Query 002909
Match_columns 867
No_of_seqs 534 out of 3604
Neff 7.0
Searched_HMMs 46136
Date Thu Mar 28 13:14:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002909.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002909hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00142 sucrose synthase 100.0 9E-195 2E-199 1710.7 73.1 813 1-814 1-813 (815)
2 TIGR02470 sucr_synth sucrose s 100.0 3E-187 6E-192 1647.7 75.0 783 25-808 1-784 (784)
3 PF00862 Sucrose_synth: Sucros 100.0 2E-169 4E-174 1388.8 33.3 550 8-558 1-550 (550)
4 TIGR02468 sucrsPsyn_pln sucros 100.0 9.5E-57 2.1E-61 542.5 41.7 449 279-770 168-669 (1050)
5 KOG0853 Glycosyltransferase [C 100.0 3.1E-56 6.8E-61 500.1 26.3 485 197-799 1-495 (495)
6 TIGR02472 sucr_P_syn_N sucrose 100.0 4.6E-50 9.9E-55 462.5 41.9 426 281-769 1-438 (439)
7 PRK00654 glgA glycogen synthas 100.0 2.6E-43 5.7E-48 409.3 37.5 426 281-770 1-461 (466)
8 TIGR03449 mycothiol_MshA UDP-N 100.0 1.4E-42 3E-47 394.9 39.9 398 283-770 1-400 (405)
9 PLN02939 transferase, transfer 100.0 4.1E-42 8.8E-47 410.0 42.9 458 258-770 455-965 (977)
10 TIGR02095 glgA glycogen/starch 100.0 1E-41 2.2E-46 396.7 40.3 433 281-770 1-471 (473)
11 cd03800 GT1_Sucrose_synthase T 100.0 8E-41 1.7E-45 376.6 39.8 397 282-766 1-397 (398)
12 PLN02316 synthase/transferase 100.0 8.1E-41 1.8E-45 405.8 41.5 404 280-770 587-1032(1036)
13 PRK14098 glycogen synthase; Pr 100.0 8.7E-41 1.9E-45 389.1 39.8 438 278-770 4-484 (489)
14 cd03796 GT1_PIG-A_like This fa 100.0 5.3E-40 1.1E-44 373.9 38.5 363 282-769 1-365 (398)
15 PRK10307 putative glycosyl tra 100.0 7.5E-40 1.6E-44 374.0 39.0 395 281-770 1-406 (412)
16 PRK14099 glycogen synthase; Pr 100.0 9.4E-40 2E-44 380.1 38.7 435 280-770 3-477 (485)
17 cd03791 GT1_Glycogen_synthase_ 100.0 1.5E-39 3.3E-44 378.3 39.5 433 282-770 1-475 (476)
18 TIGR02149 glgA_Coryne glycogen 100.0 7.8E-39 1.7E-43 360.9 38.5 377 281-770 1-385 (388)
19 PRK15427 colanic acid biosynth 100.0 7.6E-39 1.7E-43 365.5 38.5 280 407-770 116-404 (406)
20 cd04962 GT1_like_5 This family 100.0 3.2E-38 6.8E-43 352.9 39.4 365 281-770 1-369 (371)
21 PLN02871 UDP-sulfoquinovose:DA 100.0 1.7E-38 3.7E-43 369.0 38.4 379 278-776 56-440 (465)
22 PRK15484 lipopolysaccharide 1, 100.0 1.1E-37 2.3E-42 353.2 38.3 373 279-770 1-376 (380)
23 cd03818 GT1_ExpC_like This fam 100.0 5E-37 1.1E-41 349.1 39.1 367 320-766 15-395 (396)
24 cd03805 GT1_ALG2_like This fam 100.0 2.3E-37 5E-42 349.4 35.5 386 281-765 1-392 (392)
25 TIGR03088 stp2 sugar transfera 100.0 4E-37 8.6E-42 346.1 35.9 364 282-770 3-371 (374)
26 cd04955 GT1_like_6 This family 100.0 1.4E-35 3E-40 329.4 39.8 361 282-770 1-363 (363)
27 PRK15179 Vi polysaccharide bio 100.0 2.4E-36 5.2E-41 360.4 35.7 457 205-770 204-692 (694)
28 cd05844 GT1_like_7 Glycosyltra 100.0 4.5E-36 9.7E-41 335.0 34.3 280 408-767 81-366 (367)
29 cd03821 GT1_Bme6_like This fam 100.0 4.6E-35 9.9E-40 322.2 37.3 372 282-766 1-374 (375)
30 KOG1111 N-acetylglucosaminyltr 100.0 3.4E-36 7.4E-41 319.0 26.8 362 281-769 1-364 (426)
31 cd03819 GT1_WavL_like This fam 100.0 1.8E-35 4E-40 327.9 33.0 347 302-761 8-355 (355)
32 cd03792 GT1_Trehalose_phosphor 100.0 3.7E-35 8.1E-40 330.7 34.2 286 407-770 83-370 (372)
33 PRK15490 Vi polysaccharide bio 100.0 1.6E-35 3.5E-40 339.0 31.5 395 302-770 172-574 (578)
34 cd03802 GT1_AviGT4_like This f 100.0 5.3E-34 1.1E-38 313.6 37.6 333 281-770 1-335 (335)
35 cd04951 GT1_WbdM_like This fam 100.0 1.8E-33 3.9E-38 311.8 37.3 281 408-770 78-359 (360)
36 cd03807 GT1_WbnK_like This fam 100.0 7.6E-34 1.6E-38 311.3 33.6 363 282-770 1-365 (365)
37 cd03799 GT1_amsK_like This is 100.0 1.7E-33 3.6E-38 311.4 36.5 271 408-765 78-355 (355)
38 cd03795 GT1_like_4 This family 100.0 2.3E-33 4.9E-38 310.6 36.8 354 282-762 1-357 (357)
39 cd03813 GT1_like_3 This family 100.0 1.5E-34 3.3E-39 336.8 28.1 290 408-770 172-475 (475)
40 cd03794 GT1_wbuB_like This fam 100.0 2.4E-33 5.1E-38 309.6 36.2 387 282-766 1-394 (394)
41 cd03801 GT1_YqgM_like This fam 100.0 6.5E-33 1.4E-37 302.2 38.9 373 282-769 1-373 (374)
42 cd03817 GT1_UGDG_like This fam 100.0 5.7E-33 1.2E-37 305.9 37.9 369 282-769 1-371 (374)
43 cd03814 GT1_like_2 This family 100.0 3.9E-33 8.4E-38 307.5 36.4 362 282-769 1-363 (364)
44 cd03812 GT1_CapH_like This fam 100.0 1.6E-33 3.6E-38 312.6 32.8 346 282-753 1-347 (358)
45 PRK09922 UDP-D-galactose:(gluc 100.0 8.3E-34 1.8E-38 318.6 30.6 267 408-770 83-354 (359)
46 cd03822 GT1_ecORF704_like This 100.0 1.7E-32 3.7E-37 303.0 39.5 357 282-769 1-365 (366)
47 cd03806 GT1_ALG11_like This fa 100.0 3.2E-33 7E-38 320.5 33.6 382 283-763 3-418 (419)
48 cd03825 GT1_wcfI_like This fam 100.0 4.7E-33 1E-37 309.0 33.8 343 281-770 1-363 (365)
49 PLN02846 digalactosyldiacylgly 100.0 6.2E-33 1.4E-37 316.8 35.4 369 279-772 3-392 (462)
50 cd03820 GT1_amsD_like This fam 100.0 2.3E-32 4.9E-37 297.1 36.0 345 282-766 1-347 (348)
51 PLN02949 transferase, transfer 100.0 1.9E-32 4E-37 316.5 36.3 399 273-770 26-455 (463)
52 PRK10125 putative glycosyl tra 100.0 1.3E-32 2.8E-37 313.8 34.5 277 407-770 92-403 (405)
53 cd03816 GT1_ALG1_like This fam 100.0 2.9E-32 6.3E-37 312.4 36.5 391 278-766 1-411 (415)
54 cd03809 GT1_mtfB_like This fam 100.0 1.4E-32 3.1E-37 303.6 30.5 364 282-766 1-364 (365)
55 cd03823 GT1_ExpE7_like This fa 100.0 9.3E-32 2E-36 295.5 35.7 353 282-770 1-358 (359)
56 cd03808 GT1_cap1E_like This fa 100.0 1.7E-31 3.7E-36 291.5 37.5 356 282-766 1-358 (359)
57 cd03798 GT1_wlbH_like This fam 100.0 4E-31 8.6E-36 289.6 38.3 284 407-770 91-375 (377)
58 cd03811 GT1_WabH_like This fam 100.0 2E-31 4.4E-36 289.7 32.9 272 408-757 80-352 (353)
59 TIGR03087 stp1 sugar transfera 100.0 3.8E-32 8.3E-37 309.3 27.6 283 408-770 103-395 (397)
60 COG0297 GlgA Glycogen synthase 100.0 6.3E-31 1.4E-35 300.6 32.6 436 281-771 1-477 (487)
61 cd04946 GT1_AmsK_like This fam 100.0 5.7E-30 1.2E-34 292.7 37.0 276 407-766 125-406 (407)
62 TIGR02918 accessory Sec system 100.0 8.4E-31 1.8E-35 305.4 29.7 279 407-770 209-498 (500)
63 PLN02275 transferase, transfer 100.0 2.3E-29 4.9E-34 284.3 30.8 327 302-730 14-370 (371)
64 PLN02501 digalactosyldiacylgly 100.0 4.1E-29 8.8E-34 288.6 30.5 273 408-771 433-709 (794)
65 cd03804 GT1_wbaZ_like This fam 100.0 1.3E-29 2.8E-34 282.7 25.3 264 407-765 81-350 (351)
66 cd04949 GT1_gtfA_like This fam 100.0 3.7E-29 8E-34 281.0 28.1 273 408-765 98-372 (372)
67 PHA01630 putative group 1 glyc 100.0 3.6E-28 7.9E-33 269.9 26.7 258 415-772 52-331 (331)
68 cd03793 GT1_Glycogen_synthase_ 100.0 3.6E-27 7.8E-32 270.7 30.7 331 407-770 146-585 (590)
69 PHA01633 putative glycosyl tra 99.9 1.3E-25 2.8E-30 247.9 29.4 224 473-766 89-334 (335)
70 PRK00726 murG undecaprenyldiph 99.9 1.8E-25 4E-30 250.5 31.2 342 281-769 2-355 (357)
71 cd03788 GT1_TPS Trehalose-6-Ph 99.9 5.3E-26 1.1E-30 263.6 21.2 322 397-767 120-457 (460)
72 cd03785 GT1_MurG MurG is an N- 99.9 1.9E-24 4.2E-29 240.8 31.2 322 303-762 9-348 (350)
73 TIGR01133 murG undecaprenyldip 99.9 2.2E-24 4.8E-29 240.1 29.9 314 320-762 19-345 (348)
74 TIGR02400 trehalose_OtsA alpha 99.9 3.8E-24 8.2E-29 246.9 24.5 319 397-767 116-452 (456)
75 PRK05749 3-deoxy-D-manno-octul 99.9 5.9E-23 1.3E-27 236.1 29.2 283 408-768 123-416 (425)
76 PRK13609 diacylglycerol glucos 99.9 5.2E-23 1.1E-27 232.9 26.8 261 408-769 103-369 (380)
77 PF00534 Glycos_transf_1: Glyc 99.9 7.2E-23 1.6E-27 204.9 14.4 160 571-751 12-172 (172)
78 PLN03063 alpha,alpha-trehalose 99.9 3.3E-22 7.1E-27 244.1 22.4 323 396-770 135-476 (797)
79 cd04950 GT1_like_1 Glycosyltra 99.9 1.8E-20 3.8E-25 212.1 31.5 265 406-768 99-368 (373)
80 TIGR02094 more_P_ylases alpha- 99.9 1.5E-20 3.1E-25 222.3 28.6 343 403-769 155-598 (601)
81 PLN02605 monogalactosyldiacylg 99.9 3.3E-20 7.1E-25 210.6 27.7 262 408-768 99-378 (382)
82 PRK14501 putative bifunctional 99.9 4E-21 8.7E-26 234.5 21.3 323 397-770 122-461 (726)
83 cd01635 Glycosyltransferase_GT 99.9 1.1E-19 2.4E-24 186.8 26.0 121 579-715 109-229 (229)
84 PRK13608 diacylglycerol glucos 99.8 1.2E-19 2.6E-24 206.6 24.7 261 408-769 103-369 (391)
85 COG0438 RfaG Glycosyltransfera 99.8 1.2E-18 2.6E-23 187.2 26.8 289 410-770 84-375 (381)
86 KOG1387 Glycosyltransferase [C 99.8 2.6E-18 5.7E-23 182.0 26.9 386 275-767 37-454 (465)
87 TIGR02398 gluc_glyc_Psyn gluco 99.8 4.4E-18 9.6E-23 196.0 25.8 323 398-767 122-478 (487)
88 TIGR00236 wecB UDP-N-acetylglu 99.8 9.1E-18 2E-22 189.2 21.7 283 396-767 76-363 (365)
89 PRK00025 lpxB lipid-A-disaccha 99.8 2.8E-17 6E-22 185.9 25.0 249 408-752 84-356 (380)
90 PRK09814 beta-1,6-galactofuran 99.8 8.3E-17 1.8E-21 179.4 24.8 243 409-762 63-322 (333)
91 cd04299 GT1_Glycogen_Phosphory 99.7 1.3E-16 2.9E-21 191.9 26.2 341 403-768 242-686 (778)
92 cd03786 GT1_UDP-GlcNAc_2-Epime 99.7 1E-16 2.2E-21 179.8 22.2 252 408-745 87-345 (363)
93 PLN03064 alpha,alpha-trehalose 99.7 2.1E-16 4.6E-21 192.6 22.6 318 397-767 220-557 (934)
94 TIGR03713 acc_sec_asp1 accesso 99.7 1.4E-14 2.9E-19 169.8 25.2 168 575-768 320-518 (519)
95 PF05693 Glycogen_syn: Glycoge 99.6 1.2E-14 2.7E-19 166.7 18.7 329 410-769 144-579 (633)
96 TIGR00215 lpxB lipid-A-disacch 99.6 1.6E-13 3.4E-18 156.1 24.5 249 408-750 88-364 (385)
97 PF13692 Glyco_trans_1_4: Glyc 99.6 8.5E-15 1.8E-19 140.6 9.7 130 574-731 2-133 (135)
98 KOG2941 Beta-1,4-mannosyltrans 99.5 1.4E-11 3.1E-16 131.6 31.9 377 322-766 33-436 (444)
99 PF00982 Glyco_transf_20: Glyc 99.4 1.4E-11 3.1E-16 142.6 18.7 322 397-767 130-470 (474)
100 PRK10117 trehalose-6-phosphate 99.3 8E-11 1.7E-15 135.1 21.9 322 398-767 113-449 (474)
101 PF13524 Glyco_trans_1_2: Glyc 99.3 6.4E-12 1.4E-16 113.2 10.2 92 670-767 1-92 (92)
102 PRK12446 undecaprenyldiphospho 99.3 1.2E-09 2.6E-14 122.9 30.2 303 303-741 11-329 (352)
103 PF13439 Glyco_transf_4: Glyco 99.3 2.7E-11 5.9E-16 119.9 11.9 167 302-535 10-176 (177)
104 PF13579 Glyco_trans_4_4: Glyc 99.3 1.1E-11 2.4E-16 120.6 8.6 160 304-529 1-160 (160)
105 COG0707 MurG UDP-N-acetylgluco 99.2 1.1E-08 2.3E-13 114.9 32.2 239 408-752 90-339 (357)
106 PLN02205 alpha,alpha-trehalose 99.2 6.4E-10 1.4E-14 137.0 23.0 325 396-767 188-547 (854)
107 COG0380 OtsA Trehalose-6-phosp 99.2 1.8E-09 3.9E-14 123.6 23.8 315 410-767 148-475 (486)
108 TIGR02919 accessory Sec system 99.1 4.6E-09 1E-13 120.9 23.4 135 590-752 291-426 (438)
109 PF09314 DUF1972: Domain of un 99.0 1E-08 2.3E-13 104.0 14.9 177 280-531 1-185 (185)
110 cd03784 GT1_Gtf_like This fami 98.9 2.3E-07 5.1E-12 105.9 26.5 124 571-731 237-370 (401)
111 PF08323 Glyco_transf_5: Starc 98.9 4.8E-09 1E-13 112.2 11.4 185 282-492 1-231 (245)
112 TIGR03492 conserved hypothetic 98.8 1.2E-06 2.6E-11 100.3 28.0 166 573-767 204-394 (396)
113 TIGR01426 MGT glycosyltransfer 98.8 2.6E-06 5.6E-11 97.2 30.5 111 641-768 273-389 (392)
114 PF13528 Glyco_trans_1_3: Glyc 98.8 4.9E-07 1.1E-11 99.8 21.3 116 572-728 191-315 (318)
115 TIGR03568 NeuC_NnaA UDP-N-acet 98.6 4.3E-06 9.3E-11 94.8 23.7 273 396-767 83-363 (365)
116 PF13477 Glyco_trans_4_2: Glyc 98.6 5.6E-07 1.2E-11 86.9 13.8 123 320-484 15-139 (139)
117 COG1519 KdtA 3-deoxy-D-manno-o 98.6 2.2E-05 4.9E-10 87.9 27.2 264 408-755 122-404 (419)
118 KOG3742 Glycogen synthase [Car 98.6 6.1E-07 1.3E-11 98.9 12.9 104 655-767 492-608 (692)
119 TIGR00661 MJ1255 conserved hyp 98.4 4.1E-05 8.8E-10 85.2 21.6 77 642-729 228-310 (321)
120 PHA03392 egt ecdysteroid UDP-g 98.3 0.00036 7.8E-09 82.5 29.9 137 574-749 297-444 (507)
121 TIGR03590 PseG pseudaminic aci 98.3 5.1E-05 1.1E-09 82.9 21.2 97 574-699 171-268 (279)
122 PF13844 Glyco_transf_41: Glyc 98.3 1.6E-05 3.4E-10 91.6 17.4 183 561-770 274-465 (468)
123 PF04007 DUF354: Protein of un 98.3 0.00014 3.1E-09 81.1 22.9 62 662-731 244-308 (335)
124 PF02350 Epimerase_2: UDP-N-ac 98.2 6.2E-05 1.3E-09 84.8 19.9 276 397-768 58-344 (346)
125 PF02684 LpxB: Lipid-A-disacch 98.1 0.00035 7.6E-09 79.0 21.6 144 571-743 181-346 (373)
126 PLN02448 UDP-glycosyltransfera 97.9 0.0057 1.2E-07 71.7 28.2 138 573-749 274-428 (459)
127 COG1819 Glycosyl transferases, 97.9 0.0011 2.4E-08 76.3 21.9 155 572-767 236-397 (406)
128 COG4641 Uncharacterized protei 97.7 0.0033 7.2E-08 69.8 20.0 116 643-768 237-358 (373)
129 COG3914 Spy Predicted O-linked 97.7 0.00063 1.4E-08 78.6 14.6 180 564-770 422-612 (620)
130 COG0763 LpxB Lipid A disacchar 97.6 0.0027 5.9E-08 70.8 18.7 201 407-699 83-291 (381)
131 PRK10017 colanic acid biosynth 97.5 0.12 2.5E-06 60.0 29.7 96 633-743 297-398 (426)
132 cd04300 GT1_Glycogen_Phosphory 97.4 0.0027 5.9E-08 77.5 16.3 143 565-716 521-681 (797)
133 PF12000 Glyco_trans_4_3: Gkyc 97.4 0.0014 3.1E-08 66.0 11.4 110 398-535 56-170 (171)
134 PRK01021 lpxB lipid-A-disaccha 97.4 0.014 3E-07 69.4 21.1 244 407-749 308-583 (608)
135 COG0381 WecB UDP-N-acetylgluco 97.4 0.033 7.1E-07 62.6 22.7 274 408-770 91-369 (383)
136 PRK02797 4-alpha-L-fucosyltran 97.3 0.042 9E-07 60.1 21.5 167 575-770 146-315 (322)
137 COG0058 GlgP Glucan phosphoryl 97.1 0.0093 2E-07 72.0 15.7 144 565-717 478-630 (750)
138 PLN02208 glycosyltransferase f 97.0 0.58 1.3E-05 54.6 29.6 91 643-750 311-415 (442)
139 PLN02554 UDP-glycosyltransfera 96.8 1.4 3.1E-05 52.0 31.1 88 643-743 342-447 (481)
140 PRK14985 maltodextrin phosphor 96.8 0.0077 1.7E-07 73.3 11.4 143 565-716 520-680 (798)
141 TIGR02093 P_ylase glycogen/sta 96.7 0.0092 2E-07 72.7 11.7 143 565-716 518-678 (794)
142 COG4671 Predicted glycosyl tra 96.7 0.098 2.1E-06 57.8 17.9 137 571-731 217-363 (400)
143 PF07429 Glyco_transf_56: 4-al 96.7 0.15 3.2E-06 56.6 19.3 122 574-709 184-307 (360)
144 PLN02562 UDP-glycosyltransfera 96.6 2.1 4.6E-05 50.1 29.9 88 642-743 327-419 (448)
145 PLN02210 UDP-glucosyl transfer 96.6 2.4 5.1E-05 49.8 32.1 77 643-731 324-413 (456)
146 PRK14986 glycogen phosphorylas 96.5 0.016 3.4E-07 71.0 11.5 151 565-725 534-702 (815)
147 PLN02173 UDP-glucosyl transfer 96.5 2.8 6E-05 49.2 32.5 78 642-731 316-406 (449)
148 KOG1050 Trehalose-6-phosphate 96.4 0.12 2.5E-06 63.4 18.4 152 572-732 274-439 (732)
149 COG1817 Uncharacterized protei 96.4 0.54 1.2E-05 51.4 20.9 112 584-731 198-312 (346)
150 PF08288 PIGA: PIGA (GPI ancho 96.3 0.017 3.7E-07 51.2 7.9 73 360-443 12-86 (90)
151 PF06258 Mito_fiss_Elm1: Mitoc 96.2 0.28 6.2E-06 54.5 18.6 109 572-701 145-259 (311)
152 PLN02410 UDP-glucoronosyl/UDP- 96.0 4.4 9.5E-05 47.5 30.1 92 642-748 323-420 (451)
153 PF00343 Phosphorylase: Carboh 96.0 0.24 5.3E-06 60.0 18.0 143 565-716 435-595 (713)
154 PRK14089 ipid-A-disaccharide s 96.0 0.1 2.2E-06 58.9 13.8 91 575-698 169-261 (347)
155 PLN03007 UDP-glucosyltransfera 95.8 5.7 0.00012 47.0 35.6 78 642-731 344-438 (482)
156 PF11440 AGT: DNA alpha-glucos 95.7 0.95 2.1E-05 48.7 18.4 139 578-731 187-351 (355)
157 PLN02863 UDP-glucoronosyl/UDP- 95.4 7.7 0.00017 45.8 33.6 79 643-731 343-431 (477)
158 PF04101 Glyco_tran_28_C: Glyc 95.4 0.00062 1.4E-08 68.1 -6.1 91 643-748 55-155 (167)
159 PLN00414 glycosyltransferase f 95.2 8.9 0.00019 44.9 31.8 92 645-750 314-416 (446)
160 COG3660 Predicted nucleoside-d 95.0 3.3 7.2E-05 44.4 19.9 111 571-701 159-275 (329)
161 COG3980 spsG Spore coat polysa 94.8 1.6 3.4E-05 47.3 16.9 140 573-749 158-305 (318)
162 PLN02670 transferase, transfer 94.7 12 0.00026 44.2 32.5 50 682-731 368-427 (472)
163 COG2327 WcaK Polysaccharide py 94.1 13 0.00029 42.4 27.9 96 635-743 258-357 (385)
164 PF04464 Glyphos_transf: CDP-G 94.1 0.36 7.8E-06 54.7 11.4 133 564-731 184-334 (369)
165 PF11997 DUF3492: Domain of un 91.5 2.6 5.7E-05 45.9 12.9 80 408-487 171-256 (268)
166 cd03789 GT1_LPS_heptosyltransf 90.5 1.6 3.4E-05 47.4 10.2 99 576-698 124-224 (279)
167 PF05159 Capsule_synth: Capsul 90.4 11 0.00024 40.7 16.7 105 571-698 114-225 (269)
168 PF00201 UDPGT: UDP-glucoronos 90.4 0.98 2.1E-05 53.3 9.2 134 573-744 276-416 (500)
169 PLN03004 UDP-glycosyltransfera 88.9 4.4 9.6E-05 47.5 12.8 84 643-742 334-429 (451)
170 PF01075 Glyco_transf_9: Glyco 88.5 2.5 5.4E-05 44.8 9.7 103 572-697 104-208 (247)
171 PRK10422 lipopolysaccharide co 88.3 3.5 7.6E-05 46.5 11.2 103 573-697 183-287 (352)
172 PLN02992 coniferyl-alcohol glu 87.8 66 0.0014 38.2 31.5 77 643-731 338-425 (481)
173 TIGR02195 heptsyl_trn_II lipop 87.2 4.5 9.7E-05 45.1 11.2 102 571-697 171-276 (334)
174 TIGR02201 heptsyl_trn_III lipo 84.1 7.1 0.00015 43.7 10.8 102 574-697 182-285 (344)
175 PLN02152 indole-3-acetate beta 83.8 12 0.00025 44.1 12.7 140 573-731 261-415 (455)
176 TIGR02193 heptsyl_trn_I lipopo 83.4 8.3 0.00018 42.6 10.9 99 573-697 179-279 (319)
177 TIGR03609 S_layer_CsaB polysac 82.8 57 0.0012 35.7 17.1 86 589-697 190-275 (298)
178 PF03401 TctC: Tripartite tric 82.1 21 0.00046 38.9 13.2 150 574-750 78-245 (274)
179 PF06925 MGDG_synth: Monogalac 80.3 6.6 0.00014 39.4 7.9 59 408-490 88-151 (169)
180 PF12038 DUF3524: Domain of un 79.5 7 0.00015 39.3 7.5 76 408-491 58-134 (168)
181 COG0859 RfaF ADP-heptose:LPS h 78.9 13 0.00028 41.7 10.5 99 574-698 176-277 (334)
182 PF08660 Alg14: Oligosaccharid 77.4 16 0.00035 37.0 9.6 63 408-489 91-159 (170)
183 PF10087 DUF2325: Uncharacteri 77.3 5.9 0.00013 36.0 5.9 83 608-705 2-89 (97)
184 PLN02167 UDP-glycosyltransfera 77.3 82 0.0018 37.2 17.0 79 643-731 340-432 (475)
185 PRK10964 ADP-heptose:LPS hepto 76.7 17 0.00037 40.2 10.7 97 575-697 180-278 (322)
186 PLN00164 glucosyltransferase; 76.2 33 0.00072 40.6 13.3 65 682-750 368-445 (480)
187 PLN02555 limonoid glucosyltran 76.0 44 0.00095 39.6 14.1 94 642-750 336-441 (480)
188 PF10933 DUF2827: Protein of u 74.6 36 0.00077 38.5 12.0 162 565-752 180-345 (364)
189 PRK10916 ADP-heptose:LPS hepto 73.8 21 0.00045 40.1 10.5 99 575-697 182-286 (348)
190 PF04413 Glycos_transf_N: 3-De 73.5 19 0.00041 36.9 9.1 71 409-492 95-165 (186)
191 KOG4626 O-linked N-acetylgluco 71.4 48 0.001 39.8 12.5 188 564-779 751-946 (966)
192 PLN03015 UDP-glucosyl transfer 71.2 2.2E+02 0.0048 33.7 29.4 50 682-731 364-424 (470)
193 PF03033 Glyco_transf_28: Glyc 70.4 5.5 0.00012 38.0 4.2 27 303-341 8-34 (139)
194 PF04230 PS_pyruv_trans: Polys 69.2 1.5E+02 0.0032 30.8 16.3 96 586-699 189-284 (286)
195 PLN02764 glycosyltransferase f 69.1 1.4E+02 0.0031 35.1 16.1 91 645-749 319-420 (453)
196 PLN02207 UDP-glycosyltransfera 67.7 1.4E+02 0.0029 35.4 15.6 79 643-731 332-424 (468)
197 PF01975 SurE: Survival protei 67.1 33 0.00072 35.6 9.3 37 281-343 1-37 (196)
198 PRK02122 glucosamine-6-phospha 62.2 21 0.00045 44.0 7.7 42 278-342 367-408 (652)
199 COG4567 Response regulator con 62.0 35 0.00076 33.9 7.6 165 604-806 8-181 (182)
200 PF03016 Exostosin: Exostosin 59.5 20 0.00044 38.9 6.5 69 658-727 228-299 (302)
201 PRK13932 stationary phase surv 56.7 1.4E+02 0.003 32.4 12.0 38 279-343 4-41 (257)
202 COG2910 Putative NADH-flavin r 56.5 11 0.00024 38.7 3.3 33 281-342 1-33 (211)
203 COG1703 ArgK Putative periplas 54.8 2.6E+02 0.0057 31.1 13.6 105 320-442 70-176 (323)
204 PRK05562 precorrin-2 dehydroge 53.2 3.1E+02 0.0066 29.2 16.3 139 590-755 35-180 (223)
205 TIGR00715 precor6x_red precorr 50.6 52 0.0011 35.6 7.7 85 635-730 166-254 (256)
206 COG1647 Esterase/lipase [Gener 50.6 37 0.0008 35.9 6.1 44 396-441 73-116 (243)
207 TIGR00087 surE 5'/3'-nucleotid 50.1 1.9E+02 0.0041 31.2 11.7 35 407-441 84-129 (244)
208 PF15024 Glyco_transf_18: Glyc 48.9 1.6E+02 0.0034 35.5 11.6 160 573-777 276-461 (559)
209 PLN02534 UDP-glycosyltransfera 47.2 4.4E+02 0.0095 31.4 15.3 77 643-731 344-442 (491)
210 KOG1192 UDP-glucuronosyl and U 45.8 3.8E+02 0.0083 31.3 14.8 137 574-744 278-429 (496)
211 PRK06988 putative formyltransf 45.0 1.8E+02 0.0038 32.5 11.0 18 321-341 17-34 (312)
212 PRK08057 cobalt-precorrin-6x r 44.2 2.1E+02 0.0045 30.9 11.0 33 408-440 64-100 (248)
213 PF10649 DUF2478: Protein of u 44.1 41 0.00089 33.7 5.2 41 659-699 85-131 (159)
214 COG0482 TrmU Predicted tRNA(5- 43.2 43 0.00092 37.9 5.7 105 303-441 11-125 (356)
215 PRK10840 transcriptional regul 42.9 3.1E+02 0.0066 28.0 11.9 110 605-731 3-124 (216)
216 PRK13933 stationary phase surv 42.2 2.8E+02 0.006 30.1 11.5 35 406-440 84-129 (253)
217 PF05686 Glyco_transf_90: Glyc 42.0 65 0.0014 37.2 7.2 73 687-763 233-309 (395)
218 smart00672 CAP10 Putative lipo 38.8 1.6E+02 0.0034 31.9 9.1 47 722-772 203-249 (256)
219 KOG1021 Acetylglucosaminyltran 37.6 2.4E+02 0.0051 33.4 11.1 96 658-759 335-433 (464)
220 cd07944 DRE_TIM_HOA_like 4-hyd 36.4 5.9E+02 0.013 27.6 15.6 154 585-758 104-265 (266)
221 PRK13935 stationary phase surv 36.3 3.4E+02 0.0073 29.5 11.0 34 407-440 84-128 (253)
222 PRK00676 hemA glutamyl-tRNA re 35.6 7E+02 0.015 28.3 13.8 125 604-752 173-305 (338)
223 COG0496 SurE Predicted acid ph 35.5 2.1E+02 0.0045 31.0 9.2 33 408-441 82-126 (252)
224 TIGR02990 ectoine_eutA ectoine 34.8 5.2E+02 0.011 27.7 12.2 33 408-440 180-214 (239)
225 PRK13398 3-deoxy-7-phosphohept 34.5 4.4E+02 0.0095 28.7 11.7 111 577-699 28-142 (266)
226 PF03308 ArgK: ArgK protein; 34.1 5.4E+02 0.012 28.1 12.0 102 320-441 48-153 (266)
227 PF02571 CbiJ: Precorrin-6x re 33.9 2.8E+02 0.006 29.9 10.0 35 668-702 195-230 (249)
228 COG0569 TrkA K+ transport syst 32.0 2E+02 0.0043 30.4 8.5 34 408-441 65-102 (225)
229 PF03668 ATP_bind_2: P-loop AT 31.8 1.3E+02 0.0029 33.0 7.1 63 252-342 218-280 (284)
230 PF00551 Formyl_trans_N: Formy 31.0 5.3E+02 0.012 26.0 11.1 42 395-441 68-109 (181)
231 PRK00346 surE 5'(3')-nucleotid 29.0 6.4E+02 0.014 27.3 11.7 34 407-440 80-124 (250)
232 PF08672 APC2: Anaphase promot 29.0 30 0.00064 28.9 1.2 35 7-41 14-51 (60)
233 PRK13931 stationary phase surv 28.4 5E+02 0.011 28.2 10.8 33 408-440 86-129 (261)
234 COG3171 Uncharacterized protei 28.3 52 0.0011 30.8 2.7 32 234-265 25-60 (119)
235 KOG0995 Centromere-associated 28.2 1.1E+02 0.0023 36.6 5.9 99 177-315 74-172 (581)
236 PRK10360 DNA-binding transcrip 28.2 5.7E+02 0.012 25.0 11.8 74 658-731 37-116 (196)
237 PLN00016 RNA-binding protein; 28.0 56 0.0012 37.1 3.7 19 320-342 71-89 (378)
238 PRK10427 putative PTS system f 27.9 1.1E+02 0.0024 28.9 5.0 42 279-342 1-42 (114)
239 PRK11519 tyrosine kinase; Prov 27.5 8.7E+02 0.019 30.4 14.3 42 400-441 626-669 (719)
240 PF03358 FMN_red: NADPH-depend 27.1 88 0.0019 30.3 4.5 39 281-341 1-39 (152)
241 PF04392 ABC_sub_bind: ABC tra 26.4 3.4E+02 0.0073 29.6 9.4 70 626-698 146-218 (294)
242 COG2236 Predicted phosphoribos 25.7 1.5E+02 0.0032 30.8 5.8 48 388-436 9-56 (192)
243 PF13407 Peripla_BP_4: Peripla 25.5 2.6E+02 0.0056 29.1 8.1 40 661-700 49-89 (257)
244 PF04844 Ovate: Transcriptiona 25.0 1.1E+02 0.0025 25.5 3.9 47 11-58 10-56 (59)
245 PRK08229 2-dehydropantoate 2-r 25.0 63 0.0014 36.1 3.3 17 321-341 17-33 (341)
246 PTZ00215 ribose 5-phosphate is 24.4 89 0.0019 31.1 3.8 32 279-333 1-34 (151)
247 PLN02657 3,8-divinyl protochlo 23.9 62 0.0013 37.1 3.1 51 263-342 43-93 (390)
248 TIGR01162 purE phosphoribosyla 23.2 7.7E+02 0.017 24.7 13.3 121 609-747 3-140 (156)
249 COG1618 Predicted nucleotide k 23.1 1.6E+02 0.0034 29.9 5.2 72 659-731 93-175 (179)
250 PRK13934 stationary phase surv 23.0 6.3E+02 0.014 27.6 10.3 36 281-343 1-36 (266)
251 TIGR01501 MthylAspMutase methy 23.0 1.9E+02 0.0042 28.2 5.8 61 169-248 59-119 (134)
252 PF06258 Mito_fiss_Elm1: Mitoc 23.0 7E+02 0.015 27.8 11.0 138 572-718 111-258 (311)
253 cd05312 NAD_bind_1_malic_enz N 22.9 8.4E+02 0.018 26.9 11.3 29 668-696 106-137 (279)
254 PRK05647 purN phosphoribosylgl 22.2 7.7E+02 0.017 25.5 10.5 21 395-418 69-89 (200)
255 COG1832 Predicted CoA-binding 22.0 7.6E+02 0.016 24.3 9.4 107 280-436 16-124 (140)
256 CHL00194 ycf39 Ycf39; Provisio 21.9 73 0.0016 35.1 3.1 19 320-342 15-33 (317)
257 PRK09739 hypothetical protein; 21.8 1.4E+02 0.0031 30.6 5.1 36 280-333 3-38 (199)
258 TIGR00732 dprA DNA protecting 21.8 5E+02 0.011 27.4 9.1 49 661-709 149-206 (220)
259 PRK13288 pyrophosphatase PpaX; 21.8 4.5E+02 0.0097 26.9 8.8 121 585-727 83-210 (214)
260 COG2120 Uncharacterized protei 21.5 2.3E+02 0.0049 30.3 6.6 33 280-333 10-42 (237)
261 cd03146 GAT1_Peptidase_E Type 21.4 5.7E+02 0.012 26.6 9.5 110 577-702 3-125 (212)
262 COG1618 Predicted nucleotide k 20.9 9.1E+02 0.02 24.7 12.0 36 277-333 2-37 (179)
263 PRK04020 rps2P 30S ribosomal p 20.8 7.1E+02 0.015 26.1 9.8 105 584-706 47-153 (204)
264 cd00762 NAD_bind_malic_enz NAD 20.7 4.7E+02 0.01 28.4 8.7 37 660-697 98-139 (254)
No 1
>PLN00142 sucrose synthase
Probab=100.00 E-value=9.3e-195 Score=1710.67 Aligned_cols=813 Identities=68% Similarity=1.133 Sum_probs=785.8
Q ss_pred CCCCCCCccccchHhhHHHHHHHcHHHHHHHHHHHHhcCCCccchhHHHHHHHHHhhhhhhhcccccCcHHHHHhhccee
Q 002909 1 MSSSPSLKRSDTIADTMPDALRQSRYYMKKCFSRFVAKGKRLMKRHHLMDEVEKSIEDKIERGKVLEGLLGYILSSTQEA 80 (867)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (867)
||++++|+|++||+|+++++|++|||+|++||+||+++||++|++|||+++|++++.+..+..++.+|+||++|++||||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 80 (815)
T PLN00142 1 AAAAPVLTRSHSIRERVPDALSQHRNELKALLSRYVAQGKGILQPHQLIDELEAVIDDDEERKKLLDGPFGDILRSTQEA 80 (815)
T ss_pred CCCcccccccccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHhhhhhhhhhhccCcHHHHHHhhhhh
Confidence 67889999999999999999999999999999999999999999999999999998776667789999999999999999
Q ss_pred eecCCeEEEEEcCCCceEEEEEEecCCcceeecChhHhhhccceeccCCCCCCCCceeeecccCcCCCCCCCCCCCcCcc
Q 002909 81 AVVPPNVAFAVRPNPGSWEYVKVNSEDLTVDGINVLEYLKFKETIFDQDWAKDENALELDFGAMDFSSPHLTLSSSIGNG 160 (867)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (867)
||.|||||||||||||+|||||||++||+||+|||+|||+|||+|||+++ +++++|||||+|||++|||+|+|+|||||
T Consensus 81 ~~~~~~~~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~yl~~ke~~~~~~~-~~~~~le~d~~pf~~~~p~~~~~~~ig~g 159 (815)
T PLN00142 81 IVLPPFVALAVRPRPGVWEYVRVNVSELSVEELTVSEYLKFKEELVDGSW-NDNFVLELDFEPFNASFPRPTLSSSIGNG 159 (815)
T ss_pred hccCCeeEEEEcCCCcceEEEEEEhhhCceeeecHHHhhhhhHhhcCccc-CCCceEEEecccccccCCCCCCccccccc
Confidence 99999999999999999999999999999999999999999999999965 79999999999999999999999999999
Q ss_pred hhhhhhhhhccccCCchhhHHHHHHHHhcccCCceeeccCcCCCHHHHHHHHHHHHHHhccCCCCCChhHHHHHHhhcCC
Q 002909 161 VNYVSKFMSTRLSANSEKAKQFLDYLLALNHRGEQLMINDTLDTVDKLQAALIAAEVSISDLPKDTPYQEFQQRFKEWGF 240 (867)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (867)
|+|||||||||||+|++++++||||||+|+|+|++|||||||+|+++||++|++|++||+++|+||||++|+++||+|||
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g~ 239 (815)
T PLN00142 160 VQFLNRHLSSKLFRDKESLEPLLDFLRAHNHKGETLMLNDRIQTLSKLQSALRKAEEYLSKLPKDTPYSEFEHRFQELGL 239 (815)
T ss_pred HHHHHHHHHHhhccCchhhhhHHHHHHHhhcCCceeeecCCCCCHHHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCcHHHHHHHHHHHHHhhcCCChhhHHHHHhcCCCcceEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHH
Q 002909 241 EKGWGNTAERVRETMRLFSEALQAPDAAKLQVLFSRLPNMFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEE 320 (867)
Q Consensus 241 ~~~~g~~~~~~~~~~~~~~~~~~~p~~~~l~~f~~r~pm~~rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~e 320 (867)
||||||||+||+|||++|+|+|++|||++||+|++||||+|||++||+||||+|.+++|+||||||++||+|||||||++
T Consensus 240 ~~gwg~~~~~~~~~~~~l~~~~~~p~~~~~e~f~~~~p~~~~i~~iS~Hg~~~~~~~lG~~DtGGQ~vYVl~~aral~~e 319 (815)
T PLN00142 240 EKGWGDTAERVLETIHLLLDLLQAPDPSTLEKFLGRIPMVFNVVIFSPHGYFGQANVLGLPDTGGQVVYILDQVRALENE 319 (815)
T ss_pred CCCcCccHHHHHHHHHHHHHHHhCCChhHHHHHHhhhhHhHhhheecccccccccccCCCCCCCCceehHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCceeeccEEEecCCCCCCCCCCCCccccccCCCCeEEEEccCCCcccccccccccccchhhHHHHHHHHHH
Q 002909 321 LLLRIKQQGLSVKPQILVVTRLIPNSKGTKCSQELEPIYDTKHSHILRIPFKTEQAILPQWVSRFDIYPYLGRFAQDATA 400 (867)
Q Consensus 321 La~~L~~~GheV~~~V~VvT~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~l~~~isr~~i~p~l~~f~~~~~~ 400 (867)
|+++|+++||+|+|+|+|+||.++++.|+.|+++.|.+.++++++|+|+||++.++++++|++|+++|||+..|+.++.+
T Consensus 320 l~~~l~~~G~~v~~~v~i~TR~i~~~~~~~~~~~~e~v~~~~~~~I~rvP~g~~~~~l~~~i~ke~l~p~L~~f~~~~~~ 399 (815)
T PLN00142 320 MLLRIKQQGLDIKPQILIVTRLIPDAKGTTCNQRLEKVSGTEHSHILRVPFRTEKGILRKWISRFDVWPYLETFAEDAAS 399 (815)
T ss_pred HHHHHHhcCCCccceeEEEEeccCCccCCcccCcceeccCCCceEEEecCCCCCccccccccCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999778999999999999999999999999
Q ss_pred HHHHHcCCCCeEEEECCCChHHHHHHHHHhcCCcEEEEEcCCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEE
Q 002909 401 KILDLMEGKPDLIIGNYSDGNLVASLMASKLGITQATIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFI 480 (867)
Q Consensus 401 ~i~~~l~~kPDIIh~h~~~~~l~a~lla~~~gip~V~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~I 480 (867)
.+.+..+++||+||+|||+++++|.++++++|||+|+|+|++++.++..++.+|+..+..|+|++++++|.++++.||+|
T Consensus 400 ~~~~~~~~~PDlIHaHYwdsg~vA~~La~~lgVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~~~r~~aE~~a~~~Ad~I 479 (815)
T PLN00142 400 EILAELQGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQFTADLIAMNHADFI 479 (815)
T ss_pred HHHHhcCCCCCEEEECCccHHHHHHHHHHHhCCCEEEEcccchhhhccccCCcccccchhhhhhhchHHHHHHHHhhhHH
Confidence 99877778999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCHHHHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhccc
Q 002909 481 ITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKE 560 (867)
Q Consensus 481 Ia~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~ 560 (867)
|++|+++++++++.++||++|.+|++|++|++++||+++++|++|||||+|...|.|+.....+.+.+++.|++++|++.
T Consensus 480 IasT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl~~l~n~I~~~l~~~~ 559 (815)
T PLN00142 480 ITSTYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLTSLHPSIEELLYSPE 559 (815)
T ss_pred HhCcHHHHhcccchhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHhhHHhhcccchhhcCChH
Confidence 99999999999999999999999999999999999999999999999999999999998888888889999999999999
Q ss_pred ccccccccccCCCCcEEEEEeccCCcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcC
Q 002909 561 DNSEHIGYLADRKKPIIFSMARLDTVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQ 640 (867)
Q Consensus 561 ~~~~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~ 640 (867)
+.++++|++.++++++|+++||+++.||++.|++|++++.+..++++|+|+|++.++..+.+.++.++.+++++++++++
T Consensus 560 ~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~lg 639 (815)
T PLN00142 560 QNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYN 639 (815)
T ss_pred HHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcEEEEEECCccccccccHHHHHHHHHHHHHHHHcC
Confidence 99899998778889999999999999999999999999987778899999999854445567777788899999999999
Q ss_pred CCCcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCCccceeecCceEEEeCCCCH
Q 002909 641 LQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDPNNG 720 (867)
Q Consensus 641 L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~p~d~ 720 (867)
+.++|+|+|.+.+..+.+++++++++++|+||+||++|+||++++|||+||+|||+|+.||+.|+|.+|++|++++|+|+
T Consensus 640 L~~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG~~EIV~dG~tG~LV~P~D~ 719 (815)
T PLN00142 640 LKGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPAEIIVDGVSGFHIDPYHG 719 (815)
T ss_pred CCCcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCH
Confidence 99999999988877888999999997689999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhHHHHHHHhhccchHHHHHHHHHHHHhhhhh
Q 002909 721 DESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKVLNMGSIYGFWRQINKEPKLAKQRYIQMFYSLLFRK 800 (867)
Q Consensus 721 e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll~ly~~~~f~~~~~~~~~~~~~~yle~~~~L~~r~ 800 (867)
+++|++|.+++++|..|++.|++|+++|++++.++|||+.++++++++..+|+||+++++++|++++||+||||.|+||+
T Consensus 720 eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~ 799 (815)
T PLN00142 720 DEAANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLGGVYGFWKYVSKLERRETRRYLEMFYNLKFRE 799 (815)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcchhhhcchHhHHHHHHHHHHHHHhhhHH
Confidence 99999999999888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCCC
Q 002909 801 LASNVPIKVPEPLQ 814 (867)
Q Consensus 801 la~~vpl~~~~~~~ 814 (867)
+|+.+|++++++.+
T Consensus 800 ~~~~~~~~~~~~~~ 813 (815)
T PLN00142 800 LAKTVPLAVDDPQP 813 (815)
T ss_pred HhhcCCcccccCCC
Confidence 99999999986554
No 2
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=100.00 E-value=2.9e-187 Score=1647.70 Aligned_cols=783 Identities=61% Similarity=1.036 Sum_probs=757.3
Q ss_pred HHHHHHHHHHHHhcCCCccchhHHHHHHHHHhhhhhhhcccccCcHHHHHhhcceeeecCCeEEEEEcCCCceEEEEEEe
Q 002909 25 RYYMKKCFSRFVAKGKRLMKRHHLMDEVEKSIEDKIERGKVLEGLLGYILSSTQEAAVVPPNVAFAVRPNPGSWEYVKVN 104 (867)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (867)
|++|++||+||+++||++||+|||+++|+++|.+..+..++.+|+||++|++||||||.|||||||||||||+|||||||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qe~~~~~~~~~~~~r~~~~~~~~~~~~ 80 (784)
T TIGR02470 1 RAELRQLLSRYVSQGKRYLLRHQLLDEFEQYCSDADKEKKLSESALGKLIFSTQEAIVLPPWVALAVRPRIGVWEYVRVN 80 (784)
T ss_pred ChHHHHHHHHHHhcCCCcccHHHHHHHHHHHhhhhhhhhhhccCcHHHHHHhhhhheecCCeeEEEEcCCCcceEEEEEE
Confidence 68999999999999999999999999999999877777789999999999999999999999999999999999999999
Q ss_pred cCCcceeecChhHhhhccceeccCCCCCCCCceeeecccCcCCCCCCCCCCCcCcchhhhhhhhhccccCCchhhHHHHH
Q 002909 105 SEDLTVDGINVLEYLKFKETIFDQDWAKDENALELDFGAMDFSSPHLTLSSSIGNGVNYVSKFMSTRLSANSEKAKQFLD 184 (867)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (867)
++||+||+||++|||+|||+|||++ .+++++|||||+|||++||+|++||||||||+|||||||||||+|++++++|||
T Consensus 81 ~~~l~~~~~~~~~yl~~ke~~~~~~-~~~~~~le~d~~pf~~~~p~~~~~~~ig~g~~~~~r~~s~~~~~~~~~~~~~~~ 159 (784)
T TIGR02470 81 VEELSVEELTISEYLDFKEQLVNGH-PNDGFVLELDFEPFNASFPRPSDSKSIGNGVQFLNRHLSSKLFQDPESMEPLLN 159 (784)
T ss_pred hhhCceeeecHHHHhhhhHhhcCcc-cCCCceEEEecccccccCCCCCCcccccccHHHHHHHHHHHhcCCchhhhhHHH
Confidence 9999999999999999999999995 489999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcccCCceeeccCcCCCHHHHHHHHHHHHHHhccCCCCCChhHHHHHHhhcCCccccCCcHHHHHHHHHHHHHhhcC
Q 002909 185 YLLALNHRGEQLMINDTLDTVDKLQAALIAAEVSISDLPKDTPYQEFQQRFKEWGFEKGWGNTAERVRETMRLFSEALQA 264 (867)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 264 (867)
|||.|+|+|++|||||||+|+++||+||++|++||+++|+||||++|+++||+|||||||||||+||+|||++|+|+|++
T Consensus 160 ~l~~~~~~g~~~~~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g~~~gwg~~~~~~~~~~~~l~~~~~~ 239 (784)
T TIGR02470 160 FLRVHNYNGIQLMINDRIQSVSHLQSQLRKAEEFLSALPPDTPYSEFEFELQELGFEPGWGDTAQRVLETLHLLDDLLEA 239 (784)
T ss_pred HHHHhccCCceeeecCCCCCHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHhCCCCCcCccHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChhhHHHHHhcCCCcceEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCCC
Q 002909 265 PDAAKLQVLFSRLPNMFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLIP 344 (867)
Q Consensus 265 p~~~~l~~f~~r~pm~~rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~~ 344 (867)
|||++||+|++||||+|||++||+|||++|.+++|+||+|||++||+||||+||++|+++|+++||+|+|+|+|+||.++
T Consensus 240 p~~~~~e~f~~~~p~~~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~ 319 (784)
T TIGR02470 240 PDPSVLEAFLGRIPMVFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIP 319 (784)
T ss_pred CChhHHHHHHhhCCccceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccccccCCCCeEEEEccCCCccc-ccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEECCCChHHH
Q 002909 345 NSKGTKCSQELEPIYDTKHSHILRIPFKTEQA-ILPQWVSRFDIYPYLGRFAQDATAKILDLMEGKPDLIIGNYSDGNLV 423 (867)
Q Consensus 345 ~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~-~l~~~isr~~i~p~l~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~l~ 423 (867)
++.++.|+++.+.+.++++++|+|+|+++..+ ++++|++++++|||+..|+.++.+.+....+++||+||+|||+++++
T Consensus 320 ~~~~~~~~~~~e~~~~~~~~~I~rvp~g~~~~~~~~~~i~k~~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glv 399 (784)
T TIGR02470 320 DAEGTTCNQRLEKVYGTEHAWILRVPFRTENGIILRNWISRFEIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLV 399 (784)
T ss_pred CccccccccccccccCCCceEEEEecCCCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHH
Confidence 99999999999999999999999999999877 79999999999999999999999999877778999999999999999
Q ss_pred HHHHHHhcCCcEEEEEcCCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHHHHhhcCCCCCccccccc
Q 002909 424 ASLMASKLGITQATIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQEIAGSKDRPGQYESHTA 503 (867)
Q Consensus 424 a~lla~~~gip~V~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~~~~~~k~~~gqY~s~~~ 503 (867)
+.++++++|+|+|+|+|+++..++..++.+|...+.+|+|++++++|.++++.||+|||+|+++++++++.++||++|..
T Consensus 400 a~lla~~lgVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~ 479 (784)
T TIGR02470 400 ASLLARKLGVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFSCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQA 479 (784)
T ss_pred HHHHHHhcCCCEEEECCcchhhcccccccccccchhHHHhhhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccccccccccCCCCcEEEEEecc
Q 002909 504 FTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHIGYLADRKKPIIFSMARL 583 (867)
Q Consensus 504 ~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~lGll~~~~k~iIl~vGRL 583 (867)
|++|++|++++||+++++|++|||||+|.+.|.|++....+....++.+++++|++.+.++++|++.++++++|+++||+
T Consensus 480 ft~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL 559 (784)
T TIGR02470 480 FTMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARL 559 (784)
T ss_pred ccccceeeeecCccCCcCCeEEECCCcChhhcCCCCchhhhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCC
Confidence 99999999999999999999999999999999999988878777888999999999999999999888899999999999
Q ss_pred CCcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccccCCCChHHHHHH
Q 002909 584 DTVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTDRYRNGELYRC 663 (867)
Q Consensus 584 ~~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d~v~~~el~~~ 663 (867)
++.||++.|++|++++.+..++++|+|+|++.++..+.|.++.+++++++++++++++.++|+|+|++.+..+.+++|++
T Consensus 560 ~~~KGid~LIeA~~~l~~l~~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~g~V~flG~~~~~~~~~elyr~ 639 (784)
T TIGR02470 560 DRVKNLTGLVECYGRSPKLRELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRY 639 (784)
T ss_pred CccCCHHHHHHHHHHhHhhCCCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCCCCeEEEccCcCCcccHHHHHHH
Confidence 99999999999999987777789999999987666677888888999999999999999999999987666778899999
Q ss_pred HHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCCccceeecCceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHH
Q 002909 664 IADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQ 743 (867)
Q Consensus 664 la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~ 743 (867)
+++++|+||+||++|+||++++|||+||+|||+|++||+.|+|.++.+|++++|+|++++|++|.+++++|..|++.|++
T Consensus 640 iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ 719 (784)
T TIGR02470 640 IADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQK 719 (784)
T ss_pred hhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 98778999999999999999999999999999999999999999999999999999999999999999888899999999
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhHHHHHHHhhccchHHHHHHHHHHHHhhhhhcccCCCCC
Q 002909 744 MSAAGRQRIYECYTWKIYANKVLNMGSIYGFWRQINKEPKLAKQRYIQMFYSLLFRKLASNVPIK 808 (867)
Q Consensus 744 m~~~ar~~v~~~ysw~~~a~~ll~ly~~~~f~~~~~~~~~~~~~~yle~~~~L~~r~la~~vpl~ 808 (867)
|+++|++++.++|||+.++++++++..+|+||+++++++|++++||+||||+|+||++|+.+|++
T Consensus 720 ms~~a~~rV~~~FSW~~~A~~ll~l~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 784 (784)
T TIGR02470 720 ISQGGLQRIYEKYTWKIYSERLLTLAGIYGFWKFVSKLEREETRRYLEMFYHLKYRPLAEAVPLA 784 (784)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhhhhHhhhccHHHHHHHHHHHHHHHHhhhHHHHhhccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999863
No 3
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=100.00 E-value=1.7e-169 Score=1388.77 Aligned_cols=550 Identities=61% Similarity=1.002 Sum_probs=474.5
Q ss_pred ccccchHhhHHHHHHHcHHHHHHHHHHHHhcCCCccchhHHHHHHHHHhhhhhhhcccccCcHHHHHhhcceeeecCCeE
Q 002909 8 KRSDTIADTMPDALRQSRYYMKKCFSRFVAKGKRLMKRHHLMDEVEKSIEDKIERGKVLEGLLGYILSSTQEAAVVPPNV 87 (867)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (867)
||++||+|+|+++|++||++|++||+||+++||+|||||||+++|+++|+++....++.+|+||++|++||||||.||||
T Consensus 1 tr~~s~~e~~~~~L~~~R~~l~~llsr~~~~gk~~l~r~~ll~ef~~~~~~~~~~~~~~~g~lg~ll~~tQEaIv~pp~v 80 (550)
T PF00862_consen 1 TRSHSIRERVPDTLSQHRNELKRLLSRYVAQGKRYLLRHDLLDEFEAYCEDDKEKLFLLSGPLGELLRSTQEAIVLPPWV 80 (550)
T ss_dssp -------GGGTTTGGGTTSHHHHHHHHHHHHHTSSEEEECHHHHHTHHHHSTTTGCCT--STHHHHHHTEEEEEECSSEE
T ss_pred CcchhHHHHHHHHHHHhHHHHHHHHHHHHHcCcccccHHHHHHHHHHHHhcccchhhcccchHHHHHHhcceeEecCCeE
Confidence 79999999999999999999999999999999999999999999999997766668888999999999999999999999
Q ss_pred EEEEcCCCceEEEEEEecCCcceeecChhHhhhccceeccCCCCCCCCceeeecccCcCCCCCCCCCCCcCcchhhhhhh
Q 002909 88 AFAVRPNPGSWEYVKVNSEDLTVDGINVLEYLKFKETIFDQDWAKDENALELDFGAMDFSSPHLTLSSSIGNGVNYVSKF 167 (867)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (867)
|||||||||+|||||||+++|+||+|||+|||+|||+|||+ .++++++|||||+|||++||+|++||||||||+|||||
T Consensus 81 ~lavRPrpg~WeyvRv~~~~L~vE~ltvseyL~fKE~LV~~-~~~~~~vLElDf~PFn~~~Prlt~s~sIGnGv~FLNR~ 159 (550)
T PF00862_consen 81 ALAVRPRPGVWEYVRVNVDDLSVEELTVSEYLKFKERLVDG-SANDEFVLELDFEPFNASFPRLTDSSSIGNGVQFLNRH 159 (550)
T ss_dssp EEEEEEETTEEEEEEEESSSSEEEEE-HHHHHHHHHHHHHS-S-SSTTS-EEE-GGGHTTS----SGGGTTBHHHHHHHH
T ss_pred EEEEcCCCccEEEEEEEhhhCcceecCHHHHHHHHHHHcCC-ccCCCCeeeeecccccccCCCCCCcccccccHHHHHHH
Confidence 99999999999999999999999999999999999999999 57899999999999999999999999999999999999
Q ss_pred hhccccCCchhhHHHHHHHHhcccCCceeeccCcCCCHHHHHHHHHHHHHHhccCCCCCChhHHHHHHhhcCCccccCCc
Q 002909 168 MSTRLSANSEKAKQFLDYLLALNHRGEQLMINDTLDTVDKLQAALIAAEVSISDLPKDTPYQEFQQRFKEWGFEKGWGNT 247 (867)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 247 (867)
||||||+|++|+++|||||+.|+|+|++|||||||+|+++||+||++|++||+++|+||||++|+++||+||||||||||
T Consensus 160 LSsklf~d~e~~~~Ll~fL~~h~~~G~~Lmlndri~s~~~L~~aL~~A~~~L~~~p~~tpy~~f~~~~q~~Gfe~GWG~t 239 (550)
T PF00862_consen 160 LSSKLFQDKESLEPLLDFLRVHNYNGQQLMLNDRIQSVSKLQSALRKAEEFLSKLPPDTPYSEFEHKLQELGFEPGWGDT 239 (550)
T ss_dssp HHHHHTT-HHHHHHHHHHHHH-EETTEEBSB-TT--SHHHHHHHHHHHHHHHHHS-TT-BHHHHHHHHHHHTB-B-S-SB
T ss_pred HHHHhcCChHHHHHHHHHHHHhccCCeEeeecCCCCCHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCChhhHHHHHhcCCCcceEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHH
Q 002909 248 AERVRETMRLFSEALQAPDAAKLQVLFSRLPNMFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQ 327 (867)
Q Consensus 248 ~~~~~~~~~~~~~~~~~p~~~~l~~f~~r~pm~~rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~ 327 (867)
|+||+|||++|+|+|+||||++||+|++||||+|+|+|+||||||+|++|+|+||||||++||+|||||||++|..++..
T Consensus 240 a~rv~et~~lL~dll~aPdp~~LE~Fl~RiPmvf~vvliSpHG~f~q~nvLG~pDTGGQVvYVleqarALe~e~~~ri~~ 319 (550)
T PF00862_consen 240 AERVLETMHLLSDLLEAPDPSTLEKFLSRIPMVFNVVLISPHGYFGQENVLGRPDTGGQVVYVLEQARALENEMLYRIKL 319 (550)
T ss_dssp HHHHHHHHHHHHHHHHS--HHHHHHHHHHS---SEEEEE--SS--STTSTTSSTTSSHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCchHHHHHhhhcceeEEEEEEcCccccccccccCCCCCCCcEEEEeHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeeccEEEecCCCCCCCCCCCCccccccCCCCeEEEEccCCCcccccccccccccchhhHHHHHHHHHHHHHHHcC
Q 002909 328 QGLSVKPQILVVTRLIPNSKGTKCSQELEPIYDTKHSHILRIPFKTEQAILPQWVSRFDIYPYLGRFAQDATAKILDLME 407 (867)
Q Consensus 328 ~GheV~~~V~VvT~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~l~~~isr~~i~p~l~~f~~~~~~~i~~~l~ 407 (867)
+|.+|.|+|+|+||.+|++.|++|+++.+++.+++|++|+|+||++.+|++++|++|+++|||++.|+.++.+++.++++
T Consensus 320 ~gl~i~p~i~i~TRlIpd~~~t~~~q~le~~~gt~~a~IlRvPF~~~~gi~~kwisrf~lWPyLe~fa~d~~~~i~~e~~ 399 (550)
T PF00862_consen 320 QGLDITPKIDIVTRLIPDAKGTTCNQRLEKVSGTENARILRVPFGPEKGILRKWISRFDLWPYLEEFADDAEREILAELQ 399 (550)
T ss_dssp TT-----EEEEEEE--TBTTCGGGTSSEEEETTESSEEEEEE-ESESTEEE-S---GGG-GGGHHHHHHHHHHHHHHHHT
T ss_pred cCCCCCCceeeecccccCCcCCCccccccccCCCCCcEEEEecCCCCcchhhhccchhhchhhHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeEEEECCCChHHHHHHHHHhcCCcEEEEEcCCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHHH
Q 002909 408 GKPDLIIGNYSDGNLVASLMASKLGITQATIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQE 487 (867)
Q Consensus 408 ~kPDIIh~h~~~~~l~a~lla~~~gip~V~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~~ 487 (867)
++||+||+||+++|++|.++++++|+|+|+|.|+++++||..++++|++++.+|||+|+|++|.++|++||+|||+|+||
T Consensus 400 ~~PdlI~GnYsDgnlvA~LLs~~lgv~~~~iaHsLek~Ky~~s~~~w~e~e~~Yhfs~qftAd~iamn~adfIItST~QE 479 (550)
T PF00862_consen 400 GKPDLIIGNYSDGNLVASLLSRKLGVTQCFIAHSLEKTKYEDSDLYWKEIEEKYHFSCQFTADLIAMNAADFIITSTYQE 479 (550)
T ss_dssp S--SEEEEEHHHHHHHHHHHHHHHT-EEEEE-SS-HHHHHHTTTTTSHHHHHHH-HHHHHHHHHHHHHHSSEEEESSHHH
T ss_pred CCCcEEEeccCcchHHHHHHHhhcCCceehhhhccccccccccCCCHHHHHhhccchhhhhHHHHHhhcCCEEEEcchHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhc
Q 002909 488 IAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYS 558 (867)
Q Consensus 488 ~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~ 558 (867)
++++++++|||++|.+||||+||++++||++|++|++|||||+|.++|+|++++++|++.+|++|+++||+
T Consensus 480 I~g~~~~~gqyes~~~ftlpgLyrvv~Gi~vFdPkfNiv~PGad~~iyFpyt~~~~Rl~~~~~~ie~Llfs 550 (550)
T PF00862_consen 480 IAGQKDTVGQYESHKAFTLPGLYRVVNGIDVFDPKFNIVSPGADESIYFPYTEKERRLTSLHPEIEELLFS 550 (550)
T ss_dssp HHB-SSSBHTTGGGSSEEETTTEEEEES--TT-TTEEE------TTTS--TT-TTTS-GGGHHHHHHHHH-
T ss_pred hcCCccccCCccchhhcchHhHHhhhccccccCCcccccCCCCCcceecCCccccccchhhhHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999985
No 4
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=100.00 E-value=9.5e-57 Score=542.54 Aligned_cols=449 Identities=26% Similarity=0.455 Sum_probs=349.6
Q ss_pred CcceEEEEccCccCCcccc-cCC-CCcccchhHhHHHHHHHHHHHHHHHHHCC--CceeeccEEEecCCCCC-CCCCCCC
Q 002909 279 NMFNVVIFSPHGYFGQADV-LGL-PDTGGQVVYILDQVRALEEELLLRIKQQG--LSVKPQILVVTRLIPNS-KGTKCSQ 353 (867)
Q Consensus 279 m~~rI~ivs~hg~p~~~~v-lG~-pdtGG~~vyvld~araL~~eLa~~L~~~G--heV~~~V~VvT~~~~~~-~g~~~~~ 353 (867)
+.|.|++||+||.|.+.++ +|+ +|+|||.+||++ |+++|+++| |+|+ |+||.+.++ .++.|.+
T Consensus 168 ~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~E--------LAraLa~~~gv~~Vd----l~TR~~~~~~~~~~y~~ 235 (1050)
T TIGR02468 168 KKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVVE--------LARALGSMPGVYRVD----LLTRQVSSPDVDWSYGE 235 (1050)
T ss_pred CceEEEEEccccCccccCcccCCCCCCCChHHHHHH--------HHHHHHhCCCCCEEE----EEeCCcCccccccccCC
Confidence 3589999999999988887 885 999999999995 555666688 8999 999988653 2444666
Q ss_pred ccccc------------cCCCCeEEEEccCCCcccccccccccccchhhHHHHHHHHHHHHHHH-------c----CCCC
Q 002909 354 ELEPI------------YDTKHSHILRIPFKTEQAILPQWVSRFDIYPYLGRFAQDATAKILDL-------M----EGKP 410 (867)
Q Consensus 354 ~~e~i------------~~~~~v~I~rvp~~~~~~~l~~~isr~~i~p~l~~f~~~~~~~i~~~-------l----~~kP 410 (867)
+.|.+ ...+|++|+|+|+++.. +++++..+|||+..|...+...+.+. + ...|
T Consensus 236 p~e~~~~~~~~~~~~~~~~~~g~rIvRip~GP~~----~~l~Ke~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~p 311 (1050)
T TIGR02468 236 PTEMLTPRSSENDGDEMGESSGAYIIRIPFGPRD----KYIPKEELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWP 311 (1050)
T ss_pred ccccccccccccccccccCCCCeEEEEeccCCCC----CCcCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCC
Confidence 65433 34569999999999753 36788999999999999998876541 1 1249
Q ss_pred eEEEECCCChHHHHHHHHHhcCCcEEEEEcCCcccccc----cchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHH
Q 002909 411 DLIIGNYSDGNLVASLMASKLGITQATIAHALEKSKYE----DSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQ 486 (867)
Q Consensus 411 DIIh~h~~~~~l~a~lla~~~gip~V~t~H~l~~~~~~----~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~ 486 (867)
||||+|||+++.++.++++.+++|+|+|.|++...+.. .....+......|++..++.+|..++..||.|||+|.+
T Consensus 312 DvIHaHyw~sG~aa~~L~~~lgVP~V~T~HSLgr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIasT~q 391 (1050)
T TIGR02468 312 YVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITSTRQ 391 (1050)
T ss_pred CEEEECcchHHHHHHHHHHhhCCCEEEECccchhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEeCHH
Confidence 99999999999999999999999999999998766642 12235566778899999999999999999999999999
Q ss_pred HHhhcCCCCCccccccccccccceee-----eccCCC---CCCcEEEeCCCCCCCCCCCCchHhhhhc--------cCCc
Q 002909 487 EIAGSKDRPGQYESHTAFTMPGLCRV-----VSGINV---FDPKFNIAAPGADQSVYFPYTEKQKRLT--------SFHP 550 (867)
Q Consensus 487 ~~~~~k~~~gqY~s~~~~~lp~l~~v-----~~GI~~---~~~ki~VIpnGVD~~~f~p~~~~~~r~~--------~~~~ 550 (867)
+++ .||..|..|. |.++++ ..|+++ +.+++.|||||||.+.|.|......+.. +-.+
T Consensus 392 E~~------eq~~lY~~~~-~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~~ 464 (1050)
T TIGR02468 392 EIE------EQWGLYDGFD-VILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPDP 464 (1050)
T ss_pred HHH------HHHHHhccCC-chhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhcccccccccccc
Confidence 987 3454444444 433333 345543 3569999999999999998643221100 0000
Q ss_pred chHHhhhcccccccccccccCCCCcEEEEEeccCCcCChHHHHHHHHHhHccCC--CeEEEEEeCCCCCCCCCChHHHHH
Q 002909 551 DIEELLYSKEDNSEHIGYLADRKKPIIFSMARLDTVKNITGLTEWYGKNKRLRN--MVNLVVVAGFFDPSKSHDREEIAE 628 (867)
Q Consensus 551 ~i~~~l~~~~~~~~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~--~v~LvIVG~g~~~~~~~d~ee~~~ 628 (867)
.+...+ ..++. ++++++|+++||+.+.||++.||+|++.+.+..+ ++. +|+|++++. .........+
T Consensus 465 ~~~~~l-------~r~~~--~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~-LIiG~gdd~-d~l~~~~~~~ 533 (1050)
T TIGR02468 465 PIWSEI-------MRFFT--NPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDDI-DEMSSGSSSV 533 (1050)
T ss_pred hhhHHH-------Hhhcc--cCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCCCEE-EEEecCchh-hhhhccchHH
Confidence 000000 11222 6788999999999999999999999999975433 444 466776431 0001112245
Q ss_pred HHHHHHHHHHcCCCCcEEEcccccCCCChHHHHHHHHcc---CcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCCccce
Q 002909 629 IKKMHTLIEKYQLQGQFRWIAAQTDRYRNGELYRCIADT---KGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEI 705 (867)
Q Consensus 629 ~~~l~~li~~~~L~~~V~flG~~~d~v~~~el~~~la~~---aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG~~Ei 705 (867)
...+.++++++++.++|.|+|+ ++.+++..+|..+ +|+||+||++|+||++++||||||+|||+|+.||+.|+
T Consensus 534 l~~L~~li~~lgL~g~V~FlG~----v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~~EI 609 (1050)
T TIGR02468 534 LTSVLKLIDKYDLYGQVAYPKH----HKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDI 609 (1050)
T ss_pred HHHHHHHHHHhCCCCeEEecCC----CCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCcHHH
Confidence 6778899999999999999995 4456777777652 37999999999999999999999999999999999999
Q ss_pred eecCceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Q 002909 706 IIDGVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKVLNMGS 770 (867)
Q Consensus 706 I~dg~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll~ly~ 770 (867)
|.++.+|++++|+|++++|++|..++ .|++.|++|+++|++++ ++|||+.++++|++.+.
T Consensus 610 I~~g~nGlLVdP~D~eaLA~AL~~LL----~Dpelr~~m~~~gr~~v-~~FSWe~ia~~yl~~i~ 669 (1050)
T TIGR02468 610 HRVLDNGLLVDPHDQQAIADALLKLV----ADKQLWAECRQNGLKNI-HLFSWPEHCKTYLSRIA 669 (1050)
T ss_pred hccCCcEEEECCCCHHHHHHHHHHHh----hCHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHH
Confidence 99999999999999999999999988 89999999999999998 57999999999998644
No 5
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=100.00 E-value=3.1e-56 Score=500.05 Aligned_cols=485 Identities=39% Similarity=0.596 Sum_probs=422.7
Q ss_pred eccCcCCCHHHHHHHHHHHHHHhccCCCCCChhHHHHHHhhcCCccccCCcHHHHHHHHHHHHHhhcCCChhhHHHHHhc
Q 002909 197 MINDTLDTVDKLQAALIAAEVSISDLPKDTPYQEFQQRFKEWGFEKGWGNTAERVRETMRLFSEALQAPDAAKLQVLFSR 276 (867)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~l~~f~~r 276 (867)
|+||++++...||+.+.+|+..++.. .+||+..|.+.++..++++|||+++.+|.+++++++
T Consensus 1 ~~~~~~~~~~~~qk~~~~~m~~~~~~-~~t~~~~~~~~~~~~~~~~~gg~er~~v~~~~~l~s----------------- 62 (495)
T KOG0853|consen 1 MTNDSSSNISELQKVLWKAMIEKSLL-VSTPEKPFEHVTFIHPDLGIGGAERLVVDAAVHLLS----------------- 62 (495)
T ss_pred CcchhhhHHHHhhhhhhhhhhhhhcc-cccccccchhheeeccccccCchHHHhHHHHHHHHh-----------------
Confidence 78999999999999999999999999 999999999999999999999999999999999998
Q ss_pred CCCcceEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCCCCCCCCCCCCccc
Q 002909 277 LPNMFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLIPNSKGTKCSQELE 356 (867)
Q Consensus 277 ~pm~~rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~~~~~g~~~~~~~e 356 (867)
++. ++|.||+||+++|+++++++|+.+|..+..+.+.++++.|.|++...|...| +..+
T Consensus 63 ----------------~~~-~lg~~d~G~qV~~l~~h~~al~~~~~~~~~~~~l~~~~~i~vv~~~lP~~~~----~~~~ 121 (495)
T KOG0853|consen 63 ----------------GQD-VLGLPDTGGQVVYLTSHEDALEMPLLLRCFAETLDGTPPILVVGDWLPRAMG----QFLE 121 (495)
T ss_pred ----------------ccc-ccCCCCCCceEEEEehhhhhhcchHHHHHHHHHhcCCCceEEEEeecCcccc----hhhh
Confidence 565 9999999999999999999999999999999999998899999999888766 3444
Q ss_pred cccCCCCeEEEEccCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEECCCChHHHHHHHHHhcCCcEE
Q 002909 357 PIYDTKHSHILRIPFKTEQAILPQWVSRFDIYPYLGRFAQDATAKILDLMEGKPDLIIGNYSDGNLVASLMASKLGITQA 436 (867)
Q Consensus 357 ~i~~~~~v~I~rvp~~~~~~~l~~~isr~~i~p~l~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~l~a~lla~~~gip~V 436 (867)
...+..+++|+++|+. ++.+|+ +.+|+++..|+ .+..++.+.+++ ||++|.+++++++.+.+++.+.|++.+
T Consensus 122 ~~~~~~~~~il~~~~~----~~~k~~--~~~d~~i~d~~-~~~~~l~~~~~~-p~~~~~i~~~~h~~~~lla~r~g~~~~ 193 (495)
T KOG0853|consen 122 QVAGCAYLRILRIPFG----ILFKWA--EKVDPIIEDFV-SACVPLLKQLSG-PDVIIKIYFYCHFPDSLLAKRLGVLKV 193 (495)
T ss_pred hhhccceeEEEEeccc----hhhhhh--hhhceeecchH-HHHHHHHHHhcC-CcccceeEEeccchHHHhccccCccce
Confidence 5556679999999983 445676 78899999998 667778887766 999999999999999999999999999
Q ss_pred EEEcCCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHHHHhhcCCCCCcccccccccccc-ceeeecc
Q 002909 437 TIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQEIAGSKDRPGQYESHTAFTMPG-LCRVVSG 515 (867)
Q Consensus 437 ~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~-l~~v~~G 515 (867)
++.|.+...++...+.+|+.+...|++.++|.++.+.++++| ++++++++++.....++|+++..+++|. .++.+++
T Consensus 194 l~~~~l~~~e~e~~~~~~~~~~ns~~~~~~f~~~~~~L~~~d--~~~~y~ei~~s~~~~~~~~~~~~~~~~~r~~~~v~~ 271 (495)
T KOG0853|consen 194 LYRHALDKIEEETTGLAWKILVNSYFTKRQFKATFVSLSNSD--ITSTYPEIDGSWFTYGQYESHLELRLPVRLYRGVSG 271 (495)
T ss_pred eehhhhhhhhhhhhhccceEecchhhhhhhhhhhhhhcCCCC--cceeeccccchhccccccccchhcccccceeeeecc
Confidence 999999999999999999999999999999999999999999 9999999999999999999999999887 6666666
Q ss_pred CCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccccccccccCCCCcEEEEEeccCCcCChHHHHHH
Q 002909 516 INVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHIGYLADRKKPIIFSMARLDTVKNITGLTEW 595 (867)
Q Consensus 516 I~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA 595 (867)
++++.++++++++|-|.+.+.+ +
T Consensus 272 ~d~~~~siN~~~pgkd~~l~l~---------------------------------------------------------a 294 (495)
T KOG0853|consen 272 IDRFFPSINRFEPGKDQDLALP---------------------------------------------------------A 294 (495)
T ss_pred cceEeeeeeecCCCCCceeehh---------------------------------------------------------h
Confidence 6666666666666666555444 3
Q ss_pred HHHhHcc-----CCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEE-EcccccCCCChHHHHHHHHccCc
Q 002909 596 YGKNKRL-----RNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFR-WIAAQTDRYRNGELYRCIADTKG 669 (867)
Q Consensus 596 ~~~l~~~-----~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~-flG~~~d~v~~~el~~~la~~aD 669 (867)
+..+... .++.+++++|+.. +.+.++|+.+++++|+++++++++.++++ |+...+ ..+-|++++++-.
T Consensus 295 ~~~~~~~i~~~~~~~~hl~~~g~~G--~d~~~sen~~~~~el~~lie~~~l~g~~v~~~~s~~----~~~~yrl~adt~~ 368 (495)
T KOG0853|consen 295 FTLLHDSIPEPSISSEHLVVAGSRG--YDERDSENVEYLKELLSLIEEYDLLGQFVWFLPSTT----RVAKYRLAADTKG 368 (495)
T ss_pred HHhhhcccCCCCCCceEEEEecCCC--ccccchhhHHHHHHHHHHHHHhCccCceEEEecCCc----hHHHHHHHHhcce
Confidence 3333322 2467788877331 45789999999999999999999965555 546433 3456999999777
Q ss_pred EEEEcCCCCCCCHHHHHHHHcCCCEEecCCCCccceeecCceEEEeCCCCHH---HHHHHHHHHHHHhhcCHHHHHHHHH
Q 002909 670 AFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDPNNGD---ESSNKIADFFEKCKTDAGYWNQMSA 746 (867)
Q Consensus 670 vfV~PS~~EgfGltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~p~d~e---~lA~aI~~ll~~~~~dp~~~~~m~~ 746 (867)
+|++|+. |+||++++|||+||+|||||+.||+.|+|.++.+|++++| +.+ .+|+++.++. .||++|.+|++
T Consensus 369 v~~qPa~-E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~~~tG~l~dp-~~e~~~~~a~~~~kl~----~~p~l~~~~~~ 442 (495)
T KOG0853|consen 369 VLYQPAN-EHFGIVPIEAMACGLPVVATNNGGPAEIVVHGVTGLLIDP-GQEAVAELADALLKLR----RDPELWARMGK 442 (495)
T ss_pred EEecCCC-CCccceeHHHHhcCCCEEEecCCCceEEEEcCCcceeeCC-chHHHHHHHHHHHHHh----cCHHHHHHHHH
Confidence 8899988 9999999999999999999999999999999999999999 444 4666665555 99999999999
Q ss_pred HHHHHHHHhCCHHHHHHHHHHHHhHHHHHHHhhccchHHHHHHHHHHHHhhhh
Q 002909 747 AGRQRIYECYTWKIYANKVLNMGSIYGFWRQINKEPKLAKQRYIQMFYSLLFR 799 (867)
Q Consensus 747 ~ar~~v~~~ysw~~~a~~ll~ly~~~~f~~~~~~~~~~~~~~yle~~~~L~~r 799 (867)
+|+++|++.|||+.+.+++.++...|.+|+...........+|+.+|+.+.++
T Consensus 443 ~G~~rV~e~fs~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (495)
T KOG0853|consen 443 NGLKRVKEMFSWQHYSERIASVLGKYLQWEKVSSLDSLEDRRYISLFYALSFR 495 (495)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhHhcCCcccccccccccccccHHHHHHhhcC
Confidence 99999999999999999999999999999999999999999999999988764
No 6
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=100.00 E-value=4.6e-50 Score=462.53 Aligned_cols=426 Identities=30% Similarity=0.523 Sum_probs=315.6
Q ss_pred ceEEEEccCccCCccc-ccCC-CCcccchhHhHHHHHHHHHHHHHHHHHCCC--ceeeccEEEecCCCCCC-CCCCCCcc
Q 002909 281 FNVVIFSPHGYFGQAD-VLGL-PDTGGQVVYILDQVRALEEELLLRIKQQGL--SVKPQILVVTRLIPNSK-GTKCSQEL 355 (867)
Q Consensus 281 ~rI~ivs~hg~p~~~~-vlG~-pdtGG~~vyvld~araL~~eLa~~L~~~Gh--eV~~~V~VvT~~~~~~~-g~~~~~~~ 355 (867)
+||+++|+||+++|.+ ++|. |+.||+++|+. +|+++|+++|| +|+ |+|+..+... ++.+....
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~p~~GG~~~~v~--------~La~~L~~~G~~~~V~----v~t~~~~~~~~~~~~~~~~ 68 (439)
T TIGR02472 1 LYLLLLSLHGLIRGHDLELGRDADTGGQTKYVL--------ELARALARRSEVEQVD----LVTRLIKDAKVSPDYAQPI 68 (439)
T ss_pred CeEEEEeCCcCCCCCccccCCCCCCCCcchHHH--------HHHHHHHhCCCCcEEE----EEeccccCcCCCCccCCCe
Confidence 4899999999999999 6775 99999999999 56668888997 899 9998654321 12232233
Q ss_pred ccccCCCCeEEEEccCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEECCCChHHHHHHHHHhcCCcE
Q 002909 356 EPIYDTKHSHILRIPFKTEQAILPQWVSRFDIYPYLGRFAQDATAKILDLMEGKPDLIIGNYSDGNLVASLMASKLGITQ 435 (867)
Q Consensus 356 e~i~~~~~v~I~rvp~~~~~~~l~~~isr~~i~p~l~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~l~a~lla~~~gip~ 435 (867)
+.+ .+|+.++|+|+... .|.+....++++..|...+.+.+.+. ..+|||||+|++.+++++.++++..++|+
T Consensus 69 ~~~--~~gv~v~r~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~DvIH~h~~~~~~~~~~~~~~~~~p~ 140 (439)
T TIGR02472 69 ERI--APGARIVRLPFGPR-----RYLRKELLWPYLDELADNLLQHLRQQ-GHLPDLIHAHYADAGYVGARLSRLLGVPL 140 (439)
T ss_pred eEe--CCCcEEEEecCCCC-----CCcChhhhhhhHHHHHHHHHHHHHHc-CCCCCEEEEcchhHHHHHHHHHHHhCCCE
Confidence 222 35899999997642 23445667888888887777766543 24799999999888889999999999999
Q ss_pred EEEEcCCccccc---ccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHHHHhhcCCCCCccccccccccccceee
Q 002909 436 ATIAHALEKSKY---EDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRV 512 (867)
Q Consensus 436 V~t~H~l~~~~~---~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v 512 (867)
|+|.|+...... ...+..+..+...|.+......+..+++.+|.||++|.+++... | ..
T Consensus 141 V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~------~------------~~ 202 (439)
T TIGR02472 141 IFTGHSLGREKRRRLLAAGLKPQQIEKQYNISRRIEAEEETLAHASLVITSTHQEIEEQ------Y------------AL 202 (439)
T ss_pred EEecccccchhhhhcccCCCChhhhhhhcchHHHHHHHHHHHHhCCEEEECCHHHHHHH------H------------Hh
Confidence 999998643321 11111222233334444454557778999999999997654311 1 11
Q ss_pred eccCCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccccccccccCCCCcEEEEEeccCCcCChHHH
Q 002909 513 VSGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHIGYLADRKKPIIFSMARLDTVKNITGL 592 (867)
Q Consensus 513 ~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~lGll~~~~k~iIl~vGRL~~~Kgid~L 592 (867)
..|++ ..|+.+||||+|.+.|.|........ .+...+ ..++. .+++++|+++||+.+.||++.|
T Consensus 203 ~~~~~--~~ki~vIpnGvd~~~f~~~~~~~~~~-----~~~~~~-------~~~~~--~~~~~~i~~vGrl~~~Kg~~~l 266 (439)
T TIGR02472 203 YDSYQ--PERMQVIPPGVDLSRFYPPQSSEETS-----EIDNLL-------APFLK--DPEKPPILAISRPDRRKNIPSL 266 (439)
T ss_pred ccCCC--ccceEEECCCcChhhcCCCCccccch-----hHHHHH-------Hhhcc--ccCCcEEEEEcCCcccCCHHHH
Confidence 11334 67999999999999887753221100 000000 12233 5567899999999999999999
Q ss_pred HHHHHHhHccCCCeEEE-EEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccccCCCChHHHHHHHHcc---C
Q 002909 593 TEWYGKNKRLRNMVNLV-VVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTDRYRNGELYRCIADT---K 668 (867)
Q Consensus 593 ieA~~~l~~~~~~v~Lv-IVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d~v~~~el~~~la~~---a 668 (867)
++|++.+.+..+..+++ |+|++++. ..-..+..++.+++..+++++++.++|+|+|+ ++.+++..+|+.+ +
T Consensus 267 i~A~~~l~~~~~~~~l~li~G~g~~~-~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g~----~~~~~~~~~~~~a~~~~ 341 (439)
T TIGR02472 267 VEAYGRSPKLQEMANLVLVLGCRDDI-RKMESQQREVLQKVLLLIDRYDLYGKVAYPKH----HRPDDVPELYRLAARSR 341 (439)
T ss_pred HHHHHhChhhhhhccEEEEeCCcccc-ccccHHHHHHHHHHHHHHHHcCCCceEEecCC----CCHHHHHHHHHHHhhcC
Confidence 99998754333334554 55766541 11111223455667888999999999999995 4456788877752 3
Q ss_pred cEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCCccceeecCceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHH
Q 002909 669 GAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAG 748 (867)
Q Consensus 669 DvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~a 748 (867)
|+||+||.+|+||++++|||+||+|||+|+.||+.|++.++.+|++++++|+++++++|.+++ +|++.+++|+++|
T Consensus 342 Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~ll----~~~~~~~~~~~~a 417 (439)
T TIGR02472 342 GIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDAL----SDSSQWQLWSRNG 417 (439)
T ss_pred CEEecccccCCcccHHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999988 8999999999999
Q ss_pred HHHHHHhCCHHHHHHHHHHHH
Q 002909 749 RQRIYECYTWKIYANKVLNMG 769 (867)
Q Consensus 749 r~~v~~~ysw~~~a~~ll~ly 769 (867)
++++.++|||+.++++|+++.
T Consensus 418 ~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 418 IEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred HHHHHHhCCHHHHHHHHHHHh
Confidence 999999999999999999864
No 7
>PRK00654 glgA glycogen synthase; Provisional
Probab=100.00 E-value=2.6e-43 Score=409.26 Aligned_cols=426 Identities=18% Similarity=0.198 Sum_probs=288.2
Q ss_pred ceEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCCCCCCCCCCC-Cccccc-
Q 002909 281 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLIPNSKGTKCS-QELEPI- 358 (867)
Q Consensus 281 ~rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~~~~~g~~~~-~~~e~i- 358 (867)
|||++||.+.+|. ..+||...+|. .|+++|+++||+|. |+|+..+........ .....+
T Consensus 1 m~i~~vs~e~~P~-------~k~GGl~~~v~--------~L~~~L~~~G~~V~----v~~p~y~~~~~~~~~~~~~~~~~ 61 (466)
T PRK00654 1 MKILFVASECAPL-------IKTGGLGDVVG--------ALPKALAALGHDVR----VLLPGYPAIREKLRDAQVVGRLD 61 (466)
T ss_pred CeEEEEEcccccC-------cccCcHHHHHH--------HHHHHHHHCCCcEE----EEecCCcchhhhhcCceEEEEee
Confidence 7999999999872 13899999998 66668888999999 999875432110000 000000
Q ss_pred --------cCCCCeEEEEccCCCcccccccccccccchhhH---HH---HHHHHHHHHHHHcCCCCeEEEECCCChHHHH
Q 002909 359 --------YDTKHSHILRIPFKTEQAILPQWVSRFDIYPYL---GR---FAQDATAKILDLMEGKPDLIIGNYSDGNLVA 424 (867)
Q Consensus 359 --------~~~~~v~I~rvp~~~~~~~l~~~isr~~i~p~l---~~---f~~~~~~~i~~~l~~kPDIIh~h~~~~~l~a 424 (867)
...+|+++++++... +..+..++.+. .+ |...+...+ ..+..+|||||+|.|.+++++
T Consensus 62 ~~~~~~~~~~~~gv~v~~v~~~~-------~~~~~~~y~~~d~~~r~~~f~~~~~~~~-~~~~~~pDiiH~h~w~~~~~~ 133 (466)
T PRK00654 62 LFTVLFGHLEGDGVPVYLIDAPH-------LFDRPSGYGYPDNGERFAFFSWAAAEFA-EGLDPRPDIVHAHDWHTGLIP 133 (466)
T ss_pred eEEEEEEeEEcCCceEEEEeCHH-------HcCCCCCCCCcChHHHHHHHHHHHHHHH-HhcCCCCceEEECCcHHHHHH
Confidence 012467777776422 11222233322 12 333334333 344569999999999999998
Q ss_pred HHHHHhc-----CCcEEEEEcCCcccccccc------hhhhhhc-CccccchhhhhHHHHHHhcCCEEEecCHHHHhhcC
Q 002909 425 SLMASKL-----GITQATIAHALEKSKYEDS------DAKWKEL-DPKYHFSCQFTADLIAMNQTDFIITSTYQEIAGSK 492 (867)
Q Consensus 425 ~lla~~~-----gip~V~t~H~l~~~~~~~s------~~~~~~~-~~~y~f~~~~~~e~ial~~aD~IIa~S~~~~~~~k 492 (867)
.++++.. ++|+|+|+|++........ ++.+..+ ...+.+...+...+.++..||.|+|+|+..++.+.
T Consensus 134 ~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~ei~ 213 (466)
T PRK00654 134 ALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYADRVTTVSPTYAREIT 213 (466)
T ss_pred HHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHhcCcCeeeCHHHHHHhc
Confidence 8888663 7999999999865432110 0101000 00011111122234478999999999998776544
Q ss_pred CCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccccccccccCC
Q 002909 493 DRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHIGYLADR 572 (867)
Q Consensus 493 ~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~lGll~~~ 572 (867)
.... ++.+.+++ +.+ ..|+.+|+||||.+.|.|.++.......-...++....++...++++|+. ++
T Consensus 214 ~~~~------~~gl~~~~----~~~--~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~-~~ 280 (466)
T PRK00654 214 TPEF------GYGLEGLL----RAR--SGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAENKRALQERFGLP-DD 280 (466)
T ss_pred cccC------CcChHHHH----Hhc--ccCceEecCCCCccccCCccCcccccccChhhhhchHHHHHHHHHHhCCC-CC
Confidence 3210 01110000 112 56899999999999998865421110000011111222333445678873 24
Q ss_pred CCcEEEEEeccCCcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEE-cccc
Q 002909 573 KKPIIFSMARLDTVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRW-IAAQ 651 (867)
Q Consensus 573 ~k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~f-lG~~ 651 (867)
+.++|+++||+.++||++.|++|+.++.+. +++|+|+|+|.. .+.+.+++++++++ +++.+ .|+
T Consensus 281 ~~~~i~~vGRl~~~KG~~~li~a~~~l~~~--~~~lvivG~g~~----------~~~~~l~~l~~~~~--~~v~~~~g~- 345 (466)
T PRK00654 281 DAPLFAMVSRLTEQKGLDLVLEALPELLEQ--GGQLVLLGTGDP----------ELEEAFRALAARYP--GKVGVQIGY- 345 (466)
T ss_pred CCcEEEEeeccccccChHHHHHHHHHHHhc--CCEEEEEecCcH----------HHHHHHHHHHHHCC--CcEEEEEeC-
Confidence 689999999999999999999999998753 799999999854 34567888888886 45654 553
Q ss_pred cCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCCccceeecC------ceEEEeCCCCHHHHHH
Q 002909 652 TDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIIDG------VSGFHIDPNNGDESSN 725 (867)
Q Consensus 652 ~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG~~EiI~dg------~~G~lv~p~d~e~lA~ 725 (867)
+.+.+..+++. ||+||+||.+|+||++++|||+||+|+|+|+.||+.|+|.++ .+|++++++|++++++
T Consensus 346 ----~~~~~~~~~~~-aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~ 420 (466)
T PRK00654 346 ----DEALAHRIYAG-ADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLR 420 (466)
T ss_pred ----CHHHHHHHHhh-CCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEeCCCCHHHHHH
Confidence 22334456665 999999999999999999999999999999999999999988 8999999999999999
Q ss_pred HHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Q 002909 726 KIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKVLNMGS 770 (867)
Q Consensus 726 aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll~ly~ 770 (867)
+|.++++.. .|++.+.+|++++++ ++|||+.++++|+++|+
T Consensus 421 ~i~~~l~~~-~~~~~~~~~~~~~~~---~~fsw~~~a~~~~~lY~ 461 (466)
T PRK00654 421 ALRRALELY-RQPPLWRALQRQAMA---QDFSWDKSAEEYLELYR 461 (466)
T ss_pred HHHHHHHHh-cCHHHHHHHHHHHhc---cCCChHHHHHHHHHHHH
Confidence 999887422 477778999988863 78999999999999764
No 8
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=100.00 E-value=1.4e-42 Score=394.86 Aligned_cols=398 Identities=21% Similarity=0.286 Sum_probs=296.3
Q ss_pred EEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCCCCCCCCCCCCccccccCCC
Q 002909 283 VVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLIPNSKGTKCSQELEPIYDTK 362 (867)
Q Consensus 283 I~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~~~~~g~~~~~~~e~i~~~~ 362 (867)
|++++.|..|.. +++..+.||.++|+. +|+++|.++||+|+ |+|+......+ .. ....+
T Consensus 1 ~~~~~~~~~~~~--~~~~~~~GG~e~~v~--------~la~~L~~~G~~V~----v~~~~~~~~~~-----~~--~~~~~ 59 (405)
T TIGR03449 1 VAMISMHTSPLQ--QPGTGDAGGMNVYIL--------ETATELARRGIEVD----IFTRATRPSQP-----PV--VEVAP 59 (405)
T ss_pred CeEEeccCCccc--cCCCcCCCCceehHH--------HHHHHHhhCCCEEE----EEecccCCCCC-----Cc--cccCC
Confidence 678899998743 445555799999999 67778888999999 99975332111 11 11234
Q ss_pred CeEEEEccCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEECCCChHHHHHHHHHhcCCcEEEEEcCC
Q 002909 363 HSHILRIPFKTEQAILPQWVSRFDIYPYLGRFAQDATAKILDLMEGKPDLIIGNYSDGNLVASLMASKLGITQATIAHAL 442 (867)
Q Consensus 363 ~v~I~rvp~~~~~~~l~~~isr~~i~p~l~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~l~a~lla~~~gip~V~t~H~l 442 (867)
++++.+++.....+ .....+..+...|...+.+.+......+|||||+|.+.+++.+.++++..++|+|+|.|+.
T Consensus 60 ~~~v~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Diih~h~~~~~~~~~~~~~~~~~p~v~t~h~~ 134 (405)
T TIGR03449 60 GVRVRNVVAGPYEG-----LDKEDLPTQLCAFTGGVLRAEARHEPGYYDLIHSHYWLSGQVGWLLRDRWGVPLVHTAHTL 134 (405)
T ss_pred CcEEEEecCCCccc-----CCHHHHHHHHHHHHHHHHHHHhhccCCCCCeEEechHHHHHHHHHHHHhcCCCEEEeccch
Confidence 78888887544321 1111222223344444444444433468999999998888888888888999999999986
Q ss_pred cccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHHHHhhcCCCCCccccccccccccceeeeccCCCCCCc
Q 002909 443 EKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPK 522 (867)
Q Consensus 443 ~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~k 522 (867)
...+. .++...... ........+...++.+|.|+++|+...+.+... .|++ ..+
T Consensus 135 ~~~~~----~~~~~~~~~-~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~~~-------------------~~~~--~~k 188 (405)
T TIGR03449 135 AAVKN----AALADGDTP-EPEARRIGEQQLVDNADRLIANTDEEARDLVRH-------------------YDAD--PDR 188 (405)
T ss_pred HHHHH----HhccCCCCC-chHHHHHHHHHHHHhcCeEEECCHHHHHHHHHH-------------------cCCC--hhh
Confidence 53221 011000000 001122234557899999999998766532211 1233 578
Q ss_pred EEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccccccccccCCCCcEEEEEeccCCcCChHHHHHHHHHhHcc
Q 002909 523 FNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHIGYLADRKKPIIFSMARLDTVKNITGLTEWYGKNKRL 602 (867)
Q Consensus 523 i~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~~ 602 (867)
+.+||||+|.+.|.|......+ .++|+ ++++++|+++||+.+.||++.+++|+..+.+.
T Consensus 189 i~vi~ngvd~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~G~l~~~K~~~~li~a~~~l~~~ 247 (405)
T TIGR03449 189 IDVVAPGADLERFRPGDRATER-------------------ARLGL--PLDTKVVAFVGRIQPLKAPDVLLRAVAELLDR 247 (405)
T ss_pred EEEECCCcCHHHcCCCcHHHHH-------------------HhcCC--CCCCcEEEEecCCCcccCHHHHHHHHHHHHhh
Confidence 9999999999888765322211 34565 56788999999999999999999999999776
Q ss_pred CCC--eEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCC
Q 002909 603 RNM--VNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAF 680 (867)
Q Consensus 603 ~~~--v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~Egf 680 (867)
.++ ++|+|+|++... ...+.+.++++++++++.++|+|+|+ ++.+++..+++. ||++|+||..|+|
T Consensus 248 ~~~~~~~l~ivG~~~~~-------g~~~~~~l~~~~~~~~l~~~v~~~g~----~~~~~~~~~l~~-ad~~v~ps~~E~~ 315 (405)
T TIGR03449 248 DPDRNLRVIVVGGPSGS-------GLATPDALIELAAELGIADRVRFLPP----RPPEELVHVYRA-ADVVAVPSYNESF 315 (405)
T ss_pred CCCcceEEEEEeCCCCC-------cchHHHHHHHHHHHcCCCceEEECCC----CCHHHHHHHHHh-CCEEEECCCCCCc
Confidence 666 999999975320 11234678888999999999999995 556789999997 9999999999999
Q ss_pred CHHHHHHHHcCCCEEecCCCCccceeecCceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHH
Q 002909 681 GLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKI 760 (867)
Q Consensus 681 GltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~ 760 (867)
|++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++ +|++.+++|++++++.+ ++|||+.
T Consensus 316 g~~~lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l----~~~~~~~~~~~~~~~~~-~~fsw~~ 390 (405)
T TIGR03449 316 GLVAMEAQACGTPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLL----DDPRTRIRMGAAAVEHA-AGFSWAA 390 (405)
T ss_pred ChHHHHHHHcCCCEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH-HhCCHHH
Confidence 999999999999999999999999999999999999999999999999988 89999999999999987 7899999
Q ss_pred HHHHHHHHHh
Q 002909 761 YANKVLNMGS 770 (867)
Q Consensus 761 ~a~~ll~ly~ 770 (867)
++++++++|.
T Consensus 391 ~~~~~~~~y~ 400 (405)
T TIGR03449 391 TADGLLSSYR 400 (405)
T ss_pred HHHHHHHHHH
Confidence 9999999664
No 9
>PLN02939 transferase, transferring glycosyl groups
Probab=100.00 E-value=4.1e-42 Score=409.97 Aligned_cols=458 Identities=15% Similarity=0.161 Sum_probs=312.5
Q ss_pred HHHhhcCCChhhHHHHHh--cCC--CcceEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCcee
Q 002909 258 FSEALQAPDAAKLQVLFS--RLP--NMFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVK 333 (867)
Q Consensus 258 ~~~~~~~p~~~~l~~f~~--r~p--m~~rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~ 333 (867)
-.++.+.+|...+..|+. +.| ..|||++||.-..|. ..+||..-++- .|.++|+++||+|.
T Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~mkILfVasE~aP~-------aKtGGLaDVv~--------sLPkAL~~~GhdV~ 519 (977)
T PLN02939 455 YLSCKGKNEREAVENFLKLTLSGTSSGLHIVHIAAEMAPV-------AKVGGLADVVS--------GLGKALQKKGHLVE 519 (977)
T ss_pred HHHHhcCchHHHHHHHHHhccCCCCCCCEEEEEEcccccc-------cccccHHHHHH--------HHHHHHHHcCCeEE
Confidence 356677888888888776 222 469999999988872 24899988887 56667888999999
Q ss_pred eccEEEecCCCCCCCCCCC-Cc-----cc-cccC-----------CCCeEEEEccCCCcccccccccccccchhh---HH
Q 002909 334 PQILVVTRLIPNSKGTKCS-QE-----LE-PIYD-----------TKHSHILRIPFKTEQAILPQWVSRFDIYPY---LG 392 (867)
Q Consensus 334 ~~V~VvT~~~~~~~g~~~~-~~-----~e-~i~~-----------~~~v~I~rvp~~~~~~~l~~~isr~~i~p~---l~ 392 (867)
|+++.+..-...... .+ .. .+.+ .+|+.++.+...... .+..+..++.+ ..
T Consensus 520 ----VIlP~Y~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~GV~vyfId~~~~~----~fF~R~~iYg~~Dn~~ 591 (977)
T PLN02939 520 ----IVLPKYDCMQYDQIRNLKVLDVVVESYFDGNLFKNKIWTGTVEGLPVYFIEPQHPS----KFFWRAQYYGEHDDFK 591 (977)
T ss_pred ----EEeCCCcccChhhhhcccccceEEEEeecCceeEEEEEEEEECCeeEEEEecCCch----hccCCCCCCCCccHHH
Confidence 999976532100000 00 00 0000 012333322110000 02223333322 12
Q ss_pred H--HHHHHHHHHHHHcCCCCeEEEECCCChHHHHHHHHH------hcCCcEEEEEcCCcccccccc------hhhhhhcC
Q 002909 393 R--FAQDATAKILDLMEGKPDLIIGNYSDGNLVASLMAS------KLGITQATIAHALEKSKYEDS------DAKWKELD 458 (867)
Q Consensus 393 ~--f~~~~~~~i~~~l~~kPDIIh~h~~~~~l~a~lla~------~~gip~V~t~H~l~~~~~~~s------~~~~~~~~ 458 (867)
+ |+..+.-++....+.+|||||||.|.+++++.++.+ ..++|.|+|+|++..+..... ++.+..+.
T Consensus 592 RF~~FsrAaLe~~~~~~~~PDIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~ 671 (977)
T PLN02939 592 RFSYFSRAALELLYQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQLD 671 (977)
T ss_pred HHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHcc
Confidence 2 222333333334467999999999999987554433 245789999999876653211 11111110
Q ss_pred --ccc--cchhhhhHHHHHHhcCCEEEecCHHHHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCC
Q 002909 459 --PKY--HFSCQFTADLIAMNQTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSV 534 (867)
Q Consensus 459 --~~y--~f~~~~~~e~ial~~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~ 534 (867)
..+ +|...+-.-+-.+..||.|+|+|+..++.+.... +..+.+++ .....++.+|+||||.+.
T Consensus 672 ~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~te~-------G~GL~~~L------~~~~~Kl~gIlNGID~e~ 738 (977)
T PLN02939 672 RPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRSEG-------GRGLQDTL------KFHSKKFVGILNGIDTDT 738 (977)
T ss_pred ChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHHHh-------ccchHHHh------ccccCCceEEecceehhh
Confidence 000 0111111112255679999999998877544311 11111111 112679999999999999
Q ss_pred CCCCchHhhhhccCCcchHHhhhcccccccccccccC-CCCcEEEEEeccCCcCChHHHHHHHHHhHccCCCeEEEEEeC
Q 002909 535 YFPYTEKQKRLTSFHPDIEELLYSKEDNSEHIGYLAD-RKKPIIFSMARLDTVKNITGLTEWYGKNKRLRNMVNLVVVAG 613 (867)
Q Consensus 535 f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~lGll~~-~~k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~~v~LvIVG~ 613 (867)
|.|.++.......-...++.+..++...++++|+..+ ++.|+|+++||+.++||++.+++|+..+.+ ++++|+|+|+
T Consensus 739 wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~dvqLVIvGd 816 (977)
T PLN02939 739 WNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LGGQFVLLGS 816 (977)
T ss_pred cCCccccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cCCEEEEEeC
Confidence 9997654322222233445556666677788998432 467999999999999999999999998865 4799999999
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCC
Q 002909 614 FFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLP 693 (867)
Q Consensus 614 g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlP 693 (867)
|+.+ .+.+.++.+++++++.++|.|+|... ......+|+. +|+||+||++|+||++++|||+||+|
T Consensus 817 Gp~~---------~~e~eL~~La~~l~l~drV~FlG~~d----e~lah~IYAa-ADIFLmPSr~EPfGLvqLEAMAyGtP 882 (977)
T PLN02939 817 SPVP---------HIQREFEGIADQFQSNNNIRLILKYD----EALSHSIYAA-SDMFIIPSMFEPCGLTQMIAMRYGSV 882 (977)
T ss_pred CCcH---------HHHHHHHHHHHHcCCCCeEEEEeccC----HHHHHHHHHh-CCEEEECCCccCCcHHHHHHHHCCCC
Confidence 9651 34567888999999999999999533 3445667776 99999999999999999999999999
Q ss_pred EEecCCCCccceeec---------CceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHH
Q 002909 694 TFATNQGGPAEIIID---------GVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANK 764 (867)
Q Consensus 694 VIat~~gG~~EiI~d---------g~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ 764 (867)
+|++++||..|+|.+ +.+||+++++|+++++++|.+++..+..|++.|++|+++++ .+.|||+.++++
T Consensus 883 PVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~am---~~dFSWe~~A~q 959 (977)
T PLN02939 883 PIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKDM---NIDFSWDSSASQ 959 (977)
T ss_pred EEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHH---HhcCCHHHHHHH
Confidence 999999999999976 57999999999999999999988666678999999998775 378999999999
Q ss_pred HHHHHh
Q 002909 765 VLNMGS 770 (867)
Q Consensus 765 ll~ly~ 770 (867)
|+++|.
T Consensus 960 YeeLY~ 965 (977)
T PLN02939 960 YEELYQ 965 (977)
T ss_pred HHHHHH
Confidence 999654
No 10
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=100.00 E-value=1e-41 Score=396.74 Aligned_cols=433 Identities=17% Similarity=0.171 Sum_probs=293.5
Q ss_pred ceEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCCCCCCCCCCCCc-----c
Q 002909 281 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLIPNSKGTKCSQE-----L 355 (867)
Q Consensus 281 ~rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~~~~~g~~~~~~-----~ 355 (867)
|||++||...+|. -.+||+..++. .|+++|+++||+|. |+++..+.......... .
T Consensus 1 m~i~~vs~E~~P~-------~k~GGl~~~v~--------~L~~aL~~~G~~v~----v~~p~y~~~~~~~~~~~~~~~~~ 61 (473)
T TIGR02095 1 MRVLFVAAEMAPF-------AKTGGLADVVG--------ALPKALAALGHDVR----VLLPAYGCIEDEVDDQVKVVELV 61 (473)
T ss_pred CeEEEEEeccccc-------cCcCcHHHHHH--------HHHHHHHHcCCeEE----EEecCCcChhhhhccCeEEEEEE
Confidence 7999999998872 14899999998 56667788999999 99987643211100000 0
Q ss_pred c--------c----ccCCCCeEEEEccCCCccccccc---ccc--cccchhhHHHHHHHHHHHHHHHcCCCCeEEEECCC
Q 002909 356 E--------P----IYDTKHSHILRIPFKTEQAILPQ---WVS--RFDIYPYLGRFAQDATAKILDLMEGKPDLIIGNYS 418 (867)
Q Consensus 356 e--------~----i~~~~~v~I~rvp~~~~~~~l~~---~is--r~~i~p~l~~f~~~~~~~i~~~l~~kPDIIh~h~~ 418 (867)
. . ....+++.++++.... ++.+ ... ..+.......|...+...+.+ .+.+|||||+|.|
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~v~~~~i~~~~---~~~r~~~~y~~~~~d~~~r~~~f~~a~~~~~~~-~~~~~DiiH~hdw 137 (473)
T TIGR02095 62 DLSVGPRTLYVKVFEGVVEGVPVYFIDNPS---LFDRPGGIYGDDYPDNAERFAFFSRAAAELLSG-LGWQPDVVHAHDW 137 (473)
T ss_pred EEeecCceeEEEEEEEEECCceEEEEECHH---HcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHh-cCCCCCEEEECCc
Confidence 0 0 0112345555554221 0000 000 001111122344444444443 4579999999999
Q ss_pred ChHHHHHHHHHhcC---CcEEEEEcCCcccccccch-hhh-----hhcC-ccccchhhhhHHHHHHhcCCEEEecCHHHH
Q 002909 419 DGNLVASLMASKLG---ITQATIAHALEKSKYEDSD-AKW-----KELD-PKYHFSCQFTADLIAMNQTDFIITSTYQEI 488 (867)
Q Consensus 419 ~~~l~a~lla~~~g---ip~V~t~H~l~~~~~~~s~-~~~-----~~~~-~~y~f~~~~~~e~ial~~aD~IIa~S~~~~ 488 (867)
.+++++.+++...+ +|+|+|+|++......... ..+ ..+. ..+.+...+...+.++..||.|+++|+..+
T Consensus 138 ~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v~tVS~~~~ 217 (473)
T TIGR02095 138 HTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADRVTTVSPTYA 217 (473)
T ss_pred HHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHHhCCcCeecCHhHH
Confidence 99999998888776 9999999998654321111 100 0000 001111122234557899999999999876
Q ss_pred hhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhccccccccccc
Q 002909 489 AGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHIGY 568 (867)
Q Consensus 489 ~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~lGl 568 (867)
+.+..... ++.+.+.. .....++.+|+||+|.+.|.|..+.......-....+....++...++++|+
T Consensus 218 ~ei~~~~~------~~~l~~~l------~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl 285 (473)
T TIGR02095 218 REILTPEF------GYGLDGVL------KARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKEALQEELGL 285 (473)
T ss_pred HHhcCCcC------CccchhHH------HhcCCCeEEEeCCCCccccCCCCCcccccCcCccchhhhhhhHHHHHHHcCC
Confidence 65443210 01111000 0115689999999999999886432111000001111222233444577888
Q ss_pred ccCCCCcEEEEEeccCCcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEc
Q 002909 569 LADRKKPIIFSMARLDTVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWI 648 (867)
Q Consensus 569 l~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~fl 648 (867)
..++++++|+++||+.++||++.+++|+.++.+. +++|+|+|+|.. .+.+.+++++++++ +++.+.
T Consensus 286 ~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~--~~~lvi~G~g~~----------~~~~~l~~~~~~~~--~~v~~~ 351 (473)
T TIGR02095 286 PVDDDVPLFGVISRLTQQKGVDLLLAALPELLEL--GGQLVVLGTGDP----------ELEEALRELAERYP--GNVRVI 351 (473)
T ss_pred CccCCCCEEEEEecCccccChHHHHHHHHHHHHc--CcEEEEECCCCH----------HHHHHHHHHHHHCC--CcEEEE
Confidence 5445889999999999999999999999999753 599999999853 34567777777764 678887
Q ss_pred ccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCCccceeecC------ceEEEeCCCCHHH
Q 002909 649 AAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIIDG------VSGFHIDPNNGDE 722 (867)
Q Consensus 649 G~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG~~EiI~dg------~~G~lv~p~d~e~ 722 (867)
+. .+.+++..+++. ||++++||.+|+||++++|||+||+|||+|+.||..|+|.++ .+|++++++|+++
T Consensus 352 ~~----~~~~~~~~~~~~-aDv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~ 426 (473)
T TIGR02095 352 IG----YDEALAHLIYAG-ADFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYDPGA 426 (473)
T ss_pred Ec----CCHHHHHHHHHh-CCEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEeCCCCHHH
Confidence 73 344566677776 999999999999999999999999999999999999999998 8999999999999
Q ss_pred HHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Q 002909 723 SSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKVLNMGS 770 (867)
Q Consensus 723 lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll~ly~ 770 (867)
++++|.+++....+|++.|++|++++++ ++|||+.++++|+++|+
T Consensus 427 la~~i~~~l~~~~~~~~~~~~~~~~~~~---~~fsw~~~a~~~~~~Y~ 471 (473)
T TIGR02095 427 LLAALSRALRLYRQDPSLWEALQKNAMS---QDFSWDKSAKQYVELYR 471 (473)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHhc---cCCCcHHHHHHHHHHHH
Confidence 9999999885544599999999998863 68999999999999765
No 11
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=100.00 E-value=8e-41 Score=376.59 Aligned_cols=397 Identities=31% Similarity=0.487 Sum_probs=301.6
Q ss_pred eEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCCCCCCCCCCCCccccccCC
Q 002909 282 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLIPNSKGTKCSQELEPIYDT 361 (867)
Q Consensus 282 rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~~~~~g~~~~~~~e~i~~~ 361 (867)
||+|++.|+.|. .-.|.|+.||.++++. +|++.|+++||+|+ |+|...+.... .. ....
T Consensus 1 ~~~~~~~~~~~~--~~~~~~~~GG~~~~~~--------~l~~~L~~~g~~V~----v~~~~~~~~~~-----~~--~~~~ 59 (398)
T cd03800 1 RIALISLHGSPL--AQPGGADTGGQNVYVL--------ELARALARLGHEVD----IFTRRIDDALP-----PI--VELA 59 (398)
T ss_pred CeEEEecccccc--ccCCCCCCCceeehHH--------HHHHHHhccCceEE----EEEecCCcccC-----Cc--cccc
Confidence 588999887662 2245688999999999 56667788999999 99874332111 00 1123
Q ss_pred CCeEEEEccCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEECCCChHHHHHHHHHhcCCcEEEEEcC
Q 002909 362 KHSHILRIPFKTEQAILPQWVSRFDIYPYLGRFAQDATAKILDLMEGKPDLIIGNYSDGNLVASLMASKLGITQATIAHA 441 (867)
Q Consensus 362 ~~v~I~rvp~~~~~~~l~~~isr~~i~p~l~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~l~a~lla~~~gip~V~t~H~ 441 (867)
+++.+.+++..... ..++..+++++..|...+.+.+... ..+||+||+|++..+.++..+++..++|+|++.|+
T Consensus 60 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Div~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 133 (398)
T cd03800 60 PGVRVVRVPAGPAE-----YLPKEELWPYLDEFADDLLRFLRRE-GGRPDLIHAHYWDSGLVALLLARRLGIPLVHTFHS 133 (398)
T ss_pred cceEEEeccccccc-----CCChhhcchhHHHHHHHHHHHHHhc-CCCccEEEEecCccchHHHHHHhhcCCceEEEeec
Confidence 46778887764322 1223345667666777777766554 24899999999888888888899999999999998
Q ss_pred CcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHHHHhhcCCCCCccccccccccccceeeeccCCCCCC
Q 002909 442 LEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDP 521 (867)
Q Consensus 442 l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ 521 (867)
+...........|. +........+..+++.+|.|+++|......+.... +.+ ..
