Query 002922
Match_columns 865
No_of_seqs 334 out of 1224
Neff 4.6
Searched_HMMs 29240
Date Mon Mar 25 06:43:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002922.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002922hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 99.9 5.6E-23 1.9E-27 200.4 15.4 149 589-754 5-163 (169)
2 1ul4_A SPL4, squamosa promoter 99.9 1.6E-24 5.3E-29 195.5 -2.0 59 1-59 35-93 (94)
3 2jab_A H10-2-G3; HER2, darpin, 99.9 1.3E-21 4.6E-26 180.0 14.0 123 587-749 13-135 (136)
4 1d9s_A Cyclin-dependent kinase 99.9 5E-22 1.7E-26 182.9 10.7 125 587-752 11-136 (136)
5 1ul5_A SPL7, squamosa promoter 99.9 6E-24 2.1E-28 189.8 -2.8 56 1-56 30-85 (88)
6 1oy3_D Transcription factor in 99.9 1.6E-21 5.5E-26 196.0 13.7 166 588-771 45-271 (282)
7 1awc_B Protein (GA binding pro 99.9 2.1E-21 7.2E-26 181.4 12.8 124 588-752 2-125 (153)
8 1n0r_A 4ANK, 4 ankyrin repeats 99.9 5.3E-21 1.8E-25 169.7 14.5 124 589-752 3-126 (126)
9 1oy3_D Transcription factor in 99.9 3.9E-21 1.3E-25 193.2 15.0 165 588-766 9-233 (282)
10 1s70_B 130 kDa myosin-binding 99.9 4.1E-21 1.4E-25 196.0 14.5 163 588-767 73-274 (299)
11 4b93_B Ankyrin repeat domain-c 99.8 2.8E-21 9.7E-26 200.3 13.3 161 589-767 53-227 (269)
12 3v30_A DNA-binding protein rfx 99.8 8.8E-21 3E-25 179.6 15.2 127 588-754 36-162 (172)
13 2dzn_A Probable 26S proteasome 99.8 1.2E-20 4.1E-25 184.8 16.5 164 588-766 36-216 (228)
14 1ihb_A P18-INK4C(INK6), cyclin 99.8 2E-21 6.8E-26 181.5 10.1 147 587-751 4-161 (162)
15 2rfm_A Putative ankyrin repeat 99.8 3.4E-21 1.2E-25 186.0 11.8 145 588-749 35-189 (192)
16 2y1l_E Darpin-8.4; hydrolase-i 99.8 6.1E-21 2.1E-25 181.4 13.3 123 589-751 15-137 (169)
17 3twr_A Tankyrase-2; ankyrin re 99.8 7.6E-21 2.6E-25 178.9 13.1 138 589-766 9-149 (165)
18 1yyh_A HN1;, notch 1, ankyrin 99.8 7.1E-21 2.4E-25 192.2 13.7 161 588-765 57-230 (253)
19 3utm_A Tankyrase-1; tankyrase, 99.8 1.3E-20 4.4E-25 194.3 15.9 162 588-767 91-322 (351)
20 3v31_A Ankyrin repeat family A 99.8 5.6E-21 1.9E-25 180.1 12.1 150 588-754 3-162 (167)
21 3aji_A 26S proteasome non-ATPa 99.8 1.3E-20 4.4E-25 185.4 14.8 161 588-765 40-212 (231)
22 2rfa_A Transient receptor pote 99.8 2.3E-20 7.7E-25 184.2 16.5 161 588-754 37-224 (232)
23 3v30_A DNA-binding protein rfx 99.8 5E-21 1.7E-25 181.3 11.2 138 589-765 3-142 (172)
24 1ihb_A P18-INK4C(INK6), cyclin 99.8 6.7E-21 2.3E-25 177.9 12.0 112 588-711 38-160 (162)
25 1awc_B Protein (GA binding pro 99.8 1.4E-20 4.7E-25 175.8 13.8 120 588-747 34-153 (153)
26 1bd8_A P19INK4D CDK4/6 inhibit 99.8 6.3E-21 2.2E-25 177.5 11.4 123 587-749 1-123 (156)
27 3v31_A Ankyrin repeat family A 99.8 1.9E-20 6.3E-25 176.6 14.6 112 588-710 36-157 (167)
28 1bi7_B P16INK4A, MTS1, multipl 99.8 2.2E-21 7.4E-26 182.6 8.0 125 587-752 11-136 (156)
29 3f6q_A Integrin-linked protein 99.8 1E-20 3.5E-25 181.1 12.9 139 588-766 5-146 (179)
30 2etb_A Transient receptor pote 99.8 6.9E-21 2.4E-25 191.4 11.9 151 588-753 43-207 (256)
31 2rfa_A Transient receptor pote 99.8 9.9E-21 3.4E-25 186.7 12.9 148 588-752 3-183 (232)
32 2xai_A ASB-9, ankyrin repeat a 99.8 1.4E-20 4.9E-25 191.2 14.0 160 588-766 36-207 (261)
33 2f8y_A Notch homolog 1, transl 99.8 2.3E-20 8E-25 182.6 14.9 148 588-752 25-183 (223)
34 4g8k_A 2-5A-dependent ribonucl 99.8 2.3E-20 7.7E-25 195.4 15.7 160 588-754 125-300 (337)
35 3jxi_A Vanilloid receptor-rela 99.8 9.5E-21 3.2E-25 190.4 12.2 164 588-765 46-232 (260)
36 2rfm_A Putative ankyrin repeat 99.8 3.4E-20 1.2E-24 179.0 14.8 111 588-709 68-188 (192)
37 2y1l_E Darpin-8.4; hydrolase-i 99.8 3.6E-20 1.2E-24 176.1 14.5 122 588-749 47-168 (169)
38 1k1a_A B-cell lymphoma 3-encod 99.8 4.6E-20 1.6E-24 181.7 15.7 162 588-767 46-225 (241)
39 3jxi_A Vanilloid receptor-rela 99.8 1.7E-20 5.7E-25 188.6 12.6 138 587-754 92-252 (260)
40 1bd8_A P19INK4D CDK4/6 inhibit 99.8 2.4E-20 8.4E-25 173.5 12.9 120 588-749 36-155 (156)
41 4hbd_A KN motif and ankyrin re 99.8 5.2E-20 1.8E-24 190.3 16.0 134 588-751 111-274 (276)
42 3twr_A Tankyrase-2; ankyrin re 99.8 1.8E-20 6.1E-25 176.4 11.1 123 588-751 42-164 (165)
43 2pnn_A Transient receptor pote 99.8 2.9E-20 1E-24 188.9 13.5 161 588-765 54-240 (273)
44 2dzn_A Probable 26S proteasome 99.8 3.7E-20 1.3E-24 181.3 13.7 161 589-765 3-181 (228)
45 3b7b_A Euchromatic histone-lys 99.8 6.4E-20 2.2E-24 181.1 14.7 161 588-765 11-184 (237)
46 2etb_A Transient receptor pote 99.8 3.7E-20 1.3E-24 186.1 12.9 134 588-752 90-246 (256)
47 1ikn_D Protein (I-kappa-B-alph 99.8 2.5E-20 8.4E-25 185.2 11.4 143 588-765 45-191 (236)
48 3hra_A Ankyrin repeat family p 99.8 8E-20 2.7E-24 176.0 14.6 147 588-749 39-200 (201)
49 3d9h_A CDNA FLJ77766, highly s 99.8 7.4E-20 2.5E-24 189.3 15.3 160 588-766 92-263 (285)
50 3hra_A Ankyrin repeat family p 99.8 3.4E-20 1.2E-24 178.6 11.9 163 589-765 6-185 (201)
51 3b7b_A Euchromatic histone-lys 99.8 8.9E-20 3E-24 180.1 15.1 162 588-767 44-219 (237)
52 3aaa_C Myotrophin, protein V-1 99.8 5.9E-20 2E-24 165.9 12.7 116 588-746 7-122 (123)
53 3c5r_A BARD-1, BRCA1-associate 99.8 6.9E-21 2.4E-25 174.7 6.1 124 587-750 9-132 (137)
54 2pnn_A Transient receptor pote 99.8 5.1E-20 1.7E-24 187.2 12.6 135 588-752 101-258 (273)
55 3f6q_A Integrin-linked protein 99.8 3.2E-20 1.1E-24 177.7 10.4 127 588-754 39-165 (179)
56 3t8k_A Uncharacterized protein 99.8 2.1E-20 7.1E-25 184.6 8.5 129 588-754 38-181 (186)
57 3ljn_A Hypothetical protein; a 99.8 1.1E-19 3.7E-24 192.2 14.3 130 588-752 138-269 (364)
58 3utm_A Tankyrase-1; tankyrase, 99.8 1.4E-19 4.7E-24 186.7 14.5 162 588-766 58-288 (351)
59 2xai_A ASB-9, ankyrin repeat a 99.8 1.3E-19 4.4E-24 184.2 14.0 159 589-765 4-173 (261)
60 1wdy_A 2-5A-dependent ribonucl 99.8 1.8E-19 6E-24 180.1 14.7 162 588-765 72-260 (285)
61 1dcq_A PYK2-associated protein 99.8 1.9E-19 6.6E-24 187.9 15.5 139 589-763 131-272 (278)
62 1ikn_D Protein (I-kappa-B-alph 99.8 5.7E-20 2E-24 182.6 10.8 132 588-753 78-210 (236)
63 3ljn_A Hypothetical protein; a 99.8 3.7E-20 1.3E-24 195.8 9.9 160 589-766 21-219 (364)
64 2f8y_A Notch homolog 1, transl 99.8 2.7E-19 9.1E-24 175.1 14.6 150 589-754 59-218 (223)
65 1n0q_A 3ANK, 3 ankyrin repeats 99.8 1.7E-19 5.9E-24 156.0 11.2 92 629-751 1-92 (93)
66 3aji_A 26S proteasome non-ATPa 99.8 2E-19 7E-24 176.8 13.0 148 588-752 73-230 (231)
67 2vge_A RELA-associated inhibit 99.8 1.1E-19 3.6E-24 184.0 11.1 135 589-763 22-161 (229)
68 1ycs_B 53BP2, P53BP2; ankyrin 99.8 8E-20 2.7E-24 184.1 9.9 136 589-765 6-144 (239)
69 1k1a_A B-cell lymphoma 3-encod 99.8 6.7E-19 2.3E-23 173.4 16.2 165 588-765 9-190 (241)
70 4g8k_A 2-5A-dependent ribonucl 99.8 4.3E-19 1.5E-23 185.7 15.6 164 589-763 26-207 (337)
71 3deo_A Signal recognition part 99.8 1.4E-19 4.9E-24 174.8 11.0 111 587-738 43-154 (183)
72 3ehr_A Osteoclast-stimulating 99.8 6.1E-20 2.1E-24 181.5 8.3 127 588-754 73-200 (222)
73 2b0o_E UPLC1; arfgap, structur 99.8 3.6E-19 1.2E-23 188.1 14.6 140 590-767 153-295 (301)
74 3kea_A K1L; tropism, ANK repea 99.8 8E-20 2.7E-24 189.4 9.3 156 588-765 31-202 (285)
75 1yyh_A HN1;, notch 1, ankyrin 99.8 2.5E-19 8.4E-24 180.9 12.6 146 589-750 91-246 (253)
76 1wdy_A 2-5A-dependent ribonucl 99.8 7.8E-19 2.7E-23 175.4 16.0 158 588-754 105-280 (285)
77 3d9h_A CDNA FLJ77766, highly s 99.8 3.5E-19 1.2E-23 184.2 13.9 160 588-765 59-229 (285)
78 1ycs_B 53BP2, P53BP2; ankyrin 99.8 1.4E-19 4.8E-24 182.3 10.2 126 589-754 38-166 (239)
79 1sw6_A Regulatory protein SWI6 99.8 1.1E-19 3.6E-24 192.3 9.4 145 588-766 131-324 (327)
80 1n11_A Ankyrin; clathrin, BAND 99.8 2.9E-19 9.8E-24 193.1 12.6 162 588-766 212-385 (437)
81 1s70_B 130 kDa myosin-binding 99.8 4.9E-19 1.7E-23 180.7 12.8 165 589-765 41-239 (299)
82 2fo1_E LIN-12 protein; beta-ba 99.8 4.8E-19 1.6E-23 190.3 13.2 151 588-752 199-371 (373)
83 4b93_B Ankyrin repeat domain-c 99.8 7.8E-20 2.7E-24 189.5 6.6 141 588-747 86-236 (269)
84 2fo1_E LIN-12 protein; beta-ba 99.8 2.9E-19 9.8E-24 192.0 10.9 161 588-765 166-353 (373)
85 3ui2_A Signal recognition part 99.8 4.6E-19 1.6E-23 180.0 11.7 124 588-752 45-185 (244)
86 3eu9_A Huntingtin-interacting 99.8 2.9E-18 1E-22 167.4 16.0 150 588-754 76-237 (240)
87 3lvq_E ARF-GAP with SH3 domain 99.8 1.1E-18 3.7E-23 195.7 14.0 138 590-765 134-274 (497)
88 3c5r_A BARD-1, BRCA1-associate 99.8 9.5E-19 3.2E-23 160.5 10.2 110 626-767 6-118 (137)
89 4hbd_A KN motif and ankyrin re 99.8 5E-19 1.7E-23 182.9 8.5 160 590-765 78-257 (276)
90 4gpm_A Engineered protein OR26 99.8 1.8E-18 6.2E-23 168.5 11.1 125 632-765 6-143 (169)
91 1n11_A Ankyrin; clathrin, BAND 99.8 1.7E-18 5.8E-23 187.1 11.7 161 588-766 14-187 (437)
92 3jue_A Arfgap with coiled-coil 99.8 3.6E-18 1.2E-22 187.0 14.2 142 589-769 200-348 (368)
93 3aaa_C Myotrophin, protein V-1 99.7 3.6E-18 1.2E-22 154.2 10.8 107 628-766 5-114 (123)
94 3t8k_A Uncharacterized protein 99.7 4.3E-19 1.5E-23 175.3 4.7 136 590-767 8-163 (186)
95 3kea_A K1L; tropism, ANK repea 99.7 1.7E-18 5.7E-23 179.5 8.9 148 588-754 62-222 (285)
96 3eu9_A Huntingtin-interacting 99.7 1.1E-17 3.7E-22 163.4 12.9 146 589-751 10-167 (240)
97 1d9s_A Cyclin-dependent kinase 99.7 1.3E-18 4.3E-23 160.1 5.1 109 625-765 7-118 (136)
98 2jab_A H10-2-G3; HER2, darpin, 99.7 9.4E-18 3.2E-22 154.3 9.2 107 627-765 11-120 (136)
99 2l6b_A NR1C; ankyrin, consensu 99.7 1.3E-17 4.5E-22 148.5 7.9 95 627-752 6-100 (115)
100 1sw6_A Regulatory protein SWI6 99.7 4.6E-18 1.6E-22 179.8 5.2 123 590-750 99-228 (327)
101 3ehr_A Osteoclast-stimulating 99.7 3.3E-17 1.1E-21 161.9 11.0 110 627-767 70-182 (222)
102 2vge_A RELA-associated inhibit 99.7 3.1E-17 1.1E-21 165.9 10.0 125 604-765 1-128 (229)
103 2zgd_A 3 repeat synthetic anky 99.7 5.7E-17 2E-21 145.1 10.3 90 626-746 20-109 (110)
104 1n0r_A 4ANK, 4 ankyrin repeats 99.7 4.8E-17 1.6E-21 144.2 9.6 106 629-765 1-108 (126)
105 3deo_A Signal recognition part 99.7 7.5E-17 2.5E-21 155.8 9.4 109 626-767 40-152 (183)
106 1bi7_B P16INK4A, MTS1, multipl 99.7 4.6E-17 1.6E-21 153.1 6.3 106 627-765 9-118 (156)
107 3ui2_A Signal recognition part 99.6 2.4E-16 8.1E-21 160.1 8.8 109 626-767 41-153 (244)
108 2l6b_A NR1C; ankyrin, consensu 99.6 1.8E-16 6.2E-21 141.1 6.8 105 587-731 8-112 (115)
109 1n0q_A 3ANK, 3 ankyrin repeats 99.6 1.1E-15 3.6E-20 132.1 10.5 89 589-711 3-91 (93)
110 2aja_A Ankyrin repeat family p 99.6 6E-17 2.1E-21 177.6 2.9 138 589-766 93-233 (376)
111 2b0o_E UPLC1; arfgap, structur 99.6 5.4E-16 1.8E-20 163.9 7.2 107 588-740 190-299 (301)
112 2aja_A Ankyrin repeat family p 99.6 4.4E-16 1.5E-20 170.8 1.1 122 588-754 128-252 (376)
113 1dcq_A PYK2-associated protein 99.5 3.9E-14 1.3E-18 147.9 9.7 111 630-766 130-246 (278)
114 3jue_A Arfgap with coiled-coil 99.5 3.1E-14 1.1E-18 155.8 8.5 106 629-766 198-309 (368)
115 2zgd_A 3 repeat synthetic anky 99.5 1.2E-13 4.1E-18 123.5 9.8 86 588-707 24-109 (110)
116 3lvq_E ARF-GAP with SH3 domain 99.5 1.1E-13 3.6E-18 155.4 9.9 104 587-736 170-276 (497)
117 1wj0_A Squamosa promoter-bindi 99.4 8.7E-14 3E-18 116.6 0.6 31 1-31 30-60 (60)
