A+G+ ++ + +N+ N++ PN+ IR LR L + I+ ++ ++ +
Sbjct: 66 ARGKNASDLFPAVVKNVACKNIEDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEAASDM 125
Query: 144 HPYIRRNAILAVMAIYKLP--QGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLF--TCD 199
PY+R+ A A+ +Y L Q +QL+ E+IEK+L+ + A + +M F C
Sbjct: 126 SPYVRKTAAHAIPKLYSLDSDQKDQLI----EVIEKLLADKTTLVA--GSVVMAFEEVCP 179
Query: 200 QDRAI---NY--LLTHVDRVSEWGELLQMVVLELIRKVCRT 235
+ + NY L + V EWG Q+V++ ++ + RT
Sbjct: 180 ERIDLIHKNYRKLCNLLIDVEEWG---QVVIISMLTRYART 217
Score = 69 (29.3 bits), Expect = 1.2e-12, Sum P(4) = 1.2e-12
Identities = 13/43 (30%), Positives = 26/43 (60%)
Query: 20 NEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYV 62
+++KE L+ N K++AMK+ + ++ G+ LF +V+ V
Sbjct: 40 DDLKEMLDTNKDSLKLEAMKRIVAMIARGKNASDLFPAVVKNV 82
Score = 38 (18.4 bits), Expect = 1.2e-12, Sum P(4) = 1.2e-12
Identities = 12/46 (26%), Positives = 17/46 (36%)
Query: 485 SVSEEGEDTDSSKKXXXXXXXXXXXXRRPAVLADGTYATQSAASET 530
S S+EG D+ SS PA + T + +A T
Sbjct: 726 SSSDEGSDSSSSSSESEMTSESEEEQLEPASWSRKTPPSSKSAPAT 771
>UNIPROTKB|F1MIF2 [details] [associations]
symbol:AP1B1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 GeneTree:ENSGT00530000063138
OMA:KECENAD EMBL:DAAA02045602 IPI:IPI00690120 UniGene:Bt.35586
Ensembl:ENSBTAT00000001576 Uniprot:F1MIF2
Length = 946
Score = 225 (84.3 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 98/470 (20%), Positives = 200/470 (42%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
E+K L + K +A+KK I + G+ + LF +V + +++ ++KL+ LYL
Sbjct: 17 ELKAELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVN-CMQTDNLELKKLVYLYL-- 73
Query: 81 IDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
AK + P+M ++ N + + PN IR + +R + + +I E L + +
Sbjct: 74 --MNYAKSQ--PDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKC 129
Query: 140 LQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIE-KVLSTEQDPSAKRNAFLMLFTC 198
L+ PY+R+ A + V ++ + QL+ D + K L ++ +P NA L
Sbjct: 130 LKDEDPYVRKTAAVCVAKLHDI--NAQLVEDQGFLDTLKDLISDSNPMVVANAVAALSEI 187
Query: 199 DQD-----------RAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXXXX 247
+ ++IN LLT ++ +EWG Q+ +L+ + +
Sbjct: 188 AESHPSSNLLDLNPQSINKLLTALNECTEWG---QIFILDCLANYTPKDDREAQSICERV 244
Query: 248 XSLLNAPSTAVIYECAGTLVS--------LSSAPTAIRAAANTYSQLLLSQSDNNVKLIV 299
L+ ++AV+ L+ L T ++ A LL ++ + ++ +
Sbjct: 245 TPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYGTLLKKLAPPLVTLLSAEPE--LQYVA 302
Query: 300 LDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXX 359
L +N + +++ + N P + ++ + LDI++ L + NI
Sbjct: 303 LRNINLIVQKRPEVLKHEMKVFFVKYNDP-IYVKLEKLDIMIRLASQANI-------AQV 354
Query: 360 XXXTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAI-DVIIF 418
+ E + ++ + ++AI CAIK + A V L+D + + V + + I+
Sbjct: 355 LAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLI-QTKVNYVVQEAIVV 413
Query: 419 VREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVE 468
+++I P S+I L +N + +WI+GEY + + +
Sbjct: 414 IKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDNAD 463
Score = 39 (18.8 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 19/77 (24%), Positives = 37/77 (48%)
Query: 755 LQNLCLELATMGDLKLVERPQNYTLAPESSKQIKANIKVSSTETGVIFGNIVYETSNVLE 814
L N L++ T D + ++ LAP + Q+ A + S T+T I ++ T+ +
Sbjct: 751 LTNKALQVMT--DFAIQFNRNSFGLAPAAPLQVHAPL--SPTQTVEI--SLPLSTAGSVM 804
Query: 815 RTVVVLNDIHIDIMDYI 831
+T LN + + + + I
Sbjct: 805 KTEP-LNSLQVAVKNNI 820
Score = 37 (18.1 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 524 QSAASETAFSPPTIVQGTLTSGNLRSLLLTGDFFLG 559
++A+SE+ SP T G L ++ GD LG
Sbjct: 596 RTASSESTESPETAPAGAPPGEQLDAVPTQGDL-LG 630
>RGD|2064 [details] [associations]
symbol:Ap1b1 "adaptor-related protein complex 1, beta 1 subunit"
species:10116 "Rattus norvegicus" [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030118 "clathrin
coat" evidence=IC] [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0030276 "clathrin binding" evidence=IC] [GO:0030665
"clathrin-coated vesicle membrane" evidence=IEA] [GO:0048268
"clathrin coat assembly" evidence=IDA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
RGD:2064 GO:GO:0005794 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565 GO:GO:0006897
GO:GO:0030276 GO:GO:0030118 GO:GO:0048268 eggNOG:COG5096
HOGENOM:HOG000163270 HOVERGEN:HBG050515 GO:GO:0030131 GO:GO:0030665
Gene3D:2.60.40.1150 Gene3D:3.30.310.10 InterPro:IPR012295
PANTHER:PTHR11134 SUPFAM:SSF55711 SUPFAM:SSF49348 CTD:162 KO:K12392
EMBL:M77245 IPI:IPI00201713 IPI:IPI00781585 PIR:B32105
RefSeq:NP_058973.1 UniGene:Rn.37383 PDB:1W63 PDBsum:1W63
ProteinModelPortal:P52303 SMR:P52303 IntAct:P52303 MINT:MINT-1344522
STRING:P52303 PhosphoSite:P52303 PRIDE:P52303 GeneID:29663
KEGG:rno:29663 UCSC:RGD:2064 EvolutionaryTrace:P52303 NextBio:609967
ArrayExpress:P52303 Genevestigator:P52303
GermOnline:ENSRNOG00000008786 Uniprot:P52303
Length = 949
Score = 210 (79.0 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 97/470 (20%), Positives = 197/470 (41%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
E+K L + K +A+KK I + G+ + LF +V + +++ ++KL+ LYL
Sbjct: 17 ELKAELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVN-CMQTDNLELKKLVYLYL-- 73
Query: 81 IDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
AK + P+M ++ N + + PN IR + +R + + +I E L + +
Sbjct: 74 --MNYAKSQ--PDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKC 129
Query: 140 LQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIE-KVLSTEQDPSAKRNAFLMLFTC 198
L+ PY+R+ A + V ++ + QL+ D + K L ++ +P N L
Sbjct: 130 LKDEDPYVRKTAAVCVAKLHDI--NAQLVEDQGFLDTLKDLISDSNPMVVANRVAALSEI 187
Query: 199 DQD-----------RAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXXXX 247
+ ++IN LLT ++ +EW Q+ +L+ + +
Sbjct: 188 AESHPSSNLLDLKAQSINKLLTALNECTEWA---QIFILDCLGNYMPKDDREAQSICERV 244
Query: 248 XSLLNAPSTAVIYECAGTLVS--------LSSAPTAIRAAANTYSQLLLSQSDNNVKLIV 299
L+ ++AV+ L+ L T ++ A LL ++ + + +
Sbjct: 245 TPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYATLLKKLAPPLVTLLSAEPEP--QYVP 302
Query: 300 LDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXX 359
L +N + +I+ + N P + ++ + LDI++ L + NI
Sbjct: 303 LRNINLIVQKRPEILKHEMKVFFVKYNDP-IYVKLEKLDIMIRLASQANI-------AQV 354
Query: 360 XXXTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAI-DVIIF 418
+ E + ++ + ++AI CAIK + A V L+D + + V + + I+
Sbjct: 355 LAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLI-QTKVNYVVQEAIVV 413
Query: 419 VREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVE 468
+++I P S+I L +N + +WI+GEY + + +
Sbjct: 414 IKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDNAD 463
Score = 40 (19.1 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 28/124 (22%), Positives = 49/124 (39%)
Query: 755 LQNLCLELATMGDLKLVERPQNYTLAPESSKQIKANIKVSST-ETGV---IFGNIV-YET 809
L N L++ T D + ++ LAP + Q+ A + + T E + G+++ E
Sbjct: 754 LTNKALQVMT--DFAIQFNRNSFGLAPAAPLQVHAPLSPNQTVEISLPLNTVGSVMKMEP 811
Query: 810 SNVLERTVVVLNDIHIDIMDYISPA---VCTDAA-----FRTMWAEFEWENKVSLALVSC 861
N L+ V V N+I + + P D F W + EN+ + C
Sbjct: 812 LNNLQ--VAVKNNIDVFYFSTLYPLHVLFVEDGKMDRQMFLATWKDIPNENEAQFQIRDC 869
Query: 862 FFHT 865
+T
Sbjct: 870 PLNT 873
>UNIPROTKB|P52303 [details] [associations]
symbol:Ap1b1 "AP-1 complex subunit beta-1" species:10116
"Rattus norvegicus" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013037 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883
Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020
InterPro:IPR013041 RGD:2064 GO:GO:0005794 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565
GO:GO:0006897 GO:GO:0030276 GO:GO:0030118 GO:GO:0048268
eggNOG:COG5096 HOGENOM:HOG000163270 HOVERGEN:HBG050515
GO:GO:0030131 GO:GO:0030665 Gene3D:2.60.40.1150 Gene3D:3.30.310.10
InterPro:IPR012295 PANTHER:PTHR11134 SUPFAM:SSF55711
SUPFAM:SSF49348 CTD:162 KO:K12392 EMBL:M77245 IPI:IPI00201713
IPI:IPI00781585 PIR:B32105 RefSeq:NP_058973.1 UniGene:Rn.37383
PDB:1W63 PDBsum:1W63 ProteinModelPortal:P52303 SMR:P52303
IntAct:P52303 MINT:MINT-1344522 STRING:P52303 PhosphoSite:P52303
PRIDE:P52303 GeneID:29663 KEGG:rno:29663 UCSC:RGD:2064
EvolutionaryTrace:P52303 NextBio:609967 ArrayExpress:P52303
Genevestigator:P52303 GermOnline:ENSRNOG00000008786 Uniprot:P52303
Length = 949
Score = 210 (79.0 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 97/470 (20%), Positives = 197/470 (41%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
E+K L + K +A+KK I + G+ + LF +V + +++ ++KL+ LYL
Sbjct: 17 ELKAELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVN-CMQTDNLELKKLVYLYL-- 73
Query: 81 IDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
AK + P+M ++ N + + PN IR + +R + + +I E L + +
Sbjct: 74 --MNYAKSQ--PDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKC 129
Query: 140 LQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIE-KVLSTEQDPSAKRNAFLMLFTC 198
L+ PY+R+ A + V ++ + QL+ D + K L ++ +P N L
Sbjct: 130 LKDEDPYVRKTAAVCVAKLHDI--NAQLVEDQGFLDTLKDLISDSNPMVVANRVAALSEI 187
Query: 199 DQD-----------RAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXXXX 247
+ ++IN LLT ++ +EW Q+ +L+ + +
Sbjct: 188 AESHPSSNLLDLKAQSINKLLTALNECTEWA---QIFILDCLGNYMPKDDREAQSICERV 244
Query: 248 XSLLNAPSTAVIYECAGTLVS--------LSSAPTAIRAAANTYSQLLLSQSDNNVKLIV 299
L+ ++AV+ L+ L T ++ A LL ++ + + +
Sbjct: 245 TPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYATLLKKLAPPLVTLLSAEPEP--QYVP 302
Query: 300 LDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXX 359
L +N + +I+ + N P + ++ + LDI++ L + NI
Sbjct: 303 LRNINLIVQKRPEILKHEMKVFFVKYNDP-IYVKLEKLDIMIRLASQANI-------AQV 354
Query: 360 XXXTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAI-DVIIF 418
+ E + ++ + ++AI CAIK + A V L+D + + V + + I+
Sbjct: 355 LAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLI-QTKVNYVVQEAIVV 413
Query: 419 VREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVE 468
+++I P S+I L +N + +WI+GEY + + +
Sbjct: 414 IKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDNAD 463
Score = 40 (19.1 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 28/124 (22%), Positives = 49/124 (39%)
Query: 755 LQNLCLELATMGDLKLVERPQNYTLAPESSKQIKANIKVSST-ETGV---IFGNIV-YET 809
L N L++ T D + ++ LAP + Q+ A + + T E + G+++ E
Sbjct: 754 LTNKALQVMT--DFAIQFNRNSFGLAPAAPLQVHAPLSPNQTVEISLPLNTVGSVMKMEP 811
Query: 810 SNVLERTVVVLNDIHIDIMDYISPA---VCTDAA-----FRTMWAEFEWENKVSLALVSC 861
N L+ V V N+I + + P D F W + EN+ + C
Sbjct: 812 LNNLQ--VAVKNNIDVFYFSTLYPLHVLFVEDGKMDRQMFLATWKDIPNENEAQFQIRDC 869
Query: 862 FFHT 865
+T
Sbjct: 870 PLNT 873
>GENEDB_PFALCIPARUM|MAL7P1.164 [details] [associations]
symbol:MAL7P1.164 "adapter-related protein,
putative" species:5833 "Plasmodium falciparum" [GO:0030130
"clathrin coat of trans-Golgi network vesicle" evidence=ISS]
[GO:0016192 "vesicle-mediated transport" evidence=ISS]
InterPro:IPR002553 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM01020 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565
GO:GO:0030131 PANTHER:PTHR11134 GO:GO:0030130 EMBL:AL844506
RefSeq:XP_001349197.2 ProteinModelPortal:Q8IBF8
EnsemblProtists:MAL7P1.164:mRNA GeneID:2654988 KEGG:pfa:MAL7P1.164
EuPathDB:PlasmoDB:PF3D7_0730200 HOGENOM:HOG000283882
ProtClustDB:CLSZ2500660 Uniprot:Q8IBF8
Length = 858
Score = 196 (74.1 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 115/477 (24%), Positives = 202/477 (42%)
Query: 20 NEIKEAL-----EGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQK-L 73
N++K+ L E ND K + +KK I + G + +LF I+ ++ S + IQK +
Sbjct: 9 NKLKDVLKKLPQEKND-DKKREVLKKVIAYMTLGVDVSKLFPDII--MISSTNDIIQKKM 65
Query: 74 LLLYLEIIDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPL 132
+ LYL +T++ E+ L+ N L+ + + + IRG+ LR C L + E +
Sbjct: 66 IYLYLNNYAETNS------ELSLLTINTLQKDSKDDDPIIRGLALRTFCNLRINNLFEYI 119
Query: 133 IPSVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLSTEQDPSAKRNAF 192
+ L ++ Y+RR AI++ + + K+ + D ++++ L ++DP N+
Sbjct: 120 EGPLFNGLNDKNSYVRRIAIISCVKLIKMNPDLSIRNDIIKILKNKL-LDKDPQCIINSV 178
Query: 193 LML--FTCDQ-----DRAINY-LLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXX 244
L D+ ++ I + +L + +EWG+ V+L ++ N
Sbjct: 179 HALNEILIDEGGLKVNKEIVFNMLNKLSHFNEWGK---SVILYIVSTYIPENEDEMYDIM 235
Query: 245 XXXXSLLNAPSTAVIYECAGTLVSLSSAPT--AIRAAANTYSQLL--LSQSDNNVKLIVL 300
+ + S+ V C ++ S T I+ LL +S S N + IVL
Sbjct: 236 NILENHIRDFSSTVFLACLKCFLNFSINDTNLQIQIFQRMKDPLLTLISTSSNEIAYIVL 295
Query: 301 DRLNELRSSHRDIMVDLI-MDVLRALNSPN--LDIRRKTLDIVLELITPRNINXXXXXXX 357
N L + + D N I+ LDI++ + + N+
Sbjct: 296 LHTNLLLHEANKLNYKIFDYDYKHFFFRYNDLTYIKDIKLDILVSVASKNNVVLIINELS 355
Query: 358 XXXXXTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHL-LMDFL--GDSNVASA-I 413
+ N E Q I++I S A+K P+ S VV L L +F+ S + SA I
Sbjct: 356 EYIS-------DANVEIAQKAIESIGSIALKIPKCISRVVELSLSNFMTMNYSYICSATI 408
Query: 414 DVIIFVREIIEMNPKLRVSII----TRLLDNFYQIRAARVCTCALWIIGEYCQSLSE 466
+++ + E KL + I RL+DN I +WIIGEYC+ + E
Sbjct: 409 KILVNILRKYEEYTKLIIEEIIKHGNRLIDNGGIISY-------IWIIGEYCEYIEE 458
>UNIPROTKB|Q8IBF8 [details] [associations]
symbol:MAL7P1.164 "Adapter-related protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0016192
"vesicle-mediated transport" evidence=ISS] [GO:0030130 "clathrin
coat of trans-Golgi network vesicle" evidence=ISS]
InterPro:IPR002553 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM01020 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565
GO:GO:0030131 PANTHER:PTHR11134 GO:GO:0030130 EMBL:AL844506
RefSeq:XP_001349197.2 ProteinModelPortal:Q8IBF8
EnsemblProtists:MAL7P1.164:mRNA GeneID:2654988 KEGG:pfa:MAL7P1.164
EuPathDB:PlasmoDB:PF3D7_0730200 HOGENOM:HOG000283882
ProtClustDB:CLSZ2500660 Uniprot:Q8IBF8
Length = 858
Score = 196 (74.1 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 115/477 (24%), Positives = 202/477 (42%)
Query: 20 NEIKEAL-----EGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQK-L 73
N++K+ L E ND K + +KK I + G + +LF I+ ++ S + IQK +
Sbjct: 9 NKLKDVLKKLPQEKND-DKKREVLKKVIAYMTLGVDVSKLFPDII--MISSTNDIIQKKM 65
Query: 74 LLLYLEIIDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPL 132
+ LYL +T++ E+ L+ N L+ + + + IRG+ LR C L + E +
Sbjct: 66 IYLYLNNYAETNS------ELSLLTINTLQKDSKDDDPIIRGLALRTFCNLRINNLFEYI 119
Query: 133 IPSVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLSTEQDPSAKRNAF 192
+ L ++ Y+RR AI++ + + K+ + D ++++ L ++DP N+
Sbjct: 120 EGPLFNGLNDKNSYVRRIAIISCVKLIKMNPDLSIRNDIIKILKNKL-LDKDPQCIINSV 178
Query: 193 LML--FTCDQ-----DRAINY-LLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXX 244
L D+ ++ I + +L + +EWG+ V+L ++ N
Sbjct: 179 HALNEILIDEGGLKVNKEIVFNMLNKLSHFNEWGK---SVILYIVSTYIPENEDEMYDIM 235
Query: 245 XXXXSLLNAPSTAVIYECAGTLVSLSSAPT--AIRAAANTYSQLL--LSQSDNNVKLIVL 300
+ + S+ V C ++ S T I+ LL +S S N + IVL
Sbjct: 236 NILENHIRDFSSTVFLACLKCFLNFSINDTNLQIQIFQRMKDPLLTLISTSSNEIAYIVL 295
Query: 301 DRLNELRSSHRDIMVDLI-MDVLRALNSPN--LDIRRKTLDIVLELITPRNINXXXXXXX 357
N L + + D N I+ LDI++ + + N+
Sbjct: 296 LHTNLLLHEANKLNYKIFDYDYKHFFFRYNDLTYIKDIKLDILVSVASKNNVVLIINELS 355
Query: 358 XXXXXTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHL-LMDFL--GDSNVASA-I 413
+ N E Q I++I S A+K P+ S VV L L +F+ S + SA I
Sbjct: 356 EYIS-------DANVEIAQKAIESIGSIALKIPKCISRVVELSLSNFMTMNYSYICSATI 408
Query: 414 DVIIFVREIIEMNPKLRVSII----TRLLDNFYQIRAARVCTCALWIIGEYCQSLSE 466
+++ + E KL + I RL+DN I +WIIGEYC+ + E
Sbjct: 409 KILVNILRKYEEYTKLIIEEIIKHGNRLIDNGGIISY-------IWIIGEYCEYIEE 458
>ASPGD|ASPL0000012367 [details] [associations]
symbol:AN4207 species:162425 "Emericella nidulans"
[GO:0016197 "endosomal transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0005768 "endosome"
evidence=IEA] [GO:0030121 "AP-1 adaptor complex" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR016024
InterPro:IPR017107 Pfam:PF01602 Pfam:PF02883 PIRSF:PIRSF037094
SMART:SM00809 InterPro:IPR013041 InterPro:IPR008153 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 EMBL:BN001302 GO:GO:0030131 SUPFAM:SSF49348
eggNOG:NOG303101 HOGENOM:HOG000210271 KO:K12391 Gene3D:2.60.40.1230
PANTHER:PTHR22780:SF5 PROSITE:PS50180 GO:GO:0044431
OrthoDB:EOG4X9BRC EMBL:AACD01000068 RefSeq:XP_661811.1
ProteinModelPortal:Q5B5H3 SMR:Q5B5H3 STRING:Q5B5H3
EnsemblFungi:CADANIAT00004455 GeneID:2873629 KEGG:ani:AN4207.2
OMA:DCASGVF Uniprot:Q5B5H3
Length = 839
Score = 134 (52.2 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 59/255 (23%), Positives = 110/255 (43%)
Query: 221 LQMVVLELIRKVCRTNXXXXXXXXXXXXSLL-NAPST-----AVIYECAGTLVSLSSAPT 274
+Q+ +L L+R + R + + N S+ A++YE T++ + A +
Sbjct: 250 VQVKILRLLRVLARGDTATSELINDILAQVATNTDSSKNVGNAILYEAVLTILDIE-ADS 308
Query: 275 AIRAAANTYSQLLLSQSDNNVKLIVLDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRR 334
+R L+ DNN++ + L+ LN++ + + + VL L P++ IRR
Sbjct: 309 GLRVLGVNILGKFLTNKDNNIRYVALNTLNKVVAIEPNAVQRHRNTVLECLRDPDISIRR 368
Query: 335 KTLDIVLELITPRNINXXXXXXXXXXXXTQSGELEKNGEYRQMLIQAIHSCAIKF-PEV- 392
+ LD+ LI N+ E+ N E++ + I A ++ P
Sbjct: 369 RALDLSFMLINESNVRVLVRELLAFL------EVADN-EFKPTMTTQIGIAADRYAPNKR 421
Query: 393 --ASTVVHLLMDFLGDSNVASAIDVIIFVREIIEMNPKLRVSIITRLLDNFYQ-IRAARV 449
A T++ +L L + V I + FVR +I P+L+ + +L + + I +
Sbjct: 422 WHADTILRVLK--LAGAYVKEQI-LSSFVR-LIATTPELQTYSVQKLYVSLKEDISQEGL 477
Query: 450 CTCALWIIGEYCQSL 464
A W+IGEY +L
Sbjct: 478 TLAATWLIGEYGDNL 492
Score = 113 (44.8 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 49/165 (29%), Positives = 73/165 (44%)
Query: 13 KGTPAIANEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQK 72
K + AI +E E +D + + + K + L GE I ++ +L S H
Sbjct: 26 KESAAIRASFRE--ESHDSSIRRNNVAKLLYLFTLGERTHFGQIECLK-LLAS--HRFAD 80
Query: 73 LLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPL 132
L YL + D VL L+ +L+N+L H N+YI G++L L + E+ L
Sbjct: 81 KRLGYLGTMLLLDENQEVLT---LVTNSLKNDLNHSNQYIVGLSLCTLGNIASVEMSRDL 137
Query: 133 IPSVLQNLQHRHPYIRRNAILAVMAIY-KLPQ-GEQLLVDAPEMI 175
V L +PYIRR A L M I K+P E L A ++
Sbjct: 138 FTEVESLLSTANPYIRRKAALCAMRICRKVPDLQEHFLEKAKNLL 182
>FB|FBgn0003210 [details] [associations]
symbol:rb "ruby" species:7227 "Drosophila melanogaster"
[GO:0006727 "ommochrome biosynthetic process" evidence=IMP]
[GO:0030135 "coated vesicle" evidence=TAS] [GO:0008021 "synaptic
vesicle" evidence=TAS] [GO:0016183 "synaptic vesicle coating"
evidence=TAS] [GO:0006901 "vesicle coating" evidence=TAS]
[GO:0008057 "eye pigment granule organization" evidence=NAS]
[GO:0006726 "eye pigment biosynthetic process" evidence=TAS]
[GO:0007040 "lysosome organization" evidence=ISS] [GO:0016192
"vesicle-mediated transport" evidence=NAS] [GO:0030123 "AP-3
adaptor complex" evidence=ISS] [GO:0046907 "intracellular
transport" evidence=TAS] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0031396 "regulation of protein
ubiquitination" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0007220 "Notch receptor processing"
evidence=IMP] [GO:0006897 "endocytosis" evidence=IMP] [GO:0060967
"negative regulation of gene silencing by RNA" evidence=IMP]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR026739
InterPro:IPR026740 Pfam:PF01602 PIRSF:PIRSF037096 GO:GO:0008340
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0008021 EMBL:AE014298 GO:GO:0007040 GO:GO:0007220
GO:GO:0046907 PANTHER:PTHR11134 GO:GO:0016183
GeneTree:ENSGT00530000063546 KO:K12397 GO:GO:0030123
PANTHER:PTHR11134:SF1 GO:GO:0060967 GO:GO:0006727 GO:GO:0031396
ChiTaRS:RB1 RefSeq:NP_001162664.1 UniGene:Dm.1682
ProteinModelPortal:E1JJE0 SMR:E1JJE0 EnsemblMetazoa:FBtr0301530
GeneID:31381 KEGG:dme:Dmel_CG11427 CTD:31381 FlyBase:FBgn0003210
OMA:LIGEYNE PhylomeDB:E1JJE0 GenomeRNAi:31381 NextBio:773356
Bgee:E1JJE0 Uniprot:E1JJE0
Length = 1178
Score = 156 (60.0 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 56/225 (24%), Positives = 115/225 (51%)
Query: 20 NEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLE 79
+++K+ L+ N K++AMK+ I ++ G LF +V+ V+ S++ ++KL+ +YL
Sbjct: 46 DDLKQMLDSNKDGLKLEAMKRIIGMIARGRDASDLFPAVVKNVV-SKNIEVKKLVYVYL- 103
Query: 80 IIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
+ + + + +L + L+ PN+ IR LR L + + I+ ++ ++ +
Sbjct: 104 -VRYAEEQQDLA---LLSISTFQRALKDPNQLIRASALRVLSSIRVSMIVPIVMLAIRDS 159
Query: 140 LQHRHPYIRRNAILAVMAIYKLP--QGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLF- 196
PY+R+ A A+ +Y L Q ++L++ +IEK+LS ++ +A +M F
Sbjct: 160 AADLSPYVRKTAAHAIPKLYSLDADQKDELVM----VIEKLLS-DRTTLVVGSA-VMAFD 213
Query: 197 -TCDQDRAI---NY--LLTHVDRVSEWGELLQMVVLELIRKVCRT 235
C + + NY L + V EWG Q++++ ++ + RT
Sbjct: 214 EVCPERVDLIHKNYRKLCNFLLDVDEWG---QVIIINMLTRYART 255
Score = 93 (37.8 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 43/213 (20%), Positives = 87/213 (40%)
Query: 250 LLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLDRLNELRSS 309
LL + + +V+ A L + ++ A +LL S + V+ +VL+ + + +
Sbjct: 343 LLQSRNASVVMAVA-QLYHHVAPKNEVQLIAKALIRLLRSHKE--VQSVVLNCIASMSTK 399
Query: 310 HRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQSGELE 369
+ I + + P I+ LDI+ L + +I+ +
Sbjct: 400 RKAIFEPHLKSFFVRTSDPT-HIKLLKLDILTNLASAGSISLILREFQTYISSSDRS--- 455
Query: 370 KNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVREIIEMNPKL 429
+ IQAI CA EV T + L+ L + + + ++ ++ +++
Sbjct: 456 ----FVAATIQAIGRCASSIKEVTETCLSGLVHLLSNHDEHVVAESVVVIKRLLQTKAAE 511
Query: 430 RVSIITRL--LDNFYQIRAARVCTCALWIIGEY 460
IIT++ L ++ + AAR +W+IGEY
Sbjct: 512 HFEIITQMAKLIDYINVPAARAAI--IWLIGEY 542
>UNIPROTKB|Q7Z451 [details] [associations]
symbol:AP2B1 "AP-2 complex subunit beta" species:9606 "Homo
sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013037 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883
Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020
InterPro:IPR013041 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565 HOVERGEN:HBG050515
GO:GO:0030131 Gene3D:2.60.40.1150 Gene3D:3.30.310.10
InterPro:IPR012295 PANTHER:PTHR11134 SUPFAM:SSF55711
SUPFAM:SSF49348 EMBL:AC006237 EMBL:CH471147 UniGene:Hs.514819
HGNC:HGNC:563 ChiTaRS:AP2B1 EMBL:AC015911 EMBL:AC004134
EMBL:AY341427 IPI:IPI00790702 SMR:Q7Z451 STRING:Q7Z451
Ensembl:ENST00000538556 Uniprot:Q7Z451
Length = 880
Score = 188 (71.2 bits), Expect = 9.5e-11, P = 9.5e-11
Identities = 89/429 (20%), Positives = 179/429 (41%)
Query: 63 LPSEDHTIQKLLLLYLEIIDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLC 121
+ +++ ++KL+ LYL AK + P+M ++ N + + PN IR + +R +
Sbjct: 1 MQTDNLELKKLVYLYL----MNYAKSQ--PDMAIMAVNSFVKDCEDPNPLIRALAVRTMG 54
Query: 122 RLNETEIIEPLIPSVLQNLQHRHPYIRRNAILAVMAIYKL------PQG-----EQLLVD 170
+ +I E L + + L+ PY+R+ A + V ++ + QG L+ D
Sbjct: 55 CIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIAD 114
Query: 171 A-PEMIEKVLSTEQDPSAKRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELI 229
+ P ++ ++ + S +L Q+ IN LLT ++ +EWG Q+ +L+ +
Sbjct: 115 SNPMVVANAVAALSEISESHPNSNLLDLNPQN--INKLLTALNECTEWG---QIFILDCL 169
Query: 230 RKVCRTNXXXXXXXXXXXXSLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLL-- 287
+ L+ ++AV+ L+ + ++ Y+ LL
Sbjct: 170 SNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLEL---LPKDSDYYNMLLKK 226
Query: 288 -------LSQSDNNVKLIVLDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIV 340
L + V+ + L +N + +I+ I N P + ++ + LDI+
Sbjct: 227 LAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDP-IYVKLEKLDIM 285
Query: 341 LELITPRNINXXXXXXXXXXXXTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLL 400
+ L + NI + E + ++ + ++AI CAIK + A V L
Sbjct: 286 IRLASQANI-------AQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTL 338
Query: 401 MDFLGDSNVASAI-DVIIFVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGE 459
+D + + V + + I+ +R+I P SII L +N + +WI+GE
Sbjct: 339 LDLI-QTKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGE 397
Query: 460 YCQSLSEVE 468
Y + + +
Sbjct: 398 YAERIDNAD 406
>UNIPROTKB|G4NIQ6 [details] [associations]
symbol:MGG_04150 "AP-2 complex subunit beta" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602
PIRSF:PIRSF002291 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0030117 GO:GO:0016192 GO:GO:0008565
PANTHER:PTHR11134 EMBL:CM001236 RefSeq:XP_003719679.1
EnsemblFungi:MGG_04150T0 GeneID:2677629 KEGG:mgr:MGG_04150
Uniprot:G4NIQ6
Length = 724
Score = 185 (70.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 95/465 (20%), Positives = 190/465 (40%)
Query: 33 AKVDAMKKAIM-LLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEIIDKTDAKGRVL 91
AK A+KK + + ++ + LF ++ + E I+K+ L+L ++ R+
Sbjct: 36 AKKIALKKIVANMTMSNNDMVALFPDVIG-CMHIESLEIKKMCFLFL--VNYA----RMR 88
Query: 92 PEM-ILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNLQHRHPYIRRN 150
PE+ I L +++ N +R + LR + ++ E +E +P V Q L+ PY+R+
Sbjct: 89 PEIAIKAIPVLEYDMRDSNPLVRALALRTMSYIHVREFVEATVPIVKQMLKDSDPYVRKT 148
Query: 151 AILAVMAIYKLPQGEQLLVDAPEMIEKV--LSTEQDPSAKRNAFLMLFTC-DQDRAINYL 207
A V +Y ++ +V+ ++I+++ L + +P+ +A L ++ AI
Sbjct: 149 AAFCVAKLY---DHDKQMVEQSDLIDRLNGLLRDDNPTVVASALASLMDIWERSDAIKLT 205
Query: 208 LTH---------VDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXXXXXSLLNAPSTAV 258
+ + + SEWG Q +LE + + L+ ++AV
Sbjct: 206 IDYGNASKMVAILPDCSEWG---QTYILEALMSYLPVDSGEALLLAERIAPRLSHSNSAV 262
Query: 259 IYECAGTLVSLS---SAPTAIRAAANTYSQLLLSQSDNNVKLIVLDRLNELRSSHR--DI 313
+ C ++ L S I A S L++ ++ L N L R ++
Sbjct: 263 VLTCIRVILYLMNYISDQKQISALCRKLSPPLVTLLAKGPEVQYLALRNALLILQRRPEV 322
Query: 314 MVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQSGELEKNGE 373
+ + I N P + ++ L+++ L RNI+ E++ +
Sbjct: 323 LRNDIRVFFCKYNDP-IYVKVTKLELIFMLANERNIDEVLTELREYAT-----EIDVH-- 374
