Query 002906
Match_columns 867
No_of_seqs 341 out of 452
Neff 4.4
Searched_HMMs 29240
Date Mon Mar 25 06:09:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002906.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002906hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2kfw_A FKBP-type peptidyl-prol 98.3 7.8E-07 2.7E-11 90.3 6.5 63 568-633 18-86 (196)
2 2kr7_A FKBP-type peptidyl-prol 97.0 0.00032 1.1E-08 68.1 3.8 62 567-631 22-89 (151)
3 2dmh_A Myoferlin; beta-sandwic 97.0 0.009 3.1E-07 55.1 13.3 123 334-469 8-138 (140)
4 4dt4_A FKBP-type 16 kDa peptid 97.0 0.00018 6.3E-09 71.5 1.6 64 568-634 40-110 (169)
5 2k8i_A SLYD, peptidyl-prolyl C 97.0 0.00037 1.3E-08 69.3 3.5 61 569-632 19-85 (171)
6 3b7y_A E3 ubiquitin-protein li 96.9 0.011 3.7E-07 55.5 12.7 124 334-464 21-153 (153)
7 1ix5_A FKBP; ppiase, isomerase 96.2 0.0015 5.2E-08 63.4 2.1 62 568-632 17-98 (151)
8 3f04_A Synaptotagmin-1; C2A, c 96.2 0.024 8.1E-07 52.6 10.2 102 335-444 36-142 (143)
9 1rlw_A Phospholipase A2, CALB 96.2 0.045 1.5E-06 49.4 11.6 114 335-464 5-125 (126)
10 3pr9_A FKBP-type peptidyl-prol 96.2 0.00085 2.9E-08 65.9 0.0 61 569-632 17-97 (157)
11 2d8k_A Synaptotagmin VII; exoc 96.2 0.026 9.1E-07 52.3 10.2 106 335-448 28-139 (141)
12 3m7f_B E3 ubiquitin-protein li 96.1 0.051 1.7E-06 52.5 12.0 124 335-465 10-142 (176)
13 3kwu_A MUNC13-1; calcium bindi 96.0 0.11 3.9E-06 48.2 14.0 122 332-463 16-146 (148)
14 2b3r_A Phosphatidylinositol-4- 95.9 0.055 1.9E-06 50.2 11.2 102 335-445 22-131 (134)
15 1v27_A Regulating synaptic mem 95.8 0.073 2.5E-06 48.8 11.2 103 335-447 23-136 (141)
16 3cgm_A SLYD, peptidyl-prolyl C 95.8 0.0028 9.5E-08 62.2 1.7 59 568-632 17-80 (158)
17 2dmg_A KIAA1228 protein; beta- 95.7 0.047 1.6E-06 50.5 9.5 108 335-448 26-139 (142)
18 1wfj_A Putative elicitor-respo 95.6 0.057 1.9E-06 49.5 9.8 117 334-465 11-131 (136)
19 3prb_A FKBP-type peptidyl-prol 95.6 0.0026 8.9E-08 66.2 0.8 61 569-632 17-97 (231)
20 1rsy_A Synaptotagmin I; calciu 95.5 0.065 2.2E-06 50.4 9.9 103 335-445 44-151 (152)
21 2enp_A B/K protein; C2 type 1, 95.5 0.06 2E-06 50.2 9.5 105 335-447 28-144 (147)
22 1gmi_A Protein kinase C, epsil 95.4 0.1 3.5E-06 48.1 10.8 114 335-464 8-133 (136)
23 3fdw_A Synaptotagmin-like prot 95.3 0.042 1.4E-06 51.4 8.0 108 335-451 25-141 (148)
24 1a25_A CALB, protein kinase C 95.3 0.093 3.2E-06 49.1 10.3 102 335-445 33-140 (149)
25 2ep6_A MCTP2 protein; beta san 95.3 0.16 5.3E-06 46.6 11.6 120 327-462 9-130 (133)
26 2nq3_A Itchy homolog E3 ubiqui 95.3 0.096 3.3E-06 51.3 10.7 103 335-445 38-143 (173)
27 3fbk_A RGS3, RGP3, regulator o 95.2 0.074 2.5E-06 50.2 9.2 105 335-446 29-139 (153)
28 2r83_A Synaptotagmin-1; C2A-C2 95.1 0.25 8.7E-06 50.6 13.9 122 334-464 20-147 (284)
29 3pyc_A E3 ubiquitin-protein li 95.0 0.18 6E-06 46.1 11.1 124 333-461 5-130 (132)
30 2fk9_A Protein kinase C, ETA t 94.8 0.14 4.8E-06 49.9 10.3 104 335-445 31-146 (157)
31 3rdl_A Protein kinase C alpha 94.8 0.14 4.7E-06 46.7 9.7 103 334-445 17-125 (137)
32 2q3x_A Regulating synaptic mem 94.8 0.082 2.8E-06 51.1 8.5 106 334-447 31-142 (171)
33 1ugk_A Synaptotagmin IV, KIAA1 94.7 0.27 9.4E-06 45.2 11.6 105 335-446 24-135 (138)
34 1w15_A Synaptotagmin IV; metal 94.5 0.13 4.5E-06 48.2 9.0 105 334-444 31-152 (153)
35 3n5a_A Synaptotagmin-7; calciu 94.3 0.19 6.6E-06 45.7 9.4 104 335-444 18-138 (138)
36 2bwq_A Regulating synaptic mem 94.3 0.22 7.4E-06 45.0 9.6 99 335-443 20-129 (129)
37 2cm5_A Rabphilin-3A; protein t 94.1 0.22 7.4E-06 47.5 9.7 106 335-446 39-161 (166)
38 1tjx_A Similar to synaptotagmi 94.0 0.23 8E-06 46.9 9.7 105 335-445 27-148 (159)
39 2z0u_A WW domain-containing pr 93.6 0.37 1.3E-05 46.2 10.4 103 335-444 45-155 (155)
40 1rh8_A Piccolo protein; beta-s 93.6 0.21 7E-06 46.0 8.2 106 334-447 19-141 (142)
41 3o5q_A Peptidyl-prolyl CIS-tra 93.4 0.031 1.1E-06 52.2 2.4 49 569-620 51-104 (128)
42 1r9h_A FKB-6, FK506 binding pr 93.0 0.054 1.8E-06 51.2 3.2 49 568-619 45-98 (135)
43 2pbc_A FK506-binding protein 2 92.9 0.063 2.2E-06 47.7 3.5 50 568-620 21-75 (102)
44 3o5e_A Peptidyl-prolyl CIS-tra 92.9 0.051 1.7E-06 51.9 3.0 49 569-620 67-120 (144)
45 2vn1_A 70 kDa peptidylprolyl i 92.3 0.072 2.5E-06 49.6 3.2 50 568-620 50-104 (129)
46 1yat_A FK506 binding protein; 91.8 0.1 3.5E-06 47.3 3.4 51 568-621 37-92 (113)
47 2ppn_A FK506-binding protein 1 91.6 0.077 2.6E-06 47.5 2.3 50 569-621 32-86 (107)
48 1wfm_A Synaptotagmin XIII; C2 91.4 0.89 3E-05 42.1 9.5 103 335-447 28-135 (138)
49 2chd_A Rabphilin-3A, exophilin 91.2 1.5 5E-05 40.3 10.7 102 335-444 31-140 (142)
50 4dip_A Peptidyl-prolyl CIS-tra 91.0 0.13 4.4E-06 47.5 3.4 52 567-621 44-102 (125)
51 3kz7_A FK506-binding protein 3 91.0 0.12 4.3E-06 47.1 3.2 50 568-620 35-96 (119)
52 2lgo_A FKBP; infectious diseas 90.6 0.13 4.6E-06 48.3 3.0 51 568-621 55-110 (130)
53 2y78_A Peptidyl-prolyl CIS-tra 90.6 0.15 5E-06 48.2 3.3 51 568-621 58-113 (133)
54 2r83_A Synaptotagmin-1; C2A-C2 90.0 1 3.5E-05 46.1 9.4 106 334-445 151-273 (284)
55 3b7x_A FK506-binding protein 6 89.9 0.14 4.7E-06 48.3 2.5 52 567-621 56-112 (134)
56 2cjt_A UNC-13 homolog A, MUNC1 88.5 4.4 0.00015 37.5 11.6 95 335-442 7-102 (131)
57 1hxv_A Trigger factor; FKBP fo 87.9 0.2 6.7E-06 46.3 2.0 48 569-620 45-96 (113)
58 2lkn_A AH receptor-interacting 87.7 0.18 6.1E-06 50.0 1.7 50 567-619 43-97 (165)
59 3uf8_A Ubiquitin-like protein 87.3 0.3 1E-05 49.7 3.0 51 568-621 134-189 (209)
60 2f4e_A ATFKBP42; FKBP-like, al 87.0 0.46 1.6E-05 47.2 4.2 52 567-621 79-136 (180)
61 1dqv_A Synaptotagmin III; beta 86.5 5.7 0.0002 41.2 12.4 122 334-464 21-149 (296)
62 1u79_A FKBP-type peptidyl-prol 86.1 0.32 1.1E-05 45.4 2.4 51 568-621 42-103 (129)
63 2d9f_A FK506-binding protein 8 86.1 0.25 8.5E-06 46.6 1.6 48 569-621 50-100 (135)
64 2awg_A 38 kDa FK-506 binding p 85.1 0.39 1.3E-05 43.9 2.4 49 568-621 45-96 (118)
65 3l9b_A Otoferlin; C2-domain, b 85.0 4.7 0.00016 39.3 10.0 116 333-467 21-143 (144)
66 1q1c_A FK506-binding protein 4 84.5 0.62 2.1E-05 49.2 3.9 49 568-619 82-135 (280)
67 3jxv_A 70 kDa peptidyl-prolyl 84.2 0.62 2.1E-05 50.5 3.8 49 569-620 276-330 (356)
68 1kt0_A FKBP51, 51 kDa FK506-bi 83.3 0.69 2.3E-05 50.9 3.8 49 568-619 62-115 (457)
69 2cjs_A UNC-13 homolog A, MUNC1 82.9 5.5 0.00019 38.7 9.6 84 335-430 16-100 (167)
70 3oe2_A Peptidyl-prolyl CIS-tra 81.9 0.63 2.2E-05 48.0 2.7 48 568-620 147-196 (219)
71 2jwx_A FKBP38NTD, FK506-bindin 81.4 0.59 2E-05 45.7 2.1 49 568-621 75-126 (157)
72 1dqv_A Synaptotagmin III; beta 80.8 1.1 3.8E-05 46.6 4.1 107 334-447 153-278 (296)
73 2if4_A ATFKBP42; FKBP-like, al 80.7 0.91 3.1E-05 47.8 3.4 52 566-620 78-135 (338)
74 1jvw_A Macrophage infectivity 78.8 0.76 2.6E-05 45.3 2.0 50 568-620 68-120 (167)
75 3jzy_A Intersectin 2; C2 domai 76.6 7.3 0.00025 43.2 9.3 107 331-445 385-495 (510)
76 1cjy_A CPLA2, protein (cytosol 74.9 7.9 0.00027 46.5 9.5 103 333-445 18-127 (749)
77 1q6h_A FKBP-type peptidyl-prol 74.5 1.6 5.3E-05 45.1 2.9 50 569-621 152-204 (224)
78 1fd9_A Protein (macrophage inf 73.7 1.4 4.8E-05 45.1 2.3 50 569-621 137-189 (213)
79 3jxv_A 70 kDa peptidyl-prolyl 72.7 0.74 2.5E-05 49.9 0.0 49 569-620 43-96 (356)
80 1djx_A PLC-D1, phosphoinositid 66.2 34 0.0012 40.1 12.0 123 328-463 492-623 (624)
81 3nsj_A Perforin-1; pore formin 64.5 77 0.0026 36.6 14.4 123 332-476 393-518 (540)
82 1w26_A Trigger factor, TF; cha 61.6 6.1 0.00021 44.2 4.5 56 569-627 173-236 (432)
83 1q1c_A FK506-binding protein 4 60.5 4.6 0.00016 42.6 3.1 46 569-620 199-250 (280)
84 2kfw_A FKBP-type peptidyl-prol 55.8 7.8 0.00027 39.2 3.7 14 622-635 108-121 (196)
85 3bxj_A RAS GTPase-activating p 53.5 3.2 0.00011 46.9 0.5 99 335-444 13-116 (483)
86 3pfq_A PKC-B, PKC-beta, protei 40.2 79 0.0027 36.8 9.4 101 335-445 174-281 (674)
87 2hm3_A Nematocyst outer WALL a 39.6 3.2 0.00011 29.9 -1.4 14 753-766 11-24 (31)
88 1p5q_A FKBP52, FK506-binding p 36.7 21 0.00072 37.2 3.5 46 569-620 56-107 (336)
89 1t11_A Trigger factor, TF; hel 31.7 37 0.0013 37.4 4.6 58 568-628 175-240 (392)
90 2pk2_A Cyclin-T1, protein TAT; 21.2 20 0.00069 39.1 0.0 46 700-751 269-314 (358)
No 1
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=98.27 E-value=7.8e-07 Score=90.32 Aligned_cols=63 Identities=14% Similarity=0.223 Sum_probs=57.9
Q ss_pred CCCcceeec-CCcceEEecCcccc---ccccccccccccCcceeeeeeCCCCcccce--eEEEeccCccEEE
Q 002906 568 KEGHLFELL-GNRMINLFPGRKLD---YEHKHCQKQRSEEDFVTAIEFSPADPYGKA--IALLDLKSGVIKV 633 (867)
Q Consensus 568 ~dg~l~El~-~~~Pl~fi~Gr~~~---fE~k~~~~~~~ge~FVT~V~~spe~pYGea--~aLldL~ke~FeV 633 (867)
.+|++|+.+ +.+|+.|+.|.+++ ||+. +.+++.|+.+ .|+++|+++||++ .+|+.++++.|.-
T Consensus 18 ~dG~~fdss~~~~P~~f~lG~g~vipG~eea-L~Gm~vGe~~--~v~Ippe~aYGe~~~~lV~~vp~~~f~~ 86 (196)
T 2kfw_A 18 EDGVLVDESPVSAPLDYLHGHGSLISGLETA-LEGHEVGDKF--DVAVGANDAYGQYDENLVQRVPKDVFMG 86 (196)
T ss_dssp TTTEEEEECCTTSCCEEESSSSSSCHHHHHH-HSSSCTTCEE--EEECSTTTTSSCCCTTTCEEECGGGCCC
T ss_pred CCCCEEEecCCCCCEEEEECCCCcchHHHHH-HcCCCCCCEE--EEEeCcHHhcCCCChhhEEEEEHHHCCC
Confidence 579999998 66999999998877 9999 9999999999 9999999999999 8999999999953
No 2
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=97.04 E-value=0.00032 Score=68.15 Aligned_cols=62 Identities=13% Similarity=0.156 Sum_probs=57.5
Q ss_pred CCCCcceeec-CCcceEEecCcccc---ccccccccccccCcceeeeeeCCCCcccce--eEEEeccCccE
Q 002906 567 SKEGHLFELL-GNRMINLFPGRKLD---YEHKHCQKQRSEEDFVTAIEFSPADPYGKA--IALLDLKSGVI 631 (867)
Q Consensus 567 s~dg~l~El~-~~~Pl~fi~Gr~~~---fE~k~~~~~~~ge~FVT~V~~spe~pYGea--~aLldL~ke~F 631 (867)
.++|.+|+.+ +.+|+.|..|.++. ||.. +.+++.|+.+ .|.++|+++||++ .+++.++++.|
T Consensus 22 ~~dG~~fdss~~~~p~~f~~G~g~vipg~e~a-L~gm~~Ge~~--~v~ipp~~aYG~~~~~~v~~v~~~~f 89 (151)
T 2kr7_A 22 QGSSIVLDSNISKEPLEFIIGTNQIIAGLEKA-VLKAQIGEWE--EVVIAPEEAYGVYESSYLQEVPRDQF 89 (151)
T ss_dssp SSCSCEEEESTTTCCEEEETTCCCSCHHHHHH-HTTCCBTCEE--EEEECGGGTTCSSCSCEEEEEEGGGG
T ss_pred CCCCCEEEeCCCCcCEEEEECCCCccHHHHHH-HcCCCCCCEE--EEEEecHHHcCCCCcceEEEEcHHHc
Confidence 3489999999 67999999998877 9999 9999999999 9999999999999 99999999999
No 3
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.03 E-value=0.009 Score=55.12 Aligned_cols=123 Identities=15% Similarity=0.224 Sum_probs=80.7
Q ss_pred EEEEEeeeccCCCccccCCCceEEEEeccCCCcccccccceeeeecccceeeEEEEee-----ecceEEEEEEeeCCCcc
Q 002906 334 EVFVEIVAVKNLPEDHKDKGDLFVFFSKSQPDIFFNAKQKLTILSKSGMKQVASFQCE-----ATGELLFELVSHSTSKI 408 (867)
Q Consensus 334 ev~~~iv~~~n~p~~~k~~~~~fvr~~~~q~d~~~~~~~~~~~~s~~~~k~~~~~qCE-----~t~~l~lel~~~~~~~~ 408 (867)
.+.|.|+.++||+.......+-||.++-.. .+ .+ ++.+.=+.++-|+....|... ....|.|+|..+..
T Consensus 8 ~L~v~v~~a~~L~~~~~g~~dpyv~v~~~~-~~-~k-T~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~--- 81 (140)
T 2dmh_A 8 MLRVIVESASNIPKTKFGKPDPIVSVIFKD-EK-KK-TKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFET--- 81 (140)
T ss_dssp EEEEEEEEEESCCCCSSSCCCEEEEEECSS-CE-EE-CCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTC---
T ss_pred EEEEEEEEeeCCCCCCCCCCCeEEEEEECC-Ee-EE-eeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCC---
Confidence 356778899999865323467899988331 11 11 111111246778877777764 25788899887654
Q ss_pred cccCCccccceeeeecccccCCCCcceEeEEEe---eccCCCCCCCCCeeEEEEEeecCCCCCc
Q 002906 409 PMTGASKTMGTASLSLQNFISPISKLAVEQWFD---LVPRSGNVSSKPISLRIAVSFTIPTLAP 469 (867)
Q Consensus 409 ~~~k~sk~~g~~s~~~~dll~~~~~Ls~e~w~~---l~~~~~~~~~~p~~lrv~~S~TpPv~Ap 469 (867)
+.+..+||.+.|++++|... -..+.|++ |....+. ...=+|+|.+++.||...|
T Consensus 82 --~~~~~~lG~~~i~l~~l~~~---~~~~~w~~l~~l~~~~~~--~~~G~l~l~~~~~p~~~~~ 138 (140)
T 2dmh_A 82 --IGQNKLIGTATVALKDLTGD---QSRSLPYKLISLLNEKGQ--DTGATIDLVIGYDPPSGPS 138 (140)
T ss_dssp --SSSCCCCEEEEEEGGGTCSS---SCEEEEEEEEEEECTTCC--EEEEEEEEEEEECCCBSSS
T ss_pred --CCCCceEEEEEEEHHHhccC---CCceeEEeeeeccCCCCC--CCCCEEEEEEEEECCCCCC
Confidence 45678999999999999754 35688988 5433221 2224888999999876643
No 4
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=96.99 E-value=0.00018 Score=71.48 Aligned_cols=64 Identities=9% Similarity=0.062 Sum_probs=58.0
Q ss_pred CCCcceeec-C-CcceEEecCcccc---ccccccccccccCcceeeeeeCCCCcccce--eEEEeccCccEEEc
Q 002906 568 KEGHLFELL-G-NRMINLFPGRKLD---YEHKHCQKQRSEEDFVTAIEFSPADPYGKA--IALLDLKSGVIKVK 634 (867)
Q Consensus 568 ~dg~l~El~-~-~~Pl~fi~Gr~~~---fE~k~~~~~~~ge~FVT~V~~spe~pYGea--~aLldL~ke~FeVd 634 (867)
.+|.+||.+ + ++|+.|+.|.+.. ||+. +.+++.|+.+ .|.++|+++||++ ..++.++++.|..+
T Consensus 40 ~dG~vfDss~~~~~P~~f~lG~g~vipG~eea-L~gm~~Ge~~--~v~Ipp~~AYG~~~~~lv~~vp~~~f~~~ 110 (169)
T 4dt4_A 40 DDGTTAESTRNNGKPALFRLGDASLSEGLEQH-LLGLKVGDKT--TFSLEPDAAFGVPSPDLIQYFSRREFMDA 110 (169)
T ss_dssp TTSCEEEEHHHHTSCEEEETTSSSSCHHHHHH-HTTCCTTCEE--EEEECGGGTTCCCCGGGEEEEEGGGGTTT
T ss_pred CCCCEEEecCCCCCCEEEEECCCCccHHHHHH-HcCCCCCCEE--EEEEChHHhcCCCChHHEEEeCHHHCCCc
Confidence 379999998 4 5999999998877 9999 9999999999 9999999999999 89999999998644
No 5
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=96.96 E-value=0.00037 Score=69.27 Aligned_cols=61 Identities=15% Similarity=0.242 Sum_probs=56.7
Q ss_pred CCcceeec-CCcceEEecCcccc---ccccccccccccCcceeeeeeCCCCcccce--eEEEeccCccEE
Q 002906 569 EGHLFELL-GNRMINLFPGRKLD---YEHKHCQKQRSEEDFVTAIEFSPADPYGKA--IALLDLKSGVIK 632 (867)
Q Consensus 569 dg~l~El~-~~~Pl~fi~Gr~~~---fE~k~~~~~~~ge~FVT~V~~spe~pYGea--~aLldL~ke~Fe 632 (867)
+|++|+.+ +.+|+.|..|.++. ||+. +.+++.|+.+ .|+++|+++||++ .+++.++++.|.
T Consensus 19 dG~~fdss~~~~P~~f~lG~g~vipG~eea-L~Gm~~Ge~~--~v~ippe~aYG~~~~~~v~~v~~~~f~ 85 (171)
T 2k8i_A 19 DGVLVDESPVSAPLDYLHGHGSLISGLETA-LEGHEVGDKF--DVAVGANDAYGQYDENLVQRVPKDVFM 85 (171)
T ss_dssp TSCEEEECCSSSCEEEETTSCSSCSHHHHH-HTTCCTTCEE--EEEEETTTSSCCCCTTSEEEEEGGGGT
T ss_pred CCCEEeeccCCcCEEEEECCCCcchHHHHH-HcCCCCCCEE--EEEECcHHhcCCCChhhEEEeeHHHCC
Confidence 89999998 66899999998877 9999 9999999999 9999999999999 899999999985
No 6
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=96.88 E-value=0.011 Score=55.53 Aligned_cols=124 Identities=18% Similarity=0.191 Sum_probs=78.9
Q ss_pred EEEEEeeeccCCCcccc-CCCceEEEEeccC-CC---cccccccceeeeecccceeeEEEEeee-cceEEEEEEeeCCCc
Q 002906 334 EVFVEIVAVKNLPEDHK-DKGDLFVFFSKSQ-PD---IFFNAKQKLTILSKSGMKQVASFQCEA-TGELLFELVSHSTSK 407 (867)
Q Consensus 334 ev~~~iv~~~n~p~~~k-~~~~~fvr~~~~q-~d---~~~~~~~~~~~~s~~~~k~~~~~qCE~-t~~l~lel~~~~~~~ 407 (867)
.+.|.|+.++||+.... ...+-||+++-.. .+ ... -+..+.=+.++.|++...|.... ...|.|+|..+..