T Consensus 134 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~-------------------~~~--~~ 187 (398)
T cd03800 134 LGAVKRRHLGAADT-----YEPARRIEAEERLLRAADRVIASTPQEAEELYSLY-------------------GAY--PR 187 (398)
T ss_pred ccccCCcccccccc-----cchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHHHc-------------------ccc--cc
Confidence 76543221111111 11222333456688999999999987665332211 111 45
Q ss_pred cEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccccccccccCCCCcEEEEEeccCCcCChHHHHHHHHHhHc
Q 002909 522 KFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHIGYLADRKKPIIFSMARLDTVKNITGLTEWYGKNKR 601 (867)
Q Consensus 522 ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~ 601 (867)
++.+||||+|.+.|.+....... +..++. .+++++|+++||+.+.||++.+++++..+.+
T Consensus 188 ~~~vi~ng~~~~~~~~~~~~~~~------------------~~~~~~--~~~~~~i~~~gr~~~~k~~~~ll~a~~~l~~ 247 (398)
T cd03800 188 RIRVVPPGVDLERFTPYGRAEAR------------------RARLLR--DPDKPRILAVGRLDPRKGIDTLIRAYAELPE 247 (398)
T ss_pred ccEEECCCCCccceecccchhhH------------------HHhhcc--CCCCcEEEEEcccccccCHHHHHHHHHHHHH
Confidence 68999999999887665432210 022333 5577899999999999999999999999988
Q ss_pred cCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCC
Q 002909 602 LRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFG 681 (867)
Q Consensus 602 ~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfG 681 (867)
..++++|+++|++.... ...+...++.+++++++.++|.|+|+ ++.+++..+++. +|++++||..|+||
T Consensus 248 ~~~~~~l~i~G~~~~~~------~~~~~~~~~~~~~~~~~~~~v~~~g~----~~~~~~~~~~~~-adi~l~ps~~e~~~ 316 (398)
T cd03800 248 LRERANLVIVGGPRDDI------LAMDEEELRELARELGVIDRVDFPGR----VSREDLPALYRA-ADVFVNPALYEPFG 316 (398)
T ss_pred hCCCeEEEEEECCCCcc------hhhhhHHHHHHHHhcCCCceEEEecc----CCHHHHHHHHHh-CCEEEecccccccC
Confidence 78899999999986521 11223447788888999999999995 556799999997 99999999999999
Q ss_pred HHHHHHHHcCCCEEecCCCCccceeecCceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHH
Q 002909 682 LTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIY 761 (867)
Q Consensus 682 ltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~ 761 (867)
++++|||+||+|||+++.||..|++.++++|++++++|+++++++|.+++ .|++.+++|++++++.+.++|||+.+
T Consensus 317 ~~l~Ea~a~G~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~a~~~~~~~~s~~~~ 392 (398)
T cd03800 317 LTALEAMACGLPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLL----TDPALRRRLSRAGLRRARARYTWERV 392 (398)
T ss_pred cHHHHHHhcCCCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhCCHHHH
Confidence 99999999999999999999999999999999999999999999999988 89999999999999999999999999
Q ss_pred HHHHH
Q 002909 762 ANKVL 766 (867)
Q Consensus 762 a~~ll 766 (867)
+++++
T Consensus 393 ~~~~~ 397 (398)
T cd03800 393 AARLL 397 (398)
T ss_pred HHHHh
Confidence 99876
No 12
>PLN02316 synthase/transferase
Probab=100.00 E-value=8.1e-41 Score=405.81 Aligned_cols=404 Identities=15% Similarity=0.121 Sum_probs=281.5
Q ss_pred cceEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCCCCCCC-CCCCCcc-cc
Q 002909 280 MFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLIPNSKG-TKCSQEL-EP 357 (867)
Q Consensus 280 ~~rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~~~~~g-~~~~~~~-e~ 357 (867)
.|||++||.+..|- -.+||...+|. .|+++|+++||+|. |+|+.++.-.. ....... ..
T Consensus 587 pM~Il~VSsE~~P~-------aKvGGLgDVV~--------sLp~ALa~~Gh~V~----VitP~Y~~i~~~~~~~~~~~~~ 647 (1036)
T PLN02316 587 PMHIVHIAVEMAPI-------AKVGGLGDVVT--------SLSRAVQDLNHNVD----IILPKYDCLNLSHVKDLHYQRS 647 (1036)
T ss_pred CcEEEEEEcccCCC-------CCcCcHHHHHH--------HHHHHHHHcCCEEE----EEecCCcccchhhcccceEEEE
Confidence 49999999999872 14899999998 56667888999999 99997643100 0000000 00
Q ss_pred cc-----------CCCCeEEEEccCCCcccccccccccccchh------hHHHHHHHHHHHHHHHcCCCCeEEEECCCCh
Q 002909 358 IY-----------DTKHSHILRIPFKTEQAILPQWVSRFDIYP------YLGRFAQDATAKILDLMEGKPDLIIGNYSDG 420 (867)
Q Consensus 358 i~-----------~~~~v~I~rvp~~~~~~~l~~~isr~~i~p------~l~~f~~~~~~~i~~~l~~kPDIIh~h~~~~ 420 (867)
+. ..+++.++.+.... + +..+..++. ....|...++..+ ...+.+|||||+|.|.+
T Consensus 648 ~~~~~~~~~v~~~~~~GV~vyfl~~~~--~----~F~r~~~Yg~~Dd~~RF~~F~~Aale~l-~~~~~~PDIIHaHDW~t 720 (1036)
T PLN02316 648 YSWGGTEIKVWFGKVEGLSVYFLEPQN--G----MFWAGCVYGCRNDGERFGFFCHAALEFL-LQSGFHPDIIHCHDWSS 720 (1036)
T ss_pred eccCCEEEEEEEEEECCcEEEEEeccc--c----ccCCCCCCCchhHHHHHHHHHHHHHHHH-HhcCCCCCEEEECCChH
Confidence 00 01234444433110 1 122222222 1223333344433 33457999999999999
Q ss_pred HHHHHHHHHh------cCCcEEEEEcCCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHHHHhhcCCC
Q 002909 421 NLVASLMASK------LGITQATIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQEIAGSKDR 494 (867)
Q Consensus 421 ~l~a~lla~~------~gip~V~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~~~~~~k~~ 494 (867)
++++.+++.. .++|+|+|+|++.... ++ -..++..||.|+|+|+..++.+...
T Consensus 721 alva~llk~~~~~~~~~~~p~V~TiHnl~~~~---------------n~------lk~~l~~AD~ViTVS~tya~EI~~~ 779 (1036)
T PLN02316 721 APVAWLFKDHYAHYGLSKARVVFTIHNLEFGA---------------NH------IGKAMAYADKATTVSPTYSREVSGN 779 (1036)
T ss_pred HHHHHHHHHhhhhhccCCCCEEEEeCCcccch---------------hH------HHHHHHHCCEEEeCCHHHHHHHHhc
Confidence 9988888764 3589999999865321 00 1126789999999999876643321
Q ss_pred CCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcc-hHHhhhcccccccccccccCCC
Q 002909 495 PGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPD-IEELLYSKEDNSEHIGYLADRK 573 (867)
Q Consensus 495 ~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~-i~~~l~~~~~~~~~lGll~~~~ 573 (867)
.++.....|+.+|+||||.+.|.|.++.......-... ++.+..++...++++|+. .++
T Consensus 780 -------------------~~l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lGL~-~~d 839 (1036)
T PLN02316 780 -------------------SAIAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLGLK-QAD 839 (1036)
T ss_pred -------------------cCcccccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhCCC-ccc
Confidence 01111146899999999999998865432111000000 111223334455778883 247
Q ss_pred CcEEEEEeccCCcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCC--CCcEEEcccc
Q 002909 574 KPIIFSMARLDTVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQL--QGQFRWIAAQ 651 (867)
Q Consensus 574 k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L--~~~V~flG~~ 651 (867)
.|+|+++|||.++||++.|++|+..+.+ .+++|+|+|+|+++ .+.+.++++++++++ +++|.|.|..
T Consensus 840 ~plVg~VGRL~~qKGvdlLi~Al~~ll~--~~~qlVIvG~Gpd~---------~~e~~l~~La~~Lg~~~~~rV~f~g~~ 908 (1036)
T PLN02316 840 LPLVGIITRLTHQKGIHLIKHAIWRTLE--RNGQVVLLGSAPDP---------RIQNDFVNLANQLHSSHHDRARLCLTY 908 (1036)
T ss_pred CeEEEEEeccccccCHHHHHHHHHHHhh--cCcEEEEEeCCCCH---------HHHHHHHHHHHHhCccCCCeEEEEecC
Confidence 8999999999999999999999998865 47999999999651 345678888998865 6789998743
Q ss_pred cCCCChHHHH-HHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCCccceeecC-------------ceEEEeCC
Q 002909 652 TDRYRNGELY-RCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIIDG-------------VSGFHIDP 717 (867)
Q Consensus 652 ~d~v~~~el~-~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG~~EiI~dg-------------~~G~lv~p 717 (867)
. +.+. .+|+. ||+||+||++|+||++++|||+||+|+|++++||+.|+|.|+ .+||++++
T Consensus 909 d-----e~lah~iyaa-ADiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~ 982 (1036)
T PLN02316 909 D-----EPLSHLIYAG-ADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDG 982 (1036)
T ss_pred C-----HHHHHHHHHh-CcEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEeCC
Confidence 2 2333 56665 999999999999999999999999999999999999999884 69999999
Q ss_pred CCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Q 002909 718 NNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKVLNMGS 770 (867)
Q Consensus 718 ~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll~ly~ 770 (867)
.|+++++.+|.+++... ++....+++.+++.+.+.|||+.++++|+++|+
T Consensus 983 ~d~~aLa~AL~raL~~~---~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~ 1032 (1036)
T PLN02316 983 ADAAGVDYALNRAISAW---YDGRDWFNSLCKRVMEQDWSWNRPALDYMELYH 1032 (1036)
T ss_pred CCHHHHHHHHHHHHhhh---hhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Confidence 99999999999998422 344555677777778889999999999999765
No 13
>PRK14098 glycogen synthase; Provisional
Probab=100.00 E-value=8.7e-41 Score=389.12 Aligned_cols=438 Identities=15% Similarity=0.157 Sum_probs=293.6
Q ss_pred CCcceEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCCCCCCCCC--CCC--
Q 002909 278 PNMFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLIPNSKGTK--CSQ-- 353 (867)
Q Consensus 278 pm~~rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~~~~~g~~--~~~-- 353 (867)
|| |||++||....|- -.|||..=++- .|.++|+++||+|. |+++.+..-.... ...
T Consensus 4 ~~-~~il~v~~E~~p~-------~k~Ggl~dv~~--------~Lp~al~~~g~~v~----v~~P~y~~~~~~~~~~~~~~ 63 (489)
T PRK14098 4 RN-FKVLYVSGEVSPF-------VRVSALADFMA--------SFPQALEEEGFEAR----IMMPKYGTINDRKFRLHDVL 63 (489)
T ss_pred CC-cEEEEEeecchhh-------cccchHHHHHH--------HHHHHHHHCCCeEE----EEcCCCCchhhhhhccccce
Confidence 55 9999999988872 25899966665 45557888999999 9998764421110 000
Q ss_pred ccccc--cCCCCeEEEEcc--CCCccc---c-c--ccccccccch----------hhHH---HHHHHHHHHHHHHcCCCC
Q 002909 354 ELEPI--YDTKHSHILRIP--FKTEQA---I-L--PQWVSRFDIY----------PYLG---RFAQDATAKILDLMEGKP 410 (867)
Q Consensus 354 ~~e~i--~~~~~v~I~rvp--~~~~~~---~-l--~~~isr~~i~----------p~l~---~f~~~~~~~i~~~l~~kP 410 (867)
....+ .-.....+.++- .....+ + + ..+..|..++ ...+ .|...++..+ ...+.+|
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~f~r~~~y~~~~~g~~~~d~~~rf~~f~~a~l~~~-~~~~~~p 142 (489)
T PRK14098 64 RLSDIEVPLKEKTDLLHVKVTALPSSKIQTYFLYNEKYFKRNGLFTDMSLGGDLKGSAEKVIFFNVGVLETL-QRLGWKP 142 (489)
T ss_pred EEEEEEEeecCeeEEEEEEEecccCCCceEEEEeCHHHcCCCCcCCCCccCCCCCcHHHHHHHHHHHHHHHH-HhcCCCC
Confidence 00000 000011122110 000000 0 0 0122222222 1122 2333333333 3345689
Q ss_pred eEEEECCCChHHHHHHHHHhc-------CCcEEEEEcCCcccccccchhh-----hhhcCccccchhhhhHHHHHHhcCC
Q 002909 411 DLIIGNYSDGNLVASLMASKL-------GITQATIAHALEKSKYEDSDAK-----WKELDPKYHFSCQFTADLIAMNQTD 478 (867)
Q Consensus 411 DIIh~h~~~~~l~a~lla~~~-------gip~V~t~H~l~~~~~~~s~~~-----~~~~~~~y~f~~~~~~e~ial~~aD 478 (867)
||||+|.|.+++++.+++++. ++|+|+|+|++..+........ +........+...+...+.++..||
T Consensus 143 DiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~n~lk~~i~~ad 222 (489)
T PRK14098 143 DIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLLPEEVCSGLHREGDEVNMLYTGVEHAD 222 (489)
T ss_pred CEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhCCHHhhhhhhhcCCcccHHHHHHHhcC
Confidence 999999999999988887654 7999999999865442211100 0100000001011223345789999
Q ss_pred EEEecCHHHHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhc
Q 002909 479 FIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYS 558 (867)
Q Consensus 479 ~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~ 558 (867)
.|+|+|+..++.+.... . ..+.++++.+ ....++.+|+||||.+.|.|.++...+...-...++.+..+
T Consensus 223 ~VitVS~~~a~ei~~~~-~----~~~gl~~~l~------~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~~~k~~~ 291 (489)
T PRK14098 223 LLTTTSPRYAEEIAGDG-E----EAFGLDKVLE------ERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERLDGKLEN 291 (489)
T ss_pred cceeeCHHHHHHhCcCC-C----CCcChHHHHH------hcCCCeeEEeCCccccccCCcccccccccCCcchhhhHHHH
Confidence 99999998887554310 0 0112221111 01568999999999999998764322111111223333344
Q ss_pred ccccccccccccCCCCcEEEEEeccCCcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHH
Q 002909 559 KEDNSEHIGYLADRKKPIIFSMARLDTVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEK 638 (867)
Q Consensus 559 ~~~~~~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~ 638 (867)
+...++.+|+..++++++|+++||+.+.||++.|++|+..+.+ ++++|+|+|+|+. .+.+.+++++++
T Consensus 292 k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~--~~~~lvivG~G~~----------~~~~~l~~l~~~ 359 (489)
T PRK14098 292 KKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVE--LDIQLVICGSGDK----------EYEKRFQDFAEE 359 (489)
T ss_pred HHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHh--cCcEEEEEeCCCH----------HHHHHHHHHHHH
Confidence 5555678898766788999999999999999999999999875 4799999999864 355778888888
Q ss_pred cCCCCcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCCccceeec----CceEEE
Q 002909 639 YQLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIID----GVSGFH 714 (867)
Q Consensus 639 ~~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG~~EiI~d----g~~G~l 714 (867)
+ +++|.|+|. .+.+++..+++. +|+||+||.+|+||++++|||+||+|+|+++.||..|++.+ +.+|++
T Consensus 360 ~--~~~V~~~g~----~~~~~~~~~~a~-aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~l 432 (489)
T PRK14098 360 H--PEQVSVQTE----FTDAFFHLAIAG-LDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFI 432 (489)
T ss_pred C--CCCEEEEEe----cCHHHHHHHHHh-CCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCceeE
Confidence 7 478999994 445677788886 99999999999999999999999999999999999999874 679999
Q ss_pred eCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Q 002909 715 IDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKVLNMGS 770 (867)
Q Consensus 715 v~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll~ly~ 770 (867)
++++|+++++++|.++++ +..|++.|.+++++++ .++|||+.++++|+++|+
T Consensus 433 ~~~~d~~~la~ai~~~l~-~~~~~~~~~~~~~~~~---~~~fsw~~~a~~y~~lY~ 484 (489)
T PRK14098 433 FHDYTPEALVAKLGEALA-LYHDEERWEELVLEAM---ERDFSWKNSAEEYAQLYR 484 (489)
T ss_pred eCCCCHHHHHHHHHHHHH-HHcCHHHHHHHHHHHh---cCCCChHHHHHHHHHHHH
Confidence 999999999999998763 3478999998887764 479999999999999764
No 14
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=100.00 E-value=5.3e-40 Score=373.87 Aligned_cols=363 Identities=17% Similarity=0.203 Sum_probs=269.1
Q ss_pred eEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCCCCCCCCCCCCccccccCC
Q 002909 282 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLIPNSKGTKCSQELEPIYDT 361 (867)
Q Consensus 282 rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~~~~~g~~~~~~~e~i~~~ 361 (867)
||+++++.++| ..||.++++. +|++.|+++||+|+ |+|+..+...+ .+ ...
T Consensus 1 kI~~v~~~~~p---------~~GG~e~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~~------~~--~~~ 51 (398)
T cd03796 1 RICMVSDFFYP---------NLGGVETHIY--------QLSQCLIKRGHKVV----VITHAYGNRVG------IR--YLT 51 (398)
T ss_pred CeeEEeecccc---------ccccHHHHHH--------HHHHHHHHcCCeeE----EEeccCCcCCC------cc--ccc
Confidence 69999987775 6899999999 66778888999999 99975322111 01 112
Q ss_pred CCeEEEEccCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEECCCChH--HHHHHHHHhcCCcEEEEE
Q 002909 362 KHSHILRIPFKTEQAILPQWVSRFDIYPYLGRFAQDATAKILDLMEGKPDLIIGNYSDGN--LVASLMASKLGITQATIA 439 (867)
Q Consensus 362 ~~v~I~rvp~~~~~~~l~~~isr~~i~p~l~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~--l~a~lla~~~gip~V~t~ 439 (867)
.++.+.++|+..... ...+. ....+...+.+.+. ..+|||||+|.+.+. ..+.++++..++|+|++.
T Consensus 52 ~~i~v~~~p~~~~~~-------~~~~~-~~~~~~~~l~~~~~---~~~~DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~ 120 (398)
T cd03796 52 NGLKVYYLPFVVFYN-------QSTLP-TFFGTFPLLRNILI---RERITIVHGHQAFSALAHEALLHARTMGLKTVFTD 120 (398)
T ss_pred CceeEEEecceeccC-------Ccccc-chhhhHHHHHHHHH---hcCCCEEEECCCCchHHHHHHHHhhhcCCcEEEEe
Confidence 367888888653211 00111 11111122222222 258999999986653 346677888999999999
Q ss_pred cCCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHHHHhhcCCCCCccccccccccccceeeeccCCCC
Q 002909 440 HALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVF 519 (867)
Q Consensus 440 H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~ 519 (867)
|+....... ...+ +. ......++++|.||++|....+... ...+++
T Consensus 121 h~~~~~~~~--~~~~------~~-----~~~~~~~~~~d~ii~~s~~~~~~~~-------------------~~~~~~-- 166 (398)
T cd03796 121 HSLFGFADA--SSIH------TN-----KLLRFSLADVDHVICVSHTSKENTV-------------------LRASLD-- 166 (398)
T ss_pred cccccccch--hhHH------hh-----HHHHHhhccCCEEEEecHhHhhHHH-------------------HHhCCC--
Confidence 985431100 0000 00 0123367899999999986543110 011233
Q ss_pred CCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccccccccccCCCCcEEEEEeccCCcCChHHHHHHHHHh
Q 002909 520 DPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHIGYLADRKKPIIFSMARLDTVKNITGLTEWYGKN 599 (867)
Q Consensus 520 ~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l 599 (867)
..++.+||||+|.+.|.|.... . ++++++|+++||+.+.||++.|++|+..+
T Consensus 167 ~~k~~vi~ngvd~~~f~~~~~~--------------------------~--~~~~~~i~~~grl~~~Kg~~~li~a~~~l 218 (398)
T cd03796 167 PERVSVIPNAVDSSDFTPDPSK--------------------------R--DNDKITIVVISRLVYRKGIDLLVGIIPEI 218 (398)
T ss_pred hhhEEEEcCccCHHHcCCCccc--------------------------C--CCCceEEEEEeccchhcCHHHHHHHHHHH
Confidence 5689999999998877664321 0 45778999999999999999999999999
Q ss_pred HccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCC
Q 002909 600 KRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEA 679 (867)
Q Consensus 600 ~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~Eg 679 (867)
.+..++++|+|+|+|+. .+.++++++++++.++|.|+|+ ++.+++..+++. +|++|+||..|+
T Consensus 219 ~~~~~~~~l~i~G~g~~------------~~~l~~~~~~~~l~~~v~~~G~----~~~~~~~~~l~~-ad~~v~pS~~E~ 281 (398)
T cd03796 219 CKKHPNVRFIIGGDGPK------------RILLEEMREKYNLQDRVELLGA----VPHERVRDVLVQ-GHIFLNTSLTEA 281 (398)
T ss_pred HhhCCCEEEEEEeCCch------------HHHHHHHHHHhCCCCeEEEeCC----CCHHHHHHHHHh-CCEEEeCChhhc
Confidence 88889999999999864 4678889999999999999995 456799999997 999999999999
Q ss_pred CCHHHHHHHHcCCCEEecCCCCccceeecCceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHH
Q 002909 680 FGLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWK 759 (867)
Q Consensus 680 fGltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~ 759 (867)
||++++|||+||+|||+|+.||..|++.++. ++++ +.|+++++++|.+++ .++.....+++++++++.++|||+
T Consensus 282 ~g~~~~EAma~G~PVI~s~~gg~~e~i~~~~-~~~~-~~~~~~l~~~l~~~l----~~~~~~~~~~~~~~~~~~~~fs~~ 355 (398)
T cd03796 282 FCIAIVEAASCGLLVVSTRVGGIPEVLPPDM-ILLA-EPDVESIVRKLEEAI----SILRTGKHDPWSFHNRVKKMYSWE 355 (398)
T ss_pred cCHHHHHHHHcCCCEEECCCCCchhheeCCc-eeec-CCCHHHHHHHHHHHH----hChhhhhhHHHHHHHHHHhhCCHH
Confidence 9999999999999999999999999998764 4444 458999999999988 566656678899999999999999
Q ss_pred HHHHHHHHHH
Q 002909 760 IYANKVLNMG 769 (867)
Q Consensus 760 ~~a~~ll~ly 769 (867)
.++++++++|
T Consensus 356 ~~~~~~~~~y 365 (398)
T cd03796 356 DVAKRTEKVY 365 (398)
T ss_pred HHHHHHHHHH
Confidence 9999999954
No 15
>PRK10307 putative glycosyl transferase; Provisional
Probab=100.00 E-value=7.5e-40 Score=374.00 Aligned_cols=395 Identities=13% Similarity=0.104 Sum_probs=282.8
Q ss_pred ceEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCCCCCCCC---CCCCcccc
Q 002909 281 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLIPNSKGT---KCSQELEP 357 (867)
Q Consensus 281 ~rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~~~~~g~---~~~~~~e~ 357 (867)
|||+++|.+++| +.||.+.++. +|+++|.++||+|+ |+|+....+.+. .+......
T Consensus 1 mkIlii~~~~~P---------~~~g~~~~~~--------~l~~~L~~~G~~V~----vit~~~~~~~~~~~~~~~~~~~~ 59 (412)
T PRK10307 1 MKILVYGINYAP---------ELTGIGKYTG--------EMAEWLAARGHEVR----VITAPPYYPQWRVGEGYSAWRYR 59 (412)
T ss_pred CeEEEEecCCCC---------CccchhhhHH--------HHHHHHHHCCCeEE----EEecCCCCCCCCCCcccccccce
Confidence 799999988775 6799999988 56668888999999 999742111110 00000111
Q ss_pred ccCCCCeEEEEccCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEECCCCh--HHHHHHHHHhcCCcE
Q 002909 358 IYDTKHSHILRIPFKTEQAILPQWVSRFDIYPYLGRFAQDATAKILDLMEGKPDLIIGNYSDG--NLVASLMASKLGITQ 435 (867)
Q Consensus 358 i~~~~~v~I~rvp~~~~~~~l~~~isr~~i~p~l~~f~~~~~~~i~~~l~~kPDIIh~h~~~~--~l~a~lla~~~gip~ 435 (867)
....++++++|+|...... ...++ .+.. ...|.......+.+....+||+||+|.+.. ...+.+++++.++|+
T Consensus 60 ~~~~~~i~v~r~~~~~~~~--~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~Div~~~~p~~~~~~~~~~~~~~~~~~~ 134 (412)
T PRK10307 60 RESEGGVTVWRCPLYVPKQ--PSGLK--RLLH-LGSFALSSFFPLLAQRRWRPDRVIGVVPTLFCAPGARLLARLSGART 134 (412)
T ss_pred eeecCCeEEEEccccCCCC--ccHHH--HHHH-HHHHHHHHHHHHhhccCCCCCEEEEeCCcHHHHHHHHHHHHhhCCCE
Confidence 1123578999998643210 00011 1111 112333333433333336899999997643 456777888899999
Q ss_pred EEEEcCCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHHHHhhcCCCCCccccccccccccceeeecc
Q 002909 436 ATIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSG 515 (867)
Q Consensus 436 V~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~G 515 (867)
++++|+.+.......+. +. ......+. ...+..+++.+|.||++|+...+.+++ .|
T Consensus 135 v~~~~d~~~~~~~~~~~-~~-~~~~~~~~--~~~~~~~~~~ad~ii~~S~~~~~~~~~--------------------~~ 190 (412)
T PRK10307 135 WLHIQDYEVDAAFGLGL-LK-GGKVARLA--TAFERSLLRRFDNVSTISRSMMNKARE--------------------KG 190 (412)
T ss_pred EEEeccCCHHHHHHhCC-cc-CcHHHHHH--HHHHHHHHhhCCEEEecCHHHHHHHHH--------------------cC
Confidence 99999866432111000 00 00000111 123566889999999999987763321 13
Q ss_pred CCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccccccccccCCCCcEEEEEeccCCcCChHHHHHH
Q 002909 516 INVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHIGYLADRKKPIIFSMARLDTVKNITGLTEW 595 (867)
Q Consensus 516 I~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA 595 (867)
++ ..++.+||||+|.+.|.|....... ..++.+|+ ++++++|+|+||+.+.||++.|++|
T Consensus 191 ~~--~~~i~vi~ngvd~~~~~~~~~~~~~----------------~~~~~~~~--~~~~~~i~~~G~l~~~kg~~~li~a 250 (412)
T PRK10307 191 VA--AEKVIFFPNWSEVARFQPVADADVD----------------ALRAQLGL--PDGKKIVLYSGNIGEKQGLELVIDA 250 (412)
T ss_pred CC--cccEEEECCCcCHhhcCCCCccchH----------------HHHHHcCC--CCCCEEEEEcCccccccCHHHHHHH
Confidence 33 6789999999999888765321100 01134566 6678899999999999999999999
Q ss_pred HHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccccCCCChHHHHHHHHccCcEEEEcC
Q 002909 596 YGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPA 675 (867)
Q Consensus 596 ~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS 675 (867)
+..+.+ .++++|+|+|+|+. .+.++++++++++. +|+|+|+ ++.+++..+++. ||++|+||
T Consensus 251 ~~~l~~-~~~~~l~ivG~g~~------------~~~l~~~~~~~~l~-~v~f~G~----~~~~~~~~~~~~-aDi~v~ps 311 (412)
T PRK10307 251 ARRLRD-RPDLIFVICGQGGG------------KARLEKMAQCRGLP-NVHFLPL----QPYDRLPALLKM-ADCHLLPQ 311 (412)
T ss_pred HHHhcc-CCCeEEEEECCChh------------HHHHHHHHHHcCCC-ceEEeCC----CCHHHHHHHHHh-cCEeEEee
Confidence 998854 57899999999965 56788899999986 7999995 456789999987 99999999
Q ss_pred CCCC----CCHHHHHHHHcCCCEEecCCCC--ccceeecCceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHH
Q 002909 676 LYEA----FGLTVIEAMNCGLPTFATNQGG--PAEIIIDGVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGR 749 (867)
Q Consensus 676 ~~Eg----fGltvlEAMa~GlPVIat~~gG--~~EiI~dg~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar 749 (867)
..|+ +|.+++|||+||+|||+|+.|| ..|++. .+|++++++|+++++++|.+++ +|++.+++|+++|+
T Consensus 312 ~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~la~~i~~l~----~~~~~~~~~~~~a~ 385 (412)
T PRK10307 312 KAGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE--GIGVCVEPESVEALVAAIAALA----RQALLRPKLGTVAR 385 (412)
T ss_pred ccCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh--CCcEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHH
Confidence 9998 5677899999999999999877 357776 5999999999999999999888 89999999999999
Q ss_pred HHHHHhCCHHHHHHHHHHHHh
Q 002909 750 QRIYECYTWKIYANKVLNMGS 770 (867)
Q Consensus 750 ~~v~~~ysw~~~a~~ll~ly~ 770 (867)
+++.++|||+.++++++++|+
T Consensus 386 ~~~~~~fs~~~~~~~~~~~~~ 406 (412)
T PRK10307 386 EYAERTLDKENVLRQFIADIR 406 (412)
T ss_pred HHHHHHcCHHHHHHHHHHHHH
Confidence 999999999999999999654
No 16
>PRK14099 glycogen synthase; Provisional
Probab=100.00 E-value=9.4e-40 Score=380.12 Aligned_cols=435 Identities=16% Similarity=0.156 Sum_probs=282.9
Q ss_pred cceEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCCCCCCCCCCCC--cccc
Q 002909 280 MFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLIPNSKGTKCSQ--ELEP 357 (867)
Q Consensus 280 ~~rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~~~~~g~~~~~--~~e~ 357 (867)
.|||++||....|- -.|||..-++- -|.++|+++||+|. |+++.+..-... ... ....
T Consensus 3 ~~~il~v~~E~~p~-------~k~ggl~dv~~--------~lp~~l~~~g~~v~----v~~P~y~~~~~~-~~~~~~~~~ 62 (485)
T PRK14099 3 PLRVLSVASEIFPL-------IKTGGLADVAG--------ALPAALKAHGVEVR----TLVPGYPAVLAG-IEDAEQVHS 62 (485)
T ss_pred CcEEEEEEeccccc-------cCCCcHHHHHH--------HHHHHHHHCCCcEE----EEeCCCcchhhh-hcCceEEEE
Confidence 48999999988873 25899966665 45557888999999 999876432110 000 0011
Q ss_pred ccCC-C-CeEEEEccCCCccc-cc--cccccccc-ch---------hhHHHH--HHHHHHHHHHHc--CCCCeEEEECCC
Q 002909 358 IYDT-K-HSHILRIPFKTEQA-IL--PQWVSRFD-IY---------PYLGRF--AQDATAKILDLM--EGKPDLIIGNYS 418 (867)
Q Consensus 358 i~~~-~-~v~I~rvp~~~~~~-~l--~~~isr~~-i~---------p~l~~f--~~~~~~~i~~~l--~~kPDIIh~h~~ 418 (867)
+... . .+++.......-.- ++ ..+..|.. ++ ...++| +..+.-++...+ +.+|||||+|.|
T Consensus 63 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~f~r~~~~y~~~~~~~~~d~~~rf~~f~~a~~~~~~~~~~~~~pDIiH~Hdw 142 (485)
T PRK14099 63 FPDLFGGPARLLAARAGGLDLFVLDAPHLYDRPGNPYVGPDGKDWPDNAQRFAALARAAAAIGQGLVPGFVPDIVHAHDW 142 (485)
T ss_pred EeeeCCceEEEEEEEeCCceEEEEeChHhhCCCCCCCCCccCCCCCcHHHHHHHHHHHHHHHHhhhccCCCCCEEEECCc
Confidence 1000 0 11122111100000 00 11112211 11 122222 223333333322 469999999999
Q ss_pred ChHHHHHHHHH--hcCCcEEEEEcCCcccccccch------hhhhhcCc-cccchhhhhHHHHHHhcCCEEEecCHHHHh
Q 002909 419 DGNLVASLMAS--KLGITQATIAHALEKSKYEDSD------AKWKELDP-KYHFSCQFTADLIAMNQTDFIITSTYQEIA 489 (867)
Q Consensus 419 ~~~l~a~lla~--~~gip~V~t~H~l~~~~~~~s~------~~~~~~~~-~y~f~~~~~~e~ial~~aD~IIa~S~~~~~ 489 (867)
.+++++.++.. ..++|.|+|+|++......... +.+..+.. ...+.......+.++..||.|+|+|+..++
T Consensus 143 ~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~~ad~vitVS~~~a~ 222 (485)
T PRK14099 143 QAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQLADRITTVSPTYAL 222 (485)
T ss_pred HHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCchhhhhCCCccHHHHHHHhcCeeeecChhHHH
Confidence 99988877754 3468999999998654421111 11111100 000101111234578999999999998776
Q ss_pred hcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccccccccc
Q 002909 490 GSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHIGYL 569 (867)
Q Consensus 490 ~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~lGll 569 (867)
.+.+... ++.+.+++ .....++.+|+||||.+.|.|.++.......-...++.+..++...++++|+.
T Consensus 223 ei~~~~~------g~gl~~~l------~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~ 290 (485)
T PRK14099 223 EIQGPEA------GMGLDGLL------RQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQARFGLD 290 (485)
T ss_pred HHhcccC------CcChHHHH------HhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHHHHHcCCC
Confidence 5433210 01111000 01156899999999999998876532111111112222233344455778885
Q ss_pred cCCCCcEEEEEeccCCcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcE-EEc
Q 002909 570 ADRKKPIIFSMARLDTVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQF-RWI 648 (867)
Q Consensus 570 ~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V-~fl 648 (867)
.+++.++|+++||+.++||++.|++|+..+.+ .+++|+|+|+|.. .+.+.+++++++++ +++ .|+
T Consensus 291 ~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~--~~~~lvivG~G~~----------~~~~~l~~l~~~~~--~~v~~~~ 356 (485)
T PRK14099 291 PDPDALLLGVISRLSWQKGLDLLLEALPTLLG--EGAQLALLGSGDA----------ELEARFRAAAQAYP--GQIGVVI 356 (485)
T ss_pred cccCCcEEEEEecCCccccHHHHHHHHHHHHh--cCcEEEEEecCCH----------HHHHHHHHHHHHCC--CCEEEEe
Confidence 44578899999999999999999999998865 3799999999854 34567788887764 455 788
Q ss_pred ccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCCccceeecC---------ceEEEeCCCC
Q 002909 649 AAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIIDG---------VSGFHIDPNN 719 (867)
Q Consensus 649 G~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG~~EiI~dg---------~~G~lv~p~d 719 (867)
|+ .+++..+|.++||+||+||++|+||++++|||+||+|+|+|++||+.|+|.++ .+|++++++|
T Consensus 357 G~------~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d 430 (485)
T PRK14099 357 GY------DEALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSPVT 430 (485)
T ss_pred CC------CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeCCCC
Confidence 95 35788877545999999999999999999999999999999999999999875 6899999999
Q ss_pred HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Q 002909 720 GDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKVLNMGS 770 (867)
Q Consensus 720 ~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll~ly~ 770 (867)
+++++++|.+++. +.+|++.|++|+++++. ++|||+.++++|+++|+
T Consensus 431 ~~~La~ai~~a~~-l~~d~~~~~~l~~~~~~---~~fSw~~~a~~y~~lY~ 477 (485)
T PRK14099 431 ADALAAALRKTAA-LFADPVAWRRLQRNGMT---TDVSWRNPAQHYAALYR 477 (485)
T ss_pred HHHHHHHHHHHHH-HhcCHHHHHHHHHHhhh---hcCChHHHHHHHHHHHH
Confidence 9999999987432 23799999999999863 78999999999999654
No 17
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=100.00 E-value=1.5e-39 Score=378.33 Aligned_cols=433 Identities=19% Similarity=0.157 Sum_probs=292.5
Q ss_pred eEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCCCCCCCCCCCCcccc----
Q 002909 282 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLIPNSKGTKCSQELEP---- 357 (867)
Q Consensus 282 rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~~~~~g~~~~~~~e~---- 357 (867)
||++||+..+|-. .+||...++. .|+++|+++||+|. |+++........ .......
T Consensus 1 ~Il~v~~E~~p~~-------k~GGl~~~~~--------~L~~aL~~~G~~V~----Vi~p~y~~~~~~-~~~~~~~~~~~ 60 (476)
T cd03791 1 KVLFVASEVAPFA-------KTGGLGDVVG--------ALPKALAKLGHDVR----VIMPKYGRILDE-LRGQLLVLRLF 60 (476)
T ss_pred CEEEEEccccccc-------cCCcHHHHHH--------HHHHHHHHCCCeEE----EEecCCcchhhH-hccCeEEEEEE
Confidence 6999999877621 5899999998 56667788999999 999865442111 0000000
Q ss_pred --------------ccCCCCeEEEEccCCCccc--ccc--cccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEECCCC
Q 002909 358 --------------IYDTKHSHILRIPFKTEQA--ILP--QWVSRFDIYPYLGRFAQDATAKILDLMEGKPDLIIGNYSD 419 (867)
Q Consensus 358 --------------i~~~~~v~I~rvp~~~~~~--~l~--~~isr~~i~p~l~~f~~~~~~~i~~~l~~kPDIIh~h~~~ 419 (867)
....+++.++++....... .+. .+....+.......|...+...+.+ +..+|||||+|.|.
T Consensus 61 ~~~~~~~~~~~~~~~~~~~gv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~l~~-~~~~pDviH~hd~~ 139 (476)
T cd03791 61 GVPVGGRPEYVGVFELPVDGVPVYFLDNPDYFDRPGLYDDSGYDYEDNAERFALFSRAALELLRR-LGWKPDIIHCHDWH 139 (476)
T ss_pred eeccCCceeEEEEEEEEeCCceEEEEcChHHcCCCCCCCccCCCCccHHHHHHHHHHHHHHHHHh-cCCCCcEEEECchH
Confidence 0112356666654322110 000 0000000001112344444444443 35799999999999
Q ss_pred hHHHHHHHHHh------cCCcEEEEEcCCcccccccchh------hh--hhcCccccchhhhhHHHHHHhcCCEEEecCH
Q 002909 420 GNLVASLMASK------LGITQATIAHALEKSKYEDSDA------KW--KELDPKYHFSCQFTADLIAMNQTDFIITSTY 485 (867)
Q Consensus 420 ~~l~a~lla~~------~gip~V~t~H~l~~~~~~~s~~------~~--~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~ 485 (867)
+++++.+++.. .++|+|+|+|++.......... .| ......+.+...+..++.++..||.|+++|+
T Consensus 140 t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~ 219 (476)
T cd03791 140 TGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQVNFLKAGIVYADAVTTVSP 219 (476)
T ss_pred HHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcccccCCcccHHHHHHHhcCcCeecCH
Confidence 98888888776 3899999999986554211110 00 0000111222334456778999999999998
Q ss_pred HHHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccccc
Q 002909 486 QEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEH 565 (867)
Q Consensus 486 ~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~ 565 (867)
..++.+.+..+ +..+..+ +.....++.+|+||+|.+.|.|..+.................++...+++
T Consensus 220 ~~~~~i~~~~~------~~gl~~~------~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~ 287 (476)
T cd03791 220 TYAREILTPEF------GEGLDGL------LRARAGKLSGILNGIDYDVWNPATDPHLPANYSADDLEGKAENKAALQEE 287 (476)
T ss_pred hHHHHhCCCCC------CcchHHH------HHhccCCeEEEeCCCcCcccCccccchhhhcCCccccccHHHHHHHHHHH
Confidence 77765443211 0000000 01115789999999999999886543321111111222233344455577
Q ss_pred cccccCCCCcEEEEEeccCCcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcE
Q 002909 566 IGYLADRKKPIIFSMARLDTVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQF 645 (867)
Q Consensus 566 lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V 645 (867)
+|+..++++++|+++||+.+.||++.+++++..+.+. +++|+|+|+|.. .+.+.++++++++ .++|
T Consensus 288 ~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~--~~~lvi~G~g~~----------~~~~~~~~~~~~~--~~~v 353 (476)
T cd03791 288 LGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLEL--GGQLVILGSGDP----------EYEEALRELAARY--PGRV 353 (476)
T ss_pred cCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHc--CcEEEEEecCCH----------HHHHHHHHHHHhC--CCcE
Confidence 8875457899999999999999999999999998764 499999999854 3456677777765 5778
Q ss_pred EEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCCccceeecCc------eEEEeCCCC
Q 002909 646 RWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIIDGV------SGFHIDPNN 719 (867)
Q Consensus 646 ~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG~~EiI~dg~------~G~lv~p~d 719 (867)
.+.+. .+.+++..+++. ||++++||.+|+||++++|||+||+|||+|+.||..|+|.++. +|++++++|
T Consensus 354 ~~~~~----~~~~~~~~~~~~-aDv~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~ 428 (476)
T cd03791 354 AVLIG----YDEALAHLIYAG-ADFFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYN 428 (476)
T ss_pred EEEEe----CCHHHHHHHHHh-CCEEECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCCCC
Confidence 87652 333455566665 9999999999999999999999999999999999999999988 999999999
Q ss_pred HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Q 002909 720 GDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKVLNMGS 770 (867)
Q Consensus 720 ~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll~ly~ 770 (867)
+++++++|.++++. ..+++.|.++++++++ +.|||+.++++|+++|+
T Consensus 429 ~~~l~~~i~~~l~~-~~~~~~~~~~~~~~~~---~~fsw~~~a~~~~~~y~ 475 (476)
T cd03791 429 ADALLAALRRALAL-YRDPEAWRKLQRNAMA---QDFSWDRSAKEYLELYR 475 (476)
T ss_pred HHHHHHHHHHHHHH-HcCHHHHHHHHHHHhc---cCCChHHHHHHHHHHHh
Confidence 99999999998743 2468889999888865 57999999999999764
No 18
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=100.00 E-value=7.8e-39 Score=360.91 Aligned_cols=377 Identities=23% Similarity=0.311 Sum_probs=273.6
Q ss_pred ceEEEEccCccCCcccccCCCC-cccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCCCCCCCCCCCCcccccc
Q 002909 281 FNVVIFSPHGYFGQADVLGLPD-TGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLIPNSKGTKCSQELEPIY 359 (867)
Q Consensus 281 ~rI~ivs~hg~p~~~~vlG~pd-tGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~~~~~g~~~~~~~e~i~ 359 (867)
|||++++..++| + .||.++++. +|+++|+++ |+|+ |+|... .+ .
T Consensus 1 mkI~~i~~~~~p---------~~~GG~~~~v~--------~l~~~l~~~-~~v~----v~~~~~---------~~----~ 45 (388)
T TIGR02149 1 MKVTVLTREYPP---------NVYGGAGVHVE--------ELTRELARL-MDVD----VRCFGD---------QR----F 45 (388)
T ss_pred CeeEEEecccCc---------cccccHhHHHH--------HHHHHHHHh-cCee----EEcCCC---------ch----h
Confidence 799999876654 4 499999999 455566666 7777 666421 11 1
Q ss_pred CCCCeEEEEccCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEECCCChHHHHHHHHHhcCCcEEEEE
Q 002909 360 DTKHSHILRIPFKTEQAILPQWVSRFDIYPYLGRFAQDATAKILDLMEGKPDLIIGNYSDGNLVASLMASKLGITQATIA 439 (867)
Q Consensus 360 ~~~~v~I~rvp~~~~~~~l~~~isr~~i~p~l~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~l~a~lla~~~gip~V~t~ 439 (867)
..+++.+.+++..... ......+..+..++.. .....+||+||+|.+.+++.+.++++..++|+|++.
T Consensus 46 ~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~---~~~~~~~divh~~~~~~~~~~~~~~~~~~~p~v~~~ 113 (388)
T TIGR02149 46 DSEGLTVKGYRPWSEL---------KEANKALGTFSVDLAM---ANDPVDADVVHSHTWYTFLAGHLAKKLYDKPLVVTA 113 (388)
T ss_pred cCCCeEEEEecChhhc---------cchhhhhhhhhHHHHH---hhCCCCCCeEeecchhhhhHHHHHHHhcCCCEEEEe
Confidence 1235667666532210 1111222222222221 111247999999998777777777778899999999
Q ss_pred cCCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHHHHhhcCCCCCccccccccccccceeeeccCCCC
Q 002909 440 HALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVF 519 (867)
Q Consensus 440 H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~ 519 (867)
|+..+....... .....|.+.. ..+..+++.+|.||++|+...+.+.+.. .|++
T Consensus 114 h~~~~~~~~~~~----~~~~~~~~~~--~~~~~~~~~ad~vi~~S~~~~~~~~~~~------------------~~~~-- 167 (388)
T TIGR02149 114 HSLEPLRPWKEE----QLGGGYKLSS--WAEKTAIEAADRVIAVSGGMREDILKYY------------------PDLD-- 167 (388)
T ss_pred eccccccccccc----ccccchhHHH--HHHHHHHhhCCEEEEccHHHHHHHHHHc------------------CCCC--
Confidence 987643311100 0111122222 2355688999999999987665332211 1333
Q ss_pred CCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccccccccccCCCCcEEEEEeccCCcCChHHHHHHHHHh
Q 002909 520 DPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHIGYLADRKKPIIFSMARLDTVKNITGLTEWYGKN 599 (867)
Q Consensus 520 ~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l 599 (867)
..++.+||||+|.+.|.|......+ .++|+ ++++++|+++||+.+.||++.|++|+..+
T Consensus 168 ~~~i~vi~ng~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~Grl~~~Kg~~~li~a~~~l 226 (388)
T TIGR02149 168 PEKVHVIYNGIDTKEYKPDDGNVVL-------------------DRYGI--DRSRPYILFVGRITRQKGVPHLLDAVHYI 226 (388)
T ss_pred cceEEEecCCCChhhcCCCchHHHH-------------------HHhCC--CCCceEEEEEcccccccCHHHHHHHHHHH
Confidence 5689999999999888765332221 34565 67788999999999999999999999988
Q ss_pred HccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCC-CCcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCC
Q 002909 600 KRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQL-QGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYE 678 (867)
Q Consensus 600 ~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L-~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E 678 (867)
. ++++++++|++++ .....+.+++.+.+++. .++|.|++. .++.+++..+++. +|+||+||.+|
T Consensus 227 ~---~~~~l~i~g~g~~--------~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~~~~~~~~-aDv~v~ps~~e 291 (388)
T TIGR02149 227 P---KDVQVVLCAGAPD--------TPEVAEEVRQAVALLDRNRTGIIWINK---MLPKEELVELLSN-AEVFVCPSIYE 291 (388)
T ss_pred h---hcCcEEEEeCCCC--------cHHHHHHHHHHHHHhccccCceEEecC---CCCHHHHHHHHHh-CCEEEeCCccC
Confidence 5 4789999988754 11234566777777665 345787653 3557889999987 99999999999
Q ss_pred CCCHHHHHHHHcCCCEEecCCCCccceeecCceEEEeCCCCH------HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHH
Q 002909 679 AFGLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDPNNG------DESSNKIADFFEKCKTDAGYWNQMSAAGRQRI 752 (867)
Q Consensus 679 gfGltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~p~d~------e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v 752 (867)
+||++++|||+||+|||+|+.||..|++.++.+|++++++|+ ++++++|.+++ +|++.+++|++++++.+
T Consensus 292 ~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~a~~~~ 367 (388)
T TIGR02149 292 PLGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILL----ADPELAKKMGIAGRKRA 367 (388)
T ss_pred CCChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998 88999998887 89999999999999999
Q ss_pred HHhCCHHHHHHHHHHHHh
Q 002909 753 YECYTWKIYANKVLNMGS 770 (867)
Q Consensus 753 ~~~ysw~~~a~~ll~ly~ 770 (867)
.++|||+.+++++.++|+
T Consensus 368 ~~~~s~~~~~~~~~~~y~ 385 (388)
T TIGR02149 368 EEEFSWGSIAKKTVEMYR 385 (388)
T ss_pred HHhCCHHHHHHHHHHHHH
Confidence 999999999999999664
No 19
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=100.00 E-value=7.6e-39 Score=365.52 Aligned_cols=280 Identities=19% Similarity=0.232 Sum_probs=229.8
Q ss_pred CCCCeEEEECCCChHHHHHHHHH--hcCCcEEEEEcCCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecC
Q 002909 407 EGKPDLIIGNYSDGNLVASLMAS--KLGITQATIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITST 484 (867)
Q Consensus 407 ~~kPDIIh~h~~~~~l~a~lla~--~~gip~V~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S 484 (867)
+.+||+||+|++..+..+..+++ ..+.+.++|+|+........ ...|.. .....++++|+|+++|
T Consensus 116 ~~~~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~~~--------~~~~~~-----~~~~~~~~ad~vv~~S 182 (406)
T PRK15427 116 PFVADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSREV--------LNHYTP-----EYQQLFRRGDLMLPIS 182 (406)
T ss_pred cCCCCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccchh--------hhhhhH-----HHHHHHHhCCEEEECC
Confidence 45899999999877777777765 34557788999854221100 001110 1122578999999999
Q ss_pred HHHHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhccccccc
Q 002909 485 YQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSE 564 (867)
Q Consensus 485 ~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~ 564 (867)
+...+.+.+ .|++ .+|+.+||||+|.+.|.+.....
T Consensus 183 ~~~~~~l~~--------------------~g~~--~~ki~vi~nGvd~~~f~~~~~~~---------------------- 218 (406)
T PRK15427 183 DLWAGRLQK--------------------MGCP--PEKIAVSRMGVDMTRFSPRPVKA---------------------- 218 (406)
T ss_pred HHHHHHHHH--------------------cCCC--HHHEEEcCCCCCHHHcCCCcccc----------------------
Confidence 876653221 1444 67899999999998876532110
Q ss_pred ccccccCCCCcEEEEEeccCCcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCc
Q 002909 565 HIGYLADRKKPIIFSMARLDTVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQ 644 (867)
Q Consensus 565 ~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~ 644 (867)
..+...|+++||+.+.||++.+++|++.+.+..++++|+|+|+|+. .++++++++++++.++
T Consensus 219 ------~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~G~~------------~~~l~~~~~~~~l~~~ 280 (406)
T PRK15427 219 ------PATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGPW------------ERRLRTLIEQYQLEDV 280 (406)
T ss_pred ------CCCCeEEEEEeCcchhcCHHHHHHHHHHHHhhCCCEEEEEEECchh------------HHHHHHHHHHcCCCCe
Confidence 2345679999999999999999999999988788999999999965 5778999999999999
Q ss_pred EEEcccccCCCChHHHHHHHHccCcEEEEcCCC------CCCCHHHHHHHHcCCCEEecCCCCccceeecCceEEEeCCC
Q 002909 645 FRWIAAQTDRYRNGELYRCIADTKGAFVQPALY------EAFGLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDPN 718 (867)
Q Consensus 645 V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~------EgfGltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~p~ 718 (867)
|.|+|+ ++.+++..+|+. ||+||+||.. ||||++++|||+||+|||+|+.||..|+|.++.+|++++++
T Consensus 281 V~~~G~----~~~~el~~~l~~-aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~~~G~lv~~~ 355 (406)
T PRK15427 281 VEMPGF----KPSHEVKAMLDD-ADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLVPEN 355 (406)
T ss_pred EEEeCC----CCHHHHHHHHHh-CCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCCCceEEeCCC
Confidence 999996 456799999997 9999999974 99999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHhhc-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Q 002909 719 NGDESSNKIADFFEKCKT-DAGYWNQMSAAGRQRIYECYTWKIYANKVLNMGS 770 (867)
Q Consensus 719 d~e~lA~aI~~ll~~~~~-dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll~ly~ 770 (867)
|+++++++|.+++ + |++.+++|+++|++++.++|+|+..++++.++|+
T Consensus 356 d~~~la~ai~~l~----~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~ 404 (406)
T PRK15427 356 DAQALAQRLAAFS----QLDTDELAPVVKRAREKVETDFNQQVINRELASLLQ 404 (406)
T ss_pred CHHHHHHHHHHHH----hCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 9999999999988 7 9999999999999999999999999999999764
No 20
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=3.2e-38 Score=352.86 Aligned_cols=365 Identities=19% Similarity=0.276 Sum_probs=265.5
Q ss_pred ceEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCCCCCCCCCCCCccccccC
Q 002909 281 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLIPNSKGTKCSQELEPIYD 360 (867)
Q Consensus 281 ~rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~~~~~g~~~~~~~e~i~~ 360 (867)
|||++++ +| ..||.++++. +|++.|.++||+|+ |+|...+. . .. ..
T Consensus 1 mki~~~~---~p---------~~gG~~~~~~--------~la~~L~~~G~~v~----v~~~~~~~------~-~~---~~ 46 (371)
T cd04962 1 MKIGIVC---YP---------TYGGSGVVAT--------ELGKALARRGHEVH----FITSSRPF------R-LD---EY 46 (371)
T ss_pred CceeEEE---Ee---------CCCCccchHH--------HHHHHHHhcCCceE----EEecCCCc------c-hh---hh
Confidence 6899997 23 4699999999 56667788999999 88874221 0 00 11
Q ss_pred CCCeEEEEccCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEECCCChHHHHHHHHHh----cCCcEE
Q 002909 361 TKHSHILRIPFKTEQAILPQWVSRFDIYPYLGRFAQDATAKILDLMEGKPDLIIGNYSDGNLVASLMASK----LGITQA 436 (867)
Q Consensus 361 ~~~v~I~rvp~~~~~~~l~~~isr~~i~p~l~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~l~a~lla~~----~gip~V 436 (867)
.+++.+..++..... ......+.......+.+.+.+ .+|||||+|++.......+++++ .++|++
T Consensus 47 ~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~l~~~i~~---~~~divh~~~~~~~~~~~~~~~~~~~~~~~~~i 115 (371)
T cd04962 47 SPNIFFHEVEVPQYP--------LFQYPPYDLALASKIAEVAKR---YKLDLLHVHYAVPHAVAAYLAREILGKKDLPVV 115 (371)
T ss_pred ccCeEEEEecccccc--------hhhcchhHHHHHHHHHHHHhc---CCccEEeecccCCccHHHHHHHHhcCcCCCcEE
Confidence 123333333322110 001111111222333333332 49999999986554333333322 389999
Q ss_pred EEEcCCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHHHHhhcCCCCCccccccccccccceeeeccC
Q 002909 437 TIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGI 516 (867)
Q Consensus 437 ~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI 516 (867)
++.|+........ ...+. .....+++.+|.|+++|+...+.+.+. +.
T Consensus 116 ~~~h~~~~~~~~~--------~~~~~-----~~~~~~~~~~d~ii~~s~~~~~~~~~~--------------------~~ 162 (371)
T cd04962 116 TTLHGTDITLVGQ--------DPSFQ-----PATRFSIEKSDGVTAVSESLRQETYEL--------------------FD 162 (371)
T ss_pred EEEcCCccccccc--------cccch-----HHHHHHHhhCCEEEEcCHHHHHHHHHh--------------------cC
Confidence 9999753221100 11111 113347789999999998766532211 00
Q ss_pred CCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccccccccccCCCCcEEEEEeccCCcCChHHHHHHH
Q 002909 517 NVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHIGYLADRKKPIIFSMARLDTVKNITGLTEWY 596 (867)
Q Consensus 517 ~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~ 596 (867)
...++.+||||+|...|.+......+ ..+++ .+++++++++||+.+.||++.+++++
T Consensus 163 --~~~~i~vi~n~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~il~~g~l~~~K~~~~li~a~ 219 (371)
T cd04962 163 --ITKEIEVIPNFVDEDRFRPKPDEALK-------------------RRLGA--PEGEKVLIHISNFRPVKRIDDVIRIF 219 (371)
T ss_pred --CcCCEEEecCCcCHhhcCCCchHHHH-------------------HhcCC--CCCCeEEEEecccccccCHHHHHHHH
Confidence 15689999999998877654432211 23454 56788999999999999999999999
Q ss_pred HHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccccCCCChHHHHHHHHccCcEEEEcCC
Q 002909 597 GKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPAL 676 (867)
Q Consensus 597 ~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~ 676 (867)
..+.+. .+++|+|+|+|++ .+.++++++++++.++|.|+|.+. ++..+++. +|++|+||.
T Consensus 220 ~~l~~~-~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~v~~~g~~~------~~~~~~~~-~d~~v~ps~ 279 (371)
T cd04962 220 AKVRKE-VPARLLLVGDGPE------------RSPAERLARELGLQDDVLFLGKQD------HVEELLSI-ADLFLLPSE 279 (371)
T ss_pred HHHHhc-CCceEEEEcCCcC------------HHHHHHHHHHcCCCceEEEecCcc------cHHHHHHh-cCEEEeCCC
Confidence 998764 5699999999976 456788889999999999999643 46777776 999999999
Q ss_pred CCCCCHHHHHHHHcCCCEEecCCCCccceeecCceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhC
Q 002909 677 YEAFGLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECY 756 (867)
Q Consensus 677 ~EgfGltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~y 756 (867)
.|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++ .|++.+.+|++++++.+.++|
T Consensus 280 ~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~~~f 355 (371)
T cd04962 280 KESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSLL----EDDELWQEFSRAARNRAAERF 355 (371)
T ss_pred cCCCccHHHHHHHcCCCEEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999999888 899999999999999988999
Q ss_pred CHHHHHHHHHHHHh
Q 002909 757 TWKIYANKVLNMGS 770 (867)
Q Consensus 757 sw~~~a~~ll~ly~ 770 (867)
||+.+++++.++|+
T Consensus 356 s~~~~~~~~~~~y~ 369 (371)
T cd04962 356 DSERIVPQYEALYR 369 (371)
T ss_pred CHHHHHHHHHHHHH
Confidence 99999999999764
No 21
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=100.00 E-value=1.7e-38 Score=368.98 Aligned_cols=379 Identities=18% Similarity=0.237 Sum_probs=265.3
Q ss_pred CCcceEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCCCCCCCCCCCCcccc
Q 002909 278 PNMFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLIPNSKGTKCSQELEP 357 (867)
Q Consensus 278 pm~~rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~~~~~g~~~~~~~e~ 357 (867)
-+.|||++++ +.+| .+..||.+.++. +|+++|.++||+|+ |+|..... .+.
T Consensus 56 ~~~mrI~~~~-~~~~-------~~~~gG~~~~~~--------~l~~~L~~~G~eV~----vlt~~~~~---------~~~ 106 (465)
T PLN02871 56 SRPRRIALFV-EPSP-------FSYVSGYKNRFQ--------NFIRYLREMGDEVL----VVTTDEGV---------PQE 106 (465)
T ss_pred CCCceEEEEE-CCcC-------CcccccHHHHHH--------HHHHHHHHCCCeEE----EEecCCCC---------Ccc
Confidence 3458999997 3332 135799999998 56667888999999 99874211 011
Q ss_pred ccCCCCeEEEEccCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEECCCCh-HHHHHHHHHhcCCcEE
Q 002909 358 IYDTKHSHILRIPFKTEQAILPQWVSRFDIYPYLGRFAQDATAKILDLMEGKPDLIIGNYSDG-NLVASLMASKLGITQA 436 (867)
Q Consensus 358 i~~~~~v~I~rvp~~~~~~~l~~~isr~~i~p~l~~f~~~~~~~i~~~l~~kPDIIh~h~~~~-~l~a~lla~~~gip~V 436 (867)
. .++.++++...... + ..... +.+ .+...+.+.+.+ .+|||||+|.+.. .+.+.++++..++|+|
T Consensus 107 ~---~g~~v~~~~~~~~~-~----~~~~~-~~~--~~~~~l~~~i~~---~kpDiIh~~~~~~~~~~~~~~ak~~~ip~V 172 (465)
T PLN02871 107 F---HGAKVIGSWSFPCP-F----YQKVP-LSL--ALSPRIISEVAR---FKPDLIHASSPGIMVFGALFYAKLLCVPLV 172 (465)
T ss_pred c---cCceeeccCCcCCc-c----CCCce-eec--cCCHHHHHHHHh---CCCCEEEECCCchhHHHHHHHHHHhCCCEE
Confidence 1 13444443321110 0 00000 000 011123333333 4899999997643 3455667788999999
Q ss_pred EEEcCCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHHHHhhcCCCCCccccccccccccceeeeccC
Q 002909 437 TIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGI 516 (867)
Q Consensus 437 ~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI 516 (867)
++.|+............| . +.. .+...+..++.+|.|+++|....+.+.+. ...
T Consensus 173 ~~~h~~~~~~~~~~~~~~--~---~~~--~~~~~r~~~~~ad~ii~~S~~~~~~l~~~-------------------~~~ 226 (465)
T PLN02871 173 MSYHTHVPVYIPRYTFSW--L---VKP--MWDIIRFLHRAADLTLVTSPALGKELEAA-------------------GVT 226 (465)
T ss_pred EEEecCchhhhhcccchh--h---HHH--HHHHHHHHHhhCCEEEECCHHHHHHHHHc-------------------CCC
Confidence 999985432211111001 0 000 01123456789999999998776533221 011
Q ss_pred CCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccccccccccCCCCcEEEEEeccCCcCChHHHHHHH
Q 002909 517 NVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHIGYLADRKKPIIFSMARLDTVKNITGLTEWY 596 (867)
Q Consensus 517 ~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~ 596 (867)
+ .+++.+||||+|.+.|.|........ ..+.. ..+++++|+|+||+.+.||++.+++++
T Consensus 227 ~--~~kv~vi~nGvd~~~f~p~~~~~~~~------------------~~~~~-~~~~~~~i~~vGrl~~~K~~~~li~a~ 285 (465)
T PLN02871 227 A--ANRIRVWNKGVDSESFHPRFRSEEMR------------------ARLSG-GEPEKPLIVYVGRLGAEKNLDFLKRVM 285 (465)
T ss_pred C--cCeEEEeCCccCccccCCccccHHHH------------------HHhcC-CCCCCeEEEEeCCCchhhhHHHHHHHH
Confidence 2 56899999999999887753322110 11111 034678999999999999999999998
Q ss_pred HHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccccCCCChHHHHHHHHccCcEEEEcCC
Q 002909 597 GKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPAL 676 (867)
Q Consensus 597 ~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~ 676 (867)
.++ ++++|+|+|+|+. .+.++++++. .+|.|+|+ ++.+++..+|+. +|+||+||.
T Consensus 286 ~~~----~~~~l~ivG~G~~------------~~~l~~~~~~----~~V~f~G~----v~~~ev~~~~~~-aDv~V~pS~ 340 (465)
T PLN02871 286 ERL----PGARLAFVGDGPY------------REELEKMFAG----TPTVFTGM----LQGDELSQAYAS-GDVFVMPSE 340 (465)
T ss_pred HhC----CCcEEEEEeCChH------------HHHHHHHhcc----CCeEEecc----CCHHHHHHHHHH-CCEEEECCc
Confidence 865 4799999999864 4556666553 47999995 445799999997 999999999
Q ss_pred CCCCCHHHHHHHHcCCCEEecCCCCccceeec---CceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH
Q 002909 677 YEAFGLTVIEAMNCGLPTFATNQGGPAEIIID---GVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIY 753 (867)
Q Consensus 677 ~EgfGltvlEAMa~GlPVIat~~gG~~EiI~d---g~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~ 753 (867)
.|+||++++|||+||+|||+|+.||..|++.+ +.+|++++++|+++++++|.+++ +|++.+++|++++++.+
T Consensus 341 ~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll----~~~~~~~~~~~~a~~~~- 415 (465)
T PLN02871 341 SETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLL----ADPELRERMGAAAREEV- 415 (465)
T ss_pred ccccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH-
Confidence 99999999999999999999999999999999 99999999999999999999988 89999999999999988
Q ss_pred HhCCHHHHHHHHHH-HHh-HHHHHH
Q 002909 754 ECYTWKIYANKVLN-MGS-IYGFWR 776 (867)
Q Consensus 754 ~~ysw~~~a~~ll~-ly~-~~~f~~ 776 (867)
++|||+.+++++++ +|+ +..+|+
T Consensus 416 ~~fsw~~~a~~l~~~~Y~~~~~~~~ 440 (465)
T PLN02871 416 EKWDWRAATRKLRNEQYSAAIWFWR 440 (465)
T ss_pred HhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 68999999999998 454 333443
No 22
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=100.00 E-value=1.1e-37 Score=353.19 Aligned_cols=373 Identities=15% Similarity=0.212 Sum_probs=272.9
Q ss_pred CcceEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCCCCCCCCCCCCccccc
Q 002909 279 NMFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLIPNSKGTKCSQELEPI 358 (867)
Q Consensus 279 m~~rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~~~~~g~~~~~~~e~i 358 (867)
|+-||++++.--+|-+ .. ..||+++|+. +++++|+ ++|+ |+|...+. +. ..+.
T Consensus 1 ~~~~~~~~~~~~~~~p----~~-~~g~ve~~~~--------~~~~~l~---~~~~----~~~~~~~~-----~~-~~~~- 53 (380)
T PRK15484 1 MIDKIIFTVTPIFSIP----PR-GAAAVETWIY--------QVAKRTS---IPNR----IACIKNPG-----YP-EYTK- 53 (380)
T ss_pred CCceEEEEeccCCCCC----Cc-cccHHHHHHH--------Hhhhhcc---CCee----EEEecCCC-----CC-chhh-
Confidence 6778988887777633 21 3799999999 5555663 3898 99985431 11 1111
Q ss_pred cCCCCeEEEEccCCCccc-ccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEECCCChHHHHHHHHHhcCCcEEE
Q 002909 359 YDTKHSHILRIPFKTEQA-ILPQWVSRFDIYPYLGRFAQDATAKILDLMEGKPDLIIGNYSDGNLVASLMASKLGITQAT 437 (867)
Q Consensus 359 ~~~~~v~I~rvp~~~~~~-~l~~~isr~~i~p~l~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~l~a~lla~~~gip~V~ 437 (867)
..+|+.+.++++..... ...+|.+. .-+ .|...+...+......++||||+|.... +...+..+..+.|.+.
T Consensus 54 -~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~vi~v~~~~~-~~~~~~~~~~~~~~v~ 126 (380)
T PRK15484 54 -VNDNCDIHYIGFSRIYKRLFQKWTRL-DPL----PYSQRILNIAHKFTITKDSVIVIHNSMK-LYRQIRERAPQAKLVM 126 (380)
T ss_pred -ccCCCceEEEEeccccchhhhhhhcc-Cch----hHHHHHHHHHHhcCCCCCcEEEEeCcHH-hHHHHHhhCCCCCEEE
Confidence 12356677776644221 22233222 222 2333444444333245799999997543 4444555567789999
Q ss_pred EEcCCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHHHHhhcCCCCCccccccccccccceeeeccCC
Q 002909 438 IAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGIN 517 (867)
Q Consensus 438 t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~ 517 (867)
+.|..+... .+..++.||++|....+...+ +.+
T Consensus 127 ~~h~~~~~~--------------------------~~~~~~~ii~~S~~~~~~~~~---------------------~~~ 159 (380)
T PRK15484 127 HMHNAFEPE--------------------------LLDKNAKIIVPSQFLKKFYEE---------------------RLP 159 (380)
T ss_pred EEecccChh--------------------------HhccCCEEEEcCHHHHHHHHh---------------------hCC
Confidence 999632111 235689999999876652221 111
Q ss_pred CCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccccccccccCCCCcEEEEEeccCCcCChHHHHHHHH
Q 002909 518 VFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHIGYLADRKKPIIFSMARLDTVKNITGLTEWYG 597 (867)
Q Consensus 518 ~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~ 597 (867)
..++.+||||+|.+.|.+......+ +.+|+ ++++++|+++||+.+.||++.|++|+.
T Consensus 160 --~~~i~vIpngvd~~~~~~~~~~~~~-------------------~~~~~--~~~~~~il~~Grl~~~Kg~~~Li~A~~ 216 (380)
T PRK15484 160 --NADISIVPNGFCLETYQSNPQPNLR-------------------QQLNI--SPDETVLLYAGRISPDKGILLLMQAFE 216 (380)
T ss_pred --CCCEEEecCCCCHHHcCCcchHHHH-------------------HHhCC--CCCCeEEEEeccCccccCHHHHHHHHH
Confidence 5679999999998888765332211 34555 567789999999999999999999999
Q ss_pred HhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccccCCCChHHHHHHHHccCcEEEEcCCC
Q 002909 598 KNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALY 677 (867)
Q Consensus 598 ~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~ 677 (867)
++.+..++++|+|+|++... ...+...+.+.+++++++++ .+|.|+|+ ++.+++..+|+. ||++|+||.+
T Consensus 217 ~l~~~~p~~~lvivG~g~~~---~~~~~~~~~~~l~~~~~~l~--~~v~~~G~----~~~~~l~~~~~~-aDv~v~pS~~ 286 (380)
T PRK15484 217 KLATAHSNLKLVVVGDPTAS---SKGEKAAYQKKVLEAAKRIG--DRCIMLGG----QPPEKMHNYYPL-ADLVVVPSQV 286 (380)
T ss_pred HHHHhCCCeEEEEEeCCccc---cccchhHHHHHHHHHHHhcC--CcEEEeCC----CCHHHHHHHHHh-CCEEEeCCCC
Confidence 99888899999999998641 12233355667777777765 68999995 456799999997 9999999975
Q ss_pred -CCCCHHHHHHHHcCCCEEecCCCCccceeecCceEE-EeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHh
Q 002909 678 -EAFGLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGF-HIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYEC 755 (867)
Q Consensus 678 -EgfGltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~-lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ 755 (867)
|+||++++|||+||+|||+|+.||..|++.++.+|+ ++++.|+++++++|..++ +|++. .+|++++++.+.++
T Consensus 287 ~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll----~d~~~-~~~~~~ar~~~~~~ 361 (380)
T PRK15484 287 EEAFCMVAVEAMAAGKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTL----ADPEL-TQIAEQAKDFVFSK 361 (380)
T ss_pred ccccccHHHHHHHcCCCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHH----cCHHH-HHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999 568899999999999888 88885 78999999999999
Q ss_pred CCHHHHHHHHHHHHh
Q 002909 756 YTWKIYANKVLNMGS 770 (867)
Q Consensus 756 ysw~~~a~~ll~ly~ 770 (867)
|||+.++++++++|.
T Consensus 362 fsw~~~a~~~~~~l~ 376 (380)
T PRK15484 362 YSWEGVTQRFEEQIH 376 (380)
T ss_pred CCHHHHHHHHHHHHH
Confidence 999999999999764
No 23
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=100.00 E-value=5e-37 Score=349.08 Aligned_cols=367 Identities=15% Similarity=0.144 Sum_probs=248.2
Q ss_pred HHHHHHHHCCCceeeccEEEecCCCCCCCCCCCCccccccCCCCeEEEEccCCCcccccccccccccchhhHHHHHH---
Q 002909 320 ELLLRIKQQGLSVKPQILVVTRLIPNSKGTKCSQELEPIYDTKHSHILRIPFKTEQAILPQWVSRFDIYPYLGRFAQ--- 396 (867)
Q Consensus 320 eLa~~L~~~GheV~~~V~VvT~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~l~~~isr~~i~p~l~~f~~--- 396 (867)
+|+++|+++||+|+ ++|..... . ..+ ++++++++...... ...++|...|..
T Consensus 15 ~la~~L~~~G~~v~----~~~~~~~~---------~--~~~--~v~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ 69 (396)
T cd03818 15 HLAPALAAQGHEVV----FLTEPNAA---------P--PPG--GVRVVRYRPPRGPT--------SGTHPYLREFEEAVL 69 (396)
T ss_pred HHHHHHHHCCCEEE----EEecCCCC---------C--CCC--CeeEEEecCCCCCC--------CCCCccchhHHHHHH
Confidence 57888999999999 99984211 0 111 57888877543211 122333332222
Q ss_pred ---HHHHHHHH--HcCCCCeEEEECCCChHHHHHHHHHh-cCCcEEEEEcCCcccccccchhhhhhcCcc---ccchhhh
Q 002909 397 ---DATAKILD--LMEGKPDLIIGNYSDGNLVASLMASK-LGITQATIAHALEKSKYEDSDAKWKELDPK---YHFSCQF 467 (867)
Q Consensus 397 ---~~~~~i~~--~l~~kPDIIh~h~~~~~l~a~lla~~-~gip~V~t~H~l~~~~~~~s~~~~~~~~~~---y~f~~~~ 467 (867)
.+.+.+.. .-+.+|||||+|...+ .+..+.+. .++|+|.+.|..........+......... .+.....
T Consensus 70 ~~~~~~~~~~~~~~~~~~pdvi~~h~~~~--~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (396)
T cd03818 70 RGQAVARALLALRAKGFRPDVIVAHPGWG--ETLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLDDALRLRNRN 147 (396)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEECCccc--hhhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchhHHHHHHHhh
Confidence 12222222 2256899999997654 22234444 468888766532211110000000000000 0111111
Q ss_pred hHHHHHHhcCCEEEecCHHHHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchHhhhhcc
Q 002909 468 TADLIAMNQTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTS 547 (867)
Q Consensus 468 ~~e~ial~~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~ 547 (867)
......++.+|.||++|....+.+.+. +..++.|||||+|.+.|.|.........
T Consensus 148 ~~~~~~~~~ad~vi~~s~~~~~~~~~~------------------------~~~ki~vI~ngvd~~~f~~~~~~~~~~~- 202 (396)
T cd03818 148 ALILLALAQADAGVSPTRWQRSTFPAE------------------------LRSRISVIHDGIDTDRLRPDPQARLRLP- 202 (396)
T ss_pred hHhHHHHHhCCEEECCCHHHHhhCcHh------------------------hccceEEeCCCccccccCCCchhhhccc-
Confidence 113357899999999998776522211 1468999999999999887644322111
Q ss_pred CCcchHHhhhcccccccccccccCCCCcEEEEEec-cCCcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHH
Q 002909 548 FHPDIEELLYSKEDNSEHIGYLADRKKPIIFSMAR-LDTVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEI 626 (867)
Q Consensus 548 ~~~~i~~~l~~~~~~~~~lGll~~~~k~iIl~vGR-L~~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~ 626 (867)
...++ .+++++|+++|| +.+.||++.+++|+..+.+..++++|+|+|++...+........
T Consensus 203 ----------------~~~~~--~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~lvivG~~~~~~g~~~~~~~ 264 (396)
T cd03818 203 ----------------NGRVL--TPGDEVITFVARNLEPYRGFHVFMRALPRLLRARPDARVVIVGGDGVSYGAPPPDGE 264 (396)
T ss_pred ----------------ccccC--CCCCeEEEEECCCcccccCHHHHHHHHHHHHHHCCCcEEEEEcCCCcccCCCCCCcc
Confidence 11122 457789999998 99999999999999999888899999999985421111100001
Q ss_pred HHHHHH-HHHHHHcCCCCcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCCccce
Q 002909 627 AEIKKM-HTLIEKYQLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEI 705 (867)
Q Consensus 627 ~~~~~l-~~li~~~~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG~~Ei 705 (867)
.+.+.+ +++..+++ .++|.|+|+ ++.+++..+|+. +|++|+||..|++|++++||||||+|||+|+.||..|+
T Consensus 265 ~~~~~~~~~~~~~~~-~~~V~f~G~----v~~~~~~~~l~~-adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~g~~e~ 338 (396)
T cd03818 265 SWKQHMLDELGGRLD-LSRVHFLGR----VPYDQYLALLQV-SDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTAPVREV 338 (396)
T ss_pred cHHHHHHHHhhcccC-cceEEEeCC----CCHHHHHHHHHh-CcEEEEcCcccccchHHHHHHHCCCCEEEcCCCCchhh
Confidence 112222 22222222 478999995 556899999987 99999999999999999999999999999999999999
Q ss_pred eecCceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 002909 706 IIDGVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKVL 766 (867)
Q Consensus 706 I~dg~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll 766 (867)
+.++.+|++++++|+++++++|.+++ +|++.+.+|+++|++++.++|||+.++++|+
T Consensus 339 i~~~~~G~lv~~~d~~~la~~i~~ll----~~~~~~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 339 ITDGENGLLVDFFDPDALAAAVIELL----DDPARRARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred cccCCceEEcCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 99999999999999999999999988 8999999999999999999999999999886
No 24
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=100.00 E-value=2.3e-37 Score=349.41 Aligned_cols=386 Identities=19% Similarity=0.233 Sum_probs=262.0
Q ss_pred ceEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCCCCCCCCCCCCccccccC
Q 002909 281 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLIPNSKGTKCSQELEPIYD 360 (867)
Q Consensus 281 ~rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~~~~~g~~~~~~~e~i~~ 360 (867)
|||+++.|... .||.++++. +|+++|+++||+|+ |+|...+. +. +. .+...+
T Consensus 1 mkIl~~~~~~~-----------~gG~e~~~~--------~la~~L~~~G~~V~----v~~~~~~~--~~-~~--~~~~~~ 52 (392)
T cd03805 1 LRVAFIHPDLG-----------IGGAERLVV--------DAALALQSRGHEVT----IYTSHHDP--SH-CF--EETKDG 52 (392)
T ss_pred CeEEEECCCCC-----------CchHHHHHH--------HHHHHHHhCCCeEE----EEcCCCCc--hh-cc--hhccCC
Confidence 79999986643 699999999 56667778999999 99863211 00 00 111111
Q ss_pred CCCeEEEEccCCCcccccccccccccchhhHHHHHHHHHHHHH--HHcCCCCeEEEECCCChHHHHHHHHHhcCCcEEEE
Q 002909 361 TKHSHILRIPFKTEQAILPQWVSRFDIYPYLGRFAQDATAKIL--DLMEGKPDLIIGNYSDGNLVASLMASKLGITQATI 438 (867)
Q Consensus 361 ~~~v~I~rvp~~~~~~~l~~~isr~~i~p~l~~f~~~~~~~i~--~~l~~kPDIIh~h~~~~~l~a~lla~~~gip~V~t 438 (867)
++.+...+....... .++ ...+..+.......+. .....++|+||+|....+... +....+.|++++
T Consensus 53 --~~~i~~~~~~~~~~~----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~--~~~~~~~~~i~~ 121 (392)
T cd03805 53 --TLPVRVRGDWLPRSI----FGR---FHILCAYLRMLYLALYLLLLPDEKYDVFIVDQVSACVPL--LKLFSPSKILFY 121 (392)
T ss_pred --eeEEEEEeEEEcchh----hHh---HHHHHHHHHHHHHHHHHHhcccCCCCEEEEcCcchHHHH--HHHhcCCcEEEE
Confidence 122222211000000 011 0011111111111111 112468999999875543322 223334899999
Q ss_pred EcCCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHHHHhhcCCCCCccccccccccccceeeeccCCC
Q 002909 439 AHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINV 518 (867)
Q Consensus 439 ~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~ 518 (867)
.|............ + ...|+.. ....+..+++.+|.|+++|....+.+.+.++ ++.
T Consensus 122 ~h~~~~~~~~~~~~-~---~~~~~~~-~~~~e~~~~~~ad~ii~~s~~~~~~~~~~~~------------------~~~- 177 (392)
T cd03805 122 CHFPDQLLAQRGSL-L---KRLYRKP-FDWLEEFTTGMADKIVVNSNFTASVFKKTFP------------------SLA- 177 (392)
T ss_pred EecChHHhcCCCcH-H---HHHHHHH-HHHHHHHHhhCceEEEEcChhHHHHHHHHhc------------------ccc-
Confidence 99422111000000 0 0111111 1123556889999999999876553322111 111
Q ss_pred CCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccccccccccCCCCcEEEEEeccCCcCChHHHHHHHHH
Q 002909 519 FDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHIGYLADRKKPIIFSMARLDTVKNITGLTEWYGK 598 (867)
Q Consensus 519 ~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~ 598 (867)
..++.+|+||+|.+.|.+....... ...+. .+++++|+++||+.+.||++.+++|+.+
T Consensus 178 -~~~~~vi~n~vd~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~grl~~~Kg~~~ll~a~~~ 235 (392)
T cd03805 178 -KNPREVVYPCVDTDSFESTSEDPDP-------------------GLLIP--KSGKKTFLSINRFERKKNIALAIEAFAI 235 (392)
T ss_pred -cCCcceeCCCcCHHHcCcccccccc-------------------ccccc--CCCceEEEEEeeecccCChHHHHHHHHH
Confidence 2345699999999887664322100 11222 5677899999999999999999999999
Q ss_pred hHccC---CCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHH-cCCCCcEEEcccccCCCChHHHHHHHHccCcEEEEc
Q 002909 599 NKRLR---NMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEK-YQLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQP 674 (867)
Q Consensus 599 l~~~~---~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~-~~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~P 674 (867)
+.+.. ++++|+++|+++. ...++..+.+++++++++ +++.++|.|+|+ ++..++..++.. ||++++|
T Consensus 236 l~~~~~~~~~~~l~i~G~~~~----~~~~~~~~~~~l~~~~~~~~~l~~~V~f~g~----~~~~~~~~~l~~-ad~~l~~ 306 (392)
T cd03805 236 LKDKLAEFKNVRLVIAGGYDP----RVAENVEYLEELQRLAEELLLLEDQVIFLPS----ISDSQKELLLSS-ARALLYT 306 (392)
T ss_pred HHhhcccccCeEEEEEcCCCC----CCchhHHHHHHHHHHHHHhcCCCceEEEeCC----CChHHHHHHHhh-CeEEEEC
Confidence 98776 7999999999864 223344667889999999 999999999995 445788888887 9999999
Q ss_pred CCCCCCCHHHHHHHHcCCCEEecCCCCccceeecCceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Q 002909 675 ALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYE 754 (867)
Q Consensus 675 S~~EgfGltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~ 754 (867)
|..|+||++++|||+||+|||+|+.||..|++.++.+|+++++ |+++++++|.+++ +|++.+++|+++|++++.+
T Consensus 307 s~~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~----~~~~~~~~~~~~a~~~~~~ 381 (392)
T cd03805 307 PSNEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLA----NDPDLADRMGAAGRKRVKE 381 (392)
T ss_pred CCcCCCCchHHHHHHcCCCEEEECCCCcHHHhccCCceEEeCC-CHHHHHHHHHHHH----hChHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999976 8999999998888 8999999999999999999
Q ss_pred hCCHHHHHHHH
Q 002909 755 CYTWKIYANKV 765 (867)
Q Consensus 755 ~ysw~~~a~~l 765 (867)
+|||+.+++++
T Consensus 382 ~~s~~~~~~~~ 392 (392)
T cd03805 382 KFSTEAFAERL 392 (392)
T ss_pred hcCHHHHhhhC
Confidence 99999998764
No 25
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=100.00 E-value=4e-37 Score=346.12 Aligned_cols=364 Identities=16% Similarity=0.205 Sum_probs=262.8
Q ss_pred eEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCCCCCCCCCCCCccccccCC
Q 002909 282 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLIPNSKGTKCSQELEPIYDT 361 (867)
Q Consensus 282 rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~~~~~g~~~~~~~e~i~~~ 361 (867)
||+++..+. +.||++.++. .|++.|.+.||++. |++.... +. ...... .
T Consensus 3 ~il~ii~~~-----------~~GG~e~~~~--------~l~~~l~~~~~~~~----v~~~~~~---~~-~~~~~~----~ 51 (374)
T TIGR03088 3 LIVHVVYRF-----------DVGGLENGLV--------NLINHLPADRYRHA----VVALTEV---SA-FRKRIQ----R 51 (374)
T ss_pred eEEEEeCCC-----------CCCcHHHHHH--------HHHhhccccccceE----EEEcCCC---Ch-hHHHHH----h
Confidence 677776544 3699999999 45557777899988 7764211 11 111111 1
Q ss_pred CCeEEEEccCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEECCCChHHHHHHHHHhcCCcE-EEEEc
Q 002909 362 KHSHILRIPFKTEQAILPQWVSRFDIYPYLGRFAQDATAKILDLMEGKPDLIIGNYSDGNLVASLMASKLGITQ-ATIAH 440 (867)
Q Consensus 362 ~~v~I~rvp~~~~~~~l~~~isr~~i~p~l~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~l~a~lla~~~gip~-V~t~H 440 (867)
.++.+++++.... . .+ .+...+.+.+.+. +|||||+|...+ ..+.++++..++|. +++.|
T Consensus 52 ~~i~~~~~~~~~~--------~---~~----~~~~~l~~~l~~~---~~Divh~~~~~~-~~~~~~~~~~~~~~~i~~~h 112 (374)
T TIGR03088 52 PDVAFYALHKQPG--------K---DV----AVYPQLYRLLRQL---RPDIVHTRNLAA-LEAQLPAALAGVPARIHGEH 112 (374)
T ss_pred cCceEEEeCCCCC--------C---Ch----HHHHHHHHHHHHh---CCCEEEEcchhH-HHHHHHHHhcCCCeEEEeec
Confidence 2566777654321 0 01 1122344444443 899999997544 34455666778775 45555
Q ss_pred CCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHHHHhhcCCCCCccccccccccccceeeeccCCCCC
Q 002909 441 ALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFD 520 (867)
Q Consensus 441 ~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~ 520 (867)
+....... ...| .|.+ ..+.....+|.+|++|....+.+.+. .|++ .
T Consensus 113 ~~~~~~~~--~~~~-----~~~~-----~~~~~~~~~~~~i~vs~~~~~~~~~~-------------------~~~~--~ 159 (374)
T TIGR03088 113 GRDVFDLD--GSNW-----KYRW-----LRRLYRPLIHHYVAVSRDLEDWLRGP-------------------VKVP--P 159 (374)
T ss_pred Ccccccch--hhHH-----HHHH-----HHHHHHhcCCeEEEeCHHHHHHHHHh-------------------cCCC--h
Confidence 43221110 0011 1111 12335567899999998776532221 1233 6
Q ss_pred CcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccccccccccCCCCcEEEEEeccCCcCChHHHHHHHHHhH
Q 002909 521 PKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHIGYLADRKKPIIFSMARLDTVKNITGLTEWYGKNK 600 (867)
Q Consensus 521 ~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~ 600 (867)
.++.+|+||+|.+.|.+......... ..... .+++++|+++||+.+.||++.+++|+..+.
T Consensus 160 ~~~~vi~ngvd~~~~~~~~~~~~~~~-----------------~~~~~--~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~ 220 (374)
T TIGR03088 160 AKIHQIYNGVDTERFHPSRGDRSPIL-----------------PPDFF--ADESVVVGTVGRLQAVKDQPTLVRAFALLV 220 (374)
T ss_pred hhEEEeccCccccccCCCccchhhhh-----------------HhhcC--CCCCeEEEEEecCCcccCHHHHHHHHHHHH
Confidence 78999999999988876532211100 01111 456789999999999999999999999987
Q ss_pred ccCC----CeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccccCCCChHHHHHHHHccCcEEEEcCC
Q 002909 601 RLRN----MVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPAL 676 (867)
Q Consensus 601 ~~~~----~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~ 676 (867)
+..+ +++|+++|+|+. .+.+++.++++++.+++.|+|... ++..+++. +|++|+||.
T Consensus 221 ~~~~~~~~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~v~~~g~~~------~~~~~~~~-adi~v~pS~ 281 (374)
T TIGR03088 221 RQLPEGAERLRLVIVGDGPA------------RGACEQMVRAAGLAHLVWLPGERD------DVPALMQA-LDLFVLPSL 281 (374)
T ss_pred HhCcccccceEEEEecCCch------------HHHHHHHHHHcCCcceEEEcCCcC------CHHHHHHh-cCEEEeccc
Confidence 6544 789999999865 467888899999999999999533 56777776 999999999
Q ss_pred CCCCCHHHHHHHHcCCCEEecCCCCccceeecCceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhC
Q 002909 677 YEAFGLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECY 756 (867)
Q Consensus 677 ~EgfGltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~y 756 (867)
+||||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|..++ .|++.+.+++++|++++.++|
T Consensus 282 ~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~----~~~~~~~~~~~~a~~~~~~~f 357 (374)
T TIGR03088 282 AEGISNTILEAMASGLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYV----SDPAARRAHGAAGRARAEQQF 357 (374)
T ss_pred cccCchHHHHHHHcCCCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999999888 899999999999999999999
Q ss_pred CHHHHHHHHHHHHh
Q 002909 757 TWKIYANKVLNMGS 770 (867)
Q Consensus 757 sw~~~a~~ll~ly~ 770 (867)
||+.+++++.++|+
T Consensus 358 s~~~~~~~~~~~y~ 371 (374)
T TIGR03088 358 SINAMVAAYAGLYD 371 (374)
T ss_pred CHHHHHHHHHHHHH
Confidence 99999999999765
No 26
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=1.4e-35 Score=329.42 Aligned_cols=361 Identities=18% Similarity=0.189 Sum_probs=253.3
Q ss_pred eEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCCCCCCCCCCCCccccccCC
Q 002909 282 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLIPNSKGTKCSQELEPIYDT 361 (867)
Q Consensus 282 rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~~~~~g~~~~~~~e~i~~~ 361 (867)
||+|++.+++| |..||++.++. +|+++|.++||+|+ |+|...... .. ....
T Consensus 1 ~i~~i~~~~~~--------~~~gG~~~~~~--------~la~~L~~~g~~v~----v~~~~~~~~------~~---~~~~ 51 (363)
T cd04955 1 KIAIIGTRGIP--------AKYGGFETFVE--------ELAPRLVARGHEVT----VYCRSPYPK------QK---ETEY 51 (363)
T ss_pred CeEEEecCcCC--------cccCcHHHHHH--------HHHHHHHhcCCCEE----EEEccCCCC------Cc---cccc
Confidence 69999999887 35899999999 56667788999999 888743211 10 1122
Q ss_pred CCeEEEEccCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEECCCChHHHHHHHHHhcCCcEEEEEcC
Q 002909 362 KHSHILRIPFKTEQAILPQWVSRFDIYPYLGRFAQDATAKILDLMEGKPDLIIGNYSDGNLVASLMASKLGITQATIAHA 441 (867)
Q Consensus 362 ~~v~I~rvp~~~~~~~l~~~isr~~i~p~l~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~l~a~lla~~~gip~V~t~H~ 441 (867)
.++++.++|.....+ ...+.+ .+ ..+...+. ...++|+||...+.. ..+..++++.++|++++.|+
T Consensus 52 ~~i~~~~~~~~~~~~--------~~~~~~--~~-~~~~~~~~--~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~v~~~h~ 117 (363)
T cd04955 52 NGVRLIHIPAPEIGG--------LGTIIY--DI-LAILHALF--VKRDIDHVHALGPAI-APFLPLLRLKGKKVVVNMDG 117 (363)
T ss_pred CCceEEEcCCCCccc--------hhhhHH--HH-HHHHHHHh--ccCCeEEEEecCccH-HHHHHHHHhcCCCEEEEccC
Confidence 467888877543111 000000 00 01111111 134566666655544 33344456679999999998
Q ss_pred CcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHHHHhhcCCCCCccccccccccccceeeeccCCCCCC
Q 002909 442 LEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDP 521 (867)
Q Consensus 442 l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ 521 (867)
...... .|..... . .....+..+++.+|.|+++|+...+.++.. .|. +
T Consensus 118 ~~~~~~-----~~~~~~~--~--~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~-------------------~~~----~ 165 (363)
T cd04955 118 LEWKRA-----KWGRPAK--R--YLKFGEKLAVKFADRLIADSPGIKEYLKEK-------------------YGR----D 165 (363)
T ss_pred cceeec-----ccccchh--H--HHHHHHHHHHhhccEEEeCCHHHHHHHHHh-------------------cCC----C
Confidence 653321 1111110 0 112234557889999999998776633221 121 1
Q ss_pred cEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccccccccccCCCCcEEEEEeccCCcCChHHHHHHHHHhHc
Q 002909 522 KFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHIGYLADRKKPIIFSMARLDTVKNITGLTEWYGKNKR 601 (867)
Q Consensus 522 ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~ 601 (867)
. .+||||+|...+.+..... ..++. .+++.++++||+.+.||++.+++|+.++..
T Consensus 166 ~-~~i~ngv~~~~~~~~~~~~---------------------~~~~~---~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~ 220 (363)
T cd04955 166 S-TYIPYGADHVVSSEEDEIL---------------------KKYGL---EPGRYYLLVGRIVPENNIDDLIEAFSKSNS 220 (363)
T ss_pred C-eeeCCCcChhhcchhhhhH---------------------HhcCC---CCCcEEEEEecccccCCHHHHHHHHHhhcc
Confidence 2 8999999987665411110 12232 234568899999999999999999998754
Q ss_pred cCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHH-HcCCCCcEEEcccccCCCChHHHHHHHHccCcEEEEcCCC-CC
Q 002909 602 LRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIE-KYQLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALY-EA 679 (867)
Q Consensus 602 ~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~-~~~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~-Eg 679 (867)
+++|+|+|+++. ...+.+.++ .+++.++|+|+|+ ++.+++..+++. +|++++||.. |+
T Consensus 221 ---~~~l~ivG~~~~------------~~~~~~~~~~~~~~~~~V~~~g~----~~~~~~~~~~~~-ad~~v~ps~~~e~ 280 (363)
T cd04955 221 ---GKKLVIVGNADH------------NTPYGKLLKEKAAADPRIIFVGP----IYDQELLELLRY-AALFYLHGHSVGG 280 (363)
T ss_pred ---CceEEEEcCCCC------------cchHHHHHHHHhCCCCcEEEccc----cChHHHHHHHHh-CCEEEeCCccCCC
Confidence 799999999854 122333333 6778899999995 445789999987 9999999998 99
Q ss_pred CCHHHHHHHHcCCCEEecCCCCccceeecCceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHH
Q 002909 680 FGLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWK 759 (867)
Q Consensus 680 fGltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~ 759 (867)
||++++|||+||+|||+|+.|+..|++.+ +|++++++|. ++++|..++ +|++.+.++++++++.+.++|||+
T Consensus 281 ~~~~~~EAma~G~PvI~s~~~~~~e~~~~--~g~~~~~~~~--l~~~i~~l~----~~~~~~~~~~~~~~~~~~~~fs~~ 352 (363)
T cd04955 281 TNPSLLEAMAYGCPVLASDNPFNREVLGD--KAIYFKVGDD--LASLLEELE----ADPEEVSAMAKAARERIREKYTWE 352 (363)
T ss_pred CChHHHHHHHcCCCEEEecCCccceeecC--CeeEecCchH--HHHHHHHHH----hCHHHHHHHHHHHHHHHHHhCCHH
Confidence 99999999999999999999999999965 7999987775 899998887 899999999999999998899999
Q ss_pred HHHHHHHHHHh
Q 002909 760 IYANKVLNMGS 770 (867)
Q Consensus 760 ~~a~~ll~ly~ 770 (867)
.++++++++|+
T Consensus 353 ~~~~~~~~~y~ 363 (363)
T cd04955 353 KIADQYEELYK 363 (363)
T ss_pred HHHHHHHHHhC
Confidence 99999999763
No 27
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=100.00 E-value=2.4e-36 Score=360.39 Aligned_cols=457 Identities=11% Similarity=0.114 Sum_probs=290.7
Q ss_pred HHHHHHHHHHHHHHhccCCCCCChhHH-------HHHHhhcCCccccCCcHHHHHHHHHHHHHhhcCCChhhHHHHHhcC
Q 002909 205 VDKLQAALIAAEVSISDLPKDTPYQEF-------QQRFKEWGFEKGWGNTAERVRETMRLFSEALQAPDAAKLQVLFSRL 277 (867)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~l~~f~~r~ 277 (867)
.+.=..++++|.+..+.=. .-|.+. ..-+|.+|=|----++--|+.-|-+++...-+-- +...+ -.
T Consensus 204 ~~~A~~~~~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~ 276 (694)
T PRK15179 204 LWRARDVLQAGLDAIGDGA--RKLTRRLVDLNADLAALRRLGVEGDGRDVPVSILVLEKMLQEIGRRR-NAEYD----AG 276 (694)
T ss_pred HHHHHHHHHHHHHhhCcch--HHHHHHHHHHHHHHHHHHHcCcccccCCCceeeeeHHHHHHHHhhcC-ccccc----CC
Confidence 3444456666655544333 122222 1246777776555556667776666665543210 11000 11
Q ss_pred C-Ccc-eEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCC------------ceeeccEEEecCC
Q 002909 278 P-NMF-NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGL------------SVKPQILVVTRLI 343 (867)
Q Consensus 278 p-m~~-rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~Gh------------eV~~~V~VvT~~~ 343 (867)
| ... ||+++.... ..||.+++++++|. +|..+|. ++. |++++...
T Consensus 277 ~~~~~~rIl~vi~sl-----------~~GGAEr~~~~La~--------~l~~~~~~~~~~~g~g~~~~~~--V~~~~~~~ 335 (694)
T PRK15179 277 PESFVGPVLMINGSL-----------GAGGAERQFVNTAV--------ALQSAIQQGQSIAGYGVLGPVQ--VVCRSLRS 335 (694)
T ss_pred CCCCcceEEEEeCCC-----------CCCcHHHHHHHHHH--------HHHhcccCcccccCccCCCCcE--EEEEeccc
Confidence 2 134 788887544 36999999995555 5666643 233 33443211
Q ss_pred CCCCCC-CCCCccccccCCCCeEEEEccCCCcccccc-----cccccc--cchhhHHHHHHHHHHHHHHHcCCCCeEEEE
Q 002909 344 PNSKGT-KCSQELEPIYDTKHSHILRIPFKTEQAILP-----QWVSRF--DIYPYLGRFAQDATAKILDLMEGKPDLIIG 415 (867)
Q Consensus 344 ~~~~g~-~~~~~~e~i~~~~~v~I~rvp~~~~~~~l~-----~~isr~--~i~p~l~~f~~~~~~~i~~~l~~kPDIIh~ 415 (867)
..|. .+...+.. .|+.+..++.....+... ..+++. .+-.....+...+.+.+.+ .+|||||+
T Consensus 336 --~~g~~~~~~~L~~----~Gv~v~~l~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~L~~~lk~---~kpDIVH~ 406 (694)
T PRK15179 336 --REGADFFAATLAD----AGIPVSVYSDMQAWGGCEFSSLLAPYREYLRFLPKQIIEGTTKLTDVMRS---SVPSVVHI 406 (694)
T ss_pred --ccCcchHHHHHHh----CCCeEEEeccCCccCcccccccchhhHHHhhhcchhHHHHHHHHHHHHHH---cCCcEEEE
Confidence 1111 11111211 255566554432111000 000000 0000111223344444444 48999999
Q ss_pred CCCChHHHHHHHHHhcCCcEEE-EEcCCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHHHHhhcCCC
Q 002909 416 NYSDGNLVASLMASKLGITQAT-IAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQEIAGSKDR 494 (867)
Q Consensus 416 h~~~~~l~a~lla~~~gip~V~-t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~~~~~~k~~ 494 (867)
|.+.+++++.++++..++|+|+ +.|++...... . .|. ..|. .....+....++.+|++|....+.+.+
T Consensus 407 h~~~a~~lg~lAa~~~gvPvIv~t~h~~~~~~~~--~-~~~---~~~~----~l~~~l~~~~~~i~Vs~S~~~~~~l~~- 475 (694)
T PRK15179 407 WQDGSIFACALAALLAGVPRIVLSVRTMPPVDRP--D-RYR---VEYD----IIYSELLKMRGVALSSNSQFAAHRYAD- 475 (694)
T ss_pred eCCcHHHHHHHHHHHcCCCEEEEEeCCCccccch--h-HHH---HHHH----HHHHHHHhcCCeEEEeCcHHHHHHHHH-
Confidence 9998888888888889999876 56765322111 0 010 0011 111112223445667777655431111
Q ss_pred CCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccccccccccCCCC
Q 002909 495 PGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHIGYLADRKK 574 (867)
Q Consensus 495 ~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~lGll~~~~k 574 (867)
..|++ ..++.|||||||...|.+..........+ ..+. +++.
T Consensus 476 ------------------~~g~~--~~kI~VI~NGVd~~~f~~~~~~~~~~~~~----------------~~~~--~~~~ 517 (694)
T PRK15179 476 ------------------WLGVD--ERRIPVVYNGLAPLKSVQDDACTAMMAQF----------------DART--SDAR 517 (694)
T ss_pred ------------------HcCCC--hhHEEEECCCcCHHhcCCCchhhHHHHhh----------------cccc--CCCC
Confidence 12344 67999999999988776533221110000 0111 3456
Q ss_pred cEEEEEeccCCcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccccCC
Q 002909 575 PIIFSMARLDTVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTDR 654 (867)
Q Consensus 575 ~iIl~vGRL~~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d~ 654 (867)
++|+++||+.+.||++.+++|+.++.+..++++|+|+|+|+. .++++++++++++.++|+|+|++.
T Consensus 518 ~vIg~VGRL~~~KG~~~LI~A~a~l~~~~p~~~LvIvG~G~~------------~~~L~~l~~~lgL~~~V~flG~~~-- 583 (694)
T PRK15179 518 FTVGTVMRVDDNKRPFLWVEAAQRFAASHPKVRFIMVGGGPL------------LESVREFAQRLGMGERILFTGLSR-- 583 (694)
T ss_pred eEEEEEEeCCccCCHHHHHHHHHHHHHHCcCeEEEEEccCcc------------hHHHHHHHHHcCCCCcEEEcCCcc--
Confidence 789999999999999999999999988889999999999865 577899999999999999999754
Q ss_pred CChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCCccceeecCceEEEeCCCCH--HHHHHHHHHHHH
Q 002909 655 YRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDPNNG--DESSNKIADFFE 732 (867)
Q Consensus 655 v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~p~d~--e~lA~aI~~ll~ 732 (867)
++..+|.. +|+||+||.+|+||++++|||+||+|||+|+.||+.|+|.++.+|++++++|. ++++++|.+++.
T Consensus 584 ----dv~~ll~a-aDv~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~ 658 (694)
T PRK15179 584 ----RVGYWLTQ-FNAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLTLPADTVTAPDVAEALARIHD 658 (694)
T ss_pred ----hHHHHHHh-cCEEEeccccccchHHHHHHHHcCCeEEEECCCChHHHccCCCCEEEeCCCCCChHHHHHHHHHHHh
Confidence 46667776 99999999999999999999999999999999999999999999999998875 689999988884
Q ss_pred HhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Q 002909 733 KCKTDAGYWNQMSAAGRQRIYECYTWKIYANKVLNMGS 770 (867)
Q Consensus 733 ~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll~ly~ 770 (867)
.+..+ ..+++++++++.++|||+.++++++++|+
T Consensus 659 ~l~~~----~~l~~~ar~~a~~~FS~~~~~~~~~~lY~ 692 (694)
T PRK15179 659 MCAAD----PGIARKAADWASARFSLNQMIASTVRCYQ 692 (694)
T ss_pred Chhcc----HHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 33334 45778999999999999999999999874
No 28
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=100.00 E-value=4.5e-36 Score=334.99 Aligned_cols=280 Identities=20% Similarity=0.287 Sum_probs=229.9
Q ss_pred CCCeEEEECCCChHHHHHHHHHhcCCcEEEEEcCCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHHH
Q 002909 408 GKPDLIIGNYSDGNLVASLMASKLGITQATIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQE 487 (867)
Q Consensus 408 ~kPDIIh~h~~~~~l~a~lla~~~gip~V~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~~ 487 (867)
.+||+||+|....+..+..++++.|+|++++.|+.......... ... .+. .....+...++.+|.|+++|+..
T Consensus 81 ~~~dvvh~~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~----~~~-~~~--~~~~~~~~~~~~~d~ii~~s~~~ 153 (367)
T cd05844 81 HRPDLVHAHFGFDGVYALPLARRLGVPLVVTFHGFDATTSLALL----LRS-RWA--LYARRRRRLARRAALFIAVSQFI 153 (367)
T ss_pred hCCCEEEeccCchHHHHHHHHHHcCCCEEEEEeCccccccchhh----ccc-chh--HHHHHHHHHHHhcCEEEECCHHH
Confidence 48999999987777778888899999999999975432211100 000 011 11122445778999999999877
Q ss_pred HhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccccccc
Q 002909 488 IAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHIG 567 (867)
Q Consensus 488 ~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~lG 567 (867)
++.+.+ .|++ ..++.+++||+|.+.|.+...
T Consensus 154 ~~~~~~--------------------~~~~--~~~i~vi~~g~d~~~~~~~~~--------------------------- 184 (367)
T cd05844 154 RDRLLA--------------------LGFP--PEKVHVHPIGVDTAKFTPATP--------------------------- 184 (367)
T ss_pred HHHHHH--------------------cCCC--HHHeEEecCCCCHHhcCCCCC---------------------------
Confidence 653221 1333 678999999999877755311
Q ss_pred cccCCCCcEEEEEeccCCcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEE
Q 002909 568 YLADRKKPIIFSMARLDTVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRW 647 (867)
Q Consensus 568 ll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~f 647 (867)
..+++.++++|++.+.||++.+++|+..+.+..++++|+|+|+++. .+.++++++++++.++|+|
T Consensus 185 ---~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~ivG~g~~------------~~~~~~~~~~~~~~~~v~~ 249 (367)
T cd05844 185 ---ARRPPRILFVGRFVEKKGPLLLLEAFARLARRVPEVRLVIIGDGPL------------LAALEALARALGLGGRVTF 249 (367)
T ss_pred ---CCCCcEEEEEEeeccccChHHHHHHHHHHHHhCCCeEEEEEeCchH------------HHHHHHHHHHcCCCCeEEE
Confidence 2356789999999999999999999999988788999999998754 4678888999999999999
Q ss_pred cccccCCCChHHHHHHHHccCcEEEEcCC------CCCCCHHHHHHHHcCCCEEecCCCCccceeecCceEEEeCCCCHH
Q 002909 648 IAAQTDRYRNGELYRCIADTKGAFVQPAL------YEAFGLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDPNNGD 721 (867)
Q Consensus 648 lG~~~d~v~~~el~~~la~~aDvfV~PS~------~EgfGltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~p~d~e 721 (867)
+|+ ++.+++..+++. +|++|+||. .|+||++++|||+||+|||+|+.||..|++.++.+|++++++|++
T Consensus 250 ~g~----~~~~~l~~~~~~-ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g~~~~~~d~~ 324 (367)
T cd05844 250 LGA----QPHAEVRELMRR-ARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLVPEGDVA 324 (367)
T ss_pred CCC----CCHHHHHHHHHh-CCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecCCeeEEECCCCHH
Confidence 995 556799999987 999999997 599999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 002909 722 ESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKVLN 767 (867)
Q Consensus 722 ~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll~ 767 (867)
+++++|.+++ +|++.+.+|+.++++++.++|||+.+++++.+
T Consensus 325 ~l~~~i~~l~----~~~~~~~~~~~~a~~~~~~~~s~~~~~~~l~~ 366 (367)
T cd05844 325 ALAAALGRLL----ADPDLRARMGAAGRRRVEERFDLRRQTAKLEA 366 (367)
T ss_pred HHHHHHHHHH----cCHHHHHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 9999999988 89999999999999999999999999999875
No 29
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=100.00 E-value=4.6e-35 Score=322.21 Aligned_cols=372 Identities=18% Similarity=0.182 Sum_probs=262.3
Q ss_pred eEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCCCCCCCCCCCCccccccCC
Q 002909 282 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLIPNSKGTKCSQELEPIYDT 361 (867)
Q Consensus 282 rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~~~~~g~~~~~~~e~i~~~ 361 (867)
||++++++.+| ..||.+.++. +|++.|.++||+|+ +++...... . ......
T Consensus 1 kIl~i~~~~~~---------~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~-----~-~~~~~~-- 51 (375)
T cd03821 1 KILHVIPSFDP---------KYGGPVRVVL--------NLSKALAKLGHEVT----VATTDAGGD-----P-LLVALN-- 51 (375)
T ss_pred CeEEEcCCCCc---------ccCCeehHHH--------HHHHHHHhcCCcEE----EEecCCCCc-----c-chhhcc--
Confidence 68999877654 6899999998 56667788999999 888642210 0 000000
Q ss_pred CCeEEEEccCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEECCCC--hHHHHHHHHHhcCCcEEEEE
Q 002909 362 KHSHILRIPFKTEQAILPQWVSRFDIYPYLGRFAQDATAKILDLMEGKPDLIIGNYSD--GNLVASLMASKLGITQATIA 439 (867)
Q Consensus 362 ~~v~I~rvp~~~~~~~l~~~isr~~i~p~l~~f~~~~~~~i~~~l~~kPDIIh~h~~~--~~l~a~lla~~~gip~V~t~ 439 (867)
+........... ....+.. ..+.......+. ....+||+||+|... ....+..++++.++|++++.
T Consensus 52 -~~~~~~~~~~~~--~~~~~~~--------~~~~~~~~~~~~-~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 119 (375)
T cd03821 52 -GVPVKLFSINVA--YGLNLAR--------YLFPPSLLAWLR-LNIREADIVHVHGLWSYPSLAAARAARKYGIPYVVSP 119 (375)
T ss_pred -Cceeeecccchh--hhhhhhh--------hccChhHHHHHH-HhCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEc
Confidence 100000000000 0000000 001111111121 224689999999743 24456666778899999999
Q ss_pred cCCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHHHHhhcCCCCCccccccccccccceeeeccCCCC
Q 002909 440 HALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVF 519 (867)
Q Consensus 440 H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~ 519 (867)
|+.......... .+ .+....+..+...++.++.++++|......... +. .
T Consensus 120 ~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~---------------------~~--~ 169 (375)
T cd03821 120 HGMLDPWALPHK-AL------KKRLAWFLFERRLLQAAAAVHATSEQEAAEIRR---------------------LG--L 169 (375)
T ss_pred cccccccccccc-hh------hhHHHHHHHHHHHHhcCCEEEECCHHHHHHHHh---------------------hC--C
Confidence 986433221000 01 011112233455788999999999766542211 11 1
Q ss_pred CCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccccccccccCCCCcEEEEEeccCCcCChHHHHHHHHHh
Q 002909 520 DPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHIGYLADRKKPIIFSMARLDTVKNITGLTEWYGKN 599 (867)
Q Consensus 520 ~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l 599 (867)
..++.+||||+|.+.+.+......+ ..++. .+++++|+++||+.+.||++.+++++..+
T Consensus 170 ~~~~~vi~~~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~l 228 (375)
T cd03821 170 KAPIAVIPNGVDIPPFAALPSRGRR-------------------RKFPI--LPDKRIILFLGRLHPKKGLDLLIEAFAKL 228 (375)
T ss_pred cccEEEcCCCcChhccCcchhhhhh-------------------hhccC--CCCCcEEEEEeCcchhcCHHHHHHHHHHh
Confidence 5689999999999887665432211 22333 56788999999999999999999999999
Q ss_pred HccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCC
Q 002909 600 KRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEA 679 (867)
Q Consensus 600 ~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~Eg 679 (867)
.+.+++++|+++|.+.. .+...++.+++++++.++|.|+|++ +.+++..++.. ||++|+||..|+
T Consensus 229 ~~~~~~~~l~i~G~~~~----------~~~~~~~~~~~~~~~~~~v~~~g~~----~~~~~~~~~~~-adv~v~ps~~e~ 293 (375)
T cd03821 229 AERFPDWHLVIAGPDEG----------GYRAELKQIAAALGLEDRVTFTGML----YGEDKAAALAD-ADLFVLPSHSEN 293 (375)
T ss_pred hhhcCCeEEEEECCCCc----------chHHHHHHHHHhcCccceEEEcCCC----ChHHHHHHHhh-CCEEEeccccCC
Confidence 88888999999998765 2345556667889999999999964 45789999987 999999999999
Q ss_pred CCHHHHHHHHcCCCEEecCCCCccceeecCceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHH
Q 002909 680 FGLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWK 759 (867)
Q Consensus 680 fGltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~ 759 (867)
||++++|||+||+|||+|+.||..|++.+ .+|+++++ +.++++++|.+++ +|++.++++++++++.+.++|||+
T Consensus 294 ~~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~~ 367 (375)
T cd03821 294 FGIVVAEALACGTPVVTTDKVPWQELIEY-GCGWVVDD-DVDALAAALRRAL----ELPQRLKAMGENGRALVEERFSWT 367 (375)
T ss_pred CCcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceEEeCC-ChHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhcCHH
Confidence 99999999999999999999999999988 78998865 5599999998888 899999999999999999999999
Q ss_pred HHHHHHH
Q 002909 760 IYANKVL 766 (867)
Q Consensus 760 ~~a~~ll 766 (867)
.++++++
T Consensus 368 ~~~~~~~ 374 (375)
T cd03821 368 AIAQQLL 374 (375)
T ss_pred HHHHHhh
Confidence 9999876
No 30
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=100.00 E-value=3.4e-36 Score=319.02 Aligned_cols=362 Identities=18% Similarity=0.205 Sum_probs=276.1
Q ss_pred ceEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCCCCCCCCCCCCccccccC
Q 002909 281 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLIPNSKGTKCSQELEPIYD 360 (867)
Q Consensus 281 ~rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~~~~~g~~~~~~~e~i~~ 360 (867)
++|++||++.|| .+||.+.++- .|++.|.+.||.|. |+|..+.+..| -..-
T Consensus 1 ~~i~mVsdff~P---------~~ggveshiy--------~lSq~li~lghkVv----vithayg~r~g--------iryl 51 (426)
T KOG1111|consen 1 SRILMVSDFFYP---------STGGVESHIY--------ALSQCLIRLGHKVV----VITHAYGNRVG--------IRYL 51 (426)
T ss_pred CcceeeCccccc---------CCCChhhhHH--------HhhcchhhcCCeEE----EEeccccCccc--------eeee
Confidence 579999999997 6899999999 78889999999998 99987544222 2233
Q ss_pred CCCeEEEEccCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEECCCChHHH--HHHHHHhcCCcEEEE
Q 002909 361 TKHSHILRIPFKTEQAILPQWVSRFDIYPYLGRFAQDATAKILDLMEGKPDLIIGNYSDGNLV--ASLMASKLGITQATI 438 (867)
Q Consensus 361 ~~~v~I~rvp~~~~~~~l~~~isr~~i~p~l~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~l~--a~lla~~~gip~V~t 438 (867)
+++.+++.+|+... .+....|.+-..+.-+...+++ ++..|||+|.+.+.+. +.+.++.+|...|+|
T Consensus 52 t~glkVyylp~~v~--------~n~tT~ptv~~~~Pllr~i~lr---E~I~ivhghs~fS~lahe~l~hartMGlktVfT 120 (426)
T KOG1111|consen 52 TNGLKVYYLPAVVG--------YNQTTFPTVFSDFPLLRPILLR---ERIEIVHGHSPFSYLAHEALMHARTMGLKTVFT 120 (426)
T ss_pred cCCceEEEEeeeee--------ecccchhhhhccCcccchhhhh---hceEEEecCChHHHHHHHHHHHHHhcCceEEEe
Confidence 45788888887642 1111122211111112223333 3889999999877553 777789999999999
Q ss_pred EcCCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHHHHhhcCCCCCccccccccccccceeeeccCCC
Q 002909 439 AHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINV 518 (867)
Q Consensus 439 ~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~ 518 (867)
-|+++...-..+.. ..+. +++ ++...|.+||+|+.-++. -.+...++
T Consensus 121 dHSlfGfad~~si~----~n~l----l~~-----sL~~id~~IcVshtsken-------------------tvlr~~L~- 167 (426)
T KOG1111|consen 121 DHSLFGFADIGSIL----TNKL----LPL-----SLANIDRIICVSHTSKEN-------------------TVLRGALA- 167 (426)
T ss_pred ccccccccchhhhh----hcce----eee-----eecCCCcEEEEeecCCCc-------------------eEEEeccC-
Confidence 99976544322221 1111 122 678899999999643331 11222344
Q ss_pred CCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccccccccccCCCCcEEEEEeccCCcCChHHHHHHHHH
Q 002909 519 FDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHIGYLADRKKPIIFSMARLDTVKNITGLTEWYGK 598 (867)
Q Consensus 519 ~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~ 598 (867)
..|+.+|||.++.+.|.|...... ..+...|+.++||...||+|.|++++++
T Consensus 168 -p~kvsvIPnAv~~~~f~P~~~~~~---------------------------S~~i~~ivv~sRLvyrKGiDll~~iIp~ 219 (426)
T KOG1111|consen 168 -PAKVSVIPNAVVTHTFTPDAADKP---------------------------SADIITIVVASRLVYRKGIDLLLEIIPS 219 (426)
T ss_pred -HhHeeeccceeeccccccCccccC---------------------------CCCeeEEEEEeeeeeccchHHHHHHHHH
Confidence 779999999999999999654310 2344679999999999999999999999
Q ss_pred hHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCC
Q 002909 599 NKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYE 678 (867)
Q Consensus 599 l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E 678 (867)
+.+.+|+++++|+|+||. ...+++..+++.+.++|.++| .++.+++.+.+.. .|+|+.||..|
T Consensus 220 vc~~~p~vrfii~GDGPk------------~i~lee~lEk~~l~~rV~~lG----~v~h~~Vr~vl~~-G~IFlntSlTE 282 (426)
T KOG1111|consen 220 VCDKHPEVRFIIIGDGPK------------RIDLEEMLEKLFLQDRVVMLG----TVPHDRVRDVLVR-GDIFLNTSLTE 282 (426)
T ss_pred HHhcCCCeeEEEecCCcc------------cchHHHHHHHhhccCceEEec----ccchHHHHHHHhc-CcEEeccHHHH
Confidence 999999999999999987 466888889999999999999 5677899999997 99999999999
Q ss_pred CCCHHHHHHHHcCCCEEecCCCCccceeecCceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCH
Q 002909 679 AFGLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTW 758 (867)
Q Consensus 679 gfGltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw 758 (867)
+||++++|||+||+|||+|++||.+|++.++ -.......++++++++.+.+.++...|. ..-+++.+.|+|
T Consensus 283 afc~~ivEAaScGL~VVsTrVGGIpeVLP~d--~i~~~~~~~~dl~~~v~~ai~~~~~~p~-------~~h~~v~~~y~w 353 (426)
T KOG1111|consen 283 AFCMVIVEAASCGLPVVSTRVGGIPEVLPED--MITLGEPGPDDLVGAVEKAITKLRTLPL-------EFHDRVKKMYSW 353 (426)
T ss_pred HHHHHHHHHHhCCCEEEEeecCCccccCCcc--ceeccCCChHHHHHHHHHHHHHhccCch-------hHHHHHHHhccH
Confidence 9999999999999999999999999999654 2334556899999999999977776654 234567788999
Q ss_pred HHHHHHHHHHH
Q 002909 759 KIYANKVLNMG 769 (867)
Q Consensus 759 ~~~a~~ll~ly 769 (867)
+..+++.+.+|
T Consensus 354 ~dVa~rTekvy 364 (426)
T KOG1111|consen 354 KDVAERTEKVY 364 (426)
T ss_pred HHHHHHHHHHH
Confidence 99999999964
No 31
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=100.00 E-value=1.8e-35 Score=327.86 Aligned_cols=347 Identities=19% Similarity=0.233 Sum_probs=259.9
Q ss_pred CcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCCCCCCCCCCCCccccccCCCCeEEEEccCCCcccccccc
Q 002909 302 DTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLIPNSKGTKCSQELEPIYDTKHSHILRIPFKTEQAILPQW 381 (867)
Q Consensus 302 dtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~l~~~ 381 (867)
+.||.++++. +|+++|+++||+|. +++...+ .....+ ..+++++++++...+.