Query: 374 YRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVREIIEMNPKLRVSI 433
+ + ++AI AIK A + LL++ + + + +R I P SI
Sbjct: 375 FVRKAVRAIGKLAIKIEPAAPRCIDLLLELVATKVTYIVQEATVVIRNIFRKYPNQYESI 434
Query: 434 ITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCL 478
I L ++ + +W+IG+Y S +EN A ++ L
Sbjct: 435 IGTLCEHLDSLDEPEAKAAMVWVIGQYA---SRIENSDALLEDFL 476
>UNIPROTKB|E1BWK3 [details] [associations]
symbol:AP3D1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR017105 Pfam:PF01602 PIRSF:PIRSF037092 GO:GO:0005794
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0030117 GO:GO:0016192 GO:GO:0008565 CTD:8943
GeneTree:ENSGT00550000075067 KO:K12396 InterPro:IPR010474
Pfam:PF06375 EMBL:AADN02066738 IPI:IPI00819277
RefSeq:XP_003642902.1 UniGene:Gga.55207 Ensembl:ENSGALT00000041197
GeneID:420079 KEGG:gga:420079 ArrayExpress:E1BWK3 Uniprot:E1BWK3
Length = 1153
Score = 187 (70.9 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 109/484 (22%), Positives = 206/484 (42%)
Query: 20 NEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLE 79
+EIK+ L+ +++ K +A+ K L + G + I+ V+ + T +++ YL
Sbjct: 41 DEIKQELKQDNIAVKANAVCKLTYLQMLGYDISWAAFNIIE-VMSASKFTFKRIG--YLA 97
Query: 80 IIDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQ 138
+ +G ++I++ N +R +L PN+Y GV L L ++ L ++
Sbjct: 98 A-SQCFHEGT---DVIMLTTNQIRKDLSSPNQYDTGVALTGLSCFVTPDLARDLANDIMT 153
Query: 139 NLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLFTC 198
+ H PYIR+ A+L + ++ L E L P + EK+ + DP + A ++
Sbjct: 154 LMSHTKPYIRKKAVLIMYKVF-LKYPESLRPAFPRLKEKL--EDPDPGVQSAAVNVICEL 210
Query: 199 DQDRAINYL----LTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXXXXXSLLNAP 254
+ NYL L S + + +++L + +L+++
Sbjct: 211 ARRNPKNYLSLAPLFFKLMTSSTNNWVLIKIIKLFGALTPLEPRLGKKLIEPLTNLIHST 270
Query: 255 ST-AVIYECAGT----LVSLSSAPTAIRAAANTYSQ---LLLSQSDNNVKLIVLDRLNEL 306
S +++YEC T L+SLSS A+ Q +L+ SD N+K + L ++++
Sbjct: 271 SAMSLLYECVNTVIAVLISLSSGMPNHSASIQLCVQKLRILIEDSDQNLKYLGLLAMSKI 330
Query: 307 RSSHRDIMVDLIMD-VLRALNSPNLDIRRKTLDIVLELITPRN----INXXXXXXXXXXX 361
+H V D +L+ L+ + IR + LD++ +++ +N +
Sbjct: 331 LKTHPK-SVQSHKDLILQCLDDKDESIRLRALDLLYGMVSKKNLMEIVKKLMIHVDKAEG 389
Query: 362 XTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLL-MDFLGDSNVASA--IDVIIF 418
T EL + + Q+ + F S +V L ++ ++ +A +DV I
Sbjct: 390 TTYRDELLT--KIIDICSQSNYQYITNFEWYISILVELTRLEGTRHGHLIAAQMLDVAIR 447
Query: 419 VREIIEMNPKLRVSIITRLLDNFYQIRA--ARVCTC-ALWIIGEYCQSLSE-VENGIATI 474
V+ I K VS + LLDN + I + R C L+ C SE +E T+
Sbjct: 448 VKAI----RKFAVSQMAMLLDNAHLIASNTQRNGICEVLYAAAWICGEFSEHLEEANQTL 503
Query: 475 KQCL 478
+ L
Sbjct: 504 EAML 507
>POMBASE|SPBC947.02 [details] [associations]
symbol:apl2 "AP-1 adaptor complex subunit beta subunit
Apl2" species:4896 "Schizosaccharomyces pombe" [GO:0005768
"endosome" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005905 "coated pit" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IC] [GO:0006995 "cellular response to
nitrogen starvation" evidence=IMP] [GO:0008565 "protein transporter
activity" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IMP] [GO:0016197 "endosomal transport" evidence=IMP]
[GO:0030121 "AP-1 adaptor complex" evidence=IDA] [GO:0030276
"clathrin binding" evidence=IC] [GO:0070317 "negative regulation of
G0 to G1 transition" evidence=IMP] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 PIRSF:PIRSF002291 PomBase:SPBC947.02 GO:GO:0005886
GO:GO:0006886 SUPFAM:SSF48371 GO:GO:0070317 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565 GO:GO:0005768
EMBL:CU329671 GO:GO:0005905 GenomeReviews:CU329671_GR GO:GO:0016197
GO:GO:0030121 GO:GO:0030276 eggNOG:COG5096 HOGENOM:HOG000163270
PANTHER:PTHR11134 PIR:T40780 RefSeq:NP_595274.1
ProteinModelPortal:O43079 STRING:O43079 EnsemblFungi:SPBC947.02.1
GeneID:2541255 KEGG:spo:SPBC947.02 OMA:KECENAD OrthoDB:EOG49GPQW
NextBio:20802367 GO:GO:0006995 Uniprot:O43079
Length = 683
Score = 182 (69.1 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 96/457 (21%), Positives = 195/457 (42%)
Query: 20 NEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLE 79
+E+++ L ++DA+K+ I + G+ + LF +++ L + D T++KL+ LYL
Sbjct: 20 SELQKGLVSQYAYERIDAVKRTIAAMTVGKDVSSLFPDVLKN-LATRDITLKKLVYLYLI 78
Query: 80 IIDKTDAKGRVLPEMILICQN--LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVL 137
KT P++ ++ N ++++ ++ N +R + +R + + +II L +
Sbjct: 79 NYAKTH------PDLCILAVNTFVKDSEEY-NPTLRALAIRTMGCIRVNKIIGYLADPLR 131
Query: 138 QNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLFT 197
+ L+ HPY+R+ A + V+ +Y L + E ++ ++S + +P NA L
Sbjct: 132 KALKDEHPYVRKAAAVCVVKMYDLDREYCASNGFIEQLQALVS-DPNPVVVANAVRSLAE 190
Query: 198 C-DQDRA---INYLLTHVDRV----SEWGELLQMVVLELIRKVCRTNXXXXXXXXXXXX- 248
DQD N + T DR+ SE E ++ +L + + RT+
Sbjct: 191 IHDQDPEKGYFNVVYTMTDRLMVALSECNEWGRITILNSLARF-RTSDIKEAEYVCERVV 249
Query: 249 -SLLNAPSTAVIYECAGTLVSL---SSAPTAIRAAANTYSQLLLSQSDNNVKLIVLDRLN 304
+A S V+ +V + SS T L L +D+ ++ + L +N
Sbjct: 250 PQFQHANSGVVLSAVKVIMVHIPLFSSDFTDFLYKKMAPPLLTLLSTDSEIQYVALRNIN 309
Query: 305 ELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQ 364
L R + D+ V + L I+ + L I+ L NIN
Sbjct: 310 -LILQKRPSIFDVKTRVFFCKYNDPLYIKMEKLKIITMLACDENINETISELRAYVS--- 365
Query: 365 SGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVREIIE 424
E+E E+ + I+ + A+K P V + + + ++ + N++ + + V E +
Sbjct: 366 --EVEL--EFVKQTIKCLGDVALKVPSVINDCISIFLEIY-ELNISYMVQEVTVVMETVL 420
Query: 425 MNPKLRVSIITRLLDNFYQ-IRAARVCTCALWIIGEY 460
++ ++ L + + R + WI+GE+
Sbjct: 421 RKYPQKIDLLLPYLSRVIEELGDPRARSSMAWILGEF 457
>UNIPROTKB|O14617 [details] [associations]
symbol:AP3D1 "AP-3 complex subunit delta-1" species:9606
"Homo sapiens" [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0033365
"protein localization to organelle" evidence=IEA] [GO:0043195
"terminal bouton" evidence=IEA] [GO:0048007 "antigen processing and
presentation, exogenous lipid antigen via MHC class Ib"
evidence=IEA] [GO:0048499 "synaptic vesicle membrane organization"
evidence=IEA] [GO:0051138 "positive regulation of NK T cell
differentiation" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0010008 "endosome membrane" evidence=IDA]
[GO:0048490 "anterograde synaptic vesicle transport" evidence=ISS]
[GO:0008089 "anterograde axon cargo transport" evidence=ISS]
[GO:0005215 "transporter activity" evidence=TAS] [GO:0005794 "Golgi
apparatus" evidence=TAS] [GO:0006726 "eye pigment biosynthetic
process" evidence=TAS] [GO:0061088 "regulation of sequestering of
zinc ion" evidence=IMP] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR017105 Pfam:PF01602 PIRSF:PIRSF037092 GO:GO:0005794
GO:GO:0006886 GO:GO:0000139 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 PROSITE:PS50077 GO:GO:0030117 GO:GO:0008565
GO:GO:0005215 GO:GO:0010008 GO:GO:0008089 GO:GO:0033365
eggNOG:COG5096 GO:GO:0048490 GO:GO:0048007 GO:GO:0051138 CTD:8943
HOGENOM:HOG000000981 KO:K12396 OMA:VCKLTYL GO:GO:0061088
GO:GO:0048499 InterPro:IPR010474 Pfam:PF06375 EMBL:AF002163
EMBL:U91930 EMBL:AB208804 EMBL:AC005545 EMBL:BC010065 EMBL:AF130042
IPI:IPI00289608 IPI:IPI00411453 IPI:IPI00411677 IPI:IPI00413686
IPI:IPI00719680 RefSeq:NP_001248755.1 RefSeq:NP_003929.4
UniGene:Hs.512815 PDB:4AFI PDBsum:4AFI ProteinModelPortal:O14617
SMR:O14617 IntAct:O14617 STRING:O14617 PhosphoSite:O14617
PaxDb:O14617 PRIDE:O14617 Ensembl:ENST00000345016
Ensembl:ENST00000355272 GeneID:8943 KEGG:hsa:8943 UCSC:uc002luy.3
UCSC:uc002luz.3 UCSC:uc002lva.3 GeneCards:GC19M002101
H-InvDB:HIX0014607 HGNC:HGNC:568 MIM:607246 neXtProt:NX_O14617
PharmGKB:PA24859 HOVERGEN:HBG050520 ChiTaRS:AP3D1 GenomeRNAi:8943
NextBio:33636 ArrayExpress:O14617 Bgee:O14617 CleanEx:HS_AP3D1
Genevestigator:O14617 GermOnline:ENSG00000065000 GO:GO:0006726
Uniprot:O14617
Length = 1153
Score = 182 (69.1 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 77/344 (22%), Positives = 157/344 (45%)
Query: 20 NEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLE 79
+EIK+ L+ +++ K +A+ K L + G + I+ V+ + T +++ YL
Sbjct: 41 DEIKQELKQDNIAVKANAVCKLTYLQMLGYDISWAAFNIIE-VMSASKFTFKRIG--YLA 97
Query: 80 IIDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQ 138
++ +G ++I++ N +R +L P++Y GV L L ++ L ++
Sbjct: 98 A-SQSFHEGT---DVIMLTTNQIRKDLSSPSQYDTGVALTGLSCFVTPDLARDLANDIMT 153
Query: 139 NLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLFTC 198
+ H PYIR+ A+L + ++ L E L P + EK+ + DP + A ++
Sbjct: 154 LMSHTKPYIRKKAVLIMYKVF-LKYPESLRPAFPRLKEKL--EDPDPGVQSAAVNVICEL 210
Query: 199 DQDRAINYL----LTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXXXXXSLLNAP 254
+ NYL L S + + +++L + +L+++
Sbjct: 211 ARRNPKNYLSLAPLFFKLMTSSTNNWVLIKIIKLFGALTPLEPRLGKKLIEPLTNLIHST 270
Query: 255 ST-AVIYECAGT----LVSLSSAPTAIRAAANTYSQ---LLLSQSDNNVKLIVLDRLNEL 306
S +++YEC T L+SLSS A+ Q +L+ SD N+K + L ++++
Sbjct: 271 SAMSLLYECVNTVIAVLISLSSGMPNHSASIQLCVQKLRILIEDSDQNLKYLGLLAMSKI 330
Query: 307 RSSHRDIMVDLIMD-VLRALNSPNLDIRRKTLDIVLELITPRNI 349
+H V D +L+ L+ + IR + LD++ +++ +N+
Sbjct: 331 LKTHPK-SVQSHKDLILQCLDDKDESIRLRALDLLYGMVSKKNL 373
>UNIPROTKB|Q865S1 [details] [associations]
symbol:AP3D1 "AP-3 complex subunit delta-1" species:9913
"Bos taurus" [GO:0048490 "anterograde synaptic vesicle transport"
evidence=ISS] [GO:0008089 "anterograde axon cargo transport"
evidence=ISS] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0061088 "regulation of sequestering of zinc ion" evidence=IEA]
[GO:0051138 "positive regulation of NK T cell differentiation"
evidence=IEA] [GO:0048499 "synaptic vesicle membrane organization"
evidence=IEA] [GO:0048007 "antigen processing and presentation,
exogenous lipid antigen via MHC class Ib" evidence=IEA] [GO:0043195
"terminal bouton" evidence=IEA] [GO:0033365 "protein localization
to organelle" evidence=IEA] [GO:0010008 "endosome membrane"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR017105 Pfam:PF01602
PIRSF:PIRSF037092 GO:GO:0006886 GO:GO:0000139 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0030117
GO:GO:0008565 GO:GO:0010008 GO:GO:0008089 GO:GO:0033365
eggNOG:COG5096 GO:GO:0048490 GO:GO:0048007 GO:GO:0051138
EMBL:AB015979 EMBL:S75828 EMBL:M98430 IPI:IPI00685602
RefSeq:NP_776423.3 UniGene:Bt.8223 ProteinModelPortal:Q865S1
STRING:Q865S1 PRIDE:Q865S1 Ensembl:ENSBTAT00000011906 GeneID:281023
KEGG:bta:281023 CTD:8943 GeneTree:ENSGT00550000075067
HOGENOM:HOG000000981 HOVERGEN:HBG004853 InParanoid:Q865S1 KO:K12396
OMA:VCKLTYL OrthoDB:EOG45TCMD NextBio:20805113 ArrayExpress:Q865S1
GO:GO:0061088 GO:GO:0048499 InterPro:IPR010474 Pfam:PF06375
Uniprot:Q865S1
Length = 1207
Score = 181 (68.8 bits), Expect = 8.2e-10, P = 8.2e-10
Identities = 78/344 (22%), Positives = 156/344 (45%)
Query: 20 NEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLE 79
+EIK+ L+ +++ K +A+ K L + G + I+ V+ + T +++ YL
Sbjct: 41 DEIKQELKQDNIAVKANAVCKLTYLQMLGYDISWAAFNIIE-VMSASKFTFKRIG--YLA 97
Query: 80 IIDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQ 138
+ +G ++I++ N +R +L P++Y GV L L ++ L ++
Sbjct: 98 A-SQCFHEGT---DVIMLTTNQIRKDLSSPSQYDTGVALTGLSCFVTPDLARDLANDIMT 153
Query: 139 NLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLFTC 198
+ H PYIR+ A+L + ++ L E L P + EK+ + DP + A ++
Sbjct: 154 LMSHTKPYIRKKAVLIMYKVF-LKYPESLRPAFPRLKEKL--EDPDPGVQSAAVNVICEL 210
Query: 199 DQDRAINYL----LTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXXXXXSLLNAP 254
+ NYL L S + + +++L + +L+++
Sbjct: 211 ARRNPKNYLSLAPLFFKLMTSSTNNWVLIKIIKLFGALTPLEPRLGKKLIEPLTNLIHST 270
Query: 255 ST-AVIYECAGT----LVSLSSAPTAIRAAANTYSQ---LLLSQSDNNVKLIVLDRLNEL 306
S +++YEC T L+SLSS A+ Q +L+ SD N+K + L ++++
Sbjct: 271 SAMSLLYECVNTVIAVLISLSSGMPNHSASIQLCVQKLRILIEDSDQNLKYLGLLAMSKI 330
Query: 307 RSSHRDIMVDLIMD-VLRALNSPNLDIRRKTLDIVLELITPRNI 349
+H V D VL+ L+ + IR + LD++ +++ +N+
Sbjct: 331 LRTHPK-SVQAHKDLVLQCLDDKDESIRLRALDLLYGMVSKKNL 373
>UNIPROTKB|E2QXV5 [details] [associations]
symbol:AP3D1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030117 "membrane coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR017105 Pfam:PF01602 PIRSF:PIRSF037092 GO:GO:0005794
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0030117 GO:GO:0016192 GO:GO:0008565
GeneTree:ENSGT00550000075067 OMA:VCKLTYL InterPro:IPR010474
Pfam:PF06375 EMBL:AAEX03012612 Ensembl:ENSCAFT00000030886
Uniprot:E2QXV5
Length = 1216
Score = 181 (68.8 bits), Expect = 8.3e-10, P = 8.3e-10
Identities = 78/344 (22%), Positives = 156/344 (45%)
Query: 20 NEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLE 79
+EIK+ L+ +++ K +A+ K L + G + I+ V+ + T +++ YL
Sbjct: 41 DEIKQELKQDNIAVKANAVCKLTYLQMLGYDISWAAFNIIE-VMSASKFTFKRIG--YLA 97
Query: 80 IIDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQ 138
+ +G ++I++ N +R +L P++Y GV L L ++ L ++
Sbjct: 98 A-SQCFHEGT---DVIMLTTNQIRKDLSSPSQYDTGVALTGLSCFVTPDLARDLANDIMT 153
Query: 139 NLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLFTC 198
+ H PYIR+ A+L + ++ L E L P + EK+ + DP + A ++
Sbjct: 154 LMSHTKPYIRKKAVLIMYKVF-LKYPESLRPAFPRLKEKL--EDPDPGVQSAAVNVICEL 210
Query: 199 DQDRAINYL----LTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXXXXXSLLNAP 254
+ NYL L S + + +++L + +L+++
Sbjct: 211 ARRNPKNYLSLAPLFFKLMTSSTNNWVLIKIIKLFGALTPLEPRLGKKLIEPLTNLIHST 270
Query: 255 ST-AVIYECAGT----LVSLSSAPTAIRAAANTYSQ---LLLSQSDNNVKLIVLDRLNEL 306
S +++YEC T L+SLSS A+ Q +L+ SD N+K + L ++++
Sbjct: 271 SAMSLLYECVNTVIAVLISLSSGMPNHSASIQLCVQKLRILIEDSDQNLKYLGLLAMSKI 330
Query: 307 RSSHRDIMVDLIMD-VLRALNSPNLDIRRKTLDIVLELITPRNI 349
+H V D VL+ L+ + IR + LD++ +++ +N+
Sbjct: 331 LRTHPK-SVQAHKDLVLQCLDDKDESIRLRALDLLYGMVSKKNL 373
>MGI|MGI:107734 [details] [associations]
symbol:Ap3d1 "adaptor-related protein complex 3, delta 1
subunit" species:10090 "Mus musculus" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005802 "trans-Golgi network" evidence=TAS] [GO:0006810
"transport" evidence=IEA] [GO:0006829 "zinc ion transport"
evidence=TAS] [GO:0006886 "intracellular protein transport"
evidence=IMP;TAS] [GO:0008089 "anterograde axon cargo transport"
evidence=IMP] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0010008 "endosome membrane" evidence=ISO;IDA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=TAS] [GO:0019882 "antigen processing and presentation"
evidence=IMP] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030424
"axon" evidence=IDA] [GO:0033365 "protein localization to
organelle" evidence=IMP] [GO:0043195 "terminal bouton"
evidence=IDA] [GO:0048007 "antigen processing and presentation,
exogenous lipid antigen via MHC class Ib" evidence=IMP] [GO:0048490
"anterograde synaptic vesicle transport" evidence=IMP] [GO:0048499
"synaptic vesicle membrane organization" evidence=IMP] [GO:0051138
"positive regulation of NK T cell differentiation" evidence=IMP]
[GO:0061088 "regulation of sequestering of zinc ion"
evidence=ISO;TAS] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR017105 Pfam:PF01602 PIRSF:PIRSF037092 MGI:MGI:107734
GO:GO:0006886 GO:GO:0000139 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 PROSITE:PS50077 GO:GO:0030117 GO:GO:0008565
GO:GO:0043195 GO:GO:0010008 GO:GO:0008089 GO:GO:0005802
GO:GO:0033365 eggNOG:COG5096 GO:GO:0048490 GO:GO:0048007
GO:GO:0051138 GO:GO:0006829 CTD:8943 GeneTree:ENSGT00550000075067
HOGENOM:HOG000000981 KO:K12396 OMA:VCKLTYL OrthoDB:EOG45TCMD
GO:GO:0061088 GO:GO:0048499 InterPro:IPR010474 Pfam:PF06375
HOVERGEN:HBG050520 ChiTaRS:AP3D1 EMBL:AB004305 EMBL:BC048786
EMBL:BC053066 IPI:IPI00117811 PIR:T13946 RefSeq:NP_031486.1
UniGene:Mm.209294 ProteinModelPortal:O54774 SMR:O54774
DIP:DIP-32163N IntAct:O54774 STRING:O54774 PhosphoSite:O54774
PaxDb:O54774 PRIDE:O54774 Ensembl:ENSMUST00000020420 GeneID:11776
KEGG:mmu:11776 UCSC:uc007gek.1 InParanoid:O54774 NextBio:279571
Bgee:O54774 Genevestigator:O54774 GermOnline:ENSMUSG00000020198
Uniprot:O54774
Length = 1199
Score = 179 (68.1 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 77/344 (22%), Positives = 156/344 (45%)
Query: 20 NEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLE 79
+EIK+ L+ +++ K +A+ K L + G + I+ V+ + T +++ YL
Sbjct: 41 DEIKQELKQDNIAVKANAVCKLTYLQMLGYDISWAAFNIIE-VMSASKFTFKRVG--YLA 97
Query: 80 IIDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQ 138
+ +G ++I++ N +R +L P++Y GV L L ++ L ++
Sbjct: 98 A-SQCFHEGT---DVIMLTTNQIRKDLSSPSQYDTGVALTGLSCFVTPDLARDLANDIMT 153
Query: 139 NLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLFTC 198
+ H PYIR+ A+L + ++ L E L P + EK+ + DP + A ++
Sbjct: 154 LMSHTKPYIRKKAVLIMYKVF-LKYPESLRPAFPRLKEKL--EDPDPGVQSAAVNVICEL 210
Query: 199 DQDRAINYL----LTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXXXXXSLLNAP 254
+ NYL L S + + +++L + +L+++
Sbjct: 211 ARRNPKNYLSLAPLFFKLMTSSTNNWVLIKIIKLFGALTPLEPRLGKKLIEPLTNLIHST 270
Query: 255 ST-AVIYECAGT----LVSLSSAPTAIRAAANTYSQ---LLLSQSDNNVKLIVLDRLNEL 306
S +++YEC T L+SLSS A+ Q +L+ SD N+K + L ++++
Sbjct: 271 SAMSLLYECVNTVIAVLISLSSGMPNHSASIQLCVQKLRILIEDSDQNLKYLGLLAMSKI 330
Query: 307 RSSHRDIMVDLIMD-VLRALNSPNLDIRRKTLDIVLELITPRNI 349
+H V D +L+ L+ + IR + LD++ +++ +N+
Sbjct: 331 LKTHPK-SVQSHKDLILQCLDDKDESIRLRALDLLYGMVSKKNL 373
>FB|FBgn0001087 [details] [associations]
symbol:g "garnet" species:7227 "Drosophila melanogaster"
[GO:0006726 "eye pigment biosynthetic process"
evidence=IEP;IMP;IDA] [GO:0006727 "ommochrome biosynthetic process"
evidence=IMP] [GO:0008055 "ocellus pigment biosynthetic process"
evidence=IDA] [GO:0008057 "eye pigment granule organization"
evidence=IMP] [GO:0030131 "clathrin adaptor complex" evidence=ISS]
[GO:0030123 "AP-3 adaptor complex" evidence=NAS] [GO:0005798
"Golgi-associated vesicle" evidence=NAS] [GO:0006895 "Golgi to
endosome transport" evidence=NAS] [GO:0007041 "lysosomal transport"
evidence=TAS] [GO:0007040 "lysosome organization" evidence=ISS]
[GO:0005795 "Golgi stack" evidence=IDA] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] [GO:0046907 "intracellular transport"
evidence=TAS] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0048072 "compound eye pigmentation" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0007220 "Notch receptor processing" evidence=IMP] [GO:0006897
"endocytosis" evidence=IMP] [GO:0005770 "late endosome"
evidence=IDA] [GO:0060967 "negative regulation of gene silencing by
RNA" evidence=IMP] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR017105 Pfam:PF01602 PIRSF:PIRSF037092 GO:GO:0005783
GO:GO:0008340 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 PROSITE:PS50077 GO:GO:0008565 EMBL:AE014298
GO:GO:0005795 GO:GO:0006897 GO:GO:0007040 GO:GO:0005770
GO:GO:0005798 GO:GO:0007220 eggNOG:COG5096 GO:GO:0030665
GO:GO:0006895 GO:GO:0007041 GO:GO:0030123 KO:K12396
InterPro:IPR010474 Pfam:PF06375 EMBL:AF002164 EMBL:AF044287
EMBL:U31351 RefSeq:NP_524785.2 ProteinModelPortal:P54362 SMR:P54362
IntAct:P54362 MINT:MINT-948300 STRING:P54362 PaxDb:P54362
GeneID:44819 KEGG:dme:Dmel_CG10986 UCSC:CG10986-RB CTD:44819
FlyBase:FBgn0001087 InParanoid:P54362 OrthoDB:EOG4RJDGF ChiTaRS:g
GenomeRNAi:44819 NextBio:837685 Bgee:P54362 GermOnline:CG10986
GO:GO:0048072 GO:GO:0008057 GO:GO:0060967 GO:GO:0006727
Uniprot:P54362
Length = 1034
Score = 186 (70.5 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 94/468 (20%), Positives = 194/468 (41%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
EIK+ L +++ K +A+ K + + G + I+ V+ S T +++ L
Sbjct: 43 EIKQELRQDNISVKCNAVAKLTYIQMLGYDISWAGFNIIE-VMSSSRFTCKRIGYLAASQ 101
Query: 81 IDKTDAKGRVLPEMILICQNL-RNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
D+ E++++ N+ R +L N+Y GV L L ++ L ++
Sbjct: 102 CFHPDS------ELLMLTTNMIRKDLNSQNQYDAGVALSGLSCFISPDLSRDLANDIMTL 155
Query: 140 LQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLFTCD 199
+ PY+R A+L + ++ L E L P++ EK+ + DP + A ++
Sbjct: 156 MSSTKPYLRMKAVLMMYKVF-LRYPEALRPAFPKLKEKL--EDPDPGVQSAAVNVICELA 212
Query: 200 QDRAINYL-LTHVD---RVSEWGELLQMVVLELIRKVCRTNXXXXXXXXXXXXSLLNAPS 255
+ NYL L + + + + +++L + +L+++ S
Sbjct: 213 RKNPKNYLPLAPIFFKLMTTSTNNWMLIKIIKLFGALTPLEPRLGKKLIEPLTNLIHSTS 272
Query: 256 T-AVIYECAGT----LVSLSSAPTAIRAAANTYSQ---LLLSQSDNNVKLIVLDRLNELR 307
+++YEC T L+S+SS A+ Q +L+ SD N+K + L ++++
Sbjct: 273 AMSLLYECINTVIAVLISISSGMPNHSASIQLCVQKLRILIEDSDQNLKYLGLLAMSKIL 332
Query: 308 SSHRDIMVDLIMD-VLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQSG 366
+H V D +L L+ + IR + LD++ +++ +N+ +
Sbjct: 333 KTHPK-SVQAHKDLILACLDDKDESIRLRALDLLYGMVSKKNLMEIVKRLLGHMERAEGS 391
Query: 367 ELEKNGEYR--QMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVREIIE 424
Y+ ++ Q+ + F + +V L+ G + + ++ V +
Sbjct: 392 AYRDELLYKVIEICAQSSYLYVTNFEWYLTVLVELIQLEAGSRHGRLIAEQLLDVAIRVP 451
Query: 425 MNPKLRVSIITRLLDNFY---QIRAA-RVCTCALWIIGEYCQSLSEVE 468
+ + V+ +T LLD F Q + V A WI+GE+ L + E
Sbjct: 452 VVRQFAVNEMTNLLDTFTVSAQSNSMYEVLYAAAWIVGEFAGELEDAE 499
Score = 42 (19.8 bits), Expect = 7.6e-09, Sum P(3) = 7.6e-09
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 703 GEFVKEGDDANK-LNRILQ---LTGFSDPVYAE 731
GEF E +DA K LN +L+ L G VY +
Sbjct: 489 GEFAGELEDAEKTLNILLRPRLLPGHIQGVYVQ 521
Score = 41 (19.5 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 678 HLKSRKGMSQLELEDEVQDDLKRATGEFVKE--GDDANKL 715
H K +K + DE D L ATG + + G++A+++
Sbjct: 946 HHKKKKNKEKTT--DEAPDALATATGSSIIDVGGEEASEV 983
Score = 39 (18.8 bits), Expect = 7.6e-09, Sum P(3) = 7.6e-09
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 822 DIHIDIMDYISPAV 835
DI +DI ++ +PAV
Sbjct: 836 DIELDITEFEAPAV 849
>UNIPROTKB|E1C262 [details] [associations]
symbol:AP3D1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008089 "anterograde axon cargo transport"
evidence=IEA] [GO:0010008 "endosome membrane" evidence=IEA]
[GO:0033365 "protein localization to organelle" evidence=IEA]
[GO:0043195 "terminal bouton" evidence=IEA] [GO:0048007 "antigen
processing and presentation, exogenous lipid antigen via MHC class
Ib" evidence=IEA] [GO:0048490 "anterograde synaptic vesicle
transport" evidence=IEA] [GO:0048499 "synaptic vesicle membrane
organization" evidence=IEA] [GO:0051138 "positive regulation of NK
T cell differentiation" evidence=IEA] [GO:0061088 "regulation of
sequestering of zinc ion" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR017105 Pfam:PF01602
PIRSF:PIRSF037092 GO:GO:0005794 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0030117 GO:GO:0016192
GO:GO:0008565 GO:GO:0010008 GO:GO:0033365 GO:GO:0048007
GO:GO:0051138 GeneTree:ENSGT00550000075067 OMA:VCKLTYL
GO:GO:0061088 GO:GO:0048499 InterPro:IPR010474 Pfam:PF06375
EMBL:AADN02066738 IPI:IPI00573196 Ensembl:ENSGALT00000001472
ArrayExpress:E1C262 Uniprot:E1C262
Length = 1208
Score = 187 (70.9 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 109/484 (22%), Positives = 206/484 (42%)
Query: 20 NEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLE 79
+EIK+ L+ +++ K +A+ K L + G + I+ V+ + T +++ YL
Sbjct: 41 DEIKQELKQDNIAVKANAVCKLTYLQMLGYDISWAAFNIIE-VMSASKFTFKRIG--YLA 97
Query: 80 IIDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQ 138
+ +G ++I++ N +R +L PN+Y GV L L ++ L ++
Sbjct: 98 A-SQCFHEGT---DVIMLTTNQIRKDLSSPNQYDTGVALTGLSCFVTPDLARDLANDIMT 153
Query: 139 NLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLFTC 198
+ H PYIR+ A+L + ++ L E L P + EK+ + DP + A ++
Sbjct: 154 LMSHTKPYIRKKAVLIMYKVF-LKYPESLRPAFPRLKEKL--EDPDPGVQSAAVNVICEL 210
Query: 199 DQDRAINYL----LTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXXXXXSLLNAP 254
+ NYL L S + + +++L + +L+++
Sbjct: 211 ARRNPKNYLSLAPLFFKLMTSSTNNWVLIKIIKLFGALTPLEPRLGKKLIEPLTNLIHST 270
Query: 255 ST-AVIYECAGT----LVSLSSAPTAIRAAANTYSQ---LLLSQSDNNVKLIVLDRLNEL 306
S +++YEC T L+SLSS A+ Q +L+ SD N+K + L ++++
Sbjct: 271 SAMSLLYECVNTVIAVLISLSSGMPNHSASIQLCVQKLRILIEDSDQNLKYLGLLAMSKI 330
Query: 307 RSSHRDIMVDLIMD-VLRALNSPNLDIRRKTLDIVLELITPRN----INXXXXXXXXXXX 361
+H V D +L+ L+ + IR + LD++ +++ +N +
Sbjct: 331 LKTHPK-SVQSHKDLILQCLDDKDESIRLRALDLLYGMVSKKNLMEIVKKLMIHVDKAEG 389
Query: 362 XTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLL-MDFLGDSNVASA--IDVIIF 418
T EL + + Q+ + F S +V L ++ ++ +A +DV I
Sbjct: 390 TTYRDELLT--KIIDICSQSNYQYITNFEWYISILVELTRLEGTRHGHLIAAQMLDVAIR 447
Query: 419 VREIIEMNPKLRVSIITRLLDNFYQIRA--ARVCTC-ALWIIGEYCQSLSE-VENGIATI 474
V+ I K VS + LLDN + I + R C L+ C SE +E T+
Sbjct: 448 VKAI----RKFAVSQMAMLLDNAHLIASNTQRNGICEVLYAAAWICGEFSEHLEEANQTL 503
Query: 475 KQCL 478
+ L
Sbjct: 504 EAML 507
Score = 40 (19.1 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 650 EKQLRESEELKAKAQISHAQPDDLIDFY 677
EK+ +E E+ K K + + +DL DF+
Sbjct: 848 EKKHKEKEKDKGKKKEKEKKEEDL-DFW 874
>ZFIN|ZDB-GENE-050208-437 [details] [associations]
symbol:ap3d1 "adaptor-related protein complex 3,
delta 1 subunit" species:7955 "Danio rerio" [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] InterPro:IPR002553 InterPro:IPR016024
Pfam:PF01602 ZFIN:ZDB-GENE-050208-437 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0030117 GO:GO:0016192
eggNOG:COG5096 CTD:8943 GeneTree:ENSGT00550000075067
HOGENOM:HOG000000981 KO:K12396 OMA:VCKLTYL OrthoDB:EOG45TCMD
InterPro:IPR010474 Pfam:PF06375 HOVERGEN:HBG050520 EMBL:BX005201
EMBL:BC171356 IPI:IPI00864428 RefSeq:NP_001038480.1
UniGene:Dr.74054 Ensembl:ENSDART00000105580 GeneID:563359
KEGG:dre:563359 Uniprot:B7ZUU8
Length = 1247
Score = 187 (70.9 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 80/344 (23%), Positives = 156/344 (45%)
Query: 20 NEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLE 79
+EIK+ L+ +++ K +A+ K L + G + IV V+ S T +++ YL