T Consensus 21 ~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~-kT~v~~~t~nP~wne~f~f~v~~~~~~l~~~V~d~d~-- 97 (153)
T 3b7y_A 21 IVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSV-QTKTIKKSLNPKWNEEILFRVHPQQHRLLFEVFDENR-- 97 (153)
T ss_dssp EEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEE-ECCCCSSCSSCCCCEEEEEEECTTTCEEEEEEEECCS--
T ss_pred EEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceee-eCccccCCCCCCCCCEEEEEecCCCCEEEEEEEECCC--
Confidence 46667789999986432 2357899988542 22 111 11111123567888766666653 5689999887753
Q ss_pred ccccCCccccceeeeecccccCCCCcc--e-EeEEEeeccCCCCCCCCCeeEEEEEeecC
Q 002906 408 IPMTGASKTMGTASLSLQNFISPISKL--A-VEQWFDLVPRSGNVSSKPISLRIAVSFTI 464 (867)
Q Consensus 408 ~~~~k~sk~~g~~s~~~~dll~~~~~L--s-~e~w~~l~~~~~~~~~~p~~lrv~~S~Tp 464 (867)
+.+...||.+.|++++|....... . .++|+.|.+.+. .+...=.|+|.+++.|
T Consensus 98 ---~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~-~~~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 98 ---LTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSH-KSRVKGYLRLKMTYLP 153 (153)
T ss_dssp ---SSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSST-TCCCCSEEEEEEEECC
T ss_pred ---CcCCCeeEEEEEEHHHcccCCCcccccccccccccccccC-CCCcceEEEEEEEEeC
Confidence 557889999999999998765332 2 259999987653 2233458888888876
No 7
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=96.22 E-value=0.0015 Score=63.37 Aligned_cols=62 Identities=11% Similarity=0.299 Sum_probs=54.7
Q ss_pred CCCcceeec-C--------------CcceEEecCcccc---ccccccccccccCcceeeeeeCCCCcccce--eEEEecc
Q 002906 568 KEGHLFELL-G--------------NRMINLFPGRKLD---YEHKHCQKQRSEEDFVTAIEFSPADPYGKA--IALLDLK 627 (867)
Q Consensus 568 ~dg~l~El~-~--------------~~Pl~fi~Gr~~~---fE~k~~~~~~~ge~FVT~V~~spe~pYGea--~aLldL~ 627 (867)
.+|.+|+.+ . ..|+.|..|.++. ||.. +.+++.|+.+ .|.++|+++||++ .+++.++
T Consensus 17 ~dG~~fdss~~~~a~~~g~~~~~~~~~P~~f~~G~g~vi~G~eea-L~gm~~Ge~~--~v~ipp~~aYG~~~~~~v~~v~ 93 (151)
T 1ix5_A 17 ESGDVFDTSIEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGFEEA-VLDMEVGDEK--TVKIPAEKAYGNRNEMLIQKIP 93 (151)
T ss_dssp TTSCCCEESCHHHHHHHTCCCSSCCCCCEEEETTTTCSCHHHHHH-HHTCCTTCCC--EEEECTTTSSCSCCSTTBCCEE
T ss_pred CCCCEEEecchhhcccccccccccCCCCEEEEECCCChhHHHHHH-HcCCCCCCEE--EEEECcHHHCCCCCccEEEEEE
Confidence 578889887 2 3699999998877 9999 9999999999 9999999999999 7888888
Q ss_pred CccEE
Q 002906 628 SGVIK 632 (867)
Q Consensus 628 ke~Fe 632 (867)
++.|.
T Consensus 94 ~~~f~ 98 (151)
T 1ix5_A 94 RDAFK 98 (151)
T ss_dssp THHHH
T ss_pred HHHcC
Confidence 88874
No 8
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=96.22 E-value=0.024 Score=52.58 Aligned_cols=102 Identities=13% Similarity=0.128 Sum_probs=67.2
Q ss_pred EEEEeeeccCCCcccc-CCCceEEEEeccCCCcccccccceeeeecccceeeEEEEeee----cceEEEEEEeeCCCccc
Q 002906 335 VFVEIVAVKNLPEDHK-DKGDLFVFFSKSQPDIFFNAKQKLTILSKSGMKQVASFQCEA----TGELLFELVSHSTSKIP 409 (867)
Q Consensus 335 v~~~iv~~~n~p~~~k-~~~~~fvr~~~~q~d~~~~~~~~~~~~s~~~~k~~~~~qCE~----t~~l~lel~~~~~~~~~ 409 (867)
+.|.|+.++||+.... ...+-||++.-...+.-..-+..+.=+.++.|++...|.... ...|.|+|..+..
T Consensus 36 L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~---- 111 (143)
T 3f04_A 36 LLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDR---- 111 (143)
T ss_dssp EEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCS----
T ss_pred EEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEeCCC----
Confidence 4566789999986522 346789998753222111111222223567788766676652 2678888877653
Q ss_pred ccCCccccceeeeecccccCCCCcceEeEEEeecc
Q 002906 410 MTGASKTMGTASLSLQNFISPISKLAVEQWFDLVP 444 (867)
Q Consensus 410 ~~k~sk~~g~~s~~~~dll~~~~~Ls~e~w~~l~~ 444 (867)
+.+...||.+.|++++|... -..+.|++|.|
T Consensus 112 -~~~~~~iG~~~i~l~~l~~~---~~~~~W~~L~~ 142 (143)
T 3f04_A 112 -FSKHDIIGEFKVPMNTVDFG---HVTEEWRDLQS 142 (143)
T ss_dssp -SSCCEEEEEEEEEGGGCCTT---SCEEEEEECBC
T ss_pred -CCCCceEEEEEEEHHHccCC---CCcceEEECcC
Confidence 55778999999999999753 36789999976
No 9
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=96.18 E-value=0.045 Score=49.40 Aligned_cols=114 Identities=13% Similarity=0.099 Sum_probs=74.3
Q ss_pred EEEEeeeccCCCcc----ccCCCceEEEEeccCCC-cccccccceeeeecccceeeEEEEee--ecceEEEEEEeeCCCc
Q 002906 335 VFVEIVAVKNLPED----HKDKGDLFVFFSKSQPD-IFFNAKQKLTILSKSGMKQVASFQCE--ATGELLFELVSHSTSK 407 (867)
Q Consensus 335 v~~~iv~~~n~p~~----~k~~~~~fvr~~~~q~d-~~~~~~~~~~~~s~~~~k~~~~~qCE--~t~~l~lel~~~~~~~ 407 (867)
+.|.|++++|||.. .....+-||.++-.... ...+ ++.+.=+.+|.|.+...|... ....|.|+|..+..
T Consensus 5 L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~k-T~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~-- 81 (126)
T 1rlw_A 5 FTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKR-TRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY-- 81 (126)
T ss_dssp EEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEE-CCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCS--
T ss_pred EEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEE-ccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCC--
Confidence 56778999999972 11236789998844221 1111 111111346788877777774 35678888887653
Q ss_pred ccccCCccccceeeeecccccCCCCcceEeEEEeeccCCCCCCCCCeeEEEEEeecC
Q 002906 408 IPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNVSSKPISLRIAVSFTI 464 (867)
Q Consensus 408 ~~~~k~sk~~g~~s~~~~dll~~~~~Ls~e~w~~l~~~~~~~~~~p~~lrv~~S~Tp 464 (867)
++ ...||.+.|++++|.. .-..+.|++|.+. ....|++.+...|
T Consensus 82 ---~~-~~~iG~~~i~l~~l~~---~~~~~~~~~L~~~------~~g~i~~~le~~~ 125 (126)
T 1rlw_A 82 ---VM-DETLGTATFTVSSMKV---GEKKEVPFIFNQV------TEMVLEMSLEVAS 125 (126)
T ss_dssp ---SC-CEEEEEEEEEGGGSCT---TCEEEEEEEETTT------EEEEEEEEEECCC
T ss_pred ---CC-CceeEEEEEEHHHccC---CCcEEEEEEcCCC------ceEEEEEEEEeCC
Confidence 33 7799999999999974 4578999999863 2255555555444
No 10
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=96.16 E-value=0.00085 Score=65.86 Aligned_cols=61 Identities=15% Similarity=0.282 Sum_probs=54.5
Q ss_pred CCcceeec-C--------------CcceEEecCcccc---ccccccccccccCcceeeeeeCCCCcccce--eEEEeccC
Q 002906 569 EGHLFELL-G--------------NRMINLFPGRKLD---YEHKHCQKQRSEEDFVTAIEFSPADPYGKA--IALLDLKS 628 (867)
Q Consensus 569 dg~l~El~-~--------------~~Pl~fi~Gr~~~---fE~k~~~~~~~ge~FVT~V~~spe~pYGea--~aLldL~k 628 (867)
+|.+|+.+ . .+|+.|..|.+.. ||+. +.+++.|+.+ .|.++|+++||++ ..++.+++
T Consensus 17 dG~vfDss~~~~a~~~g~~~~~~~~~P~~f~vG~g~vi~G~eea-L~gm~~Ge~~--~v~Ipp~~aYG~~~~~~V~~v~~ 93 (157)
T 3pr9_A 17 DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEA-ILEMDVGEER--EVVLPPEKAFGKRDPSKIKLIPL 93 (157)
T ss_dssp TTEEEEESCHHHHHHHTCCCTTSCCSCEEEETTSSSSCHHHHHH-HHHCCTTCEE--EEEECGGGTTCCCCGGGEEEEEH
T ss_pred CCEEEEeccccccccccccccccCCCCEEEEECCCcHHHHHHHH-HcCCCCCCEE--EEEECcHHhcCCCChHhEEEcCH
Confidence 78899887 3 2799999998777 9999 9999999999 9999999999999 88899999
Q ss_pred ccEE
Q 002906 629 GVIK 632 (867)
Q Consensus 629 e~Fe 632 (867)
+.|.
T Consensus 94 ~~f~ 97 (157)
T 3pr9_A 94 SEFT 97 (157)
T ss_dssp HHHH
T ss_pred HHCC
Confidence 8774
No 11
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.16 E-value=0.026 Score=52.25 Aligned_cols=106 Identities=15% Similarity=0.144 Sum_probs=69.8
Q ss_pred EEEEeeeccCCCcccc-CCCceEEEEeccCCCcccccccceeeeecccceeeEEEEee-----ecceEEEEEEeeCCCcc
Q 002906 335 VFVEIVAVKNLPEDHK-DKGDLFVFFSKSQPDIFFNAKQKLTILSKSGMKQVASFQCE-----ATGELLFELVSHSTSKI 408 (867)
Q Consensus 335 v~~~iv~~~n~p~~~k-~~~~~fvr~~~~q~d~~~~~~~~~~~~s~~~~k~~~~~qCE-----~t~~l~lel~~~~~~~~ 408 (867)
+.|.|+.++|||.... ...+-||+++-..-+....-++.+.=+.+|.|.+...|.-- ....|.|+|..+..
T Consensus 28 L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~--- 104 (141)
T 2d8k_A 28 LTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDYDR--- 104 (141)
T ss_dssp EEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEEECCS---
T ss_pred EEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEEECCC---
Confidence 5666789999986532 23578999885321111111111222346788866666531 24678999887753
Q ss_pred cccCCccccceeeeecccccCCCCcceEeEEEeeccCCCC
Q 002906 409 PMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGN 448 (867)
Q Consensus 409 ~~~k~sk~~g~~s~~~~dll~~~~~Ls~e~w~~l~~~~~~ 448 (867)
+.+...||.+.|++++|.... ..+.|++|.+.+..
T Consensus 105 --~~~~~~iG~~~i~l~~l~~~~---~~~~W~~L~~~~~~ 139 (141)
T 2d8k_A 105 --FSRNDPIGEVSIPLNKVDLTQ---MQTFWKDLKPSGPS 139 (141)
T ss_dssp --SSSCEEEEEEEEETTTSCTTS---CEEEEECCEECCCC
T ss_pred --CCCCcEEEEEEEEhhhhcCCC---CccEEEECcCCCCC
Confidence 456789999999999998642 67899999887543
No 12
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=96.06 E-value=0.051 Score=52.51 Aligned_cols=124 Identities=17% Similarity=0.195 Sum_probs=75.2
Q ss_pred EEEEeeeccCCCcccc-CCCceEEEEeccCC-Cc---ccccccceeeeecccceeeEEEEeee-cceEEEEEEeeCCCcc
Q 002906 335 VFVEIVAVKNLPEDHK-DKGDLFVFFSKSQP-DI---FFNAKQKLTILSKSGMKQVASFQCEA-TGELLFELVSHSTSKI 408 (867)
Q Consensus 335 v~~~iv~~~n~p~~~k-~~~~~fvr~~~~q~-d~---~~~~~~~~~~~s~~~~k~~~~~qCE~-t~~l~lel~~~~~~~~ 408 (867)
+.|.|+.++||+.... ...+-||.++-... +. .+ -+..+.=+.++.|++...|...+ ...|.|+|.-+..
T Consensus 10 L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~-kT~v~~~t~nP~Wne~f~f~v~~~~~~L~~~V~d~d~--- 85 (176)
T 3m7f_B 10 VRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSV-QTKTIKKSLNPKWNEEILFRVLPQRHRILFEVFDENR--- 85 (176)
T ss_dssp EEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEE-ECCCCSSCSSCEEEEEEEEEECTTTCEEEEEEEECC----
T ss_pred EEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccce-eCceECCCCCCcccceEEEEEcCCCCEEEEEEEECCC---
Confidence 5666789999986422 23678998874421 11 11 11111223567788777777764 4588999886643
Q ss_pred cccCCccccceeeeecccccCCCCcc---eEeEEEeeccCCCCCCCCCeeEEEEEeecCC
Q 002906 409 PMTGASKTMGTASLSLQNFISPISKL---AVEQWFDLVPRSGNVSSKPISLRIAVSFTIP 465 (867)
Q Consensus 409 ~~~k~sk~~g~~s~~~~dll~~~~~L---s~e~w~~l~~~~~~~~~~p~~lrv~~S~TpP 465 (867)
+.+..+||.+.|++.+|......+ ...+|+.|.+.... +...=.|+|.++++|.
T Consensus 86 --~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~-~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 86 --LTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHK-SRVKGYLRLKMTYLPK 142 (176)
T ss_dssp -----CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTT-CCCCSEEEEEEEECC-
T ss_pred --CCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCC-CccCEEEEEEEEEEeC
Confidence 456789999999999998764221 12279999876432 2233588888888875
No 13
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=96.04 E-value=0.11 Score=48.21 Aligned_cols=122 Identities=10% Similarity=0.258 Sum_probs=76.5
Q ss_pred EEEEEEEeeeccCCCccc-cCCCceEEEEeccCCCcccccccceeeeecccceeeEEEEee-ecceEEEEEEeeCCC---
Q 002906 332 IVEVFVEIVAVKNLPEDH-KDKGDLFVFFSKSQPDIFFNAKQKLTILSKSGMKQVASFQCE-ATGELLFELVSHSTS--- 406 (867)
Q Consensus 332 vvev~~~iv~~~n~p~~~-k~~~~~fvr~~~~q~d~~~~~~~~~~~~s~~~~k~~~~~qCE-~t~~l~lel~~~~~~--- 406 (867)
.-.+.|.|+.++|||... ....+-||.++-. . ..+ -++.+.=+.+|.|.....|... +...|.|++.-+...
T Consensus 16 ~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~-~-~~~-kT~~~~~t~nP~Wne~f~f~v~~~~~~l~~~v~d~d~~~~~ 92 (148)
T 3kwu_A 16 SAKISITVVCAQGLQAKDKTGSSDPYVTVQVG-K-TKK-RTKTIYGNLNPVWEENFHFECHNSSDRIKVRVLDEDDDIKS 92 (148)
T ss_dssp CEEEEEEEEEEESCCCCSTTSCCCEEEEEEET-T-EEE-ECCCCCSCSSCEEEEEEEEEECSTTCEEEEEEEECCCSHHH
T ss_pred ccEEEEEEEeeeCCCCCCCCCCcCeEEEEEEC-C-EEE-ECCccCCCCCCCcccEEEEEecCCCCEEEEEEEECCCCccc
Confidence 345777889999998642 2336789988731 1 111 1111222346778877777775 467899998877642
Q ss_pred ----cccccCCccccceeeeecccccCCCCcceEeEEEeeccCCCCCCCCCeeEEEEEeec
Q 002906 407 ----KIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNVSSKPISLRIAVSFT 463 (867)
Q Consensus 407 ----~~~~~k~sk~~g~~s~~~~dll~~~~~Ls~e~w~~l~~~~~~~~~~p~~lrv~~S~T 463 (867)
.+ ...+...||.+.|+++++.. ..+.|++|.+.+... ...=+|+|.++++
T Consensus 93 ~~~~~~-~~~~~~~lG~~~i~l~~l~~-----~~~~w~~L~~~~~~~-~~~G~i~l~l~~e 146 (148)
T 3kwu_A 93 RVKQRF-KRESDDFLGQTIIEVRTLSG-----EMDVWYNLDKRTDKS-AVSGAIRLHISVE 146 (148)
T ss_dssp HHHTTT-SSCSSEEEEEEEEEGGGCCS-----EEEEEEECBCSSTTC-CCCCEEEEEEEEE
T ss_pred cccccc-cCCCCccEEEEEEEHHHCcC-----CCCEEEEcccCCCCC-CCceEEEEEEEEE
Confidence 00 01567899999999999932 468999998654321 1223566665554
No 14
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=95.93 E-value=0.055 Score=50.16 Aligned_cols=102 Identities=15% Similarity=0.271 Sum_probs=67.4
Q ss_pred EEEEeeeccCCCccccCCCceEEEEeccCCCc--ccc-cccceeeeecccceeeEEEE-ee----ecceEEEEEEeeCCC
Q 002906 335 VFVEIVAVKNLPEDHKDKGDLFVFFSKSQPDI--FFN-AKQKLTILSKSGMKQVASFQ-CE----ATGELLFELVSHSTS 406 (867)
Q Consensus 335 v~~~iv~~~n~p~~~k~~~~~fvr~~~~q~d~--~~~-~~~~~~~~s~~~~k~~~~~q-CE----~t~~l~lel~~~~~~ 406 (867)
+.|.|+.++|||.......+-||++.-+ +|. ... -++.+.=+.+|.|++...|. .. ....|.|+|..+..
T Consensus 22 L~V~V~~a~~L~~~~~g~~DPyv~v~l~-~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V~d~d~- 99 (134)
T 2b3r_A 22 LFIMVMHIKDLVTEDGADPNPYVKTYLL-PDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSVLSAES- 99 (134)
T ss_dssp EEEEEEEEECCCCTTSCCCCEEEEEEEE-SCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEEEECCS-
T ss_pred EEEEEEEeeCCCCCCCCCCCeEEEEEEE-cCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEEEECCC-
Confidence 5666789999996433346889998754 231 111 11112223467788766676 54 24688898887653
Q ss_pred cccccCCccccceeeeecccccCCCCcceEeEEEeeccC
Q 002906 407 KIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPR 445 (867)
Q Consensus 407 ~~~~~k~sk~~g~~s~~~~dll~~~~~Ls~e~w~~l~~~ 445 (867)
+.+...||.++|++++|.... ..+.|++|.+.
T Consensus 100 ----~~~~~~lG~~~i~l~~l~~~~---~~~~W~~L~~~ 131 (134)
T 2b3r_A 100 ----LRENFFLGGITLPLKDFNLSK---ETVKWYQLTAA 131 (134)
T ss_dssp ----SSCCEEEEEEEEEGGGSCTTS---CEEEEEECBC-
T ss_pred ----CCCCcEEEEEEEEhhhccCCC---CcceeEECCCc
Confidence 456789999999999997532 46899999765
No 15
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=95.78 E-value=0.073 Score=48.80 Aligned_cols=103 Identities=15% Similarity=0.193 Sum_probs=68.5
Q ss_pred EEEEeeeccCCCcccc-CCCceEEEEeccCCCc---ccccccceeeeecccceeeEEEEee-----ecceEEEEEEeeCC
Q 002906 335 VFVEIVAVKNLPEDHK-DKGDLFVFFSKSQPDI---FFNAKQKLTILSKSGMKQVASFQCE-----ATGELLFELVSHST 405 (867)
Q Consensus 335 v~~~iv~~~n~p~~~k-~~~~~fvr~~~~q~d~---~~~~~~~~~~~s~~~~k~~~~~qCE-----~t~~l~lel~~~~~ 405 (867)
+.|.|+.++||+.... ...+-||++.-.. |. ...-++.+.=+.+|.|.+...|..- ....|.|+|..+..
T Consensus 23 L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~-~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~ 101 (141)
T 1v27_A 23 LIVTILGAKDLPSREDGRPRNPYVKIYFLP-DRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQAR 101 (141)
T ss_dssp EEEEEEEEESCCCCSSSCCCCEEEECCCSS-CCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEEEEEBCS
T ss_pred EEEEEEEccCCCCcCCCCCCCCEEEEEEec-CCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEEEEECCC
Confidence 5666789999986532 2357899988432 21 1111111222456788877777631 24789999887764
Q ss_pred CcccccCC--ccccceeeeecccccCCCCcceEeEEEeeccCCC
Q 002906 406 SKIPMTGA--SKTMGTASLSLQNFISPISKLAVEQWFDLVPRSG 447 (867)
Q Consensus 406 ~~~~~~k~--sk~~g~~s~~~~dll~~~~~Ls~e~w~~l~~~~~ 447 (867)
+.+ ...||.+.|++.++... . .+.|++|.+.+.
T Consensus 102 -----~~~~~~~~lG~~~i~l~~l~~~--~--~~~W~~L~~~~~ 136 (141)
T 1v27_A 102 -----VREEESEFLGEILIELETALLD--D--EPHWYKLQTHDS 136 (141)
T ss_dssp -----SSSCCBCCCEEEEEEGGGCCCS--S--EEEEEECBCCSS
T ss_pred -----CcCCCCceEEEEEEEccccCCC--C--CCceEECccccc
Confidence 333 78999999999999864 2 789999987644
No 16
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=95.77 E-value=0.0028 Score=62.19 Aligned_cols=59 Identities=14% Similarity=0.225 Sum_probs=54.2
Q ss_pred CCCcceeecCCcceEEecCcccc---ccccccccccccCcceeeeeeCCCCcccce--eEEEeccCccEE
Q 002906 568 KEGHLFELLGNRMINLFPGRKLD---YEHKHCQKQRSEEDFVTAIEFSPADPYGKA--IALLDLKSGVIK 632 (867)
Q Consensus 568 ~dg~l~El~~~~Pl~fi~Gr~~~---fE~k~~~~~~~ge~FVT~V~~spe~pYGea--~aLldL~ke~Fe 632 (867)
.+|.+|+.+. +.|..|.++. ||+. +.+++.|+.+ .|.++|+++||++ .+++.++++.|.