118 2cxk_A Camta1, calmodulin bind 53.5 59 0.002 29.2 8.7 77 419-511 7-84 (95)
119 1uad_C RSEC5, exocyst complex 36.8 34 0.0012 30.7 4.4 39 418-458 7-46 (99)
120 4hw6_A Hypothetical protein, I 22.2 1.8E+02 0.0061 31.8 7.9 72 416-505 16-90 (433)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.89 E-value=5.6e-23 Score=200.40 Aligned_cols=149 Identities=25% Similarity=0.161 Sum_probs=117.3
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch--
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS-- 663 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~-- 663 (865)
...|+.|+.+|+.++|+.||+.+++.| ..+..|+||||+|+..++.+++++||++|++++. + |..+
T Consensus 5 g~~L~~Aa~~G~~~~v~~Ll~~Gadvn---------~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh 75 (169)
T 4gpm_A 5 GKRLIEAAENGNKDRVKDLIENGADVN---------ASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLH 75 (169)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTT---------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHCCCCCC---------CcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHH
Confidence 457889999999999999998875433 2356789999999999999999999999988773 2 3222
Q ss_pred -----hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcC
Q 002922 664 -----RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRA 738 (865)
Q Consensus 664 -----~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rG 738 (865)
+..++|+.+.. +++++|.+|..|+||||+||..++.+ +|++|++. ||++|.+|.+|+||||+|+.+|
T Consensus 76 ~A~~~g~~~~v~~Ll~-~gadvn~~d~~G~TpLh~A~~~g~~~-~v~~Ll~~------gad~~~~d~~G~TpL~~A~~~g 147 (169)
T 4gpm_A 76 HAAENGHKEVVKLLIS-KGADVNAKDSDGRTPLHHAAENGHKE-VVKLLISK------GADVNTSDSDGRTPLDLAREHG 147 (169)
T ss_dssp HHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHH-HHHHHHHT------TCCTTCCCTTSCCHHHHHHHTT
T ss_pred HHHHcCCHHHHHHHHH-CcCCCCCCCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCccccCCCCCCHHHHHHHcC
Confidence 34445553221 26789999999999999999998766 99999875 4888999999999999999999
Q ss_pred CHHHHHHHHHhhhhcC
Q 002922 739 HHSYIHLVQRKINKKS 754 (865)
Q Consensus 739 n~eiIeLL~~K~~~~~ 754 (865)
+.+++++|++++++.+
T Consensus 148 ~~~iv~~Ll~~GA~ie 163 (169)
T 4gpm_A 148 NEEVVKLLEKQGGWLE 163 (169)
T ss_dssp CHHHHHHHHTC-----
T ss_pred CHHHHHHHHHCCCCcC
Confidence 9999999999998866
No 2
>1ul4_A SPL4, squamosa promoter binding protein-like 4; transcription factor, SBP, flower development, DNA binding protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.72.1.1
Probab=99.88 E-value=1.6e-24 Score=195.52 Aligned_cols=59 Identities=61% Similarity=1.031 Sum_probs=53.0
Q ss_pred CCCCCcEEEECCchhhhhhhccCCcCCccccCcchhHHHHhhhhhhhhccCCCCCCCCC
Q 002922 1 MHSKATKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHPDNVVNG 59 (865)
Q Consensus 1 ~H~~a~~v~~~g~~~RfCQqC~rfh~l~eFd~~krsCr~~L~~h~~rrr~~~~~~~~~~ 59 (865)
.|+||++|+|+|+++||||||+|||+|+|||++|||||+||++||+||||+++++...+
T Consensus 35 ~H~ka~~V~~~G~~~RFCQQCsrFH~L~eFD~~kRSCR~rL~~hn~RRRk~~~~~~~~~ 93 (94)
T 1ul4_A 35 VHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAKRSCRRRLAGHNERRRKSSGESGPSS 93 (94)
T ss_dssp HHHTCSCEEETTEEEEECTTTSSEEETTTCCSSCCSCSTTTTCCCCCCCSCCCC-----
T ss_pred HHhcCCEEEECChhHHHHHHHhccCCHHHhccccchHHHHHHHHHHHhccCCCCcCCCC
Confidence 49999999999999999999999999999999999999999999999999999986543
No 3
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.86 E-value=1.3e-21 Score=180.04 Aligned_cols=123 Identities=24% Similarity=0.189 Sum_probs=108.8
Q ss_pred ccchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhH
Q 002922 587 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQK 666 (865)
Q Consensus 587 R~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k 666 (865)
...++||+|+..|+.++++.||+.+++.+ ..+..|+||||+|+..|+.++|++||++|++
T Consensus 13 ~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----------- 72 (136)
T 2jab_A 13 DLGKKLLEAARAGQDDEVRILMANGADVN---------AKDEYGLTPLYLATAHGHLEIVEVLLKNGAD----------- 72 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHTTCCTT---------CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-----------
T ss_pred cccHHHHHHHHhCCHHHHHHHHHcCCCCC---------CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----------
Confidence 34699999999999999999999875422 2356799999999999999999999999864
Q ss_pred HHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHH
Q 002922 667 QLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLV 746 (865)
Q Consensus 667 ~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL 746 (865)
+|.+|..|.||||+|+..++.+ ++++|++. ++++|.+|.+|+||||+|+.+|+.+++++|
T Consensus 73 -------------~~~~d~~g~t~L~~A~~~~~~~-~v~~Ll~~------g~~~~~~~~~g~tpl~~A~~~~~~~~~~~L 132 (136)
T 2jab_A 73 -------------VNAVDAIGFTPLHLAAFIGHLE-IAEVLLKH------GADVNAQDKFGKTAFDISIGNGNEDLAEIL 132 (136)
T ss_dssp -------------TTCCCTTCCCHHHHHHHHTCHH-HHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred -------------CCcCCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCCcCcCCCCCCHHHHHHHCCCHHHHHHH
Confidence 5778999999999999998776 99999875 478899999999999999999999999999
Q ss_pred HHh
Q 002922 747 QRK 749 (865)
Q Consensus 747 ~~K 749 (865)
+++
T Consensus 133 l~~ 135 (136)
T 2jab_A 133 QKL 135 (136)
T ss_dssp HHC
T ss_pred HHc
Confidence 875
No 4
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.86 E-value=5e-22 Score=182.92 Aligned_cols=125 Identities=22% Similarity=0.185 Sum_probs=110.3
Q ss_pred ccchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhH
Q 002922 587 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQK 666 (865)
Q Consensus 587 R~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k 666 (865)
...++||+|+..|+.++++.||+.+++.+ ..+..|+||||+|+. ++.++|++||++|++
T Consensus 11 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~----------- 69 (136)
T 1d9s_A 11 SSDAGLATAAARGQVETVRQLLEAGADPN---------ALNRFGRRPIQVMMM-GSAQVAELLLLHGAE----------- 69 (136)
T ss_dssp CCSCHHHHHHHTTCHHHHHHHHHTTCCTT---------CCCTTCCTTTTTSTT-SCHHHHHHHHHHTCC-----------
T ss_pred CCccHHHHHHHcCCHHHHHHHHHcCCCcC---------CcCCCCCCHHHHHHc-CCHHHHHHHHHCCCC-----------
Confidence 35699999999999999999999875422 235679999999999 999999999999864
Q ss_pred HHHhhhcCCcccCCcccCCC-CchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHH
Q 002922 667 QLVDRAGSGFIFKPNVIGPA-GLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHL 745 (865)
Q Consensus 667 ~LV~~~s~~y~~d~Na~d~~-G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeL 745 (865)
+|.+|.. |+||||+|+..++.+ ++++|++. ++++|.+|..|+||||+|+.+|+.+++++
T Consensus 70 -------------~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~------ga~~~~~d~~g~tpl~~A~~~~~~~~~~~ 129 (136)
T 1d9s_A 70 -------------PNCADPATLTRPVHDAAREGFLD-TLVVLHRA------GARLDVCDAWGRLPVDLAEEQGHRDIARY 129 (136)
T ss_dssp -------------SSCCBTTTTBCHHHHHHHHTCHH-HHHHHHHT------CCCCCCCSSSSSCHHHHHHHHTCHHHHHH
T ss_pred -------------CCCcCCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCCCccCCCCCCHHHHHHHcCCHHHHHH
Confidence 5778888 999999999998776 99999875 47889999999999999999999999999
Q ss_pred HHHhhhh
Q 002922 746 VQRKINK 752 (865)
Q Consensus 746 L~~K~~~ 752 (865)
|+++.+|
T Consensus 130 Ll~~Gad 136 (136)
T 1d9s_A 130 LHAATGD 136 (136)
T ss_dssp HHHHHCC
T ss_pred HHHcCCC
Confidence 9998764
No 5
>1ul5_A SPL7, squamosa promoter binding protein-like 7; transcription factor, SBP, flower development, DNA binding protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.72.1.1
Probab=99.86 E-value=6e-24 Score=189.79 Aligned_cols=56 Identities=45% Similarity=0.871 Sum_probs=52.7
Q ss_pred CCCCCcEEEECCchhhhhhhccCCcCCccccCcchhHHHHhhhhhhhhccCCCCCC
Q 002922 1 MHSKATKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHPDNV 56 (865)
Q Consensus 1 ~H~~a~~v~~~g~~~RfCQqC~rfh~l~eFd~~krsCr~~L~~h~~rrr~~~~~~~ 56 (865)
.|+||++|+++|+++||||||+|||+|+|||++|||||+||++||+||||+.++.+
T Consensus 30 ~H~ka~~v~~~G~~~RFCQQC~rFH~L~eFD~~kRSCR~rL~~hn~RRR~~~~~~~ 85 (88)
T 1ul5_A 30 RCATASFVVLDGENKRYCQQCGKFHLLPDFDEGKRSCRRKLERHNNRRKRKPVDKG 85 (88)
T ss_dssp HHHHHSEEEETTEEEEECTTTSSEEEGGGBCSSTTSBSSSCCCSSSCCCCCSCSSC
T ss_pred HHcCCCEEEECCEeeHHHHHhccccChhhhccccchHHHHHHHHHHHhccCCccCC
Confidence 48999999999999999999999999999999999999999999999998777653
No 6
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.86 E-value=1.6e-21 Score=196.01 Aligned_cols=166 Identities=23% Similarity=0.126 Sum_probs=111.2
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCC----------
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNV---------- 657 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~---------- 657 (865)
..++||+|+..|+.+++++||+.+++.+. .+..|+||||+|+..|+.++|++|+++|++..
T Consensus 45 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~---------~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~ 115 (282)
T 1oy3_D 45 GQTALHLAAILGEASTVEKLYAAGAGVLV---------AERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQ 115 (282)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCSSC---------CCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCC---------CCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhc
Confidence 46999999999999999999998755332 25679999999999999999999999886521
Q ss_pred -------------------------------------C---CCCch-------hhHHHHhhhcCCcccCCcccCCC-Cch
Q 002922 658 -------------------------------------L---DKPGS-------RQKQLVDRAGSGFIFKPNVIGPA-GLT 689 (865)
Q Consensus 658 -------------------------------------~---dg~~~-------~~k~LV~~~s~~y~~d~Na~d~~-G~T 689 (865)
. .|..+ +..++++.+. .+++++|.++.. |+|
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~~g~t 194 (282)
T 1oy3_D 116 SQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLR-DAGADLNKPEPTCGRT 194 (282)
T ss_dssp ----------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HHTCCTTCCCTTTCCC
T ss_pred ccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCcC
Confidence 0 11111 2233333221 125677777754 888
Q ss_pred HHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh---cCCCCCceEeecCC
Q 002922 690 PLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK---KSSESGRVILDIPG 766 (865)
Q Consensus 690 PLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~~ 766 (865)
|||+|+.+++.+ +|++|++. ||++|.+|..|+||||+|+.+|+.+++++|+++.++ +. .+|.++|+++.
T Consensus 195 pL~~A~~~~~~~-~v~~Ll~~------gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~-~~g~tpl~~a~ 266 (282)
T 1oy3_D 195 PLHLAVEAQAAS-VLELLLKA------GADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDG-GDKLSPCSSSG 266 (282)
T ss_dssp HHHHHHHTTCHH-HHHHHHHT------TCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC------------
T ss_pred HHHHHHHcCCHH-HHHHHHHc------CCCCcccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCC-CcccccccccC
Confidence 888888887665 88888764 477888888888888888888888888888887554 44 67788888776
Q ss_pred Ccccc
Q 002922 767 SIVDW 771 (865)
Q Consensus 767 ~~~~~ 771 (865)
+-.+.