Sbjct: 41 DEIKQELKQDNIAVKANAVCKLTYLQMLGYDVSWAAFNIVE-VMSSSKFTYKRIG--YLA 97
Query: 80 IIDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQ 138
+ +G ++I++ N +R +L PN+Y GV L L ++ L ++
Sbjct: 98 A-SQCFHEGT---DVIMLTTNQIRKDLSSPNQYDTGVALTGLSCFVTPDLARDLANDIMT 153
Query: 139 NLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLFTC 198
+ H PYIR+ A+L + ++ L E L P + EK+ + DP + A ++
Sbjct: 154 LMSHTKPYIRKKAVLIMYKVF-LKYPESLRPAFPRLKEKL--EDPDPGVQSAAVNVICEL 210
Query: 199 DQDRAINYL----LTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXXXXXSLLNAP 254
+ NYL L S + + +++L + +L+++
Sbjct: 211 ARRNPKNYLSLAPLFFKLMTSSTNNWVLIKIIKLFGALTPLEPRLGKKLIEPLTNLIHST 270
Query: 255 ST-AVIYECAGT----LVSLSSAPTAIRAAANTYSQ---LLLSQSDNNVKLIVLDRLNEL 306
S +++YEC T L+SLSS A+ Q +L+ SD N+K + L ++++
Sbjct: 271 SAMSLLYECVNTVIAVLISLSSGMPNHSASIQLCVQKLRILIEDSDQNLKYLGLLAMSKI 330
Query: 307 RSSHRDIMVDLIMD-VLRALNSPNLDIRRKTLDIVLELITPRNI 349
+H V D +L+ L+ + IR + LD++ +++ +N+
Sbjct: 331 LKTHPK-SVQSHKDLILQCLDDKDESIRLRALDLLYGMVSKKNL 373
Score = 39 (18.8 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 9/22 (40%), Positives = 10/22 (45%)
Query: 723 GFSDPVYAEAYVTVHHYDIVLD 744
G S P E HH DIV +
Sbjct: 756 GDSGPESEEDITPAHHVDIVTE 777
>WB|WBGene00000163 [details] [associations]
symbol:apb-3 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030123 "AP-3 adaptor complex"
evidence=IEA] [GO:0019915 "lipid storage" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching"
evidence=IGI;IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0007040 "lysosome organization"
evidence=IMP] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR026739 InterPro:IPR026740 Pfam:PF01602
PIRSF:PIRSF037096 GO:GO:0009792 GO:GO:0040007 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0002119
GO:GO:0016192 GO:GO:0010171 GO:GO:0007040 GO:GO:0019915
eggNOG:COG5096 PANTHER:PTHR11134 GeneTree:ENSGT00530000063546
GO:GO:0030123 PANTHER:PTHR11134:SF1 OMA:RVPVISQ EMBL:Z83122
RefSeq:NP_492170.2 ProteinModelPortal:O45718 SMR:O45718
PaxDb:O45718 PRIDE:O45718 EnsemblMetazoa:R11A5.1a.1
EnsemblMetazoa:R11A5.1a.2 GeneID:172553 KEGG:cel:CELE_R11A5.1
UCSC:R11A5.1b CTD:172553 WormBase:R11A5.1a ArrayExpress:O45718
Uniprot:O45718
Length = 945
Score = 153 (58.9 bits), Expect = 8.0e-09, Sum P(3) = 8.0e-09
Identities = 42/156 (26%), Positives = 82/156 (52%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
++K L+ N KVDAMK+ I L+ G+ + +LF +V+ V +++ ++KL+ +YL
Sbjct: 30 DLKAMLDSNKDNLKVDAMKRIINLIAKGKDVSELFAAVVKNVA-AKNVELKKLVFVYL-- 86
Query: 81 IDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNL 140
+ + + + +L + L+ PN+ IRG LR L + + ++ ++ +
Sbjct: 87 VRYAEEQQDLA---LLSISTFQRALKDPNQLIRGSALRVLTSIRVPMVAPIMLLAIKDAV 143
Query: 141 QHRHPYIRRNAILAVMAIYKL-PQGEQLLVDAPEMI 175
+ PY+R+ A A+ +Y L P+ E LVD + +
Sbjct: 144 RDMSPYVRKVAAHAIPKLYSLEPELEPQLVDCIDFL 179
Score = 76 (31.8 bits), Expect = 8.0e-09, Sum P(3) = 8.0e-09
Identities = 16/87 (18%), Positives = 42/87 (48%)
Query: 379 IQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVREIIEMNPKLRV-SIITRL 437
++AI CA++ V+ + L+ + S+ ++ ++ ++ + L + S + RL
Sbjct: 388 VEAIGRCAVRVGAVSDQCMTGLVQLISSSDEKVVCSAVVVIKRLLHASAPLNLLSRLMRL 447
Query: 438 LDNFYQIRAARVCTCALWIIGEYCQSL 464
+ N AA+ C +W++ + + +
Sbjct: 448 MPNMI---AAQARACVIWLVATHVEQV 471
Score = 38 (18.4 bits), Expect = 8.0e-09, Sum P(3) = 8.0e-09
Identities = 19/105 (18%), Positives = 46/105 (43%)
Query: 613 DSFDRIVVCIRLLCNT---GDNIRKIWLQSCRQSFVKMLSEKQLRESEELKAKAQISHAQ 669
D DR L+ NT ++ +I++ ++ +++S + R+ +L + + + + +
Sbjct: 530 DVRDRCRFLRNLMFNTEILSQHMEEIFMS--KKPAPELISSFKERDKFQLGSLSHVLNQR 587
Query: 670 PDDLIDFYHLKSRKGMSQLELEDEVQDDLKRATGEFVKEGDDANK 714
ID + S L E ++LK + ++ DD ++
Sbjct: 588 CTKYIDLPEFPATSSDSLLRKEAHAPNELKLDDSDEEEDDDDEDE 632
>UNIPROTKB|G4N974 [details] [associations]
symbol:MGG_03320 "AP-1 complex subunit beta-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602
PIRSF:PIRSF002291 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0030117 GO:GO:0016192 GO:GO:0008565
GO:GO:0043581 PANTHER:PTHR11134 EMBL:CM001234 RefSeq:XP_003716637.1
ProteinModelPortal:G4N974 SMR:G4N974 EnsemblFungi:MGG_03320T0
GeneID:2676863 KEGG:mgr:MGG_03320 Uniprot:G4N974
Length = 738
Score = 168 (64.2 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 82/469 (17%), Positives = 195/469 (41%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
E++ L + +A++K IM + G+ + LF +++ + + D +KL+ LYL
Sbjct: 21 ELRAGLVSQYAYERKEAIQKTIMAMTLGKDVSALFPDVLKNIATA-DLDQKKLVYLYL-- 77
Query: 81 IDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
AK P++ ++ N + + PN IR + +R + + ++++ + + +
Sbjct: 78 --MNYAKSH--PDLCILAVNTFVQDSEDPNPLIRALAIRTMGCIRVDKMVDYMEEPLRKT 133
Query: 140 LQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLF--- 196
L+ PY+R+ A + V ++ L + E +++++ + +P N+ L
Sbjct: 134 LRDESPYVRKTAAICVAKLFDLNPTMCIENGFLETLQELIG-DPNPMVVANSVQALSEIA 192
Query: 197 -TCDQDRAI-------NYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXXXXX 248
T + RA+ LL ++ +EWG ++ +L + ++
Sbjct: 193 ETAPETRALVITPATLKKLLMALNECTEWG---RVTILSTLADYPPSDVKESEHVCERVA 249
Query: 249 SLLNAPSTAVIYECAGTL-VSLSSA-PTAIRAAANTYSQLLLS--QSDNNVKLIVLDRLN 304
+ +V+ + + + P ++R + L++ S V+ + L ++
Sbjct: 250 PQFQHVNPSVVLAAVKVVFIHMKVINPDSVRQYLKKMAPPLVTLVASAPEVQYVALRNID 309
Query: 305 ELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQ 364
L + DI+ + N P ++ + L+I++ + +N
Sbjct: 310 LLLQAKPDILSKELRVFFCKYNDPPY-VKMQKLEIMVRIANDKNFEQLLAELKEYA---- 364
Query: 365 SGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVREIIE 424
LE + ++ + ++AI AIK + V+ L+D + +V++ +++I+
Sbjct: 365 ---LEVDMDFVRRAVKAIGQVAIKIESASEKCVNALLDLMATKVNYVVQEVVVVIKDILR 421
Query: 425 MNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIAT 473
P +I L ++ ++ +WI+GEY + +S + I+T
Sbjct: 422 KYPGYE-GVIPTLCEHIDELDEPNARGSLIWIVGEYAEKISNADEIIST 469
>DICTYBASE|DDB_G0281957 [details] [associations]
symbol:ap1g1 "gamma adaptin" species:44689
"Dictyostelium discoideum" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030276 "clathrin binding" evidence=IPI]
[GO:0030130 "clathrin coat of trans-Golgi network vesicle"
evidence=IDA] [GO:0030121 "AP-1 adaptor complex" evidence=IDA]
[GO:0006895 "Golgi to endosome transport" evidence=IDA] [GO:0044431
"Golgi apparatus part" evidence=IEA] [GO:0030131 "clathrin adaptor
complex" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0008565 "protein transporter
activity" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006897 "endocytosis"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0030665
"clathrin-coated vesicle membrane" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR016024 InterPro:IPR017107
Pfam:PF01602 Pfam:PF02883 PIRSF:PIRSF037094 SMART:SM00809
InterPro:IPR013041 InterPro:IPR008153 dictyBase:DDB_G0281957
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GenomeReviews:CM000152_GR GO:GO:0008565
GO:GO:0006897 GO:GO:0030121 SUPFAM:SSF49348 HSSP:P22892
eggNOG:NOG303101 KO:K12391 Gene3D:2.60.40.1230
PANTHER:PTHR22780:SF5 PROSITE:PS50180 EMBL:AY144597
EMBL:AAFI02000044 RefSeq:XP_640382.1 ProteinModelPortal:Q8I8U2
SMR:Q8I8U2 STRING:Q8I8U2 EnsemblProtists:DDB0214928 GeneID:8623337
KEGG:ddi:DDB_G0281957 OMA:NTECAYI GO:GO:0006895 Uniprot:Q8I8U2
Length = 895
Score = 118 (46.6 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 37/151 (24%), Positives = 73/151 (48%)
Query: 206 YLLTH-VDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXXXXXSL-LNAPST-----AV 258
YL H + V++ LQ+ +L L+R + + + + N ST A+
Sbjct: 229 YLPEHDIGGVTD--PFLQVKILRLLRILGQNDPEASDAMNDILAQVSTNTDSTKNVGNAI 286
Query: 259 IYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLDRLNELRSSHRDIMVDLI 318
+YEC T++++ S A N + LL++ DNN++ + L+ L+ + ++ +
Sbjct: 287 LYECVQTIMTIESENGLKVMAINILGRFLLNR-DNNIRYVALNTLSRVVNTDIQAVQRHR 345
Query: 319 MDVLRALNSPNLDIRRKTLDIVLELITPRNI 349
++ L P++ IR + LD++ L+T NI
Sbjct: 346 NTIVECLKDPDVSIRCRALDLIYSLVTESNI 376
Score = 105 (42.0 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 29/112 (25%), Positives = 61/112 (54%)
Query: 93 EMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNLQHRHPYIRRNA 151
E++L+ N +R ++ + N++I GV+L + T + + P + + + H +PYIR+ A
Sbjct: 96 EVLLLATNCIRGDIMNSNQFIVGVSLCAFGNICSTAMARDISPEIEKVISHSNPYIRKKA 155
Query: 152 IL-AVMAIYKLPQGEQLLVDAPEMIEKVLSTEQDPSAKRNAF-LMLFTCDQD 201
L A+ + K+P + + P++ K L +E++ + A L++ C+ D
Sbjct: 156 ALCAIRVLRKVPDLTENYI--PKI--KALLSERNHAVILTALTLIIEICEMD 203
Score = 42 (19.8 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 584 NKASSQALLIMVSMLQLGQSPVLP 607
NK+ + ALL ++ LQL +P P
Sbjct: 731 NKSQASALLDIMGDLQLTPTPQQP 754
Score = 40 (19.1 bits), Expect = 2.5e-08, Sum P(3) = 2.5e-08
Identities = 11/25 (44%), Positives = 13/25 (52%)
Query: 762 LATMGDLKLVERPQNYTLAPESSKQ 786
L MGDL+L PQ P+S Q
Sbjct: 739 LDIMGDLQLTPTPQQ----PQSQSQ 759
>SGD|S000001618 [details] [associations]
symbol:APL2 "Beta-adaptin subunit of the clathrin-associated
protein (AP-1) complex" species:4932 "Saccharomyces cerevisiae"
[GO:0016192 "vesicle-mediated transport" evidence=IEA;ISS;IPI]
[GO:0030276 "clathrin binding" evidence=ISS;IPI] [GO:0030121 "AP-1
adaptor complex" evidence=ISS;IPI] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0008565 "protein transporter
activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0006896
"Golgi to vacuole transport" evidence=IMP] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005905 "coated pit" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 PIRSF:PIRSF002291 SGD:S000001618 GO:GO:0005886
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0008565 GO:GO:0005905 EMBL:BK006944 GO:GO:0030121
GO:GO:0030276 eggNOG:COG5096 HOGENOM:HOG000163270 PANTHER:PTHR11134
GeneTree:ENSGT00530000063138 OrthoDB:EOG49GPQW EMBL:Z30212
EMBL:Z28135 PIR:S37964 RefSeq:NP_012787.1 ProteinModelPortal:P36000
SMR:P36000 DIP:DIP-1199N IntAct:P36000 MINT:MINT-404361
STRING:P36000 PaxDb:P36000 PeptideAtlas:P36000 PRIDE:P36000
EnsemblFungi:YKL135C GeneID:853723 KEGG:sce:YKL135C CYGD:YKL135c
OMA:YDISATM NextBio:974749 Genevestigator:P36000 GermOnline:YKL135C
GO:GO:0006896 Uniprot:P36000
Length = 726
Score = 170 (64.9 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 84/478 (17%), Positives = 209/478 (43%)
Query: 20 NEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLE 79
+E++ L + DA+KK I + G+ + LF +++ + + +++ L+YL
Sbjct: 29 SELRTGLVSQYPQTRKDAIKKTIQQMTLGKDVSSLFPDVLKNIATID---VEQKKLVYLY 85
Query: 80 IIDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQ 138
+++ + PE+ ++ N + Q PN IR + +R + + +I+E + + +
Sbjct: 86 VMNYAETH----PELCILAVNTFITDAQDPNPLIRCMAIRTMSMIRVDKILEYIETPLRR 141
Query: 139 NLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLSTEQD--PSAKRNA---FL 193
L + Y+R+ A++ V +++L + L V+ ++E +++ D P NA +
Sbjct: 142 TLHDDNAYVRKTAVICVAKLFQL--NKDLCVELG-VVEDLVNALDDSNPLVIANATAALI 198
Query: 194 MLFTCDQDRA-INYLL-THVDR----VSEWGELLQMVVLELIRKVCRTNXXXXXXXXXXX 247
+ D D ++ L+ +HV + ++E E ++++L + + +
Sbjct: 199 EIHNMDMDAVDLSSLIQSHVSQFLLALNECTEWARIIILGTLSEYSAKDSLEAQDIIDRV 258
Query: 248 XSLLNAPSTAVIYECAGTLV------SLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLD 301
+ L + AV+ +V SS ++ ++ + L+ + + ++ + L
Sbjct: 259 TAHLQHVNPAVVLATIKVIVRNLPQIEYSSNSLIMKRLSSAFVSLMSTPPE--MQYVALK 316
Query: 302 RLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXX 361
+ + + +++ + N P L ++ + +DI++ L+ P N+
Sbjct: 317 NIRIILEKYPELLTKELRIFYVKFNDP-LYVKLEKIDILVRLVDPSNLKQCTLLLTELKE 375
Query: 362 XTQSGELEKNGEYRQMLIQAIHSCAIKFPEVA--STVVHLLMDFLGDSNVASAIDVIIFV 419
+E E+ IQA+ IK+ + + S V+ +L++ L + D I +
Sbjct: 376 YA----MEYEPEFVSRAIQALSQLGIKYAQESFVSKVLDILLELLERQDTIKD-DCCISL 430
Query: 420 REIIEM---NPKL--RVSIITRLLDNFYQIRAARVCTCA-LWIIGEYCQSLSEVENGI 471
+++ N K+ +V + N + + + C +W++G++ + S++E+ I
Sbjct: 431 CDLLRHCPGNDKMAKQVCAVFNTWSNPEVLLQSDIAKCNYVWLLGQHPNNFSDLESKI 488
Score = 41 (19.5 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 651 KQLRESEELKAKAQISHAQPDD-LIDF 676
K + E E + AK +IS DD L+DF
Sbjct: 616 KHIEELESM-AKNEISSKANDDVLLDF 641
>ASPGD|ASPL0000034670 [details] [associations]
symbol:AN3029 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602
PIRSF:PIRSF002291 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0030117 GO:GO:0016192 GO:GO:0008565
EMBL:BN001306 EMBL:AACD01000051 eggNOG:COG5096 HOGENOM:HOG000163270
PANTHER:PTHR11134 OMA:KECENAD OrthoDB:EOG49GPQW RefSeq:XP_660633.1
ProteinModelPortal:Q5B8V1 SMR:Q5B8V1 STRING:Q5B8V1
EnsemblFungi:CADANIAT00010050 GeneID:2873851 KEGG:ani:AN3029.2
Uniprot:Q5B8V1
Length = 766
Score = 167 (63.8 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 91/469 (19%), Positives = 190/469 (40%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
E++ L + +A++K IM + G+ + LF +++ + S D +KL+ LYL
Sbjct: 20 ELRAGLVSQYAYERKEAIQKTIMAMTLGKDVSALFPDVLKNIATS-DLEQKKLVYLYL-- 76
Query: 81 IDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
AK P++ ++ N + + PN IR + +R + + ++I+ + + +
Sbjct: 77 --MNYAKSH--PDLCILAVNTFVQDSEDPNPLIRALAIRTMGCIRVDKMIDYMEEPLRKT 132
Query: 140 LQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLML---- 195
L+ PY+R+ A + V ++ L L EM+++++ + +P N+ L
Sbjct: 133 LRDESPYVRKTAAICVAKLFDLGPAMCLENGFLEMLQEMIG-DPNPMVVANSVTALSEIH 191
Query: 196 FTCDQDRAINY-------LLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXXXXX 248
+ +A+ LL ++ +EWG + + L R
Sbjct: 192 HAAPETQALQVTPNTLRKLLMALNECTEWGRVTILTTLSEYRTSAVNEAEQICERVAPQF 251
Query: 249 SLLNAPSTAVIYECAGTL---VSLSSAPTAIRAAANTYSQLL-LSQSDNNVKLIVLDRLN 304
N PS V+ T+ + + +A + L+ L S V+ + L ++
Sbjct: 252 QHAN-PS--VVLAAVKTVFLHMKIINAELSKNYLKKMAPPLVTLVSSAPEVQYVALRNID 308
Query: 305 ELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQ 364
L DI+ + N P ++ + L+I++ + RN +
Sbjct: 309 LLLQKQPDILNKELRVFFCKYNDPPY-VKFQKLEIMVRIANDRNFDQLLAELREYA---- 363
Query: 365 SGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAI-DVIIFVREII 423
LE + ++ + ++AI AIK V+ L+D + ++ V + + I+ +++I
Sbjct: 364 ---LEVDMDFVRRAVKAIGQVAIKIESACEKCVNTLLDLI-NTKVNYVVQEAIVVIKDIF 419
Query: 424 EMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIA 472
P II L ++ +WI+GEY + +S + +A
Sbjct: 420 RKYPGYE-GIIPTLCKCIDELDEPNARAALIWIVGEYAEKISNAGDILA 467
Score = 44 (20.5 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 24/71 (33%), Positives = 29/71 (40%)
Query: 611 DN-DSFDRIVVCIRLLCNTGDN--IRKIWLQSCRQSFVKMLSE--KQLRES--EELKAKA 663
DN D DR V RLL NT D R I L S + V + L E EL A
Sbjct: 534 DNPDVRDRAYVYWRLLSNTSDPDAARNIVL-SKKPPIVTTIHSLPPALLEQLLTELSTLA 592
Query: 664 QISHAQPDDLI 674
+ H P+ +
Sbjct: 593 SVYHMPPEQFV 603
>GENEDB_PFALCIPARUM|PF14_0529 [details] [associations]
symbol:PF14_0529 "gamma-adaptin, putative"
species:5833 "Plasmodium falciparum" [GO:0005802 "trans-Golgi
network" evidence=ISS] [GO:0030131 "clathrin adaptor complex"
evidence=ISS] InterPro:IPR002553 InterPro:IPR008152
InterPro:IPR016024 InterPro:IPR017107 Pfam:PF01602 Pfam:PF02883
SMART:SM00809 InterPro:IPR013041 InterPro:IPR008153 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 EMBL:AE014187 GO:GO:0005802 GO:GO:0030131
SUPFAM:SSF49348 HSSP:P22892 HOGENOM:HOG000210271 KO:K12391
Gene3D:2.60.40.1230 PANTHER:PTHR22780:SF5 PROSITE:PS50180
GO:GO:0044431 RefSeq:XP_001348703.1 ProteinModelPortal:Q8IKS3
IntAct:Q8IKS3 MINT:MINT-1570028 EnsemblProtists:PF14_0529:mRNA
GeneID:812111 KEGG:pfa:PF14_0529 EuPathDB:PlasmoDB:PF3D7_1455500
OMA:SNQYING ProtClustDB:CLSZ2432934 Uniprot:Q8IKS3
Length = 1081
Score = 120 (47.3 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 47/223 (21%), Positives = 91/223 (40%)
Query: 249 SLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLDRLNELRS 308
SL N A++YEC T+ +S+ P + A N + L +DNN++ + L L +L
Sbjct: 379 SLKNV-GNAILYECVKTITYISTDPGLLVLAVNVLGKFL-QNNDNNIRYVGLCTLQKLLK 436
Query: 309 SHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQSGEL 368
+ ++ L ++ IR+K LD+ LIT ++ ++
Sbjct: 437 KDPKTLHIYRNTIIECLKDQDISIRKKALDVAFALITKDSLKIMVKELLNYLLVA---DI 493
Query: 369 EKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAI--DVIIFVREIIEMN 426
E + + +++ A + T + L L + + I D I ++ + E +
Sbjct: 494 EIKSDIVSNICVSVNKYAPNVQYLLDTYIKLFC--LAGNFIQDHIKDDFIYYLLQNPEFH 551
Query: 427 PKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVEN 469
+ I + +N Q +V +W IGE+ L + +N
Sbjct: 552 SYVVFKIFFSIKENLDQYALIQV---GIWCIGEFGDLLIQGKN 591
Score = 96 (38.9 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 20/78 (25%), Positives = 44/78 (56%)
Query: 94 MILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNLQHRHPYIRRNAIL 153
++L+ +++N+L++ N+YI G+ L L + +E+ L +L + +PYI++ A +
Sbjct: 98 LMLVTNSIKNDLRNSNQYINGLALCALGNIANSEMCSSLRYEILDMMNINNPYIKKKAAM 157
Query: 154 AVMAIYKLPQG-EQLLVD 170
+ I K E+L ++
Sbjct: 158 CAIRILKKTNDIEELFLE 175
>UNIPROTKB|Q8IKS3 [details] [associations]
symbol:PF14_0529 "Gamma-adaptin, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0005802 "trans-Golgi network"
evidence=ISS] [GO:0030131 "clathrin adaptor complex" evidence=ISS]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR016024
InterPro:IPR017107 Pfam:PF01602 Pfam:PF02883 SMART:SM00809
InterPro:IPR013041 InterPro:IPR008153 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565
EMBL:AE014187 GO:GO:0005802 GO:GO:0030131 SUPFAM:SSF49348
HSSP:P22892 HOGENOM:HOG000210271 KO:K12391 Gene3D:2.60.40.1230
PANTHER:PTHR22780:SF5 PROSITE:PS50180 GO:GO:0044431
RefSeq:XP_001348703.1 ProteinModelPortal:Q8IKS3 IntAct:Q8IKS3
MINT:MINT-1570028 EnsemblProtists:PF14_0529:mRNA GeneID:812111
KEGG:pfa:PF14_0529 EuPathDB:PlasmoDB:PF3D7_1455500 OMA:SNQYING
ProtClustDB:CLSZ2432934 Uniprot:Q8IKS3
Length = 1081
Score = 120 (47.3 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 47/223 (21%), Positives = 91/223 (40%)
Query: 249 SLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLDRLNELRS 308
SL N A++YEC T+ +S+ P + A N + L +DNN++ + L L +L
Sbjct: 379 SLKNV-GNAILYECVKTITYISTDPGLLVLAVNVLGKFL-QNNDNNIRYVGLCTLQKLLK 436
Query: 309 SHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQSGEL 368
+ ++ L ++ IR+K LD+ LIT ++ ++
Sbjct: 437 KDPKTLHIYRNTIIECLKDQDISIRKKALDVAFALITKDSLKIMVKELLNYLLVA---DI 493
Query: 369 EKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAI--DVIIFVREIIEMN 426
E + + +++ A + T + L L + + I D I ++ + E +
Sbjct: 494 EIKSDIVSNICVSVNKYAPNVQYLLDTYIKLFC--LAGNFIQDHIKDDFIYYLLQNPEFH 551
Query: 427 PKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVEN 469
+ I + +N Q +V +W IGE+ L + +N
Sbjct: 552 SYVVFKIFFSIKENLDQYALIQV---GIWCIGEFGDLLIQGKN 591
Score = 96 (38.9 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 20/78 (25%), Positives = 44/78 (56%)
Query: 94 MILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNLQHRHPYIRRNAIL 153
++L+ +++N+L++ N+YI G+ L L + +E+ L +L + +PYI++ A +
Sbjct: 98 LMLVTNSIKNDLRNSNQYINGLALCALGNIANSEMCSSLRYEILDMMNINNPYIKKKAAM 157
Query: 154 AVMAIYKLPQG-EQLLVD 170
+ I K E+L ++
Sbjct: 158 CAIRILKKTNDIEELFLE 175
>CGD|CAL0003949 [details] [associations]
symbol:APL2 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005768 "endosome"
evidence=IEA] [GO:0030121 "AP-1 adaptor complex" evidence=IEA]
[GO:0006896 "Golgi to vacuole transport" evidence=IEA] [GO:0016197
"endosomal transport" evidence=IEA] [GO:0070317 "negative
regulation of G0 to G1 transition" evidence=IEA] [GO:0030276
"clathrin binding" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 PIRSF:PIRSF002291 CGD:CAL0003949 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0030117
GO:GO:0016192 GO:GO:0008565 GO:GO:0035690 eggNOG:COG5096
PANTHER:PTHR11134 EMBL:AACQ01000027 RefSeq:XP_719930.1
ProteinModelPortal:Q5AEN7 STRING:Q5AEN7 GeneID:3638343
KEGG:cal:CaO19.231 Uniprot:Q5AEN7
Length = 774
Score = 167 (63.8 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 99/487 (20%), Positives = 208/487 (42%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
E+K L + DA+++ I + G+ + LF +++ + + D +KL+ LYL
Sbjct: 38 ELKNGLVSQYKHERKDAIQRVIQAMTVGKDVSSLFPDVLKNIA-TYDLEQKKLVYLYLMN 96
Query: 81 IDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
KT+ PE+ ++ N + + PN IR + +R + + +++E L + +
Sbjct: 97 YAKTN------PELCILAVNTFVQDTEDPNPLIRALAIRTMGCIRVAKMVEYLEIPLQRT 150
Query: 140 LQHRHPYIRRNAILAVMAIYKL-PQ-----G-----EQLLVDAPEMIE----KVLSTEQD 184
L +PY+R+ A + V ++ L P+ G ++LL D M+ LS +D
Sbjct: 151 LADENPYVRKTAAICVAKLFDLNPEMCVEFGFLDELKKLLSDPNPMVVANAINALSEIRD 210
Query: 185 PSAKRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXX 244
+ N ++ F + IN LL ++ +EWG + +L + + N
Sbjct: 211 MNTNENLEILAFNRE---VINSLLLCLNECTEWGRI---TILNTLAEYDTDNSEEANHIM 264
Query: 245 XXXXSLLNAPSTAVIYECAGTLVS-LSSAP-TAIRAAANTYSQL------LLSQSDNNVK 296
L + +V+ ++ L++ P TA R+ N +L L+S S +
Sbjct: 265 GRVIPQLQHVNPSVVLSSIKAILHHLNAIPVTAQRS--NILKKLSAPLVSLVSTSIPEAQ 322
Query: 297 LIVLDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXX 356
+ L + + + +++ + + P L ++ + L+I++ L + +N
Sbjct: 323 YVGLKNIRIILEKYPNVLSKELRVFFIKYSDP-LYLKLEKLEIMIRLASEQN-------- 373
Query: 357 XXXXXXTQSGELEKNG-EYRQML----IQAIHSCAIKFPEVASTVVHLLMDFL----GDS 407
GEL++ E+ L I++I S AIK E A ++LL + + GD
Sbjct: 374 ----SALLLGELKEYAMEFEPALVTKAIKSIGSVAIKLQESAVKAINLLHEIIDERGGDL 429
Query: 408 NVASAIDVIIFVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEV 467
+ ++ V++ + L II + ++ ++ + +W++GEY + S +
Sbjct: 430 IINESVTVLVNILRRYPGKNDLATLIIPVISNHVNELNKTEALSGYIWLLGEYPKYFSGL 489
Query: 468 ENGIATI 474
++ +
Sbjct: 490 HKKLSDL 496
Score = 43 (20.2 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 12/32 (37%), Positives = 22/32 (68%)
Query: 648 LSEKQLRESEELK--AKAQI-SHAQPDDLIDF 676
+ +K + E+LK AK +I ++A+ D+L+DF
Sbjct: 628 VEKKNKTKIEDLKNMAKEEIITNARNDNLLDF 659
>UNIPROTKB|Q5AEN7 [details] [associations]
symbol:APL2 "Potential clathrin-associated protein AP-1
complex component" species:237561 "Candida albicans SC5314"
[GO:0035690 "cellular response to drug" evidence=IMP]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 PIRSF:PIRSF002291 CGD:CAL0003949
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0030117 GO:GO:0016192 GO:GO:0008565 GO:GO:0035690
eggNOG:COG5096 PANTHER:PTHR11134 EMBL:AACQ01000027
RefSeq:XP_719930.1 ProteinModelPortal:Q5AEN7 STRING:Q5AEN7
GeneID:3638343 KEGG:cal:CaO19.231 Uniprot:Q5AEN7
Length = 774
Score = 167 (63.8 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 99/487 (20%), Positives = 208/487 (42%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
E+K L + DA+++ I + G+ + LF +++ + + D +KL+ LYL
Sbjct: 38 ELKNGLVSQYKHERKDAIQRVIQAMTVGKDVSSLFPDVLKNIA-TYDLEQKKLVYLYLMN 96
Query: 81 IDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
KT+ PE+ ++ N + + PN IR + +R + + +++E L + +
Sbjct: 97 YAKTN------PELCILAVNTFVQDTEDPNPLIRALAIRTMGCIRVAKMVEYLEIPLQRT 150
Query: 140 LQHRHPYIRRNAILAVMAIYKL-PQ-----G-----EQLLVDAPEMIE----KVLSTEQD 184
L +PY+R+ A + V ++ L P+ G ++LL D M+ LS +D
Sbjct: 151 LADENPYVRKTAAICVAKLFDLNPEMCVEFGFLDELKKLLSDPNPMVVANAINALSEIRD 210
Query: 185 PSAKRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXX 244
+ N ++ F + IN LL ++ +EWG + +L + + N
Sbjct: 211 MNTNENLEILAFNRE---VINSLLLCLNECTEWGRI---TILNTLAEYDTDNSEEANHIM 264
Query: 245 XXXXSLLNAPSTAVIYECAGTLVS-LSSAP-TAIRAAANTYSQL------LLSQSDNNVK 296
L + +V+ ++ L++ P TA R+ N +L L+S S +
Sbjct: 265 GRVIPQLQHVNPSVVLSSIKAILHHLNAIPVTAQRS--NILKKLSAPLVSLVSTSIPEAQ 322
Query: 297 LIVLDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXX 356
+ L + + + +++ + + P L ++ + L+I++ L + +N
Sbjct: 323 YVGLKNIRIILEKYPNVLSKELRVFFIKYSDP-LYLKLEKLEIMIRLASEQN-------- 373
Query: 357 XXXXXXTQSGELEKNG-EYRQML----IQAIHSCAIKFPEVASTVVHLLMDFL----GDS 407
GEL++ E+ L I++I S AIK E A ++LL + + GD
Sbjct: 374 ----SALLLGELKEYAMEFEPALVTKAIKSIGSVAIKLQESAVKAINLLHEIIDERGGDL 429
Query: 408 NVASAIDVIIFVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEV 467
+ ++ V++ + L II + ++ ++ + +W++GEY + S +
Sbjct: 430 IINESVTVLVNILRRYPGKNDLATLIIPVISNHVNELNKTEALSGYIWLLGEYPKYFSGL 489
Query: 468 ENGIATI 474
++ +
Sbjct: 490 HKKLSDL 496
Score = 43 (20.2 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 12/32 (37%), Positives = 22/32 (68%)
Query: 648 LSEKQLRESEELK--AKAQI-SHAQPDDLIDF 676
+ +K + E+LK AK +I ++A+ D+L+DF
Sbjct: 628 VEKKNKTKIEDLKNMAKEEIITNARNDNLLDF 659
>ASPGD|ASPL0000003399 [details] [associations]
symbol:AN5950 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0044732 "mitotic spindle
pole body" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0030117 "membrane coat" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 PIRSF:PIRSF002291 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0030117 GO:GO:0016192
GO:GO:0008565 EMBL:BN001301 PANTHER:PTHR11134 OMA:VLKWATE
ProteinModelPortal:C8V3G8 EnsemblFungi:CADANIAT00007077
Uniprot:C8V3G8
Length = 717
Score = 169 (64.5 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 96/470 (20%), Positives = 194/470 (41%)
Query: 33 AKVDAMKKAI--MLLLNGETLPQLFITIVRYV-LPSEDHTIQKLLLLYLEIID--KTDAK 87
AK A+KK + M + N + + LF ++ + LPS + I+K+ L+L K D
Sbjct: 35 AKKIALKKIVANMTMSNNDMIA-LFPDVIDCMNLPSLE--IKKMCFLFLVNYSRMKPDIA 91
Query: 88 GRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNLQHRHPYI 147
+ LP ILI N+++ N +R + LR + ++ E +E + + + + PY+
Sbjct: 92 LKALP--ILI-----NDMEATNPLVRALALRTIAYIHVREYVEATVQPLKRLMGDMDPYV 144
Query: 148 RRNAILAVMAIYKLPQGEQLLVDAPEMIEKV--LSTEQDPSAKRNAFLML---------- 195
R+ A V +Y + ++ +V+A ++I+++ + +++P+ + L
Sbjct: 145 RKTAAFCVAKLY---EHDRKMVEASDLIDRLNAMLKDENPTVVSSVLASLVDIWGRSETI 201
Query: 196 -FTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXXXXXSLLNAP 254
T D A + L++ + SEWG Q +LE + + L+