T Consensus 17 ~dG~~fdss~---~~f~~G~g~vipG~e~a-L~Gm~~Ge~~--~v~ipp~~aYG~~~~~lv~~v~~~~f~ 80 (158)
T 3cgm_A 17 VEGEVLDQGE---LSYLHGHRNLIPGLEEA-LEGREEGEAF--QAHVPAEKAYGPHDPEGVQVVPLSAFP 80 (158)
T ss_dssp ETTEEEEEEE---EEEETTSSSSCHHHHHH-HTTCBTTCEE--EEEECGGGTTCCCCGGGEEEEEGGGSC
T ss_pred ECCEEEEeeE---EEEEECCCCcChHHHHH-HcCCCCCCEE--EEEECcHHHcCCCCcceEEEEEHHHCC
Confidence 6889999766 8999998877 9999 9999999999 9999999999999 899999999995
No 17
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.67 E-value=0.047 Score=50.53 Aligned_cols=108 Identities=17% Similarity=0.120 Sum_probs=68.6
Q ss_pred EEEEeeeccCCCccccCCCceEEEEeccCCCc--ccccccceeeeecccceeeEEEEeee----cceEEEEEEeeCCCcc
Q 002906 335 VFVEIVAVKNLPEDHKDKGDLFVFFSKSQPDI--FFNAKQKLTILSKSGMKQVASFQCEA----TGELLFELVSHSTSKI 408 (867)
Q Consensus 335 v~~~iv~~~n~p~~~k~~~~~fvr~~~~q~d~--~~~~~~~~~~~s~~~~k~~~~~qCE~----t~~l~lel~~~~~~~~ 408 (867)
+.|.|+.++||+.....+.+-||++.-...+. ...-++.+.=+.+|.|++...|.... ...|.|+|..+...-
T Consensus 26 L~v~v~~a~~L~~~d~~g~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~- 104 (142)
T 2dmg_A 26 LIVVVHACRNLIAFSEDGSDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVKNSGGFL- 104 (142)
T ss_dssp EEEEEEEEECCCCSSTTCCCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEEEECCCSS-
T ss_pred EEEEEEEeECCCCCCCCCCCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEEEECCCcc-
Confidence 55667899999865432278899988543221 11111112223467787666666542 358999988775311
Q ss_pred cccCCccccceeeeecccccCCCCcceEeEEEeeccCCCC
Q 002906 409 PMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGN 448 (867)
Q Consensus 409 ~~~k~sk~~g~~s~~~~dll~~~~~Ls~e~w~~l~~~~~~ 448 (867)
.+...+||.+.|+++++.... ..+.|++|.+.++.
T Consensus 105 --~~~~~~iG~~~i~l~~~~~~~---~~~~W~~L~~~~~~ 139 (142)
T 2dmg_A 105 --SKDKGLLGKVLVALASEELAK---GWTQWYDLTEDSGP 139 (142)
T ss_dssp --CCSCCCCEEEEEECCCSTTTT---CBCCBCCCBCSCSC
T ss_pred --ccCCcEEEEEEEecccccccc---cccceeeccCCCCC
Confidence 112359999999999987542 67899999887543
No 18
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=95.61 E-value=0.057 Score=49.49 Aligned_cols=117 Identities=15% Similarity=0.182 Sum_probs=77.6
Q ss_pred EEEEEeeeccCCCcccc-CCCceEEEEeccCCCccccccccee--eeecccceeeEEEEeee-cceEEEEEEeeCCCccc
Q 002906 334 EVFVEIVAVKNLPEDHK-DKGDLFVFFSKSQPDIFFNAKQKLT--ILSKSGMKQVASFQCEA-TGELLFELVSHSTSKIP 409 (867)
Q Consensus 334 ev~~~iv~~~n~p~~~k-~~~~~fvr~~~~q~d~~~~~~~~~~--~~s~~~~k~~~~~qCE~-t~~l~lel~~~~~~~~~ 409 (867)
.+.|.|+.++||+.... ...+-||.++-.. ++. +.++. =+.+|.|++...|.... ...|.|+|..+..
T Consensus 11 ~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~-~~~---kT~~~~~~~~nP~Wne~f~f~v~~~~~~l~~~V~d~~~---- 82 (136)
T 1wfj_A 11 TLEVVLVSAKGLEDADFLNNMDPYVQLTCRT-QDQ---KSNVAEGMGTTPEWNETFIFTVSEGTTELKAKIFDKDV---- 82 (136)
T ss_dssp EEEEEEEEEEECSSCCSSCSSCCCEEEESSS-CEE---ECCCCTTCCSSCEEEEEEEEEEESSCCEEEEEECCSSS----
T ss_pred EEEEEEEeccCCCCcccCCCcCceEEEEECC-ccc---eeEeccCCCCCCccCcEEEEEECCCCCEEEEEEEECCC----
Confidence 35566789999986532 2367899887432 221 11221 23467788777777664 6788888876653
Q ss_pred ccCCccccceeeeecccccCCCCcceEeEEEeeccCCCCCCCCCeeEEEEEeecCC
Q 002906 410 MTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNVSSKPISLRIAVSFTIP 465 (867)
Q Consensus 410 ~~k~sk~~g~~s~~~~dll~~~~~Ls~e~w~~l~~~~~~~~~~p~~lrv~~S~TpP 465 (867)
+.+..+||.+.|++++|+... -..+.|++|.+. +...=+|++.+++.|-
T Consensus 83 -~~~d~~lG~~~i~l~~l~~~~--~~~~~w~~L~~~----~~~~G~i~l~l~~~p~ 131 (136)
T 1wfj_A 83 -GTEDDAVGEATIPLEPVFVEG--SIPPTAYNVVKD----EEYKGEIWVALSFKPS 131 (136)
T ss_dssp -CTTTCCSEEEEEESHHHHHHS--EEEEEEEEEEET----TEEEEEEEEEEEEEEC
T ss_pred -CCCCceEEEEEEEHHHhccCC--CCCcEEEEeecC----CccCEEEEEEEEEEeC
Confidence 567889999999999996542 356899999832 1233477777777764
No 19
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=95.60 E-value=0.0026 Score=66.20 Aligned_cols=61 Identities=15% Similarity=0.282 Sum_probs=54.9
Q ss_pred CCcceeec-C--------------CcceEEecCcccc---ccccccccccccCcceeeeeeCCCCcccce--eEEEeccC
Q 002906 569 EGHLFELL-G--------------NRMINLFPGRKLD---YEHKHCQKQRSEEDFVTAIEFSPADPYGKA--IALLDLKS 628 (867)
Q Consensus 569 dg~l~El~-~--------------~~Pl~fi~Gr~~~---fE~k~~~~~~~ge~FVT~V~~spe~pYGea--~aLldL~k 628 (867)
+|.+|+.+ . ..|+.|..|.++. ||.. +.++..|+.+ .|.++|+++||++ ..++.+++
T Consensus 17 dG~vfDss~~~~A~e~gi~~~~~~~~P~~f~lG~g~vIpG~eea-L~Gm~vGek~--~v~Ippe~AYGe~~~~lv~~vp~ 93 (231)
T 3prb_A 17 DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEA-ILEMDVGEER--EVVLPPEKAFGKRDPSKIKLIPL 93 (231)
T ss_dssp TTEEEEESCHHHHHHTTCCCTTSCCSCEEEETTSSSSCHHHHHH-HHTCCTTCEE--EEEECGGGTTCCCCGGGEEEEET
T ss_pred CCEEEEeccchhcccccccccccCCCCEEEEeCCCcHHHHHHHH-HcCCCCCCEE--EEEeCcHHhcCCCChHHEEecCH
Confidence 78899887 3 2799999998777 9999 9999999999 9999999999999 88999999
Q ss_pred ccEE
Q 002906 629 GVIK 632 (867)
Q Consensus 629 e~Fe 632 (867)
+.|.
T Consensus 94 ~~f~ 97 (231)
T 3prb_A 94 SEFT 97 (231)
T ss_dssp HHHH
T ss_pred HHCC
Confidence 8874
No 20
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=95.48 E-value=0.065 Score=50.41 Aligned_cols=103 Identities=13% Similarity=0.124 Sum_probs=67.2
Q ss_pred EEEEeeeccCCCcccc-CCCceEEEEeccCCCcccccccceeeeecccceeeEEEEeee----cceEEEEEEeeCCCccc
Q 002906 335 VFVEIVAVKNLPEDHK-DKGDLFVFFSKSQPDIFFNAKQKLTILSKSGMKQVASFQCEA----TGELLFELVSHSTSKIP 409 (867)
Q Consensus 335 v~~~iv~~~n~p~~~k-~~~~~fvr~~~~q~d~~~~~~~~~~~~s~~~~k~~~~~qCE~----t~~l~lel~~~~~~~~~ 409 (867)
+.|.|+.++|||.... ...+-||++.-...+.-..-+..+.=+.++.|++...|.... ...|.|+|..+..
T Consensus 44 L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~---- 119 (152)
T 1rsy_A 44 LLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDR---- 119 (152)
T ss_dssp EEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCS----
T ss_pred EEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEECCC----
Confidence 5666789999986532 235789998744211111111111123467788666665542 4689999887653
Q ss_pred ccCCccccceeeeecccccCCCCcceEeEEEeeccC
Q 002906 410 MTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPR 445 (867)
Q Consensus 410 ~~k~sk~~g~~s~~~~dll~~~~~Ls~e~w~~l~~~ 445 (867)
+.+...||.+.|++.+|... -..+.|++|.+.
T Consensus 120 -~~~~~~iG~~~i~l~~l~~~---~~~~~W~~L~~~ 151 (152)
T 1rsy_A 120 -FSKHDIIGEFKVPMNTVDFG---HVTEEWRDLQSA 151 (152)
T ss_dssp -SSCCEEEEEEEEEGGGCCCS---SCEEEEEECBCC
T ss_pred -CCCCcEEEEEEEEchhccCC---CCcceEEECCCC
Confidence 55778999999999999643 257999998753
No 21
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.46 E-value=0.06 Score=50.20 Aligned_cols=105 Identities=14% Similarity=0.174 Sum_probs=67.8
Q ss_pred EEEEeeeccCCCcc-cc-------CCCceEEEEeccCCCcccccccceeeeecccceeeEEEEeee----cceEEEEEEe
Q 002906 335 VFVEIVAVKNLPED-HK-------DKGDLFVFFSKSQPDIFFNAKQKLTILSKSGMKQVASFQCEA----TGELLFELVS 402 (867)
Q Consensus 335 v~~~iv~~~n~p~~-~k-------~~~~~fvr~~~~q~d~~~~~~~~~~~~s~~~~k~~~~~qCE~----t~~l~lel~~ 402 (867)
+.|.|+.++|||.. .. ...+-||++.-...+.-..-++.+.=+.+|.|++...|.... ...|.|+|..
T Consensus 28 L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d 107 (147)
T 2enp_A 28 LTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLLLTVVD 107 (147)
T ss_dssp EEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSEEEEEEEC
T ss_pred EEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEEEeChHHhccCEEEEEEEE
Confidence 56667899999873 11 136789998744211111111112223467788777776652 3588888887
Q ss_pred eCCCcccccCCccccceeeeecccccCCCCcceEeEEEeeccCCC
Q 002906 403 HSTSKIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSG 447 (867)
Q Consensus 403 ~~~~~~~~~k~sk~~g~~s~~~~dll~~~~~Ls~e~w~~l~~~~~ 447 (867)
+.. +.+..+||.+.|++++|.... ..+.|+.|.|.+.
T Consensus 108 ~d~-----~~~~~~iG~~~i~l~~l~~~~---~~~~w~~L~~~~~ 144 (147)
T 2enp_A 108 FDK-----FSRHCVIGKVSVPLCEVDLVK---GGHWWKALIPSGP 144 (147)
T ss_dssp CST-----TCCSCCCEEEEEETTTSCTTT---CCCEEECCBCCCC
T ss_pred CCC-----CcCCcEEEEEEEechhcCCCC---CccEEEEeecCCC
Confidence 653 456779999999999997543 2478999988754
No 22
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=95.40 E-value=0.1 Score=48.14 Aligned_cols=114 Identities=8% Similarity=0.107 Sum_probs=71.5
Q ss_pred EEEEeeeccCCCcccc------------CCCceEEEEeccCCCcccccccceeeeecccceeeEEEEeeecceEEEEEEe
Q 002906 335 VFVEIVAVKNLPEDHK------------DKGDLFVFFSKSQPDIFFNAKQKLTILSKSGMKQVASFQCEATGELLFELVS 402 (867)
Q Consensus 335 v~~~iv~~~n~p~~~k------------~~~~~fvr~~~~q~d~~~~~~~~~~~~s~~~~k~~~~~qCE~t~~l~lel~~ 402 (867)
+.|.|++++||+.... ...+-||.++-. .....+ +....=+.+|-|.....|.-.....|.|+|.-
T Consensus 8 L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~-~~~~~~-T~~~~~t~nP~WnE~f~f~v~~~~~L~~~V~d 85 (136)
T 1gmi_A 8 LKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVD-DSRIGQ-TATKQKTNSPAWHDEFVTDVCNGRKIELAVFH 85 (136)
T ss_dssp EEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEET-TEEEEE-CCCCSSCSSCEEEEEEEEEEEEECEEEEEEEE
T ss_pred EEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEEC-CeEeee-eeEECCCcCCccCCEEEEEecCCCEEEEEEEe
Confidence 4566789999985421 125789888731 111111 11111134677776555554444788888876
Q ss_pred eCCCcccccCCccccceeeeecccccCCCCcceEeEEEeeccCCCCCCCCCeeEEEEEeecC
Q 002906 403 HSTSKIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNVSSKPISLRIAVSFTI 464 (867)
Q Consensus 403 ~~~~~~~~~k~sk~~g~~s~~~~dll~~~~~Ls~e~w~~l~~~~~~~~~~p~~lrv~~S~Tp 464 (867)
+.. +.+...||.++|+++++.... .-..+.|++|.|. =+|+|.+++++
T Consensus 86 ~d~-----~~~dd~iG~~~i~l~~l~~~~-~~~~~~w~~L~~~--------G~i~l~l~~~~ 133 (136)
T 1gmi_A 86 DAP-----IGYDDFVANCTIQFEELLQNG-SRHFEDWIDLEPE--------GKVYVIIDLSG 133 (136)
T ss_dssp CCS-----SSSCEEEEEEEEEHHHHTSTT-CSEEEEEEECBSS--------CEEEEEEEEEE
T ss_pred CCC-----CCCCCEEEEEEEEHHHhcccC-CCCccEEEEcCCC--------eEEEEEEEEEe
Confidence 543 456789999999999999753 3456999999874 24666666654
No 23
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=95.34 E-value=0.042 Score=51.44 Aligned_cols=108 Identities=15% Similarity=0.193 Sum_probs=67.5
Q ss_pred EEEEeeeccCCCccc--cCCCceEEEEeccCCCcccccccce---eeeecccceeeEEEEeee----cceEEEEEEeeCC
Q 002906 335 VFVEIVAVKNLPEDH--KDKGDLFVFFSKSQPDIFFNAKQKL---TILSKSGMKQVASFQCEA----TGELLFELVSHST 405 (867)
Q Consensus 335 v~~~iv~~~n~p~~~--k~~~~~fvr~~~~q~d~~~~~~~~~---~~~s~~~~k~~~~~qCE~----t~~l~lel~~~~~ 405 (867)
+.|.|+.++||+... ....+-||++.-. ++.-...+.+. .=+.+|.|++...|.-.. ...|.|+|.-+..
T Consensus 25 L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~-~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~V~d~d~ 103 (148)
T 3fdw_A 25 LVVHVKECHQLAYADEAKKRSNPYVKTYLL-PDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSVWHHGR 103 (148)
T ss_dssp EEEEEEEEESCCCSBTTTTBCCEEEEEEEE-TCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEEEEEECG
T ss_pred EEEEEEEecCCCCcccCCCCCCeEEEEEEE-cCCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEEEEECCC
Confidence 456678999998542 2336889998843 33211111111 113467788776776543 3468888886543
Q ss_pred CcccccCCccccceeeeecccccCCCCcceEeEEEeeccCCCCCCC
Q 002906 406 SKIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNVSS 451 (867)
Q Consensus 406 ~~~~~~k~sk~~g~~s~~~~dll~~~~~Ls~e~w~~l~~~~~~~~~ 451 (867)
+.+...||.+.|+++++.... ..+.|++|.++...+++
T Consensus 104 -----~~~~~~iG~~~i~l~~l~~~~---~~~~W~~L~~~~~~~~~ 141 (148)
T 3fdw_A 104 -----FGRNTFLGEAEIQMDSWKLDK---KLDHCLPLHGKISAESE 141 (148)
T ss_dssp -----GGCEEEEEEEEEEHHHHHHHC---CSEEEEECBCC------
T ss_pred -----CcCCcEEEEEEEEcccccccC---CccceEECcCccccccc
Confidence 567889999999999997542 46799999988665553
No 24
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=95.32 E-value=0.093 Score=49.09 Aligned_cols=102 Identities=18% Similarity=0.243 Sum_probs=68.8
Q ss_pred EEEEeeeccCCCcccc-CCCceEEEEeccCCC--cccccccceeeeecccceeeEEEEeee---cceEEEEEEeeCCCcc
Q 002906 335 VFVEIVAVKNLPEDHK-DKGDLFVFFSKSQPD--IFFNAKQKLTILSKSGMKQVASFQCEA---TGELLFELVSHSTSKI 408 (867)
Q Consensus 335 v~~~iv~~~n~p~~~k-~~~~~fvr~~~~q~d--~~~~~~~~~~~~s~~~~k~~~~~qCE~---t~~l~lel~~~~~~~~ 408 (867)
+.|.|+.++||+.... ...+-||+++-.... ....-++.+.=+.++.|++...|.... ...|.|+|..+..
T Consensus 33 L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~--- 109 (149)
T 1a25_A 33 LIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL--- 109 (149)
T ss_dssp EEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECCS---
T ss_pred EEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEECCC---
Confidence 6777889999986532 336889998844211 111111111113567888777777653 3578899887753
Q ss_pred cccCCccccceeeeecccccCCCCcceEeEEEeeccC
Q 002906 409 PMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPR 445 (867)
Q Consensus 409 ~~~k~sk~~g~~s~~~~dll~~~~~Ls~e~w~~l~~~ 445 (867)
+.+..+||.+.|++++|... ..+.|++|.+.
T Consensus 110 --~~~~~~iG~~~i~l~~l~~~----~~~~W~~L~~~ 140 (149)
T 1a25_A 110 --TSRNDFMGSLSFGISELQKA----GVDGWFKLLSQ 140 (149)
T ss_dssp --SSCCEEEEEEEEEHHHHTTC----CEEEEEECBCH
T ss_pred --CCCCCEEEEEEEEHHHhCcC----ccCCeEEccCC
Confidence 45678999999999999864 38899999764
No 25
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=95.31 E-value=0.16 Score=46.56 Aligned_cols=120 Identities=12% Similarity=0.172 Sum_probs=75.9
Q ss_pred cCCceEEEEEEEeeeccCCCcccc-CCCceEEEEeccCCCcccccccceeeeecccceeeEEEEee-ecceEEEEEEeeC
Q 002906 327 IPDLKIVEVFVEIVAVKNLPEDHK-DKGDLFVFFSKSQPDIFFNAKQKLTILSKSGMKQVASFQCE-ATGELLFELVSHS 404 (867)
Q Consensus 327 l~~r~vvev~~~iv~~~n~p~~~k-~~~~~fvr~~~~q~d~~~~~~~~~~~~s~~~~k~~~~~qCE-~t~~l~lel~~~~ 404 (867)
+.+.-. +.|.|+.++|||.... ...+-||.++-.. ++. + ++.+.=+.+|.|.+...|... +...|.|+|..+.
T Consensus 9 ~~~~~~--L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~-~~~-k-T~~~~~t~nP~wne~f~f~~~~~~~~l~i~V~d~d 83 (133)
T 2ep6_A 9 VKDVGI--LQVKVLKAADLLAADFSGKSDPFCLLELGN-DRL-Q-THTVYKNLNPEWNKVFTFPIKDIHDVLEVTVFDED 83 (133)
T ss_dssp CCCSEE--EEEEEEEEESCCCSSSSSCCCEEEEEEETT-EEE-E-CCCCSSCSSCCCCEEEEEEESCTTCEEEEEEEEEE
T ss_pred cCCceE--EEEEEEeeECCCCCCCCCCcCeEEEEEECC-EEE-E-eeeecCCCCCccccEEEEEecCCCCEEEEEEEECC
Confidence 344444 4455689999986532 2367899987322 221 1 111111346788877777765 3678999998876
Q ss_pred CCcccccCCccccceeeeecccccCCCCcceEeEEEeeccCCCCCCCCCeeEEEEEee
Q 002906 405 TSKIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNVSSKPISLRIAVSF 462 (867)
Q Consensus 405 ~~~~~~~k~sk~~g~~s~~~~dll~~~~~Ls~e~w~~l~~~~~~~~~~p~~lrv~~S~ 462 (867)
. +.+...||.+.|++++|... .++|++|.+.... +...=+|+|.+++
T Consensus 84 ~-----~~~~~~lG~~~i~l~~l~~~-----~~~w~~L~~~~~~-~~~~G~i~l~i~~ 130 (133)
T 2ep6_A 84 G-----DKPPDFLGKVAIPLLSIRDG-----QPNCYVLKNKDLE-QAFKGVIYLEMDL 130 (133)
T ss_dssp T-----TEEEEECCBCEEEGGGCCSS-----CCEECCCBCSCTT-SCCSSEEEEEEEE
T ss_pred C-----CCCCCeeEEEEEEHHHccCC-----CceEEEeecCCCC-CccceEEEEEEEE
Confidence 4 45678999999999999753 2589999866432 1222356666554
No 26
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=95.29 E-value=0.096 Score=51.26 Aligned_cols=103 Identities=17% Similarity=0.111 Sum_probs=69.3
Q ss_pred EEEEeeeccCCC-ccccCCCceEEEEeccCCCcccccccceeeeecccceeeEEEEeeecceEEEEEEeeCCCcccccCC
Q 002906 335 VFVEIVAVKNLP-EDHKDKGDLFVFFSKSQPDIFFNAKQKLTILSKSGMKQVASFQCEATGELLFELVSHSTSKIPMTGA 413 (867)
Q Consensus 335 v~~~iv~~~n~p-~~~k~~~~~fvr~~~~q~d~~~~~~~~~~~~s~~~~k~~~~~qCE~t~~l~lel~~~~~~~~~~~k~ 413 (867)
+.|.|++++||+ .......+-||.++-.. ...+ ++.+.=+.++.|++...|...+...|.|||.-+.. +++
T Consensus 38 L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~--~~~k-T~v~~~tlnP~Wne~f~f~v~~~~~L~~~V~D~d~-----~~~ 109 (173)
T 2nq3_A 38 LQITVISAKLKENKKNWFGPSPYVEVTVDG--QSKK-TEKCNNTNSPKWKQPLTVIVTPVSKLHFRVWSHQT-----LKS 109 (173)
T ss_dssp EEEEEEEEEECCCC--CCCCCEEEEEEETT--EEEE-CCCCSSCSSCEEEEEEEEEECTTCEEEEEEEECCS-----SSC
T ss_pred EEEEEEEeECCCCcccCCCCCeEEEEEECC--EEeE-ccccCCCCCCeECCEEEEEeCCCCEEEEEEEECCC-----CCC
Confidence 566678999998 33222367899987432 1111 11111234678888888887788899999987753 567
Q ss_pred ccccceeeeecccccCCCC-c-ceEeEEEeeccC
Q 002906 414 SKTMGTASLSLQNFISPIS-K-LAVEQWFDLVPR 445 (867)
Q Consensus 414 sk~~g~~s~~~~dll~~~~-~-Ls~e~w~~l~~~ 445 (867)
...||.+.|++++|+.... . -.++.|++|...