T Consensus 8 ~~gG~e~~~~--------~l~~~L~~~g~~v~----v~~~~~~------~~~~~~----~~~~~~~~~~~~~~~~----- 60 (355)
T cd03819 8 ESGGVERGTL--------ELARALVERGHRSL----VASAGGR------LVAELE----AEGSRHIKLPFISKNP----- 60 (355)
T ss_pred ccCcHHHHHH--------HHHHHHHHcCCEEE----EEcCCCc------hHHHHH----hcCCeEEEccccccch-----
Confidence 3599999999 56667888999999 8876311 111111 2255666666543211
Q ss_pred cccccchhhHHHHHHHHHHHHHHHcCCCCeEEEECCCChHHHHHHHHHhcCCcEEEEEcCCcccccccchhhhhhcCccc
Q 002909 382 VSRFDIYPYLGRFAQDATAKILDLMEGKPDLIIGNYSDGNLVASLMASKLGITQATIAHALEKSKYEDSDAKWKELDPKY 461 (867)
Q Consensus 382 isr~~i~p~l~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~l~a~lla~~~gip~V~t~H~l~~~~~~~s~~~~~~~~~~y 461 (867)
+..+ .+...+.+.+.+ .+||+||+|.....+.+.++++..++|++++.|+......
T Consensus 61 ------~~~~-~~~~~l~~~~~~---~~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~-------------- 116 (355)
T cd03819 61 ------LRIL-LNVARLRRLIRE---EKVDIVHARSRAPAWSAYLAARRTRPPFVTTVHGFYSVNF-------------- 116 (355)
T ss_pred ------hhhH-HHHHHHHHHHHH---cCCCEEEECCCchhHHHHHHHHhcCCCEEEEeCCchhhHH--------------
Confidence 1111 122233333433 4899999998777777777888889999999998543321
Q ss_pred cchhhhhHHHHHHhcCCEEEecCHHHHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchH
Q 002909 462 HFSCQFTADLIAMNQTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEK 541 (867)
Q Consensus 462 ~f~~~~~~e~ial~~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~ 541 (867)
.....+..+|.++++|+...+.+.+ ..|++ ..++.+||||+|...|.+....
T Consensus 117 -------~~~~~~~~~~~vi~~s~~~~~~~~~-------------------~~~~~--~~k~~~i~ngi~~~~~~~~~~~ 168 (355)
T cd03819 117 -------RYNAIMARGDRVIAVSNFIADHIRE-------------------NYGVD--PDRIRVIPRGVDLDRFDPGAVP 168 (355)
T ss_pred -------HHHHHHHhcCEEEEeCHHHHHHHHH-------------------hcCCC--hhhEEEecCCccccccCccccc
Confidence 0112467899999999877653321 12333 6789999999999887654322
Q ss_pred hhhhccCCcchHHhhhcccccccccccccCCCCcEEEEEeccCCcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCC
Q 002909 542 QKRLTSFHPDIEELLYSKEDNSEHIGYLADRKKPIIFSMARLDTVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSH 621 (867)
Q Consensus 542 ~~r~~~~~~~i~~~l~~~~~~~~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~ 621 (867)
...... .++.++. ++++++++++||+.+.||++.+++++..+.+..++++++|+|++..
T Consensus 169 ~~~~~~--------------~~~~~~~--~~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~ivG~~~~----- 227 (355)
T cd03819 169 PERILA--------------LAREWPL--PKGKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLIVGDAQG----- 227 (355)
T ss_pred hHHHHH--------------HHHHcCC--CCCceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEEEECCcc-----
Confidence 111000 0123344 5678899999999999999999999999988778999999999865
Q ss_pred ChHHHHHHHHHHHHHHHcCCCCcEEEcccccCCCChHHHHHHHHccCcEEEEcC-CCCCCCHHHHHHHHcCCCEEecCCC
Q 002909 622 DREEIAEIKKMHTLIEKYQLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPA-LYEAFGLTVIEAMNCGLPTFATNQG 700 (867)
Q Consensus 622 d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS-~~EgfGltvlEAMa~GlPVIat~~g 700 (867)
+..+.+.+.+.++++++.++|.|+|+ .+++..+++. +|++++|| ..|+||++++|||+||+|||+++.|
T Consensus 228 ---~~~~~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~l~~-ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~ 297 (355)
T cd03819 228 ---RRFYYAELLELIKRLGLQDRVTFVGH------CSDMPAAYAL-ADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHG 297 (355)
T ss_pred ---cchHHHHHHHHHHHcCCcceEEEcCC------cccHHHHHHh-CCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCC
Confidence 11344556678888899899999997 2367888887 99999999 8999999999999999999999999
Q ss_pred CccceeecCceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHH
Q 002909 701 GPAEIIIDGVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIY 761 (867)
Q Consensus 701 G~~EiI~dg~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~ 761 (867)
|..|++.++.+|++++++|+++++++|..++. .+++.+.+++++|++.+.++|||+.+
T Consensus 298 ~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~---~~~~~~~~~~~~a~~~~~~~f~~~~~ 355 (355)
T cd03819 298 GARETVRPGETGLLVPPGDAEALAQALDQILS---LLPEGRAKMFAKARMCVETLFSYDRM 355 (355)
T ss_pred CcHHHHhCCCceEEeCCCCHHHHHHHHHHHHh---hCHHHHHHHHHHHHHHHHHhhhhccC
Confidence 99999999999999999999999999976653 68999999999999999999999853
No 32
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=100.00 E-value=3.7e-35 Score=330.68 Aligned_cols=286 Identities=21% Similarity=0.216 Sum_probs=213.4
Q ss_pred CCCCeEEEECCCChHHHHHHHHHhcCCcEEEEEcCCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHH
Q 002909 407 EGKPDLIIGNYSDGNLVASLMASKLGITQATIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQ 486 (867)
Q Consensus 407 ~~kPDIIh~h~~~~~l~a~lla~~~gip~V~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~ 486 (867)
..+|||||+|.+....+ ..+.+..++|+|++.|+...... ...| .+ ....++.+|.+++.|.+
T Consensus 83 ~~~~Dvv~~h~~~~~~~-~~~~~~~~~~~i~~~H~~~~~~~---~~~~-------~~------~~~~~~~~d~~i~~~~~ 145 (372)
T cd03792 83 DLDADVVVIHDPQPLAL-PLFKKKRGRPWIWRCHIDLSSPN---RRVW-------DF------LQPYIEDYDAAVFHLPE 145 (372)
T ss_pred cCCCCEEEECCCCchhH-HHhhhcCCCeEEEEeeeecCCCc---HHHH-------HH------HHHHHHhCCEEeecHHH
Confidence 35899999998765322 22233348999999997432110 1111 11 12256789999988843
Q ss_pred HHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCC--CCchHhhhhccCCcchHHhhhccccccc
Q 002909 487 EIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYF--PYTEKQKRLTSFHPDIEELLYSKEDNSE 564 (867)
Q Consensus 487 ~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~--p~~~~~~r~~~~~~~i~~~l~~~~~~~~ 564 (867)
.+. .+++ ..++ +||||+|..... +....... ..++
T Consensus 146 ~~~------------------------~~~~--~~~~-vipngvd~~~~~~~~~~~~~~~----------------~~~~ 182 (372)
T cd03792 146 YVP------------------------PQVP--PRKV-IIPPSIDPLSGKNRELSPADIE----------------YILE 182 (372)
T ss_pred hcC------------------------CCCC--CceE-EeCCCCCCCccccCCCCHHHHH----------------HHHH
Confidence 221 1122 3455 999999975321 11111110 0113
Q ss_pred ccccccCCCCcEEEEEeccCCcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCc
Q 002909 565 HIGYLADRKKPIIFSMARLDTVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQ 644 (867)
Q Consensus 565 ~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~ 644 (867)
.+|+ ++++++|+++||+++.||++.+++|+..+.+..++++|+|+|+|+. .+++. .+.++++.+..++.++
T Consensus 183 ~~~~--~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~----~~~~~---~~~~~~~~~~~~~~~~ 253 (372)
T cd03792 183 KYGI--DPERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQLVLVGSGAT----DDPEG---WIVYEEVLEYAEGDPD 253 (372)
T ss_pred HhCC--CCCCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCEEEEEeCCCC----CCchh---HHHHHHHHHHhCCCCC
Confidence 4666 6788999999999999999999999999988778999999999864 11222 2234455556778889
Q ss_pred EEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCCccceeecCceEEEeCCCCHHHHH
Q 002909 645 FRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDPNNGDESS 724 (867)
Q Consensus 645 V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~p~d~e~lA 724 (867)
|.|+|... ++.+++..+++. +|+|++||.+|+||++++|||+||+|||+|+.||..+++.++.+|++++ ++++++
T Consensus 254 v~~~~~~~--~~~~~~~~~~~~-ad~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~~~g~~~~--~~~~~a 328 (372)
T cd03792 254 IHVLTLPP--VSDLEVNALQRA-STVVLQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLVD--TVEEAA 328 (372)
T ss_pred eEEEecCC--CCHHHHHHHHHh-CeEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCCchhhcccCCceEEeC--CcHHHH
Confidence 99999642 245788888886 9999999999999999999999999999999999999999999999987 567888
Q ss_pred HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Q 002909 725 NKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKVLNMGS 770 (867)
Q Consensus 725 ~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll~ly~ 770 (867)
++|.+++ .|++.+++|++++++.+.++|||+.++++++++|+
T Consensus 329 ~~i~~ll----~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~ 370 (372)
T cd03792 329 VRILYLL----RDPELRRKMGANAREHVRENFLITRHLKDYLYLIS 370 (372)
T ss_pred HHHHHHH----cCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 8998887 89999999999999999999999999999999765
No 33
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=100.00 E-value=1.6e-35 Score=339.05 Aligned_cols=395 Identities=16% Similarity=0.135 Sum_probs=263.4
Q ss_pred CcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCCCCCCCCCCCCccccccCCCCeEEEEccCCCccc-----
Q 002909 302 DTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLIPNSKGTKCSQELEPIYDTKHSHILRIPFKTEQA----- 376 (867)
Q Consensus 302 dtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~----- 376 (867)
..||.++.+..+|-++.....+.=+-.|+.|.-.|-++|+.+....|..+--..-.-.+++...+-+++-..+..
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (578)
T PRK15490 172 GSGGAERQISRLAIEIARKYRQKGKIGGLKVEEPVELIIRSLTPELRQDFFLKEVLEEQVEVLEIAKITGNLFDDATIES 251 (578)
T ss_pred CCCchHHHHHHHHHHHHHHHHhcccccccccccceeEEEeecCcccCcchhHHHHHhcCCceEEeeccchhhhhhccccc
Confidence 359999999988775544333333334566666666999987665554333221111344455555555222111
Q ss_pred -ccccccccccchhhHHHHH-HHHHHHHHHHcCCCCeEEEECCCChHHHHHHHHHhcCCcEEE-EEcCCcccccccchhh
Q 002909 377 -ILPQWVSRFDIYPYLGRFA-QDATAKILDLMEGKPDLIIGNYSDGNLVASLMASKLGITQAT-IAHALEKSKYEDSDAK 453 (867)
Q Consensus 377 -~l~~~isr~~i~p~l~~f~-~~~~~~i~~~l~~kPDIIh~h~~~~~l~a~lla~~~gip~V~-t~H~l~~~~~~~s~~~ 453 (867)
+++.+++.. -|. ..+. ..+...+++ .+|||||+|...+++.+.++++..|+|+++ +.|+..... ....
T Consensus 252 ~~~~~~~~~~--~~~-~~~~~~~l~~~ir~---~rpDIVHt~~~~a~l~g~laA~lagvpviv~~~h~~~~~~--~~r~- 322 (578)
T PRK15490 252 PELRLLLSHL--PPV-CKYGIKHLVPHLCE---RKLDYLSVWQDGACLMIALAALIAGVPRIQLGLRGLPPVV--RKRL- 322 (578)
T ss_pred hHHHHHHhcC--ChH-HHHHHHHHHHHHHH---cCCCEEEEcCcccHHHHHHHHHhcCCCEEEEeecccCCcc--hhhH-
Confidence 112121110 010 1111 122333333 599999999988778888888889999965 466522111 0000
Q ss_pred hhhcCccccchhhhhHHHHHHhcCCEEEecCHHHHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCC
Q 002909 454 WKELDPKYHFSCQFTADLIAMNQTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQS 533 (867)
Q Consensus 454 ~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~ 533 (867)
+...|..... .......+| +++.|....+.+.+ ..|++ ..|+.|||||+|..
T Consensus 323 ---~~~e~~~~~~---a~~i~~~sd-~v~~s~~v~~~l~~-------------------~lgip--~~KI~VIyNGVD~~ 374 (578)
T PRK15490 323 ---FKPEYEPLYQ---ALAVVPGVD-FMSNNHCVTRHYAD-------------------WLKLE--AKHFQVVYNGVLPP 374 (578)
T ss_pred ---HHHHHHHhhh---hceeEecch-hhhccHHHHHHHHH-------------------HhCCC--HHHEEEEeCCcchh
Confidence 0000000000 000122334 44555443331111 11344 78999999999998
Q ss_pred CCCCCchHhhhhccCCcchHHhhhcccccccccccccCCCCcEEEEEeccCCcCChHHHHHHHHHhHccCCCeEEEEEeC
Q 002909 534 VYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHIGYLADRKKPIIFSMARLDTVKNITGLTEWYGKNKRLRNMVNLVVVAG 613 (867)
Q Consensus 534 ~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~~v~LvIVG~ 613 (867)
.|.|.......... ....++ +++.++|+++||+.+.||...+++++.++.+..++++|+|+|+
T Consensus 375 rf~p~~~~~~~~r~---------------~~~~~l--~~~~~vIg~VgRl~~~Kg~~~LI~A~a~llk~~pdirLvIVGd 437 (578)
T PRK15490 375 STEPSSEVPHKIWQ---------------QFTQKT--QDADTTIGGVFRFVGDKNPFAWIDFAARYLQHHPATRFVLVGD 437 (578)
T ss_pred hcCccchhhHHHHH---------------Hhhhcc--CCCCcEEEEEEEEehhcCHHHHHHHHHHHHhHCCCeEEEEEeC
Confidence 88775422110000 001233 4566899999999999999999999998887789999999999
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCC
Q 002909 614 FFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLP 693 (867)
Q Consensus 614 g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlP 693 (867)
|+. .++++++++++++.++|+|+|+.. ++..+|+. +|+||+||.+|+||++++|||+||+|
T Consensus 438 G~~------------~eeLk~la~elgL~d~V~FlG~~~------Dv~~~Laa-ADVfVlPS~~EGfp~vlLEAMA~GlP 498 (578)
T PRK15490 438 GDL------------RAEAQKRAEQLGILERILFVGASR------DVGYWLQK-MNVFILFSRYEGLPNVLIEAQMVGVP 498 (578)
T ss_pred chh------------HHHHHHHHHHcCCCCcEEECCChh------hHHHHHHh-CCEEEEcccccCccHHHHHHHHhCCC
Confidence 865 577899999999999999999743 56777776 99999999999999999999999999
Q ss_pred EEecCCCCccceeecCceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Q 002909 694 TFATNQGGPAEIIIDGVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKVLNMGS 770 (867)
Q Consensus 694 VIat~~gG~~EiI~dg~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll~ly~ 770 (867)
||+|+.||..|+|.++.+|++++++|++++++++..+ ..+..+.+.+..|+++|++++.++|||+.++++|.++|.
T Consensus 499 VVATdvGG~~EiV~dG~nG~LVp~~D~~aLa~ai~lA-~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~ 574 (578)
T PRK15490 499 VISTPAGGSAECFIEGVSGFILDDAQTVNLDQACRYA-EKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIA 574 (578)
T ss_pred EEEeCCCCcHHHcccCCcEEEECCCChhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999988876332 222245555667999999999999999999999999765
No 34
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=100.00 E-value=5.3e-34 Score=313.62 Aligned_cols=333 Identities=17% Similarity=0.159 Sum_probs=237.9
Q ss_pred ceEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCCCCCCCCCCCCccccccC
Q 002909 281 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLIPNSKGTKCSQELEPIYD 360 (867)
Q Consensus 281 ~rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~~~~~g~~~~~~~e~i~~ 360 (867)
|||+++++..+| .+.|..||.++++. +|++.|.++||+|+ +++...+.. ...
T Consensus 1 MkI~~i~~~~~~-----~~~~~~GG~~~~~~--------~l~~~L~~~g~~V~----v~~~~~~~~-----~~~------ 52 (335)
T cd03802 1 MRIALVAPPREP-----VPPPAYGGTERVVA--------ALTEGLVARGHEVT----LFASGDSKT-----AAP------ 52 (335)
T ss_pred CeEEEEcCCccc-----CCCcccCcHHHHHH--------HHHHHHHhcCceEE----EEecCCCCc-----ccc------
Confidence 799999987765 24457899999999 56667778999999 888742210 000
Q ss_pred CCCeEEEEccCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEECCCChHHHHHHHHHhcCCcEEEEEc
Q 002909 361 TKHSHILRIPFKTEQAILPQWVSRFDIYPYLGRFAQDATAKILDLMEGKPDLIIGNYSDGNLVASLMASKLGITQATIAH 440 (867)
Q Consensus 361 ~~~v~I~rvp~~~~~~~l~~~isr~~i~p~l~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~l~a~lla~~~gip~V~t~H 440 (867)
.......+.. ............+...+.+.+. ..+|||||+|.+..... +++..++|+|++.|
T Consensus 53 --~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~---~~~~Divh~~~~~~~~~---~~~~~~~~~v~~~h 115 (335)
T cd03802 53 --LVPVVPEPLR---------LDAPGRDRAEAEALALAERALA---AGDFDIVHNHSLHLPLP---FARPLPVPVVTTLH 115 (335)
T ss_pred --eeeccCCCcc---------cccchhhHhhHHHHHHHHHHHh---cCCCCEEEecCcccchh---hhcccCCCEEEEec
Confidence 0011111100 0000000111112222222222 35899999998777554 56788999999999
Q ss_pred CCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHHHHhhcCCCCCccccccccccccceeeeccCCCCC
Q 002909 441 ALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFD 520 (867)
Q Consensus 441 ~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~ 520 (867)
+....... + ........+.++++|....+... . .
T Consensus 116 ~~~~~~~~-----~---------------~~~~~~~~~~~~~~s~~~~~~~~------------------------~--~ 149 (335)
T cd03802 116 GPPDPELL-----K---------------LYYAARPDVPFVSISDAQRRPWP------------------------P--L 149 (335)
T ss_pred CCCCcccc-----h---------------HHHhhCcCCeEEEecHHHHhhcc------------------------c--c
Confidence 86543210 0 01245678889999976654111 0 1
Q ss_pred CcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccccccccccCCCCcEEEEEeccCCcCChHHHHHHHHHhH
Q 002909 521 PKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHIGYLADRKKPIIFSMARLDTVKNITGLTEWYGKNK 600 (867)
Q Consensus 521 ~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~ 600 (867)
.++.+||||+|.+.|.+. ..++..++++||+.+.||++.+++++.+
T Consensus 150 ~~~~vi~ngvd~~~~~~~--------------------------------~~~~~~i~~~Gr~~~~Kg~~~li~~~~~-- 195 (335)
T cd03802 150 PWVATVHNGIDLDDYPFR--------------------------------GPKGDYLLFLGRISPEKGPHLAIRAARR-- 195 (335)
T ss_pred cccEEecCCcChhhCCCC--------------------------------CCCCCEEEEEEeeccccCHHHHHHHHHh--
Confidence 478899999998877551 2356689999999999999999999764
Q ss_pred ccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcC-CCCcEEEcccccCCCChHHHHHHHHccCcEEEEcCC-CC
Q 002909 601 RLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQ-LQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPAL-YE 678 (867)
Q Consensus 601 ~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~-L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~-~E 678 (867)
.+++|+|+|++.. .+.+.....+.. +.++|.|+|+ ++..++..+++. +|++|+||. .|
T Consensus 196 ---~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~~v~~~G~----~~~~~~~~~~~~-~d~~v~ps~~~E 255 (335)
T cd03802 196 ---AGIPLKLAGPVSD------------PDYFYREIAPELLDGPDIEYLGE----VGGAEKAELLGN-ARALLFPILWEE 255 (335)
T ss_pred ---cCCeEEEEeCCCC------------HHHHHHHHHHhcccCCcEEEeCC----CCHHHHHHHHHh-CcEEEeCCcccC
Confidence 3689999999965 233334444433 5689999995 445788899987 999999997 59
Q ss_pred CCCHHHHHHHHcCCCEEecCCCCccceeecCceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCH
Q 002909 679 AFGLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTW 758 (867)
Q Consensus 679 gfGltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw 758 (867)
+||++++|||+||+|||+|+.||..|++.++.+|+++++ +++++++|.++. ..+ .+++++++.++|||
T Consensus 256 ~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~----~~~------~~~~~~~~~~~~s~ 323 (335)
T cd03802 256 PFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARAD----RLD------RAACRRRAERRFSA 323 (335)
T ss_pred CcchHHHHHHhcCCCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHh----ccH------HHHHHHHHHHhCCH
Confidence 999999999999999999999999999999999999985 999999998775 332 24677888899999
Q ss_pred HHHHHHHHHHHh
Q 002909 759 KIYANKVLNMGS 770 (867)
Q Consensus 759 ~~~a~~ll~ly~ 770 (867)
+.++++|+++|+
T Consensus 324 ~~~~~~~~~~y~ 335 (335)
T cd03802 324 ARMVDDYLALYR 335 (335)
T ss_pred HHHHHHHHHHhC
Confidence 999999999763
No 35
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=100.00 E-value=1.8e-33 Score=311.80 Aligned_cols=281 Identities=19% Similarity=0.260 Sum_probs=219.2
Q ss_pred CCCeEEEECCCChHHHHHHHHHh-cCCcEEEEEcCCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHH
Q 002909 408 GKPDLIIGNYSDGNLVASLMASK-LGITQATIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQ 486 (867)
Q Consensus 408 ~kPDIIh~h~~~~~l~a~lla~~-~gip~V~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~ 486 (867)
.+||+||+|....++.+.++... .++|++++.|+...... . ..+ ........++.++++|..
T Consensus 78 ~~pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~~------~------~~~-----~~~~~~~~~~~~~~~s~~ 140 (360)
T cd04951 78 FKPDVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGGR------L------RML-----AYRLTDFLSDLTTNVSKE 140 (360)
T ss_pred cCCCEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchhH------H------HHH-----HHHHHhhccCceEEEcHH
Confidence 48999999988776666655543 46788999997543210 0 000 111234457788888876
Q ss_pred HHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhccccccccc
Q 002909 487 EIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHI 566 (867)
Q Consensus 487 ~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~l 566 (867)
..+.+.+. .+++ ..++.+||||+|...|.+........ ++.+
T Consensus 141 ~~~~~~~~-------------------~~~~--~~~~~~i~ng~~~~~~~~~~~~~~~~-----------------~~~~ 182 (360)
T cd04951 141 ALDYFIAS-------------------KAFN--ANKSFVVYNGIDTDRFRKDPARRLKI-----------------RNAL 182 (360)
T ss_pred HHHHHHhc-------------------cCCC--cccEEEEccccchhhcCcchHHHHHH-----------------HHHc
Confidence 65422211 1122 67899999999988776653322211 1345
Q ss_pred ccccCCCCcEEEEEeccCCcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEE
Q 002909 567 GYLADRKKPIIFSMARLDTVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFR 646 (867)
Q Consensus 567 Gll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~ 646 (867)
++ .+++++++++||+.+.||++.+++++.++.+..++++|+|+|+|+. .+.+++.++++++.++|.
T Consensus 183 ~~--~~~~~~~l~~g~~~~~kg~~~li~a~~~l~~~~~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~v~ 248 (360)
T cd04951 183 GV--KNDTFVILAVGRLVEAKDYPNLLKAFAKLLSDYLDIKLLIAGDGPL------------RATLERLIKALGLSNRVK 248 (360)
T ss_pred Cc--CCCCEEEEEEeeCchhcCcHHHHHHHHHHHhhCCCeEEEEEcCCCc------------HHHHHHHHHhcCCCCcEE
Confidence 55 5678899999999999999999999999988778999999999876 466778888889989999
Q ss_pred EcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCCccceeecCceEEEeCCCCHHHHHHH
Q 002909 647 WIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDPNNGDESSNK 726 (867)
Q Consensus 647 flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~p~d~e~lA~a 726 (867)
|+|++. ++..++.. ||++++||..|+||++++|||+||+|||+++.|+..|++.+ +|+.++++|+++++++
T Consensus 249 ~~g~~~------~~~~~~~~-ad~~v~~s~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~--~g~~~~~~~~~~~~~~ 319 (360)
T cd04951 249 LLGLRD------DIAAYYNA-ADLFVLSSAWEGFGLVVAEAMACELPVVATDAGGVREVVGD--SGLIVPISDPEALANK 319 (360)
T ss_pred Eecccc------cHHHHHHh-hceEEecccccCCChHHHHHHHcCCCEEEecCCChhhEecC--CceEeCCCCHHHHHHH
Confidence 999643 46777776 99999999999999999999999999999999999999976 8999999999999999
Q ss_pred HHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Q 002909 727 IADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKVLNMGS 770 (867)
Q Consensus 727 I~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll~ly~ 770 (867)
|.++++ .+++.+..++.+ ++.+.++|||+.+++++.++|.
T Consensus 320 i~~ll~---~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~y~ 359 (360)
T cd04951 320 IDEILK---MSGEERDIIGAR-RERIVKKFSINSIVQQWLTLYT 359 (360)
T ss_pred HHHHHh---CCHHHHHHHHHH-HHHHHHhcCHHHHHHHHHHHhh
Confidence 998874 567777777777 8888999999999999999764
No 36
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=100.00 E-value=7.6e-34 Score=311.33 Aligned_cols=363 Identities=18% Similarity=0.176 Sum_probs=265.2
Q ss_pred eEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCCCCCCCCCCCCccccccCC
Q 002909 282 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLIPNSKGTKCSQELEPIYDT 361 (867)
Q Consensus 282 rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~~~~~g~~~~~~~e~i~~~ 361 (867)
||+++++... .||.++++. .|+++|.+.||+|. +++..... . ...... .
T Consensus 1 ~i~~i~~~~~-----------~gG~~~~~~--------~l~~~l~~~~~~v~----~~~~~~~~---~-~~~~~~----~ 49 (365)
T cd03807 1 KVLHVITGLD-----------VGGAERMLV--------RLLKGLDRDRFEHV----VISLTDRG---E-LGEELE----E 49 (365)
T ss_pred CeEEEEeecc-----------CccHHHHHH--------HHHHHhhhccceEE----EEecCcch---h-hhHHHH----h
Confidence 5778875443 499999998 56667878999999 77753211 0 111111 1
Q ss_pred CCeEEEEccCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEECCCChHHHHHHHHHh-cCCcEEEEEc
Q 002909 362 KHSHILRIPFKTEQAILPQWVSRFDIYPYLGRFAQDATAKILDLMEGKPDLIIGNYSDGNLVASLMASK-LGITQATIAH 440 (867)
Q Consensus 362 ~~v~I~rvp~~~~~~~l~~~isr~~i~p~l~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~l~a~lla~~-~gip~V~t~H 440 (867)
.++.+..++.... ...+ .+...+.+.+.+ .+||+||+|.......+.+.+.. .+++.+++.|
T Consensus 50 ~~i~v~~~~~~~~----------~~~~----~~~~~~~~~~~~---~~~div~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 112 (365)
T cd03807 50 AGVPVYCLGKRPG----------RPDP----GALLRLYKLIRR---LRPDVVHTWMYHADLYGGLAARLAGVPPVIWGIR 112 (365)
T ss_pred cCCeEEEEecccc----------cccH----HHHHHHHHHHHh---hCCCEEEeccccccHHHHHHHHhcCCCcEEEEec
Confidence 2555665554321 0111 112223333333 48999999977766666666665 7899999999
Q ss_pred CCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHHHHhhcCCCCCccccccccccccceeeeccCCCCC
Q 002909 441 ALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFD 520 (867)
Q Consensus 441 ~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~ 520 (867)
....... .|. ... .........+.+|.++++|....+.... .|++ .
T Consensus 113 ~~~~~~~-----~~~--~~~-----~~~~~~~~~~~~~~~i~~s~~~~~~~~~--------------------~~~~--~ 158 (365)
T cd03807 113 HSDLDLG-----KKS--TRL-----VARLRRLLSSFIPLIVANSAAAAEYHQA--------------------IGYP--P 158 (365)
T ss_pred CCccccc-----chh--HhH-----HHHHHHHhccccCeEEeccHHHHHHHHH--------------------cCCC--h
Confidence 8654421 010 000 1112334567899999999876652221 1333 6
Q ss_pred CcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccccccccccCCCCcEEEEEeccCCcCChHHHHHHHHHhH
Q 002909 521 PKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHIGYLADRKKPIIFSMARLDTVKNITGLTEWYGKNK 600 (867)
Q Consensus 521 ~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~ 600 (867)
.++.+++||+|...+.+........ ++.+|+ ++++++|+++||+.+.||++.+++++..+.
T Consensus 159 ~~~~vi~~~~~~~~~~~~~~~~~~~-----------------~~~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~l~ 219 (365)
T cd03807 159 KKIVVIPNGVDTERFSPDLDARARL-----------------REELGL--PEDTFLIGIVARLHPQKDHATLLRAAALLL 219 (365)
T ss_pred hheeEeCCCcCHHhcCCcccchHHH-----------------HHhcCC--CCCCeEEEEecccchhcCHHHHHHHHHHHH
Confidence 7899999999988776654322111 134555 667889999999999999999999999998
Q ss_pred ccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHH-HcCCCCcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCC
Q 002909 601 RLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIE-KYQLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEA 679 (867)
Q Consensus 601 ~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~-~~~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~Eg 679 (867)
+..++++|+|+|.+.. ......... ++++.++|.|+|.. +++..+++. ||++++||.+|+
T Consensus 220 ~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-adi~v~ps~~e~ 280 (365)
T cd03807 220 KKFPNARLLLVGDGPD------------RANLELLALKELGLEDKVILLGER------SDVPALLNA-LDVFVLSSLSEG 280 (365)
T ss_pred HhCCCeEEEEecCCcc------------hhHHHHHHHHhcCCCceEEEcccc------ccHHHHHHh-CCEEEeCCcccc
Confidence 8788999999999865 233444444 78888999999953 356777776 999999999999
Q ss_pred CCHHHHHHHHcCCCEEecCCCCccceeecCceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHH
Q 002909 680 FGLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWK 759 (867)
Q Consensus 680 fGltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~ 759 (867)
||++++|||+||+|||+++.||..|++.+ +|++++++|+++++++|.+++ +|++.+.++++++++.+.++|||+
T Consensus 281 ~~~~~~Ea~a~g~PvI~~~~~~~~e~~~~--~g~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~~ 354 (365)
T cd03807 281 FPNVLLEAMACGLPVVATDVGDNAELVGD--TGFLVPPGDPEALAEAIEALL----ADPALRQALGEAARERIEENFSIE 354 (365)
T ss_pred CCcHHHHHHhcCCCEEEcCCCChHHHhhc--CCEEeCCCCHHHHHHHHHHHH----hChHHHHHHHHHHHHHHHHhCCHH
Confidence 99999999999999999999999999977 899999999999999999988 889999999999999999999999
Q ss_pred HHHHHHHHHHh
Q 002909 760 IYANKVLNMGS 770 (867)
Q Consensus 760 ~~a~~ll~ly~ 770 (867)
.+++++.++|+
T Consensus 355 ~~~~~~~~~y~ 365 (365)
T cd03807 355 AMVEAYEELYR 365 (365)
T ss_pred HHHHHHHHHhC
Confidence 99999999763
No 37
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=100.00 E-value=1.7e-33 Score=311.43 Aligned_cols=271 Identities=21% Similarity=0.264 Sum_probs=223.0
Q ss_pred CCCeEEEECCCCh-HHHHHHHHHhcCCcEEEEEcCCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHH
Q 002909 408 GKPDLIIGNYSDG-NLVASLMASKLGITQATIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQ 486 (867)
Q Consensus 408 ~kPDIIh~h~~~~-~l~a~lla~~~gip~V~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~ 486 (867)
.+||+||+|+... ...+.+.++..++|++++.|+......... ......++.+|.++++|+.
T Consensus 78 ~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~vi~~s~~ 140 (355)
T cd03799 78 LGIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRSPDA-----------------IDLDEKLARADFVVAISEY 140 (355)
T ss_pred cCCCEEEECCCCchHHHHHHHHHhcCCCEEEEEecccccccCch-----------------HHHHHHHhhCCEEEECCHH
Confidence 5899999998644 445555555668999999996432211000 1233467899999999998
Q ss_pred HHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhccccccccc
Q 002909 487 EIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHI 566 (867)
Q Consensus 487 ~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~l 566 (867)
.++.++... |.+ ..++.+||||+|.+.+.+....
T Consensus 141 ~~~~l~~~~-------------------~~~--~~~~~vi~~~~d~~~~~~~~~~------------------------- 174 (355)
T cd03799 141 NRQQLIRLL-------------------GCD--PDKIHVVHCGVDLERFPPRPPP------------------------- 174 (355)
T ss_pred HHHHHHHhc-------------------CCC--cccEEEEeCCcCHHHcCCcccc-------------------------
Confidence 776433321 222 6789999999998777554200
Q ss_pred ccccCCCCcEEEEEeccCCcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEE
Q 002909 567 GYLADRKKPIIFSMARLDTVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFR 646 (867)
Q Consensus 567 Gll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~ 646 (867)
...+++.|+++|++.+.||++.+++++..+.+..++++++++|+++. .+.+.+.++++++.++|+
T Consensus 175 ---~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v~ 239 (355)
T cd03799 175 ---PPGEPLRILSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGDGPL------------RDELEALIAELGLEDRVT 239 (355)
T ss_pred ---ccCCCeEEEEEeeeccccCHHHHHHHHHHHhhcCCCeEEEEEECCcc------------HHHHHHHHHHcCCCCeEE
Confidence 03466789999999999999999999999988778999999999866 467888888999999999
Q ss_pred EcccccCCCChHHHHHHHHccCcEEEEcCCC------CCCCHHHHHHHHcCCCEEecCCCCccceeecCceEEEeCCCCH
Q 002909 647 WIAAQTDRYRNGELYRCIADTKGAFVQPALY------EAFGLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDPNNG 720 (867)
Q Consensus 647 flG~~~d~v~~~el~~~la~~aDvfV~PS~~------EgfGltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~p~d~ 720 (867)
|.|+ ++.+++..+++. +|++++||.. |+||++++|||+||+|||+++.|+..|++.++.+|++++++|.
T Consensus 240 ~~g~----~~~~~l~~~~~~-adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~~g~~~~~~~~ 314 (355)
T cd03799 240 LLGA----KSQEEVRELLRA-ADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLLVPPGDP 314 (355)
T ss_pred ECCc----CChHHHHHHHHh-CCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCCCceEEeCCCCH
Confidence 9995 446799999997 9999999998 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 002909 721 DESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKV 765 (867)
Q Consensus 721 e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~l 765 (867)
++++++|.+++ .|++.+.+|++++++.+.++|||+..++++
T Consensus 315 ~~l~~~i~~~~----~~~~~~~~~~~~a~~~~~~~~s~~~~~~~l 355 (355)
T cd03799 315 EALADAIERLL----DDPELRREMGEAGRARVEEEFDIRKQAARL 355 (355)
T ss_pred HHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhcCHHHHhhcC
Confidence 99999999988 899999999999999999999999988753
No 38
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=2.3e-33 Score=310.63 Aligned_cols=354 Identities=19% Similarity=0.190 Sum_probs=254.9
Q ss_pred eEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCCCCCCCCCCCCccccccCC
Q 002909 282 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLIPNSKGTKCSQELEPIYDT 361 (867)
Q Consensus 282 rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~~~~~g~~~~~~~e~i~~~ 361 (867)
||+++++.++| +.||.+.++. +|+++|.++||+|+ |++...... ..... .
T Consensus 1 kil~i~~~~~p---------~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~------~~~~~---~ 50 (357)
T cd03795 1 RVLHVGKFYPP---------DRGGIEQVIR--------DLAEGLAARGIEVA----VLCASPEPK------GRDEE---R 50 (357)
T ss_pred CeeEecCCCCC---------CCCcHHHHHH--------HHHHHHHhCCCceE----EEecCCCCc------chhhh---c
Confidence 68999876664 5899999998 66668888999999 887642221 11111 1
Q ss_pred CCeEEEEccCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEECCCChHHHHHHHHHhcCCcEEEEEcC
Q 002909 362 KHSHILRIPFKTEQAILPQWVSRFDIYPYLGRFAQDATAKILDLMEGKPDLIIGNYSDGNLVASLMASKLGITQATIAHA 441 (867)
Q Consensus 362 ~~v~I~rvp~~~~~~~l~~~isr~~i~p~l~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~l~a~lla~~~gip~V~t~H~ 441 (867)
.+..+.+++..... ...+... .+...+. ....+||+||+|++.............++|.+++.|+
T Consensus 51 ~~~~~~~~~~~~~~----------~~~~~~~----~~~~~~~-~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 115 (357)
T cd03795 51 NGHRVIRAPSLLNV----------ASTPFSP----SFFKQLK-KLAKKADVIHLHFPNPLADLALLLLPRKKPVVVHWHS 115 (357)
T ss_pred cCceEEEeeccccc----------ccccccH----HHHHHHH-hcCCCCCEEEEecCcchHHHHHHHhccCceEEEEEcC
Confidence 23455555432210 0000000 1111111 2246899999998665333333333368999999996
Q ss_pred CcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHHHHhhcCCCCCccccccccccccceeeeccCCCCCC
Q 002909 442 LEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDP 521 (867)
Q Consensus 442 l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ 521 (867)
...... . ....++ ..+...++.+|.|+++|+...+..... + .+..
T Consensus 116 ~~~~~~----~----~~~~~~-----~~~~~~~~~~d~vi~~s~~~~~~~~~~--------------------~--~~~~ 160 (357)
T cd03795 116 DIVKQK----L----LLKLYR-----PLQRRFLRRADAIVATSPNYAETSPVL--------------------R--RFRD 160 (357)
T ss_pred hhhccc----h----hhhhhh-----HHHHHHHHhcCEEEeCcHHHHHHHHHh--------------------c--CCcc
Confidence 322110 0 001111 123347899999999998765422111 0 0135
Q ss_pred cEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccccccccccCCCCcEEEEEeccCCcCChHHHHHHHHHhHc
Q 002909 522 KFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHIGYLADRKKPIIFSMARLDTVKNITGLTEWYGKNKR 601 (867)
Q Consensus 522 ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~ 601 (867)
++.+||||+|.+.+.+...... ..... ..++++|+++||+.+.||++.+++|+.++.
T Consensus 161 ~~~~i~~gi~~~~~~~~~~~~~--------------------~~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~l~- 217 (357)
T cd03795 161 KVRVIPLGLDPARYPRPDALEE--------------------AIWRR--AAGRPFFLFVGRLVYYKGLDVLLEAAAALP- 217 (357)
T ss_pred ceEEecCCCChhhcCCcchhhh--------------------HhhcC--CCCCcEEEEecccccccCHHHHHHHHHhcc-
Confidence 7899999999887765432210 00111 457789999999999999999999999885
Q ss_pred cCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccccCCCChHHHHHHHHccCcEEEEcCC--CCC
Q 002909 602 LRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPAL--YEA 679 (867)
Q Consensus 602 ~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~--~Eg 679 (867)
+++|+|+|+|+. .+.+.+.++++++.++|.|+|+ ++..++..+++. ||++++||. .|+
T Consensus 218 ---~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~V~~~g~----v~~~~~~~~~~~-ad~~i~ps~~~~e~ 277 (357)
T cd03795 218 ---DAPLVIVGEGPL------------EAELEALAAALGLLDRVRFLGR----LDDEEKAALLAA-CDVFVFPSVERSEA 277 (357)
T ss_pred ---CcEEEEEeCChh------------HHHHHHHHHhcCCcceEEEcCC----CCHHHHHHHHHh-CCEEEeCCcccccc
Confidence 799999999865 4667888888999999999995 456788999987 999999996 599
Q ss_pred CCHHHHHHHHcCCCEEecCCCCccceeec-CceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCH
Q 002909 680 FGLTVIEAMNCGLPTFATNQGGPAEIIID-GVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTW 758 (867)
Q Consensus 680 fGltvlEAMa~GlPVIat~~gG~~EiI~d-g~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw 758 (867)
||++++|||+||+|||+|+.|+..+.+.+ +.+|++++++|+++++++|.+++ +|++.+++|+++|++.+.++|||
T Consensus 278 ~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~ 353 (357)
T cd03795 278 FGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLL----EDPELRERLGEAARERAEEEFTA 353 (357)
T ss_pred cchHHHHHHHcCCCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHHHHhcch
Confidence 99999999999999999999999998886 89999999999999999999998 89999999999999999999999
Q ss_pred HHHH
Q 002909 759 KIYA 762 (867)
Q Consensus 759 ~~~a 762 (867)
+.++
T Consensus 354 ~~~~ 357 (357)
T cd03795 354 DRMV 357 (357)
T ss_pred HhhC
Confidence 9764
No 39
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=1.5e-34 Score=336.76 Aligned_cols=290 Identities=18% Similarity=0.244 Sum_probs=233.0
Q ss_pred CCCeEEEECCC-ChHHHHHHHHHhcCCcEEEEEcCCccccc----ccchhhhhh--cCcc-ccchhhhhHHHHHHhcCCE
Q 002909 408 GKPDLIIGNYS-DGNLVASLMASKLGITQATIAHALEKSKY----EDSDAKWKE--LDPK-YHFSCQFTADLIAMNQTDF 479 (867)
Q Consensus 408 ~kPDIIh~h~~-~~~l~a~lla~~~gip~V~t~H~l~~~~~----~~s~~~~~~--~~~~-y~f~~~~~~e~ial~~aD~ 479 (867)
.++||||+|.. .+++.+.+++++.|+|+|+|.|+...... .... |.. +... .++. ...+..+++.||.
T Consensus 172 ~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~--~~~~~~~~~~~~~~--~~l~~~~~~~ad~ 247 (475)
T cd03813 172 PKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQAD--WEMSYFRRLWIRFF--ESLGRLAYQAADR 247 (475)
T ss_pred CCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcc--cchHHHHHHHHHHH--HHHHHHHHHhCCE
Confidence 57899999964 34677888889999999999999643210 0000 000 0000 0111 1234568899999
Q ss_pred EEecCHHHHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcc
Q 002909 480 IITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSK 559 (867)
Q Consensus 480 IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~ 559 (867)
|+++|....+... ..|++ .+|+.|||||+|.+.|.+....
T Consensus 248 Ii~~s~~~~~~~~--------------------~~g~~--~~ki~vIpNgid~~~f~~~~~~------------------ 287 (475)
T cd03813 248 ITTLYEGNRERQI--------------------EDGAD--PEKIRVIPNGIDPERFAPARRA------------------ 287 (475)
T ss_pred EEecCHHHHHHHH--------------------HcCCC--HHHeEEeCCCcCHHHcCCcccc------------------
Confidence 9999986654211 12444 6799999999999887664321
Q ss_pred cccccccccccCCCCcEEEEEeccCCcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHc
Q 002909 560 EDNSEHIGYLADRKKPIIFSMARLDTVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKY 639 (867)
Q Consensus 560 ~~~~~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~ 639 (867)
+. .+++++|+++||+.+.||++.+++|+..+.+..++++|+|+|+++. ...+.++++++++++
T Consensus 288 -------~~--~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~~l~IvG~g~~--------~~~~~~e~~~li~~l 350 (475)
T cd03813 288 -------RP--EKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDAEGWVIGPTDE--------DPEYAEECRELVESL 350 (475)
T ss_pred -------cc--CCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEECCCCc--------ChHHHHHHHHHHHHh
Confidence 00 4567899999999999999999999999988889999999999853 125667889999999
Q ss_pred CCCCcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCCccceeec------CceEE
Q 002909 640 QLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIID------GVSGF 713 (867)
Q Consensus 640 ~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG~~EiI~d------g~~G~ 713 (867)
++.++|+|+| . .++..+++. +|++|+||..|+||++++|||+||+|||+|+.||..|++.+ |.+|+
T Consensus 351 ~l~~~V~f~G-~------~~v~~~l~~-aDv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~~~g~~G~ 422 (475)
T cd03813 351 GLEDNVKFTG-F------QNVKEYLPK-LDVLVLTSISEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGE 422 (475)
T ss_pred CCCCeEEEcC-C------ccHHHHHHh-CCEEEeCchhhcCChHHHHHHHcCCCEEECCCCChHHHhcCCcccccCCceE
Confidence 9999999999 2 246667776 99999999999999999999999999999999999999988 67999
Q ss_pred EeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Q 002909 714 HIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKVLNMGS 770 (867)
Q Consensus 714 lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll~ly~ 770 (867)
+++++|+++++++|.+++ .|++.+++|+++|++++.+.|+|+.++++|.++|+
T Consensus 423 lv~~~d~~~la~ai~~ll----~~~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~lY~ 475 (475)
T cd03813 423 VVPPADPEALARAILRLL----KDPELRRAMGEAGRKRVERYYTLERMIDSYRRLYL 475 (475)
T ss_pred EECCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 999999999999999988 89999999999999999999999999999999773
No 40
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=100.00 E-value=2.4e-33 Score=309.65 Aligned_cols=387 Identities=17% Similarity=0.191 Sum_probs=272.1
Q ss_pred eEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCCCCCCCCCCCCccccccCC
Q 002909 282 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLIPNSKGTKCSQELEPIYDT 361 (867)
Q Consensus 282 rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~~~~~g~~~~~~~e~i~~~ 361 (867)
||++++.+.+| ..||...++. .+++.|+++||+|+ +++............. ......
T Consensus 1 kIl~i~~~~~~---------~~~G~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~~~~~~~--~~~~~~ 57 (394)
T cd03794 1 KILILSQYFPP---------ELGGGAFRTT--------ELAEELVKRGHEVT----VITGSPNYPSGKIYKG--YKREEV 57 (394)
T ss_pred CEEEEecccCC---------ccCCcceeHH--------HHHHHHHhCCceEE----EEecCCCccccccccc--ceEEec
Confidence 68999977664 4588889998 56667778999999 8886432211110000 001123
Q ss_pred CCeEEEEccCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEECCCC--hHHHHHHHHHhcCCcEEEEE
Q 002909 362 KHSHILRIPFKTEQAILPQWVSRFDIYPYLGRFAQDATAKILDLMEGKPDLIIGNYSD--GNLVASLMASKLGITQATIA 439 (867)
Q Consensus 362 ~~v~I~rvp~~~~~~~l~~~isr~~i~p~l~~f~~~~~~~i~~~l~~kPDIIh~h~~~--~~l~a~lla~~~gip~V~t~ 439 (867)
.++++.+++...... ..++.+ +..+ ..|.......+.. ...+||+||++.+. ....+..+++..++|++++.
T Consensus 58 ~~~~~~~~~~~~~~~--~~~~~~--~~~~-~~~~~~~~~~~~~-~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 131 (394)
T cd03794 58 DGVRVHRVPLPPYKK--NGLLKR--LLNY-LSFALSALLALLK-RRRRPDVIIATSPPLLIALAALLLARLKGAPFVLEV 131 (394)
T ss_pred CCeEEEEEecCCCCc--cchHHH--HHhh-hHHHHHHHHHHHh-cccCCCEEEEcCChHHHHHHHHHHHHhcCCCEEEEe
Confidence 467777776544221 001010 1111 1233333333331 24689999999733 24455666677799999999
Q ss_pred cCCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHHHHhhcCCCCCccccccccccccceeeeccCCCC
Q 002909 440 HALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVF 519 (867)
Q Consensus 440 H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~ 519 (867)
|+.+............. ...+. .....+...++.+|.++++|....+.+.. .+++
T Consensus 132 h~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~d~vi~~s~~~~~~~~~--------------------~~~~-- 186 (394)
T cd03794 132 RDLWPESAVALGLLKNG-SLLYR--LLRKLERLIYRRADAIVVISPGMREYLVR--------------------RGVP-- 186 (394)
T ss_pred hhhcchhHHHccCcccc-chHHH--HHHHHHHHHHhcCCEEEEECHHHHHHHHh--------------------cCCC--
Confidence 98765432111100000 00001 11123555789999999999887763321 1223
Q ss_pred CCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccccccccccCCCCcEEEEEeccCCcCChHHHHHHHHHh
Q 002909 520 DPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHIGYLADRKKPIIFSMARLDTVKNITGLTEWYGKN 599 (867)
Q Consensus 520 ~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l 599 (867)
..++.+||||+|...+.+......+ ...+. ..+++.|+++|++.+.||++.+++++..+
T Consensus 187 ~~~~~~i~~~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~G~~~~~k~~~~l~~~~~~l 245 (394)
T cd03794 187 PEKISVIPNGVDLELFKPPPADESL-------------------RKELG--LDDKFVVLYAGNIGRAQGLDTLLEAAALL 245 (394)
T ss_pred cCceEEcCCCCCHHHcCCccchhhh-------------------hhccC--CCCcEEEEEecCcccccCHHHHHHHHHHH
Confidence 6789999999998777665432211 11122 45778999999999999999999999999
Q ss_pred HccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCC
Q 002909 600 KRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEA 679 (867)
Q Consensus 600 ~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~Eg 679 (867)
.+. ++++|+|+|++.. .+.+.+.+...++ ++|.|+|+ ++.+++..++.. +|++++|+..|+
T Consensus 246 ~~~-~~~~l~i~G~~~~------------~~~~~~~~~~~~~-~~v~~~g~----~~~~~~~~~~~~-~di~i~~~~~~~ 306 (394)
T cd03794 246 KDR-PDIRFLIVGDGPE------------KEELKELAKALGL-DNVTFLGR----VPKEELPELLAA-ADVGLVPLKPGP 306 (394)
T ss_pred hhc-CCeEEEEeCCccc------------HHHHHHHHHHcCC-CcEEEeCC----CChHHHHHHHHh-hCeeEEeccCcc
Confidence 876 7899999999865 4556666666665 68999994 556789999987 999999999887
Q ss_pred C-----CHHHHHHHHcCCCEEecCCCCccceeecCceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Q 002909 680 F-----GLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYE 754 (867)
Q Consensus 680 f-----GltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~ 754 (867)
+ |++++|||+||+|||+++.+|..+++.++.+|++++++|+++++++|.+++ .|++.+++|++++++.+.+
T Consensus 307 ~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~----~~~~~~~~~~~~~~~~~~~ 382 (394)
T cd03794 307 AFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELL----DDPEERAEMGENGRRYVEE 382 (394)
T ss_pred cccccCchHHHHHHHCCCcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHHHH----hChHHHHHHHHHHHHHHHH
Confidence 5 788999999999999999999999999989999999999999999999988 8999999999999999988
Q ss_pred hCCHHHHHHHHH
Q 002909 755 CYTWKIYANKVL 766 (867)
Q Consensus 755 ~ysw~~~a~~ll 766 (867)
+|||+.++++++
T Consensus 383 ~~s~~~~~~~~~ 394 (394)
T cd03794 383 KFSREKLAERLL 394 (394)
T ss_pred hhcHHHHHHhcC
Confidence 999999998763
No 41
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=100.00 E-value=6.5e-33 Score=302.23 Aligned_cols=373 Identities=23% Similarity=0.309 Sum_probs=271.8
Q ss_pred eEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCCCCCCCCCCCCccccccCC
Q 002909 282 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLIPNSKGTKCSQELEPIYDT 361 (867)
Q Consensus 282 rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~~~~~g~~~~~~~e~i~~~ 361 (867)
||+++++...| ..||...++. .|++.|.+.||+|. +++......... ....
T Consensus 1 kI~ii~~~~~~---------~~~G~~~~~~--------~l~~~L~~~g~~v~----i~~~~~~~~~~~------~~~~-- 51 (374)
T cd03801 1 KILLVTPEYPP---------SVGGAERHVL--------ELARALAARGHEVT----VLTPGDGGLPDE------EEVG-- 51 (374)
T ss_pred CeeEEecccCC---------ccCcHhHHHH--------HHHHHHHhcCceEE----EEecCCCCCCce------eeec--
Confidence 68999877654 3588889988 56667777999999 888753221110 0000
Q ss_pred CCeEEEEccCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEECCCChHHHHHHHHHhcCCcEEEEEcC
Q 002909 362 KHSHILRIPFKTEQAILPQWVSRFDIYPYLGRFAQDATAKILDLMEGKPDLIIGNYSDGNLVASLMASKLGITQATIAHA 441 (867)
Q Consensus 362 ~~v~I~rvp~~~~~~~l~~~isr~~i~p~l~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~l~a~lla~~~gip~V~t~H~ 441 (867)
........... ..........+...+.+.+.. .+||+||++.+.........++..++|++++.|+
T Consensus 52 -~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~---~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 117 (374)
T cd03801 52 -GIVVVRPPPLL----------RVRRLLLLLLLALRLRRLLRR---ERFDVVHAHDWLALLAAALAARLLGIPLVLTVHG 117 (374)
T ss_pred -CcceecCCccc----------ccchhHHHHHHHHHHHHHhhh---cCCcEEEEechhHHHHHHHHHHhcCCcEEEEecc
Confidence 00000000000 000111111222222332322 4899999998877655557778899999999998
Q ss_pred CcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHHHHhhcCCCCCccccccccccccceeeeccCCCCCC
Q 002909 442 LEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDP 521 (867)
Q Consensus 442 l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ 521 (867)
......... ...............++.+|.+++.|....+.+.+.. +.+ ..
T Consensus 118 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~~-------------------~~~--~~ 168 (374)
T cd03801 118 LEFGRPGNE--------LGLLLKLARALERRALRRADRIIAVSEATREELRELG-------------------GVP--PE 168 (374)
T ss_pred chhhccccc--------hhHHHHHHHHHHHHHHHhCCEEEEecHHHHHHHHhcC-------------------CCC--CC
Confidence 765442211 0000111122344578999999999987766333221 111 35
Q ss_pred cEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccccccccccCCCCcEEEEEeccCCcCChHHHHHHHHHhHc
Q 002909 522 KFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHIGYLADRKKPIIFSMARLDTVKNITGLTEWYGKNKR 601 (867)
Q Consensus 522 ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~ 601 (867)
++.++|||+|...+.+.. ...+ ...+. ..+++.|+++|++.+.||++.+++++..+.+
T Consensus 169 ~~~~i~~~~~~~~~~~~~-~~~~-------------------~~~~~--~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~ 226 (374)
T cd03801 169 KITVIPNGVDTERFRPAP-RAAR-------------------RRLGI--PEDEPVILFVGRLVPRKGVDLLLEALAKLRK 226 (374)
T ss_pred cEEEecCcccccccCccc-hHHH-------------------hhcCC--cCCCeEEEEecchhhhcCHHHHHHHHHHHhh
Confidence 899999999988776543 1111 11111 4567899999999999999999999999988
Q ss_pred cCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCC
Q 002909 602 LRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFG 681 (867)
Q Consensus 602 ~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfG 681 (867)
..++++|+++|++.. ...+++.++++++.++|.|+|+. +.+++..++.. ||++++|+..|++|
T Consensus 227 ~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~g~~----~~~~~~~~~~~-~di~i~~~~~~~~~ 289 (374)
T cd03801 227 EYPDVRLVIVGDGPL------------REELEALAAELGLGDRVTFLGFV----PDEDLPALYAA-ADVFVLPSLYEGFG 289 (374)
T ss_pred hcCCeEEEEEeCcHH------------HHHHHHHHHHhCCCcceEEEecc----ChhhHHHHHHh-cCEEEecchhcccc
Confidence 778999999997744 56777888888999999999954 45788998887 99999999999999
Q ss_pred HHHHHHHHcCCCEEecCCCCccceeecCceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHH
Q 002909 682 LTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIY 761 (867)
Q Consensus 682 ltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~ 761 (867)
++++|||+||+|||+++.++..|++.++.+|+++++.|+++++++|.+++ .|++.+.++++++++.+.+.|||+.+
T Consensus 290 ~~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (374)
T cd03801 290 LVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLL----DDPELRRRLGEAARERVAERFSWDRV 365 (374)
T ss_pred chHHHHHHcCCcEEEeCCCChhHHhcCCcceEEeCCCCHHHHHHHHHHHH----cChHHHHHHHHHHHHHHHHhcCHHHH
Confidence 99999999999999999999999999899999999999999999999888 89999999999999999999999999
Q ss_pred HHHHHHHH
Q 002909 762 ANKVLNMG 769 (867)
Q Consensus 762 a~~ll~ly 769 (867)
++++.++|
T Consensus 366 ~~~~~~~~ 373 (374)
T cd03801 366 AARTEEVY 373 (374)
T ss_pred HHHHHHhh
Confidence 99999865
No 42
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=100.00 E-value=5.7e-33 Score=305.95 Aligned_cols=369 Identities=19% Similarity=0.243 Sum_probs=260.8
Q ss_pred eEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCCCCCCCCCCCCccccccCC
Q 002909 282 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLIPNSKGTKCSQELEPIYDT 361 (867)
Q Consensus 282 rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~~~~~g~~~~~~~e~i~~~ 361 (867)
||++++...+| +.||...++. .|+++|.++||+|+ ++|...++... ... .
T Consensus 1 kil~~~~~~~p---------~~~G~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~------~~~---~ 50 (374)
T cd03817 1 KIGIFTDTYLP---------QVNGVATSIR--------RLAEELEKRGHEVY----VVAPSYPGAPE------EEE---V 50 (374)
T ss_pred CeeEeehhccC---------CCCCeehHHH--------HHHHHHHHcCCeEE----EEeCCCCCCCc------ccc---c
Confidence 68999877554 6899989888 66778888999999 88875432111 000 0
Q ss_pred CCeEEEEccCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEECCCCh-HHHHHHHHHhcCCcEEEEEc
Q 002909 362 KHSHILRIPFKTEQAILPQWVSRFDIYPYLGRFAQDATAKILDLMEGKPDLIIGNYSDG-NLVASLMASKLGITQATIAH 440 (867)
Q Consensus 362 ~~v~I~rvp~~~~~~~l~~~isr~~i~p~l~~f~~~~~~~i~~~l~~kPDIIh~h~~~~-~l~a~lla~~~gip~V~t~H 440 (867)
.+....+.+.... .+....+. +...+...+. ..+||+||+|.+.. +..+..++++.++|++++.|
T Consensus 51 ~~~~~~~~~~~~~-------~~~~~~~~----~~~~~~~~~~---~~~~Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 116 (374)
T cd03817 51 VVVRPFRVPTFKY-------PDFRLPLP----IPRALIIILK---ELGPDIVHTHTPFSLGLLGLRVARKLGIPVVATYH 116 (374)
T ss_pred ccccccccccchh-------hhhhcccc----HHHHHHHHHh---hcCCCEEEECCchhhhhHHHHHHHHcCCCEEEEec
Confidence 0111111111100 00000111 1111222122 35899999997543 45667778889999999999
Q ss_pred CCcccccccchhhhhhcCccccchhhh-hHHHHHHhcCCEEEecCHHHHhhcCCCCCccccccccccccceeeeccCCCC
Q 002909 441 ALEKSKYEDSDAKWKELDPKYHFSCQF-TADLIAMNQTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVF 519 (867)
Q Consensus 441 ~l~~~~~~~s~~~~~~~~~~y~f~~~~-~~e~ial~~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~ 519 (867)
+....-. .... . .......... ..+...++.+|.+++.|....+.+++. |.
T Consensus 117 ~~~~~~~-~~~~-~---~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~~~~~~--------------------~~--- 168 (374)
T cd03817 117 TMYEDYT-HYVP-L---GRLLARAVVRRKLSRRFYNRCDAVIAPSEKIADLLREY--------------------GV--- 168 (374)
T ss_pred CCHHHHH-HHHh-c---ccchhHHHHHHHHHHHHhhhCCEEEeccHHHHHHHHhc--------------------CC---
Confidence 8654110 0000 0 0000000011 234557889999999998765522211 21
Q ss_pred CCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccccccccccCCCCcEEEEEeccCCcCChHHHHHHHHHh
Q 002909 520 DPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHIGYLADRKKPIIFSMARLDTVKNITGLTEWYGKN 599 (867)
Q Consensus 520 ~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l 599 (867)
..++.++|||+|...+.+......+ ..++. .++++.|+++|++.+.||++.+++++..+
T Consensus 169 ~~~~~vi~~~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~G~~~~~k~~~~l~~~~~~~ 227 (374)
T cd03817 169 KRPIEVIPTGIDLDRFEPVDGDDER-------------------RKLGI--PEDEPVLLYVGRLAKEKNIDFLIRAFARL 227 (374)
T ss_pred CCceEEcCCccchhccCccchhHHH-------------------HhcCC--CCCCeEEEEEeeeecccCHHHHHHHHHHH
Confidence 3468999999999887665433221 22333 55678999999999999999999999999
Q ss_pred HccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCC
Q 002909 600 KRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEA 679 (867)
Q Consensus 600 ~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~Eg 679 (867)
.+..++++++++|+++. .+.++++++++++.++|.|+|+ ++.+++..+++. ||++++|+..|+
T Consensus 228 ~~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~g~----~~~~~~~~~~~~-ad~~l~~s~~e~ 290 (374)
T cd03817 228 LKEEPDVKLVIVGDGPE------------REELEELARELGLADRVIFTGF----VPREELPDYYKA-ADLFVFASTTET 290 (374)
T ss_pred HHhCCCeEEEEEeCCch------------HHHHHHHHHHcCCCCcEEEecc----CChHHHHHHHHH-cCEEEecccccC
Confidence 87778999999999865 4677888888999999999995 456789999987 999999999999
Q ss_pred CCHHHHHHHHcCCCEEecCCCCccceeecCceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHH
Q 002909 680 FGLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWK 759 (867)
Q Consensus 680 fGltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~ 759 (867)
+|++++|||+||+|||+++.|+..|++.++.+|+++++++. +++++|.+++ +|++.+++|++++++.+.+.+
T Consensus 291 ~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~--- 362 (374)
T cd03817 291 QGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGDE-ALAEALLRLL----QDPELRRRLSKNAEESAEKFS--- 362 (374)
T ss_pred cChHHHHHHHcCCcEEEeCCCChhhheecCceeEEeCCCCH-HHHHHHHHHH----hChHHHHHHHHHHHHHHHHHH---
Confidence 99999999999999999999999999999999999998887 8999998887 899999999999999985443
Q ss_pred HHHHHHHHHH
Q 002909 760 IYANKVLNMG 769 (867)
Q Consensus 760 ~~a~~ll~ly 769 (867)
.++++.++|
T Consensus 363 -~~~~~~~~~ 371 (374)
T cd03817 363 -FAKKVEKLY 371 (374)
T ss_pred -HHHHHHHHH
Confidence 555555543
No 43
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=3.9e-33 Score=307.51 Aligned_cols=362 Identities=20% Similarity=0.273 Sum_probs=258.5
Q ss_pred eEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCCCCCCCCCCCCccccccCC
Q 002909 282 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLIPNSKGTKCSQELEPIYDT 361 (867)
Q Consensus 282 rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~~~~~g~~~~~~~e~i~~~ 361 (867)
||++++....| ..||.+.++. .|+++|.++||+|+ ++|........ ...
T Consensus 1 kIl~i~~~~~p---------~~~G~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~~------~~~---- 49 (364)
T cd03814 1 RIAIVTDTFLP---------QVNGVVRTLQ--------RLVEHLRARGHEVL----VIAPGPFRESE------GPA---- 49 (364)
T ss_pred CeEEEecccCc---------cccceehHHH--------HHHHHHHHCCCEEE----EEeCCchhhcc------CCC----
Confidence 68999976654 4689999988 67778888999999 88874321100 000
Q ss_pred CCeEEEEccCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEECCCCh-HHHHHHHHHhcCCcEEEEEc
Q 002909 362 KHSHILRIPFKTEQAILPQWVSRFDIYPYLGRFAQDATAKILDLMEGKPDLIIGNYSDG-NLVASLMASKLGITQATIAH 440 (867)
Q Consensus 362 ~~v~I~rvp~~~~~~~l~~~isr~~i~p~l~~f~~~~~~~i~~~l~~kPDIIh~h~~~~-~l~a~lla~~~gip~V~t~H 440 (867)
....+...+...... ++ +.+. ....+.+.+. ..+||+||++.... ++.+..++++.++|++.+.|
T Consensus 50 ~~~~~~~~~~~~~~~-----~~-~~~~-----~~~~~~~~~~---~~~pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 115 (364)
T cd03814 50 RVVPVPSVPLPGYPE-----IR-LALP-----PRRRVRRLLD---AFAPDVVHIATPGPLGLAALRAARRLGIPVVTSYH 115 (364)
T ss_pred CceeecccccCcccc-----eE-eccc-----chhhHHHHHH---hcCCCEEEEeccchhhHHHHHHHHHcCCCEEEEEe
Confidence 112222222111110 00 0000 0111222222 24899999886543 45677778889999999999
Q ss_pred CCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHHHHhhcCCCCCccccccccccccceeeeccCCCCC
Q 002909 441 ALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFD 520 (867)
Q Consensus 441 ~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~ 520 (867)
+.......... ..... .+. ........+.+|.+++.|....+.... .. .
T Consensus 116 ~~~~~~~~~~~--~~~~~---~~~--~~~~~~~~~~~d~i~~~s~~~~~~~~~----------------------~~--~ 164 (364)
T cd03814 116 TDFPEYLRYYG--LGPLS---WLA--WAYLRWFHNRADRVLVPSPSLADELRA----------------------RG--F 164 (364)
T ss_pred cChHHHhhhcc--cchHh---Hhh--HHHHHHHHHhCCEEEeCCHHHHHHHhc----------------------cC--C
Confidence 86442211000 00000 000 112334678999999999877651111 01 4
Q ss_pred CcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccccccccccCCCCcEEEEEeccCCcCChHHHHHHHHHhH
Q 002909 521 PKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHIGYLADRKKPIIFSMARLDTVKNITGLTEWYGKNK 600 (867)
Q Consensus 521 ~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~ 600 (867)
.++.+++||+|.+.|.+........ ..++ ..++++|+++|++.+.||++.+++++..+.
T Consensus 165 ~~~~~~~~g~~~~~~~~~~~~~~~~------------------~~~~---~~~~~~i~~~G~~~~~k~~~~~i~~~~~l~ 223 (364)
T cd03814 165 RRVRLWPRGVDTELFHPRRRDEALR------------------ARLG---PPDRPVLLYVGRLAPEKNLEALLDADLPLR 223 (364)
T ss_pred CceeecCCCccccccCcccccHHHH------------------HHhC---CCCCeEEEEEeccccccCHHHHHHHHHHhh
Confidence 5789999999998887654322110 1222 345678999999999999999999999998
Q ss_pred ccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCC
Q 002909 601 RLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAF 680 (867)
Q Consensus 601 ~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~Egf 680 (867)
+. ++++|+|+|+++. .+.++ +..++|.|.|+ ++.+++..+++. ||++++||..|+|
T Consensus 224 ~~-~~~~l~i~G~~~~------------~~~~~------~~~~~v~~~g~----~~~~~~~~~~~~-~d~~l~~s~~e~~ 279 (364)
T cd03814 224 RR-PPVRLVIVGDGPA------------RARLE------ARYPNVHFLGF----LDGEELAAAYAS-ADVFVFPSRTETF 279 (364)
T ss_pred hc-CCceEEEEeCCch------------HHHHh------ccCCcEEEEec----cCHHHHHHHHHh-CCEEEECcccccC
Confidence 76 8899999999865 12222 45689999995 456789999997 9999999999999
Q ss_pred CHHHHHHHHcCCCEEecCCCCccceeecCceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHH
Q 002909 681 GLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKI 760 (867)
Q Consensus 681 GltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~ 760 (867)
|++++|||+||+|||+++.|+..|++.++.+|++++++|.++++++|.+++ .|++.+++|++++++.+ ++|||+.
T Consensus 280 ~~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~-~~~~~~~ 354 (364)
T cd03814 280 GLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALL----ADPELRRRMAARARAEA-ERRSWEA 354 (364)
T ss_pred CcHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHH-hhcCHHH
Confidence 999999999999999999999999999999999999999999999999888 89999999999999998 8899999
Q ss_pred HHHHHHHHH
Q 002909 761 YANKVLNMG 769 (867)
Q Consensus 761 ~a~~ll~ly 769 (867)
++++++++|
T Consensus 355 ~~~~~~~~~ 363 (364)
T cd03814 355 FLDNLLEAY 363 (364)
T ss_pred HHHHHHHhh
Confidence 999999865
No 44
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=100.00 E-value=1.6e-33 Score=312.57 Aligned_cols=346 Identities=14% Similarity=0.179 Sum_probs=248.4
Q ss_pred eEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCCCCCCCCCCCCccccccCC
Q 002909 282 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLIPNSKGTKCSQELEPIYDT 361 (867)
Q Consensus 282 rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~~~~~g~~~~~~~e~i~~~ 361 (867)
||+++++.. ..||.++++. +++++|.+.||+|+ +++....+. ....... .
T Consensus 1 kIl~~~~~~-----------~~GG~~~~~~--------~l~~~L~~~~~~v~----~i~~~~~~~---~~~~~~~----~ 50 (358)
T cd03812 1 KILHIVGTM-----------NRGGIETFIM--------NYYRNLDRSKIQFD----FLVTSKEEG---DYDDEIE----K 50 (358)
T ss_pred CEEEEeCCC-----------CCccHHHHHH--------HHHHhcCccceEEE----EEEeCCCCc---chHHHHH----H
Confidence 688887643 3799999999 45556767999999 888642110 0111111 1
Q ss_pred CCeEEEEccCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEECCCChHHHHHHHHHhcCCcE-EEEEc
Q 002909 362 KHSHILRIPFKTEQAILPQWVSRFDIYPYLGRFAQDATAKILDLMEGKPDLIIGNYSDGNLVASLMASKLGITQ-ATIAH 440 (867)
Q Consensus 362 ~~v~I~rvp~~~~~~~l~~~isr~~i~p~l~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~l~a~lla~~~gip~-V~t~H 440 (867)
.++.+++++.... ..+ .+...+.+.+. ..+||+||+|......++.++++..+.|. +.+.|
T Consensus 51 ~~~~~~~~~~~~~-----------~~~----~~~~~~~~~~~---~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 112 (358)
T cd03812 51 LGGKIYYIPARKK-----------NPL----KYFKKLYKLIK---KNKYDIVHVHGSSASGFILLAAKKAGVKVRIAHSH 112 (358)
T ss_pred cCCeEEEecCCCc-----------cHH----HHHHHHHHHHh---cCCCCEEEEeCcchhHHHHHHHhhCCCCeEEEEec
Confidence 2556666543321 111 12222233222 25899999998876666676777778776 55677
Q ss_pred CCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHHHHhhcCCCCCccccccccccccceeeeccCCCCC
Q 002909 441 ALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFD 520 (867)
Q Consensus 441 ~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~ 520 (867)
.............+ ....+...+..+|.++++|....+.+... +. .
T Consensus 113 ~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~i~~s~~~~~~~~~~---------------------~~--~ 158 (358)
T cd03812 113 NTSDSHDKKKKILK-----------YKVLRKLINRLATDYLACSEEAGKWLFGK---------------------VK--N 158 (358)
T ss_pred cccccccccchhhH-----------HHHHHHHHHhcCCEEEEcCHHHHHHHHhC---------------------CC--c
Confidence 65433211111000 01223446788999999998776532211 11 5
Q ss_pred CcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccccccccccCCCCcEEEEEeccCCcCChHHHHHHHHHhH
Q 002909 521 PKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHIGYLADRKKPIIFSMARLDTVKNITGLTEWYGKNK 600 (867)
Q Consensus 521 ~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~ 600 (867)
.++.+||||+|.+.|.+....... ....+. .+++++|+++||+.+.||++.+++++..+.
T Consensus 159 ~~~~vi~ngvd~~~~~~~~~~~~~------------------~~~~~~--~~~~~~i~~vGr~~~~Kg~~~li~a~~~l~ 218 (358)
T cd03812 159 KKFKVIPNGIDLEKFIFNEEIRKK------------------RRELGI--LEDKFVIGHVGRFSEQKNHEFLIEIFAELL 218 (358)
T ss_pred ccEEEEeccCcHHHcCCCchhhhH------------------HHHcCC--CCCCEEEEEEeccccccChHHHHHHHHHHH
Confidence 689999999999877665332111 022333 567899999999999999999999999999
Q ss_pred ccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCC
Q 002909 601 RLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAF 680 (867)
Q Consensus 601 ~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~Egf 680 (867)
+..++++++|+|+|+. .+.+++.++++++.++|.|+|+. +++..+++. ||++|+||.+|+|
T Consensus 219 ~~~~~~~l~ivG~g~~------------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-adi~v~ps~~E~~ 279 (358)
T cd03812 219 KKNPNAKLLLVGDGEL------------EEEIKKKVKELGLEDKVIFLGVR------NDVPELLQA-MDVFLFPSLYEGL 279 (358)
T ss_pred HhCCCeEEEEEeCCch------------HHHHHHHHHhcCCCCcEEEeccc------CCHHHHHHh-cCEEEecccccCC
Confidence 8889999999999865 46778888899999999999962 356777776 9999999999999
Q ss_pred CHHHHHHHHcCCCEEecCCCCccceeecCceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH
Q 002909 681 GLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIY 753 (867)
Q Consensus 681 GltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~ 753 (867)
|++++|||+||+|||+|+.||..|++.+ ..|++..++++++++++|.+++ +||+.+++++..+.....
T Consensus 280 ~~~~lEAma~G~PvI~s~~~~~~~~i~~-~~~~~~~~~~~~~~a~~i~~l~----~~~~~~~~~~~~~~~~~~ 347 (358)
T cd03812 280 PLVLIEAQASGLPCILSDTITKEVDLTD-LVKFLSLDESPEIWAEEILKLK----SEDRRERSSESIKKKGLD 347 (358)
T ss_pred CHHHHHHHHhCCCEEEEcCCchhhhhcc-CccEEeCCCCHHHHHHHHHHHH----hCcchhhhhhhhhhccch
Confidence 9999999999999999999999999988 5677777778999999999988 899999988888876653
No 45
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=100.00 E-value=8.3e-34 Score=318.63 Aligned_cols=267 Identities=18% Similarity=0.241 Sum_probs=201.9
Q ss_pred CCCeEEEECCCChHHHHHHHHHhcCCcE--EEEEcCCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCH
Q 002909 408 GKPDLIIGNYSDGNLVASLMASKLGITQ--ATIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTY 485 (867)
Q Consensus 408 ~kPDIIh~h~~~~~l~a~lla~~~gip~--V~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~ 485 (867)
.+||+||+|.....+++.++++..++|. +.+.|....... .+.. ..+..+|.++++|.
T Consensus 83 ~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~--------------~~~~------~~~~~~d~~i~~S~ 142 (359)
T PRK09922 83 TQPDIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDHKK--------------HAEC------KKITCADYHLAISS 142 (359)
T ss_pred cCCCEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCcccccc--------------hhhh------hhhhcCCEEEEcCH
Confidence 4899999998766666677777667654 455564211100 0000 12368999999998
Q ss_pred HHHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccccc
Q 002909 486 QEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEH 565 (867)
Q Consensus 486 ~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~ 565 (867)
...+.+. ..|++ .+++.+||||+|.+.+.....
T Consensus 143 ~~~~~~~--------------------~~~~~--~~ki~vi~N~id~~~~~~~~~------------------------- 175 (359)
T PRK09922 143 GIKEQMM--------------------ARGIS--AQRISVIYNPVEIKTIIIPPP------------------------- 175 (359)
T ss_pred HHHHHHH--------------------HcCCC--HHHEEEEcCCCCHHHccCCCc-------------------------
Confidence 7665221 12444 668999999999654321110
Q ss_pred cccccCCCCcEEEEEeccC--CcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCC
Q 002909 566 IGYLADRKKPIIFSMARLD--TVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQG 643 (867)
Q Consensus 566 lGll~~~~k~iIl~vGRL~--~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~ 643 (867)
...++++|+++||+. +.||++.+++++.++. ++++|+|+|+|++ .+.++++++++++.+
T Consensus 176 ----~~~~~~~i~~~Grl~~~~~k~~~~l~~a~~~~~---~~~~l~ivG~g~~------------~~~l~~~~~~~~l~~ 236 (359)
T PRK09922 176 ----ERDKPAVFLYVGRLKFEGQKNVKELFDGLSQTT---GEWQLHIIGDGSD------------FEKCKAYSRELGIEQ 236 (359)
T ss_pred ----ccCCCcEEEEEEEEecccCcCHHHHHHHHHhhC---CCeEEEEEeCCcc------------HHHHHHHHHHcCCCC
Confidence 023567899999996 4699999999998874 3799999999976 567889999999999
Q ss_pred cEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecC-CCCccceeecCceEEEeCCCCHHH
Q 002909 644 QFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATN-QGGPAEIIIDGVSGFHIDPNNGDE 722 (867)
Q Consensus 644 ~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~-~gG~~EiI~dg~~G~lv~p~d~e~ 722 (867)
+|.|+|++.+ ..+++..+|+. +|++|+||.+|+||++++||||||+|||+|+ .||+.|+|.++.+|++++++|+++
T Consensus 237 ~v~f~G~~~~--~~~~~~~~~~~-~d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~~ 313 (359)
T PRK09922 237 RIIWHGWQSQ--PWEVVQQKIKN-VSALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGLNGELYTPGNIDE 313 (359)
T ss_pred eEEEecccCC--cHHHHHHHHhc-CcEEEECCcccCcChHHHHHHHcCCCEEEeCCCCChHHHccCCCceEEECCCCHHH
Confidence 9999998654 24677777776 9999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Q 002909 723 SSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKVLNMGS 770 (867)
Q Consensus 723 lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll~ly~ 770 (867)
++++|.+++ +|++.+ +..+......+|+-+.+.+++..+|.
T Consensus 314 la~~i~~l~----~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (359)
T PRK09922 314 FVGKLNKVI----SGEVKY---QHDAIPNSIERFYEVLYFKNLNNALF 354 (359)
T ss_pred HHHHHHHHH----hCcccC---CHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 999999988 777643 12233333467777888888887643
No 46
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=100.00 E-value=1.7e-32 Score=303.01 Aligned_cols=357 Identities=17% Similarity=0.167 Sum_probs=249.2
Q ss_pred eEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCCCCCCCCCCCCccccccCC
Q 002909 282 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLIPNSKGTKCSQELEPIYDT 361 (867)
Q Consensus 282 rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~~~~~g~~~~~~~e~i~~~ 361 (867)
||+||++.. | ..||.+.++. +|+++|.+.||+|+ +++...... ........
T Consensus 1 kI~~v~~~~-~---------~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~-------~~~~~~~~ 51 (366)
T cd03822 1 RIALVSPYP-P---------RKCGIATFTT--------DLVNALSARGPDVL----VVSVAALYP-------SLLYGGEQ 51 (366)
T ss_pred CeEEecCCC-C---------CCCcHHHHHH--------HHHHHhhhcCCeEE----EEEeecccC-------cccCCCcc
Confidence 689998642 2 4799999999 56668888999999 776532210 00000000
Q ss_pred CCeEEEEccCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEECCCCh---HHH---HHHHHHhcCCcE
Q 002909 362 KHSHILRIPFKTEQAILPQWVSRFDIYPYLGRFAQDATAKILDLMEGKPDLIIGNYSDG---NLV---ASLMASKLGITQ 435 (867)
Q Consensus 362 ~~v~I~rvp~~~~~~~l~~~isr~~i~p~l~~f~~~~~~~i~~~l~~kPDIIh~h~~~~---~l~---a~lla~~~gip~ 435 (867)
....... . ..... ...+.+.+.. .+||+||++.+.+ ... .....+..++|+
T Consensus 52 ~~~~~~~-~--------------~~~~~-----~~~~~~~~~~---~~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (366)
T cd03822 52 EVVRVIV-L--------------DNPLD-----YRRAARAIRL---SGPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPV 108 (366)
T ss_pred cceeeee-c--------------CCchh-----HHHHHHHHhh---cCCCEEEEeeccccccchhhHHHHHHHhhcCCCE
Confidence 0010100 0 00000 1112222332 4899999876322 122 222234589999
Q ss_pred EEEEcCCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHHHHhhcCCCCCccccccccccccceeeecc
Q 002909 436 ATIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSG 515 (867)
Q Consensus 436 V~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~G 515 (867)
|++.|+..... . .+ .........++.+|.|+++|...... .+.
T Consensus 109 i~~~h~~~~~~----~-~~----------~~~~~~~~~~~~~d~ii~~s~~~~~~---~~~------------------- 151 (366)
T cd03822 109 VVTLHTVLLHE----P-RP----------GDRALLRLLLRRADAVIVMSSELLRA---LLL------------------- 151 (366)
T ss_pred EEEEecCCccc----c-ch----------hhhHHHHHHHhcCCEEEEeeHHHHHH---HHh-------------------
Confidence 99999861110 0 00 01112334678999999997333221 100
Q ss_pred CCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccccccccccCCCCcEEEEEeccCCcCChHHHHHH
Q 002909 516 INVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHIGYLADRKKPIIFSMARLDTVKNITGLTEW 595 (867)
Q Consensus 516 I~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA 595 (867)
..+..++.+||||+|...+.+..... ..+. ..++++|+++||+.+.||++.+++|
T Consensus 152 -~~~~~~~~~i~~~~~~~~~~~~~~~~----------------------~~~~--~~~~~~i~~~G~~~~~K~~~~ll~a 206 (366)
T cd03822 152 -RAYPEKIAVIPHGVPDPPAEPPESLK----------------------ALGG--LDGRPVLLTFGLLRPYKGLELLLEA 206 (366)
T ss_pred -hcCCCcEEEeCCCCcCcccCCchhhH----------------------hhcC--CCCCeEEEEEeeccCCCCHHHHHHH
Confidence 00136899999999987665532211 0111 4567899999999999999999999
Q ss_pred HHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccccCCCChHHHHHHHHccCcEEEEcC
Q 002909 596 YGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPA 675 (867)
Q Consensus 596 ~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS 675 (867)
+..+.+..++++|+|+|++.... ........++++++++.++|.|+|. .++.+++..+++. +|++++||
T Consensus 207 ~~~~~~~~~~~~l~i~G~~~~~~-------~~~~~~~~~~i~~~~~~~~v~~~~~---~~~~~~~~~~~~~-ad~~v~ps 275 (366)
T cd03822 207 LPLLVAKHPDVRLLVAGETHPDL-------ERYRGEAYALAERLGLADRVIFINR---YLPDEELPELFSA-ADVVVLPY 275 (366)
T ss_pred HHHHHhhCCCeEEEEeccCccch-------hhhhhhhHhHHHhcCCCCcEEEecC---cCCHHHHHHHHhh-cCEEEecc
Confidence 99998888899999999986510 0000111145788899999999984 1556799999997 99999999
Q ss_pred CCC--CCCHHHHHHHHcCCCEEecCCCCccceeecCceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH
Q 002909 676 LYE--AFGLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIY 753 (867)
Q Consensus 676 ~~E--gfGltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~ 753 (867)
.+| +||++++|||+||+|||+++.|| .+.+.++.+|++++++|+++++++|..++ +|++.+.+|++++++.+.
T Consensus 276 ~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~l~----~~~~~~~~~~~~~~~~~~ 350 (366)
T cd03822 276 RSADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRRLL----ADPELAQALRARAREYAR 350 (366)
T ss_pred cccccccchHHHHHHHcCCCEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHHHH----cChHHHHHHHHHHHHHHh
Confidence 999 99999999999999999999999 77778888999999999999999999888 899999999999999996
Q ss_pred HhCCHHHHHHHHHHHH
Q 002909 754 ECYTWKIYANKVLNMG 769 (867)
Q Consensus 754 ~~ysw~~~a~~ll~ly 769 (867)
+ |||+.+++++.++|
T Consensus 351 ~-~s~~~~~~~~~~~~ 365 (366)
T cd03822 351 A-MSWERVAERYLRLL 365 (366)
T ss_pred h-CCHHHHHHHHHHHh
Confidence 6 99999999999975
No 47
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=100.00 E-value=3.2e-33 Score=320.51 Aligned_cols=382 Identities=16% Similarity=0.188 Sum_probs=248.6
Q ss_pred EEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCCCCCCCCCC---CCcccccc
Q 002909 283 VVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLIPNSKGTKC---SQELEPIY 359 (867)
Q Consensus 283 I~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~~~~~g~~~---~~~~e~i~ 359 (867)
|+++.|+.. ..||.++.++|.|++|.+ +..||+|+ |+|....+...... ....+ +.
T Consensus 3 ~~f~hp~~~----------~ggg~ervl~~a~~~l~~------~~~~~~v~----i~t~~~~~~~~~~l~~~~~~f~-~~ 61 (419)
T cd03806 3 VGFFHPYCN----------AGGGGERVLWCAVRALQK------RYPNNIVV----IYTGDLDATPEEILEKVESRFN-IE 61 (419)
T ss_pred EEEECCCCC----------CCCCchHHHHHHHHHHHH------hCCCcEEE----EECCCCCCCHHHHHHHHHHhcC-ee
Confidence 677776653 256999999987776544 12378888 99987443110000 00110 11
Q ss_pred CCCCeEEEEcc-CCCcccccccccccccchhh---HHHHHHHHHHHHHHHcCCCCeEEEECCCChHHHHHHHHHhcCCcE
Q 002909 360 DTKHSHILRIP-FKTEQAILPQWVSRFDIYPY---LGRFAQDATAKILDLMEGKPDLIIGNYSDGNLVASLMASKLGITQ 435 (867)
Q Consensus 360 ~~~~v~I~rvp-~~~~~~~l~~~isr~~i~p~---l~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~l~a~lla~~~gip~ 435 (867)
..+++.++++. .+. |+.+ ..|+. +.++...+...+....+.+||||+.+...+..+ .++....++|+
T Consensus 62 ~~~~~~~~~~~~~~~-------~~~~-~~~~r~~~~~~~~~~~~~~~~~~~~~~pDv~i~~~g~~~~~-~~~~~~~~~~~ 132 (419)
T cd03806 62 LDRPRIVFFLLKYRK-------LVEA-STYPRFTLLGQALGSMILGLEALLKLVPDIFIDTMGYPFTY-PLVRLLGGCPV 132 (419)
T ss_pred cCCCceEEEEeccee-------eecc-ccCCceeeHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccHH-HHHHHhcCCeE
Confidence 11244444442 111 1211 12222 123333333333333245899999886433111 11222348899
Q ss_pred EEEEcCCcc--ccc--ccchh---------hhh----hcCccccchhhhhHHHHHHhcCCEEEecCHHHHhhcCCCCCcc
Q 002909 436 ATIAHALEK--SKY--EDSDA---------KWK----ELDPKYHFSCQFTADLIAMNQTDFIITSTYQEIAGSKDRPGQY 498 (867)
Q Consensus 436 V~t~H~l~~--~~~--~~s~~---------~~~----~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~~~~~~k~~~gqY 498 (867)
++.+|-... ... ...+. ... .....|. ......+..+++.+|.|+++|....+.+++..+
T Consensus 133 i~y~h~P~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~-~~~~~~~~~~~~~aD~ii~~S~~~~~~~~~~~~-- 209 (419)
T cd03806 133 GAYVHYPTISTDMLQKVRSREASYNNSATIARSPVLSKAKLLYY-RLFAFLYGLAGSFADVVMVNSTWTRNHIRSLWK-- 209 (419)
T ss_pred EEEecCCcchHHHHHHHhhccccccCccchhccchHHHHHHHHH-HHHHHHHHHHhhcCCEEEECCHHHHHHHHHHhC--
Confidence 999992110 110 00000 000 0000000 001124566889999999999877664332211
Q ss_pred ccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccccccccccCCCCcEEE
Q 002909 499 ESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHIGYLADRKKPIIF 578 (867)
Q Consensus 499 ~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~lGll~~~~k~iIl 578 (867)
. ..++.||+||+|.+.|.+.... . ..++++|+
T Consensus 210 ------------------~--~~~~~vi~~gvd~~~~~~~~~~--------------------------~--~~~~~~il 241 (419)
T cd03806 210 ------------------R--NTKPSIVYPPCDVEELLKLPLD--------------------------E--KTRENQIL 241 (419)
T ss_pred ------------------c--CCCcEEEcCCCCHHHhcccccc--------------------------c--ccCCcEEE
Confidence 0 2478999999998766543210 0 34567999
Q ss_pred EEeccCCcCChHHHHHHHHHhHccCC-----CeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccccC
Q 002909 579 SMARLDTVKNITGLTEWYGKNKRLRN-----MVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTD 653 (867)
Q Consensus 579 ~vGRL~~~Kgid~LieA~~~l~~~~~-----~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d 653 (867)
|+||+.+.||++.+++|+.++.+..+ +++|+|+|++.. .+...+.+.++++++++++.++|.|+|
T Consensus 242 ~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~------~~~~~~~~~L~~~~~~l~l~~~V~f~g---- 311 (419)
T cd03806 242 SIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRN------EDDEKRVEDLKLLAKELGLEDKVEFVV---- 311 (419)
T ss_pred EEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCC------cccHHHHHHHHHHHHHhCCCCeEEEec----
Confidence 99999999999999999999987654 599999999754 122346778999999999999999999
Q ss_pred CCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCCcc-ceee---cCceEEEeCCCCHHHHHHHHHH
Q 002909 654 RYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPA-EIII---DGVSGFHIDPNNGDESSNKIAD 729 (867)
Q Consensus 654 ~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG~~-EiI~---dg~~G~lv~p~d~e~lA~aI~~ 729 (867)
.++.+++..+|+. ||++|+|+..|+||++++|||+||+|||+++.||+. |++. ++.+|++++ |++++|++|.+
T Consensus 312 ~v~~~~l~~~l~~-adv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~--d~~~la~ai~~ 388 (419)
T cd03806 312 NAPFEELLEELST-ASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLAS--TAEEYAEAIEK 388 (419)
T ss_pred CCCHHHHHHHHHh-CeEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEeC--CHHHHHHHHHH
Confidence 4667899999987 999999999999999999999999999999998864 7887 899999985 99999999999
Q ss_pred HHHHhhcC-HHHHHHHHHHHHHHHHHhCCHHHHHH
Q 002909 730 FFEKCKTD-AGYWNQMSAAGRQRIYECYTWKIYAN 763 (867)
Q Consensus 730 ll~~~~~d-p~~~~~m~~~ar~~v~~~ysw~~~a~ 763 (867)
++ ++ ++.++.+ .++++.+.++|||+.+.+
T Consensus 389 ll----~~~~~~~~~~-~~~~~~~~~~fs~~~f~~ 418 (419)
T cd03806 389 IL----SLSEEERLRI-RRAARSSVKRFSDEEFER 418 (419)
T ss_pred HH----hCCHHHHHHH-HHHHHHHHHhhCHHHhcc
Confidence 98 54 4455555 555556779999998753
No 48
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=100.00 E-value=4.7e-33 Score=309.02 Aligned_cols=343 Identities=19% Similarity=0.235 Sum_probs=247.1
Q ss_pred ceEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCCCCCCCCCCCCccccccC
Q 002909 281 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLIPNSKGTKCSQELEPIYD 360 (867)
Q Consensus 281 ~rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~~~~~g~~~~~~~e~i~~ 360 (867)
|||++++... ..||.++++. .++++|.++||+|+ +++... .
T Consensus 1 MkIl~~~~~~-----------~~gG~~~~~~--------~l~~~l~~~G~~v~----v~~~~~---------~------- 41 (365)
T cd03825 1 MKVLHLNTSD-----------ISGGAARAAY--------RLHRALQAAGVDST----MLVQEK---------K------- 41 (365)
T ss_pred CeEEEEecCC-----------CCCcHHHHHH--------HHHHHHHhcCCcee----EEEeec---------c-------
Confidence 7999998542 2599999998 56667788999999 887621 0
Q ss_pred CCCeEEEEccCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEECCCChHHHHHHHHHhc--CCcEEEE
Q 002909 361 TKHSHILRIPFKTEQAILPQWVSRFDIYPYLGRFAQDATAKILDLMEGKPDLIIGNYSDGNLVASLMASKL--GITQATI 438 (867)
Q Consensus 361 ~~~v~I~rvp~~~~~~~l~~~isr~~i~p~l~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~l~a~lla~~~--gip~V~t 438 (867)
.. .+.+. ..+|||||+|.+....+......+. ++|.|++
T Consensus 42 ---------~~---------------------------~~~~~---~~~~diih~~~~~~~~~~~~~~~~~~~~~~~v~~ 82 (365)
T cd03825 42 ---------AL---------------------------ISKIE---IINADIVHLHWIHGGFLSIEDLSKLLDRKPVVWT 82 (365)
T ss_pred ---------hh---------------------------hhChh---cccCCEEEEEccccCccCHHHHHHHHcCCCEEEE
Confidence 00 00111 2489999999866544444444444 9999999
Q ss_pred EcCCcccccc----cchhhhh------hcCcccc---chhhhhH-HHHHH-hcCCEEEecCHHHHhhcCCCCCccccccc
Q 002909 439 AHALEKSKYE----DSDAKWK------ELDPKYH---FSCQFTA-DLIAM-NQTDFIITSTYQEIAGSKDRPGQYESHTA 503 (867)
Q Consensus 439 ~H~l~~~~~~----~s~~~~~------~~~~~y~---f~~~~~~-e~ial-~~aD~IIa~S~~~~~~~k~~~gqY~s~~~ 503 (867)
+|+.+..... .....|. .....+. +..+... ....+ ..++.++++|....+.+.+..
T Consensus 83 ~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~~~~~~~~~-------- 154 (365)
T cd03825 83 LHDMWPFTGGCHYPGGCDRYKTECGNCPQLGSYPEKDLSRWIWRRKRKAWADLNLTIVAPSRWLADCARSSS-------- 154 (365)
T ss_pred cccCcccccccCCccccccccccCCCCCCCCCCCcccHHHHHHHHHHHHhccCCcEEEehhHHHHHHHHhcc--------
Confidence 9986543210 0000000 0000000 1111111 11112 457788888876554222210
Q ss_pred cccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccccccccccCCCCcEEEEEecc
Q 002909 504 FTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHIGYLADRKKPIIFSMARL 583 (867)
Q Consensus 504 ~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~lGll~~~~k~iIl~vGRL 583 (867)
+++ ..++.+||||+|.+.|.|......+ ..+++ +++++++++.|+.
T Consensus 155 -----------~~~--~~~~~vi~ngi~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~~~~ 200 (365)
T cd03825 155 -----------LFK--GIPIEVIPNGIDTTIFRPRDKREAR-------------------KRLGL--PADKKIILFGAVG 200 (365)
T ss_pred -----------ccC--CCceEEeCCCCcccccCCCcHHHHH-------------------HHhCC--CCCCeEEEEEecC
Confidence 122 5789999999999888765443222 33454 5667778777777
Q ss_pred CC--cCChHHHHHHHHHhHcc-CCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccccCCCChHHH
Q 002909 584 DT--VKNITGLTEWYGKNKRL-RNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTDRYRNGEL 660 (867)
Q Consensus 584 ~~--~Kgid~LieA~~~l~~~-~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d~v~~~el 660 (867)
.. .||++.+++++..+.+. .++++++++|++... . ..++.++|.|+|+..+ .+++
T Consensus 201 ~~~~~K~~~~ll~a~~~l~~~~~~~~~~~i~G~~~~~------------~-------~~~~~~~v~~~g~~~~---~~~~ 258 (365)
T cd03825 201 GTDPRKGFDELIEALKRLAERWKDDIELVVFGASDPE------------I-------PPDLPFPVHYLGSLND---DESL 258 (365)
T ss_pred CCccccCHHHHHHHHHHhhhccCCCeEEEEeCCCchh------------h-------hccCCCceEecCCcCC---HHHH
Confidence 65 89999999999988764 578999999998651 0 0145678999997553 5678
Q ss_pred HHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCCccceeecCceEEEeCCCCHHHHHHHHHHHHHHhhcCHHH
Q 002909 661 YRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDPNNGDESSNKIADFFEKCKTDAGY 740 (867)
Q Consensus 661 ~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~ 740 (867)
..+++. ||++++||..|+||++++|||+||+|||+++.||..|++.++.+|+++++.|+++++++|.+++ .|++.
T Consensus 259 ~~~~~~-ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~----~~~~~ 333 (365)
T cd03825 259 ALIYSA-ADVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLL----ADPDE 333 (365)
T ss_pred HHHHHh-CCEEEeccccccccHHHHHHHhcCCCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHH----hCHHH
Confidence 888886 9999999999999999999999999999999999999999999999999999999999999888 89999
Q ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Q 002909 741 WNQMSAAGRQRIYECYTWKIYANKVLNMGS 770 (867)
Q Consensus 741 ~~~m~~~ar~~v~~~ysw~~~a~~ll~ly~ 770 (867)
+.+|++++++.+.++|||+.++++|+++|+
T Consensus 334 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~ 363 (365)
T cd03825 334 REELGEAARELAENEFDSRVQAKRYLSLYE 363 (365)
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 999999999999999999999999999764
No 49
>PLN02846 digalactosyldiacylglycerol synthase
Probab=100.00 E-value=6.2e-33 Score=316.85 Aligned_cols=369 Identities=13% Similarity=0.114 Sum_probs=240.3
Q ss_pred CcceEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCC-CceeeccEEEecCCCCCCCC-------C
Q 002909 279 NMFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQG-LSVKPQILVVTRLIPNSKGT-------K 350 (867)
Q Consensus 279 m~~rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~G-heV~~~V~VvT~~~~~~~g~-------~ 350 (867)
+.|||+|+|.-+.| +.+|..+-++ .++..|+++| |+|+ |+++..+..... .
T Consensus 3 ~~mrIaivTdt~lP---------~vnGva~s~~--------~~a~~L~~~G~heV~----vvaP~~~~~~~~~~~~~~~~ 61 (462)
T PLN02846 3 KKQHIAIFTTASLP---------WMTGTAVNPL--------FRAAYLAKDGDREVT----LVIPWLSLKDQKLVYPNKIT 61 (462)
T ss_pred CCCEEEEEEcCCCC---------CCCCeeccHH--------HHHHHHHhcCCcEEE----EEecCCcccccccccccccc
Confidence 45999999987765 7899988888 5666888899 7999 998865431110 0
Q ss_pred CCCc--cc-cccCCCCeEEEEccCCCccccccccccc--ccchhhHHHHHHHHHHHHHHHcCCCCeEEEECCCCh-HHH-
Q 002909 351 CSQE--LE-PIYDTKHSHILRIPFKTEQAILPQWVSR--FDIYPYLGRFAQDATAKILDLMEGKPDLIIGNYSDG-NLV- 423 (867)
Q Consensus 351 ~~~~--~e-~i~~~~~v~I~rvp~~~~~~~l~~~isr--~~i~p~l~~f~~~~~~~i~~~l~~kPDIIh~h~~~~-~l~- 423 (867)
++.. .+ .+....+-++.++|......+ +.+++. ..+++ ..++.+.+.+ .+|||||.|.+.. ++.
T Consensus 62 f~~~~~~e~~~~~~~~~~v~r~~s~~~p~y-p~r~~~~~r~~~~-----~~~i~~~l~~---~~pDVIHv~tP~~LG~~~ 132 (462)
T PLN02846 62 FSSPSEQEAYVRQWLEERISFLPKFSIKFY-PGKFSTDKRSILP-----VGDISETIPD---EEADIAVLEEPEHLTWYH 132 (462)
T ss_pred ccCchhhhhhhhhhccCeEEEecccccccC-cccccccccccCC-----hHHHHHHHHh---cCCCEEEEcCchhhhhHH
Confidence 0000 01 010011224445443221100 000000 01111 1234444443 4899999998654 454
Q ss_pred -HHHHHHhcCCcEEEEEcCCccccccc---chhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHHHHhhcCCCCCccc
Q 002909 424 -ASLMASKLGITQATIAHALEKSKYED---SDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQEIAGSKDRPGQYE 499 (867)
Q Consensus 424 -a~lla~~~gip~V~t~H~l~~~~~~~---s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~~~~~~k~~~gqY~ 499 (867)
+..++++.++ +|.++|+.. ..|.. .+..... ..++...+ ..-.++|.+++.|....+ +
T Consensus 133 ~g~~~~~k~~~-vV~tyHT~y-~~Y~~~~~~g~~~~~---l~~~~~~~----~~r~~~d~vi~pS~~~~~-l-------- 194 (462)
T PLN02846 133 HGKRWKTKFRL-VIGIVHTNY-LEYVKREKNGRVKAF---LLKYINSW----VVDIYCHKVIRLSAATQD-Y-------- 194 (462)
T ss_pred HHHHHHhcCCc-EEEEECCCh-HHHHHHhccchHHHH---HHHHHHHH----HHHHhcCEEEccCHHHHH-H--------
Confidence 6667777766 888999833 22210 0000000 00111111 112358999999974432 1
Q ss_pred cccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccccccccccCCC--CcEE
Q 002909 500 SHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHIGYLADRK--KPII 577 (867)
Q Consensus 500 s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~lGll~~~~--k~iI 577 (867)
.....+.++|||.+.|.|....... ..+ .++ .+.+
T Consensus 195 --------------------~~~~i~~v~GVd~~~f~~~~~~~~~--------------------~~~---~~~~~~~~~ 231 (462)
T PLN02846 195 --------------------PRSIICNVHGVNPKFLEIGKLKLEQ--------------------QKN---GEQAFTKGA 231 (462)
T ss_pred --------------------hhCEEecCceechhhcCCCcccHhh--------------------hcC---CCCCcceEE
Confidence 1123334589999988776432110 011 122 3578
Q ss_pred EEEeccCCcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccccCCCCh
Q 002909 578 FSMARLDTVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTDRYRN 657 (867)
Q Consensus 578 l~vGRL~~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d~v~~ 657 (867)
+|+|||.++||++.|++|+..+.+..++++|+|+|+|++ .++++++++++++..++ |.|.. +.
T Consensus 232 l~vGRL~~eK~~~~Li~a~~~l~~~~~~~~l~ivGdGp~------------~~~L~~~a~~l~l~~~v-f~G~~----~~ 294 (462)
T PLN02846 232 YYIGKMVWSKGYKELLKLLHKHQKELSGLEVDLYGSGED------------SDEVKAAAEKLELDVRV-YPGRD----HA 294 (462)
T ss_pred EEEecCcccCCHHHHHHHHHHHHhhCCCeEEEEECCCcc------------HHHHHHHHHhcCCcEEE-ECCCC----CH
Confidence 999999999999999999999987778999999999987 67889999999886555 77842 23
Q ss_pred HHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCCccceeecCceEEEeCCCCHHHHHHHHHHHHHHhhcC
Q 002909 658 GELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDPNNGDESSNKIADFFEKCKTD 737 (867)
Q Consensus 658 ~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~p~d~e~lA~aI~~ll~~~~~d 737 (867)
++ +++. +|+||+||.+|+||++++||||||+|||+++.++ .+++.++.+|+.++ |.++++++|..++. .+
T Consensus 295 ~~---~~~~-~DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v~~~~ng~~~~--~~~~~a~ai~~~l~---~~ 364 (462)
T PLN02846 295 DP---LFHD-YKVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS-NEFFKQFPNCRTYD--DGKGFVRATLKALA---EE 364 (462)
T ss_pred HH---HHHh-CCEEEECCCcccchHHHHHHHHcCCcEEEecCCC-cceeecCCceEecC--CHHHHHHHHHHHHc---cC
Confidence 33 4444 8999999999999999999999999999999998 59999999999995 89999999999883 23
Q ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhHH
Q 002909 738 AGYWNQMSAAGRQRIYECYTWKIYANKVLNMGSIY 772 (867)
Q Consensus 738 p~~~~~m~~~ar~~v~~~ysw~~~a~~ll~ly~~~ 772 (867)
+ ..++.+++ +.|||+..+++++++|++-
T Consensus 365 ~---~~~~~~a~----~~~SWe~~~~~l~~~~~~~ 392 (462)
T PLN02846 365 P---APLTDAQR----HELSWEAATERFLRVADLD 392 (462)
T ss_pred c---hhHHHHHH----HhCCHHHHHHHHHHHhccC
Confidence 3 22333332 5899999999999976543
No 50
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=100.00 E-value=2.3e-32 Score=297.09 Aligned_cols=345 Identities=17% Similarity=0.204 Sum_probs=250.3
Q ss_pred eEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCCCCCCCCCCCCccccccCC
Q 002909 282 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLIPNSKGTKCSQELEPIYDT 361 (867)
Q Consensus 282 rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~~~~~g~~~~~~~e~i~~~ 361 (867)
||++++++..+ .||.++++. +|+++|.++||+|+ +++....+ ..... ..
T Consensus 1 kI~i~~~~~~~----------~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~-------~~~~~--~~ 49 (348)
T cd03820 1 KILFVIPSLGN----------AGGAERVLS--------NLANALAEKGHEVT----IISLDKGE-------PPFYE--LD 49 (348)
T ss_pred CeEEEeccccC----------CCChHHHHH--------HHHHHHHhCCCeEE----EEecCCCC-------CCccc--cC
Confidence 68888876542 699999988 56667888999999 88874321 01111 12
Q ss_pred CCeEEEEccCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEECCCChHHHHHHHHHhcC-CcEEEEEc
Q 002909 362 KHSHILRIPFKTEQAILPQWVSRFDIYPYLGRFAQDATAKILDLMEGKPDLIIGNYSDGNLVASLMASKLG-ITQATIAH 440 (867)
Q Consensus 362 ~~v~I~rvp~~~~~~~l~~~isr~~i~p~l~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~l~a~lla~~~g-ip~V~t~H 440 (867)
+++.+..++...... +.. .+ .+...+.+.+. ..+||+||++.+.. ...+.....+ +|.+.+.|
T Consensus 50 ~~~~~~~~~~~~~~~----~~~---~~----~~~~~~~~~l~---~~~~d~i~~~~~~~--~~~~~~~~~~~~~~i~~~~ 113 (348)
T cd03820 50 PKIKVIDLGDKRDSK----LLA---RF----KKLRRLRKLLK---NNKPDVVISFLTSL--LTFLASLGLKIVKLIVSEH 113 (348)
T ss_pred Cccceeecccccccc----hhc---cc----cchHHHHHhhc---ccCCCEEEEcCchH--HHHHHHHhhccccEEEecC
Confidence 245555554332110 000 00 01112222222 25999999998762 2222233444 49999999
Q ss_pred CCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHHHHhhcCCCCCccccccccccccceeeeccCCCCC
Q 002909 441 ALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFD 520 (867)
Q Consensus 441 ~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~ 520 (867)
......... ..+ ...+...++.+|.+++.|....... .+.. .
T Consensus 114 ~~~~~~~~~--~~~------------~~~~~~~~~~~d~ii~~s~~~~~~~----------------------~~~~--~ 155 (348)
T cd03820 114 NSPDAYKKR--LRR------------LLLRRLLYRRADAVVVLTEEDRALY----------------------YKKF--N 155 (348)
T ss_pred CCccchhhh--hHH------------HHHHHHHHhcCCEEEEeCHHHHHHh----------------------hccC--C
Confidence 754322110 000 0024457899999999998764100 0111 5
Q ss_pred CcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccccccccccCCCCcEEEEEeccCCcCChHHHHHHHHHhH
Q 002909 521 PKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHIGYLADRKKPIIFSMARLDTVKNITGLTEWYGKNK 600 (867)
Q Consensus 521 ~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~ 600 (867)
.++.+||||+|...+.+. ...+++.++++|++.+.||++.+++++..+.
T Consensus 156 ~~~~vi~~~~~~~~~~~~-------------------------------~~~~~~~i~~~g~~~~~K~~~~l~~~~~~l~ 204 (348)
T cd03820 156 KNVVVIPNPLPFPPEEPS-------------------------------SDLKSKRILAVGRLVPQKGFDLLIEAWAKIA 204 (348)
T ss_pred CCeEEecCCcChhhcccc-------------------------------CCCCCcEEEEEEeeccccCHHHHHHHHHHHH
Confidence 689999999997655432 0346788999999999999999999999998
Q ss_pred ccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCC
Q 002909 601 RLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAF 680 (867)
Q Consensus 601 ~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~Egf 680 (867)
+..++++|+|+|++.. ...+.++++++++.++|.|.|. .+++..+++. ||++++||.+|+|
T Consensus 205 ~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-ad~~i~ps~~e~~ 265 (348)
T cd03820 205 KKHPDWKLRIVGDGPE------------REALEALIKELGLEDRVILLGF------TKNIEEYYAK-ASIFVLTSRFEGF 265 (348)
T ss_pred hcCCCeEEEEEeCCCC------------HHHHHHHHHHcCCCCeEEEcCC------cchHHHHHHh-CCEEEeCcccccc
Confidence 8889999999999866 4567778889999999999995 3478888887 9999999999999
Q ss_pred CHHHHHHHHcCCCEEecCCC-CccceeecCceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHH
Q 002909 681 GLTVIEAMNCGLPTFATNQG-GPAEIIIDGVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWK 759 (867)
Q Consensus 681 GltvlEAMa~GlPVIat~~g-G~~EiI~dg~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~ 759 (867)
|++++|||+||+|||+++.+ +..+++.++.+|++++++|+++++++|.+++ .|++.+++|++++++.+ ++|+|+
T Consensus 266 ~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll----~~~~~~~~~~~~~~~~~-~~~~~~ 340 (348)
T cd03820 266 PMVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLM----EDEELRKRMGANARESA-ERFSIE 340 (348)
T ss_pred CHHHHHHHHcCCCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHH-HHhCHH
Confidence 99999999999999999875 5677787777999999999999999999988 89999999999996655 899999
Q ss_pred HHHHHHH
Q 002909 760 IYANKVL 766 (867)
Q Consensus 760 ~~a~~ll 766 (867)
.+++++.
T Consensus 341 ~~~~~~~ 347 (348)
T cd03820 341 NIIKQWE 347 (348)
T ss_pred HHHHHhc
Confidence 9998875
No 51
>PLN02949 transferase, transferring glycosyl groups
Probab=100.00 E-value=1.9e-32 Score=316.46 Aligned_cols=399 Identities=17% Similarity=0.204 Sum_probs=258.2
Q ss_pred HHhcCCCcceEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCCCCCCCCCCC
Q 002909 273 LFSRLPNMFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLIPNSKGTKCS 352 (867)
Q Consensus 273 f~~r~pm~~rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~~~~~g~~~~ 352 (867)
..+|....++|+++.|+.. ..||.|+.+++.|++| .++|++++ |+|+|...+. .. .
T Consensus 26 ~~~~~~~~~~v~f~HP~~~----------~ggG~ERvl~~a~~~l--------~~~~~~~~--v~iyt~~~d~-~~---~ 81 (463)
T PLN02949 26 LRARRSRKRAVGFFHPYTN----------DGGGGERVLWCAVRAI--------QEENPDLD--CVIYTGDHDA-SP---D 81 (463)
T ss_pred HhcccCCCcEEEEECCCCC----------CCCChhhHHHHHHHHH--------HhhCCCCe--EEEEcCCCCC-CH---H
Confidence 3455566679999977653 3569999999777755 44788544 4588875211 11 1
Q ss_pred CccccccCCCCeEEEEccCCCcccc-c--ccccccccchhhHHHH---HHHHHHHHHHHcCCCCeEEEECCCChHHHHHH
Q 002909 353 QELEPIYDTKHSHILRIPFKTEQAI-L--PQWVSRFDIYPYLGRF---AQDATAKILDLMEGKPDLIIGNYSDGNLVASL 426 (867)
Q Consensus 353 ~~~e~i~~~~~v~I~rvp~~~~~~~-l--~~~isr~~i~p~l~~f---~~~~~~~i~~~l~~kPDIIh~h~~~~~l~a~l 426 (867)
+.+......-++++.+.+ ..+ + ++|+.+ ..|+++..+ ...+...+.......||+++-....+ ....
T Consensus 82 ~~l~~~~~~~~i~~~~~~----~~v~l~~~~~~~~-~~~~~~t~~~~~~~~~~l~~~~~~~~~p~v~vDt~~~~--~~~p 154 (463)
T PLN02949 82 SLAARARDRFGVELLSPP----KVVHLRKRKWIEE-ETYPRFTMIGQSLGSVYLAWEALCKFTPLYFFDTSGYA--FTYP 154 (463)
T ss_pred HHHHHHHhhcceecCCCc----eEEEecccccccc-ccCCceehHHHHHHHHHHHHHHHHhcCCCEEEeCCCcc--cHHH
Confidence 111111111122221100 111 1 235543 445443222 11221111111123666555333322 1112
Q ss_pred HHHhcCCcEEEEEcCCcccc------------ccc----chhhh-hhcCccccchhhhhHHHHHHhcCCEEEecCHHHHh
Q 002909 427 MASKLGITQATIAHALEKSK------------YED----SDAKW-KELDPKYHFSCQFTADLIAMNQTDFIITSTYQEIA 489 (867)
Q Consensus 427 la~~~gip~V~t~H~l~~~~------------~~~----s~~~~-~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~~~~ 489 (867)
+++..++|+++..|-..... +.. ....+ ......|..... ..+..+.+.+|.|+++|....+
T Consensus 155 l~~~~~~~v~~yvH~p~~~~dm~~~v~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~-~l~~~~~~~ad~ii~nS~~t~~ 233 (463)
T PLN02949 155 LARLFGCKVVCYTHYPTISSDMISRVRDRSSMYNNDASIARSFWLSTCKILYYRAFA-WMYGLVGRCAHLAMVNSSWTKS 233 (463)
T ss_pred HHHhcCCcEEEEEeCCcchHHHHHHHhhcccccCccchhhccchhHHHHHHHHHHHH-HHHHHHcCCCCEEEECCHHHHH
Confidence 23455899999999432111 000 00000 000011111111 1234567899999999987766
Q ss_pred hcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccccccccc
Q 002909 490 GSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHIGYL 569 (867)
Q Consensus 490 ~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~lGll 569 (867)
.+++.+ +. ..++.+|+||+|.+.+......