Sbjct: 202 SLTIDYASA-SKLVSILPDCSEWG---QSYILEALMSYVPQDSAEALLLAERIAPRLSHQ 257
Query: 255 STAVIYECAGTLVSLSSAPTAIRAAANTYSQL------LLSQSDNNVKLIVLDRLNELRS 308
++AV+ ++ L + R + +L LLS+ V+ +VL +
Sbjct: 258 NSAVVLTSIRVILYLMNYIAEERHLTSLSKKLSPPLVTLLSKPPE-VQYLVLRNAILILQ 316
Query: 309 SHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQSGEL 368
+++ + I N P + ++ L+++ L T NI+ E+
Sbjct: 317 KRPEVLRNDIRVFFCNYNDP-IYVKVTKLELIFMLTTKENISVVLAELREYAT-----EI 370
Query: 369 EKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVREIIEMNPK 428
+ + + + ++AI AIK A + L+D + + + +R I P
Sbjct: 371 DVH--FVRKAVRAIGKLAIKIESAAKQCIDCLLDLVNAKIPYIVQEATVVIRNIFRKYPN 428
Query: 429 LRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCL 478
SII +++ N + +WIIG+Y +EN ++ L
Sbjct: 429 QYESIIGQVIQNIDDLDEPEAKAAVIWIIGQYAD---RIENSADLLQDYL 475
Score = 40 (19.1 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 13/46 (28%), Positives = 20/46 (43%)
Query: 725 SDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKL 770
SDP A V I + ++ TL+ LCL + T+ + L
Sbjct: 537 SDPTTARQVVMGQKPPISAESEKLDN--RTLEELCLNVGTLATVYL 580
>DICTYBASE|DDB_G0283319 [details] [associations]
symbol:ap4b1 "adaptor-related protein complex 4, beta
1 subunit" species:44689 "Dictyostelium discoideum" [GO:0030131
"clathrin adaptor complex" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0030659 "cytoplasmic vesicle membrane" evidence=IEA]
InterPro:IPR002553 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM01020 dictyBase:DDB_G0283319
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GenomeReviews:CM000153_GR GO:GO:0016192 GO:GO:0008565 GO:GO:0030659
EMBL:AAFI02000052 eggNOG:COG5096 GO:GO:0030131 PANTHER:PTHR11134
RefSeq:XP_639163.1 ProteinModelPortal:Q54R84
EnsemblProtists:DDB0234245 GeneID:8624033 KEGG:ddi:DDB_G0283319
OMA:SEWAQCL Uniprot:Q54R84
Length = 838
Score = 160 (61.4 bits), Expect = 7.1e-08, Sum P(2) = 7.1e-08
Identities = 54/218 (24%), Positives = 103/218 (47%)
Query: 18 IANEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLY 77
I N + A+ + D +++ I + G + LF ++ V S D I+KL+ LY
Sbjct: 27 IKNNLSTAINERNADKIKDILQRIIYYMTIGMDVSVLFPDVIM-VASSNDIIIKKLVYLY 85
Query: 78 LEIIDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSV 136
+ K++ P+++L+ N LR + N IRG+ LR LC L+ +E +
Sbjct: 86 IVHYSKSN------PDLLLLVVNTLRRDCIDRNPIIRGLALRSLCSLDSKNTLEYATIEI 139
Query: 137 LQNLQHRHPYIRRNAILAVMAIYKLP-QGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLML 195
++L Y+R+ A+L + +Y L + L + P++ + ++ +QDP NA L
Sbjct: 140 NRSLTDFSGYVRKTALLGLAKLYHLSKEAFDLDIIIPKIFDMIM--DQDPQVIVNAVSTL 197
Query: 196 FTCDQDRAINY-LLTHVD-RVSEWGELLQMVVLELIRK 231
+ + L+ H+ + E+ E Q ++LE + +
Sbjct: 198 NEIKPGWSFTFDLVQHLMIKFKEFNEWSQCIILECLSR 235
Score = 51 (23.0 bits), Expect = 7.1e-08, Sum P(2) = 7.1e-08
Identities = 22/90 (24%), Positives = 36/90 (40%)
Query: 724 FSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVERPQN-YTLAPE 782
F DP+Y + +I + T I E LQ L E GD L ++ N T+ +
Sbjct: 334 FDDPLYIKTLKVQVLKEIASNQTFIESIDEILQELS-EYVYEGDHSLCKQSINAITVIAQ 392
Query: 783 SSKQIKANIKVSSTETGVIFGNIVYETSNV 812
K + + + IF + +SN+
Sbjct: 393 KHKNTQEKYPIDESVLEKIFLPYLSVSSNL 422
Score = 38 (18.4 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 289 SQSDNNVKLIVLDRLNELRSSHRDIMVDLIMDVLRALNSPNL 330
+Q++NN L E+ SS +++ I+D L SP L
Sbjct: 675 NQNNNNQNNNSKQLLKEIESSPNNLIDTFILDQQPEL-SPEL 715
>UNIPROTKB|I3LAW4 [details] [associations]
symbol:I3LAW4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR011710
InterPro:IPR016460 Pfam:PF07718 GO:GO:0006886 GO:GO:0016192
GO:GO:0005198 GO:GO:0030126 PANTHER:PTHR10635
GeneTree:ENSGT00390000005270 EMBL:CU457766
Ensembl:ENSSSCT00000028313 OMA:VTGHVRI Uniprot:I3LAW4
Length = 127
Score = 135 (52.6 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 23/29 (79%), Positives = 25/29 (86%)
Query: 828 MDYISPAVCTDAAFRTMWAEFEWENKVSL 856
MDYI PA CTDA FR MWAEFEWENKV++
Sbjct: 1 MDYIQPATCTDAEFRQMWAEFEWENKVTV 29
>WB|WBGene00000162 [details] [associations]
symbol:apd-3 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR017105 Pfam:PF01602 PIRSF:PIRSF037092 GO:GO:0009792
GO:GO:0005794 GO:GO:0040007 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0002119 GO:GO:0030117
GO:GO:0016192 GO:GO:0008565 GO:GO:0010171 eggNOG:COG5096
GeneTree:ENSGT00550000075067 HOGENOM:HOG000000981 KO:K12396
InterPro:IPR010474 Pfam:PF06375 EMBL:FO081774 RefSeq:NP_494570.1
ProteinModelPortal:O16637 STRING:O16637 PaxDb:O16637 PRIDE:O16637
EnsemblMetazoa:W09G10.4a.1 EnsemblMetazoa:W09G10.4a.2 GeneID:173701
KEGG:cel:CELE_W09G10.4 UCSC:W09G10.4a CTD:173701 WormBase:W09G10.4a
InParanoid:O16637 OMA:ERACCAL NextBio:880723 ArrayExpress:O16637
Uniprot:O16637
Length = 1251
Score = 163 (62.4 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 104/482 (21%), Positives = 197/482 (40%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKL--LLLYL 78
EIK+ L + + K +A++K L + G + ++ V+ S +T +++ L
Sbjct: 42 EIKQELRQDSIYVKANAIEKLAYLQMLGYDISWASFNVIE-VMASTKYTEKRIGYLAAAQ 100
Query: 79 EIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQ 138
D+TD ++L +R ++ N Y G+ L L ++ L V+
Sbjct: 101 SFHDETDV-------LMLTTNLIRKDVNSSNMYESGIALGGLSCFVTPDLARDLAADVVN 153
Query: 139 NLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLFTC 198
L Y R+ A+L + I+ L + L P + EK+ + DP + +A ++
Sbjct: 154 LLSCSRNYTRKRAVLLLYKIF-LKYPDALRPTFPRLKEKL--EDPDPGVQSSAVNVICEL 210
Query: 199 DQDRAINYL-LTHVD---RVSEWGELLQMVVLELIRKVCRTNXXXXXXXXXXXXSLLNAP 254
+ NYL L V + + + +++L + +L+N+
Sbjct: 211 ARKNPKNYLTLAPVFFKLMTTSSNNWMLIKIIKLFGALVPLEPRLGKKLLEPLTNLINST 270
Query: 255 ST-AVIYECAGT----LVSLSSAPTAIRAAANTYSQL--LLSQSDNNVKLIVLDRLNELR 307
S +++YEC T L+S+S+ + +L L+ SD N+K + L + ++
Sbjct: 271 SAMSLLYECINTVIAVLISISAGGDHTASIQLCVQKLGVLIEDSDQNLKYLGLLAMGKIL 330
Query: 308 SSHRDIMVDLIMD-VLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQSG 366
+H V D VLR L+ + IR ++LD++ +++ +NI +
Sbjct: 331 KTHPKA-VQAHKDIVLRCLDDKDESIRIRSLDLLYGMVSKKNI------VEIVKKLMEHV 383
Query: 367 ELEKNGEYR-QMLIQAIHSCA-------IKFPEVASTVVHLLMDFLGDSNVASAIDVIIF 418
E + YR ++L + I C+ F S +V L G + A + I
Sbjct: 384 EAAEGSHYRDELLSRIIGICSWSNYQYITNFEWYISVLVELTK-VEGTEHGAKIAEQIQD 442
Query: 419 VREIIEMNPKLRVSIITRLLDNFYQIRA------ARVCT---CALWIIGEYCQSLSEVEN 469
V +E VS + L++N + + A + +C A WI GEY Q + +
Sbjct: 443 VTVRVESIRHFSVSQMALLVENAHVLLAGSAQQRSNMCEVLLAAAWICGEYSQHVRN-QQ 501
Query: 470 GI 471
G+
Sbjct: 502 GV 503
>TAIR|locus:2199897 [details] [associations]
symbol:GAMMA-ADAPTIN 1 "gamma-adaptin 1" species:3702
"Arabidopsis thaliana" [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA;ISS] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030131 "clathrin adaptor
complex" evidence=IEA] [GO:0030276 "clathrin binding" evidence=ISS]
[GO:0030121 "AP-1 adaptor complex" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR016024 InterPro:IPR017107
Pfam:PF01602 Pfam:PF02883 PIRSF:PIRSF037094 SMART:SM00809
InterPro:IPR013041 InterPro:IPR008153 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0016192
GO:GO:0008565 GO:GO:0006897 GO:GO:0030121 SUPFAM:SSF49348
EMBL:AF061286 EMBL:AF124524 EMBL:AJ133777 EMBL:AC002423
EMBL:BT004307 EMBL:BT005557 IPI:IPI00542209 PIR:T51951
RefSeq:NP_173802.1 RefSeq:NP_849701.1 UniGene:At.10731 HSSP:P22892
ProteinModelPortal:Q84K16 SMR:Q84K16 IntAct:Q84K16 STRING:Q84K16
PaxDb:Q84K16 PRIDE:Q84K16 EnsemblPlants:AT1G23900.1
EnsemblPlants:AT1G23900.2 GeneID:839001 KEGG:ath:AT1G23900
TAIR:At1g23900 eggNOG:NOG303101 HOGENOM:HOG000210271
InParanoid:Q84K16 KO:K12391 OMA:VETIMAI PhylomeDB:Q84K16
ProtClustDB:CLSN2682358 Genevestigator:Q84K16 Gene3D:2.60.40.1230
PANTHER:PTHR22780:SF5 PROSITE:PS50180 Uniprot:Q84K16
Length = 876
Score = 107 (42.7 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 31/102 (30%), Positives = 52/102 (50%)
Query: 77 YLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSV 136
YL ++ D + VL +L+ +L+ +L H N+Y+ G+ L L + E+ L P V
Sbjct: 89 YLGLMLLLDERQEVL---MLVTNSLKQDLNHSNQYVVGLALCALGNICSAEMARDLAPEV 145
Query: 137 LQNLQHRHPYIRRNAIL-AVMAIYKLPQGEQLLVDAPEMIEK 177
+ +Q R P IR+ A L + I K+P + V+A + K
Sbjct: 146 ERLIQFRDPNIRKKAALCSTRIIRKVPDLAENFVNAAASLLK 187
Score = 105 (42.0 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 25/98 (25%), Positives = 49/98 (50%)
Query: 252 NAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLDRLNELRSSHR 311
NA AV+YEC T++++ ++R A LS DNN++ + L+ L + +
Sbjct: 287 NA-GNAVLYECVETIMAIEDT-NSLRVLAINILGRFLSNRDNNIRYVALNMLMKAITFDD 344
Query: 312 DIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNI 349
+ + +L + P+ IR++ L++V L+ N+
Sbjct: 345 QAVQRHRVTILECVKDPDASIRKRALELVTLLVNENNV 382
>DICTYBASE|DDB_G0279537 [details] [associations]
symbol:ap3d1 "delta adaptin" species:44689
"Dictyostelium discoideum" [GO:0030123 "AP-3 adaptor complex"
evidence=IDA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0030117 "membrane coat" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006897 "endocytosis"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] [GO:0010008 "endosome membrane"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR016024
InterPro:IPR017105 Pfam:PF01602 Pfam:PF02883 PIRSF:PIRSF037092
SMART:SM00809 dictyBase:DDB_G0279537 GO:GO:0005794 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GenomeReviews:CM000152_GR GO:GO:0008565
GO:GO:0006897 GO:GO:0010008 EMBL:AAFI02000031 GO:GO:0030131
PROSITE:PS50180 GO:GO:0030123 KO:K12396 eggNOG:NOG285451
RefSeq:XP_641687.1 ProteinModelPortal:Q54WN0 STRING:Q54WN0
EnsemblProtists:DDB0234240 GeneID:8622095 KEGG:ddi:DDB_G0279537
ProtClustDB:CLSZ2430692 Uniprot:Q54WN0
Length = 1143
Score = 161 (61.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 95/462 (20%), Positives = 194/462 (41%)
Query: 20 NEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLE 79
NEIKE L+G D+ K A++K + + G + IV V+ + +++ YL
Sbjct: 29 NEIKEELKG-DMQKKTVAVQKLTYIQMLGFDISWASFKIVE-VMSCNKFSSKRIG--YLA 84
Query: 80 IIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
+ V+ +L +R + N+ + L L + T++ L +L
Sbjct: 85 ASQSFNEGTDVI---VLATHQIRKDFLSSNQSEAYLALNCLSNICTTDLARELANDILTL 141
Query: 140 LQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLFTCD 199
L + +I + AI + I+ L E L P++ EK+ + +PS + ++
Sbjct: 142 LSTQKTHILKRAITVLYKIF-LRYPESLRPAFPKLREKL--DDPEPSVVSCSVNVICELA 198
Query: 200 QDRAINYL-LTHV------DRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXXXXXSLLN 252
+ NYL L V + + + L+++V +L + +++N
Sbjct: 199 RRNPKNYLPLAPVLFRILTNTTNNYWMLIKIV--KLFAALTPHEPRLGKKLIDPLTNIIN 256
Query: 253 A-PSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLDRLNELRSSHR 311
+ PS +++YEC T ++ S + + + L+ +D N+K + L LN + H
Sbjct: 257 SSPSVSLLYECIQTCITGMSDHIPLMKLCISKLRTLIEHNDQNLKYLGLLALNNIMKIHP 316
Query: 312 DIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQSGELEKN 371
+ + VL L ++ IR + LD++ + + +NI +
Sbjct: 317 KAVSEHRDLVLNCLEDDDISIRLRALDLLPGMTSKKNIGDIVFKLLDHLDNAE------- 369
Query: 372 GEYRQMLIQAI-HSCAI-------KFPEVASTVVHL--LMDFLGDSNVASAI-DVIIFVR 420
G+Y++ +I+ I C++ F + +V L + D + +AS + DV+I V+
Sbjct: 370 GQYKEQIIEKIIELCSMGTYQFITDFEWYINILVKLSQIQDSIHGKLIASQLLDVVIRVK 429
Query: 421 EIIEMNPKLRVSIIT--RLLDNFYQIRAARVCTCALWIIGEY 460
+ + + + ++ +L+ N + V A WI+GE+
Sbjct: 430 IVRAYSTRQMIELLKNPKLMSNPTEGGMCEVLYAAAWIVGEF 471
>UNIPROTKB|I3LRS3 [details] [associations]
symbol:I3LRS3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030123 "AP-3 adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR026739 InterPro:IPR026740
Pfam:PF01602 PIRSF:PIRSF037096 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
PANTHER:PTHR11134 GeneTree:ENSGT00530000063546 GO:GO:0030123
PANTHER:PTHR11134:SF1 Ensembl:ENSSSCT00000024280 OMA:ESADSXT
Uniprot:I3LRS3
Length = 995
Score = 146 (56.5 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 42/163 (25%), Positives = 85/163 (52%)
Query: 20 NEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLE 79
+++KE L+ N K++AMK+ + ++ G+ LF +V+ V ++ ++KL+ +YL
Sbjct: 3 DDLKEMLDTNKDSLKLEAMKRIVAMIARGKNASDLFPAVVKNVA-CKNIEVKKLVYVYL- 60
Query: 80 IIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
+ + + + +L + L+ PN+ IR LR L + I+ ++ ++ +
Sbjct: 61 -VRYAEEQQDLA---LLSISTFQRGLKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEA 116
Query: 140 LQHRHPYIRRNAILAVMAIYKLP--QGEQLLVDAPEMIEKVLS 180
PY+R+ A A+ +Y L Q +QL+ E+IEK+L+
Sbjct: 117 ASDMSPYVRKTAAHAIPKLYSLDSDQKDQLI----EVIEKLLA 155
Score = 73 (30.8 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 19/73 (26%), Positives = 35/73 (47%)
Query: 379 IQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVREIIEMNPKLRVSII---T 435
IQAI CA V T ++ L+ L + + + ++ ++++++M P II
Sbjct: 348 IQAIGRCATNIGRVRDTCLNGLVQLLSNRDELVVAESVVVIKKLLQMQPAQHGEIIKHLA 407
Query: 436 RLLDNFYQIRAAR 448
+L DN + A R
Sbjct: 408 KLTDNIQVMMAQR 420
Score = 37 (18.1 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 17/62 (27%), Positives = 24/62 (38%)
Query: 485 SVSEEGEDTDSSKKXXXXXXXXXXXXRRPAVLADGTYATQS---AASETA------FSPP 535
S S+EG D+ SS PA T ++ AA E + F+PP
Sbjct: 682 SSSDEGSDSSSSSSESEMTSETEEEQVEPASWRKKTPSSSKSAPAAKEISLLDLEDFTPP 741
Query: 536 TI 537
+I
Sbjct: 742 SI 743
>POMBASE|SPBC2G2.06c [details] [associations]
symbol:apl1 "AP-2 adaptor complex subunit Apl1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006886 "intracellular protein transport" evidence=IC]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=ISO] [GO:0030122
"AP-2 adaptor complex" evidence=ISO] [GO:0044732 "mitotic spindle
pole body" evidence=IDA] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602
PIRSF:PIRSF002291 PomBase:SPBC2G2.06c GO:GO:0005829 GO:GO:0005634
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0044732 GO:GO:0008565 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0030122 eggNOG:COG5096
HOGENOM:HOG000163270 PANTHER:PTHR11134 PIR:T40145
RefSeq:NP_596435.1 ProteinModelPortal:O43005 STRING:O43005
EnsemblFungi:SPBC2G2.06c.1 GeneID:2540375 KEGG:spo:SPBC2G2.06c
OMA:VLKWATE OrthoDB:EOG476P7N NextBio:20801503 Uniprot:O43005
Length = 677
Score = 120 (47.3 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 53/208 (25%), Positives = 95/208 (45%)
Query: 34 KVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI---IDKTDAKGRV 90
++ A+KKAI + G + LF +++ + S + ++KL LYL+I + T+AK V
Sbjct: 31 RISALKKAIAGISYGYDMSSLFPSVISS-MESNNLELKKLCYLYLKIYASVKPTEAKRAV 89
Query: 91 LPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNLQHRHPYIRRN 150
++IL N++ N IR + LR L +N + +++ L PY+R+
Sbjct: 90 --KLIL------NDIYSSNPMIRSLALRTLTSVNIKNFWVAAMDPIVRLLDDTDPYVRKT 141
Query: 151 AILAVMAIY----KLPQGEQLLVDAPEMI--EKVLSTEQDPSAKRNAFLML--FTCDQDR 202
A + + +Y K+ + L+ EM+ E + +A N F R
Sbjct: 142 AAIGIAKLYSYDKKMVESSGLIDHLKEMLSDESSVVVANSLAALMNIVNSSTGFKLTFSR 201
Query: 203 AI-NYLLTHVDRVSEWGELLQMVVLELI 229
I N L+ + SEW LQ+ +L+ +
Sbjct: 202 EISNKLVKSLTDCSEW---LQVAILDAL 226
Score = 85 (35.0 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 23/101 (22%), Positives = 49/101 (48%)
Query: 379 IQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAI-DVIIFVREIIEMNPKLRVSIITRL 437
++ I AIK E + + L++ + ++ V I + +I +R+I+ P S++ L
Sbjct: 374 VKCIGYLAIKIEERKNDCIDSLIELM-NTKVTYVIQEAVIVIRDILRKYPGSYKSLVPIL 432
Query: 438 LDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCL 478
+N + + +WI+G+Y + E+E+ I + L
Sbjct: 433 YENLDSLDEPDAKSAVIWILGQYAE---EIEDSITLLNDYL 470
>UNIPROTKB|F5GWU4 [details] [associations]
symbol:AP3B2 "AP-3 complex subunit beta-2" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0030123 "AP-3 adaptor complex" evidence=IEA]
[GO:0008089 "anterograde axon cargo transport" evidence=IEA]
[GO:0048490 "anterograde synaptic vesicle transport" evidence=IEA]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR026739
InterPro:IPR026740 Pfam:PF01602 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
PANTHER:PTHR11134 GO:GO:0030123 PANTHER:PTHR11134:SF1 HGNC:HGNC:567
EMBL:AC105339 EMBL:FJ695193 IPI:IPI01012451
ProteinModelPortal:F5GWU4 SMR:F5GWU4 Ensembl:ENST00000541693
ArrayExpress:F5GWU4 Bgee:F5GWU4 Uniprot:F5GWU4
Length = 193
Score = 137 (53.3 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 51/204 (25%), Positives = 99/204 (48%)
Query: 26 LEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEIIDKTD 85
L+ N K++AMK+ + ++ G+ LF +V+ V ++ ++KL+ +YL + +
Sbjct: 2 LDTNKDSLKLEAMKRIVAMIARGKNASDLFPAVVKNVA-CKNIEVKKLVYVYL--VRYAE 58
Query: 86 AKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNLQHRHP 145
+ + +L + L+ PN+ IR LR L + I+ ++ ++ + P
Sbjct: 59 EQQDLA---LLSISTFQRGLKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEAASDMSP 115
Query: 146 YIRRNAILAVMAIYKLP--QGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLF--TCDQD 201
Y+R+ A A+ +Y L Q +QL+ E+IEK+L+ + A + +M F C +
Sbjct: 116 YVRKTAAHAIPKLYSLDSDQKDQLI----EVIEKLLADKTTLVA--GSVVMAFEEVCPER 169
Query: 202 RAI---NY--LLTHVDRVSEWGEL 220
+ NY L + V EWG++
Sbjct: 170 IDLIHKNYRKLCNLLIDVEEWGQV 193
>WB|WBGene00011775 [details] [associations]
symbol:T14G10.5 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0005798 "Golgi-associated vesicle"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0032940 "secretion by cell"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
InterPro:IPR002553 InterPro:IPR009028 InterPro:IPR013040
InterPro:IPR014863 InterPro:IPR015873 InterPro:IPR016024
Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041 GO:GO:0006898
GO:GO:0040010 GO:GO:0006915 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0002119 GO:GO:0032940
GO:GO:0005198 GO:GO:0040011 GO:GO:0000003 SUPFAM:SSF55711
SUPFAM:SSF49348 Gene3D:3.30.310.30 GO:GO:0030126
GeneTree:ENSGT00390000016313 Gene3D:2.60.40.1480 InterPro:IPR017106
PANTHER:PTHR10261 PIRSF:PIRSF037093 OMA:WDEVGEE EMBL:Z68880
GeneID:177891 KEGG:cel:CELE_T14G10.5 CTD:177891
RefSeq:NP_001255464.1 ProteinModelPortal:F5GUA3 SMR:F5GUA3
EnsemblMetazoa:T14G10.5c WormBase:T14G10.5c Uniprot:F5GUA3
Length = 885
Score = 162 (62.1 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 92/467 (19%), Positives = 199/467 (42%)
Query: 10 HFDKGTPAIANEIKEALEGNDVPAKVDA----MKKAIMLLLNGETL-----PQLFITIVR 60
H DK + ++EA N+ P + K I ++ GE++ + F + +
Sbjct: 30 HLDK-----TSVLQEARAFNETPINARKCCFILSKLIYIIQQGESIGRTEATEAFFGVTK 84
Query: 61 YVLPSEDHTIQKLLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFL 120
+ S+D ++++++ YL + + + V ++I++ +L ++ + R +R L
Sbjct: 85 -LWQSKDVSLRRMV--YLAVKELAE----VSDDVIIVTSSLTKDMTGREDLYRAAAIRAL 137
Query: 121 CRLNETEIIEPLIPSVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLS 180
C++ +T +++ + + Q + R+ I +AI V +I+ + + +++ +++ +S
Sbjct: 138 CKITDTGMLQTIERYMKQAIVDRNSAISSSAI--VSSIHLMRKSSEVVRRWANEVQEAVS 195
Query: 181 TEQDPSAKRNAFLMLFTCD-QDR-AINYLLTHVDRVSEWGELLQMVVLELIRKVCRT--- 235
++ + +A +L+ DR A+N L V + S+ V LIR R
Sbjct: 196 SDNH-MVQYHALALLYQIRANDRLAVNKL---VQKFSKNALRSPYAVCYLIRIATRCLVD 251
Query: 236 --NXXXXXXXXXXXXSLLNAPSTAVIYECAGTLVSL-SSAPTAIRAAANTYSQLLLSQSD 292
+ S L S V+YE A +VSL + P+ I+ A T Q+ +
Sbjct: 252 DDHCRPDSSVFTFIESCLRHKSEMVVYEAARAIVSLPQTTPSEIQPAI-TALQMCCTSPK 310
Query: 293 NNVKLIVLDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXX 352
V+ + LN++ +H + ++ +D+ + + PN I TL I L T +
Sbjct: 311 AAVRFAAVRTLNKVAMAHPNAVMSCNVDLEKFITDPNRSIA--TLAITTLLKTGAESSVE 368
Query: 353 XXXXXXXXXXTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFL-GDSNVAS 411
+ + E++ +++ AI S ++P + ++ L L D +
Sbjct: 369 RLMQQIAGFVNEISD-----EFKIVVVDAIRSLCSRYPRKHTVMMPFLAKMLRSDGSYDY 423
Query: 412 AIDVIIFVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIG 458
++ + IIE NP +V+ + L + + T L ++G
Sbjct: 424 KKAIVETIIAIIEENPDAKVAGLAHLCEFIEDCEHDNLSTRVLHLLG 470
Score = 43 (20.2 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 12/53 (22%), Positives = 24/53 (45%)
Query: 704 EFVKEGDDANKLNRILQLTGFSDPVYAE--AYVTVHHYDIVLDVTVINRTKET 754
EF+++ + N R+L L G P +Y+ + ++L+ T + T
Sbjct: 451 EFIEDCEHDNLSTRVLHLLGREAPKTPNPSSYIRFIYNRVILESTKVRAAAVT 503
>POMBASE|SPCP1E11.06 [details] [associations]
symbol:apl4 "AP-1 adaptor complex gamma subunit Apl4"
species:4896 "Schizosaccharomyces pombe" [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] [GO:0006886 "intracellular protein
transport" evidence=IC] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IMP] [GO:0016197 "endosomal transport" evidence=IMP]
[GO:0030121 "AP-1 adaptor complex" evidence=IDA] [GO:0030276
"clathrin binding" evidence=ISO] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR016024 InterPro:IPR017107
Pfam:PF01602 Pfam:PF02883 PIRSF:PIRSF037094 SMART:SM00809
PomBase:SPCP1E11.06 InterPro:IPR013041 InterPro:IPR008153
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0008565
GO:GO:0005768 GO:GO:0016197 GO:GO:0030121 GO:GO:0030276
eggNOG:COG5096 SUPFAM:SSF49348 HOGENOM:HOG000210271 KO:K12391
Gene3D:2.60.40.1230 PANTHER:PTHR22780:SF5 PROSITE:PS50180
PIR:T41685 RefSeq:NP_588559.1 ProteinModelPortal:Q9UU81
STRING:Q9UU81 EnsemblFungi:SPCP1E11.06.1 GeneID:2539311
KEGG:spo:SPCP1E11.06 OMA:DERSEVH OrthoDB:EOG4X9BRC NextBio:20800477
Uniprot:Q9UU81
Length = 865
Score = 112 (44.5 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 49/214 (22%), Positives = 86/214 (40%)
Query: 252 NAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLDRLNELRSSHR 311
NA A++Y+ T++ L+S +++R L DNN + + L+ L + +S
Sbjct: 311 NA-GNAILYQAVRTILDLNS-DSSLRVLGVNILAKFLGNRDNNTRYVALNMLKLVVNSEE 368
Query: 312 DIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQSGELEKN 371
+ + +L LN + I+ + L++ L+ N+ S EL
Sbjct: 369 NAVQRHRSTILACLNDVDSSIQSRALELSTFLVNEANVRFMVRELLSFLDNV-SDELR-- 425
Query: 372 GEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVREIIEMNPKLRV 431
G Q + + ++ A P LL F N S + F+R +I P+L
Sbjct: 426 GSTAQYITEVTNAFA---PNKRWHFDTLLRVFKSAGNFVSESTLSTFLR-LIASAPELHE 481
Query: 432 SIITRLLDNFYQIRAARVCTC-ALWIIGEYCQSL 464
+ +L + + T A W+IGEY Q L
Sbjct: 482 YAVVKLYAALKEDVSQEALTLSAFWVIGEYGQML 515
Score = 94 (38.1 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 42/159 (26%), Positives = 70/159 (44%)
Query: 13 KGTPAIANEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQK 72
K + I I++ ND+ + + K + L L GE P F I L S + K
Sbjct: 55 KESAQIRKNIRQG--SNDMRMRRKNVAKLLYLFLLGE--PTHFGQIECLKLLSSSRFMDK 110
Query: 73 LLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPL 132
L YL + D VL L+ +L+N+L+ +++I G+ L + E+ L
Sbjct: 111 RLG-YLAAMLLLDENQEVLT---LLTNSLQNDLKSRDKFIVGLALSAFGNVAGPELARDL 166
Query: 133 IPSVLQNLQHRHPYIRRNAIL-AVMAIYKLPQGEQLLVD 170
+ + + H YI + A+L A+ I K P E L ++
Sbjct: 167 SNDIAELCSNHHNYISKKAVLCALRVIQKEPDLESLYIE 205
>CGD|CAL0003993 [details] [associations]
symbol:APL5 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0006896 "Golgi to vacuole transport"
evidence=IEA] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR017105 Pfam:PF01602 PIRSF:PIRSF037092 CGD:CAL0003993
GO:GO:0005794 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0030117 GO:GO:0016192 GO:GO:0008565
eggNOG:NOG285451 EMBL:AACQ01000027 EMBL:AACQ01000026
RefSeq:XP_719947.1 RefSeq:XP_720078.1 ProteinModelPortal:Q5AEM0
STRING:Q5AEM0 GeneID:3638248 GeneID:3638377 KEGG:cal:CaO19.248
KEGG:cal:CaO19.7879 Uniprot:Q5AEM0
Length = 1099
Score = 155 (59.6 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 89/344 (25%), Positives = 147/344 (42%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
E + L D+ K A+ K L + G + I+ + S+ Q+ + YL
Sbjct: 54 ECRNELTTTDLETKAMAILKLAYLEMYGFDMSWCNFQILEVMSSSK---FQQKRIGYLAA 110
Query: 81 IDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNL 140
I + +L IL + +L N G+ L + + + + + VL L
Sbjct: 111 IQSFKNEQDLL---ILATNQFKKDLNSHNHVDIGLALSGIATIVTPSLAKDINDDVLMKL 167
Query: 141 QHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLSTE-QDPSAKRNAFLMLFTCD 199
H PYIR+ AILA+ I+ L E L ++ +IEK+ E SA N + +
Sbjct: 168 NHSKPYIRKKAILAMYKIF-LQYPESLRLNFNRVIEKLDDLEIAVVSATVNVICEISKKN 226
Query: 200 QDRAINYLLTHV----DRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXXXXXSL-LNAP 254
+ INYL D + W L + +L+L + + + L L
Sbjct: 227 PNIFINYLPKFFAILEDTKNNW---LIIRILKLFQSLSKVEPRMKKKILPTIIDLMLRTQ 283
Query: 255 STAVIYECAGTLVS---LSSAPTAIRAAANT-YSQLLLS--QSDNNVKLIVLDRL-NELR 307
++++IYEC +VS LS+ + + A +QL L +D+N+K + L L N L+
Sbjct: 284 ASSLIYECINCIVSGQMLSADSSKDKETAKLCINQLKLFFLTNDSNLKFVGLIALINTLK 343
Query: 308 SSHRDIM-VDLIMD-VLRALNSPNLDIRRKTLDIVLELITPRNI 349
I V+ I + VL LN +L I+RK L++ L+ NI
Sbjct: 344 IFPILINDVEGISEIVLECLNDRDLIIKRKALEVSNYLVNEDNI 387
Score = 52 (23.4 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 16/51 (31%), Positives = 23/51 (45%)
Query: 419 VREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVEN 469
VR + N L + RLLD+ +A + WI+GEY L +N
Sbjct: 485 VRSYLLQNVVLELVQDVRLLDS-----SALILKDLYWILGEYISELKVTQN 530
Score = 47 (21.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 38/152 (25%), Positives = 68/152 (44%)
Query: 691 EDEVQDDLKRATGEFVKEG---DDANKLNRILQLTGFSDPVYAEAYVTVHHYDIVLDVT- 746
ED + + +K + V + DD KL L++ + YV + ++ + V
Sbjct: 384 EDNITEVVKIMLMQLVPDNNMIDDMLKLEITLKILQIASQ---NNYVNIPNFRWYVAVLK 440
Query: 747 -VINRTKETLQNLCLELATMGDLKLVERPQNYTLAPESSKQIKANI--KVSSTETGVIFG 803
VIN T L +E AT L + N ++ E K+ K N+ KV S + +
Sbjct: 441 DVINLTL-----LPVEGATNSGL-IASHIAN-EISTEVGKEFK-NLATKVPSVRS-YLLQ 491
Query: 804 NIVYETSN---VLERTVVVLNDIHIDIMDYIS 832
N+V E +L+ + ++L D++ + +YIS
Sbjct: 492 NVVLELVQDVRLLDSSALILKDLYWILGEYIS 523
>DICTYBASE|DDB_G0289371 [details] [associations]
symbol:copG "adaptin N-terminal domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0030126 "COPI