T Consensus 267 ~~~~~ 271 (282)
T 1oy3_D 267 SDSDS 271 (282)
T ss_dssp -----
T ss_pred Ccccc
Confidence 65543
No 7
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.86 E-value=2.1e-21 Score=181.37 Aligned_cols=124 Identities=21% Similarity=0.145 Sum_probs=95.7
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHH
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 667 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~ 667 (865)
+.++|++|+..|..++++.||+.+.+.+ .+..|.||||+|+..|+.++|++|+++|++
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~----------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------ 59 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFT----------TDWLGTSPLHLAAQYGHFSTTEVLLRAGVS------------ 59 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCC----------CCTTCCCHHHHHHHHTCHHHHHHHHTTTCC------------
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCC----------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------
Confidence 3579999999999999999999875321 245689999999999999999999999865
Q ss_pred HHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHH
Q 002922 668 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQ 747 (865)
Q Consensus 668 LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~ 747 (865)
+|.++..|+||||+|+..++.+ ++++|++. ++++|.+|.+|+||||+|+.+|+.+++++|+
T Consensus 60 ------------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 120 (153)
T 1awc_B 60 ------------RDARTKVDRTPLHMAASEGHAN-IVEVLLKH------GADVNAKDMLKMTALHWATEHNHQEVVELLI 120 (153)
T ss_dssp ------------TTCCCTTCCCHHHHHHHHTCHH-HHHHHHTT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred ------------CCCCCCCCCCHHHHHHHcChHH-HHHHHHHc------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 4566667777777777776655 77777653 3666777777777777777777777777777
Q ss_pred Hhhhh
Q 002922 748 RKINK 752 (865)
Q Consensus 748 ~K~~~ 752 (865)
++..+
T Consensus 121 ~~ga~ 125 (153)
T 1awc_B 121 KYGAD 125 (153)
T ss_dssp HTTCC
T ss_pred HcCCC
Confidence 76443
No 8
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.85 E-value=5.3e-21 Score=169.74 Aligned_cols=124 Identities=29% Similarity=0.263 Sum_probs=109.3
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHH
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 668 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~L 668 (865)
+++||+|+..|+.++++.|++.+++.+ ..+..|.||||+|+..++.+++++|+++|++
T Consensus 3 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~---------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------------- 60 (126)
T 1n0r_A 3 RTPLHLAARNGHLEVVKLLLEAGADVN---------AKDKNGRTPLHLAARNGHLEVVKLLLEAGAD------------- 60 (126)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTCCTT---------CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-------------
T ss_pred ccHHHHHHHcCcHHHHHHHHHcCCCCC---------CcCCCCCcHHHHHHHcCcHHHHHHHHHcCCC-------------
Confidence 589999999999999999999875422 2255799999999999999999999999864
Q ss_pred HhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002922 669 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQR 748 (865)
Q Consensus 669 V~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~ 748 (865)
++.+|..|.||||+|+..++.+ ++++|++. +++++.+|..|.||||+|+..|+.+++++|++
T Consensus 61 -----------~~~~~~~g~t~l~~A~~~~~~~-~~~~Ll~~------g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~ 122 (126)
T 1n0r_A 61 -----------VNAKDKNGRTPLHLAARNGHLE-VVKLLLEA------GADVNAKDKNGRTPLHLAARNGHLEVVKLLLE 122 (126)
T ss_dssp -----------TTCCCTTSCCHHHHHHHTTCHH-HHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred -----------CcccCCCCCcHHHHHHHcChHH-HHHHHHHc------CCCCcccCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence 5778889999999999998776 99999875 47789999999999999999999999999999
Q ss_pred hhhh
Q 002922 749 KINK 752 (865)
Q Consensus 749 K~~~ 752 (865)
+.++
T Consensus 123 ~Gad 126 (126)
T 1n0r_A 123 AGAY 126 (126)
T ss_dssp HTCC
T ss_pred cCCC
Confidence 8764
No 9
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.85 E-value=3.9e-21 Score=193.18 Aligned_cols=165 Identities=22% Similarity=0.149 Sum_probs=128.7
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch-
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS- 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~- 663 (865)
.+++||+|+..|+.+++++||+.+++.+. .+..+..|+||||+|+..|+.++|++||++|++++. + |..+
T Consensus 9 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL 82 (282)
T 1oy3_D 9 GDTALHLAVIHQHEPFLDFLLGFSAGHEY------LDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTAL 82 (282)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHHHTTSGG------GGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCccc------ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHH
Confidence 46999999999999999999998865321 122356799999999999999999999999998773 2 2221
Q ss_pred ------hhHHHHhhhcC----------------------------------------------CcccCCcccCCCCchHH
Q 002922 664 ------RQKQLVDRAGS----------------------------------------------GFIFKPNVIGPAGLTPL 691 (865)
Q Consensus 664 ------~~k~LV~~~s~----------------------------------------------~y~~d~Na~d~~G~TPL 691 (865)
+...+++.... .+.+++|.++..|.|||
T Consensus 83 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L 162 (282)
T 1oy3_D 83 HLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPL 162 (282)
T ss_dssp HHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHH
T ss_pred HHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHH
Confidence 23333332211 12345888999999999
Q ss_pred HHHHhcCChHHHHHHhhcCCCCCCccccccccCCC-CCCHHHHHHHcCCHHHHHHHHHhhhh---cCCCCCceEeecCC
Q 002922 692 HVAACRDDAENVLDALTDDPGSVGIEAWKSAQDST-GLTPNDYASLRAHHSYIHLVQRKINK---KSSESGRVILDIPG 766 (865)
Q Consensus 692 HlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~-G~TPLHyAa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~~ 766 (865)
|+|+..++.+ +|++|++. ++++|.+|.. |+||||+|+.+|+.+++++|+++.++ +. .+|.++|+++-
T Consensus 163 ~~A~~~g~~~-~v~~Ll~~------g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d-~~g~tpL~~A~ 233 (282)
T 1oy3_D 163 HVAVIHKDAE-MVRLLRDA------GADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARM-YGGRTPLGSAL 233 (282)
T ss_dssp HHHHHTTCHH-HHHHHHHH------TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHH
T ss_pred HHHHHcCCHH-HHHHHHHc------CCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccc-cCCCCHHHHHH
Confidence 9999998766 99999874 5788999865 99999999999999999999998654 33 56788888764
No 10
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.85 E-value=4.1e-21 Score=196.01 Aligned_cols=163 Identities=18% Similarity=0.096 Sum_probs=126.1
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch-
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS- 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~- 663 (865)
..++||+|+..|+.+++++||+.+++.+ ..+..|.||||+|+..|+.++|++||++|++++. + |..+
T Consensus 73 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~---------~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l 143 (299)
T 1s70_B 73 GLTALHQACIDDNVDMVKFLVENGANIN---------QPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPL 143 (299)
T ss_dssp CCBHHHHHHHTTCHHHHHHHHHTTCCTT---------CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCC---------CCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHH
Confidence 4699999999999999999999875432 2255799999999999999999999999998763 2 2221
Q ss_pred ------hhHHHHhhhcCCcc--------------------------cCCcccCCCCchHHHHHHhcCChHHHHHHhhcCC
Q 002922 664 ------RQKQLVDRAGSGFI--------------------------FKPNVIGPAGLTPLHVAACRDDAENVLDALTDDP 711 (865)
Q Consensus 664 ------~~k~LV~~~s~~y~--------------------------~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp 711 (865)
....++......++ ......+..|.||||+||.+++.+ +|++|++.
T Consensus 144 ~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~-~v~~Ll~~- 221 (299)
T 1s70_B 144 DIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTE-VLKLLIQA- 221 (299)
T ss_dssp HHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHH-HHHHHHTT-
T ss_pred HHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHH-HHHHHHHc-
Confidence 22222221100011 122345678999999999998776 99999874
Q ss_pred CCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh---cCCCCCceEeecCCC
Q 002922 712 GSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK---KSSESGRVILDIPGS 767 (865)
Q Consensus 712 ~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~~~ 767 (865)
++++|.+|.+|+||||+|+.+|+.+++++|+++.++ +. ..|+++|+++..
T Consensus 222 -----g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d-~~g~t~l~~A~~ 274 (299)
T 1s70_B 222 -----RYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVN-KVGQTAFDVADE 274 (299)
T ss_dssp -----TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCTTTSCCS
T ss_pred -----CCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcC-CCCCCHHHHHHH
Confidence 488999999999999999999999999999998665 34 578899999854
No 11
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.85 E-value=2.8e-21 Score=200.26 Aligned_cols=161 Identities=19% Similarity=0.086 Sum_probs=95.0
Q ss_pred chHHHHHHHCCCH-HHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC---CCCch-
Q 002922 589 KWLLEFSMEHDWC-AVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL---DKPGS- 663 (865)
Q Consensus 589 ~tLL~fAverg~~-aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~---dg~~~- 663 (865)
.++|++|+..+.. .++++|++.+++.|. .+..|+||||+|++.|+.++|++||++|++++. ++..+
T Consensus 53 ~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~---------~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l 123 (269)
T 4b93_B 53 CHPLCQCPKCAPAQKRLAKVPASGLGVNV---------TSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPL 123 (269)
T ss_dssp ----------------------CCCCTTC---------CCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHH
T ss_pred CCHHHHHHHhCCHHHHHHHHHHCCCCCCC---------cCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCcc
Confidence 3455555544432 344555554432211 133455555555555555555555555554442 11111
Q ss_pred ------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHc
Q 002922 664 ------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLR 737 (865)
Q Consensus 664 ------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~r 737 (865)
....+++.+. .+++++|.+|..|+||||+||..++.+ +|++|++. ||++|.+|..|+||||+|+.+
T Consensus 124 ~~a~~~~~~~~~~~Ll-~~g~~~n~~d~~g~TpL~~A~~~g~~~-~v~~Ll~~------gadvn~~~~~g~t~Lh~A~~~ 195 (269)
T 4b93_B 124 HLACQQGHFQVVKCLL-DSNAKPNKKDLSGNTPLIYACSGGHHE-LVALLLQH------GASINASNNKGNTALHEAVIE 195 (269)
T ss_dssp HHHHHHTCHHHHHHHH-HTTCCSCCCCTTCCCHHHHHHHTTCGG-GHHHHHHT------TCCTTCBCTTSCBHHHHHHHT
T ss_pred ccccccChHHHHHHHH-HCCCCCCCCCCCCCCHHHHHHHCCCHH-HHHHHHHC------CCCCCccccCCCcHHHHHHHc
Confidence 1122222111 113468899999999999999998877 99999875 588999999999999999999
Q ss_pred CCHHHHHHHHHhhhh---cCCCCCceEeecCCC
Q 002922 738 AHHSYIHLVQRKINK---KSSESGRVILDIPGS 767 (865)
Q Consensus 738 Gn~eiIeLL~~K~~~---~~~~~~~v~l~i~~~ 767 (865)
|+.++|++|+++.++ +. .+|.|+|+++..
T Consensus 196 g~~~~v~~Ll~~Gad~~~~d-~~G~TpL~~A~~ 227 (269)
T 4b93_B 196 KHVFVVELLLLHGASVQVLN-KRQRTAVDCAEQ 227 (269)
T ss_dssp TCHHHHHHHHHTTCCSCCCC-TTSCCSGGGSCT
T ss_pred CCHHHHHHHHHCCCCCCCcC-CCCCCHHHHHHh
Confidence 999999999998665 44 678999999853
No 12
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.85 E-value=8.8e-21 Score=179.64 Aligned_cols=127 Identities=24% Similarity=0.149 Sum_probs=108.5
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHH
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 667 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~ 667 (865)
..++||+|+..|+.+++++||+.+++.+. .+..|.||||+|+..|+.++|++||++|++
T Consensus 36 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~---------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------ 94 (172)
T 3v30_A 36 GFTPLIWASAFGEIETVRFLLEWGADPHI---------LAKERESALSLASTGGYTDIVGLLLERDVD------------ 94 (172)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHTCCTTC---------CCTTCCCHHHHHHHTTCHHHHHHHHTTTCC------------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCchh---------hcccCCCHHHHHHHCCCHHHHHHHHHcCCC------------
Confidence 45889999999999999999988754322 245688999999999999999999988754
Q ss_pred HHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHH
Q 002922 668 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQ 747 (865)
Q Consensus 668 LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~ 747 (865)
+|.+|..|+||||+|+..++.+ ++++|++. +++++.+|..|+||||+|+.+|+.+++++|.
T Consensus 95 ------------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~------ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~ 155 (172)
T 3v30_A 95 ------------INIYDWNGGTPLLYAVRGNHVK-CVEALLAR------GADLTTEADSGYTPMDLAVALGYRKVQQVIE 155 (172)
T ss_dssp ------------TTCCCTTSCCHHHHHHHTTCHH-HHHHHHHT------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred ------------CCCCCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCccccCCCCCCHHHHHHHhCcHHHHHHHH
Confidence 6788999999999999998776 99999875 4788999999999999999999999999999
Q ss_pred HhhhhcC
Q 002922 748 RKINKKS 754 (865)
Q Consensus 748 ~K~~~~~ 754 (865)
++..+..
T Consensus 156 ~~~~~~~ 162 (172)
T 3v30_A 156 NHILKLF 162 (172)
T ss_dssp HHHHHHS
T ss_pred HHHHHHh
Confidence 9977644
No 13
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.85 E-value=1.2e-20 Score=184.76 Aligned_cols=164 Identities=16% Similarity=0.056 Sum_probs=130.5
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchH-HhhccccHHHHHHHcCCHHHHHHHHhcC--CCCCC-C--CC
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSE-LAILEMGLLHKAVRRNCRPMVELLLNYA--PDNVL-D--KP 661 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~-~~~~G~TpLH~AV~~gn~eIVELLL~~G--adi~~-d--g~ 661 (865)
.+++||+|+..|+.++++.|++.+.+.+++ . .+..|+||||+|+..|+.+++++|+++| ++++. + +.
T Consensus 36 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~-------~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~ 108 (228)
T 2dzn_A 36 GRIPLHWSVSFQAHEITSFLLSKMENVNLD-------DYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGV 108 (228)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTCTTCCGG-------GCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCC
T ss_pred CCCHHHHHHHcCCHHHHHHHHhcccccccc-------ccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCC
Confidence 469999999999999999999987554432 2 3567999999999999999999999998 66552 2 32
Q ss_pred ch-------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHH
Q 002922 662 GS-------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYA 734 (865)
Q Consensus 662 ~~-------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyA 734 (865)
.+ +..++++.... +++++|.+|..|+||||+|+..++.+ ++++|++.+ .+++|.+|.+|+||||+|
T Consensus 109 t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~g-----~~~~~~~d~~g~t~L~~A 181 (228)
T 2dzn_A 109 TCLHLAVGKKWFEVSQFLIE-NGASVRIKDKFNQIPLHRAASVGSLK-LIELLCGLG-----KSAVNWQDKQGWTPLFHA 181 (228)
T ss_dssp CHHHHHHHTTCHHHHHHHHH-TTCCSCCCCTTSCCHHHHHHHTTCHH-HHHHHHTTT-----CCCSCCCCTTSCCHHHHH
T ss_pred CHHHHHHHcCCHhHHHHHHH-cCCCccccCCCCCCHHHHHHHcCCHH-HHHHHHhcC-----cccccCcCCCCCCHHHHH
Confidence 22 33444553221 26789999999999999999998776 999998753 278899999999999999
Q ss_pred HHcCCHHHHHHHH-Hhhhh---cCCCCCceEeecCC
Q 002922 735 SLRAHHSYIHLVQ-RKINK---KSSESGRVILDIPG 766 (865)
Q Consensus 735 a~rGn~eiIeLL~-~K~~~---~~~~~~~v~l~i~~ 766 (865)
+.+|+.+++++|+ ++.++ +. .+|.++++++.
T Consensus 182 ~~~~~~~~v~~Ll~~~ga~~~~~~-~~g~t~l~~A~ 216 (228)
T 2dzn_A 182 LAEGHGDAAVLLVEKYGAEYDLVD-NKGAKAEDVAL 216 (228)
T ss_dssp HHTTCHHHHHHHHHHHCCCSCCBC-TTSCBGGGGCS
T ss_pred HHcCCHHHHHHHHHhcCCCCCccC-CCCCcHHHHHH
Confidence 9999999999999 66554 34 57888888874
No 14
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.85 E-value=2e-21 Score=181.50 Aligned_cols=147 Identities=18% Similarity=0.086 Sum_probs=89.1
Q ss_pred ccchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch
Q 002922 587 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS 663 (865)
Q Consensus 587 R~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~ 663 (865)
++.++||+|+.+|..++++.||+.+++.+ ..+..|.||||+|+. |+.++|++||++|++++. + +..+
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~---------~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~ 73 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNVN---------AQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAV 73 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCTT---------CCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCcc---------ccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCH
Confidence 45689999999999999999998764322 235578999999999 999999999999876542 1 1111
Q ss_pred -------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCcccc-ccccCCCCCCHHHHHH
Q 002922 664 -------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAW-KSAQDSTGLTPNDYAS 735 (865)
Q Consensus 664 -------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~-VNakD~~G~TPLHyAa 735 (865)
+..++++.... +++++|.+|..|+||||+|+..++.+ ++++|++.+ ++ ++.+|..|+||||+|+
T Consensus 74 L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~g------~~~~~~~~~~g~t~l~~A~ 145 (162)
T 1ihb_A 74 IHDAARAGFLDTLQTLLE-FQADVNIEDNEGNLPLHLAAKEGHLR-VVEFLVKHT------ASNVGHRNHKGDTACDLAR 145 (162)
T ss_dssp HHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHH-HHHHHHHHS------CCCTTCCCTTSCCHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCCHH-HHHHHHHcc------CCCCCCcCCCCCcHHHHHH
Confidence 12222221111 13445555555555555555554443 555554432 32 3555555555555555
Q ss_pred HcCCHHHHHHHHHhhh
Q 002922 736 LRAHHSYIHLVQRKIN 751 (865)
Q Consensus 736 ~rGn~eiIeLL~~K~~ 751 (865)
.+|+.+++++|+++.+
T Consensus 146 ~~~~~~~~~~Ll~~GA 161 (162)
T 1ihb_A 146 LYGRNEVVSLMQANGA 161 (162)
T ss_dssp HTTCHHHHHHHHHTC-
T ss_pred HcCCHHHHHHHHHhCC
Confidence 5555555555555543
No 15
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.85 E-value=3.4e-21 Score=185.95 Aligned_cols=145 Identities=21% Similarity=0.088 Sum_probs=100.6
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch-
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS- 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~- 663 (865)
.+++||+|+..|+.++++.||+.+++.+ ..+..|.||||+|+..|+.++|++|+++|++++. + +..+
T Consensus 35 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 105 (192)
T 2rfm_A 35 NRTPLMVACMLGMENAIDKLVENFDKLE---------DKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPL 105 (192)
T ss_dssp CCCHHHHHHHHTCGGGHHHHHHHHCCTT---------CCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhccccc---------cccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHH
Confidence 4589999999999999999999875422 2255699999999999999999999999987652 1 2211
Q ss_pred ------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHc
Q 002922 664 ------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLR 737 (865)
Q Consensus 664 ------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~r 737 (865)
+..++++.+.. +++++|.+|..|.||||+|+..++.+ ++++|++. +++++.+|..|.||||+|+.+
T Consensus 106 ~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~------ga~~~~~~~~g~t~l~~A~~~ 177 (192)
T 2rfm_A 106 MWSIIFGYSEMSYFLLE-HGANVNDRNLEGETPLIVASKYGRSE-IVKKLLEL------GADISARDLTGLTAEASARIF 177 (192)
T ss_dssp HHHHHHTCHHHHHHHHH-TTCCSSCCCTTCCCHHHHHHHHTCHH-HHHHHHHT------TCCTTCBCTTSCBHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHcCCHH-HHHHHHHC------CCCCCCcCCCCCCHHHHHHHh
Confidence 22333332211 24566667777777777777666554 67766553 356667777777777777777
Q ss_pred CCHHHHHHHHHh
Q 002922 738 AHHSYIHLVQRK 749 (865)
Q Consensus 738 Gn~eiIeLL~~K 749 (865)
|+.+++++|.++
T Consensus 178 ~~~~~v~~Ll~~ 189 (192)
T 2rfm_A 178 GRQEVIKIFTEV 189 (192)
T ss_dssp TCHHHHHHHHHH
T ss_pred CcHHHHHHHHhc
Confidence 777777766654
No 16
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.85 E-value=6.1e-21 Score=181.43 Aligned_cols=123 Identities=24% Similarity=0.213 Sum_probs=87.1
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHH
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 668 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~L 668 (865)
.++|++|+..|..++++.||+.+++.+ ..+..|.||||+|+..|+.++|++||++|+++
T Consensus 15 ~~~l~~A~~~g~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~------------ 73 (169)
T 2y1l_E 15 GKKLLEAARAGRDDEVRILMANGADVN---------AEDASGWTPLHLAAFNGHLEIVEVLLKNGADV------------ 73 (169)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCTT---------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT------------
T ss_pred cchHHHHHHcCCHHHHHHHHHCCCCCC---------CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC------------
Confidence 589999999999999999999875422 23567999999999999999999999998764
Q ss_pred HhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002922 669 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQR 748 (865)
Q Consensus 669 V~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~ 748 (865)
|.+|..|+||||+|+..++.+ ++++|++. ++++|.+|.+|.||||+|+.+|+.+++++|++
T Consensus 74 ------------~~~~~~g~t~L~~A~~~~~~~-~~~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 134 (169)
T 2y1l_E 74 ------------NAVDHAGMTPLRLAALFGHLE-IVEVLLKN------GADVNANDMEGHTPLHLAAMFGHLEIVEVLLK 134 (169)
T ss_dssp ------------TCCCTTSCCHHHHHHHTTCHH-HHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred ------------CccCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 445555666666666555444 55655543 24555556666666666666666666665555
Q ss_pred hhh
Q 002922 749 KIN 751 (865)
Q Consensus 749 K~~ 751 (865)
+..