T Consensus 234 ~l~~~~-------------------~~---~~~i~vvyp~vd~~~~~~~~~~---------------------------- 263 (463)
T PLN02949 234 HIEALW-------------------RI---PERIKRVYPPCDTSGLQALPLE---------------------------- 263 (463)
T ss_pred HHHHHc-------------------CC---CCCeEEEcCCCCHHHcccCCcc----------------------------
Confidence 443221 11 3478899999997655221100
Q ss_pred cCCCCcEEEEEeccCCcCChHHHHHHHHHhHc----cCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcE
Q 002909 570 ADRKKPIIFSMARLDTVKNITGLTEWYGKNKR----LRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQF 645 (867)
Q Consensus 570 ~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~----~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V 645 (867)
...+++.++++||+.++||++.+++|++++.+ ..++++|+|+|++.. .+...+.++++++++++++.++|
T Consensus 264 ~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~------~~~~~~~~eL~~la~~l~L~~~V 337 (463)
T PLN02949 264 RSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRN------KEDEERLQKLKDRAKELGLDGDV 337 (463)
T ss_pred ccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCC------cccHHHHHHHHHHHHHcCCCCcE
Confidence 02355789999999999999999999998764 246899999999853 12234567889999999999999
Q ss_pred EEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCCcc-ceeec---CceEEEeCCCCHH
Q 002909 646 RWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPA-EIIID---GVSGFHIDPNNGD 721 (867)
Q Consensus 646 ~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG~~-EiI~d---g~~G~lv~p~d~e 721 (867)
+|+|+ ++.+++..+|+. ||++|+||..|+||++++|||+||+|||+++.||+. |++.+ |.+|++++ |++
T Consensus 338 ~f~g~----v~~~el~~ll~~-a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~~ 410 (463)
T PLN02949 338 EFHKN----VSYRDLVRLLGG-AVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLAT--TVE 410 (463)
T ss_pred EEeCC----CCHHHHHHHHHh-CcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcccccCC--CHH
Confidence 99995 556789999987 999999999999999999999999999999999985 77765 67899985 999
Q ss_pred HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Q 002909 722 ESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKVLNMGS 770 (867)
Q Consensus 722 ~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll~ly~ 770 (867)
+++++|.++++ ++++.+++|+++|++++ ++|||+.+++++.+.+.
T Consensus 411 ~la~ai~~ll~---~~~~~r~~m~~~ar~~~-~~FS~e~~~~~~~~~i~ 455 (463)
T PLN02949 411 EYADAILEVLR---MRETERLEIAAAARKRA-NRFSEQRFNEDFKDAIR 455 (463)
T ss_pred HHHHHHHHHHh---CCHHHHHHHHHHHHHHH-HHcCHHHHHHHHHHHHH
Confidence 99999999883 36888999999999999 77999999999998543
No 52
>PRK10125 putative glycosyl transferase; Provisional
Probab=100.00 E-value=1.3e-32 Score=313.82 Aligned_cols=277 Identities=16% Similarity=0.099 Sum_probs=192.1
Q ss_pred CCCCeEEEECCCChH---HHHH------HHHHhcCCcEEEEEcCCcccc----cccchhhhhhcCc---c---c-----c
Q 002909 407 EGKPDLIIGNYSDGN---LVAS------LMASKLGITQATIAHALEKSK----YEDSDAKWKELDP---K---Y-----H 462 (867)
Q Consensus 407 ~~kPDIIh~h~~~~~---l~a~------lla~~~gip~V~t~H~l~~~~----~~~s~~~~~~~~~---~---y-----~ 462 (867)
..+|||||.|...+. +... +..+..++|+|.|.|+.+... |...-..|+.-+. . | .
T Consensus 92 ~~~pDviHlH~~~~~~~~~~~l~~~~~~~~~~~~~~piV~TlHd~~~~tg~c~~~~~C~~~~~~c~~Cp~l~~~~~~~~d 171 (405)
T PRK10125 92 TPGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCPTLNNYPPVKVD 171 (405)
T ss_pred ccCCCEEEEecccCceecHHHHHHHHhhhhcccCCCCEEEecccccccCCCcCCCcccccccccCCCCCCccCCCCCccc
Confidence 369999999976652 3211 112456799999999987553 1111112221110 0 1 1
Q ss_pred chhhh-hHH----HHHHhcCCEEEecCHHHHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCC
Q 002909 463 FSCQF-TAD----LIAMNQTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFP 537 (867)
Q Consensus 463 f~~~~-~~e----~ial~~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p 537 (867)
.+.+. ... ....+.++.+|+.|...++...+.+ . ..++.|||||+|++.+.+
T Consensus 172 ~~~~~~~~k~~~~~~~~~~~~~iV~~S~~l~~~~~~~~---------------------~--~~~i~vI~NGid~~~~~~ 228 (405)
T PRK10125 172 RAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSLY---------------------G--PGRCRIINNGIDMATEAI 228 (405)
T ss_pred hHHHHHHHHHHHHHHHhhcCcEEEEcCHHHHHHHHHHc---------------------C--CCCEEEeCCCcCcccccc
Confidence 11111 011 1133557899999987665322111 1 458999999999754332
Q ss_pred CchHhhhhccCCcchHHhhhcccccccccccccCCCCcEEEEEecc--CCcCChHHHHHHHHHhHccCCCeEEEEEeCCC
Q 002909 538 YTEKQKRLTSFHPDIEELLYSKEDNSEHIGYLADRKKPIIFSMARL--DTVKNITGLTEWYGKNKRLRNMVNLVVVAGFF 615 (867)
Q Consensus 538 ~~~~~~r~~~~~~~i~~~l~~~~~~~~~lGll~~~~k~iIl~vGRL--~~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~ 615 (867)
..+.... .. .+++++|+++|+. .+.||++.+++|+..+. ++++|+|+|+++
T Consensus 229 ~~~~~~~----------------------~~--~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~---~~~~L~ivG~g~ 281 (405)
T PRK10125 229 LAELPPV----------------------RE--TQGKPKIAVVAHDLRYDGKTDQQLVREMMALG---DKIELHTFGKFS 281 (405)
T ss_pred ccccccc----------------------cc--CCCCCEEEEEEeccccCCccHHHHHHHHHhCC---CCeEEEEEcCCC
Confidence 2111000 00 3467789999994 46899999999998763 479999999875
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEE
Q 002909 616 DPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTF 695 (867)
Q Consensus 616 ~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVI 695 (867)
.. ..++|.++|+..+ ..++..+|+. +|+||+||.+|+||++++||||||+|||
T Consensus 282 ~~-----------------------~~~~v~~~g~~~~---~~~l~~~y~~-aDvfV~pS~~Egfp~vilEAmA~G~PVV 334 (405)
T PRK10125 282 PF-----------------------TAGNVVNHGFETD---KRKLMSALNQ-MDALVFSSRVDNYPLILCEALSIGVPVI 334 (405)
T ss_pred cc-----------------------cccceEEecCcCC---HHHHHHHHHh-CCEEEECCccccCcCHHHHHHHcCCCEE
Confidence 40 0246888997544 5678888887 9999999999999999999999999999
Q ss_pred ecCCCCccceeecCceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHH----HHHHHHHHHHHhCCHHHHHHHHHHHHh
Q 002909 696 ATNQGGPAEIIIDGVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQ----MSAAGRQRIYECYTWKIYANKVLNMGS 770 (867)
Q Consensus 696 at~~gG~~EiI~dg~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~----m~~~ar~~v~~~ysw~~~a~~ll~ly~ 770 (867)
+|++||..|++.++ +|++++|+|++++|+.+ ++...++ +.+++++++.++|||+.++++|+++|+
T Consensus 335 at~~gG~~Eiv~~~-~G~lv~~~d~~~La~~~---------~~~~~~~~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~ 403 (405)
T PRK10125 335 ATHSDAAREVLQKS-GGKTVSEEEVLQLAQLS---------KPEIAQAVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQ 403 (405)
T ss_pred EeCCCChHHhEeCC-cEEEECCCCHHHHHhcc---------CHHHHHHhhhhHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 99999999999775 99999999999999854 3333333 335688999899999999999999774
No 53
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=100.00 E-value=2.9e-32 Score=312.36 Aligned_cols=391 Identities=12% Similarity=0.063 Sum_probs=254.5
Q ss_pred CCcceEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCCCCCCCCCCCCcccc
Q 002909 278 PNMFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLIPNSKGTKCSQELEP 357 (867)
Q Consensus 278 pm~~rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~~~~~g~~~~~~~e~ 357 (867)
|...||++++.- + +|.+..+. ++++.|+++||+|+ |+|...+. ..+.
T Consensus 1 ~~~~~~~~~~~~------------~-~~~~~R~~--------~~a~~L~~~G~~V~----ii~~~~~~--------~~~~ 47 (415)
T cd03816 1 PKRKRVCVLVLG------------D-IGRSPRMQ--------YHALSLAKHGWKVD----LVGYLETP--------PHDE 47 (415)
T ss_pred CCccEEEEEEec------------c-cCCCHHHH--------HHHHHHHhcCceEE----EEEecCCC--------CCHH
Confidence 344678888741 2 33345556 57778889999999 88864211 1111
Q ss_pred ccCCCCeEEEEccCCC-cccccccccccccchhhHHHHHH---HHHHHHHHHcCCCCeEEEECCCCh---HHHHHHHHHh
Q 002909 358 IYDTKHSHILRIPFKT-EQAILPQWVSRFDIYPYLGRFAQ---DATAKILDLMEGKPDLIIGNYSDG---NLVASLMASK 430 (867)
Q Consensus 358 i~~~~~v~I~rvp~~~-~~~~l~~~isr~~i~p~l~~f~~---~~~~~i~~~l~~kPDIIh~h~~~~---~l~a~lla~~ 430 (867)
.....++.+..++... ..+. ......+...... .+...+.. ..+||+||+|.+.. ...+.++++.
T Consensus 48 ~~~~~~v~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~--~~~~Dvi~~~~~~~~~~~~~a~~~~~~ 119 (415)
T cd03816 48 ILSNPNITIHPLPPPPQRLNK------LPFLLFAPLKVLWQFFSLLWLLYK--LRPADYILIQNPPSIPTLLIAWLYCLL 119 (415)
T ss_pred HhcCCCEEEEECCCCcccccc------chHHHHHHHHHHHHHHHHHHHHHh--cCCCCEEEEeCCCCchHHHHHHHHHHH
Confidence 1123467888877653 1110 0111122221111 11222222 25799999986443 3456666778
Q ss_pred cCCcEEEEEcCCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHHHHhhcCCCCCccccccccccccce
Q 002909 431 LGITQATIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLC 510 (867)
Q Consensus 431 ~gip~V~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~ 510 (867)
.++|+|++.|+.+..... ... + .......+ ....+...++.+|.||++|+...+.+.+
T Consensus 120 ~~~~~V~~~h~~~~~~~~-~~~-~-~~~~~~~~--~~~~e~~~~~~ad~ii~vS~~~~~~l~~----------------- 177 (415)
T cd03816 120 RRTKLIIDWHNYGYTILA-LKL-G-ENHPLVRL--AKWYEKLFGRLADYNLCVTKAMKEDLQQ----------------- 177 (415)
T ss_pred hCCeEEEEcCCchHHHHh-ccc-C-CCCHHHHH--HHHHHHHHhhcCCEeeecCHHHHHHHHh-----------------
Confidence 899999999986432110 000 0 00000111 1123566789999999999887653321
Q ss_pred eeeccCCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhccc-ccccccccccCCCCcEEEEEeccCCcCCh
Q 002909 511 RVVSGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKE-DNSEHIGYLADRKKPIIFSMARLDTVKNI 589 (867)
Q Consensus 511 ~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~-~~~~~lGll~~~~k~iIl~vGRL~~~Kgi 589 (867)
.|++ ..++.|||||. ...|.|........... . ...-+... ......++. .++..+++++||+.+.||+
T Consensus 178 ---~~~~--~~ki~vI~Ng~-~~~f~p~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~-~~~~~vi~~~grl~~~K~~ 247 (415)
T cd03816 178 ---FNNW--KIRATVLYDRP-PEQFRPLPLEEKHELFL-K--LAKTFLTRELRIGAVQLS-EERPALLVSSTSWTPDEDF 247 (415)
T ss_pred ---hhcc--CCCeeecCCCC-HHHceeCcHHHHHHHHH-h--ccccccccccccccceec-CCCceEEEEeccccCCCCH
Confidence 1333 78999999995 46676654322110000 0 00000000 000011221 2345678889999999999
Q ss_pred HHHHHHHHHhHc------cCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccccCCCChHHHHHH
Q 002909 590 TGLTEWYGKNKR------LRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTDRYRNGELYRC 663 (867)
Q Consensus 590 d~LieA~~~l~~------~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d~v~~~el~~~ 663 (867)
+.|++|+..+.+ .+++++|+|+|+|+. .+.++++++++++.+.+.+.|+ ++.+++..+
T Consensus 248 ~~li~A~~~l~~~~~~~~~~~~i~l~ivG~G~~------------~~~l~~~~~~~~l~~~~~~~g~----~~~~~~~~~ 311 (415)
T cd03816 248 GILLDALVAYEKSAATGPKLPKLLCIITGKGPL------------KEKYLERIKELKLKKVTIRTPW----LSAEDYPKL 311 (415)
T ss_pred HHHHHHHHHHHHhhcccccCCCEEEEEEecCcc------------HHHHHHHHHHcCCCcEEEEcCc----CCHHHHHHH
Confidence 999999999864 246899999999976 5788999999999654445564 456789998
Q ss_pred HHccCcEEEEcC---CCCCCCHHHHHHHHcCCCEEecCCCCccceeecCceEEEeCCCCHHHHHHHHHHHHHHhhcC---
Q 002909 664 IADTKGAFVQPA---LYEAFGLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDPNNGDESSNKIADFFEKCKTD--- 737 (867)
Q Consensus 664 la~~aDvfV~PS---~~EgfGltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~p~d~e~lA~aI~~ll~~~~~d--- 737 (867)
|+. ||++|.|+ ..|+||++++||||||+|||+|+.||..|+|+++.+|++++ |++++|++|..++ +|
T Consensus 312 l~~-aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~~~~G~lv~--d~~~la~~i~~ll----~~~~~ 384 (415)
T cd03816 312 LAS-ADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLVFG--DSEELAEQLIDLL----SNFPN 384 (415)
T ss_pred HHh-CCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcCCCCEEEEC--CHHHHHHHHHHHH----hcCCC
Confidence 887 99999753 35889999999999999999999999999999999999995 9999999999988 67
Q ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 002909 738 AGYWNQMSAAGRQRIYECYTWKIYANKVL 766 (867)
Q Consensus 738 p~~~~~m~~~ar~~v~~~ysw~~~a~~ll 766 (867)
++.+++|+++|++.. .++|+....+.+
T Consensus 385 ~~~~~~m~~~~~~~~--~~~~~~~~~~~~ 411 (415)
T cd03816 385 RGKLNSLKKGAQEES--ELRWDENWDRVV 411 (415)
T ss_pred HHHHHHHHHHHHHhh--hcCHHHHHHHHh
Confidence 999999999999986 677876655543
No 54
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=100.00 E-value=1.4e-32 Score=303.60 Aligned_cols=364 Identities=19% Similarity=0.195 Sum_probs=255.3
Q ss_pred eEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCCCCCCCCCCCCccccccCC
Q 002909 282 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLIPNSKGTKCSQELEPIYDT 361 (867)
Q Consensus 282 rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~~~~~g~~~~~~~e~i~~~ 361 (867)
||++++.+..++ ..||.+.|+. +|+++|.+.||+|+ +++........ ......
T Consensus 1 ~ili~~~~~~~~--------~~gG~~~~~~--------~l~~~L~~~~~~v~----~~~~~~~~~~~-----~~~~~~-- 53 (365)
T cd03809 1 RILIDARFLASR--------RPTGIGRYAR--------ELLRALLKLDPEEV----LLLLPGAPGLL-----LLPLRA-- 53 (365)
T ss_pred CEEEechhhhcC--------CCCcHHHHHH--------HHHHHHHhcCCceE----EEEecCccccc-----cccchh--
Confidence 688888666541 4799999999 66668888999999 77764221000 000000
Q ss_pred CCeEEEEccCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEECCCChHHHHHHHHHhcCCcEEEEEcC
Q 002909 362 KHSHILRIPFKTEQAILPQWVSRFDIYPYLGRFAQDATAKILDLMEGKPDLIIGNYSDGNLVASLMASKLGITQATIAHA 441 (867)
Q Consensus 362 ~~v~I~rvp~~~~~~~l~~~isr~~i~p~l~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~l~a~lla~~~gip~V~t~H~ 441 (867)
.... .... .....+.....+.......+. ..+||+||++++..... +..++|+++++|+
T Consensus 54 -~~~~---~~~~---------~~~~~~~~~~~~~~~~~~~~~---~~~~Dii~~~~~~~~~~-----~~~~~~~i~~~hd 112 (365)
T cd03809 54 -ALRL---LLRL---------PRRLLWGLLFLLRAGDRLLLL---LLGLDLLHSPHNTAPLL-----RLRGVPVVVTIHD 112 (365)
T ss_pred -cccc---cccc---------ccccccchhhHHHHHHHHHhh---hcCCCeeeecccccCcc-----cCCCCCEEEEecc
Confidence 0000 0000 001111111111111122222 25899999998766443 6679999999998
Q ss_pred CcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHHHHhhcCCCCCccccccccccccceeeeccCCCCCC
Q 002909 442 LEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDP 521 (867)
Q Consensus 442 l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ 521 (867)
+...........+ ............++.+|.++++|+..++.+.+.. +++ ..
T Consensus 113 ~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~~-------------------~~~--~~ 164 (365)
T cd03809 113 LIPLRFPEYFSPG-------FRRYFRRLLRRALRRADAIITVSEATKRDLLRYL-------------------GVP--PD 164 (365)
T ss_pred chhhhCcccCCHH-------HHHHHHHHHHHHHHHcCEEEEccHHHHHHHHHHh-------------------CcC--HH
Confidence 7654432211110 0011112344578999999999987665332211 112 56
Q ss_pred cEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccccccccccCCCCcEEEEEeccCCcCChHHHHHHHHHhHc
Q 002909 522 KFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHIGYLADRKKPIIFSMARLDTVKNITGLTEWYGKNKR 601 (867)
Q Consensus 522 ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~ 601 (867)
++.++|||+|...+.+..... + ..... ..+++.|+++||+.+.||++.+++++..+.+
T Consensus 165 ~~~vi~~~~~~~~~~~~~~~~-~-------------------~~~~~--~~~~~~i~~~G~~~~~K~~~~~l~~~~~~~~ 222 (365)
T cd03809 165 KIVVIPLGVDPRFRPPPAEAE-V-------------------LRALY--LLPRPYFLYVGTIEPRKNLERLLEAFARLPA 222 (365)
T ss_pred HEEeeccccCccccCCCchHH-H-------------------HHHhc--CCCCCeEEEeCCCccccCHHHHHHHHHHHHH
Confidence 899999999988776654322 1 11111 4577899999999999999999999999998
Q ss_pred cCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCC
Q 002909 602 LRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFG 681 (867)
Q Consensus 602 ~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfG 681 (867)
..++++|+++|++... .......+++.++.++|.|+|+ ++.+++..+++. +|++++||.+|+||
T Consensus 223 ~~~~~~l~i~G~~~~~-----------~~~~~~~~~~~~~~~~v~~~g~----~~~~~~~~~~~~-~d~~l~ps~~e~~~ 286 (365)
T cd03809 223 KGPDPKLVIVGKRGWL-----------NEELLARLRELGLGDRVRFLGY----VSDEELAALYRG-ARAFVFPSLYEGFG 286 (365)
T ss_pred hcCCCCEEEecCCccc-----------cHHHHHHHHHcCCCCeEEECCC----CChhHHHHHHhh-hhhhcccchhccCC
Confidence 7778999999987651 1222233367788999999995 445789999987 99999999999999
Q ss_pred HHHHHHHHcCCCEEecCCCCccceeecCceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHH
Q 002909 682 LTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIY 761 (867)
Q Consensus 682 ltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~ 761 (867)
++++|||+||+|||+++.|+..|++ +.+|++++++|.++++++|.+++ .|++.+.++++++++.+ ++|||+.+
T Consensus 287 ~~~~Ea~a~G~pvI~~~~~~~~e~~--~~~~~~~~~~~~~~~~~~i~~l~----~~~~~~~~~~~~~~~~~-~~~sw~~~ 359 (365)
T cd03809 287 LPVLEAMACGTPVIASNISSLPEVA--GDAALYFDPLDPEALAAAIERLL----EDPALREELRERGLARA-KRFSWEKT 359 (365)
T ss_pred CCHHHHhcCCCcEEecCCCCcccee--cCceeeeCCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHH-HhCCHHHH
Confidence 9999999999999999999999998 45799999999999999998887 89999999999999655 88999999
Q ss_pred HHHHH
Q 002909 762 ANKVL 766 (867)
Q Consensus 762 a~~ll 766 (867)
+++++
T Consensus 360 ~~~~~ 364 (365)
T cd03809 360 ARRTL 364 (365)
T ss_pred HHHHh
Confidence 99876
No 55
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=100.00 E-value=9.3e-32 Score=295.49 Aligned_cols=353 Identities=18% Similarity=0.205 Sum_probs=244.6
Q ss_pred eEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCCCCCCCCCCCCccccccCC
Q 002909 282 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLIPNSKGTKCSQELEPIYDT 361 (867)
Q Consensus 282 rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~~~~~g~~~~~~~e~i~~~ 361 (867)
||++++++..| ..+||.+.++. .|+++|.++||+|+ +++......... .. .
T Consensus 1 kIl~i~~~~~~--------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~-----~~----~ 51 (359)
T cd03823 1 RILVVNHLYPP--------RSVGGAEVVAH--------DLAEALAKRGHEVA----VLTAGEDPPRQD-----KE----V 51 (359)
T ss_pred CeeEEcccCCc--------ccccchHHHHH--------HHHHHHHhcCCceE----EEeCCCCCCCcc-----cc----c
Confidence 68999876654 13699999998 55667777999999 888643221110 00 0
Q ss_pred CCeEEEEccC--CCcccccccccccccchhhHH-HHHHHHHHHHHHHcCCCCeEEEECCCCh-HHHHHHHHHhcCCcEEE
Q 002909 362 KHSHILRIPF--KTEQAILPQWVSRFDIYPYLG-RFAQDATAKILDLMEGKPDLIIGNYSDG-NLVASLMASKLGITQAT 437 (867)
Q Consensus 362 ~~v~I~rvp~--~~~~~~l~~~isr~~i~p~l~-~f~~~~~~~i~~~l~~kPDIIh~h~~~~-~l~a~lla~~~gip~V~ 437 (867)
.+..+...+. ....... ........+.. .+...+.+.+.. .+||+||+|.+.. .......++..++|+++
T Consensus 52 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~---~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~ 125 (359)
T cd03823 52 IGVVVYGRPIDEVLRSALP---RDLFHLSDYDNPAVVAEFARLLED---FRPDVVHFHHLQGLGVSILRAARDRGIPIVL 125 (359)
T ss_pred ccceeeccccccccCCCch---hhhhHHHhccCHHHHHHHHHHHHH---cCCCEEEECCccchHHHHHHHHHhcCCCEEE
Confidence 1111221110 0000000 00000000111 112222222222 4899999998643 33444556778999999
Q ss_pred EEcCCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHHHHhhcCCCCCccccccccccccceeeeccCC
Q 002909 438 IAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGIN 517 (867)
Q Consensus 438 t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~ 517 (867)
+.|+.+....... ......|.++++|+...+.+.+. |..
T Consensus 126 ~~hd~~~~~~~~~---------------------~~~~~~d~ii~~s~~~~~~~~~~--------------------~~~ 164 (359)
T cd03823 126 TLHDYWLICPRQG---------------------LFKKGGDAVIAPSRFLLDRYVAN--------------------GLF 164 (359)
T ss_pred EEeeeeeecchhh---------------------hhccCCCEEEEeCHHHHHHHHHc--------------------CCC
Confidence 9997543221000 01123399999998766533221 111
Q ss_pred CCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccccccccccCCCCcEEEEEeccCCcCChHHHHHHHH
Q 002909 518 VFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHIGYLADRKKPIIFSMARLDTVKNITGLTEWYG 597 (867)
Q Consensus 518 ~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~ 597 (867)
..++.+|+||+|...+.+... +. ..++++|+++||+.+.||++.+++++.
T Consensus 165 --~~~~~vi~n~~~~~~~~~~~~--------------------------~~--~~~~~~i~~~G~~~~~k~~~~li~~~~ 214 (359)
T cd03823 165 --AEKISVIRNGIDLDRAKRPRR--------------------------AP--PGGRLRFGFIGQLTPHKGVDLLLEAFK 214 (359)
T ss_pred --ccceEEecCCcChhhcccccc--------------------------CC--CCCceEEEEEecCccccCHHHHHHHHH
Confidence 468999999999877654321 01 456788999999999999999999999
Q ss_pred HhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccccCCCChHHHHHHHHccCcEEEEcCC-
Q 002909 598 KNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPAL- 676 (867)
Q Consensus 598 ~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~- 676 (867)
.+.+ ++++|+++|++.. ........ +..++|+++|+ ++.+++..+++. +|++++||.
T Consensus 215 ~l~~--~~~~l~i~G~~~~------------~~~~~~~~---~~~~~v~~~g~----~~~~~~~~~~~~-ad~~i~ps~~ 272 (359)
T cd03823 215 RLPR--GDIELVIVGNGLE------------LEEESYEL---EGDPRVEFLGA----YPQEEIDDFYAE-IDVLVVPSIW 272 (359)
T ss_pred HHHh--cCcEEEEEcCchh------------hhHHHHhh---cCCCeEEEeCC----CCHHHHHHHHHh-CCEEEEcCcc
Confidence 9876 7899999999865 11111111 56689999995 446899999997 999999997
Q ss_pred CCCCCHHHHHHHHcCCCEEecCCCCccceeecCceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhC
Q 002909 677 YEAFGLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECY 756 (867)
Q Consensus 677 ~EgfGltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~y 756 (867)
.|+||++++|||+||+|||+|+.||..|++.++.+|++++++|.++++++|.+++ +|++.++++++++++++..
T Consensus 273 ~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~~-- 346 (359)
T cd03823 273 PENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLI----DDPDLLERLRAGIEPPRSI-- 346 (359)
T ss_pred cCCCChHHHHHHHCCCCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHHHHH----hChHHHHHHHHhHHHhhhH--
Confidence 7999999999999999999999999999999999999999999999999999988 8999999999999887633
Q ss_pred CHHHHHHHHHHHHh
Q 002909 757 TWKIYANKVLNMGS 770 (867)
Q Consensus 757 sw~~~a~~ll~ly~ 770 (867)
+.++++++++|+
T Consensus 347 --~~~~~~~~~~~~ 358 (359)
T cd03823 347 --EDQAEEYLKLYR 358 (359)
T ss_pred --HHHHHHHHHHhh
Confidence 888999888764
No 56
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=100.00 E-value=1.7e-31 Score=291.51 Aligned_cols=356 Identities=21% Similarity=0.261 Sum_probs=257.1
Q ss_pred eEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCCCCCCCCCCCCccccccCC
Q 002909 282 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLIPNSKGTKCSQELEPIYDT 361 (867)
Q Consensus 282 rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~~~~~g~~~~~~~e~i~~~ 361 (867)
||++++.. .||.+.++. +|++.|.++||+|+ +++...... . ....
T Consensus 1 kIl~i~~~-------------~~g~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~------~----~~~~ 45 (359)
T cd03808 1 KILHIVTV-------------DGGLYSFRL--------PLIKALRAAGYEVH----VVAPPGDEL------E----ELEA 45 (359)
T ss_pred CeeEEEec-------------chhHHHHHH--------HHHHHHHhcCCeeE----EEecCCCcc------c----cccc
Confidence 57777743 377788888 56667888999999 888742210 0 1112
Q ss_pred CCeEEEEccCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEECCCChHHHHHHHHH-hcCCcEEEEEc
Q 002909 362 KHSHILRIPFKTEQAILPQWVSRFDIYPYLGRFAQDATAKILDLMEGKPDLIIGNYSDGNLVASLMAS-KLGITQATIAH 440 (867)
Q Consensus 362 ~~v~I~rvp~~~~~~~l~~~isr~~i~p~l~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~l~a~lla~-~~gip~V~t~H 440 (867)
.++.+..+|..... .+ .+..+. ....+.+.+.+ .+||+||+|.....+.+.+.++ ..+.+++++.|
T Consensus 46 ~~~~~~~~~~~~~~------~~---~~~~~~-~~~~~~~~~~~---~~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 112 (359)
T cd03808 46 LGVKVIPIPLDRRG------IN---PFKDLK-ALLRLYRLLRK---ERPDIVHTHTPKPGILGRLAARLAGVPKVIYTVH 112 (359)
T ss_pred CCceEEeccccccc------cC---hHhHHH-HHHHHHHHHHh---cCCCEEEEccccchhHHHHHHHHcCCCCEEEEec
Confidence 35667777654311 11 111111 11222333332 5899999998777777777666 45566777888
Q ss_pred CCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHHHHhhcCCCCCccccccccccccceeeeccCCCCC
Q 002909 441 ALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFD 520 (867)
Q Consensus 441 ~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~ 520 (867)
+......... ..+ ......++..++.+|.+++.|+...+...+.. +.+ ..
T Consensus 113 ~~~~~~~~~~-~~~---------~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~-------------------~~~-~~ 162 (359)
T cd03808 113 GLGFVFTSGG-LKR---------RLYLLLERLALRFTDKVIFQNEDDRDLALKLG-------------------IIK-KK 162 (359)
T ss_pred Ccchhhccch-hHH---------HHHHHHHHHHHhhccEEEEcCHHHHHHHHHhc-------------------CCC-cC
Confidence 7544321111 000 00111244577889999999987765322210 110 03
Q ss_pred CcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccccccccccCCCCcEEEEEeccCCcCChHHHHHHHHHhH
Q 002909 521 PKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHIGYLADRKKPIIFSMARLDTVKNITGLTEWYGKNK 600 (867)
Q Consensus 521 ~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~ 600 (867)
.++.++++|+|.+.+.+.... . .++++.|+++|++.+.||++.+++++..+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~--------------------------~--~~~~~~i~~~G~~~~~k~~~~li~~~~~l~ 214 (359)
T cd03808 163 KTVLIPGSGVDLDRFSPSPEP--------------------------I--PEDDPVFLFVARLLKDKGIDELLEAARILK 214 (359)
T ss_pred ceEEecCCCCChhhcCccccc--------------------------c--CCCCcEEEEEeccccccCHHHHHHHHHHHH
Confidence 467788999998766543211 0 356789999999999999999999999998
Q ss_pred ccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHH-HHHHcCCCCcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCC
Q 002909 601 RLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHT-LIEKYQLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEA 679 (867)
Q Consensus 601 ~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~-li~~~~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~Eg 679 (867)
+..++++|+|+|++... ..... ++.+++..++|+|+|+ .+++..++.. ||++++||..|+
T Consensus 215 ~~~~~~~l~i~G~~~~~------------~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-adi~i~ps~~e~ 275 (359)
T cd03808 215 AKGPNVRLLLVGDGDEE------------NPAAILEIEKLGLEGRVEFLGF------RDDVPELLAA-ADVFVLPSYREG 275 (359)
T ss_pred hcCCCeEEEEEcCCCcc------------hhhHHHHHHhcCCcceEEEeec------cccHHHHHHh-ccEEEecCcccC
Confidence 87889999999998761 11111 3667778899999996 2357777776 999999999999
Q ss_pred CCHHHHHHHHcCCCEEecCCCCccceeecCceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHH
Q 002909 680 FGLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWK 759 (867)
Q Consensus 680 fGltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~ 759 (867)
||++++|||+||+|||+|+.+|..|++.++.+|++++++|+++++++|.+++ .|++.+.++++++++++.++|||+
T Consensus 276 ~~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~~ 351 (359)
T cd03808 276 LPRVLLEAMAMGRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLI----EDPELRARMGQAARKRAEEEFDEE 351 (359)
T ss_pred cchHHHHHHHcCCCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhcCHH
Confidence 9999999999999999999999999999999999999999999999999887 899999999999999999999999
Q ss_pred HHHHHHH
Q 002909 760 IYANKVL 766 (867)
Q Consensus 760 ~~a~~ll 766 (867)
.++++++
T Consensus 352 ~~~~~~~ 358 (359)
T cd03808 352 IVVKKLL 358 (359)
T ss_pred HHHHHhh
Confidence 9998875
No 57
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=100.00 E-value=4e-31 Score=289.59 Aligned_cols=284 Identities=26% Similarity=0.402 Sum_probs=230.6
Q ss_pred CCCCeEEEECCCCh-HHHHHHHHHhcCCcEEEEEcCCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCH
Q 002909 407 EGKPDLIIGNYSDG-NLVASLMASKLGITQATIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTY 485 (867)
Q Consensus 407 ~~kPDIIh~h~~~~-~l~a~lla~~~gip~V~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~ 485 (867)
..+||+||+|+... ...+..+++..++|++++.|+.......... .........++.+|.++++|+
T Consensus 91 ~~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~-------------~~~~~~~~~~~~~d~ii~~s~ 157 (377)
T cd03798 91 RFRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR-------------LLRALLRRALRRADAVIAVSE 157 (377)
T ss_pred cCCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh-------------hHHHHHHHHHhcCCeEEeCCH
Confidence 36999999996544 5566777788899999999986654422111 111123447889999999998
Q ss_pred HHHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccccc
Q 002909 486 QEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEH 565 (867)
Q Consensus 486 ~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~ 565 (867)
...+...+. +++ ..++.+++||+|...+.+...... ..
T Consensus 158 ~~~~~~~~~--------------------~~~--~~~~~~i~~~~~~~~~~~~~~~~~--------------------~~ 195 (377)
T cd03798 158 ALADELKAL--------------------GID--PEKVTVIPNGVDTERFSPADRAEA--------------------RK 195 (377)
T ss_pred HHHHHHHHh--------------------cCC--CCceEEcCCCcCcccCCCcchHHH--------------------Hh
Confidence 776633221 111 678999999999988776543221 01
Q ss_pred cccccCCCCcEEEEEeccCCcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcE
Q 002909 566 IGYLADRKKPIIFSMARLDTVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQF 645 (867)
Q Consensus 566 lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V 645 (867)
.+. ..+++.++++|++.+.||++.+++++..+.+..++++++|+|.+.. .+.+.+.++++++.++|
T Consensus 196 ~~~--~~~~~~i~~~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~~~------------~~~~~~~~~~~~~~~~v 261 (377)
T cd03798 196 LGL--PEDKKVILFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGPL------------REALEALAAELGLEDRV 261 (377)
T ss_pred ccC--CCCceEEEEeccCccccCHHHHHHHHHHHHhcCCCeEEEEEcCCcc------------hHHHHHHHHhcCCcceE
Confidence 122 4577899999999999999999999999988778999999999865 45677788888999999
Q ss_pred EEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCCccceeecCceEEEeCCCCHHHHHH
Q 002909 646 RWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDPNNGDESSN 725 (867)
Q Consensus 646 ~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~p~d~e~lA~ 725 (867)
.+.|+ ++.+++..++.. ||++++|+..|++|++++|||+||+|||+++.|+..|++.++.+|++++++|++++++
T Consensus 262 ~~~g~----~~~~~~~~~~~~-ad~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~ 336 (377)
T cd03798 262 TFLGA----VPHEEVPAYYAA-ADVFVLPSLREGFGLVLLEAMACGLPVVATDVGGIPEIITDGENGLLVPPGDPEALAE 336 (377)
T ss_pred EEeCC----CCHHHHHHHHHh-cCeeecchhhccCChHHHHHHhcCCCEEEecCCChHHHhcCCcceeEECCCCHHHHHH
Confidence 99995 556789999997 9999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Q 002909 726 KIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKVLNMGS 770 (867)
Q Consensus 726 aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll~ly~ 770 (867)
+|.+++ .++.. +++.++++.+.+.|||+.+++++.++++
T Consensus 337 ~i~~~~----~~~~~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 375 (377)
T cd03798 337 AILRLL----ADPWL--RLGRAARRRVAERFSWENVAERLLELYR 375 (377)
T ss_pred HHHHHh----cCcHH--HHhHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 999988 77776 7888999999999999999999998653
No 58
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=100.00 E-value=2e-31 Score=289.74 Aligned_cols=272 Identities=20% Similarity=0.257 Sum_probs=211.1
Q ss_pred CCCeEEEECCC-ChHHHHHHHHHhcCCcEEEEEcCCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHH
Q 002909 408 GKPDLIIGNYS-DGNLVASLMASKLGITQATIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQ 486 (867)
Q Consensus 408 ~kPDIIh~h~~-~~~l~a~lla~~~gip~V~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~ 486 (867)
.+||+||+|.. ...+.+.+..+. ++|.+++.|+............+ ......++.+|.+++.|..
T Consensus 80 ~~~dii~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~d~ii~~s~~ 145 (353)
T cd03811 80 EKPDVVISHLTTTPNVLALLAARL-GTKLIVWEHNSLSLELKRKLRLL-------------LLIRKLYRRADKIVAVSEG 145 (353)
T ss_pred cCCCEEEEcCccchhHHHHHHhhc-CCceEEEEcCcchhhhccchhHH-------------HHHHhhccccceEEEeccc
Confidence 38999999987 554555544444 89999999987654432111100 1234478999999999987
Q ss_pred HHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhccccccccc
Q 002909 487 EIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHI 566 (867)
Q Consensus 487 ~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~l 566 (867)
.++.+.+.. +.+ ..++.+||||+|...+.+...... ..
T Consensus 146 ~~~~~~~~~-------------------~~~--~~~~~vi~~~~~~~~~~~~~~~~~---------------------~~ 183 (353)
T cd03811 146 VKEDLLKLL-------------------GIP--PDKIEVIYNPIDIEEIRALAEEPL---------------------EL 183 (353)
T ss_pred hhhhHHHhh-------------------cCC--ccccEEecCCcChhhcCcccchhh---------------------hc
Confidence 655322211 111 468999999999887765433211 01
Q ss_pred ccccCCCCcEEEEEeccCCcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEE
Q 002909 567 GYLADRKKPIIFSMARLDTVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFR 646 (867)
Q Consensus 567 Gll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~ 646 (867)
+. ..++++|+++||+.+.||++.+++++..+.+..++++|+++|+++. .+.+.++++++++.++|.
T Consensus 184 ~~--~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v~ 249 (353)
T cd03811 184 GI--PPDGPVILAVGRLSPQKGFDTLIRAFALLRKEGPDARLVILGDGPL------------REELEALAKELGLADRVH 249 (353)
T ss_pred CC--CCCceEEEEEecchhhcChHHHHHHHHHhhhcCCCceEEEEcCCcc------------HHHHHHHHHhcCCCccEE
Confidence 22 5677899999999999999999999999988778999999999865 456778889999999999
Q ss_pred EcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCCccceeecCceEEEeCCCCHHHHHHH
Q 002909 647 WIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDPNNGDESSNK 726 (867)
Q Consensus 647 flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~p~d~e~lA~a 726 (867)
|.|+.. ++..+++. +|++++||.+|++|++++|||+||+|||+|+.||..|++.++.+|++++++|.+++++.
T Consensus 250 ~~g~~~------~~~~~~~~-~d~~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~ 322 (353)
T cd03811 250 FLGFQS------NPYPYLKA-ADLFVLSSRYEGFPNVLLEAMALGTPVVATDCPGPREILEDGENGLLVPVGDEAALAAA 322 (353)
T ss_pred EecccC------CHHHHHHh-CCEEEeCcccCCCCcHHHHHHHhCCCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHH
Confidence 999743 35667776 99999999999999999999999999999999999999999999999999999999543
Q ss_pred HHHHHHHhhcCHHHHHHHHHHHHHHHHHhCC
Q 002909 727 IADFFEKCKTDAGYWNQMSAAGRQRIYECYT 757 (867)
Q Consensus 727 I~~ll~~~~~dp~~~~~m~~~ar~~v~~~ys 757 (867)
+..+ ..+..+++.+.++++++++.+.++|+
T Consensus 323 ~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (353)
T cd03811 323 ALAL-LDLLLDPELRERLAAAARERVAREYS 352 (353)
T ss_pred HHHH-HhccCChHHHHHHHHHHHHHHHHHhc
Confidence 3332 44558999999999989999888886
No 59
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=100.00 E-value=3.8e-32 Score=309.25 Aligned_cols=283 Identities=13% Similarity=0.138 Sum_probs=206.0
Q ss_pred CCCeEEEECCCChHHHHHHHH-HhcCCcEEEEEcCCcccccccchh--hhhhcCccccch--hhhhHHHHHHhcCCEEEe
Q 002909 408 GKPDLIIGNYSDGNLVASLMA-SKLGITQATIAHALEKSKYEDSDA--KWKELDPKYHFS--CQFTADLIAMNQTDFIIT 482 (867)
Q Consensus 408 ~kPDIIh~h~~~~~l~a~lla-~~~gip~V~t~H~l~~~~~~~s~~--~~~~~~~~y~f~--~~~~~e~ial~~aD~IIa 482 (867)
.++|+||++..... ..+. +..++|.|++.|+++...+..... .+. ....|+.. .....|+..++.+|.|++
T Consensus 103 ~~~D~v~~~~~~~~---~~~~~~~~~~p~i~~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~e~~~~~~ad~vi~ 178 (397)
T TIGR03087 103 EPVDAIVVFSSAMA---QYVTPHVRGVPRIVDFVDVDSDKWLQYARTKRWP-LRWIYRREGRLLLAYERAIAARFDAATF 178 (397)
T ss_pred CCCCEEEEeccccc---eeccccccCCCeEeehhhHHHHHHHHHHhccCcc-hhHHHHHHHHHHHHHHHHHHhhCCeEEE
Confidence 58999999875432 2222 356899999999865332211000 000 00011110 011246668899999999
Q ss_pred cCHHHHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhccccc
Q 002909 483 STYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDN 562 (867)
Q Consensus 483 ~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~ 562 (867)
+|+.+++.+++.. +.. ..++.+||||+|.+.|.|......
T Consensus 179 ~S~~~~~~l~~~~-------------------~~~--~~~v~vipngvd~~~f~~~~~~~~------------------- 218 (397)
T TIGR03087 179 VSRAEAELFRRLA-------------------PEA--AGRITAFPNGVDADFFSPDRDYPN------------------- 218 (397)
T ss_pred cCHHHHHHHHHhC-------------------CCC--CCCeEEeecccchhhcCCCccccC-------------------
Confidence 9998876433210 111 468999999999988866432110
Q ss_pred ccccccccCCCCcEEEEEeccCCcCChHHHH----HHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHH
Q 002909 563 SEHIGYLADRKKPIIFSMARLDTVKNITGLT----EWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEK 638 (867)
Q Consensus 563 ~~~lGll~~~~k~iIl~vGRL~~~Kgid~Li----eA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~ 638 (867)
.+ .+++++|+|+||+++.||++.++ +++..+.+..++++|+|+|+|+. +. +++
T Consensus 219 ----~~--~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~l~ivG~g~~-------------~~----~~~ 275 (397)
T TIGR03087 219 ----PY--PPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAEFYIVGAKPS-------------PA----VRA 275 (397)
T ss_pred ----CC--CCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcEEEEECCCCh-------------HH----HHH
Confidence 01 34567899999999999999988 56666776778999999999864 12 233
Q ss_pred cCCCCcEEEcccccCCCChHHHHHHHHccCcEEEEcCC-CCCCCHHHHHHHHcCCCEEecCCCCccceeecCceEEEeCC
Q 002909 639 YQLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPAL-YEAFGLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDP 717 (867)
Q Consensus 639 ~~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~-~EgfGltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~p 717 (867)
++..++|+|+|+++ ++..+++. +|++|+||. .||+|++++|||+||+|||+|+.|+. .+...+++|++++
T Consensus 276 l~~~~~V~~~G~v~------~~~~~~~~-adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~-~i~~~~~~g~lv~- 346 (397)
T TIGR03087 276 LAALPGVTVTGSVA------DVRPYLAH-AAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAE-GIDALPGAELLVA- 346 (397)
T ss_pred hccCCCeEEeeecC------CHHHHHHh-CCEEEecccccCCcccHHHHHHHcCCCEEecCcccc-cccccCCcceEeC-
Confidence 44457899999754 36677776 999999997 69999999999999999999997643 3334456799986
Q ss_pred CCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Q 002909 718 NNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKVLNMGS 770 (867)
Q Consensus 718 ~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll~ly~ 770 (867)
+|+++++++|.+++ +|++.+++|+++|++++.++|||+..++++.++++
T Consensus 347 ~~~~~la~ai~~ll----~~~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~ 395 (397)
T TIGR03087 347 ADPADFAAAILALL----ANPAEREELGQAARRRVLQHYHWPRNLARLDALLE 395 (397)
T ss_pred CCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhc
Confidence 89999999999988 89999999999999999999999999999999753
No 60
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.3e-31 Score=300.57 Aligned_cols=436 Identities=17% Similarity=0.151 Sum_probs=296.3
Q ss_pred ceEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCCCCCCCCCCCCccccccC
Q 002909 281 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLIPNSKGTKCSQELEPIYD 360 (867)
Q Consensus 281 ~rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~~~~~g~~~~~~~e~i~~ 360 (867)
|||+.++....|- -.+||..-.+- .|.++|++.|++|+ |+.+..+.-... +....+.+..
T Consensus 1 M~Il~v~~E~~p~-------vK~GGLaDv~~--------alpk~L~~~g~~v~----v~lP~y~~~~~~-~~~~~~~~~~ 60 (487)
T COG0297 1 MKILFVASEIFPF-------VKTGGLADVVG--------ALPKALAKRGVDVR----VLLPSYPKVQKE-WRDLLKVVGK 60 (487)
T ss_pred CcceeeeeeecCc-------cccCcHHHHHH--------HhHHHHHhcCCeEE----EEcCCchhhhhh-hccccceeeE
Confidence 7899999887762 25899977666 45557888999999 888876632222 2221111100
Q ss_pred C-------CCeEEEEccCCC--ccc-c--cccccccc--cch------hhHHHHHHHHHHHHHHHcC--CCCeEEEECCC
Q 002909 361 T-------KHSHILRIPFKT--EQA-I--LPQWVSRF--DIY------PYLGRFAQDATAKILDLME--GKPDLIIGNYS 418 (867)
Q Consensus 361 ~-------~~v~I~rvp~~~--~~~-~--l~~~isr~--~i~------p~l~~f~~~~~~~i~~~l~--~kPDIIh~h~~ 418 (867)
. ....+....... -+. + ...+.+|. ..+ -....|.... -.+..... ..|||||+|.|
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~v~~~lid~~~~f~r~~~~~~~~~d~~~Rf~~F~~a~-~~~~~~~~~~~~pDIvH~hDW 139 (487)
T COG0297 61 FGVLKGGRAQLFIVKEYGKDGGVDLYLIDNPALFKRPDSTLYGYYDNAERFAFFSLAA-AELAPLGLISWLPDIVHAHDW 139 (487)
T ss_pred eeeeecccceEEEEEeecccCCCcEEEecChhhcCccccccCCCCcHHHHHHHHHHHH-HHHhhhcCCCCCCCEEEeecH
Confidence 0 001111111100 000 1 11122221 111 1122333322 23332322 37999999999
Q ss_pred ChHHHHHHHHH----hcCCcEEEEEcCCccccccc-chhhhhhcC-cccc-----chhhhhHHHHHHhcCCEEEecCHHH
Q 002909 419 DGNLVASLMAS----KLGITQATIAHALEKSKYED-SDAKWKELD-PKYH-----FSCQFTADLIAMNQTDFIITSTYQE 487 (867)
Q Consensus 419 ~~~l~a~lla~----~~gip~V~t~H~l~~~~~~~-s~~~~~~~~-~~y~-----f~~~~~~e~ial~~aD~IIa~S~~~ 487 (867)
.++++..+++. ...+|.|+|+|++....... ....+..+. ..|+ +..+....+-.+..||.|+++|+..
T Consensus 140 qt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ad~vttVSptY 219 (487)
T COG0297 140 QTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYADAVTTVSPTY 219 (487)
T ss_pred HHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheeccEEEEECHHH
Confidence 99999999988 45799999999986655322 111111111 0111 0112223445788999999999987
Q ss_pred HhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccccccc
Q 002909 488 IAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHIG 567 (867)
Q Consensus 488 ~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~lG 567 (867)
+..+... . .+..+.++... ...++.-|-||+|.+.+.|.++.......-.+....+..++...++++|
T Consensus 220 a~Ei~t~--~----~g~gl~g~l~~------~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~~~~g 287 (487)
T COG0297 220 AGEIYTP--E----YGEGLEGLLSW------RSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQERLG 287 (487)
T ss_pred HHhhccc--c----ccccchhhhhh------ccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHHHHhC
Confidence 7754411 1 11222222221 1457899999999999999877644322222333346667777888999
Q ss_pred cccCCCCcEEEEEeccCCcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEE
Q 002909 568 YLADRKKPIIFSMARLDTVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRW 647 (867)
Q Consensus 568 ll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~f 647 (867)
+..+.+.|++.++||+..+||++.+++++..+.+.. ++++|.|.|.. ...+.+..+++.+.. ++..
T Consensus 288 L~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~~~vilG~gd~----------~le~~~~~la~~~~~--~~~~ 353 (487)
T COG0297 288 LDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--WQLVLLGTGDP----------ELEEALRALASRHPG--RVLV 353 (487)
T ss_pred CCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--ceEEEEecCcH----------HHHHHHHHHHHhcCc--eEEE
Confidence 976778899999999999999999999999998754 99999999943 566788888888754 4544
Q ss_pred cccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCCccceeec--------CceEEEeCCCC
Q 002909 648 IAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIID--------GVSGFHIDPNN 719 (867)
Q Consensus 648 lG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG~~EiI~d--------g~~G~lv~p~d 719 (867)
.-.. +..+.+.+.+.+|++++||++|+||++-++||..|+++|++.+||.+|.|.+ ..+||.+.+.+
T Consensus 354 ~i~~-----~~~la~~i~agaD~~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~ 428 (487)
T COG0297 354 VIGY-----DEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTN 428 (487)
T ss_pred Eeee-----cHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEEecCC
Confidence 3321 3467777777799999999999999999999999999999999999999976 57999999999
Q ss_pred HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhH
Q 002909 720 GDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKVLNMGSI 771 (867)
Q Consensus 720 ~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll~ly~~ 771 (867)
+++++.+|...+.-...++..|+.+..+++. ..|+|+..+++|.++|+.
T Consensus 429 ~~~l~~al~rA~~~y~~~~~~w~~~~~~~m~---~d~sw~~sa~~y~~lY~~ 477 (487)
T COG0297 429 PDHLANALRRALVLYRAPPLLWRKVQPNAMG---ADFSWDLSAKEYVELYKP 477 (487)
T ss_pred HHHHHHHHHHHHHHhhCCHHHHHHHHHhhcc---cccCchhHHHHHHHHHHH
Confidence 9999999999886666666669999998877 689999999999997653
No 61
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=99.98 E-value=5.7e-30 Score=292.70 Aligned_cols=276 Identities=16% Similarity=0.210 Sum_probs=218.0
Q ss_pred CCCCeEEEECCCCh-HHHHHHHHHhcCCc-EEEEEcCCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecC
Q 002909 407 EGKPDLIIGNYSDG-NLVASLMASKLGIT-QATIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITST 484 (867)
Q Consensus 407 ~~kPDIIh~h~~~~-~l~a~lla~~~gip-~V~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S 484 (867)
..++|++|+++... +..+.++.++.+.+ +|.+.|+...... .....+. ......++.+|.|+++|
T Consensus 125 ~~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~~--------~~~~~~~-----~~~~~~~~~~d~ii~~S 191 (407)
T cd04946 125 DGQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYED--------RYPSGYI-----PLRRYLLSSLDAVFPCS 191 (407)
T ss_pred ccCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhhh--------hccccch-----HHHHHHHhcCCEEEECC
Confidence 46778999875444 44555667777776 8999997542210 0111111 11223578999999999
Q ss_pred HHHHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhccccccc
Q 002909 485 YQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSE 564 (867)
Q Consensus 485 ~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~ 564 (867)
....+.+++.++ .. ..++.+++||+|...+.+..
T Consensus 192 ~~~~~~l~~~~~-------------------~~--~~ki~vi~~gv~~~~~~~~~------------------------- 225 (407)
T cd04946 192 EQGRNYLQKRYP-------------------AY--KEKIKVSYLGVSDPGIISKP------------------------- 225 (407)
T ss_pred HHHHHHHHHHCC-------------------Cc--cccEEEEECCcccccccCCC-------------------------
Confidence 987764433222 12 56899999999976554320
Q ss_pred ccccccCCCCcEEEEEeccCCcCChHHHHHHHHHhHccCC--CeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCC
Q 002909 565 HIGYLADRKKPIIFSMARLDTVKNITGLTEWYGKNKRLRN--MVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQ 642 (867)
Q Consensus 565 ~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~--~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~ 642 (867)
..++++.|+++||+.+.||++.+++|+..+.+.++ ++.++++|+|+. .+.+++++++.++.
T Consensus 226 -----~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~~------------~~~l~~~~~~~~~~ 288 (407)
T cd04946 226 -----SKDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGPL------------EDTLKELAESKPEN 288 (407)
T ss_pred -----CCCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCchH------------HHHHHHHHHhcCCC
Confidence 03456789999999999999999999999988765 467788999865 56788888888888
Q ss_pred CcEEEcccccCCCChHHHHHHHHc-cCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCCccceeecCceEEEeCCC-CH
Q 002909 643 GQFRWIAAQTDRYRNGELYRCIAD-TKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDPN-NG 720 (867)
Q Consensus 643 ~~V~flG~~~d~v~~~el~~~la~-~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~p~-d~ 720 (867)
++|.|+|+ ++.+++..+++. .+|+|++||.+||+|++++|||+||+|||+|+.||..|++.++++|++++++ |+
T Consensus 289 ~~V~f~G~----v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G~l~~~~~~~ 364 (407)
T cd04946 289 ISVNFTGE----LSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLLLSKDPTP 364 (407)
T ss_pred ceEEEecC----CChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcEEEeCCCCCH
Confidence 99999996 445789988864 3789999999999999999999999999999999999999999999999875 89
Q ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 002909 721 DESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKVL 766 (867)
Q Consensus 721 e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll 766 (867)
++++++|.+++ +|++.+++|+++|++.+.++|||+...+++.
T Consensus 365 ~~la~~I~~ll----~~~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 365 NELVSSLSKFI----DNEEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 99999999988 7999999999999999999999999988774
No 62
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=99.98 E-value=8.4e-31 Score=305.44 Aligned_cols=279 Identities=21% Similarity=0.251 Sum_probs=210.2
Q ss_pred CCCCeEEEECCCChHHHHHHHHHhcCCcEEEEEcCCcccccccch--hhhhhcCccccchhhhhHHHHHHhcCCEEEecC
Q 002909 407 EGKPDLIIGNYSDGNLVASLMASKLGITQATIAHALEKSKYEDSD--AKWKELDPKYHFSCQFTADLIAMNQTDFIITST 484 (867)
Q Consensus 407 ~~kPDIIh~h~~~~~l~a~lla~~~gip~V~t~H~l~~~~~~~s~--~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S 484 (867)
..++||||++.+.....+ ++.....+|.+.++|+.......... ..|. ..|.+ .....+.+|.||++|
T Consensus 209 ~~~~di~i~dr~~~~~~~-~~~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~---~~y~~------~~~~~~~~D~iI~~S 278 (500)
T TIGR02918 209 LTKKDIIILDRSTGIGQA-VLENKGPAKLGVVVHAEHFSESATNETYILWN---NYYEY------QFSNADYIDFFITAT 278 (500)
T ss_pred CCCCCEEEEcCCcccchH-HHhcCCCceEEEEEChhhhcCccCcchhHHHH---HHHHH------HHhchhhCCEEEECC
Confidence 358999999875542223 44566689999999974322211110 1121 11111 112457789999999
Q ss_pred HHHHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhccccccc
Q 002909 485 YQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSE 564 (867)
Q Consensus 485 ~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~ 564 (867)
+..++.+.+.+++| +.. .+++.+||||++...+.|..
T Consensus 279 ~~~~~~l~~~~~~~----------------~~~--~~ki~viP~g~~~~~~~~~~------------------------- 315 (500)
T TIGR02918 279 DIQNQILKNQFKKY----------------YNI--EPRIYTIPVGSLDELQYPEQ------------------------- 315 (500)
T ss_pred HHHHHHHHHHhhhh----------------cCC--CCcEEEEcCCCcccccCccc-------------------------
Confidence 87666444433322 111 56899999998754433210
Q ss_pred ccccccCCCCcEEEEEeccCCcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCc
Q 002909 565 HIGYLADRKKPIIFSMARLDTVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQ 644 (867)
Q Consensus 565 ~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~ 644 (867)
..++..|+++||+.+.||++.|++|+.++.+..|+++|+|+|+|+. .+.++++++++++.++
T Consensus 316 ------~r~~~~il~vGrl~~~Kg~~~li~A~~~l~~~~p~~~l~i~G~G~~------------~~~l~~~i~~~~l~~~ 377 (500)
T TIGR02918 316 ------ERKPFSIITASRLAKEKHIDWLVKAVVKAKKSVPELTFDIYGEGGE------------KQKLQKIINENQAQDY 377 (500)
T ss_pred ------ccCCeEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEECchh------------HHHHHHHHHHcCCCCe
Confidence 2244679999999999999999999999998889999999999965 5778999999999999
Q ss_pred EEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCC-CccceeecCceEEEeCCC----C
Q 002909 645 FRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQG-GPAEIIIDGVSGFHIDPN----N 719 (867)
Q Consensus 645 V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~g-G~~EiI~dg~~G~lv~p~----d 719 (867)
|.|+|.. + +..+++. +|+||+||.+||||++++||||||+|||+|+++ |+.|+|.+|.+|++++++ |
T Consensus 378 V~f~G~~----~---~~~~~~~-adv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d 449 (500)
T TIGR02918 378 IHLKGHR----N---LSEVYKD-YELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDD 449 (500)
T ss_pred EEEcCCC----C---HHHHHHh-CCEEEEcCccccccHHHHHHHHhCCCEEEecCCCCCHHHccCCCCEEEEeCCccccc
Confidence 9999952 2 3444554 999999999999999999999999999999986 899999999999999843 3
Q ss_pred ----HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Q 002909 720 ----GDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKVLNMGS 770 (867)
Q Consensus 720 ----~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll~ly~ 770 (867)
++++|++|..++ + ++.+.+|+++|++.+ +.|||+.+++++.++++
T Consensus 450 ~~~~~~~la~~I~~ll----~-~~~~~~~~~~a~~~a-~~fs~~~v~~~w~~ll~ 498 (500)
T TIGR02918 450 EDQIITALAEKIVEYF----N-SNDIDAFHEYSYQIA-EGFLTANIIEKWKKLVR 498 (500)
T ss_pred hhHHHHHHHHHHHHHh----C-hHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHh
Confidence 778888887776 4 446899999999976 88999999999998654
No 63
>PLN02275 transferase, transferring glycosyl groups
Probab=99.97 E-value=2.3e-29 Score=284.29 Aligned_cols=327 Identities=12% Similarity=0.051 Sum_probs=217.0
Q ss_pred CcccchhHhHHHHHHHHHHHHHHHHHCCC-ceeeccEEEecCCCCCCCCCCCCccccccCCCCeEEEEccCCCccccccc
Q 002909 302 DTGGQVVYILDQVRALEEELLLRIKQQGL-SVKPQILVVTRLIPNSKGTKCSQELEPIYDTKHSHILRIPFKTEQAILPQ 380 (867)
Q Consensus 302 dtGG~~vyvld~araL~~eLa~~L~~~Gh-eV~~~V~VvT~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~l~~ 380 (867)
|.|+..+.. +++.+|+++|| +|+ |++... .+ .........+++|.++|...... .
T Consensus 14 ~~g~~~r~~---------~~~~~l~~~~~~~v~----vi~~~~---~~-----~~~~~~~~~~v~v~r~~~~~~~~---~ 69 (371)
T PLN02275 14 DFGRSPRMQ---------YHALSLARQASFQVD----VVAYGG---SE-----PIPALLNHPSIHIHLMVQPRLLQ---R 69 (371)
T ss_pred CCCCCHHHH---------HHHHHHHhcCCceEE----EEEecC---CC-----CCHHHhcCCcEEEEECCCccccc---c
Confidence 566665544 35667888886 799 887521 11 11122234479999998521110 0
Q ss_pred ccccccchh---hHHH---HHHHHHHHHHHHcCCCCeEEEECCCCh---HHHHHHHHHhcCCcEEEEEcCCcccccccch
Q 002909 381 WVSRFDIYP---YLGR---FAQDATAKILDLMEGKPDLIIGNYSDG---NLVASLMASKLGITQATIAHALEKSKYEDSD 451 (867)
Q Consensus 381 ~isr~~i~p---~l~~---f~~~~~~~i~~~l~~kPDIIh~h~~~~---~l~a~lla~~~gip~V~t~H~l~~~~~~~s~ 451 (867)
+ ..++. |+.. +...+...+.. ...+||+||+|.+.. .+.+.++++..++|+|++.|+++..... .+
T Consensus 70 -~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~-~~ 144 (371)
T PLN02275 70 -L--PRVLYALALLLKVAIQFLMLLWFLCV-KIPRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYTLLA-LS 144 (371)
T ss_pred -c--ccchHHHHHHHHHHHHHHHHHHHHHh-hCCCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHHHHh-cc
Confidence 1 11222 2221 11122222211 146999999986443 4466677788899999999986421100 00
Q ss_pred hhhhhcCccccchhhhhHHHHHHhcCCEEEecCHHHHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCC
Q 002909 452 AKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGAD 531 (867)
Q Consensus 452 ~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD 531 (867)
. ......+.+. ...++..++.+|.||++|+...+.+.+. .|+ ++.+|+||+
T Consensus 145 ~--~~~~~~~~~~--~~~e~~~~~~ad~ii~~S~~~~~~l~~~-------------------~g~-----~i~vi~n~~- 195 (371)
T PLN02275 145 L--GRSHPLVRLY--RWYERHYGKMADGHLCVTKAMQHELDQN-------------------WGI-----RATVLYDQP- 195 (371)
T ss_pred c--CCCCHHHHHH--HHHHHHHHhhCCEEEECCHHHHHHHHHh-------------------cCC-----CeEEECCCC-
Confidence 0 0000011111 1236668899999999998876532211 122 278999995
Q ss_pred CCCCCCCchHhhhhccCCcchHHhhhcccccccccccccCCCCcEEEEEeccCCcCChHHHHHHHHHhH-----------
Q 002909 532 QSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHIGYLADRKKPIIFSMARLDTVKNITGLTEWYGKNK----------- 600 (867)
Q Consensus 532 ~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~----------- 600 (867)
.+.|.|...... +. .+...+++++||+.+.||++.+++|+..+.
T Consensus 196 ~~~f~~~~~~~~----------------------~~---~~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~~~~~ 250 (371)
T PLN02275 196 PEFFRPASLEIR----------------------LR---PNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNESD 250 (371)
T ss_pred HHHcCcCCchhc----------------------cc---CCCcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhcccccc
Confidence 456655422100 00 223457889999999999999999998874
Q ss_pred ------ccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccccCCCChHHHHHHHHccCcEEEEc
Q 002909 601 ------RLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQP 674 (867)
Q Consensus 601 ------~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~P 674 (867)
+..++++|+|+|+|+. .++++++++++++++ +.|.+. .++.+++..+|+. ||+||.|
T Consensus 251 ~~~~~~~~~~~i~l~ivG~G~~------------~~~l~~~~~~~~l~~-v~~~~~---~~~~~~~~~~l~~-aDv~v~~ 313 (371)
T PLN02275 251 SASGKQSLYPRLLFIITGKGPQ------------KAMYEEKISRLNLRH-VAFRTM---WLEAEDYPLLLGS-ADLGVSL 313 (371)
T ss_pred ccccccccCCCeEEEEEeCCCC------------HHHHHHHHHHcCCCc-eEEEcC---CCCHHHHHHHHHh-CCEEEEe
Confidence 2357899999999976 578899999999965 887652 2446789999997 9999986
Q ss_pred C---CCCCCCHHHHHHHHcCCCEEecCCCCccceeecCceEEEeCCCCHHHHHHHHHHH
Q 002909 675 A---LYEAFGLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDPNNGDESSNKIADF 730 (867)
Q Consensus 675 S---~~EgfGltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~p~d~e~lA~aI~~l 730 (867)
+ ..|+||++++||||||+|||+|+.||..|+|.++++|++++ |+++++++|.++
T Consensus 314 ~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~eiv~~g~~G~lv~--~~~~la~~i~~l 370 (371)
T PLN02275 314 HTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELVKDGKNGLLFS--SSSELADQLLEL 370 (371)
T ss_pred ccccccccccHHHHHHHHCCCCEEEecCCChHHHccCCCCeEEEC--CHHHHHHHHHHh
Confidence 3 24899999999999999999999999999999999999997 799999999765
No 64
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.97 E-value=4.1e-29 Score=288.65 Aligned_cols=273 Identities=10% Similarity=0.118 Sum_probs=195.9
Q ss_pred CCCeEEEECCCCh-HHH--HHHHHHhcCCcEEEEEcCCccccccc-chhhhhhcCccccchhhhhHHHHHHhcCCEEEec
Q 002909 408 GKPDLIIGNYSDG-NLV--ASLMASKLGITQATIAHALEKSKYED-SDAKWKELDPKYHFSCQFTADLIAMNQTDFIITS 483 (867)
Q Consensus 408 ~kPDIIh~h~~~~-~l~--a~lla~~~gip~V~t~H~l~~~~~~~-s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~ 483 (867)
..|||||.+.+.. ++. +..++++++ |+|.++|+.... |.. ....+ .-.+........+.-.+||.|++.
T Consensus 433 f~PDVVHLatP~~LGw~~~Glr~ArKl~-PVVasyHTny~e-Yl~~y~~g~-----L~~~llk~l~~~v~r~hcD~VIaP 505 (794)
T PLN02501 433 KDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLE-YIKREKNGA-----LQAFFVKHINNWVTRAYCHKVLRL 505 (794)
T ss_pred cCCCEEEECCchhhccHHHHHHHHHHcC-CeEEEEeCCcHH-HHhHhcchh-----HHHHHHHHHHHHHHHhhCCEEEcC
Confidence 5899999998754 666 888999999 899999986543 211 00000 000001010011111238999999
Q ss_pred CHHHHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccc
Q 002909 484 TYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNS 563 (867)
Q Consensus 484 S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~ 563 (867)
|..... . + ...+..| ||||.+.|.|......+
T Consensus 506 S~atq~-L---------------~------------~~vI~nV-nGVDte~F~P~~r~~~~------------------- 537 (794)
T PLN02501 506 SAATQD-L---------------P------------KSVICNV-HGVNPKFLKIGEKVAEE------------------- 537 (794)
T ss_pred CHHHHH-h---------------c------------ccceeec-ccccccccCCcchhHHH-------------------
Confidence 965442 0 0 1112222 69999999887553322
Q ss_pred cccccccCCCCcEEEEEeccCCcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCC
Q 002909 564 EHIGYLADRKKPIIFSMARLDTVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQG 643 (867)
Q Consensus 564 ~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~ 643 (867)
..+|. ....+.++|+|||.+.||++.|++|++.+.+..++++|+|+|+|+. .+.++++++++++
T Consensus 538 r~lgi--~~~~kgiLfVGRLa~EKGld~LLeAla~L~~~~pnvrLvIVGDGP~------------reeLe~la~eLgL-- 601 (794)
T PLN02501 538 RELGQ--QAFSKGAYFLGKMVWAKGYRELIDLLAKHKNELDGFNLDVFGNGED------------AHEVQRAAKRLDL-- 601 (794)
T ss_pred HhcCC--ccccCceEEEEcccccCCHHHHHHHHHHHHhhCCCeEEEEEcCCcc------------HHHHHHHHHHcCC--
Confidence 12343 2233458999999999999999999999887778999999999987 5778888888887
Q ss_pred cEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCCccceeecCceEEEeCCCCHHHH
Q 002909 644 QFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDPNNGDES 723 (867)
Q Consensus 644 ~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~p~d~e~l 723 (867)
+|.|+|...+ ...+|+. +|+||+||.+|+||++++||||||+|||+++.+|. +++.++.+|+.+ +|++++
T Consensus 602 ~V~FLG~~dd------~~~lyas-aDVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~-e~V~~g~nGll~--~D~Eaf 671 (794)
T PLN02501 602 NLNFLKGRDH------ADDSLHG-YKVFINPSISDVLCTATAEALAMGKFVVCADHPSN-EFFRSFPNCLTY--KTSEDF 671 (794)
T ss_pred EEEecCCCCC------HHHHHHh-CCEEEECCCcccchHHHHHHHHcCCCEEEecCCCC-ceEeecCCeEec--CCHHHH
Confidence 4899996543 2345665 99999999999999999999999999999999985 457778888875 699999
Q ss_pred HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhH
Q 002909 724 SNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKVLNMGSI 771 (867)
Q Consensus 724 A~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll~ly~~ 771 (867)
+++|.+++ .|+..+..+.+ ...|||+..++++++..++
T Consensus 672 AeAI~~LL----sd~~~rl~~~a------~~~~SWeAaadrLle~~~~ 709 (794)
T PLN02501 672 VAKVKEAL----ANEPQPLTPEQ------RYNLSWEAATQRFMEYSDL 709 (794)
T ss_pred HHHHHHHH----hCchhhhHHHH------HhhCCHHHHHHHHHHhhcc
Confidence 99999998 66654433321 2489999999999996544
No 65
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.97 E-value=1.3e-29 Score=282.70 Aligned_cols=264 Identities=20% Similarity=0.251 Sum_probs=189.8
Q ss_pred CCCCeEEEECCCChHHHHHHHHHhcCCcEEEEEcCCcccccccchhh------hhhcCccccchhhhhHHHHHHhcCCEE
Q 002909 407 EGKPDLIIGNYSDGNLVASLMASKLGITQATIAHALEKSKYEDSDAK------WKELDPKYHFSCQFTADLIAMNQTDFI 480 (867)
Q Consensus 407 ~~kPDIIh~h~~~~~l~a~lla~~~gip~V~t~H~l~~~~~~~s~~~------~~~~~~~y~f~~~~~~e~ial~~aD~I 480 (867)
..++|+||++...... .+....++|.+.+.|.....-+.....+ +......+-+......+..+++++|.|
T Consensus 81 ~~~~D~v~~~~~~~~~---~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i 157 (351)
T cd03804 81 LSGYDLVISSSHAVAK---GVITRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAARVDYF 157 (351)
T ss_pred ccCCCEEEEcCcHHhc---cccCCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHhcCCCEE
Confidence 3589999987643222 1225567888888886321111000000 000000000111112344568999999
Q ss_pred EecCHHHHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhccc
Q 002909 481 ITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKE 560 (867)
Q Consensus 481 Ia~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~ 560 (867)
+++|+..++.+.+. +..+..+|+||+|.+.|.+..
T Consensus 158 i~~S~~~~~~~~~~------------------------~~~~~~vi~~~~d~~~~~~~~--------------------- 192 (351)
T cd03804 158 IANSRFVARRIKKY------------------------YGRDATVIYPPVDTDRFTPAE--------------------- 192 (351)
T ss_pred EECCHHHHHHHHHH------------------------hCCCcEEECCCCCHhhcCcCC---------------------
Confidence 99999877633221 033567999999987665431
Q ss_pred ccccccccccCCCCcEEEEEeccCCcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcC
Q 002909 561 DNSEHIGYLADRKKPIIFSMARLDTVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQ 640 (867)
Q Consensus 561 ~~~~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~ 640 (867)
..++.++++||+.+.||++.+++|+..+. ++|+|+|+|+. .+.+++ +
T Consensus 193 -----------~~~~~il~~G~~~~~K~~~~li~a~~~~~-----~~l~ivG~g~~------------~~~l~~-----~ 239 (351)
T cd03804 193 -----------EKEDYYLSVGRLVPYKRIDLAIEAFNKLG-----KRLVVIGDGPE------------LDRLRA-----K 239 (351)
T ss_pred -----------CCCCEEEEEEcCccccChHHHHHHHHHCC-----CcEEEEECChh------------HHHHHh-----h
Confidence 23457899999999999999999998763 78999999865 233332 4
Q ss_pred CCCcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCCccceeecCceEEEeCCCCH
Q 002909 641 LQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDPNNG 720 (867)
Q Consensus 641 L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~p~d~ 720 (867)
..++|+|+|+ ++.+++..+++. ||++++||. |+||++++|||+||+|||+++.||..|++.++.+|++++++|+
T Consensus 240 ~~~~V~~~g~----~~~~~~~~~~~~-ad~~v~ps~-e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~~~G~~~~~~~~ 313 (351)
T cd03804 240 AGPNVTFLGR----VSDEELRDLYAR-ARAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGILFEEQTV 313 (351)
T ss_pred cCCCEEEecC----CCHHHHHHHHHh-CCEEEECCc-CCCCchHHHHHHcCCCEEEeCCCCCcceeeCCCCEEEeCCCCH
Confidence 5689999995 556889999997 999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 002909 721 DESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKV 765 (867)
Q Consensus 721 e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~l 765 (867)
++++++|..++ +|++ .+.+++++++ ++|+|+.+.+++
T Consensus 314 ~~la~~i~~l~----~~~~---~~~~~~~~~~-~~~~~~~~~~~~ 350 (351)
T cd03804 314 ESLAAAVERFE----KNED---FDPQAIRAHA-ERFSESRFREKI 350 (351)
T ss_pred HHHHHHHHHHH----hCcc---cCHHHHHHHH-HhcCHHHHHHHh
Confidence 99999998888 6763 2334444554 579999998775
No 66
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.97 E-value=3.7e-29 Score=281.05 Aligned_cols=273 Identities=21% Similarity=0.257 Sum_probs=211.7
Q ss_pred CCCeEEEECCCChHHHHHHHHHhcCCcEEEEEcCCcccccccc-hhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHH
Q 002909 408 GKPDLIIGNYSDGNLVASLMASKLGITQATIAHALEKSKYEDS-DAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQ 486 (867)
Q Consensus 408 ~kPDIIh~h~~~~~l~a~lla~~~gip~V~t~H~l~~~~~~~s-~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~ 486 (867)
.++|+||++....... .++......+.+.++|+......... ...|+ ..|.. ....++.+|.||++|+.
T Consensus 98 ~~~diii~~~~~~~~~-~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~---~~~~~------~~~~~~~~d~ii~~s~~ 167 (372)
T cd04949 98 TKPDVFILDRPTLDGQ-ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLIN---NFYEY------VFENLDKVDGVIVATEQ 167 (372)
T ss_pred CCCCEEEECCccccch-hHHhccCCceEEEEEChHHhCCcccccccccc---hhhHH------HHhChhhCCEEEEccHH
Confidence 6899999987655333 23344456677888997432221110 00111 11111 11235789999999988
Q ss_pred HHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhccccccccc
Q 002909 487 EIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHI 566 (867)
Q Consensus 487 ~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~l 566 (867)
.++.+.+.++ . ..++.+||||++...+.+....
T Consensus 168 ~~~~l~~~~~-------------------~---~~~v~~ip~g~~~~~~~~~~~~------------------------- 200 (372)
T cd04949 168 QKQDLQKQFG-------------------N---YNPIYTIPVGSIDPLKLPAQFK------------------------- 200 (372)
T ss_pred HHHHHHHHhC-------------------C---CCceEEEcccccChhhcccchh-------------------------
Confidence 7764433211 0 2348899999998766553200
Q ss_pred ccccCCCCcEEEEEeccCCcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEE
Q 002909 567 GYLADRKKPIIFSMARLDTVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFR 646 (867)
Q Consensus 567 Gll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~ 646 (867)
..++..++++||+.+.||++.+++++.++.+..++++|+|+|.|.. ...+..+++++++.++|.
T Consensus 201 ----~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~v~ 264 (372)
T cd04949 201 ----QRKPHKIITVARLAPEKQLDQLIKAFAKVVKQVPDATLDIYGYGDE------------EEKLKELIEELGLEDYVF 264 (372)
T ss_pred ----hcCCCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcEEEEEEeCch------------HHHHHHHHHHcCCcceEE
Confidence 3355689999999999999999999999998889999999999865 456777788899999999
Q ss_pred EcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCC-CccceeecCceEEEeCCCCHHHHHH
Q 002909 647 WIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQG-GPAEIIIDGVSGFHIDPNNGDESSN 725 (867)
Q Consensus 647 flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~g-G~~EiI~dg~~G~lv~p~d~e~lA~ 725 (867)
|.|+.. ++.++++. ||++|+||..|+||++++|||+||+|||+++.+ |+.+++.++.+|++++++|++++++
T Consensus 265 ~~g~~~------~~~~~~~~-ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~lv~~~d~~~la~ 337 (372)
T cd04949 265 LKGYTR------DLDEVYQK-AQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGENGYLVPKGDIEALAE 337 (372)
T ss_pred EcCCCC------CHHHHHhh-hhEEEecccccccChHHHHHHhCCCCEEEecCCCCcHHHcccCCCceEeCCCcHHHHHH
Confidence 999533 46677776 999999999999999999999999999999987 8999999999999999999999999
Q ss_pred HHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 002909 726 KIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKV 765 (867)
Q Consensus 726 aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~l 765 (867)
+|..++ .|++.+++|++++++.+ ++|||+.++++|
T Consensus 338 ~i~~ll----~~~~~~~~~~~~a~~~~-~~~s~~~~~~~w 372 (372)
T cd04949 338 AIIELL----NDPKLLQKFSEAAYENA-ERYSEENVWEKW 372 (372)
T ss_pred HHHHHH----cCHHHHHHHHHHHHHHH-HHhhHHHHHhcC
Confidence 999998 89999999999999995 899999998764
No 67
>PHA01630 putative group 1 glycosyl transferase
Probab=99.96 E-value=3.6e-28 Score=269.90 Aligned_cols=258 Identities=11% Similarity=0.094 Sum_probs=188.9
Q ss_pred ECCCChHHHHHHHHHhcCCcEEEEEcCCcccccccchhhhhhcCccccchhhhhHHHHH-HhcCCEEEecCHHHHhhcCC
Q 002909 415 GNYSDGNLVASLMASKLGITQATIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIA-MNQTDFIITSTYQEIAGSKD 493 (867)
Q Consensus 415 ~h~~~~~l~a~lla~~~gip~V~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ia-l~~aD~IIa~S~~~~~~~k~ 493 (867)
.|+....+..+....+.|+|+|+++|+..... .. .+... .+.+|.||++|....+.+.+
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~------------------~~--~~~~~~~~~ad~ii~~S~~~~~~l~~ 111 (331)
T PHA01630 52 YYTIFNSMLFWKGIPHVGKNIVFEVADTDAIS------------------HT--ALYFFRNQPVDEIVVPSQWSKNAFYT 111 (331)
T ss_pred ehhhhhHHHHHhhccccCCceEEEEEeechhh------------------HH--HHHHHhhccCCEEEECCHHHHHHHHH
Confidence 55544455555555678999999999822111 00 12224 57899999999887763321
Q ss_pred CCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccccccccccCCC
Q 002909 494 RPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHIGYLADRK 573 (867)
Q Consensus 494 ~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~lGll~~~~ 573 (867)
.|++. ..++.+||||+|.+.|.|.... ..+
T Consensus 112 --------------------~g~~~-~~~i~vIpNGVd~~~f~~~~~~-----------------------------~~~ 141 (331)
T PHA01630 112 --------------------SGLKI-PQPIYVIPHNLNPRMFEYKPKE-----------------------------KPH 141 (331)
T ss_pred --------------------cCCCC-CCCEEEECCCCCHHHcCCCccc-----------------------------cCC
Confidence 12221 3579999999998877654210 124
Q ss_pred CcEEEEEeccCCcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccccC
Q 002909 574 KPIIFSMARLDTVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTD 653 (867)
Q Consensus 574 k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d 653 (867)
+.+++++|++.+.||++.|++|++.+.+..++++++|+|++.. ..++ .++.+ +.|
T Consensus 142 ~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~llivG~~~~------------~~~l------~~~~~---~~~---- 196 (331)
T PHA01630 142 PCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFYFLIKSSNML------------DPRL------FGLNG---VKT---- 196 (331)
T ss_pred CEEEEEeccccccCCHHHHHHHHHHHHhhCCCEEEEEEeCccc------------chhh------ccccc---eec----
Confidence 4577788899999999999999999988778999999997643 0111 12222 233
Q ss_pred CCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCCccceeecCceEEEeCC----------------
Q 002909 654 RYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDP---------------- 717 (867)
Q Consensus 654 ~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~p---------------- 717 (867)
.++.+++..+|+. ||+||+||.+|+||++++||||||+|||+|+.||..|++.++.+|+++++
T Consensus 197 ~v~~~~l~~~y~~-aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~ 275 (331)
T PHA01630 197 PLPDDDIYSLFAG-CDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGY 275 (331)
T ss_pred cCCHHHHHHHHHh-CCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCccccc
Confidence 3556899999997 99999999999999999999999999999999999999999988887753
Q ss_pred ---CCHHHHHHHHHHHHHHhhcC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhHH
Q 002909 718 ---NNGDESSNKIADFFEKCKTD--AGYWNQMSAAGRQRIYECYTWKIYANKVLNMGSIY 772 (867)
Q Consensus 718 ---~d~e~lA~aI~~ll~~~~~d--p~~~~~m~~~ar~~v~~~ysw~~~a~~ll~ly~~~ 772 (867)
.|.+++++++.+++ .| ++.++++..++...+.++|||+.++++++++|+.|
T Consensus 276 ~v~~~~~~~~~~ii~~l----~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~~ 331 (331)
T PHA01630 276 FLDPDIEDAYQKLLEAL----ANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEKY 331 (331)
T ss_pred ccCCCHHHHHHHHHHHH----hCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcC
Confidence 37788888888887 44 24444445555555679999999999999987643
No 68
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.96 E-value=3.6e-27 Score=270.67 Aligned_cols=331 Identities=14% Similarity=0.128 Sum_probs=206.8
Q ss_pred CCCCeEEEECCCChHHHHHHHH-HhcCCcEEEEEcCCcccccccch---hh-------hhhcCccccchhhhhHHHHHHh
Q 002909 407 EGKPDLIIGNYSDGNLVASLMA-SKLGITQATIAHALEKSKYEDSD---AK-------WKELDPKYHFSCQFTADLIAMN 475 (867)
Q Consensus 407 ~~kPDIIh~h~~~~~l~a~lla-~~~gip~V~t~H~l~~~~~~~s~---~~-------~~~~~~~y~f~~~~~~e~ial~ 475 (867)
..++||+|+|.|..+..+..++ +..++|+|+|.|+....++...+ ++ +........+..+...|..+..
T Consensus 146 ~~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtHAT~~GR~l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~aa~ 225 (590)
T cd03793 146 DEPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTHATLLGRYLCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERAAAH 225 (590)
T ss_pred CCCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEecccccccccccCCcccchhhhhcchhhhhhcccchHHHHHHHHHHh
Confidence 4679999999999998888888 56889999999987766642211 22 1111222334445556888999
Q ss_pred cCCEEEecCHHHHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHh
Q 002909 476 QTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEEL 555 (867)
Q Consensus 476 ~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~ 555 (867)
.||.+||+|+.+....+..++ .+ +++ |||||+|.+.|.+..+.......-+..|.+.
T Consensus 226 ~Ad~fttVS~it~~E~~~Ll~-------------------~~--pd~--ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f 282 (590)
T cd03793 226 CAHVFTTVSEITAYEAEHLLK-------------------RK--PDV--VLPNGLNVKKFSALHEFQNLHAQSKEKINEF 282 (590)
T ss_pred hCCEEEECChHHHHHHHHHhC-------------------CC--CCE--EeCCCcchhhcccchhhhhhhHHhhhhhhHH
Confidence 999999999988765444322 22 334 9999999999987654322111111112111
Q ss_pred hhcccccccccccccCCCCcEEEE-EeccCC-cCChHHHHHHHHHhHc---c-CCC---eEEEEEeCCCCCCCCCChHHH
Q 002909 556 LYSKEDNSEHIGYLADRKKPIIFS-MARLDT-VKNITGLTEWYGKNKR---L-RNM---VNLVVVAGFFDPSKSHDREEI 626 (867)
Q Consensus 556 l~~~~~~~~~lGll~~~~k~iIl~-vGRL~~-~Kgid~LieA~~~l~~---~-~~~---v~LvIVG~g~~~~~~~d~ee~ 626 (867)
. ......++++ +++++++++ +||++. .||++.||+|++++.. . ..+ +-|+|+-++.....-..-..+
T Consensus 283 ~--~~~~~~~~~~--~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~ 358 (590)
T cd03793 283 V--RGHFYGHYDF--DLDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQ 358 (590)
T ss_pred H--HHHHhhhcCC--CCCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcch
Confidence 1 1112244565 667788777 799998 9999999999999864 1 222 334444443210000000001
Q ss_pred HHHHHH-------------------------------------------------------------------HHHHHHc
Q 002909 627 AEIKKM-------------------------------------------------------------------HTLIEKY 639 (867)
Q Consensus 627 ~~~~~l-------------------------------------------------------------------~~li~~~ 639 (867)
+..+.+ -..+++.
T Consensus 359 ~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~ 438 (590)
T cd03793 359 AVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRI 438 (590)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHh
Confidence 111111 1111222
Q ss_pred CC----CCc--EEEccccc---CCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCCc----ccee
Q 002909 640 QL----QGQ--FRWIAAQT---DRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP----AEII 706 (867)
Q Consensus 640 ~L----~~~--V~flG~~~---d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG~----~EiI 706 (867)
+| .++ |.|++... |.+-..+.+.++.. ||+||+||++|+||++++|||+||+|||+|+.+|+ .|++
T Consensus 439 ~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g-~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~E~v 517 (590)
T cd03793 439 QLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRG-CHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHI 517 (590)
T ss_pred cCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhh-ceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhHHHh
Confidence 22 122 34444221 12223345666665 99999999999999999999999999999999998 5666
Q ss_pred ecC-ceEEEeC-------CCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHH-HHHHHhCCHHHHHHHHHHHHh
Q 002909 707 IDG-VSGFHID-------PNNGDESSNKIADFFEKCKTDAGYWNQMSAAGR-QRIYECYTWKIYANKVLNMGS 770 (867)
Q Consensus 707 ~dg-~~G~lv~-------p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar-~~v~~~ysw~~~a~~ll~ly~ 770 (867)
.++ ..|+++. +.+.++++++|.+++ .. +.++.+.++++ ++..+.|+|+..++.|.+.|.
T Consensus 518 ~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~~~----~~-~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~ 585 (590)
T cd03793 518 EDPESYGIYIVDRRFKSPDESVQQLTQYMYEFC----QL-SRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQ 585 (590)
T ss_pred ccCCCceEEEecCCccchHHHHHHHHHHHHHHh----CC-cHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 554 3677776 334555666665554 44 45666666654 345589999999999999654
No 69
>PHA01633 putative glycosyl transferase group 1
Probab=99.95 E-value=1.3e-25 Score=247.89 Aligned_cols=224 Identities=13% Similarity=0.098 Sum_probs=166.7
Q ss_pred HHhcCCEEEecCHHHHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcch
Q 002909 473 AMNQTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDI 552 (867)
Q Consensus 473 al~~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i 552 (867)
.|.+.+.+|++|+..++.+.+ .|++ .+ + +|+||+|.+.|.|........+
T Consensus 89 ~m~~~~~vIavS~~t~~~L~~--------------------~G~~--~~-i-~I~~GVD~~~f~p~~~~~~~~r------ 138 (335)
T PHA01633 89 YLLQDVKFIPNSKFSAENLQE--------------------VGLQ--VD-L-PVFHGINFKIVENAEKLVPQLK------ 138 (335)
T ss_pred HHhcCCEEEeCCHHHHHHHHH--------------------hCCC--Cc-e-eeeCCCChhhcCccchhhHHHH------
Confidence 456677999999877663321 2443 22 3 4789999998887542111100
Q ss_pred HHhhhcccccccccccccCCCCcEEEEEeccCCcCChHHHHHHHHHhHccCCC----eEEEEEeCCCCCCCCCChHHHHH
Q 002909 553 EELLYSKEDNSEHIGYLADRKKPIIFSMARLDTVKNITGLTEWYGKNKRLRNM----VNLVVVAGFFDPSKSHDREEIAE 628 (867)
Q Consensus 553 ~~~l~~~~~~~~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~~----v~LvIVG~g~~~~~~~d~ee~~~ 628 (867)
+.++.. .++.++|+++||+.++||++.|++|+..+.+..++ ++++++|++
T Consensus 139 -----------~~~~~~-~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~~-------------- 192 (335)
T PHA01633 139 -----------QKLDKD-FPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISHK-------------- 192 (335)
T ss_pred -----------HHhCcC-CCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcHH--------------
Confidence 122221 14667899999999999999999999999876654 578887632
Q ss_pred HHHHHHHHHHcCCCCcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCCccceeec
Q 002909 629 IKKMHTLIEKYQLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIID 708 (867)
Q Consensus 629 ~~~l~~li~~~~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG~~EiI~d 708 (867)
..+++++.++|+|+|+.. .++.+++.++|+. +|+||+||.+|+||++++|||+||+|||+|+.||..|++.+
T Consensus 193 ------~~~~l~l~~~V~f~g~~G-~~~~~dl~~~y~~-aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~ 264 (335)
T PHA01633 193 ------QFTQLEVPANVHFVAEFG-HNSREYIFAFYGA-MDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSW 264 (335)
T ss_pred ------HHHHcCCCCcEEEEecCC-CCCHHHHHHHHHh-CCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCC
Confidence 124567889999996432 2456789999997 99999999999999999999999999999999999887431
Q ss_pred ------------------CceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 002909 709 ------------------GVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKVL 766 (867)
Q Consensus 709 ------------------g~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll 766 (867)
...||.+++.|+++++++|..+++. .|++. .+.++++++ +.|+|+.++++++
T Consensus 265 ~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~--~~~~~---~~~~~~~~a-~~f~~~~~~~~~~ 334 (335)
T PHA01633 265 QWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFEL--QDREE---RSMKLKELA-KKYDIRNLYTRFL 334 (335)
T ss_pred ccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhc--cChhh---hhHHHHHHH-HhcCHHHHHHHhh
Confidence 2358889999999999999988632 34433 366777666 8999999999886
No 70
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.95 E-value=1.8e-25 Score=250.49 Aligned_cols=342 Identities=14% Similarity=0.098 Sum_probs=232.5
Q ss_pred ceEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCCCCCCCCCCCCccccccC
Q 002909 281 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLIPNSKGTKCSQELEPIYD 360 (867)
Q Consensus 281 ~rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~~~~~g~~~~~~~e~i~~ 360 (867)
|||+|++. ..||.+.... +|++.|.++||+|+ ++|... +. .....+.
T Consensus 2 ~~i~i~~~-------------g~gG~~~~~~--------~la~~L~~~g~ev~----vv~~~~----~~-~~~~~~~--- 48 (357)
T PRK00726 2 KKILLAGG-------------GTGGHVFPAL--------ALAEELKKRGWEVL----YLGTAR----GM-EARLVPK--- 48 (357)
T ss_pred cEEEEEcC-------------cchHhhhHHH--------HHHHHHHhCCCEEE----EEECCC----ch-hhhcccc---
Confidence 89888862 1478888777 56668888999999 888732 10 0111111
Q ss_pred CCCeEEEEccCCCccccccccccccc-chhhHHHHHHHHHHHHHHHcCCCCeEEEECCCChHHHHHHHHHhcCCcEEEEE
Q 002909 361 TKHSHILRIPFKTEQAILPQWVSRFD-IYPYLGRFAQDATAKILDLMEGKPDLIIGNYSDGNLVASLMASKLGITQATIA 439 (867)
Q Consensus 361 ~~~v~I~rvp~~~~~~~l~~~isr~~-i~p~l~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~l~a~lla~~~gip~V~t~ 439 (867)
.++.+.+++.....+. ...++.. .+.++. ....+.+.+.+ .+|||||+|.+..++.+.++++..++|+|++.
T Consensus 49 -~g~~~~~~~~~~~~~~--~~~~~l~~~~~~~~-~~~~~~~~ik~---~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~ 121 (357)
T PRK00726 49 -AGIEFHFIPSGGLRRK--GSLANLKAPFKLLK-GVLQARKILKR---FKPDVVVGFGGYVSGPGGLAARLLGIPLVIHE 121 (357)
T ss_pred -CCCcEEEEeccCcCCC--ChHHHHHHHHHHHH-HHHHHHHHHHh---cCCCEEEECCCcchhHHHHHHHHcCCCEEEEc
Confidence 2667777775432110 0000000 111111 11122222322 48999999987777777777888999999876
Q ss_pred cCCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHHHHhhcCCCCCccccccccccccceeeeccCCCC
Q 002909 440 HALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVF 519 (867)
Q Consensus 440 H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~ 519 (867)
|..... ..+++.++.+|.+++++++... . ++
T Consensus 122 ~~~~~~----------------------~~~r~~~~~~d~ii~~~~~~~~---------------------~----~~-- 152 (357)
T PRK00726 122 QNAVPG----------------------LANKLLARFAKKVATAFPGAFP---------------------E----FF-- 152 (357)
T ss_pred CCCCcc----------------------HHHHHHHHHhchheECchhhhh---------------------c----cC--
Confidence 642110 0123466789999998864321 0 12
Q ss_pred CCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccccccccccCCCCcEEEEEeccCCcCChHHHH-HHHHH
Q 002909 520 DPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHIGYLADRKKPIIFSMARLDTVKNITGLT-EWYGK 598 (867)
Q Consensus 520 ~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~lGll~~~~k~iIl~vGRL~~~Kgid~Li-eA~~~ 598 (867)
..++.+|+||+|.+.+.+.... .++++ +++.++|+++|+....|++..++ +|+.+
T Consensus 153 ~~~i~vi~n~v~~~~~~~~~~~----------------------~~~~~--~~~~~~i~~~gg~~~~~~~~~~l~~a~~~ 208 (357)
T PRK00726 153 KPKAVVTGNPVREEILALAAPP----------------------ARLAG--REGKPTLLVVGGSQGARVLNEAVPEALAL 208 (357)
T ss_pred CCCEEEECCCCChHhhcccchh----------------------hhccC--CCCCeEEEEECCcHhHHHHHHHHHHHHHH
Confidence 6789999999998765442211 12343 45677889999988888876555 99988
Q ss_pred hHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCC
Q 002909 599 NKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYE 678 (867)
Q Consensus 599 l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E 678 (867)
+.+. + ..++++|++.. +.+.+..+ +++. |.|.|++ +++..++.. +|+++.++-
T Consensus 209 ~~~~-~-~~~~~~G~g~~-------------~~~~~~~~-~~~~--v~~~g~~------~~~~~~~~~-~d~~i~~~g-- 261 (357)
T PRK00726 209 LPEA-L-QVIHQTGKGDL-------------EEVRAAYA-AGIN--AEVVPFI------DDMAAAYAA-ADLVICRAG-- 261 (357)
T ss_pred hhhC-c-EEEEEcCCCcH-------------HHHHHHhh-cCCc--EEEeehH------hhHHHHHHh-CCEEEECCC--
Confidence 8653 3 56778888853 33444445 6663 9999975 356777776 999998762
Q ss_pred CCCHHHHHHHHcCCCEEecCCCC--------ccceeecCceEEEeCCCC--HHHHHHHHHHHHHHhhcCHHHHHHHHHHH
Q 002909 679 AFGLTVIEAMNCGLPTFATNQGG--------PAEIIIDGVSGFHIDPNN--GDESSNKIADFFEKCKTDAGYWNQMSAAG 748 (867)
Q Consensus 679 gfGltvlEAMa~GlPVIat~~gG--------~~EiI~dg~~G~lv~p~d--~e~lA~aI~~ll~~~~~dp~~~~~m~~~a 748 (867)
+.+++|||+||+|+|++..++ ..+.+.+.++|+++++.| +++++++|.+++ +|++.+++|++++
T Consensus 262 --~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~ 335 (357)
T PRK00726 262 --ASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELL----SDPERLEAMAEAA 335 (357)
T ss_pred --HHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHH----cCHHHHHHHHHHH
Confidence 689999999999999997753 235677788999999888 999999998888 8999999999999
Q ss_pred HHHHHHhCCHHHHHHHHHHHH
Q 002909 749 RQRIYECYTWKIYANKVLNMG 769 (867)
Q Consensus 749 r~~v~~~ysw~~~a~~ll~ly 769 (867)
++++ +.++-+.+++.++++.
T Consensus 336 ~~~~-~~~~~~~~~~~~~~~~ 355 (357)
T PRK00726 336 RALG-KPDAAERLADLIEELA 355 (357)
T ss_pred HhcC-CcCHHHHHHHHHHHHh
Confidence 9886 8899999998888753
No 71
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=99.94 E-value=5.3e-26 Score=263.60 Aligned_cols=322 Identities=14% Similarity=0.065 Sum_probs=218.5
Q ss_pred HHHHHHHHHcCCCCeEEEECCCChHHHHHHHHHh-cCCcEEEEEcCCcccccccchhhhhhcCccccchhhhhHHHHHHh
Q 002909 397 DATAKILDLMEGKPDLIIGNYSDGNLVASLMASK-LGITQATIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMN 475 (867)
Q Consensus 397 ~~~~~i~~~l~~kPDIIh~h~~~~~l~a~lla~~-~gip~V~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~ 475 (867)
.+...+.... ...|+|+.|.+...+++.++.++ .+.|+++..|..++..-. |..+.. ...-...+.
T Consensus 120 ~fa~~i~~~~-~~~d~iwihDyhl~llp~~lr~~~~~~~i~~f~HipfP~~e~-----~~~lp~-------~~~ll~~~l 186 (460)
T cd03788 120 KFADAIAEVL-RPGDLVWVHDYHLLLLPQMLRERGPDARIGFFLHIPFPSSEI-----FRCLPW-------REELLRGLL 186 (460)
T ss_pred HHHHHHHHhc-CCCCEEEEeChhhhHHHHHHHhhCCCCeEEEEEeCCCCChHH-----HhhCCC-------hHHHHHHHh
Confidence 3344444433 35699999998887777777654 468999999986643311 211110 001112567
Q ss_pred cCCEEEecCHHHHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHh
Q 002909 476 QTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEEL 555 (867)
Q Consensus 476 ~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~ 555 (867)
.+|.|...+......+.+........ ... ........|. ..++.++|||||.+.|.+......... .+
T Consensus 187 ~~D~igF~t~~~~~~Fl~~~~~~l~~-~~~-~~~~i~~~g~---~~~i~vip~GID~~~f~~~~~~~~~~~----~~--- 254 (460)
T cd03788 187 GADLIGFQTERYARNFLSCCSRLLGL-EVT-DDGGVEYGGR---RVRVGAFPIGIDPDAFRKLAASPEVQE----RA--- 254 (460)
T ss_pred cCCEEEECCHHHHHHHHHHHHHHcCC-ccc-CCceEEECCE---EEEEEEEeCeEcHHHHHHHhcCchhHH----HH---
Confidence 79999999976544222111000000 000 0000111121 346899999999988865422111000 00
Q ss_pred hhcccccccccccccCCCCcEEEEEeccCCcCChHHHHHHHHHhHccCCC----eEEEEEeCCCCCCCCCChHHHHHHHH
Q 002909 556 LYSKEDNSEHIGYLADRKKPIIFSMARLDTVKNITGLTEWYGKNKRLRNM----VNLVVVAGFFDPSKSHDREEIAEIKK 631 (867)
Q Consensus 556 l~~~~~~~~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~~----v~LvIVG~g~~~~~~~d~ee~~~~~~ 631 (867)
++..+. .+++++|+++||+++.||++.+++|+..+.+.+|+ ++|+++|++.. ...++...+.++
T Consensus 255 -------~~~~~~--~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~---g~~~~~~~l~~~ 322 (460)
T cd03788 255 -------AELRER--LGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSR---TDVPEYQELRRE 322 (460)
T ss_pred -------HHHHHh--cCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCC---cCcHHHHHHHHH
Confidence 011233 45788999999999999999999999998877665 67999987532 122334455666
Q ss_pred HHHHHHHcCCC------CcEEEc-ccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCC----EEecCCC
Q 002909 632 MHTLIEKYQLQ------GQFRWI-AAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLP----TFATNQG 700 (867)
Q Consensus 632 l~~li~~~~L~------~~V~fl-G~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlP----VIat~~g 700 (867)
+++++++.+.. ..|.++ | .++.+++..+|+. ||+||+||..||||++++|||+||+| ||+|+.+
T Consensus 323 l~~~v~~in~~~g~~~~~~v~~~~g----~v~~~el~~~y~~-aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~ 397 (460)
T cd03788 323 VEELVGRINGKFGTLDWTPVRYLYR----SLPREELAALYRA-ADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFA 397 (460)
T ss_pred HHHHHHHHHhccCCCCceeEEEEeC----CCCHHHHHHHHHh-ccEEEeCccccccCcccceeEEEecCCCceEEEeccc
Confidence 77776665421 235544 5 4567899999997 99999999999999999999999999 9999998
Q ss_pred CccceeecCceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 002909 701 GPAEIIIDGVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKVLN 767 (867)
Q Consensus 701 G~~EiI~dg~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll~ 767 (867)
|..+. +.+|++++|.|++++|++|.++++ ++++.++++++++++.+ ++|||+..+++++.
T Consensus 398 G~~~~---~~~g~lv~p~d~~~la~ai~~~l~---~~~~e~~~~~~~~~~~v-~~~~~~~w~~~~l~ 457 (460)
T cd03788 398 GAAEE---LSGALLVNPYDIDEVADAIHRALT---MPLEERRERHRKLREYV-RTHDVQAWANSFLD 457 (460)
T ss_pred cchhh---cCCCEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHH
Confidence 88877 468999999999999999999883 45688889999999988 78999999999876
No 72
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.94 E-value=1.9e-24 Score=240.75 Aligned_cols=322 Identities=16% Similarity=0.126 Sum_probs=221.3
Q ss_pred cccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCCCCCCCCCCCCccccccCCCCeEEEEccCCCccccccccc
Q 002909 303 TGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLIPNSKGTKCSQELEPIYDTKHSHILRIPFKTEQAILPQWV 382 (867)
Q Consensus 303 tGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~l~~~i 382 (867)
+||.+.++. .|++.|.++||+|+ |+|..... ..+. ....++++.++|+....+
T Consensus 9 ~gG~~~~~~--------~la~~l~~~G~ev~----v~~~~~~~--------~~~~-~~~~~~~~~~~~~~~~~~------ 61 (350)
T cd03785 9 TGGHIFPAL--------ALAEELRERGAEVL----FLGTKRGL--------EARL-VPKAGIPLHTIPVGGLRR------ 61 (350)
T ss_pred chhhhhHHH--------HHHHHHHhCCCEEE----EEECCCcc--------hhhc-ccccCCceEEEEecCcCC------
Confidence 689988888 56667888999999 88874210 1111 111357778887643211
Q ss_pred ccccchhhHH------HHHHHHHHHHHHHcCCCCeEEEECCCChHHHHHHHHHhcCCcEEEEEcCCcccccccchhhhhh
Q 002909 383 SRFDIYPYLG------RFAQDATAKILDLMEGKPDLIIGNYSDGNLVASLMASKLGITQATIAHALEKSKYEDSDAKWKE 456 (867)
Q Consensus 383 sr~~i~p~l~------~f~~~~~~~i~~~l~~kPDIIh~h~~~~~l~a~lla~~~gip~V~t~H~l~~~~~~~s~~~~~~ 456 (867)
...+..+. .....+.+.+.+ .+||+||+|....++.+.++++..++|+++..|+..+.
T Consensus 62 --~~~~~~~~~~~~~~~~~~~~~~~i~~---~~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~~~~~~~----------- 125 (350)
T cd03785 62 --KGSLKKLKAPFKLLKGVLQARKILKK---FKPDVVVGFGGYVSGPVGLAAKLLGIPLVIHEQNAVPG----------- 125 (350)
T ss_pred --CChHHHHHHHHHHHHHHHHHHHHHHh---cCCCEEEECCCCcchHHHHHHHHhCCCEEEEcCCCCcc-----------
Confidence 11111111 111122333333 48999999987667777788889999998765542110
Q ss_pred cCccccchhhhhHHHHHHhcCCEEEecCHHHHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCC
Q 002909 457 LDPKYHFSCQFTADLIAMNQTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYF 536 (867)
Q Consensus 457 ~~~~y~f~~~~~~e~ial~~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~ 536 (867)
..+++.+..+|.|++.|+...+. ++ ..++.+|+||+|.+.+.
T Consensus 126 -----------~~~~~~~~~~~~vi~~s~~~~~~-------------------------~~--~~~~~~i~n~v~~~~~~ 167 (350)
T cd03785 126 -----------LANRLLARFADRVALSFPETAKY-------------------------FP--KDKAVVTGNPVREEILA 167 (350)
T ss_pred -----------HHHHHHHHhhCEEEEcchhhhhc-------------------------CC--CCcEEEECCCCchHHhh
Confidence 01233566799999999866531 11 56899999999987665
Q ss_pred CCchHhhhhccCCcchHHhhhcccccccccccccCCCCcEEEEEeccCCcCChHH-HHHHHHHhHccCCCeEE-EEEeCC
Q 002909 537 PYTEKQKRLTSFHPDIEELLYSKEDNSEHIGYLADRKKPIIFSMARLDTVKNITG-LTEWYGKNKRLRNMVNL-VVVAGF 614 (867)
Q Consensus 537 p~~~~~~r~~~~~~~i~~~l~~~~~~~~~lGll~~~~k~iIl~vGRL~~~Kgid~-LieA~~~l~~~~~~v~L-vIVG~g 614 (867)
+... + +.+++ ++++++|+++|+....|+... +++++..+.+ +++++ +++|.+
T Consensus 168 ~~~~---~-------------------~~~~~--~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~--~~~~~~~i~G~g 221 (350)
T cd03785 168 LDRE---R-------------------ARLGL--RPGKPTLLVFGGSQGARAINEAVPEALAELLR--KRLQVIHQTGKG 221 (350)
T ss_pred hhhh---H-------------------HhcCC--CCCCeEEEEECCcHhHHHHHHHHHHHHHHhhc--cCeEEEEEcCCc
Confidence 4321 1 34555 667788888887777777654 5588888863 45664 466776
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCE
Q 002909 615 FDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPT 694 (867)
Q Consensus 615 ~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPV 694 (867)
. .+++++.++++ .++|.|.|++ .++..+|+. ||++|.++. +++++|||+||+||
T Consensus 222 -~------------~~~l~~~~~~~--~~~v~~~g~~------~~~~~~l~~-ad~~v~~sg----~~t~~Eam~~G~Pv 275 (350)
T cd03785 222 -D------------LEEVKKAYEEL--GVNYEVFPFI------DDMAAAYAA-ADLVISRAG----ASTVAELAALGLPA 275 (350)
T ss_pred -c------------HHHHHHHHhcc--CCCeEEeehh------hhHHHHHHh-cCEEEECCC----HhHHHHHHHhCCCE
Confidence 3 35566667665 4789999964 356777776 999998762 68999999999999
Q ss_pred EecCCCC--------ccceeecCceEEEeCCC--CHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHH
Q 002909 695 FATNQGG--------PAEIIIDGVSGFHIDPN--NGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYA 762 (867)
Q Consensus 695 Iat~~gG--------~~EiI~dg~~G~lv~p~--d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a 762 (867)
|+++.++ ..+.+.++++|++++++ |+++++++|.+++ +|++.+++|++++++++ +.+.-++++
T Consensus 276 v~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~-~~~~~~~i~ 348 (350)
T cd03785 276 ILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELL----SDPERLKAMAEAARSLA-RPDAAERIA 348 (350)
T ss_pred EEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHhcC-CCCHHHHHH
Confidence 9987654 24667777899999987 8999999999888 89999999999999877 466655544
No 73
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.93 E-value=2.2e-24 Score=240.10 Aligned_cols=314 Identities=16% Similarity=0.131 Sum_probs=205.7
Q ss_pred HHHHHHHHCCCceeeccEEEecCCCCCCCCCCCCccccccCCCCeEEEEccCCCcccccccccccccchhhH---HHHHH
Q 002909 320 ELLLRIKQQGLSVKPQILVVTRLIPNSKGTKCSQELEPIYDTKHSHILRIPFKTEQAILPQWVSRFDIYPYL---GRFAQ 396 (867)
Q Consensus 320 eLa~~L~~~GheV~~~V~VvT~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~l~~~isr~~i~p~l---~~f~~ 396 (867)
.|+++|.++||+|+ ++|+.. +. .... ....++.+.+++.....+ .......+.. .....
T Consensus 19 ~La~~L~~~g~eV~----vv~~~~----~~--~~~~---~~~~g~~~~~i~~~~~~~-----~~~~~~l~~~~~~~~~~~ 80 (348)
T TIGR01133 19 AVAEELIKRGVEVL----WLGTKR----GL--EKRL---VPKAGIEFYFIPVGGLRR-----KGSFRLIKTPLKLLKAVF 80 (348)
T ss_pred HHHHHHHhCCCEEE----EEeCCC----cc--hhcc---cccCCCceEEEeccCcCC-----CChHHHHHHHHHHHHHHH
Confidence 56778888999999 888621 11 0011 111356777777643211 0001111111 11222
Q ss_pred HHHHHHHHHcCCCCeEEEECCCChHHHHHHHHHhcCCcEEEEEcCCcccccccchhhhhhcCccccchhhhhHHHHHHhc
Q 002909 397 DATAKILDLMEGKPDLIIGNYSDGNLVASLMASKLGITQATIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQ 476 (867)
Q Consensus 397 ~~~~~i~~~l~~kPDIIh~h~~~~~l~a~lla~~~gip~V~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~ 476 (867)
.+.+.+.+ .+||+||+|....++.+.++++..++|+|+..|.... . ..+++..+.
T Consensus 81 ~l~~~i~~---~~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~-----------------~-----~~~~~~~~~ 135 (348)
T TIGR01133 81 QARRILKK---FKPDAVIGFGGYVSGPAGLAAKLLGIPLFHHEQNAVP-----------------G-----LTNKLLSRF 135 (348)
T ss_pred HHHHHHHh---cCCCEEEEcCCcccHHHHHHHHHcCCCEEEECCCCCc-----------------c-----HHHHHHHHH
Confidence 33333333 4899999998776677777788889999754332110 0 012335678
Q ss_pred CCEEEecCHHHHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhh
Q 002909 477 TDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELL 556 (867)
Q Consensus 477 aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l 556 (867)
+|.+++.|+.+.+. -+..+|+||+|...+.+....
T Consensus 136 ~d~ii~~~~~~~~~------------------------------~~~~~i~n~v~~~~~~~~~~~--------------- 170 (348)
T TIGR01133 136 AKKVLISFPGAKDH------------------------------FEAVLVGNPVRQEIRSLPVPR--------------- 170 (348)
T ss_pred hCeeEECchhHhhc------------------------------CCceEEcCCcCHHHhcccchh---------------
Confidence 99999999865430 123689999997655432110
Q ss_pred hcccccccccccccCCCCcEEEEEeccCCcCChHH-HHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHH
Q 002909 557 YSKEDNSEHIGYLADRKKPIIFSMARLDTVKNITG-LTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTL 635 (867)
Q Consensus 557 ~~~~~~~~~lGll~~~~k~iIl~vGRL~~~Kgid~-LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~l 635 (867)
..+|+ ++++++|+++|+....|++.. +++++..+.+. ++++++++++.+ .+.+++.
T Consensus 171 -------~~~~~--~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~~~~~~~g~~~------------~~~l~~~ 227 (348)
T TIGR01133 171 -------ERFGL--REGKPTILVLGGSQGAKILNELVPKALAKLAEK--GIQIVHQTGKND------------LEKVKNV 227 (348)
T ss_pred -------hhcCC--CCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--CcEEEEECCcch------------HHHHHHH
Confidence 22455 567788999998888888655 55888887652 466655554422 3567777
Q ss_pred HHHcCCCCcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCC-------ccceeec
Q 002909 636 IEKYQLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG-------PAEIIID 708 (867)
Q Consensus 636 i~~~~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG-------~~EiI~d 708 (867)
++++++.+.+.|.. . ++..+|+. ||++|.++ + |++++|||+||+|+|+++.+| ..+++.+
T Consensus 228 ~~~~~l~~~v~~~~-------~-~~~~~l~~-ad~~v~~~---g-~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~ 294 (348)
T TIGR01133 228 YQELGIEAIVTFID-------E-NMAAAYAA-ADLVISRA---G-ASTVAELAAAGVPAILIPYPYAADDQYYNAKFLED 294 (348)
T ss_pred HhhCCceEEecCcc-------c-CHHHHHHh-CCEEEECC---C-hhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHH
Confidence 88887755555652 1 45667776 99999875 2 789999999999999998754 2357888
Q ss_pred CceEEEeCCCC--HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHH
Q 002909 709 GVSGFHIDPNN--GDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYA 762 (867)
Q Consensus 709 g~~G~lv~p~d--~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a 762 (867)
+++|++++++| +++++++|.+++ +|++.+++|++++++++ +.+.-++++
T Consensus 295 ~~~G~~~~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~-~~~~~~~i~ 345 (348)
T TIGR01133 295 LGAGLVIRQKELLPEKLLEALLKLL----LDPANLEAMAEAARKLA-KPDAAKRIA 345 (348)
T ss_pred CCCEEEEecccCCHHHHHHHHHHHH----cCHHHHHHHHHHHHhcC-CccHHHHHH
Confidence 99999999886 999999998888 89999999999998776 444444443
No 74
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=99.92 E-value=3.8e-24 Score=246.89 Aligned_cols=319 Identities=15% Similarity=0.122 Sum_probs=217.2
Q ss_pred HHHHHHHHHcCCCCeEEEECCCChHHHHHHHHHhc-CCcEEEEEcCCcccccccchhhhhhcCccccchhhhhHHHHHHh
Q 002909 397 DATAKILDLMEGKPDLIIGNYSDGNLVASLMASKL-GITQATIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMN 475 (867)
Q Consensus 397 ~~~~~i~~~l~~kPDIIh~h~~~~~l~a~lla~~~-gip~V~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~ 475 (867)
.+...+.+.. ..-|+|..|.....+++.++.++. ..++.+..|..++..-.+..+.|. ..=+..|-
T Consensus 116 ~fA~~i~~~~-~~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlHipfP~~e~f~~lp~r------------~~il~gll 182 (456)
T TIGR02400 116 LFAEALAPLL-QPGDIVWVHDYHLMLLPAMLRELGVQNKIGFFLHIPFPSSEIYRTLPWR------------RELLEGLL 182 (456)
T ss_pred HHHHHHHHhC-CCCCEEEEecchhhHHHHHHHhhCCCCeEEEEEeCCCCChHHHhhCCcH------------HHHHHHHh
Confidence 3444444443 345899999988888888887764 457788999755543221111111 11123788
Q ss_pred cCCEEEecCHHHHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchHh---hhhccCCcch
Q 002909 476 QTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKQ---KRLTSFHPDI 552 (867)
Q Consensus 476 ~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~---~r~~~~~~~i 552 (867)
.||.|...|+..++.+.......... -..++- ....| . ..++.++|||||++.|.+..... .+...
T Consensus 183 ~~dligF~t~~~~~~Fl~~~~~~l~~--~~~~~~-~~~~g-~--~~~v~viP~GID~~~f~~~~~~~~~~~~~~~----- 251 (456)
T TIGR02400 183 AYDLVGFQTYDDARNFLSAVSRELGL--ETLPNG-VESGG-R--TVRVGAFPIGIDVDRFAEQAKKPSVQKRIAE----- 251 (456)
T ss_pred cCCEEEECCHHHHHHHHHHHHHHhCC--cccCCc-eEECC-c--EEEEEEecCcCCHHHHHHHhcChhHHHHHHH-----
Confidence 99999999998876543322110000 000000 00111 1 34789999999999886643211 11000
Q ss_pred HHhhhcccccccccccccCCCCcEEEEEeccCCcCChHHHHHHHHHhHccCCC----eEEEEEeCCCCCCCCCChHHHHH
Q 002909 553 EELLYSKEDNSEHIGYLADRKKPIIFSMARLDTVKNITGLTEWYGKNKRLRNM----VNLVVVAGFFDPSKSHDREEIAE 628 (867)
Q Consensus 553 ~~~l~~~~~~~~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~~----v~LvIVG~g~~~~~~~d~ee~~~ 628 (867)
.++.+ +++++|+++||+++.||++.+++|+.++.+.+|+ +.|+++|+... ....+....