T Consensus 110 dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~ 143 (173)
T 2nq3_A 110 DVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGD 143 (173)
T ss_dssp CEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEES
T ss_pred CceEEEEEEEHHHhcccCCCCcceeEEEEECccC
Confidence 7899999999999986422 1 224789999876
No 27
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=95.15 E-value=0.074 Score=50.19 Aligned_cols=105 Identities=17% Similarity=0.279 Sum_probs=66.9
Q ss_pred EEEEeeeccCCCccccCCCceEEEEeccCCCcccccccce---eeeecccceeeEEEEee---ecceEEEEEEeeCCCcc
Q 002906 335 VFVEIVAVKNLPEDHKDKGDLFVFFSKSQPDIFFNAKQKL---TILSKSGMKQVASFQCE---ATGELLFELVSHSTSKI 408 (867)
Q Consensus 335 v~~~iv~~~n~p~~~k~~~~~fvr~~~~q~d~~~~~~~~~---~~~s~~~~k~~~~~qCE---~t~~l~lel~~~~~~~~ 408 (867)
+.|.|+.++||+.......+-||++.-. ++.--..+.+. .=+.+|.|++...|.-. ....|.|+|......
T Consensus 29 L~V~v~~a~~L~~~d~g~~Dpyv~v~l~-~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~~-- 105 (153)
T 3fbk_A 29 LLLHIIEGKGLISKQPGTCDPYVKISLI-PEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTVWNRASQ-- 105 (153)
T ss_dssp EEEEEEEEESCCCCSSSCCCEEEEEEEE-SCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEEEECCSS--
T ss_pred EEEEEEEeeCCCCCCCCCCCEEEEEEEE-cCCCCccEEeccccCCCCCCccccEEEEecccHHhCCEEEEEEEeCCCC--
Confidence 4566789999986532346789998743 22100111112 22346778777777762 235688888765431
Q ss_pred cccCCccccceeeeecccccCCCCcceEeEEEeeccCC
Q 002906 409 PMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRS 446 (867)
Q Consensus 409 ~~~k~sk~~g~~s~~~~dll~~~~~Ls~e~w~~l~~~~ 446 (867)
.++...||.++|++.+|..+ .-..+.|+.|.+..
T Consensus 106 --~~~d~~lG~~~i~l~~l~~~--~~~~~~W~~L~~~~ 139 (153)
T 3fbk_A 106 --SRQSGLIGCMSFGVKSLLTP--DKEISGWYYLLGEH 139 (153)
T ss_dssp --GGGCEEEEEEEEEHHHHTC----CCEEEEEECBCTT
T ss_pred --CCCCcEEEEEEEEHHHhcCC--CCccccEEECCChh
Confidence 23478999999999999864 34678999998763
No 28
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=95.15 E-value=0.25 Score=50.62 Aligned_cols=122 Identities=12% Similarity=0.155 Sum_probs=74.7
Q ss_pred EEEEEeeeccCCCccc-cCCCceEEEEeccCCC-cccccccceeeeecccceeeEEEEeee----cceEEEEEEeeCCCc
Q 002906 334 EVFVEIVAVKNLPEDH-KDKGDLFVFFSKSQPD-IFFNAKQKLTILSKSGMKQVASFQCEA----TGELLFELVSHSTSK 407 (867)
Q Consensus 334 ev~~~iv~~~n~p~~~-k~~~~~fvr~~~~q~d-~~~~~~~~~~~~s~~~~k~~~~~qCE~----t~~l~lel~~~~~~~ 407 (867)
++.|.|++++|||... ....+-||.+.-...+ ..++ ++...=+.+|.|.+...|.... ...|.|+|..+..
T Consensus 20 ~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~-T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~~V~d~d~-- 96 (284)
T 2r83_A 20 QLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFE-TKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYDFDR-- 96 (284)
T ss_dssp EEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEE-CCCCCSCSSCEEEEEEEECCCGGGCTTCEEEEEEEECCS--
T ss_pred EEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEe-CCcccCCCCCeeCceEEEEechHHhCcCEEEEEEEECCC--
Confidence 3567778999998642 2336789988743211 1111 1111113467787666666542 3578888876653
Q ss_pred ccccCCccccceeeeecccccCCCCcceEeEEEeeccCCCCCCCCCeeEEEEEeecC
Q 002906 408 IPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNVSSKPISLRIAVSFTI 464 (867)
Q Consensus 408 ~~~~k~sk~~g~~s~~~~dll~~~~~Ls~e~w~~l~~~~~~~~~~p~~lrv~~S~Tp 464 (867)
+.+...||.+.|++.++.... ..+.|++|.+..+......=.|.+.+...|
T Consensus 97 ---~~~~~~lG~~~i~l~~l~~~~---~~~~w~~L~~~~~~~~~~~G~i~l~l~~~p 147 (284)
T 2r83_A 97 ---FSKHDIIGEFKVPMNTVDFGH---VTEEWRDLQSAEKEEQEKLGDICFSLRYVP 147 (284)
T ss_dssp ---SSCCCEEEEEEEEGGGCCCSS---CEEEEEECBCCSSCCCCCCCEEEEEEEEET
T ss_pred ---CCCCceeEEEEEcchhcccCC---cceeEEEeeccccccccccccEEEEEEecC
Confidence 557789999999999997542 678999998764432222224555544443
No 29
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=95.05 E-value=0.18 Score=46.12 Aligned_cols=124 Identities=10% Similarity=0.066 Sum_probs=74.2
Q ss_pred EEEEEEeeeccCCCcccc-CCCceEEEEeccCCCcccccccceeeeecccceeeEEEEeeecceEEEEEEeeCCCccccc
Q 002906 333 VEVFVEIVAVKNLPEDHK-DKGDLFVFFSKSQPDIFFNAKQKLTILSKSGMKQVASFQCEATGELLFELVSHSTSKIPMT 411 (867)
Q Consensus 333 vev~~~iv~~~n~p~~~k-~~~~~fvr~~~~q~d~~~~~~~~~~~~s~~~~k~~~~~qCE~t~~l~lel~~~~~~~~~~~ 411 (867)
..+.|.|+.++||+.... ...+-||.+.-.......+ +..+.=+.+|.|.+...|+......|.|+|.-+.... ..
T Consensus 5 ~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~k-T~v~~~t~nP~wne~f~f~v~~~~~l~~~v~d~d~~~--~~ 81 (132)
T 3pyc_A 5 IKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHS-TDTVKNTLDPKWNQHYDLYVGKTDSITISVWNHKKIH--KK 81 (132)
T ss_dssp EEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEE-CCCCSSCSSCEEEEEEEEEEETTCCEEEEEEEGGGTT--SS
T ss_pred EEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEE-CCccCCCCCCCccCEEEEEeCCCCEEEEEEEECCCCC--CC
Confidence 345667789999975422 2367899987432212211 1222223467788888888876667999988775311 00
Q ss_pred CCccccceeeeecccccCCCCcceEeEEEeeccCCCCCCC-CCeeEEEEEe
Q 002906 412 GASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNVSS-KPISLRIAVS 461 (867)
Q Consensus 412 k~sk~~g~~s~~~~dll~~~~~Ls~e~w~~l~~~~~~~~~-~p~~lrv~~S 461 (867)
.....||.+.|++++|.+.. -....|++|....+.... ..=+|+|.+|
T Consensus 82 ~~d~~lG~~~i~l~~l~~~~--~~~~~~~~L~~~~~~~~~~~~G~i~v~l~ 130 (132)
T 3pyc_A 82 QGAGFLGCVRLLSNAISRLK--DTGYQRLDLCKLNPSDTDAVRGQIVVSLQ 130 (132)
T ss_dssp TTTTEEEEEEECHHHHHHHT--TSCCEEEECBCSSTTCCCCCCSEEEEEEE
T ss_pred CCCCceEEEEEeHHHhhccc--ccCcEEEeeeecCCCCCCceeEEEEEEEE
Confidence 12679999999999985432 233488999775433222 2225555544
No 30
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=94.82 E-value=0.14 Score=49.87 Aligned_cols=104 Identities=16% Similarity=0.167 Sum_probs=65.8
Q ss_pred EEEEeeeccCCCcccc-----------CCCceEEEEeccCCCcccccccceeeeecccceeeEEEEeeecceEEEEEEee
Q 002906 335 VFVEIVAVKNLPEDHK-----------DKGDLFVFFSKSQPDIFFNAKQKLTILSKSGMKQVASFQCEATGELLFELVSH 403 (867)
Q Consensus 335 v~~~iv~~~n~p~~~k-----------~~~~~fvr~~~~q~d~~~~~~~~~~~~s~~~~k~~~~~qCE~t~~l~lel~~~ 403 (867)
+.|.|++++||+.... ...+-||.++-.+ ....+ ++...=+.+|.|+....|.=.....|.|+|.-.
T Consensus 31 L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~-~~~~k-T~v~~ktlnP~WNE~F~f~v~~~~~L~~~V~D~ 108 (157)
T 2fk9_A 31 LRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQ-VRVGQ-TSTKQKTNKPTYNEEFCANVTDGGHLELAVFHE 108 (157)
T ss_dssp EEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETT-EEEEE-CCCCSSCSSCEEEEEEEEEEEEECEEEEEEEEC
T ss_pred EEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECC-EeeEE-eeecCCCCCCccCcEEEEEcCCCCEEEEEEEEC
Confidence 5666789999985421 1257899886211 11111 111111356788876666554556777777654
Q ss_pred CCCcccccCCccccceeeeecccccCC-CCcceEeEEEeeccC
Q 002906 404 STSKIPMTGASKTMGTASLSLQNFISP-ISKLAVEQWFDLVPR 445 (867)
Q Consensus 404 ~~~~~~~~k~sk~~g~~s~~~~dll~~-~~~Ls~e~w~~l~~~ 445 (867)
.. +.+...||.++|++++|... +..-..+.||+|.+.
T Consensus 109 d~-----~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~~ 146 (157)
T 2fk9_A 109 TP-----LGYDHFVANCTLQFQELLRTTGASDTFEGWVDLEPE 146 (157)
T ss_dssp CS-----SSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBSS
T ss_pred CC-----CCCCCEEEEEEEEHHHhhcccCCCCcccEEEECCCC
Confidence 32 45677999999999999854 013468999999773
No 31
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=94.78 E-value=0.14 Score=46.71 Aligned_cols=103 Identities=15% Similarity=0.213 Sum_probs=67.0
Q ss_pred EEEEEeeeccCCCcccc-CCCceEEEEeccCC--CcccccccceeeeecccceeeEEEEeee---cceEEEEEEeeCCCc
Q 002906 334 EVFVEIVAVKNLPEDHK-DKGDLFVFFSKSQP--DIFFNAKQKLTILSKSGMKQVASFQCEA---TGELLFELVSHSTSK 407 (867)
Q Consensus 334 ev~~~iv~~~n~p~~~k-~~~~~fvr~~~~q~--d~~~~~~~~~~~~s~~~~k~~~~~qCE~---t~~l~lel~~~~~~~ 407 (867)
.+.|.|+.++|||.... ...+-||.++-... .....-+..+.=+.++.|++...|.-.. ...|.|+|..+..
T Consensus 17 ~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~d~-- 94 (137)
T 3rdl_A 17 KLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWDR-- 94 (137)
T ss_dssp EEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEECCS--
T ss_pred EEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEECCC--
Confidence 35667889999986422 34678999874211 1111111111223567788766776543 2468888877643
Q ss_pred ccccCCccccceeeeecccccCCCCcceEeEEEeeccC
Q 002906 408 IPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPR 445 (867)
Q Consensus 408 ~~~~k~sk~~g~~s~~~~dll~~~~~Ls~e~w~~l~~~ 445 (867)
+.+...||.++|++++|.... .+.|++|.+.
T Consensus 95 ---~~~~~~iG~~~i~l~~l~~~~----~~~W~~L~~~ 125 (137)
T 3rdl_A 95 ---TTRNDFMGSLSFGVSELMKMP----ASGWYKLLNQ 125 (137)
T ss_dssp ---SSCCEEEEEEEEEHHHHHHSC----EEEEEECBCH
T ss_pred ---CCCCceEEEEEEeHHHhccCc----cCceEECcCc
Confidence 457789999999999998652 7999999765
No 32
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=94.77 E-value=0.082 Score=51.08 Aligned_cols=106 Identities=16% Similarity=0.154 Sum_probs=67.8
Q ss_pred EEEEEeeeccCCCccc--cCCCceEEEEeccCCCc-c-cccccceeeeecccceeeEEEEeee-cceEEEEEE-eeCCCc
Q 002906 334 EVFVEIVAVKNLPEDH--KDKGDLFVFFSKSQPDI-F-FNAKQKLTILSKSGMKQVASFQCEA-TGELLFELV-SHSTSK 407 (867)
Q Consensus 334 ev~~~iv~~~n~p~~~--k~~~~~fvr~~~~q~d~-~-~~~~~~~~~~s~~~~k~~~~~qCE~-t~~l~lel~-~~~~~~ 407 (867)
.+.|.|+.++||+... ....+-||++.-..... . ..-+..+.=+.++.|++...|...+ ...|.|+|. -+..
T Consensus 31 ~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~L~~~V~~d~d~-- 108 (171)
T 2q3x_A 31 QLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDYGR-- 108 (171)
T ss_dssp EEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCCTTEEEEEEEEEECST--
T ss_pred EEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecCCCCEEEEEEEEcCCC--
Confidence 3566678999998642 23468899987432111 0 1011111112467777665665543 568888888 4432
Q ss_pred ccccCCccccceeeeecccccCCCCcceEeEEEeeccCCC
Q 002906 408 IPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSG 447 (867)
Q Consensus 408 ~~~~k~sk~~g~~s~~~~dll~~~~~Ls~e~w~~l~~~~~ 447 (867)
+++...||.+.|++++|.... ..+.|++|.+.+.
T Consensus 109 ---~~~d~~iG~~~i~l~~l~~~~---~~~~W~~L~~~~~ 142 (171)
T 2q3x_A 109 ---MDHKCFMGVAQILLEELDLSS---MVIGWYKLFPPSS 142 (171)
T ss_dssp ---TCSSEEEEEEEECGGGSCTTS---CEEEEEECBCGGG
T ss_pred ---CCCCCEEEEEEEEHHHcccCC---CcceeEECCCccc
Confidence 456789999999999997542 5789999987754
No 33
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=94.72 E-value=0.27 Score=45.18 Aligned_cols=105 Identities=11% Similarity=0.112 Sum_probs=67.5
Q ss_pred EEEEeeeccCCCcccc--CCCceEEEEeccCCCcccccccceeeeecccceeeEEEE-ee----ecceEEEEEEeeCCCc
Q 002906 335 VFVEIVAVKNLPEDHK--DKGDLFVFFSKSQPDIFFNAKQKLTILSKSGMKQVASFQ-CE----ATGELLFELVSHSTSK 407 (867)
Q Consensus 335 v~~~iv~~~n~p~~~k--~~~~~fvr~~~~q~d~~~~~~~~~~~~s~~~~k~~~~~q-CE----~t~~l~lel~~~~~~~ 407 (867)
+.|.|+.++|||.... ...+-||++.-...+.-..-++.+.=+.+|.|++...|+ .. ....|.|+|..+..
T Consensus 24 L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V~d~d~-- 101 (138)
T 1ugk_A 24 FVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILSFDR-- 101 (138)
T ss_dssp EEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEEEEECS--
T ss_pred EEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEEEECCC--
Confidence 5566789999986532 236789998844211111111112223467788766665 32 24688899887653
Q ss_pred ccccCCccccceeeeecccccCCCCcceEeEEEeeccCC
Q 002906 408 IPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRS 446 (867)
Q Consensus 408 ~~~~k~sk~~g~~s~~~~dll~~~~~Ls~e~w~~l~~~~ 446 (867)
+.+...||.+.|++++|.... =..+-|++|.+..
T Consensus 102 ---~~~~~~lG~~~i~l~~l~~~~--~~~~~~~~l~~~~ 135 (138)
T 1ugk_A 102 ---FSRDDIIGEVLIPLSGIELSE--GKMLMNREIISGP 135 (138)
T ss_dssp ---SCCCCCCEEEEEECTTCCCTT--CCEEEEEECBSSS
T ss_pred ---CCCCcEEEEEEEehhHccCCC--CcchhhhhhhcCC
Confidence 556789999999999997643 2346789997763
No 34
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=94.51 E-value=0.13 Score=48.17 Aligned_cols=105 Identities=10% Similarity=0.166 Sum_probs=63.8
Q ss_pred EEEEEeeeccCCCcccc-CCCceEEEEeccCCCcc-cc-cccceeeeecccceeeEEEEeeec----ceEEEEEEeeCCC
Q 002906 334 EVFVEIVAVKNLPEDHK-DKGDLFVFFSKSQPDIF-FN-AKQKLTILSKSGMKQVASFQCEAT----GELLFELVSHSTS 406 (867)
Q Consensus 334 ev~~~iv~~~n~p~~~k-~~~~~fvr~~~~q~d~~-~~-~~~~~~~~s~~~~k~~~~~qCE~t----~~l~lel~~~~~~ 406 (867)
++.|.|+.++|||.... ...+-||++.-..-... .+ -+..+.=+.++-|++...|..... ..|.|+|..+..
T Consensus 31 ~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V~d~d~- 109 (153)
T 1w15_A 31 TLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLVLDSER- 109 (153)
T ss_dssp EEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEEEECCT-
T ss_pred EEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEEEEEEEeCCC-
Confidence 35666789999986532 23678999884321111 01 111111234677877667766532 578888876653
Q ss_pred cccccCCccccceeeeeccc----------ccCCCCcceEeEEEeecc
Q 002906 407 KIPMTGASKTMGTASLSLQN----------FISPISKLAVEQWFDLVP 444 (867)
Q Consensus 407 ~~~~~k~sk~~g~~s~~~~d----------ll~~~~~Ls~e~w~~l~~ 444 (867)
+.+..+||.+.|++++ |++. +.-.+++|..|.+
T Consensus 110 ----~~~~~~lG~~~i~l~~~~~~~~~W~~l~~~-p~~~~~~Wh~L~~ 152 (153)
T 1w15_A 110 ----GSRNEVIGRLVLGATAEGSGGGHWKEICDF-PRRQIAKWHMLCD 152 (153)
T ss_dssp ----TSCCEEEEEEEESTTCCSHHHHHHHHHHHS-TTCCEEEEEECBC
T ss_pred ----CCCCcEEEEEEECCCCCchHHHHHHHHHhC-CCCeeeecccccc
Confidence 5567899999998776 5554 4566788887765
No 35
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=94.29 E-value=0.19 Score=45.70 Aligned_cols=104 Identities=15% Similarity=0.216 Sum_probs=65.1
Q ss_pred EEEEeeeccCCCcccc-CCCceEEEEeccCCCcc--cccccceeeeecccceeeEEEEeeec----ceEEEEEEeeCCCc
Q 002906 335 VFVEIVAVKNLPEDHK-DKGDLFVFFSKSQPDIF--FNAKQKLTILSKSGMKQVASFQCEAT----GELLFELVSHSTSK 407 (867)
Q Consensus 335 v~~~iv~~~n~p~~~k-~~~~~fvr~~~~q~d~~--~~~~~~~~~~s~~~~k~~~~~qCE~t----~~l~lel~~~~~~~ 407 (867)
+.|.|+.++||+.... ...+-||.+.-...+.. ..-+..+.-+.++-|++...|..... ..|.|+|..+..
T Consensus 18 L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V~d~~~-- 95 (138)
T 3n5a_A 18 IIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITVMDKDK-- 95 (138)
T ss_dssp EEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEEEECCS--
T ss_pred EEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEEEEECCC--
Confidence 5667889999986532 23678999874322211 11111122234677877777776532 578888877653
Q ss_pred ccccCCccccceeeeeccc----------ccCCCCcceEeEEEeecc
Q 002906 408 IPMTGASKTMGTASLSLQN----------FISPISKLAVEQWFDLVP 444 (867)
Q Consensus 408 ~~~~k~sk~~g~~s~~~~d----------ll~~~~~Ls~e~w~~l~~ 444 (867)
+.+...||.+.|++++ |+.. +.-.+++|..|.|
T Consensus 96 ---~~~~~~lG~~~i~l~~~~~~~~~W~~l~~~-~~~~~~~Wh~L~p 138 (138)
T 3n5a_A 96 ---LSRNDVIGKIYLSWKSGPGEVKHWKDMIAR-PRQPVAQWHQLKA 138 (138)
T ss_dssp ---SSCCEEEEEEEESSSSCHHHHHHHHHHHHS-TTCCEEEEEECBC
T ss_pred ---CCCCcEEEEEEEccccCChHHHHHHHHHhC-CCCeEEEEeecCC
Confidence 4577899999999884 4443 3556677777654
No 36
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=94.26 E-value=0.22 Score=45.04 Aligned_cols=99 Identities=15% Similarity=0.181 Sum_probs=62.6
Q ss_pred EEEEeeeccCCCcccc-CCCceEEEEeccCCCc---ccccccceeeeecccceeeEEEEee-----ecceEEEEEEeeCC
Q 002906 335 VFVEIVAVKNLPEDHK-DKGDLFVFFSKSQPDI---FFNAKQKLTILSKSGMKQVASFQCE-----ATGELLFELVSHST 405 (867)
Q Consensus 335 v~~~iv~~~n~p~~~k-~~~~~fvr~~~~q~d~---~~~~~~~~~~~s~~~~k~~~~~qCE-----~t~~l~lel~~~~~ 405 (867)
+.|.|++++|||.... ...+-||+++-.. |. ...-++.+.=+.+|-|++...|..- ....|.|+|..+..
T Consensus 20 L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~V~d~d~ 98 (129)
T 2bwq_A 20 LIVTILGAKDLPSREDGRPRNPYVKIYFLP-DRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQAR 98 (129)
T ss_dssp EEEEEEEEESCCCCTTSCCBCEEEEEEEES-SCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEEEEEC--
T ss_pred EEEEEEEeeCCCCCCCCCCCCCEEEEEEec-CCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEEEEEECCc
Confidence 5666789999986532 2357899987432 21 1111111222346778776666642 24688888887654
Q ss_pred CcccccCC--ccccceeeeecccccCCCCcceEeEEEeec
Q 002906 406 SKIPMTGA--SKTMGTASLSLQNFISPISKLAVEQWFDLV 443 (867)
Q Consensus 406 ~~~~~~k~--sk~~g~~s~~~~dll~~~~~Ls~e~w~~l~ 443 (867)
+.+ ...||.+.|++.++.... .+.|++|.