T Consensus 135 ~g~ 137 (169)
T 2y1l_E 135 NGA 137 (169)
T ss_dssp TTC
T ss_pred cCC
Confidence 533
No 17
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.84 E-value=7.6e-21 Score=178.89 Aligned_cols=138 Identities=24% Similarity=0.200 Sum_probs=116.2
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHH
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 668 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~L 668 (865)
.++|+.|+..|..++++.||+... .+....+..|+||||+|+..|+.++|++||++|++
T Consensus 9 ~~~l~~A~~~g~~~~v~~ll~~~~--------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------- 67 (165)
T 3twr_A 9 DRQLLEAAKAGDVETVKKLCTVQS--------VNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGAD------------- 67 (165)
T ss_dssp HHHHHHHHHHTCHHHHHHHCCTTT--------TTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-------------
T ss_pred hHHHHHHHHhCCHHHHHHHHHcCC--------CCccccccCCCCHHHHHHHcChHHHHHHHHhcCCC-------------
Confidence 489999999999999999997531 12223355689999999999999999999999864
Q ss_pred HhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002922 669 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQR 748 (865)
Q Consensus 669 V~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~ 748 (865)
+|.+|..|+||||+|+..++.+ ++++|++. ++++|.+|..|+||||+|+.+|+.+++++|++
T Consensus 68 -----------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 129 (165)
T 3twr_A 68 -----------VHAKDKGGLVPLHNACSYGHYE-VAELLVKH------GAVVNVADLWKFTPLHEAAAKGKYEICKLLLQ 129 (165)
T ss_dssp -----------TTCCCTTSCCHHHHHHHTTCHH-HHHHHHHT------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred -----------CCccCCCCCCHHHHHHHcCcHH-HHHHHHhC------CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 5778899999999999998776 99999875 47889999999999999999999999999998
Q ss_pred hhhh---cCCCCCceEeecCC
Q 002922 749 KINK---KSSESGRVILDIPG 766 (865)
Q Consensus 749 K~~~---~~~~~~~v~l~i~~ 766 (865)
+..+ +. .+|.++|+++.
T Consensus 130 ~ga~~~~~~-~~g~t~l~~a~ 149 (165)
T 3twr_A 130 HGADPTKKN-RDGNTPLDLVK 149 (165)
T ss_dssp TTCCTTCCC-TTSCCTGGGSC
T ss_pred cCCCCcccC-CCCCChhHhHh
Confidence 8554 33 56777777753
No 18
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.84 E-value=7.1e-21 Score=192.21 Aligned_cols=161 Identities=17% Similarity=0.149 Sum_probs=126.8
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCC-CCCC---CCCch
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAP-DNVL---DKPGS 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Ga-di~~---dg~~~ 663 (865)
..++||+|+..|+.+++++||+.+++.+ ..+..|+||||+|+..|+.++|++|+++++ +++. ++..+
T Consensus 57 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~ 127 (253)
T 1yyh_A 57 GETALHLAARYSRSDAAKRLLEASADAN---------IQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTP 127 (253)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCTT---------CCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCC---------CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcH
Confidence 4689999999999999999999875433 235679999999999999999999999987 5442 23222
Q ss_pred -------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHH
Q 002922 664 -------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASL 736 (865)
Q Consensus 664 -------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~ 736 (865)
+...+++.... +++++|.+|..|+||||+|+..++.+ ++++|++. ||++|.+|..|+||||+|+.
T Consensus 128 L~~A~~~~~~~~v~~Ll~-~g~~~~~~d~~g~t~L~~A~~~~~~~-~v~~Ll~~------ga~~~~~~~~g~tpL~~A~~ 199 (253)
T 1yyh_A 128 LILAARLAVEGMLEDLIN-SHADVNAVDDLGKSALHWAAAVNNVD-AAVVLLKN------GANKDMQNNREETPLFLAAR 199 (253)
T ss_dssp HHHHHHHTCSSHHHHHHH-TTCCTTCBCTTSCBHHHHHHHHTCHH-HHHHHHHT------TCCTTCCCTTSCCHHHHHHH
T ss_pred HHHHHHcChHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCCCCcCCCCCCHHHHHHH
Confidence 22334442221 26789999999999999999998776 99999875 47889999999999999999
Q ss_pred cCCHHHHHHHHHhhhhcC--CCCCceEeecC
Q 002922 737 RAHHSYIHLVQRKINKKS--SESGRVILDIP 765 (865)
Q Consensus 737 rGn~eiIeLL~~K~~~~~--~~~~~v~l~i~ 765 (865)
+|+.+++++|+++.++.. ...|.++++++
T Consensus 200 ~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A 230 (253)
T 1yyh_A 200 EGSYETAKVLLDHFANRDITDHMDRLPRDIA 230 (253)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred CCCHHHHHHHHHcCCCccccccCCCCHHHHH
Confidence 999999999999866522 14566666664
No 19
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.84 E-value=1.3e-20 Score=194.33 Aligned_cols=162 Identities=23% Similarity=0.161 Sum_probs=121.6
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CC---
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KP--- 661 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~--- 661 (865)
..++||+|+..|+.+++++||+.+++.+ ..+..|.||||+|+.+|+.++|++||++|++.+. + +.
T Consensus 91 g~t~L~~A~~~g~~~iv~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l 161 (351)
T 3utm_A 91 GLVPLHNACSYGHYEVTELLLKHGACVN---------AMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAV 161 (351)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTT---------CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CCcHHHHHHHCCCHHHHHHHHHCCCCCC---------CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcch
Confidence 3578888888888888888887764322 2245688999999999999999999999887542 1 10
Q ss_pred ---------------------------------------------------ch----------hhHHHHhhhcCCcccCC
Q 002922 662 ---------------------------------------------------GS----------RQKQLVDRAGSGFIFKP 680 (865)
Q Consensus 662 ---------------------------------------------------~~----------~~k~LV~~~s~~y~~d~ 680 (865)
.+ +..++++.... .++++
T Consensus 162 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~-~g~~~ 240 (351)
T 3utm_A 162 DMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLR-KGANV 240 (351)
T ss_dssp HHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHH-TTCCT
T ss_pred HHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHH-cCCCc
Confidence 00 12334442221 25788
Q ss_pred cccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh---cCCCC
Q 002922 681 NVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK---KSSES 757 (865)
Q Consensus 681 Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~---~~~~~ 757 (865)
|.+|..|+||||+|+.+++.+ ++++|++. |+++|.+|..|+||||+|+.+|+.+++++|+++.++ +. .+
T Consensus 241 ~~~~~~g~t~L~~A~~~g~~~-~v~~Ll~~------ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~-~~ 312 (351)
T 3utm_A 241 NEKNKDFMTPLHVAAERAHND-VMEVLHKH------GAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIIS-LQ 312 (351)
T ss_dssp TCCCTTCCCHHHHHHHTTCHH-HHHHHHHT------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC-TT
T ss_pred CCcCCCCCCHHHHHHHcCCHH-HHHHHHHC------CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcC-CC
Confidence 999999999999999998776 99999875 478899999999999999999999999999998665 33 46
Q ss_pred CceEeecCCC
Q 002922 758 GRVILDIPGS 767 (865)
Q Consensus 758 ~~v~l~i~~~ 767 (865)
|.++++++..
T Consensus 313 g~tal~~a~~ 322 (351)
T 3utm_A 313 GFTAAQMGNE 322 (351)
T ss_dssp SCCHHHHSCH
T ss_pred CCChhhhhhH
Confidence 7777777644
No 20
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.84 E-value=5.6e-21 Score=180.12 Aligned_cols=150 Identities=15% Similarity=0.054 Sum_probs=117.1
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch-
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS- 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~- 663 (865)
..++||+|+..|..++++.||+.+.+ ++ ..+..|+||||+|+..|+.++|++|+++|++++. + +..+
T Consensus 3 ~~t~L~~A~~~g~~~~v~~ll~~~~~--~~-------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 73 (167)
T 3v31_A 3 NSLSVHQLAAQGEMLYLATRIEQENV--IN-------HTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESAL 73 (167)
T ss_dssp TCCCHHHHHHTTCHHHHHHHHHHSSC--TT-------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHH
T ss_pred CcchHHHHHHCCCHHHHHHHHHcCCC--cC-------CCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHH
Confidence 35899999999999999999988643 22 2355799999999999999999999999988763 2 2221
Q ss_pred ------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHc
Q 002922 664 ------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLR 737 (865)
Q Consensus 664 ------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~r 737 (865)
+..++++... .+++++|.+|..|.||||+|+..++.+ ++++|++. +++++.+|.+|+||||+|+.+
T Consensus 74 ~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~------g~~~~~~~~~g~t~l~~A~~~ 145 (167)
T 3v31_A 74 SLACSKGYTDIVKMLL-DCGVDVNEYDWNGGTPLLYAVHGNHVK-CVKMLLES------GADPTIETDSGYNSMDLAVAL 145 (167)
T ss_dssp HHHHHHTCHHHHHHHH-HHTCCTTCCCTTSCCHHHHHHHTTCHH-HHHHHHHT------TCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHH-HCCCCCCcCCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCCCCcCCCCCCHHHHHHHc
Confidence 2334444221 125678889999999999999987766 89999774 477889999999999999999
Q ss_pred CCHHHHHHHHHhhhhcC
Q 002922 738 AHHSYIHLVQRKINKKS 754 (865)
Q Consensus 738 Gn~eiIeLL~~K~~~~~ 754 (865)
|+.+++++|.++..+..
T Consensus 146 ~~~~~~~~L~~~~~~~~ 162 (167)
T 3v31_A 146 GYRSVQQVIESHLLKLL 162 (167)
T ss_dssp TCHHHHHHHHHHHHHHC
T ss_pred CcHHHHHHHHHHHHHHH
Confidence 99999999998876643
No 21
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.84 E-value=1.3e-20 Score=185.37 Aligned_cols=161 Identities=15% Similarity=0.082 Sum_probs=128.0
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch-
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS- 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~- 663 (865)
..++||+|+..|+.++++.|++.+++.+ ..+..|.||||+|+..|+.++|++|+++|++++. + +..+
T Consensus 40 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 110 (231)
T 3aji_A 40 SRTALHWACSAGHTEIVEFLLQLGVPVN---------DKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPL 110 (231)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCSC---------CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CCCHHHHHHHcCcHHHHHHHHHhCCCCC---------CcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHH
Confidence 4689999999999999999999875422 2356799999999999999999999999998763 2 2222
Q ss_pred ------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHc
Q 002922 664 ------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLR 737 (865)
Q Consensus 664 ------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~r 737 (865)
+..++++.... .+++++.++..|.||||+|+..++.+ ++++|++. ++++|.+|..|+||||+|+.+
T Consensus 111 ~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~ 182 (231)
T 3aji_A 111 HYAASKNRHEIAVMLLE-GGANPDAKDHYDATAMHRAAAKGNLK-MVHILLFY------KASTNIQDTEGNTPLHLACDE 182 (231)
T ss_dssp HHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHH-HHHHHHHT------TCCSCCCCTTSCCHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCcHHHHHHHcCCHH-HHHHHHhc------CCCccccCCCCCCHHHHHHHC
Confidence 23344442221 25688999999999999999998776 99999875 478899999999999999999
Q ss_pred CCHHHHHHHHHhhhhcC--CCCCceEeecC
Q 002922 738 AHHSYIHLVQRKINKKS--SESGRVILDIP 765 (865)
Q Consensus 738 Gn~eiIeLL~~K~~~~~--~~~~~v~l~i~ 765 (865)
|+.+++++|+++.++.. ..+|.++++++
T Consensus 183 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A 212 (231)
T 3aji_A 183 ERVEEAKFLVTQGASIYIENKEEKTPLQVA 212 (231)
T ss_dssp TCHHHHHHHHHTTCCSCCCCTTSCCHHHHS
T ss_pred CCHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence 99999999999866522 14566777665
No 22
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.84 E-value=2.3e-20 Score=184.16 Aligned_cols=161 Identities=14% Similarity=0.067 Sum_probs=113.0
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCC--------
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLD-------- 659 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~d-------- 659 (865)
..++||+|+..|+.+++++||+.+++.... .....+..|.||||+|+.+|+.++|++||++|++++..
T Consensus 37 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~----~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~ 112 (232)
T 2rfa_A 37 GETALHIAALYDNLEAAMVLMEAAPELVFE----PMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHY 112 (232)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHCGGGGGC----CCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCchhccc----cccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceee
Confidence 469999999999999999999987552110 11233567999999999999999999999999987631
Q ss_pred --------CCch-------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHH----HHhhcCCCCCCccccc
Q 002922 660 --------KPGS-------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVL----DALTDDPGSVGIEAWK 720 (865)
Q Consensus 660 --------g~~~-------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IV----elLL~dp~~Ig~gA~V 720 (865)
+..+ +..++++.+.. +++++|.+|..|+||||+|+..++.+ ++ ++|++.++.+......
T Consensus 113 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~t~L~~A~~~~~~~-~~~~i~~~Ll~~g~~~~~~~~~ 190 (232)
T 2rfa_A 113 RPHNLIYYGEHPLSFAACVGSEEIVRLLIE-HGADIRAQDSLGNTVLHILILQPNKT-FACQMYNLLLSYDGGDHLKSLE 190 (232)
T ss_dssp CTTCSCCCCSSHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHTCSCHH-HHHHHHHHHHHTTCSCSSCCGG
T ss_pred cccccccCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHcCChH-HHHHHHHHHHhcCCchhhhhhh
Confidence 2221 23344443221 25678888888888888888877655 55 7777654221111111
Q ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHhhhhcC
Q 002922 721 SAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKS 754 (865)
Q Consensus 721 NakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~~~ 754 (865)
|.+|..|+||||+|+.+|+.+++++|+++.....