T Consensus 252 ---------lr~~~-----~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~r---g~~~~~~~l 314 (456)
T TIGR02400 252 ---------LRESL-----KGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSR---GDVPEYQQL 314 (456)
T ss_pred ---------HHHHc-----CCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCc---cCchHHHHH
Confidence 00111 3678999999999999999999999998776665 56888875321 112223333
Q ss_pred HHHHHHHHHHcCC-CCc-----EEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCC----EEecC
Q 002909 629 IKKMHTLIEKYQL-QGQ-----FRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLP----TFATN 698 (867)
Q Consensus 629 ~~~l~~li~~~~L-~~~-----V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlP----VIat~ 698 (867)
.+.+++++.+.+. .+. |.+++. .++.+++..+|+. ||+||+||..||||++++||||||+| +|+|+
T Consensus 315 ~~~i~~lv~~in~~~~~~~~~pv~~l~~---~~~~~el~aly~a-aDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~ 390 (456)
T TIGR02400 315 RRQVEELVGRINGRFGTLDWTPIRYLNR---SYDREELMALYRA-ADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSE 390 (456)
T ss_pred HHHHHHHHHHHHhccCCCCCccEEEEcC---CCCHHHHHHHHHh-CcEEEECccccccCccHHHHHHhcCCCCceEEEeC
Confidence 4444444433221 111 444442 4567899999997 99999999999999999999999999 99999
Q ss_pred CCCccceeecCceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 002909 699 QGGPAEIIIDGVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKVLN 767 (867)
Q Consensus 699 ~gG~~EiI~dg~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll~ 767 (867)
.+|..+.+. +|++++|.|++++|++|.++++ .+++.+++..+++++++ .+||+...++++++
T Consensus 391 ~~G~~~~l~---~gllVnP~d~~~lA~aI~~aL~---~~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~ 452 (456)
T TIGR02400 391 FAGAAQELN---GALLVNPYDIDGMADAIARALT---MPLEEREERHRAMMDKL-RKNDVQRWREDFLS 452 (456)
T ss_pred CCCChHHhC---CcEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-hhCCHHHHHHHHHH
Confidence 999888873 7999999999999999999884 57888999999999998 66999999999886
No 75
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.92 E-value=5.9e-23 Score=236.06 Aligned_cols=283 Identities=13% Similarity=0.114 Sum_probs=191.2
Q ss_pred CCCeEEEECCCChHHHHHHHHHhcCCcEEEEEcCCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHHH
Q 002909 408 GKPDLIIGNYSDGNLVASLMASKLGITQATIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQE 487 (867)
Q Consensus 408 ~kPDIIh~h~~~~~l~a~lla~~~gip~V~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~~ 487 (867)
.+||+||++..+........+++.|+|++++-|.+....+ ..|..+ . ...+..++.+|.|++.|+..
T Consensus 123 ~~Pd~v~~~~~~~~~~~l~~~~~~~ip~vl~~~~~~~~s~----~~~~~~-------~--~~~r~~~~~~d~ii~~S~~~ 189 (425)
T PRK05749 123 WRPKLVIIMETELWPNLIAELKRRGIPLVLANARLSERSF----KRYQKF-------K--RFYRLLFKNIDLVLAQSEED 189 (425)
T ss_pred hCCCEEEEEecchhHHHHHHHHHCCCCEEEEeccCChhhH----HHHHHH-------H--HHHHHHHHhCCEEEECCHHH
Confidence 3899999885443222333467889999887654322111 111111 1 11234678999999999987
Q ss_pred HhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccccccc
Q 002909 488 IAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHIG 567 (867)
Q Consensus 488 ~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~lG 567 (867)
.+.+.+ .|++ .+ +.+++|+ +.+.+.+....... . ..++.++
T Consensus 190 ~~~l~~--------------------~g~~--~~-i~vi~n~-~~d~~~~~~~~~~~-~--------------~~r~~~~ 230 (425)
T PRK05749 190 AERFLA--------------------LGAK--NE-VTVTGNL-KFDIEVPPELAARA-A--------------TLRRQLA 230 (425)
T ss_pred HHHHHH--------------------cCCC--CC-cEecccc-cccCCCChhhHHHH-H--------------HHHHHhc
Confidence 763221 2443 44 7788884 33332221111100 0 0012232
Q ss_pred cccCCCCcEEEEEeccCCcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEE
Q 002909 568 YLADRKKPIIFSMARLDTVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRW 647 (867)
Q Consensus 568 ll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~f 647 (867)
+++++++++|+. .|+.+.+++|+.++.+..++++|+|+|+|+. ..++++++++++++. .+.|
T Consensus 231 ----~~~~vil~~~~~--~~~~~~ll~A~~~l~~~~~~~~liivG~g~~-----------r~~~l~~~~~~~gl~-~~~~ 292 (425)
T PRK05749 231 ----PNRPVWIAASTH--EGEEELVLDAHRALLKQFPNLLLILVPRHPE-----------RFKEVEELLKKAGLS-YVRR 292 (425)
T ss_pred ----CCCcEEEEeCCC--chHHHHHHHHHHHHHHhCCCcEEEEcCCChh-----------hHHHHHHHHHhCCCc-EEEc
Confidence 356788888864 6889999999999887789999999999864 125688888888885 3555
Q ss_pred cccccCC--------CChHHHHHHHHccCcEE-EEcCCCCCCCHHHHHHHHcCCCEEecCC-CCccceeecC-ceEEEeC
Q 002909 648 IAAQTDR--------YRNGELYRCIADTKGAF-VQPALYEAFGLTVIEAMNCGLPTFATNQ-GGPAEIIIDG-VSGFHID 716 (867)
Q Consensus 648 lG~~~d~--------v~~~el~~~la~~aDvf-V~PS~~EgfGltvlEAMa~GlPVIat~~-gG~~EiI~dg-~~G~lv~ 716 (867)
.|..... -..+++..+|+. ||++ +.+|..|++|.+++|||+||+|||+++. ++..|++... .+|+++.
T Consensus 293 ~~~~~~~~~~~v~l~~~~~el~~~y~~-aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~g~~~~ 371 (425)
T PRK05749 293 SQGEPPSADTDVLLGDTMGELGLLYAI-ADIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQAGAAIQ 371 (425)
T ss_pred cCCCCCCCCCcEEEEecHHHHHHHHHh-CCEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHCCCeEE
Confidence 5421100 024689999987 9995 5578889999999999999999999865 6666766542 4688888
Q ss_pred CCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 002909 717 PNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKVLNM 768 (867)
Q Consensus 717 p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll~l 768 (867)
++|+++++++|..++ +|++.+++|+++|++.+.++. ..+++++++
T Consensus 372 ~~d~~~La~~l~~ll----~~~~~~~~m~~~a~~~~~~~~---~~~~~~~~~ 416 (425)
T PRK05749 372 VEDAEDLAKAVTYLL----TDPDARQAYGEAGVAFLKQNQ---GALQRTLQL 416 (425)
T ss_pred ECCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHhCc---cHHHHHHHH
Confidence 999999999999988 899999999999999996652 455555554
No 76
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.91 E-value=5.2e-23 Score=232.90 Aligned_cols=261 Identities=15% Similarity=0.117 Sum_probs=179.1
Q ss_pred CCCeEEEECCCChHHHHHHHHHhcCCcEEEEEcCCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHHH
Q 002909 408 GKPDLIIGNYSDGNLVASLMASKLGITQATIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQE 487 (867)
Q Consensus 408 ~kPDIIh~h~~~~~l~a~lla~~~gip~V~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~~ 487 (867)
.+||+||++++..++.....+...++|++++.++..... .| ..+.+|.++++|+..
T Consensus 103 ~~pD~Vi~~~~~~~~~~~~~~~~~~ip~~~~~td~~~~~------~~------------------~~~~ad~i~~~s~~~ 158 (380)
T PRK13609 103 EKPDIVINTFPIIAVPELKKQTGISIPTYNVLTDFCLHK------IW------------------VHREVDRYFVATDHV 158 (380)
T ss_pred hCcCEEEEcChHHHHHHHHHhcCCCCCeEEEeCCCCCCc------cc------------------ccCCCCEEEECCHHH
Confidence 489999998776654444444456799886665432111 11 356899999999876
Q ss_pred HhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccccccc
Q 002909 488 IAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHIG 567 (867)
Q Consensus 488 ~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~lG 567 (867)
.+.+.+ .|++ .+++.++.+.++.....+...... ++++|
T Consensus 159 ~~~l~~--------------------~gi~--~~ki~v~G~p~~~~f~~~~~~~~~-------------------~~~~~ 197 (380)
T PRK13609 159 KKVLVD--------------------IGVP--PEQVVETGIPIRSSFELKINPDII-------------------YNKYQ 197 (380)
T ss_pred HHHHHH--------------------cCCC--hhHEEEECcccChHHcCcCCHHHH-------------------HHHcC
Confidence 552211 2444 678888766554322111111111 14566
Q ss_pred cccCCCCc-EEEEEeccCCcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEE
Q 002909 568 YLADRKKP-IIFSMARLDTVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFR 646 (867)
Q Consensus 568 ll~~~~k~-iIl~vGRL~~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~ 646 (867)
+ +++++ ++++.|++...||+..+++++.. .++++++++|++.. ...+++++++++++ ++|+
T Consensus 198 l--~~~~~~il~~~G~~~~~k~~~~li~~l~~----~~~~~~viv~G~~~----------~~~~~l~~~~~~~~--~~v~ 259 (380)
T PRK13609 198 L--CPNKKILLIMAGAHGVLGNVKELCQSLMS----VPDLQVVVVCGKNE----------ALKQSLEDLQETNP--DALK 259 (380)
T ss_pred C--CCCCcEEEEEcCCCCCCcCHHHHHHHHhh----CCCcEEEEEeCCCH----------HHHHHHHHHHhcCC--CcEE
Confidence 6 55555 45566889889999999998753 26799988876432 23456777766654 6899
Q ss_pred EcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecC-CCCc----cceeecCceEEEeCCCCHH
Q 002909 647 WIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATN-QGGP----AEIIIDGVSGFHIDPNNGD 721 (867)
Q Consensus 647 flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~-~gG~----~EiI~dg~~G~lv~p~d~e 721 (867)
|+|++. ++..+++. ||++|. ++.|++++|||+||+|||+++ .+|. .+.+.+ +|+.+...|++
T Consensus 260 ~~g~~~------~~~~l~~~-aD~~v~----~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~--~G~~~~~~~~~ 326 (380)
T PRK13609 260 VFGYVE------NIDELFRV-TSCMIT----KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFER--KGAAVVIRDDE 326 (380)
T ss_pred EEechh------hHHHHHHh-ccEEEe----CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHh--CCcEEEECCHH
Confidence 999754 35667775 999985 466999999999999999986 5553 123332 34444557999
Q ss_pred HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 002909 722 ESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKVLNMG 769 (867)
Q Consensus 722 ~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll~ly 769 (867)
+++++|.+++ +|++.+++|++++++.. +.++++.+++.+++++
T Consensus 327 ~l~~~i~~ll----~~~~~~~~m~~~~~~~~-~~~s~~~i~~~i~~~~ 369 (380)
T PRK13609 327 EVFAKTEALL----QDDMKLLQMKEAMKSLY-LPEPADHIVDDILAEN 369 (380)
T ss_pred HHHHHHHHHH----CCHHHHHHHHHHHHHhC-CCchHHHHHHHHHHhh
Confidence 9999998888 89999999999998765 6789999999998853
No 77
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.89 E-value=7.2e-23 Score=204.95 Aligned_cols=160 Identities=35% Similarity=0.527 Sum_probs=143.3
Q ss_pred CCCCcEEEEEeccCCcCChHHHHHHHHHhHcc-CCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcc
Q 002909 571 DRKKPIIFSMARLDTVKNITGLTEWYGKNKRL-RNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIA 649 (867)
Q Consensus 571 ~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~~-~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG 649 (867)
..++++|+++||+.+.||++.+++++..+.+. .+++.++|+|.+.. ...+...++.+++.++|+|+|
T Consensus 12 ~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~i~~~~ 79 (172)
T PF00534_consen 12 PDKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGEY------------KKELKNLIEKLNLKENIIFLG 79 (172)
T ss_dssp -TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCCH------------HHHHHHHHHHTTCGTTEEEEE
T ss_pred CCCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEccccc------------ccccccccccccccccccccc
Confidence 67889999999999999999999999999764 78999999996543 567888999999999999999
Q ss_pred cccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCCccceeecCceEEEeCCCCHHHHHHHHHH
Q 002909 650 AQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDPNNGDESSNKIAD 729 (867)
Q Consensus 650 ~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~p~d~e~lA~aI~~ 729 (867)
. .+.+++..++.. +|++|+||..|+||++++|||+||+|||+++.|+..|++.++.+|+++++.|+++++++|..
T Consensus 80 ~----~~~~~l~~~~~~-~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~~~~~~~~l~~~i~~ 154 (172)
T PF00534_consen 80 Y----VPDDELDELYKS-SDIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLFDPNDIEELADAIEK 154 (172)
T ss_dssp S----HSHHHHHHHHHH-TSEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEESTTSHHHHHHHHHH
T ss_pred c----cccccccccccc-ceeccccccccccccccccccccccceeeccccCCceeeccccceEEeCCCCHHHHHHHHHH
Confidence 5 345688888887 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCHHHHHHHHHHHHHH
Q 002909 730 FFEKCKTDAGYWNQMSAAGRQR 751 (867)
Q Consensus 730 ll~~~~~dp~~~~~m~~~ar~~ 751 (867)
++ .|++.++.|++++++|
T Consensus 155 ~l----~~~~~~~~l~~~~~~~ 172 (172)
T PF00534_consen 155 LL----NDPELRQKLGKNARER 172 (172)
T ss_dssp HH----HHHHHHHHHHHHHHHH
T ss_pred HH----CCHHHHHHHHHHhcCC
Confidence 98 8899999999999875
No 78
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.89 E-value=3.3e-22 Score=244.15 Aligned_cols=323 Identities=14% Similarity=0.084 Sum_probs=217.8
Q ss_pred HHHHHHHHHHcCCCCeEEEECCCChHHHHHHHHHh-cCCcEEEEEcCCcccccccchhhhhhcCccccchhhhhHHHHHH
Q 002909 396 QDATAKILDLMEGKPDLIIGNYSDGNLVASLMASK-LGITQATIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAM 474 (867)
Q Consensus 396 ~~~~~~i~~~l~~kPDIIh~h~~~~~l~a~lla~~-~gip~V~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial 474 (867)
..+...+.+.. ..-|+|-.|.+...+++..+.++ ...++.+..|..++..-.+..+.|. ..-+..|
T Consensus 135 ~~FA~~i~~~~-~~~d~vWvhDYhL~llp~~lR~~~~~~~igfFlHiPFPs~e~fr~lp~r------------~~il~gl 201 (797)
T PLN03063 135 RMFLDVVKENY-EEGDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTPFPSSEIYKTLPSR------------SELLRAV 201 (797)
T ss_pred HHHHHHHHHhc-CCCCEEEEecchhhhHHHHHHHhCCCCcEEEEecCCCCCHHHHhhCCCH------------HHHHHHH
Confidence 33444444443 23489999998888888888765 5678889999876654322222221 1112378
Q ss_pred hcCCEEEecCHHHHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchHh---hhhccCCcc
Q 002909 475 NQTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKQ---KRLTSFHPD 551 (867)
Q Consensus 475 ~~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~---~r~~~~~~~ 551 (867)
-.||.|-+.|+..+..+-+........ ..+..++ ...|- ..++.++|||||.+.|.+..... .+...
T Consensus 202 l~aDligF~t~~y~r~Fl~~~~r~l~~-~~~~~~i--~~~gr---~~~I~viP~GID~~~f~~~~~~~~~~~~~~~---- 271 (797)
T PLN03063 202 LTADLIGFHTYDFARHFLSACTRILGV-EGTHEGV--VDQGK---VTRVAVFPIGIDPERFINTCELPEVKQHMKE---- 271 (797)
T ss_pred hcCCEEEeCCHHHHHHHHHHHHHHhCc-cccCCce--EECCe---EEEEEEEecccCHHHHHHHhcChhHHHHHHH----
Confidence 899999999987765433211110000 0000000 01121 34788999999998776532211 11000
Q ss_pred hHHhhhcccccccccccccCCCCcEEEEEeccCCcCChHHHHHHHHHhHccCCCe----EEEEEeCCCCCCCCCChHHHH
Q 002909 552 IEELLYSKEDNSEHIGYLADRKKPIIFSMARLDTVKNITGLTEWYGKNKRLRNMV----NLVVVAGFFDPSKSHDREEIA 627 (867)
Q Consensus 552 i~~~l~~~~~~~~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~~v----~LvIVG~g~~~~~~~d~ee~~ 627 (867)
.... ..++++|+++||+++.||++.+++||.++.+.+|++ .|+.+++... ...++
T Consensus 272 -------------lr~~--~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr---~~~~~--- 330 (797)
T PLN03063 272 -------------LKRF--FAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTR---NDVPE--- 330 (797)
T ss_pred -------------HHHh--cCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEecCCC---CchHH---
Confidence 0011 236789999999999999999999999998777765 3555553211 11122
Q ss_pred HHHHHHHHHHHcC--CC---CcEEEcc--cccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCC----EEe
Q 002909 628 EIKKMHTLIEKYQ--LQ---GQFRWIA--AQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLP----TFA 696 (867)
Q Consensus 628 ~~~~l~~li~~~~--L~---~~V~flG--~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlP----VIa 696 (867)
++++++.++++. +. +.+.|.+ +....++.+++..+|+. ||+||+||..||||++++||||||+| +|+
T Consensus 331 -y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~-ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVl 408 (797)
T PLN03063 331 -YQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAI-TDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVL 408 (797)
T ss_pred -HHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHh-CCEEEeCccccccCcchhhHheeecCCCCCEEe
Confidence 334444444442 22 2233333 11124678899999997 99999999999999999999999999 999
Q ss_pred cCCCCccceeecCceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Q 002909 697 TNQGGPAEIIIDGVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKVLNMGS 770 (867)
Q Consensus 697 t~~gG~~EiI~dg~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll~ly~ 770 (867)
|..+|..+.+ +.+|++++|.|++++|++|.++++ .+++.+++..++.++++ .++||...++.+++-+.
T Consensus 409 Se~~G~~~~l--~~~allVnP~D~~~lA~AI~~aL~---m~~~er~~r~~~~~~~v-~~~~~~~Wa~~fl~~l~ 476 (797)
T PLN03063 409 SEFAGAGQSL--GAGALLVNPWNITEVSSAIKEALN---MSDEERETRHRHNFQYV-KTHSAQKWADDFMSELN 476 (797)
T ss_pred eCCcCchhhh--cCCeEEECCCCHHHHHHHHHHHHh---CCHHHHHHHHHHHHHhh-hhCCHHHHHHHHHHHHH
Confidence 9999999986 567999999999999999999984 58888999889999988 88999999999888543
No 79
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.88 E-value=1.8e-20 Score=212.06 Aligned_cols=265 Identities=12% Similarity=0.039 Sum_probs=176.3
Q ss_pred cCCCCeEEEECCCChHHHHHHHHHhcCCcEEEEEcCCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCH
Q 002909 406 MEGKPDLIIGNYSDGNLVASLMASKLGITQATIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTY 485 (867)
Q Consensus 406 l~~kPDIIh~h~~~~~l~a~lla~~~gip~V~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~ 485 (867)
++.+.+|++.+.+....++ +...+.++|+.+++.......... + ....+...+++||.|+++|+
T Consensus 99 ~~~~~~i~~~~~P~~~~~~---~~~~~~~~Vyd~~D~~~~~~~~~~--~-----------~~~~e~~~~~~ad~vi~~S~ 162 (373)
T cd04950 99 LGFGRPILWYYTPYTLPVA---ALLQASLVVYDCVDDLSAFPGGPP--E-----------LLEAERRLLKRADLVFTTSP 162 (373)
T ss_pred cCCCCcEEEEeCccHHHHH---hhcCCCeEEEEcccchhccCCCCH--H-----------HHHHHHHHHHhCCEEEECCH
Confidence 3566677777655543333 336778899888875432211110 0 01345668899999999998
Q ss_pred HHHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccccc
Q 002909 486 QEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEH 565 (867)
Q Consensus 486 ~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~ 565 (867)
...+..+.. ..++.+|+||+|.+.|.+........ +.
T Consensus 163 ~l~~~~~~~-------------------------~~~i~~i~ngvd~~~f~~~~~~~~~~------------------~~ 199 (373)
T cd04950 163 SLYEAKRRL-------------------------NPNVVLVPNGVDYEHFAAARDPPPPP------------------AD 199 (373)
T ss_pred HHHHHHhhC-------------------------CCCEEEcccccCHHHhhcccccCCCh------------------hH
Confidence 766522211 35799999999998886643221100 00
Q ss_pred cccccCCCCcEEEEEeccCCcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcE
Q 002909 566 IGYLADRKKPIIFSMARLDTVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQF 645 (867)
Q Consensus 566 lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V 645 (867)
....++++|+|+|++.+.++++.+.++.. ..++++|+|+|++... .... .+...+||
T Consensus 200 ---~~~~~~~~i~y~G~l~~~~d~~ll~~la~----~~p~~~~vliG~~~~~------------~~~~----~~~~~~nV 256 (373)
T cd04950 200 ---LAALPRPVIGYYGAIAEWLDLELLEALAK----ARPDWSFVLIGPVDVS------------IDPS----ALLRLPNV 256 (373)
T ss_pred ---HhcCCCCEEEEEeccccccCHHHHHHHHH----HCCCCEEEEECCCcCc------------cChh----HhccCCCE
Confidence 01346789999999999888776655443 3578999999998320 0011 11124789
Q ss_pred EEcccccCCCChHHHHHHHHccCcEEEEcCCC-----CCCCHHHHHHHHcCCCEEecCCCCccceeecCceEEEeCCCCH
Q 002909 646 RWIAAQTDRYRNGELYRCIADTKGAFVQPALY-----EAFGLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDPNNG 720 (867)
Q Consensus 646 ~flG~~~d~v~~~el~~~la~~aDvfV~PS~~-----EgfGltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~p~d~ 720 (867)
+|+|+ ++.+++..+++. +|++++|+.. +++|++++||||||+|||+|+.++..+ .+..+++ .++|+
T Consensus 257 ~~~G~----~~~~~l~~~l~~-~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~~~~---~~~~~~~-~~~d~ 327 (373)
T cd04950 257 HYLGP----KPYKELPAYLAG-FDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPEVRR---YEDEVVL-IADDP 327 (373)
T ss_pred EEeCC----CCHHHHHHHHHh-CCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHHHHh---hcCcEEE-eCCCH
Confidence 99994 556899999997 9999999863 468999999999999999998755443 3433444 46799
Q ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 002909 721 DESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKVLNM 768 (867)
Q Consensus 721 e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll~l 768 (867)
++++++|.+++. .+.....+ ++++ +.+.|||+..++++++.
T Consensus 328 ~~~~~ai~~~l~---~~~~~~~~---~~~~-~~~~~sW~~~a~~~~~~ 368 (373)
T cd04950 328 EEFVAAIEKALL---EDGPARER---RRLR-LAAQNSWDARAAEMLEA 368 (373)
T ss_pred HHHHHHHHHHHh---cCCchHHH---HHHH-HHHHCCHHHHHHHHHHH
Confidence 999999998763 33222211 2222 55899999999999863
No 80
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=99.87 E-value=1.5e-20 Score=222.31 Aligned_cols=343 Identities=13% Similarity=0.088 Sum_probs=241.4
Q ss_pred HHHcCCCCeEEEECCCChHHHHHHHHHh--------------cCCcEEEEEcCCccccc---ccch-------------h
Q 002909 403 LDLMEGKPDLIIGNYSDGNLVASLMASK--------------LGITQATIAHALEKSKY---EDSD-------------A 452 (867)
Q Consensus 403 ~~~l~~kPDIIh~h~~~~~l~a~lla~~--------------~gip~V~t~H~l~~~~~---~~s~-------------~ 452 (867)
.+.++.+||+||+|.|.++++...+.+. .+.++|+|.|++.+... .... +
T Consensus 155 l~~l~~~pdviH~ND~Htal~~~el~r~l~~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~~~~~~~~~~gl 234 (601)
T TIGR02094 155 LRALGIDPDVYHLNEGHAAFVTLERIRELIAQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRKYFGDYAANLGL 234 (601)
T ss_pred HHHcCCCceEEEeCCchHHHHHHHHHHHHHHcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHHHhhhhhhHhCC
Confidence 3445679999999999998877664321 13668999999866553 1111 1
Q ss_pred hhhhc---Ccccc-chhhhhHHHHHHhcCCEEEecCHHHHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCC
Q 002909 453 KWKEL---DPKYH-FSCQFTADLIAMNQTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAP 528 (867)
Q Consensus 453 ~~~~~---~~~y~-f~~~~~~e~ial~~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpn 528 (867)
.+..+ ...+. ...++.--..++..||.|.+||+...+..++..+. ++ .+.+....++.-|-|
T Consensus 235 ~~~~~~~~~~~~~~~~~~vnm~~lai~~S~~vngVS~lh~~v~~~l~~~-----------l~---~~~~~~~~~i~gItN 300 (601)
T TIGR02094 235 PREQLLALGRENPDDPEPFNMTVLALRLSRIANGVSKLHGEVSRKMWQF-----------LY---PGYEEEEVPIGYVTN 300 (601)
T ss_pred CHHHHHhhhhhccCccCceeHHHHHHHhCCeeeeecHHHHHHHHHHHHh-----------hh---hhcccccCCccceeC
Confidence 11100 00000 00123334568899999999998665422221111 00 011111345888999
Q ss_pred CCCCCCCCCCchHhhhhccCCcc----------------------hHHhhhccccccc---------------------c
Q 002909 529 GADQSVYFPYTEKQKRLTSFHPD----------------------IEELLYSKEDNSE---------------------H 565 (867)
Q Consensus 529 GVD~~~f~p~~~~~~r~~~~~~~----------------------i~~~l~~~~~~~~---------------------~ 565 (867)
|||...+.|.+..........+. .+.+..++....+ .
T Consensus 301 GId~~~W~~~~~~~l~~~y~~~~w~~~~~~~~~~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~ 380 (601)
T TIGR02094 301 GVHNPTWVAPELRDLYERYLGENWRELLADEELWEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADAAILMA 380 (601)
T ss_pred CccccccCCHHHHHHHHHhCCcchhccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcchhhhh
Confidence 99999988765544322222212 1233333433333 4
Q ss_pred cccccCCCCcEEEEEeccCCcCChHHHHHHHHHhHccC----CCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCC
Q 002909 566 IGYLADRKKPIIFSMARLDTVKNITGLTEWYGKNKRLR----NMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQL 641 (867)
Q Consensus 566 lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~~~----~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L 641 (867)
+|+..+++.+++++++|+..+||++.+++++.++.+.. .++++|+.|.+.+ .|....++++.+..++++...
T Consensus 381 ~gl~~dpd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~pvq~V~~Gka~p----~d~~gk~~i~~i~~la~~~~~ 456 (601)
T TIGR02094 381 TDRFLDPDVLTIGFARRFATYKRADLIFRDLERLARILNNPERPVQIVFAGKAHP----ADGEGKEIIQRIVEFSKRPEF 456 (601)
T ss_pred hccccCCCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCc----ccchHHHHHHHHHHHHhcccC
Confidence 56656889999999999999999999999988886421 4699999999965 455667788888888887556
Q ss_pred CCcEEEcccccCCCChHHHHHHHHccCcEEEE-cCC-CCCCCHHHHHHHHcCCCEEecCCCCccceeecCceEEEeCC--
Q 002909 642 QGQFRWIAAQTDRYRNGELYRCIADTKGAFVQ-PAL-YEAFGLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDP-- 717 (867)
Q Consensus 642 ~~~V~flG~~~d~v~~~el~~~la~~aDvfV~-PS~-~EgfGltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~p-- 717 (867)
+++|.|+--- +..+.+.+..++|++++ ||+ +|++|++-+=||..|.+.+++--|...|.. ++.|||.|.+
T Consensus 457 ~~kv~f~~~Y-----d~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~-~~~nGf~f~~~~ 530 (601)
T TIGR02094 457 RGRIVFLENY-----DINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGY-DGDNGWAIGDGE 530 (601)
T ss_pred CCCEEEEcCC-----CHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccC-CCCcEEEECCCc
Confidence 7889887521 34677777778999999 999 999999999999999999999999998887 6789999984
Q ss_pred ----------CCHHHHHHHHHHHH-HHhhcC-----HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 002909 718 ----------NNGDESSNKIADFF-EKCKTD-----AGYWNQMSAAGRQRIYECYTWKIYANKVLNMG 769 (867)
Q Consensus 718 ----------~d~e~lA~aI~~ll-~~~~~d-----p~~~~~m~~~ar~~v~~~ysw~~~a~~ll~ly 769 (867)
.|++++-++|.+.+ ....++ |..|.+|.++|++.....|||++++++|.++|
T Consensus 531 ~~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~y 598 (601)
T TIGR02094 531 EYDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKF 598 (601)
T ss_pred cccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHh
Confidence 88999999997766 434444 66799999999987767899999999999975
No 81
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.87 E-value=3.3e-20 Score=210.58 Aligned_cols=262 Identities=13% Similarity=0.121 Sum_probs=182.0
Q ss_pred CCCeEEEECCCChH-HHHHHHHH-----hcCCcEEEEEcCCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEE
Q 002909 408 GKPDLIIGNYSDGN-LVASLMAS-----KLGITQATIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFII 481 (867)
Q Consensus 408 ~kPDIIh~h~~~~~-l~a~lla~-----~~gip~V~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~II 481 (867)
.+||+||++++..+ ..+..+++ ..++|++++++++.... ..| ..+.+|.++
T Consensus 99 ~~pDvIi~thp~~~~~~~~~l~~~~~~~~~~~p~~~~~tD~~~~~-----~~w------------------~~~~~d~~~ 155 (382)
T PLN02605 99 YKPDIIVSVHPLMQHVPLRVLRWQGKELGKKIPFTTVVTDLGTCH-----PTW------------------FHKGVTRCF 155 (382)
T ss_pred cCcCEEEEeCcCcccCHHHHHHHHhhccCCCCCEEEEECCCCCcC-----ccc------------------ccCCCCEEE
Confidence 48999999765422 12222222 24789887776642110 011 347899999
Q ss_pred ecCHHHHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccc
Q 002909 482 TSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKED 561 (867)
Q Consensus 482 a~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~ 561 (867)
++|+...+.+. ..|++ .+|+.++++++|.+.+.+......
T Consensus 156 ~~s~~~~~~l~--------------------~~g~~--~~ki~v~g~~v~~~f~~~~~~~~~------------------ 195 (382)
T PLN02605 156 CPSEEVAKRAL--------------------KRGLE--PSQIRVYGLPIRPSFARAVRPKDE------------------ 195 (382)
T ss_pred ECCHHHHHHHH--------------------HcCCC--HHHEEEECcccCHhhccCCCCHHH------------------
Confidence 99987655221 23555 789999999998754433221111
Q ss_pred cccccccccCCCCcEEEEEeccCCcCChHHHHHHHHHhHc----cCCCeE-EEEEeCCCCCCCCCChHHHHHHHHHHHHH
Q 002909 562 NSEHIGYLADRKKPIIFSMARLDTVKNITGLTEWYGKNKR----LRNMVN-LVVVAGFFDPSKSHDREEIAEIKKMHTLI 636 (867)
Q Consensus 562 ~~~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~----~~~~v~-LvIVG~g~~~~~~~d~ee~~~~~~l~~li 636 (867)
.++.+|+ ++++++|+++|+....|++..+++++..+.. ..++.+ ++++|.+.. ..+.+++.
T Consensus 196 ~r~~~gl--~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~~-----------~~~~L~~~- 261 (382)
T PLN02605 196 LRRELGM--DEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNKK-----------LQSKLESR- 261 (382)
T ss_pred HHHHcCC--CCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCHH-----------HHHHHHhh-
Confidence 1256787 7788999999999999999999999976531 135566 455665421 12333332
Q ss_pred HHcCCCCcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCC------CCccceeecCc
Q 002909 637 EKYQLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQ------GGPAEIIIDGV 710 (867)
Q Consensus 637 ~~~~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~------gG~~EiI~dg~ 710 (867)
....+|+|+|+++ ++..+|+. ||++|.++ .|++++|||+||+|+|+++. |+. +.+.+++
T Consensus 262 ---~~~~~v~~~G~~~------~~~~l~~a-aDv~V~~~----g~~ti~EAma~g~PvI~~~~~pgqe~gn~-~~i~~~g 326 (382)
T PLN02605 262 ---DWKIPVKVRGFVT------NMEEWMGA-CDCIITKA----GPGTIAEALIRGLPIILNGYIPGQEEGNV-PYVVDNG 326 (382)
T ss_pred ---cccCCeEEEeccc------cHHHHHHh-CCEEEECC----CcchHHHHHHcCCCEEEecCCCccchhhH-HHHHhCC
Confidence 2345799999764 46777776 99999865 48899999999999999984 444 4445566
Q ss_pred eEEEeCCCCHHHHHHHHHHHHHHhhcC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 002909 711 SGFHIDPNNGDESSNKIADFFEKCKTD-AGYWNQMSAAGRQRIYECYTWKIYANKVLNM 768 (867)
Q Consensus 711 ~G~lv~p~d~e~lA~aI~~ll~~~~~d-p~~~~~m~~~ar~~v~~~ysw~~~a~~ll~l 768 (867)
.|+.+ +|+++++++|.+++ .| ++.+++|++++++.. ...+++.+++.+.++
T Consensus 327 ~g~~~--~~~~~la~~i~~ll----~~~~~~~~~m~~~~~~~~-~~~a~~~i~~~l~~~ 378 (382)
T PLN02605 327 FGAFS--ESPKEIARIVAEWF----GDKSDELEAMSENALKLA-RPEAVFDIVHDLHEL 378 (382)
T ss_pred ceeec--CCHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhc-CCchHHHHHHHHHHH
Confidence 77765 69999999999998 66 999999999999887 677888888877764
No 82
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=99.87 E-value=4e-21 Score=234.51 Aligned_cols=323 Identities=15% Similarity=0.096 Sum_probs=213.8
Q ss_pred HHHHHHHHHcCCCCeEEEECCCChHHHHHHHHHh-cCCcEEEEEcCCcccccccchhhhhhcCccccchhhhhHHHHHHh
Q 002909 397 DATAKILDLMEGKPDLIIGNYSDGNLVASLMASK-LGITQATIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMN 475 (867)
Q Consensus 397 ~~~~~i~~~l~~kPDIIh~h~~~~~l~a~lla~~-~gip~V~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~ 475 (867)
.++..+.+.. ..-|+|..|.+...+++..+.++ ...++.+..|..++....+..+.|. ..-...|-
T Consensus 122 ~fA~~~~~~~-~~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlH~pfP~~~~f~~lp~~------------~~ll~~ll 188 (726)
T PRK14501 122 RFAEAIAAIA-RPGDVVWVHDYQLMLLPAMLRERLPDARIGFFLHIPFPSFEVFRLLPWR------------EEILEGLL 188 (726)
T ss_pred HHHHHHHHhc-CCCCEEEEeCchhhhHHHHHHhhCCCCcEEEEeeCCCCChHHHhhCCCh------------HHHHHHHh
Confidence 3444444443 23489999999888888888765 3578889999877654322222211 11123788
Q ss_pred cCCEEEecCHHHHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHh
Q 002909 476 QTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEEL 555 (867)
Q Consensus 476 ~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~ 555 (867)
.+|.|-..+......+.+........ -+... .....|- ..++.++|||||.+.|.+......... ...
T Consensus 189 ~~Dligf~t~~~~r~Fl~~~~~~l~~--~~~~~-~~~~~gr---~~~v~v~p~GID~~~f~~~~~~~~~~~----~~~-- 256 (726)
T PRK14501 189 GADLIGFHTYDYVRHFLSSVLRVLGY--ETELG-EIRLGGR---IVRVDAFPMGIDYDKFHNSAQDPEVQE----EIR-- 256 (726)
T ss_pred cCCeEEeCCHHHHHHHHHHHHHHcCC--ccCCC-eEEECCE---EEEEEEEECeEcHHHHHHHhcCchHHH----HHH--
Confidence 99999999987655332221110000 00000 0111121 236899999999998866432111000 000
Q ss_pred hhcccccccccccccCCCCcEEEEEeccCCcCChHHHHHHHHHhHccCCC----eEEEEEeCCCCCCCCCChHHHHHHHH
Q 002909 556 LYSKEDNSEHIGYLADRKKPIIFSMARLDTVKNITGLTEWYGKNKRLRNM----VNLVVVAGFFDPSKSHDREEIAEIKK 631 (867)
Q Consensus 556 l~~~~~~~~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~~----v~LvIVG~g~~~~~~~d~ee~~~~~~ 631 (867)
+-... .+++++|+++||+++.||+..+++|+.++.+.+|+ ++|+++|.+.. ...++..++...
T Consensus 257 --------~lr~~--~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr---~~~~~~~~l~~~ 323 (726)
T PRK14501 257 --------RLRQD--LRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSR---TGVPQYQEMKRE 323 (726)
T ss_pred --------HHHHH--cCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCC---cchHHHHHHHHH
Confidence 00011 24678999999999999999999999998777665 78999985432 011233344555
Q ss_pred HHHHHHHcC----C---CCcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHc-----CCCEEecCC
Q 002909 632 MHTLIEKYQ----L---QGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNC-----GLPTFATNQ 699 (867)
Q Consensus 632 l~~li~~~~----L---~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~-----GlPVIat~~ 699 (867)
+.+++.+.+ . .+.+.|.| .++.+++..+|+. ||+||+||..||||++++|||+| |.||++...
T Consensus 324 ~~~~v~~in~~~~~~~~~pv~~~~~----~~~~~~l~~ly~~-aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~ 398 (726)
T PRK14501 324 IDELVGRINGEFGTVDWTPIHYFYR----SLPFEELVALYRA-ADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMA 398 (726)
T ss_pred HHHHHHHHHhhcCCCCcceEEEEeC----CCCHHHHHHHHHh-ccEEEecccccccCcccceEEEEcCCCCceEEEeccc
Confidence 555655433 1 12234556 4667899999997 99999999999999999999999 456777777
Q ss_pred CCccceeecCceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Q 002909 700 GGPAEIIIDGVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKVLNMGS 770 (867)
Q Consensus 700 gG~~EiI~dg~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll~ly~ 770 (867)
|+..+++ .|++++|.|++++|++|.+++. .+++.+.+..+++++++ .+|||...++++++.+.
T Consensus 399 G~~~~l~----~~llv~P~d~~~la~ai~~~l~---~~~~e~~~r~~~~~~~v-~~~~~~~w~~~~l~~l~ 461 (726)
T PRK14501 399 GAAAELA----EALLVNPNDIEGIAAAIKRALE---MPEEEQRERMQAMQERL-RRYDVHKWASDFLDELR 461 (726)
T ss_pred chhHHhC----cCeEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHH
Confidence 8888775 4899999999999999999883 34455555556788887 79999999999998654
No 83
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.86 E-value=1.1e-19 Score=186.82 Aligned_cols=121 Identities=31% Similarity=0.511 Sum_probs=103.3
Q ss_pred EEeccCCcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccccCCCChH
Q 002909 579 SMARLDTVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTDRYRNG 658 (867)
Q Consensus 579 ~vGRL~~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d~v~~~ 658 (867)
++|++.+.||++.+++++..+.+..++++++++|++.+ .......+.+++..++|.++|+.. ..
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~~~~~----~~ 172 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAGDGPE------------REYLEELLAALLLLDRVIFLGGLD----PE 172 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeEEEEEeCCCC------------hHHHHHHHHhcCCcccEEEeCCCC----cH
Confidence 99999999999999999999988888999999999876 233334466778889999999642 23
Q ss_pred HHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCCccceeecCceEEEe
Q 002909 659 ELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHI 715 (867)
Q Consensus 659 el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv 715 (867)
+....+.+.||++++|+..|++|++++|||+||+|+|+|+.++..|++.++.+|+++
T Consensus 173 ~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 173 ELLALLLAAADVFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred HHHHHHhhcCCEEEecccccCcChHHHHHHhCCCCEEEcCCCCcceEEECCCceEEC
Confidence 444444445999999999999999999999999999999999999999999999875
No 84
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.84 E-value=1.2e-19 Score=206.58 Aligned_cols=261 Identities=15% Similarity=0.155 Sum_probs=177.8
Q ss_pred CCCeEEEECCCChHHHHHHHHHhcCCcEEEEEcCCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHHH
Q 002909 408 GKPDLIIGNYSDGNLVASLMASKLGITQATIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQE 487 (867)
Q Consensus 408 ~kPDIIh~h~~~~~l~a~lla~~~gip~V~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~~ 487 (867)
.+||+||++++..++.....++..++|+++..++..... .| ..+.+|.+++.|+..
T Consensus 103 ~kPDvVi~~~p~~~~~~l~~~~~~~iP~~~v~td~~~~~------~w------------------~~~~~d~~~v~s~~~ 158 (391)
T PRK13608 103 EKPDLILLTFPTPVMSVLTEQFNINIPVATVMTDYRLHK------NW------------------ITPYSTRYYVATKET 158 (391)
T ss_pred hCcCEEEECCcHHHHHHHHHhcCCCCCEEEEeCCCCccc------cc------------------ccCCCCEEEECCHHH
Confidence 499999998766543323333456899875544421110 11 236799999999877
Q ss_pred HhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccccccc
Q 002909 488 IAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHIG 567 (867)
Q Consensus 488 ~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~lG 567 (867)
.+.+. ..|++ ..++.++.++++.....+...... +.++|
T Consensus 159 ~~~l~--------------------~~gi~--~~ki~v~GiPv~~~f~~~~~~~~~-------------------~~~~~ 197 (391)
T PRK13608 159 KQDFI--------------------DVGID--PSTVKVTGIPIDNKFETPIDQKQW-------------------LIDNN 197 (391)
T ss_pred HHHHH--------------------HcCCC--HHHEEEECeecChHhcccccHHHH-------------------HHHcC
Confidence 65221 23555 678889888777433222211111 13466
Q ss_pred cccCCCCcE-EEEEeccCCcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEE
Q 002909 568 YLADRKKPI-IFSMARLDTVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFR 646 (867)
Q Consensus 568 ll~~~~k~i-Il~vGRL~~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~ 646 (867)
+ ++++++ +++.|+++..||++.+++++. +..+++++++++|+.. ...+ ++.+.++..++|.
T Consensus 198 l--~~~~~~ilv~~G~lg~~k~~~~li~~~~---~~~~~~~~vvv~G~~~----------~l~~---~l~~~~~~~~~v~ 259 (391)
T PRK13608 198 L--DPDKQTILMSAGAFGVSKGFDTMITDIL---AKSANAQVVMICGKSK----------ELKR---SLTAKFKSNENVL 259 (391)
T ss_pred C--CCCCCEEEEECCCcccchhHHHHHHHHH---hcCCCceEEEEcCCCH----------HHHH---HHHHHhccCCCeE
Confidence 6 555554 567899998999999999863 2336789887765432 1122 3333445557899
Q ss_pred EcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCC-CC----ccceeecCceEEEeCCCCHH
Q 002909 647 WIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQ-GG----PAEIIIDGVSGFHIDPNNGD 721 (867)
Q Consensus 647 flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~-gG----~~EiI~dg~~G~lv~p~d~e 721 (867)
++|+.. ++..+|+. ||++|. .+.|+++.|||+||+|+|+++. +| ...++.+.+.|+.. +|++
T Consensus 260 ~~G~~~------~~~~~~~~-aDl~I~----k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~~--~~~~ 326 (391)
T PRK13608 260 ILGYTK------HMNEWMAS-SQLMIT----KPGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKIA--DTPE 326 (391)
T ss_pred EEeccc------hHHHHHHh-hhEEEe----CCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEEe--CCHH
Confidence 999753 46777776 999997 3569999999999999999964 33 22233455566664 4999
Q ss_pred HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 002909 722 ESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKVLNMG 769 (867)
Q Consensus 722 ~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll~ly 769 (867)
+++++|.+++ +|++.+++|++++++.. +.|+++.+++.+++++
T Consensus 327 ~l~~~i~~ll----~~~~~~~~m~~~~~~~~-~~~s~~~i~~~l~~l~ 369 (391)
T PRK13608 327 EAIKIVASLT----NGNEQLTNMISTMEQDK-IKYATQTICRDLLDLI 369 (391)
T ss_pred HHHHHHHHHh----cCHHHHHHHHHHHHHhc-CCCCHHHHHHHHHHHh
Confidence 9999998888 89999999999999876 6799999999999854
No 85
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.83 E-value=1.2e-18 Score=187.23 Aligned_cols=289 Identities=23% Similarity=0.308 Sum_probs=206.8
Q ss_pred CeEEEECCCChHH---HHHHHHHhcCCcEEEEEcCCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHH
Q 002909 410 PDLIIGNYSDGNL---VASLMASKLGITQATIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQ 486 (867)
Q Consensus 410 PDIIh~h~~~~~l---~a~lla~~~gip~V~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~ 486 (867)
+|++|.+...... .........+.+.+...|....................+. ............+.+++.+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 160 (381)
T COG0438 84 YDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPRLLLLLGLLRLL---LKRLKKALRLLADRVIAVSPA 160 (381)
T ss_pred cceeeccccccccchhHHHhhccccCCcEEEeecCCcccccccccchhhHHHHHHH---HHHHHHhccccccEEEECCHH
Confidence 5999987654432 3455556678888888887654332111100000000000 000001111247888888865
Q ss_pred HHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhccccccccc
Q 002909 487 EIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHI 566 (867)
Q Consensus 487 ~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~l 566 (867)
.....+.. +. ..++.+++||++.+.+.+.. .
T Consensus 161 ~~~~~~~~--------------------~~---~~~~~~~~~~~~~~~~~~~~--------------------------~ 191 (381)
T COG0438 161 LKELLEAL--------------------GV---PNKIVVIPNGIDTEKFAPAR--------------------------I 191 (381)
T ss_pred HHHHHHHh--------------------CC---CCCceEecCCcCHHHcCccc--------------------------c
Confidence 42211110 00 23688999999988776530 1
Q ss_pred ccccCCCCcEEEEEeccCCcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEE
Q 002909 567 GYLADRKKPIIFSMARLDTVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFR 646 (867)
Q Consensus 567 Gll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~ 646 (867)
++........++++||+.+.||++.+++++..+.+..++++++++|.+... .+.+..++.+++..++|.
T Consensus 192 ~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~-----------~~~~~~~~~~~~~~~~v~ 260 (381)
T COG0438 192 GLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPER-----------REELEKLAKKLGLEDNVK 260 (381)
T ss_pred CCCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCCeEEEEEcCCCcc-----------HHHHHHHHHHhCCCCcEE
Confidence 110011147899999999999999999999999887667999999999751 345566888888889999
Q ss_pred EcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCCccceeecCceEEEeCCCCHHHHHHH
Q 002909 647 WIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDPNNGDESSNK 726 (867)
Q Consensus 647 flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~p~d~e~lA~a 726 (867)
|+|+.+ ..++..++.. +|++++||.+|+||++++|||+||+|||+++.+|..|++.++.+|+++++.+.++++++
T Consensus 261 ~~g~~~----~~~~~~~~~~-~~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~ 335 (381)
T COG0438 261 FLGYVP----DEELAELLAS-ADVFVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLVPPGDVEELADA 335 (381)
T ss_pred EecccC----HHHHHHHHHh-CCEEEeccccccchHHHHHHHhcCCcEEECCCCChHHHhcCCCceEecCCCCHHHHHHH
Confidence 999644 4577777776 89999999999999999999999999999999999999988878997777789999999
Q ss_pred HHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Q 002909 727 IADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKVLNMGS 770 (867)
Q Consensus 727 I~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll~ly~ 770 (867)
+..++ ++++.++.+++.+++.+.+.|+|+..++++.+++.
T Consensus 336 i~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (381)
T COG0438 336 LEQLL----EDPELREELGEAARERVEEEFSWERIAEQLLELYE 375 (381)
T ss_pred HHHHh----cCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 99988 77788889998777777789999999999888543
No 86
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.82 E-value=2.6e-18 Score=181.99 Aligned_cols=386 Identities=16% Similarity=0.223 Sum_probs=250.1
Q ss_pred hcCCC-cceEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCCCCCCCCC---
Q 002909 275 SRLPN-MFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLIPNSKGTK--- 350 (867)
Q Consensus 275 ~r~pm-~~rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~~~~~g~~--- 350 (867)
.+.+. ...|+++.|+.. ..||-+++..--+|.+.++ . .. ..++|+|.++.-.....
T Consensus 37 ~~~~k~~ktvgfFHPYCN----------AGGGGErVLW~Avr~~q~k----~--~n----~~~viYsGD~n~t~~~IL~k 96 (465)
T KOG1387|consen 37 NRAEKNVKTVGFFHPYCN----------AGGGGERVLWKAVRITQRK----F--PN----NVIVIYSGDFNVTPENILNK 96 (465)
T ss_pred hhhhhhceEEEEeccccc----------CCCCcceehhHHHHHHHHh----C--CC----ceEEEEeCCCCCCHHHHHHH
Confidence 44443 356889988776 3577788888778866552 1 22 23458887642210000
Q ss_pred CCCccccccCCCCeEEEEccCCCcccccccccccccchhhHHHHHHHHH---HHHHHHcCCCCeEEEECCCChHHHHHHH
Q 002909 351 CSQELEPIYDTKHSHILRIPFKTEQAILPQWVSRFDIYPYLGRFAQDAT---AKILDLMEGKPDLIIGNYSDGNLVASLM 427 (867)
Q Consensus 351 ~~~~~e~i~~~~~v~I~rvp~~~~~~~l~~~isr~~i~p~l~~f~~~~~---~~i~~~l~~kPDIIh~h~~~~~l~a~ll 427 (867)
..+..+.--+.+++..+.+..|. |+. ..-|++..-..+.+. -.+.+..+..|||.+-.+.-+ +.--..
T Consensus 97 ~k~~F~idlDs~nI~Fi~Lk~R~-------lVe-a~~~~hfTllgQaigsmIl~~Eai~r~~Pdi~IDtMGY~-fs~p~~ 167 (465)
T KOG1387|consen 97 VKNKFDIDLDSDNIFFIYLKLRY-------LVE-ASTWKHFTLLGQAIGSMILAFEAIIRFPPDIFIDTMGYP-FSYPIF 167 (465)
T ss_pred HHHhcCceecccceEEEEEEeee-------eee-cccccceehHHHHHHHHHHHHHHHHhCCchheEecCCCc-chhHHH
Confidence 00111111122355555444332 232 223433332222222 222333467999988553222 112233
Q ss_pred HHhcCCcEEEEEcCCcccc-c-------ccc-------hhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHHHHhhcC
Q 002909 428 ASKLGITQATIAHALEKSK-Y-------EDS-------DAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQEIAGSK 492 (867)
Q Consensus 428 a~~~gip~V~t~H~l~~~~-~-------~~s-------~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~~~~~~k 492 (867)
++..++|++...|-..-.+ . ..+ -.||+.+...|. .+=.+||.++++|......++
T Consensus 168 r~l~~~~V~aYvHYP~iS~DML~~l~qrq~s~~l~~~KlaY~rlFa~lY~---------~~G~~ad~vm~NssWT~nHI~ 238 (465)
T KOG1387|consen 168 RRLRRIPVVAYVHYPTISTDMLKKLFQRQKSGILVWGKLAYWRLFALLYQ---------SAGSKADIVMTNSSWTNNHIK 238 (465)
T ss_pred HHHccCceEEEEecccccHHHHHHHHhhhhcchhhhHHHHHHHHHHHHHH---------hccccceEEEecchhhHHHHH
Confidence 4577899998888421111 0 011 123333222221 133679999999987665554
Q ss_pred CCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccccccccccCC
Q 002909 493 DRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHIGYLADR 572 (867)
Q Consensus 493 ~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~lGll~~~ 572 (867)
+.++ ..++.+|+|.++++..... .+- ++.
T Consensus 239 qiW~-----------------------~~~~~iVyPPC~~e~lks~---------------------------~~t-e~~ 267 (465)
T KOG1387|consen 239 QIWQ-----------------------SNTCSIVYPPCSTEDLKSK---------------------------FGT-EGE 267 (465)
T ss_pred HHhh-----------------------ccceeEEcCCCCHHHHHHH---------------------------hcc-cCC
Confidence 4433 3467889998887622111 011 145
Q ss_pred CCcEEEEEeccCCcCChHHHHHHHHHhHcc------CCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEE
Q 002909 573 KKPIIFSMARLDTVKNITGLTEWYGKNKRL------RNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFR 646 (867)
Q Consensus 573 ~k~iIl~vGRL~~~Kgid~LieA~~~l~~~------~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~ 646 (867)
+.+.++++|.+.|+||.. +++.++....+ .++++|+++|+... .+..++.+.|+.++++++++++|.
T Consensus 268 r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivGScRn------eeD~ervk~Lkd~a~~L~i~~~v~ 340 (465)
T KOG1387|consen 268 RENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVGSCRN------EEDEERVKSLKDLAEELKIPKHVQ 340 (465)
T ss_pred cceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEeccCC------hhhHHHHHHHHHHHHhcCCccceE
Confidence 678899999999999999 55554433322 25689999999754 345567789999999999999999
Q ss_pred EcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCCcc-ceeec---CceEEEeCCCCHHH
Q 002909 647 WIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPA-EIIID---GVSGFHIDPNNGDE 722 (867)
Q Consensus 647 flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG~~-EiI~d---g~~G~lv~p~d~e~ 722 (867)
|.- .++.+++..++.. |.+.|+.-+.|.||+.++|+||+|+-.|+.+.||+. |||.+ ..+||+.. +.++
T Consensus 341 F~~----N~Py~~lv~lL~~-a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGFla~--t~~E 413 (465)
T KOG1387|consen 341 FEK----NVPYEKLVELLGK-ATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGFLAP--TDEE 413 (465)
T ss_pred EEe----cCCHHHHHHHhcc-ceeehhhhhhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccCCccceeecC--ChHH
Confidence 977 5889999999997 999999999999999999999999999999999985 56654 35799985 7789
Q ss_pred HHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 002909 723 SSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKVLN 767 (867)
Q Consensus 723 lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll~ 767 (867)
.|+++.+++. .|++.+..|.++||..+ .+|+=....+.+.+
T Consensus 414 YaE~iLkIv~---~~~~~r~~~r~~AR~s~-~RFsE~~F~kd~~~ 454 (465)
T KOG1387|consen 414 YAEAILKIVK---LNYDERNMMRRNARKSL-ARFGELKFDKDWEN 454 (465)
T ss_pred HHHHHHHHHH---cCHHHHHHHHHHHHHHH-HHhhHHHHHHhHhH
Confidence 9999999985 78888999999999988 78887766666655
No 87
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=99.80 E-value=4.4e-18 Score=196.05 Aligned_cols=323 Identities=12% Similarity=0.014 Sum_probs=219.0
Q ss_pred HHHHHHHHcCCCCeEEEECCCChHHHHHHHHHh-cCCcEEEEEcCCcccccccchhhhhhcCccccchhhhhHHHHHHhc
Q 002909 398 ATAKILDLMEGKPDLIIGNYSDGNLVASLMASK-LGITQATIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQ 476 (867)
Q Consensus 398 ~~~~i~~~l~~kPDIIh~h~~~~~l~a~lla~~-~gip~V~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~ 476 (867)
++..+.+.. ..-|+|-.|.....+++..+.++ ...++-+..|..++..-.+..+.|. ..-+..|-.
T Consensus 122 FA~~i~~~~-~~~d~vWVhDYhL~llp~~LR~~~~~~~IgfFlHiPFPs~eifr~LP~r------------~~ll~glL~ 188 (487)
T TIGR02398 122 FAEAACLEA-AEGATVWVHDYNLWLVPGYIRQLRPDLKIAFFHHTPFPSADVFNILPWR------------EQIIGSLLC 188 (487)
T ss_pred HHHHHHHhc-CCCCEEEEecchhhHHHHHHHHhCCCCeEEEEeeCCCCChHHHhhCCch------------HHHHHHHhc
Confidence 333444443 23489999998888888888765 3467778899866554222222221 111237788
Q ss_pred CCEEEecCHHHHhhcCCCCCccccccc-cc---cccc---------eeeeccCCCC--CCcEEEeCCCCCCCCCCCCchH
Q 002909 477 TDFIITSTYQEIAGSKDRPGQYESHTA-FT---MPGL---------CRVVSGINVF--DPKFNIAAPGADQSVYFPYTEK 541 (867)
Q Consensus 477 aD~IIa~S~~~~~~~k~~~gqY~s~~~-~~---lp~l---------~~v~~GI~~~--~~ki~VIpnGVD~~~f~p~~~~ 541 (867)
+|.|-..|+..+..+-+.......... .. .+.. .....+|... .-++.++|.|||.+.|.+....
T Consensus 189 aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~ 268 (487)
T TIGR02398 189 CDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPERIRSALAA 268 (487)
T ss_pred CCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccccccccccceeECCEEEEEEEEECEecHHHHHHHhcC
Confidence 999999998776544332221100000 00 0000 0000011111 1247899999999888554211
Q ss_pred h---hhhccCCcchHHhhhcccccccccccccCCCCcEEEEEeccCCcCChHHHHHHHHHhHccCCC----eEEEEEeCC
Q 002909 542 Q---KRLTSFHPDIEELLYSKEDNSEHIGYLADRKKPIIFSMARLDTVKNITGLTEWYGKNKRLRNM----VNLVVVAGF 614 (867)
Q Consensus 542 ~---~r~~~~~~~i~~~l~~~~~~~~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~~----v~LvIVG~g 614 (867)
. .+... .++.+| ++++|++++|++..||+...++||.++.+.+|+ +.|++||.+
T Consensus 269 ~~~~~~~~~--------------lr~~~~-----~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv~Lvqi~~p 329 (487)
T TIGR02398 269 ASIREMMER--------------IRSELA-----GVKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACVP 329 (487)
T ss_pred chHHHHHHH--------------HHHHcC-----CceEEEEecccccccCHHHHHHHHHHHHHhCccccCceEEEEEeCC
Confidence 1 11110 112232 678999999999999999999999999877775 799999987
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHc-------CCCCcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHH
Q 002909 615 FDPSKSHDREEIAEIKKMHTLIEKY-------QLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEA 687 (867)
Q Consensus 615 ~~~~~~~d~ee~~~~~~l~~li~~~-------~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEA 687 (867)
.. ...++..++.+++++++.+. +..+-+.+.+ .++.+++..+|.. |||++.+|..||++++..|+
T Consensus 330 sr---~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~----~v~~~el~alYr~-ADV~lvT~lrDGmNLVa~Ey 401 (487)
T TIGR02398 330 AA---SGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTR----SLPYEEVSAWFAM-ADVMWITPLRDGLNLVAKEY 401 (487)
T ss_pred Cc---ccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcC----CCCHHHHHHHHHh-CCEEEECccccccCcchhhH
Confidence 53 23445566677777777765 3344456666 5778999999997 99999999999999999999
Q ss_pred HHcCC----CEEecCCCCccceeecCceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHH
Q 002909 688 MNCGL----PTFATNQGGPAEIIIDGVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYAN 763 (867)
Q Consensus 688 Ma~Gl----PVIat~~gG~~EiI~dg~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~ 763 (867)
|+|+. |+|.|..+|.++.+ ..+++++|.|++++|++|.++++ ...+.+++--+..++++ ..+|....++
T Consensus 402 va~~~~~~GvLILSefaGaa~~l---~~AllVNP~d~~~~A~ai~~AL~---m~~~Er~~R~~~l~~~v-~~~d~~~W~~ 474 (487)
T TIGR02398 402 VAAQGLLDGVLVLSEFAGAAVEL---KGALLTNPYDPVRMDETIYVALA---MPKAEQQARMREMFDAV-NYYDVQRWAD 474 (487)
T ss_pred HhhhcCCCCCEEEeccccchhhc---CCCEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-hhCCHHHHHH
Confidence 99998 99999999998776 35899999999999999999984 55556665556666666 7788888777
Q ss_pred HHHH
Q 002909 764 KVLN 767 (867)
Q Consensus 764 ~ll~ 767 (867)
.++.
T Consensus 475 ~fl~ 478 (487)
T TIGR02398 475 EFLA 478 (487)
T ss_pred HHHH
Confidence 7765
No 88
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=99.78 E-value=9.1e-18 Score=189.15 Aligned_cols=283 Identities=13% Similarity=0.105 Sum_probs=181.8
Q ss_pred HHHHHHHHHHcCCCCeEEEECC-CChHHHHHHHHHhcCCcEEEEEcCCcccccccchhhhhhcCccccchhhhhHHHHHH
Q 002909 396 QDATAKILDLMEGKPDLIIGNY-SDGNLVASLMASKLGITQATIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAM 474 (867)
Q Consensus 396 ~~~~~~i~~~l~~kPDIIh~h~-~~~~l~a~lla~~~gip~V~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial 474 (867)
..+.+.+.+ .+||+||+|. +...+.+.+++++.|+|++++-+++.... ... .|. + ... .....
T Consensus 76 ~~l~~~l~~---~~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~~s~~-~~~--~~~--~----~~~----r~~~~ 139 (365)
T TIGR00236 76 EGLEELLLE---EKPDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGLRTGD-RYS--PMP--E----EIN----RQLTG 139 (365)
T ss_pred HHHHHHHHH---cCCCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCCCcCC-CCC--CCc--c----HHH----HHHHH
Confidence 344444444 4899999996 44567788889999999986655431110 000 010 0 000 11123
Q ss_pred hcCCEEEecCHHHHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCC-CCCCCCCCchHhhhhccCCcchH
Q 002909 475 NQTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGA-DQSVYFPYTEKQKRLTSFHPDIE 553 (867)
Q Consensus 475 ~~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGV-D~~~f~p~~~~~~r~~~~~~~i~ 553 (867)
+.+|.++++|+..++.+.+ .|++ +.++.+++||+ |...+.+......
T Consensus 140 ~~ad~~~~~s~~~~~~l~~--------------------~G~~--~~~I~vign~~~d~~~~~~~~~~~~---------- 187 (365)
T TIGR00236 140 HIADLHFAPTEQAKDNLLR--------------------ENVK--ADSIFVTGNTVIDALLTNVEIAYSS---------- 187 (365)
T ss_pred HHHHhccCCCHHHHHHHHH--------------------cCCC--cccEEEeCChHHHHHHHHHhhccch----------
Confidence 4589999999877663221 2555 77999999997 4321111000000
Q ss_pred HhhhcccccccccccccCCCCcEEEEEe-ccC-CcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHH
Q 002909 554 ELLYSKEDNSEHIGYLADRKKPIIFSMA-RLD-TVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKK 631 (867)
Q Consensus 554 ~~l~~~~~~~~~lGll~~~~k~iIl~vG-RL~-~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~ 631 (867)
...+.+|. +++++++++ |.. ..||++.+++|+.++.+..++++++++|++.. ...+
T Consensus 188 -------~~~~~~~~----~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~----------~~~~- 245 (365)
T TIGR00236 188 -------PVLSEFGE----DKRYILLTLHRRENVGEPLENIFKAIREIVEEFEDVQIVYPVHLNP----------VVRE- 245 (365)
T ss_pred -------hHHHhcCC----CCCEEEEecCchhhhhhHHHHHHHHHHHHHHHCCCCEEEEECCCCh----------HHHH-
Confidence 00122331 234555554 542 45899999999999877778899998875432 1111
Q ss_pred HHHHHHHcCCCCcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEec-CCCCccceeecCc
Q 002909 632 MHTLIEKYQLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT-NQGGPAEIIIDGV 710 (867)
Q Consensus 632 l~~li~~~~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat-~~gG~~EiI~dg~ 710 (867)
.+.+.++..++|+|+|. +...++..++++ +|+++.+| |..++|||+||+|||++ +.|+..|++.++
T Consensus 246 --~~~~~~~~~~~v~~~~~----~~~~~~~~~l~~-ad~vv~~S-----g~~~~EA~a~g~PvI~~~~~~~~~e~~~~g- 312 (365)
T TIGR00236 246 --PLHKHLGDSKRVHLIEP----LEYLDFLNLAAN-SHLILTDS-----GGVQEEAPSLGKPVLVLRDTTERPETVEAG- 312 (365)
T ss_pred --HHHHHhCCCCCEEEECC----CChHHHHHHHHh-CCEEEECC-----hhHHHHHHHcCCCEEECCCCCCChHHHhcC-
Confidence 23344566678999994 445678888887 99999887 56689999999999996 678888888766
Q ss_pred eEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 002909 711 SGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKVLN 767 (867)
Q Consensus 711 ~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll~ 767 (867)
+|+++ +.|+++++++|..++ +|++.+++|+++...+ .+..+++++++.+.+
T Consensus 313 ~~~lv-~~d~~~i~~ai~~ll----~~~~~~~~~~~~~~~~-g~~~a~~ri~~~l~~ 363 (365)
T TIGR00236 313 TNKLV-GTDKENITKAAKRLL----TDPDEYKKMSNASNPY-GDGEASERIVEELLN 363 (365)
T ss_pred ceEEe-CCCHHHHHHHHHHHH----hChHHHHHhhhcCCCC-cCchHHHHHHHHHHh
Confidence 56666 579999999998887 8999998888766322 234455555555544
No 89
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.78 E-value=2.8e-17 Score=185.88 Aligned_cols=249 Identities=12% Similarity=0.108 Sum_probs=160.6
Q ss_pred CCCeEEEECCCCh-HHHHHHHHHhcCCcEEEEEcCCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHH
Q 002909 408 GKPDLIIGNYSDG-NLVASLMASKLGITQATIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQ 486 (867)
Q Consensus 408 ~kPDIIh~h~~~~-~l~a~lla~~~gip~V~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~ 486 (867)
.+||+||++.+.+ .......+++.|+|+++..|.. .|...... .. ...+.+|.|+++|+.
T Consensus 84 ~kPdivi~~~~~~~~~~~a~~a~~~~ip~i~~~~~~----------~~~~~~~~--------~~-~~~~~~d~i~~~~~~ 144 (380)
T PRK00025 84 EPPDVFIGIDAPDFNLRLEKKLRKAGIPTIHYVSPS----------VWAWRQGR--------AF-KIAKATDHVLALFPF 144 (380)
T ss_pred cCCCEEEEeCCCCCCHHHHHHHHHCCCCEEEEeCCc----------hhhcCchH--------HH-HHHHHHhhheeCCcc
Confidence 4999999876432 2222344567799998765531 11100000 01 135678999999975
Q ss_pred HHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhccccccccc
Q 002909 487 EIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHI 566 (867)
Q Consensus 487 ~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~l 566 (867)
+.+...+ .|+ ++.++.|++......+..... .+..+
T Consensus 145 ~~~~~~~--------------------~g~-----~~~~~G~p~~~~~~~~~~~~~-------------------~~~~l 180 (380)
T PRK00025 145 EAAFYDK--------------------LGV-----PVTFVGHPLADAIPLLPDRAA-------------------ARARL 180 (380)
T ss_pred CHHHHHh--------------------cCC-----CeEEECcCHHHhcccccChHH-------------------HHHHc
Confidence 5442111 121 245555554322111111111 11446
Q ss_pred ccccCCCCcEEE-EEe-ccCCc-CChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHc-CCC
Q 002909 567 GYLADRKKPIIF-SMA-RLDTV-KNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKY-QLQ 642 (867)
Q Consensus 567 Gll~~~~k~iIl-~vG-RL~~~-Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~-~L~ 642 (867)
|+ ++++++++ +.| |.... ++++.+++++..+.+..++++++++|+++. ..+.+++.++++ ++.
T Consensus 181 ~~--~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~~-----------~~~~~~~~~~~~~~~~ 247 (380)
T PRK00025 181 GL--DPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVNPK-----------RREQIEEALAEYAGLE 247 (380)
T ss_pred CC--CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCChh-----------hHHHHHHHHhhcCCCC
Confidence 66 55666654 444 44444 457899999999987778899999987422 245566666666 553
Q ss_pred CcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEec-----------------CCCCccce
Q 002909 643 GQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT-----------------NQGGPAEI 705 (867)
Q Consensus 643 ~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat-----------------~~gG~~Ei 705 (867)
+.+.. +++..+|+. ||++|.+| |.+.+|||+||+|+|++ +.++.+++
T Consensus 248 --v~~~~--------~~~~~~~~~-aDl~v~~s-----G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~ 311 (380)
T PRK00025 248 --VTLLD--------GQKREAMAA-ADAALAAS-----GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNL 311 (380)
T ss_pred --eEEEc--------ccHHHHHHh-CCEEEECc-----cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHH
Confidence 55433 257777776 99999987 88889999999999987 56677788
Q ss_pred eecCc--eEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHH
Q 002909 706 IIDGV--SGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRI 752 (867)
Q Consensus 706 I~dg~--~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v 752 (867)
+.++. .+++.+..|++++++++.+++ .|++.+++|++++.+..
T Consensus 312 ~~~~~~~~~~~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~ 356 (380)
T PRK00025 312 LAGRELVPELLQEEATPEKLARALLPLL----ADGARRQALLEGFTELH 356 (380)
T ss_pred hcCCCcchhhcCCCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHH
Confidence 87653 567778889999999999988 89999999999875444
No 90
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=99.76 E-value=8.3e-17 Score=179.45 Aligned_cols=243 Identities=13% Similarity=0.129 Sum_probs=163.2
Q ss_pred CC-eEEEECCCChH---HHHHH--HHHhcCCcEEEEEcCCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEe
Q 002909 409 KP-DLIIGNYSDGN---LVASL--MASKLGITQATIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIIT 482 (867)
Q Consensus 409 kP-DIIh~h~~~~~---l~a~l--la~~~gip~V~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa 482 (867)
++ |+||.+++... +...+ ..++.|+|+|+++|++++........ + ...+...++.+|.||+
T Consensus 63 ~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~~~~~~~----------~---~~~~~~~~~~aD~iI~ 129 (333)
T PRK09814 63 KPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLRFDSNYY----------L---MKEEIDMLNLADVLIV 129 (333)
T ss_pred CCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHhccccch----------h---hHHHHHHHHhCCEEEE
Confidence 66 99999886442 11222 22445899999999987654221110 0 1235568899999999
Q ss_pred cCHHHHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhccccc
Q 002909 483 STYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDN 562 (867)
Q Consensus 483 ~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~ 562 (867)
.|+..++.+++ .|++ ..++.++++..+.....+.
T Consensus 130 ~S~~~~~~l~~--------------------~g~~--~~~i~~~~~~~~~~~~~~~------------------------ 163 (333)
T PRK09814 130 HSKKMKDRLVE--------------------EGLT--TDKIIVQGIFDYLNDIELV------------------------ 163 (333)
T ss_pred CCHHHHHHHHH--------------------cCCC--cCceEeccccccccccccc------------------------
Confidence 99987763322 2443 4567666655433111000
Q ss_pred ccccccccCCCCcEEEEEeccCCcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCC
Q 002909 563 SEHIGYLADRKKPIIFSMARLDTVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQ 642 (867)
Q Consensus 563 ~~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~ 642 (867)
. ..+.++.|+|+|++...+++ ....++++|+|+|+|+.. . ...
T Consensus 164 -~-----~~~~~~~i~yaG~l~k~~~l----------~~~~~~~~l~i~G~g~~~------------~---------~~~ 206 (333)
T PRK09814 164 -K-----TPSFQKKINFAGNLEKSPFL----------KNWSQGIKLTVFGPNPED------------L---------ENS 206 (333)
T ss_pred -c-----cccCCceEEEecChhhchHH----------HhcCCCCeEEEECCCccc------------c---------ccC
Confidence 0 02345689999999953321 112467999999999751 1 345
Q ss_pred CcEEEcccccCCCChHHHHHHHHccCcEEEEcC-C----------CCCCCHHHHHHHHcCCCEEecCCCCccceeecCce
Q 002909 643 GQFRWIAAQTDRYRNGELYRCIADTKGAFVQPA-L----------YEAFGLTVIEAMNCGLPTFATNQGGPAEIIIDGVS 711 (867)
Q Consensus 643 ~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS-~----------~EgfGltvlEAMa~GlPVIat~~gG~~EiI~dg~~ 711 (867)
++|.|+|+ ++.+++..+++. |+.+.+. . .-++|.++.|+||||+|||+++.++..|+|+++.+
T Consensus 207 ~~V~f~G~----~~~eel~~~l~~--~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~~~~V~~~~~ 280 (333)
T PRK09814 207 ANISYKGW----FDPEELPNELSK--GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAIADFIVENGL 280 (333)
T ss_pred CCeEEecC----CCHHHHHHHHhc--CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCccHHHHHHhCCc
Confidence 79999995 556799988876 4433322 1 13578899999999999999999999999999999
Q ss_pred EEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHH
Q 002909 712 GFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYA 762 (867)
Q Consensus 712 G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a 762 (867)
|++++ +.++++++|..+ +++.+++|++++++.. +.+.-..++
T Consensus 281 G~~v~--~~~el~~~l~~~------~~~~~~~m~~n~~~~~-~~~~~g~~~ 322 (333)
T PRK09814 281 GFVVD--SLEELPEIIDNI------TEEEYQEMVENVKKIS-KLLRNGYFT 322 (333)
T ss_pred eEEeC--CHHHHHHHHHhc------CHHHHHHHHHHHHHHH-HHHhcchhH
Confidence 99998 778888888763 3566889999998876 444433333
No 91
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=99.75 E-value=1.3e-16 Score=191.88 Aligned_cols=341 Identities=15% Similarity=0.102 Sum_probs=231.5
Q ss_pred HHHcCCCCeEEEECCCChHHHHH-----HHHHh----------cCCcEEEEEcCCccccc--ccch--------------
Q 002909 403 LDLMEGKPDLIIGNYSDGNLVAS-----LMASK----------LGITQATIAHALEKSKY--EDSD-------------- 451 (867)
Q Consensus 403 ~~~l~~kPDIIh~h~~~~~l~a~-----lla~~----------~gip~V~t~H~l~~~~~--~~s~-------------- 451 (867)
++.++.+||+||+|.+.++++.. ++... .+..+|+|.|++.+... ...+
T Consensus 242 Lr~lg~~pdViH~ND~Haal~~lE~~R~ll~~~g~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~~l~~~~~~~~~~~lg 321 (778)
T cd04299 242 LRALGIKPTVYHMNEGHAAFLGLERIRELMAEGGLSFDEALEAVRASTVFTTHTPVPAGHDRFPPDLVERYFGPYARELG 321 (778)
T ss_pred HHHhCCCCeEEEeCCCcHHHHHHHHHHHHHHHcCCCHHHHHHhhCCeEEEecCCchHHHhhhCCHHHHHHHhhHHHHHcC
Confidence 34456789999999999988777 44321 13567999999765541 1111
Q ss_pred hhhhhcCccc-cc----hhhhhHHHHHHhcCCEEEecCHHHHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEe
Q 002909 452 AKWKELDPKY-HF----SCQFTADLIAMNQTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIA 526 (867)
Q Consensus 452 ~~~~~~~~~y-~f----~~~~~~e~ial~~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VI 526 (867)
+.+..+...- .+ ...+.--..++..|+.|.+||+-.-+-.++.+.. ...|.+....++.-|
T Consensus 322 l~~~~~~~lg~e~~~~~~~~~nM~~laL~~S~~vNgVS~lHg~vsr~mf~~--------------~~~g~p~~~~~i~~I 387 (778)
T cd04299 322 LSRDRFLALGRENPGDDPEPFNMAVLALRLAQRANGVSRLHGEVSREMFAG--------------LWPGFPVEEVPIGHV 387 (778)
T ss_pred CCHHHHhhhccccccCccCceeHHHHHHHhcCeeeeecHHHHHHHHHHhhh--------------hhccCCcccCceece
Confidence 1111110000 00 0123334568999999999998542222221111 112333224568899
Q ss_pred CCCCCCCCCC-CCchHhhhhccC-------------------Ccc---hHHhhhcccccccc------------------
Q 002909 527 APGADQSVYF-PYTEKQKRLTSF-------------------HPD---IEELLYSKEDNSEH------------------ 565 (867)
Q Consensus 527 pnGVD~~~f~-p~~~~~~r~~~~-------------------~~~---i~~~l~~~~~~~~~------------------ 565 (867)
-||||...+. |..+.-.. ..+ .+. .+.+.-++....+.
T Consensus 388 TNGVh~~~W~~P~~~~l~~-~~~g~~w~~~~~~~~~~~~~~~i~d~~lw~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~ 466 (778)
T cd04299 388 TNGVHVPTWVAPEMRELYD-RYLGGDWRERPTDPELWEAVDDIPDEELWEVRQQLRRRLIEFVRRRLRRQWLRRGASAEE 466 (778)
T ss_pred eCCcchhhhcCHHHHHHHH-HhcCcchhhccchHHHHhhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCchhh
Confidence 9999998776 53222110 000 001 00111111111111
Q ss_pred ---cccccCCCCcEEEEEeccCCcCChHHHHHHHHHhHcc----CCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHH
Q 002909 566 ---IGYLADRKKPIIFSMARLDTVKNITGLTEWYGKNKRL----RNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEK 638 (867)
Q Consensus 566 ---lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~~----~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~ 638 (867)
.|...+++.++|+++.|+..+|+.+.++..+.++.+. ..++++|+.|.+.+ .|...+..++.+.+++++
T Consensus 467 ~~~~~~~ldpd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKAhP----~d~~gK~iIk~i~~~a~~ 542 (778)
T cd04299 467 IGEADDVLDPNVLTIGFARRFATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAHP----ADEPGKELIQEIVEFSRR 542 (778)
T ss_pred hhhcCCccCCCccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCc----cchHHHHHHHHHHHHHhC
Confidence 2433477888999999999999999999998877542 13599999999865 466678888999999987
Q ss_pred cCCCCcEEEcccccCCCChHHHHHHHHccCcEEEEcCC--CCCCCHHHHHHHHcCCCEEecCCCCccceeecCceEEEeC
Q 002909 639 YQLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPAL--YEAFGLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHID 716 (867)
Q Consensus 639 ~~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~--~EgfGltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~ 716 (867)
....++|.|+-- . +..+.+.+..+||++++||+ +|++|++-+=||.-|.+.+++--|...|.. ++.|||.|.
T Consensus 543 p~~~~kVvfle~----Y-d~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~-~g~nGwaig 616 (778)
T cd04299 543 PEFRGRIVFLED----Y-DMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY-DGENGWAIG 616 (778)
T ss_pred cCCCCcEEEEcC----C-CHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc-CCCCceEeC
Confidence 667789998762 1 34677777778999999999 999999999999999999999999999987 889999998
Q ss_pred C------------CCHHHHHHHHHHHHH-Hhhc-----CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 002909 717 P------------NNGDESSNKIADFFE-KCKT-----DAGYWNQMSAAGRQRIYECYTWKIYANKVLNM 768 (867)
Q Consensus 717 p------------~d~e~lA~aI~~ll~-~~~~-----dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll~l 768 (867)
+ .|.+++-+.|.+-+- ...+ .|..|.+|.+++++.+...|||+++++.|.+-
T Consensus 617 ~~~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~ 686 (778)
T cd04299 617 DGDEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVER 686 (778)
T ss_pred CCccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHH
Confidence 7 456666676754433 3334 27889999999999888899999999999984
No 92
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=99.74 E-value=1e-16 Score=179.80 Aligned_cols=252 Identities=16% Similarity=0.133 Sum_probs=167.0
Q ss_pred CCCeEEEECCCC-hHHHHHHHHHhcCCcEEEEEcCCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHH
Q 002909 408 GKPDLIIGNYSD-GNLVASLMASKLGITQATIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQ 486 (867)
Q Consensus 408 ~kPDIIh~h~~~-~~l~a~lla~~~gip~V~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~ 486 (867)
.+||+||+|... ..+.+.++++..|+|++++.|+..... ....|.. . .....+.+|.++++|+.
T Consensus 87 ~~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s~~---~~~~~~~-------~-----r~~~~~~ad~~~~~s~~ 151 (363)
T cd03786 87 EKPDLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRSFD---RGMPDEE-------N-----RHAIDKLSDLHFAPTEE 151 (363)
T ss_pred hCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEecccccCC---CCCCchH-------H-----HHHHHHHhhhccCCCHH
Confidence 489999999643 456677888889999987766532210 0001110 0 11145678999999987
Q ss_pred HHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCC-CCCCCCCCchHhhhhccCCcchHHhhhcccccccc
Q 002909 487 EIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGA-DQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEH 565 (867)
Q Consensus 487 ~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGV-D~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~ 565 (867)
..+.+. ..|++ ..++.+++|++ |...+.+..... . ..+..
T Consensus 152 ~~~~l~--------------------~~G~~--~~kI~vign~v~d~~~~~~~~~~~-~----------------~~~~~ 192 (363)
T cd03786 152 ARRNLL--------------------QEGEP--PERIFVVGNTMIDALLRLLELAKK-E----------------LILEL 192 (363)
T ss_pred HHHHHH--------------------HcCCC--cccEEEECchHHHHHHHHHHhhcc-c----------------hhhhh
Confidence 765221 23555 78899999985 532221111000 0 00123
Q ss_pred cccccCCCCcEEEEEeccCC---cCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCC-
Q 002909 566 IGYLADRKKPIIFSMARLDT---VKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQL- 641 (867)
Q Consensus 566 lGll~~~~k~iIl~vGRL~~---~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L- 641 (867)
+|+ ++++.+++++||... .||++.+++++..+.+. ++.+++.|++.. .+++++.++++++
T Consensus 193 ~~~--~~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~--~~~vi~~~~~~~------------~~~l~~~~~~~~~~ 256 (363)
T cd03786 193 LGL--LPKKYILVTLHRVENVDDGEQLEEILEALAELAEE--DVPVVFPNHPRT------------RPRIREAGLEFLGH 256 (363)
T ss_pred ccc--CCCCEEEEEeCCccccCChHHHHHHHHHHHHHHhc--CCEEEEECCCCh------------HHHHHHHHHhhccC
Confidence 454 445567788999875 79999999999988653 566666665543 4567777788776
Q ss_pred CCcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCC-CCccceeecCceEEEeCCCCH
Q 002909 642 QGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQ-GGPAEIIIDGVSGFHIDPNNG 720 (867)
Q Consensus 642 ~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~-gG~~EiI~dg~~G~lv~p~d~ 720 (867)
.++|+|+|. ....++..+++. ||++|.+|. |+ +.|||+||+|||+++. +...+.+.+| .++.+. .|+
T Consensus 257 ~~~v~~~~~----~~~~~~~~l~~~-ad~~v~~Sg----gi-~~Ea~~~g~PvI~~~~~~~~~~~~~~g-~~~~~~-~~~ 324 (363)
T cd03786 257 HPNVLLISP----LGYLYFLLLLKN-ADLVLTDSG----GI-QEEASFLGVPVLNLRDRTERPETVESG-TNVLVG-TDP 324 (363)
T ss_pred CCCEEEECC----cCHHHHHHHHHc-CcEEEEcCc----cH-HhhhhhcCCCEEeeCCCCccchhhhee-eEEecC-CCH
Confidence 679999984 335678888876 999999984 44 7999999999999975 4455666443 233332 368
Q ss_pred HHHHHHHHHHHHHhhcCHHHHHHHH
Q 002909 721 DESSNKIADFFEKCKTDAGYWNQMS 745 (867)
Q Consensus 721 e~lA~aI~~ll~~~~~dp~~~~~m~ 745 (867)
++++++|.+++ +|+..+.+|.
T Consensus 325 ~~i~~~i~~ll----~~~~~~~~~~ 345 (363)
T cd03786 325 EAILAAIEKLL----SDEFAYSLMS 345 (363)
T ss_pred HHHHHHHHHHh----cCchhhhcCC
Confidence 99999998888 7877766653
No 93
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.72 E-value=2.1e-16 Score=192.61 Aligned_cols=318 Identities=13% Similarity=0.091 Sum_probs=214.0
Q ss_pred HHHHHHHHHcCCCCeEEEECCCChHHHHHHHHHh-cCCcEEEEEcCCcccccccchhhhhhcCccccchhhhhHHHHHHh
Q 002909 397 DATAKILDLMEGKPDLIIGNYSDGNLVASLMASK-LGITQATIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMN 475 (867)
Q Consensus 397 ~~~~~i~~~l~~kPDIIh~h~~~~~l~a~lla~~-~gip~V~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~ 475 (867)
.+...+.+.. ..-|+|-.|.+...+++.++.++ ...++.+..|..++..-.+.-+.| ...-+..|-
T Consensus 220 ~FA~~i~~~~-~~gD~VWVHDYHL~LlP~~LR~~~p~~~IGfFlHiPFPs~Eifr~LP~------------r~elL~glL 286 (934)
T PLN03064 220 MFADVVNEHY-EEGDVVWCHDYHLMFLPKCLKEYNSNMKVGWFLHTPFPSSEIHRTLPS------------RSELLRSVL 286 (934)
T ss_pred HHHHHHHHhc-CCCCEEEEecchhhHHHHHHHHhCCCCcEEEEecCCCCChHHHhhCCc------------HHHHHHHHh
Confidence 3444444443 23489999998888888888775 457888999987665432222222 111223788
Q ss_pred cCCEEEecCHHHHhhcCCCCCccccccccccccceeeeccCCCCC--CcEEEeCCCCCCCCCCCCchH---hhhhccCCc
Q 002909 476 QTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFD--PKFNIAAPGADQSVYFPYTEK---QKRLTSFHP 550 (867)
Q Consensus 476 ~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~--~ki~VIpnGVD~~~f~p~~~~---~~r~~~~~~ 550 (867)
.||.|-..|+..+..+-....... ++-....||.... -++.+.|-|||.+.|...... ..+...+
T Consensus 287 ~aDlIGFqT~~y~rhFl~~c~rlL--------g~~~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~l-- 356 (934)
T PLN03064 287 AADLVGFHTYDYARHFVSACTRIL--------GLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKEL-- 356 (934)
T ss_pred cCCeEEeCCHHHHHHHHHHHHHHh--------CccccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHH--
Confidence 999999999877664333211100 0000111222111 146678999999887543211 1111110
Q ss_pred chHHhhhcccccccccccccCCCCcEEEEEeccCCcCChHHHHHHHHHhHccCCCe----EEEEEeCCCCCCCCCChHHH
Q 002909 551 DIEELLYSKEDNSEHIGYLADRKKPIIFSMARLDTVKNITGLTEWYGKNKRLRNMV----NLVVVAGFFDPSKSHDREEI 626 (867)
Q Consensus 551 ~i~~~l~~~~~~~~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~~v----~LvIVG~g~~~~~~~d~ee~ 626 (867)
++. -.++.+|++++|++..||+...++||.++.+.+|++ .|+-|.... ....++..
T Consensus 357 ------------r~~-----~~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~ps---r~~v~eY~ 416 (934)
T PLN03064 357 ------------KER-----FAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPT---RTDVPEYQ 416 (934)
T ss_pred ------------HHH-----hCCceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEEEcCCC---CCCcHHHH
Confidence 112 235779999999999999999999999987777764 344444321 11223444
Q ss_pred HHHHHHHHHHHHcCC-CCc-----EEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCC----CEEe
Q 002909 627 AEIKKMHTLIEKYQL-QGQ-----FRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGL----PTFA 696 (867)
Q Consensus 627 ~~~~~l~~li~~~~L-~~~-----V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~Gl----PVIa 696 (867)
.+..++.+++.+.+- -+. |.++. ..++.+++..+|+. ||||++||..|||+++..|||+|+. ++|.
T Consensus 417 ~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~---~~l~~eeL~AlY~~-ADV~lvTslrDGmNLva~Eyva~~~~~~GvLIL 492 (934)
T PLN03064 417 KLTSQVHEIVGRINGRFGTLTAVPIHHLD---RSLDFHALCALYAV-TDVALVTSLRDGMNLVSYEFVACQDSKKGVLIL 492 (934)
T ss_pred HHHHHHHHHHHHHhhhccCCCcceEEEec---cCCCHHHHHHHHHh-CCEEEeCccccccCchHHHHHHhhcCCCCCeEE
Confidence 445555555555431 112 33333 24778999999997 9999999999999999999999954 4455
Q ss_pred cCCCCccceeecCceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 002909 697 TNQGGPAEIIIDGVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKVLN 767 (867)
Q Consensus 697 t~~gG~~EiI~dg~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll~ 767 (867)
|..+|.++.+ +..+++++|.|.+++|++|.++++ .+++.+++..+++++++ ..+||...++.+++
T Consensus 493 SEfaGaa~~L--~~~AllVNP~D~~~vA~AI~~AL~---M~~~Er~~r~~~~~~~V-~~~d~~~Wa~~fl~ 557 (934)
T PLN03064 493 SEFAGAAQSL--GAGAILVNPWNITEVAASIAQALN---MPEEEREKRHRHNFMHV-TTHTAQEWAETFVS 557 (934)
T ss_pred eCCCchHHHh--CCceEEECCCCHHHHHHHHHHHHh---CCHHHHHHHHHHHHhhc-ccCCHHHHHHHHHH
Confidence 9999998888 556999999999999999999984 58999999999999998 78999999999776
No 94
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=99.65 E-value=1.4e-14 Score=169.78 Aligned_cols=168 Identities=10% Similarity=0.138 Sum_probs=145.9
Q ss_pred cEEEEEe--ccCCcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCC----------
Q 002909 575 PIIFSMA--RLDTVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQ---------- 642 (867)
Q Consensus 575 ~iIl~vG--RL~~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~---------- 642 (867)
..+++++ |+ +.|.++.+++++.++....|++.|.+.|-+.+ ....+.++++++++++.
T Consensus 320 ~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~L~~~gy~~~---------~~~~~~l~~~i~~~~~~~~~~~~~~~~ 389 (519)
T TIGR03713 320 ETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYELKILTYNND---------NDITQLLEDILEQINEEYNQDKNFFSL 389 (519)
T ss_pred ceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeEEEEEEecCc---------hhHHHHHHHHHHHHHhhhchhhhcccc
Confidence 3567777 99 99999999999999999999999999998853 02245666777777665
Q ss_pred -------------------CcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCCcc
Q 002909 643 -------------------GQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPA 703 (867)
Q Consensus 643 -------------------~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG~~ 703 (867)
++|.|.|.+. ..++.+.+.. +.++|.+|..|+|+ +++||++.|+|+| .-|+.
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~~v~f~gy~~----e~dl~~~~~~-arl~id~s~~eg~~-~~ieAiS~GiPqI---nyg~~ 460 (519)
T TIGR03713 390 SEQDENQPILQTDEEQKEKERIAFTTLTN----EEDLISALDK-LRLIIDLSKEPDLY-TQISGISAGIPQI---NKVET 460 (519)
T ss_pred chhhhhhhcccchhhcccccEEEEEecCC----HHHHHHHHhh-heEEEECCCCCChH-HHHHHHHcCCCee---ecCCc
Confidence 7999999654 2467888887 99999999999999 9999999999999 66789
Q ss_pred ceeecCceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 002909 704 EIIIDGVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKVLNM 768 (867)
Q Consensus 704 EiI~dg~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll~l 768 (867)
++|.|+.||+++ +|.++++++|..+| .+++.|++++..+.+.+ ++||-+.+.+++.++
T Consensus 461 ~~V~d~~NG~li--~d~~~l~~al~~~L----~~~~~wn~~~~~sy~~~-~~yS~~~i~~kW~~~ 518 (519)
T TIGR03713 461 DYVEHNKNGYII--DDISELLKALDYYL----DNLKNWNYSLAYSIKLI-DDYSSENIIERLNEL 518 (519)
T ss_pred eeeEcCCCcEEe--CCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH-HHhhHHHHHHHHHhh
Confidence 999999999999 59999999999999 89999999999999998 899999988887763
No 95
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=99.61 E-value=1.2e-14 Score=166.66 Aligned_cols=329 Identities=17% Similarity=0.177 Sum_probs=176.0
Q ss_pred CeEEEECCCChHHHHHHHHH-hcCCcEEEEEcCCccccccc---chh-------hhhhcCccccchhhhhHHHHHHhcCC
Q 002909 410 PDLIIGNYSDGNLVASLMAS-KLGITQATIAHALEKSKYED---SDA-------KWKELDPKYHFSCQFTADLIAMNQTD 478 (867)
Q Consensus 410 PDIIh~h~~~~~l~a~lla~-~~gip~V~t~H~l~~~~~~~---s~~-------~~~~~~~~y~f~~~~~~e~ial~~aD 478 (867)
.=|.|+|-|.++....++.+ ...|..|+|.|+.-..++.. .++ .+......+....++..|+-+...||
T Consensus 144 ~ViaHfHEWmaG~gll~lr~~~~~VaTvFTTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraaA~~Ad 223 (633)
T PF05693_consen 144 KVIAHFHEWMAGVGLLYLRKRKPDVATVFTTHATLLGRYLAANNKDFYNNLDKFNGDQEAGERNIYHKHSIERAAAHYAD 223 (633)
T ss_dssp EEEEEEESGGGTTHHHHHHHTT-SCEEEEEESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHHHHHHHSS
T ss_pred cEEEEechHhHhHHHHHHhccCCCeeEEEEecccchhhHhhcCCCcHHHHhhccCccccccCccchHHHHHHHHHHHhcC
Confidence 33568999987654444433 34677899999854333211 111 12333334444556677888999999
Q ss_pred EEEecCHHHHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhc
Q 002909 479 FIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYS 558 (867)
Q Consensus 479 ~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~ 558 (867)
...|+|+-.+...+..++ ...=.|+|||+|.+.|....+-......-+..|.+.+-.
T Consensus 224 vFTTVSeITa~Ea~~LL~-----------------------r~pDvV~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv~~ 280 (633)
T PF05693_consen 224 VFTTVSEITAKEAEHLLK-----------------------RKPDVVTPNGLNVDKFPALHEFQNLHAKAKEKIHEFVRG 280 (633)
T ss_dssp EEEESSHHHHHHHHHHHS-----------------------S--SEE----B-GGGTSSTTHHHHHHHHHHHHHHHHHHH
T ss_pred eeeehhhhHHHHHHHHhC-----------------------CCCCEEcCCCccccccccchHHHHHHHHHHHHHHHHHHH
Confidence 999999855543222111 222358899999887766554332111111223322211
Q ss_pred ccccccccccccCCCCcEEEEEeccC-CcCChHHHHHHHHHhHc----cCCC---eEEEEEeCCCCCCCCCChHH---HH
Q 002909 559 KEDNSEHIGYLADRKKPIIFSMARLD-TVKNITGLTEWYGKNKR----LRNM---VNLVVVAGFFDPSKSHDREE---IA 627 (867)
Q Consensus 559 ~~~~~~~lGll~~~~k~iIl~vGRL~-~~Kgid~LieA~~~l~~----~~~~---v~LvIVG~g~~~~~~~d~ee---~~ 627 (867)
. .-.++.+ ..++..+|++.||.+ +.||+|.+|||++++.. ...+ +-|+|+=.... +-..|. ++
T Consensus 281 ~--f~g~~df-d~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~---~~~ve~l~~~a 354 (633)
T PF05693_consen 281 H--FYGHYDF-DLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTN---SFNVESLKGQA 354 (633)
T ss_dssp H--STT---S--GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEE---EE-HHHHHHHH
T ss_pred H--hcccCCC-CccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccC---CcCHHHHhhHH
Confidence 0 0011122 123556788899998 68999999999999853 1222 33444433221 111111 10
Q ss_pred -------------------------------------------------------------------HHHHHHHHHHHcC
Q 002909 628 -------------------------------------------------------------------EIKKMHTLIEKYQ 640 (867)
Q Consensus 628 -------------------------------------------------------------------~~~~l~~li~~~~ 640 (867)
..+.+-..+++.+
T Consensus 355 ~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~irr~~ 434 (633)
T PF05693_consen 355 VTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNMIRRLG 434 (633)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHHHHhCC
Confidence 1122222333444
Q ss_pred C----CCc--EEEcccc---cCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCCccceeec---
Q 002909 641 L----QGQ--FRWIAAQ---TDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIID--- 708 (867)
Q Consensus 641 L----~~~--V~flG~~---~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG~~EiI~d--- 708 (867)
| .++ |.|++.- .|.+-+-+.+.++.. ||+.|+||+||+||.|.+|+.++|+|+|+|+..|+...+.+
T Consensus 435 L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~G-cdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~ 513 (633)
T PF05693_consen 435 LFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRG-CDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWMQEHIE 513 (633)
T ss_dssp ----TT-SEEEEE--S---TTSSSS-S-HHHHHHH-SSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHHHTTS-
T ss_pred CCCCCCCceEEEEeeccccCCCCCCCCCHHHHhcc-CceeeeccccccccCChHHHhhcCCceeeccchhHHHHHHHhhc
Confidence 3 233 4455422 122333456677775 99999999999999999999999999999999987655432
Q ss_pred --CceEEEe---CCCCHHHHHHHHHHHHHH-hhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 002909 709 --GVSGFHI---DPNNGDESSNKIADFFEK-CKTDAGYWNQMSAAGRQRIYECYTWKIYANKVLNMG 769 (867)
Q Consensus 709 --g~~G~lv---~p~d~e~lA~aI~~ll~~-~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll~ly 769 (867)
...|+.| ...+.++.++.|.+.+.. |..++..+..+..++. ++.+..+|+.....|.+.|
T Consensus 514 ~~~~~GV~VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae-~LS~~~dW~~~~~yY~~Ay 579 (633)
T PF05693_consen 514 DPEEYGVYVVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAE-RLSDLADWKNFGKYYEKAY 579 (633)
T ss_dssp HHGGGTEEEE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHH-HHGGGGBHHHHCHHHHHHH
T ss_pred cCcCCcEEEEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH-HHHHhCCHHHHHHHHHHHH
Confidence 3456654 345677777777776643 3456666777776665 4558999999999888843
No 96
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.59 E-value=1.6e-13 Score=156.15 Aligned_cols=249 Identities=13% Similarity=0.094 Sum_probs=152.8
Q ss_pred CCCeEEEECCCCh-HHHHHHHHHhcCCcEEEEEcCCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHH
Q 002909 408 GKPDLIIGNYSDG-NLVASLMASKLGITQATIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQ 486 (867)
Q Consensus 408 ~kPDIIh~h~~~~-~l~a~lla~~~gip~V~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~ 486 (867)
.+||+|+++...+ ++.....++.+|+|+++.+. +.. ..|.... -+...+.+|.|+++++.
T Consensus 88 ~kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i~---P~~-----waw~~~~-----------~r~l~~~~d~v~~~~~~ 148 (385)
T TIGR00215 88 AKPDLLVGIDAPDFNLTKELKKKDPGIKIIYYIS---PQV-----WAWRKWR-----------AKKIEKATDFLLAILPF 148 (385)
T ss_pred cCCCEEEEeCCCCccHHHHHHHhhCCCCEEEEeC---CcH-----hhcCcch-----------HHHHHHHHhHhhccCCC
Confidence 4999999886533 55555678889999985441 111 1121110 12245789999999976
Q ss_pred HHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCC-CchHhhhhccCCcchHHhhhcccccccc
Q 002909 487 EIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFP-YTEKQKRLTSFHPDIEELLYSKEDNSEH 565 (867)
Q Consensus 487 ~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p-~~~~~~r~~~~~~~i~~~l~~~~~~~~~ 565 (867)
+.+..++ .| .+..++.|++-.+.... ...... ++.
T Consensus 149 e~~~~~~--------------------~g-----~~~~~vGnPv~~~~~~~~~~~~~~-------------------r~~ 184 (385)
T TIGR00215 149 EKAFYQK--------------------KN-----VPCRFVGHPLLDAIPLYKPDRKSA-------------------REK 184 (385)
T ss_pred cHHHHHh--------------------cC-----CCEEEECCchhhhccccCCCHHHH-------------------HHH
Confidence 6542110 11 24556767663222110 111111 144
Q ss_pred cccccCCCCcEEEEEe--ccCC-cCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCC
Q 002909 566 IGYLADRKKPIIFSMA--RLDT-VKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQ 642 (867)
Q Consensus 566 lGll~~~~k~iIl~vG--RL~~-~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~ 642 (867)
+|+ ++++++|+.+| |..+ .|++..+++++..+.+..+++++++++.... ..+.++++.++++..
T Consensus 185 lgl--~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~-----------~~~~~~~~~~~~~~~ 251 (385)
T TIGR00215 185 LGI--DHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFK-----------RRLQFEQIKAEYGPD 251 (385)
T ss_pred cCC--CCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCch-----------hHHHHHHHHHHhCCC
Confidence 676 66777776653 7766 7899999999999988778898877654422 134455666667666
Q ss_pred CcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCC-----------------ccce
Q 002909 643 GQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG-----------------PAEI 705 (867)
Q Consensus 643 ~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG-----------------~~Ei 705 (867)
.+|.+.+. +...+|+. ||++|.+| |.+.+|||+||+|+|.+.-.. .+.+
T Consensus 252 ~~v~~~~~--------~~~~~l~a-ADl~V~~S-----Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~ni 317 (385)
T TIGR00215 252 LQLHLIDG--------DARKAMFA-ADAALLAS-----GTAALEAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNI 317 (385)
T ss_pred CcEEEECc--------hHHHHHHh-CCEEeecC-----CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHH
Confidence 67776652 34556665 99999998 788889999999999873211 2222
Q ss_pred eecCceEEE-e-CCCCHHHHHHHHHHHHHHhhcCH----HHHHHHHHHHHH
Q 002909 706 IIDGVSGFH-I-DPNNGDESSNKIADFFEKCKTDA----GYWNQMSAAGRQ 750 (867)
Q Consensus 706 I~dg~~G~l-v-~p~d~e~lA~aI~~ll~~~~~dp----~~~~~m~~~ar~ 750 (867)
+.+....-- + +.-+++.+++.+.+++ .|+ +.++++.+.-.+
T Consensus 318 l~~~~~~pel~q~~~~~~~l~~~~~~ll----~~~~~~~~~~~~~~~~~~~ 364 (385)
T TIGR00215 318 LANRLLVPELLQEECTPHPLAIALLLLL----ENGLKAYKEMHRERQFFEE 364 (385)
T ss_pred hcCCccchhhcCCCCCHHHHHHHHHHHh----cCCcccHHHHHHHHHHHHH
Confidence 222111111 1 2346788888888887 888 777776655443
No 97
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=99.57 E-value=8.5e-15 Score=140.64 Aligned_cols=130 Identities=22% Similarity=0.295 Sum_probs=97.1
Q ss_pred CcEEEEEeccCCcCChHHHHH-HHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEccccc
Q 002909 574 KPIIFSMARLDTVKNITGLTE-WYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQT 652 (867)
Q Consensus 574 k~iIl~vGRL~~~Kgid~Lie-A~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~ 652 (867)
-++|+++|++.+.||++.+++ ++.++.+..|+++|+|+|++++ +++++ ..++|+|+|+.
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~~~--------------~l~~~-----~~~~v~~~g~~- 61 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNGPD--------------ELKRL-----RRPNVRFHGFV- 61 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECESS---------------HHCCH-----HHCTEEEE-S--
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCCHH--------------HHHHh-----cCCCEEEcCCH-
Confidence 357999999999999999999 9999998889999999999754 13333 23699999963
Q ss_pred CCCChHHHHHHHHccCcEEEEcCC-CCCCCHHHHHHHHcCCCEEecCCCCccceeecCceEEEeCCCCHHHHHHHHHHHH
Q 002909 653 DRYRNGELYRCIADTKGAFVQPAL-YEAFGLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDPNNGDESSNKIADFF 731 (867)
Q Consensus 653 d~v~~~el~~~la~~aDvfV~PS~-~EgfGltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~p~d~e~lA~aI~~ll 731 (867)
+++..+++. +|+++.|+. .++++.+++|||++|+|||+++. +..+++.....|+++ ++|+++++++|.+++
T Consensus 62 -----~e~~~~l~~-~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~~-~~~~~~l~~~i~~l~ 133 (135)
T PF13692_consen 62 -----EELPEILAA-ADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVLV-ANDPEELAEAIERLL 133 (135)
T ss_dssp -----HHHHHHHHC--SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE--TT-HHHHHHHHHHHH
T ss_pred -----HHHHHHHHh-CCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEEE-CCCHHHHHHHHHHHh
Confidence 488999997 999999986 78899999999999999999998 667777666678887 889999999999887
No 98
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.54 E-value=1.4e-11 Score=131.55 Aligned_cols=377 Identities=14% Similarity=0.123 Sum_probs=226.3
Q ss_pred HHHHHHCCCceeeccEEEecCCCCCCCCCCCCccccccCCCCeEEEEccCCCcccccccccccccchhhHHHHHHHHHHH
Q 002909 322 LLRIKQQGLSVKPQILVVTRLIPNSKGTKCSQELEPIYDTKHSHILRIPFKTEQAILPQWVSRFDIYPYLGRFAQDATAK 401 (867)
Q Consensus 322 a~~L~~~GheV~~~V~VvT~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~l~~~isr~~i~p~l~~f~~~~~~~ 401 (867)
|.-|++.|++|+ ++.-.. ..+.+.+-..++++|+.+|--+......+.+ +-...-+-+|..-+...
T Consensus 33 A~Sla~~gf~Vd----liGy~~--------s~p~e~l~~hprI~ih~m~~l~~~~~~p~~~--~l~lKvf~Qfl~Ll~aL 98 (444)
T KOG2941|consen 33 ALSLAKLGFQVD----LIGYVE--------SIPLEELLNHPRIRIHGMPNLPFLQGGPRVL--FLPLKVFWQFLSLLWAL 98 (444)
T ss_pred HHHHHHcCCeEE----EEEecC--------CCChHHHhcCCceEEEeCCCCcccCCCchhh--hhHHHHHHHHHHHHHHH
Confidence 446788999999 665421 1244555557788998877543221111100 00011111222111111
Q ss_pred HHHHcCCCCeEEEECCCCh---HHHHHHHHHhcCCcEEEEEcCCccc-ccccchhhhhhcCccccchhhhhHHHHHHhcC
Q 002909 402 ILDLMEGKPDLIIGNYSDG---NLVASLMASKLGITQATIAHALEKS-KYEDSDAKWKELDPKYHFSCQFTADLIAMNQT 477 (867)
Q Consensus 402 i~~~l~~kPDIIh~h~~~~---~l~a~lla~~~gip~V~t~H~l~~~-~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~a 477 (867)
+. .+.+|+|....+.+ -.++.+++...|.++++..|++... ....+ ....... ..+....|.+.-+.|
T Consensus 99 ~~---~~~~~~ilvQNPP~iPtliv~~~~~~l~~~KfiIDWHNy~Ysl~l~~~---~g~~h~l--V~l~~~~E~~fgk~a 170 (444)
T KOG2941|consen 99 FV---LRPPDIILVQNPPSIPTLIVCVLYSILTGAKFIIDWHNYGYSLQLKLK---LGFQHPL--VRLVRWLEKYFGKLA 170 (444)
T ss_pred Hh---ccCCcEEEEeCCCCCchHHHHHHHHHHhcceEEEEehhhHHHHHHHhh---cCCCCch--HHHHHHHHHHhhccc
Confidence 11 36899998776543 3466677788899999999987664 11110 0000000 122223455566789
Q ss_pred CEEEecCHHHHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCC-----CCCCCC----CCCCchH----hhh
Q 002909 478 DFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAP-----GADQSV----YFPYTEK----QKR 544 (867)
Q Consensus 478 D~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpn-----GVD~~~----f~p~~~~----~~r 544 (867)
|.-.|+|..+.+...+.+|-- +..|++. +.+++. |-+.... ..|
T Consensus 171 ~~nLcVT~AMr~dL~qnWgi~-----------------------ra~v~YDrPps~~~~l~~~H~lf~~l~~d~~~f~ar 227 (444)
T KOG2941|consen 171 DYNLCVTKAMREDLIQNWGIN-----------------------RAKVLYDRPPSKPTPLDEQHELFMKLAGDHSPFRAR 227 (444)
T ss_pred ccchhhHHHHHHHHHHhcCCc-----------------------eeEEEecCCCCCCCchhHHHHHHhhhccccchhhhc
Confidence 999999998877555544411 1111111 111111 1111110 001
Q ss_pred hccCCcchHHhhhcccccccccccccCCCCcEEEEEeccCCcCChHHHHHHHHHhH-----c--cCCCeEEEEEeCCCCC
Q 002909 545 LTSFHPDIEELLYSKEDNSEHIGYLADRKKPIIFSMARLDTVKNITGLTEWYGKNK-----R--LRNMVNLVVVAGFFDP 617 (867)
Q Consensus 545 ~~~~~~~i~~~l~~~~~~~~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~-----~--~~~~v~LvIVG~g~~~ 617 (867)
.......+..+|.+.+.....-. ......++++.....+..++..|++|+..-. + ..|.+-++|.|.||.
T Consensus 228 -~~q~~~~~~taf~~k~~s~~v~~-~~~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGPl- 304 (444)
T KOG2941|consen 228 -EPQDKALERTAFTKKDASGDVQL-LPERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGPL- 304 (444)
T ss_pred -ccccchhhhhhHhhhcccchhhh-ccCCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCch-
Confidence 00011222233333222111111 1233345677778999999999999998432 1 235677788888876
Q ss_pred CCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccccCCCChHHHHHHHHccCcEEEE--cCC-CCCCCHHHHHHHHcCCCE
Q 002909 618 SKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQ--PAL-YEAFGLTVIEAMNCGLPT 694 (867)
Q Consensus 618 ~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~--PS~-~EgfGltvlEAMa~GlPV 694 (867)
.++..+.++++++ .+|.+.-. -...++...+++. ||+.|+ +|. .=-.|++++....||+||
T Consensus 305 -----------kE~Y~~~I~~~~~-~~v~~~tp---WL~aEDYP~ll~s-aDlGVcLHtSSSGLDLPMKVVDMFGcglPv 368 (444)
T KOG2941|consen 305 -----------KEKYSQEIHEKNL-QHVQVCTP---WLEAEDYPKLLAS-ADLGVCLHTSSSGLDLPMKVVDMFGCGLPV 368 (444)
T ss_pred -----------hHHHHHHHHHhcc-cceeeeec---ccccccchhHhhc-cccceEeeecCcccCcchhHHHhhcCCCce
Confidence 6777888999887 45655432 1223455555554 887665 332 334789999999999999
Q ss_pred EecCCCCccceeecCceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 002909 695 FATNQGGPAEIIIDGVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKVL 766 (867)
Q Consensus 695 Iat~~gG~~EiI~dg~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll 766 (867)
+|-+..-+.|+|+|++||++|+ |.+++|+.+.-+++.+-+|.+...++.++.++. +.+.|+..-++..
T Consensus 369 cA~~fkcl~ELVkh~eNGlvF~--Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~--~e~RW~~~W~~~~ 436 (444)
T KOG2941|consen 369 CAVNFKCLDELVKHGENGLVFE--DSEELAEQLQMLFKNFPDNADELNQLKKNLREE--QELRWDESWERTA 436 (444)
T ss_pred eeecchhHHHHHhcCCCceEec--cHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHHH--HhhhHHHHHHHhh
Confidence 9999999999999999999998 999999999999977777999999999999887 5778886555443
No 99
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=99.37 E-value=1.4e-11 Score=142.56 Aligned_cols=322 Identities=16% Similarity=0.143 Sum_probs=180.9
Q ss_pred HHHHHHHHHcCCCCeEEEECCCChHHHHHHHHHh-cCCcEEEEEcCCcccccccchhhhhhcCccccchhhhhHHHHHHh
Q 002909 397 DATAKILDLMEGKPDLIIGNYSDGNLVASLMASK-LGITQATIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMN 475 (867)
Q Consensus 397 ~~~~~i~~~l~~kPDIIh~h~~~~~l~a~lla~~-~gip~V~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~ 475 (867)
.++..+.+.. ..-|+|-.|.....+++.++.++ .+.++.+..|..++..-.+..+.|. ..-+..|-
T Consensus 130 ~FA~~i~~~~-~~~D~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~e~fr~lP~r------------~eiL~glL 196 (474)
T PF00982_consen 130 RFADAIAEVY-RPGDLVWVHDYHLMLLPQMLRERGPDARIGFFLHIPFPSSEIFRCLPWR------------EEILRGLL 196 (474)
T ss_dssp HHHHHHGGG---TT-EEEEESGGGTTHHHHHHHTT--SEEEEEE-S----HHHHTTSTTH------------HHHHHHHT
T ss_pred HHHHHHHHhC-cCCCEEEEeCCcHHHHHHHHHhhcCCceEeeEEecCCCCHHHHhhCCcH------------HHHHHHhh
Confidence 3444444443 35689999988887888888776 4678889999876554222222111 11123788
Q ss_pred cCCEEEecCHHHHhhcCCCCCccccccccccccceeeec--cCCCC--CCcEEEeCCCCCCCCCCCCchHhhhhccCCcc
Q 002909 476 QTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVS--GINVF--DPKFNIAAPGADQSVYFPYTEKQKRLTSFHPD 551 (867)
Q Consensus 476 ~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~--GI~~~--~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~ 551 (867)
.||.|-..++..+..+-...... + ++-.... ++... .-++.+.|-|||.+.|........ ....
T Consensus 197 ~aDlIgFqt~~~~~nFl~~~~r~-------l-g~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~~~----v~~~ 264 (474)
T PF00982_consen 197 GADLIGFQTFEYARNFLSCCKRL-------L-GLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARSPE----VQER 264 (474)
T ss_dssp TSSEEEESSHHHHHHHHHHHHHH-------S--EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-S-------HH
T ss_pred cCCEEEEecHHHHHHHHHHHHHH-------c-CCcccCCCceEEECCEEEEEEEeeccCChHHHHhhccChH----HHHH
Confidence 99999999987766432221111 0 0000000 11111 124778899999876633211100 0000
Q ss_pred hHHhhhcccccccccccccCCCCcEEEEEeccCCcCChHHHHHHHHHhHccCC----CeEEEEEeCCCCCCCCCChHHHH
Q 002909 552 IEELLYSKEDNSEHIGYLADRKKPIIFSMARLDTVKNITGLTEWYGKNKRLRN----MVNLVVVAGFFDPSKSHDREEIA 627 (867)
Q Consensus 552 i~~~l~~~~~~~~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~----~v~LvIVG~g~~~~~~~d~ee~~ 627 (867)
++++ ++.+ ..+..+|+.+.|++..||+..=+.||.++.+.+| ++.|+-++.... ....+..+
T Consensus 265 ~~~l-------~~~~----~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~psr---~~~~~y~~ 330 (474)
T PF00982_consen 265 AEEL-------REKF----KGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVPSR---EDVPEYQE 330 (474)
T ss_dssp HHHH-------HHHT----TT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B-S---TTSHHHHH
T ss_pred HHHH-------HHhc----CCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeeccC---ccchhHHH
Confidence 0000 0111 1234899999999999999999999999876554 577887776433 34445556
Q ss_pred HHHHHHHHHHH----cCCCC--cEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCC----EEec
Q 002909 628 EIKKMHTLIEK----YQLQG--QFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLP----TFAT 697 (867)
Q Consensus 628 ~~~~l~~li~~----~~L~~--~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlP----VIat 697 (867)
+.+++.+++.+ +|-.+ -|.++.. .++.++++.++.. ||+++.+|..+|..++..|+.+|..+ +|.|
T Consensus 331 ~~~~v~~~v~~IN~~~g~~~~~PI~~~~~---~~~~~~~~aly~~-aDv~lvTslrDGmNLva~Eyva~q~~~~GvLiLS 406 (474)
T PF00982_consen 331 LRREVEELVGRINGKYGTPDWTPIIYIYR---SLSFEELLALYRA-ADVALVTSLRDGMNLVAKEYVACQDDNPGVLILS 406 (474)
T ss_dssp HHHHHHHHHHHHHHHH-BTTB-SEEEE-S------HHHHHHHHHH--SEEEE--SSBS--HHHHHHHHHS-TS--EEEEE
T ss_pred HHHHHHHHHHHHHhhcccCCceeEEEEec---CCCHHHHHHHHHh-hhhEEecchhhccCCcceEEEEEecCCCCceEee
Confidence 66666666664 33222 3555543 4678999999997 99999999999999999999999766 7778
Q ss_pred CCCCccceeecCceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 002909 698 NQGGPAEIIIDGVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKVLN 767 (867)
Q Consensus 698 ~~gG~~EiI~dg~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll~ 767 (867)
...|.++.+.+ ..++++|.|.+++|++|.++++ .+++.++..-+..++.+ ..+|....++.+++
T Consensus 407 efaGaa~~L~~--~al~VNP~d~~~~A~ai~~AL~---M~~~Er~~r~~~~~~~v-~~~~~~~W~~~~l~ 470 (474)
T PF00982_consen 407 EFAGAAEQLSE--AALLVNPWDIEEVADAIHEALT---MPPEERKERHARLREYV-REHDVQWWAESFLR 470 (474)
T ss_dssp TTBGGGGT-TT--S-EEE-TT-HHHHHHHHHHHHT-----HHHHHHHHHHHHHHH-HHT-HHHHHHHHHH
T ss_pred ccCCHHHHcCC--ccEEECCCChHHHHHHHHHHHc---CCHHHHHHHHHHHHHHh-HhCCHHHHHHHHHH
Confidence 88888888843 3589999999999999999985 56777777777777777 78888888887776
No 100
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=99.33 E-value=8e-11 Score=135.08 Aligned_cols=322 Identities=13% Similarity=0.059 Sum_probs=210.8
Q ss_pred HHHHHHHHcCCCCeEEEECCCChHHHHHHHHHh-cCCcEEEEEcCCcccccccchhhhhhcCccccchhhhhHHHHHHhc
Q 002909 398 ATAKILDLMEGKPDLIIGNYSDGNLVASLMASK-LGITQATIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQ 476 (867)
Q Consensus 398 ~~~~i~~~l~~kPDIIh~h~~~~~l~a~lla~~-~gip~V~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~ 476 (867)
+...+.+.. ..-|+|-.|.....+++..+.++ ...++.+..|..++..-.+..+.|. ..-+..|-.