T Consensus 99 -----~~~~~~~~lG~~~i~l~~l~~~~----~~~W~~Lq 129 (129)
T 2bwq_A 99 -----VREEESEFLGEILIELETALLDD----EPHWYKLQ 129 (129)
T ss_dssp ----------CEEEEEEEEEGGGCCCSS----CEEEEECC
T ss_pred -----CcCcCCceeEEEEEEccccCCCc----CCccEECc
Confidence 333 789999999999998642 78999973
No 37
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=94.12 E-value=0.22 Score=47.51 Aligned_cols=106 Identities=12% Similarity=0.120 Sum_probs=66.4
Q ss_pred EEEEeeeccCCCcccc-CCCceEEEEeccCCCc--ccccccceeeeecccceeeEEEEeee----cceEEEEEEeeCCCc
Q 002906 335 VFVEIVAVKNLPEDHK-DKGDLFVFFSKSQPDI--FFNAKQKLTILSKSGMKQVASFQCEA----TGELLFELVSHSTSK 407 (867)
Q Consensus 335 v~~~iv~~~n~p~~~k-~~~~~fvr~~~~q~d~--~~~~~~~~~~~s~~~~k~~~~~qCE~----t~~l~lel~~~~~~~ 407 (867)
+.|.|+.++|||.... ...+-||+++-...+. ...-+..+.=+.++-|++...|.... ...|.|+|..+..
T Consensus 39 L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~-- 116 (166)
T 2cm5_A 39 LIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDI-- 116 (166)
T ss_dssp EEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCS--
T ss_pred EEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEEEECCC--
Confidence 5566789999986522 2367899988442111 11111112223467788777777753 4588899887653
Q ss_pred ccccCCccccceeeeeccc----------ccCCCCcceEeEEEeeccCC
Q 002906 408 IPMTGASKTMGTASLSLQN----------FISPISKLAVEQWFDLVPRS 446 (867)
Q Consensus 408 ~~~~k~sk~~g~~s~~~~d----------ll~~~~~Ls~e~w~~l~~~~ 446 (867)
+.+...||.++|++++ |++. +.-.++.|..|.+.+
T Consensus 117 ---~~~~~~iG~~~i~l~~~~~~~~~W~~l~~~-~~~~~~~Wh~L~~~~ 161 (166)
T 2cm5_A 117 ---GKSNDYIGGCQLGISAKGERLKHWYECLKN-KDKKIERWHQLQNEN 161 (166)
T ss_dssp ---SSCCEEEEEEEEETTCCHHHHHHHHHHHHC-TTCCEEEEEECBC--
T ss_pred ---CCCCcEEEeEEEecccCCchhHHHHHHHhC-CCCcceEeeECCCcc
Confidence 4567899999999766 4444 356678888886653
No 38
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=94.05 E-value=0.23 Score=46.86 Aligned_cols=105 Identities=14% Similarity=0.196 Sum_probs=67.9
Q ss_pred EEEEeeeccCCCcccc-CCCceEEEEeccCCCc-ccc-cccceeeeecccceeeEEEEeee----cceEEEEEEeeCCCc
Q 002906 335 VFVEIVAVKNLPEDHK-DKGDLFVFFSKSQPDI-FFN-AKQKLTILSKSGMKQVASFQCEA----TGELLFELVSHSTSK 407 (867)
Q Consensus 335 v~~~iv~~~n~p~~~k-~~~~~fvr~~~~q~d~-~~~-~~~~~~~~s~~~~k~~~~~qCE~----t~~l~lel~~~~~~~ 407 (867)
+.|.|+.++|||.... ...+-||.++-...+. ... -+..+.=+.++.|.+...|.... ...|.|+|..+..
T Consensus 27 L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~-- 104 (159)
T 1tjx_A 27 LTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDK-- 104 (159)
T ss_dssp EEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCS--
T ss_pred EEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEEEECCC--
Confidence 4566789999986532 2367899987432111 111 11111123467788777777653 3578888887653
Q ss_pred ccccCCccccceeeeecc----------cccCCCCcceEeEEEeeccC
Q 002906 408 IPMTGASKTMGTASLSLQ----------NFISPISKLAVEQWFDLVPR 445 (867)
Q Consensus 408 ~~~~k~sk~~g~~s~~~~----------dll~~~~~Ls~e~w~~l~~~ 445 (867)
+.+...||.+.|++. +|+.. +.-.+++|+.|.+.
T Consensus 105 ---~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~-~~~~~~~W~~L~~~ 148 (159)
T 1tjx_A 105 ---IGKNDAIGKVFVGYNSTGAELRHWSDMLAN-PRRPIAQWHTLQVE 148 (159)
T ss_dssp ---SSCCEEEEEEEEETTCCHHHHHHHHHHHHS-TTCCEEEEEECBCH
T ss_pred ---CCCCceEEEEEECCCCCCcHHHHHHHHHHC-CCCeeeeEEECcCc
Confidence 557789999999987 55644 45678899999764
No 39
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=93.64 E-value=0.37 Score=46.20 Aligned_cols=103 Identities=12% Similarity=0.153 Sum_probs=67.7
Q ss_pred EEEEeeeccCCCccc-cCCCceEEEEeccCC--Ccc-cccccceeeeecccceeeEEEEeee----cceEEEEEEeeCCC
Q 002906 335 VFVEIVAVKNLPEDH-KDKGDLFVFFSKSQP--DIF-FNAKQKLTILSKSGMKQVASFQCEA----TGELLFELVSHSTS 406 (867)
Q Consensus 335 v~~~iv~~~n~p~~~-k~~~~~fvr~~~~q~--d~~-~~~~~~~~~~s~~~~k~~~~~qCE~----t~~l~lel~~~~~~ 406 (867)
+.|.|+.++||+... ....+-||++.-... ++. ..-++.+.=+.+|-|+....|.-.. ...|.|+|.-+..
T Consensus 45 L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~V~d~d~- 123 (155)
T 2z0u_A 45 FAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVDVCTTDR- 123 (155)
T ss_dssp EEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEEEEEECT-
T ss_pred EEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEEEEECCC-
Confidence 556678999998642 234688999986543 221 1111222223467787666666542 4678899887754
Q ss_pred cccccCCccccceeeeecccccCCCCcceEeEEEeecc
Q 002906 407 KIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVP 444 (867)
Q Consensus 407 ~~~~~k~sk~~g~~s~~~~dll~~~~~Ls~e~w~~l~~ 444 (867)
+.+...||.+.|++++|... .-..+.|++|.|
T Consensus 124 ----~~~~d~iG~~~i~l~~l~~~--~~~~~~W~~L~~ 155 (155)
T 2z0u_A 124 ----SHLEECLGGAQISLAEVCRS--GERSTRWYNLLS 155 (155)
T ss_dssp ----TSCEEEEEEEEEECTTSCTT--CCCEEEEEEEBC
T ss_pred ----CCCCcEEEEEEEEHHHccCC--CCccccceEccC
Confidence 45678999999999999632 335689999864
No 40
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=93.59 E-value=0.21 Score=46.05 Aligned_cols=106 Identities=11% Similarity=0.120 Sum_probs=68.9
Q ss_pred EEEEEeeeccCCCcccc-CCCceEEEEeccCCCcc-----------cccccceeeeecccceeeEEEE-ee----ecceE
Q 002906 334 EVFVEIVAVKNLPEDHK-DKGDLFVFFSKSQPDIF-----------FNAKQKLTILSKSGMKQVASFQ-CE----ATGEL 396 (867)
Q Consensus 334 ev~~~iv~~~n~p~~~k-~~~~~fvr~~~~q~d~~-----------~~~~~~~~~~s~~~~k~~~~~q-CE----~t~~l 396 (867)
.+.|.|+.++|||.... ...+-||+++-...+.- ..-+..+.=+.+|.|.+.-.|. -. ....|
T Consensus 19 ~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~~l 98 (142)
T 1rh8_A 19 NLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKKTL 98 (142)
T ss_dssp EEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTCEE
T ss_pred EEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCCEE
Confidence 36677899999986532 23678999985432210 0111111113467787655553 22 35689
Q ss_pred EEEEEeeCCCcccccCCccccceeeeecccccCCCCcceEeEEEeeccCCC
Q 002906 397 LFELVSHSTSKIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSG 447 (867)
Q Consensus 397 ~lel~~~~~~~~~~~k~sk~~g~~s~~~~dll~~~~~Ls~e~w~~l~~~~~ 447 (867)
.|+|..+.. +.+...||.+.|+++++.... ..++|++|.+.++
T Consensus 99 ~i~V~d~d~-----~~~~~~lG~~~i~l~~l~~~~---~~~~W~~L~~~~~ 141 (142)
T 1rh8_A 99 EVTVWDYDR-----FSSNDFLGEVLIDLSSTSHLD---NTPRWYPLKEQTE 141 (142)
T ss_dssp EEEEEEECS-----SSCEEEEEEEEEETTSCGGGT---TCCEEEECBCCCC
T ss_pred EEEEEECCC-----CCCCceEEEEEEeccccccCC---CCCeEEECCccCC
Confidence 999988764 456789999999999987532 4679999987643
No 41
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=93.43 E-value=0.031 Score=52.15 Aligned_cols=49 Identities=18% Similarity=0.244 Sum_probs=44.8
Q ss_pred CCcceeec--CCcceEEecCcccc---ccccccccccccCcceeeeeeCCCCcccce
Q 002906 569 EGHLFELL--GNRMINLFPGRKLD---YEHKHCQKQRSEEDFVTAIEFSPADPYGKA 620 (867)
Q Consensus 569 dg~l~El~--~~~Pl~fi~Gr~~~---fE~k~~~~~~~ge~FVT~V~~spe~pYGea 620 (867)
+|.+|+.+ .++|+.|..|.+.. ||.. +.+++.|+.+ .|.++|+.+||+.
T Consensus 51 dG~~fdss~~~~~p~~f~lG~g~~i~G~e~~-l~gm~~Ge~~--~v~ip~~~aYG~~ 104 (128)
T 3o5q_A 51 NGKKFDSSHDRNEPFVFSLGKGQVIKAWDIG-VATMKKGEIC--HLLCKPEYAYGSA 104 (128)
T ss_dssp TSCEEEEHHHHTSCEEEETTSSSSCHHHHHH-HTTCCTTCEE--EEEECGGGTTTTT
T ss_pred CCCEEEecCCCCCCEEEEECCCCccHHHHHH-HhcCCCCCEE--EEEEChHHcCCCC
Confidence 78899988 47899999998776 9999 9999999999 9999999999997
No 42
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=92.96 E-value=0.054 Score=51.15 Aligned_cols=49 Identities=14% Similarity=0.181 Sum_probs=44.1
Q ss_pred CCCcceeec-C-CcceEEecCcccc---ccccccccccccCcceeeeeeCCCCcccc
Q 002906 568 KEGHLFELL-G-NRMINLFPGRKLD---YEHKHCQKQRSEEDFVTAIEFSPADPYGK 619 (867)
Q Consensus 568 ~dg~l~El~-~-~~Pl~fi~Gr~~~---fE~k~~~~~~~ge~FVT~V~~spe~pYGe 619 (867)
.+|.+|+.+ + +.|+.|..|.+.. ||.. +.++..|+.+ .|.++|+.+||+
T Consensus 45 ~dG~~fdss~~~~~p~~f~lG~~~vi~G~e~~-l~gm~~Ge~~--~v~ip~~~aYG~ 98 (135)
T 1r9h_A 45 ENGTKFDSSRDRGDQFSFNLGRGNVIKGWDLG-VATMTKGEVA--EFTIRSDYGYGD 98 (135)
T ss_dssp TTSCEEEEHHHHTSCEEEETTTTSSCHHHHHH-HTTCCBTCEE--EEEECGGGTTTT
T ss_pred CCCCEEEecCcCCCCEEEEeCCCCccHHHHHH-HhcCCCCCEE--EEEEChHHcCCC
Confidence 478999988 3 6999999998766 9999 9999999999 999999999998
No 43
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=92.94 E-value=0.063 Score=47.74 Aligned_cols=50 Identities=14% Similarity=0.150 Sum_probs=44.9
Q ss_pred CCCcceeec-C-CcceEEecCcccc---ccccccccccccCcceeeeeeCCCCcccce
Q 002906 568 KEGHLFELL-G-NRMINLFPGRKLD---YEHKHCQKQRSEEDFVTAIEFSPADPYGKA 620 (867)
Q Consensus 568 ~dg~l~El~-~-~~Pl~fi~Gr~~~---fE~k~~~~~~~ge~FVT~V~~spe~pYGea 620 (867)
.+|.+|+.+ + ++|+.|..|.+.. ||.. +.+++.|+.+ .|.++|+.+||++
T Consensus 21 ~dG~~~d~s~~~~~p~~f~lG~~~~i~g~~~~-l~gm~~Ge~~--~v~ip~~~ayG~~ 75 (102)
T 2pbc_A 21 EDGTEFDSSLPQNQPFVFSLGTGQVIKGWDQG-LLGMCEGEKR--KLVIPSELGYGER 75 (102)
T ss_dssp TTSCEEEESTTTTCCEEEETTSSSSCHHHHTT-STTCCTTCEE--EEEECGGGTTTTT
T ss_pred CCCCEEEeCCCCCCCEEEEeCCCCccHHHHHH-HhCCCCCCEE--EEEECHHHCcCCC
Confidence 578999988 3 6899999998766 9999 9999999999 8999999999987
No 44
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=92.87 E-value=0.051 Score=51.92 Aligned_cols=49 Identities=18% Similarity=0.244 Sum_probs=44.8
Q ss_pred CCcceeec--CCcceEEecCcccc---ccccccccccccCcceeeeeeCCCCcccce
Q 002906 569 EGHLFELL--GNRMINLFPGRKLD---YEHKHCQKQRSEEDFVTAIEFSPADPYGKA 620 (867)
Q Consensus 569 dg~l~El~--~~~Pl~fi~Gr~~~---fE~k~~~~~~~ge~FVT~V~~spe~pYGea 620 (867)
+|.+|+.+ .++|+.|..|.+.. ||.. +.++..|+.+ .|.++|+.+||++
T Consensus 67 dG~~fdss~~~~~p~~f~lG~g~~i~G~e~~-l~gm~~Ge~~--~v~ipp~~aYG~~ 120 (144)
T 3o5e_A 67 NGKKFDSSHDRNEPFVFSLGKGQVIKAWDIG-VATMKKGEIC--HLLCKPEYAYGSA 120 (144)
T ss_dssp TSCEEEESGGGTSCEEEETTSSSSCHHHHHH-HTTCCBTCEE--EEEECGGGTTTTT
T ss_pred CCCEEEeecccCCCeEEEeCCCcccHHHHHH-HhCCCCCCEE--EEEEChHHCcCCC
Confidence 78999988 47899999998776 9999 9999999999 9999999999997
No 45
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=92.32 E-value=0.072 Score=49.58 Aligned_cols=50 Identities=14% Similarity=0.222 Sum_probs=44.7
Q ss_pred CCCcceeec-C-CcceEEecCcccc---ccccccccccccCcceeeeeeCCCCcccce
Q 002906 568 KEGHLFELL-G-NRMINLFPGRKLD---YEHKHCQKQRSEEDFVTAIEFSPADPYGKA 620 (867)
Q Consensus 568 ~dg~l~El~-~-~~Pl~fi~Gr~~~---fE~k~~~~~~~ge~FVT~V~~spe~pYGea 620 (867)
.+|.+|+.+ . +.|+.|..|.+.. ||.. +.++..|+.+ .|.++|+.+||+.
T Consensus 50 ~dG~~fd~s~~~~~p~~f~lG~g~~i~g~e~~-l~gm~~Ge~~--~v~ip~~~aYG~~ 104 (129)
T 2vn1_A 50 STGKVFDSSFDRNVPFKFHLEQGEVIKGWDIC-VSSMRKNEKC--LVRIESMYGYGDE 104 (129)
T ss_dssp TTCCEEEEGGGTTCCEEEETTSSSSCHHHHHH-HTTCCTTCEE--EEEECGGGTTTTT
T ss_pred CCCeEEEecCCCCccEEEEeCCCCcCHHHHHH-HhCCCCCCEE--EEEEChHHcCCCC
Confidence 478999988 3 6899999998766 9999 9999999999 9999999999986
No 46
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=91.77 E-value=0.1 Score=47.32 Aligned_cols=51 Identities=14% Similarity=0.113 Sum_probs=45.0
Q ss_pred CCCcceeec-C-CcceEEecCcccc---ccccccccccccCcceeeeeeCCCCccccee
Q 002906 568 KEGHLFELL-G-NRMINLFPGRKLD---YEHKHCQKQRSEEDFVTAIEFSPADPYGKAI 621 (867)
Q Consensus 568 ~dg~l~El~-~-~~Pl~fi~Gr~~~---fE~k~~~~~~~ge~FVT~V~~spe~pYGea~ 621 (867)
.+|.+|+.+ + +.|+.|..|.+.. ||.. +.+++.|+.+ .|.++|+.+||++.
T Consensus 37 ~dG~~~d~s~~~~~p~~f~lG~~~~i~g~e~~-l~gm~~Ge~~--~v~ip~~~ayG~~~ 92 (113)
T 1yat_A 37 ENGQKFDSSVDRGSPFQCNIGVGQVIKGWDVG-IPKLSVGEKA--RLTIPGPYAYGPRG 92 (113)
T ss_dssp TTSCEEEESTTTTCCEEEETTSSSSCHHHHHH-GGGCCTTCEE--EEEECGGGTTTTTC
T ss_pred CCCCEEEecCCCCCcEEEEeCCCCccHHHHHH-HhCCCCCCEE--EEEECHHHCcCCCC
Confidence 478899988 3 5899999997766 9999 9999999999 99999999999873
No 47
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=91.59 E-value=0.077 Score=47.50 Aligned_cols=50 Identities=18% Similarity=0.338 Sum_probs=44.5
Q ss_pred CCcceeec-C-CcceEEecCcccc---ccccccccccccCcceeeeeeCCCCccccee
Q 002906 569 EGHLFELL-G-NRMINLFPGRKLD---YEHKHCQKQRSEEDFVTAIEFSPADPYGKAI 621 (867)
Q Consensus 569 dg~l~El~-~-~~Pl~fi~Gr~~~---fE~k~~~~~~~ge~FVT~V~~spe~pYGea~ 621 (867)
+|++|+.+ + ++|+.|..|.+.. ||.. +.+++.|+.+ .|.++|+.+||++.
T Consensus 32 dG~~~d~s~~~~~p~~f~lG~~~~i~g~~~~-l~gm~~Ge~~--~~~ip~~~ayG~~~ 86 (107)
T 2ppn_A 32 DGKKFDSSRDRNKPFKFMLGKQEVIRGWEEG-VAQMSVGQRA--KLTISPDYAYGATG 86 (107)
T ss_dssp TSCEEEEHHHHTSCEEEETTSCCSCHHHHHH-HTTCCTTCEE--EEEECGGGTTTTTC
T ss_pred CCCEEEecCCCCCCEEEEeCCCChHHHHHHH-HhCCCCCCEE--EEEECHHHccCCCC
Confidence 78899988 3 6899999997766 9999 9999999999 99999999999873
No 48
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=91.43 E-value=0.89 Score=42.07 Aligned_cols=103 Identities=17% Similarity=0.126 Sum_probs=63.9
Q ss_pred EEEEeeeccCCCccccCCCceEEEEeccCCCcccc-cccceeeeecccceeeEEEEeee----cceEEEEEEeeCCCccc
Q 002906 335 VFVEIVAVKNLPEDHKDKGDLFVFFSKSQPDIFFN-AKQKLTILSKSGMKQVASFQCEA----TGELLFELVSHSTSKIP 409 (867)
Q Consensus 335 v~~~iv~~~n~p~~~k~~~~~fvr~~~~q~d~~~~-~~~~~~~~s~~~~k~~~~~qCE~----t~~l~lel~~~~~~~~~ 409 (867)
+.|.|+.+++.....+ .+-||++.-...+.... -+..+.=+.+|.|.....|.-.. ...|.|+|.-+..
T Consensus 28 L~V~v~~a~~~d~~g~--sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~d~d~---- 101 (138)
T 1wfm_A 28 LFVTRLEAVTSNHDGG--CDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCDR---- 101 (138)
T ss_dssp EEEEEEEEECCCCSSC--CCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEEECCS----
T ss_pred EEEEEEEEEcCCCCCC--cceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEEECCC----
Confidence 4555677776544444 67899987532222111 11111123456777666666442 4578888887643
Q ss_pred ccCCccccceeeeecccccCCCCcceEeEEEeeccCCC
Q 002906 410 MTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSG 447 (867)
Q Consensus 410 ~~k~sk~~g~~s~~~~dll~~~~~Ls~e~w~~l~~~~~ 447 (867)
+.+...||.+.|++.+|... -..+.|++|.+...
T Consensus 102 -~~~dd~lG~~~i~l~~l~~~---~~~~~W~~L~~~~~ 135 (138)
T 1wfm_A 102 -FSRHSVAGELRLGLDGTSVP---LGAAQWGELKTSGP 135 (138)
T ss_dssp -SCTTSCSEEEEEESSSSSSC---TTCCEEEECCCCSC
T ss_pred -CCCCcEEEEEEEEcccccCc---ccccceeeCcCCCc
Confidence 56778999999999998532 25689999987643
No 49
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=91.17 E-value=1.5 Score=40.33 Aligned_cols=102 Identities=12% Similarity=0.075 Sum_probs=65.3
Q ss_pred EEEEeeeccCCCcccc-CCCceEEEEeccCCCc--ccccccceeeeecccceeeEEEE-eee----cceEEEEEEeeCCC
Q 002906 335 VFVEIVAVKNLPEDHK-DKGDLFVFFSKSQPDI--FFNAKQKLTILSKSGMKQVASFQ-CEA----TGELLFELVSHSTS 406 (867)
Q Consensus 335 v~~~iv~~~n~p~~~k-~~~~~fvr~~~~q~d~--~~~~~~~~~~~s~~~~k~~~~~q-CE~----t~~l~lel~~~~~~ 406 (867)
+.|.|+.++|||.... ...+-||+++-..... ...-++.+.=+.+|-|++...|. -.. ...|.|+|..+..
T Consensus 31 L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~- 109 (142)
T 2chd_A 31 LQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISVCDEDK- 109 (142)
T ss_dssp EEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEEEEEECT-
T ss_pred EEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEEEEECCC-
Confidence 5566789999986532 2368899988542111 11111112223467788766665 211 3689999987754
Q ss_pred cccccCCccccceeeeecccccCCCCcceEeEEEeecc
Q 002906 407 KIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVP 444 (867)
Q Consensus 407 ~~~~~k~sk~~g~~s~~~~dll~~~~~Ls~e~w~~l~~ 444 (867)
+.+...||.++|++++|.... ..+-|+.|.+
T Consensus 110 ----~~~d~~iG~~~i~l~~l~~~~---~~~~~~~L~~ 140 (142)
T 2chd_A 110 ----FGHNEFIGETRFSLKKLKANQ---RKNFNICLER 140 (142)
T ss_dssp ----TSCEEEEEEEEEEGGGCCTTC---CEEEEEECBC
T ss_pred ----CCCCcEEEEEEEEHHHcCCCC---ccEEEEeccc
Confidence 456789999999999998643 5777777643
No 50
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=91.04 E-value=0.13 Score=47.50 Aligned_cols=52 Identities=23% Similarity=0.233 Sum_probs=45.8
Q ss_pred CCCCcceeec-C---CcceEEecCcccc---ccccccccccccCcceeeeeeCCCCccccee
Q 002906 567 SKEGHLFELL-G---NRMINLFPGRKLD---YEHKHCQKQRSEEDFVTAIEFSPADPYGKAI 621 (867)
Q Consensus 567 s~dg~l~El~-~---~~Pl~fi~Gr~~~---fE~k~~~~~~~ge~FVT~V~~spe~pYGea~ 621 (867)
.++|.+|+.+ . ++|+.|..|.+.. ||.. +.++..|+.+ .|.++|+.+||+..