T Consensus 191 ~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~~~ 224 (232)
T 2rfa_A 191 LVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHIA 224 (232)
T ss_dssp GCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHC-
T ss_pred ccCCCCCCCHHHHHHHcCCHHHHHHHHhcCccch
Confidence 5788888888888888888888888888766543
No 23
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.84 E-value=5e-21 Score=181.34 Aligned_cols=138 Identities=16% Similarity=0.122 Sum_probs=114.0
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHH
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 668 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~L 668 (865)
+++||+|+..|..++++.||+.+.. ..+..+..|+||||+|+..|+.++|++||++|++
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~--------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------- 61 (172)
T 3v30_A 3 SLSIHQLAAQGELDQLKEHLRKGDN--------LVNKPDERGFTPLIWASAFGEIETVRFLLEWGAD------------- 61 (172)
T ss_dssp -CCHHHHHHTTCHHHHHHHHTTCSG--------GGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-------------
T ss_pred hhhHHHHHHcCCHHHHHHHHHcCcc--------cccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-------------
Confidence 3689999999999999999987532 1122356799999999999999999999999864
Q ss_pred HhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002922 669 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQR 748 (865)
Q Consensus 669 V~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~ 748 (865)
+|.+|..|+||||+|+..++.+ ++++|++. ++++|.+|..|+||||+|+.+|+.+++++|++
T Consensus 62 -----------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 123 (172)
T 3v30_A 62 -----------PHILAKERESALSLASTGGYTD-IVGLLLER------DVDINIYDWNGGTPLLYAVRGNHVKCVEALLA 123 (172)
T ss_dssp -----------TTCCCTTCCCHHHHHHHTTCHH-HHHHHHTT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred -----------chhhcccCCCHHHHHHHCCCHH-HHHHHHHc------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 5778899999999999998776 99999875 47889999999999999999999999999999
Q ss_pred hhhhcC--CCCCceEeecC
Q 002922 749 KINKKS--SESGRVILDIP 765 (865)
Q Consensus 749 K~~~~~--~~~~~v~l~i~ 765 (865)
+..+.. ..+|.++|+++
T Consensus 124 ~ga~~~~~~~~g~t~l~~A 142 (172)
T 3v30_A 124 RGADLTTEADSGYTPMDLA 142 (172)
T ss_dssp TTCCTTCCCTTSCCHHHHH
T ss_pred cCCCccccCCCCCCHHHHH
Confidence 865422 03455555554
No 24
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.84 E-value=6.7e-21 Score=177.95 Aligned_cols=112 Identities=14% Similarity=0.061 Sum_probs=85.9
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch-
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS- 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~- 663 (865)
.+++||+|+. |+.+++++||+.+++.+ ..+..|.||||+|+++|+.++|++||++|++++. + |..+
T Consensus 38 g~t~L~~A~~-~~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 107 (162)
T 1ihb_A 38 GRTALQVMKL-GNPEIARRLLLRGANPD---------LKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPL 107 (162)
T ss_dssp SCCHHHHCCS-SCHHHHHHHHHTTCCTT---------CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CccHHHHHHc-CcHHHHHHHHHcCCCCC---------CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence 4689999999 99999999999875432 2255789999999999999999999999998773 2 3222
Q ss_pred ------hhHHHHhhhcCCcccC-CcccCCCCchHHHHHHhcCChHHHHHHhhcCC
Q 002922 664 ------RQKQLVDRAGSGFIFK-PNVIGPAGLTPLHVAACRDDAENVLDALTDDP 711 (865)
Q Consensus 664 ------~~k~LV~~~s~~y~~d-~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp 711 (865)
+..++++.... ++.+ ++.++..|+||||+|+.+++.+ ++++|++.|
T Consensus 108 ~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~~g~t~l~~A~~~~~~~-~~~~Ll~~G 160 (162)
T 1ihb_A 108 HLAAKEGHLRVVEFLVK-HTASNVGHRNHKGDTACDLARLYGRNE-VVSLMQANG 160 (162)
T ss_dssp HHHHHTTCHHHHHHHHH-HSCCCTTCCCTTSCCHHHHHHHTTCHH-HHHHHHHTC
T ss_pred HHHHHcCCHHHHHHHHH-ccCCCCCCcCCCCCcHHHHHHHcCCHH-HHHHHHHhC
Confidence 33444442211 1334 6899999999999999998766 999998754
No 25
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.84 E-value=1.4e-20 Score=175.82 Aligned_cols=120 Identities=20% Similarity=0.135 Sum_probs=106.1
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHH
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 667 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~ 667 (865)
..++||+|+..|+.+++++|++.+++.+ ..+..|+||||+|+..|+.++|++|+++|++
T Consensus 34 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------ 92 (153)
T 1awc_B 34 GTSPLHLAAQYGHFSTTEVLLRAGVSRD---------ARTKVDRTPLHMAASEGHANIVEVLLKHGAD------------ 92 (153)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHTTTCCTT---------CCCTTCCCHHHHHHHHTCHHHHHHHHTTTCC------------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCC---------CCCCCCCCHHHHHHHcChHHHHHHHHHcCCC------------
Confidence 4589999999999999999998875422 2355799999999999999999999999864
Q ss_pred HHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHH
Q 002922 668 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQ 747 (865)
Q Consensus 668 LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~ 747 (865)
+|.+|..|+||||+|+..++.+ ++++|++. |+++|.+|.+|.||||+|+.+|+.+++++|.
T Consensus 93 ------------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~------ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~ 153 (153)
T 1awc_B 93 ------------VNAKDMLKMTALHWATEHNHQE-VVELLIKY------GADVHTQSKFCKTAFDISIDNGNEDLAEILQ 153 (153)
T ss_dssp ------------TTCCCTTSCCHHHHHHHTTCHH-HHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHC
T ss_pred ------------CCCCCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCccccCCCCCCHHHHHHHcCCHHHHHHhC
Confidence 6788999999999999998776 99999875 4788999999999999999999999999873
No 26
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.84 E-value=6.3e-21 Score=177.46 Aligned_cols=123 Identities=21% Similarity=0.160 Sum_probs=81.4
Q ss_pred ccchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhH
Q 002922 587 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQK 666 (865)
Q Consensus 587 R~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k 666 (865)
|..++||+|+..|..++++.||+. ...+++ ..+..|.||||+ +..|+.++|++|+++|+++
T Consensus 1 r~~~~L~~A~~~g~~~~v~~ll~~-~~~~~~-------~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~---------- 61 (156)
T 1bd8_A 1 RAGDRLSGAAARGDVQEVRRLLHR-ELVHPD-------ALNRFGKTALQV-MMFGSTAIALELLKQGASP---------- 61 (156)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHT-TCCCTT-------CCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCT----------
T ss_pred CcchHHHHHHHhCCHHHHHHHHHh-hCcCcc-------ccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCC----------
Confidence 446899999999999999999987 322332 235568999999 9999999999999998754
Q ss_pred HHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHH
Q 002922 667 QLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLV 746 (865)
Q Consensus 667 ~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL 746 (865)
|.+|..|+||||+|+..++.+ ++++|++. |+++|.+|.+|+||||+|+.+|+.+++++|
T Consensus 62 --------------~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 120 (156)
T 1bd8_A 62 --------------NVQDTSGTSPVHDAARTGFLD-TLKVLVEH------GADVNVPDGTGALPIHLAVQEGHTAVVSFL 120 (156)
T ss_dssp --------------TCCCTTSCCHHHHHHHTTCHH-HHHHHHHT------TCCSCCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred --------------CCcCCCCCCHHHHHHHcCcHH-HHHHHHHc------CCCCCCcCCCCCcHHHHHHHhChHHHHHHH
Confidence 444555555555555554443 55555442 244555555555555555555555555555
Q ss_pred HHh
Q 002922 747 QRK 749 (865)
Q Consensus 747 ~~K 749 (865)
+++
T Consensus 121 l~~ 123 (156)
T 1bd8_A 121 AAE 123 (156)
T ss_dssp HTT
T ss_pred Hhc
Confidence 544
No 27
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.84 E-value=1.9e-20 Score=176.59 Aligned_cols=112 Identities=19% Similarity=0.103 Sum_probs=89.4
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch-
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS- 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~- 663 (865)
..++||+|+..|+.++++.||+.+++.+. .+..|.||||+|+.+++.++|++|+++|++++. + +..+
T Consensus 36 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~---------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 106 (167)
T 3v31_A 36 GFTPLMWAAAHGQIAVVEFLLQNGADPQL---------LGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPL 106 (167)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCTTC---------CCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHH
T ss_pred CCCHHHHHHHCCCHHHHHHHHHcCCCCCC---------cCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHH
Confidence 45899999999999999999998754322 255789999999999999999999999998873 2 3222
Q ss_pred ------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcC
Q 002922 664 ------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDD 710 (865)
Q Consensus 664 ------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~d 710 (865)
+..++++.... ++++++.+|..|+||||+|+..++.+ ++++|++.
T Consensus 107 ~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~~~~-~~~~L~~~ 157 (167)
T 3v31_A 107 LYAVHGNHVKCVKMLLE-SGADPTIETDSGYNSMDLAVALGYRS-VQQVIESH 157 (167)
T ss_dssp HHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHH-HHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCcHH-HHHHHHHH
Confidence 34445553322 36789999999999999999998766 99999764
No 28
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.84 E-value=2.2e-21 Score=182.60 Aligned_cols=125 Identities=22% Similarity=0.175 Sum_probs=108.5
Q ss_pred ccchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhH
Q 002922 587 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQK 666 (865)
Q Consensus 587 R~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k 666 (865)
...++||+|+..|+.++++.||+.+++.+ ..+..|+||||+|+ +|+.++|++||++|++
T Consensus 11 ~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~----------- 69 (156)
T 1bi7_B 11 PSADWLATAAARGRVEEVRALLEAGANPN---------APNSYGRRPIQVMM-MGSARVAELLLLHGAE----------- 69 (156)
T ss_dssp CSTTHHHHHHHHTCHHHHHHHHTTTCCTT---------CCCSSSCCTTTSSC-TTCHHHHHHHHTTTCC-----------
T ss_pred cchHHHHHHHHcCCHHHHHHHHHcCCCCC---------CCCCCCCCHHHHHH-cCCHHHHHHHHHcCCC-----------
Confidence 45699999999999999999998865422 23567999999995 9999999999999864
Q ss_pred HHHhhhcCCcccCCcccCCCCch-HHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHH
Q 002922 667 QLVDRAGSGFIFKPNVIGPAGLT-PLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHL 745 (865)
Q Consensus 667 ~LV~~~s~~y~~d~Na~d~~G~T-PLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeL 745 (865)
+|.+|..|+| |||+|+..++.+ ++++|++. +|++|.+|..|+||||+|+.+|+.+++++
T Consensus 70 -------------~~~~d~~g~ttpL~~A~~~~~~~-~v~~Ll~~------ga~~~~~d~~g~tpl~~A~~~~~~~~v~~ 129 (156)
T 1bi7_B 70 -------------PNCADPATLTRPVHDAAREGFLD-TLVVLHRA------GARLDVRDAWGRLPVDLAEELGHRDVARY 129 (156)
T ss_dssp -------------CCCCCTTTCCCHHHHHHHHTCHH-HHHHHHHH------TCCSSCCCTTCCCHHHHHHHHTCHHHHHH
T ss_pred -------------CCCcCCCCCcHHHHHHHHCCCHH-HHHHHHHc------CCCCcccCCCCCCHHHHHHHhCHHHHHHH
Confidence 6788999999 999999998776 99999874 58899999999999999999999999999
Q ss_pred HHHhhhh
Q 002922 746 VQRKINK 752 (865)
Q Consensus 746 L~~K~~~ 752 (865)
|+++.++
T Consensus 130 Ll~~ga~ 136 (156)
T 1bi7_B 130 LRAAAGG 136 (156)
T ss_dssp HSSCC--
T ss_pred HHHcCCC
Confidence 9988665
No 29
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.84 E-value=1e-20 Score=181.07 Aligned_cols=139 Identities=19% Similarity=0.152 Sum_probs=114.2
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHH
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 667 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~ 667 (865)
+.++|+.|+..|+.++++.||+... . +.+..+..|+||||+|+..|+.++|++||++|++
T Consensus 5 ~~~~l~~A~~~g~~~~v~~ll~~~~-~-------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------ 64 (179)
T 3f6q_A 5 FMDDIFTQCREGNAVAVRLWLDNTE-N-------DLNQGDDHGFSPLHWACREGRSAVVEMLIMRGAR------------ 64 (179)
T ss_dssp --CCHHHHHHHTCHHHHHHHHHCTT-S-------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------------
T ss_pred HHHHHHHHHHcCCHHHHHHHHhcCc-c-------cccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC------------
Confidence 3468999999999999999998741 1 1223356799999999999999999999999864
Q ss_pred HHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHH
Q 002922 668 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQ 747 (865)
Q Consensus 668 LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~ 747 (865)
+|.+|..|+||||+|+..++.+ ++++|++. ++++|.+|.+|.||||+|+..|+.+++++|+
T Consensus 65 ------------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~------g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll 125 (179)
T 3f6q_A 65 ------------INVMNRGDDTPLHLAASHGHRD-IVQKLLQY------KADINAVNEHGNVPLHYACFWGQDQVAEDLV 125 (179)
T ss_dssp ------------TTCCCTTCCCHHHHHHHTTCHH-HHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred ------------CCCcCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCCCccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 5778889999999999998766 99999875 4788999999999999999999999999999
Q ss_pred Hhhhh---cCCCCCceEeecCC
Q 002922 748 RKINK---KSSESGRVILDIPG 766 (865)
Q Consensus 748 ~K~~~---~~~~~~~v~l~i~~ 766 (865)
++.++ +. ..|.++|+++.
T Consensus 126 ~~ga~~~~~~-~~g~tpl~~A~ 146 (179)
T 3f6q_A 126 ANGALVSICN-KYGEMPVDKAK 146 (179)
T ss_dssp HTTCCSSBCC-TTSCCGGGGSC
T ss_pred HCCCCcchhc-cCCCCcHHHHH
Confidence 88654 23 45666766663
No 30
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.84 E-value=6.9e-21 Score=191.41 Aligned_cols=151 Identities=21% Similarity=0.120 Sum_probs=113.3
Q ss_pred cchHHHHHHHC---CCHHHHHHHHHhhccCCccCC--CCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCc
Q 002922 588 FKWLLEFSMEH---DWCAVVKKLLGILFDGTVDTG--DHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPG 662 (865)
Q Consensus 588 ~~tLL~fAver---g~~aVvklLLd~ga~anV~~~--~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~ 662 (865)
.+++||+|+.. |+.+++++||+.+++.+.... .......+..|+||||+|+..|+.++|++||++|++++.....
T Consensus 43 g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~ 122 (256)
T 2etb_A 43 GKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACG 122 (256)
T ss_dssp TBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCS
T ss_pred CCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCccccc
Confidence 46999999999 999999999999876441100 0001122456999999999999999999999999876521000
Q ss_pred hhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHH--cCCH
Q 002922 663 SRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASL--RAHH 740 (865)
Q Consensus 663 ~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~--rGn~ 740 (865)
..+..+.+..+..|+||||+|+..++.+ +|++|++.+ ..+|++|.+|.+|+||||+|+. +++.
T Consensus 123 -----------~~~~~~~~~~~~~g~tpL~~A~~~~~~~-~v~~Ll~~~---~~ga~~n~~d~~g~TpLh~A~~~~~~~~ 187 (256)
T 2etb_A 123 -----------RFFQKHQGTCFYFGELPLSLAACTKQWD-VVTYLLENP---HQPASLEATDSLGNTVLHALVMIADNSP 187 (256)
T ss_dssp -----------GGGSCCSSSCCCSCSSHHHHHHHTTCHH-HHHHHHHCS---SCCCCTTCCCTTSCCHHHHHHHHCCSCH
T ss_pred -----------ccccccccccccCCCCHHHHHHHcCCHH-HHHHHHhcc---ccCCCcCccCCCCCCHHHHHHHcccCCc
Confidence 0011122334445999999999998776 999998721 1358899999999999999999 8888
Q ss_pred H-------HHHHHHHhhhhc
Q 002922 741 S-------YIHLVQRKINKK 753 (865)
Q Consensus 741 e-------iIeLL~~K~~~~ 753 (865)
+ ++++|+++.++.
T Consensus 188 ~~~~~~~~iv~~Ll~~ga~~ 207 (256)
T 2etb_A 188 ENSALVIHMYDGLLQMGARL 207 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHcCCCc
Confidence 8 999999987655
No 31
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.84 E-value=9.9e-21 Score=186.73 Aligned_cols=148 Identities=21% Similarity=0.182 Sum_probs=113.6
Q ss_pred cchHHHHHHHCCCHHHHHHHHHh-hccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCC-----C---
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGI-LFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNV-----L--- 658 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~-ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~-----~--- 658 (865)
.+++||+|+..|..++++.||+. +++ + +..+..|+||||+|+..|+.++|++||++|++.. .