T Consensus 113 FA~~v~~~~-~~~D~VWVHDYhL~llp~~LR~~~~~~~IgFFlHiPFPs~eifr~LP~r------------~eil~glL~ 179 (474)
T PRK10117 113 LADKLLPLL-KDDDIIWIHDYHLLPFASELRKRGVNNRIGFFLHIPFPTPEIFNALPPH------------DELLEQLCD 179 (474)
T ss_pred HHHHHHHhc-CCCCEEEEeccHhhHHHHHHHHhCCCCcEEEEEeCCCCChHHHhhCCCh------------HHHHHHHHh
Confidence 344444443 23489999998887888888665 4567888899866554222222221 111237788
Q ss_pred CCEEEecCHHHHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchH--hhhhccCCcchHH
Q 002909 477 TDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEK--QKRLTSFHPDIEE 554 (867)
Q Consensus 477 aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~--~~r~~~~~~~i~~ 554 (867)
+|.|-..|+..+..+-+.+...... -...+......|= .-++.+.|-|||.+.|...... ..+...
T Consensus 180 aDlIGFqt~~y~rnFl~~~~~~lg~--~~~~~~~v~~~gr---~v~v~~~PigID~~~~~~~a~~~~~~~~~~------- 247 (474)
T PRK10117 180 YDLLGFQTENDRLAFLDCLSNLTRV--TTRSGKSHTAWGK---AFRTEVYPIGIEPDEIAKQAAGPLPPKLAQ------- 247 (474)
T ss_pred CccceeCCHHHHHHHHHHHHHHcCC--cccCCCeEEECCe---EEEEEEEECeEcHHHHHHHhhchHHHHHHH-------
Confidence 9999999987765433322111000 0000000000110 2257788999998776432211 111100
Q ss_pred hhhcccccccccccccCCCCcEEEEEeccCCcCChHHHHHHHHHhHccCC----CeEEEEEeCCCCCCCCCChHHHHHHH
Q 002909 555 LLYSKEDNSEHIGYLADRKKPIIFSMARLDTVKNITGLTEWYGKNKRLRN----MVNLVVVAGFFDPSKSHDREEIAEIK 630 (867)
Q Consensus 555 ~l~~~~~~~~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~----~v~LvIVG~g~~~~~~~d~ee~~~~~ 630 (867)
.++.+ .++.+|+.+.|+|..||+..=++||.++.+.+| ++.|+-++.. ....-.+......
T Consensus 248 -------lr~~~-----~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~p---sR~~v~~Y~~l~~ 312 (474)
T PRK10117 248 -------LKAEL-----KNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPT---SRGDVQAYQDIRH 312 (474)
T ss_pred -------HHHHc-----CCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCC---CCCccHHHHHHHH
Confidence 01111 357799999999999999999999999877665 4677777643 2334455566666
Q ss_pred HHHHHHHHcCC-CCcEEEcc--cccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCC-----CEEecCCCCc
Q 002909 631 KMHTLIEKYQL-QGQFRWIA--AQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGL-----PTFATNQGGP 702 (867)
Q Consensus 631 ~l~~li~~~~L-~~~V~flG--~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~Gl-----PVIat~~gG~ 702 (867)
++.+++.+.+- -+.+.|.+ +....++.+++..+|.. |||++.++.-+|+.|+..|+.+|-. ..|.|...|.
T Consensus 313 ~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~-ADv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSefAGa 391 (474)
T PRK10117 313 QLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRY-SDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGA 391 (474)
T ss_pred HHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHh-ccEEEecccccccccccchheeeecCCCCccEEEecccch
Confidence 77777665431 12211221 22235778999999997 9999999999999999999999975 3788999888
Q ss_pred cceeecCceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 002909 703 AEIIIDGVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKVLN 767 (867)
Q Consensus 703 ~EiI~dg~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll~ 767 (867)
++.+. ..++++|.|.+++|++|.++++ .+++.+++--+..++.+ ..+|....++.+++
T Consensus 392 A~~L~---~AllVNP~d~~~~A~Ai~~AL~---Mp~~Er~~R~~~l~~~v-~~~dv~~W~~~fL~ 449 (474)
T PRK10117 392 ANELT---SALIVNPYDRDEVAAALDRALT---MPLAERISRHAEMLDVI-VKNDINHWQECFIS 449 (474)
T ss_pred HHHhC---CCeEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHh-hhCCHHHHHHHHHH
Confidence 88883 3789999999999999999985 66777776666677766 77888877777776
No 101
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=99.33 E-value=6.4e-12 Score=113.25 Aligned_cols=92 Identities=23% Similarity=0.432 Sum_probs=86.4
Q ss_pred EEEEcCCCCCCCHHHHHHHHcCCCEEecCCCCccceeecCceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHH
Q 002909 670 AFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGR 749 (867)
Q Consensus 670 vfV~PS~~EgfGltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar 749 (867)
+++.|+..++++..++|+||||+|||+++.++..+++.+|..++.++ |++++.++|..++ .||+.+++++++|+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~ll----~~~~~~~~ia~~a~ 74 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYLL----ENPEERRRIAKNAR 74 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHHH----CCHHHHHHHHHHHH
Confidence 46778889999999999999999999999999999999999999998 9999999998888 89999999999999
Q ss_pred HHHHHhCCHHHHHHHHHH
Q 002909 750 QRIYECYTWKIYANKVLN 767 (867)
Q Consensus 750 ~~v~~~ysw~~~a~~ll~ 767 (867)
+++.++|||+..++++++
T Consensus 75 ~~v~~~~t~~~~~~~il~ 92 (92)
T PF13524_consen 75 ERVLKRHTWEHRAEQILE 92 (92)
T ss_pred HHHHHhCCHHHHHHHHHC
Confidence 999999999999998863
No 102
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.32 E-value=1.2e-09 Score=122.92 Aligned_cols=303 Identities=15% Similarity=0.128 Sum_probs=162.3
Q ss_pred cccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCCCCCCCCCCCCccccccCCCCeEEEEccCCCccccccccc
Q 002909 303 TGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLIPNSKGTKCSQELEPIYDTKHSHILRIPFKTEQAILPQWV 382 (867)
Q Consensus 303 tGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~l~~~i 382 (867)
|||-..-.+ .++++|.++||+|. ++++.. | ...+. ++ ..++.+..++....
T Consensus 11 TGGHi~Pal--------a~a~~l~~~g~~v~----~vg~~~----~--~e~~l--~~-~~g~~~~~~~~~~l-------- 61 (352)
T PRK12446 11 SAGHVTPNL--------AIIPYLKEDNWDIS----YIGSHQ----G--IEKTI--IE-KENIPYYSISSGKL-------- 61 (352)
T ss_pred cHHHHHHHH--------HHHHHHHhCCCEEE----EEECCC----c--ccccc--Cc-ccCCcEEEEeccCc--------
Confidence 899877777 45667777999999 887631 1 11111 11 11344444443221
Q ss_pred ccccchhhHH---HHHHHHHHHHHHHcCCCCeEEEECCCChHHHHHHHHHhcCCcEEEEEcCCcccccccchhhhhhcCc
Q 002909 383 SRFDIYPYLG---RFAQDATAKILDLMEGKPDLIIGNYSDGNLVASLMASKLGITQATIAHALEKSKYEDSDAKWKELDP 459 (867)
Q Consensus 383 sr~~i~p~l~---~f~~~~~~~i~~~l~~kPDIIh~h~~~~~l~a~lla~~~gip~V~t~H~l~~~~~~~s~~~~~~~~~ 459 (867)
++...+..+. .+.....+...-....+||+||++....+..+.++++.+++|+++.-.+... +
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~n~~~------g-------- 127 (352)
T PRK12446 62 RRYFDLKNIKDPFLVMKGVMDAYVRIRKLKPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESDMTP------G-------- 127 (352)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCchhhHHHHHHHHHcCCCEEEECCCCCc------c--------
Confidence 1110111111 1122222211111135999999987766677788899999998643322111 0
Q ss_pred cccchhhhhHHHHHHhcCCEEEecCHHHHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCc
Q 002909 460 KYHFSCQFTADLIAMNQTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYT 539 (867)
Q Consensus 460 ~y~f~~~~~~e~ial~~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~ 539 (867)
.+.++....+|.|.+.-+...+ +++ .+++.++-|.|..+...+..
T Consensus 128 --------~~nr~~~~~a~~v~~~f~~~~~-------------------------~~~--~~k~~~tG~Pvr~~~~~~~~ 172 (352)
T PRK12446 128 --------LANKIALRFASKIFVTFEEAAK-------------------------HLP--KEKVIYTGSPVREEVLKGNR 172 (352)
T ss_pred --------HHHHHHHHhhCEEEEEccchhh-------------------------hCC--CCCeEEECCcCCcccccccc
Confidence 0123356778887765432211 112 35677777777654332211
Q ss_pred hHhhhhccCCcchHHhhhcccccccccccccCCCCcEEEEEe-ccCCcCChHH-HHHHHHHhHccCCCeEEEEEeCCCCC
Q 002909 540 EKQKRLTSFHPDIEELLYSKEDNSEHIGYLADRKKPIIFSMA-RLDTVKNITG-LTEWYGKNKRLRNMVNLVVVAGFFDP 617 (867)
Q Consensus 540 ~~~~r~~~~~~~i~~~l~~~~~~~~~lGll~~~~k~iIl~vG-RL~~~Kgid~-LieA~~~l~~~~~~v~LvIVG~g~~~ 617 (867)
.. . ++.+|+ ++++++|+.+| ... -+.+.. +.+++..+. .+++++++.|..+
T Consensus 173 ~~-~-------------------~~~~~l--~~~~~~iLv~GGS~G-a~~in~~~~~~l~~l~---~~~~vv~~~G~~~- 225 (352)
T PRK12446 173 EK-G-------------------LAFLGF--SRKKPVITIMGGSLG-AKKINETVREALPELL---LKYQIVHLCGKGN- 225 (352)
T ss_pred hH-H-------------------HHhcCC--CCCCcEEEEECCccc-hHHHHHHHHHHHHhhc---cCcEEEEEeCCch-
Confidence 11 1 133555 56677776665 444 344433 334444443 2477766655422
Q ss_pred CCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEec
Q 002909 618 SKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT 697 (867)
Q Consensus 618 ~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat 697 (867)
+.+....+ .++...++.. +++..+|+. ||++|.- +-+.++.|++++|+|.|..
T Consensus 226 --------------~~~~~~~~---~~~~~~~f~~-----~~m~~~~~~-adlvIsr----~G~~t~~E~~~~g~P~I~i 278 (352)
T PRK12446 226 --------------LDDSLQNK---EGYRQFEYVH-----GELPDILAI-TDFVISR----AGSNAIFEFLTLQKPMLLI 278 (352)
T ss_pred --------------HHHHHhhc---CCcEEecchh-----hhHHHHHHh-CCEEEEC----CChhHHHHHHHcCCCEEEE
Confidence 11111111 2334445432 256677776 9999875 3478999999999999988
Q ss_pred CCC-----C----ccceeecCceEEEeCCC--CHHHHHHHHHHHHHHhhcCHHHH
Q 002909 698 NQG-----G----PAEIIIDGVSGFHIDPN--NGDESSNKIADFFEKCKTDAGYW 741 (867)
Q Consensus 698 ~~g-----G----~~EiI~dg~~G~lv~p~--d~e~lA~aI~~ll~~~~~dp~~~ 741 (867)
... + .++.+.+...|..+... +++.+++++.+++ .|++.+
T Consensus 279 P~~~~~~~~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l~~~l~~ll----~~~~~~ 329 (352)
T PRK12446 279 PLSKFASRGDQILNAESFERQGYASVLYEEDVTVNSLIKHVEELS----HNNEKY 329 (352)
T ss_pred cCCCCCCCchHHHHHHHHHHCCCEEEcchhcCCHHHHHHHHHHHH----cCHHHH
Confidence 542 1 22334445556666433 4677888887776 787654
No 103
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=99.27 E-value=2.7e-11 Score=119.95 Aligned_cols=167 Identities=17% Similarity=0.157 Sum_probs=82.3
Q ss_pred CcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCCCCCCCCCCCCccccccCCCCeEEEEccCCCcccccccc
Q 002909 302 DTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLIPNSKGTKCSQELEPIYDTKHSHILRIPFKTEQAILPQW 381 (867)
Q Consensus 302 dtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~l~~~ 381 (867)
..||.++|+. +|+++|+++||+|+ |++....+.... . ........+....
T Consensus 10 ~~GG~e~~~~--------~l~~~l~~~G~~v~----v~~~~~~~~~~~-------~----~~~~~~~~~~~~~------- 59 (177)
T PF13439_consen 10 NIGGAERVVL--------NLARALAKRGHEVT----VVSPGVKDPIEE-------E----LVKIFVKIPYPIR------- 59 (177)
T ss_dssp SSSHHHHHHH--------HHHHHHHHTT-EEE----EEESS-TTS-SS-------T----EEEE---TT-SST-------
T ss_pred CCChHHHHHH--------HHHHHHHHCCCEEE----EEEcCCCccchh-------h----ccceeeeeecccc-------
Confidence 5899999999 56667888999999 888743221100 0 0111111111110
Q ss_pred cccccchhhHHHHHHHHHHHHHHHcCCCCeEEEECCCChHHHHHHHHHhcCCcEEEEEcCCcccccccchhhhhhcCccc
Q 002909 382 VSRFDIYPYLGRFAQDATAKILDLMEGKPDLIIGNYSDGNLVASLMASKLGITQATIAHALEKSKYEDSDAKWKELDPKY 461 (867)
Q Consensus 382 isr~~i~p~l~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~l~a~lla~~~gip~V~t~H~l~~~~~~~s~~~~~~~~~~y 461 (867)
....+...+...+.+.+.+. +|||||+|.+.....+.+... ++|.|.+.|+....... +......+
T Consensus 60 ----~~~~~~~~~~~~~~~~i~~~---~~DiVh~~~~~~~~~~~~~~~--~~~~v~~~H~~~~~~~~-----~~~~~~~~ 125 (177)
T PF13439_consen 60 ----KRFLRSFFFMRRLRRLIKKE---KPDIVHIHGPPAFWIALLACR--KVPIVYTIHGPYFERRF-----LKSKLSPY 125 (177)
T ss_dssp ----SS--HHHHHHHHHHHHHHHH---T-SEEECCTTHCCCHHHHHHH--CSCEEEEE-HHH--HHT-----TTTSCCCH
T ss_pred ----cccchhHHHHHHHHHHHHHc---CCCeEEecccchhHHHHHhcc--CCCEEEEeCCCcccccc-----cccccchh
Confidence 01111112233444555544 899999998654333333333 99999999986631000 00000000
Q ss_pred cchhhhhHHHHHHhcCCEEEecCHHHHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCC
Q 002909 462 HFSCQFTADLIAMNQTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVY 535 (867)
Q Consensus 462 ~f~~~~~~e~ial~~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f 535 (867)
..... .......+.+|.+|++|...++.+.+ .|++ ..++.|||||||.+.|
T Consensus 126 ~~~~~-~~~~~~~~~~~~ii~vS~~~~~~l~~--------------------~~~~--~~ki~vI~ngid~~~F 176 (177)
T PF13439_consen 126 SYLNF-RIERKLYKKADRIIAVSESTKDELIK--------------------FGIP--PEKIHVIYNGIDTDRF 176 (177)
T ss_dssp HHHHH-CTTHHHHCCSSEEEESSHHHHHHHHH--------------------HT----SS-EEE----B-CCCH
T ss_pred hhhhh-hhhhhHHhcCCEEEEECHHHHHHHHH--------------------hCCc--ccCCEEEECCccHHHc
Confidence 00000 01222468999999999987763322 2444 7899999999999876
No 104
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=99.26 E-value=1.1e-11 Score=120.64 Aligned_cols=160 Identities=18% Similarity=0.254 Sum_probs=83.9
Q ss_pred ccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCCCCCCCCCCCCccccccCCCCeEEEEccCCCcccccccccc
Q 002909 304 GGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLIPNSKGTKCSQELEPIYDTKHSHILRIPFKTEQAILPQWVS 383 (867)
Q Consensus 304 GG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~l~~~is 383 (867)
||.++|+. +|+++|.++||+|+ |+|...+.. ..+ ....++.+.++|+......
T Consensus 1 GG~~~~~~--------~l~~~L~~~G~~V~----v~~~~~~~~-------~~~--~~~~~~~~~~~~~~~~~~~------ 53 (160)
T PF13579_consen 1 GGIERYVR--------ELARALAARGHEVT----VVTPQPDPE-------DDE--EEEDGVRVHRLPLPRRPWP------ 53 (160)
T ss_dssp SHHHHHHH--------HHHHHHHHTT-EEE----EEEE---GG-------G-S--EEETTEEEEEE--S-SSSG------
T ss_pred CCHHHHHH--------HHHHHHHHCCCEEE----EEecCCCCc-------ccc--cccCCceEEeccCCccchh------
Confidence 89999999 56667888999999 998743221 111 1133788888886653210
Q ss_pred cccchhhHHHHHHHHHHHHHHHcCCCCeEEEECCCChHHHHHHHHHhcCCcEEEEEcCCcccccccchhhhhhcCccccc
Q 002909 384 RFDIYPYLGRFAQDATAKILDLMEGKPDLIIGNYSDGNLVASLMASKLGITQATIAHALEKSKYEDSDAKWKELDPKYHF 463 (867)
Q Consensus 384 r~~i~p~l~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~l~a~lla~~~gip~V~t~H~l~~~~~~~s~~~~~~~~~~y~f 463 (867)
...+. +...+.+.+ .....+||+||+|.+..++++.++++..++|+|++.|+...... ..|.. .
T Consensus 54 -~~~~~----~~~~~~~~l-~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~----~~~~~-----~- 117 (160)
T PF13579_consen 54 -LRLLR----FLRRLRRLL-AARRERPDVVHAHSPTAGLVAALARRRRGIPLVVTVHGTLFRRG----SRWKR-----R- 117 (160)
T ss_dssp -GGHCC----HHHHHHHHC-HHCT---SEEEEEHHHHHHHHHHHHHHHT--EEEE-SS-T----------HHH-----H-
T ss_pred -hhhHH----HHHHHHHHH-hhhccCCeEEEecccchhHHHHHHHHccCCcEEEEECCCchhhc----cchhh-----H-
Confidence 11111 122223333 22356999999999766667777766889999999998442221 01110 0
Q ss_pred hhhhhHHHHHHhcCCEEEecCHHHHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCC
Q 002909 464 SCQFTADLIAMNQTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPG 529 (867)
Q Consensus 464 ~~~~~~e~ial~~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnG 529 (867)
.....+...++.||.|+++|+..++.+.+ .|++ .+|+.|||||
T Consensus 118 -~~~~~~~~~~~~ad~vi~~S~~~~~~l~~--------------------~g~~--~~ri~vipnG 160 (160)
T PF13579_consen 118 -LYRWLERRLLRRADRVIVVSEAMRRYLRR--------------------YGVP--PDRIHVIPNG 160 (160)
T ss_dssp -HHHHHHHHHHHH-SEEEESSHHHHHHHHH--------------------H-----GGGEEE----
T ss_pred -HHHHHHHHHHhcCCEEEECCHHHHHHHHH--------------------hCCC--CCcEEEeCcC
Confidence 11123556889999999999988763221 3444 7899999998
No 105
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.25 E-value=1.1e-08 Score=114.88 Aligned_cols=239 Identities=14% Similarity=0.123 Sum_probs=149.2
Q ss_pred CCCeEEEECCCChHHHHHHHHHhcCCcEEEEEcCCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHHH
Q 002909 408 GKPDLIIGNYSDGNLVASLMASKLGITQATIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQE 487 (867)
Q Consensus 408 ~kPDIIh~h~~~~~l~a~lla~~~gip~V~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~~ 487 (867)
.+||+|++........+.++++.+|+|+++.-.+..... .|+ +..+.++.|.+.-+..
T Consensus 90 ~kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEqn~~~G~------ank----------------~~~~~a~~V~~~f~~~ 147 (357)
T COG0707 90 LKPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQNAVPGL------ANK----------------ILSKFAKKVASAFPKL 147 (357)
T ss_pred cCCCEEEecCCccccHHHHHHHhCCCCEEEEecCCCcch------hHH----------------HhHHhhceeeeccccc
Confidence 499999998776667788888999999986665533222 221 1334566554433210
Q ss_pred HhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccccccc
Q 002909 488 IAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHIG 567 (867)
Q Consensus 488 ~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~lG 567 (867)
..+++ +.++.++-|.+..+... ......+ ..+
T Consensus 148 -------------------------~~~~~--~~~~~~tG~Pvr~~~~~-~~~~~~~--------------------~~~ 179 (357)
T COG0707 148 -------------------------EAGVK--PENVVVTGIPVRPEFEE-LPAAEVR--------------------KDG 179 (357)
T ss_pred -------------------------cccCC--CCceEEecCcccHHhhc-cchhhhh--------------------hhc
Confidence 01222 55778888888765554 2222211 111
Q ss_pred cccCCCCcEEEEEe-ccCCcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEE
Q 002909 568 YLADRKKPIIFSMA-RLDTVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFR 646 (867)
Q Consensus 568 ll~~~~k~iIl~vG-RL~~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~ 646 (867)
..++++|+.+| .....+--+.+.++...+.+ +++++...+... .++++..-.+++. ++
T Consensus 180 ---~~~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~---~~~v~~~~G~~~------------~~~~~~~~~~~~~---~~ 238 (357)
T COG0707 180 ---RLDKKTILVTGGSQGAKALNDLVPEALAKLAN---RIQVIHQTGKND------------LEELKSAYNELGV---VR 238 (357)
T ss_pred ---cCCCcEEEEECCcchhHHHHHHHHHHHHHhhh---CeEEEEEcCcch------------HHHHHHHHhhcCc---EE
Confidence 12566666555 55554423333344444433 577777776532 3444444444443 78
Q ss_pred EcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCCc--------cceeecCceEEEeCCC
Q 002909 647 WIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP--------AEIIIDGVSGFHIDPN 718 (867)
Q Consensus 647 flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG~--------~EiI~dg~~G~lv~p~ 718 (867)
..++..| +..+|+. ||++|.=+ -++|+.|..++|+|+|--..... +..+++.+.|..++..
T Consensus 239 v~~f~~d------m~~~~~~-ADLvIsRa----Ga~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~ 307 (357)
T COG0707 239 VLPFIDD------MAALLAA-ADLVISRA----GALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQS 307 (357)
T ss_pred EeeHHhh------HHHHHHh-ccEEEeCC----cccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEeccc
Confidence 8887544 6777776 99999753 46999999999999998755333 3344555667777655
Q ss_pred C--HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHH
Q 002909 719 N--GDESSNKIADFFEKCKTDAGYWNQMSAAGRQRI 752 (867)
Q Consensus 719 d--~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v 752 (867)
+ ++.+.+.|.+++ ++++..++|.+++++..
T Consensus 308 ~lt~~~l~~~i~~l~----~~~~~l~~m~~~a~~~~ 339 (357)
T COG0707 308 ELTPEKLAELILRLL----SNPEKLKAMAENAKKLG 339 (357)
T ss_pred cCCHHHHHHHHHHHh----cCHHHHHHHHHHHHhcC
Confidence 5 778888888877 89999999999997754
No 106
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=99.22 E-value=6.4e-10 Score=137.00 Aligned_cols=325 Identities=11% Similarity=0.066 Sum_probs=211.6
Q ss_pred HHHHHHHHHHcCCCCeEEEECCCChHHHHHHHHHh-cCCcEEEEEcCCcccccccchhhhhhcCccccchhhhhHHHHHH
Q 002909 396 QDATAKILDLMEGKPDLIIGNYSDGNLVASLMASK-LGITQATIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAM 474 (867)
Q Consensus 396 ~~~~~~i~~~l~~kPDIIh~h~~~~~l~a~lla~~-~gip~V~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial 474 (867)
..+...+.+.....-|+|-.|.+...++..++.++ ...++.+..|..++..-.+..+.|. ..-+..|
T Consensus 188 ~~FA~~v~~~~~~~~d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~eifr~LP~r------------~eiL~gl 255 (854)
T PLN02205 188 KIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIR------------EELLRAL 255 (854)
T ss_pred HHHHHHHHHHhCCCCCEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCCCChHHHhhCCcH------------HHHHHHH
Confidence 33444444443111289999998888888888765 4578889999876654322222221 1122378
Q ss_pred hcCCEEEecCHHHHhhcCCCCCccccccccccccceeeeccCCCC--CCcEEEeCCCCCCCCCCCCch---HhhhhccCC
Q 002909 475 NQTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVF--DPKFNIAAPGADQSVYFPYTE---KQKRLTSFH 549 (867)
Q Consensus 475 ~~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~--~~ki~VIpnGVD~~~f~p~~~---~~~r~~~~~ 549 (867)
-.||.|-..|+..+..+-+........ ..... +...|+... .-++.+.|-|||...|..... ...+...
T Consensus 256 L~aDlIGFht~~yar~Fl~~~~r~lgl-~~~~~---~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~~~~~~~~~~-- 329 (854)
T PLN02205 256 LNSDLIGFHTFDYARHFLSCCSRMLGL-SYESK---RGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKE-- 329 (854)
T ss_pred hcCCeEEecCHHHHHHHHHHHHHHhCC-cccCC---CcceeEEECCcEEEEEEEeCeEcHHHHHHHhcChhHHHHHHH--
Confidence 899999999997776443322111000 00000 000122111 225778899999876633211 1111111
Q ss_pred cchHHhhhcccccccccccccCCCCcEEEEEeccCCcCChHHHHHHHHHhHccCCC----eEEEEEeCCCCCCCCCChHH
Q 002909 550 PDIEELLYSKEDNSEHIGYLADRKKPIIFSMARLDTVKNITGLTEWYGKNKRLRNM----VNLVVVAGFFDPSKSHDREE 625 (867)
Q Consensus 550 ~~i~~~l~~~~~~~~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~~----v~LvIVG~g~~~~~~~d~ee 625 (867)
.++.++ .+++.+|+.+.|++..||+..=+.||.++.+.+|. +.|+-+..... +...+.
T Consensus 330 ------------l~~~~~---~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr---~~~~~y 391 (854)
T PLN02205 330 ------------LIKQFC---DQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPAR---GKGKDV 391 (854)
T ss_pred ------------HHHHhc---cCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCC---cccHHH
Confidence 012222 24678999999999999999999999999877665 46776765432 333455
Q ss_pred HHHHHHHHHHHHHc----CCCC--cEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCC-------
Q 002909 626 IAEIKKMHTLIEKY----QLQG--QFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGL------- 692 (867)
Q Consensus 626 ~~~~~~l~~li~~~----~L~~--~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~Gl------- 692 (867)
.+...++.+++.+. +-.+ -|.++. ..++..|+..+|.. ||+++.++..+|+.|+..|+.+|..
T Consensus 392 ~~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~---~~~~~~e~~aly~~-ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~ 467 (854)
T PLN02205 392 KEVQAETHSTVKRINETFGKPGYDPIVLID---APLKFYERVAYYVV-AECCLVTAVRDGMNLIPYEYIISRQGNEKLDK 467 (854)
T ss_pred HHHHHHHHHHHHHHHhhcCCCCCceEEEEe---cCCCHHHHHHHHHh-ccEEEeccccccccccchheeEEccCcccccc
Confidence 55555666666653 3221 355553 25678999999997 9999999999999999999999964
Q ss_pred ------------CEEecCCCCccceeecCceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHH
Q 002909 693 ------------PTFATNQGGPAEIIIDGVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKI 760 (867)
Q Consensus 693 ------------PVIat~~gG~~EiI~dg~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~ 760 (867)
.+|.|...|.+..+. ..+.|+|.|.+++|++|.++++ .+++.++.--+..++++ ..++...
T Consensus 468 ~~~~~~~~~~~gvLiLSEfaGaa~~L~---~Ai~VNP~d~~~~a~ai~~AL~---m~~~Er~~R~~~~~~~v-~~~d~~~ 540 (854)
T PLN02205 468 LLGLEPSTPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIDAVADAMDSALE---MAEPEKQLRHEKHYRYV-STHDVGY 540 (854)
T ss_pred ccccccccCCCCceEeeeccchhHHhC---cCeEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-hhCCHHH
Confidence 367788877777662 3789999999999999999985 56666665556666666 7788888
Q ss_pred HHHHHHH
Q 002909 761 YANKVLN 767 (867)
Q Consensus 761 ~a~~ll~ 767 (867)
.++.++.
T Consensus 541 W~~~fl~ 547 (854)
T PLN02205 541 WARSFLQ 547 (854)
T ss_pred HHHHHHH
Confidence 8887776
No 107
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=99.21 E-value=1.8e-09 Score=123.55 Aligned_cols=315 Identities=16% Similarity=0.104 Sum_probs=205.5
Q ss_pred CeEEEECCCChHHHHHHHHHhc-CCcEEEEEcCCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHHHH
Q 002909 410 PDLIIGNYSDGNLVASLMASKL-GITQATIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQEI 488 (867)
Q Consensus 410 PDIIh~h~~~~~l~a~lla~~~-gip~V~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~~~ 488 (867)
=|+|-.|.....+++..+..+. ..+..+..|..++..-.+.-+.|. ..=.-.+-.||+|-..++..+
T Consensus 148 gDiIWVhDYhL~L~P~mlR~~~~~~~IgfFlHiPfPssEvfr~lP~r------------~eIl~gll~~dligFqt~~y~ 215 (486)
T COG0380 148 GDIIWVHDYHLLLVPQMLRERIPDAKIGFFLHIPFPSSEVFRCLPWR------------EEILEGLLGADLIGFQTESYA 215 (486)
T ss_pred CCEEEEEechhhhhHHHHHHhCCCceEEEEEeCCCCCHHHHhhCchH------------HHHHHHhhcCCeeEecCHHHH
Confidence 3999999888878888887654 456778899877665332222221 111226788999999998776
Q ss_pred hhcCCCCCccccccccccccceeee-ccCCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccccccc
Q 002909 489 AGSKDRPGQYESHTAFTMPGLCRVV-SGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEHIG 567 (867)
Q Consensus 489 ~~~k~~~gqY~s~~~~~lp~l~~v~-~GI~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~lG 567 (867)
..+-+++.+-... + +...+. +|.+-...++..+|-|||...|........-. ..+.++. +.+
T Consensus 216 ~nF~~~~~r~~~~---~--~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~----~~~~el~-------~~~- 278 (486)
T COG0380 216 RNFLDLCSRLLGV---T--GDADIRFNGADGRIVKVGAFPIGIDPEEFERALKSPSVQ----EKVLELK-------AEL- 278 (486)
T ss_pred HHHHHHHHHhccc---c--ccccccccccCCceEEEEEEeeecCHHHHHHhhcCCchh----hHHHHHH-------HHh-
Confidence 6544333221100 0 000011 11100023567788999987664332111000 0011000 111
Q ss_pred cccCCCCcEEEEEeccCCcCChHHHHHHHHHhHccCC----CeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcC-CC
Q 002909 568 YLADRKKPIIFSMARLDTVKNITGLTEWYGKNKRLRN----MVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQ-LQ 642 (867)
Q Consensus 568 ll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~----~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~-L~ 642 (867)
..++.+|+.+.|++..||+..=+.||.++.+.+| ++.|+-++.... ..-.+.+.+..++..++.+.+ .-
T Consensus 279 ---~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvliQi~~pSr---~~v~~y~~~~~~i~~~V~rIN~~f 352 (486)
T COG0380 279 ---GRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPSR---EDVEEYQALRLQIEELVGRINGEF 352 (486)
T ss_pred ---cCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEEEecCCCc---cccHHHHHHHHHHHHHHHHHHhhc
Confidence 2348899999999999999999999999986555 567777776544 233334445556666666543 22
Q ss_pred CcEEEcc--cccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcC----CCEEecCCCCccceeecCceEEEeC
Q 002909 643 GQFRWIA--AQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCG----LPTFATNQGGPAEIIIDGVSGFHID 716 (867)
Q Consensus 643 ~~V~flG--~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~G----lPVIat~~gG~~EiI~dg~~G~lv~ 716 (867)
+++.|.+ +....++..+++.++.. +|+++.++.-+|+.++..|+.+|- =|.|-|...|.+..+.+ .++++
T Consensus 353 G~~~~~Pv~~l~~~~~~~~l~al~~~-aDv~lVtplrDGMNLvakEyVa~q~~~~G~LiLSeFaGaa~~L~~---AliVN 428 (486)
T COG0380 353 GSLSWTPVHYLHRDLDRNELLALYRA-ADVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFAGAASELRD---ALIVN 428 (486)
T ss_pred CCCCcceeEEEeccCCHHHHHHHHhh-hceeeeccccccccHHHHHHHHhhcCCCCcEEEeccccchhhhcc---CEeEC
Confidence 3333322 12234678999999997 999999999999999999999984 47788888887777744 78999
Q ss_pred CCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 002909 717 PNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKVLN 767 (867)
Q Consensus 717 p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll~ 767 (867)
|.|.+++|++|...++ .+++.+++--+..++.+ ..+|....++.++.
T Consensus 429 P~d~~~va~ai~~AL~---m~~eEr~~r~~~~~~~v-~~~d~~~W~~~fl~ 475 (486)
T COG0380 429 PWDTKEVADAIKRALT---MSLEERKERHEKLLKQV-LTHDVARWANSFLD 475 (486)
T ss_pred CCChHHHHHHHHHHhc---CCHHHHHHHHHHHHHHH-HhhhHHHHHHHHHH
Confidence 9999999999999985 67777776666666666 67777777777655
No 108
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=99.14 E-value=4.6e-09 Score=120.85 Aligned_cols=135 Identities=13% Similarity=0.137 Sum_probs=107.1
Q ss_pred HHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccccCCCChHHHHHHHHccCc
Q 002909 590 TGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTDRYRNGELYRCIADTKG 669 (867)
Q Consensus 590 d~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d~v~~~el~~~la~~aD 669 (867)
+..++++..+.+..|+++|.| |.+.+ ...+|.++ +++ ++.+.+.|..+ ..+-..+.. ||
T Consensus 291 s~~I~~i~~Lv~~lPd~~f~I-ga~te-----------~s~kL~~L-~~y--~nvvly~~~~~-----~~l~~ly~~-~d 349 (438)
T TIGR02919 291 SDQIEHLEEIVQALPDYHFHI-AALTE-----------MSSKLMSL-DKY--DNVKLYPNITT-----QKIQELYQT-CD 349 (438)
T ss_pred HHHHHHHHHHHHhCCCcEEEE-EecCc-----------ccHHHHHH-Hhc--CCcEEECCcCh-----HHHHHHHHh-cc
Confidence 899999999999999999999 66643 12677777 666 56667777544 234455554 99
Q ss_pred EEEEcCCCCCCCHHHHHHHHcCCCEEecCC-CCccceeecCceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHH
Q 002909 670 AFVQPALYEAFGLTVIEAMNCGLPTFATNQ-GGPAEIIIDGVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAG 748 (867)
Q Consensus 670 vfV~PS~~EgfGltvlEAMa~GlPVIat~~-gG~~EiI~dg~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~a 748 (867)
+++-.|..|+|++++.||+..|+|+|+.+. -|+.+++.+ |.+++.+|+++|+++|.+++ .|++.+++.-..-
T Consensus 350 lyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~---g~l~~~~~~~~m~~~i~~lL----~d~~~~~~~~~~q 422 (438)
T TIGR02919 350 IYLDINHGNEILNAVRRAFEYNLLILGFEETAHNRDFIAS---ENIFEHNEVDQLISKLKDLL----NDPNQFRELLEQQ 422 (438)
T ss_pred EEEEccccccHHHHHHHHHHcCCcEEEEecccCCcccccC---CceecCCCHHHHHHHHHHHh----cCHHHHHHHHHHH
Confidence 999999999999999999999999999875 466788866 88999999999999999998 8987776654444
Q ss_pred HHHH
Q 002909 749 RQRI 752 (867)
Q Consensus 749 r~~v 752 (867)
++.+
T Consensus 423 ~~~a 426 (438)
T TIGR02919 423 REHA 426 (438)
T ss_pred HHHh
Confidence 4443
No 109
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=98.97 E-value=1e-08 Score=104.02 Aligned_cols=177 Identities=22% Similarity=0.234 Sum_probs=116.7
Q ss_pred cceEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCCCCCCCCCCCCcccccc
Q 002909 280 MFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLIPNSKGTKCSQELEPIY 359 (867)
Q Consensus 280 ~~rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~~~~~g~~~~~~~e~i~ 359 (867)
|.||+|+...|.|. .-||.|+.+. +|+.+|+++||+|+ |.|+.... ... ..
T Consensus 1 mkkIaIiGtrGIPa--------~YGGfET~ve--------~L~~~l~~~g~~v~----Vyc~~~~~------~~~---~~ 51 (185)
T PF09314_consen 1 MKKIAIIGTRGIPA--------RYGGFETFVE--------ELAPRLVSKGIDVT----VYCRSDYY------PYK---EF 51 (185)
T ss_pred CceEEEEeCCCCCc--------ccCcHHHHHH--------HHHHHHhcCCceEE----EEEccCCC------CCC---Cc
Confidence 35899999999984 3799999998 78889999999999 99984211 111 12
Q ss_pred CCCCeEEEEccCCCcccccccccccccchhhHHHHHHHHHHHH--H---HHcCCCCeEEEECCCC-hHHHHHHHHH--hc
Q 002909 360 DTKHSHILRIPFKTEQAILPQWVSRFDIYPYLGRFAQDATAKI--L---DLMEGKPDLIIGNYSD-GNLVASLMAS--KL 431 (867)
Q Consensus 360 ~~~~v~I~rvp~~~~~~~l~~~isr~~i~p~l~~f~~~~~~~i--~---~~l~~kPDIIh~h~~~-~~l~a~lla~--~~ 431 (867)
...|++++.+|.....+ +.++..++...+ + +.-..+.||||.+... ++++..++.. +.
T Consensus 52 ~y~gv~l~~i~~~~~g~--------------~~si~yd~~sl~~al~~~~~~~~~~~ii~ilg~~~g~~~~~~~r~~~~~ 117 (185)
T PF09314_consen 52 EYNGVRLVYIPAPKNGS--------------AESIIYDFLSLLHALRFIKQDKIKYDIILILGYGIGPFFLPFLRKLRKK 117 (185)
T ss_pred ccCCeEEEEeCCCCCCc--------------hHHHHHHHHHHHHHHHHHhhccccCCEEEEEcCCccHHHHHHHHhhhhc
Confidence 23488999998664211 222222222211 1 1112357899988765 5555555543 35
Q ss_pred CCcEEEEEcCCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHHHHhhcCCCCCcccccccccccccee
Q 002909 432 GITQATIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCR 511 (867)
Q Consensus 432 gip~V~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~ 511 (867)
|.|+++++|+++..+- +|..+.+.| ....|.++.+.+|.+|+-|....+.+++.++
T Consensus 118 g~~v~vN~DGlEWkR~-----KW~~~~k~~----lk~~E~~avk~ad~lIaDs~~I~~y~~~~y~--------------- 173 (185)
T PF09314_consen 118 GGKVVVNMDGLEWKRA-----KWGRPAKKY----LKFSEKLAVKYADRLIADSKGIQDYIKERYG--------------- 173 (185)
T ss_pred CCcEEECCCcchhhhh-----hcCHHHHHH----HHHHHHHHHHhCCEEEEcCHHHHHHHHHHcC---------------
Confidence 7799999999876552 455544433 2345778999999999999877664443211
Q ss_pred eeccCCCCCCcEEEeCCCCC
Q 002909 512 VVSGINVFDPKFNIAAPGAD 531 (867)
Q Consensus 512 v~~GI~~~~~ki~VIpnGVD 531 (867)
..+..+|++|.|
T Consensus 174 --------~~~s~~IaYGad 185 (185)
T PF09314_consen 174 --------RKKSTFIAYGAD 185 (185)
T ss_pred --------CCCcEEecCCCC
Confidence 367899999987
No 110
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=98.94 E-value=2.3e-07 Score=105.85 Aligned_cols=124 Identities=13% Similarity=0.050 Sum_probs=81.1
Q ss_pred CCCCcEEEEEeccCC---cCChHHHHHHHHHhHccCCCeEEEE-EeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEE
Q 002909 571 DRKKPIIFSMARLDT---VKNITGLTEWYGKNKRLRNMVNLVV-VAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFR 646 (867)
Q Consensus 571 ~~~k~iIl~vGRL~~---~Kgid~LieA~~~l~~~~~~v~LvI-VG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~ 646 (867)
+.+.+++++.|.... .+-...+++++..+ +.++++ +|.... .. ..++++|.
T Consensus 237 ~~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~-----~~~~i~~~g~~~~-------------~~-------~~~~~~v~ 291 (401)
T cd03784 237 AGRPPVYVGFGSMVVRDPEALARLDVEAVATL-----GQRAILSLGWGGL-------------GA-------EDLPDNVR 291 (401)
T ss_pred CCCCcEEEeCCCCcccCHHHHHHHHHHHHHHc-----CCeEEEEccCccc-------------cc-------cCCCCceE
Confidence 344567788888754 23344555555543 345444 444332 00 24568999
Q ss_pred EcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCC----ccceeecCceEEEeCCC--CH
Q 002909 647 WIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEIIIDGVSGFHIDPN--NG 720 (867)
Q Consensus 647 flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG----~~EiI~dg~~G~lv~p~--d~ 720 (867)
+.++ ++..+++. .||++|.- |-..++.||+++|+|+|.....+ .++.+...+.|..++.. +.
T Consensus 292 ~~~~----~p~~~ll~----~~d~~I~h----gG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~~~ 359 (401)
T cd03784 292 VVDF----VPHDWLLP----RCAAVVHH----GGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPRELTA 359 (401)
T ss_pred EeCC----CCHHHHhh----hhheeeec----CCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccCCH
Confidence 9996 34455554 49999954 33478999999999999997655 24455556678877665 67
Q ss_pred HHHHHHHHHHH
Q 002909 721 DESSNKIADFF 731 (867)
Q Consensus 721 e~lA~aI~~ll 731 (867)
+++++++.+++
T Consensus 360 ~~l~~al~~~l 370 (401)
T cd03784 360 ERLAAALRRLL 370 (401)
T ss_pred HHHHHHHHHHh
Confidence 88888888877
No 111
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=98.93 E-value=4.8e-09 Score=112.20 Aligned_cols=185 Identities=15% Similarity=0.087 Sum_probs=99.2
Q ss_pred eEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCCCCCCCCCC-CCcccccc-
Q 002909 282 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLIPNSKGTKC-SQELEPIY- 359 (867)
Q Consensus 282 rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~~~~~g~~~-~~~~e~i~- 359 (867)
||++||.-..|- -.+||...++- .|+++|+++||+|. |+++.......... ........
T Consensus 1 kIl~vt~E~~P~-------~k~GGLgdv~~--------~L~kaL~~~G~~V~----Vi~P~y~~~~~~~~~~~~~~~~~~ 61 (245)
T PF08323_consen 1 KILMVTSEYAPF-------AKVGGLGDVVG--------SLPKALAKQGHDVR----VIMPKYGFIDEEYFQLEPVRRLSV 61 (245)
T ss_dssp EEEEE-S-BTTT-------B-SSHHHHHHH--------HHHHHHHHTT-EEE----EEEE-THHHHHHCTTEEEEEEES-
T ss_pred CEEEEEcccCcc-------cccCcHhHHHH--------HHHHHHHhcCCeEE----EEEccchhhhhhhhcceEEEEecc
Confidence 799999887762 25899998888 45567788999999 99986522110000 00000000
Q ss_pred -------------------CCCCeEEEEccCCCcccccccccccccch--------hhHH--HHHHHHHHHHHHHcCCCC
Q 002909 360 -------------------DTKHSHILRIPFKTEQAILPQWVSRFDIY--------PYLG--RFAQDATAKILDLMEGKP 410 (867)
Q Consensus 360 -------------------~~~~v~I~rvp~~~~~~~l~~~isr~~i~--------p~l~--~f~~~~~~~i~~~l~~kP 410 (867)
..+++.++-+.-. .+.++..++ .... .|...+..++.+.++.+|
T Consensus 62 ~~~~~v~~~~~~~~~v~~~~~~~v~v~~i~~~-------~~f~r~~iY~~~~~~~~d~~~rf~~fs~a~le~~~~l~~~p 134 (245)
T PF08323_consen 62 PFGGPVPVGVWYEVRVYRYPVDGVPVYFIDNP-------EYFDRPGIYGDNGGDYPDNAERFAFFSRAALELLKKLGWKP 134 (245)
T ss_dssp STTCEEEEE----EEEEEEEETTEEEEEEESH-------HHHGSSSSSBSTSSBHTTHHHHHHHHHHHHHHHHCTCT-S-
T ss_pred ccccccccccceEEEEEEEEcCCccEEEecCh-------hhccccceeccCCCcchhHHHHHHHHHHHHHHHHHhhCCCC
Confidence 0013333322211 112222233 1122 223334444444455699
Q ss_pred eEEEECCCChHHHHHHHHHhc-------CCcEEEEEcCCcccccccc------hhhhhh--cCccccchhhhhHHHHHHh
Q 002909 411 DLIIGNYSDGNLVASLMASKL-------GITQATIAHALEKSKYEDS------DAKWKE--LDPKYHFSCQFTADLIAMN 475 (867)
Q Consensus 411 DIIh~h~~~~~l~a~lla~~~-------gip~V~t~H~l~~~~~~~s------~~~~~~--~~~~y~f~~~~~~e~ial~ 475 (867)
||||+|.|.+++++.+++... ++|+|+|+|++..+..... ++.+.. ....+.+.......+.++.
T Consensus 135 DIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~~~~~~~~~in~lk~gi~ 214 (245)
T PF08323_consen 135 DIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNLDEYEFYGQINFLKAGIV 214 (245)
T ss_dssp SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-STTTTEETTEEEHHHHHHH
T ss_pred CEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhccccccccccccCHHHHHHH
Confidence 999999999999999988775 5999999999866553221 112211 1112222333334456899
Q ss_pred cCCEEEecCHHHHhhcC
Q 002909 476 QTDFIITSTYQEIAGSK 492 (867)
Q Consensus 476 ~aD~IIa~S~~~~~~~k 492 (867)
.||.|+|+|+..++.+.
T Consensus 215 ~AD~v~TVS~~Ya~Ei~ 231 (245)
T PF08323_consen 215 YADKVTTVSPTYAREIQ 231 (245)
T ss_dssp HSSEEEESSHHHHHHTT
T ss_pred hcCEeeeCCHHHHHHHh
Confidence 99999999998877544
No 112
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=98.85 E-value=1.2e-06 Score=100.29 Aligned_cols=166 Identities=13% Similarity=0.157 Sum_probs=105.0
Q ss_pred CCcEE-EEEecc--CCcCChHHHHHHHHHhHccCCCeEEEEEe-CCCCCCCCCChHHHHHHHHHHHHHHHcCCC------
Q 002909 573 KKPII-FSMARL--DTVKNITGLTEWYGKNKRLRNMVNLVVVA-GFFDPSKSHDREEIAEIKKMHTLIEKYQLQ------ 642 (867)
Q Consensus 573 ~k~iI-l~vGRL--~~~Kgid~LieA~~~l~~~~~~v~LvIVG-~g~~~~~~~d~ee~~~~~~l~~li~~~~L~------ 642 (867)
++++| +..|.- .-.+++..+++++..+.+. +++++++.- ++.+ .+.+++..++.+..
T Consensus 204 ~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~-~~~~~v~~~~~~~~------------~~~~~~~l~~~g~~~~~~~~ 270 (396)
T TIGR03492 204 GRFRIALLPGSRPPEAYRNLKLLLRALEALPDS-QPFVFLAAIVPSLS------------LEKLQAILEDLGWQLEGSSE 270 (396)
T ss_pred CCCEEEEECCCCHHHHHccHHHHHHHHHHHhhC-CCeEEEEEeCCCCC------------HHHHHHHHHhcCceecCCcc
Confidence 33444 444433 2357888999999999765 678877665 3332 24455555544432
Q ss_pred --------CcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCCc---cceeecC--
Q 002909 643 --------GQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP---AEIIIDG-- 709 (867)
Q Consensus 643 --------~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG~---~EiI~dg-- 709 (867)
+++.+..+ ..++..+++. ||++|..| |.+..|++++|+|+|.....+. ..+.+..
T Consensus 271 ~~~~~~~~~~~~v~~~------~~~~~~~l~~-ADlvI~rS-----Gt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~~ 338 (396)
T TIGR03492 271 DQTSLFQKGTLEVLLG------RGAFAEILHW-ADLGIAMA-----GTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQSR 338 (396)
T ss_pred ccchhhccCceEEEec------hHhHHHHHHh-CCEEEECc-----CHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhHh
Confidence 22555443 2356777776 99999885 5566999999999999874333 1222221
Q ss_pred --ceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 002909 710 --VSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKVLN 767 (867)
Q Consensus 710 --~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll~ 767 (867)
..+..+...+++.+++.+.+++ .|++.+++|.++++++..+....+.+++.+.+
T Consensus 339 l~g~~~~l~~~~~~~l~~~l~~ll----~d~~~~~~~~~~~~~~lg~~~a~~~ia~~i~~ 394 (396)
T TIGR03492 339 LLGGSVFLASKNPEQAAQVVRQLL----ADPELLERCRRNGQERMGPPGASARIAESILK 394 (396)
T ss_pred hcCCEEecCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 2444555677889999998887 89998888886565555444555555554443
No 113
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=98.84 E-value=2.6e-06 Score=97.22 Aligned_cols=111 Identities=20% Similarity=0.253 Sum_probs=74.0
Q ss_pred CCCcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCCc----cceeecCceEEEeC
Q 002909 641 LQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP----AEIIIDGVSGFHID 716 (867)
Q Consensus 641 L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG~----~EiI~dg~~G~lv~ 716 (867)
++++|.+.++.+ ..++ +. .||++|..+ | ..++.|||++|+|+|+....+- .+.+.+.+.|..+.
T Consensus 273 ~~~~v~~~~~~p----~~~l---l~-~~~~~I~hg---G-~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~ 340 (392)
T TIGR01426 273 LPPNVEVRQWVP----QLEI---LK-KADAFITHG---G-MNSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLP 340 (392)
T ss_pred CCCCeEEeCCCC----HHHH---Hh-hCCEEEECC---C-chHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEec
Confidence 467899988643 3444 44 499999764 2 2479999999999999755442 33344556777776
Q ss_pred CC--CHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 002909 717 PN--NGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKVLNM 768 (867)
Q Consensus 717 p~--d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll~l 768 (867)
.. ++++++++|.+++ .|++.++++.+- .+.+...-.-+..++.++++
T Consensus 341 ~~~~~~~~l~~ai~~~l----~~~~~~~~~~~l-~~~~~~~~~~~~aa~~i~~~ 389 (392)
T TIGR01426 341 PEEVTAEKLREAVLAVL----SDPRYAERLRKM-RAEIREAGGARRAADEIEGF 389 (392)
T ss_pred cccCCHHHHHHHHHHHh----cCHHHHHHHHHH-HHHHHHcCCHHHHHHHHHHh
Confidence 43 5688999998887 888876665433 33444455666666666553
No 114
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=98.78 E-value=4.9e-07 Score=99.81 Aligned_cols=116 Identities=13% Similarity=0.108 Sum_probs=79.2
Q ss_pred CCCcEEEEEeccCCcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccc
Q 002909 572 RKKPIIFSMARLDTVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQ 651 (867)
Q Consensus 572 ~~k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~ 651 (867)
+.+.+++++|..+.. .+++++..+ ++.+++++|.... + ...++|++.++.
T Consensus 191 ~~~~iLv~~gg~~~~----~~~~~l~~~----~~~~~~v~g~~~~--------------------~--~~~~ni~~~~~~ 240 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG----DLIEALKAL----PDYQFIVFGPNAA--------------------D--PRPGNIHVRPFS 240 (318)
T ss_pred CCCEEEEEeCCCcHH----HHHHHHHhC----CCCeEEEEcCCcc--------------------c--ccCCCEEEeecC
Confidence 456688999988665 566666654 4688888876531 0 015889988853
Q ss_pred cCCCChHHHHHHHHccCcEEEEcCCCCCCCH-HHHHHHHcCCCEEecCCCCcccee------ecCceEEEeCC--CCHHH
Q 002909 652 TDRYRNGELYRCIADTKGAFVQPALYEAFGL-TVIEAMNCGLPTFATNQGGPAEII------IDGVSGFHIDP--NNGDE 722 (867)
Q Consensus 652 ~d~v~~~el~~~la~~aDvfV~PS~~EgfGl-tvlEAMa~GlPVIat~~gG~~EiI------~dg~~G~lv~p--~d~e~ 722 (867)
..++.++++. ||++|.-+ |. ++.||+++|+|++.-...+..|-. ..-+.|..+++ -+++.
T Consensus 241 -----~~~~~~~m~~-ad~vIs~~-----G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~ 309 (318)
T PF13528_consen 241 -----TPDFAELMAA-ADLVISKG-----GYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPER 309 (318)
T ss_pred -----hHHHHHHHHh-CCEEEECC-----CHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHH
Confidence 2467888887 99999763 44 499999999999998776644432 34455666553 34566
Q ss_pred HHHHHH
Q 002909 723 SSNKIA 728 (867)
Q Consensus 723 lA~aI~ 728 (867)
+++.|.
T Consensus 310 l~~~l~ 315 (318)
T PF13528_consen 310 LAEFLE 315 (318)
T ss_pred HHHHHh
Confidence 666664
No 115
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=98.64 E-value=4.3e-06 Score=94.78 Aligned_cols=273 Identities=14% Similarity=0.142 Sum_probs=151.0
Q ss_pred HHHHHHHHHHcCCCCeEEEECC-CChHHHHHHHHHhcCCcEEEEEcCCcccccccchhhhhhcCccccchhhhhHHHHHH
Q 002909 396 QDATAKILDLMEGKPDLIIGNY-SDGNLVASLMASKLGITQATIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAM 474 (867)
Q Consensus 396 ~~~~~~i~~~l~~kPDIIh~h~-~~~~l~a~lla~~~gip~V~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial 474 (867)
..+.+.+.+ .+||+|..+. ....+.+.+.|..++||+++..-+...... .+.. . ....-
T Consensus 83 ~~~~~~~~~---~~Pd~vlv~GD~~~~la~alaA~~~~IPv~HveaG~rs~~~---------~eE~---~-----r~~i~ 142 (365)
T TIGR03568 83 IGFSDAFER---LKPDLVVVLGDRFEMLAAAIAAALLNIPIAHIHGGEVTEGA---------IDES---I-----RHAIT 142 (365)
T ss_pred HHHHHHHHH---hCCCEEEEeCCchHHHHHHHHHHHhCCcEEEEECCccCCCC---------chHH---H-----HHHHH
Confidence 344444444 4899999987 556778899999999999844322211110 0100 0 01123
Q ss_pred hcCCEEEecCHHHHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCC-CCCCCCCCCCchHhhhhccCCcchH
Q 002909 475 NQTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAP-GADQSVYFPYTEKQKRLTSFHPDIE 553 (867)
Q Consensus 475 ~~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpn-GVD~~~f~p~~~~~~r~~~~~~~i~ 553 (867)
+-||...+.++...+.+. .-|++ +.++.++-| ++|.-.........
T Consensus 143 ~la~l~f~~t~~~~~~L~--------------------~eg~~--~~~i~~tG~~~iD~l~~~~~~~~~----------- 189 (365)
T TIGR03568 143 KLSHLHFVATEEYRQRVI--------------------QMGED--PDRVFNVGSPGLDNILSLDLLSKE----------- 189 (365)
T ss_pred HHHhhccCCCHHHHHHHH--------------------HcCCC--CCcEEEECCcHHHHHHhhhccCHH-----------
Confidence 446777777766554211 12444 556766644 66643221111110
Q ss_pred HhhhcccccccccccccCCC-CcEEEEEeccC--Cc---CChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHH
Q 002909 554 ELLYSKEDNSEHIGYLADRK-KPIIFSMARLD--TV---KNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIA 627 (867)
Q Consensus 554 ~~l~~~~~~~~~lGll~~~~-k~iIl~vGRL~--~~---Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~ 627 (867)
...+.+|+ +.+ +.+++.+-+-. .. +.+..+++++..+ ..++ +++....++ .+..
T Consensus 190 -------~~~~~lgl--~~~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~---~~~~--~vi~P~~~p------~~~~ 249 (365)
T TIGR03568 190 -------ELEEKLGI--DLDKPYALVTFHPVTLEKESAEEQIKELLKALDEL---NKNY--IFTYPNADA------GSRI 249 (365)
T ss_pred -------HHHHHhCC--CCCCCEEEEEeCCCcccccCchHHHHHHHHHHHHh---ccCC--EEEEeCCCC------CchH
Confidence 11144565 433 34444554432 33 3344555555433 2234 334322110 0111
Q ss_pred HHHHHHHHHHHcCCCCcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCCccceee
Q 002909 628 EIKKMHTLIEKYQLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIII 707 (867)
Q Consensus 628 ~~~~l~~li~~~~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG~~EiI~ 707 (867)
..+.+.++... .++|++++ ..+..++..++.. |+++|--|. | .+.||.++|+|||+ .|.-.|.+.
T Consensus 250 i~~~i~~~~~~---~~~v~l~~----~l~~~~~l~Ll~~-a~~vitdSS----g-gi~EA~~lg~Pvv~--l~~R~e~~~ 314 (365)
T TIGR03568 250 INEAIEEYVNE---HPNFRLFK----SLGQERYLSLLKN-ADAVIGNSS----S-GIIEAPSFGVPTIN--IGTRQKGRL 314 (365)
T ss_pred HHHHHHHHhcC---CCCEEEEC----CCChHHHHHHHHh-CCEEEEcCh----h-HHHhhhhcCCCEEe--ecCCchhhh
Confidence 12233333211 46899999 5678899999997 999995531 3 34899999999995 456788887
Q ss_pred cCceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 002909 708 DGVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKVLN 767 (867)
Q Consensus 708 dg~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll~ 767 (867)
.|.+++++ +.|++++.+++.+++ +++.+..+ .....-|.....++++.+
T Consensus 315 ~g~nvl~v-g~~~~~I~~a~~~~~-----~~~~~~~~-----~~~~~pygdg~as~rI~~ 363 (365)
T TIGR03568 315 RADSVIDV-DPDKEEIVKAIEKLL-----DPAFKKSL-----KNVKNPYGDGNSSERIIE 363 (365)
T ss_pred hcCeEEEe-CCCHHHHHHHHHHHh-----ChHHHHHH-----hhCCCCCCCChHHHHHHH
Confidence 78888878 568999999998743 44433332 122245766667777665
No 116
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=98.63 E-value=5.6e-07 Score=86.86 Aligned_cols=123 Identities=20% Similarity=0.205 Sum_probs=77.7
Q ss_pred HHHHHHHHCCCceeeccEEEecCCCCCCCCCCCCccccccCCCCeEEEEccCCCcccccccccccccchhhHHHHHHHHH
Q 002909 320 ELLLRIKQQGLSVKPQILVVTRLIPNSKGTKCSQELEPIYDTKHSHILRIPFKTEQAILPQWVSRFDIYPYLGRFAQDAT 399 (867)
Q Consensus 320 eLa~~L~~~GheV~~~V~VvT~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~l~~~isr~~i~p~l~~f~~~~~ 399 (867)
.+++.|.++||+|+ ++|.... . +.....+++.+.+++... ....+++. +. .+.
T Consensus 15 ~~~~~L~~~g~~V~----ii~~~~~---------~-~~~~~~~~i~~~~~~~~~-----------k~~~~~~~-~~-~l~ 67 (139)
T PF13477_consen 15 NLAKELKKRGYDVH----IITPRND---------Y-EKYEIIEGIKVIRLPSPR-----------KSPLNYIK-YF-RLR 67 (139)
T ss_pred HHHHHHHHCCCEEE----EEEcCCC---------c-hhhhHhCCeEEEEecCCC-----------CccHHHHH-HH-HHH
Confidence 45667888999999 9987311 0 111223478888886432 11444543 22 444
Q ss_pred HHHHHHcCCCCeEEEECCCCh-HHHHHHHHHhcC-CcEEEEEcCCcccccccchhhhhhcCccccchhhhhHHHHHHhcC
Q 002909 400 AKILDLMEGKPDLIIGNYSDG-NLVASLMASKLG-ITQATIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQT 477 (867)
Q Consensus 400 ~~i~~~l~~kPDIIh~h~~~~-~l~a~lla~~~g-ip~V~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~a 477 (867)
+.+.+ .+|||||+|...+ ++.+.++++..+ +|++++.|+........ ... .+.+ ....+++.+
T Consensus 68 k~ik~---~~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~hg~~~~~~~~-~~~------~~~~-----~~~~~~k~~ 132 (139)
T PF13477_consen 68 KIIKK---EKPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVHGSDFYNSSK-KKK------LKKF-----IIKFAFKRA 132 (139)
T ss_pred HHhcc---CCCCEEEEecCChHHHHHHHHHHHcCCCCEEEEecCCeeecCCc-hHH------HHHH-----HHHHHHHhC
Confidence 44444 4899999999876 788888888888 99999999864422111 000 0111 234588999
Q ss_pred CEEEecC
Q 002909 478 DFIITST 484 (867)
Q Consensus 478 D~IIa~S 484 (867)
|.|++.|
T Consensus 133 ~~ii~~~ 139 (139)
T PF13477_consen 133 DKIIVQS 139 (139)
T ss_pred CEEEEcC
Confidence 9999875
No 117
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=98.60 E-value=2.2e-05 Score=87.94 Aligned_cols=264 Identities=15% Similarity=0.154 Sum_probs=162.9
Q ss_pred CCCeEEEECCCChHHHHHHHHHhcCCcEEEE-EcCCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHH
Q 002909 408 GKPDLIIGNYSDGNLVASLMASKLGITQATI-AHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQ 486 (867)
Q Consensus 408 ~kPDIIh~h~~~~~l~a~lla~~~gip~V~t-~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~ 486 (867)
.+||+.+.--+..-.....-+++.|+|++.. ..-.+..- ..|.....+ -+..+.+.|.|++-|+.
T Consensus 122 ~~P~l~Ii~EtElWPnli~e~~~~~~p~~LvNaRLS~rS~------------~~y~k~~~~--~~~~~~~i~li~aQse~ 187 (419)
T COG1519 122 WRPKLLIIMETELWPNLINELKRRGIPLVLVNARLSDRSF------------ARYAKLKFL--ARLLFKNIDLILAQSEE 187 (419)
T ss_pred cCCCEEEEEeccccHHHHHHHHHcCCCEEEEeeeechhhh------------HHHHHHHHH--HHHHHHhcceeeecCHH
Confidence 3899888664433223334467889998744 22111111 111111222 23367899999999998
Q ss_pred HHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCC-CCCCCCCCCCchHhhhhccCCcchHHhhhcccccccc
Q 002909 487 EIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAP-GADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEH 565 (867)
Q Consensus 487 ~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpn-GVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~ 565 (867)
..+.+.+. |+. ++.+.-| =.|.+ |.......... .+..
T Consensus 188 D~~Rf~~L--------------------Ga~----~v~v~GNlKfd~~---~~~~~~~~~~~--------------~r~~ 226 (419)
T COG1519 188 DAQRFRSL--------------------GAK----PVVVTGNLKFDIE---PPPQLAAELAA--------------LRRQ 226 (419)
T ss_pred HHHHHHhc--------------------CCc----ceEEecceeecCC---CChhhHHHHHH--------------HHHh
Confidence 87744322 322 3444333 11111 11111111100 1122
Q ss_pred cccccCCCCcEEEEEeccCCcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCc-
Q 002909 566 IGYLADRKKPIIFSMARLDTVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQ- 644 (867)
Q Consensus 566 lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~- 644 (867)
++ ..+++++..+... .--+.+++++..+++++++..+++|=-.++ ..+.+++++++.|+.-.
T Consensus 227 l~----~~r~v~iaaSTH~--GEeei~l~~~~~l~~~~~~~llIlVPRHpE-----------Rf~~v~~l~~~~gl~~~~ 289 (419)
T COG1519 227 LG----GHRPVWVAASTHE--GEEEIILDAHQALKKQFPNLLLILVPRHPE-----------RFKAVENLLKRKGLSVTR 289 (419)
T ss_pred cC----CCCceEEEecCCC--chHHHHHHHHHHHHhhCCCceEEEecCChh-----------hHHHHHHHHHHcCCeEEe
Confidence 33 2378888877732 223558899999999999999999977654 46778888998876310
Q ss_pred -----------EEEcccccCCCChHHHHHHHHccCcE-EEEcCCCCCCCHHHHHHHHcCCCEEecCC----CCccceeec
Q 002909 645 -----------FRWIAAQTDRYRNGELYRCIADTKGA-FVQPALYEAFGLTVIEAMNCGLPTFATNQ----GGPAEIIID 708 (867)
Q Consensus 645 -----------V~flG~~~d~v~~~el~~~la~~aDv-fV~PS~~EgfGltvlEAMa~GlPVIat~~----gG~~EiI~d 708 (867)
=.++| ...+|+..+|.. +|+ ||--|+.+--|--++|+.++|+|||.-.+ ....+-+..
T Consensus 290 rS~~~~~~~~tdV~l~-----DtmGEL~l~y~~-adiAFVGGSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~ 363 (419)
T COG1519 290 RSQGDPPFSDTDVLLG-----DTMGELGLLYGI-ADIAFVGGSLVPIGGHNPLEPAAFGTPVIFGPYTFNFSDIAERLLQ 363 (419)
T ss_pred ecCCCCCCCCCcEEEE-----ecHhHHHHHHhh-ccEEEECCcccCCCCCChhhHHHcCCCEEeCCccccHHHHHHHHHh
Confidence 12233 247899999987 776 66678877667789999999999998643 333333445
Q ss_pred CceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHh
Q 002909 709 GVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYEC 755 (867)
Q Consensus 709 g~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ 755 (867)
.+.|+.++ |.+.+++++..++ .|++.+.+|++++...+.++
T Consensus 364 ~ga~~~v~--~~~~l~~~v~~l~----~~~~~r~~~~~~~~~~v~~~ 404 (419)
T COG1519 364 AGAGLQVE--DADLLAKAVELLL----ADEDKREAYGRAGLEFLAQN 404 (419)
T ss_pred cCCeEEEC--CHHHHHHHHHHhc----CCHHHHHHHHHHHHHHHHHh
Confidence 56788887 5666666665544 88999999999999888543
No 118
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=98.55 E-value=6.1e-07 Score=98.88 Aligned_cols=104 Identities=21% Similarity=0.274 Sum_probs=68.5
Q ss_pred CChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCCccc----eeec-CceEEEeC-------CCCHHH
Q 002909 655 YRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAE----IIID-GVSGFHID-------PNNGDE 722 (867)
Q Consensus 655 v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG~~E----iI~d-g~~G~lv~-------p~d~e~ 722 (867)
++.+|..+ +|.+.|+||+||++|.+..|.-.+|+|-|+|+..|+.- .|++ ..-|+++- .++.++
T Consensus 492 lDYeeFVR----GCHLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~q 567 (692)
T KOG3742|consen 492 LDYEEFVR----GCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQ 567 (692)
T ss_pred CCHHHHhc----cccccccccccCCCCCCchheEEeccccccccccchhhhHHHHhcCchhceEEEEecccCChhhHHHH
Confidence 45566666 79999999999999999999999999999999988654 3433 23466652 123345
Q ss_pred HHHHHHHHHHHhhcCHHHHHHHHH-HHHHHHHHhCCHHHHHHHHHH
Q 002909 723 SSNKIADFFEKCKTDAGYWNQMSA-AGRQRIYECYTWKIYANKVLN 767 (867)
Q Consensus 723 lA~aI~~ll~~~~~dp~~~~~m~~-~ar~~v~~~ysw~~~a~~ll~ 767 (867)
+++-|.++. ....|+++.+ +--++...-.+|+.+..-|.+
T Consensus 568 L~~~m~~F~-----~qsRRQRIiqRNrtErLSdLLDWk~lG~~Y~~ 608 (692)
T KOG3742|consen 568 LASFMYEFC-----KQSRRQRIIQRNRTERLSDLLDWKYLGRYYRK 608 (692)
T ss_pred HHHHHHHHH-----HHHHHHHHHHhcchhhHHHHHhHHHHhHHHHH
Confidence 555555543 2334444443 334555566777766555444
No 119
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=98.35 E-value=4.1e-05 Score=85.21 Aligned_cols=77 Identities=16% Similarity=0.092 Sum_probs=54.9
Q ss_pred CCcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCCccc------eeecCceEEEe
Q 002909 642 QGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAE------IIIDGVSGFHI 715 (867)
Q Consensus 642 ~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG~~E------iI~dg~~G~lv 715 (867)
.+++.+.++.. .++..++.. ||++|.-+- ..++.||+++|+|++.....+..| .+++.+.|..+
T Consensus 228 ~~~v~~~~~~~-----~~~~~~l~~-ad~vI~~~G----~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l 297 (321)
T TIGR00661 228 NENVEIRRITT-----DNFKELIKN-AELVITHGG----FSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIAL 297 (321)
T ss_pred CCCEEEEECCh-----HHHHHHHHh-CCEEEECCC----hHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEc
Confidence 57899888643 367888886 999998752 246999999999999988765434 34556678888
Q ss_pred CCCCHHHHHHHHHH
Q 002909 716 DPNNGDESSNKIAD 729 (867)
Q Consensus 716 ~p~d~e~lA~aI~~ 729 (867)
+..+. ++.+++.+
T Consensus 298 ~~~~~-~~~~~~~~ 310 (321)
T TIGR00661 298 EYKEL-RLLEAILD 310 (321)
T ss_pred ChhhH-HHHHHHHh
Confidence 87666 33334433
No 120
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=98.33 E-value=0.00036 Score=82.50 Aligned_cols=137 Identities=12% Similarity=0.034 Sum_probs=88.3
Q ss_pred CcEEEEEeccCCc-----CChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEc
Q 002909 574 KPIIFSMARLDTV-----KNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWI 648 (867)
Q Consensus 574 k~iIl~vGRL~~~-----Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~fl 648 (867)
..++++.|..... +-+..+++|++++. .++++..++... . .++++||.+.
T Consensus 297 g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~-----~~viw~~~~~~~------------~--------~~~p~Nv~i~ 351 (507)
T PHA03392 297 GVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLP-----YNVLWKYDGEVE------------A--------INLPANVLTQ 351 (507)
T ss_pred cEEEEECCCCCcCCCCCHHHHHHHHHHHHhCC-----CeEEEEECCCcC------------c--------ccCCCceEEe
Confidence 4788889987532 23455666665442 466666654320 0 2467899999
Q ss_pred ccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCC----ccceeecCceEEEeCCC--CHHH
Q 002909 649 AAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEIIIDGVSGFHIDPN--NGDE 722 (867)
Q Consensus 649 G~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG----~~EiI~dg~~G~lv~p~--d~e~ 722 (867)
+|.+ ..++... ..+++||.= |-..++.||+.+|+|+|+....+ .+..++.-+.|..++.. +.++
T Consensus 352 ~w~P----q~~lL~h--p~v~~fItH----GG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~~~~t~~~ 421 (507)
T PHA03392 352 KWFP----QRAVLKH--KNVKAFVTQ----GGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDTVTVSAAQ 421 (507)
T ss_pred cCCC----HHHHhcC--CCCCEEEec----CCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEeccCCcCHHH
Confidence 9744 4455421 137888854 33457999999999999975543 44444556678887754 4578
Q ss_pred HHHHHHHHHHHhhcCHHHHHHHHHHHH
Q 002909 723 SSNKIADFFEKCKTDAGYWNQMSAAGR 749 (867)
Q Consensus 723 lA~aI~~ll~~~~~dp~~~~~m~~~ar 749 (867)
+.++|.+++ .||.++++..+-+.
T Consensus 422 l~~ai~~vl----~~~~y~~~a~~ls~ 444 (507)
T PHA03392 422 LVLAIVDVI----ENPKYRKNLKELRH 444 (507)
T ss_pred HHHHHHHHh----CCHHHHHHHHHHHH
Confidence 888888777 88887766554443
No 121
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=98.33 E-value=5.1e-05 Score=82.89 Aligned_cols=97 Identities=12% Similarity=0.171 Sum_probs=69.8
Q ss_pred CcEEEEEeccCCcCChHHHHHHHHHhHccCCCeEEE-EEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEccccc
Q 002909 574 KPIIFSMARLDTVKNITGLTEWYGKNKRLRNMVNLV-VVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQT 652 (867)
Q Consensus 574 k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~~v~Lv-IVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~ 652 (867)
+.+++++|..++.+....+++++..+. .++++. |+|.+.. ..+++++.++.. ++|++.++.
T Consensus 171 ~~iLi~~GG~d~~~~~~~~l~~l~~~~---~~~~i~vv~G~~~~-----------~~~~l~~~~~~~---~~i~~~~~~- 232 (279)
T TIGR03590 171 RRVLVSFGGADPDNLTLKLLSALAESQ---INISITLVTGSSNP-----------NLDELKKFAKEY---PNIILFIDV- 232 (279)
T ss_pred CeEEEEeCCcCCcCHHHHHHHHHhccc---cCceEEEEECCCCc-----------CHHHHHHHHHhC---CCEEEEeCH-
Confidence 458899999998776667888887653 344443 5565533 134566666553 579988854
Q ss_pred CCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCC
Q 002909 653 DRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQ 699 (867)
Q Consensus 653 d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~ 699 (867)
.++..+|+. ||++|.+ .|.|+.|++++|+|+|+...
T Consensus 233 -----~~m~~lm~~-aDl~Is~-----~G~T~~E~~a~g~P~i~i~~ 268 (279)
T TIGR03590 233 -----ENMAELMNE-ADLAIGA-----AGSTSWERCCLGLPSLAICL 268 (279)
T ss_pred -----HHHHHHHHH-CCEEEEC-----CchHHHHHHHcCCCEEEEEe
Confidence 357777876 9999985 57999999999999998755
No 122
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=98.31 E-value=1.6e-05 Score=91.59 Aligned_cols=183 Identities=13% Similarity=0.078 Sum_probs=119.7
Q ss_pred ccccccccccCCCCcEEEEEeccCCcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcC
Q 002909 561 DNSEHIGYLADRKKPIIFSMARLDTVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQ 640 (867)
Q Consensus 561 ~~~~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~ 640 (867)
..++.+|+ +++..++++..++ .|=-+..++++.++.+.-|+.+|++...... ..+.+++.+++.|
T Consensus 274 ~~R~~~gL--p~d~vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~-----------~~~~l~~~~~~~G 338 (468)
T PF13844_consen 274 TTRAQYGL--PEDAVVFGSFNNL--FKISPETLDLWARILKAVPNSRLWLLRFPAS-----------GEARLRRRFAAHG 338 (468)
T ss_dssp EETGGGT----SSSEEEEE-S-G--GG--HHHHHHHHHHHHHSTTEEEEEEETSTT-----------HHHHHHHHHHHTT
T ss_pred cCHHHcCC--CCCceEEEecCcc--ccCCHHHHHHHHHHHHhCCCcEEEEeeCCHH-----------HHHHHHHHHHHcC
Confidence 35578999 7787777777776 4556888999999988899999998875432 1356788888999
Q ss_pred CC-CcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCCcccee-----e-cCceEE
Q 002909 641 LQ-GQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEII-----I-DGVSGF 713 (867)
Q Consensus 641 L~-~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG~~EiI-----~-dg~~G~ 713 (867)
++ +++.|.+. .+..+..+.+.. +|+++=+..+ +-|.+.+||+.+|+|||+-.-.....=+ . =|-.-+
T Consensus 339 v~~~Ri~f~~~----~~~~ehl~~~~~-~DI~LDT~p~-nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~El 412 (468)
T PF13844_consen 339 VDPDRIIFSPV----APREEHLRRYQL-ADICLDTFPY-NGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPEL 412 (468)
T ss_dssp S-GGGEEEEE-------HHHHHHHGGG--SEEE--SSS---SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGG
T ss_pred CChhhEEEcCC----CCHHHHHHHhhh-CCEEeeCCCC-CCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchh
Confidence 76 78999883 445677777766 9999987443 3478999999999999986432222111 0 122223
Q ss_pred EeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH--hCCHHHHHHHHHHHHh
Q 002909 714 HIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYE--CYTWKIYANKVLNMGS 770 (867)
Q Consensus 714 lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~--~ysw~~~a~~ll~ly~ 770 (867)
+. .|.++..+.-..+. .|++.++++.+.-+++..+ -|+-+.+++.+++.|+
T Consensus 413 IA--~s~~eYv~~Av~La----~D~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~ 465 (468)
T PF13844_consen 413 IA--DSEEEYVEIAVRLA----TDPERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYR 465 (468)
T ss_dssp B---SSHHHHHHHHHHHH----H-HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHH
T ss_pred cC--CCHHHHHHHHHHHh----CCHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHH
Confidence 33 37888888887776 8999999999998887754 4888999999998654
No 123
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=98.26 E-value=0.00014 Score=81.06 Aligned_cols=62 Identities=16% Similarity=0.152 Sum_probs=43.6
Q ss_pred HHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCC---ccceeecCceEEEeCCCCHHHHHHHHHHHH
Q 002909 662 RCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG---PAEIIIDGVSGFHIDPNNGDESSNKIADFF 731 (867)
Q Consensus 662 ~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG---~~EiI~dg~~G~lv~p~d~e~lA~aI~~ll 731 (867)
.+++- ||++|-- -|....||...|+|+|.+..|- .-+.+. +.|.++.-.|++++.+.+....
T Consensus 244 ~Ll~~-a~l~Ig~-----ggTMa~EAA~LGtPaIs~~~g~~~~vd~~L~--~~Gll~~~~~~~ei~~~v~~~~ 308 (335)
T PF04007_consen 244 DLLYY-ADLVIGG-----GGTMAREAALLGTPAISCFPGKLLAVDKYLI--EKGLLYHSTDPDEIVEYVRKNL 308 (335)
T ss_pred HHHHh-cCEEEeC-----CcHHHHHHHHhCCCEEEecCCcchhHHHHHH--HCCCeEecCCHHHHHHHHHHhh
Confidence 44444 8999954 4677899999999999875442 223332 3477888889999888665544
No 124
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=98.24 E-value=6.2e-05 Score=84.76 Aligned_cols=276 Identities=16% Similarity=0.171 Sum_probs=143.5
Q ss_pred HHHHHHHHHcCCCCeEEEECC-CChHHHHHHHHHhcCCcEEEEEcCCcccccccchhhhhhcCccccchhhhhHHHHHHh
Q 002909 397 DATAKILDLMEGKPDLIIGNY-SDGNLVASLMASKLGITQATIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMN 475 (867)
Q Consensus 397 ~~~~~i~~~l~~kPDIIh~h~-~~~~l~a~lla~~~gip~V~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~ 475 (867)
.+...+.+. +||+|..+. ....+.+.++|..++||++..--++-..... .+. .+...+ ..+=+
T Consensus 58 ~~~~~~~~~---~Pd~Vlv~GD~~~~la~alaA~~~~ipv~HieaGlRs~d~~-~g~----~de~~R--------~~i~~ 121 (346)
T PF02350_consen 58 ELADVLERE---KPDAVLVLGDRNEALAAALAAFYLNIPVAHIEAGLRSGDRT-EGM----PDEINR--------HAIDK 121 (346)
T ss_dssp HHHHHHHHH---T-SEEEEETTSHHHHHHHHHHHHTT-EEEEES-----S-TT-SST----THHHHH--------HHHHH
T ss_pred HHHHHHHhc---CCCEEEEEcCCchHHHHHHHHHHhCCCEEEecCCCCccccC-CCC----chhhhh--------hhhhh
Confidence 333444444 999999885 4446778899999999966443332211110 000 011111 11335
Q ss_pred cCCEEEecCHHHHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCC-CCCCCCCCCCchHhhhhccCCcchHH
Q 002909 476 QTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAP-GADQSVYFPYTEKQKRLTSFHPDIEE 554 (867)
Q Consensus 476 ~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpn-GVD~~~f~p~~~~~~r~~~~~~~i~~ 554 (867)
-||.-++.|+..++.+. .-|++ +.++.++-| ++|.-
T Consensus 122 la~lhf~~t~~~~~~L~--------------------~~G~~--~~rI~~vG~~~~D~l--------------------- 158 (346)
T PF02350_consen 122 LAHLHFAPTEEARERLL--------------------QEGEP--PERIFVVGNPGIDAL--------------------- 158 (346)
T ss_dssp H-SEEEESSHHHHHHHH--------------------HTT----GGGEEE---HHHHHH---------------------
T ss_pred hhhhhccCCHHHHHHHH--------------------hcCCC--CCeEEEEChHHHHHH---------------------
Confidence 68999999987765322 23665 678888765 44421
Q ss_pred hhhccccccccc---ccccCCCCcEEE-EEeccCC---cCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHH
Q 002909 555 LLYSKEDNSEHI---GYLADRKKPIIF-SMARLDT---VKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIA 627 (867)
Q Consensus 555 ~l~~~~~~~~~l---Gll~~~~k~iIl-~vGRL~~---~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~ 627 (867)
+..+....+.+ +++....+++++ +.=|... ......+.+++..+.+. +++.+++.....+ .
T Consensus 159 -~~~~~~~~~~~~~~~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~-~~~~vi~~~hn~p----------~ 226 (346)
T PF02350_consen 159 -LQNKEEIEEKYKNSGILQDAPKPYILVTLHPVTNEDNPERLEQILEALKALAER-QNVPVIFPLHNNP----------R 226 (346)
T ss_dssp -HHHHHTTCC-HHHHHHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHH-TTEEEEEE--S-H----------H
T ss_pred -HHhHHHHhhhhhhHHHHhccCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhc-CCCcEEEEecCCc----------h
Confidence 00000000111 221123444444 4433332 34567788888888776 6898888887543 2
Q ss_pred HHHHHHHHHHHcCCCCcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHH-HHHHcCCCEEecCC-CCccce
Q 002909 628 EIKKMHTLIEKYQLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVI-EAMNCGLPTFATNQ-GGPAEI 705 (867)
Q Consensus 628 ~~~~l~~li~~~~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvl-EAMa~GlPVIat~~-gG~~Ei 705 (867)
....+.+..+++ ++++++. .....+++.++.. |+++|-=| | .+. ||.++|+|||.-.. |--.+.
T Consensus 227 ~~~~i~~~l~~~---~~v~~~~----~l~~~~~l~ll~~-a~~vvgdS-----s-GI~eEa~~lg~P~v~iR~~geRqe~ 292 (346)
T PF02350_consen 227 GSDIIIEKLKKY---DNVRLIE----PLGYEEYLSLLKN-ADLVVGDS-----S-GIQEEAPSLGKPVVNIRDSGERQEG 292 (346)
T ss_dssp HHHHHHHHHTT----TTEEEE--------HHHHHHHHHH-ESEEEESS-----H-HHHHHGGGGT--EEECSSS-S-HHH
T ss_pred HHHHHHHHhccc---CCEEEEC----CCCHHHHHHHHhc-ceEEEEcC-----c-cHHHHHHHhCCeEEEecCCCCCHHH
Confidence 334455445544 3899988 4667899999987 88887543 5 677 99999999999854 555666
Q ss_pred eecCceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 002909 706 IIDGVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKVLNM 768 (867)
Q Consensus 706 I~dg~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll~l 768 (867)
+..+.+-+ +. .|.+++.++|.+++ .+++.+.++.. ...-|.=...++++.++
T Consensus 293 r~~~~nvl-v~-~~~~~I~~ai~~~l----~~~~~~~~~~~-----~~npYgdG~as~rI~~~ 344 (346)
T PF02350_consen 293 RERGSNVL-VG-TDPEAIIQAIEKAL----SDKDFYRKLKN-----RPNPYGDGNASERIVEI 344 (346)
T ss_dssp HHTTSEEE-ET-SSHHHHHHHHHHHH----H-HHHHHHHHC-----S--TT-SS-HHHHHHHH
T ss_pred HhhcceEE-eC-CCHHHHHHHHHHHH----hChHHHHhhcc-----CCCCCCCCcHHHHHHHh
Confidence 65565544 65 79999999998887 55444444321 12345545555555553
No 125
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=98.08 E-value=0.00035 Score=79.03 Aligned_cols=144 Identities=19% Similarity=0.242 Sum_probs=91.3
Q ss_pred CCCCcEEEE-Ee-ccCCc-CChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEE
Q 002909 571 DRKKPIIFS-MA-RLDTV-KNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRW 647 (867)
Q Consensus 571 ~~~k~iIl~-vG-RL~~~-Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~f 647 (867)
++++++|.. .| |-.+. +.+..+++++..+.+.+|++++++...... ..+.+.+.....+..-.+.+
T Consensus 181 ~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~l~fvvp~a~~~-----------~~~~i~~~~~~~~~~~~~~~ 249 (373)
T PF02684_consen 181 DPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPDLQFVVPVAPEV-----------HEELIEEILAEYPPDVSIVI 249 (373)
T ss_pred CCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCHH-----------HHHHHHHHHHhhCCCCeEEE
Confidence 556665544 44 55554 456889999999999999999998875432 12334555555554434443
Q ss_pred cccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCCc-----------------cceeecC-
Q 002909 648 IAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP-----------------AEIIIDG- 709 (867)
Q Consensus 648 lG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG~-----------------~EiI~dg- 709 (867)
.. ++-+..++. ||+.+..| |.+.+|++.+|+|.|+.--... ..++.+.
T Consensus 250 ~~--------~~~~~~m~~-ad~al~~S-----GTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~ 315 (373)
T PF02684_consen 250 IE--------GESYDAMAA-ADAALAAS-----GTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGRE 315 (373)
T ss_pred cC--------CchHHHHHh-CcchhhcC-----CHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCC
Confidence 32 245777776 99888765 8999999999999998643222 1222110
Q ss_pred -ceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHH
Q 002909 710 -VSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQ 743 (867)
Q Consensus 710 -~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~ 743 (867)
..=++-+.-+++.+++++..++ .|++.++.
T Consensus 316 v~PEliQ~~~~~~~i~~~~~~ll----~~~~~~~~ 346 (373)
T PF02684_consen 316 VVPELIQEDATPENIAAELLELL----ENPEKRKK 346 (373)
T ss_pred cchhhhcccCCHHHHHHHHHHHh----cCHHHHHH
Confidence 0011223457888898888887 77766433
No 126
>PLN02448 UDP-glycosyltransferase family protein
Probab=97.91 E-value=0.0057 Score=71.67 Aligned_cols=138 Identities=10% Similarity=0.078 Sum_probs=77.3
Q ss_pred CCcEEEEEeccCC--cCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEccc
Q 002909 573 KKPIIFSMARLDT--VKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAA 650 (867)
Q Consensus 573 ~k~iIl~vGRL~~--~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~ 650 (867)
...++++.|.... .+-+..+++++... +..++++..+.. ..+.+.. .+++.+.+|
T Consensus 274 ~~vvyvsfGs~~~~~~~~~~~~~~~l~~~-----~~~~lw~~~~~~-------------~~~~~~~-----~~~~~v~~w 330 (459)
T PLN02448 274 GSVLYVSLGSFLSVSSAQMDEIAAGLRDS-----GVRFLWVARGEA-------------SRLKEIC-----GDMGLVVPW 330 (459)
T ss_pred CceEEEeecccccCCHHHHHHHHHHHHhC-----CCCEEEEEcCch-------------hhHhHhc-----cCCEEEecc
Confidence 4467788887643 22244445554433 457777654321 1111111 246777776
Q ss_pred ccCCCChHHHHHHHHccCcE--EEEcCCCCCCCHHHHHHHHcCCCEEecCCCC----ccceeecC-ceEEEeCC------
Q 002909 651 QTDRYRNGELYRCIADTKGA--FVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEIIIDG-VSGFHIDP------ 717 (867)
Q Consensus 651 ~~d~v~~~el~~~la~~aDv--fV~PS~~EgfGltvlEAMa~GlPVIat~~gG----~~EiI~dg-~~G~lv~p------ 717 (867)
.+ ..++.. ..++ ||.= +--.+++||+++|+|+|+-...+ .+..+.+. +.|+-+..
T Consensus 331 ~p----Q~~iL~----h~~v~~fvtH----gG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~ 398 (459)
T PLN02448 331 CD----QLKVLC----HSSVGGFWTH----CGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEET 398 (459)
T ss_pred CC----HHHHhc----cCccceEEec----CchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccccCC
Confidence 43 456655 2444 5532 22348999999999999976543 34444442 45666631
Q ss_pred -CCHHHHHHHHHHHHHHhhcCH-HHHHHHHHHHH
Q 002909 718 -NNGDESSNKIADFFEKCKTDA-GYWNQMSAAGR 749 (867)
Q Consensus 718 -~d~e~lA~aI~~ll~~~~~dp-~~~~~m~~~ar 749 (867)
-+.+++++++.+++ .++ +..++|.+++.
T Consensus 399 ~~~~~~l~~av~~vl----~~~~~~~~~~r~~a~ 428 (459)
T PLN02448 399 LVGREEIAELVKRFM----DLESEEGKEMRRRAK 428 (459)
T ss_pred cCcHHHHHHHHHHHh----cCCchhHHHHHHHHH
Confidence 26688888888887 553 33344444443
No 127
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=97.91 E-value=0.0011 Score=76.30 Aligned_cols=155 Identities=14% Similarity=0.081 Sum_probs=100.9
Q ss_pred CCCcEEEEEeccCCcCChHHHHHH-HHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEccc
Q 002909 572 RKKPIIFSMARLDTVKNITGLTEW-YGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAA 650 (867)
Q Consensus 572 ~~k~iIl~vGRL~~~Kgid~LieA-~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~ 650 (867)
+.+++.++.|..... ..+++. +..+.+ -++++++..++.+ . ..-++++|+...++
T Consensus 236 d~~~vyvslGt~~~~---~~l~~~~~~a~~~--l~~~vi~~~~~~~------------------~-~~~~~p~n~~v~~~ 291 (406)
T COG1819 236 DRPIVYVSLGTVGNA---VELLAIVLEALAD--LDVRVIVSLGGAR------------------D-TLVNVPDNVIVADY 291 (406)
T ss_pred CCCeEEEEcCCcccH---HHHHHHHHHHHhc--CCcEEEEeccccc------------------c-ccccCCCceEEecC
Confidence 344566677776654 333333 333333 2577777776522 0 22357889999885
Q ss_pred ccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCC----ccceeecCceEEEeC--CCCHHHHH
Q 002909 651 QTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEIIIDGVSGFHID--PNNGDESS 724 (867)
Q Consensus 651 ~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG----~~EiI~dg~~G~lv~--p~d~e~lA 724 (867)
++..++.. .||++|+. -|+ .++.||+.+|+|+|+-..++ .++.+++-+.|..+. ..+.+.++
T Consensus 292 ----~p~~~~l~----~ad~vI~h---GG~-gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l~~~~l~~~~l~ 359 (406)
T COG1819 292 ----VPQLELLP----RADAVIHH---GGA-GTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIALPFEELTEERLR 359 (406)
T ss_pred ----CCHHHHhh----hcCEEEec---CCc-chHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceecCcccCCHHHHH
Confidence 44556555 59999988 334 46999999999999975542 455566677888876 67899999
Q ss_pred HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 002909 725 NKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKVLN 767 (867)
Q Consensus 725 ~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll~ 767 (867)
++|.+++ .|+.+++...+.. +.+.+.-.-+..++.+++
T Consensus 360 ~av~~vL----~~~~~~~~~~~~~-~~~~~~~g~~~~a~~le~ 397 (406)
T COG1819 360 AAVNEVL----ADDSYRRAAERLA-EEFKEEDGPAKAADLLEE 397 (406)
T ss_pred HHHHHHh----cCHHHHHHHHHHH-HHhhhcccHHHHHHHHHH
Confidence 9998888 8887766554443 334345555555555555
No 128
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.68 E-value=0.0033 Score=69.78 Aligned_cols=116 Identities=11% Similarity=0.098 Sum_probs=87.4
Q ss_pred CcEEEcccccCCCChHHHHHHHHccCcEEEEcCC---CCC---CCHHHHHHHHcCCCEEecCCCCccceeecCceEEEeC
Q 002909 643 GQFRWIAAQTDRYRNGELYRCIADTKGAFVQPAL---YEA---FGLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHID 716 (867)
Q Consensus 643 ~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~---~Eg---fGltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~ 716 (867)
+++..+|+... .+.+...+.- .++++.-++ .++ +.+-+.|+|+||.|.++....+..-.+.+|..-.+..
T Consensus 237 ~~~~yIg~~~~---~~~v~~~~~~-~~~~~n~~r~~~~~~l~~~~~RvFeiagc~~~liT~~~~~~e~~f~pgk~~iv~~ 312 (373)
T COG4641 237 PNVQYIGYYNP---KDGVPNAFKR-DDVTLNINRASIANALFSPTNRVFEIAGCGGFLITDYWKDLEKFFKPGKDIIVYQ 312 (373)
T ss_pred chhhhhhccCc---cchhhhcccc-cceeeeecHHHHHhhcCCchhhHHHHhhcCCccccccHHHHHHhcCCchheEEec
Confidence 45666665333 2344444443 666655333 222 3678999999999999998888888888887766655
Q ss_pred CCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 002909 717 PNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKVLNM 768 (867)
Q Consensus 717 p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll~l 768 (867)
|..++.+++..++ ..++.++++.+.|++++...||.+.-+..++..
T Consensus 313 --d~kdl~~~~~yll----~h~~erkeiae~~ye~V~~~ht~~~r~~~~~~~ 358 (373)
T COG4641 313 --DSKDLKEKLKYLL----NHPDERKEIAECAYERVLARHTYEERIFKLLNE 358 (373)
T ss_pred --CHHHHHHHHHHHh----cCcchHHHHHHhhHHHHHHhccHHHHHHHHHHH
Confidence 9999999998888 888899999999999999999988777666663
No 129
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=97.67 E-value=0.00063 Score=78.60 Aligned_cols=180 Identities=15% Similarity=0.171 Sum_probs=122.9
Q ss_pred cccccccCCCCcEEEEEeccCCcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCC-
Q 002909 564 EHIGYLADRKKPIIFSMARLDTVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQ- 642 (867)
Q Consensus 564 ~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~- 642 (867)
+.+|+ +++..++++.++. .|-...+++-..++.+.-|+-.|++.|+|+++ .....+++++++.|++
T Consensus 422 ~~lgl--p~~avVf~c~~n~--~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~~---------~~~~~l~~la~~~Gv~~ 488 (620)
T COG3914 422 AQLGL--PEDAVVFCCFNNY--FKITPEVFALWMQILSAVPNSVLLLKAGGDDA---------EINARLRDLAEREGVDS 488 (620)
T ss_pred hhcCC--CCCeEEEEecCCc--ccCCHHHHHHHHHHHHhCCCcEEEEecCCCcH---------HHHHHHHHHHHHcCCCh
Confidence 67888 7777777777665 34444555544455556799999999998652 4457789999999974
Q ss_pred CcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEec-------CCCCccceee-cCceEEE
Q 002909 643 GQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT-------NQGGPAEIII-DGVSGFH 714 (867)
Q Consensus 643 ~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat-------~~gG~~EiI~-dg~~G~l 714 (867)
.+++|.+. .++++....|.- ||+|+=+-.|-| +.|.+||+.+|+||++- ..|+. ++. -|..-++
T Consensus 489 eRL~f~p~----~~~~~h~a~~~i-ADlvLDTyPY~g-~TTa~daLwm~vPVlT~~G~~FasR~~~s--i~~~agi~e~v 560 (620)
T COG3914 489 ERLRFLPP----APNEDHRARYGI-ADLVLDTYPYGG-HTTASDALWMGVPVLTRVGEQFASRNGAS--IATNAGIPELV 560 (620)
T ss_pred hheeecCC----CCCHHHHHhhch-hheeeecccCCC-ccchHHHHHhcCceeeeccHHHHHhhhHH--HHHhcCCchhh
Confidence 78999994 445566666665 999997655444 56899999999999964 22221 111 1333334
Q ss_pred eCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH--hCCHHHHHHHHHHHHh
Q 002909 715 IDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYE--CYTWKIYANKVLNMGS 770 (867)
Q Consensus 715 v~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~--~ysw~~~a~~ll~ly~ 770 (867)
.+ +.++..++-..+= .|...+++.+..-.+.... -|+-+.+++++.++|.
T Consensus 561 A~--s~~dYV~~av~~g----~dral~q~~r~~l~~~r~tspL~d~~~far~le~~y~ 612 (620)
T COG3914 561 AD--SRADYVEKAVAFG----SDRALRQQVRAELKRSRQTSPLFDPKAFARKLETLYW 612 (620)
T ss_pred cC--CHHHHHHHHHHhc----ccHHHHHhhHHHHHhccccCcccCHHHHHHHHHHHHH
Confidence 43 5666666555554 7887788777666655544 5889999999999753
No 130
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=97.64 E-value=0.0027 Score=70.83 Aligned_cols=201 Identities=18% Similarity=0.164 Sum_probs=115.3
Q ss_pred CCCCeEEEECC-CChHHHHHHHHHhcC--CcEEEEEcCCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEec
Q 002909 407 EGKPDLIIGNY-SDGNLVASLMASKLG--ITQATIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITS 483 (867)
Q Consensus 407 ~~kPDIIh~h~-~~~~l~a~lla~~~g--ip~V~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~ 483 (867)
..+||++++-. ++.|+-.....++.+ +|+|+.+-- . -+-|+.-. -....+.+|++.+.
T Consensus 83 ~~kpD~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~P---s-----VWAWr~~R-----------a~~i~~~~D~lLai 143 (381)
T COG0763 83 ANKPDVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVSP---S-----VWAWRPKR-----------AVKIAKYVDHLLAI 143 (381)
T ss_pred hcCCCEEEEeCCCCCchHHHHHHHHhCCCCCeEEEECc---c-----eeeechhh-----------HHHHHHHhhHeeee
Confidence 46999999764 555665444445555 888765531 1 12232211 11245789999998
Q ss_pred CHHHHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCC-CCCCCCCCCchHhhhhccCCcchHHhhhccccc
Q 002909 484 TYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPG-ADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDN 562 (867)
Q Consensus 484 S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnG-VD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~ 562 (867)
=+-|.+-.++ .|+ ..+.|-+. +|.-.+.+.... .
T Consensus 144 lPFE~~~y~k--------------------~g~-----~~~yVGHpl~d~i~~~~~r~~--------------------a 178 (381)
T COG0763 144 LPFEPAFYDK--------------------FGL-----PCTYVGHPLADEIPLLPDREA--------------------A 178 (381)
T ss_pred cCCCHHHHHh--------------------cCC-----CeEEeCChhhhhccccccHHH--------------------H
Confidence 8766542111 122 13444332 232222232222 1
Q ss_pred ccccccccCCCCcE-EEEEe-ccCC-cCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHc
Q 002909 563 SEHIGYLADRKKPI-IFSMA-RLDT-VKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKY 639 (867)
Q Consensus 563 ~~~lGll~~~~k~i-Il~vG-RL~~-~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~ 639 (867)
++.+|+ +.++++ .+..| |-.+ .+.+..+++++..++++.|+.++++--.... .+.+.....+.
T Consensus 179 r~~l~~--~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~~vlp~~~~~------------~~~~~~~~~~~ 244 (381)
T COG0763 179 REKLGI--DADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLKFVLPLVNAK------------YRRIIEEALKW 244 (381)
T ss_pred HHHhCC--CCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCceEEEecCcHH------------HHHHHHHHhhc
Confidence 256777 555554 44445 4443 4567888999999998999999998776532 22233222222
Q ss_pred C-CCCcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCC
Q 002909 640 Q-LQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQ 699 (867)
Q Consensus 640 ~-L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~ 699 (867)
. ...++...+ ++-+..+++ ||+.+..| |.+.+|+|.+|+|.|++.-
T Consensus 245 ~~~~~~~~~~~--------~~~~~a~~~-aD~al~aS-----GT~tLE~aL~g~P~Vv~Yk 291 (381)
T COG0763 245 EVAGLSLILID--------GEKRKAFAA-ADAALAAS-----GTATLEAALAGTPMVVAYK 291 (381)
T ss_pred cccCceEEecC--------chHHHHHHH-hhHHHHhc-----cHHHHHHHHhCCCEEEEEe
Confidence 2 112233322 355666665 89877664 8999999999999998743
No 131
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=97.46 E-value=0.12 Score=60.03 Aligned_cols=96 Identities=19% Similarity=0.204 Sum_probs=56.3
Q ss_pred HHHHHHcCCCCcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCC----CCccceeec
Q 002909 633 HTLIEKYQLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQ----GGPAEIIID 708 (867)
Q Consensus 633 ~~li~~~~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~----gG~~EiI~d 708 (867)
+++.+.+.-+.+++.+.. .....|+..+++. ||++|-.-. -.++=|+++|+|+|+-.. -|+.+.+
T Consensus 297 ~~l~~~~~~~~~~~vi~~---~~~~~e~~~iIs~-~dl~ig~Rl-----Ha~I~a~~~gvP~i~i~Y~~K~~~~~~~l-- 365 (426)
T PRK10017 297 LNLRQHVSDPARYHVVMD---ELNDLEMGKILGA-CELTVGTRL-----HSAIISMNFGTPAIAINYEHKSAGIMQQL-- 365 (426)
T ss_pred HHHHHhcccccceeEecC---CCChHHHHHHHhh-CCEEEEecc-----hHHHHHHHcCCCEEEeeehHHHHHHHHHc--
Confidence 344444443444554331 1234588888887 999886532 256779999999999654 2333333
Q ss_pred CceEEEeC--CCCHHHHHHHHHHHHHHhhcCHHHHHH
Q 002909 709 GVSGFHID--PNNGDESSNKIADFFEKCKTDAGYWNQ 743 (867)
Q Consensus 709 g~~G~lv~--p~d~e~lA~aI~~ll~~~~~dp~~~~~ 743 (867)
|...++++ .-+.+++.+.+.+++ +|.+..++
T Consensus 366 g~~~~~~~~~~l~~~~Li~~v~~~~----~~r~~~~~ 398 (426)
T PRK10017 366 GLPEMAIDIRHLLDGSLQAMVADTL----GQLPALNA 398 (426)
T ss_pred CCccEEechhhCCHHHHHHHHHHHH----hCHHHHHH
Confidence 33334443 334566777776666 77655443
No 132
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=97.42 E-value=0.0027 Score=77.46 Aligned_cols=143 Identities=16% Similarity=0.085 Sum_probs=103.4
Q ss_pred ccccccCCCCcEEEEEeccCCcCChHH----HHHHHHHhHccC----CCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHH
Q 002909 565 HIGYLADRKKPIIFSMARLDTVKNITG----LTEWYGKNKRLR----NMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLI 636 (867)
Q Consensus 565 ~lGll~~~~k~iIl~vGRL~~~Kgid~----LieA~~~l~~~~----~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li 636 (867)
..|+..+++...++++-|+..+|.... .++.+.++++.- ...++++.|...+ .+......++.+..++
T Consensus 521 ~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP----~y~~aK~iIklI~~va 596 (797)
T cd04300 521 TTGVEVDPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAP----GYYMAKLIIKLINAVA 596 (797)
T ss_pred HhCCccCCCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCC----CcHHHHHHHHHHHHHH
Confidence 446666889999999999999999988 445555565421 1245555554433 3555556666666666
Q ss_pred HHcC----CCC--cEEEcccccCCCChHHHHHHHHccCcEEEEcCC--CCCCCHHHHHHHHcCCCEEecCCCCccceeec
Q 002909 637 EKYQ----LQG--QFRWIAAQTDRYRNGELYRCIADTKGAFVQPAL--YEAFGLTVIEAMNCGLPTFATNQGGPAEIIID 708 (867)
Q Consensus 637 ~~~~----L~~--~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~--~EgfGltvlEAMa~GlPVIat~~gG~~EiI~d 708 (867)
+..+ +.+ +|.|+.- .+. .+.+.+-.+||+-.+-|. .|+.|..=+=+|.-|.++++|--|...|+.++
T Consensus 597 ~~in~Dp~v~~~lkVVFlen----Y~V-slAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~ 671 (797)
T cd04300 597 DVVNNDPDVGDKLKVVFLPN----YNV-SLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEE 671 (797)
T ss_pred HHhccChhcCCceEEEEeCC----CCh-HHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHH
Confidence 6422 344 6888762 222 455555557999998776 89999999999999999999999999999976
Q ss_pred --CceEEEeC
Q 002909 709 --GVSGFHID 716 (867)
Q Consensus 709 --g~~G~lv~ 716 (867)
++|+|+|-
T Consensus 672 vG~eN~fiFG 681 (797)
T cd04300 672 VGEENIFIFG 681 (797)
T ss_pred hCcCcEEEeC
Confidence 78999984
No 133
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=97.40 E-value=0.0014 Score=66.05 Aligned_cols=110 Identities=19% Similarity=0.212 Sum_probs=60.7
Q ss_pred HHHHHHHHcCCCCeEEEECCCChHHHHHHHHHhc-CCcEEEE----EcCCcccccccchhhhhhcCccccchhhhhHHHH
Q 002909 398 ATAKILDLMEGKPDLIIGNYSDGNLVASLMASKL-GITQATI----AHALEKSKYEDSDAKWKELDPKYHFSCQFTADLI 472 (867)
Q Consensus 398 ~~~~i~~~l~~kPDIIh~h~~~~~l~a~lla~~~-gip~V~t----~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~i 472 (867)
++..+++. +..||||++|..++. +..+..-. ++|++.. +|........+... -.......+...+-.....
T Consensus 56 a~~~L~~~-Gf~PDvI~~H~GWGe--~Lflkdv~P~a~li~Y~E~~y~~~g~d~~FDpe~-p~~~~~~~~~r~rN~~~l~ 131 (171)
T PF12000_consen 56 AARQLRAQ-GFVPDVIIAHPGWGE--TLFLKDVFPDAPLIGYFEFYYRASGADVGFDPEF-PPSLDDRARLRMRNAHNLL 131 (171)
T ss_pred HHHHHHHc-CCCCCEEEEcCCcch--hhhHHHhCCCCcEEEEEEEEecCCCCcCCCCCCC-CCCHHHHHHHHHHhHHHHH
Confidence 34444444 789999999988773 23344444 7787632 22211111000000 0011111222223334556
Q ss_pred HHhcCCEEEecCHHHHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCC
Q 002909 473 AMNQTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVY 535 (867)
Q Consensus 473 al~~aD~IIa~S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f 535 (867)
++..||..|+.|.-.+. +.|. .+.+||.||+-|||++.+
T Consensus 132 ~l~~~D~~isPT~wQ~~---------------~fP~---------~~r~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 132 ALEQADAGISPTRWQRS---------------QFPA---------EFRSKISVIHDGIDTDRF 170 (171)
T ss_pred HHHhCCcCcCCCHHHHH---------------hCCH---------HHHcCcEEeecccchhhc
Confidence 88999999999976544 1121 126799999999998765
No 134
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=97.39 E-value=0.014 Score=69.41 Aligned_cols=244 Identities=15% Similarity=0.119 Sum_probs=130.8
Q ss_pred CCCCeEEEE-CCCChHHHHHHHHHhcCC--cEEEEEcCCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEec
Q 002909 407 EGKPDLIIG-NYSDGNLVASLMASKLGI--TQATIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITS 483 (867)
Q Consensus 407 ~~kPDIIh~-h~~~~~l~a~lla~~~gi--p~V~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~ 483 (867)
..+||++++ -+++.|+-....+++.|+ |+++.+- ++- ..|+.- +- +..-+..|.++|.
T Consensus 308 ~~kPD~vIlID~PgFNlrLAK~lkk~Gi~ipviyYVs---PqV-----WAWR~~--Ri---------kki~k~vD~ll~I 368 (608)
T PRK01021 308 KTNPRTVICIDFPDFHFLLIKKLRKRGYKGKIVHYVC---PSI-----WAWRPK--RK---------TILEKYLDLLLLI 368 (608)
T ss_pred hcCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEEC---ccc-----eeeCcc--hH---------HHHHHHhhhheec
Confidence 359999996 466668866666677885 8775542 111 122211 10 1134668888888
Q ss_pred CHHHHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCC-CCCCCCCCchHhhhhccCCcchHHhhhccccc
Q 002909 484 TYQEIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGA-DQSVYFPYTEKQKRLTSFHPDIEELLYSKEDN 562 (867)
Q Consensus 484 S~~~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGV-D~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~ 562 (867)
=+-|.+ +|+ .+|++ +..|-+.. |.-...+..+. .
T Consensus 369 fPFE~~-------------------~y~-~~gv~-----v~yVGHPL~d~i~~~~~~~~--------------------~ 403 (608)
T PRK01021 369 LPFEQN-------------------LFK-DSPLR-----TVYLGHPLVETISSFSPNLS--------------------W 403 (608)
T ss_pred CccCHH-------------------HHH-hcCCC-----eEEECCcHHhhcccCCCHHH--------------------H
Confidence 776554 121 12333 44444433 33111111111 1
Q ss_pred ccccccccCCCCcEE-EEEe-ccCC-cCChHHHHHHHH--HhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHH
Q 002909 563 SEHIGYLADRKKPII-FSMA-RLDT-VKNITGLTEWYG--KNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIE 637 (867)
Q Consensus 563 ~~~lGll~~~~k~iI-l~vG-RL~~-~Kgid~LieA~~--~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~ 637 (867)
++++|+ ++++++| +..| |-.+ .+.+..+++++. .+.+ +.++++.... . ...+.+++..+
T Consensus 404 r~~lgl--~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~~---~l~fvvp~a~-~----------~~~~~i~~~~~ 467 (608)
T PRK01021 404 KEQLHL--PSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLAS---THQLLVSSAN-P----------KYDHLILEVLQ 467 (608)
T ss_pred HHHcCC--CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhcc---CeEEEEecCc-h----------hhHHHHHHHHh
Confidence 245676 5565655 4444 5544 456788888887 4433 5777664332 1 11234444444
Q ss_pred HcCCCCcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCC----------------
Q 002909 638 KYQLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG---------------- 701 (867)
Q Consensus 638 ~~~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG---------------- 701 (867)
..+. -.+.++.. .+-+..+++ ||+.+..| |.+.+|++.+|+|.|+.-..+
T Consensus 468 ~~~~-~~~~ii~~-------~~~~~~m~a-aD~aLaaS-----GTaTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~ 533 (608)
T PRK01021 468 QEGC-LHSHIVPS-------QFRYELMRE-CDCALAKC-----GTIVLETALNQTPTIVTCQLRPFDTFLAKYIFKIILP 533 (608)
T ss_pred hcCC-CCeEEecC-------cchHHHHHh-cCeeeecC-----CHHHHHHHHhCCCEEEEEecCHHHHHHHHHHHhccCC
Confidence 3321 12343321 112566666 99998875 999999999999999853222
Q ss_pred ---ccceeecCc--eEEE--eCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHH
Q 002909 702 ---PAEIIIDGV--SGFH--IDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGR 749 (867)
Q Consensus 702 ---~~EiI~dg~--~G~l--v~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar 749 (867)
.+.++.+.. -=++ =+.-+++.+++++ +++ .|++.++++.+...
T Consensus 534 yIsLpNIIagr~VvPEllqgQ~~~tpe~La~~l-~lL----~d~~~r~~~~~~l~ 583 (608)
T PRK01021 534 AYSLPNIILGSTIFPEFIGGKKDFQPEEVAAAL-DIL----KTSQSKEKQKDACR 583 (608)
T ss_pred eeehhHHhcCCCcchhhcCCcccCCHHHHHHHH-HHh----cCHHHHHHHHHHHH
Confidence 111121110 0111 0234688888875 666 78877766655443
No 135
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=97.37 E-value=0.033 Score=62.57 Aligned_cols=274 Identities=13% Similarity=0.166 Sum_probs=159.7
Q ss_pred CCCeEEEECC-CChHHHHHHHHHhcCCcEEEEEcCCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHH
Q 002909 408 GKPDLIIGNY-SDGNLVASLMASKLGITQATIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQ 486 (867)
Q Consensus 408 ~kPDIIh~h~-~~~~l~a~lla~~~gip~V~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~ 486 (867)
.+||+|..|. ..+.++++++|.+.+||+.+.--++-... .+| .... ...+.=.-||.-++.|..
T Consensus 91 ~kPD~VlVhGDT~t~lA~alaa~~~~IpV~HvEAGlRt~~-----~~~---------PEE~-NR~l~~~~S~~hfapte~ 155 (383)
T COG0381 91 EKPDLVLVHGDTNTTLAGALAAFYLKIPVGHVEAGLRTGD-----LYF---------PEEI-NRRLTSHLSDLHFAPTEI 155 (383)
T ss_pred hCCCEEEEeCCcchHHHHHHHHHHhCCceEEEecccccCC-----CCC---------cHHH-HHHHHHHhhhhhcCChHH
Confidence 4999998885 34456778899999999987654432111 111 0100 001122346666777766
Q ss_pred HHhhcCCCCCccccccccccccceeeeccCCCCCCcEEEeCCCCCCCCCCCCchHhhhhccCCcchHHhhhcccccccc-
Q 002909 487 EIAGSKDRPGQYESHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTSFHPDIEELLYSKEDNSEH- 565 (867)
Q Consensus 487 ~~~~~k~~~gqY~s~~~~~lp~l~~v~~GI~~~~~ki~VIpnGVD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~- 565 (867)
.++.+ ..-|++ +.++.|+-|-+-. ...-. ..+.. .. .+....
T Consensus 156 ar~nL--------------------l~EG~~--~~~IfvtGnt~iD-al~~~---~~~~~---~~--------~~~~~~~ 198 (383)
T COG0381 156 ARKNL--------------------LREGVP--EKRIFVTGNTVID-ALLNT---RDRVL---ED--------SKILAKG 198 (383)
T ss_pred HHHHH--------------------HHcCCC--ccceEEeCChHHH-HHHHH---Hhhhc---cc--------hhhHHhh
Confidence 55421 223665 6678888774421 11000 00000 00 000011
Q ss_pred cccccCCCCcEEEEEeccCCc-CChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHH-HHcCCCC
Q 002909 566 IGYLADRKKPIIFSMARLDTV-KNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLI-EKYQLQG 643 (867)
Q Consensus 566 lGll~~~~k~iIl~vGRL~~~-Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li-~~~~L~~ 643 (867)
++. ..++.++++.=|-... +++..+++++.++.+.++++.++.--... ..+++.. +.++-..