T Consensus 44 ~~dG~~fdss~~~~~~~p~~f~lG~~~~i~G~e~~-l~gm~~Ge~~--~~~ip~~~aYG~~g 102 (125)
T 4dip_A 44 EKDGSLFHSTHKHNNGQPIWFTLGILEALKGWDQG-LKGMCVGEKR--KLIIPPALGYGKEG 102 (125)
T ss_dssp TTTCCEEEEHHHHTTTCCEEEETTSCSSCHHHHHH-STTCCTTCEE--EEEECGGGTTTTTC
T ss_pred CCCCcEEEEcccCCCCcCEEEEeCCCChhHHHHHH-HhCCCCCCEE--EEEEChHHhcCCCC
Confidence 3488999988 2 6999999997766 9999 9999999999 99999999999984
No 51
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=91.01 E-value=0.12 Score=47.06 Aligned_cols=50 Identities=18% Similarity=0.297 Sum_probs=44.3
Q ss_pred CCCcceeec-C--------CcceEEecCcccc---ccccccccccccCcceeeeeeCCCCcccce
Q 002906 568 KEGHLFELL-G--------NRMINLFPGRKLD---YEHKHCQKQRSEEDFVTAIEFSPADPYGKA 620 (867)
Q Consensus 568 ~dg~l~El~-~--------~~Pl~fi~Gr~~~---fE~k~~~~~~~ge~FVT~V~~spe~pYGea 620 (867)
.+|.+|+.+ . ++|+.|..|.+.. ||.. +.++..|+.+ .|.++|+.+||+.
T Consensus 35 ~dG~~fdss~~~~~~~~~~~~p~~f~lG~~~~i~G~e~~-l~gm~~Ge~~--~v~ip~~~aYG~~ 96 (119)
T 3kz7_A 35 PDGTVFDTNIQTSSKKKKNAKPLSFKVGVGKVIRGWDEA-LLTMSKGEKA--RLEIEPEWAYGKK 96 (119)
T ss_dssp TTSCEEEECCCCSSSTTTTCCCEEEETTSSSSCHHHHHH-HTTCCTTCEE--EEEECGGGTTCTT
T ss_pred CCCCEEEeccccccccccCCCCEEEEECCCChhHHHHHH-HhCCCCCCEE--EEEECcHHhcCCC
Confidence 378889887 3 3899999998776 9999 9999999999 9999999999987
No 52
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=90.56 E-value=0.13 Score=48.26 Aligned_cols=51 Identities=12% Similarity=0.145 Sum_probs=45.1
Q ss_pred CCCcceeec-C-CcceEEecCcccc---ccccccccccccCcceeeeeeCCCCccccee
Q 002906 568 KEGHLFELL-G-NRMINLFPGRKLD---YEHKHCQKQRSEEDFVTAIEFSPADPYGKAI 621 (867)
Q Consensus 568 ~dg~l~El~-~-~~Pl~fi~Gr~~~---fE~k~~~~~~~ge~FVT~V~~spe~pYGea~ 621 (867)
.+|.+|+.+ + +.|+.|..|.+.. ||.. +.+++.|+.+ .|.++|+.+||++.
T Consensus 55 ~dG~~fdss~~~~~p~~f~lG~g~vi~G~e~a-L~gm~~Ge~~--~v~ip~~~aYG~~~ 110 (130)
T 2lgo_A 55 PDGKQFDSSRSRGKPFQFTLGAGEVIKGWDQG-VATMTLGEKA--LFTIPYQLAYGERG 110 (130)
T ss_dssp TTSCEEECTTTTTCCEEEETTSTTSCHHHHHH-HHHSCTTEEE--EEEECTTTSTTTTC
T ss_pred CCCCEEEccCcCCCCEEEEeCCCCccHHHHHH-HhCCCCCCEE--EEEECcHHHCCCCC
Confidence 478999988 3 4899999997766 9999 9999999999 99999999999873
No 53
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=90.56 E-value=0.15 Score=48.24 Aligned_cols=51 Identities=16% Similarity=0.231 Sum_probs=45.3
Q ss_pred CCCcceeec-C-CcceEEecCcccc---ccccccccccccCcceeeeeeCCCCccccee
Q 002906 568 KEGHLFELL-G-NRMINLFPGRKLD---YEHKHCQKQRSEEDFVTAIEFSPADPYGKAI 621 (867)
Q Consensus 568 ~dg~l~El~-~-~~Pl~fi~Gr~~~---fE~k~~~~~~~ge~FVT~V~~spe~pYGea~ 621 (867)
.+|.+|+.+ + ++|+.|..|.+.. ||.. +.+++.|+.+ .|.++|+.+||++.
T Consensus 58 ~dG~~fdss~~~~~p~~f~lG~g~vi~G~eea-L~gmk~Ge~~--~v~ip~~~aYG~~~ 113 (133)
T 2y78_A 58 TDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEG-VQGMKVGGVR--RLTIPPQLGYGARG 113 (133)
T ss_dssp TTSCEEEETTTTTCCEEEETTSSSSCHHHHHH-STTCBTTCEE--EEEECGGGTTTTTC
T ss_pred CCCCEEeccCcCCCCEEEEeCCCChhHHHHHH-HcCCCCCCEE--EEEECcHHhCCCCC
Confidence 478899988 3 6899999998766 9999 9999999999 99999999999873
No 54
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=90.04 E-value=1 Score=46.11 Aligned_cols=106 Identities=15% Similarity=0.198 Sum_probs=66.7
Q ss_pred EEEEEeeeccCCCcccc-CCCceEEEEeccCCCcc-cccccc-eeeeecccceeeEEEEeee----cceEEEEEEeeCCC
Q 002906 334 EVFVEIVAVKNLPEDHK-DKGDLFVFFSKSQPDIF-FNAKQK-LTILSKSGMKQVASFQCEA----TGELLFELVSHSTS 406 (867)
Q Consensus 334 ev~~~iv~~~n~p~~~k-~~~~~fvr~~~~q~d~~-~~~~~~-~~~~s~~~~k~~~~~qCE~----t~~l~lel~~~~~~ 406 (867)
++.|.|+.++||+.... ...+-||++.-...... ...+.+ ..=+.++.|+..-.|.... ...|.|+|.-+..
T Consensus 151 ~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~- 229 (284)
T 2r83_A 151 KLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDK- 229 (284)
T ss_dssp EEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEEEEEECCS-
T ss_pred ceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCceEEEEEEEeCCC-
Confidence 35666789999986422 23678999884421111 111111 1112457777666666642 3468888887653
Q ss_pred cccccCCccccceeeeecc----------cccCCCCcceEeEEEeeccC
Q 002906 407 KIPMTGASKTMGTASLSLQ----------NFISPISKLAVEQWFDLVPR 445 (867)
Q Consensus 407 ~~~~~k~sk~~g~~s~~~~----------dll~~~~~Ls~e~w~~l~~~ 445 (867)
+.+..+||.+.|+++ +|+.. +.-.+++|+.|.+.
T Consensus 230 ----~~~~~~iG~~~i~l~~~~~~~~~w~~~~~~-~~~~~~~W~~L~~~ 273 (284)
T 2r83_A 230 ----IGKNDAIGKVFVGYNSTGAELRHWSDMLAN-PRRPIAQWHTLQVE 273 (284)
T ss_dssp ----SSCCCEEEEEEEETTCCHHHHHHHHHHHHS-TTSCEEEEEECBCH
T ss_pred ----CCCCcEEEEEEECCCCCCcHHHHHHHHHHC-CCCchheeeecCCc
Confidence 567889999999865 45544 45678899999764
No 55
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=89.90 E-value=0.14 Score=48.26 Aligned_cols=52 Identities=17% Similarity=0.083 Sum_probs=40.5
Q ss_pred CCCCcceeec-C-CcceEEecCcccc---ccccccccccccCcceeeeeeCCCCccccee
Q 002906 567 SKEGHLFELL-G-NRMINLFPGRKLD---YEHKHCQKQRSEEDFVTAIEFSPADPYGKAI 621 (867)
Q Consensus 567 s~dg~l~El~-~-~~Pl~fi~Gr~~~---fE~k~~~~~~~ge~FVT~V~~spe~pYGea~ 621 (867)
.++|.+|+.+ . ++|+.|..|.+.. ||.. +.++..|+.+ .|.++|+.+||++.
T Consensus 56 ~~~G~~fdss~~~~~p~~f~lG~g~~i~G~e~a-L~gm~~Ge~~--~v~ip~~~aYG~~~ 112 (134)
T 3b7x_A 56 EHMDRPFDSNYFRKTPRLMKLGEDITLWGMELG-LLSMRRGELA--RFLFKPNYAYGTLG 112 (134)
T ss_dssp TTCSSCSEEC-------CEEC-CCCCCHHHHHH-HHTCEETCEE--EEEECGGGTTTTTC
T ss_pred CCCCeEEEecCCCCCCEEEEcCCcchhHHHHHH-HhCCCCCCEE--EEEECHHHCcCCCC
Confidence 3468899988 3 6899999999765 9999 9999999999 99999999999873
No 56
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=88.50 E-value=4.4 Score=37.54 Aligned_cols=95 Identities=16% Similarity=0.111 Sum_probs=60.9
Q ss_pred EEEEeeeccCCCccccCCCceEEEEeccCCCcccccccceeeeecccceeeEEEEee-ecceEEEEEEeeCCCcccccCC
Q 002906 335 VFVEIVAVKNLPEDHKDKGDLFVFFSKSQPDIFFNAKQKLTILSKSGMKQVASFQCE-ATGELLFELVSHSTSKIPMTGA 413 (867)
Q Consensus 335 v~~~iv~~~n~p~~~k~~~~~fvr~~~~q~d~~~~~~~~~~~~s~~~~k~~~~~qCE-~t~~l~lel~~~~~~~~~~~k~ 413 (867)
+.|.|+++++++...+ .+-||.++ .| .. +.+....=+.+|-|.+.-.|.-. +...|.|+|.-+. +.+
T Consensus 7 L~V~V~~A~~l~~~g~--~DPYv~v~-~~--~~-kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d------~~~ 74 (131)
T 2cjt_A 7 LCVGVKKAKFDGAQEK--FNTYVTLK-VQ--NV-KSTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG------LIW 74 (131)
T ss_dssp EEEEEEEEECSSCGGG--CEEEEEEE-ET--TE-EEECCCEESSSCEEEEEEEEEECCCSSEEEEEEEECC------SSC
T ss_pred EEEEEEEeECCCCCCC--cCeEEEEE-ec--CE-EEeEecCCCCCceECCEEEEEEeCCCCeEEEEEEECC------CCC
Confidence 5667788888876444 78999998 22 11 11111111346788877666665 4567889888775 246
Q ss_pred ccccceeeeecccccCCCCcceEeEEEee
Q 002906 414 SKTMGTASLSLQNFISPISKLAVEQWFDL 442 (867)
Q Consensus 414 sk~~g~~s~~~~dll~~~~~Ls~e~w~~l 442 (867)
...||.++|+++++.... .-....|.+|
T Consensus 75 dd~iG~~~i~l~~l~~~~-~~~~~~~~~~ 102 (131)
T 2cjt_A 75 DTMVGTVWIPLRTIRQSN-EEGPGEWLTL 102 (131)
T ss_dssp EEEEEEEEEEGGGSCBCS-SCCCCEEEEC
T ss_pred CCeEEEEEEEHHHhhhcC-CCCccccEEc
Confidence 789999999999997653 1122245554
No 57
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=87.94 E-value=0.2 Score=46.26 Aligned_cols=48 Identities=13% Similarity=0.198 Sum_probs=41.5
Q ss_pred CCcceeecCCcceEEecCcccc---ccccccccccccCcceeeeeeC-CCCcccce
Q 002906 569 EGHLFELLGNRMINLFPGRKLD---YEHKHCQKQRSEEDFVTAIEFS-PADPYGKA 620 (867)
Q Consensus 569 dg~l~El~~~~Pl~fi~Gr~~~---fE~k~~~~~~~ge~FVT~V~~s-pe~pYGea 620 (867)
+|..|+.+...|+.|..|.+.. ||+. +.+++.|+.+ .|.++ |++ ||..
T Consensus 45 dG~~fdss~~~p~~f~lG~g~vi~G~ee~-L~Gmk~Ge~~--~v~i~fP~~-Yg~~ 96 (113)
T 1hxv_A 45 DNKKLASASAQNYELTIGSNSFIKGFETG-LIAMKVNQKK--TLALTFPSD-YHVK 96 (113)
T ss_dssp TTEECSTTCCSEEEEEETSSCSCTTHHHH-HHTSCSSEEE--EECCCCCTT-SSSS
T ss_pred CCEEcccCCccCEEEEECCCChhHHHHHH-HCCCCCCCEE--EEEEeCchh-hCcC
Confidence 7889998877899999998766 9999 9999999999 88887 666 9975
No 58
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=87.74 E-value=0.18 Score=49.96 Aligned_cols=50 Identities=16% Similarity=0.143 Sum_probs=45.0
Q ss_pred CCCCcceeec--CCcceEEecCcccc---ccccccccccccCcceeeeeeCCCCcccc
Q 002906 567 SKEGHLFELL--GNRMINLFPGRKLD---YEHKHCQKQRSEEDFVTAIEFSPADPYGK 619 (867)
Q Consensus 567 s~dg~l~El~--~~~Pl~fi~Gr~~~---fE~k~~~~~~~ge~FVT~V~~spe~pYGe 619 (867)
.++|.+|+++ .++|++|..|.++. |+.. +..+..|+.. .|.++|+.+||.
T Consensus 43 d~~G~~FDsS~~rg~P~~f~lG~g~vI~Gwd~g-l~~M~~Ge~~--~~~ipp~laYG~ 97 (165)
T 2lkn_A 43 DDEGTVLDDSRARGKPMELIIGKKFKLPVWETI-VCTMREGEIA--QFLCDIKHVVLY 97 (165)
T ss_dssp SSSCCEEEESTTTTCCEEEESSSSCSCSHHHHH-HTTCCTTCEE--EEECCHHHHSSH
T ss_pred CCCccEEEecccCCCCEEEEecCCCccHHHHHH-HhcCccCceE--EEEECHHHhcCC
Confidence 3579999999 47999999998877 9999 9999999999 999999999994
No 59
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=87.25 E-value=0.3 Score=49.68 Aligned_cols=51 Identities=16% Similarity=0.223 Sum_probs=45.9
Q ss_pred CCCcceeec--CCcceEEecCcccc---ccccccccccccCcceeeeeeCCCCccccee
Q 002906 568 KEGHLFELL--GNRMINLFPGRKLD---YEHKHCQKQRSEEDFVTAIEFSPADPYGKAI 621 (867)
Q Consensus 568 ~dg~l~El~--~~~Pl~fi~Gr~~~---fE~k~~~~~~~ge~FVT~V~~spe~pYGea~ 621 (867)
.+|.+|+.+ .+.|+.|..|.+.. ||.. +.++..|+.+ .|.++|+.+||++.
T Consensus 134 ~dG~~fdss~~~~~P~~f~lG~g~vi~G~eea-L~gM~~Ge~~--~v~Ipp~~aYG~~g 189 (209)
T 3uf8_A 134 TDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEG-VQGMKVGGVR--RLTIPPQLGYGARG 189 (209)
T ss_dssp TTSCEEEESGGGTCCEEEETTSSSSCHHHHHH-HTTCBTTCEE--EEEECGGGTTTTTC
T ss_pred CCCCEEEEccccCCCEEEEeCCCccchhHHHH-HhCCCCCCEE--EEEECcHHhCCCCC
Confidence 478999988 47899999999766 9999 9999999999 99999999999983
No 60
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=87.00 E-value=0.46 Score=47.17 Aligned_cols=52 Identities=21% Similarity=0.220 Sum_probs=44.8
Q ss_pred CCCCcceeec--CCcceEEecCcc-cc---ccccccccccccCcceeeeeeCCCCccccee
Q 002906 567 SKEGHLFELL--GNRMINLFPGRK-LD---YEHKHCQKQRSEEDFVTAIEFSPADPYGKAI 621 (867)
Q Consensus 567 s~dg~l~El~--~~~Pl~fi~Gr~-~~---fE~k~~~~~~~ge~FVT~V~~spe~pYGea~ 621 (867)
.++|.+|+.+ .++|+.|..|.+ .. |+.. +.++..|+.+ .|.++|+.+||++.
T Consensus 79 ~~dG~~fdss~~~~~p~~f~lG~g~~vi~G~eea-L~gMk~Ge~~--~v~iPp~~aYG~~g 136 (180)
T 2f4e_A 79 KNSQHKFEDTWHEQQPIELVLGKEKKELAGLAIG-VASMKSGERA--LVHVGWELAYGKEG 136 (180)
T ss_dssp TTTCCEEEETTTTTCCEEEETTSCCGGGHHHHHH-HTTCCBTCEE--EEEECGGGTTTTTC
T ss_pred CCCCcEEeccCccCCCEEEEeCCCCchhHHHHHH-HhCCCCCCEE--EEEECchHhCCcCC
Confidence 3468899988 478999999986 33 9999 9999999999 99999999999763
No 61
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=86.54 E-value=5.7 Score=41.23 Aligned_cols=122 Identities=14% Similarity=0.173 Sum_probs=73.0
Q ss_pred EEEEEeeeccCCCcccc-CCCceEEEEeccCCCcc-cccccceeeeecccceeeEEEEeee----cceEEEEEEeeCCCc
Q 002906 334 EVFVEIVAVKNLPEDHK-DKGDLFVFFSKSQPDIF-FNAKQKLTILSKSGMKQVASFQCEA----TGELLFELVSHSTSK 407 (867)
Q Consensus 334 ev~~~iv~~~n~p~~~k-~~~~~fvr~~~~q~d~~-~~~~~~~~~~s~~~~k~~~~~qCE~----t~~l~lel~~~~~~~ 407 (867)
++.|.|+.++|||.... ...+-||++.-+ +|.- ..-++.+.=+.+|.|.+...|.... ...|.|+|..+..
T Consensus 21 ~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~-~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d~-- 97 (296)
T 1dqv_A 21 QLVVRILQALDLPAKDSNGFSDPYVKIYLL-PDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVYDFDR-- 97 (296)
T ss_dssp EEEEEEEEEECCCCCSTTSCCCEEEEEECT-TSTTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEEEEEECCS--
T ss_pred EEEEEEEEeECCCCcCCCCCcCeEEEEEEE-cCCCeeEeCCccCCCCCCcEeeEEEEEecHHHhcCCEEEEEEEEcCC--
Confidence 46677899999986532 336789998854 3321 1111111123467888777777642 3478899887653
Q ss_pred ccccCCccccceeeee-cccccCCCCcceEeEEEeeccCCCCCCCCCeeEEEEEeecC
Q 002906 408 IPMTGASKTMGTASLS-LQNFISPISKLAVEQWFDLVPRSGNVSSKPISLRIAVSFTI 464 (867)
Q Consensus 408 ~~~~k~sk~~g~~s~~-~~dll~~~~~Ls~e~w~~l~~~~~~~~~~p~~lrv~~S~Tp 464 (867)
+.+...||.+.|+ +.++... .-..+.|++|.+..... ...=.|.+.++..|
T Consensus 98 ---~~~~~~iG~~~i~~l~~~~~~--~~~~~~w~~L~~~~~~~-~~~G~i~vsl~y~~ 149 (296)
T 1dqv_A 98 ---FSRHDLIGQVVLDNLLELAEQ--PPDRPLWRDILEGGSEK-ADLGELNFSLCYLP 149 (296)
T ss_dssp ---SSCCCEEEEEECCCTTGGGSS--CSSCCCCEECBCCSSCC-SCCCEEEEEEEEET
T ss_pred ---CCCCceEEEEEeccccccccC--Cccceeeeccccccccc-cccceEEEEEEecc
Confidence 5677899999995 5555532 12457899997653321 11224555555443
No 62
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=86.15 E-value=0.32 Score=45.37 Aligned_cols=51 Identities=12% Similarity=0.204 Sum_probs=43.9
Q ss_pred CCCcceeec-C-CcceEEecCcccc---cccccccc------ccccCcceeeeeeCCCCccccee
Q 002906 568 KEGHLFELL-G-NRMINLFPGRKLD---YEHKHCQK------QRSEEDFVTAIEFSPADPYGKAI 621 (867)
Q Consensus 568 ~dg~l~El~-~-~~Pl~fi~Gr~~~---fE~k~~~~------~~~ge~FVT~V~~spe~pYGea~ 621 (867)
.+|.+|+.+ + ++|+.|..|.+.. ||.. +.+ ++.|+.+ .|.++|+.+||++.
T Consensus 42 ~dG~~fdss~~~~~p~~f~lG~~~~i~G~~~~-L~G~~~~~~m~~Ge~~--~v~ip~~~aYG~~~ 103 (129)
T 1u79_A 42 ENGKVFDSSYNRGKPLTFRIGVGEVIKGWDQG-ILGSDGIPPMLTGGKR--TLRIPPELAYGDRG 103 (129)
T ss_dssp TTSCEEEEHHHHTSCEEEETTSSSSCHHHHHH-HHCBTTBCCCBTTCEE--EEEECGGGTTGGGC
T ss_pred CCCCEEEecCCCCCCEEEEeCCCCccHHHHHH-hcccccccccCCCCEE--EEEEChHHccCCCC
Confidence 378899988 3 7899999997766 8888 766 8999998 99999999999984
No 63
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=86.06 E-value=0.25 Score=46.57 Aligned_cols=48 Identities=10% Similarity=-0.017 Sum_probs=41.6
Q ss_pred CCcceeecCCcceEEecCcccc---ccccccccccccCcceeeeeeCCCCccccee
Q 002906 569 EGHLFELLGNRMINLFPGRKLD---YEHKHCQKQRSEEDFVTAIEFSPADPYGKAI 621 (867)
Q Consensus 569 dg~l~El~~~~Pl~fi~Gr~~~---fE~k~~~~~~~ge~FVT~V~~spe~pYGea~ 621 (867)
+|.+|+. ++|+.|..|.+.. ||.. +.++..|+.+ .|.++|+.+||++.