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~~g~~--~-------~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~ 73 (232)
T 2rfa_A 3 WESPLLLAAKENDVQALSKLLKFEGCE--V-------HQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELY 73 (232)
T ss_dssp TTCHHHHHHHTTCHHHHHHHHTTTCSC--T-------TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhcCCC--c-------ccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCC
Confidence 36899999999999999999986 433 2 2336679999999999999999999999998642 1
Q ss_pred CCCch-------hhHHHHhhhcCCcccCCcccCC-------------CCchHHHHHHhcCChHHHHHHhhcCCCCCCccc
Q 002922 659 DKPGS-------RQKQLVDRAGSGFIFKPNVIGP-------------AGLTPLHVAACRDDAENVLDALTDDPGSVGIEA 718 (865)
Q Consensus 659 dg~~~-------~~k~LV~~~s~~y~~d~Na~d~-------------~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA 718 (865)
++..+ +..++++.+.. ++++++..+. .|+||||+|+..++.+ ++++|++. ||
T Consensus 74 ~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~------ga 145 (232)
T 2rfa_A 74 EGQTALHIAVINQNVNLVRALLA-RGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEE-IVRLLIEH------GA 145 (232)
T ss_dssp TTCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHH-HHHHHHHT------TC
T ss_pred CCcCHHHHHHHcCCHHHHHHHHh-CCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHH-HHHHHHHC------CC
Confidence 22221 23344442211 1456666654 7999999999998766 99999874 47
Q ss_pred cccccCCCCCCHHHHHHHcCCHHHH----HHHHHhhhh
Q 002922 719 WKSAQDSTGLTPNDYASLRAHHSYI----HLVQRKINK 752 (865)
Q Consensus 719 ~VNakD~~G~TPLHyAa~rGn~eiI----eLL~~K~~~ 752 (865)
++|.+|.+|+||||+|+.+|+.+++ ++|+++.++
T Consensus 146 ~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~ 183 (232)
T 2rfa_A 146 DIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGG 183 (232)
T ss_dssp CTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCS
T ss_pred CCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCc
Confidence 8899999999999999999999988 777776553
No 32
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.83 E-value=1.4e-20 Score=191.19 Aligned_cols=160 Identities=14% Similarity=-0.010 Sum_probs=130.3
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCC--CCch--
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLD--KPGS-- 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~d--g~~~-- 663 (865)
..++||+|+..|+.++++.||+.+++.+ ..+..|+||||+|+..|+.++|++|+++|++.+.+ +..+
T Consensus 36 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~ 106 (261)
T 2xai_A 36 HVSPLHEACLGGHLSCVKILLKHGAQVN---------GVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIH 106 (261)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTCCTT---------CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTCCHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCC---------CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCHHH
Confidence 4689999999999999999999875432 23567999999999999999999999999987642 3222
Q ss_pred -----hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcC
Q 002922 664 -----RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRA 738 (865)
Q Consensus 664 -----~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rG 738 (865)
+..++++.... +++++|.+|..|.||||+|+..++.+ ++++|++. ++++|. |..|.||||+|+.+|
T Consensus 107 ~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~------g~~~~~-~~~g~t~Lh~A~~~~ 177 (261)
T 2xai_A 107 EAARRGHVECVNSLIA-YGGNIDHKISHLGTPLYLACENQQRA-CVKKLLES------GADVNQ-GKGQDSPLHAVARTA 177 (261)
T ss_dssp HHHHTTCHHHHHHHHH-TTCCTTCCBTTTBCHHHHHHHTTCHH-HHHHHHHH------TCCTTC-CBTTBCHHHHHHHHT
T ss_pred HHHHcCcHHHHHHHHH-cCCCCCcCCCCCCCHHHHHHHhCCHH-HHHHHHHc------CCCCCC-CCCCCChHHHHHHcC
Confidence 33445553221 25789999999999999999998766 99999874 477785 899999999999999
Q ss_pred CHHHHHHHHHhhhh---cCCCCCceEeecCC
Q 002922 739 HHSYIHLVQRKINK---KSSESGRVILDIPG 766 (865)
Q Consensus 739 n~eiIeLL~~K~~~---~~~~~~~v~l~i~~ 766 (865)
+.+++++|+++.++ ++ .+|.++++++.
T Consensus 178 ~~~~v~~Ll~~gad~~~~d-~~g~tpl~~A~ 207 (261)
T 2xai_A 178 SEELACLLMDFGADTQAKN-AEGKRPVELVP 207 (261)
T ss_dssp CHHHHHHHHHTTCCTTCCC-TTSCCGGGGSC
T ss_pred CHHHHHHHHHcCCCCCCcC-CCCCChhhhcc
Confidence 99999999998665 44 67899999876
No 33
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.83 E-value=2.3e-20 Score=182.56 Aligned_cols=148 Identities=17% Similarity=0.132 Sum_probs=119.0
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCC-CCCC---CCCch
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAP-DNVL---DKPGS 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Ga-di~~---dg~~~ 663 (865)
..++||+|+..|+.++++.||+.+++.+ ..+..|+||||+|+..|+.++|++|+++++ +.+. ++..+
T Consensus 25 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~ 95 (223)
T 2f8y_A 25 GETALHLAARYSRSDAAKRLLEASADAN---------IQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTP 95 (223)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTT---------CCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCH
T ss_pred CCchHHHHHHcCCHHHHHHHHHcCCCCC---------CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcH
Confidence 4699999999999999999999875432 235679999999999999999999999987 4442 22221
Q ss_pred -------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHH
Q 002922 664 -------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASL 736 (865)
Q Consensus 664 -------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~ 736 (865)
...++++.... +++++|.+|..|+||||+|+..++.+ ++++|++. ++++|.+|..|.||||+|+.
T Consensus 96 L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~ 167 (223)
T 2f8y_A 96 LILAARLAVEGMLEDLIN-SHADVNAVDDLGKSALHWAAAVNNVD-AAVVLLKN------GANKDMQNNREETPLFLAAR 167 (223)
T ss_dssp HHHHHHHTCHHHHHHHHH-TTCCTTCBCTTSCBHHHHHHHTTCHH-HHHHHHHT------TCCTTCCCTTCCCHHHHHHH
T ss_pred HHHHHHhCcHHHHHHHHH-cCCCCcCcCCCCCcHHHHHHHcCCHH-HHHHHHHc------CCCCCCcCCCCcCHHHHHHH
Confidence 23344443221 35688999999999999999998766 99999875 47889999999999999999
Q ss_pred cCCHHHHHHHHHhhhh
Q 002922 737 RAHHSYIHLVQRKINK 752 (865)
Q Consensus 737 rGn~eiIeLL~~K~~~ 752 (865)
+|+.+++++|+++.++
T Consensus 168 ~~~~~~v~~Ll~~ga~ 183 (223)
T 2f8y_A 168 EGSYETAKVLLDHFAN 183 (223)
T ss_dssp HTCHHHHHHHHHTTCC
T ss_pred cCCHHHHHHHHHcCCC
Confidence 9999999999988665
No 34
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.83 E-value=2.3e-20 Score=195.38 Aligned_cols=160 Identities=15% Similarity=0.039 Sum_probs=125.1
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCC-CCCchHHhhccccHHHHHHHcCCHHHHHHHHh-cCCCCCC-C--CCc
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTG-DHTSSELAILEMGLLHKAVRRNCRPMVELLLN-YAPDNVL-D--KPG 662 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~-~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~-~Gadi~~-d--g~~ 662 (865)
..++||+|+..|+.+++++|++.+++.++... .......+..|.||||+|+++|+.++|++||+ .|++++. + +..
T Consensus 125 g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t 204 (337)
T 4g8k_A 125 GFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRN 204 (337)
T ss_dssp CCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCC
T ss_pred CCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCc
Confidence 45899999999999999999999876554211 11222345669999999999999999999995 6888773 2 221
Q ss_pred h-----------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHH
Q 002922 663 S-----------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPN 731 (865)
Q Consensus 663 ~-----------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPL 731 (865)
+ ....+++.+. .+++++|.+|..|+||||+||..++.+ +++.|+... ++++|.+|.+|+|||
T Consensus 205 ~l~~~~~~~~~~~~~~i~~lLl-~~gad~n~~d~~g~t~L~~a~~~~~~~-~v~~Ll~~~-----~~~vn~~d~~G~TpL 277 (337)
T 4g8k_A 205 ALIHALLSSDDSDVEAITHLLL-DHGADVNVRGERGKTPLILAVEKKHLG-LVQRLLEQE-----HIEINDTDSDGKTAL 277 (337)
T ss_dssp HHHHHHHHSCTTTHHHHHHHHH-HTTCCTTCCCGGGCCHHHHHHHTTCHH-HHHHHHTST-----TCCTTCBCTTSCBHH
T ss_pred HHHHHHHHcCcccHHHHHHHHH-HCCCCCCCcCCCCCCHHHHHHHhhhhH-HHHHHHHhc-----CCcccCcCCCCCCHH
Confidence 1 2234455322 236789999999999999999998766 888887643 588999999999999
Q ss_pred HHHHHcCCHHHHHHHHHhhhhcC
Q 002922 732 DYASLRAHHSYIHLVQRKINKKS 754 (865)
Q Consensus 732 HyAa~rGn~eiIeLL~~K~~~~~ 754 (865)
|+|+++|+.++|++|+++.++..
T Consensus 278 ~~A~~~g~~~iv~~Ll~~GAd~n 300 (337)
T 4g8k_A 278 LLAVELKLKKIAELLCKRGASTD 300 (337)
T ss_dssp HHHHHTTCHHHHHHHHTTSCSST
T ss_pred HHHHHcCCHHHHHHHHHCCCCCC
Confidence 99999999999999999988654
No 35
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.83 E-value=9.5e-21 Score=190.40 Aligned_cols=164 Identities=23% Similarity=0.138 Sum_probs=118.1
Q ss_pred cchHHHHHH---HCCCHHHHHHHHHhhccCCcc--CCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCc
Q 002922 588 FKWLLEFSM---EHDWCAVVKKLLGILFDGTVD--TGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPG 662 (865)
Q Consensus 588 ~~tLL~fAv---erg~~aVvklLLd~ga~anV~--~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~ 662 (865)
.+++||+|+ ..|+.+++++||+.+++.+.. .-.......+..|+||||+|+.+|+.+||++||++|++++.....
T Consensus 46 g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~ 125 (260)
T 3jxi_A 46 GKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARG 125 (260)
T ss_dssp CCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEE
T ss_pred CCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccc
Confidence 569999999 789999999999998652210 000111122447999999999999999999999999876421000
Q ss_pred hhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCC---
Q 002922 663 SRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAH--- 739 (865)
Q Consensus 663 ~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn--- 739 (865)
.... ..+.+..+..|+||||+||..++.+ +|++|++.+ ..++++|.+|.+|+||||+|+..|+
T Consensus 126 --------~~~~--~~~~~~~~~~g~tpL~~A~~~g~~~-~v~~Ll~~~---~~ga~~~~~d~~g~TpLh~A~~~~~~~~ 191 (260)
T 3jxi_A 126 --------RFFQ--PKDEGGYFYFGELPLSLAACTNQPH-IVHYLTENG---HKQADLRRQDSRGNTVLHALVAIADNTR 191 (260)
T ss_dssp --------CCCS--SSCCCCSCCSCSSHHHHHHHTTCHH-HHHHHHHCS---SCCCCTTCCCTTSCCHHHHHHHHCCSSH
T ss_pred --------cccC--cccccccccCCCCHHHHHHHcCCHH-HHHHHHhcc---ccCCCCcccCCCCCcHHHHHHHhccCch
Confidence 0000 0122333468999999999998766 999998721 0468899999999999999999888
Q ss_pred ------HHHHHHHHHhhhhcC---------CCCCceEeecC
Q 002922 740 ------HSYIHLVQRKINKKS---------SESGRVILDIP 765 (865)
Q Consensus 740 ------~eiIeLL~~K~~~~~---------~~~~~v~l~i~ 765 (865)
.+++++|+++.++.. ..+|.++|+++
T Consensus 192 ~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A 232 (260)
T 3jxi_A 192 ENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMA 232 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHH
T ss_pred hHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHH
Confidence 799999999876542 14555666554
No 36
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.83 E-value=3.4e-20 Score=178.95 Aligned_cols=111 Identities=14% Similarity=0.052 Sum_probs=89.2
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch-
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS- 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~- 663 (865)
..++||+|+..|+.+++++||+.+++.+ ..+..|+||||+|+..|+.++|++|+++|++++. + |..+
T Consensus 68 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 138 (192)
T 2rfm_A 68 GSTALIWAVKNNRLGIAEKLLSKGSNVN---------TKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPL 138 (192)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHTCCTT---------CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHH
T ss_pred CccHHHHHHHcCCHHHHHHHHHCCCCCC---------CCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHH
Confidence 4689999999999999999999875422 2356799999999999999999999999998873 2 3322
Q ss_pred ------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhc
Q 002922 664 ------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTD 709 (865)
Q Consensus 664 ------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~ 709 (865)
+..++++.+.. ++++++.+|..|+||||+|+..++.+ ++++|++
T Consensus 139 ~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~~~~-~v~~Ll~ 188 (192)
T 2rfm_A 139 IVASKYGRSEIVKKLLE-LGADISARDLTGLTAEASARIFGRQE-VIKIFTE 188 (192)
T ss_dssp HHHHHHTCHHHHHHHHH-TTCCTTCBCTTSCBHHHHHHHTTCHH-HHHHHHH
T ss_pred HHHHHcCCHHHHHHHHH-CCCCCCCcCCCCCCHHHHHHHhCcHH-HHHHHHh
Confidence 34455553322 26789999999999999999998766 9999976
No 37
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.83 E-value=3.6e-20 Score=176.13 Aligned_cols=122 Identities=25% Similarity=0.189 Sum_probs=108.0
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHH
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 667 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~ 667 (865)
..++||+|+..|+.+++++||+.+++.+ ..+..|.||||+|+..|+.+++++|+++|++
T Consensus 47 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------------ 105 (169)
T 2y1l_E 47 GWTPLHLAAFNGHLEIVEVLLKNGADVN---------AVDHAGMTPLRLAALFGHLEIVEVLLKNGAD------------ 105 (169)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCTT---------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCC---------ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------
Confidence 4589999999999999999999875422 2356799999999999999999999999864
Q ss_pred HHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHH
Q 002922 668 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQ 747 (865)
Q Consensus 668 LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~ 747 (865)
+|.+|..|.||||+|+..++.+ ++++|++. +++++.+|..|.||||+|+.+|+.+++++|+
T Consensus 106 ------------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~------g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~ 166 (169)
T 2y1l_E 106 ------------VNANDMEGHTPLHLAAMFGHLE-IVEVLLKN------GADVNAQDKFGKTAFDISIDNGNEDLAEILQ 166 (169)
T ss_dssp ------------TTCCCTTSCCHHHHHHHTTCHH-HHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred ------------CCCCCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCCCCcCCCCCCHHHHHHHhCCHHHHHHHH
Confidence 5778899999999999998776 99999875 4788999999999999999999999999998
Q ss_pred Hh
Q 002922 748 RK 749 (865)
Q Consensus 748 ~K 749 (865)
++
T Consensus 167 ~~ 168 (169)
T 2y1l_E 167 KL 168 (169)
T ss_dssp TC
T ss_pred Hc
Confidence 65
No 38
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.83 E-value=4.6e-20 Score=181.68 Aligned_cols=162 Identities=18% Similarity=0.070 Sum_probs=127.4
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCC----CCCC---CC
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAP----DNVL---DK 660 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Ga----di~~---dg 660 (865)
..++||+|+..|+.+++++|++.+++.+ ..+..|.||||+|+..++.+++++|+++++ +++. .+
T Consensus 46 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---------~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g 116 (241)
T 1k1a_A 46 RQTPLHLAVITTLPSVVRLLVTAGASPM---------ALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDG 116 (241)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCTT---------CCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTS
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCcc---------ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCC
Confidence 4589999999999999999999875432 225678999999999999999999999987 4432 12
Q ss_pred Cch-------hhHHHHhhhcCCcccCCcccC-CCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHH
Q 002922 661 PGS-------RQKQLVDRAGSGFIFKPNVIG-PAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPND 732 (865)
Q Consensus 661 ~~~-------~~k~LV~~~s~~y~~d~Na~d-~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLH 732 (865)
..+ +..++++.... ++++++..+ ..|.||||+|+.+++.+ ++++|++. ++++|.+|..|+||||
T Consensus 117 ~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~------g~~~~~~~~~g~t~L~ 188 (241)
T 1k1a_A 117 LTALHVAVNTECQETVQLLLE-RGADIDAVDIKSGRSPLIHAVENNSLS-MVQLLLQH------GANVNAQMYSGSSALH 188 (241)
T ss_dssp CCHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTTCCCHHHHHHHTTCHH-HHHHHHHT------TCCTTCBCTTSCBHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHH-cCCCcccccccCCCcHHHHHHHcCCHH-HHHHHHHc------CCCCCCcCCCCCCHHH
Confidence 221 33444543221 256788888 78999999999998776 99999875 4788999999999999
Q ss_pred HHHHcCCHHHHHHHHHhhhh---cCCCCCceEeecCCC
Q 002922 733 YASLRAHHSYIHLVQRKINK---KSSESGRVILDIPGS 767 (865)
Q Consensus 733 yAa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~~~ 767 (865)
+|+.+|+.+++++|+++.++ +. .+|+++|+++..