vesicle coat" evidence=IEA;ISS] [GO:0030117 "membrane coat"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005798 "Golgi-associated vesicle" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=ISS] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0030663
"COPI-coated vesicle membrane" evidence=IEA] [GO:0000139 "Golgi
membrane" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR002553 InterPro:IPR009028
InterPro:IPR013040 InterPro:IPR014863 InterPro:IPR015873
InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041
dictyBase:DDB_G0289371 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0005198
GenomeReviews:CM000154_GR EMBL:AAFI02000139 GO:GO:0006891
SUPFAM:SSF55711 SUPFAM:SSF49348 Gene3D:3.30.310.30 GO:GO:0030126
eggNOG:COG5240 Gene3D:2.60.40.1480 InterPro:IPR017106
PANTHER:PTHR10261 PIRSF:PIRSF037093 HSSP:P53620 RefSeq:XP_636291.1
ProteinModelPortal:Q54HL0 IntAct:Q54HL0 STRING:Q54HL0 PRIDE:Q54HL0
EnsemblProtists:DDB0233801 GeneID:8627109 KEGG:ddi:DDB_G0289371
OMA:EMSSISE ProtClustDB:CLSZ2429791 Uniprot:Q54HL0
Length = 898
Score = 153 (58.9 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 79/448 (17%), Positives = 188/448 (41%)
Query: 2 EKSCTLLIHFDKGTPAIANEIKEALEGNDV-PAKVD-AMKKAIMLLLNGETLPQLFITIV 59
++S L + DKG + E K A + + P K + + + LL G++ + T +
Sbjct: 11 DESDFLFENLDKGQ--VIQE-KRAFNESPIHPRKCSLVISQFLYLLSRGDSFTKTEATDI 67
Query: 60 RY----VLPSEDHTIQKLLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGV 115
+ + S+D +++L+ L L+ + + + I++ +L ++ H E R
Sbjct: 68 FFAATKLFQSKDIPLRRLMYLLLKELST------ISQDAIIVISSLTKDMSHKIELYRAN 121
Query: 116 TLRFLCRLNETEIIEPLIPSVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMI 175
+R LC++ ++ I+ + Q++ + P++ A+ V +I+ L +++ +
Sbjct: 122 AIRILCKITDSSILPQIERYFKQSIVEKDPHVSSAAL--VSSIHLLKVCPEIVKRWANEV 179
Query: 176 EKVLSTEQDPSAKRNAFLMLFTCDQ-DR-AINYLLTHVDRVSEWGELLQMVVLELIRKVC 233
++ +S + + + +A +L Q DR A++ L++++ + S Q ++ +V
Sbjct: 180 QEAISNKSN-MVQYHALALLHRIKQHDRLAVSKLVSNLIKNSLRSPYAQSYLIRCCVEVI 238
Query: 234 RTNXXXXXXXXXXXXSLLNAPSTAVIYECAGTLVSLSSAPTA-IRAAANTYSQLLLSQSD 292
S L + + V YE A ++ + + I +A Q L+ +
Sbjct: 239 EETNTEDRIFREYIESCLRSKNEMVAYEAARSICTFKNVSNKEINSAVGVL-QNFLNSTK 297
Query: 293 NNVKLIVLDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXX 352
++ + LN+L ++ ++ +D+ + N I + +L++ N+
Sbjct: 298 PTLRFAAVRTLNKLAQTNPTAVIPCNLDMENLITDTNRSIATLAITTLLKVGNESNVERL 357
Query: 353 XXXXXXXXXXTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASA 412
G++ N E++ +++ AI S + KFP+ ++ L L D
Sbjct: 358 IKQIANFL-----GDI--NDEFKIVVVDAITSLSQKFPKKYKHLIIFLNKILRDEGTLQL 410
Query: 413 IDVII-FVREIIEMNPKLRVSIITRLLD 439
+ + ++ P+ + +T L D
Sbjct: 411 KQATLDAILTVVNNIPESKEIALTELCD 438
>TAIR|locus:2028586 [details] [associations]
symbol:AT1G31730 species:3702 "Arabidopsis thaliana"
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0030276 "clathrin binding" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006007 "glucose catabolic process" evidence=RCA]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
InterPro:IPR002553 InterPro:IPR016024 Pfam:PF01602 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0009506 GO:GO:0005794
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0030117 GO:GO:0016192 EMBL:AC074360
eggNOG:NOG303101 KO:K12400 InterPro:IPR017109 PIRSF:PIRSF037097
EMBL:AY136369 EMBL:BT000268 IPI:IPI00543823 RefSeq:NP_174454.2
UniGene:At.19687 ProteinModelPortal:Q8L7A9 SMR:Q8L7A9 STRING:Q8L7A9
PaxDb:Q8L7A9 PRIDE:Q8L7A9 ProMEX:Q8L7A9 EnsemblPlants:AT1G31730.1
GeneID:840060 KEGG:ath:AT1G31730 TAIR:At1g31730
HOGENOM:HOG000231885 InParanoid:Q8L7A9 OMA:KSDSHNL PhylomeDB:Q8L7A9
ProtClustDB:CLSN2680345 Genevestigator:Q8L7A9
PANTHER:PTHR22780:SF13 Uniprot:Q8L7A9
Length = 938
Score = 106 (42.4 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 26/93 (27%), Positives = 48/93 (51%)
Query: 257 AVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLDRLNELRSSHRDIMVD 316
A++YEC + + P + AAA+ S+ L S S +N+K + +D L L DI
Sbjct: 304 AILYECIRCISCILPNPKLLEAAADAISKFLKSDS-HNLKYMGIDGLGRLIKISPDIAEQ 362
Query: 317 LIMDVLRALNSPNLDIRRKTLDIVLELITPRNI 349
+ V+ L P+ ++RKT +++ ++ N+
Sbjct: 363 HQLAVIDCLEDPDDTLKRKTFELLYKMTKSSNV 395
Score = 96 (38.9 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 35/132 (26%), Positives = 58/132 (43%)
Query: 94 MILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNLQHRHPYIRRNAIL 153
+ILI ++ +L+ N + L +CRL E I ++P V++ L H+ +R+ AI+
Sbjct: 120 IILIVNTIQKDLRSDNYLVVCAALNAICRLINEETIPAVLPQVVELLNHQKEAVRKKAIM 179
Query: 154 AVMAIY-KLPQGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLFTCDQDRAINYLLTHVD 212
A+ + K P LV K L + DP LF + +Y D
Sbjct: 180 ALHRFHRKSPSSVSHLVSN---FRKRLC-DNDPGVMGATLCPLFDLISEDVNSYK----D 231
Query: 213 RVSEWGELLQMV 224
VS + +L+ V
Sbjct: 232 LVSSFVSILKQV 243
>UNIPROTKB|K7EJT8 [details] [associations]
symbol:AP2B1 "AP-2 complex subunit beta" species:9606 "Homo
sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013037 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883
Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020
InterPro:IPR013041 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:2.60.40.1150 Gene3D:3.30.310.10
InterPro:IPR012295 PANTHER:PTHR11134 SUPFAM:SSF55711
SUPFAM:SSF49348 EMBL:AC006237 HGNC:HGNC:563 EMBL:AC015911
EMBL:AC004134 Ensembl:ENST00000592545 Uniprot:K7EJT8
Length = 913
Score = 150 (57.9 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 80/412 (19%), Positives = 167/412 (40%)
Query: 79 EIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQ 138
E + K A V ++ + ++ N +Q N ++ + +L +++ + I +V
Sbjct: 32 EAVKKVIAAMTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQP-DMAIMAVNS 90
Query: 139 NLQHRHPYIRRNAILAVMAIYKL------PQG-----EQLLVDA-PEMIEKVLSTEQDPS 186
++ PY+R+ A + V ++ + QG L+ D+ P ++ ++ + S
Sbjct: 91 FVKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALSEIS 150
Query: 187 AKRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXXX 246
+L Q+ IN LLT ++ +EWG Q+ +L+ + +
Sbjct: 151 ESHPNSNLLDLNPQN--INKLLTALNECTEWG---QIFILDCLSNYNPKDDREAQSICER 205
Query: 247 XXSLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLL---------LSQSDNNVKL 297
L+ ++AV+ L+ + ++ Y+ LL L + V+
Sbjct: 206 VTPRLSHANSAVVLSAVKVLMKFLEL---LPKDSDYYNMLLKKLAPPLVTLLSGEPEVQY 262
Query: 298 IVLDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXX 357
+ L +N + +I+ I N P + ++ + LDI++ L + NI
Sbjct: 263 VALRNINLIVQKRPEILKQEIKVFFVKYNDP-IYVKLEKLDIMIRLASQANI-------A 314
Query: 358 XXXXXTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAI-DVI 416
+ E + ++ + ++AI CAIK + A V L+D + + V + + I
Sbjct: 315 QVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLI-QTKVNYVVQEAI 373
Query: 417 IFVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVE 468
+ +R+I P SII L +N + +WI+GEY + + +
Sbjct: 374 VVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNAD 425
>UNIPROTKB|G5E988 [details] [associations]
symbol:AP3D1 "AP-3 complex subunit delta-1" species:9606
"Homo sapiens" [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR017105 Pfam:PF01602 PIRSF:PIRSF037092 GO:GO:0005794
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0030117 GO:GO:0016192 GO:GO:0008565 EMBL:CH471139
InterPro:IPR010474 Pfam:PF06375 EMBL:AC005545 UniGene:Hs.512815
HGNC:HGNC:568 ChiTaRS:AP3D1 GenomeRNAi:8943 NextBio:33636
EMBL:AC005328 EMBL:AC005257 ProteinModelPortal:G5E988 SMR:G5E988
PRIDE:G5E988 Ensembl:ENST00000356926 ArrayExpress:G5E988
Bgee:G5E988 Uniprot:G5E988
Length = 1112
Score = 106 (42.4 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 63/262 (24%), Positives = 121/262 (46%)
Query: 249 SLLNAPST-AVIYECAGT----LVSLSSAPTAIRAAANTYSQ---LLLSQSDNNVKLIVL 300
+L+++ S +++YEC T L+SLSS A+ Q +L+ SD N+K + L
Sbjct: 174 NLIHSTSAMSLLYECVNTVIAVLISLSSGMPNHSASIQLCVQKLRILIEDSDQNLKYLGL 233
Query: 301 DRLNELRSSHRDIMVDLIMD-VLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXX 359
++++ +H V D +L+ L+ + IR + LD++ +++ +N+
Sbjct: 234 LAMSKILKTHPK-SVQSHKDLILQCLDDKDESIRLRALDLLYGMVSKKNL-----MEIVK 287
Query: 360 XXXTQSGELEKNGEYR-QMLIQAIHSCA-------IKFPEVASTVVHLL-MDFLGDSNVA 410
T + E YR ++L + I C+ F S +V L ++ ++
Sbjct: 288 KLMTHVDKAEGT-TYRDELLTKIIDICSQSNYQYITNFEWYISILVELTRLEGTRHGHLI 346
Query: 411 SA--IDVIIFVREIIEMNPKLRVSIITRLLDNFYQIRAAR----VCT---CALWIIGEYC 461
+A +DV I V+ I K VS ++ LLD+ + + ++ +C A WI GE+
Sbjct: 347 AAQMLDVAIRVKAI----RKFAVSQMSALLDSAHLLASSTQRNGICEVLYAAAWICGEFS 402
Query: 462 QSLSEVENGI-ATIKQCLGELP 482
+ L E + + A ++ + LP
Sbjct: 403 EHLQEPHHTLEAMLRPRVTTLP 424
Score = 97 (39.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 33/135 (24%), Positives = 66/135 (48%)
Query: 20 NEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLE 79
+EIK+ L+ +++ K +A+ K L + G + I+ V+ + T +++ YL
Sbjct: 41 DEIKQELKQDNIAVKANAVCKLTYLQMLGYDISWAAFNIIE-VMSASKFTFKRIG--YLA 97
Query: 80 IIDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQ 138
++ +G ++I++ N +R +L P++Y GV L L ++ L ++
Sbjct: 98 A-SQSFHEGT---DVIMLTTNQIRKDLSSPSQYDTGVALTGLSCFVTPDLARDLANDIMT 153
Query: 139 NLQHRHPYIRRNAIL 153
+ H PYIR+ A L
Sbjct: 154 LMSHTKPYIRKKAKL 168
>ZFIN|ZDB-GENE-030616-587 [details] [associations]
symbol:ap1g2 "adaptor-related protein complex 1,
gamma 2 subunit" species:7955 "Danio rerio" [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030131 "clathrin
adaptor complex" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR002553 InterPro:IPR008152
InterPro:IPR016024 InterPro:IPR017107 Pfam:PF01602 Pfam:PF02883
PIRSF:PIRSF037094 SMART:SM00809 InterPro:IPR013041
InterPro:IPR008153 ZFIN:ZDB-GENE-030616-587 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 GO:GO:0030131 SUPFAM:SSF49348 Gene3D:2.60.40.1230
PANTHER:PTHR22780:SF5 PROSITE:PS50180 GeneTree:ENSGT00390000012618
GO:GO:0044431 EMBL:FP017218 IPI:IPI00610034
Ensembl:ENSDART00000076503 ArrayExpress:F1QYF4 Bgee:F1QYF4
Uniprot:F1QYF4
Length = 831
Score = 101 (40.6 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 50/247 (20%), Positives = 101/247 (40%)
Query: 221 LQMVVLELIRKVCRTNXXXXXXXXXXXXSLL-NAPST-----AVIYECAGTLVSLSSAPT 274
LQ+ +L L+R + N + N S+ AV+YE T++ ++S +
Sbjct: 270 LQVRILRLLRILGHNNDSASDAMNDLLAQVATNTDSSKTAGSAVLYETVLTIMDINSE-S 328
Query: 275 AIRA-AANTYSQLLLSQSDNNVKLIVLDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIR 333
+R A N + LL+ +D N++ I + L ++ + + + ++ L + ++
Sbjct: 329 GLRVLAVNILGRFLLN-NDRNIRYISMTSLQKIVQTDHNAVQRHRGTIVDCLKDQDTSVK 387
Query: 334 RKTLDIVLELITPRNINXXXXXXXXXXXXTQSGELEKNGEYRQMLIQAIHSCAIKFPEVA 393
R+ L++ L L++P NI S +E + + A +
Sbjct: 388 RRALELSLALVSPVNIRSMMKELLIFLS---SCPVELRSQTASGIFNAAERYSPSKRWHI 444
Query: 394 STVVHLLMDFLGDSNVASAIDVIIFVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCA 453
T++H+L GD + ++I + E++ + L+ + Q +V A
Sbjct: 445 DTILHVLTTAGGDVRDETVPNLIQLITTASELHCYTVHKLYRALVKDISQQSLVQV---A 501
Query: 454 LWIIGEY 460
W IGEY
Sbjct: 502 CWCIGEY 508
Score = 97 (39.2 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 22/74 (29%), Positives = 43/74 (58%)
Query: 95 ILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNLQHRHPYIRRNAIL- 153
+LI +++N+L H ++Y++ + L L + +E+ L P + + L+ YI++ A L
Sbjct: 126 LLITNSIKNDLSHSSQYVQSLALCTLACMGSSEMCRDLAPEIERLLRASTSYIKKKATLC 185
Query: 154 AVMAIYKLPQGEQL 167
AV I K+P+ +L
Sbjct: 186 AVHIIRKVPELAEL 199
Score = 72 (30.4 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 24/108 (22%), Positives = 49/108 (45%)
Query: 18 IANEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDH-TIQKLLLL 76
+A EI+ L + K A A+ ++ L +LF R +L ++H + ++L
Sbjct: 163 LAPEIERLLRASTSYIKKKATLCAVHIIRKVPELAELFTPSARSLLSEKNHGVLHGAVVL 222
Query: 77 YLEIIDKT----DAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFL 120
E+ ++ D + +PE++ I + L + P + G++ FL
Sbjct: 223 ITELCERNAETLDKFRKAVPELVTIMKGLVTSSYSPEHNVAGISDPFL 270
>UNIPROTKB|E1C7T8 [details] [associations]
symbol:COPG2 "Coatomer subunit gamma" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR013040 InterPro:IPR014863 InterPro:IPR015873
InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0005198 SUPFAM:SSF49348 Gene3D:3.30.310.30
GO:GO:0030126 GeneTree:ENSGT00390000016313 Gene3D:2.60.40.1480
InterPro:IPR017106 PANTHER:PTHR10261 PIRSF:PIRSF037093 CTD:26958
OMA:SEEGHES EMBL:AADN02039801 IPI:IPI00596855 RefSeq:XP_414981.2
Ensembl:ENSGALT00000013228 GeneID:416685 KEGG:gga:416685
NextBio:20820109 Uniprot:E1C7T8
Length = 871
Score = 147 (56.8 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 82/456 (17%), Positives = 189/456 (41%)
Query: 22 IKEALEGNDVPAK----VDAMKKAIMLLLNGETL-----PQLFITIVRYVLPSEDHTIQK 72
++EA N+ P + + K + LL GE + F + R + S D T+++
Sbjct: 28 LQEARIFNETPINPRRCLHILTKILYLLNQGEHFGTTEATEAFFAMTR-LFQSNDQTLRR 86
Query: 73 LLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPL 132
+ YL I + + + ++I++ +L ++ + RG +R LCR+ + +++ +
Sbjct: 87 MC--YLTIKEMAN----ISEDVIIVTSSLTKDMTGKEDVYRGPAIRALCRITDGTMLQAI 140
Query: 133 IPSVLQNLQHRHPYIRRNAILAVMAIYKLPQG--EQLLVDAPEMIEKVLSTEQDPSAKRN 190
+ Q + + P + +A+++ + + K+ ++ + +A E ++ + + +
Sbjct: 141 ERYMKQAIVDKVPSVSSSALVSSLHMMKISYDVVKRWINEAQEA-----ASSDNIMVQYH 195
Query: 191 AFLMLFTCDQ-DR-AINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXX-XXXXX 247
A +L+ + DR A++ +L + + +++ + K+ + +
Sbjct: 196 ALGLLYHLRKNDRLAVSKMLNKFTKSGLKSQFAYCMLIRIASKLLKESEEGHESPLFDFI 255
Query: 248 XSLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLDRLNELR 307
S L VIYE A ++ L + A A + QL S ++ + LN++
Sbjct: 256 ESCLRNKHEMVIYEAASAIIHLPNCTARELAPAVSVLQLFCSSPKPVLRYAAVRTLNKVA 315
Query: 308 SSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQSGE 367
H + +D+ + N I + +L+ + +++
Sbjct: 316 MKHPSAVTACNLDLENLITDSNRSIATLAITTLLKTGSESSVDRLMKQISSFVS------ 369
Query: 368 LEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSN----VASAIDVIIFVREII 423
E + E++ +++QAI + K+P S ++ L + L D + +D II II
Sbjct: 370 -EISDEFKVVVVQAISALCQKYPRKHSVMMTFLSNMLRDDGGFEYKRAIVDCII---SII 425
Query: 424 EMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGE 459
E NP+ + S + L + + T L ++G+
Sbjct: 426 EENPESKESGLAHLCEFIEDCEHTVLATKILHLLGK 461
>TAIR|locus:2008129 [details] [associations]
symbol:delta-ADR "AT1G48760" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006886 "intracellular protein
transport" evidence=IEA;IMP] [GO:0008565 "protein transporter
activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030276 "clathrin binding" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007032 "endosome
organization" evidence=IMP] [GO:0080171 "lytic vacuole
organization" evidence=IMP] [GO:1990019 "protein storage vacuole
organization" evidence=IMP] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=RCA] [GO:0006944 "cellular
membrane fusion" evidence=RCA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR017105 Pfam:PF01602
PIRSF:PIRSF037092 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0006886 GO:GO:0000139 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 PROSITE:PS50077 GO:GO:0030117 GO:GO:0016192
GO:GO:0008565 GO:GO:0007032 EMBL:AC073555 KO:K12396 EMBL:AY056123
IPI:IPI00537735 RefSeq:NP_001031156.1 RefSeq:NP_175308.1
RefSeq:NP_849785.1 UniGene:At.56703 UniGene:At.75142
ProteinModelPortal:Q9C744 STRING:Q9C744 PaxDb:Q9C744 PRIDE:Q9C744
EnsemblPlants:AT1G48760.1 EnsemblPlants:AT1G48760.2
EnsemblPlants:AT1G48760.3 GeneID:841298 KEGG:ath:AT1G48760
TAIR:At1g48760 eggNOG:NOG285451 HOGENOM:HOG000110366
InParanoid:Q9C744 OMA:VVEICRV PhylomeDB:Q9C744
ProtClustDB:CLSN2682442 Genevestigator:Q9C744 GO:GO:0080171
GO:GO:1990019 Uniprot:Q9C744
Length = 869
Score = 151 (58.2 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 69/338 (20%), Positives = 148/338 (43%)
Query: 21 EIKEALEGNDVPAKVDAMKK-AIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLE 79
EI+ ++ D+ K A+ K + + L+G + V V S Q + Y
Sbjct: 41 EIRREIKATDLSTKSTALHKLSYLAALHGVDMSWAAFHAVEVVSSSR---FQHKRIGYQA 97
Query: 80 IIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
I + + V M+LI +R +L NEY + L L R+ ++ L P V
Sbjct: 98 ITQSFNDQTSV---MLLITNQVRKDLNSANEYEVSLALECLSRIGTHDLARDLTPEVFTL 154
Query: 140 LQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLSTE-QDPSAKRNAFLMLFTC 198
L ++++ AI V+ +++ + + V ++E + +++ Q SA F L T
Sbjct: 155 LGSSKSFVKKKAIGVVLRVFE-KYHDAVKVCFKRLVENLETSDPQILSAVVGVFCELATK 213
Query: 199 DQDRAI----NYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXXXXXS-LLNA 253
D + + VD + W L++ VL++ K+ +
Sbjct: 214 DPQSCLPLAPEFYKVLVDSRNNW-VLIK--VLKIFAKLALIEPRLGKKVAEPICEHMRRT 270
Query: 254 PSTAVIYECAGTLVS-LSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLDRLNELRSSHRD 312
+ ++++EC T+VS LS A++ A + L+ + D N+K + L+ L+ + H
Sbjct: 271 VAKSLVFECVRTVVSSLSDNEAAVKLAVAKIREFLV-EDDPNLKYLGLNALSIVAPKHLW 329
Query: 313 IMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNIN 350
+++ V++A++ + +++ + L +++ ++ N++
Sbjct: 330 AVLENKEVVVKAMSDEDPNVKLEALHLLMAMVNEDNVS 367
Score = 47 (21.6 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 18/76 (23%), Positives = 40/76 (52%)
Query: 373 EYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVREIIEMNP----K 428
E ++++++A+ + P V +HLLM + + NV S I I+ + ++ +P +
Sbjct: 333 ENKEVVVKAMSD---EDPNVKLEALHLLMAMVNEDNV-SEISRIL-MNYALKSDPLFCNE 387
Query: 429 LRVSIITRLLDNFYQI 444
+ S+++ N Y+I
Sbjct: 388 IIFSVLSACSRNAYEI 403
Score = 42 (19.8 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 8/32 (25%), Positives = 20/32 (62%)
Query: 574 EEVQPSRVEVNKASSQALLIMVSMLQLGQSPV 605
+E + VN + +++L +V++++LG P+
Sbjct: 538 QESSSGSLLVNVFTHESILSLVNVIELGLGPL 569
>ZFIN|ZDB-GENE-000208-8 [details] [associations]
symbol:copg2 "coatomer protein complex, subunit gamma
2" species:7955 "Danio rerio" [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0005798
"Golgi-associated vesicle" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR009028 InterPro:IPR013040 InterPro:IPR014863
InterPro:IPR015873 InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752
InterPro:IPR013041 ZFIN:ZDB-GENE-000208-8 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0016192 GO:GO:0005198 SUPFAM:SSF55711
SUPFAM:SSF49348 Gene3D:3.30.310.30 GO:GO:0030126 eggNOG:COG5240
GeneTree:ENSGT00390000016313 HOGENOM:HOG000184434
HOVERGEN:HBG004368 OrthoDB:EOG4DZ1TM Gene3D:2.60.40.1480
InterPro:IPR017106 PANTHER:PTHR10261 PIRSF:PIRSF037093 CTD:26958
EMBL:AF191561 EMBL:AF191562 EMBL:CR749763 EMBL:BX004864
EMBL:BC045918 EMBL:BC096860 IPI:IPI00495942 IPI:IPI00898490
RefSeq:NP_571069.1 UniGene:Dr.75573 HSSP:Q9Y678
ProteinModelPortal:Q9PUE4 SMR:Q9PUE4 STRING:Q9PUE4 PRIDE:Q9PUE4
Ensembl:ENSDART00000043660 GeneID:30187 KEGG:dre:30187
InParanoid:Q7ZVC5 NextBio:20806653 Bgee:Q9PUE4 Uniprot:Q9PUE4
Length = 873
Score = 150 (57.9 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 83/456 (18%), Positives = 188/456 (41%)
Query: 22 IKEALEGNDVPAK----VDAMKKAIMLLLNGETL-----PQLFITIVRYVLPSEDHTIQK 72
++EA N+ P + + K I LL GE + F + R + S D T+++
Sbjct: 28 LQEARIFNETPINPRRCLHILTKIIYLLNQGEHFGTTEATEAFFAMTR-LFQSNDQTLRR 86
Query: 73 LLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPL 132
+ YL I + + + ++I++ +L ++ + RG +R LCR+ +T +++ +
Sbjct: 87 MC--YLTIKEMAN----ISEDVIIVTSSLTKDMTGKEDVYRGPAIRALCRITDTTMLQAI 140
Query: 133 IPSVLQNLQHRHPYIRRNAILAVMAIYKLPQG--EQLLVDAPEMIEKVLSTEQDPSAKRN 190
+ Q + + P + +A+++ + + K+ ++ + +A E ++ + + +
Sbjct: 141 ERYMKQAIVDKVPSVSSSALVSSLHMVKMSFDVVKRWVNEAQEA-----ASSDNIMVQYH 195
Query: 191 AFLMLFTCDQ-DR-AINYLLTHVDRVSEWGELLQMVVLELIRKVCR-TNXXXXXXXXXXX 247
A +L+ + DR A+ +L + +++ + K+ T
Sbjct: 196 ALGLLYHLRKNDRLAVTKMLNKFTKSGLKSPFAYCMMIRIASKLLEETEGGHDSPLFDFI 255
Query: 248 XSLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLDRLNELR 307
S L V+YE A +V + + A A + QL S ++ + LN++
Sbjct: 256 ESCLRNKHEMVVYEAASAIVHMPNCTARELAPAVSVLQLFCSSPKAALRYAAVRTLNKVA 315
Query: 308 SSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQSGE 367
H + +D+ + N I + +L+ + +++
Sbjct: 316 MKHPSAVTACNLDLENLITDSNRSIATLAITTLLKTGSESSVDRLMKQISSFVS------ 369
Query: 368 LEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSN----VASAIDVIIFVREII 423
E + E++ +++QAI + K+P S +++ L + L D + +D II II
Sbjct: 370 -EISDEFKVVVVQAISALCQKYPRKHSVMMNFLSNMLRDDGGFEYKRAIVDCII---SII 425
Query: 424 EMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGE 459
E NP+ + + + L + + T L ++G+
Sbjct: 426 EENPESKETGLAHLCEFIEDCEHTVLATKILHLLGK 461
Score = 41 (19.5 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 21/87 (24%), Positives = 40/87 (45%)
Query: 611 DNDSFDRIVVCIRLLCNTGDNIRKIWLQSCRQSFVKMLSEKQLRESEELKAKAQISHAQP 670
D+D +D V L D+I+K+ + ++ ++ E E EE A A +
Sbjct: 742 DDDGYDDEYVLEDLEVTVADHIQKVLKPNFAAAWDEVGDEC---EKEETFALATVRTL-- 796
Query: 671 DDLIDFYHLKSRKGMSQLELEDEVQDD 697
D+ ++ ++ S GM E D+V ++
Sbjct: 797 DEAVN--NIVSFLGMQPCERSDKVPEN 821
>UNIPROTKB|K7ERB2 [details] [associations]
symbol:AP2B1 "AP-2 complex subunit beta" species:9606 "Homo
sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR026739
Pfam:PF01602 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PANTHER:PTHR11134 EMBL:AC006237 HGNC:HGNC:563 EMBL:AC015911
EMBL:AC004134 Ensembl:ENST00000589774 Uniprot:K7ERB2
Length = 151
Score = 114 (45.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 35/142 (24%), Positives = 70/142 (49%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
E+K L + +A+KK I + G+ + LF +V + +++ ++KL+ LYL
Sbjct: 17 ELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVN-CMQTDNLELKKLVYLYL-- 73
Query: 81 IDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
AK + P+M ++ N + + PN IR + +R + + +I E L + +
Sbjct: 74 --MNYAKSQ--PDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKC 129
Query: 140 LQHRHPYIRRNAILAVMAIYKL 161
L+ PY+R+ A + V ++ +
Sbjct: 130 LKDEDPYVRKTAAVCVAKLHDI 151
>UNIPROTKB|E1BNA3 [details] [associations]
symbol:LOC536144 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR002553
InterPro:IPR011710 InterPro:IPR016024 Pfam:PF01602 Pfam:PF07718
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0005198 GeneTree:ENSGT00390000012618 KO:K12400
OMA:KYAPDNA GO:GO:0030126 InterPro:IPR017109 PANTHER:PTHR22780:SF6
PIRSF:PIRSF037097 EMBL:DAAA02029063 IPI:IPI00923849
RefSeq:XP_003586629.1 Ensembl:ENSBTAT00000061383 GeneID:536144
KEGG:bta:536144 Uniprot:E1BNA3
Length = 1138
Score = 84 (34.6 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 27/113 (23%), Positives = 57/113 (50%)
Query: 740 DIVLDV-TVINRTKETLQNLCLELATMGDLKLVERPQNY--TLAPESSKQIKANIKVSST 796
D +L V +V N++ L++ LE+A + K+ E+P + ES+K + ++++
Sbjct: 939 DCLLVVWSVFNKSGLELKSANLEMAPAENFKITEQPGCCLPVIEAESTKIFQYSVQMEKP 998
Query: 797 ET-GVIFGNIVYETSNVLERTVVVLNDIHIDIMDYISPAVCTDAAFRTMWAEF 848
T G + G I Y+ + +V + +++ ++D+I P + F +W F
Sbjct: 999 FTEGNLSGFITYQVMDT--HSVQLEFSVNLSLLDFIRPLKISTEDFGKLWLSF 1049
Score = 82 (33.9 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 22/93 (23%), Positives = 45/93 (48%)
Query: 257 AVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLDRLNELRSSHRDIMVD 316
A+++EC T+ S+ + AA + +LS N +K + L L + +
Sbjct: 315 AILFECVHTVYSIYPKSELLEKAAKCIGKFVLSPKIN-LKYLGLKALTYVIQQDPTQALQ 373
Query: 317 LIMDVLRALNSPNLDIRRKTLDIVLELITPRNI 349
M ++ L+ P+ I+R+TL+++ + +NI
Sbjct: 374 HQMTIIECLDHPDPIIKRETLELLYRITNAQNI 406
Score = 74 (31.1 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 18/66 (27%), Positives = 33/66 (50%)
Query: 94 MILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNLQHRHPYIRRNAIL 153
++L+ + +LQ N + L + ++ E+I ++P + LQH IRR A+L
Sbjct: 131 LLLLVNTVVKDLQSTNLVEVCMALTIVSQIFPREMIPAVLPLIEDKLQHSKEIIRRKAVL 190
Query: 154 AVMAIY 159
A+ Y
Sbjct: 191 ALYKFY 196
>UNIPROTKB|F1PHS7 [details] [associations]
symbol:COPG2 "Coatomer subunit gamma" species:9615 "Canis
lupus familiaris" [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
InterPro:IPR002553 InterPro:IPR013040 InterPro:IPR014863
InterPro:IPR015873 InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752
InterPro:IPR013041 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0005198 SUPFAM:SSF49348
Gene3D:3.30.310.30 GO:GO:0030126 GeneTree:ENSGT00390000016313
Gene3D:2.60.40.1480 InterPro:IPR017106 PANTHER:PTHR10261
PIRSF:PIRSF037093 OMA:SEEGHES EMBL:AAEX03009252 EMBL:AAEX03009250
EMBL:AAEX03009251 Ensembl:ENSCAFT00000002234 Uniprot:F1PHS7
Length = 1010
Score = 140 (54.3 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 81/456 (17%), Positives = 190/456 (41%)
Query: 22 IKEALEGNDVPAK----VDAMKKAIMLLLNGE---TLP--QLFITIVRYVLPSEDHTIQK 72
++EA N+ P + + K + LL GE T+ + F + R + S D T+++
Sbjct: 149 LQEARIFNETPINPRRCLHILTKILYLLNQGEHFGTMEATEAFFAMTR-LFQSNDQTLRR 207
Query: 73 LLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPL 132
+ YL I + + ++I++ +L ++ + RG +R LCR+ + +++ +
Sbjct: 208 MC--YLTIKEMAT----ISEDVIIVTSSLTKDMTGKEDVYRGPAIRALCRITDGTMLQAI 261
Query: 133 IPSVLQNLQHRHPYIRRNAILAVMAIYKLPQG--EQLLVDAPEMIEKVLSTEQDPSAKRN 190
+ Q + + + +A+++ + + K+ ++ + +A E ++ + + +
Sbjct: 262 ERYMKQAIVDKVSSVSSSALVSSLHMMKISHDVVKRWVNEAQEA-----ASSDNIMVQYH 316
Query: 191 AFLMLFTCDQ-DR-AINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXX-XXXXX 247
A +L+ + DR A++ +L + S + +++ + ++ + N
Sbjct: 317 ALGVLYHLKKNDRLAVSKMLNKFTKSSLKSQFAYCMLIRIASRLLKENEEGHESPLFDFI 376
Query: 248 XSLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLDRLNELR 307
S L VIYE A ++ L + A A + QL S ++ + LN++
Sbjct: 377 ESCLRNKHEMVIYEAASAIIHLPNCTARELAPAVSVLQLFCSSPKPALRYAAVRTLNKVA 436
Query: 308 SSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQSGE 367
H + +D+ + N I + +L+ + +++
Sbjct: 437 MKHPSAVTACNLDLENLITDSNRSIATLAITTLLKTGSESSVDRLMKQISSFVS------ 490
Query: 368 LEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSN----VASAIDVIIFVREII 423