T Consensus 50 dG~~fds--~~p~~f~lG~g~~i~G~e~~-L~gm~~Ge~~--~v~ip~~~aYG~~~ 100 (135)
T 2d9f_A 50 NGTRVQE--EPELVFTLGDCDVIQALDLS-VPLMDVGETA--MVTADSKYCYGPQG 100 (135)
T ss_dssp SSCEEEE--EEEEEEETTSCCSCTTTTTT-GGGSCTTCEE--EEEECHHHHTCTTC
T ss_pred CCCEEec--CCCEEEEeCCCChhHHHHHH-HhCCCCCCEE--EEEEChhHccCcCC
Confidence 6777875 5899999998766 9999 9999999999 99999999999763
No 64
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=85.14 E-value=0.39 Score=43.92 Aligned_cols=49 Identities=10% Similarity=-0.008 Sum_probs=42.1
Q ss_pred CCCcceeecCCcceEEecCcccc---ccccccccccccCcceeeeeeCCCCccccee
Q 002906 568 KEGHLFELLGNRMINLFPGRKLD---YEHKHCQKQRSEEDFVTAIEFSPADPYGKAI 621 (867)
Q Consensus 568 ~dg~l~El~~~~Pl~fi~Gr~~~---fE~k~~~~~~~ge~FVT~V~~spe~pYGea~ 621 (867)
.+|..|+. ++|+.|..|.+.. ||.. +.+++.|+.+ .|.++|+.+||++.
T Consensus 45 ~dG~~~ds--~~p~~f~lG~~~~i~g~e~~-l~gm~~Ge~~--~~~ip~~~ayG~~~ 96 (118)
T 2awg_A 45 ENGTRVQE--EPELVFTLGDCDVIQALDLS-VPLMDVGETA--MVTADSKYCYGPQG 96 (118)
T ss_dssp TTSCEEEE--EEEEEEETTSSCSCHHHHHH-GGGSCTTCEE--EEEECGGGTTTTTC
T ss_pred CCCCEEEC--CCCEEEEECCCChhHHHHHH-HhCCCCCCEE--EEEEChHHccCCCC
Confidence 36777876 4899999998766 9999 9999999999 99999999999873
No 65
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=84.97 E-value=4.7 Score=39.28 Aligned_cols=116 Identities=16% Similarity=0.170 Sum_probs=67.1
Q ss_pred EEEEEEeeeccCCCccccCCCceEEEEeccCCCccccccccee-eeecccceeeEEEEee----e--cceEEEEEEeeCC
Q 002906 333 VEVFVEIVAVKNLPEDHKDKGDLFVFFSKSQPDIFFNAKQKLT-ILSKSGMKQVASFQCE----A--TGELLFELVSHST 405 (867)
Q Consensus 333 vev~~~iv~~~n~p~~~k~~~~~fvr~~~~q~d~~~~~~~~~~-~~s~~~~k~~~~~qCE----~--t~~l~lel~~~~~ 405 (867)
|.+-|-|..+++||-.+. .-.=|.||.. + +-++.+. -.-++-|. ..|.+. . .-.|.++|..+..
T Consensus 21 msL~V~l~~a~~Lpg~~D--p~akv~FRg~---k--~kTkvi~~~~~npvfn--E~F~wpl~~~ld~~e~L~v~V~d~~~ 91 (144)
T 3l9b_A 21 MALIVHLKTVSELRGRAD--RIAKVTFRGQ---S--FYSRVLENCEDVADFD--ETFRWPVASSIDRNEVLEIQIFNYSK 91 (144)
T ss_dssp EEEEEEEEEEESCCSCEE--EEEEEEETTE---E--EECCCEEEECSCEEEE--EEEEEEESSCCCTTCEEEEEEEEECT
T ss_pred EEEEEEEEEecCCCCCCC--CeEEEEEecc---c--eeeEEeccCCCCceEc--ceEEecCCCCCCCCCEEEEEEEECcc
Confidence 445555688889995443 2223333311 1 1122232 22234444 245554 2 2345555555543
Q ss_pred CcccccCCccccceeeeecccccCCCCcceEeEEEeeccCCCCCCCCCeeEEEEEeecCCCC
Q 002906 406 SKIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNVSSKPISLRIAVSFTIPTL 467 (867)
Q Consensus 406 ~~~~~~k~sk~~g~~s~~~~dll~~~~~Ls~e~w~~l~~~~~~~~~~p~~lrv~~S~TpPv~ 467 (867)
+-+.++||++.+++|+|.... .|++ +.+|...+.... +..+-+.++-.||--
T Consensus 92 -----v~~nrlIG~~~i~Lq~lv~~~-~l~l--~~~LvD~n~~~~--~a~I~l~l~Y~pp~g 143 (144)
T 3l9b_A 92 -----VFSNKLIGTFRMVLQKVVEEN-RVEV--SDTLIDDNNAII--KTSLSMEVRYQAADG 143 (144)
T ss_dssp -----TSCCEEEEEEEEESHHHHHHS-EEEE--EEEEECTTSCEE--EEEEEEEEEEEETTC
T ss_pred -----ccCCCEEEEEEEEhHHhccCC-eEEE--eecccCCCCCcc--ccEEEEEEEecCCCC
Confidence 446799999999999999884 6665 467766654332 257888888888854
No 66
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=84.48 E-value=0.62 Score=49.24 Aligned_cols=49 Identities=16% Similarity=0.232 Sum_probs=43.5
Q ss_pred CCCcceeec-C-CcceEEecCcccc---ccccccccccccCcceeeeeeCCCCcccc
Q 002906 568 KEGHLFELL-G-NRMINLFPGRKLD---YEHKHCQKQRSEEDFVTAIEFSPADPYGK 619 (867)
Q Consensus 568 ~dg~l~El~-~-~~Pl~fi~Gr~~~---fE~k~~~~~~~ge~FVT~V~~spe~pYGe 619 (867)
.+|.+|+.+ + +.|+.|..|.+.. ||.. +.+++.|+.+ .|.++|+.+||+
T Consensus 82 ~dG~~fdss~~~~~p~~f~lG~g~vi~G~e~a-L~gm~~Ge~~--~v~ipp~~aYG~ 135 (280)
T 1q1c_A 82 LDGTKFDSSLDRKDKFSFDLGKGEVIKAWDIA-IATMKVGEVC--HITCKPEYAYGS 135 (280)
T ss_dssp TTSCEEEESTTSSSCEEEETTTTSSCHHHHHH-HTTCCTTCEE--EEEECGGGTTTT
T ss_pred CCCCEEEecccCCCCEEEEECCcChhHHHHHH-HhcCCCCCEE--EEEECcHHhCCC
Confidence 478899988 3 5899999998766 9999 9999999999 999999999995
No 67
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=84.18 E-value=0.62 Score=50.51 Aligned_cols=49 Identities=12% Similarity=0.219 Sum_probs=44.1
Q ss_pred CCcceeec---CCcceEEecCcccc---ccccccccccccCcceeeeeeCCCCcccce
Q 002906 569 EGHLFELL---GNRMINLFPGRKLD---YEHKHCQKQRSEEDFVTAIEFSPADPYGKA 620 (867)
Q Consensus 569 dg~l~El~---~~~Pl~fi~Gr~~~---fE~k~~~~~~~ge~FVT~V~~spe~pYGea 620 (867)
||.+|+.+ .++|+.|..|.++. ||.. +.++..|+.+ .|.++|+++||++
T Consensus 276 dG~~fd~~~~~~~~p~~f~~G~g~~i~G~e~~-l~gm~~Ge~~--~v~ip~~~aYG~~ 330 (356)
T 3jxv_A 276 DGTVFLKKGHDEQEPFEFKTDEEAVIEGLDRA-VLNMKKGEVA--LVTIPPEYAYGST 330 (356)
T ss_dssp SSCEEEEESCTTSCCCEEETTTTSSCHHHHHH-HTTCCBTCEE--EEEECGGGTTTTS
T ss_pred CCCEEeeccccCCcCEEEEECCCccchHHHHH-HhCCCCCCEE--EEEEChHHccCCC
Confidence 68888877 37899999998766 9999 9999999999 9999999999976
No 68
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=83.34 E-value=0.69 Score=50.88 Aligned_cols=49 Identities=16% Similarity=0.226 Sum_probs=37.0
Q ss_pred CCCcceeec--CCcceEEecCcccc---ccccccccccccCcceeeeeeCCCCcccc
Q 002906 568 KEGHLFELL--GNRMINLFPGRKLD---YEHKHCQKQRSEEDFVTAIEFSPADPYGK 619 (867)
Q Consensus 568 ~dg~l~El~--~~~Pl~fi~Gr~~~---fE~k~~~~~~~ge~FVT~V~~spe~pYGe 619 (867)
.+|.+|+.+ .+.|+.|..|.+.. ||.. +.++..|+.+ .|.++|+.+||+
T Consensus 62 ~~g~~~dss~~~~~p~~~~~g~~~~i~g~~~~-l~~m~~Ge~~--~~~i~~~~~yg~ 115 (457)
T 1kt0_A 62 SNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIG-VATMKRGEIC--HLLCKPEYAYGS 115 (457)
T ss_dssp -----CBC------CEEEETTSTTSCHHHHHH-HTTCCTTCEE--EEEECGGGTTTT
T ss_pred CCCCEEeccCCCCCCeEEEeCCcchhhHHHHH-HhhCCCCCEE--EEEEChHHhccc
Confidence 579999988 36899999998776 9999 9999999999 999999999993
No 69
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=82.87 E-value=5.5 Score=38.70 Aligned_cols=84 Identities=15% Similarity=0.065 Sum_probs=56.4
Q ss_pred EEEEeeeccCCCccccCCCceEEEEeccCCCcccccccceeeeecccceeeEEEEee-ecceEEEEEEeeCCCcccccCC
Q 002906 335 VFVEIVAVKNLPEDHKDKGDLFVFFSKSQPDIFFNAKQKLTILSKSGMKQVASFQCE-ATGELLFELVSHSTSKIPMTGA 413 (867)
Q Consensus 335 v~~~iv~~~n~p~~~k~~~~~fvr~~~~q~d~~~~~~~~~~~~s~~~~k~~~~~qCE-~t~~l~lel~~~~~~~~~~~k~ 413 (867)
+.|.++++++++...+ .+-||.++ .| .. +.+....=..+|.|.+.-.|.-. +...|.|+|.-+. +.+
T Consensus 16 L~V~V~~A~~l~~~g~--~DPYV~v~-~~--~~-kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d------~~~ 83 (167)
T 2cjs_A 16 LCVGVKKAKFDGAQEK--FNTYVTLK-VQ--NV-ESTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG------LIW 83 (167)
T ss_dssp EEEEEEEEECSSCGGG--CEEEEEEE-ET--TE-EEECCCEESSSCEEEEEEEEECCCTTSEEEEEEEECC------SSC
T ss_pred EEEEEEEEECCCCCCC--CCeEEEEE-ec--ce-EEEEecCCCCCCCCCCEEEEEeeCCCCEEEEEEEECC------CCC
Confidence 5566788888875444 68899998 22 11 11110011346788876666665 4567999988774 246
Q ss_pred ccccceeeeecccccCC
Q 002906 414 SKTMGTASLSLQNFISP 430 (867)
Q Consensus 414 sk~~g~~s~~~~dll~~ 430 (867)
...||++.|+++++...
T Consensus 84 dd~iG~~~i~L~~l~~~ 100 (167)
T 2cjs_A 84 DTMVGTVWIPLRTIRQS 100 (167)
T ss_dssp CEEEEEEEEEGGGSCBC
T ss_pred CceEEEEEEEHHHhccc
Confidence 88999999999999764
No 70
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0
Probab=81.93 E-value=0.63 Score=47.99 Aligned_cols=48 Identities=10% Similarity=0.225 Sum_probs=43.4
Q ss_pred CCCcceeecCCcceEEecCcccc--ccccccccccccCcceeeeeeCCCCcccce
Q 002906 568 KEGHLFELLGNRMINLFPGRKLD--YEHKHCQKQRSEEDFVTAIEFSPADPYGKA 620 (867)
Q Consensus 568 ~dg~l~El~~~~Pl~fi~Gr~~~--fE~k~~~~~~~ge~FVT~V~~spe~pYGea 620 (867)
.||.+|+.+ +.|+.|..| .++ |+.. +.++..|+.+ .|.++|+.+||+.
T Consensus 147 ~dG~vfDss-~~P~~f~lG-~vI~G~eea-L~gMk~Gek~--~v~IPp~lAYG~~ 196 (219)
T 3oe2_A 147 PDGKIFDQS-TQPQWFRLD-SVISGWTSA-LQNMPTGAKW--RLVIPSDQAYGAE 196 (219)
T ss_dssp TTSCEEEEC-SSCEEEEGG-GSCHHHHHH-HTTCCTTCEE--EEEECGGGTTTTT
T ss_pred CCCCEeecc-CCcEEEEec-chhHHHHHH-HhCCCCCCEE--EEEECchhcCCCC
Confidence 489999988 899999999 444 9999 9999999999 9999999999998
No 71
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}
Probab=81.42 E-value=0.59 Score=45.67 Aligned_cols=49 Identities=10% Similarity=-0.008 Sum_probs=41.9
Q ss_pred CCCcceeecCCcceEEecCcccc---ccccccccccccCcceeeeeeCCCCccccee
Q 002906 568 KEGHLFELLGNRMINLFPGRKLD---YEHKHCQKQRSEEDFVTAIEFSPADPYGKAI 621 (867)
Q Consensus 568 ~dg~l~El~~~~Pl~fi~Gr~~~---fE~k~~~~~~~ge~FVT~V~~spe~pYGea~ 621 (867)
.||.+|+. ++|+.|..|.+.. |+.. +.++..|+.+ .|.++|+.+||++.
T Consensus 75 ~dG~~fds--~~p~~f~lG~g~vi~G~eea-L~gMk~Ge~~--~v~IP~~~aYG~~g 126 (157)
T 2jwx_A 75 ENGTRVQE--EPELVFTLGDCDVIQALDLS-VPLMDVGETA--MVTADSKYCYGPQG 126 (157)
T ss_dssp TTSCEEEE--EEEEEEETTTTSSCHHHHHH-TTTSCTTCEE--EEEECGGGTTTTTC
T ss_pred CCCCEeec--CCCEEEEeCCCChhHHHHHH-HcCCCCCCEE--EEEECchhcCCccc
Confidence 36778886 4899999997655 9999 9999999999 99999999999874
No 72
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=80.81 E-value=1.1 Score=46.61 Aligned_cols=107 Identities=19% Similarity=0.259 Sum_probs=64.6
Q ss_pred EEEEEeeeccCCCccc-cCCCceEEEEeccCCCcccccccceee---eecccceeeEEEEeee----cceEEEEEEeeCC
Q 002906 334 EVFVEIVAVKNLPEDH-KDKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQCEA----TGELLFELVSHST 405 (867)
Q Consensus 334 ev~~~iv~~~n~p~~~-k~~~~~fvr~~~~q~d~~~~~~~~~~~---~s~~~~k~~~~~qCE~----t~~l~lel~~~~~ 405 (867)
++.|.|+.++||+... ....+-||++.-....... .+.+..+ +.++-|+....|.... ...|.|+|..+..
T Consensus 153 ~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~-~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~ 231 (296)
T 1dqv_A 153 LLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRL-KKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVDYDC 231 (296)
T ss_dssp EEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTT-SCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCCEEEECCS
T ss_pred eeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCc-cceecceecCCCCCeECceEEEEcCHHHccCcEEEEEEEeCCC
Confidence 3556678999997542 2235899999855321111 1112221 2356676544444432 2468888887753
Q ss_pred CcccccCCccccceeeee-----------cccccCCCCcceEeEEEeeccCCC
Q 002906 406 SKIPMTGASKTMGTASLS-----------LQNFISPISKLAVEQWFDLVPRSG 447 (867)
Q Consensus 406 ~~~~~~k~sk~~g~~s~~-----------~~dll~~~~~Ls~e~w~~l~~~~~ 447 (867)
+.+...||.+.|+ |.+|+.. +.-.+++|..|.+..+
T Consensus 232 -----~~~~~~iG~~~i~l~~~~~~~~~~W~~~~~~-~~~~~~~w~~L~~~~~ 278 (296)
T 1dqv_A 232 -----IGHNEVIGVCRVGPEAADPHGREHWAEMLAN-PRKPVEHWHQLVEEKT 278 (296)
T ss_dssp -----SSCCEEEEECCCSSCTTCHHHHHHHHTSSSS-SSSCSCSCCCCBBCC-
T ss_pred -----CCCCceEEEEEECCccCCchhHHHHHHHHhC-CCCceeEeeeccCccc
Confidence 5677899999888 5555654 4667788888876644
No 73
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=80.70 E-value=0.91 Score=47.78 Aligned_cols=52 Identities=21% Similarity=0.211 Sum_probs=45.1
Q ss_pred CCCCCcceeec--CCcceEEecCcc--cc--ccccccccccccCcceeeeeeCCCCcccce
Q 002906 566 SSKEGHLFELL--GNRMINLFPGRK--LD--YEHKHCQKQRSEEDFVTAIEFSPADPYGKA 620 (867)
Q Consensus 566 ~s~dg~l~El~--~~~Pl~fi~Gr~--~~--fE~k~~~~~~~ge~FVT~V~~spe~pYGea 620 (867)
..++|+.|+.+ .++|+.|..|.+ ++ ||.. +.++..|+.+ .|.++|+.+||+.
T Consensus 78 ~~~~g~~fd~~~~~~~~~~~~lg~~~~~i~g~e~~-l~~m~~Ge~~--~~~i~~~~~yg~~ 135 (338)
T 2if4_A 78 TKNSQHKFEDTWHEQQPIELVLGKEKKELAGLAIG-VASMKSGERA--LVHVGWELAYGKE 135 (338)
T ss_dssp ETTTCCCCEEHHHHTCCEEEETTSCCGGGHHHHHH-HHHCCBTCEE--EEEECGGGSSCSS
T ss_pred EcCCCcEeecccCCCCCeEEEcCCCCcccHHHHHH-HhcCCCCCeE--EEEECHHHhcCCC
Confidence 34568999988 578999999986 34 9998 9999999999 9999999999976
No 74
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=78.81 E-value=0.76 Score=45.26 Aligned_cols=50 Identities=14% Similarity=0.305 Sum_probs=43.2
Q ss_pred CCCcceeec--CCcceEEecCcccc-ccccccccccccCcceeeeeeCCCCcccce
Q 002906 568 KEGHLFELL--GNRMINLFPGRKLD-YEHKHCQKQRSEEDFVTAIEFSPADPYGKA 620 (867)
Q Consensus 568 ~dg~l~El~--~~~Pl~fi~Gr~~~-fE~k~~~~~~~ge~FVT~V~~spe~pYGea 620 (867)
.+|.+|+.+ .+.|+.|..|.-+. |+.. +.++..|+.+ .|.++|+.+||++
T Consensus 68 ~dG~~fdss~~~g~p~~f~lg~vI~G~eea-L~gMk~Ge~~--~~~Ip~~laYG~~ 120 (167)
T 1jvw_A 68 RDGTVFDSSRERGKPTTFRPNEVIKGWTEA-LQLMREGDRW--RLFIPYDLAYGVT 120 (167)
T ss_dssp TTSCEEEEHHHHTSCEEECGGGSCHHHHHH-HTTCCTTCEE--EEEECGGGTTTTT
T ss_pred CCCCEEeeccccCCCEEEEeCchhHHHHHH-HcCCCCCCEE--EEEECchhhCCCC
Confidence 478999988 46899999974333 9999 9999999999 9999999999987
No 75
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=76.59 E-value=7.3 Score=43.21 Aligned_cols=107 Identities=11% Similarity=0.141 Sum_probs=69.4
Q ss_pred eEEEEEEEeeeccCCCccc-cCCCceEEEEeccCCCcccccccceeeeecccceeeEEEEeee--cceEEEEEEeeCCCc
Q 002906 331 KIVEVFVEIVAVKNLPEDH-KDKGDLFVFFSKSQPDIFFNAKQKLTILSKSGMKQVASFQCEA--TGELLFELVSHSTSK 407 (867)
Q Consensus 331 ~vvev~~~iv~~~n~p~~~-k~~~~~fvr~~~~q~d~~~~~~~~~~~~s~~~~k~~~~~qCE~--t~~l~lel~~~~~~~ 407 (867)
.+-.+.|.|+..+|||... ....+-||.+.-. ..+ + -+..+.=+.+|.|.....|.-.. ...|.|+|.-+..
T Consensus 385 ~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~-~~~-~-~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~-- 459 (510)
T 3jzy_A 385 GIGRLMVHVIEATELKACKPNGKSNPYCEISMG-SQS-Y-TTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQ-- 459 (510)
T ss_dssp -CEEEEEEEEEEESCCCCSTTSCCCEEEEEEET-TEE-E-ECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCS--
T ss_pred CCceEEEEeceeecCCCCCCCCCCCeEEEEEEC-Cee-c-cCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCC--
Confidence 3445777889999997642 2336789988732 111 1 11112223467787766776653 3568888876653
Q ss_pred ccccCCccccceeeeecccccCCC-CcceEeEEEeeccC
Q 002906 408 IPMTGASKTMGTASLSLQNFISPI-SKLAVEQWFDLVPR 445 (867)
Q Consensus 408 ~~~~k~sk~~g~~s~~~~dll~~~-~~Ls~e~w~~l~~~ 445 (867)
+.+...||.++++++++.... +.-.++.|+.|...
T Consensus 460 ---~~~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~ 495 (510)
T 3jzy_A 460 ---FSPDDFLGRTEIPVAKIRTEQESKGPMTRRLLLHEV 495 (510)
T ss_dssp ---SSSCCEEEEEEEEHHHHHHHHHHHCSCCEEEECBSS
T ss_pred ---CCCCCceEEEEEEHHHhccccCCCCceeeeecCCCC
Confidence 557789999999999998632 23347899998765
No 76
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=74.95 E-value=7.9 Score=46.52 Aligned_cols=103 Identities=16% Similarity=0.116 Sum_probs=67.8
Q ss_pred EEEEEEeeeccCCCc---c-ccCCCceEEEEeccC-CCcccccccceeeeecccceeeEEEEeee--cceEEEEEEeeCC
Q 002906 333 VEVFVEIVAVKNLPE---D-HKDKGDLFVFFSKSQ-PDIFFNAKQKLTILSKSGMKQVASFQCEA--TGELLFELVSHST 405 (867)
Q Consensus 333 vev~~~iv~~~n~p~---~-~k~~~~~fvr~~~~q-~d~~~~~~~~~~~~s~~~~k~~~~~qCE~--t~~l~lel~~~~~ 405 (867)
-.+.|.|++.+|||. . .....+-||.++-.. +....+ ++.+.=+.++.|.+...|.... ...|.|+|.-+..
T Consensus 18 g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~k-Tkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D~D~ 96 (749)
T 1cjy_A 18 HKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKR-TRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY 96 (749)
T ss_dssp EEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEE-CCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEECCS
T ss_pred cEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEe-cceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEECCC
Confidence 346666789999987 2 112367899988442 111111 1111113467787777777763 5688888887653
Q ss_pred CcccccCCccccceeeeecccccCCCCcceEeEEEeeccC
Q 002906 406 SKIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPR 445 (867)
Q Consensus 406 ~~~~~~k~sk~~g~~s~~~~dll~~~~~Ls~e~w~~l~~~ 445 (867)
+. ...||.+.|++++|... -..+.|++|.+.