T Consensus 189 ~A~~~~~~~~v~~Ll~~ga~~~~~~-~~g~tpl~~A~~ 225 (241)
T 1k1a_A 189 SASGRGLLPLVRTLVRSGADSSLKN-CHNDTPLMVARS 225 (241)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCC-TTSCCTTTTCSS
T ss_pred HHHHcCCHHHHHHHHhcCCCCCCcC-CCCCCHHHHHHh
Confidence 99999999999999998665 33 467777777644
No 39
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.83 E-value=1.7e-20 Score=188.64 Aligned_cols=138 Identities=17% Similarity=0.078 Sum_probs=110.9
Q ss_pred ccchHHHHHHHCCCHHHHHHHHHhhccCCccCCC-----CCchHHhhccccHHHHHHHcCCHHHHHHHHh---cCCCCCC
Q 002922 587 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGD-----HTSSELAILEMGLLHKAVRRNCRPMVELLLN---YAPDNVL 658 (865)
Q Consensus 587 R~~tLL~fAverg~~aVvklLLd~ga~anV~~~~-----~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~---~Gadi~~ 658 (865)
...++||+|+.+|+.+++++||+.+++.+....+ .+....+..|+||||+|+.+|+.+||++||+ +|+
T Consensus 92 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga---- 167 (260)
T 3jxi_A 92 RGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQA---- 167 (260)
T ss_dssp ESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCC----
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCC----
Confidence 3569999999999999999999988654331000 0000001469999999999999999999999 664
Q ss_pred CCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCCh--------HHHHHHhhcCCCCCCccccc-------ccc
Q 002922 659 DKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDA--------ENVLDALTDDPGSVGIEAWK-------SAQ 723 (865)
Q Consensus 659 dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~--------e~IVelLL~dp~~Ig~gA~V-------Nak 723 (865)
++|.+|..|+||||+|+..++. .+++++|++. ||++ |.+
T Consensus 168 --------------------~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~------ga~~~~~~~~~~~~ 221 (260)
T 3jxi_A 168 --------------------DLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIK------CAKLFPDTNLEALL 221 (260)
T ss_dssp --------------------CTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHH------HHHHCTTCCGGGCC
T ss_pred --------------------CCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHh------Ccccccccchhhcc
Confidence 4688999999999999987652 2499999764 4777 789
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHhhhhcC
Q 002922 724 DSTGLTPNDYASLRAHHSYIHLVQRKINKKS 754 (865)
Q Consensus 724 D~~G~TPLHyAa~rGn~eiIeLL~~K~~~~~ 754 (865)
|.+|+||||+|+.+|+.+++++|+++..+..
T Consensus 222 d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~ 252 (260)
T 3jxi_A 222 NNDGLSPLMMAAKTGKIGIFQHIIRREIADA 252 (260)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHcCCHHHHHHHHHhCCCcc
Confidence 9999999999999999999999999987654
No 40
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.83 E-value=2.4e-20 Score=173.48 Aligned_cols=120 Identities=23% Similarity=0.247 Sum_probs=106.4
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHH
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 667 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~ 667 (865)
..++||+ +..|+.++++.||+.+++.+ ..+..|.||||+|+.+|+.++|++|+++|++
T Consensus 36 g~t~L~~-~~~~~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------ 93 (156)
T 1bd8_A 36 GKTALQV-MMFGSTAIALELLKQGASPN---------VQDTSGTSPVHDAARTGFLDTLKVLVEHGAD------------ 93 (156)
T ss_dssp SCCHHHH-SCTTCHHHHHHHHHTTCCTT---------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------------
T ss_pred CCcHHHH-HHcCCHHHHHHHHHCCCCCC---------CcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC------------
Confidence 4699999 99999999999999875432 2356799999999999999999999999864
Q ss_pred HHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHH
Q 002922 668 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQ 747 (865)
Q Consensus 668 LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~ 747 (865)
+|.+|..|+||||+|+..++.+ ++++|++. ++++.+|.+|.||||+|+.+|+.+++++|+
T Consensus 94 ------------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~-------~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll 153 (156)
T 1bd8_A 94 ------------VNVPDGTGALPIHLAVQEGHTA-VVSFLAAE-------SDLHRRDARGLTPLELALQRGAQDLVDILQ 153 (156)
T ss_dssp ------------SCCCCTTSCCHHHHHHHHTCHH-HHHHHHTT-------SCTTCCCTTSCCHHHHHHHSCCHHHHHHHH
T ss_pred ------------CCCcCCCCCcHHHHHHHhChHH-HHHHHHhc-------cCCCCcCCCCCCHHHHHHHcCcHHHHHHHH
Confidence 6788999999999999998776 99999763 678999999999999999999999999998
Q ss_pred Hh
Q 002922 748 RK 749 (865)
Q Consensus 748 ~K 749 (865)
++
T Consensus 154 ~~ 155 (156)
T 1bd8_A 154 GH 155 (156)
T ss_dssp TT
T ss_pred hh
Confidence 76
No 41
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.83 E-value=5.2e-20 Score=190.28 Aligned_cols=134 Identities=20% Similarity=0.104 Sum_probs=100.1
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhc-cCCc-cCCCCCchH----------------------------HhhccccHHHHH
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILF-DGTV-DTGDHTSSE----------------------------LAILEMGLLHKA 637 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga-~anV-~~~~~s~~~----------------------------~~~~G~TpLH~A 637 (865)
..++||+|+..|+.+++++||+.++ +.+. +..+.++.. .+..|+||||+|
T Consensus 111 g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A 190 (276)
T 4hbd_A 111 GNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLA 190 (276)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHH
T ss_pred CCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHH
Confidence 4699999999999999999999885 3222 111222211 011255555555
Q ss_pred HHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCcc
Q 002922 638 VRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIE 717 (865)
Q Consensus 638 V~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~g 717 (865)
+.+|+.++|++||++|+ ++|.+|..|+||||+|+..++.+ +|++|++. .+
T Consensus 191 ~~~g~~~~v~~Ll~~ga------------------------d~n~~d~~G~TpLh~A~~~g~~~-iv~~Ll~~-----~g 240 (276)
T 4hbd_A 191 VSHGRVDVVKALLACEA------------------------DVNVQDDDGSTALMCACEHGHKE-IAGLLLAV-----PS 240 (276)
T ss_dssp HHTTCHHHHHHHHHTTC------------------------CTTCCCTTSCCHHHHHHHHTCHH-HHHHHHTS-----TT
T ss_pred HHcCCHHHHHHHHhCCC------------------------CCCCCCCCCCCHHHHHHHCCCHH-HHHHHHhc-----CC
Confidence 55555555555555553 57889999999999999998766 99999872 25
Q ss_pred ccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhh
Q 002922 718 AWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKIN 751 (865)
Q Consensus 718 A~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~ 751 (865)
+++|.+|.+|+||||+|+.+|+.+++++|+++.+
T Consensus 241 ad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~~ 274 (276)
T 4hbd_A 241 CDISLTDRDGSTALMVALDAGQSEIASMLYSRMN 274 (276)
T ss_dssp CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHCC
T ss_pred CCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhccC
Confidence 8889999999999999999999999999998754
No 42
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.82 E-value=1.8e-20 Score=176.38 Aligned_cols=123 Identities=24% Similarity=0.175 Sum_probs=107.0
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHH
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 667 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~ 667 (865)
..++||+|+..|+.+++++||+.+++.+ ..+..|+||||+|+..|+.++|++|+++|++
T Consensus 42 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------ 100 (165)
T 3twr_A 42 QSTPLHFAAGYNRVSVVEYLLQHGADVH---------AKDKGGLVPLHNACSYGHYEVAELLVKHGAV------------ 100 (165)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTT---------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------------
T ss_pred CCCHHHHHHHcChHHHHHHHHhcCCCCC---------ccCCCCCCHHHHHHHcCcHHHHHHHHhCCCC------------
Confidence 4599999999999999999999875422 2356799999999999999999999999864
Q ss_pred HHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHH
Q 002922 668 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQ 747 (865)
Q Consensus 668 LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~ 747 (865)
+|.+|..|+||||+|+..++.+ ++++|++. ++++|.+|.+|+||||+|+. |+.+++++|.
T Consensus 101 ------------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~------ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~ 160 (165)
T 3twr_A 101 ------------VNVADLWKFTPLHEAAAKGKYE-ICKLLLQH------GADPTKKNRDGNTPLDLVKD-GDTDIQDLLR 160 (165)
T ss_dssp ------------TTCCCTTCCCHHHHHHHTTCHH-HHHHHHHT------TCCTTCCCTTSCCTGGGSCT-TCHHHHHHHH
T ss_pred ------------CCCcCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCCcccCCCCCChhHhHhc-CChHHHHHHh
Confidence 5778999999999999998776 99999875 47889999999999999877 8999999998
Q ss_pred Hhhh
Q 002922 748 RKIN 751 (865)
Q Consensus 748 ~K~~ 751 (865)
++.+
T Consensus 161 ~~gA 164 (165)
T 3twr_A 161 GDAA 164 (165)
T ss_dssp TC--
T ss_pred hccc
Confidence 7653
No 43
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.82 E-value=2.9e-20 Score=188.93 Aligned_cols=161 Identities=22% Similarity=0.104 Sum_probs=119.6
Q ss_pred cchHHHHHHHC---CCHHHHHHHHHhhccCC-----ccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCC
Q 002922 588 FKWLLEFSMEH---DWCAVVKKLLGILFDGT-----VDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLD 659 (865)
Q Consensus 588 ~~tLL~fAver---g~~aVvklLLd~ga~an-----V~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~d 659 (865)
..++||+|+.. |+.+++++||+.+++.+ ++. .....+..|+||||+|+..|+.++|++||++|++++..
T Consensus 54 g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~---~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~ 130 (273)
T 2pnn_A 54 GKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNA---SYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAA 130 (273)
T ss_dssp CCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTC---CCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred CCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhc---ccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCcc
Confidence 46999999986 99999999999986522 111 11123457999999999999999999999999876521
Q ss_pred CCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCC
Q 002922 660 KPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAH 739 (865)
Q Consensus 660 g~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn 739 (865)
.... ... ..+.+..+..|+||||+|+..++.+ +|++|++.+ ..++++|.+|.+|+||||+|+..|+
T Consensus 131 ~~~~-------~~~---~~~~~~~~~~g~tpL~~A~~~g~~~-~v~~Ll~~~---~~gad~~~~d~~g~tpLh~A~~~~~ 196 (273)
T 2pnn_A 131 ANGD-------FFK---KTKGRPGFYFGELPLSLAACTNQLA-IVKFLLQNS---WQPADISARDSVGNTVLHALVEVAD 196 (273)
T ss_dssp BCSG-------GGS---SCSSSCCCCSCBSHHHHHHHTTCHH-HHHHHHHCS---SCCCCTTCCCTTSCCHHHHHHHHCC
T ss_pred cccc-------ccc---cccccccccCCCCHHHHHHHcCCHH-HHHHHHhcc---cCCCCceeeCCCCCcHHHHHHHccC
Confidence 0000 000 0123445568999999999998776 999998731 0358899999999999999999998
Q ss_pred ---------HHHHHHHHHhhhhcC---------CCCCceEeecC
Q 002922 740 ---------HSYIHLVQRKINKKS---------SESGRVILDIP 765 (865)
Q Consensus 740 ---------~eiIeLL~~K~~~~~---------~~~~~v~l~i~ 765 (865)
.+++++|+++.++.. ...|.++|+++
T Consensus 197 ~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A 240 (273)
T 2pnn_A 197 NTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALA 240 (273)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHH
T ss_pred cchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHH
Confidence 799999999876642 14555666554
No 44
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.82 E-value=3.7e-20 Score=181.33 Aligned_cols=161 Identities=17% Similarity=0.028 Sum_probs=126.3
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCC--C----CCCc
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNV--L----DKPG 662 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~--~----dg~~ 662 (865)
+++||+|+..|..++++.||+.+.+.. ...+..|.||||+|+..|+.++|++|+++|++.+ . .+..
T Consensus 3 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~--------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t 74 (228)
T 2dzn_A 3 NYPLHQACMENEFFKVQELLHSKPSLL--------LQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWT 74 (228)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHCGGGT--------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCC
T ss_pred ccHHHHHHHhCCHHHHHHHHhcCcccc--------ccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCC
Confidence 589999999999999999999864321 1135679999999999999999999999994433 2 2222
Q ss_pred h-------hhHHHHh-hhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHH
Q 002922 663 S-------RQKQLVD-RAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYA 734 (865)
Q Consensus 663 ~-------~~k~LV~-~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyA 734 (865)
+ +..++++ +...++..+++.++..|.||||+|+..++.+ ++++|++. ++++|.+|.+|+||||+|
T Consensus 75 ~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~-~~~~Ll~~------g~~~~~~~~~g~t~L~~A 147 (228)
T 2dzn_A 75 PFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFE-VSQFLIEN------GASVRIKDKFNQIPLHRA 147 (228)
T ss_dssp HHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHH-HHHHHHHT------TCCSCCCCTTSCCHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHh-HHHHHHHc------CCCccccCCCCCCHHHHH
Confidence 2 3444555 3333334788999999999999999998766 99999875 478899999999999999
Q ss_pred HHcCCHHHHHHHHHhh-hh---cCCCCCceEeecC
Q 002922 735 SLRAHHSYIHLVQRKI-NK---KSSESGRVILDIP 765 (865)
Q Consensus 735 a~rGn~eiIeLL~~K~-~~---~~~~~~~v~l~i~ 765 (865)
+.+|+.+++++|+++. .+ +. ..|.++|+++
T Consensus 148 ~~~~~~~~v~~Ll~~g~~~~~~~d-~~g~t~L~~A 181 (228)
T 2dzn_A 148 ASVGSLKLIELLCGLGKSAVNWQD-KQGWTPLFHA 181 (228)
T ss_dssp HHTTCHHHHHHHHTTTCCCSCCCC-TTSCCHHHHH
T ss_pred HHcCCHHHHHHHHhcCcccccCcC-CCCCCHHHHH
Confidence 9999999999999876 33 33 5677777775
No 45
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.82 E-value=6.4e-20 Score=181.06 Aligned_cols=161 Identities=14% Similarity=0.032 Sum_probs=116.9
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch-
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS- 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~- 663 (865)
.+++||+|+..|..++++.|++.+++.+. .+..|+||||+|+..|+.++|++|+++|++++. + +..+
T Consensus 11 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~---------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 81 (237)
T 3b7b_A 11 KRSPLHAAAEAGHVDICHMLVQAGANIDT---------CSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCL 81 (237)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCTTC---------CCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHH
T ss_pred CCCHHHHHHHcCcHHHHHHHHHcCCCcCc---------cCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHH
Confidence 35899999999999999999988754322 245688999999999999999999998887653 2 2221
Q ss_pred ------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHc
Q 002922 664 ------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLR 737 (865)
Q Consensus 664 ------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~r 737 (865)
+..++++........+++..+..|+||||+|+..++.+ ++++|++. ++++|.+|..|.||||+|+.+
T Consensus 82 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~-~~~~Ll~~------g~~~~~~~~~g~t~L~~A~~~ 154 (237)
T 3b7b_A 82 HLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVD-LVKLLLSK------GSDINIRDNEENICLHWAAFS 154 (237)
T ss_dssp HHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHH-HHHHHHHT------TCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHH-HHHHHHHC------CCCCCccCCCCCCHHHHHHHC
Confidence 23444443322223567888888888888888887665 88888764 467788888888888888888
Q ss_pred CCHHHHHHHHHhhhh---cCCCCCceEeecC
Q 002922 738 AHHSYIHLVQRKINK---KSSESGRVILDIP 765 (865)
Q Consensus 738 Gn~eiIeLL~~K~~~---~~~~~~~v~l~i~ 765 (865)
|+.+++++|+++..+ +. ..|.++|+++
T Consensus 155 ~~~~~~~~Ll~~g~~~~~~~-~~g~t~L~~A 184 (237)
T 3b7b_A 155 GCVDIAEILLAAKCDLHAVN-IHGDSPLHIA 184 (237)
T ss_dssp CCHHHHHHHHTTTCCTTCCC-TTCCCHHHHH
T ss_pred CCHHHHHHHHHcCCCCCCcC-CCCCCHHHHH
Confidence 888888888877554 22 3566666665
No 46
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.82 E-value=3.7e-20 Score=186.12 Aligned_cols=134 Identities=17% Similarity=0.095 Sum_probs=108.6
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCC----CCchHHhhccccHHHHHHHcCCHHHHHHHHh---cCCCCCCCC
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGD----HTSSELAILEMGLLHKAVRRNCRPMVELLLN---YAPDNVLDK 660 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~----~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~---~Gadi~~dg 660 (865)
..++||+|+.+|+.+++++||+.+++.+..... .+....+..|+||||+|+..|+.++|++||+ +|+
T Consensus 90 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga------ 163 (256)
T 2etb_A 90 GHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPA------ 163 (256)
T ss_dssp TCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCC------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCC------
Confidence 569999999999999999999998654331000 0000001129999999999999999999999 765
Q ss_pred CchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHh--cCChHH-------HHHHhhcCCCCCCccccc-------cccC
Q 002922 661 PGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAAC--RDDAEN-------VLDALTDDPGSVGIEAWK-------SAQD 724 (865)
Q Consensus 661 ~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~--~~~~e~-------IVelLL~dp~~Ig~gA~V-------NakD 724 (865)
++|.+|..|+||||+|+. .++ .+ ++++|++. ||++ |.+|
T Consensus 164 ------------------~~n~~d~~g~TpLh~A~~~~~~~-~~~~~~~~~iv~~Ll~~------ga~~~~~~~~~~~~d 218 (256)
T 2etb_A 164 ------------------SLEATDSLGNTVLHALVMIADNS-PENSALVIHMYDGLLQM------GARLCPTVQLEEISN 218 (256)
T ss_dssp ------------------CTTCCCTTSCCHHHHHHHHCCSC-HHHHHHHHHHHHHHHHH------HHHHSTTCCGGGCCC
T ss_pred ------------------CcCccCCCCCCHHHHHHHcccCC-chhhHHHHHHHHHHHHc------CCCcccccccccccC
Confidence 468899999999999998 443 44 99999764 5788 9999
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHHhhhh
Q 002922 725 STGLTPNDYASLRAHHSYIHLVQRKINK 752 (865)
Q Consensus 725 ~~G~TPLHyAa~rGn~eiIeLL~~K~~~ 752 (865)
..|+||||+|+.+|+.+++++|+++..+
T Consensus 219 ~~g~tpL~~A~~~g~~~~v~~Ll~~g~~ 246 (256)
T 2etb_A 219 HQGLTPLKLAAKEGKIEIFRHILQREFS 246 (256)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHhCCHHHHHHHHhCCCC
Confidence 9999999999999999999999998765
No 47
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.82 E-value=2.5e-20 Score=185.18 Aligned_cols=143 Identities=18% Similarity=0.108 Sum_probs=94.4
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHH
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 667 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~ 667 (865)
..++||+|+..|+.+++++||+.+++.+ ..+..|+||||+|+..|+.++|++|+++|++...