T Consensus 199 ~~~--~~~~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~viyp~H~~--------------~~v~e~~~~~L~~~~ 262 (383)
T COG0381 199 LDD--KDKKYILVTAHRRENVGEPLEEICEALREIAEEYPDVIVIYPVHPR--------------PRVRELVLKRLKNVE 262 (383)
T ss_pred hcc--ccCcEEEEEcchhhcccccHHHHHHHHHHHHHhCCCceEEEeCCCC--------------hhhhHHHHHHhCCCC
Confidence 111 2334455555555443 99999999999999888777665443321 2233333 4556566
Q ss_pred cEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCC-CCccceeecCceEEEeCCCCHHH
Q 002909 644 QFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQ-GGPAEIIIDGVSGFHIDPNNGDE 722 (867)
Q Consensus 644 ~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~-gG~~EiI~dg~~G~lv~p~d~e~ 722 (867)
+|.++. .+...++..++.. | .++++ -.|-..=||-..|+||++-+. ..-+|.++.| +-.++ ..+.+.
T Consensus 263 ~v~li~----pl~~~~f~~L~~~-a-~~ilt----DSGgiqEEAp~lg~Pvl~lR~~TERPE~v~ag-t~~lv-g~~~~~ 330 (383)
T COG0381 263 RVKLID----PLGYLDFHNLMKN-A-FLILT----DSGGIQEEAPSLGKPVLVLRDTTERPEGVEAG-TNILV-GTDEEN 330 (383)
T ss_pred cEEEeC----CcchHHHHHHHHh-c-eEEEe----cCCchhhhHHhcCCcEEeeccCCCCccceecC-ceEEe-CccHHH
Confidence 799887 4666777777766 5 44443 225558999999999999754 4456666443 44455 457788
Q ss_pred HHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Q 002909 723 SSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKVLNMGS 770 (867)
Q Consensus 723 lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll~ly~ 770 (867)
+.+++..++ ++++..++|+... ..|.=...++++.++..
T Consensus 331 i~~~~~~ll----~~~~~~~~m~~~~-----npYgdg~as~rIv~~l~ 369 (383)
T COG0381 331 ILDAATELL----EDEEFYERMSNAK-----NPYGDGNASERIVEILL 369 (383)
T ss_pred HHHHHHHHh----hChHHHHHHhccc-----CCCcCcchHHHHHHHHH
Confidence 888888877 8888888876544 55665556666666433
No 136
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=97.28 E-value=0.042 Score=60.08 Aligned_cols=167 Identities=10% Similarity=0.046 Sum_probs=109.4
Q ss_pred cEEEEEec-cCCcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccccC
Q 002909 575 PIIFSMAR-LDTVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTD 653 (867)
Q Consensus 575 ~iIl~vGR-L~~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d 653 (867)
++.+.+|+ =++..+....++++.+.. ..++++++-=+-+.. ..+|++++.+..+++-..+++..+-.
T Consensus 146 ~~tIlvGNSgd~SN~Hie~L~~l~~~~--~~~v~ii~PlsYp~g-------n~~Yi~~V~~~~~~lF~~~~~~~L~e--- 213 (322)
T PRK02797 146 KMTILVGNSGDRSNRHIEALRALHQQF--GDNVKIIVPMGYPAN-------NQAYIEEVRQAGLALFGAENFQILTE--- 213 (322)
T ss_pred ceEEEEeCCCCCcccHHHHHHHHHHHh--CCCeEEEEECCcCCC-------CHHHHHHHHHHHHHhcCcccEEehhh---
Confidence 45555665 567777877888877664 357888777655421 24788888888888876688988764
Q ss_pred CCChHHHHHHHHccCcEEEEcC-CCCCCCHHHHHHHHcCCCEEecCCCC-ccceeecCceEEEeCCCCHHHHHHHHHHHH
Q 002909 654 RYRNGELYRCIADTKGAFVQPA-LYEAFGLTVIEAMNCGLPTFATNQGG-PAEIIIDGVSGFHIDPNNGDESSNKIADFF 731 (867)
Q Consensus 654 ~v~~~el~~~la~~aDvfV~PS-~~EgfGltvlEAMa~GlPVIat~~gG-~~EiI~dg~~G~lv~p~d~e~lA~aI~~ll 731 (867)
.++.+|...+++. ||+.++-- +-+|.|. +.=.+..|+||+.+.... ..++.+.|.. ++++.++. -..+.+
T Consensus 214 ~l~f~eYl~lL~~-~Dl~~f~~~RQQgiGn-l~lLi~~G~~v~l~r~n~fwqdl~e~gv~-Vlf~~d~L---~~~~v~-- 285 (322)
T PRK02797 214 KLPFDDYLALLRQ-CDLGYFIFARQQGIGT-LCLLIQLGKPVVLSRDNPFWQDLTEQGLP-VLFTGDDL---DEDIVR-- 285 (322)
T ss_pred hCCHHHHHHHHHh-CCEEEEeechhhHHhH-HHHHHHCCCcEEEecCCchHHHHHhCCCe-EEecCCcc---cHHHHH--
Confidence 5668999999997 99988764 6889997 566899999999985544 4555444443 33443322 111111
Q ss_pred HHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Q 002909 732 EKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKVLNMGS 770 (867)
Q Consensus 732 ~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll~ly~ 770 (867)
+..++|...-++.+. |+-+.+.+.+.+++.
T Consensus 286 -------e~~rql~~~dk~~I~--Ff~pn~~~~W~~~l~ 315 (322)
T PRK02797 286 -------EAQRQLASVDKNIIA--FFSPNYLQGWRNALA 315 (322)
T ss_pred -------HHHHHHHhhCcceee--ecCHhHHHHHHHHHH
Confidence 112334444455553 888887777777543
No 137
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=97.09 E-value=0.0093 Score=72.04 Aligned_cols=144 Identities=17% Similarity=0.123 Sum_probs=108.4
Q ss_pred ccccccCCCCcEEEEEeccCCcCChHHHHH----HHHHhH-ccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHc
Q 002909 565 HIGYLADRKKPIIFSMARLDTVKNITGLTE----WYGKNK-RLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKY 639 (867)
Q Consensus 565 ~lGll~~~~k~iIl~vGRL~~~Kgid~Lie----A~~~l~-~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~ 639 (867)
..|+-.+++..+++++=|+..+|.....+. .+..++ +..|.+.+++.|...+ .|......+..+...++..
T Consensus 478 ~~gi~~~p~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP----~y~~aK~iIk~I~~~a~~i 553 (750)
T COG0058 478 RTGIEVDPNALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHP----ADYAAKEIIKLINDVADVI 553 (750)
T ss_pred hcCCccCCCcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCC----cchHHHHHHHHHHHHHHhh
Confidence 345555788999999999999998877553 344444 3335565565565443 4566667777788888877
Q ss_pred CCCCcEEEcccccCCCChHHHHHHHHccCcEEEEcCC--CCCCCHHHHHHHHcCCCEEecCCCCccceee--cCceEEEe
Q 002909 640 QLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPAL--YEAFGLTVIEAMNCGLPTFATNQGGPAEIII--DGVSGFHI 715 (867)
Q Consensus 640 ~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~--~EgfGltvlEAMa~GlPVIat~~gG~~EiI~--dg~~G~lv 715 (867)
+...+|.|+.- .+ -.+.+.+-.++||-.+.|. .|+.|.+=+=||.-|.++|+|--|...|+.+ ++.|||.|
T Consensus 554 n~~lkVvFl~n----Yd-vslA~~iipa~Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~f 628 (750)
T COG0058 554 NNKLKVVFLPN----YD-VSLAELLIPAADVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIF 628 (750)
T ss_pred cccceEEEeCC----CC-hhHHHhhcccccccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEe
Confidence 66678999872 22 2455666567999998775 8999999999999999999999999999996 89999999
Q ss_pred CC
Q 002909 716 DP 717 (867)
Q Consensus 716 ~p 717 (867)
-.
T Consensus 629 G~ 630 (750)
T COG0058 629 GE 630 (750)
T ss_pred CC
Confidence 63
No 138
>PLN02208 glycosyltransferase family protein
Probab=97.04 E-value=0.58 Score=54.62 Aligned_cols=91 Identities=10% Similarity=0.047 Sum_probs=55.1
Q ss_pred CcEEEcccccCCCChHHHHHHHHccCc--EEEEcCCCCCCC-HHHHHHHHcCCCEEecCCC----Cccceeec-CceEEE
Q 002909 643 GQFRWIAAQTDRYRNGELYRCIADTKG--AFVQPALYEAFG-LTVIEAMNCGLPTFATNQG----GPAEIIID-GVSGFH 714 (867)
Q Consensus 643 ~~V~flG~~~d~v~~~el~~~la~~aD--vfV~PS~~EgfG-ltvlEAMa~GlPVIat~~g----G~~EiI~d-g~~G~l 714 (867)
.++.+.+|.+. .++.. . .. +||. .+| ++++||+++|+|+|+.... ..+..+.+ -+.|..
T Consensus 311 ~g~~v~~W~PQ----~~iL~---H-~~v~~Fvt-----HcG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~ 377 (442)
T PLN02208 311 RGVVWGGWVQQ----PLILD---H-PSIGCFVN-----HCGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVE 377 (442)
T ss_pred CCcEeeccCCH----HHHhc---C-CccCeEEc-----cCCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEE
Confidence 45666676443 44444 2 33 3442 234 4799999999999997543 34444333 456777
Q ss_pred eCC-----CCHHHHHHHHHHHHHHhhcCH-HHHHHHHHHHHH
Q 002909 715 IDP-----NNGDESSNKIADFFEKCKTDA-GYWNQMSAAGRQ 750 (867)
Q Consensus 715 v~p-----~d~e~lA~aI~~ll~~~~~dp-~~~~~m~~~ar~ 750 (867)
++. -+.++++++|.+++ .++ +..+++.+++++
T Consensus 378 ~~~~~~~~~~~~~l~~ai~~~m----~~~~e~g~~~r~~~~~ 415 (442)
T PLN02208 378 VSREKTGWFSKESLSNAIKSVM----DKDSDLGKLVRSNHTK 415 (442)
T ss_pred eccccCCcCcHHHHHHHHHHHh----cCCchhHHHHHHHHHH
Confidence 754 26678888888887 554 344455554443
No 139
>PLN02554 UDP-glycosyltransferase family protein
Probab=96.84 E-value=1.4 Score=52.01 Aligned_cols=88 Identities=17% Similarity=0.154 Sum_probs=51.2
Q ss_pred CcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCC----cc-ceeecCceEEEeCC
Q 002909 643 GQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PA-EIIIDGVSGFHIDP 717 (867)
Q Consensus 643 ~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG----~~-EiI~dg~~G~lv~p 717 (867)
+++.+.+|.+ ..++... . ++++||.= -|+ ++++||+.+|+|+|+....+ .+ ..++.-+.|..++.
T Consensus 342 ~~g~v~~W~P----Q~~iL~H-~-~v~~FvtH---~G~-nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~ 411 (481)
T PLN02554 342 DIGKVIGWAP----QVAVLAK-P-AIGGFVTH---CGW-NSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRK 411 (481)
T ss_pred cCceEEeeCC----HHHHhCC-c-ccCccccc---Ccc-chHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeec
Confidence 5666667644 3455531 1 24555532 222 47999999999999975533 33 33444456766631
Q ss_pred -------------CCHHHHHHHHHHHHHHhhcCHHHHHH
Q 002909 718 -------------NNGDESSNKIADFFEKCKTDAGYWNQ 743 (867)
Q Consensus 718 -------------~d~e~lA~aI~~ll~~~~~dp~~~~~ 743 (867)
-+.++++++|.+++. .|++++++
T Consensus 412 ~~~~~~~~~~~~~~~~e~l~~av~~vm~---~~~~~r~~ 447 (481)
T PLN02554 412 YWRGDLLAGEMETVTAEEIERGIRCLME---QDSDVRKR 447 (481)
T ss_pred cccccccccccCeEcHHHHHHHHHHHhc---CCHHHHHH
Confidence 256778888877772 25554443
No 140
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=96.76 E-value=0.0077 Score=73.26 Aligned_cols=143 Identities=15% Similarity=0.032 Sum_probs=102.6
Q ss_pred ccccccCCCCcEEEEEeccCCcCChHH-HHHH---HHHhHccC----CCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHH
Q 002909 565 HIGYLADRKKPIIFSMARLDTVKNITG-LTEW---YGKNKRLR----NMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLI 636 (867)
Q Consensus 565 ~lGll~~~~k~iIl~vGRL~~~Kgid~-LieA---~~~l~~~~----~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li 636 (867)
+.|+..+++...++++-|+..+|.... ++.. +.++++.- ...++++.|...+ .|......++.+..++
T Consensus 520 ~~g~~ldp~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP----~y~~aK~iIklI~~va 595 (798)
T PRK14985 520 RTGIEINPQAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAP----GYYLAKNIIFAINKVA 595 (798)
T ss_pred HhCCccCchhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCC----CcHHHHHHHHHHHHHH
Confidence 346666888889999999999999888 5544 44444320 1256666665433 3555556666666666
Q ss_pred HHcC----CCC--cEEEcccccCCCChHHHHHHHHccCcEEEEcCC--CCCCCHHHHHHHHcCCCEEecCCCCccceeec
Q 002909 637 EKYQ----LQG--QFRWIAAQTDRYRNGELYRCIADTKGAFVQPAL--YEAFGLTVIEAMNCGLPTFATNQGGPAEIIID 708 (867)
Q Consensus 637 ~~~~----L~~--~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~--~EgfGltvlEAMa~GlPVIat~~gG~~EiI~d 708 (867)
+..+ ..+ +|.|+.- .+. .+.+.+-.++|+-.+-|. .|+.|..=+=+|.-|.++++|--|...|+.++
T Consensus 596 ~~in~Dp~v~~~lkVVFlen----Y~V-slAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~ 670 (798)
T PRK14985 596 EVINNDPLVGDKLKVVFLPD----YCV-SAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQ 670 (798)
T ss_pred HHhcCChhhCCceeEEEeCC----CCh-HHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHH
Confidence 5442 334 6888762 222 455555557999998776 89999999999999999999999999999875
Q ss_pred --CceEEEeC
Q 002909 709 --GVSGFHID 716 (867)
Q Consensus 709 --g~~G~lv~ 716 (867)
++|||.|-
T Consensus 671 vG~eN~f~fG 680 (798)
T PRK14985 671 VGEENIFIFG 680 (798)
T ss_pred hCcCcEEEeC
Confidence 78999995
No 141
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=96.72 E-value=0.0092 Score=72.71 Aligned_cols=143 Identities=18% Similarity=0.108 Sum_probs=102.1
Q ss_pred ccccccCCCCcEEEEEeccCCcCChHH-HHH---HHHHhHccC----CCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHH
Q 002909 565 HIGYLADRKKPIIFSMARLDTVKNITG-LTE---WYGKNKRLR----NMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLI 636 (867)
Q Consensus 565 ~lGll~~~~k~iIl~vGRL~~~Kgid~-Lie---A~~~l~~~~----~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li 636 (867)
..|+..+++...++++-|+..+|.... ++. .+.++++.- ....+++.|...+ .|......++.+..++
T Consensus 518 ~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP----~y~~aK~iIklI~~va 593 (794)
T TIGR02093 518 HTGVEVDPNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAP----GYHMAKLIIKLINSVA 593 (794)
T ss_pred hcCCccCccccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCC----CcHHHHHHHHHHHHHH
Confidence 446666888899999999999999888 444 455554321 1345555555433 3445555666666666
Q ss_pred HHcC----CCC--cEEEcccccCCCChHHHHHHHHccCcEEEEcCC--CCCCCHHHHHHHHcCCCEEecCCCCccceeec
Q 002909 637 EKYQ----LQG--QFRWIAAQTDRYRNGELYRCIADTKGAFVQPAL--YEAFGLTVIEAMNCGLPTFATNQGGPAEIIID 708 (867)
Q Consensus 637 ~~~~----L~~--~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~--~EgfGltvlEAMa~GlPVIat~~gG~~EiI~d 708 (867)
+..+ ..+ +|.|+.- .+. .+.+.+-.+||+-.+-|. .|+.|..=+=+|.-|.++++|--|...|+.++
T Consensus 594 ~~iN~Dp~v~~~lkVVFlen----Y~V-slAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e~ 668 (794)
T TIGR02093 594 EVVNNDPAVGDKLKVVFVPN----YNV-SLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREE 668 (794)
T ss_pred HHhccChhhCCceeEEEeCC----CCh-HHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHHH
Confidence 4422 344 6888762 222 455555556999998776 89999999999999999999999999999977
Q ss_pred --CceEEEeC
Q 002909 709 --GVSGFHID 716 (867)
Q Consensus 709 --g~~G~lv~ 716 (867)
++|+|+|-
T Consensus 669 vG~eN~fiFG 678 (794)
T TIGR02093 669 VGAENIFIFG 678 (794)
T ss_pred hCcccEEEcC
Confidence 78999984
No 142
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=96.68 E-value=0.098 Score=57.82 Aligned_cols=137 Identities=15% Similarity=0.147 Sum_probs=76.5
Q ss_pred CCCCcEEEEEeccC-CcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcc
Q 002909 571 DRKKPIIFSMARLD-TVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIA 649 (867)
Q Consensus 571 ~~~k~iIl~vGRL~-~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG 649 (867)
+++..+++++|.=. -..=++..++|+..+....+ .-++|.|...+ ..+.+++...-.-.++|...-
T Consensus 217 pE~~~Ilvs~GGG~dG~eLi~~~l~A~~~l~~l~~-~~~ivtGP~MP------------~~~r~~l~~~A~~~p~i~I~~ 283 (400)
T COG4671 217 PEGFDILVSVGGGADGAELIETALAAAQLLAGLNH-KWLIVTGPFMP------------EAQRQKLLASAPKRPHISIFE 283 (400)
T ss_pred CccceEEEecCCChhhHHHHHHHHHHhhhCCCCCc-ceEEEeCCCCC------------HHHHHHHHHhcccCCCeEEEE
Confidence 34566788887422 11112233333333333322 23666666655 233444444444457888887
Q ss_pred cccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCCccc--eeec------CceEEEe-CCCCH
Q 002909 650 AQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAE--IIID------GVSGFHI-DPNNG 720 (867)
Q Consensus 650 ~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG~~E--iI~d------g~~G~lv-~p~d~ 720 (867)
+.. ++..+++. |+..|.=+-| +|+.|-+++|||.+.-..+.+.| .+.. |-..++. +.-++
T Consensus 284 f~~------~~~~ll~g-A~~vVSm~GY----NTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL~pe~lt~ 352 (400)
T COG4671 284 FRN------DFESLLAG-ARLVVSMGGY----NTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVLLPENLTP 352 (400)
T ss_pred hhh------hHHHHHHh-hheeeecccc----hhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceeeCcccCCh
Confidence 644 46777776 8888865322 58999999999998876655443 1110 2222222 22346
Q ss_pred HHHHHHHHHHH
Q 002909 721 DESSNKIADFF 731 (867)
Q Consensus 721 e~lA~aI~~ll 731 (867)
+.+|++|..++
T Consensus 353 ~~La~al~~~l 363 (400)
T COG4671 353 QNLADALKAAL 363 (400)
T ss_pred HHHHHHHHhcc
Confidence 77777777666
No 143
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=96.66 E-value=0.15 Score=56.63 Aligned_cols=122 Identities=10% Similarity=0.019 Sum_probs=87.7
Q ss_pred CcEEEEEec-cCCcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEccccc
Q 002909 574 KPIIFSMAR-LDTVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQT 652 (867)
Q Consensus 574 k~iIl~vGR-L~~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~ 652 (867)
+++-+.+|+ -++..+.-..++++.+.. ..+++++|-=+-+. ...+|++++.+..+++--.+++..+-.
T Consensus 184 ~~ltILvGNSgd~sNnHieaL~~L~~~~--~~~~kIivPLsYg~-------~n~~Yi~~V~~~~~~lF~~~~~~iL~e-- 252 (360)
T PF07429_consen 184 GKLTILVGNSGDPSNNHIEALEALKQQF--GDDVKIIVPLSYGA-------NNQAYIQQVIQAGKELFGAENFQILTE-- 252 (360)
T ss_pred CceEEEEcCCCCCCccHHHHHHHHHHhc--CCCeEEEEECCCCC-------chHHHHHHHHHHHHHhcCccceeEhhh--
Confidence 344455554 567777877777776533 35677766544332 023788888888888766678887653
Q ss_pred CCCChHHHHHHHHccCcEEEEcC-CCCCCCHHHHHHHHcCCCEEecCCCCccceeecC
Q 002909 653 DRYRNGELYRCIADTKGAFVQPA-LYEAFGLTVIEAMNCGLPTFATNQGGPAEIIIDG 709 (867)
Q Consensus 653 d~v~~~el~~~la~~aDvfV~PS-~~EgfGltvlEAMa~GlPVIat~~gG~~EiI~dg 709 (867)
.++.+|..++++. ||+.++.. +-.|.|. +.=.+.+|+||+.+.....-..+.+.
T Consensus 253 -~mpf~eYl~lL~~-cDl~if~~~RQQgiGn-I~lLl~~G~~v~L~~~np~~~~l~~~ 307 (360)
T PF07429_consen 253 -FMPFDEYLALLSR-CDLGIFNHNRQQGIGN-ICLLLQLGKKVFLSRDNPFWQDLKEQ 307 (360)
T ss_pred -hCCHHHHHHHHHh-CCEEEEeechhhhHhH-HHHHHHcCCeEEEecCChHHHHHHhC
Confidence 5668999999997 99999986 5789997 67799999999999876665555443
No 144
>PLN02562 UDP-glycosyltransferase
Probab=96.60 E-value=2.1 Score=50.07 Aligned_cols=88 Identities=15% Similarity=0.151 Sum_probs=56.8
Q ss_pred CCcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCC----CCccceeec-CceEEEeC
Q 002909 642 QGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQ----GGPAEIIID-GVSGFHID 716 (867)
Q Consensus 642 ~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~----gG~~EiI~d-g~~G~lv~ 716 (867)
.+++.+.+|.+ ..++... . +.++||.= -| -.+++||+.+|+|+|+... ...+..+.+ -+.|+-+.
T Consensus 327 ~~~~~v~~w~P----Q~~iL~h-~-~v~~fvtH---~G-~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~ 396 (448)
T PLN02562 327 SKQGKVVSWAP----QLEVLKH-Q-AVGCYLTH---CG-WNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRIS 396 (448)
T ss_pred ccCEEEEecCC----HHHHhCC-C-ccceEEec---Cc-chhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeC
Confidence 46777778644 4555542 1 12345532 12 2479999999999998754 334455544 35677776
Q ss_pred CCCHHHHHHHHHHHHHHhhcCHHHHHH
Q 002909 717 PNNGDESSNKIADFFEKCKTDAGYWNQ 743 (867)
Q Consensus 717 p~d~e~lA~aI~~ll~~~~~dp~~~~~ 743 (867)
.-+.++++++|.+++ .|++++++
T Consensus 397 ~~~~~~l~~~v~~~l----~~~~~r~~ 419 (448)
T PLN02562 397 GFGQKEVEEGLRKVM----EDSGMGER 419 (448)
T ss_pred CCCHHHHHHHHHHHh----CCHHHHHH
Confidence 567889999998887 77765544
No 145
>PLN02210 UDP-glucosyl transferase
Probab=96.58 E-value=2.4 Score=49.85 Aligned_cols=77 Identities=18% Similarity=0.190 Sum_probs=48.4
Q ss_pred CcEEEcccccCCCChHHHHHHHHccCc--EEEEcCCCCCCCHHHHHHHHcCCCEEecCCCC----ccceeec-CceEEEe
Q 002909 643 GQFRWIAAQTDRYRNGELYRCIADTKG--AFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEIIID-GVSGFHI 715 (867)
Q Consensus 643 ~~V~flG~~~d~v~~~el~~~la~~aD--vfV~PS~~EgfGltvlEAMa~GlPVIat~~gG----~~EiI~d-g~~G~lv 715 (867)
++....+|.+ ..++.. . +. +||.= -|+ ++++||+++|+|+|+-...+ .+..+.+ -+.|..+
T Consensus 324 ~~g~v~~w~P----Q~~iL~---h-~~vg~FitH---~G~-nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l 391 (456)
T PLN02210 324 GQGVVLEWSP----QEKILS---H-MAISCFVTH---CGW-NSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRM 391 (456)
T ss_pred CCeEEEecCC----HHHHhc---C-cCcCeEEee---CCc-ccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEE
Confidence 3344556543 445554 2 43 56632 222 37999999999999975533 3445554 4678777
Q ss_pred CC------CCHHHHHHHHHHHH
Q 002909 716 DP------NNGDESSNKIADFF 731 (867)
Q Consensus 716 ~p------~d~e~lA~aI~~ll 731 (867)
.. -+.+++++++.+++
T Consensus 392 ~~~~~~~~~~~~~l~~av~~~m 413 (456)
T PLN02210 392 RNDAVDGELKVEEVERCIEAVT 413 (456)
T ss_pred eccccCCcCCHHHHHHHHHHHh
Confidence 42 36788889888887
No 146
>PRK14986 glycogen phosphorylase; Provisional
Probab=96.50 E-value=0.016 Score=70.96 Aligned_cols=151 Identities=15% Similarity=0.088 Sum_probs=110.0
Q ss_pred ccccccCCCCcEEEEEeccCCcCChHH-HHHH---HHHhHccC----CCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHH
Q 002909 565 HIGYLADRKKPIIFSMARLDTVKNITG-LTEW---YGKNKRLR----NMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLI 636 (867)
Q Consensus 565 ~lGll~~~~k~iIl~vGRL~~~Kgid~-LieA---~~~l~~~~----~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li 636 (867)
..|...+++...++++-|+..+|.... ++.. +.++++.- ...++++.|...+ .|......++.+..++
T Consensus 534 ~~g~~ldp~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP----~y~~aK~iIk~I~~va 609 (815)
T PRK14986 534 QLNVVVNPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAAS----AYYMAKHIIHLINDVA 609 (815)
T ss_pred HhCCccCcccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCC----CcHHHHHHHHHHHHHH
Confidence 346666889999999999999999988 5554 55554421 2356666665443 4556667777777777
Q ss_pred HH----cCCCC--cEEEcccccCCCChHHHHHHHHccCcEEEEcCC--CCCCCHHHHHHHHcCCCEEecCCCCccceeec
Q 002909 637 EK----YQLQG--QFRWIAAQTDRYRNGELYRCIADTKGAFVQPAL--YEAFGLTVIEAMNCGLPTFATNQGGPAEIIID 708 (867)
Q Consensus 637 ~~----~~L~~--~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~--~EgfGltvlEAMa~GlPVIat~~gG~~EiI~d 708 (867)
+. -.+.+ +|.|+.- .+ -.+.+.+-.++|+-.+-|. .|+.|..=+=||.-|.+.++|--|...|+.++
T Consensus 610 ~~in~Dp~v~~~lkVVFlen----Y~-vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~ 684 (815)
T PRK14986 610 KVINNDPQIGDKLKVVFIPN----YS-VSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEH 684 (815)
T ss_pred HHhccChhhcCceeEEEeCC----CC-HHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHh
Confidence 72 22344 7888762 22 2556666667999999776 89999999999999999999999999999976
Q ss_pred --CceEEEeCCCCHHHHHH
Q 002909 709 --GVSGFHIDPNNGDESSN 725 (867)
Q Consensus 709 --g~~G~lv~p~d~e~lA~ 725 (867)
++|||.|-. +.++..+
T Consensus 685 vG~eN~~~fG~-~~~ev~~ 702 (815)
T PRK14986 685 VGEENIFIFGN-TAEEVEA 702 (815)
T ss_pred cCCCcEEEeCC-CHHHHHH
Confidence 889999953 5555544
No 147
>PLN02173 UDP-glucosyl transferase family protein
Probab=96.45 E-value=2.8 Score=49.15 Aligned_cols=78 Identities=17% Similarity=0.195 Sum_probs=50.5
Q ss_pred CCcEEEcccccCCCChHHHHHHHHccCc--EEEEcCCCCCCCHHHHHHHHcCCCEEecCC----CCccceeecC-ceEEE
Q 002909 642 QGQFRWIAAQTDRYRNGELYRCIADTKG--AFVQPALYEAFGLTVIEAMNCGLPTFATNQ----GGPAEIIIDG-VSGFH 714 (867)
Q Consensus 642 ~~~V~flG~~~d~v~~~el~~~la~~aD--vfV~PS~~EgfGltvlEAMa~GlPVIat~~----gG~~EiI~dg-~~G~l 714 (867)
.+++.+.+|.+ ..++.. . .. +||.= +-.++++||+++|+|+|+... .-.+..+++. +.|.-
T Consensus 316 ~~~~~i~~W~P----Q~~iL~---H-~~v~~FvtH----cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~ 383 (449)
T PLN02173 316 KDKSLVLKWSP----QLQVLS---N-KAIGCFMTH----CGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVR 383 (449)
T ss_pred CCceEEeCCCC----HHHHhC---C-CccceEEec----CccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEE
Confidence 36788888755 345554 2 43 55532 223589999999999999754 3344455543 46766
Q ss_pred eCCC------CHHHHHHHHHHHH
Q 002909 715 IDPN------NGDESSNKIADFF 731 (867)
Q Consensus 715 v~p~------d~e~lA~aI~~ll 731 (867)
+... +.+++++++.+++
T Consensus 384 v~~~~~~~~~~~e~v~~av~~vm 406 (449)
T PLN02173 384 VKAEKESGIAKREEIEFSIKEVM 406 (449)
T ss_pred EeecccCCcccHHHHHHHHHHHh
Confidence 6421 5688999998887
No 148
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=96.42 E-value=0.12 Score=63.39 Aligned_cols=152 Identities=14% Similarity=0.108 Sum_probs=109.5
Q ss_pred CCCcEEEEEeccCCcCChHHHHHHHHHhHccCC----CeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHc----CC--
Q 002909 572 RKKPIIFSMARLDTVKNITGLTEWYGKNKRLRN----MVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKY----QL-- 641 (867)
Q Consensus 572 ~~k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~----~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~----~L-- 641 (867)
.++.+|+.+-|++..||+..=+.++.++.+.+| .+.++.+..+.. ....+.......+...+.+. +-
T Consensus 274 ~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~---~~~~~v~~~k~~v~~~v~rIn~~f~~~~ 350 (732)
T KOG1050|consen 274 KGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKR---TDGKEVEELKFCVSVHVRRINEKFGSAS 350 (732)
T ss_pred cCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCCc---ccchHHHHHHHHhHhhhhhhhhccCCcc
Confidence 477899999999999999887888877765544 566777766544 12222222223333333322 21
Q ss_pred CCcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcC----CCEEecCCCCccceeecCceEEEeCC
Q 002909 642 QGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCG----LPTFATNQGGPAEIIIDGVSGFHIDP 717 (867)
Q Consensus 642 ~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~G----lPVIat~~gG~~EiI~dg~~G~lv~p 717 (867)
...|+++- ..++..++.++++- +|+....++-+|..++.+|+.+|. .+.|.+..-|..+..++ ...+++|
T Consensus 351 ~~pV~~~~---~~~~~~~l~a~~~V-aev~~v~s~rdGmnl~~~e~i~~~~~~~~~lVlsef~G~~~tl~d--~aivvnp 424 (732)
T KOG1050|consen 351 YQPVHSLL---KDLPFLELLALYKV-AEVCPVTSWRDGMNLVFLEYILCQENKKSVLVLSEFIGDDTTLED--AAIVVNP 424 (732)
T ss_pred cceEEEee---ccCCHHHHhhhHHh-hhheeecccccccchhhhHHHHhhcccCCceEEeeeccccccccc--cCEEECC
Confidence 13344333 25667899998887 999999999999999999999984 78888988888888754 4678899
Q ss_pred CCHHHHHHHHHHHHH
Q 002909 718 NNGDESSNKIADFFE 732 (867)
Q Consensus 718 ~d~e~lA~aI~~ll~ 732 (867)
.|.++++..|..++.
T Consensus 425 w~~~~~~~~i~~al~ 439 (732)
T KOG1050|consen 425 WDGDEFAILISKALT 439 (732)
T ss_pred cchHHHHHHHHHHhh
Confidence 999999999988884
No 149
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=96.38 E-value=0.54 Score=51.38 Aligned_cols=112 Identities=13% Similarity=0.109 Sum_probs=65.1
Q ss_pred CCcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccccCCCChHHHHHH
Q 002909 584 DTVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTDRYRNGELYRC 663 (867)
Q Consensus 584 ~~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d~v~~~el~~~ 663 (867)
...++++.+.+++..+.+.. .|++-.. +..++..+.+ .++...-. .. +-..+
T Consensus 198 ~g~~~~~~~~~li~~l~k~g----iV~ipr~---------------~~~~eife~~---~n~i~pk~-----~v-D~l~L 249 (346)
T COG1817 198 NGDRGISVLPDLIKELKKYG----IVLIPRE---------------KEQAEIFEGY---RNIIIPKK-----AV-DTLSL 249 (346)
T ss_pred ccccchhhHHHHHHHHHhCc----EEEecCc---------------hhHHHHHhhh---ccccCCcc-----cc-cHHHH
Confidence 34677778888888887643 4444332 2234444444 22222111 11 11223
Q ss_pred HHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCC---CccceeecCceEEEeCCCCHHHHHHHHHHHH
Q 002909 664 IADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQG---GPAEIIIDGVSGFHIDPNNGDESSNKIADFF 731 (867)
Q Consensus 664 la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~g---G~~EiI~dg~~G~lv~p~d~e~lA~aI~~ll 731 (867)
+.- |++++- +-|.-.-||...|+|.|++.-| +..+.. -+.|.++..+|+.+..+...+.+
T Consensus 250 lyy-a~lvig-----~ggTMarEaAlLGtpaIs~~pGkll~vdk~l--ie~G~~~~s~~~~~~~~~a~~~l 312 (346)
T COG1817 250 LYY-ATLVIG-----AGGTMAREAALLGTPAISCYPGKLLAVDKYL--IEKGLLYHSTDEIAIVEYAVRNL 312 (346)
T ss_pred Hhh-hheeec-----CCchHHHHHHHhCCceEEecCCccccccHHH--HhcCceeecCCHHHHHHHHHHHh
Confidence 332 566663 3466789999999999998744 222332 24688888888887777776665
No 150
>PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins. These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process
Probab=96.35 E-value=0.017 Score=51.20 Aligned_cols=73 Identities=19% Similarity=0.151 Sum_probs=49.9
Q ss_pred CCCCeEEEEccCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEECCCChHH--HHHHHHHhcCCcEEE
Q 002909 360 DTKHSHILRIPFKTEQAILPQWVSRFDIYPYLGRFAQDATAKILDLMEGKPDLIIGNYSDGNL--VASLMASKLGITQAT 437 (867)
Q Consensus 360 ~~~~v~I~rvp~~~~~~~l~~~isr~~i~p~l~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~l--~a~lla~~~gip~V~ 437 (867)
-++|.++..+|+... -+....|.+-....-+...+.+ ++.||||+|...+++ -+.+.|+.+|++.|+
T Consensus 12 ltngLKVYYlP~~~~--------~~~~t~Pt~~~~~pl~R~Ilir---E~I~IVHgH~a~S~l~hE~i~hA~~mGlktVf 80 (90)
T PF08288_consen 12 LTNGLKVYYLPLKVF--------YNQCTLPTLFGSFPLLRNILIR---ERIDIVHGHQAFSTLCHEAILHARTMGLKTVF 80 (90)
T ss_pred cCCCeEEEeecchhh--------hcCcchHHHHHhhHHHHHHHHH---cCeeEEEeehhhhHHHHHHHHHHHhCCCcEEe
Confidence 355899999998753 1233444444333333333333 589999999876644 578889999999999
Q ss_pred EEcCCc
Q 002909 438 IAHALE 443 (867)
Q Consensus 438 t~H~l~ 443 (867)
|-|++.
T Consensus 81 TDHSLf 86 (90)
T PF08288_consen 81 TDHSLF 86 (90)
T ss_pred eccccc
Confidence 999865
No 151
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=96.21 E-value=0.28 Score=54.48 Aligned_cols=109 Identities=14% Similarity=0.071 Sum_probs=65.5
Q ss_pred CCCcEEEEEeccCCcCC--hH---HHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcE-
Q 002909 572 RKKPIIFSMARLDTVKN--IT---GLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQF- 645 (867)
Q Consensus 572 ~~k~iIl~vGRL~~~Kg--id---~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V- 645 (867)
+...+.+.+|.=...-. -+ .+++.+..+.+... ..+.|..+...+ .+..+.|.+. ++-.+.+
T Consensus 145 ~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~vttSRRTp--------~~~~~~L~~~---~~~~~~~~ 212 (311)
T PF06258_consen 145 PRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYG-GSLLVTTSRRTP--------PEAEAALREL---LKDNPGVY 212 (311)
T ss_pred CCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCC-CeEEEEcCCCCc--------HHHHHHHHHh---hcCCCceE
Confidence 34456667775433222 22 56666666665544 789998887552 1222333333 3334566
Q ss_pred EEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCC
Q 002909 646 RWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG 701 (867)
Q Consensus 646 ~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG 701 (867)
.|-+. ..+-+..+|+. ||.++.+.. .-.-+.||.++|+||..-...+
T Consensus 213 ~~~~~-----~~nPy~~~La~-ad~i~VT~D---SvSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 213 IWDGT-----GENPYLGFLAA-ADAIVVTED---SVSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred EecCC-----CCCcHHHHHHh-CCEEEEcCc---cHHHHHHHHHcCCCEEEecCCC
Confidence 55321 12346677776 999998843 2335899999999999987765
No 152
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=96.05 E-value=4.4 Score=47.53 Aligned_cols=92 Identities=11% Similarity=0.149 Sum_probs=55.4
Q ss_pred CCcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCC----CCccceeecC-ceEEEeC
Q 002909 642 QGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQ----GGPAEIIIDG-VSGFHID 716 (867)
Q Consensus 642 ~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~----gG~~EiI~dg-~~G~lv~ 716 (867)
.++....+|.+ ..++... . +.++||.= -|+ ++++||+++|+|+|+... ...+..+.+. +.|+.+.
T Consensus 323 ~~~g~v~~w~P----Q~~iL~h-~-~v~~fvtH---~G~-nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~ 392 (451)
T PLN02410 323 SGRGYIVKWAP----QKEVLSH-P-AVGGFWSH---CGW-NSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVE 392 (451)
T ss_pred cCCeEEEccCC----HHHHhCC-C-ccCeeeec---Cch-hHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeC
Confidence 35666667644 4555542 1 13446643 222 479999999999999754 3344444443 5777663
Q ss_pred -CCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHH
Q 002909 717 -PNNGDESSNKIADFFEKCKTDAGYWNQMSAAG 748 (867)
Q Consensus 717 -p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~a 748 (867)
.-+.++++++|.+++ .+++ .+++.+++
T Consensus 393 ~~~~~~~v~~av~~lm----~~~~-~~~~r~~a 420 (451)
T PLN02410 393 GDLDRGAVERAVKRLM----VEEE-GEEMRKRA 420 (451)
T ss_pred CcccHHHHHHHHHHHH----cCCc-HHHHHHHH
Confidence 336788999998887 5543 33344443
No 153
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=96.02 E-value=0.24 Score=60.04 Aligned_cols=143 Identities=16% Similarity=0.107 Sum_probs=92.7
Q ss_pred ccccccCCCCcEEEEEeccCCcCChHHH----HHHHHHhHcc----CCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHH
Q 002909 565 HIGYLADRKKPIIFSMARLDTVKNITGL----TEWYGKNKRL----RNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLI 636 (867)
Q Consensus 565 ~lGll~~~~k~iIl~vGRL~~~Kgid~L----ieA~~~l~~~----~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li 636 (867)
..|+..+++...++++-|+..+|..... ++-+.++++. ...+++++.|...+ .|...+..++.+.+++
T Consensus 435 ~~~~~ldp~slfdv~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP----~d~~gK~iIk~I~~va 510 (713)
T PF00343_consen 435 RTGVELDPDSLFDVQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHP----GDYMGKEIIKLINNVA 510 (713)
T ss_dssp HHSS---TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----T----T-HHHHHHHHHHHHHH
T ss_pred HhCCCCCcchhhhhhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCC----CcHHHHHHHHHHHHHH
Confidence 3455447888889999999999998883 4555566542 12366766666543 4555666666666666
Q ss_pred HHc----CCCC--cEEEcccccCCCChHHHHHHHHccCcEEEEcCC--CCCCCHHHHHHHHcCCCEEecCCCCccceeec
Q 002909 637 EKY----QLQG--QFRWIAAQTDRYRNGELYRCIADTKGAFVQPAL--YEAFGLTVIEAMNCGLPTFATNQGGPAEIIID 708 (867)
Q Consensus 637 ~~~----~L~~--~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~--~EgfGltvlEAMa~GlPVIat~~gG~~EiI~d 708 (867)
+.. .+.+ +|.|+.- .+ =.+.+.+-.++||-.+.|+ .|+.|.+-+=||.-|.+.++|--|...|+.+.
T Consensus 511 ~~in~Dp~v~~~lkVvFlen----Yd-vslA~~lipg~DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~ 585 (713)
T PF00343_consen 511 EVINNDPEVGDRLKVVFLEN----YD-VSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEA 585 (713)
T ss_dssp HHHCT-TTTCCGEEEEEETT-----S-HHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHH
T ss_pred HHHhcChhhccceeEEeecC----Cc-HHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHh
Confidence 532 2444 6888872 22 3567777777999999876 89999999999999999999999999999753
Q ss_pred --CceEEEeC
Q 002909 709 --GVSGFHID 716 (867)
Q Consensus 709 --g~~G~lv~ 716 (867)
.+|+|+|-
T Consensus 586 vG~eN~fiFG 595 (713)
T PF00343_consen 586 VGEENIFIFG 595 (713)
T ss_dssp H-GGGSEEES
T ss_pred cCCCcEEEcC
Confidence 46788884
No 154
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=95.98 E-value=0.1 Score=58.92 Aligned_cols=91 Identities=16% Similarity=0.107 Sum_probs=56.6
Q ss_pred cEEEEEeccC-C-cCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEccccc
Q 002909 575 PIIFSMARLD-T-VKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQT 652 (867)
Q Consensus 575 ~iIl~vGRL~-~-~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~ 652 (867)
.+.++.|.-. + .+.+..+++++.++.+.. ..+++.|... .+.+++...+. ..+.+++
T Consensus 169 ~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~--~~~~i~~a~~-------------~~~i~~~~~~~---~~~~~~~--- 227 (347)
T PRK14089 169 TIAFMPGSRKSEIKRLMPIFKELAKKLEGKE--KILVVPSFFK-------------GKDLKEIYGDI---SEFEISY--- 227 (347)
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHHHhhcC--cEEEEeCCCc-------------HHHHHHHHhcC---CCcEEec---
Confidence 3444555422 2 356677889998887643 6677766542 13334433322 2444543
Q ss_pred CCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecC
Q 002909 653 DRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATN 698 (867)
Q Consensus 653 d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~ 698 (867)
+.+.+++. ||+.+..| |.+.+|++.+|+|.|..-
T Consensus 228 ------~~~~~m~~-aDlal~~S-----GT~TLE~al~g~P~Vv~Y 261 (347)
T PRK14089 228 ------DTHKALLE-AEFAFICS-----GTATLEAALIGTPFVLAY 261 (347)
T ss_pred ------cHHHHHHh-hhHHHhcC-----cHHHHHHHHhCCCEEEEE
Confidence 23566665 99888765 888889999999999854
No 155
>PLN03007 UDP-glucosyltransferase family protein
Probab=95.83 E-value=5.7 Score=47.02 Aligned_cols=78 Identities=10% Similarity=0.151 Sum_probs=46.2
Q ss_pred CCcEEEcccccCCCChHHHHHHHHccCcE--EEEcCCCCCCCHHHHHHHHcCCCEEecCCCC----ccceeec-CceEEE
Q 002909 642 QGQFRWIAAQTDRYRNGELYRCIADTKGA--FVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEIIID-GVSGFH 714 (867)
Q Consensus 642 ~~~V~flG~~~d~v~~~el~~~la~~aDv--fV~PS~~EgfGltvlEAMa~GlPVIat~~gG----~~EiI~d-g~~G~l 714 (867)
+.++...+|.+ ..+++. . +++ ||.= -| -++++||+++|+|+|+....+ .+..+.+ -..|+-
T Consensus 344 ~~g~~v~~w~P----Q~~iL~---h-~~v~~fvtH---~G-~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~ 411 (482)
T PLN03007 344 GKGLIIRGWAP----QVLILD---H-QATGGFVTH---CG-WNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVS 411 (482)
T ss_pred cCCEEEecCCC----HHHHhc---c-Cccceeeec---Cc-chHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeE
Confidence 45778778754 345554 2 444 5532 12 248999999999999975533 3322221 123433
Q ss_pred eC----------CCCHHHHHHHHHHHH
Q 002909 715 ID----------PNNGDESSNKIADFF 731 (867)
Q Consensus 715 v~----------p~d~e~lA~aI~~ll 731 (867)
+. .-+.++++++|.+++
T Consensus 412 ~~~~~~~~~~~~~~~~~~l~~av~~~m 438 (482)
T PLN03007 412 VGAKKLVKVKGDFISREKVEKAVREVI 438 (482)
T ss_pred eccccccccccCcccHHHHHHHHHHHh
Confidence 31 136778888888887
No 156
>PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E.coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B.
Probab=95.68 E-value=0.95 Score=48.65 Aligned_cols=139 Identities=17% Similarity=0.094 Sum_probs=77.5
Q ss_pred EEEeccCCcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHH----------HHHHcCC--CCcE
Q 002909 578 FSMARLDTVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHT----------LIEKYQL--QGQF 645 (867)
Q Consensus 578 l~vGRL~~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~----------li~~~~L--~~~V 645 (867)
.|+||...+||...+++.-++..+. ++..-++-|-...+ +.+.-+.. .+.+..+ .+.+
T Consensus 187 ~yigR~Tt~kG~~~mfD~h~~~lK~-~~~~t~~~GierS~---------A~~~i~d~~~~~~y~~~~~~~~~~~~pN~~~ 256 (355)
T PF11440_consen 187 RYIGRQTTWKGPRRMFDLHEKILKP-AGFKTIMEGIERSP---------AKISIKDHGIPYEYYPKLDCDEPKPAPNSPV 256 (355)
T ss_dssp EEE--SSGGG-HHHHHHHHHHTTTT-TT-EEEEE---SST---------HHHHHHHTT--EEEE-CTGGGG---SSS--E
T ss_pred eeeeeeeeecCcHHHhhhHHHhcCC-cchhHHhhhhhcCC---------ceeeeecCCcccccCccccccCcccCCCCcc
Confidence 7999999999999999988886553 66777777754321 11111110 0111111 1235
Q ss_pred EEcccccCCCChHHHHHHHHccCcEEEEcCC------CCCCCHHHHHHHHcC-CCEEecCCCCccc-------eeecCce
Q 002909 646 RWIAAQTDRYRNGELYRCIADTKGAFVQPAL------YEAFGLTVIEAMNCG-LPTFATNQGGPAE-------IIIDGVS 711 (867)
Q Consensus 646 ~flG~~~d~v~~~el~~~la~~aDvfV~PS~------~EgfGltvlEAMa~G-lPVIat~~gG~~E-------iI~dg~~ 711 (867)
-.+| ..-++|....++. +...++-+. -+..-.+-+|..||| +||+-+..|...- .+.+...
T Consensus 257 ~v~~----~Yi~~E~~~~Mak-s~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~D~~~~~~~~~~ 331 (355)
T PF11440_consen 257 PVYG----PYIRSEGLERMAK-SLFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTLDGTRYIDHPYS 331 (355)
T ss_dssp EEES----S--HHHHHHHHHT-EEEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TTTSSBGGSS--S
T ss_pred eecc----hhhhHHHHHHHhh-ccceeecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccceeeecCceeeccCcc
Confidence 5555 4557889998987 555554432 345677999999999 5777766655433 2333456
Q ss_pred EEEeCCCCHHHHHHHHHHHH
Q 002909 712 GFHIDPNNGDESSNKIADFF 731 (867)
Q Consensus 712 G~lv~p~d~e~lA~aI~~ll 731 (867)
.+.+|..|.++..++|.++-
T Consensus 332 ~I~~De~dle~T~ekl~E~a 351 (355)
T PF11440_consen 332 AIYFDENDLESTVEKLIEVA 351 (355)
T ss_dssp -EEE-TTSHHHHHHHHHHHH
T ss_pred eeEeccchHHHHHHHHHHHh
Confidence 77899999999999998775
No 157
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=95.43 E-value=7.7 Score=45.84 Aligned_cols=79 Identities=15% Similarity=0.154 Sum_probs=49.0
Q ss_pred CcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCC----Cccceeec-CceEEEeCC
Q 002909 643 GQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQG----GPAEIIID-GVSGFHIDP 717 (867)
Q Consensus 643 ~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~g----G~~EiI~d-g~~G~lv~p 717 (867)
.++++.+|.+ ..++... .+.++||.= -| -.+++||+++|+|+|+-... -.+..+.+ -+.|..+..
T Consensus 343 ~g~~v~~w~P----Q~~vL~h--~~v~~fvtH---~G-~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~ 412 (477)
T PLN02863 343 RGLVIRGWAP----QVAILSH--RAVGAFLTH---CG-WNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCE 412 (477)
T ss_pred CCEEecCCCC----HHHHhcC--CCcCeEEec---CC-chHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEecc
Confidence 4677778654 3455441 125667643 22 24799999999999997543 34444433 367776632
Q ss_pred -----CCHHHHHHHHHHHH
Q 002909 718 -----NNGDESSNKIADFF 731 (867)
Q Consensus 718 -----~d~e~lA~aI~~ll 731 (867)
-+.+++++++.+++
T Consensus 413 ~~~~~~~~~~v~~~v~~~m 431 (477)
T PLN02863 413 GADTVPDSDELARVFMESV 431 (477)
T ss_pred CCCCCcCHHHHHHHHHHHh
Confidence 25678888887766
No 158
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=95.36 E-value=0.00062 Score=68.14 Aligned_cols=91 Identities=18% Similarity=0.237 Sum_probs=56.5
Q ss_pred CcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCC--------ccceeecCceEEE
Q 002909 643 GQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG--------PAEIIIDGVSGFH 714 (867)
Q Consensus 643 ~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG--------~~EiI~dg~~G~l 714 (867)
.+|.+.++.++ +..+++. ||++|.- +-+.|+.|++++|+|.|.-...+ ....+.....|..
T Consensus 55 ~~v~~~~~~~~------m~~~m~~-aDlvIs~----aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~ 123 (167)
T PF04101_consen 55 PNVKVFGFVDN------MAELMAA-ADLVISH----AGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIM 123 (167)
T ss_dssp CCCEEECSSSS------HHHHHHH-HSEEEEC----S-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCC
T ss_pred CcEEEEechhh------HHHHHHH-cCEEEeC----CCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCccc
Confidence 68999997554 5666665 9998874 23579999999999998866555 2222333334444
Q ss_pred eCCC--CHHHHHHHHHHHHHHhhcCHHHHHHHHHHH
Q 002909 715 IDPN--NGDESSNKIADFFEKCKTDAGYWNQMSAAG 748 (867)
Q Consensus 715 v~p~--d~e~lA~aI~~ll~~~~~dp~~~~~m~~~a 748 (867)
+... +++.+.++|.+++ .++....++++++
T Consensus 124 ~~~~~~~~~~L~~~i~~l~----~~~~~~~~~~~~~ 155 (167)
T PF04101_consen 124 LDESELNPEELAEAIEELL----SDPEKLKEMAKAA 155 (167)
T ss_dssp SECCC-SCCCHHHHHHCHC----CCHH-SHHHCCCH
T ss_pred cCcccCCHHHHHHHHHHHH----cCcHHHHHHHHHH
Confidence 4322 3577888887766 8887766665553
No 159
>PLN00414 glycosyltransferase family protein
Probab=95.15 E-value=8.9 Score=44.93 Aligned_cols=92 Identities=8% Similarity=0.053 Sum_probs=55.4
Q ss_pred EEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCC----ccceee-cCceEEEeCC--
Q 002909 645 FRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEIII-DGVSGFHIDP-- 717 (867)
Q Consensus 645 V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG----~~EiI~-dg~~G~lv~p-- 717 (867)
..+.||.+ ..++... . +.+.||.= +--++++||+++|+|+|+....+ .+..+. .-+.|..+..
T Consensus 314 ~vv~~w~P----Q~~vL~h-~-~v~~fvtH----~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~ 383 (446)
T PLN00414 314 IVWEGWVE----QPLILSH-P-SVGCFVNH----CGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQRED 383 (446)
T ss_pred eEEeccCC----HHHHhcC-C-ccceEEec----CchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEecccc
Confidence 44456533 4555542 1 13556643 22358999999999999975433 444443 3467777742
Q ss_pred ---CCHHHHHHHHHHHHHHhhcCH-HHHHHHHHHHHH
Q 002909 718 ---NNGDESSNKIADFFEKCKTDA-GYWNQMSAAGRQ 750 (867)
Q Consensus 718 ---~d~e~lA~aI~~ll~~~~~dp-~~~~~m~~~ar~ 750 (867)
-+.+++++++.+++ .++ +..+++.+++++
T Consensus 384 ~~~~~~~~i~~~v~~~m----~~~~e~g~~~r~~a~~ 416 (446)
T PLN00414 384 SGWFSKESLRDTVKSVM----DKDSEIGNLVKRNHKK 416 (446)
T ss_pred CCccCHHHHHHHHHHHh----cCChhhHHHHHHHHHH
Confidence 36788888888887 543 344555555543
No 160
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=95.04 E-value=3.3 Score=44.38 Aligned_cols=111 Identities=10% Similarity=0.074 Sum_probs=66.2
Q ss_pred CCCCcEEEEEeccCCcCCh--H---HHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHH-cCCCCc
Q 002909 571 DRKKPIIFSMARLDTVKNI--T---GLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEK-YQLQGQ 644 (867)
Q Consensus 571 ~~~k~iIl~vGRL~~~Kgi--d---~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~-~~L~~~ 644 (867)
.+..++-+.+|.-.+.-.+ + .+..++-+..+. ....+++--+...| +.++.+++. +.-..-
T Consensus 159 ~~rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~-~g~~~lisfSRRTp------------~~~~s~l~~~l~s~~~ 225 (329)
T COG3660 159 LPRQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILEN-QGGSFLISFSRRTP------------DTVKSILKNNLNSSPG 225 (329)
T ss_pred CCCceEEEEecCCCCCCccCHHHHHHHHHHHHHHHHh-CCceEEEEeecCCc------------HHHHHHHHhccccCce
Confidence 4556677888875554333 2 233333332221 34677777665442 445666665 555566
Q ss_pred EEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCC
Q 002909 645 FRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG 701 (867)
Q Consensus 645 V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG 701 (867)
+.|-+.-++ ..-...+++. ||.++.+...- ....||.+.|+||++-.-.+
T Consensus 226 i~w~~~d~g---~NPY~~~La~-Adyii~TaDSi---nM~sEAasTgkPv~~~~~~~ 275 (329)
T COG3660 226 IVWNNEDTG---YNPYIDMLAA-ADYIISTADSI---NMCSEAASTGKPVFILEPPN 275 (329)
T ss_pred eEeCCCCCC---CCchHHHHhh-cceEEEecchh---hhhHHHhccCCCeEEEecCC
Confidence 778765333 2245677776 99999885422 24789999999999765433
No 161
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=94.78 E-value=1.6 Score=47.31 Aligned_cols=140 Identities=21% Similarity=0.321 Sum_probs=78.8
Q ss_pred CCcEEEEEeccCCcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEccccc
Q 002909 573 KKPIIFSMARLDTVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQT 652 (867)
Q Consensus 573 ~k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~ 652 (867)
.+.+++++|.=++ ||+. .+.++.+... ++++.||-+...| ....+.+.++++ +++.+.-.
T Consensus 158 ~r~ilI~lGGsDp-k~lt--~kvl~~L~~~--~~nl~iV~gs~~p----------~l~~l~k~~~~~---~~i~~~~~-- 217 (318)
T COG3980 158 KRDILITLGGSDP-KNLT--LKVLAELEQK--NVNLHIVVGSSNP----------TLKNLRKRAEKY---PNINLYID-- 217 (318)
T ss_pred hheEEEEccCCCh-hhhH--HHHHHHhhcc--CeeEEEEecCCCc----------chhHHHHHHhhC---CCeeeEec--
Confidence 4457888887665 5544 3445555442 3666554442221 134555555554 77887653
Q ss_pred CCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEe----cCCCCccceeec----CceEEEeCCCCHHHHH
Q 002909 653 DRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFA----TNQGGPAEIIID----GVSGFHIDPNNGDESS 724 (867)
Q Consensus 653 d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIa----t~~gG~~EiI~d----g~~G~lv~p~d~e~lA 724 (867)
..++.+++.+ ||+.+.. -|.++.||...|+|.++ .+.-..+.-... ...|++. ......
T Consensus 218 ----~~dma~LMke-~d~aI~A-----aGstlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~lg~~~~l~~~l---~~~~~~ 284 (318)
T COG3980 218 ----TNDMAELMKE-ADLAISA-----AGSTLYEALLLGVPSLVLPLAENQIATAKEFEALGIIKQLGYHL---KDLAKD 284 (318)
T ss_pred ----chhHHHHHHh-cchheec-----cchHHHHHHHhcCCceEEeeeccHHHHHHHHHhcCchhhccCCC---chHHHH
Confidence 3356777776 8887765 38999999999999332 232222221111 2345553 233444
Q ss_pred HHHHHHHHHhhcCHHHHHHHHHHHH
Q 002909 725 NKIADFFEKCKTDAGYWNQMSAAGR 749 (867)
Q Consensus 725 ~aI~~ll~~~~~dp~~~~~m~~~ar 749 (867)
..+.++. .|+..+..++...+
T Consensus 285 ~~~~~i~----~d~~~rk~l~~~~~ 305 (318)
T COG3980 285 YEILQIQ----KDYARRKNLSFGSK 305 (318)
T ss_pred HHHHHhh----hCHHHhhhhhhccc
Confidence 4454444 78888777765543
No 162
>PLN02670 transferase, transferring glycosyl groups
Probab=94.72 E-value=12 Score=44.22 Aligned_cols=50 Identities=12% Similarity=0.142 Sum_probs=37.2
Q ss_pred HHHHHHHHcCCCEEecCC----CCccceeecCceEEEeCC------CCHHHHHHHHHHHH
Q 002909 682 LTVIEAMNCGLPTFATNQ----GGPAEIIIDGVSGFHIDP------NNGDESSNKIADFF 731 (867)
Q Consensus 682 ltvlEAMa~GlPVIat~~----gG~~EiI~dg~~G~lv~p------~d~e~lA~aI~~ll 731 (867)
++++||+++|+|+|+... ...+..++..+.|..++. -+.++++++|.+++
T Consensus 368 nS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~~~~~~e~i~~av~~vm 427 (472)
T PLN02670 368 NSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERDGSFTSDSVAESVRLAM 427 (472)
T ss_pred chHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccCCcCcHHHHHHHHHHHh
Confidence 489999999999999754 334445555678887753 24788888888887
No 163
>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]
Probab=94.15 E-value=13 Score=42.37 Aligned_cols=96 Identities=21% Similarity=0.259 Sum_probs=56.7
Q ss_pred HHHHcCCCCcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCCc-cceeec-CceE
Q 002909 635 LIEKYQLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP-AEIIID-GVSG 712 (867)
Q Consensus 635 li~~~~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG~-~EiI~d-g~~G 712 (867)
+.....-..+|.+.. +.. ..++...++. +|++|-.-+ -+++=||+.|+|+|+-....= ..+.++ |-.|
T Consensus 258 ia~~~~~~~~i~~~~---d~~-~~~~~~~l~~-~dl~Vg~R~-----HsaI~al~~g~p~i~i~Y~~K~~~l~~~~gl~~ 327 (385)
T COG2327 258 IAQLVLDSAEILVSS---DEY-AEELGGILAA-CDLIVGMRL-----HSAIMALAFGVPAIAIAYDPKVRGLMQDLGLPG 327 (385)
T ss_pred HHhhcCCccceEeec---chH-HHHHHHHhcc-CceEEeehh-----HHHHHHHhcCCCeEEEeecHHHHHHHHHcCCCc
Confidence 333333336677654 111 3456667776 888885432 257889999999999654321 122221 3334
Q ss_pred EE--eCCCCHHHHHHHHHHHHHHhhcCHHHHHH
Q 002909 713 FH--IDPNNGDESSNKIADFFEKCKTDAGYWNQ 743 (867)
Q Consensus 713 ~l--v~p~d~e~lA~aI~~ll~~~~~dp~~~~~ 743 (867)
+. +.+.|.+.+.+...+.+. .+++.+++
T Consensus 328 ~~~~i~~~~~~~l~~~~~e~~~---~~~~~~~~ 357 (385)
T COG2327 328 FAIDIDPLDAEILSAVVLERLT---KLDELRER 357 (385)
T ss_pred ccccCCCCchHHHHHHHHHHHh---ccHHHHhh
Confidence 43 457778888888887774 45554443
No 164
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=94.08 E-value=0.36 Score=54.70 Aligned_cols=133 Identities=14% Similarity=0.169 Sum_probs=66.1
Q ss_pred cccccccCCCCcEEEEEeccCCcCCh------HHH--HHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHH
Q 002909 564 EHIGYLADRKKPIIFSMARLDTVKNI------TGL--TEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTL 635 (867)
Q Consensus 564 ~~lGll~~~~k~iIl~vGRL~~~Kgi------d~L--ieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~l 635 (867)
+.+|+ +.++.+|+|+-.+...... ... .+.+.. ....++.+++-.-.. +...
T Consensus 184 ~~~~~--~~~~k~ILyaPT~R~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~li~k~Hp~----------------~~~~ 243 (369)
T PF04464_consen 184 KKLGI--DKDKKVILYAPTWRDNSSNEYFKFFFSDLDFEKLNF--LLKNNYVLIIKPHPN----------------MKKK 243 (369)
T ss_dssp HHTT----SS-EEEEEE----GGG--GGSS----TT-HHHHHH--HHTTTEEEEE--SHH----------------HHTT
T ss_pred HHhcc--CCCCcEEEEeeccccccccccccccccccCHHHHHH--HhCCCcEEEEEeCch----------------hhhc
Confidence 44566 6777899999655432221 111 222322 234577777655321 1111
Q ss_pred HHH-cCCCCcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEec--CC-------CCccce
Q 002909 636 IEK-YQLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT--NQ-------GGPAEI 705 (867)
Q Consensus 636 i~~-~~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat--~~-------gG~~Ei 705 (867)
... ....++|.++.. ..+++.++.. +|++|. -++.++.|++.+++|||-. |. |...+
T Consensus 244 ~~~~~~~~~~i~~~~~------~~~~~~ll~~-aDiLIT-----DySSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~- 310 (369)
T PF04464_consen 244 FKDFKEDNSNIIFVSD------NEDIYDLLAA-ADILIT-----DYSSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFD- 310 (369)
T ss_dssp ----TT-TTTEEE-TT-------S-HHHHHHT--SEEEE-----SS-THHHHHGGGT--EEEE-TTTTTTTTTSSBSS--
T ss_pred hhhhhccCCcEEECCC------CCCHHHHHHh-cCEEEE-----echhHHHHHHHhCCCEEEEeccHHHHhhccCCCCc-
Confidence 221 344578888652 2257777776 999984 3567899999999999954 33 22222
Q ss_pred eecCceEEEeCCCCHHHHHHHHHHHH
Q 002909 706 IIDGVSGFHIDPNNGDESSNKIADFF 731 (867)
Q Consensus 706 I~dg~~G~lv~p~d~e~lA~aI~~ll 731 (867)
..+...|-.+. +.+++.++|..++
T Consensus 311 ~~~~~pg~~~~--~~~eL~~~i~~~~ 334 (369)
T PF04464_consen 311 YEEDLPGPIVY--NFEELIEAIENII 334 (369)
T ss_dssp TTTSSSS-EES--SHHHHHHHHTTHH
T ss_pred hHhhCCCceeC--CHHHHHHHHHhhh
Confidence 22333455654 8899999998877
No 165
>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes. It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY.
Probab=91.47 E-value=2.6 Score=45.86 Aligned_cols=80 Identities=14% Similarity=0.049 Sum_probs=47.7
Q ss_pred CCCeEEEECCC-ChHHHHHHHHHhcCCcEEEEEcCCccc-ccc-cchhhhh--hcCccccchhh-hhHHHHHHhcCCEEE
Q 002909 408 GKPDLIIGNYS-DGNLVASLMASKLGITQATIAHALEKS-KYE-DSDAKWK--ELDPKYHFSCQ-FTADLIAMNQTDFII 481 (867)
Q Consensus 408 ~kPDIIh~h~~-~~~l~a~lla~~~gip~V~t~H~l~~~-~~~-~s~~~~~--~~~~~y~f~~~-~~~e~ial~~aD~II 481 (867)
.+.||.|+... -+++++.+++.+.|+|++.|-|+...- ++. ...-.|. ...-+-.+... ....+.++..||.|+
T Consensus 171 P~advyHsvstGyAgl~g~~~k~~~g~P~lLTEHGIY~RER~~ei~~a~w~~~~~~~r~~wi~~f~~l~~~~Y~~Ad~I~ 250 (268)
T PF11997_consen 171 PKADVYHSVSTGYAGLLGALAKYRYGRPFLLTEHGIYTREREIEILQADWIWESPYVRDLWIRFFESLSRLAYRAADRIT 250 (268)
T ss_pred CCCCEEecCCccHHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhhCeec
Confidence 45699998754 458899999999999999999996421 110 0011111 00000000111 113455899999999
Q ss_pred ecCHHH
Q 002909 482 TSTYQE 487 (867)
Q Consensus 482 a~S~~~ 487 (867)
+.....
T Consensus 251 ~l~~~n 256 (268)
T PF11997_consen 251 PLYEYN 256 (268)
T ss_pred ccchhh
Confidence 998744
No 166
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=90.45 E-value=1.6 Score=47.39 Aligned_cols=99 Identities=13% Similarity=0.064 Sum_probs=62.5
Q ss_pred EEEEEeccCCcCC--hHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccccC
Q 002909 576 IIFSMARLDTVKN--ITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTD 653 (867)
Q Consensus 576 iIl~vGRL~~~Kg--id~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d 653 (867)
+++..|.-.+.|. .+...+.+..+.+. +++++++|+..+ .+..+++.+..+....+.+.|
T Consensus 124 i~i~~~~~~~~k~w~~~~~~~l~~~l~~~--~~~ivl~g~~~e------------~~~~~~i~~~~~~~~~~~~~~---- 185 (279)
T cd03789 124 VVLPPGASGPAKRWPAERFAALADRLLAR--GARVVLTGGPAE------------RELAEEIAAALGGPRVVNLAG---- 185 (279)
T ss_pred EEECCCCCCccccCCHHHHHHHHHHHHHC--CCEEEEEechhh------------HHHHHHHHHhcCCCccccCcC----
Confidence 4444444444444 35677777777654 788999987543 333444444443223344556
Q ss_pred CCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecC
Q 002909 654 RYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATN 698 (867)
Q Consensus 654 ~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~ 698 (867)
..+..|+..+++. ||++|.+. + |. +--|.+.|+|+|+--
T Consensus 186 ~~~l~e~~~li~~-~~l~I~~D---s-g~-~HlA~a~~~p~i~l~ 224 (279)
T cd03789 186 KTSLRELAALLAR-ADLVVTND---S-GP-MHLAAALGTPTVALF 224 (279)
T ss_pred CCCHHHHHHHHHh-CCEEEeeC---C-HH-HHHHHHcCCCEEEEE
Confidence 4567899999997 99999883 2 44 333569999999853
No 167
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=90.42 E-value=11 Score=40.73 Aligned_cols=105 Identities=14% Similarity=0.149 Sum_probs=61.2
Q ss_pred CCCCcEEEEEeccCCc-------CChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCC
Q 002909 571 DRKKPIIFSMARLDTV-------KNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQG 643 (867)
Q Consensus 571 ~~~k~iIl~vGRL~~~-------Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~ 643 (867)
..++++|++....... .+...+++.+..+.+..|+.+++|-=. |......+ ....++..-..
T Consensus 114 ~~~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~~~p~~~lvvK~H-P~~~~~~~----------~~~~~~~~~~~ 182 (269)
T PF05159_consen 114 SKNKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAKENPDAKLVVKPH-PDERGGNK----------YSYLEELPNLP 182 (269)
T ss_pred cCCCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHHHCCCCEEEEEEC-chhhCCCC----------hhHhhhhhcCC
Confidence 5677888888876554 245567777777777677888876543 21000000 02222221124
Q ss_pred cEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecC
Q 002909 644 QFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATN 698 (867)
Q Consensus 644 ~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~ 698 (867)
++.++.. .. .++.++.. ||.++.-+ +.+-+|||.+|+||++-.
T Consensus 183 ~~~~~~~---~~---~~~~Ll~~-s~~Vvtin-----StvGlEAll~gkpVi~~G 225 (269)
T PF05159_consen 183 NVVIIDD---DV---NLYELLEQ-SDAVVTIN-----STVGLEALLHGKPVIVFG 225 (269)
T ss_pred CeEEECC---CC---CHHHHHHh-CCEEEEEC-----CHHHHHHHHcCCceEEec
Confidence 4444432 22 34555655 77665432 578999999999999853
No 168
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=90.41 E-value=0.98 Score=53.34 Aligned_cols=134 Identities=13% Similarity=0.049 Sum_probs=73.9
Q ss_pred CCcEEEEEeccCCcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEccccc
Q 002909 573 KKPIIFSMARLDTVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQT 652 (867)
Q Consensus 573 ~k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~ 652 (867)
+..++++.|.+.. ...+..++++....+..+. ++++.-++.. .-.+++|+....|.+
T Consensus 276 ~~vv~vsfGs~~~-~~~~~~~~~~~~~~~~~~~-~~iW~~~~~~---------------------~~~l~~n~~~~~W~P 332 (500)
T PF00201_consen 276 KGVVYVSFGSIVS-SMPEEKLKEIAEAFENLPQ-RFIWKYEGEP---------------------PENLPKNVLIVKWLP 332 (500)
T ss_dssp TEEEEEE-TSSST-T-HHHHHHHHHHHHHCSTT-EEEEEETCSH---------------------GCHHHTTEEEESS--
T ss_pred CCEEEEecCcccc-hhHHHHHHHHHHHHhhCCC-cccccccccc---------------------cccccceEEEecccc
Confidence 4457788898753 2233333333333333344 6777665532 001346788888754
Q ss_pred CCCChHHHHHHHHc-cCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCC----CccceeecCceEEEeCCC--CHHHHHH
Q 002909 653 DRYRNGELYRCIAD-TKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQG----GPAEIIIDGVSGFHIDPN--NGDESSN 725 (867)
Q Consensus 653 d~v~~~el~~~la~-~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~g----G~~EiI~dg~~G~lv~p~--d~e~lA~ 725 (867)
..++. +. ..++||.= |--.++.||+.+|+|+|+-..- ..+..+++.+.|..++.. +.+++.+
T Consensus 333 ----Q~~lL---~hp~v~~fitH----gG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ 401 (500)
T PF00201_consen 333 ----QNDLL---AHPRVKLFITH----GGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKNDLTEEELRA 401 (500)
T ss_dssp ----HHHHH---TSTTEEEEEES------HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGGC-SHHHHHH
T ss_pred ----chhhh---hcccceeeeec----cccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEecCCcHHHHHH
Confidence 34444 32 13455532 2234899999999999997553 344555566678888654 4577888
Q ss_pred HHHHHHHHhhcCHHHHHHH
Q 002909 726 KIADFFEKCKTDAGYWNQM 744 (867)
Q Consensus 726 aI~~ll~~~~~dp~~~~~m 744 (867)
+|.+++ +|+.++++.
T Consensus 402 ai~~vl----~~~~y~~~a 416 (500)
T PF00201_consen 402 AIREVL----ENPSYKENA 416 (500)
T ss_dssp HHHHHH----HSHHHHHHH
T ss_pred HHHHHH----hhhHHHHHH
Confidence 887777 788765543
No 169
>PLN03004 UDP-glycosyltransferase
Probab=88.88 E-value=4.4 Score=47.50 Aligned_cols=84 Identities=13% Similarity=0.120 Sum_probs=54.2
Q ss_pred CcEEEcccccCCCChHHHHHHHHccCcE--EEEcCCCCCCCHHHHHHHHcCCCEEecCC----CCccceeec-CceEEEe
Q 002909 643 GQFRWIAAQTDRYRNGELYRCIADTKGA--FVQPALYEAFGLTVIEAMNCGLPTFATNQ----GGPAEIIID-GVSGFHI 715 (867)
Q Consensus 643 ~~V~flG~~~d~v~~~el~~~la~~aDv--fV~PS~~EgfGltvlEAMa~GlPVIat~~----gG~~EiI~d-g~~G~lv 715 (867)
.++.+.+|.+ ..++.. . +++ ||. . +--++++||+++|+|+|+... ...+..+.+ -+.|..+
T Consensus 334 ~g~~v~~W~P----Q~~iL~---H-~~v~~FvT--H--~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l 401 (451)
T PLN03004 334 KGMVVKSWAP----QVPVLN---H-KAVGGFVT--H--CGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISM 401 (451)
T ss_pred CcEEEEeeCC----HHHHhC---C-CccceEec--c--CcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEe
Confidence 4677777644 345444 3 666 552 1 123489999999999999744 444555543 3678777
Q ss_pred CC-----CCHHHHHHHHHHHHHHhhcCHHHHH
Q 002909 716 DP-----NNGDESSNKIADFFEKCKTDAGYWN 742 (867)
Q Consensus 716 ~p-----~d~e~lA~aI~~ll~~~~~dp~~~~ 742 (867)
+. -+.++++++|.+++ .|+++++
T Consensus 402 ~~~~~~~~~~e~l~~av~~vm----~~~~~r~ 429 (451)
T PLN03004 402 NESETGFVSSTEVEKRVQEII----GECPVRE 429 (451)
T ss_pred cCCcCCccCHHHHHHHHHHHh----cCHHHHH
Confidence 53 26788888888887 6655443
No 170
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=88.52 E-value=2.5 Score=44.77 Aligned_cols=103 Identities=17% Similarity=0.065 Sum_probs=59.1
Q ss_pred CCCcEEEEEeccCCcCChHH--HHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcc
Q 002909 572 RKKPIIFSMARLDTVKNITG--LTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIA 649 (867)
Q Consensus 572 ~~k~iIl~vGRL~~~Kgid~--LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG 649 (867)
++..+++..|.-.+.|.+.. ..+.+..+.+.. ++++++|+..+ .+.+....+.+... ...+.+.|
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~--~~vvl~g~~~~----------~~~~~~~~~~~~~~-~~~~~~~~ 170 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERG--YRVVLLGGPEE----------QEKEIADQIAAGLQ-NPVINLAG 170 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT---EEEE--SSHH----------HHHHHHHHHHTTHT-TTTEEETT
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhC--ceEEEEccchH----------HHHHHHHHHHHhcc-cceEeecC
Confidence 44556677776667776554 777777776543 78888888732 11222233333221 12677877
Q ss_pred cccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEec
Q 002909 650 AQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT 697 (867)
Q Consensus 650 ~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat 697 (867)
..+..|+..++.. ||++|.+ ++.+ +==|.|.|+|+|+-
T Consensus 171 ----~~~l~e~~ali~~-a~~~I~~---Dtg~--~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 171 ----KTSLRELAALISR-ADLVIGN---DTGP--MHLAAALGTPTVAL 208 (247)
T ss_dssp ----TS-HHHHHHHHHT-SSEEEEE---SSHH--HHHHHHTT--EEEE
T ss_pred ----CCCHHHHHHHHhc-CCEEEec---CChH--HHHHHHHhCCEEEE
Confidence 4568899999997 9999988 3333 34488999999986
No 171
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=88.26 E-value=3.5 Score=46.47 Aligned_cols=103 Identities=10% Similarity=0.037 Sum_probs=64.0
Q ss_pred CCcEEEEEeccCCcCChH--HHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEccc
Q 002909 573 KKPIIFSMARLDTVKNIT--GLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAA 650 (867)
Q Consensus 573 ~k~iIl~vGRL~~~Kgid--~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~ 650 (867)
++.+++..|.-.+.|... ...+.+..+.+ .+.+++++|+..+ .+.+..+++.+.......+.+.|
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~--~~~~vvl~ggp~e----------~e~~~~~~i~~~~~~~~~~~l~g- 249 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQA--RGYEVVLTSGPDK----------DDLACVNEIAQGCQTPPVTALAG- 249 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHH--CCCeEEEEcCCCh----------HHHHHHHHHHHhcCCCccccccC-
Confidence 345666767655666644 56666666644 3678888887533 11222233443332223355667
Q ss_pred ccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEec
Q 002909 651 QTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT 697 (867)
Q Consensus 651 ~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat 697 (867)
..+..|+..+++. ||+||... + |. +==|-|.|+|+|+-
T Consensus 250 ---~~sL~el~ali~~-a~l~v~nD---S-Gp-~HlAaA~g~P~v~l 287 (352)
T PRK10422 250 ---KTTFPELGALIDH-AQLFIGVD---S-AP-AHIAAAVNTPLICL 287 (352)
T ss_pred ---CCCHHHHHHHHHh-CCEEEecC---C-HH-HHHHHHcCCCEEEE
Confidence 5668899999997 99999873 2 32 33477999999984
No 172
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=87.83 E-value=66 Score=38.16 Aligned_cols=77 Identities=12% Similarity=0.062 Sum_probs=49.2
Q ss_pred CcEEEcccccCCCChHHHHHHHHccCcE--EEEcCCCCCCCHHHHHHHHcCCCEEecCCCC----cccee-ecCceEEEe
Q 002909 643 GQFRWIAAQTDRYRNGELYRCIADTKGA--FVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEII-IDGVSGFHI 715 (867)
Q Consensus 643 ~~V~flG~~~d~v~~~el~~~la~~aDv--fV~PS~~EgfGltvlEAMa~GlPVIat~~gG----~~EiI-~dg~~G~lv 715 (867)
.++.+.+|.+ ..++... ..+ ||.= +--++++||+.+|+|+|+....+ ....+ +.-+.|..+
T Consensus 338 rg~vv~~W~P----Q~~iL~h----~~vg~FitH----~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~ 405 (481)
T PLN02992 338 RGFVVPSWAP----QAEILAH----QAVGGFLTH----CGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRS 405 (481)
T ss_pred CCEEEeecCC----HHHHhCC----cccCeeEec----CchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEe
Confidence 4577777644 3455542 333 5532 22348999999999999975433 34444 244567777
Q ss_pred CC----CCHHHHHHHHHHHH
Q 002909 716 DP----NNGDESSNKIADFF 731 (867)
Q Consensus 716 ~p----~d~e~lA~aI~~ll 731 (867)
+. -+.++++++|.+++
T Consensus 406 ~~~~~~~~~~~l~~av~~vm 425 (481)
T PLN02992 406 DDPKEVISRSKIEALVRKVM 425 (481)
T ss_pred cCCCCcccHHHHHHHHHHHh
Confidence 53 36788889998887
No 173
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=87.22 E-value=4.5 Score=45.12 Aligned_cols=102 Identities=16% Similarity=0.021 Sum_probs=62.2
Q ss_pred CCCCc-EEEEEec-cCCcCChH--HHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEE
Q 002909 571 DRKKP-IIFSMAR-LDTVKNIT--GLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFR 646 (867)
Q Consensus 571 ~~~k~-iIl~vGR-L~~~Kgid--~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~ 646 (867)
+.+++ +++..|. ..+.|... ...+.+..+.+. +.+++++|+..+ .+..+++.+..+ ...+.
T Consensus 171 ~~~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~--~~~ivl~G~~~e------------~~~~~~i~~~~~-~~~~~ 235 (334)
T TIGR02195 171 DTERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQ--GYQVVLFGSAKD------------HPAGNEIEALLP-GELRN 235 (334)
T ss_pred CCCCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHC--CCEEEEEEChhh------------HHHHHHHHHhCC-ccccc
Confidence 33344 4455554 44666655 566666666542 578899987643 222333333321 12233
Q ss_pred EcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEec
Q 002909 647 WIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT 697 (867)
Q Consensus 647 flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat 697 (867)
+.| ..+..++..+++. ||++|... +-+ +==|-|.|+|+|+=
T Consensus 236 l~g----~~sL~el~ali~~-a~l~I~~D---SGp--~HlAaA~~~P~i~l 276 (334)
T TIGR02195 236 LAG----ETSLDEAVDLIAL-AKAVVTND---SGL--MHVAAALNRPLVAL 276 (334)
T ss_pred CCC----CCCHHHHHHHHHh-CCEEEeeC---CHH--HHHHHHcCCCEEEE
Confidence 556 5668899999997 99999873 322 33488999999984
No 174
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=84.07 E-value=7.1 Score=43.74 Aligned_cols=102 Identities=13% Similarity=0.069 Sum_probs=61.9
Q ss_pred CcEEEEEeccCCcCCh--HHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccc
Q 002909 574 KPIIFSMARLDTVKNI--TGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQ 651 (867)
Q Consensus 574 k~iIl~vGRL~~~Kgi--d~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~ 651 (867)
..+++..|.-.+.|.. +...+.+..+.+ .+.+++++|+..+ .+.+..+++.+..+-...+.+.|
T Consensus 182 ~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~--~~~~ivl~g~p~~----------~e~~~~~~i~~~~~~~~~~~l~g-- 247 (344)
T TIGR02201 182 NYIVIQPTSRWFFKCWDNDRFSALIDALHA--RGYEVVLTSGPDK----------DELAMVNEIAQGCQTPRVTSLAG-- 247 (344)
T ss_pred CEEEEeCCCCccccCCCHHHHHHHHHHHHh--CCCeEEEecCCCH----------HHHHHHHHHHhhCCCCcccccCC--
Confidence 3455666654455554 455555555544 2578899986532 11222333333333222344666
Q ss_pred cCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEec
Q 002909 652 TDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT 697 (867)
Q Consensus 652 ~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat 697 (867)
+.+..|+..+++. ||++|.. ++-+ +==|-|.|+|+|+=
T Consensus 248 --~~sL~el~ali~~-a~l~Vs~---DSGp--~HlAaA~g~p~v~L 285 (344)
T TIGR02201 248 --KLTLPQLAALIDH-ARLFIGV---DSVP--MHMAAALGTPLVAL 285 (344)
T ss_pred --CCCHHHHHHHHHh-CCEEEec---CCHH--HHHHHHcCCCEEEE
Confidence 5678999999997 9999987 3333 34488999999984
No 175
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=83.77 E-value=12 Score=44.10 Aligned_cols=140 Identities=17% Similarity=0.186 Sum_probs=70.5
Q ss_pred CCcEEEEEeccC--CcCChHHHHHHHHHhHccCCCeEEEE-EeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcc
Q 002909 573 KKPIIFSMARLD--TVKNITGLTEWYGKNKRLRNMVNLVV-VAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIA 649 (867)
Q Consensus 573 ~k~iIl~vGRL~--~~Kgid~LieA~~~l~~~~~~v~LvI-VG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG 649 (867)
+.-+.++.|.+. +.+.+..+..++..+.. ++++ +.+........+.+............++ ..++..+.+
T Consensus 261 ~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~-----~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~--~~~~g~v~~ 333 (455)
T PLN02152 261 SSVIYVSFGTMVELSKKQIEELARALIEGKR-----PFLWVITDKLNREAKIEGEEETEIEKIAGFRHE--LEEVGMIVS 333 (455)
T ss_pred CceEEEEecccccCCHHHHHHHHHHHHHcCC-----CeEEEEecCcccccccccccccccccchhHHHh--ccCCeEEEe
Confidence 355677788765 34555666666665532 3444 3321110000000000000001122222 235666667
Q ss_pred cccCCCChHHHHHHHHccCcE--EEEcCCCCCCCHHHHHHHHcCCCEEecCC----CCccceeecC-ceEEEeC-----C
Q 002909 650 AQTDRYRNGELYRCIADTKGA--FVQPALYEAFGLTVIEAMNCGLPTFATNQ----GGPAEIIIDG-VSGFHID-----P 717 (867)
Q Consensus 650 ~~~d~v~~~el~~~la~~aDv--fV~PS~~EgfGltvlEAMa~GlPVIat~~----gG~~EiI~dg-~~G~lv~-----p 717 (867)
|.+ ..++.. . ..+ ||.= +-.++++||+.+|+|+|+-.. ...+..+.+. +.|+-+. .
T Consensus 334 W~P----Q~~iL~---h-~~vg~fvtH----~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~ 401 (455)
T PLN02152 334 WCS----QIEVLR---H-RAVGCFVTH----CGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEGL 401 (455)
T ss_pred eCC----HHHHhC---C-cccceEEee----CCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCcCCc
Confidence 644 345444 2 443 4432 223589999999999999754 3333444331 2455542 1
Q ss_pred CCHHHHHHHHHHHH
Q 002909 718 NNGDESSNKIADFF 731 (867)
Q Consensus 718 ~d~e~lA~aI~~ll 731 (867)
-+.+++++++.+++
T Consensus 402 ~~~e~l~~av~~vm 415 (455)
T PLN02152 402 VERGEIRRCLEAVM 415 (455)
T ss_pred CcHHHHHHHHHHHH
Confidence 26788999998887
No 176
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=83.39 E-value=8.3 Score=42.62 Aligned_cols=99 Identities=14% Similarity=-0.017 Sum_probs=62.3
Q ss_pred CCcEEEEEeccCCcCCh--HHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEccc
Q 002909 573 KKPIIFSMARLDTVKNI--TGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAA 650 (867)
Q Consensus 573 ~k~iIl~vGRL~~~Kgi--d~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~ 650 (867)
++.+++..|.=.+.|.. +...+.+..+.+. +++++++|+++. +.+..+++.+..+ +..+.|
T Consensus 179 ~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~--~~~~vl~~g~~~-----------e~~~~~~i~~~~~---~~~l~g- 241 (319)
T TIGR02193 179 APYAVLLHATSRDDKTWPEERWRELARLLLAR--GLQIVLPWGNDA-----------EKQRAERIAEALP---GAVVLP- 241 (319)
T ss_pred CCEEEEEeCCCcccCCCCHHHHHHHHHHHHHC--CCeEEEeCCCHH-----------HHHHHHHHHhhCC---CCeecC-
Confidence 34556666654566665 3566666666542 678888866543 2233344444332 235566
Q ss_pred ccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEec
Q 002909 651 QTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT 697 (867)
Q Consensus 651 ~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat 697 (867)
..+..|+..+++. ||++|.. ++-+ +==|-|.|+|+|+-
T Consensus 242 ---~~sL~el~ali~~-a~l~I~~---DSgp--~HlAaa~g~P~i~l 279 (319)
T TIGR02193 242 ---KMSLAEVAALLAG-ADAVVGV---DTGL--THLAAALDKPTVTL 279 (319)
T ss_pred ---CCCHHHHHHHHHc-CCEEEeC---CChH--HHHHHHcCCCEEEE
Confidence 5678899999997 9999987 3333 33377899999984
No 177
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=82.78 E-value=57 Score=35.66 Aligned_cols=86 Identities=15% Similarity=0.112 Sum_probs=51.2
Q ss_pred hHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccccCCCChHHHHHHHHccC
Q 002909 589 ITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTDRYRNGELYRCIADTK 668 (867)
Q Consensus 589 id~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d~v~~~el~~~la~~a 668 (867)
++.+.+++..+.+. .+.+++++..... .| .+..+++.+.+.-...| +. ..+..|+...++. +
T Consensus 190 ~~~l~~~l~~l~~~-~g~~v~~i~~~~~----~D------~~~~~~l~~~~~~~~~i--~~----~~~~~e~~~~i~~-~ 251 (298)
T TIGR03609 190 LLRLLRALDRLQRD-TGAFVLFLPFQQP----QD------LPLARALRDQLLGPAEV--LS----PLDPEELLGLFAS-A 251 (298)
T ss_pred HHHHHHHHHHHHHh-hCCeEEEEeCCcc----hh------HHHHHHHHHhcCCCcEE--Ee----cCCHHHHHHHHhh-C
Confidence 55677777776553 2456656554321 11 22333444444322333 22 2457789999987 9
Q ss_pred cEEEEcCCCCCCCHHHHHHHHcCCCEEec
Q 002909 669 GAFVQPALYEAFGLTVIEAMNCGLPTFAT 697 (867)
Q Consensus 669 DvfV~PS~~EgfGltvlEAMa~GlPVIat 697 (867)
|++|-... -.++=|+.+|+|+|+-
T Consensus 252 ~~vI~~Rl-----H~~I~A~~~gvP~i~i 275 (298)
T TIGR03609 252 RLVIGMRL-----HALILAAAAGVPFVAL 275 (298)
T ss_pred CEEEEech-----HHHHHHHHcCCCEEEe
Confidence 98886543 2567799999999965
No 178
>PF03401 TctC: Tripartite tricarboxylate transporter family receptor; InterPro: IPR005064 Bordetella pertussis, the causative agent of human whooping cough (pertussis), is an obligate human pathogen with diverse high-affinity transport systems for the assimilation of iron, a biometal that is essential for growth []. Periplasmic binding proteins of a new family, particularly well represented in this organism (and more generally in beta-proteobacteria), have been called Bug receptors []. They adopt a characteristic Venus flytrap fold with two globular domains bisected by a ligand-binding cleft. The family is specific for carboxylated solutes, with a characteristic mode of binding involving two highly conserved beta strand-beta turn-alpha helix motifs originating from each domain. These two motifs form hydrogen bonds with a carboxylate group of the ligand, both directly and via conserved water molecules, and have thus been termed the carboxylate pincers. Domain 1 recognises the ligand and the carboxylate group serves as an initial anchoring point. Domain 2 discriminates between productively and non-productively bound ligands as proper interactions with this domain is needed for the of the closed conformation []. BugE has a glutamate bound ligand. No charged residues are involved in glutamate binding by BugE, unlike what has been described for all glutamate receptors reported so far. The Bug architecture is highly conserved despite limited sequence identity [].; GO: 0030288 outer membrane-bounded periplasmic space; PDB: 2QPQ_C 2DVZ_A 2F5X_A.
Probab=82.09 E-value=21 Score=38.87 Aligned_cols=150 Identities=17% Similarity=0.215 Sum_probs=86.1
Q ss_pred CcEEEEEeccCCcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccccC
Q 002909 574 KPIIFSMARLDTVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTD 653 (867)
Q Consensus 574 k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d 653 (867)
.+.++.++.=.+.|+++.|+++.+.... .+.+-..|.|.. ..-....+.++.|++ ++++++...
T Consensus 78 ~~~vl~v~~dsp~~t~~eli~~ak~~p~---~~~~g~~g~g~~-----------~hl~~~~l~~~~G~~--~~~Vpy~G~ 141 (274)
T PF03401_consen 78 DPNVLVVRADSPYKTLEELIEYAKANPG---KLTFGSSGPGSS-----------DHLAAALLAKAAGIK--FTHVPYDGG 141 (274)
T ss_dssp EEEEEEEETTSS-SSHHHHHHHHHCSCC---C-EEEESSTTSH-----------HHHHHHHHHHHHT-----EEEE-SSH
T ss_pred cceEEEEeCCCccccHHHHHHHHHhCCC---CeEEEecCCCch-----------HHHHHHHHHHHhCCc--eEEEEeCCc
Confidence 3567777777789999999999875432 344444443322 112334556677764 555554322
Q ss_pred CCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcC------------------CCEEecCCCCccceeecCceEEEe
Q 002909 654 RYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCG------------------LPTFATNQGGPAEIIIDGVSGFHI 715 (867)
Q Consensus 654 ~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~G------------------lPVIat~~gG~~EiI~dg~~G~lv 715 (867)
.+.+..++....|+.+.. .-........| +|++. .. |..++....-.|+.+
T Consensus 142 ---~~~~~allgG~vd~~~~~------~~~~~~~~~~G~~k~Lav~~~~r~~~~pdvPT~~-E~-G~~d~~~~~~~g~~~ 210 (274)
T PF03401_consen 142 ---AEALTALLGGHVDAAFGS------PGEALPYVEAGDLKPLAVFSDERSPALPDVPTFK-EQ-GYPDIVFGSWRGLFA 210 (274)
T ss_dssp ---HHHHHHHHTTSSSEEEEE------HHHHHHHHHTTSEEEEEECSSS-BTTCTTS-BTT-TT-T-TTG--EEEEEEEE
T ss_pred ---cHHHHHHhCCeeeEEeec------HHHHHHHHhCCCceEEEEecCccccccCCCCCHH-Hh-Cccceeeeeeeeeec
Confidence 455666776667776643 11233333333 23221 11 233333345569999
Q ss_pred CCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHH
Q 002909 716 DPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQ 750 (867)
Q Consensus 716 ~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~ 750 (867)
+++-+++..+++.+++++..+||+..+.+.+.+..
T Consensus 211 p~gtp~~~~~~l~~a~~~~~~~pe~~~~~~~~g~~ 245 (274)
T PF03401_consen 211 PKGTPDEIVDKLADAIKKALEDPEFQEFLEKMGLE 245 (274)
T ss_dssp ETTS-HHHHHHHHHHHHHHHT-HHHHHHHHHHTEE
T ss_pred CCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHCCCc
Confidence 99999999999999999999999988877776654
No 179
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=80.29 E-value=6.6 Score=39.38 Aligned_cols=59 Identities=20% Similarity=0.230 Sum_probs=36.5
Q ss_pred CCCeEEEECCCChHHH-HHHHHHh--c-CCcEEEEEcCCcc-cccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEe
Q 002909 408 GKPDLIIGNYSDGNLV-ASLMASK--L-GITQATIAHALEK-SKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIIT 482 (867)
Q Consensus 408 ~kPDIIh~h~~~~~l~-a~lla~~--~-gip~V~t~H~l~~-~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa 482 (867)
.+||+|+|.++..+.+ ...+.++ . ++|+++.+-++.. .. .| .-..+|..++
T Consensus 88 ~~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tvvTD~~~~H~------~W------------------~~~~~D~y~V 143 (169)
T PF06925_consen 88 FQPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTVVTDFDTVHP------FW------------------IHPGVDRYFV 143 (169)
T ss_pred cCCCEEEECCcchhhhHHHHHHHhhcccCCcEEEEEcCCCCCCc------Ce------------------ecCCCCEEEE
Confidence 5999999988876444 4433333 3 4776644433221 11 12 2367999999
Q ss_pred cCHHHHhh
Q 002909 483 STYQEIAG 490 (867)
Q Consensus 483 ~S~~~~~~ 490 (867)
.|++.++.
T Consensus 144 ase~~~~~ 151 (169)
T PF06925_consen 144 ASEEVKEE 151 (169)
T ss_pred CCHHHHHH
Confidence 99887763
No 180
>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes. It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important.
Probab=79.50 E-value=7 Score=39.28 Aligned_cols=76 Identities=13% Similarity=0.090 Sum_probs=42.0
Q ss_pred CCCeEEEECC-CChHHHHHHHHHhcCCcEEEEEcCCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHH
Q 002909 408 GKPDLIIGNY-SDGNLVASLMASKLGITQATIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQ 486 (867)
Q Consensus 408 ~kPDIIh~h~-~~~~l~a~lla~~~gip~V~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~ 486 (867)
..+|+|.+.. .+......+.....++|.+..+|.... .|+.+...- -+..|.+ ......-.||.|+.+|..
T Consensus 58 ~~~dll~aTsmldLa~l~gL~p~l~~~p~ilYFHENQl-~YP~~~~~~--rd~~~~~-----~ni~saLaAD~v~FNS~~ 129 (168)
T PF12038_consen 58 HSYDLLFATSMLDLATLRGLRPDLANVPKILYFHENQL-AYPVSPGQE--RDFQYGM-----NNIYSALAADRVVFNSAF 129 (168)
T ss_pred cCCCEEEeeccccHHHHHhhccCCCCCCEEEEEecCcc-cCCCCCCcc--ccccHHH-----HHHHHHHhceeeeecchh
Confidence 4679999764 333333333334567999999997432 233222111 1111211 233356789999999985
Q ss_pred HHhhc
Q 002909 487 EIAGS 491 (867)
Q Consensus 487 ~~~~~ 491 (867)
..+.+
T Consensus 130 nr~sF 134 (168)
T PF12038_consen 130 NRDSF 134 (168)
T ss_pred hHHHH
Confidence 55433
No 181
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=78.89 E-value=13 Score=41.74 Aligned_cols=99 Identities=15% Similarity=0.074 Sum_probs=67.3
Q ss_pred CcEEEEEe-ccCCcCChH--HHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEccc
Q 002909 574 KPIIFSMA-RLDTVKNIT--GLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAA 650 (867)
Q Consensus 574 k~iIl~vG-RL~~~Kgid--~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~ 650 (867)
+.+++..| .-...|+.. ...+.+..+.+.+ .++++.|+..+ .+..+++.+.++ ..+.+.|
T Consensus 176 ~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~--~~Vvl~g~~~e------------~e~~~~i~~~~~--~~~~l~~- 238 (334)
T COG0859 176 PYIVINPGASRGSAKRWPLEHYAELAELLIAKG--YQVVLFGGPDE------------EERAEEIAKGLP--NAVILAG- 238 (334)
T ss_pred CeEEEeccccccccCCCCHHHHHHHHHHHHHCC--CEEEEecChHH------------HHHHHHHHHhcC--CccccCC-
Confidence 45666777 565777655 5666666666654 88999998732 344555555553 2233566
Q ss_pred ccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecC
Q 002909 651 QTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATN 698 (867)
Q Consensus 651 ~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~ 698 (867)
+.+..++..+++. ||++|.+.. |+ +==|-|.|+|+|+--
T Consensus 239 ---k~sL~e~~~li~~-a~l~I~~DS----g~-~HlAaA~~~P~I~iy 277 (334)
T COG0859 239 ---KTSLEELAALIAG-ADLVIGNDS----GP-MHLAAALGTPTIALY 277 (334)
T ss_pred ---CCCHHHHHHHHhc-CCEEEccCC----hH-HHHHHHcCCCEEEEE
Confidence 6778899999987 999998732 33 334889999999953
No 182
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=77.36 E-value=16 Score=36.97 Aligned_cols=63 Identities=22% Similarity=0.174 Sum_probs=41.8
Q ss_pred CCCeEEEECCCChHHHHHHHHHhc------CCcEEEEEcCCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEE
Q 002909 408 GKPDLIIGNYSDGNLVASLMASKL------GITQATIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFII 481 (867)
Q Consensus 408 ~kPDIIh~h~~~~~l~a~lla~~~------gip~V~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~II 481 (867)
.+||+|++|.+.......++++.+ |.++|++-= ....+-+ | ...++.+.-+|..+
T Consensus 91 ~rPdvii~nGpg~~vp~~~~~~l~~~~~~~~~kiIyIES-~aRv~~l---------------S---lTGklly~~aD~f~ 151 (170)
T PF08660_consen 91 ERPDVIISNGPGTCVPVCLAAKLLRLLGLRGSKIIYIES-FARVKTL---------------S---LTGKLLYPFADRFI 151 (170)
T ss_pred hCCCEEEEcCCceeeHHHHHHHHHHHhhccCCcEEEEEe-eeecCCC---------------c---hHHHHHHHhCCEEE
Confidence 489999999998877777788887 888876531 1111100 0 11234666799999
Q ss_pred ecCHHHHh
Q 002909 482 TSTYQEIA 489 (867)
Q Consensus 482 a~S~~~~~ 489 (867)
+--++.++
T Consensus 152 VQW~~l~~ 159 (170)
T PF08660_consen 152 VQWEELAE 159 (170)
T ss_pred EcCHHHHh
Confidence 98877655
No 183
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=77.32 E-value=5.9 Score=36.01 Aligned_cols=83 Identities=16% Similarity=0.202 Sum_probs=55.4
Q ss_pred EEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccccCCCChHH--HHHHHHccCcEEEEcCCCCCCC---H
Q 002909 608 LVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTDRYRNGE--LYRCIADTKGAFVQPALYEAFG---L 682 (867)
Q Consensus 608 LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d~v~~~e--l~~~la~~aDvfV~PS~~EgfG---l 682 (867)
++|||+..+ ....+++.++++|. .+.++|... .....+ +...+.. +|++|++..+=+-. .
T Consensus 2 vliVGG~~~-----------~~~~~~~~~~~~G~--~~~~hg~~~-~~~~~~~~l~~~i~~-aD~VIv~t~~vsH~~~~~ 66 (97)
T PF10087_consen 2 VLIVGGRED-----------RERRYKRILEKYGG--KLIHHGRDG-GDEKKASRLPSKIKK-ADLVIVFTDYVSHNAMWK 66 (97)
T ss_pred EEEEcCCcc-----------cHHHHHHHHHHcCC--EEEEEecCC-CCccchhHHHHhcCC-CCEEEEEeCCcChHHHHH
Confidence 678888432 25778888999875 345553222 233334 7888877 99999887654433 3
Q ss_pred HHHHHHHcCCCEEecCCCCccce
Q 002909 683 TVIEAMNCGLPTFATNQGGPAEI 705 (867)
Q Consensus 683 tvlEAMa~GlPVIat~~gG~~Ei 705 (867)
+--+|-..|+|++-++..|...+
T Consensus 67 vk~~akk~~ip~~~~~~~~~~~l 89 (97)
T PF10087_consen 67 VKKAAKKYGIPIIYSRSRGVSSL 89 (97)
T ss_pred HHHHHHHcCCcEEEECCCCHHHH
Confidence 45677788999999987666544
No 184
>PLN02167 UDP-glycosyltransferase family protein
Probab=77.29 E-value=82 Score=37.25 Aligned_cols=79 Identities=15% Similarity=0.132 Sum_probs=47.7
Q ss_pred CcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCC----ccc-eeecCceEEEeCC
Q 002909 643 GQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAE-IIIDGVSGFHIDP 717 (867)
Q Consensus 643 ~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG----~~E-iI~dg~~G~lv~p 717 (867)
++..+.+|.+ ..++...= +.++||.= -|+ ++++||+++|+|+|+....+ .+. ++..-+.|..+..
T Consensus 340 ~rg~v~~w~P----Q~~iL~h~--~vg~fvtH---~G~-nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~ 409 (475)
T PLN02167 340 GRGLVCGWAP----QVEILAHK--AIGGFVSH---CGW-NSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRL 409 (475)
T ss_pred cCeeeeccCC----HHHHhcCc--ccCeEEee---CCc-ccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeec
Confidence 4455567643 44555421 24456643 223 37999999999999975433 332 2334456776642
Q ss_pred ---------CCHHHHHHHHHHHH
Q 002909 718 ---------NNGDESSNKIADFF 731 (867)
Q Consensus 718 ---------~d~e~lA~aI~~ll 731 (867)
-+.++++++|.+++
T Consensus 410 ~~~~~~~~~~~~~~l~~av~~~m 432 (475)
T PLN02167 410 DYVSAYGEIVKADEIAGAVRSLM 432 (475)
T ss_pred ccccccCCcccHHHHHHHHHHHh
Confidence 25678888888877
No 185
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=76.70 E-value=17 Score=40.24 Aligned_cols=97 Identities=15% Similarity=0.095 Sum_probs=58.6
Q ss_pred cEEEEEeccCCcCChH--HHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEccccc
Q 002909 575 PIIFSMARLDTVKNIT--GLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQT 652 (867)
Q Consensus 575 ~iIl~vGRL~~~Kgid--~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~ 652 (867)
.+++..|.-...|... ...+.+..+.+ .+.++++.|+++. +.+..+++.+. ..++.+.|
T Consensus 180 ~i~~~~~~s~~~k~Wp~e~~a~li~~l~~--~~~~ivl~~G~~~-----------e~~~~~~i~~~---~~~~~l~g--- 240 (322)
T PRK10964 180 YLVFLHATTRDDKHWPEAHWRELIGLLAP--SGLRIKLPWGAEH-----------EEQRAKRLAEG---FPYVEVLP--- 240 (322)
T ss_pred eEEEEeCCCcccccCCHHHHHHHHHHHHH--CCCeEEEeCCCHH-----------HHHHHHHHHcc---CCcceecC---
Confidence 3333444333445543 56666666644 2567777644432 12223333332 13466767
Q ss_pred CCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEec
Q 002909 653 DRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT 697 (867)
Q Consensus 653 d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat 697 (867)
..+..|+..+++. ||++|... + | .+==|-|+|+|+|+-
T Consensus 241 -~~sL~elaali~~-a~l~I~nD---S-G-p~HlA~A~g~p~val 278 (322)
T PRK10964 241 -KLSLEQVARVLAG-AKAVVSVD---T-G-LSHLTAALDRPNITL 278 (322)
T ss_pred -CCCHHHHHHHHHh-CCEEEecC---C-c-HHHHHHHhCCCEEEE
Confidence 4678999999997 99999873 2 2 244488999999985
No 186
>PLN00164 glucosyltransferase; Provisional
Probab=76.16 E-value=33 Score=40.63 Aligned_cols=65 Identities=11% Similarity=0.028 Sum_probs=41.4
Q ss_pred HHHHHHHHcCCCEEecCC----CCcccee-ecCceEEEeCC-------CCHHHHHHHHHHHHHHhhcCHH-HHHHHHHHH
Q 002909 682 LTVIEAMNCGLPTFATNQ----GGPAEII-IDGVSGFHIDP-------NNGDESSNKIADFFEKCKTDAG-YWNQMSAAG 748 (867)
Q Consensus 682 ltvlEAMa~GlPVIat~~----gG~~EiI-~dg~~G~lv~p-------~d~e~lA~aI~~ll~~~~~dp~-~~~~m~~~a 748 (867)
++++||+++|+|+|+-.. .-....+ +.-+.|+.+.. -+.++++++|.+++ .+++ ..+++.+++
T Consensus 368 nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~~~~~e~l~~av~~vm----~~~~~~~~~~r~~a 443 (480)
T PLN00164 368 NSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKRDNFVEAAELERAVRSLM----GGGEEEGRKAREKA 443 (480)
T ss_pred chHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccccCCcCcHHHHHHHHHHHh----cCCchhHHHHHHHH
Confidence 379999999999999744 3344333 33457777642 25688888888887 5543 244444444
Q ss_pred HH
Q 002909 749 RQ 750 (867)
Q Consensus 749 r~ 750 (867)
.+
T Consensus 444 ~~ 445 (480)
T PLN00164 444 AE 445 (480)
T ss_pred HH
Confidence 33
No 187
>PLN02555 limonoid glucosyltransferase
Probab=75.97 E-value=44 Score=39.63 Aligned_cols=94 Identities=12% Similarity=0.113 Sum_probs=56.3
Q ss_pred CCcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCC----CccceeecC-ceEEEeC
Q 002909 642 QGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQG----GPAEIIIDG-VSGFHID 716 (867)
Q Consensus 642 ~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~g----G~~EiI~dg-~~G~lv~ 716 (867)
.+++.+.+|.+ ..++... .+.++||.= -| -++++||+.+|+|+|+...- .....+.+. +.|+-+.
T Consensus 336 ~~~g~v~~W~P----Q~~iL~H--~~v~~FvtH---~G-~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~ 405 (480)
T PLN02555 336 GDKGKIVQWCP----QEKVLAH--PSVACFVTH---CG-WNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLC 405 (480)
T ss_pred CCceEEEecCC----HHHHhCC--CccCeEEec---CC-cchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEcc
Confidence 46677777644 4455532 135566643 12 34899999999999997543 334444443 6677662
Q ss_pred -----C--CCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHH
Q 002909 717 -----P--NNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQ 750 (867)
Q Consensus 717 -----p--~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~ 750 (867)
. -+.++++++|.+++ .+++ .++|.+++++
T Consensus 406 ~~~~~~~~v~~~~v~~~v~~vm----~~~~-g~~~r~ra~~ 441 (480)
T PLN02555 406 RGEAENKLITREEVAECLLEAT----VGEK-AAELKQNALK 441 (480)
T ss_pred CCccccCcCcHHHHHHHHHHHh----cCch-HHHHHHHHHH
Confidence 1 14678888888877 4432 3444444443
No 188
>PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia.
Probab=74.63 E-value=36 Score=38.46 Aligned_cols=162 Identities=14% Similarity=0.184 Sum_probs=102.8
Q ss_pred cccccc-CCCCcEEEEEeccCCcCChHHHHHHHHHhHccCCC-eEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCC-
Q 002909 565 HIGYLA-DRKKPIIFSMARLDTVKNITGLTEWYGKNKRLRNM-VNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQL- 641 (867)
Q Consensus 565 ~lGll~-~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~~-v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L- 641 (867)
++|+-. .+.+.+-++=-+++-.|+.-.=+=+....-+..|+ +..+.|-.... ..+...+..++..+.+
T Consensus 180 ~FGY~p~~~~~RvavfEPNi~vvK~~~~PmLi~E~aYR~~P~~v~~~~V~Nt~~---------~ke~~~F~~f~~~ldlv 250 (364)
T PF10933_consen 180 RFGYQPGRPGKRVAVFEPNISVVKTCFIPMLICEEAYRADPDAVEHVYVTNTYH---------LKEHPTFVNFANSLDLV 250 (364)
T ss_pred ccccccCCCCceEEEecCCceEEeecCccHHHHHHHHHhChhhcceEEEecchh---------hhcCHHHHHHHHhhHHh
Confidence 456633 22334444445666677744333223333233333 55666665533 1223445556665554
Q ss_pred -CCcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCCccceeecCceEEEeCCCCH
Q 002909 642 -QGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDPNNG 720 (867)
Q Consensus 642 -~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~p~d~ 720 (867)
++..+|.| +. ++..+++...|++|.=.+--+......||+--|=|.|-. ...+. .+|+.++..|.
T Consensus 251 r~gkasfeg----R~---~~p~fla~~tD~VvSHqWeN~lNYlY~daLyggYPLVHN-----S~~l~--d~GYYY~~fD~ 316 (364)
T PF10933_consen 251 RDGKASFEG----RF---DFPDFLAQHTDAVVSHQWENPLNYLYYDALYGGYPLVHN-----SPLLK--DVGYYYPDFDA 316 (364)
T ss_pred hcCeeEEee----ec---ChHHHHHhCCCEEEeccccchhhHHHHHHHhcCCCcccC-----cchhc--ccCcCCCCccH
Confidence 57788988 32 456677777899997776666777899999999998853 23443 38999999999
Q ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHH
Q 002909 721 DESSNKIADFFEKCKTDAGYWNQMSAAGRQRI 752 (867)
Q Consensus 721 e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v 752 (867)
.+-+++|.+++. +..+.++...+++++.+
T Consensus 317 ~~G~r~L~~A~~---~HD~~~~~Y~~ra~~~l 345 (364)
T PF10933_consen 317 FEGARQLLRAIR---EHDADLDAYRARARRLL 345 (364)
T ss_pred HHHHHHHHHHHH---HccccHHHHHHHHHHHH
Confidence 999999999885 44455666666666655
No 189
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=73.84 E-value=21 Score=40.12 Aligned_cols=99 Identities=15% Similarity=0.054 Sum_probs=59.2
Q ss_pred cEEEEEec-cCCcCChH--HHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCC--Cc-EEEc
Q 002909 575 PIIFSMAR-LDTVKNIT--GLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQ--GQ-FRWI 648 (867)
Q Consensus 575 ~iIl~vGR-L~~~Kgid--~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~--~~-V~fl 648 (867)
.+++..|. ..+.|... .+.+....+.+ .+++++++|+..+ .+...++.+..+-. .+ +.+.
T Consensus 182 ~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~--~~~~vvl~Gg~~e------------~~~~~~i~~~~~~~~~~~~~~l~ 247 (348)
T PRK10916 182 IIGFCPGAEFGPAKRWPHYHYAELAQQLID--EGYQVVLFGSAKD------------HEAGNEILAALNTEQQAWCRNLA 247 (348)
T ss_pred EEEEeCCCCCccccCCCHHHHHHHHHHHHH--CCCeEEEEeCHHh------------HHHHHHHHHhcccccccceeecc
Confidence 34455554 33556543 45555555543 3678899987643 22233333333211 12 4455
Q ss_pred ccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEec
Q 002909 649 AAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT 697 (867)
Q Consensus 649 G~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat 697 (867)
| ..+..|+..+++. |+++|..- + |. +==|-|.|+|+|+=
T Consensus 248 g----~~sL~el~ali~~-a~l~I~nD---T-Gp-~HlAaA~g~P~val 286 (348)
T PRK10916 248 G----ETQLEQAVILIAA-CKAIVTND---S-GL-MHVAAALNRPLVAL 286 (348)
T ss_pred C----CCCHHHHHHHHHh-CCEEEecC---C-hH-HHHHHHhCCCEEEE
Confidence 5 4568899999997 99999873 2 22 34488999999973
No 190
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=73.46 E-value=19 Score=36.94 Aligned_cols=71 Identities=15% Similarity=0.121 Sum_probs=28.8
Q ss_pred CCeEEEECCCChHHHHHHHHHhcCCcEEEEEcCCcccccccchhhhhhcCccccchhhhhHHHHHHhcCCEEEecCHHHH
Q 002909 409 KPDLIIGNYSDGNLVASLMASKLGITQATIAHALEKSKYEDSDAKWKELDPKYHFSCQFTADLIAMNQTDFIITSTYQEI 488 (867)
Q Consensus 409 kPDIIh~h~~~~~l~a~lla~~~gip~V~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~ial~~aD~IIa~S~~~~ 488 (867)
+||+++.-..+.-.-....+++.|+|++..---+..... ..|.....+ -+..++..|.|.+.|+..+
T Consensus 95 ~P~~~i~~EtElWPnll~~a~~~~ip~~LvNarls~~s~-----------~~~~~~~~~--~r~~l~~f~~i~aqs~~da 161 (186)
T PF04413_consen 95 RPDLLIWVETELWPNLLREAKRRGIPVVLVNARLSERSF-----------RRYRRFPFL--FRPLLSRFDRILAQSEADA 161 (186)
T ss_dssp --SEEEEES----HHHHHH-----S-EEEEEE-------------------------HH--HHHHGGG-SEEEESSHHHH
T ss_pred CCCEEEEEccccCHHHHHHHhhcCCCEEEEeeeeccccc-----------hhhhhhHHH--HHHHHHhCCEEEECCHHHH
Confidence 899988765443222233467889998755322211110 111111111 2236789999999999888
Q ss_pred hhcC
Q 002909 489 AGSK 492 (867)
Q Consensus 489 ~~~k 492 (867)
+.+.
T Consensus 162 ~r~~ 165 (186)
T PF04413_consen 162 ERFR 165 (186)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7444
No 191
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=71.44 E-value=48 Score=39.84 Aligned_cols=188 Identities=14% Similarity=0.120 Sum_probs=118.6
Q ss_pred cccccccCCCCcEEEEEeccCCcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCC-
Q 002909 564 EHIGYLADRKKPIIFSMARLDTVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQ- 642 (867)
Q Consensus 564 ~~lGll~~~~k~iIl~vGRL~~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~- 642 (867)
..+|+ +++..++.....|-+ =-...++.+.++.+.-|+-.|++.--..- -...++..+.+.|++
T Consensus 751 ~~y~L--p~d~vvf~~FNqLyK--idP~~l~~W~~ILk~VPnS~LwllrfPa~-----------ge~rf~ty~~~~Gl~p 815 (966)
T KOG4626|consen 751 SQYGL--PEDAVVFCNFNQLYK--IDPSTLQMWANILKRVPNSVLWLLRFPAV-----------GEQRFRTYAEQLGLEP 815 (966)
T ss_pred CCCCC--CCCeEEEeechhhhc--CCHHHHHHHHHHHHhCCcceeEEEecccc-----------chHHHHHHHHHhCCCc
Confidence 45777 677766666666543 33566777777777778888877654322 125678889999985
Q ss_pred CcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCCccc-----eeecCceEEEeCC
Q 002909 643 GQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAE-----IIIDGVSGFHIDP 717 (867)
Q Consensus 643 ~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG~~E-----iI~dg~~G~lv~p 717 (867)
++|.|..- ...+|-.+-..- +||.+-+..+-|. .|-.|.+.+|+|+|+-.-.-.+. .+..-+.|-++ .