T Consensus 97 -----~~-ddfIG~v~I~L~~L~~g---~~~~~w~~L~~~ 127 (749)
T 1cjy_A 97 -----VM-DETLGTATFTVSSMKVG---EKKEVPFIFNQV 127 (749)
T ss_dssp -----SS-CEEEEEECCBSTTSCTT---CCCCEEEEETTT
T ss_pred -----CC-CceeEEEEEEHHHcCCC---CceEEEEecCCC
Confidence 45 78999999999999643 356899999876
No 77
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A
Probab=74.46 E-value=1.6 Score=45.10 Aligned_cols=50 Identities=14% Similarity=0.235 Sum_probs=43.1
Q ss_pred CCcceeec--CCcceEEecCcccc-ccccccccccccCcceeeeeeCCCCccccee
Q 002906 569 EGHLFELL--GNRMINLFPGRKLD-YEHKHCQKQRSEEDFVTAIEFSPADPYGKAI 621 (867)
Q Consensus 569 dg~l~El~--~~~Pl~fi~Gr~~~-fE~k~~~~~~~ge~FVT~V~~spe~pYGea~ 621 (867)
||.+|+.+ .+.|+.|..|.-+. |+.. +.++..|+.+ .|.++|+.+||+..
T Consensus 152 dG~vfdss~~~g~p~~f~lg~vI~G~eea-L~gMk~Gek~--~v~IP~~laYG~~g 204 (224)
T 1q6h_A 152 DGKEFDNSYTRGEPLSFRLDGVIPGWTEG-LKNIKKGGKI--KLVIPPELAYGKAG 204 (224)
T ss_dssp TSCEEEEGGGGTSCEEEEGGGSCHHHHHH-GGGSCTTCEE--EEEECGGGTTTTTC
T ss_pred CCCEEeeccccCCCEEEEcCCcchhHHHH-HcCCCCCCEE--EEEECchhhcCcCC
Confidence 78899988 36899999974333 9999 9999999999 99999999999873
No 78
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*
Probab=73.67 E-value=1.4 Score=45.09 Aligned_cols=50 Identities=12% Similarity=0.215 Sum_probs=43.1
Q ss_pred CCcceeec--CCcceEEecCcccc-ccccccccccccCcceeeeeeCCCCccccee
Q 002906 569 EGHLFELL--GNRMINLFPGRKLD-YEHKHCQKQRSEEDFVTAIEFSPADPYGKAI 621 (867)
Q Consensus 569 dg~l~El~--~~~Pl~fi~Gr~~~-fE~k~~~~~~~ge~FVT~V~~spe~pYGea~ 621 (867)
||.+|+.+ .+.|+.|..|.-+. |+.. +.++..|+.+ .|.++|+.+||+..
T Consensus 137 dG~vfdss~~~g~p~~f~lg~vI~G~eea-L~gMk~Gek~--~v~IP~~laYG~~g 189 (213)
T 1fd9_A 137 DGTVFDSTEKTGKPATFQVSQVIPGWTEA-LQLMPAGSTW--EIYVPSGLAYGPRS 189 (213)
T ss_dssp TSCEEEEHHHHCSCEEEEGGGSCHHHHHH-HTTCCTTCEE--EEEECGGGTTTTCC
T ss_pred CCCEEeeccccCCCEEEEcCchhhHHHHH-HcCCCCCCEE--EEEECchhccCccC
Confidence 78999988 37899999974333 9999 9999999999 89999999999873
No 79
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=72.69 E-value=0.74 Score=49.90 Aligned_cols=49 Identities=14% Similarity=0.327 Sum_probs=0.0
Q ss_pred CCcceeec--CCcceEEecCcccc---ccccccccccccCcceeeeeeCCCCcccce
Q 002906 569 EGHLFELL--GNRMINLFPGRKLD---YEHKHCQKQRSEEDFVTAIEFSPADPYGKA 620 (867)
Q Consensus 569 dg~l~El~--~~~Pl~fi~Gr~~~---fE~k~~~~~~~ge~FVT~V~~spe~pYGea 620 (867)
+|.+|+.+ .++|+.|..|.+.. ||.. +.++..|+.+ .|.++|+.+||++
T Consensus 43 dG~~fdss~~~~~p~~~~lG~g~~i~g~e~~-l~gm~~Ge~~--~~~ip~~~aYG~~ 96 (356)
T 3jxv_A 43 DGKKFDSSRDRDDTFKFKLGQGQVIKGWDQG-IKTMKKGENA--LFTIPPELAYGES 96 (356)
T ss_dssp ---------------------------------------------------------
T ss_pred CCCEEEEcccCCCcEEEEeCCCccchHHHHH-HhcCCCCCEE--EEEEChHHhCCCC
Confidence 78899988 35899999998766 9999 9999999999 9999999999987
No 80
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=66.21 E-value=34 Score=40.06 Aligned_cols=123 Identities=13% Similarity=0.152 Sum_probs=75.5
Q ss_pred CCceEEEEEEEeeeccCCCccc---cCCCceEEEEeccC--CCcccccccce-eee-ecccceeeEEEEee-ec-ceEEE
Q 002906 328 PDLKIVEVFVEIVAVKNLPEDH---KDKGDLFVFFSKSQ--PDIFFNAKQKL-TIL-SKSGMKQVASFQCE-AT-GELLF 398 (867)
Q Consensus 328 ~~r~vvev~~~iv~~~n~p~~~---k~~~~~fvr~~~~q--~d~~~~~~~~~-~~~-s~~~~k~~~~~qCE-~t-~~l~l 398 (867)
+.+....+.|.|+..+|||... ....+-||.+.-.. .|... .+.++ .=. .+|-|...-.|... +. .-|.|
T Consensus 492 ~~~~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~-~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~ 570 (624)
T 1djx_A 492 PWWRPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGS-RQTAVITNNGFNPRWDMEFEFEVTVPDLALVRF 570 (624)
T ss_dssp TTCCCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEE-EECCCCTTCSSSCEEEEEEEEEESCGGGCEEEE
T ss_pred CCccceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcce-eecccccCCCCCCccCceEEEEEecCCCCEEEE
Confidence 4445566888899999998653 23467899887322 12211 11111 111 35667766666554 32 46778
Q ss_pred EEEeeCCCcccccCCccccceeeeecccccCCCCcceEeEEEeeccCCCCCCCCCeeEEEEEeec
Q 002906 399 ELVSHSTSKIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNVSSKPISLRIAVSFT 463 (867)
Q Consensus 399 el~~~~~~~~~~~k~sk~~g~~s~~~~dll~~~~~Ls~e~w~~l~~~~~~~~~~p~~lrv~~S~T 463 (867)
+|.-+.. +.+...||.+.|++.+|..- .+|++|....+..- ....|.|-++|+
T Consensus 571 ~V~D~D~-----~~~dd~iG~~~ipl~~L~~G------~r~v~L~d~~g~~~-~~~~L~v~i~~~ 623 (624)
T 1djx_A 571 MVEDYDS-----SSKNDFIGQSTIPWNSLKQG------YRHVHLLSKNGDQH-PSATLFVKISIQ 623 (624)
T ss_dssp EEEECCS-----SSCCEEEEEEEEEGGGBCCE------EEEEEEECTTSCEE-EEEEEEEEEEEE
T ss_pred EEEEcCC-----CCCCceeEEEEEEHHHcCCC------cEEEeCCCCCcCCC-CceEEEEEEEEE
Confidence 8776643 45678999999999998742 47999976655321 234566665554
No 81
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=64.51 E-value=77 Score=36.55 Aligned_cols=123 Identities=11% Similarity=0.016 Sum_probs=84.7
Q ss_pred EEEEEEEeeeccCCCccccCCCceEEEEeccCCCcccccccceeeeecccceeeEEEEe-e--ecceEEEEEEeeCCCcc
Q 002906 332 IVEVFVEIVAVKNLPEDHKDKGDLFVFFSKSQPDIFFNAKQKLTILSKSGMKQVASFQC-E--ATGELLFELVSHSTSKI 408 (867)
Q Consensus 332 vvev~~~iv~~~n~p~~~k~~~~~fvr~~~~q~d~~~~~~~~~~~~s~~~~k~~~~~qC-E--~t~~l~lel~~~~~~~~ 408 (867)
+-.+.|.+++.+||+.+.-...+-||.++-.. .+ ++ ++.+.=+.+|.|++...|.- + ....|.|||.-.-.
T Consensus 393 ~~~L~V~V~~A~~L~~D~~g~sDPYV~v~l~~-~~-~k-Tkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~--- 466 (540)
T 3nsj_A 393 LAHLVVSNFRAEHLWGDYTTATDAYLKVFFGG-QE-FR-TGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADY--- 466 (540)
T ss_dssp EEEEEEEEEEEESCCCSSCSCCCEEEEEEETT-EE-EE-CCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCS---
T ss_pred ccEEEEEEEEccCCCcccCCCcCeEEEEEECC-Ee-ee-eeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCC---
Confidence 55677788999999874223467899987432 11 11 11122234677887767763 2 46789999876653
Q ss_pred cccCCccccceeeeecccccCCCCcceEeEEEeeccCCCCCCCCCeeEEEEEeecCCCCCceEEEeec
Q 002906 409 PMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNVSSKPISLRIAVSFTIPTLAPHLLRMVR 476 (867)
Q Consensus 409 ~~~k~sk~~g~~s~~~~dll~~~~~Ls~e~w~~l~~~~~~~~~~p~~lrv~~S~TpPv~ApylL~~v~ 476 (867)
+.+..+||.+.++++ +. +++.|+.|... -+.+++.+.+-|=.+.++=+.-+|
T Consensus 467 --~~~dD~LG~~~~~L~----~g---~~~~~~~l~~G-------~l~~~~~~~c~p~l~g~~c~~y~~ 518 (540)
T 3nsj_A 467 --GWDDDLLGSCDRSPH----SG---FHEVTCELNHG-------RVKFSYHAKCLPHLTGGTCLEYAP 518 (540)
T ss_dssp --SSCCEEEEEEEECCC----SE---EEEEEEECSSS-------EEEEEEEEEECTTEESTTSCEECC
T ss_pred --CCCCCEEEEEEEEee----CC---cEEEEEEcCCe-------EEEEEEEEEECCCCCCChhhhcCC
Confidence 446679999999887 22 47889986532 388888999999999888888888
No 82
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=61.62 E-value=6.1 Score=44.18 Aligned_cols=56 Identities=20% Similarity=0.282 Sum_probs=47.0
Q ss_pred CCcceeecCCcceEEecCcccc---ccccccccccccCcceeeeeeCCCCcccce-----eEEEecc
Q 002906 569 EGHLFELLGNRMINLFPGRKLD---YEHKHCQKQRSEEDFVTAIEFSPADPYGKA-----IALLDLK 627 (867)
Q Consensus 569 dg~l~El~~~~Pl~fi~Gr~~~---fE~k~~~~~~~ge~FVT~V~~spe~pYGea-----~aLldL~ 627 (867)
||..|+.+.+.|+.|..|.+.. |+.. +.++..|+.+ .|.+++.++||.. ++++++.
T Consensus 173 dG~~fd~~~~~~~~~~lG~g~~ipgfee~-L~G~k~Ge~~--~v~v~~~~~yg~~~lag~~~~F~V~ 236 (432)
T 1w26_A 173 DGEEFEGGKASDFVLAMGQGRMIPGFEDG-IKGHKAGEEF--TIDVTFPEEYHAENLKGKAAKFAIN 236 (432)
T ss_dssp SSCBCSSCCCSSEEEETTSCCSCTTHHHH-SSSCCSSCEE--EEEEECCTTCSCTTTSSCEEEEEEE
T ss_pred CCeEccCCCccceEEEeCCCCcchHHHHH-hCCCCCCCEE--EEEECCchhhCCCCCCCceEEEEEE
Confidence 7888887777899999998876 9999 9999999999 8999999999965 5555544
No 83
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=60.51 E-value=4.6 Score=42.58 Aligned_cols=46 Identities=20% Similarity=0.331 Sum_probs=39.8
Q ss_pred CCcceeecCCcceEEecCccc----c--ccccccccccccCcceeeeeeCCCCcccce
Q 002906 569 EGHLFELLGNRMINLFPGRKL----D--YEHKHCQKQRSEEDFVTAIEFSPADPYGKA 620 (867)
Q Consensus 569 dg~l~El~~~~Pl~fi~Gr~~----~--fE~k~~~~~~~ge~FVT~V~~spe~pYGea 620 (867)
+|.+|+. +|+.|..|.+. . ||.. +.+++.|+.+ .|.++|+.+||++
T Consensus 199 dG~~fd~---~~~~f~lG~g~~~~~i~G~e~~-l~gmk~Ge~~--~v~ip~~~~yG~~ 250 (280)
T 1q1c_A 199 KDKLFDQ---RELRFEIGEGENLDLPYGLERA-IQRMEKGEHS--IVYLKPSYAFGSV 250 (280)
T ss_dssp TTEEEEE---EEEEEETTCGGGGTCCHHHHHH-HTTCCTTCEE--EEEECGGGTTTTT
T ss_pred CCEEEec---CCeEEEecCCcccccchhHHHH-HhCCCCCcEE--EEEEChhHcCCcC
Confidence 6777885 68999999875 3 9999 9999999999 8999999999964
No 84
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=55.82 E-value=7.8 Score=39.19 Aligned_cols=14 Identities=7% Similarity=0.176 Sum_probs=7.6
Q ss_pred EEEeccCccEEEcC
Q 002906 622 ALLDLKSGVIKVKE 635 (867)
Q Consensus 622 aLldL~ke~FeVde 635 (867)
.|.++..+.+.||-
T Consensus 108 ~V~~v~~~~V~vD~ 121 (196)
T 2kfw_A 108 EITAVEDDHVVVDG 121 (196)
T ss_dssp EBCCCCSSSEEECC
T ss_pred EEEEEcCCEEEEeC
Confidence 35555555555553
No 85
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=53.47 E-value=3.2 Score=46.87 Aligned_cols=99 Identities=14% Similarity=0.189 Sum_probs=10.1
Q ss_pred EEEEeeeccCCCccccCCCceEEEEeccCCCcccccccceee-e---ecccceeeEEEEeee-cceEEEEEEeeCCCccc
Q 002906 335 VFVEIVAVKNLPEDHKDKGDLFVFFSKSQPDIFFNAKQKLTI-L---SKSGMKQVASFQCEA-TGELLFELVSHSTSKIP 409 (867)
Q Consensus 335 v~~~iv~~~n~p~~~k~~~~~fvr~~~~q~d~~~~~~~~~~~-~---s~~~~k~~~~~qCE~-t~~l~lel~~~~~~~~~ 409 (867)
+.|.|++++|||... +-||.+.- |.-...+.++-- + .+|-|...-.|.+.+ ...|.|+|..+.+.. .
T Consensus 13 L~V~VieAk~L~~~d----dpYv~v~l---~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~~~~L~v~V~d~~d~~-~ 84 (483)
T 3bxj_A 13 LKLWIIEARELPPKK----RYYCELCL---DDMLYARTTSKPRSASGDTVFWGEHFEFNNLPAVRALRLHLYRDSDKK-R 84 (483)
T ss_dssp C----------------------------------------------------CCEECC---------------------
T ss_pred EEEEEEEcCCcCCCC----CCeEEEEE---CCeEEeeeeEEeCCCCCCCCccccEEEEecCCCccEEEEEEEecCCcc-c
Confidence 566788999998743 45776542 111011112111 2 467788777777654 567777776642210 0
Q ss_pred ccCCccccceeeeecccccCCCCcceEeEEEeecc
Q 002906 410 MTGASKTMGTASLSLQNFISPISKLAVEQWFDLVP 444 (867)
Q Consensus 410 ~~k~sk~~g~~s~~~~dll~~~~~Ls~e~w~~l~~ 444 (867)
.+.+...||.+.|++++|.... ..+.|++|..
T Consensus 85 ~~~~d~~lG~v~i~l~~l~~~~---~~~~W~~L~~ 116 (483)
T 3bxj_A 85 KKDKAGYVGLVTVPVATLAGRH---FTEQWYPVTL 116 (483)
T ss_dssp -------------------------CCEECC----
T ss_pred cCCCCceEEEEEEEHHHhcCCC---CCCeEEECCC
Confidence 1346678999999999998542 5799999944
No 86
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=40.24 E-value=79 Score=36.78 Aligned_cols=101 Identities=20% Similarity=0.271 Sum_probs=63.9
Q ss_pred EEEEeeeccCCCcc-ccCCCceEEEEeccCCCcccc---cccceeeeecccceeeEEEEee---ecceEEEEEEeeCCCc
Q 002906 335 VFVEIVAVKNLPED-HKDKGDLFVFFSKSQPDIFFN---AKQKLTILSKSGMKQVASFQCE---ATGELLFELVSHSTSK 407 (867)
Q Consensus 335 v~~~iv~~~n~p~~-~k~~~~~fvr~~~~q~d~~~~---~~~~~~~~s~~~~k~~~~~qCE---~t~~l~lel~~~~~~~ 407 (867)
+.|.++..+||+.. .....+-||.++-+ ++.-.. -++.+.-+.++.|.....|+-. ....|.+|+.....
T Consensus 174 L~V~v~~a~~L~~~d~~g~sDPyvkv~l~-p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d~-- 250 (674)
T 3pfq_A 174 LIVVVRDAKNLVPMDPNGLSDPYVKLKLI-PDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL-- 250 (674)
T ss_dssp EEEEEEEEESCCCCSTTSSCCEEEEEEEE-SCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECCS--
T ss_pred eeeeeecccccCCCCcccccCcccccccc-cCccccccccccccccccCCCccceeeeecccCCccceeeeEEeeccc--
Confidence 44566788888754 22346789988743 221111 1111222345667666566554 23568888877653
Q ss_pred ccccCCccccceeeeecccccCCCCcceEeEEEeeccC
Q 002906 408 IPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPR 445 (867)
Q Consensus 408 ~~~~k~sk~~g~~s~~~~dll~~~~~Ls~e~w~~l~~~ 445 (867)
+.+...||.++|+++++.... ++.|+.|...
T Consensus 251 ---~~~dd~iG~~~i~l~~l~~~~----~~~w~~Lls~ 281 (674)
T 3pfq_A 251 ---TSRNDFMGSLSFGISELQKAG----VDGWFKLLSQ 281 (674)
T ss_dssp ---SSCCEECCBCCCBTTHHHHCC----EEEEEECBCT
T ss_pred ---ccccccccccccchhhhccCC----cccceeeccc
Confidence 557789999999999999753 5899999655
No 87
>2hm3_A Nematocyst outer WALL antigen; disulfide, evolution, cysteine rich, structural protein; NMR {Hydra vulgaris} PDB: 2hm4_A 2hm5_A 2hm6_A
Probab=39.60 E-value=3.2 Score=29.90 Aligned_cols=14 Identities=50% Similarity=1.360 Sum_probs=7.0
Q ss_pred CCCCCCCCCCCCCC
Q 002906 753 GCGGGCGGGCGGGC 766 (867)
Q Consensus 753 ~~~~~~~~gc~~~~ 766 (867)
||++-|-+-|.+||
T Consensus 11 gcsgdcypeckpgc 24 (31)
T 2hm3_A 11 GCSGDCYPECKPGC 24 (31)
T ss_dssp TCCGGGTTTTCHHH
T ss_pred CcCccccCccCCCc
Confidence 44454555555554
No 88
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=36.66 E-value=21 Score=37.20 Aligned_cols=46 Identities=17% Similarity=0.302 Sum_probs=39.8
Q ss_pred CCcceeecCCcceEEecCcccc------ccccccccccccCcceeeeeeCCCCcccce
Q 002906 569 EGHLFELLGNRMINLFPGRKLD------YEHKHCQKQRSEEDFVTAIEFSPADPYGKA 620 (867)
Q Consensus 569 dg~l~El~~~~Pl~fi~Gr~~~------fE~k~~~~~~~ge~FVT~V~~spe~pYGea 620 (867)
+|.+|+.+ |+.|+.|.+.. ||.. +.....|+.. .|.+.|+.+||..
T Consensus 56 ~g~~fd~~---~~~f~lG~g~~~~~~~~~e~a-l~~~~~Ge~~--~l~i~p~~ayg~~ 107 (336)
T 1p5q_A 56 KDKLFDQR---ELRFEIGEGENLDLPYGLERA-IQRMEKGEHS--IVYLKPSYAFGSV 107 (336)
T ss_dssp TTEEEEEE---EEEEETTCGGGGTCCHHHHHH-HTTCCTTCEE--EEEECTTTTTTTT
T ss_pred CCEEEecC---CeEEEeCCCCccccchHHHHH-HhcCCCCCeE--EEEECCccccCcC
Confidence 67888874 99999997752 8888 8889999988 9999999999987
No 89
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=31.68 E-value=37 Score=37.41 Aligned_cols=58 Identities=19% Similarity=0.176 Sum_probs=42.3
Q ss_pred CCCcceeecCCcceEEecCcccc---ccccccccccccCcceeeeeeCCCCcccce-----eEEEeccC
Q 002906 568 KEGHLFELLGNRMINLFPGRKLD---YEHKHCQKQRSEEDFVTAIEFSPADPYGKA-----IALLDLKS 628 (867)
Q Consensus 568 ~dg~l~El~~~~Pl~fi~Gr~~~---fE~k~~~~~~~ge~FVT~V~~spe~pYGea-----~aLldL~k 628 (867)
.||..|+.+.+.|+.|..|.+.. |+.. +.+++.|+.+ .|.++....||.. ++.+++..
T Consensus 175 ~dG~~fd~~~~~~~~~~lG~g~~ipgfee~-L~Gmk~Ge~~--~v~v~fp~dy~~~~laGk~~~F~V~v 240 (392)
T 1t11_A 175 IDGVEFEGGKAENFPLEMGAGRMIPGFEDG-IVGKTKGMEF--VIDVTFPEDYHAENLKGKAAKFAIKV 240 (392)
T ss_dssp SSSSCCTTCEEEEEEEETTSCCBSTTSGGG-TTTCCSSCCC--CEEEECCTTCSCTTTSSCEEEECCCE
T ss_pred ECCEEccCCCccceEEEecCCCcchhHHHH-hCCCCCCCEE--EEEEeCccccccCCCCCCeEEEEEEE
Confidence 37888887767899999998877 9999 9999999998 5555422336653 55555543
No 90
>2pk2_A Cyclin-T1, protein TAT; TAR, twinning, transcription regulation P- TEFB, cell cycle; 2.67A {Homo sapiens} SCOP: a.74.1.1 a.74.1.1 PDB: 2w2h_C
Probab=21.17 E-value=20 Score=39.06 Aligned_cols=46 Identities=26% Similarity=0.432 Sum_probs=0.0
Q ss_pred ccccccccccCCCCCCCCCCCCCCCCccccCCCCCCCCCCCCCCCccccCCC
Q 002906 700 NKNMTNEVNSGGCGGCGSGCGGGRVASVKSSGCGGCGGGGGGCGNMVNGGGC 751 (867)
Q Consensus 700 ~~~~~~~~~~~~~~g~~~~c~~~c~~~~~~g~cgg~~~c~~gcg~~~~~~~c 751 (867)
+.+..+..++.++||-|++ +...+||.||.||.||+||......++
T Consensus 269 ~~~~~~~~s~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (358)
T 2pk2_A 269 ADDRGTDEKTSEQGGTGGG------SGGGSGGGSGGGTSGGVPGQNTGGQEA 314 (358)
T ss_dssp ----------------------------------------------------
T ss_pred ccCccccccccccCCCCCC------CCCCCCCCCCCCCCCCCCCccCCCCCC
Done!