E + E++ +++QAI + K+P S ++ L + L D + +D II I+
Sbjct: 491 -EISDEFKVVVVQAISALCQKYPRKHSVMMTFLSNMLRDDGGFEYKRAIVDCII---SIV 546
Query: 424 EMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGE 459
E NP+ + + + L + + T L ++G+
Sbjct: 547 EENPEGKEAGLAHLCEFIEDCEHTVLATKILHLLGK 582
>UNIPROTKB|F1NB52 [details] [associations]
symbol:COPG "Coatomer subunit gamma" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR002553 InterPro:IPR009028
InterPro:IPR013040 InterPro:IPR014863 InterPro:IPR015873
InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041
GO:GO:0005634 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0005198 SUPFAM:SSF55711
SUPFAM:SSF49348 Gene3D:3.30.310.30 GO:GO:0030126
GeneTree:ENSGT00390000016313 Gene3D:2.60.40.1480 InterPro:IPR017106
PANTHER:PTHR10261 PIRSF:PIRSF037093 OMA:WDEVGEE EMBL:AADN02014051
EMBL:AADN02014052 IPI:IPI00571269 PRIDE:F1NB52
Ensembl:ENSGALT00000009434 Uniprot:F1NB52
Length = 874
Score = 139 (54.0 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 85/462 (18%), Positives = 187/462 (40%)
Query: 10 HFDKGTPAIANEIKEALEGNDVPAKVDAMKKAIMLLLN-GETL-----PQLFITIVRYVL 63
H +K A+ E + E P K + I+ L+N GE L + F + + +
Sbjct: 21 HLEKS--AVLQEARVFNETPINPRKCAHILTKILYLINQGEHLGVMEATESFFAMTK-LF 77
Query: 64 PSEDHTIQKLLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRL 123
S D T++++ YL I + + + ++I++ +L ++ ++ RG +R LC++
Sbjct: 78 QSNDPTLRRMC--YLTIKEMSS----IAEDVIIVTSSLTKDMTGKDDNYRGPAVRALCQI 131
Query: 124 NETEIIEPLIPSVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLSTEQ 183
++ +++ + + Q + + P + +A+ V +++ L ++ ++ S++
Sbjct: 132 TDSTMLQAIERYMKQAIVDKVPSVSSSAL--VSSLHLLKTSFDVVKRWVNEAQEAASSDN 189
Query: 184 DPSAKRNAFLMLFTCDQDR-AINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXX 242
L+ DR A+N +L+ R +++ + K+
Sbjct: 190 IMVQYHALGLLYHVRKNDRLAVNKMLSKFTRHGLKSPFAYCMMIRVASKLLEEEAGSRDS 249
Query: 243 -XXXXXXSLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLD 301
S L V+YE A +V+L + A A + QL S ++ +
Sbjct: 250 PLFDFIESCLRNKHEMVVYEAASAIVNLPNCTAKELAPAVSVLQLFCSSPKAALRYAAVR 309
Query: 302 RLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXX 361
LN++ H + +D+ + N I + +L+ + +I+
Sbjct: 310 TLNKVAMKHPSAVTACNLDLENLVTDSNRSIATLAITTLLKTGSESSIDRLMKQISSFMS 369
Query: 362 XTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFL---GDSNVASAI-DVII 417
E + E++ +++QAI++ K+P + +++ L L G AI D II
Sbjct: 370 -------EISDEFKVVVVQAINALCQKYPRKHAVLMNFLFTMLREEGGFEYKRAIVDCII 422
Query: 418 FVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGE 459
IIE N + + + ++ L + + T L ++G+
Sbjct: 423 ---SIIEENSESKETGLSHLCEFIEDCEFTVLATRILHLLGQ 461
>MGI|MGI:1328307 [details] [associations]
symbol:Ap1g2 "adaptor protein complex AP-1, gamma 2 subunit"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005768 "endosome" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005798 "Golgi-associated
vesicle" evidence=ISO] [GO:0005802 "trans-Golgi network"
evidence=TAS] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=TAS] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=ISO]
[GO:0016192 "vesicle-mediated transport" evidence=TAS] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030131 "clathrin adaptor
complex" evidence=IEA] [GO:0030133 "transport vesicle"
evidence=ISO] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR016024
InterPro:IPR017107 Pfam:PF01602 Pfam:PF02883 PIRSF:PIRSF037094
SMART:SM00809 InterPro:IPR013041 InterPro:IPR008153 MGI:MGI:1328307
GO:GO:0006886 GO:GO:0000139 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016020 GO:GO:0016192 GO:GO:0008565
GO:GO:0010008 GO:GO:0030659 GO:GO:0005798 GO:GO:0005802
EMBL:CH466535 GO:GO:0030133 GO:GO:0030131 SUPFAM:SSF49348
eggNOG:NOG303101 HOGENOM:HOG000210271 KO:K12391 Gene3D:2.60.40.1230
PANTHER:PTHR22780:SF5 PROSITE:PS50180 HOVERGEN:HBG067473
OrthoDB:EOG4ZGPBP GeneTree:ENSGT00390000012618 CTD:8906 OMA:PCAQLLH
EMBL:AF068707 EMBL:BC108374 IPI:IPI00131714 RefSeq:NP_031481.2
UniGene:Mm.238879 ProteinModelPortal:O88512 SMR:O88512
STRING:O88512 PhosphoSite:O88512 PaxDb:O88512 PRIDE:O88512
Ensembl:ENSMUST00000036041 Ensembl:ENSMUST00000170285 GeneID:11766
KEGG:mmu:11766 InParanoid:Q2YDV3 NextBio:279529 Bgee:O88512
CleanEx:MM_AP1G2 Genevestigator:O88512
GermOnline:ENSMUSG00000040701 Uniprot:O88512
Length = 791
Score = 98 (39.6 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 24/70 (34%), Positives = 39/70 (55%)
Query: 95 ILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNLQHRHPYIRRNAIL- 153
+LI +++N+L N+ ++G+ L L + E+ L P V + L PY+R+ AIL
Sbjct: 102 LLITNSIKNDLSQGNQPVQGLALCTLSTMGSAEMCRDLAPEVEKLLLQPSPYVRKKAILT 161
Query: 154 AVMAIYKLPQ 163
AV I K P+
Sbjct: 162 AVHMIRKDPE 171
Score = 91 (37.1 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 55/269 (20%), Positives = 102/269 (37%)
Query: 206 YLLTH-VDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXXXXXSLLNAPST------AV 258
Y H + VS+ LQ+ +L L+R + R + + T AV
Sbjct: 232 YSTEHSISGVSD--PFLQVQILRLLRILGRNHEESSETMNDLLAQVATNTDTSRNAGNAV 289
Query: 259 IYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLDRLNELRSSHRDIMVDLI 318
+ E T++++ SA A N + LL+ +D N++ + L L +L S +
Sbjct: 290 LLETVLTIMAIHSAAGLRVLAVNILGRFLLN-NDKNIRYVALTSLLQLVQSDHSAVQRHR 348
Query: 319 MDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQSGELEKNGEYRQML 378
V+ L + + R+ L++ L L+ N+ +S + + +
Sbjct: 349 STVVECLQETDASLSRRALELSLALVNSSNVRAMMQELQAFL---ESCPPDLRADCASGI 405
Query: 379 IQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVREIIEMNPKLRVSIITRLL 438
+ A A T++H+L ++V D + + ++I +L + RL
Sbjct: 406 LLAAERFAPSKRWHIDTILHVLTT--AGAHVRD--DAVANLTQLIGEAEELHTYSVRRLY 461
Query: 439 DNFYQ-IRAARVCTCALWIIGEYCQSLSE 466
+ I + A W IGEY L E
Sbjct: 462 SALAEDISQQPLVQVAAWCIGEYGDLLLE 490
>MGI|MGI:1336993 [details] [associations]
symbol:Ap4e1 "adaptor-related protein complex AP-4, epsilon
1" species:10090 "Mus musculus" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005802 "trans-Golgi network" evidence=TAS] [GO:0006810
"transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=TAS] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=TAS] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=IEA] InterPro:IPR002553
InterPro:IPR011710 InterPro:IPR016024 Pfam:PF01602 Pfam:PF07718
MGI:MGI:1336993 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0005198 GO:GO:0005802
eggNOG:NOG303101 GeneTree:ENSGT00390000012618 CTD:23431
HOGENOM:HOG000231886 HOVERGEN:HBG050522 KO:K12400 OMA:KYAPDNA
OrthoDB:EOG4QFWCJ GO:GO:0030126 InterPro:IPR017109
PANTHER:PTHR22780:SF6 PIRSF:PIRSF037097 EMBL:AK144636 EMBL:AL928836
EMBL:AL928590 EMBL:BC042530 IPI:IPI00667233 RefSeq:NP_780759.2
UniGene:Mm.134045 ProteinModelPortal:Q80V94 SMR:Q80V94
STRING:Q80V94 PhosphoSite:Q80V94 PaxDb:Q80V94 PRIDE:Q80V94
DNASU:108011 Ensembl:ENSMUST00000002063 GeneID:108011
KEGG:mmu:108011 InParanoid:A2ASB4 NextBio:359873 Bgee:Q80V94
CleanEx:MM_AP4E1 Genevestigator:Q80V94
GermOnline:ENSMUSG00000001998 Uniprot:Q80V94
Length = 1122
Score = 84 (34.6 bits), Expect = 2.8e-05, Sum P(3) = 2.8e-05
Identities = 20/93 (21%), Positives = 46/93 (49%)
Query: 257 AVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLDRLNELRSSHRDIMVD 316
A+++EC T+ S+ + AA + +LS N +K + L L + + +
Sbjct: 314 AILFECVHTIYSIYPKSELLEKAAKCIGKFVLSPKIN-LKYLGLKALTYVIQQDPSLALQ 372
Query: 317 LIMDVLRALNSPNLDIRRKTLDIVLELITPRNI 349
+ ++ L+ P+ I+R+TL+++ + +N+
Sbjct: 373 HQITIIECLDHPDPIIKRETLELLYRITNAQNV 405
Score = 80 (33.2 bits), Expect = 2.8e-05, Sum P(3) = 2.8e-05
Identities = 30/157 (19%), Positives = 76/157 (48%)
Query: 706 VKEGDDANKLNRILQLTGFSDPVYAEAYVTVHHYDIVLDV-TVINRTKETLQNLCLELAT 764
VKE + + ++++ ++ V +Y V D +L + V ++T + LE+
Sbjct: 891 VKEETPECRHSGLVEICS-NEAVSVSSY-KVWRDDCLLVIWAVTSKTDSEFTDAQLEIFP 948
Query: 765 MGDLKLVERPQ--NYTLAPESSKQIKANIKVSST-ETGVIFGNIVYETSNVLERTVVVLN 821
+ + K++E+P+ + + E +K + ++++ S G + G I Y+ + +V +
Sbjct: 949 VENFKIIEQPECSSPVIETERTKSFQYSVQMESPCIEGTLSGFIKYQMMDT--HSVQLEF 1006
Query: 822 DIHIDIMDYISPAVCTDAAFRTMWAEFEWENKVSLAL 858
+++ ++D+I P + F +W F + K ++ +
Sbjct: 1007 SMNLPLLDFIRPLKISTEDFGKLWLSFANDVKQTIKI 1043
Score = 73 (30.8 bits), Expect = 2.8e-05, Sum P(3) = 2.8e-05
Identities = 18/66 (27%), Positives = 33/66 (50%)
Query: 94 MILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNLQHRHPYIRRNAIL 153
++L+ + +LQ N + L + ++ E+I ++P + LQH IRR A+L
Sbjct: 130 LLLLVNTVVKDLQSTNLVEVCMALTVVSQIFPREMIPAVLPLIEDKLQHSKEIIRRKAVL 189
Query: 154 AVMAIY 159
A+ Y
Sbjct: 190 ALYKFY 195
>UNIPROTKB|F1SNE9 [details] [associations]
symbol:COPG2 "Coatomer subunit gamma" species:9823 "Sus
scrofa" [GO:0016192 "vesicle-mediated transport" evidence=IEA]
[GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR002553
InterPro:IPR013040 InterPro:IPR014863 InterPro:IPR015873
InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0005198 SUPFAM:SSF49348 Gene3D:3.30.310.30
GO:GO:0030126 GeneTree:ENSGT00390000016313 Gene3D:2.60.40.1480
InterPro:IPR017106 PANTHER:PTHR10261 PIRSF:PIRSF037093 OMA:SEEGHES
EMBL:CU915599 EMBL:FP236769 Ensembl:ENSSSCT00000018023
Uniprot:F1SNE9
Length = 871
Score = 136 (52.9 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 79/456 (17%), Positives = 187/456 (41%)
Query: 22 IKEALEGNDVPAK----VDAMKKAIMLLLNGETL-----PQLFITIVRYVLPSEDHTIQK 72
++EA N+ P + + K + LL GE + F + R + S D T+++
Sbjct: 28 LQEARIFNETPINPRRCLHILTKILYLLNQGEYFGTTEATEAFFAMTR-LFQSNDQTLRR 86
Query: 73 LLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPL 132
+ YL I + + ++I++ +L ++ + RG +R LCR+ + +++ +
Sbjct: 87 MC--YLTIKEMAT----ISEDVIIVTSSLTKDMTGKEDVYRGPAIRALCRITDGTMLQAI 140
Query: 133 IPSVLQNLQHRHPYIRRNAILAVMAIYKLPQG--EQLLVDAPEMIEKVLSTEQDPSAKRN 190
+ Q + + + +A+++ + + K+ ++ + +A E ++ + + +
Sbjct: 141 ERYMKQAIVDKVSSVSSSALVSSLHMMKISYDVVKRWVNEAQEA-----ASSDNIMVQYH 195
Query: 191 AFLMLFTCDQ-DR-AINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXX-XXXXX 247
A +L+ + DR A++ +L + + +++ + ++ + N
Sbjct: 196 ALGVLYHLKKNDRLAVSKMLNKFTKCGLKSQFAYCMLIRIASRLLKENEEGHESPVFDFI 255
Query: 248 XSLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLDRLNELR 307
S L VIYE A ++ L + A A + QL S ++ + LN++
Sbjct: 256 ESCLRNKHEMVIYEAASAIIHLPNCSARELAPAVSVLQLFCSSPKPALRYAAVRTLNKVA 315
Query: 308 SSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQSGE 367
H + +D+ + N I + +L+ + +++
Sbjct: 316 MKHPSAVTACNLDLENLITDSNRSIATLAITTLLKTGSESSVDRLMKQISSFVS------ 369
Query: 368 LEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSN----VASAIDVIIFVREII 423
E + E++ +++QAI + K+P S ++ L + L D + +D II I+
Sbjct: 370 -EISDEFKVVVVQAISALCQKYPRKHSVMMTFLSNMLRDDGGFEYKRAIVDCII---NIV 425
Query: 424 EMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGE 459
E NP+ + + + L + + T L ++G+
Sbjct: 426 EENPESKEAGLAHLCEFIEDCEHTVLATKILHLLGK 461
>UNIPROTKB|I3LM40 [details] [associations]
symbol:AP4E1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR002553
InterPro:IPR011710 InterPro:IPR016024 Pfam:PF01602 Pfam:PF07718
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0005198 GeneTree:ENSGT00390000012618
GO:GO:0030126 InterPro:IPR017109 PANTHER:PTHR22780:SF6
PIRSF:PIRSF037097 EMBL:CU407241 EMBL:CU915459
Ensembl:ENSSSCT00000025088 Uniprot:I3LM40
Length = 1131
Score = 87 (35.7 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 22/93 (23%), Positives = 46/93 (49%)
Query: 257 AVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLDRLNELRSSHRDIMVD 316
A+++EC T+ S+ + AA + +LS N +K + L L + + +
Sbjct: 315 AILFECVHTVYSIYPKSELLEKAAKCIGKFVLSPKIN-LKYLGLKALTYVIQQDPTLALQ 373
Query: 317 LIMDVLRALNSPNLDIRRKTLDIVLELITPRNI 349
M ++ L+ P+ I+R+TL+++ + +NI
Sbjct: 374 HQMTIIECLDHPDPIIKRETLELLYRITNAQNI 406
Score = 79 (32.9 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 27/128 (21%), Positives = 61/128 (47%)
Query: 725 SDPVYAEAYVTVHHYDIVLDV-TVINRTKETLQNLCLELATMGDLKLVERPQNY--TLAP 781
+D + ++ + D +L V +V N++ L++ LE+A + K+ E+P +
Sbjct: 916 NDETVSVSFYKIWQDDCLLLVWSVFNKSGLELKSANLEIAPAENFKITEQPGCCLPVIEA 975
Query: 782 ESSKQIKANIKVSSTET-GVIFGNIVYETSNVLERTVVVLNDIHIDIMDYISPAVCTDAA 840
ES+K + ++++ G + G I Y+ + +V + + + ++D+I P +
Sbjct: 976 ESTKNFQYSMQMEKPFIEGTLSGFINYQVMDT--HSVQLEFSVTLSLLDFIRPLKISTED 1033
Query: 841 FRTMWAEF 848
F +W F
Sbjct: 1034 FGKLWLSF 1041
Score = 69 (29.3 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 17/62 (27%), Positives = 32/62 (51%)
Query: 94 MILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNLQHRHPYIRRNAIL 153
++L+ + +LQ N + L + ++ E+I ++P + LQH IRR A+L
Sbjct: 131 LLLLVNTVVKDLQSTNLVEVCMALTIVSQIFPREMIPAVLPLIEDKLQHSKEIIRRKAVL 190
Query: 154 AV 155
A+
Sbjct: 191 AL 192
>ZFIN|ZDB-GENE-040426-1284 [details] [associations]
symbol:ap4b1 "adaptor-related protein complex 4,
beta 1 subunit" species:7955 "Danio rerio" [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0030117 "membrane coat"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
InterPro:IPR002553 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM01020 ZFIN:ZDB-GENE-040426-1284
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 eggNOG:COG5096 GO:GO:0030131
PANTHER:PTHR11134 CTD:10717 HOGENOM:HOG000294128 HOVERGEN:HBG050521
KO:K12401 OrthoDB:EOG48KR9Z EMBL:BC053128 IPI:IPI00488851
RefSeq:NP_956632.1 UniGene:Dr.80194 ProteinModelPortal:Q7T3G3
STRING:Q7T3G3 PRIDE:Q7T3G3 GeneID:393309 KEGG:dre:393309
NextBio:20814361 ArrayExpress:Q7T3G3 Bgee:Q7T3G3 Uniprot:Q7T3G3
Length = 729
Score = 135 (52.6 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 96/468 (20%), Positives = 185/468 (39%)
Query: 14 GTPAIANEIKEALEGNDVPAKVDAMK----KAIMLLLNGETLPQLFITIVRYVLPSEDHT 69
G+ E+K AL +V A K K I + G + LF+ +V+ + D
Sbjct: 5 GSEETVKELKRALSNPNVQADRLRYKSYITKVIRYMTQGLDVSALFMDMVK-ASATVDIV 63
Query: 70 IQKLLLLYLEIIDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEI 128
+KL+ LY+ T A + P++ L+ N LR + PN +RG+ LR +C +
Sbjct: 64 QKKLVYLYM----CTYASDK--PDLALLAINTLRKDCADPNPMVRGLALRNMCNFRMPGM 117
Query: 129 IEPLIPSVLQNLQHRHPYIRRNAILAVMAIYKL-PQGEQLLVDAPEMIEK-VLSTEQDPS 186
E + ++ L+ + Y+RR A+L ++ L P+ E +D + E L + DP
Sbjct: 118 TEYIEQPIVAGLRDKASYVRRVAVLGCAKMHSLQPRTE---IDGSLVNELYALLRDPDPV 174
Query: 187 AKRNAFLMLFTCDQDRA---INYLLTH--VDRVSEWGELLQMVVLELIRKVCRTNXXXXX 241
N L +D IN + H ++R+ + Q VL + + N
Sbjct: 175 VVVNCLRALEDILKDEGGVVINKPIAHHLLNRLKDLDCWAQSEVLTFLLRYRPRNDDELF 234
Query: 242 XXXXXXXSLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQL-LLSQ---SDNNVKL 297
L + + V + L++A A++A A S LL+ + ++
Sbjct: 235 DILSLLDPFLQSSQSHVAISTLRLFLHLAAAHPAVQADALLCSSAPLLATCGAASRELRF 294
Query: 298 IVLDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXX 357
L + ++ S + + P+ I+ + ++I++ L+ N+
Sbjct: 295 AGLCHIQQVMRSQPALFNTHYKRFFCGYSEPSY-IKFRKMEILVALVNDENV-------A 346
Query: 358 XXXXXTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVII 417
+S + + E Q I AI + E ++ L+ D ++ SA VI
Sbjct: 347 LVLEEMKSYCTDVSAELAQAAIAAIGRIGRTYSEKCLDILTGLLALKQD-HITSA--VIQ 403
Query: 418 FVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLS 465
R+++ P+ ++ + + + LW++GE+ +S
Sbjct: 404 TFRDLVWFCPQCTAAVCLTVESCVDYPQDSEGKQALLWLLGEHADQIS 451
Score = 48 (22.0 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 18/85 (21%), Positives = 36/85 (42%)
Query: 778 TLAPESSKQIKA-NIKVSSTETGVIFGNIVYETSNVLERTVVVLNDIHIDIMDYISPAVC 836
TL P S+ ++ N +S++E + +T + E V + D+ + + A
Sbjct: 562 TLGPLSAADLQLHNTALSASE----HTDDTADTELLTEHVPVSMRDVSEAGVSLCAGAAV 617
Query: 837 TDAAFRTMWAEFEWENKVSLALVSC 861
+ AF MW + E + ++ C
Sbjct: 618 SPEAFEQMWQQLEVLQRQTVCFSGC 642
>UNIPROTKB|F1RYM9 [details] [associations]
symbol:AP4E1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR002553
InterPro:IPR011710 InterPro:IPR016024 Pfam:PF01602 Pfam:PF07718
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0005198 GeneTree:ENSGT00390000012618
OMA:KYAPDNA GO:GO:0030126 InterPro:IPR017109 PANTHER:PTHR22780:SF6
PIRSF:PIRSF037097 EMBL:CU407241 EMBL:CU915459
Ensembl:ENSSSCT00000005118 Uniprot:F1RYM9
Length = 1139
Score = 87 (35.7 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 22/93 (23%), Positives = 46/93 (49%)
Query: 257 AVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLDRLNELRSSHRDIMVD 316
A+++EC T+ S+ + AA + +LS N +K + L L + + +
Sbjct: 315 AILFECVHTVYSIYPKSELLEKAAKCIGKFVLSPKIN-LKYLGLKALTYVIQQDPTLALQ 373
Query: 317 LIMDVLRALNSPNLDIRRKTLDIVLELITPRNI 349
M ++ L+ P+ I+R+TL+++ + +NI
Sbjct: 374 HQMTIIECLDHPDPIIKRETLELLYRITNAQNI 406
Score = 79 (32.9 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 27/128 (21%), Positives = 61/128 (47%)
Query: 725 SDPVYAEAYVTVHHYDIVLDV-TVINRTKETLQNLCLELATMGDLKLVERPQNY--TLAP 781
+D + ++ + D +L V +V N++ L++ LE+A + K+ E+P +
Sbjct: 924 NDETVSVSFYKIWQDDCLLLVWSVFNKSGLELKSANLEIAPAENFKITEQPGCCLPVIEA 983
Query: 782 ESSKQIKANIKVSSTET-GVIFGNIVYETSNVLERTVVVLNDIHIDIMDYISPAVCTDAA 840
ES+K + ++++ G + G I Y+ + +V + + + ++D+I P +
Sbjct: 984 ESTKNFQYSMQMEKPFIEGTLSGFINYQVMDT--HSVQLEFSVTLSLLDFIRPLKISTED 1041
Query: 841 FRTMWAEF 848
F +W F
Sbjct: 1042 FGKLWLSF 1049
Score = 69 (29.3 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 17/62 (27%), Positives = 32/62 (51%)
Query: 94 MILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNLQHRHPYIRRNAIL 153
++L+ + +LQ N + L + ++ E+I ++P + LQH IRR A+L
Sbjct: 131 LLLLVNTVVKDLQSTNLVEVCMALTIVSQIFPREMIPAVLPLIEDKLQHSKEIIRRKAVL 190
Query: 154 AV 155
A+
Sbjct: 191 AL 192
>UNIPROTKB|A2VE21 [details] [associations]
symbol:COPG2 "Coatomer subunit gamma-2" species:9913 "Bos
taurus" [GO:0016192 "vesicle-mediated transport" evidence=IEA]
[GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR002553
InterPro:IPR013040 InterPro:IPR014863 InterPro:IPR015873
InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0016192 GO:GO:0005198 SUPFAM:SSF49348
Gene3D:3.30.310.30 GO:GO:0030126 eggNOG:COG5240
GeneTree:ENSGT00390000016313 HOGENOM:HOG000184434
HOVERGEN:HBG004368 OrthoDB:EOG4DZ1TM Gene3D:2.60.40.1480
InterPro:IPR017106 PANTHER:PTHR10261 PIRSF:PIRSF037093
EMBL:BC133529 IPI:IPI00688869 RefSeq:NP_001075917.1
UniGene:Bt.22540 ProteinModelPortal:A2VE21 SMR:A2VE21 STRING:A2VE21
PRIDE:A2VE21 Ensembl:ENSBTAT00000022911 GeneID:536616
KEGG:bta:536616 CTD:26958 InParanoid:A2VE21 OMA:SEEGHES
NextBio:20876980 Uniprot:A2VE21
Length = 871
Score = 135 (52.6 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 79/456 (17%), Positives = 187/456 (41%)
Query: 22 IKEALEGNDVPAK----VDAMKKAIMLLLNGETL-----PQLFITIVRYVLPSEDHTIQK 72
++EA N+ P + + K + LL GE + F + R + S D T+++
Sbjct: 28 LQEARIFNETPINPRRCLHILTKILYLLNQGEHFGTTEATEAFFAMTR-LFQSNDQTLRR 86
Query: 73 LLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPL 132
+ YL I + + ++I++ +L ++ + RG +R LCR+ + +++ +
Sbjct: 87 MC--YLTIKEMAT----ISEDVIIVTSSLTKDMTGKEDVYRGPAIRALCRITDGTMLQAI 140
Query: 133 IPSVLQNLQHRHPYIRRNAILAVMAIYKLPQG--EQLLVDAPEMIEKVLSTEQDPSAKRN 190
+ Q + + + +A+++ + + K+ ++ + +A E ++ + + +
Sbjct: 141 ERYMKQAIVDKVSSVSSSALVSSLHMMKISYDVVKRWVNEAQEA-----ASSDNIMVQYH 195
Query: 191 AFLMLFTCDQ-DR-AINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXX-XXXXX 247
A +L+ + DR A++ +L + + +++ + ++ + N
Sbjct: 196 ALGVLYHLKKNDRLAVSKMLNKFTKSGLKSQFAYCMLIRIASRLLKENEEGHESPVFDFI 255
Query: 248 XSLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLDRLNELR 307
S L VIYE A ++ L + A A + QL S ++ + LN++
Sbjct: 256 ESCLRNKHEMVIYEAASAIIHLPNCTARELAPAVSVLQLFCSSPKPALRYAAVRTLNKVA 315
Query: 308 SSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQSGE 367
H + +D+ + N I + +L+ + +++
Sbjct: 316 MKHPSAVTACNLDLENLITDSNRSIATLAITTLLKTGSESSVDRLMKQISSFVS------ 369
Query: 368 LEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSN----VASAIDVIIFVREII 423
E + E++ +++QAI + K+P S ++ L + L D + +D II I+
Sbjct: 370 -EISDEFKVVVVQAISALCQKYPRKHSVMMTFLSNMLRDDGGFEYKRAIVDCII---HIV 425
Query: 424 EMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGE 459
E NP+ + + + L + + T L ++G+
Sbjct: 426 EENPESKEAGLAHLCEFIEDCEHTVLATKILHLLGK 461
>UNIPROTKB|E2RJS0 [details] [associations]
symbol:AP4E1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR002553
InterPro:IPR011710 InterPro:IPR016024 Pfam:PF01602 Pfam:PF07718
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0005198 GeneTree:ENSGT00390000012618
OMA:KYAPDNA GO:GO:0030126 InterPro:IPR017109 PANTHER:PTHR22780:SF6
PIRSF:PIRSF037097 EMBL:AAEX03016123 Ensembl:ENSCAFT00000024322
Uniprot:E2RJS0
Length = 1125
Score = 87 (35.7 bits), Expect = 5.5e-05, Sum P(3) = 5.5e-05
Identities = 22/93 (23%), Positives = 46/93 (49%)
Query: 257 AVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLDRLNELRSSHRDIMVD 316
A+++EC T+ S+ + AA + +LS N +K + L L + + +
Sbjct: 302 AILFECVHTVYSIYPKSELLEKAAKCIGKFVLSPKIN-LKYLGLKALTYVIQQDPTLALQ 360
Query: 317 LIMDVLRALNSPNLDIRRKTLDIVLELITPRNI 349
M ++ L+ P+ I+R+TL+++ + +NI
Sbjct: 361 HQMTIIECLDHPDPIIKRETLELLYRITNAQNI 393
Score = 78 (32.5 bits), Expect = 5.5e-05, Sum P(3) = 5.5e-05
Identities = 28/113 (24%), Positives = 55/113 (48%)
Query: 740 DIVLDV-TVINRTKETLQNLCLELATMGDLKLVERPQNY--TLAPESSKQIKANIKVSST 796
D +L V +V N++ L++ LE+A K+ E+P + ES K + N+++
Sbjct: 926 DCLLMVWSVSNKSGLELKSANLEIAPAEYFKITEQPGCCLPVIEAESIKTFQYNVQMEKP 985
Query: 797 ET-GVIFGNIVYETSNVLERTVVVLNDIHIDIMDYISPAVCTDAAFRTMWAEF 848
T G + G I Y+ + +V + +++ ++D+I P + F +W F
Sbjct: 986 FTDGNLTGFINYQMMDT--HSVQLEFSVNLSLLDFIRPLKISTENFGKLWLSF 1036
Score = 69 (29.3 bits), Expect = 5.5e-05, Sum P(3) = 5.5e-05
Identities = 17/62 (27%), Positives = 32/62 (51%)
Query: 94 MILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNLQHRHPYIRRNAIL 153
++L+ + +LQ N + L + ++ E+I ++P + LQH IRR A+L
Sbjct: 118 LLLLVNTVVKDLQSTNLVEVCMALTIVSQIFPREMIPAVLPLIEDKLQHSKEIIRRKAVL 177
Query: 154 AV 155
A+
Sbjct: 178 AL 179
>UNIPROTKB|Q9UBF2 [details] [associations]
symbol:COPG2 "Coatomer subunit gamma-2" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IDA]
[GO:0030126 "COPI vesicle coat" evidence=IDA] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=TAS]
InterPro:IPR002553 InterPro:IPR009028 InterPro:IPR013040
InterPro:IPR014863 InterPro:IPR015873 InterPro:IPR016024
Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0005198 GO:GO:0006891 EMBL:CH236950
EMBL:CH471070 SUPFAM:SSF55711 SUPFAM:SSF49348 Gene3D:3.30.310.30
GO:GO:0030126 GO:GO:0006890 EMBL:AC007938 eggNOG:COG5240
HOVERGEN:HBG004368 Gene3D:2.60.40.1480 InterPro:IPR017106
PANTHER:PTHR10261 PIRSF:PIRSF037093 CTD:26958 EMBL:AF207598
EMBL:AF157833 EMBL:AB047847 EMBL:AK291409 EMBL:AC090520
EMBL:AC009274 EMBL:BC017443 IPI:IPI00002557 RefSeq:NP_036265.3
UniGene:Hs.6421 ProteinModelPortal:Q9UBF2 SMR:Q9UBF2 IntAct:Q9UBF2
STRING:Q9UBF2 PhosphoSite:Q9UBF2 DMDM:13124090 PaxDb:Q9UBF2
PeptideAtlas:Q9UBF2 PRIDE:Q9UBF2 GeneID:26958 KEGG:hsa:26958
UCSC:uc003vqh.1 GeneCards:GC07M130146 H-InvDB:HIX0201202
HGNC:HGNC:2237 MIM:604355 neXtProt:NX_Q9UBF2 PharmGKB:PA26753
GenomeRNAi:26958 NextBio:49412 CleanEx:HS_COPG2
Genevestigator:Q9UBF2 Uniprot:Q9UBF2
Length = 871
Score = 134 (52.2 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 79/456 (17%), Positives = 187/456 (41%)
Query: 22 IKEALEGNDVPAK----VDAMKKAIMLLLNGETL-----PQLFITIVRYVLPSEDHTIQK 72
++EA N+ P + + K + LL GE + F + R + S D T+++
Sbjct: 28 LQEARIFNETPINPRRCLHILTKILYLLNQGEHFGTTEATEAFFAMTR-LFQSNDQTLRR 86
Query: 73 LLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPL 132
+ YL I + + ++I++ +L ++ + RG +R LCR+ + +++ +
Sbjct: 87 MC--YLTIKEMAT----ISEDVIIVTSSLTKDMTGKEDVYRGPAIRALCRITDGTMLQAI 140
Query: 133 IPSVLQNLQHRHPYIRRNAILAVMAIYKLPQG--EQLLVDAPEMIEKVLSTEQDPSAKRN 190
+ Q + + + +A+++ + + K+ ++ + +A E ++ + + +
Sbjct: 141 ERYMKQAIVDKVSSVSSSALVSSLHMMKISYDVVKRWINEAQEA-----ASSDNIMVQYH 195
Query: 191 AFLMLFTCDQ-DR-AINYLLTHVDRVSEWGELLQMVVLELIRKVCR-TNXXXXXXXXXXX 247
A +L+ + DR A++ +L + + +++ + ++ + T
Sbjct: 196 ALGVLYHLRKNDRLAVSKMLNKFTKSGLKSQFAYCMLIRIASRLLKETEDGHESPLFDFI 255
Query: 248 XSLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLDRLNELR 307
S L VIYE A ++ L + A A + QL S ++ + LN++
Sbjct: 256 ESCLRNKHEMVIYEAASAIIHLPNCTARELAPAVSVLQLFCSSPKPALRYAAVRTLNKVA 315
Query: 308 SSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQSGE 367
H + +D+ + N I + +L+ + +++
Sbjct: 316 MKHPSAVTACNLDLENLITDSNRSIATLAITTLLKTGSESSVDRLMKQISSFVS------ 369
Query: 368 LEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSN----VASAIDVIIFVREII 423
E + E++ +++QAI + K+P S ++ L + L D + +D II I+
Sbjct: 370 -EISDEFKVVVVQAISALCQKYPRKHSVMMTFLSNMLRDDGGFEYKRAIVDCII---SIV 425
Query: 424 EMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGE 459
E NP+ + + + L + + T L ++G+
Sbjct: 426 EENPESKEAGLAHLCEFIEDCEHTVLATKILHLLGK 461
>TAIR|locus:2099961 [details] [associations]
symbol:PAT2 "protein affected trafficking 2"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0030117 "membrane coat" evidence=IEA] [GO:0080171 "lytic
vacuole organization" evidence=IMP] [GO:0006896 "Golgi to vacuole
transport" evidence=IMP] [GO:0051453 "regulation of intracellular
pH" evidence=IMP] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR026739 InterPro:IPR026740 Pfam:PF01602
PIRSF:PIRSF037096 EMBL:CP002686 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
PANTHER:PTHR11134 KO:K12397 GO:GO:0030123 PANTHER:PTHR11134:SF1
GO:GO:0080171 IPI:IPI00938719 RefSeq:NP_974443.4 UniGene:At.26631
UniGene:At.35023 ProteinModelPortal:F4IWW1 SMR:F4IWW1 PRIDE:F4IWW1
EnsemblPlants:AT3G55480.2 GeneID:824714 KEGG:ath:AT3G55480
OMA:PVIVPIM Uniprot:F4IWW1
Length = 1115
Score = 111 (44.1 bits), Expect = 8.4e-05, Sum P(3) = 8.4e-05
Identities = 53/208 (25%), Positives = 92/208 (44%)