T Consensus 816 ~riifs~v----a~k~eHvrr~~L-aDv~LDTplcnGh-TTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hli-a 888 (966)
T KOG4626|consen 816 DRIIFSPV----AAKEEHVRRGQL-ADVCLDTPLCNGH-TTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLI-A 888 (966)
T ss_pred cceeeccc----cchHHHHHhhhh-hhhcccCcCcCCc-ccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHH-h
Confidence 68888773 223454554444 7888877665543 34678899999999743211111 11112233344 3
Q ss_pred CCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH--HhCCHHHHHHHHHHHHhHHHHHHHhh
Q 002909 718 NNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIY--ECYTWKIYANKVLNMGSIYGFWRQIN 779 (867)
Q Consensus 718 ~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~--~~ysw~~~a~~ll~ly~~~~f~~~~~ 779 (867)
.+-++..+.-.++- .|.+..+++...-+..-. --|+-..++..++.+|. ..|+.--
T Consensus 889 k~~eEY~~iaV~La----td~~~L~~lr~~l~~~r~~splfd~~q~~~~LE~~y~--~MW~~y~ 946 (966)
T KOG4626|consen 889 KNREEYVQIAVRLA----TDKEYLKKLRAKLRKARASSPLFDTKQYAKGLERLYL--QMWKKYC 946 (966)
T ss_pred hhHHHHHHHHHHhh----cCHHHHHHHHHHHHHHhcCCCccCchHHHHHHHHHHH--HHHHHhc
Confidence 46777777666665 888888887766554332 35888999999888753 4666543
No 192
>PLN03015 UDP-glucosyl transferase
Probab=71.20 E-value=2.2e+02 Score=33.68 Aligned_cols=50 Identities=14% Similarity=0.153 Sum_probs=32.8
Q ss_pred HHHHHHHHcCCCEEecCCCC----cccee-ecCceEEEeC------CCCHHHHHHHHHHHH
Q 002909 682 LTVIEAMNCGLPTFATNQGG----PAEII-IDGVSGFHID------PNNGDESSNKIADFF 731 (867)
Q Consensus 682 ltvlEAMa~GlPVIat~~gG----~~EiI-~dg~~G~lv~------p~d~e~lA~aI~~ll 731 (867)
++++||+.+|+|+|+....+ .+..+ +.-+.|.-+. .-..++++++|..++
T Consensus 364 nS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~~~~v~~e~i~~~v~~lm 424 (470)
T PLN03015 364 SSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPSEKVIGREEVASLVRKIV 424 (470)
T ss_pred hhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEecccccCCccCHHHHHHHHHHHH
Confidence 48999999999999975532 23333 2334566553 125577888887776
No 193
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=70.40 E-value=5.5 Score=37.97 Aligned_cols=27 Identities=30% Similarity=0.452 Sum_probs=20.3
Q ss_pred cccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEec
Q 002909 303 TGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTR 341 (867)
Q Consensus 303 tGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~ 341 (867)
++|-+.-.+ -|+++|+++||+|. +.|.
T Consensus 8 t~Ghv~P~l--------ala~~L~~rGh~V~----~~~~ 34 (139)
T PF03033_consen 8 TRGHVYPFL--------ALARALRRRGHEVR----LATP 34 (139)
T ss_dssp SHHHHHHHH--------HHHHHHHHTT-EEE----EEET
T ss_pred ChhHHHHHH--------HHHHHHhccCCeEE----Eeec
Confidence 567766666 57778889999999 8886
No 194
>PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis. CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ].
Probab=69.18 E-value=1.5e+02 Score=30.82 Aligned_cols=96 Identities=17% Similarity=0.095 Sum_probs=54.5
Q ss_pred cCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccccCCCChHHHHHHHH
Q 002909 586 VKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTDRYRNGELYRCIA 665 (867)
Q Consensus 586 ~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d~v~~~el~~~la 665 (867)
..-.+.+.+.+..+.+....+.++.+...... +. ...............++..+.. ..+..++..+++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~---~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 256 (286)
T PF04230_consen 189 EEYIEEIAELIQRLLDKGYKIVLLPFSPSDDD------ED---DDDFNEIDIKAEKFFNVIIIDY---SLSPDELLELIS 256 (286)
T ss_pred hhHHHHHHHHHHHhhcccceeEEEEeeeccch------hh---HHHHHhhhhhcccccceeEecC---CCCHHHHHHHHh
Confidence 34455566677766664444555555544331 00 1111111100223344555443 345789999999
Q ss_pred ccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCC
Q 002909 666 DTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQ 699 (867)
Q Consensus 666 ~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~ 699 (867)
. ++++|.... -..+=|+++|+|+|+-..
T Consensus 257 ~-~~~~Is~Rl-----H~~I~a~~~g~P~i~i~y 284 (286)
T PF04230_consen 257 Q-ADLVISMRL-----HGAILALSLGVPVIAISY 284 (286)
T ss_pred c-CCEEEecCC-----HHHHHHHHcCCCEEEEec
Confidence 7 999997754 256779999999998643
No 195
>PLN02764 glycosyltransferase family protein
Probab=69.05 E-value=1.4e+02 Score=35.12 Aligned_cols=91 Identities=11% Similarity=0.056 Sum_probs=54.2
Q ss_pred EEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCC----ccceeec-CceEEEeCC--
Q 002909 645 FRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEIIID-GVSGFHIDP-- 717 (867)
Q Consensus 645 V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG----~~EiI~d-g~~G~lv~p-- 717 (867)
+.+.+|.+ ..++... . ++++||.= +--++++||+.+|+|+|+....+ .+..+.+ -+.|+.+..
T Consensus 319 ~v~~~W~P----Q~~vL~h-~-~v~~FvtH----~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~ 388 (453)
T PLN02764 319 VVWGGWVQ----QPLILSH-P-SVGCFVSH----CGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREE 388 (453)
T ss_pred cEEeCCCC----HHHHhcC-c-ccCeEEec----CCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEecccc
Confidence 45556543 4566552 1 24556643 22357999999999999976543 3444433 356766532
Q ss_pred ---CCHHHHHHHHHHHHHHhhcCH-HHHHHHHHHHH
Q 002909 718 ---NNGDESSNKIADFFEKCKTDA-GYWNQMSAAGR 749 (867)
Q Consensus 718 ---~d~e~lA~aI~~ll~~~~~dp-~~~~~m~~~ar 749 (867)
-+.+++.+++.+++ .++ +..+++.++++
T Consensus 389 ~~~~~~e~i~~av~~vm----~~~~~~g~~~r~~a~ 420 (453)
T PLN02764 389 TGWFSKESLRDAINSVM----KRDSEIGNLVKKNHT 420 (453)
T ss_pred CCccCHHHHHHHHHHHh----cCCchhHHHHHHHHH
Confidence 26788888888887 553 33444444443
No 196
>PLN02207 UDP-glycosyltransferase
Probab=67.71 E-value=1.4e+02 Score=35.44 Aligned_cols=79 Identities=15% Similarity=0.151 Sum_probs=47.2
Q ss_pred CcEEEcccccCCCChHHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEecCCCC----ccceeec-CceEEEeC-
Q 002909 643 GQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEIIID-GVSGFHID- 716 (867)
Q Consensus 643 ~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~~gG----~~EiI~d-g~~G~lv~- 716 (867)
+++...+|.+ ..++...= +.+.||.= -|+ ++++||+.+|+|+|+....+ .+..+.+ -+.|.-+.
T Consensus 332 ~~g~i~~W~P----Q~~IL~H~--~vg~FvTH---~Gw-nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~ 401 (468)
T PLN02207 332 GRGMICGWSP----QVEILAHK--AVGGFVSH---CGW-NSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKL 401 (468)
T ss_pred CCeEEEEeCC----HHHHhccc--ccceeeec---Ccc-ccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEec
Confidence 5555667644 44555531 13445532 122 37899999999999975433 3443333 34565331
Q ss_pred --------CCCHHHHHHHHHHHH
Q 002909 717 --------PNNGDESSNKIADFF 731 (867)
Q Consensus 717 --------p~d~e~lA~aI~~ll 731 (867)
.-+.++++++|.+++
T Consensus 402 ~~~~~~~~~v~~e~i~~av~~vm 424 (468)
T PLN02207 402 DYRVHSDEIVNANEIETAIRCVM 424 (468)
T ss_pred ccccccCCcccHHHHHHHHHHHH
Confidence 126688999998888
No 197
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=67.08 E-value=33 Score=35.59 Aligned_cols=37 Identities=19% Similarity=0.179 Sum_probs=25.6
Q ss_pred ceEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCC
Q 002909 281 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLI 343 (867)
Q Consensus 281 ~rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~ 343 (867)
|||++....|+- .-|. . .|.+.|.+.||+|. |+++..
T Consensus 1 M~ILlTNDDGi~----------a~Gi----~--------aL~~~L~~~g~~V~----VvAP~~ 37 (196)
T PF01975_consen 1 MRILLTNDDGID----------APGI----R--------ALAKALSALGHDVV----VVAPDS 37 (196)
T ss_dssp SEEEEE-SS-TT----------SHHH----H--------HHHHHHTTTSSEEE----EEEESS
T ss_pred CeEEEEcCCCCC----------CHHH----H--------HHHHHHHhcCCeEE----EEeCCC
Confidence 899999999873 3333 3 45557777789999 999864
No 198
>PRK02122 glucosamine-6-phosphate deaminase-like protein; Validated
Probab=62.19 E-value=21 Score=43.96 Aligned_cols=42 Identities=38% Similarity=0.610 Sum_probs=29.6
Q ss_pred CCcceEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecC
Q 002909 278 PNMFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRL 342 (867)
Q Consensus 278 pm~~rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~ 342 (867)
|..+||++||||- .+.++|- ||. ...|+++||+|+ |+++|..
T Consensus 367 ~~~~rvLv~spHP---DDevi~~---GGT---------------larl~~~G~~V~--vv~~TsG 408 (652)
T PRK02122 367 PYPKRVIIFSPHP---DDDVISM---GGT---------------FRRLVEQGHDVH--VAYQTSG 408 (652)
T ss_pred cCCceEEEEEeCC---CchHhhh---HHH---------------HHHHHHCCCcEE--EEEecCC
Confidence 4568999999984 2445654 776 125788999999 6666654
No 199
>COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain [Signal transduction mechanisms / Transcription]
Probab=61.97 E-value=35 Score=33.91 Aligned_cols=165 Identities=17% Similarity=0.145 Sum_probs=95.3
Q ss_pred CCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccccCCCChHHHHHHHHccCcE--EEEcCCCCCCC
Q 002909 604 NMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTDRYRNGELYRCIADTKGA--FVQPALYEAFG 681 (867)
Q Consensus 604 ~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d~v~~~el~~~la~~aDv--fV~PS~~EgfG 681 (867)
|+-.|+||-+... +...|..-.++-|.. |.... +.+|.........=. +|---...+.|
T Consensus 8 pd~~lllvdDD~~-----------f~~~LaRa~e~RGf~--v~~a~------~~~eal~~art~~PayAvvDlkL~~gsG 68 (182)
T COG4567 8 PDKSLLLVDDDTP-----------FLRTLARAMERRGFA--VVTAE------SVEEALAAARTAPPAYAVVDLKLGDGSG 68 (182)
T ss_pred CCceeEEecCChH-----------HHHHHHHHHhccCce--eEeec------cHHHHHHHHhcCCCceEEEEeeecCCCc
Confidence 4446777776532 445555555555542 22222 134444433321212 22223356899
Q ss_pred HHHHHHHHcCCC----EEecCCCCcc---ceeecCceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Q 002909 682 LTVIEAMNCGLP----TFATNQGGPA---EIIIDGVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYE 754 (867)
Q Consensus 682 ltvlEAMa~GlP----VIat~~gG~~---EiI~dg~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~ 754 (867)
+.++|++..-.| ||.|..|.++ +.|+-|.+-++..|-|.+++..++..- .++.......+-.. ..
T Consensus 69 L~~i~~lr~~~~d~rivvLTGy~sIATAV~AvKlGA~~YLaKPAdaDdi~aAl~~~------~~d~~~~~~~~pmS--~~ 140 (182)
T COG4567 69 LAVIEALRERRADMRIVVLTGYASIATAVEAVKLGACDYLAKPADADDILAALLRR------EPDEDTAPPENPMS--AD 140 (182)
T ss_pred hHHHHHHHhcCCcceEEEEecchHHHHHHHHHHhhhhhhcCCCCChHHHHHHHhhc------CCCcccCCCCCCCc--hh
Confidence 999999987654 6777776654 445568888999999999988887543 12222222222211 14
Q ss_pred hCCHHHHHHHHHHHHhHHHHHHHhhccchHHHHHHHHHHHHhhhhhcccCCC
Q 002909 755 CYTWKIYANKVLNMGSIYGFWRQINKEPKLAKQRYIQMFYSLLFRKLASNVP 806 (867)
Q Consensus 755 ~ysw~~~a~~ll~ly~~~~f~~~~~~~~~~~~~~yle~~~~L~~r~la~~vp 806 (867)
+.-|+.+-+-|... ..+-.++.|.+.|-...+.|.+++..|
T Consensus 141 rl~WEhIqrvl~e~-----------~~NiSeTARrL~MHRRTLqRkL~KR~~ 181 (182)
T COG4567 141 RLRWEHIQRVLEEC-----------EGNISETARRLNMHRRTLQRKLAKRAP 181 (182)
T ss_pred HhhHHHHHHHHHHh-----------CCCHHHHHHHhhhhHHHHHHHHhccCC
Confidence 56677666555541 122346777777877778888887653
No 200
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=59.52 E-value=20 Score=38.95 Aligned_cols=69 Identities=10% Similarity=0.118 Sum_probs=45.9
Q ss_pred HHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcC-CCEEecCC--CCccceeecCceEEEeCCCCHHHHHHHH
Q 002909 658 GELYRCIADTKGAFVQPALYEAFGLTVIEAMNCG-LPTFATNQ--GGPAEIIIDGVSGFHIDPNNGDESSNKI 727 (867)
Q Consensus 658 ~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~G-lPVIat~~--gG~~EiI~dg~~G~lv~p~d~e~lA~aI 727 (867)
.+....|+. +...++|.-...+..-++|||++| +|||.++. -...+++.=....+.++..+..++-+.|
T Consensus 228 ~~~~~~l~~-S~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~ldw~~fsv~v~~~~~~~l~~iL 299 (302)
T PF03016_consen 228 SEYMELLRN-SKFCLCPRGDGPWSRRLYEALAAGCIPVIISDDYVLPFEDVLDWSRFSVRVPEADLPELPEIL 299 (302)
T ss_pred hHHHHhccc-CeEEEECCCCCcccchHHHHhhhceeeEEecCcccCCcccccCHHHEEEEECHHHHHHHHHHH
Confidence 345666665 778888876666888999999999 58887653 3345566434566777755554444433
No 201
>PRK13932 stationary phase survival protein SurE; Provisional
Probab=56.73 E-value=1.4e+02 Score=32.42 Aligned_cols=38 Identities=21% Similarity=0.219 Sum_probs=26.6
Q ss_pred CcceEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCC
Q 002909 279 NMFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLI 343 (867)
Q Consensus 279 m~~rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~ 343 (867)
|.|||++....|+. .=|. . .|++.|.+.| +|. |+++..
T Consensus 4 ~~M~ILltNDDGi~----------a~Gi----~--------aL~~~l~~~g-~V~----VvAP~~ 41 (257)
T PRK13932 4 KKPHILVCNDDGIE----------GEGI----H--------VLAASMKKIG-RVT----VVAPAE 41 (257)
T ss_pred CCCEEEEECCCCCC----------CHHH----H--------HHHHHHHhCC-CEE----EEcCCC
Confidence 56899999999884 2233 2 3455677778 788 998853
No 202
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=56.49 E-value=11 Score=38.68 Aligned_cols=33 Identities=21% Similarity=0.395 Sum_probs=25.9
Q ss_pred ceEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecC
Q 002909 281 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRL 342 (867)
Q Consensus 281 ~rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~ 342 (867)
|||+|++..|+- |- +++++..++||+|+ -++|.
T Consensus 1 mKIaiIgAsG~~------------Gs-------------~i~~EA~~RGHeVT----AivRn 33 (211)
T COG2910 1 MKIAIIGASGKA------------GS-------------RILKEALKRGHEVT----AIVRN 33 (211)
T ss_pred CeEEEEecCchh------------HH-------------HHHHHHHhCCCeeE----EEEeC
Confidence 799999877752 22 56678889999999 88884
No 203
>COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism]
Probab=54.83 E-value=2.6e+02 Score=31.11 Aligned_cols=105 Identities=15% Similarity=0.107 Sum_probs=60.9
Q ss_pred HHHHHHHHCCCceeeccEEEecCCCCCCCCCCCCcc--ccccCCCCeEEEEccCCCcccccccccccccchhhHHHHHHH
Q 002909 320 ELLLRIKQQGLSVKPQILVVTRLIPNSKGTKCSQEL--EPIYDTKHSHILRIPFKTEQAILPQWVSRFDIYPYLGRFAQD 397 (867)
Q Consensus 320 eLa~~L~~~GheV~~~V~VvT~~~~~~~g~~~~~~~--e~i~~~~~v~I~rvp~~~~~~~l~~~isr~~i~p~l~~f~~~ 397 (867)
.|..+|.++||.|- |+.+-+..|-..|...+++. +.....+|+-|-.+|.+..-| -+|+ -..+
T Consensus 70 ~L~~~l~~~G~rVa--VlAVDPSSp~TGGsiLGDRiRM~~~~~~~~vFiRs~~srG~lG----GlS~---------at~~ 134 (323)
T COG1703 70 ALGRELRERGHRVA--VLAVDPSSPFTGGSILGDRIRMQRLAVDPGVFIRSSPSRGTLG----GLSR---------ATRE 134 (323)
T ss_pred HHHHHHHHCCcEEE--EEEECCCCCCCCccccccHhhHHhhccCCCeEEeecCCCccch----hhhH---------HHHH
Confidence 67778999999999 33333333434566555543 444445688888888776533 1221 1223
Q ss_pred HHHHHHHHcCCCCeEEEECCCChHHHHHHHHHhcCCcEEEEEcCC
Q 002909 398 ATAKILDLMEGKPDLIIGNYSDGNLVASLMASKLGITQATIAHAL 442 (867)
Q Consensus 398 ~~~~i~~~l~~kPDIIh~h~~~~~l~a~lla~~~gip~V~t~H~l 442 (867)
+...+.+ ..+|+|+......+..-.-++..-.+-++++..+.
T Consensus 135 ~i~~ldA---aG~DvIIVETVGvGQsev~I~~~aDt~~~v~~pg~ 176 (323)
T COG1703 135 AIKLLDA---AGYDVIIVETVGVGQSEVDIANMADTFLVVMIPGA 176 (323)
T ss_pred HHHHHHh---cCCCEEEEEecCCCcchhHHhhhcceEEEEecCCC
Confidence 3333333 48999998765544433344455555566666654
No 204
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=53.23 E-value=3.1e+02 Score=29.17 Aligned_cols=139 Identities=12% Similarity=0.008 Sum_probs=72.2
Q ss_pred HHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccccCCCChHHHHHHHHccCc
Q 002909 590 TGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTDRYRNGELYRCIADTKG 669 (867)
Q Consensus 590 d~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d~v~~~el~~~la~~aD 669 (867)
....+-+..+.+ -.+++.+|..... +++.++++ .++|+|.-. ....+++ .. ++
T Consensus 35 ~VA~RK~~~Ll~--~gA~VtVVap~i~-------------~el~~l~~----~~~i~~~~r---~~~~~dl----~g-~~ 87 (223)
T PRK05562 35 KAAFIKGKTFLK--KGCYVYILSKKFS-------------KEFLDLKK----YGNLKLIKG---NYDKEFI----KD-KH 87 (223)
T ss_pred HHHHHHHHHHHh--CCCEEEEEcCCCC-------------HHHHHHHh----CCCEEEEeC---CCChHHh----CC-Cc
Confidence 333443444443 3577777776544 33444433 356777752 1222332 33 66
Q ss_pred EEEEcCCCCCCCH-HHHHHHHcCCCEEecCCCCccceeec-----CceEEEe-CCCCHHHHHHHHHHHHHHhhcCHHHHH
Q 002909 670 AFVQPALYEAFGL-TVIEAMNCGLPTFATNQGGPAEIIID-----GVSGFHI-DPNNGDESSNKIADFFEKCKTDAGYWN 742 (867)
Q Consensus 670 vfV~PS~~EgfGl-tvlEAMa~GlPVIat~~gG~~EiI~d-----g~~G~lv-~p~d~e~lA~aI~~ll~~~~~dp~~~~ 742 (867)
+++..+--+...- ..-+|.+.|.+|.+.+.....+++.+ |.--+-+ ..+..-.++..|.+-++....+-+.+.
T Consensus 88 LViaATdD~~vN~~I~~~a~~~~~lvn~vd~p~~~dFi~PAiv~rg~l~IaIST~G~sP~lar~lR~~ie~~l~~~~~l~ 167 (223)
T PRK05562 88 LIVIATDDEKLNNKIRKHCDRLYKLYIDCSDYKKGLCIIPYQRSTKNFVFALNTKGGSPKTSVFIGEKVKNFLKKYDDFI 167 (223)
T ss_pred EEEECCCCHHHHHHHHHHHHHcCCeEEEcCCcccCeEEeeeEEecCCEEEEEECCCcCcHHHHHHHHHHHHHHHHHHHHH
Confidence 5555544333333 44566677999998876655555433 2211112 223344666666666655554444455
Q ss_pred HHHHHHHHHHHHh
Q 002909 743 QMSAAGRQRIYEC 755 (867)
Q Consensus 743 ~m~~~ar~~v~~~ 755 (867)
++....|+.+.+.
T Consensus 168 ~~l~~~R~~vk~~ 180 (223)
T PRK05562 168 EYVTKIRNKAKKN 180 (223)
T ss_pred HHHHHHHHHHHhh
Confidence 5555666666553
No 205
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=50.63 E-value=52 Score=35.61 Aligned_cols=85 Identities=14% Similarity=0.015 Sum_probs=44.5
Q ss_pred HHHHcCCC-CcE-EEcccccCCCChHHHHHHHHccCcEEEEcCCCC--CCCHHHHHHHHcCCCEEecCCCCccceeecCc
Q 002909 635 LIEKYQLQ-GQF-RWIAAQTDRYRNGELYRCIADTKGAFVQPALYE--AFGLTVIEAMNCGLPTFATNQGGPAEIIIDGV 710 (867)
Q Consensus 635 li~~~~L~-~~V-~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E--gfGltvlEAMa~GlPVIat~~gG~~EiI~dg~ 710 (867)
.+.++|++ +++ -.-|..+. ..+.++++.+ .+|++|.=-..+ |+--++--|+.+|+|||.-+-.-... +
T Consensus 166 ~~~~~G~~~~~iia~~gPfs~-e~n~al~~~~--~i~~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP~~~~----~- 237 (256)
T TIGR00715 166 QALKLGFPSDRIIAMRGPFSE-ELEKALLREY--RIDAVVTKASGEQGGELEKVKAAEALGINVIRIARPQTIP----G- 237 (256)
T ss_pred HHHHcCCChhcEEEEeCCCCH-HHHHHHHHHc--CCCEEEEcCCCCccchHHHHHHHHHcCCcEEEEeCCCCCC----C-
Confidence 45556653 232 33342221 1233444433 367777654333 44557888999999999876653211 0
Q ss_pred eEEEeCCCCHHHHHHHHHHH
Q 002909 711 SGFHIDPNNGDESSNKIADF 730 (867)
Q Consensus 711 ~G~lv~p~d~e~lA~aI~~l 730 (867)
+-.+ ++.+++.+.+.+.
T Consensus 238 -~~~~--~~~~el~~~l~~~ 254 (256)
T TIGR00715 238 -VAIF--DDISQLNQFVARL 254 (256)
T ss_pred -CccC--CCHHHHHHHHHHh
Confidence 1122 3666666666543
No 206
>COG1647 Esterase/lipase [General function prediction only]
Probab=50.61 E-value=37 Score=35.91 Aligned_cols=44 Identities=16% Similarity=0.157 Sum_probs=29.6
Q ss_pred HHHHHHHHHHcCCCCeEEEECCCChHHHHHHHHHhcCCcEEEEEcC
Q 002909 396 QDATAKILDLMEGKPDLIIGNYSDGNLVASLMASKLGITQATIAHA 441 (867)
Q Consensus 396 ~~~~~~i~~~l~~kPDIIh~h~~~~~l~a~lla~~~gip~V~t~H~ 441 (867)
.+..+.+... +-.-|..+-.+.++..+.+++....++-++.+-+
T Consensus 73 ~d~Y~~L~~~--gy~eI~v~GlSmGGv~alkla~~~p~K~iv~m~a 116 (243)
T COG1647 73 EDGYRDLKEA--GYDEIAVVGLSMGGVFALKLAYHYPPKKIVPMCA 116 (243)
T ss_pred HHHHHHHHHc--CCCeEEEEeecchhHHHHHHHhhCCccceeeecC
Confidence 3444444433 3445667778999999999999888776655543
No 207
>TIGR00087 surE 5'/3'-nucleotidase SurE. E. coli SurE is Recommended cutoffs are 15 for homology, 40 for probable orthology, and 200 for orthology with full-length homology.
Probab=50.10 E-value=1.9e+02 Score=31.16 Aligned_cols=35 Identities=29% Similarity=0.409 Sum_probs=22.8
Q ss_pred CCCCeEEEE--CC---------CChHHHHHHHHHhcCCcEEEEEcC
Q 002909 407 EGKPDLIIG--NY---------SDGNLVASLMASKLGITQATIAHA 441 (867)
Q Consensus 407 ~~kPDIIh~--h~---------~~~~l~a~lla~~~gip~V~t~H~ 441 (867)
..+||+|++ |. +.+...|.+-+...|+|-+-.-..
T Consensus 84 ~~~pDLVvSGiN~G~N~g~~v~ySGTVgAA~ea~~~GipaiA~S~~ 129 (244)
T TIGR00087 84 PEVPDLVISGINAGENLGTDVTYSGTVGAAMEAAIHGVPAIAISLQ 129 (244)
T ss_pred cCCCCeEEeccccCCCCCccEecchhHHHHHHHHHcCCCeEEEEec
Confidence 468999994 21 123345666677889999866553
No 208
>PF15024 Glyco_transf_18: Glycosyltransferase family 18
Probab=48.90 E-value=1.6e+02 Score=35.48 Aligned_cols=160 Identities=13% Similarity=0.092 Sum_probs=99.9
Q ss_pred CCcEEEEEeccC-CcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccc
Q 002909 573 KKPIIFSMARLD-TVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQ 651 (867)
Q Consensus 573 ~k~iIl~vGRL~-~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~ 651 (867)
.++.-+..|.-. -+||-+..++++.+.. .++-.|.+.... ...+++-|.=+|
T Consensus 276 r~~~AlVyGK~~~~w~~k~~~l~~l~~~~----eih~tV~~~~~~---------------------~~~~P~~V~NHG-- 328 (559)
T PF15024_consen 276 RKNQALVYGKERYMWKGKEKYLDVLHKYM----EIHGTVYDEPQR---------------------PPNVPSFVKNHG-- 328 (559)
T ss_pred ccceeEEEccchhhhcCcHHHHHHHHhhc----EEEEEeccCCCC---------------------CcccchhhhhcC--
Confidence 344445555533 3677788888776543 355555443321 012233344445
Q ss_pred cCCCChHHHHHHHHccCcEEEEcCC-CCCCCHHHHHHHHcCCCEEecCCCCccc-----eee------------------
Q 002909 652 TDRYRNGELYRCIADTKGAFVQPAL-YEAFGLTVIEAMNCGLPTFATNQGGPAE-----III------------------ 707 (867)
Q Consensus 652 ~d~v~~~el~~~la~~aDvfV~PS~-~EgfGltvlEAMa~GlPVIat~~gG~~E-----iI~------------------ 707 (867)
..+..|+...+.. +-|||---. +| |-+.+||+|.|+|.|-.....+.. ...
T Consensus 329 --~l~~~ef~~lL~~-akvfiGlGfP~E--gPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY~e~~ 403 (559)
T PF15024_consen 329 --ILSGDEFQQLLRK-AKVFIGLGFPYE--GPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPYAEEF 403 (559)
T ss_pred --cCCHHHHHHHHHh-hhEeeecCCCCC--CCChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccCChHHHhh
Confidence 3456789999987 889986532 45 557899999999988876543321 111
Q ss_pred -cCceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhHHHHHHH
Q 002909 708 -DGVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKVLNMGSIYGFWRQ 777 (867)
Q Consensus 708 -dg~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll~ly~~~~f~~~ 777 (867)
..-.-+.|+-+|.+++-++|.+++. .+- --++--.||-+.+.+|+..+.+--.|+..
T Consensus 404 iG~PhVytVd~~n~~~v~~Avk~il~----~~v---------~Py~P~efT~egmLeRv~~~ie~q~fC~~ 461 (559)
T PF15024_consen 404 IGEPHVYTVDINNSTEVEAAVKAILA----TPV---------EPYLPYEFTCEGMLERVNALIEKQDFCDK 461 (559)
T ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHh----cCC---------CCcCCcccCHHHHHHHHHHHHHhhhhccc
Confidence 1123677899999999999999883 221 12333578888888888887776666553
No 209
>PLN02534 UDP-glycosyltransferase
Probab=47.22 E-value=4.4e+02 Score=31.44 Aligned_cols=77 Identities=12% Similarity=0.082 Sum_probs=45.2
Q ss_pred CcEEEcccccCCCChHHHHHHHHccCcE--EEEcCCCCCCCHHHHHHHHcCCCEEecCCCC----ccceee-cCceEEEe
Q 002909 643 GQFRWIAAQTDRYRNGELYRCIADTKGA--FVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEIII-DGVSGFHI 715 (867)
Q Consensus 643 ~~V~flG~~~d~v~~~el~~~la~~aDv--fV~PS~~EgfGltvlEAMa~GlPVIat~~gG----~~EiI~-dg~~G~lv 715 (867)
.++.+.||.+ ..++.. ..++ ||.- +-.++++||+++|+|+|+....+ ....+. .-+.|+-+
T Consensus 344 ~g~~v~~w~p----q~~iL~----h~~v~~fvtH----~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~ 411 (491)
T PLN02534 344 RGLLIKGWAP----QVLILS----HPAIGGFLTH----CGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRV 411 (491)
T ss_pred CCeeccCCCC----HHHHhc----CCccceEEec----CccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEe
Confidence 4667777644 345544 2444 5533 23458999999999999976533 222222 22233332
Q ss_pred C---------------CCCHHHHHHHHHHHH
Q 002909 716 D---------------PNNGDESSNKIADFF 731 (867)
Q Consensus 716 ~---------------p~d~e~lA~aI~~ll 731 (867)
. --+.+++++++.+++
T Consensus 412 ~~~~~~~~~~~~~~~~~v~~eev~~~v~~~m 442 (491)
T PLN02534 412 GVEVPVRWGDEERVGVLVKKDEVEKAVKTLM 442 (491)
T ss_pred cccccccccccccccCccCHHHHHHHHHHHh
Confidence 1 025678888888887
No 210
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=45.81 E-value=3.8e+02 Score=31.29 Aligned_cols=137 Identities=14% Similarity=0.166 Sum_probs=72.5
Q ss_pred CcEEEEEeccCC-----cCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcC--CCCcEE
Q 002909 574 KPIIFSMARLDT-----VKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQ--LQGQFR 646 (867)
Q Consensus 574 k~iIl~vGRL~~-----~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~--L~~~V~ 646 (867)
.-++++.|.+.. .+-...++.++..+ +++.++++=..... .. +.+... ..++|.
T Consensus 278 ~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~----~~~~FiW~~~~~~~------------~~---~~~~~~~~~~~nV~ 338 (496)
T KOG1192|consen 278 SVVYISFGSMVNSADLPEEQKKELAKALESL----QGVTFLWKYRPDDS------------IY---FPEGLPNRGRGNVV 338 (496)
T ss_pred CeEEEECCcccccccCCHHHHHHHHHHHHhC----CCceEEEEecCCcc------------hh---hhhcCCCCCcCceE
Confidence 556777787753 34444555555544 46777766655331 00 222221 245788
Q ss_pred EcccccCCCChHHHHHHHHc-cCcEEEEcCCCCCCCHHHHHHHHcCCCEEecC----CCCccceee-cCceEEEeCC--C
Q 002909 647 WIAAQTDRYRNGELYRCIAD-TKGAFVQPALYEAFGLTVIEAMNCGLPTFATN----QGGPAEIII-DGVSGFHIDP--N 718 (867)
Q Consensus 647 flG~~~d~v~~~el~~~la~-~aDvfV~PS~~EgfGltvlEAMa~GlPVIat~----~gG~~EiI~-dg~~G~lv~p--~ 718 (867)
..+|.+. .++. +.. +.++||. .-|++ +++||+.+|+|+|+.. ..-.+..+. +|..|....- .
T Consensus 339 ~~~W~PQ----~~ll--l~H~~v~~FvT---HgG~n-St~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~~~~~~ 408 (496)
T KOG1192|consen 339 LSKWAPQ----NDLL--LDHPAVGGFVT---HGGWN-STLESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLDKRDLV 408 (496)
T ss_pred EecCCCc----HHHh--cCCCcCcEEEE---CCccc-HHHHHHhcCCceecCCccccchhHHHHHHhCCCEEEEehhhcC
Confidence 8887654 3443 221 1334442 13444 4599999999999643 333444444 3444444321 1
Q ss_pred CHHHHHHHHHHHHHHhhcCHHHHHHH
Q 002909 719 NGDESSNKIADFFEKCKTDAGYWNQM 744 (867)
Q Consensus 719 d~e~lA~aI~~ll~~~~~dp~~~~~m 744 (867)
+.+ +.+++..++ .++++.+..
T Consensus 409 ~~~-~~~~~~~il----~~~~y~~~~ 429 (496)
T KOG1192|consen 409 SEE-LLEAIKEIL----ENEEYKEAA 429 (496)
T ss_pred cHH-HHHHHHHHH----cChHHHHHH
Confidence 223 666776666 677655443
No 211
>PRK06988 putative formyltransferase; Provisional
Probab=44.96 E-value=1.8e+02 Score=32.50 Aligned_cols=18 Identities=39% Similarity=0.495 Sum_probs=11.6
Q ss_pred HHHHHHHCCCceeeccEEEec
Q 002909 321 LLLRIKQQGLSVKPQILVVTR 341 (867)
Q Consensus 321 La~~L~~~GheV~~~V~VvT~ 341 (867)
..+.|.+.|++|. .|+|.
T Consensus 17 ~L~~L~~~~~~i~---~Vvt~ 34 (312)
T PRK06988 17 CLQVLLARGVDVA---LVVTH 34 (312)
T ss_pred HHHHHHhCCCCEE---EEEcC
Confidence 3346777899876 35554
No 212
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=44.25 E-value=2.1e+02 Score=30.90 Aligned_cols=33 Identities=21% Similarity=0.226 Sum_probs=21.5
Q ss_pred CCCeEEE-ECCCCh---HHHHHHHHHhcCCcEEEEEc
Q 002909 408 GKPDLII-GNYSDG---NLVASLMASKLGITQATIAH 440 (867)
Q Consensus 408 ~kPDIIh-~h~~~~---~l~a~lla~~~gip~V~t~H 440 (867)
.++++|+ ..++.+ .--+.-.|+.+++|++-...
T Consensus 64 ~~i~~VIDATHPfA~~is~~a~~ac~~~~ipyiR~eR 100 (248)
T PRK08057 64 EGIDLVIDATHPYAAQISANAAAACRALGIPYLRLER 100 (248)
T ss_pred CCCCEEEECCCccHHHHHHHHHHHHHHhCCcEEEEeC
Confidence 4888888 333333 33466678899999985544
No 213
>PF10649 DUF2478: Protein of unknown function (DUF2478); InterPro: IPR018912 This is a family of hypothetical bacterial proteins encoded in the vicinity of molybdenum ABC transporter gene-products MobA, MobB and MobC. However the function could not be confirmed.
Probab=44.07 E-value=41 Score=33.75 Aligned_cols=41 Identities=22% Similarity=0.421 Sum_probs=31.2
Q ss_pred HHHHHHHccCcEEEEcCC----CCCCCH--HHHHHHHcCCCEEecCC
Q 002909 659 ELYRCIADTKGAFVQPAL----YEAFGL--TVIEAMNCGLPTFATNQ 699 (867)
Q Consensus 659 el~~~la~~aDvfV~PS~----~EgfGl--tvlEAMa~GlPVIat~~ 699 (867)
.+.+.+.+.+|++|..-+ .||-|+ .+.+|++.|+||+++-.
T Consensus 85 ~l~~al~~~~DLlivNkFGk~Ea~G~Glr~~i~~A~~~giPVLt~V~ 131 (159)
T PF10649_consen 85 ALRRALAEGADLLIVNKFGKQEAEGRGLRDEIAAALAAGIPVLTAVP 131 (159)
T ss_pred HHHHHHhcCCCEEEEcccHHhhhcCCCHHHHHHHHHHCCCCEEEEEC
Confidence 456667777999998755 455565 58999999999998743
No 214
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]
Probab=43.19 E-value=43 Score=37.93 Aligned_cols=105 Identities=20% Similarity=0.154 Sum_probs=52.6
Q ss_pred cccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCCCC-CCCCCCCCc-----cccccCCCCeEEEEccCCCccc
Q 002909 303 TGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLIPN-SKGTKCSQE-----LEPIYDTKHSHILRIPFKTEQA 376 (867)
Q Consensus 303 tGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~~~-~~g~~~~~~-----~e~i~~~~~v~I~rvp~~~~~~ 376 (867)
+||+-..|. |.-|++|||+|. =++-..-+ ..+..|... .+.+...=|+.+..+.|
T Consensus 11 SGGVDSSVa----------A~lLk~QGyeVi----Gl~m~~~~~~~~~~C~s~~d~~da~~va~~LGIp~~~vdf----- 71 (356)
T COG0482 11 SGGVDSSVA----------AYLLKEQGYEVI----GLFMKNWDEDGGGGCCSEEDLRDAERVADQLGIPLYVVDF----- 71 (356)
T ss_pred cCCHHHHHH----------HHHHHHcCCeEE----EEEEEeeccCCCCcCCchhHHHHHHHHHHHhCCceEEEch-----
Confidence 688865554 346889999998 66554322 122223322 22222222333333333
Q ss_pred ccccccccccchhhHHHHHHHHHHHHHHHc----CCCCeEEEECCCChHHHHHHHHHhcCCcEEEEEcC
Q 002909 377 ILPQWVSRFDIYPYLGRFAQDATAKILDLM----EGKPDLIIGNYSDGNLVASLMASKLGITQATIAHA 441 (867)
Q Consensus 377 ~l~~~isr~~i~p~l~~f~~~~~~~i~~~l----~~kPDIIh~h~~~~~l~a~lla~~~gip~V~t~H~ 441 (867)
.+.|...+...+.... ...|| |.||...---...-.+..+|.-.+.|-|-
T Consensus 72 --------------~~~y~~~V~~~f~~~Y~~G~TPNPc-i~CN~~iKF~~~l~~a~~lgad~iATGHY 125 (356)
T COG0482 72 --------------EKEFWNKVFEYFLAEYKAGKTPNPC-ILCNKEIKFKALLDYAKELGADYIATGHY 125 (356)
T ss_pred --------------HHHHHHHHHHHHHHHHhCCCCCCcc-hhcCHHHHHHHHHHHHHHcCCCeEEEeee
Confidence 3344444444343333 24577 45654322122233345589899999884
No 215
>PRK10840 transcriptional regulator RcsB; Provisional
Probab=42.94 E-value=3.1e+02 Score=28.03 Aligned_cols=110 Identities=9% Similarity=0.142 Sum_probs=65.4
Q ss_pred CeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccccCCCChHHHHHHHHc-cCcEEEEcCCCCC----
Q 002909 605 MVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTDRYRNGELYRCIAD-TKGAFVQPALYEA---- 679 (867)
Q Consensus 605 ~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d~v~~~el~~~la~-~aDvfV~PS~~Eg---- 679 (867)
+++++|+.+.+. ....+....+.. +.+..++... +..+....+.. ..|++++-....+
T Consensus 3 ~~~Ilivdd~~~-----------~~~~l~~~L~~~---~~~~~v~~~~---~~~~~~~~~~~~~~DlvllD~~l~~~~~~ 65 (216)
T PRK10840 3 NMNVIIADDHPI-----------VLFGIRKSLEQI---EWVNVVGEFE---DSTALINNLPKLDAHVLITDLSMPGDKYG 65 (216)
T ss_pred ceEEEEECCcHH-----------HHHHHHHHHhcC---CCCEEEEEEC---CHHHHHHHHHhCCCCEEEEeCcCCCCCCC
Confidence 357777776643 234455555443 2333333211 23455555432 3688877543332
Q ss_pred CCHHHHHHHH---cCCCEEec-CCCCc---cceeecCceEEEeCCCCHHHHHHHHHHHH
Q 002909 680 FGLTVIEAMN---CGLPTFAT-NQGGP---AEIIIDGVSGFHIDPNNGDESSNKIADFF 731 (867)
Q Consensus 680 fGltvlEAMa---~GlPVIat-~~gG~---~EiI~dg~~G~lv~p~d~e~lA~aI~~ll 731 (867)
.|+.+++.+. .++|+|+- ..... .+.+..|..||+..|.+++++.++|..+.
T Consensus 66 ~g~~~~~~l~~~~~~~~iIvls~~~~~~~~~~a~~~Ga~~yl~K~~~~~~l~~ai~~v~ 124 (216)
T PRK10840 66 DGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQ 124 (216)
T ss_pred CHHHHHHHHHHHCCCCcEEEEEecCCHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHHH
Confidence 5777777764 34677664 33322 23456789999999999999999998776
No 216
>PRK13933 stationary phase survival protein SurE; Provisional
Probab=42.23 E-value=2.8e+02 Score=30.11 Aligned_cols=35 Identities=11% Similarity=0.273 Sum_probs=22.6
Q ss_pred cCCCCeEEEEC--C---------CChHHHHHHHHHhcCCcEEEEEc
Q 002909 406 MEGKPDLIIGN--Y---------SDGNLVASLMASKLGITQATIAH 440 (867)
Q Consensus 406 l~~kPDIIh~h--~---------~~~~l~a~lla~~~gip~V~t~H 440 (867)
+..+||+|++- . +.+...|.+-+...|+|-+-...
T Consensus 84 ~~~~pDLVvSGIN~G~N~g~dv~ySGTVgAA~ea~~~GiPsiA~S~ 129 (253)
T PRK13933 84 VPDNIDMVISGINKGLNIGNDILYSGTVSAAIEGAIYKVPSIAVSA 129 (253)
T ss_pred cCCCCCEEEECCcCCCCCCcCCccchhHHHHHHHHHcCCCeEEEEe
Confidence 35689999952 1 12334566667788999885543
No 217
>PF05686 Glyco_transf_90: Glycosyl transferase family 90; InterPro: IPR006598 Cryptococcus neoformans is a pathogenic fungus which most commonly affects the central nervous system and causes fatal meningoencephalitis primarily in patients with AIDS. This fungus produces a thick extracellular polysaccharide capsule which is well recognised as a virulence factor. CAP10 is required for capsule formation and virulence [].
Probab=42.02 E-value=65 Score=37.18 Aligned_cols=73 Identities=8% Similarity=-0.001 Sum_probs=44.0
Q ss_pred HHHcCCCEEecCC---CCccceeecCceEEEeCC-CCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHH
Q 002909 687 AMNCGLPTFATNQ---GGPAEIIIDGVSGFHIDP-NNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYA 762 (867)
Q Consensus 687 AMa~GlPVIat~~---gG~~EiI~dg~~G~lv~p-~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a 762 (867)
-|+||-.|+.... .-..+.+.++++=+-+.. +|..++.++|..+. +|++..++|+++|.+.+.+..+.+.+.
T Consensus 233 lL~c~SvVl~~~~~~~e~f~~~L~P~vHYVPV~~~~d~sdL~~~v~w~~----~~~~~A~~IA~~g~~f~~~~L~~~~~~ 308 (395)
T PF05686_consen 233 LLACNSVVLKVKSPYYEFFYRALKPWVHYVPVKRDDDLSDLEEKVEWLN----AHDDEAQRIAENGQRFAREYLTMEDVY 308 (395)
T ss_pred HHcCCceEEEeCCcHHHHHHhhhcccccEEEeccccchhhHHHHhhhcc----cChHHHHHHHHHHHHHHHHHhhhhHHH
Confidence 3555555554321 112223334444444544 36677888776554 899999999999998876665555443
Q ss_pred H
Q 002909 763 N 763 (867)
Q Consensus 763 ~ 763 (867)
.
T Consensus 309 ~ 309 (395)
T PF05686_consen 309 C 309 (395)
T ss_pred H
Confidence 3
No 218
>smart00672 CAP10 Putative lipopolysaccharide-modifying enzyme.
Probab=38.76 E-value=1.6e+02 Score=31.90 Aligned_cols=47 Identities=9% Similarity=-0.003 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhHH
Q 002909 722 ESSNKIADFFEKCKTDAGYWNQMSAAGRQRIYECYTWKIYANKVLNMGSIY 772 (867)
Q Consensus 722 ~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v~~~ysw~~~a~~ll~ly~~~ 772 (867)
++.++|..+. .+++..++|+++|++.+.+..+.+.+..-+..+...|
T Consensus 203 ~l~~~i~~~~----~~~~~a~~Ia~~~~~~~~~~L~~~~~~~Y~~~ll~ey 249 (256)
T smart00672 203 ELKEAVDWGN----EHDKKAQEIGKRGSEFIQQNLSMEDVYDYMFHLLQEY 249 (256)
T ss_pred hHHHHHHHHH----hCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 4888886665 8999999999999999988888877766666554433
No 219
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=37.61 E-value=2.4e+02 Score=33.37 Aligned_cols=96 Identities=8% Similarity=0.023 Sum_probs=56.0
Q ss_pred HHHHHHHHccCcEEEEcCCCCCCCHHHHHHHHcC-CCEEecCC--CCccceeecCceEEEeCCCCHHHHHHHHHHHHHHh
Q 002909 658 GELYRCIADTKGAFVQPALYEAFGLTVIEAMNCG-LPTFATNQ--GGPAEIIIDGVSGFHIDPNNGDESSNKIADFFEKC 734 (867)
Q Consensus 658 ~el~~~la~~aDvfV~PS~~EgfGltvlEAMa~G-lPVIat~~--gG~~EiI~dg~~G~lv~p~d~e~lA~aI~~ll~~~ 734 (867)
....+.+++ +-..++|+-.+...-.+.||+.+| .|||.++. ....+++.-..-++.++ .+++-+.|.+.|..
T Consensus 335 ~~y~~~m~~-S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~~~lpf~~~~d~~~fSV~v~---~~~v~~~~~~iL~~- 409 (464)
T KOG1021|consen 335 LNYMEGMQD-SKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDGIQLPFGDVLDWTEFSVFVP---EKDVPELIKNILLS- 409 (464)
T ss_pred chHHHHhhc-CeEEECCCCCCcccHhHHHHHHhCCccEEEcCCcccCcCCCccceEEEEEEE---HHHhhhHHHHHHHh-
Confidence 345666666 878899999888888999999999 58998875 33344443333455554 33333334554421
Q ss_pred hcCHHHHHHHHHHHHHHHHHhCCHH
Q 002909 735 KTDAGYWNQMSAAGRQRIYECYTWK 759 (867)
Q Consensus 735 ~~dp~~~~~m~~~ar~~v~~~ysw~ 759 (867)
.......+|.++-...+...|.|.
T Consensus 410 -i~~~~~~~m~~~v~~~v~r~~~~~ 433 (464)
T KOG1021|consen 410 -IPEEEVLRMRENVIRLVPRHFLKK 433 (464)
T ss_pred -cCHHHHHHHHHHHHHHHHhhEEeC
Confidence 122233444444443344444443
No 220
>cd07944 DRE_TIM_HOA_like 4-hydroxy-2-oxovalerate aldolase-like, N-terminal catalytic TIM barrel domain. This family of bacterial enzymes is sequence-similar to 4-hydroxy-2-oxovalerate aldolase (HOA) but its exact function is unknown. This family includes the Bacteroides vulgatus Bvu_2661 protein and belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues t
Probab=36.44 E-value=5.9e+02 Score=27.61 Aligned_cols=154 Identities=12% Similarity=0.046 Sum_probs=82.4
Q ss_pred CcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccccCCCChHHHHHHH
Q 002909 585 TVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTDRYRNGELYRCI 664 (867)
Q Consensus 585 ~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d~v~~~el~~~l 664 (867)
+.+.++.+.+++...++..-.+.+-+.-... .+ .++..++-+.+.+.|. +.|.+... .+.....++++++
T Consensus 104 ~~~~~~~~~~~i~~ak~~G~~v~~~~~~a~~-----~~---~~~~~~~~~~~~~~g~-~~i~l~DT-~G~~~P~~v~~lv 173 (266)
T cd07944 104 HKHEFDEALPLIKAIKEKGYEVFFNLMAISG-----YS---DEELLELLELVNEIKP-DVFYIVDS-FGSMYPEDIKRII 173 (266)
T ss_pred ccccHHHHHHHHHHHHHCCCeEEEEEEeecC-----CC---HHHHHHHHHHHHhCCC-CEEEEecC-CCCCCHHHHHHHH
Confidence 4467888888888887765444433333221 11 1334445555566664 45655432 2223344554444
Q ss_pred ---HccCc--EEEEcCCCCCCCHH---HHHHHHcCCCEEecCCCCccceeecCceEEEeCCCCHHHHHHHHHHHHHHhhc
Q 002909 665 ---ADTKG--AFVQPALYEAFGLT---VIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDPNNGDESSNKIADFFEKCKT 736 (867)
Q Consensus 665 ---a~~aD--vfV~PS~~EgfGlt---vlEAMa~GlPVIat~~gG~~EiI~dg~~G~lv~p~d~e~lA~aI~~ll~~~~~ 736 (867)
....+ +-+.-.....+|+. .++|+.+|.=.|-+..+|+.+- +| .-..++++..+...+. ..-
T Consensus 174 ~~l~~~~~~~~~i~~H~Hn~~Gla~AN~laA~~aGa~~vd~s~~G~G~~-----aG----N~~~E~~v~~l~~~~~-~~~ 243 (266)
T cd07944 174 SLLRSNLDKDIKLGFHAHNNLQLALANTLEAIELGVEIIDATVYGMGRG-----AG----NLPTELLLDYLNNKFG-KKY 243 (266)
T ss_pred HHHHHhcCCCceEEEEeCCCccHHHHHHHHHHHcCCCEEEEecccCCCC-----cC----cHHHHHHHHHHHHhhc-cCC
Confidence 33223 33333335667775 5899999999999999998772 12 1134556665554421 112
Q ss_pred CHHHHHHHHHHHHHHHHHhCCH
Q 002909 737 DAGYWNQMSAAGRQRIYECYTW 758 (867)
Q Consensus 737 dp~~~~~m~~~ar~~v~~~ysw 758 (867)
|.+....+++.-.+.+.++|.|
T Consensus 244 dl~~l~~~~~~~~~~~~~~~~w 265 (266)
T cd07944 244 NLEPVLELIDEYIAPLKKKYEW 265 (266)
T ss_pred CHHHHHHHHHHHHHHHHhccCC
Confidence 4444444554445555555555
No 221
>PRK13935 stationary phase survival protein SurE; Provisional
Probab=36.28 E-value=3.4e+02 Score=29.46 Aligned_cols=34 Identities=26% Similarity=0.481 Sum_probs=22.3
Q ss_pred CCCCeEEEE--CC---------CChHHHHHHHHHhcCCcEEEEEc
Q 002909 407 EGKPDLIIG--NY---------SDGNLVASLMASKLGITQATIAH 440 (867)
Q Consensus 407 ~~kPDIIh~--h~---------~~~~l~a~lla~~~gip~V~t~H 440 (867)
..+||+|++ |. ..+...|..-+...|+|-+-...
T Consensus 84 ~~~pDLVvSGIN~G~N~g~~v~ySGTVgAA~ea~~~GiPaiA~S~ 128 (253)
T PRK13935 84 DKKVDLVISGINRGPNLGTDVLYSGTVSGALEGAMMGVPSIAISS 128 (253)
T ss_pred cCCCCEEEeCCccCCCCCcCCcccHhHHHHHHHHhcCCCeEEEEc
Confidence 468999994 21 12334566667788999986654
No 222
>PRK00676 hemA glutamyl-tRNA reductase; Validated
Probab=35.56 E-value=7e+02 Score=28.26 Aligned_cols=125 Identities=7% Similarity=-0.041 Sum_probs=67.1
Q ss_pred CCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccccCCCChHHHH----HHHHccCcEEEEcC--CC
Q 002909 604 NMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTDRYRNGELY----RCIADTKGAFVQPA--LY 677 (867)
Q Consensus 604 ~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d~v~~~el~----~~la~~aDvfV~PS--~~ 677 (867)
.+.+++++|.|.- -+...+...+.|. .+|.+........+.++++ .+... +|+.+..| ..
T Consensus 173 ~~k~vLvIGaGem------------~~l~a~~L~~~g~-~~i~v~nRt~~~~~~~~~~~~~~~~~~~-~DvVIs~t~~Ta 238 (338)
T PRK00676 173 KKASLLFIGYSEI------------NRKVAYYLQRQGY-SRITFCSRQQLTLPYRTVVREELSFQDP-YDVIFFGSSESA 238 (338)
T ss_pred cCCEEEEEcccHH------------HHHHHHHHHHcCC-CEEEEEcCCccccchhhhhhhhhhcccC-CCEEEEcCCcCC
Confidence 4578999999832 2333333334454 5688777554445555554 55555 89999753 22
Q ss_pred CCCCHHHHHHHHcCCCEEecCCCCccceee--cCceEEEeCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHH
Q 002909 678 EAFGLTVIEAMNCGLPTFATNQGGPAEIII--DGVSGFHIDPNNGDESSNKIADFFEKCKTDAGYWNQMSAAGRQRI 752 (867)
Q Consensus 678 EgfGltvlEAMa~GlPVIat~~gG~~EiI~--dg~~G~lv~p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ar~~v 752 (867)
-+.+....|.+..-.+-+.-|.+-|+++=. ...+-.++ |.|++.+.+. .|-..|++....+...+
T Consensus 239 s~~p~i~~~~~~~~~~r~~iDLAvPRdId~v~~~~~v~Ly---~iDdL~~i~~-------~n~~~R~~~~~~ae~iI 305 (338)
T PRK00676 239 YAFPHLSWESLADIPDRIVFDFNVPRTFPWSETPFPHRYL---DMDFISEWVQ-------KHLQCRKEVNNKHKLSL 305 (338)
T ss_pred CCCceeeHHHHhhccCcEEEEecCCCCCccccccCCcEEE---EhHHHHHHHH-------HHHHHHHHHHHHHHHHH
Confidence 234444455444322246667777776631 12223344 5666666553 33444555555554444
No 223
>COG0496 SurE Predicted acid phosphatase [General function prediction only]
Probab=35.48 E-value=2.1e+02 Score=30.97 Aligned_cols=33 Identities=39% Similarity=0.697 Sum_probs=23.1
Q ss_pred CCCeEEEEC------------CCChHHHHHHHHHhcCCcEEEEEcC
Q 002909 408 GKPDLIIGN------------YSDGNLVASLMASKLGITQATIAHA 441 (867)
Q Consensus 408 ~kPDIIh~h------------~~~~~l~a~lla~~~gip~V~t~H~ 441 (867)
..||+|.+- |+ +...|.+=+..+|+|-+...+.
T Consensus 82 ~~pDLVvSGIN~G~Nlg~dv~yS-GTVaaA~Ea~~~GipsIA~S~~ 126 (252)
T COG0496 82 PRPDLVVSGINAGANLGDDVIYS-GTVAAAMEAALLGIPAIAISLA 126 (252)
T ss_pred CCCCEEEeCccCCCccccceeee-ehHHHHHHHHHcCccceeeeeh
Confidence 359999952 22 4455666678899999877665
No 224
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=34.83 E-value=5.2e+02 Score=27.68 Aligned_cols=33 Identities=12% Similarity=0.079 Sum_probs=20.2
Q ss_pred CCCeEEEEC--CCChHHHHHHHHHhcCCcEEEEEc
Q 002909 408 GKPDLIIGN--YSDGNLVASLMASKLGITQATIAH 440 (867)
Q Consensus 408 ~kPDIIh~h--~~~~~l~a~lla~~~gip~V~t~H 440 (867)
..+|.|... ...+.-+.-.+-+.+|+|++..-.
T Consensus 180 ~~aDAifisCTnLrt~~vi~~lE~~lGkPVlsSNq 214 (239)
T TIGR02990 180 PDADALFLSCTALRAATCAQRIEQAIGKPVVTSNQ 214 (239)
T ss_pred CCCCEEEEeCCCchhHHHHHHHHHHHCCCEEEHHH
Confidence 467877643 233334455566779999985544
No 225
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=34.47 E-value=4.4e+02 Score=28.74 Aligned_cols=111 Identities=17% Similarity=0.115 Sum_probs=67.4
Q ss_pred EEEEeccCCcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCC---CChHHHHHHHHHHHHHHHcCCCCcEEEcccccC
Q 002909 577 IFSMARLDTVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKS---HDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTD 653 (867)
Q Consensus 577 Il~vGRL~~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~---~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d 653 (867)
++.++......+.+.+++...++++.. ++++..|...+ --+ ...-..+..+.+++..+++|++=-..+. +
T Consensus 28 ~~~iaGPCsie~~~~~~~~A~~lk~~g--~~~~r~~~~kp-RTs~~s~~G~g~~gl~~l~~~~~~~Gl~~~te~~----d 100 (266)
T PRK13398 28 KIIIAGPCAVESEEQMVKVAEKLKELG--VHMLRGGAFKP-RTSPYSFQGLGEEGLKILKEVGDKYNLPVVTEVM----D 100 (266)
T ss_pred EEEEEeCCcCCCHHHHHHHHHHHHHcC--CCEEEEeeecC-CCCCCccCCcHHHHHHHHHHHHHHcCCCEEEeeC----C
Confidence 445555566678899999999998853 56677764321 111 1111245567788888999885222222 2
Q ss_pred CCChHHHHHHHHccCcEEEEcCC-CCCCCHHHHHHHHcCCCEEecCC
Q 002909 654 RYRNGELYRCIADTKGAFVQPAL-YEAFGLTVIEAMNCGLPTFATNQ 699 (867)
Q Consensus 654 ~v~~~el~~~la~~aDvfV~PS~-~EgfGltvlEAMa~GlPVIat~~ 699 (867)
. +-..++.+.+|++-.+|+ .+.+.+ +-++-..|+||+.++-
T Consensus 101 ~----~~~~~l~~~vd~~kIga~~~~n~~L-L~~~a~~gkPV~lk~G 142 (266)
T PRK13398 101 T----RDVEEVADYADMLQIGSRNMQNFEL-LKEVGKTKKPILLKRG 142 (266)
T ss_pred h----hhHHHHHHhCCEEEECcccccCHHH-HHHHhcCCCcEEEeCC
Confidence 2 233444445789988987 444443 4455567999998753
No 226
>PF03308 ArgK: ArgK protein; InterPro: IPR005129 Bacterial periplasmic transport systems require the function of a specific substrate-binding protein, located in the periplasm, and several cytoplasmic membrane transport components. In Escherichia coli, the arginine-ornithine transport system requires an arginine-ornithine-binding protein and the lysine-arginine-ornithine (LAO) transport system includes a LAO-binding protein. Both periplasmic proteins can be phosphorylated by a single kinase, ArgK [] resulting in reduced levels of transport activity of the periplasmic transport systems that include each of the binding proteins. The ArgK protein acts as an ATPase enzyme and as a kinase.; PDB: 3MD0_A 3P32_A 2QM7_A 2QM8_A 2WWW_D 2P67_A 3NXS_A.
Probab=34.07 E-value=5.4e+02 Score=28.11 Aligned_cols=102 Identities=15% Similarity=0.119 Sum_probs=52.1
Q ss_pred HHHHHHHHCCCceeeccEEEecCC--CCCCCCCCCCcc--ccccCCCCeEEEEccCCCcccccccccccccchhhHHHHH
Q 002909 320 ELLLRIKQQGLSVKPQILVVTRLI--PNSKGTKCSQEL--EPIYDTKHSHILRIPFKTEQAILPQWVSRFDIYPYLGRFA 395 (867)
Q Consensus 320 eLa~~L~~~GheV~~~V~VvT~~~--~~~~g~~~~~~~--e~i~~~~~v~I~rvp~~~~~~~l~~~isr~~i~p~l~~f~ 395 (867)
.|.+.+.++|+.|- |++-++ |-..|....++. ......+++-|-.++.+..-| -+..-.
T Consensus 48 ~l~~~~~~~g~~Va----VlAVDPSSp~tGGAlLGDRiRM~~~~~d~~vfIRS~atRG~lG-------------Gls~~t 110 (266)
T PF03308_consen 48 ALIRELRERGKRVA----VLAVDPSSPFTGGALLGDRIRMQELSRDPGVFIRSMATRGSLG-------------GLSRAT 110 (266)
T ss_dssp HHHHHHHHTT--EE----EEEE-GGGGCC---SS--GGGCHHHHTSTTEEEEEE---SSHH-------------HHHHHH
T ss_pred HHHHHHhhcCCceE----EEEECCCCCCCCCcccccHHHhcCcCCCCCEEEeecCcCCCCC-------------CccHhH
Confidence 67778888999999 666443 334566566554 334556788888888776433 122233
Q ss_pred HHHHHHHHHHcCCCCeEEEECCCChHHHHHHHHHhcCCcEEEEEcC
Q 002909 396 QDATAKILDLMEGKPDLIIGNYSDGNLVASLMASKLGITQATIAHA 441 (867)
Q Consensus 396 ~~~~~~i~~~l~~kPDIIh~h~~~~~l~a~lla~~~gip~V~t~H~ 441 (867)
.++...+.. ..+|+|+......+..-.-++..-.+.+++..-+
T Consensus 111 ~~~v~ll~a---aG~D~IiiETVGvGQsE~~I~~~aD~~v~v~~Pg 153 (266)
T PF03308_consen 111 RDAVRLLDA---AGFDVIIIETVGVGQSEVDIADMADTVVLVLVPG 153 (266)
T ss_dssp HHHHHHHHH---TT-SEEEEEEESSSTHHHHHHTTSSEEEEEEESS
T ss_pred HHHHHHHHH---cCCCEEEEeCCCCCccHHHHHHhcCeEEEEecCC
Confidence 344444444 3799999876544444444455555555544433
No 227
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=33.94 E-value=2.8e+02 Score=29.94 Aligned_cols=35 Identities=14% Similarity=0.178 Sum_probs=23.0
Q ss_pred CcEEEEcCC-CCCCCHHHHHHHHcCCCEEecCCCCc
Q 002909 668 KGAFVQPAL-YEAFGLTVIEAMNCGLPTFATNQGGP 702 (867)
Q Consensus 668 aDvfV~PS~-~EgfGltvlEAMa~GlPVIat~~gG~ 702 (867)
+|++|.=-. ..|+--++-=|..+|+|||.-.-.-.
T Consensus 195 i~~lVtK~SG~~g~~eKi~AA~~lgi~vivI~RP~~ 230 (249)
T PF02571_consen 195 IDVLVTKESGGSGFDEKIEAARELGIPVIVIKRPPE 230 (249)
T ss_pred CCEEEEcCCCchhhHHHHHHHHHcCCeEEEEeCCCC
Confidence 566665322 22566678888899999988765443
No 228
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=32.00 E-value=2e+02 Score=30.38 Aligned_cols=34 Identities=24% Similarity=0.365 Sum_probs=21.8
Q ss_pred CCCeEEEECCC--ChHHHHHHHHHh-cCCcEEE-EEcC
Q 002909 408 GKPDLIIGNYS--DGNLVASLMASK-LGITQAT-IAHA 441 (867)
Q Consensus 408 ~kPDIIh~h~~--~~~l~a~lla~~-~gip~V~-t~H~ 441 (867)
.+.|++..-.. ..|.++..++.+ +|+|.++ .+++
T Consensus 65 ~~aD~vva~t~~d~~N~i~~~la~~~~gv~~viar~~~ 102 (225)
T COG0569 65 DDADAVVAATGNDEVNSVLALLALKEFGVPRVIARARN 102 (225)
T ss_pred CcCCEEEEeeCCCHHHHHHHHHHHHhcCCCcEEEEecC
Confidence 47898886543 346666666655 8998753 4554
No 229
>PF03668 ATP_bind_2: P-loop ATPase protein family; InterPro: IPR005337 This entry represents UPF0042 nucleotide-binding proteins. This is a family of putative P-loop ATPases [], as they contain an ATP-binding site and display ATPase and GTPase activities.; GO: 0005524 ATP binding
Probab=31.80 E-value=1.3e+02 Score=33.03 Aligned_cols=63 Identities=24% Similarity=0.277 Sum_probs=39.5
Q ss_pred HHHHHHHHHhhcCCChhhHHHHHhcCCCcceEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCc
Q 002909 252 RETMRLFSEALQAPDAAKLQVLFSRLPNMFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLS 331 (867)
Q Consensus 252 ~~~~~~~~~~~~~p~~~~l~~f~~r~pm~~rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~Ghe 331 (867)
.|.+..+.++++. .+..|...--.-+.|+|=| |||+-+.|. +.++|+++|.+.|+.
T Consensus 218 ~~f~~~~~~~l~~----~lp~y~~egk~~ltIaiGC---------------TGG~HRSV~-----iae~La~~L~~~~~~ 273 (284)
T PF03668_consen 218 QEFLEKIEDLLDF----LLPRYEKEGKSYLTIAIGC---------------TGGQHRSVA-----IAERLAERLREKGYT 273 (284)
T ss_pred HHHHHHHHHHHHH----HHHHHHhcCCceEEEEEEc---------------CCCcCcHHH-----HHHHHHHHHHhcCCc
Confidence 3444444444432 3444444333345676665 899988775 555888899999998
Q ss_pred eeeccEEEecC
Q 002909 332 VKPQILVVTRL 342 (867)
Q Consensus 332 V~~~V~VvT~~ 342 (867)
|. |.-|.
T Consensus 274 v~----v~HRd 280 (284)
T PF03668_consen 274 VV----VRHRD 280 (284)
T ss_pred ce----EEcCC
Confidence 88 66654
No 230
>PF00551 Formyl_trans_N: Formyl transferase; InterPro: IPR002376 A number of formyl transferases belong to this group. Methionyl-tRNA formyltransferase transfers a formyl group onto the amino terminus of the acyl moiety of the methionyl aminoacyl-tRNA. The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and by impairing its binding to EFTU-GTP. Formyltetrahydrofolate dehydrogenase produces formate from formyl- tetrahydrofolate. This is the N-terminal domain of these enzymes and is found upstream of the C-terminal domain (IPR005793 from INTERPRO). The trifunctional glycinamide ribonucleotide synthetase-aminoimidazole ribonucleotide synthetase-glycinamide ribonucleotide transformylase catalyses the second, third and fifth steps in de novo purine biosynthesis. The glycinamide ribonucleotide transformylase belongs to this group.; GO: 0016742 hydroxymethyl-, formyl- and related transferase activity, 0009058 biosynthetic process; PDB: 3P9X_B 3OBI_A 3R8X_A 3KCQ_C 3RFO_D 3AV3_A 3N0V_D 3LOU_A 3O1L_A 4DS3_A ....
Probab=30.99 E-value=5.3e+02 Score=26.00 Aligned_cols=42 Identities=19% Similarity=0.131 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHcCCCCeEEEECCCChHHHHHHHHHhcCCcEEEEEcC
Q 002909 395 AQDATAKILDLMEGKPDLIIGNYSDGNLVASLMASKLGITQATIAHA 441 (867)
Q Consensus 395 ~~~~~~~i~~~l~~kPDIIh~h~~~~~l~a~lla~~~gip~V~t~H~ 441 (867)
...+...+... +||++.+-.+.--+-..++ ...+...+ .+|.
T Consensus 68 ~~~~~~~l~~~---~~Dl~v~~~~~~il~~~~l-~~~~~~~i-NiHp 109 (181)
T PF00551_consen 68 DEELLELLESL---NPDLIVVAGYGRILPKEFL-SIPPYGII-NIHP 109 (181)
T ss_dssp HHHHHHHHHHT---T-SEEEESS-SS---HHHH-HHSTTSEE-EEES
T ss_pred hhHHHHHHHhh---ccceeehhhhHHHhhhhhh-hcccccEE-EEee
Confidence 33444445443 8999987755432333333 44444444 4554
No 231
>PRK00346 surE 5'(3')-nucleotidase/polyphosphatase; Provisional
Probab=29.04 E-value=6.4e+02 Score=27.26 Aligned_cols=34 Identities=29% Similarity=0.558 Sum_probs=22.5
Q ss_pred CCCCeEEEE--CC---------CChHHHHHHHHHhcCCcEEEEEc
Q 002909 407 EGKPDLIIG--NY---------SDGNLVASLMASKLGITQATIAH 440 (867)
Q Consensus 407 ~~kPDIIh~--h~---------~~~~l~a~lla~~~gip~V~t~H 440 (867)
..+||+|++ |. ..+...|.+-+...|+|-+-...
T Consensus 80 ~~~pDlVvSGIN~G~N~g~~v~ySGTVgAA~ea~~~GiPaiA~S~ 124 (250)
T PRK00346 80 DPKPDLVVSGINHGANLGDDVLYSGTVAAAMEGALLGIPAIAVSL 124 (250)
T ss_pred cCCCCEEEeCCccCCCCCCCeeccHHHHHHHHHHhcCCCeEEEec
Confidence 458999994 21 12334566667788999986654
No 232
>PF08672 APC2: Anaphase promoting complex (APC) subunit 2; InterPro: IPR014786 The anaphase-promoting complex (APC) or cyclosome is a multi-subunit E3 protein ubiquitin ligase that regulates important events in mitosis such as the initiation of anaphase and exit from telophase. The APC, in conjunction with other enzymes, assembles multi-ubiquitin chains on a variety of regulatory proteins, thereby targeting them for proteolysis by the 26S proteasome. Anaphase is initiated when the APC triggers the destruction of securin, thereby allowing the protease, separase, to disrupt sister-chromatid cohesion. Securin ubiquitination by the APC is inhibited by cyclin-dependent kinase 1 (Cdk1)-dependent phosphorylation []. Forkhead Box M1 (FoxM1), which is a transcription factor that is over-expressed in many cancers, is degraded in late mitosis and early G1 phase by the APC/cyclosome (APC/C) E3 ubiquitin ligase []. The APC/C targets mitotic cyclins for destruction in mitosis and G1 phase and is then inactivated at S phase. It thereby generates alternating states of high and low cyclin-Cdk activity, which is required for the alternation of mitosis and DNA replication []. The APC/C is composed of at least 13 subunits that stay tightly associated throughout the cell cycle: APC1, APC2, APC4, APC5, APC9, APC11, CDC16, CDC23, CDC26, CDC27, DOC1, MND2 and SWM1[], []. In fission yeast the 13 subunits are known as: Apc1, Apc2, Nuc2, Apc4, Apc5, Cut9, Apc8, Apc10, Apc11, Hcn1, Apc13, Apc14 and Apc15 []. This entry represents a C-terminal domain found in APC subunit 2. ; PDB: 1LDD_A.
Probab=28.96 E-value=30 Score=28.89 Aligned_cols=35 Identities=23% Similarity=0.371 Sum_probs=25.5
Q ss_pred CccccchHhhH---HHHHHHcHHHHHHHHHHHHhcCCC
Q 002909 7 LKRSDTIADTM---PDALRQSRYYMKKCFSRFVAKGKR 41 (867)
Q Consensus 7 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 41 (867)
+.|+++|...+ +....-.-.+|.+||.+.++.|+=
T Consensus 14 l~RIh~mLkmf~~~~~~~~~s~~eL~~fL~~lv~e~~L 51 (60)
T PF08672_consen 14 LDRIHSMLKMFPKDPGGYDISLEELQEFLDRLVEEGKL 51 (60)
T ss_dssp HHHHHHHHHHH-GGG--TT--HHHHHHHHHHHHHTTSE
T ss_pred HHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHCCcE
Confidence 67889988887 344466778999999999998873
No 233
>PRK13931 stationary phase survival protein SurE; Provisional
Probab=28.38 E-value=5e+02 Score=28.24 Aligned_cols=33 Identities=21% Similarity=0.457 Sum_probs=21.7
Q ss_pred CCCeEEEE--CC---------CChHHHHHHHHHhcCCcEEEEEc
Q 002909 408 GKPDLIIG--NY---------SDGNLVASLMASKLGITQATIAH 440 (867)
Q Consensus 408 ~kPDIIh~--h~---------~~~~l~a~lla~~~gip~V~t~H 440 (867)
.+||+|++ |. +.+...|.+-+...|+|-+-...
T Consensus 86 ~~pDlVvSGIN~G~N~g~~v~ySGTVgAA~Ea~~~GiPsiA~S~ 129 (261)
T PRK13931 86 APPDLVLSGVNRGNNSAENVLYSGTVGGAMEAALQGLPAIALSQ 129 (261)
T ss_pred CCCCEEEECCccCCCCCcCcccchhHHHHHHHHhcCCCeEEEEe
Confidence 58999994 21 12334466667788999886654
No 234
>COG3171 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=28.25 E-value=52 Score=30.84 Aligned_cols=32 Identities=41% Similarity=0.787 Sum_probs=26.9
Q ss_pred HHhhcCCcccc----CCcHHHHHHHHHHHHHhhcCC
Q 002909 234 RFKEWGFEKGW----GNTAERVRETMRLFSEALQAP 265 (867)
Q Consensus 234 ~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~p 265 (867)
+||+|||..-| |..|+-|-|++....|-+.+|
T Consensus 25 EFQeLgF~v~~~~~eg~~ae~~dea~drFidevI~~ 60 (119)
T COG3171 25 EFQELGFSVQWSFHEGTSAEDVDEAVDRFIDEVIAP 60 (119)
T ss_pred HHHhhheeeEEEecCCccHHHHHHHHHHHHHHHHcc
Confidence 69999999999 778999999998887766553
No 235
>KOG0995 consensus Centromere-associated protein HEC1 [Cell cycle control, cell division, chromosome partitioning]
Probab=28.21 E-value=1.1e+02 Score=36.57 Aligned_cols=99 Identities=15% Similarity=0.156 Sum_probs=57.5
Q ss_pred hhhHHHHHHHHhcccCCceeeccCcCCCHHHHHHHHHHHHHHhccCCCCCChhHHHHHHhhcCCccccCCcHHHHHHHHH
Q 002909 177 EKAKQFLDYLLALNHRGEQLMINDTLDTVDKLQAALIAAEVSISDLPKDTPYQEFQQRFKEWGFEKGWGNTAERVRETMR 256 (867)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 256 (867)
++...+++||..|.|.|..=|=+-.-.|+.......+- ..+. +.|+.+-+ .|..|.+.
T Consensus 74 ~c~~~I~~fL~engf~~~iS~k~l~~PS~KdF~~iFkf---LY~~------------------Ldp~y~f~-~r~EeEV~ 131 (581)
T KOG0995|consen 74 QCIRQIYNFLVENGFSHPISIKLLMKPSVKDFIAIFKF---LYGF------------------LDPDYEFP-ERIEEEVV 131 (581)
T ss_pred HHHHHHHHHHHHcCCCCChhhhhcCCCccccHHHHHHH---HHhc------------------cCCCcccc-hhHHHHHH
Confidence 67889999999999995332222223333322222211 1122 23444444 67777777
Q ss_pred HHHHhhcCCChhhHHHHHhcCCCcceEEEEccCccCCcccccCCCCcccchhHhHHHHH
Q 002909 257 LFSEALQAPDAAKLQVLFSRLPNMFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVR 315 (867)
Q Consensus 257 ~~~~~~~~p~~~~l~~f~~r~pm~~rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~ar 315 (867)
...-.|-=|-+.+. . --+++.|||+|| ..=|+..++.|+++
T Consensus 132 ~ilK~L~YPf~~si-------S--s~~a~gspH~WP---------~iL~mlhWlvdlI~ 172 (581)
T KOG0995|consen 132 QILKNLKYPFLLSI-------S--SLQAAGSPHNWP---------HILGMLHWLVDLIR 172 (581)
T ss_pred HHHHhCCCCcccch-------h--hhccCCCCCccH---------HHHHHHHHHHHHHH
Confidence 66666666655444 2 126789999998 34566666665555
No 236
>PRK10360 DNA-binding transcriptional activator UhpA; Provisional
Probab=28.21 E-value=5.7e+02 Score=24.96 Aligned_cols=74 Identities=14% Similarity=0.148 Sum_probs=50.4
Q ss_pred HHHHHHHH-ccCcEEEEcCC-CCCCCHHHHHHHHcCCCEEecCCCCcc----ceeecCceEEEeCCCCHHHHHHHHHHHH
Q 002909 658 GELYRCIA-DTKGAFVQPAL-YEAFGLTVIEAMNCGLPTFATNQGGPA----EIIIDGVSGFHIDPNNGDESSNKIADFF 731 (867)
Q Consensus 658 ~el~~~la-~~aDvfV~PS~-~EgfGltvlEAMa~GlPVIat~~gG~~----EiI~dg~~G~lv~p~d~e~lA~aI~~ll 731 (867)
.+....+. ...|++++-.. .+.-|+.+++.+....|+|+....... +.+..|..|++..|.+.+++.++|..++
T Consensus 37 ~~~l~~~~~~~~dlvi~d~~~~~~~g~~~~~~l~~~~~vi~~s~~~~~~~~~~~~~~ga~~~i~kp~~~~~l~~~i~~~~ 116 (196)
T PRK10360 37 REALAGLPGRGVQVCICDISMPDISGLELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVA 116 (196)
T ss_pred HHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHccCCCEEEEECCCCHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHHH
Confidence 34444443 23577777543 345677888888778888875332222 3345688999999999999999998776
No 237
>PLN00016 RNA-binding protein; Provisional
Probab=27.99 E-value=56 Score=37.11 Aligned_cols=19 Identities=26% Similarity=0.246 Sum_probs=16.0
Q ss_pred HHHHHHHHCCCceeeccEEEecC
Q 002909 320 ELLLRIKQQGLSVKPQILVVTRL 342 (867)
Q Consensus 320 eLa~~L~~~GheV~~~V~VvT~~ 342 (867)
.|++.|.++||+|+ ++++.
T Consensus 71 ~lv~~L~~~G~~V~----~l~R~ 89 (378)
T PLN00016 71 YLAKELVKAGHEVT----LFTRG 89 (378)
T ss_pred HHHHHHHHCCCEEE----EEecC
Confidence 46678889999999 99985
No 238
>PRK10427 putative PTS system fructose-like transporter subunit EIIB; Provisional
Probab=27.89 E-value=1.1e+02 Score=28.93 Aligned_cols=42 Identities=21% Similarity=0.199 Sum_probs=30.4
Q ss_pred CcceEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecC
Q 002909 279 NMFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRL 342 (867)
Q Consensus 279 m~~rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~ 342 (867)
|+|||+.|+... +|-...|+. +++|++ .-+++||++. |=|..
T Consensus 1 ~~mkivaVtacp------------~GiAht~lA--AeaL~k----AA~~~G~~i~----VE~qg 42 (114)
T PRK10427 1 MMAYLVAVTACV------------SGVAHTYMA--AERLEK----LCQLEKWGVK----IETQG 42 (114)
T ss_pred CCceEEEEeeCC------------CcHHHHHHH--HHHHHH----HHHHCCCeEE----EEecC
Confidence 568998887543 566667765 565554 7889999999 77774
No 239
>PRK11519 tyrosine kinase; Provisional
Probab=27.53 E-value=8.7e+02 Score=30.38 Aligned_cols=42 Identities=17% Similarity=0.159 Sum_probs=26.3
Q ss_pred HHHHHHcCCCCeEEEECCCChH--HHHHHHHHhcCCcEEEEEcC
Q 002909 400 AKILDLMEGKPDLIIGNYSDGN--LVASLMASKLGITQATIAHA 441 (867)
Q Consensus 400 ~~i~~~l~~kPDIIh~h~~~~~--l~a~lla~~~gip~V~t~H~ 441 (867)
..+...+..++|+|+...+... .-+..++...+..+++.-++
T Consensus 626 ~~ll~~l~~~yD~ViiDtpP~~~v~Da~~l~~~~d~~l~Vvr~~ 669 (719)
T PRK11519 626 AELVNWASKNYDLVLIDTPPILAVTDAAIVGRHVGTTLMVARYA 669 (719)
T ss_pred HHHHHHHHhcCCEEEEeCCCcccchHHHHHHHHCCeEEEEEeCC
Confidence 3344444568999998876542 23566777777776655554
No 240
>PF03358 FMN_red: NADPH-dependent FMN reductase; InterPro: IPR005025 NADPH-dependent FMN reductase (1.5.1.29 from EC) reduces FMN and also reduces riboflavin and FAD, although more slowly. Members of this entry catalyse the reaction NAD(P)H + FMN = NAD(P)(+) + FMNH(2).; PDB: 3SVL_B 3GFS_F 3GFQ_A 1NNI_1 2GSW_B 3GFR_D 1T0I_B 3D7N_A 2R97_A 3B6K_A ....
Probab=27.15 E-value=88 Score=30.27 Aligned_cols=39 Identities=18% Similarity=0.405 Sum_probs=24.5
Q ss_pred ceEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEec
Q 002909 281 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTR 341 (867)
Q Consensus 281 ~rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~ 341 (867)
|||++|+ |. |...|....+. +.+++.+.+.|++++ ++-.
T Consensus 1 Mkilii~--gS---------~r~~~~t~~l~-------~~~~~~l~~~g~e~~----~i~l 39 (152)
T PF03358_consen 1 MKILIIN--GS---------PRKNSNTRKLA-------EAVAEQLEEAGAEVE----VIDL 39 (152)
T ss_dssp -EEEEEE--SS---------SSTTSHHHHHH-------HHHHHHHHHTTEEEE----EEEC
T ss_pred CEEEEEE--Cc---------CCCCCHHHHHH-------HHHHHHHHHcCCEEE----EEec
Confidence 7999996 33 23345433333 366678888899999 6654
No 241
>PF04392 ABC_sub_bind: ABC transporter substrate binding protein; InterPro: IPR007487 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energize diverse biological systems. ABC transporters are minimally constituted of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These regions can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. This family contains many hypothetical proteins and some ABC transporter substrate binding proteins.; PDB: 3LFT_A 3LKV_A.
Probab=26.43 E-value=3.4e+02 Score=29.59 Aligned_cols=70 Identities=14% Similarity=0.184 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHcCCCCcEEEcccccCCCChHHHHHHHHccCcEEEEcCC---CCCCCHHHHHHHHcCCCEEecC
Q 002909 626 IAEIKKMHTLIEKYQLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPAL---YEAFGLTVIEAMNCGLPTFATN 698 (867)
Q Consensus 626 ~~~~~~l~~li~~~~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~---~EgfGltvlEAMa~GlPVIat~ 698 (867)
....+.+++.++++|+. +.... ..+..+.....+.+....|+++.+.. ...+...+..+..+++||+++.
T Consensus 146 ~~~~~~~~~~a~~~g~~--l~~~~-v~~~~~~~~~~~~l~~~~da~~~~~~~~~~~~~~~i~~~~~~~~iPv~~~~ 218 (294)
T PF04392_consen 146 VAQIEQLRKAAKKLGIE--LVEIP-VPSSEDLEQALEALAEKVDALYLLPDNLVDSNFEAILQLANEAKIPVFGSS 218 (294)
T ss_dssp HHHHHHHHHHHHHTT-E--EEEEE-ESSGGGHHHHHHHHCTT-SEEEE-S-HHHHHTHHHHHHHCCCTT--EEESS
T ss_pred HHHHHHHHHHHHHcCCE--EEEEe-cCcHhHHHHHHHHhhccCCEEEEECCcchHhHHHHHHHHHHhcCCCEEECC
Confidence 45667788888888764 33222 12222344555555555788777653 2333444556778999999975
No 242
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=25.74 E-value=1.5e+02 Score=30.81 Aligned_cols=48 Identities=23% Similarity=0.346 Sum_probs=36.7
Q ss_pred hhhHHHHHHHHHHHHHHHcCCCCeEEEECCCChHHHHHHHHHhcCCcEE
Q 002909 388 YPYLGRFAQDATAKILDLMEGKPDLIIGNYSDGNLVASLMASKLGITQA 436 (867)
Q Consensus 388 ~p~l~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~l~a~lla~~~gip~V 436 (867)
|..+......+.+.+.+. +.+||+|++-...|-..|.+++..++++-+
T Consensus 9 w~~I~~~~~~lA~kI~~s-~~~PDvIiaiaRGG~~pariLsd~L~~~~l 56 (192)
T COG2236 9 WEEIHRLCRALAEKIRAS-GFKPDVIVAIARGGLIPARILSDFLGVKPL 56 (192)
T ss_pred HHHHHHHHHHHHHHHHHc-CCCCCEEEEEcCCceehHHHHHHHhCCCce
Confidence 555556666677777654 579999999887777789999999998543
No 243
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=25.52 E-value=2.6e+02 Score=29.12 Aligned_cols=40 Identities=15% Similarity=0.267 Sum_probs=28.8
Q ss_pred HHHHHccCcE-EEEcCCCCCCCHHHHHHHHcCCCEEecCCC
Q 002909 661 YRCIADTKGA-FVQPALYEAFGLTVIEAMNCGLPTFATNQG 700 (867)
Q Consensus 661 ~~~la~~aDv-fV~PS~~EgfGltvlEAMa~GlPVIat~~g 700 (867)
-.++....|. .+.|...+...-.+-++...|+|||..+.+
T Consensus 49 ~~~i~~~~d~Iiv~~~~~~~~~~~l~~~~~~gIpvv~~d~~ 89 (257)
T PF13407_consen 49 EQAISQGVDGIIVSPVDPDSLAPFLEKAKAAGIPVVTVDSD 89 (257)
T ss_dssp HHHHHTTESEEEEESSSTTTTHHHHHHHHHTTSEEEEESST
T ss_pred HHHHHhcCCEEEecCCCHHHHHHHHHHHhhcCceEEEEecc
Confidence 3444555664 456666666667788899999999998877
No 244
>PF04844 Ovate: Transcriptional repressor, ovate; InterPro: IPR006458 This group of sequences contain an uncharacterised domain of about 70 residues found exclusively in plants, generally toward the C terminus of proteins of 200 to 350 amino acids in length. At least 14 such proteins are found in Arabidopsis thaliana (Mouse-ear cress). Other regions of these proteins tend to consist largely of low-complexity sequence. Function is not known.
Probab=25.03 E-value=1.1e+02 Score=25.45 Aligned_cols=47 Identities=0% Similarity=0.102 Sum_probs=35.3
Q ss_pred cchHhhHHHHHHHcHHHHHHHHHHHHhcCCCccchhHHHHHHHHHhhh
Q 002909 11 DTIADTMPDALRQSRYYMKKCFSRFVAKGKRLMKRHHLMDEVEKSIED 58 (867)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 58 (867)
.||.|.+.+---...++|..+|.-|.+...+- .+.-|+.+|.+++..
T Consensus 10 ~SM~EMI~~~~i~~~~~LeeLL~cYL~LN~~~-~H~~Iv~aF~dv~~~ 56 (59)
T PF04844_consen 10 ESMVEMIEENGIRDWDDLEELLACYLSLNSPE-HHKFIVEAFVDVWVE 56 (59)
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHhCChh-hhhHHHHHHHHHHHH
Confidence 57888887776668899999999998876652 234478888887753
No 245
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=24.97 E-value=63 Score=36.06 Aligned_cols=17 Identities=29% Similarity=0.389 Sum_probs=14.5
Q ss_pred HHHHHHHCCCceeeccEEEec
Q 002909 321 LLLRIKQQGLSVKPQILVVTR 341 (867)
Q Consensus 321 La~~L~~~GheV~~~V~VvT~ 341 (867)
++..|++.||+|+ ++.+
T Consensus 17 ~A~~L~~~G~~V~----~~~r 33 (341)
T PRK08229 17 LGGRLAAAGADVT----LIGR 33 (341)
T ss_pred HHHHHHhcCCcEE----EEec
Confidence 6668889999999 8877
No 246
>PTZ00215 ribose 5-phosphate isomerase; Provisional
Probab=24.36 E-value=89 Score=31.10 Aligned_cols=32 Identities=28% Similarity=0.312 Sum_probs=24.5
Q ss_pred CcceEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHH--CCCcee
Q 002909 279 NMFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQ--QGLSVK 333 (867)
Q Consensus 279 m~~rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~--~GheV~ 333 (867)
|.|||+|=|.|.-+ .|-+.|.+.|.+ +||+|.
T Consensus 1 ~~mkI~igsDhaG~-----------------------~lK~~l~~~L~~~~~g~eV~ 34 (151)
T PTZ00215 1 MQKKVAIGSDHAGF-----------------------DLKNEIIDYIKNKGKEYKIE 34 (151)
T ss_pred CCcEEEEEeCCchH-----------------------HHHHHHHHHHHhccCCCEEE
Confidence 67899998877642 233467789999 999998
No 247
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=23.88 E-value=62 Score=37.15 Aligned_cols=51 Identities=25% Similarity=0.322 Sum_probs=36.1
Q ss_pred cCCChhhHHHHHhcCCCcceEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecC
Q 002909 263 QAPDAAKLQVLFSRLPNMFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRL 342 (867)
Q Consensus 263 ~~p~~~~l~~f~~r~pm~~rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~ 342 (867)
.+|.+..-..|-+..+..++|+|+...|+ ... .+++.|.++||+|. ++++.
T Consensus 43 ~~~~~~~~~~~~~~~~~~~kVLVtGatG~--------------IG~-----------~l~~~Ll~~G~~V~----~l~R~ 93 (390)
T PLN02657 43 RATAAAAAQSFRSKEPKDVTVLVVGATGY--------------IGK-----------FVVRELVRRGYNVV----AVARE 93 (390)
T ss_pred cCCCccccccccccCCCCCEEEEECCCcH--------------HHH-----------HHHHHHHHCCCEEE----EEEec
Confidence 35666666778788888889988864443 222 45567888999998 88874
No 248
>TIGR01162 purE phosphoribosylaminoimidazole carboxylase, PurE protein. Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, an N5-CAIR mutase.
Probab=23.19 E-value=7.7e+02 Score=24.74 Aligned_cols=121 Identities=17% Similarity=0.216 Sum_probs=66.4
Q ss_pred EEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEcccccCCCChHHHHHHHHc----cCcEEEEcCCCCCCCHHH
Q 002909 609 VVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWIAAQTDRYRNGELYRCIAD----TKGAFVQPALYEAFGLTV 684 (867)
Q Consensus 609 vIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~d~v~~~el~~~la~----~aDvfV~PS~~EgfGltv 684 (867)
+|.|+..| ....++.....+++|++-.++..+..- ..+++.++... ..++|+.-+-.++ .|.-
T Consensus 3 IimGS~SD---------~~~~~~a~~~L~~~gi~~dv~V~SaHR---tp~~~~~~~~~a~~~g~~viIa~AG~aa-~Lpg 69 (156)
T TIGR01162 3 IIMGSDSD---------LPTMKKAADILEEFGIPYELRVVSAHR---TPELMLEYAKEAEERGIKVIIAGAGGAA-HLPG 69 (156)
T ss_pred EEECcHhh---------HHHHHHHHHHHHHcCCCeEEEEECccc---CHHHHHHHHHHHHHCCCeEEEEeCCccc-hhHH
Confidence 56666544 244556666778888888888887532 24556665532 2577777654443 2333
Q ss_pred HHHHHcCCCEEecCC-----CCcc---ceee--cC--ceEEEeC-CCCHHHHHHHHHHHHHHhhcCHHHHHHHHHH
Q 002909 685 IEAMNCGLPTFATNQ-----GGPA---EIII--DG--VSGFHID-PNNGDESSNKIADFFEKCKTDAGYWNQMSAA 747 (867)
Q Consensus 685 lEAMa~GlPVIat~~-----gG~~---EiI~--dg--~~G~lv~-p~d~e~lA~aI~~ll~~~~~dp~~~~~m~~~ 747 (867)
+=|-..-+|||+... +|.. .+++ .| +.-+.++ ..|..-+|..|..+ .|++.|+++...
T Consensus 70 vva~~t~~PVIgvP~~~~~l~G~daLlS~vqmP~gvpvatv~I~~~~nAa~~AaqIl~~-----~d~~l~~kl~~~ 140 (156)
T TIGR01162 70 MVAALTPLPVIGVPVPSKALSGLDSLLSIVQMPSGVPVATVAIGNAGNAALLAAQILGI-----KDPELAEKLKEY 140 (156)
T ss_pred HHHhccCCCEEEecCCccCCCCHHHHHHHhcCCCCCeeEEEEcCChhHHHHHHHHHHcC-----CCHHHHHHHHHH
Confidence 335566788887543 2221 1222 22 1222233 23445555555443 688888877543
No 249
>COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=23.06 E-value=1.6e+02 Score=29.93 Aligned_cols=72 Identities=19% Similarity=0.260 Sum_probs=47.9
Q ss_pred HHHHHHHccCcEEEEcCC------CCCCCHHHHHHHHcCCCEEecCCCC----ccceeecCceEEE-eCCCCHHHHHHHH
Q 002909 659 ELYRCIADTKGAFVQPAL------YEAFGLTVIEAMNCGLPTFATNQGG----PAEIIIDGVSGFH-IDPNNGDESSNKI 727 (867)
Q Consensus 659 el~~~la~~aDvfV~PS~------~EgfGltvlEAMa~GlPVIat~~gG----~~EiI~dg~~G~l-v~p~d~e~lA~aI 727 (867)
.+.+.+.. ||+.+.=-. .-.|.-.+-|.|-|++|+|||-+-- ..+-+.....-++ ++|.|-+.+...|
T Consensus 93 al~rA~~~-aDvIIIDEIGpMElks~~f~~~ve~vl~~~kpliatlHrrsr~P~v~~ik~~~~v~v~lt~~NR~~i~~~I 171 (179)
T COG1618 93 ALRRALEE-ADVIIIDEIGPMELKSKKFREAVEEVLKSGKPLIATLHRRSRHPLVQRIKKLGGVYVFLTPENRNRILNEI 171 (179)
T ss_pred HHHHHhhc-CCEEEEecccchhhccHHHHHHHHHHhcCCCcEEEEEecccCChHHHHhhhcCCEEEEEccchhhHHHHHH
Confidence 45556665 788876321 2346667888999999999985422 3333334433444 8999999888888
Q ss_pred HHHH
Q 002909 728 ADFF 731 (867)
Q Consensus 728 ~~ll 731 (867)
...|
T Consensus 172 l~~L 175 (179)
T COG1618 172 LSVL 175 (179)
T ss_pred HHHh
Confidence 7776
No 250
>PRK13934 stationary phase survival protein SurE; Provisional
Probab=23.03 E-value=6.3e+02 Score=27.60 Aligned_cols=36 Identities=19% Similarity=0.254 Sum_probs=24.9
Q ss_pred ceEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCC
Q 002909 281 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLI 343 (867)
Q Consensus 281 ~rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~ 343 (867)
|||++....|+- +-|. . .|.+.|.+.| +|. |+++..
T Consensus 1 M~ILlTNDDGi~----------apGi----~--------aL~~al~~~g-~V~----VvAP~~ 36 (266)
T PRK13934 1 MKILVTNDDGVH----------SPGL----R--------LLYEFVSPLG-EVD----VVAPET 36 (266)
T ss_pred CeEEEEcCCCCC----------CHHH----H--------HHHHHHHhCC-cEE----EEccCC
Confidence 689999998883 3333 2 3445666677 788 888753
No 251
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=23.02 E-value=1.9e+02 Score=28.16 Aligned_cols=61 Identities=18% Similarity=0.274 Sum_probs=33.2
Q ss_pred hccccCCchhhHHHHHHHHhcccCCceeeccCcCCCHHHHHHHHHHHHHHhccCCCCCChhHHHHHHhhcCCccccCCcH
Q 002909 169 STRLSANSEKAKQFLDYLLALNHRGEQLMINDTLDTVDKLQAALIAAEVSISDLPKDTPYQEFQQRFKEWGFEKGWGNTA 248 (867)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 248 (867)
|+-+-+.-..+..+.+.|+....++..+++-..+-- ++.-+.+++.+|+++||....|-++
T Consensus 59 S~l~~~~~~~~~~~~~~l~~~gl~~~~vivGG~~vi-------------------~~~d~~~~~~~l~~~Gv~~vF~pgt 119 (134)
T TIGR01501 59 SSLYGHGEIDCKGLRQKCDEAGLEGILLYVGGNLVV-------------------GKQDFPDVEKRFKEMGFDRVFAPGT 119 (134)
T ss_pred ecccccCHHHHHHHHHHHHHCCCCCCEEEecCCcCc-------------------ChhhhHHHHHHHHHcCCCEEECcCC
Confidence 333333335555566666665555555555544220 1122334556899999888777544
No 252
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=23.02 E-value=7e+02 Score=27.81 Aligned_cols=138 Identities=10% Similarity=0.089 Sum_probs=81.1
Q ss_pred CCCcEEEEEeccCCcCChHHHHHHH----HHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEE
Q 002909 572 RKKPIIFSMARLDTVKNITGLTEWY----GKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRW 647 (867)
Q Consensus 572 ~~k~iIl~vGRL~~~Kgid~LieA~----~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~f 647 (867)
....+|.+.|-+.+... +.+.++. .++..+....-.|+|||....+...+.......+.+.+++++.+ ..+.+
T Consensus 111 ~~~Nvl~t~ga~~~i~~-~~l~~a~~~~~~~~~~l~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~--~~~~v 187 (311)
T PF06258_consen 111 RGPNVLPTLGAPNRITP-ERLAEAAAAWAPRLAALPRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYG--GSLLV 187 (311)
T ss_pred CCCceEecccCCCcCCH-HHHHHHHHhhhhhhccCCCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCC--CeEEE
Confidence 34557788887766442 3334433 23333334566889998665444444444566778888888876 34666
Q ss_pred cccccCCCChHHHHHHHHccC----cEEEEcCCCCCCCHHHHHHHHcCCCEEecCC--CCccceeecCceEEEeCCC
Q 002909 648 IAAQTDRYRNGELYRCIADTK----GAFVQPALYEAFGLTVIEAMNCGLPTFATNQ--GGPAEIIIDGVSGFHIDPN 718 (867)
Q Consensus 648 lG~~~d~v~~~el~~~la~~a----DvfV~PS~~EgfGltvlEAMa~GlPVIat~~--gG~~EiI~dg~~G~lv~p~ 718 (867)
+.+.- ...++...+.+.. .+.+. ..++ .+.+.+.|++.--+|+|.- .-+.|.+..|..-++++..
T Consensus 188 ttSRR---Tp~~~~~~L~~~~~~~~~~~~~--~~~~-~nPy~~~La~ad~i~VT~DSvSMvsEA~~tG~pV~v~~l~ 258 (311)
T PF06258_consen 188 TTSRR---TPPEAEAALRELLKDNPGVYIW--DGTG-ENPYLGFLAAADAIVVTEDSVSMVSEAAATGKPVYVLPLP 258 (311)
T ss_pred EcCCC---CcHHHHHHHHHhhcCCCceEEe--cCCC-CCcHHHHHHhCCEEEEcCccHHHHHHHHHcCCCEEEecCC
Confidence 55422 1234444433322 34344 2333 4468899999988888843 4457777777766666544
No 253
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=22.94 E-value=8.4e+02 Score=26.86 Aligned_cols=29 Identities=21% Similarity=0.137 Sum_probs=17.2
Q ss_pred CcEEEEcCC-CCCCCHHHHHHHH--cCCCEEe
Q 002909 668 KGAFVQPAL-YEAFGLTVIEAMN--CGLPTFA 696 (867)
Q Consensus 668 aDvfV~PS~-~EgfGltvlEAMa--~GlPVIa 696 (867)
+|+++-.|. .-.|.--++++|+ |..|+|-
T Consensus 106 ptvlIG~S~~~g~ft~evv~~Ma~~~~~PIIF 137 (279)
T cd05312 106 PTVLIGLSGVGGAFTEEVVRAMAKSNERPIIF 137 (279)
T ss_pred CCEEEEeCCCCCCCCHHHHHHHHhcCCCCEEE
Confidence 567776664 3446666666666 4555554
No 254
>PRK05647 purN phosphoribosylglycinamide formyltransferase; Reviewed
Probab=22.21 E-value=7.7e+02 Score=25.53 Aligned_cols=21 Identities=14% Similarity=0.075 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHcCCCCeEEEECCC
Q 002909 395 AQDATAKILDLMEGKPDLIIGNYS 418 (867)
Q Consensus 395 ~~~~~~~i~~~l~~kPDIIh~h~~ 418 (867)
...+...+.. .+||+|.+..+
T Consensus 69 ~~~~~~~l~~---~~~D~iv~~~~ 89 (200)
T PRK05647 69 DAALVEALDA---YQPDLVVLAGF 89 (200)
T ss_pred HHHHHHHHHH---hCcCEEEhHHh
Confidence 3344444444 38999987543
No 255
>COG1832 Predicted CoA-binding protein [General function prediction only]
Probab=22.00 E-value=7.6e+02 Score=24.31 Aligned_cols=107 Identities=15% Similarity=0.128 Sum_probs=57.0
Q ss_pred cceEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCceeeccEEEecCCC--CCCCCCCCCcccc
Q 002909 280 MFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVKPQILVVTRLIP--NSKGTKCSQELEP 357 (867)
Q Consensus 280 ~~rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~~~V~VvT~~~~--~~~g~~~~~~~e~ 357 (867)
..+|++|..+.-| +.-+- ..++.|.++||+|. =+-+... .-.|..+-..+..
T Consensus 16 ~K~IAvVG~S~~P---------~r~sy-------------~V~kyL~~~GY~Vi----PVNP~~~~~eiLG~k~y~sL~d 69 (140)
T COG1832 16 AKTIAVVGASDKP---------DRPSY-------------RVAKYLQQKGYRVI----PVNPKLAGEEILGEKVYPSLAD 69 (140)
T ss_pred CceEEEEecCCCC---------CccHH-------------HHHHHHHHCCCEEE----eeCcccchHHhcCchhhhcHHh
Confidence 4679999876655 22222 45678999999987 4444211 1123333334444
Q ss_pred ccCCCCeEEEEccCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEECCCChHHHHHHHHHhcCCcEE
Q 002909 358 IYDTKHSHILRIPFKTEQAILPQWVSRFDIYPYLGRFAQDATAKILDLMEGKPDLIIGNYSDGNLVASLMASKLGITQA 436 (867)
Q Consensus 358 i~~~~~v~I~rvp~~~~~~~l~~~isr~~i~p~l~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~l~a~lla~~~gip~V 436 (867)
++. .+.++.+-.+. .++..+.+.+.+. .+.+|......-+.-+...++..|+.+|
T Consensus 70 Ipe--~IDiVdvFR~~-------------------e~~~~i~~eal~~---~~kv~W~QlGi~n~ea~~~~~~aG~~vV 124 (140)
T COG1832 70 IPE--PIDIVDVFRRS-------------------EAAPEVAREALEK---GAKVVWLQLGIRNEEAAEKARDAGLDVV 124 (140)
T ss_pred CCC--CCcEEEEecCh-------------------hhhHHHHHHHHhh---CCCeEEEecCcCCHHHHHHHHHhCcHHH
Confidence 432 34444332111 2333444444443 4777777665555556666676776543
No 256
>CHL00194 ycf39 Ycf39; Provisional
Probab=21.85 E-value=73 Score=35.12 Aligned_cols=19 Identities=16% Similarity=0.382 Sum_probs=15.4
Q ss_pred HHHHHHHHCCCceeeccEEEecC
Q 002909 320 ELLLRIKQQGLSVKPQILVVTRL 342 (867)
Q Consensus 320 eLa~~L~~~GheV~~~V~VvT~~ 342 (867)
.++++|.++||+|. +++|.
T Consensus 15 ~lv~~Ll~~g~~V~----~l~R~ 33 (317)
T CHL00194 15 QIVRQALDEGYQVR----CLVRN 33 (317)
T ss_pred HHHHHHHHCCCeEE----EEEcC
Confidence 46668888999999 88884
No 257
>PRK09739 hypothetical protein; Provisional
Probab=21.81 E-value=1.4e+02 Score=30.56 Aligned_cols=36 Identities=14% Similarity=0.242 Sum_probs=23.7
Q ss_pred cceEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCcee
Q 002909 280 MFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVK 333 (867)
Q Consensus 280 ~~rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~ 333 (867)
+|||++|+.|- ..+|...- |.+.+.+.+.+.|++|+
T Consensus 3 mmkiliI~~sp-----------~~~s~s~~-------l~~~~~~~~~~~g~~v~ 38 (199)
T PRK09739 3 SMRIYLVWAHP-----------RHDSLTAK-------VAEAIHQRAQERGHQVE 38 (199)
T ss_pred CceEEEEEcCC-----------CCCCcHHH-------HHHHHHHHHHHCCCEEE
Confidence 47999997553 23444322 23366678888999988
No 258
>TIGR00732 dprA DNA protecting protein DprA. Disruption of this gene in both Haemophilus influenzae and Helicobacter pylori drastically reduces the efficiency of transformation with exogenous DNA, but with different levels of effect on chromosomal (linear) and plasmid (circular) DNA. This difference suggests the DprA is not active in recombination, and it has been shown not to affect DNA binding, leaving the intermediate step in natural transformation, DNA processing. In Strep. pneumoniae, inactivation of dprA had no effect on the uptake of DNA. All of these data indicated that DprA is required at a later stage in transformation. Subsequently DprA and RecA were both shown in S. pneumoniae to be required to protect incoming ssDNA from immediate degradation. Role of DprA in non-transformable species is not known. The gene symbol smf was assigned in E. coli, but without assignment of function.
Probab=21.80 E-value=5e+02 Score=27.41 Aligned_cols=49 Identities=24% Similarity=0.217 Sum_probs=31.3
Q ss_pred HHHHHccCcEEEEcCCCCCCC--HHHHHHHHcCCCEEecCC-------CCccceeecC
Q 002909 661 YRCIADTKGAFVQPALYEAFG--LTVIEAMNCGLPTFATNQ-------GGPAEIIIDG 709 (867)
Q Consensus 661 ~~~la~~aDvfV~PS~~EgfG--ltvlEAMa~GlPVIat~~-------gG~~EiI~dg 709 (867)
-++++..++..|...-.+..| .++-.|+..|+||++-.. .|...+|.+|
T Consensus 149 Nriia~ls~~vivve~~~~sGtl~ta~~A~~~gr~v~~~pg~~~~~~~~G~~~Li~~G 206 (220)
T TIGR00732 149 NRIISGLSRAVLVVEAPLKSGALITARYALEQGREVFAYPGDLNSPESDGCHKLIEQG 206 (220)
T ss_pred HHHHHHhcCEEEEEECCCCCchHHHHHHHHHhCCcEEEEcCCCCCccchHHHHHHHCC
Confidence 344444455555543334444 578899999999999732 4566777776
No 259
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=21.78 E-value=4.5e+02 Score=26.87 Aligned_cols=121 Identities=11% Similarity=0.022 Sum_probs=63.4
Q ss_pred CcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCCCcEEEc-cc--ccCCCChHHHH
Q 002909 585 TVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQGQFRWI-AA--QTDRYRNGELY 661 (867)
Q Consensus 585 ~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~fl-G~--~~d~v~~~el~ 661 (867)
...|...+++.+. +. .+++.|+-++.. ..+....+.+++.+.+..+ +. .....+..+.+
T Consensus 83 ~~~g~~~~l~~L~---~~--g~~~~i~S~~~~-------------~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~p~~~ 144 (214)
T PRK13288 83 EYETVYETLKTLK---KQ--GYKLGIVTTKMR-------------DTVEMGLKLTGLDEFFDVVITLDDVEHAKPDPEPV 144 (214)
T ss_pred cCcCHHHHHHHHH---HC--CCeEEEEeCCCH-------------HHHHHHHHHcCChhceeEEEecCcCCCCCCCcHHH
Confidence 3455555555544 32 578888877754 4455666777876544322 21 11123445666
Q ss_pred HHHHccCcEEEEcCC---CCCCCHHHHHHHHcCCCEEecCCCC-ccceeecCceEEEeCCCCHHHHHHHH
Q 002909 662 RCIADTKGAFVQPAL---YEAFGLTVIEAMNCGLPTFATNQGG-PAEIIIDGVSGFHIDPNNGDESSNKI 727 (867)
Q Consensus 662 ~~la~~aDvfV~PS~---~EgfGltvlEAMa~GlPVIat~~gG-~~EiI~dg~~G~lv~p~d~e~lA~aI 727 (867)
..+....+ +.|+. .+--..=+.-|.++|+++|+-..|. ..+-+.....-+.++ +..++.+.+
T Consensus 145 ~~~~~~~~--~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~--~~~~l~~~i 210 (214)
T PRK13288 145 LKALELLG--AKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLD--KMSDLLAIV 210 (214)
T ss_pred HHHHHHcC--CCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEEC--CHHHHHHHH
Confidence 65544222 22321 1222344667889999999866553 222222222345665 777766654
No 260
>COG2120 Uncharacterized proteins, LmbE homologs [Function unknown]
Probab=21.53 E-value=2.3e+02 Score=30.26 Aligned_cols=33 Identities=24% Similarity=0.509 Sum_probs=22.0
Q ss_pred cceEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCcee
Q 002909 280 MFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVK 333 (867)
Q Consensus 280 ~~rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~ 333 (867)
.++|++|.+|-= +.++|- ||. ...++++|++|.
T Consensus 10 ~~~vL~v~aHPD---De~~g~---ggt---------------la~~~~~G~~V~ 42 (237)
T COG2120 10 PLRVLVVFAHPD---DEEIGC---GGT---------------LAKLAARGVEVT 42 (237)
T ss_pred CCcEEEEecCCc---chhhcc---HHH---------------HHHHHHCCCeEE
Confidence 578999998853 223433 555 224678999999
No 261
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=21.41 E-value=5.7e+02 Score=26.57 Aligned_cols=110 Identities=8% Similarity=0.103 Sum_probs=63.2
Q ss_pred EEEEeccCC--cCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHc-CCCCcEEEcccccC
Q 002909 577 IFSMARLDT--VKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKY-QLQGQFRWIAAQTD 653 (867)
Q Consensus 577 Il~vGRL~~--~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~-~L~~~V~flG~~~d 653 (867)
++.-|..++ ..+.+.+.+.+..+. ..+.+++++..... +.+ ++...+++..+++ +..-.+..+-
T Consensus 3 ~~igg~~~~~~~~~~~~l~~~l~~~~--~~~~~i~~IptAs~-----~~~--~~~~~~~~a~~~l~G~~~~~~~~~---- 69 (212)
T cd03146 3 LLTSGGGLGYLAHALPAIDDLLLSLT--KARPKVLFVPTASG-----DRD--EYTARFYAAFESLRGVEVSHLHLF---- 69 (212)
T ss_pred EEEeCCcccccccchHHHHHHHHHhc--cCCCeEEEECCCCC-----CHH--HHHHHHHHHHhhccCcEEEEEecc----
Confidence 344444443 345666666666554 24678888887654 222 4566677777777 6532222211
Q ss_pred CCChHHHHHHHHccCcEEEEcCC--------CCCCCH--HHHHHHHcCCCEEecCCCCc
Q 002909 654 RYRNGELYRCIADTKGAFVQPAL--------YEAFGL--TVIEAMNCGLPTFATNQGGP 702 (867)
Q Consensus 654 ~v~~~el~~~la~~aDvfV~PS~--------~EgfGl--tvlEAMa~GlPVIat~~gG~ 702 (867)
+.++....+.. ||++++|=- +...|+ .+-++...|+|++.+..|..
T Consensus 70 --~~~~~~~~l~~-ad~I~l~GG~~~~~~~~l~~~~l~~~l~~~~~~g~~i~G~SAGa~ 125 (212)
T cd03146 70 --DTEDPLDALLE-ADVIYVGGGNTFNLLAQWREHGLDAILKAALERGVVYIGWSAGSN 125 (212)
T ss_pred --CcccHHHHHhc-CCEEEECCchHHHHHHHHHHcCHHHHHHHHHHCCCEEEEECHhHH
Confidence 12344566665 999999831 111232 34556678999999987654
No 262
>COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=20.91 E-value=9.1e+02 Score=24.69 Aligned_cols=36 Identities=14% Similarity=0.346 Sum_probs=24.1
Q ss_pred CCCcceEEEEccCccCCcccccCCCCcccchhHhHHHHHHHHHHHHHHHHHCCCcee
Q 002909 277 LPNMFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLSVK 333 (867)
Q Consensus 277 ~pm~~rI~ivs~hg~p~~~~vlG~pdtGG~~vyvld~araL~~eLa~~L~~~GheV~ 333 (867)
++|.|||.|-. -| -. |-.+.++ .+++.|.+.|+.|-
T Consensus 2 ~~~~mki~ITG---~P---------Gv-GKtTl~~--------ki~e~L~~~g~kvg 37 (179)
T COG1618 2 IKMAMKIFITG---RP---------GV-GKTTLVL--------KIAEKLREKGYKVG 37 (179)
T ss_pred CCcceEEEEeC---CC---------Cc-cHHHHHH--------HHHHHHHhcCceee
Confidence 57889997763 23 22 3345555 67778888998876
No 263
>PRK04020 rps2P 30S ribosomal protein S2; Provisional
Probab=20.84 E-value=7.1e+02 Score=26.08 Aligned_cols=105 Identities=18% Similarity=0.109 Sum_probs=59.0
Q ss_pred CCcCChHHHHHHHHHhHccCCCeEEEEEeCCCCCCCCCChHHHHHHHHHHHHHHHcCCC-CcEEEcccccCCCChHHHHH
Q 002909 584 DTVKNITGLTEWYGKNKRLRNMVNLVVVAGFFDPSKSHDREEIAEIKKMHTLIEKYQLQ-GQFRWIAAQTDRYRNGELYR 662 (867)
Q Consensus 584 ~~~Kgid~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~-~~V~flG~~~d~v~~~el~~ 662 (867)
+-.|=+..|..|+.-+... ..-++++||..+. ..+.+++.++..+.. -+=+|+|-... +..+-.
T Consensus 47 dL~kT~~~L~~A~~~i~~~-~~~~ILfVgTk~~-----------~~~~v~k~A~~~g~~~v~~RWlgG~LT---N~~~~~ 111 (204)
T PRK04020 47 DVRKTDERIRIAAKFLSRY-EPEKILVVSSRQY-----------GQKPVQKFAEVVGAKAITGRFIPGTLT---NPSLKG 111 (204)
T ss_pred cHHHHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-----------HHHHHHHHHHHhCCeeecCccCCCcCc---Ccchhc
Confidence 4455566777777666554 3467888998754 234455566655532 11268774322 112222
Q ss_pred HHHccCcEEEEcCCCCCCCHHHHHHHHcCCCEEec-CCCCcccee
Q 002909 663 CIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT-NQGGPAEII 706 (867)
Q Consensus 663 ~la~~aDvfV~PS~~EgfGltvlEAMa~GlPVIat-~~gG~~EiI 706 (867)
++ - =|+.+..... .-..++.||--.|+|||+- |.-...+.|
T Consensus 112 ~~-~-Pdliiv~dp~-~~~~AI~EA~kl~IP~IaivDTn~dp~~V 153 (204)
T PRK04020 112 YI-E-PDVVVVTDPR-GDAQAVKEAIEVGIPVVALCDTDNLTSNV 153 (204)
T ss_pred cC-C-CCEEEEECCc-ccHHHHHHHHHhCCCEEEEEeCCCCcccC
Confidence 22 1 3444443221 1257899999999999995 444445554
No 264
>cd00762 NAD_bind_malic_enz NAD(P) binding domain of malic enzyme. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glut
Probab=20.70 E-value=4.7e+02 Score=28.38 Aligned_cols=37 Identities=19% Similarity=0.131 Sum_probs=24.5
Q ss_pred HHHHHH--ccCcEEEEcCC-CCCCCHHHHHHHH--cCCCEEec
Q 002909 660 LYRCIA--DTKGAFVQPAL-YEAFGLTVIEAMN--CGLPTFAT 697 (867)
Q Consensus 660 l~~~la--~~aDvfV~PS~-~EgfGltvlEAMa--~GlPVIat 697 (867)
|...+. . .|+++-.|. .-.|---++++|+ |..|+|-.
T Consensus 98 L~eav~~~k-ptvlIG~S~~~g~ft~evv~~Ma~~~~~PIIFa 139 (254)
T cd00762 98 LEDAVEAAK-PDFLIGVSRVGGAFTPEVIRAXAEINERPVIFA 139 (254)
T ss_pred HHHHHHhhC-CCEEEEeCCCCCCCCHHHHHHHhhcCCCCEEEE
Confidence 444444 4 788888776 4457777888887 56677654
Done!