Query: 34 KVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEIIDKTDAKGRVLPE 93
K +A+K+ + L+ G + F +V+ V S+ ++KL+ LYL + + + E
Sbjct: 49 KCEALKRLLALIAQGFDVSNFFPQVVKNVA-SQSSEVKKLVYLYL--LQYAEKRPN---E 102
Query: 94 MILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNLQHRHP--YIRRNA 151
+L + +L PN +R LR + + +I PL + + R P Y+RR A
Sbjct: 103 ALLSINYFQKDLGDPNPLVRAWALRTMAGIR-LHVIAPLALAAVSKCA-RDPAVYVRRCA 160
Query: 152 ILAVMAIYKLPQGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLFT--CDQDRAI---NY 206
A+ ++ L E A E + +L + P A FT C + + NY
Sbjct: 161 ANALPKLHDLRLEEH--ASAIEELVGILLNDHSPGVV-GAAAAAFTSICPNNFKLIGKNY 217
Query: 207 --LLTHVDRVSEWGELLQMVVLELIRKV 232
L + V EWG++L ++ L+R V
Sbjct: 218 KKLCQILPDVEEWGQIL--LIGTLLRYV 243
Score = 73 (30.8 bits), Expect = 8.4e-05, Sum P(3) = 8.4e-05
Identities = 26/126 (20%), Positives = 52/126 (41%)
Query: 379 IQAIHSCAIKFPEVASTVVHLLM------DFLGDSNVASA-----IDVIIFVREIIEMNP 427
+ AI CA + + +T + L+ F GD A + ++ ++ +IE +P
Sbjct: 464 VAAIGLCAKRLMTIPTTCLDGLLALVRQESFAGDFESADGEAGVLVQAVMSIQTMIERDP 523
Query: 428 KLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCLGELPFFSVS 487
++ +L + I+ A +W++G YC + + TI + L +S
Sbjct: 524 LRHEKVLIQLFRSLDSIKVAAARATIIWMVGVYCSLGHIIPRMLTTITKYLA----WSFK 579
Query: 488 EEGEDT 493
E +T
Sbjct: 580 SEASET 585
Score = 47 (21.6 bits), Expect = 8.4e-05, Sum P(3) = 8.4e-05
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 741 IVLDVTVINRTKETLQNLCLEL---ATMGDLKLVERPQNYTLAPESS 784
+++ +TV + E L NL +++ T+ L L+ R N+ + P SS
Sbjct: 1068 LLITITVEGKCTEVL-NLTVKINCEETVFGLNLLNRIANFMVEPSSS 1113
>RGD|1566215 [details] [associations]
symbol:Copg2 "coatomer protein complex, subunit gamma 2"
species:10116 "Rattus norvegicus" [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
InterPro:IPR002553 InterPro:IPR016024 Pfam:PF01602 RGD:1566215
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0030117 GO:GO:0016192 GeneTree:ENSGT00390000016313
InterPro:IPR017106 PANTHER:PTHR10261 IPI:IPI00767794
Ensembl:ENSRNOT00000033706 UCSC:RGD:1566215 OrthoDB:EOG4CG093
ArrayExpress:D4ABY2 Uniprot:D4ABY2
Length = 490
Score = 128 (50.1 bits), Expect = 0.00013, P = 0.00013
Identities = 78/453 (17%), Positives = 186/453 (41%)
Query: 22 IKEALEGNDVPAK----VDAMKKAIMLLLNGE---TLP--QLFITIVRYVLPSEDHTIQK 72
++EA N+ P + + K + LL GE T+ + F + R + S D T+++
Sbjct: 28 LQEARIFNETPINPRRCLHILTKILYLLNQGEHFGTMEATEAFFAMTR-LFQSNDQTLRR 86
Query: 73 LLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPL 132
+ YL I + + ++I++ +L ++ + RG +R LCR+ + +++ +
Sbjct: 87 MC--YLTIKEMAT----ISEDVIIVTSSLTKDMTGKEDVYRGPAIRALCRITDGTMLQAI 140
Query: 133 IPSVLQNLQHRHPYIRRNAILAVMAIYKLPQG--EQLLVDAPEMIEKVLSTEQDPSAKRN 190
+ Q + + + +A+++ + + K+ ++ + +A E ++ + + +
Sbjct: 141 ERYMKQAIVDKVSSVSSSALVSSLHMMKISYDVVKRWINEAQEA-----ASSDNIMVQYH 195
Query: 191 AFLMLFTCDQ-DR-AINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXX-XXXXX 247
A +L+ + DR A++ +L + + +++ + ++ + +
Sbjct: 196 ALGVLYHLRKNDRLAVSKMLNKFTKSGLKSQFAYCMLIRIASRLLKESEDGHESPLFDFI 255
Query: 248 XSLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLDRLNELR 307
S L VIYE A ++ L + A A + QL S ++ + LN++
Sbjct: 256 ESCLRNKHEMVIYEAASAIIHLPNCTARELAPAVSVLQLFCSSPKPALRYAAVRTLNKVA 315
Query: 308 SSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQSGE 367
H + +D+ + N I + +L+ + +++ S E
Sbjct: 316 MKHPSAVTACNLDLENLITDSNRSIATLAITTLLKTGSESSVDRLMKQISSFVSEI-SDE 374
Query: 368 LEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVII-FVREIIEMN 426
+ +G ++QAI + K+P S ++ L + L D I+ + I+E N
Sbjct: 375 FKVSG-----VVQAISALCQKYPRKHSVMMTFLSNMLRDDGGFEYKKAIVDCIISIVEEN 429
Query: 427 PKLRVSIITRLLDNFYQIRAARVCTCALWIIGE 459
P+ + + + L + + T L ++G+
Sbjct: 430 PESKEAGLAHLCEFIEDCEHTVLATKILHLLGK 462
>UNIPROTKB|O75843 [details] [associations]
symbol:AP1G2 "AP-1 complex subunit gamma-like 2"
species:9606 "Homo sapiens" [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0010008 "endosome membrane" evidence=IEA] [GO:0030121 "AP-1
adaptor complex" evidence=TAS] [GO:0005798 "Golgi-associated
vesicle" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0030133 "transport vesicle" evidence=IDA] [GO:0016192
"vesicle-mediated transport" evidence=NAS] [GO:0005794 "Golgi
apparatus" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002553 InterPro:IPR008152
InterPro:IPR016024 InterPro:IPR017107 Pfam:PF01602 Pfam:PF02883
PIRSF:PIRSF037094 SMART:SM00809 InterPro:IPR013041
InterPro:IPR008153 GO:GO:0019048 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565
GO:GO:0010008 EMBL:CH471078 GO:GO:0030121 SUPFAM:SSF49348
eggNOG:NOG303101 HOGENOM:HOG000210271 Gene3D:2.60.40.1230
PANTHER:PTHR22780:SF5 PROSITE:PS50180 HOVERGEN:HBG067473
OrthoDB:EOG4ZGPBP EMBL:AB015318 EMBL:AF068706 IPI:IPI00027178
RefSeq:NP_003908.1 UniGene:Hs.343244 PDB:2E9G PDBsum:2E9G
ProteinModelPortal:O75843 SMR:O75843 IntAct:O75843
MINT:MINT-5005892 STRING:O75843 PhosphoSite:O75843 PaxDb:O75843
PeptideAtlas:O75843 PRIDE:O75843 Ensembl:ENST00000308724
Ensembl:ENST00000397120 GeneID:8906 KEGG:hsa:8906 UCSC:uc001wkl.2
CTD:8906 GeneCards:GC14M024028 HGNC:HGNC:556 HPA:HPA004106
MIM:603534 neXtProt:NX_O75843 PharmGKB:PA24846 InParanoid:O75843
OMA:PCAQLLH PhylomeDB:O75843 ChiTaRS:AP1G2 EvolutionaryTrace:O75843
GenomeRNAi:8906 NextBio:33461 ArrayExpress:O75843 Bgee:O75843
CleanEx:HS_AP1G2 Genevestigator:O75843 GermOnline:ENSG00000092051
Uniprot:O75843
Length = 785
Score = 94 (38.1 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 23/70 (32%), Positives = 39/70 (55%)
Query: 95 ILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNLQHRHPYIRRNAIL- 153
+LI +++N+L + ++G+ L L + E+ L P V + L PY+R+ AIL
Sbjct: 102 LLITNSIKNDLSQGIQPVQGLALCTLSTMGSAEMCRDLAPEVEKLLLQPSPYVRKKAILT 161
Query: 154 AVMAIYKLPQ 163
AV I K+P+
Sbjct: 162 AVHMIRKVPE 171
Score = 92 (37.4 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 55/265 (20%), Positives = 102/265 (38%)
Query: 204 INYLLTH-VDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXXXXXSLLNAPST------ 256
+ Y H + VS+ LQ+ +L L+R + R + + T
Sbjct: 230 MGYSTEHSISGVSD--PFLQVQILRLLRILGRNHEESSETMNDLLAQVATNTDTSRNAGN 287
Query: 257 AVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLDRLNELRSSHRDIMVD 316
AV++E T++ + SA A N + LL+ SD N++ + L L L S +
Sbjct: 288 AVLFETVLTIMDIRSAAGLRVLAVNILGRFLLN-SDRNIRYVALTSLLRLVQSDHSAVQR 346
Query: 317 LIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQSGELEKNGEYRQ 376
V+ L + + R+ L++ L L+ N+ +L +
Sbjct: 347 HRPTVVECLRETDASLSRRALELSLALVNSSNVRAMMQELQAFLESCPP-DLRADCA-SG 404
Query: 377 MLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVREIIEMNPKLRVSIITR 436
+L+ A K + T++H+L ++V D + + ++I +L + R
Sbjct: 405 ILLAAERFAPTKRWHI-DTILHVLTT--AGTHVRD--DAVANLTQLIGGAQELHAYSVRR 459
Query: 437 LLDNFYQ-IRAARVCTCALWIIGEY 460
L + + I + A W IGEY
Sbjct: 460 LYNALAEDISQQPLVQVAAWCIGEY 484
Score = 38 (18.4 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 655 ESEELKAKAQISHAQP 670
E++E K AQ+S A P
Sbjct: 598 EAKESKEAAQLSEAAP 613
>UNIPROTKB|B1ALD2 [details] [associations]
symbol:AP4B1 "AP-4 complex subunit beta-1" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0005802
"trans-Golgi network" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR026739 Pfam:PF01602 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0030117
GO:GO:0016192 GO:GO:0005802 PANTHER:PTHR11134 EMBL:AL137856
UniGene:Hs.515048 HGNC:HGNC:572 HOGENOM:HOG000294128
IPI:IPI00643929 SMR:B1ALD2 STRING:B1ALD2 Ensembl:ENST00000369571
HOVERGEN:HBG091836 Uniprot:B1ALD2
Length = 262
Score = 122 (48.0 bits), Expect = 0.00017, P = 0.00017
Identities = 53/220 (24%), Positives = 101/220 (45%)
Query: 14 GTPAIANEIKEALEGNDVPAKV----DAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHT 69
G+ + E+K+AL + A + +++ I + G + +F+ +V+ + D
Sbjct: 5 GSEDVVKELKKALCNPHIQADRLRYRNVIQRVIRYMTQGLDMSGVFMEMVK-ASATVDIV 63
Query: 70 IQKLLLLYLEIIDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEI 128
+KL+ LY+ T A + P++ L+ N L + PN +RG+ LR +C L +
Sbjct: 64 QKKLVYLYM----CTYAP--LKPDLALLAINTLCKDCSDPNPMVRGLALRSMCSLRMPGV 117
Query: 129 IEPLIPSVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKV-LSTEQDPSA 187
E + +L L+ + Y+RR A+L ++ L G+ VD + E L +QDP
Sbjct: 118 QEYIQQPILNGLRDKASYVRRVAVLGCAKMHNL-HGDSE-VDGALVNELYSLLRDQDPIV 175
Query: 188 KRNAFLMLFTC-DQDRAI-------NYLLTHVDRVSEWGE 219
N L Q+ + ++LL + ++ +WG+
Sbjct: 176 VVNCLRSLEEILKQEGGVVINKPIAHHLLNRMSKLDQWGQ 215
>UNIPROTKB|Q9Y678 [details] [associations]
symbol:COPG1 "Coatomer subunit gamma-1" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030126 "COPI vesicle coat" evidence=ISS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0048205 "COPI coating of Golgi
vesicle" evidence=TAS] [GO:0051683 "establishment of Golgi
localization" evidence=ISS] [GO:0072384 "organelle transport along
microtubule" evidence=ISS] [GO:0000139 "Golgi membrane"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] Reactome:REACT_11123 InterPro:IPR002553
InterPro:IPR009028 InterPro:IPR013040 InterPro:IPR014863
InterPro:IPR015873 InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752
InterPro:IPR013041 GO:GO:0005829 GO:GO:0005634 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0005198 EMBL:CH471052 SUPFAM:SSF55711
SUPFAM:SSF49348 Gene3D:3.30.310.30 GO:GO:0030126 GO:GO:0048205
GO:GO:0006890 GO:GO:0051683 GO:GO:0072384 CTD:22820 eggNOG:COG5240
HOGENOM:HOG000184434 HOVERGEN:HBG004368 OrthoDB:EOG4DZ1TM
Gene3D:2.60.40.1480 InterPro:IPR017106 PANTHER:PTHR10261
PIRSF:PIRSF037093 EMBL:AB047846 EMBL:AF100756 EMBL:AK001724
EMBL:AK291693 EMBL:BC066650 IPI:IPI00783982 RefSeq:NP_057212.1
UniGene:Hs.518250 PDB:1R4X PDBsum:1R4X ProteinModelPortal:Q9Y678
SMR:Q9Y678 DIP:DIP-29872N IntAct:Q9Y678 MINT:MINT-4657598
STRING:Q9Y678 PhosphoSite:Q9Y678 DMDM:12229771 PaxDb:Q9Y678
PeptideAtlas:Q9Y678 PRIDE:Q9Y678 Ensembl:ENST00000314797
GeneID:22820 KEGG:hsa:22820 UCSC:uc003els.3 GeneCards:GC03P128969
HGNC:HGNC:2236 HPA:HPA037867 neXtProt:NX_Q9Y678 PharmGKB:PA26752
InParanoid:Q9Y678 OMA:WDEVGEE ChiTaRS:COPG1
EvolutionaryTrace:Q9Y678 GenomeRNAi:22820 NextBio:43212
ArrayExpress:Q9Y678 Bgee:Q9Y678 CleanEx:HS_COPG
Genevestigator:Q9Y678 GermOnline:ENSG00000181789 Uniprot:Q9Y678
Length = 874
Score = 130 (50.8 bits), Expect = 0.00017, P = 0.00017
Identities = 85/462 (18%), Positives = 184/462 (39%)
Query: 10 HFDKGTPAIANEIKEALEGNDVPAKVDAMKKAIMLLLN-GETL-----PQLFITIVRYVL 63
H +K A+ E + E P K + I+ L+N GE L + F + + +
Sbjct: 21 HLEKS--AVLQEARVFNETPINPRKCAHILTKILYLINQGEHLGTTEATEAFFAMTK-LF 77
Query: 64 PSEDHTIQKLLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRL 123
S D T++++ YL I + + + ++I++ +L ++ + RG +R LC++
Sbjct: 78 QSNDPTLRRMC--YLTIKEMSC----IAEDVIIVTSSLTKDMTGKEDNYRGPAVRALCQI 131
Query: 124 NETEIIEPLIPSVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLSTEQ 183
++ +++ + + Q + + P + +A+ V +++ L ++ ++ S++
Sbjct: 132 TDSTMLQAIERYMKQAIVDKVPSVSSSAL--VSSLHLLKCSFDVVKRWVNEAQEAASSDN 189
Query: 184 DPSAKRNAFLMLFTCDQDR-AINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXX 242
L+ DR A+N +++ V R +++ + K
Sbjct: 190 IMVQYHALGLLYHVRKNDRLAVNKMISKVTRHGLKSPFAYCMMIRVASKQLEEEDGSRDS 249
Query: 243 -XXXXXXSLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLD 301
S L V+YE A +V+L A A + QL S ++ +
Sbjct: 250 PLFDFIESCLRNKHEMVVYEAASAIVNLPGCSAKELAPAVSVLQLFCSSPKAALRYAAVR 309
Query: 302 RLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXX 361
LN++ H + +D+ + N I + +L+ + +I+
Sbjct: 310 TLNKVAMKHPSAVTACNLDLENLVTDSNRSIATLAITTLLKTGSESSIDRLMKQISSFMS 369
Query: 362 XTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFL---GDSNVASAI-DVII 417
E + E++ +++QAI + K+P + +++ L L G AI D II
Sbjct: 370 -------EISDEFKVVVVQAISALCQKYPRKHAVLMNFLFTMLREEGGFEYKRAIVDCII 422
Query: 418 FVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGE 459
IIE N + + + ++ L + + T L ++G+
Sbjct: 423 ---SIIEENSESKETGLSHLCEFIEDCEFTVLATRILHLLGQ 461
>ZFIN|ZDB-GENE-030131-3187 [details] [associations]
symbol:ap1g1 "adaptor-related protein complex 1,
gamma 1 subunit" species:7955 "Danio rerio" [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0030131 "clathrin adaptor
complex" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR016024
InterPro:IPR017107 Pfam:PF01602 Pfam:PF02883 PIRSF:PIRSF037094
SMART:SM00809 InterPro:IPR013041 InterPro:IPR008153
ZFIN:ZDB-GENE-030131-3187 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565
GO:GO:0030131 SUPFAM:SSF49348 Gene3D:2.60.40.1230
PANTHER:PTHR22780:SF5 PROSITE:PS50180 GeneTree:ENSGT00390000012618
GO:GO:0044431 EMBL:CU914549 IPI:IPI01024413
Ensembl:ENSDART00000150062 ArrayExpress:F8W5I5 Uniprot:F8W5I5
Length = 821
Score = 91 (37.1 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 26/107 (24%), Positives = 55/107 (51%)
Query: 95 ILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNLQHRHPYIRRNAIL- 153
+L+ ++N+L H +Y++G+ L L + +E+ L V + L+ + Y+R+ A L
Sbjct: 103 LLMTNCIKNDLNHSTQYVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALC 162
Query: 154 AVMAIYKLPQGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLFTCDQ 200
AV I K+P+ ++ + A + +LS + + L+ C++
Sbjct: 163 AVHVIRKVPELMEMFLPATK---NLLSEKNHGVLHTSVVLLTEMCER 206
Score = 89 (36.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 47/211 (22%), Positives = 90/211 (42%)
Query: 257 AVIYECAGTLVSLSSAPTAIRAAA-NTYSQLLLSQSDNNVKLIVLDRL-NELRSSHRDIM 314
A++YE T++ + S + +R A N + LL+ +D N++ + L L +++ H +
Sbjct: 289 AILYETVLTIMDIKSE-SGLRVLAINILGRFLLN-NDKNIRYVALTSLLKTVQTDHNAVQ 346
Query: 315 V--DLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQSGELEKNG 372
I+D L+ L+ + I+R+ +++ L+ NI S + E
Sbjct: 347 RHRSTIVDCLKDLD---VSIKRRAMELSFALVNGNNIRGMMKELLYFL---DSCDPEFKA 400
Query: 373 EYRQMLIQAIHSCAIKFPEVASTVVHLLM---DFLGDSNVASAIDVIIFVREIIEMNPKL 429
+ + A A T++ +L ++ D +V + I +I +EM+
Sbjct: 401 DCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDDSVPNLIQLIT---NSVEMHAYT 457
Query: 430 RVSIITRLLDNFYQIRAARVCTCALWIIGEY 460
+ LLD+ Q +V A W IGEY
Sbjct: 458 VQRLYKALLDDISQQPLVQV---ASWCIGEY 485
>WB|WBGene00000158 [details] [associations]
symbol:apg-1 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030131 "clathrin adaptor
complex" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0001703 "gastrulation with mouth forming first"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0009306
"protein secretion" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002553 InterPro:IPR008152
InterPro:IPR016024 InterPro:IPR017107 Pfam:PF01602 Pfam:PF02883
PIRSF:PIRSF037094 SMART:SM00809 InterPro:IPR013041
InterPro:IPR008153 GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0002119 GO:GO:0016192 GO:GO:0008565 GO:GO:0040011
GO:GO:0009306 GO:GO:0030131 SUPFAM:SSF49348 eggNOG:NOG303101
HOGENOM:HOG000210271 KO:K12391 Gene3D:2.60.40.1230
PANTHER:PTHR22780:SF5 PROSITE:PS50180 GeneTree:ENSGT00390000012618
GO:GO:0044431 OMA:DERSEVH HSSP:P17427 GO:GO:0001703 EMBL:AL132876
RefSeq:NP_740937.1 ProteinModelPortal:Q8WQB3 SMR:Q8WQB3
STRING:Q8WQB3 PaxDb:Q8WQB3 EnsemblMetazoa:Y105E8A.9 GeneID:173304
KEGG:cel:CELE_Y105E8A.9 UCSC:Y105E8A.9 CTD:173304
WormBase:Y105E8A.9 InParanoid:Q8WQB3 NextBio:879077 Uniprot:Q8WQB3
Length = 829
Score = 100 (40.3 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 46/209 (22%), Positives = 90/209 (43%)
Query: 257 AVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLDRLNELRSSHRDIM-V 315
A++YE T++ + S A N + LL+ +D N++ + L+ L L++ H D V
Sbjct: 309 AILYETVLTIMEIKSESGLRILAVNILGRFLLN-TDKNIRYVALNTL--LKTVHVDYQAV 365
Query: 316 DLIMDVL-RALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQSGELEKNGEY 374
+V+ L P++ IR++ +++ L+ NI T E +
Sbjct: 366 QRHRNVVVECLKDPDISIRKRAMELCFALMNRTNI-AIMTKEVLIFLETADAEFKSECAS 424
Query: 375 RQMLIQAIHSCAIKFP-EVASTVVHLLMDFLGDSNVASAIDVIIFVREIIEMNPKLRVSI 433
R + +S ++ + TV+ L ++ D V+ I ++I N +L+
Sbjct: 425 RMYIATERYSPNHEWHLDTMITVLRLAGKYVPDEVVSCMI-------QMISANEQLQSYA 477
Query: 434 ITRLLDNFYQ--IRAARVCTCALWIIGEY 460
+++L + I A + A W IGE+
Sbjct: 478 VSQLYHAAQKDAINAQPLLQVAFWTIGEF 506
Score = 77 (32.2 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 25/108 (23%), Positives = 53/108 (49%)
Query: 18 IANEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDH-TIQKLLLL 76
+ANE+++ ++ N+ K A A ++ L ++FI R +L ++H + L
Sbjct: 160 LANEVEKIIKQNNAYLKKKAALCAFRIVRKVPELMEVFIPCTRSLLGEKNHGVLMGATTL 219
Query: 77 YLEIIDKT-DAKG---RVLPEMILICQNLRNNLQHPNEYIRGVTLRFL 120
E+ +K+ D +++P ++ I +NL + P + G++ FL
Sbjct: 220 VTEMCEKSPDVLNHFKKLVPNLVRILKNLLMSGYSPEHDVTGISDPFL 267
>UNIPROTKB|F1NDA9 [details] [associations]
symbol:AP1G1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] [GO:0044431 "Golgi
apparatus part" evidence=IEA] [GO:0005802 "trans-Golgi network"
evidence=IEA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0030136 "clathrin-coated vesicle" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0055037
"recycling endosome" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR016024 InterPro:IPR017107
Pfam:PF01602 Pfam:PF02883 PIRSF:PIRSF037094 SMART:SM00809
InterPro:IPR013041 InterPro:IPR008153 GO:GO:0048471 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 GO:GO:0030136 GO:GO:0055037 GO:GO:0005802
GO:GO:0030131 SUPFAM:SSF49348 Gene3D:2.60.40.1230
PANTHER:PTHR22780:SF5 PROSITE:PS50180 GeneTree:ENSGT00390000012618
GO:GO:0044431 OMA:DCASGVF EMBL:AADN02054199 IPI:IPI00592100
Ensembl:ENSGALT00000001245 Uniprot:F1NDA9
Length = 820
Score = 94 (38.1 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 30/131 (22%), Positives = 67/131 (51%)
Query: 95 ILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNLQHRHPYIRRNAIL- 153
+L+ ++N+L H +Y++G+ L L + +E+ L V + L+ + Y+R+ A L
Sbjct: 101 LLMTNCIKNDLNHSTQYVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALC 160
Query: 154 AVMAIYKLPQGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLFTCDQDRAINYLLTHVDR 213
AV I K+P+ ++ + A + +L+ + + L+ C++ +L H +
Sbjct: 161 AVHVIRKVPELMEMFLPATK---NLLNEKNHGVLHTSVVLLTEMCERSPD---MLAHFRK 214
Query: 214 VSEWGELLQMV 224
VS +L++++
Sbjct: 215 VSLVPQLVRIL 225
Score = 83 (34.3 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 52/253 (20%), Positives = 102/253 (40%)
Query: 221 LQMVVLELIRKVCRTNXXXXXXXXXXXXSLLNAPST------AVIYECAGTLVSLSSAPT 274
LQ+ +L L+R + R + + T A++YE T++ + S +
Sbjct: 247 LQVRILRLLRILGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDIKSE-S 305
Query: 275 AIRAAA-NTYSQLLLSQSDNNVKLIVLDRL-NELRSSHRDIMV--DLIMDVLRALNSPNL 330
+R A N + LL+ +D N++ + L L +++ H + I+D L+ L+ +
Sbjct: 306 GLRVLAINILGRFLLN-NDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLD---V 361
Query: 331 DIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQSGELEKNGEYRQMLIQAIHSCAIKFP 390
I+R+ +++ L+ N+ S E E + + A A
Sbjct: 362 SIKRRAMELSFALVNGNNVRGMMKELLYFL---DSCEPEFKADCASGIFLAAEKYAPSKR 418
Query: 391 EVASTVVHLLM---DFLGDSNVASAIDVIIFVREIIEMNPKLRVSIITRLLDNFYQIRAA 447
T++ +L ++ D V + I +I +EM+ + +L ++ Q
Sbjct: 419 WHIDTIMRVLTTAGSYVRDDAVPNLIQLIT---NSVEMHAYTVQRLYKAILGDYSQQPLV 475
Query: 448 RVCTCALWIIGEY 460
+V A W IGEY
Sbjct: 476 QV---ASWCIGEY 485
>UNIPROTKB|Q9UPM8 [details] [associations]
symbol:AP4E1 "AP-4 complex subunit epsilon-1" species:9606
"Homo sapiens" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
Reactome:REACT_11123 InterPro:IPR002553 InterPro:IPR011710
InterPro:IPR016024 Pfam:PF01602 Pfam:PF07718 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0005198 EMBL:CH471082 eggNOG:NOG303101 Orphanet:280763
EMBL:AF155156 EMBL:AB030653 EMBL:CR749604 EMBL:AC021752
EMBL:AC022407 EMBL:AC073964 EMBL:BC126308 EMBL:BC130466
IPI:IPI00010213 RefSeq:NP_001239056.1 RefSeq:NP_031373.2
UniGene:Hs.413366 ProteinModelPortal:Q9UPM8 SMR:Q9UPM8
IntAct:Q9UPM8 STRING:Q9UPM8 PhosphoSite:Q9UPM8 DMDM:145559441
PaxDb:Q9UPM8 PRIDE:Q9UPM8 DNASU:23431 Ensembl:ENST00000261842
Ensembl:ENST00000560508 GeneID:23431 KEGG:hsa:23431 UCSC:uc001zyx.2
CTD:23431 GeneCards:GC15P051200 HGNC:HGNC:573 HPA:HPA041749
HPA:HPA041891 MIM:607244 MIM:613744 neXtProt:NX_Q9UPM8
PharmGKB:PA24865 HOGENOM:HOG000231886 HOVERGEN:HBG050522
InParanoid:Q9UPM8 KO:K12400 OMA:KYAPDNA OrthoDB:EOG4QFWCJ
GenomeRNAi:23431 NextBio:45677 Bgee:Q9UPM8 CleanEx:HS_AP4E1
Genevestigator:Q9UPM8 GermOnline:ENSG00000081014 GO:GO:0030126
InterPro:IPR017109 PANTHER:PTHR22780:SF6 PIRSF:PIRSF037097
Uniprot:Q9UPM8
Length = 1137
Score = 87 (35.7 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 22/93 (23%), Positives = 46/93 (49%)
Query: 257 AVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLDRLNELRSSHRDIMVD 316
A+++EC T+ S+ + AA + +LS N +K + L L + + +
Sbjct: 315 AILFECVHTVYSIYPKSELLEKAAKCIGKFVLSPKIN-LKYLGLKALTYVIQQDPTLALQ 373
Query: 317 LIMDVLRALNSPNLDIRRKTLDIVLELITPRNI 349
M ++ L+ P+ I+R+TL+++ + +NI
Sbjct: 374 HQMTIIECLDHPDPIIKRETLELLYRITNAQNI 406
Score = 72 (30.4 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 25/113 (22%), Positives = 54/113 (47%)
Query: 740 DIVLDV-TVINRTKETLQNLCLELATMGDLKLVERPQNY--TLAPESSKQIKANIKVSST 796
D +L V +V N++ L++ LE+ + K+ E+P + ES+K + ++++
Sbjct: 938 DCLLMVWSVTNKSGLELKSADLEIFPAENFKVTEQPGCCLPVMEAESTKSFQYSVQIEKP 997
Query: 797 ET-GVIFGNIVYETSNVLERTVVVLNDIHIDIMDYISPAVCTDAAFRTMWAEF 848
T G + G I Y + + + +++ ++D+I P + F +W F
Sbjct: 998 FTEGNLTGFISYHMMDT--HSAQLEFSVNLSLLDFIRPLKISSDDFGKLWLSF 1048
Score = 67 (28.6 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 16/62 (25%), Positives = 32/62 (51%)
Query: 94 MILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNLQHRHPYIRRNAIL 153
++L+ + +LQ N + L + ++ E+I ++P + LQH +RR A+L
Sbjct: 131 LLLLVNTVVKDLQSTNLVEVCMALTVVSQIFPCEMIPAVLPLIEDKLQHSKEIVRRKAVL 190
Query: 154 AV 155
A+
Sbjct: 191 AL 192
>CGD|CAL0003766 [details] [associations]
symbol:orf19.7212 species:5476 "Candida albicans" [GO:0030447
"filamentous growth" evidence=IMP] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 PIRSF:PIRSF002291 CGD:CAL0003766 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0030117
GO:GO:0016192 GO:GO:0008565 GO:GO:0030447 eggNOG:COG5096
HOGENOM:HOG000163270 PANTHER:PTHR11134 EMBL:AACQ01000092
RefSeq:XP_715013.1 ProteinModelPortal:Q59ZX9 STRING:Q59ZX9
GeneID:3643342 KEGG:cal:CaO19.7212 Uniprot:Q59ZX9
Length = 767
Score = 91 (37.1 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 25/90 (27%), Positives = 44/90 (48%)
Query: 379 IQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAI--DVIIFVREIIEMNPKLRVSIITR 436
I+A + A+K A V ++ D + SN S I + I ++ I+ P I+
Sbjct: 452 IRAFGNLAVKLENAAEQCVEVICDLV--SNGISYIVQESAIVIKNILRKYPGQFEFAISE 509
Query: 437 LLDNFYQIRAARVCTCALWIIGEYCQSLSE 466
L+ ++ I T +WI+G+YCQ++ E
Sbjct: 510 LIKHYKLIDEPDAKTAFVWILGQYCQNIKE 539
Score = 85 (35.0 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 29/148 (19%), Positives = 67/148 (45%)
Query: 15 TPAIANEIKEALEGNDVPAKVDAMKKAIM--LLLNGETLPQLFITIVRYVLPSEDHTIQK 72
T + E+++A + + +V + K ++ ++LN + L I+ ++ +D ++K
Sbjct: 89 TTELRTELEQAFKKSKPVVRVKVVLKKVLANIILNNHEVTNLMKDIIP-LMKIDDLEVRK 147
Query: 73 LLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPL 132
L Y+ T+ + I ++ PN +R ++L+ + +N E +
Sbjct: 148 LCCEYISTYATTNPDAE---DAIPFFSRFHSD---PNPLLRVLSLKTMVSINRKEFLNLS 201
Query: 133 IPSVLQNLQHRHPYIRRNAILAVMAIYK 160
I S ++ + P +R++A A IY+
Sbjct: 202 ITSCKRSFSDKDPDVRKSAAYAAGQIYQ 229
>UNIPROTKB|Q59ZX9 [details] [associations]
symbol:APL1 "Potential clathrin-associated protein AP-2
complex component" species:237561 "Candida albicans SC5314"
[GO:0030447 "filamentous growth" evidence=IMP] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 PIRSF:PIRSF002291 CGD:CAL0003766 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0030117
GO:GO:0016192 GO:GO:0008565 GO:GO:0030447 eggNOG:COG5096
HOGENOM:HOG000163270 PANTHER:PTHR11134 EMBL:AACQ01000092
RefSeq:XP_715013.1 ProteinModelPortal:Q59ZX9 STRING:Q59ZX9
GeneID:3643342 KEGG:cal:CaO19.7212 Uniprot:Q59ZX9
Length = 767
Score = 91 (37.1 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 25/90 (27%), Positives = 44/90 (48%)
Query: 379 IQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAI--DVIIFVREIIEMNPKLRVSIITR 436
I+A + A+K A V ++ D + SN S I + I ++ I+ P I+
Sbjct: 452 IRAFGNLAVKLENAAEQCVEVICDLV--SNGISYIVQESAIVIKNILRKYPGQFEFAISE 509
Query: 437 LLDNFYQIRAARVCTCALWIIGEYCQSLSE 466
L+ ++ I T +WI+G+YCQ++ E
Sbjct: 510 LIKHYKLIDEPDAKTAFVWILGQYCQNIKE 539
Score = 85 (35.0 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 29/148 (19%), Positives = 67/148 (45%)
Query: 15 TPAIANEIKEALEGNDVPAKVDAMKKAIM--LLLNGETLPQLFITIVRYVLPSEDHTIQK 72
T + E+++A + + +V + K ++ ++LN + L I+ ++ +D ++K
Sbjct: 89 TTELRTELEQAFKKSKPVVRVKVVLKKVLANIILNNHEVTNLMKDIIP-LMKIDDLEVRK 147
Query: 73 LLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPL 132
L Y+ T+ + I ++ PN +R ++L+ + +N E +
Sbjct: 148 LCCEYISTYATTNPDAE---DAIPFFSRFHSD---PNPLLRVLSLKTMVSINRKEFLNLS 201
Query: 133 IPSVLQNLQHRHPYIRRNAILAVMAIYK 160
I S ++ + P +R++A A IY+
Sbjct: 202 ITSCKRSFSDKDPDVRKSAAYAAGQIYQ 229
>ASPGD|ASPL0000055849 [details] [associations]
symbol:AN0165 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0030123 "AP-3 adaptor complex" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0006896 "Golgi to
vacuole transport" evidence=IEA] [GO:0006623 "protein targeting to
vacuole" evidence=IEA] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR026739 InterPro:IPR026740 Pfam:PF01602 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
EMBL:BN001308 PANTHER:PTHR11134 GO:GO:0030123 PANTHER:PTHR11134:SF1
OMA:LLHGHFR EnsemblFungi:CADANIAT00002572 HOGENOM:HOG000175744
Uniprot:C8VQ45
Length = 841
Score = 116 (45.9 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 51/219 (23%), Positives = 99/219 (45%)
Query: 22 IKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEII 81
IK+ L+ +D +++ I L+ E F +V+ V S + ++KL+ +YL +
Sbjct: 45 IKKLLDSRSDRDVLDGLRRIISLMYRSEPSVPFFSAVVKNVA-SANLEVKKLVYIYL--V 101
Query: 82 DKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNL 140
+A+ P++ L+ N ++ +L N R + LR + + I + + ++ +
Sbjct: 102 HHAEAE----PDLALLSINAIQKSLTDQNPQARAMALRTMASIRVPVINQIVSLAIKRGC 157
Query: 141 QHRHPYIRRNAILAVMAIYKL-PQGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLFTC- 198
P++R+ A LA+ Y+L P + L+ IE +L Q A L C
Sbjct: 158 GDMSPHVRKAAALAIPKCYRLDPSTQPQLIG---YIETLLGDTQYFVAGPAVAAFLEVCP 214
Query: 199 DQDRAIN--Y--LLTHVDRVSEWGELLQMVVLELIRKVC 233
D+ I+ Y L+ + + EWG+L + +L + C
Sbjct: 215 DRIDLIHKHYRSLVKKLVDMDEWGQLATLRLLTFYARKC 253
Score = 59 (25.8 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 19/85 (22%), Positives = 39/85 (45%)
Query: 379 IQAIHSCAIKFPEVASTVVHLLMD---FLGDSNVASAIDVIIFVREIIEMNPKLRVSIIT 435
++A+ CA P A + +L++ L D+ V+ ++ VI R +I+ +P +
Sbjct: 427 VRALGRCAQGDPNAADKCLRILLNQITSLDDTLVSESLTVI---RHLIQHDPGSHERTVI 483
Query: 436 RLLDNFYQIRAARVCTCALWIIGEY 460
+L+ +W++GEY
Sbjct: 484 QLVKYLGLTTNPDARATIVWLVGEY 508
>RGD|2324507 [details] [associations]
symbol:Ap1g2 "adaptor-related protein complex 1, gamma 2
subunit" species:10116 "Rattus norvegicus" [GO:0005798
"Golgi-associated vesicle" evidence=IEA;ISO] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0016020 "membrane"
evidence=ISO] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0030133 "transport vesicle" evidence=IEA;ISO]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR016024
InterPro:IPR017107 Pfam:PF01602 Pfam:PF02883 PIRSF:PIRSF037094
SMART:SM00809 InterPro:IPR013041 InterPro:IPR008153 RGD:2324507
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 GO:GO:0005798 GO:GO:0030133
GO:GO:0030131 SUPFAM:SSF49348 KO:K12391 Gene3D:2.60.40.1230
PANTHER:PTHR22780:SF5 PROSITE:PS50180 OrthoDB:EOG4ZGPBP
GeneTree:ENSGT00390000012618 OMA:PCAQLLH IPI:IPI00362181
RefSeq:XP_002728326.1 RefSeq:XP_003752847.1
Ensembl:ENSRNOT00000033977 GeneID:100362547 KEGG:rno:100362547
UCSC:RGD:2324507 Uniprot:D3ZGW2
Length = 785
Score = 91 (37.1 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 55/269 (20%), Positives = 102/269 (37%)
Query: 206 YLLTH-VDRVSEWGELLQMVVLELIRKVCRTNXXXXXXXXXXXXSLLNAPST------AV 258
Y H + VS+ LQ+ +L L+R + R + + T AV
Sbjct: 231 YSTEHSISGVSD--PFLQVQILRLLRILGRNHEESSETMNDLLAQVATNTDTSRNAGNAV 288
Query: 259 IYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLDRLNELRSSHRDIMVDLI 318
+ E T++++ SA A N + LL+ +D N++ + L L +L S +
Sbjct: 289 LLETVLTIMAIHSAAGLRVLAVNILGRFLLN-NDKNIRYVALTSLLQLVQSDHSAVQRHR 347
Query: 319 MDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQSGELEKNGEYRQML 378
V+ L + + R+ L++ L L+ N+ +S + + +
Sbjct: 348 STVVECLQEKDASLSRRALELSLALVNSSNVRAMMQELQAFL---ESCPPDLRADCASGI 404
Query: 379 IQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVREIIEMNPKLRVSIITRLL 438
+ A A T++H+L ++V D + + ++I +L + RL
Sbjct: 405 LLAAERFAPSKRWHIDTILHVLTT--AGTHVRD--DAVANLTQLIGEAEELHTYSVRRLY 460
Query: 439 DNFYQ-IRAARVCTCALWIIGEYCQSLSE 466
+ I + A W IGEY L E
Sbjct: 461 SALAEDISQQPLVQVAAWCIGEYGDLLLE 489
Score = 84 (34.6 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 22/70 (31%), Positives = 37/70 (52%)
Query: 95 ILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNLQHRHPYIRRNAILA 154
+LI +++N+L + ++G+ L L + E+ L V + Q PY+R+ AILA
Sbjct: 101 LLITNSIKNDLSQGIQPVQGLALCTLSTMGSAEMCRDLATEVEKLFQQPSPYVRKKAILA 160
Query: 155 -VMAIYKLPQ 163
V I K P+
Sbjct: 161 AVHMIRKDPE 170
>UNIPROTKB|F1MF68 [details] [associations]
symbol:AP1G1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0044431 "Golgi apparatus part" evidence=IEA]
[GO:0030131 "clathrin adaptor complex" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR016024 InterPro:IPR017107
Pfam:PF01602 Pfam:PF02883 PIRSF:PIRSF037094 SMART:SM00809
InterPro:IPR013041 InterPro:IPR008153 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565
GO:GO:0030131 SUPFAM:SSF49348 Gene3D:2.60.40.1230
PANTHER:PTHR22780:SF5 PROSITE:PS50180 GeneTree:ENSGT00390000012618
GO:GO:0044431 EMBL:DAAA02046759 IPI:IPI00686299 UniGene:Bt.3110
Ensembl:ENSBTAT00000003599 NextBio:20868171 Uniprot:F1MF68
Length = 822
Score = 90 (36.7 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 22/78 (28%), Positives = 44/78 (56%)
Query: 95 ILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNLQHRHPYIRRNAIL- 153
+L+ ++N+L H +Y++G+ L L + +E+ L V + L+ + Y+R+ A L
Sbjct: 101 LLMTNCIKNDLNHSTQYVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALC 160
Query: 154 AVMAIYKLPQGEQLLVDA 171
AV I K+P+ ++ + A
Sbjct: 161 AVHVIRKVPELMEMFLPA 178
Score = 85 (35.0 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 53/253 (20%), Positives = 102/253 (40%)
Query: 221 LQMVVLELIRKVCRTNXXXXXXXXXXXXSLLNAPST------AVIYECAGTLVSLSSAPT 274
LQ+ +L L+R + R + + T A++YE T++ + S +
Sbjct: 245 LQVRILRLLRILGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDIKSE-S 303
Query: 275 AIRAAA-NTYSQLLLSQSDNNVKLIVLDRL-NELRSSHRDIMV--DLIMDVLRALNSPNL 330
+R A N + LL+ +D N++ + L L +++ H + I+D L+ L+ +
Sbjct: 304 GLRVLAINILGRFLLN-NDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLD---V 359
Query: 331 DIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQSGELEKNGEYRQMLIQAIHSCAIKFP 390
I+R+ +++ L+ NI S E E + + A A
Sbjct: 360 SIKRRAMELSFALVNGNNIRGMMKELLYFL---DSCEPEFKADCASGIFLAAEKYAPSKR 416
Query: 391 EVASTVVHLLM---DFLGDSNVASAIDVIIFVREIIEMNPKLRVSIITRLLDNFYQIRAA 447
T++ +L ++ D V + I +I +EM+ + +L ++ Q
Sbjct: 417 WHIDTIMRVLTTAGSYVRDDAVPNLIQLIT---NSVEMHAYTVQRLYKAILGDYSQQPLV 473
Query: 448 RVCTCALWIIGEY 460
+V A W IGEY
Sbjct: 474 QV---AAWCIGEY 483
>UNIPROTKB|E2RPG3 [details] [associations]
symbol:AP1G1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0055037 "recycling endosome" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0030136 "clathrin-coated vesicle" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] [GO:0005802 "trans-Golgi network"
evidence=IEA] [GO:0044431 "Golgi apparatus part" evidence=IEA]
[GO:0030131 "clathrin adaptor complex" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR016024 InterPro:IPR017107
Pfam:PF01602 Pfam:PF02883 PIRSF:PIRSF037094 SMART:SM00809
InterPro:IPR013041 InterPro:IPR008153 GO:GO:0048471 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 GO:GO:0030136 GO:GO:0055037 GO:GO:0005802
GO:GO:0030131 SUPFAM:SSF49348 KO:K12391 Gene3D:2.60.40.1230
PANTHER:PTHR22780:SF5 PROSITE:PS50180 CTD:164
GeneTree:ENSGT00390000012618 GO:GO:0044431 OMA:KIWYIDQ
EMBL:AAEX03004089 EMBL:AAEX03004087 EMBL:AAEX03004088
RefSeq:XP_862506.1 ProteinModelPortal:E2RPG3
Ensembl:ENSCAFT00000032187 GeneID:479666 KEGG:cfa:479666
NextBio:20854810 Uniprot:E2RPG3
Length = 822
Score = 90 (36.7 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 22/78 (28%), Positives = 44/78 (56%)
Query: 95 ILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNLQHRHPYIRRNAIL- 153
+L+ ++N+L H +Y++G+ L L + +E+ L V + L+ + Y+R+ A L
Sbjct: 101 LLMTNCIKNDLNHSTQYVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALC 160
Query: 154 AVMAIYKLPQGEQLLVDA 171
AV I K+P+ ++ + A
Sbjct: 161 AVHVIRKVPELMEMFLPA 178
Score = 85 (35.0 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 53/253 (20%), Positives = 102/253 (40%)
Query: 221 LQMVVLELIRKVCRTNXXXXXXXXXXXXSLLNAPST------AVIYECAGTLVSLSSAPT 274
LQ+ +L L+R + R + + T A++YE T++ + S +
Sbjct: 245 LQVRILRLLRILGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDIKSE-S 303
Query: 275 AIRAAA-NTYSQLLLSQSDNNVKLIVLDRL-NELRSSHRDIMV--DLIMDVLRALNSPNL 330
+R A N + LL+ +D N++ + L L +++ H + I+D L+ L+ +
Sbjct: 304 GLRVLAINILGRFLLN-NDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLD---V 359
Query: 331 DIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQSGELEKNGEYRQMLIQAIHSCAIKFP 390
I+R+ +++ L+ NI S E E + + A A
Sbjct: 360 SIKRRAMELSFALVNGNNIRGMMKELLYFL---DSCEPEFKADCASGIFLAAEKYAPSKR 416
Query: 391 EVASTVVHLLM---DFLGDSNVASAIDVIIFVREIIEMNPKLRVSIITRLLDNFYQIRAA 447
T++ +L ++ D V + I +I +EM+ + +L ++ Q
Sbjct: 417 WHIDTIMRVLTTAGSYVRDDAVPNLIQLIT---NSVEMHAYTVQRLYKAILGDYSQQPLV 473
Query: 448 RVCTCALWIIGEY 460
+V A W IGEY
Sbjct: 474 QV---AAWCIGEY 483
>UNIPROTKB|G3MZH4 [details] [associations]
symbol:AP1G1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0055037 "recycling endosome" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0030136
"clathrin-coated vesicle" evidence=IEA] [GO:0019894 "kinesin
binding" evidence=IEA] [GO:0005802 "trans-Golgi network"
evidence=IEA] [GO:0044431 "Golgi apparatus part" evidence=IEA]
[GO:0030131 "clathrin adaptor complex" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR016024 InterPro:IPR017107
Pfam:PF01602 Pfam:PF02883 PIRSF:PIRSF037094 SMART:SM00809
InterPro:IPR013041 InterPro:IPR008153 GO:GO:0048471 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 GO:GO:0030136 GO:GO:0055037 GO:GO:0005802
GO:GO:0030131 SUPFAM:SSF49348 KO:K12391 Gene3D:2.60.40.1230
PANTHER:PTHR22780:SF5 PROSITE:PS50180 CTD:164
GeneTree:ENSGT00390000012618 GO:GO:0044431 OMA:DCASGVF
EMBL:DAAA02046759 UniGene:Bt.3110 NextBio:20868171
RefSeq:NP_001178365.1 PRIDE:G3MZH4 Ensembl:ENSBTAT00000065037
GeneID:507677 KEGG:bta:507677 Uniprot:G3MZH4
Length = 825
Score = 90 (36.7 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 22/78 (28%), Positives = 44/78 (56%)
Query: 95 ILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNLQHRHPYIRRNAIL- 153
+L+ ++N+L H +Y++G+ L L + +E+ L V + L+ + Y+R+ A L
Sbjct: 101 LLMTNCIKNDLNHSTQYVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALC 160
Query: 154 AVMAIYKLPQGEQLLVDA 171
AV I K+P+ ++ + A
Sbjct: 161 AVHVIRKVPELMEMFLPA 178
Score = 85 (35.0 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 53/253 (20%), Positives = 102/253 (40%)
Query: 221 LQMVVLELIRKVCRTNXXXXXXXXXXXXSLLNAPST------AVIYECAGTLVSLSSAPT 274
LQ+ +L L+R + R + + T A++YE T++ + S +
Sbjct: 248 LQVRILRLLRILGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDIKSE-S 306
Query: 275 AIRAAA-NTYSQLLLSQSDNNVKLIVLDRL-NELRSSHRDIMV--DLIMDVLRALNSPNL 330
+R A N + LL+ +D N++ + L L +++ H + I+D L+ L+ +
Sbjct: 307 GLRVLAINILGRFLLN-NDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLD---V 362
Query: 331 DIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQSGELEKNGEYRQMLIQAIHSCAIKFP 390
I+R+ +++ L+ NI S E E + + A A
Sbjct: 363 SIKRRAMELSFALVNGNNIRGMMKELLYFL---DSCEPEFKADCASGIFLAAEKYAPSKR 419
Query: 391 EVASTVVHLLM---DFLGDSNVASAIDVIIFVREIIEMNPKLRVSIITRLLDNFYQIRAA 447
T++ +L ++ D V + I +I +EM+ + +L ++ Q
Sbjct: 420 WHIDTIMRVLTTAGSYVRDDAVPNLIQLIT---NSVEMHAYTVQRLYKAILGDYSQQPLV 476
Query: 448 RVCTCALWIIGEY 460
+V A W IGEY
Sbjct: 477 QV---AAWCIGEY 486
>UNIPROTKB|E2RPG9 [details] [associations]
symbol:COPG1 "Coatomer subunit gamma" species:9615 "Canis
lupus familiaris" [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
InterPro:IPR002553 InterPro:IPR009028 InterPro:IPR013040
InterPro:IPR014863 InterPro:IPR015873 InterPro:IPR016024
Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0005198 SUPFAM:SSF55711 SUPFAM:SSF49348 Gene3D:3.30.310.30
GO:GO:0030126 CTD:22820 GeneTree:ENSGT00390000016313
Gene3D:2.60.40.1480 InterPro:IPR017106 PANTHER:PTHR10261
PIRSF:PIRSF037093 OMA:WDEVGEE EMBL:AAEX03012021 RefSeq:XP_533723.2
Ensembl:ENSCAFT00000006920 GeneID:476517 KEGG:cfa:476517
Uniprot:E2RPG9
Length = 874
Score = 125 (49.1 bits), Expect = 0.00058, P = 0.00058
Identities = 84/462 (18%), Positives = 183/462 (39%)
Query: 10 HFDKGTPAIANEIKEALEGNDVPAKVDAMKKAIMLLLN-GETL-----PQLFITIVRYVL 63
H +K A+ E + E P K + I+ L+N GE L + F + + +
Sbjct: 21 HLEKS--AVLQEARVFNETPINPRKCAHILTKILYLINQGEHLGTTEATEAFFAMTK-LF 77
Query: 64 PSEDHTIQKLLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRL 123
S D T++++ YL I + + + ++I++ +L ++ + RG +R LC++
Sbjct: 78 QSNDPTLRRMC--YLTIKEMSC----IAEDVIIVTSSLTKDMTGKEDNYRGPAVRALCQI 131
Query: 124 NETEIIEPLIPSVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLSTEQ 183
++ +++ + + Q + + P + +A+ V +++ L ++ ++ S++
Sbjct: 132 TDSTMLQAIERYMKQAIVDKVPSVSSSAL--VSSLHLLKCSFDVVKRWVNEAQEAASSDN 189
Query: 184 DPSAKRNAFLMLFTCDQDR-AINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXXXXX 242
L+ DR A+N +++ R +++ + K
Sbjct: 190 IMVQYHALGLLYHVRKNDRLAVNKMISKFTRHGLKSPFAYCMMIRVASKQLEEEDGSRDS 249
Query: 243 -XXXXXXSLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLD 301
S L V+YE A +V+L A A + QL S ++ +
Sbjct: 250 PLFDFIESCLRNKHEMVVYEAASAIVNLPGCSAKELAPAVSVLQLFCSSPKAALRYAAVR 309
Query: 302 RLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXXX 361
LN++ H + +D+ + N I + +L+ + +I+
Sbjct: 310 TLNKVAMKHPSAVTACNLDLENLVTDSNRSIATLAITTLLKTGSESSIDRLMKQISSFMS 369
Query: 362 XTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFL---GDSNVASAI-DVII 417
E + E++ +++QAI + K+P + +++ L L G AI D II
Sbjct: 370 -------EISDEFKVVVVQAISALCQKYPRKHAVLMNFLFTMLREEGGFEYKRAIVDCII 422
Query: 418 FVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGE 459
IIE N + + + ++ L + + T L ++G+
Sbjct: 423 ---SIIEENTESKETGLSHLCEFIEDCEFTVLATRILHLLGQ 461
>TAIR|locus:2139479 [details] [associations]
symbol:AT4G34450 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005798 "Golgi-associated
vesicle" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0030276 "clathrin binding"
evidence=ISS] [GO:0016020 "membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006487 "protein N-linked
glycosylation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0010498 "proteasomal protein
catabolic process" evidence=RCA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR002553 InterPro:IPR009028
InterPro:IPR013040 InterPro:IPR014863 InterPro:IPR015873
InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041
GO:GO:0005829 GO:GO:0005886 GO:GO:0009506 GO:GO:0009507
GO:GO:0006886 EMBL:CP002687 GenomeReviews:CT486007_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0016192 GO:GO:0005198 EMBL:AL161585
SUPFAM:SSF55711 SUPFAM:SSF49348 Gene3D:3.30.310.30 GO:GO:0030126
EMBL:AL023094 eggNOG:COG5240 HOGENOM:HOG000184434
Gene3D:2.60.40.1480 InterPro:IPR017106 PANTHER:PTHR10261
PIRSF:PIRSF037093 EMBL:AK221839 EMBL:AK226533 IPI:IPI00537691
PIR:T05265 RefSeq:NP_195171.2 UniGene:At.25572
ProteinModelPortal:Q0WW26 SMR:Q0WW26 IntAct:Q0WW26 STRING:Q0WW26
PaxDb:Q0WW26 PRIDE:Q0WW26 ProMEX:Q0WW26 EnsemblPlants:AT4G34450.1
GeneID:829596 KEGG:ath:AT4G34450 TAIR:At4g34450 InParanoid:Q0WW26
OMA:DESIFAN PhylomeDB:Q0WW26 ProtClustDB:CLSN2681006
Genevestigator:Q0WW26 Uniprot:Q0WW26
Length = 886
Score = 125 (49.1 bits), Expect = 0.00059, P = 0.00059
Identities = 86/427 (20%), Positives = 178/427 (41%)
Query: 22 IKEALEGNDV---PAKVDAMKKAIMLLLN-GETLPQLFITIVRY----VLPSEDHTIQKL 73
++EA ND P + + ++ LLN GE+ ++ T V + + S+D ++++
Sbjct: 30 LQEARVFNDPQVDPRRCSQVITKLLYLLNQGESFTKVEATEVFFSVTKLFQSKDTGLRRM 89
Query: 74 LLLYL-EIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPL 132
+ L + E+ +D E+I++ +L ++ + R +R LCR+ + ++ +
Sbjct: 90 VYLIIKELSPSSD-------EVIIVTSSLMKDMNSKIDMYRANAIRVLCRIIDGTLLTQI 142
Query: 133 IPSVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLSTEQDPSAKRNAF 192
+ Q + ++P + A+++ G LL PE++++ + Q+ R+A
Sbjct: 143 ERYLKQAIVDKNPVVSSAALVS---------GLHLLKTNPEIVKRWSNEVQEGIQSRSAL 193
Query: 193 L------MLFTCDQ-DR-AINYLLTHVDRVSEWGELLQMVVL----ELIRKVCRTNXXXX 240
+ +L Q DR A++ L+ + R S L Q +++ ++IR +
Sbjct: 194 VQFHALALLHQIRQNDRLAVSKLVGSLTRGSVRSPLAQCLLIRYTSQVIRDMANHGQSGE 253
Query: 241 XXXXXXXXSLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVL 300
S L + VI E A + L + A T QL LS ++ +
Sbjct: 254 RPFYEFLESCLRHKAEMVILEAARAITELDGVTSRELTPAITVLQLFLSSPRPVLRFAAV 313
Query: 301 DRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINXXXXXXXXXX 360
LN++ +H + + +D+ ++ N I TL I L T +
Sbjct: 314 RTLNKVAMTHPMAVTNCNIDMESLISDQNRSIA--TLAITTLLKTGNESSVERLMKQITN 371
Query: 361 XXTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFL---GDSNVASAI--DV 415
+ + E++ +++ AI S +KFP +++ L + L G AI +
Sbjct: 372 FMSDIAD-----EFKIVVVDAIRSLCVKFPLKYRSLMTFLSNILREEGGFEYKRAIVDSI 426
Query: 416 IIFVREI 422
+ +R+I
Sbjct: 427 VTIIRDI 433
>UNIPROTKB|F1S3C7 [details] [associations]
symbol:AP1G1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0055037 "recycling endosome" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0030136
"clathrin-coated vesicle" evidence=IEA] [GO:0019894 "kinesin
binding" evidence=IEA] [GO:0005802 "trans-Golgi network"
evidence=IEA] [GO:0044431 "Golgi apparatus part" evidence=IEA]
[GO:0030131 "clathrin adaptor complex" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR016024 InterPro:IPR017107
Pfam:PF01602 Pfam:PF02883 PIRSF:PIRSF037094 SMART:SM00809
InterPro:IPR013041 InterPro:IPR008153 GO:GO:0048471 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 GO:GO:0030136 GO:GO:0055037 GO:GO:0005802
GO:GO:0030131 SUPFAM:SSF49348 Gene3D:2.60.40.1230
PANTHER:PTHR22780:SF5 PROSITE:PS50180 GeneTree:ENSGT00390000012618
GO:GO:0044431 OMA:KIWYIDQ EMBL:CU467029 EMBL:FP565416
Ensembl:ENSSSCT00000003036 Uniprot:F1S3C7
Length = 844
Score = 90 (36.7 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 22/78 (28%), Positives = 44/78 (56%)
Query: 95 ILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNLQHRHPYIRRNAIL- 153
+L+ ++N+L H +Y++G+ L L + +E+ L V + L+ + Y+R+ A L
Sbjct: 123 LLMTNCIKNDLNHSTQYVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALC 182
Query: 154 AVMAIYKLPQGEQLLVDA 171
AV I K+P+ ++ + A
Sbjct: 183 AVHVIRKVPELMEMFLPA 200
Score = 85 (35.0 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 53/253 (20%), Positives = 102/253 (40%)
Query: 221 LQMVVLELIRKVCRTNXXXXXXXXXXXXSLLNAPST------AVIYECAGTLVSLSSAPT 274
LQ+ +L L+R + R + + T A++YE T++ + S +
Sbjct: 267 LQVRILRLLRILGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDIKSE-S 325
Query: 275 AIRAAA-NTYSQLLLSQSDNNVKLIVLDRL-NELRSSHRDIMV--DLIMDVLRALNSPNL 330
+R A N + LL+ +D N++ + L L +++ H + I+D L+ L+ +
Sbjct: 326 GLRVLAINILGRFLLN-NDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLD---V 381
Query: 331 DIRRKTLDIVLELITPRNINXXXXXXXXXXXXTQSGELEKNGEYRQMLIQAIHSCAIKFP 390
I+R+ +++ L+ NI S E E + + A A
Sbjct: 382 SIKRRAMELSFALVNGNNIRGMMKELLYFL---DSCEPEFKADCASGIFLAAEKYAPSKR 438
Query: 391 EVASTVVHLLM---DFLGDSNVASAIDVIIFVREIIEMNPKLRVSIITRLLDNFYQIRAA 447
T++ +L ++ D V + I +I +EM+ + +L ++ Q
Sbjct: 439 WHIDTIMRVLTTAGSYVRDDAVPNLIQLIT---NSVEMHAYTVQRLYKAILGDYSQQPLV 495
Query: 448 RVCTCALWIIGEY 460
+V A W IGEY
Sbjct: 496 QV---AAWCIGEY 505
>UNIPROTKB|F1SBR2 [details] [associations]
symbol:AP4B1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005802 "trans-Golgi network" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF09066 PIRSF:PIRSF002291
SMART:SM01020 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565 GO:GO:0005802
GO:GO:0030131 PANTHER:PTHR11134 GeneTree:ENSGT00530000063138
CTD:10717 KO:K12401 OMA:EQFEKTW EMBL:CU651648 RefSeq:XP_003125886.1
UniGene:Ssc.38340 Ensembl:ENSSSCT00000007408 GeneID:100516855
KEGG:ssc:100516855 Uniprot:F1SBR2
Length = 737
Score = 124 (48.7 bits), Expect = 0.00060, P = 0.00060
Identities = 54/220 (24%), Positives = 102/220 (46%)
Query: 14 GTPAIANEIKEALEGNDVPAKV----DAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHT 69
G+ + E+K+AL + A + +++ I + G + +F+ +V+ + D
Sbjct: 5 GSEDVVKELKKALCNPHIQADRLRYRNVIQRVIRHMTQGLDMSGVFMEMVK-ASATVDIV 63
Query: 70 IQKLLLLYLEIIDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEI 128
+KL+ LY+ T A + P++ L+ N L + PN +RG+ LR +C L +
Sbjct: 64 QKKLVYLYM----CTYAP--LKPDLALLAINTLCKDCSDPNPMVRGLALRSMCSLRMPGV 117
Query: 129 IEPLIPSVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKV-LSTEQDPSA 187
E + +L L+ + Y+RR A+L ++ L QG+ VD + E L +QDP
Sbjct: 118 QEYIQQPILNGLRDKASYVRRVAVLGCAKMHNL-QGDSE-VDGALVNELYSLLRDQDPIV 175
Query: 188 KRNAFLMLFTC-DQDRAI-------NYLLTHVDRVSEWGE 219
N L Q+ + ++LL + ++ +WG+
Sbjct: 176 VVNCLRSLEEILKQEGGVVINKPIAHHLLNRMPKLDQWGQ 215
>UNIPROTKB|K7EJ01 [details] [associations]
symbol:AP2B1 "AP-2 complex subunit beta" species:9606 "Homo
sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR026739
Pfam:PF01602 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PANTHER:PTHR11134 EMBL:AC006237 HGNC:HGNC:563 EMBL:AC015911
EMBL:AC004134 Ensembl:ENST00000588116 Uniprot:K7EJ01
Length = 164
Score = 109 (43.4 bits), Expect = 0.00068, P = 0.00068
Identities = 26/101 (25%), Positives = 48/101 (47%)
Query: 369 EKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAI-DVIIFVREIIEMNP 427
E + ++ + ++AI CAIK + A V L+D + + V + + I+ +R+I P
Sbjct: 13 EVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLI-QTKVNYVVQEAIVVIRDIFRKYP 71
Query: 428 KLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVE 468
SII L +N + +WI+GEY + + +
Sbjct: 72 NKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNAD 112
>RGD|1310529 [details] [associations]
symbol:Ap4b1 "adaptor-related protein complex 4, beta 1 subunit"
species:10116 "Rattus norvegicus" [GO:0005802 "trans-Golgi network"
evidence=IEA;ISO] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
InterPro:IPR002553 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM01020 RGD:1310529 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 GO:GO:0005802 GO:GO:0030131 PANTHER:PTHR11134
GeneTree:ENSGT00530000063138 CTD:10717 KO:K12401 OrthoDB:EOG48KR9Z
OMA:EQFEKTW EMBL:CH474015 IPI:IPI00197290 RefSeq:NP_001101179.1
UniGene:Rn.8746 Ensembl:ENSRNOT00000026382 GeneID:310746
KEGG:rno:310746 UCSC:RGD:1310529 NextBio:662544 Uniprot:D4AD35
Length = 739
Score = 123 (48.4 bits), Expect = 0.00078, P = 0.00078
Identities = 61/260 (23%), Positives = 113/260 (43%)
Query: 14 GTPAIANEIKEALEGNDVPAKV----DAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHT 69
G+ + E+K+AL + A + +++ I + G + +F+ +V+ + D
Sbjct: 5 GSEDVVKELKKALCNPHIQADRLRYRNVIQRVIRHMTQGLDMSDVFMEMVK-ASATVDIV 63
Query: 70 IQKLLLLYLEIIDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEI 128
+KL+ LY+ T A + P++ L+ N L + PN +RG+ LR +C L +
Sbjct: 64 QKKLVYLYMG----TYAP--LKPDLALLAINTLCKDCSDPNPMVRGLALRSMCSLRMPGV 117
Query: 129 IEPLIPSVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKV-LSTEQDPSA 187
E + V+ L+ + Y+RR A+L ++ L G+ VD + E L +QDP
Sbjct: 118 QEYIQQPVVNGLRDKASYVRRVAVLGCAKMHNL-HGDSE-VDGALVNELYSLLRDQDPIV 175
Query: 188 KRNAFLMLFTC-DQDRAI-------NYLLTHVDRVSEWGELLQMVVLELIRKVCRTNXXX 239
N L Q+ + ++LL + ++ +WG Q VL + + +
Sbjct: 176 VVNCLRSLEEILKQEGGVVINKPIAHHLLNRMSKLDQWG---QAEVLNFLLRYQPRSEEE 232
Query: 240 XXXXXXXXXSLLNAPSTAVI 259
S L + ST V+
Sbjct: 233 LFDILNLLDSYLKSSSTGVV 252
>UNIPROTKB|Q9Y6B7 [details] [associations]
symbol:AP4B1 "AP-4 complex subunit beta-1" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0005802 "trans-Golgi network" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005215 "transporter activity"
evidence=TAS] Reactome:REACT_11123 InterPro:IPR002553
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF09066 PIRSF:PIRSF002291
SMART:SM01020 GO:GO:0005794 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565
GO:GO:0005215 GO:GO:0005802 eggNOG:COG5096 GO:GO:0030131
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
EMBL:AF092094 EMBL:AB209817 EMBL:AL137856 EMBL:BC014146
IPI:IPI00002150 RefSeq:NP_001240781.1 RefSeq:NP_001240782.1
RefSeq:NP_006585.2 UniGene:Hs.515048 ProteinModelPortal:Q9Y6B7
SMR:Q9Y6B7 DIP:DIP-24209N IntAct:Q9Y6B7 STRING:Q9Y6B7
PhosphoSite:Q9Y6B7 DMDM:126302520 PaxDb:Q9Y6B7 PRIDE:Q9Y6B7
DNASU:10717 Ensembl:ENST00000256658 Ensembl:ENST00000369569
GeneID:10717 KEGG:hsa:10717 UCSC:uc001eeb.3 CTD:10717
GeneCards:GC01M114437 HGNC:HGNC:572 HPA:HPA028162 HPA:HPA028399
HPA:HPA028652 MIM:607245 MIM:614066 neXtProt:NX_Q9Y6B7
Orphanet:280763 PharmGKB:PA24864 HOGENOM:HOG000294128
HOVERGEN:HBG050521 InParanoid:Q9Y6B7 KO:K12401 OMA:RPWKAYL
OrthoDB:EOG48KR9Z PhylomeDB:Q9Y6B7 GenomeRNAi:10717 NextBio:40689
ArrayExpress:Q9Y6B7 Bgee:Q9Y6B7 CleanEx:HS_AP4B1
Genevestigator:Q9Y6B7 GermOnline:ENSG00000134262 Uniprot:Q9Y6B7
Length = 739
Score = 122 (48.0 bits), Expect = 0.00099, P = 0.00099
Identities = 53/220 (24%), Positives = 101/220 (45%)
Query: 14 GTPAIANEIKEALEGNDVPAKV----DAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHT 69
G+ + E+K+AL + A + +++ I + G + +F+ +V+ + D
Sbjct: 5 GSEDVVKELKKALCNPHIQADRLRYRNVIQRVIRYMTQGLDMSGVFMEMVK-ASATVDIV 63
Query: 70 IQKLLLLYLEIIDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEI 128
+KL+ LY+ T A + P++ L+ N L + PN +RG+ LR +C L +
Sbjct: 64 QKKLVYLYM----CTYAP--LKPDLALLAINTLCKDCSDPNPMVRGLALRSMCSLRMPGV 117
Query: 129 IEPLIPSVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKV-LSTEQDPSA 187
E + +L L+ + Y+RR A+L ++ L G+ VD + E L +QDP
Sbjct: 118 QEYIQQPILNGLRDKASYVRRVAVLGCAKMHNL-HGDSE-VDGALVNELYSLLRDQDPIV 175
Query: 188 KRNAFLMLFTC-DQDRAI-------NYLLTHVDRVSEWGE 219
N L Q+ + ++LL + ++ +WG+
Sbjct: 176 VVNCLRSLEEILKQEGGVVINKPIAHHLLNRMSKLDQWGQ 215
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.384 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 867 831 0.00080 122 3 11 22 0.37 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 154
No. of states in DFA: 619 (66 KB)
Total size of DFA: 379 KB (2187 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 68.51u 0.09s 68.60t Elapsed: 00:00:03
Total cpu time: 68.57u 0.09s 68.66t Elapsed: 00:00:03
Start: Fri May 10 00:09:00 2013 End: Fri May 10 00:09:03 2013
WARNINGS ISSUED: 1