T Consensus 45 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~--------- 106 (236)
T 1ikn_D 45 QQTPLHLAVITNQPEIAEALLGAGCDPE---------LRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHL--------- 106 (236)
T ss_dssp CCCHHHHHHHTTCHHHHHCCCSCCCCSC---------CCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSS---------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCC---------CcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhH---------
Confidence 4699999999999999999998765432 2356799999999999999999999999875210
Q ss_pred HHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCC-CCCCHHHHHHHcCCHHHHHHH
Q 002922 668 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDS-TGLTPNDYASLRAHHSYIHLV 746 (865)
Q Consensus 668 LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~-~G~TPLHyAa~rGn~eiIeLL 746 (865)
...++..+..|.||||+|+..++.+ ++++|++. ++++|.+|. .|+||||+|+..|+.+++++|
T Consensus 107 ---------~~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~------g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~L 170 (236)
T 1ikn_D 107 ---------HSILKATNYNGHTCLHLASIHGYLG-IVELLVSL------GADVNAQEPCNGRTALHLAVDLQNPDLVSLL 170 (236)
T ss_dssp ---------SCGGGCCCTTCCCHHHHHHHTTCHH-HHHHHHHH------TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHH
T ss_pred ---------HHHhhccCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 1123445555666666666655444 56666542 355555655 566666666666666666666
Q ss_pred HHhhhh---cCCCCCceEeecC
Q 002922 747 QRKINK---KSSESGRVILDIP 765 (865)
Q Consensus 747 ~~K~~~---~~~~~~~v~l~i~ 765 (865)
+++.++ +. .+|.++|+++
T Consensus 171 l~~ga~~~~~~-~~g~tpl~~A 191 (236)
T 1ikn_D 171 LKCGADVNRVT-YQGYSPYQLT 191 (236)
T ss_dssp HTTTCCSCCCC-TTCCCGGGGC
T ss_pred HHcCCCCCccc-CCCCCHHHHH
Confidence 655433 22 3455555555
No 48
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.82 E-value=8e-20 Score=176.01 Aligned_cols=147 Identities=15% Similarity=0.087 Sum_probs=112.8
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHH-hcCCCCCC-C--CCch
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLL-NYAPDNVL-D--KPGS 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL-~~Gadi~~-d--g~~~ 663 (865)
..++||+|+.+|+.+++++||+.+++.+. .+..|.||||+|+..|+.+++++|+ ..+++++. + +..+
T Consensus 39 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~---------~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~ 109 (201)
T 3hra_A 39 GNTPLNIAVHNNDIEIAKALIDRGADINL---------QNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNA 109 (201)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCTTC---------CCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCS
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCC---------CCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcH
Confidence 45899999999999999999998754332 3567899999999999999999999 55555552 2 2221
Q ss_pred -------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCC----hHHHHHHhhcCCCCCCccccccccCCCCCCHHH
Q 002922 664 -------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDD----AENVLDALTDDPGSVGIEAWKSAQDSTGLTPND 732 (865)
Q Consensus 664 -------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~----~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLH 732 (865)
+..++++........++|.+|..|+||||+|+..++ ..+++++|++. ||++|.+|.+|+||||
T Consensus 110 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~------ga~~~~~~~~g~t~l~ 183 (201)
T 3hra_A 110 LIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMEN------GADQSIKDNSGRTAMD 183 (201)
T ss_dssp HHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHT------TCCTTCCCTTSCCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHC------CCCCCccCCCCCCHHH
Confidence 233444432221125789999999999999998876 14499999875 4788999999999999
Q ss_pred HHHHcCCHHHHHHHHHh
Q 002922 733 YASLRAHHSYIHLVQRK 749 (865)
Q Consensus 733 yAa~rGn~eiIeLL~~K 749 (865)
+|+.+|+.+++++|+++
T Consensus 184 ~A~~~~~~~~~~~Ll~~ 200 (201)
T 3hra_A 184 YANQKGYTEISKILAQY 200 (201)
T ss_dssp HHHHHTCHHHHHHHHTC
T ss_pred HHHHcCCHhHHHHHHhc
Confidence 99999999999998865
No 49
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.82 E-value=7.4e-20 Score=189.30 Aligned_cols=160 Identities=14% Similarity=-0.016 Sum_probs=129.2
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCC--CCch--
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLD--KPGS-- 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~d--g~~~-- 663 (865)
..++||+|+..|+.+++++||+.+++.+ ..+..|.||||+|+..|+.++|++|+++|++++.+ +..+
T Consensus 92 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~ 162 (285)
T 3d9h_A 92 HVSPLHEACLGGHLSCVKILLKHGAQVN---------GVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIH 162 (285)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCSS---------CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTSCHHH
T ss_pred CCCHHHHHHHCCcHHHHHHHHHCCCCCC---------CCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCCCCCCHHH
Confidence 4699999999999999999999875432 23567999999999999999999999999987632 3222
Q ss_pred -----hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcC
Q 002922 664 -----RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRA 738 (865)
Q Consensus 664 -----~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rG 738 (865)
+..++++.+. .+++++|.+|..|+||||+|+..++.+ ++++|++. ++++|. |..|.||||+|+.+|
T Consensus 163 ~A~~~g~~~~v~~Ll-~~g~~~~~~d~~g~t~L~~A~~~~~~~-~v~~Ll~~------ga~~~~-~~~g~t~L~~A~~~~ 233 (285)
T 3d9h_A 163 EAARRGHVECVNSLI-AYGGNIDHKISHLGTPLYLACENQQRA-CVKKLLES------GADVNQ-GKGQDSPLHAVVRTA 233 (285)
T ss_dssp HHHHHTCHHHHHHHH-HTTCCTTCCBTTTBCHHHHHHHTTCHH-HHHHHHHT------TCCTTC-CBTTBCHHHHHHHTT
T ss_pred HHHHcCCHHHHHHHH-HCCCCCCCcCCCCCCHHHHHHHcCcHH-HHHHHHHC------CCCCCC-CCCCCCHHHHHHHcC
Confidence 3344555322 135689999999999999999998776 99999875 467774 899999999999999
Q ss_pred CHHHHHHHHHhhhh---cCCCCCceEeecCC
Q 002922 739 HHSYIHLVQRKINK---KSSESGRVILDIPG 766 (865)
Q Consensus 739 n~eiIeLL~~K~~~---~~~~~~~v~l~i~~ 766 (865)
+.+++++|+++.++ ++ .+|.++|+++.
T Consensus 234 ~~~~v~~Ll~~gad~~~~d-~~g~t~l~~A~ 263 (285)
T 3d9h_A 234 SEELACLLMDFGADTQAKN-AEGKRPVELVP 263 (285)
T ss_dssp CHHHHHHHHHTTCCTTCCC-TTSCCGGGGSC
T ss_pred CHHHHHHHHHCCCCCCCcC-CCCCCHHHHhc
Confidence 99999999998554 44 57888888875
No 50
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.82 E-value=3.4e-20 Score=178.61 Aligned_cols=163 Identities=18% Similarity=0.069 Sum_probs=121.7
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch--
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS-- 663 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~-- 663 (865)
.++||+|+..|..++++.||.... .+++..+..|+||||+|++.|+.++|++||++|++++. + +..+
T Consensus 6 ~~~L~~A~~~g~~~~v~~ll~~~~--------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~ 77 (201)
T 3hra_A 6 VGALLEAANQRDTKKVKEILQDTT--------YQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYL 77 (201)
T ss_dssp TTHHHHHHHTTCHHHHHHHHTCTT--------CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred ccHHHHHHHhccHHHHHHHHHcCC--------CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHH
Confidence 489999999999999999997642 12223356799999999999999999999999998763 2 2221
Q ss_pred -----hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcC
Q 002922 664 -----RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRA 738 (865)
Q Consensus 664 -----~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rG 738 (865)
+..++++........+++.++..|.||||+|+..++.+ ++++|++.+ .+++|.+|.+|+||||+|+..|
T Consensus 78 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~g-----~~~~~~~~~~g~t~L~~A~~~~ 151 (201)
T 3hra_A 78 YAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHID-NVKLLLEDG-----REDIDFQNDFGYTALIEAVGLR 151 (201)
T ss_dssp HHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHH-HHHHHHHHC-----CCCTTCCCTTSCCHHHHHHHSS
T ss_pred HHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHH-HHHHHHHcC-----CCCcCCCCCCCCCHHHHHHHhc
Confidence 23344443322235578889999999999999987766 899997743 2678899999999999999888
Q ss_pred C-----HHHHHHHHHhhhhcC--CCCCceEeecC
Q 002922 739 H-----HSYIHLVQRKINKKS--SESGRVILDIP 765 (865)
Q Consensus 739 n-----~eiIeLL~~K~~~~~--~~~~~v~l~i~ 765 (865)
+ .+++++|+++.++.. ..+|.++|+++
T Consensus 152 ~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A 185 (201)
T 3hra_A 152 EGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYA 185 (201)
T ss_dssp CCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred cchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHH
Confidence 7 889999988765422 03455555543
No 51
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.82 E-value=8.9e-20 Score=180.05 Aligned_cols=162 Identities=19% Similarity=0.061 Sum_probs=129.1
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcC-CCCCC-C--CCch
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYA-PDNVL-D--KPGS 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~G-adi~~-d--g~~~ 663 (865)
..++||+|+..|..+++++|++.+++.+ ..+..|.||||+|+..|+.+++++|+++| ++++. + +..+
T Consensus 44 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~ 114 (237)
T 3b7b_A 44 QRTPLMEAAENNHLEAVKYLIKAGALVD---------PKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTP 114 (237)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHTTTCCCC---------CCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCH
T ss_pred CCCHHHHHHHhCCHHHHHHHHhCCCCCC---------CCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCH
Confidence 4589999999999999999998875422 22557899999999999999999999998 55542 2 2222
Q ss_pred -------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHH
Q 002922 664 -------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASL 736 (865)
Q Consensus 664 -------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~ 736 (865)
+..++++.... ++++++.++..|.||||+|+..++.+ ++++|++. ++++|.+|..|.||||+|+.
T Consensus 115 L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~-~~~~Ll~~------g~~~~~~~~~g~t~L~~A~~ 186 (237)
T 3b7b_A 115 MIWATEYKHVDLVKLLLS-KGSDINIRDNEENICLHWAAFSGCVD-IAEILLAA------KCDLHAVNIHGDSPLHIAAR 186 (237)
T ss_dssp HHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHCCHH-HHHHHHTT------TCCTTCCCTTCCCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHH-CCCCCCccCCCCCCHHHHHHHCCCHH-HHHHHHHc------CCCCCCcCCCCCCHHHHHHH
Confidence 33445553221 36789999999999999999998776 99999875 47889999999999999999
Q ss_pred cCCHHHHHHHHHhhhh---cCCCCCceEeecCCC
Q 002922 737 RAHHSYIHLVQRKINK---KSSESGRVILDIPGS 767 (865)
Q Consensus 737 rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~~~ 767 (865)
+|+.+++++|+++..+ +. .+|.++|+++..
T Consensus 187 ~~~~~~v~~Ll~~gad~~~~d-~~g~t~l~~A~~ 219 (237)
T 3b7b_A 187 ENRYDCVVLFLSRDSDVTLKN-KEGETPLQCASL 219 (237)
T ss_dssp TTCHHHHHHHHTTTCCTTCCC-TTSCCHHHHSCT
T ss_pred hCCHhHHHHHHHcCCCCCccC-CCCCCHHHHHHH
Confidence 9999999999998665 33 467777777643
No 52
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.82 E-value=5.9e-20 Score=165.94 Aligned_cols=116 Identities=19% Similarity=0.119 Sum_probs=98.8
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHH
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 667 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~ 667 (865)
..++||+|+..|+.++++.||+.+++.+ ..+..|+||||+|+..|+.++|++||++|++
T Consensus 7 ~~~~l~~A~~~~~~~~v~~ll~~~~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------ 65 (123)
T 3aaa_C 7 CDKEFMWALKNGDLDEVKDYVAKGEDVN---------RTLEGGRKPLHYAADCGQLEILEFLLLKGAD------------ 65 (123)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTT---------SCCTTSSCHHHHHHHTTCHHHHHHHHTTTCC------------
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCCCcC---------ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC------------
Confidence 4589999999999999999999875422 2356799999999999999999999999864
Q ss_pred HHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHH
Q 002922 668 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLV 746 (865)
Q Consensus 668 LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL 746 (865)
+|.+|..|+||||+|+..++.+ ++++|++. +++++.+|.+|+||||+|. +.++.++|
T Consensus 66 ------------~~~~d~~g~tpL~~A~~~~~~~-~v~~Ll~~------ga~~~~~~~~g~t~l~~A~---~~~~~~ll 122 (123)
T 3aaa_C 66 ------------INAPDKHHITPLLSAVYEGHVS-CVKLLLSK------GADKTVKGPDGLTAFEATD---NQAIKALL 122 (123)
T ss_dssp ------------TTCCCTTSCCHHHHHHHHTCHH-HHHHHHHT------TCCTTCCCTTSCCHHHHCC---CHHHHHHH
T ss_pred ------------CCcCCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCCCCcCCCCCCHHHHhC---CHHHHHHh
Confidence 6788999999999999998776 99999875 4788999999999999994 45555554
No 53
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.82 E-value=6.9e-21 Score=174.74 Aligned_cols=124 Identities=26% Similarity=0.206 Sum_probs=104.5
Q ss_pred ccchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhH
Q 002922 587 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQK 666 (865)
Q Consensus 587 R~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k 666 (865)
...++||+|+..|+.++++.||+.+++.+ ..+..|+||||+|+..|+.++|++||++|++
T Consensus 9 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~----------- 68 (137)
T 3c5r_A 9 RGETLLHIASIKGDIPSVEYLLQNGSDPN---------VKDHAGWTPLHEACNHGHLKVVELLLQHKAL----------- 68 (137)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTCCSC---------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-----------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCC---------cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCc-----------
Confidence 45699999999999999999999875432 2356799999999999999999999999864
Q ss_pred HHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHH
Q 002922 667 QLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLV 746 (865)
Q Consensus 667 ~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL 746 (865)
+|.+|..|+||||+|+..++.+ ++++|++. ++++|.+|.+|+||||+|+..++.+++++|
T Consensus 69 -------------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~------ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l 128 (137)
T 3c5r_A 69 -------------VNTTGYQNDSPLHDAAKNGHVD-IVKLLLSY------GASRNAVNIFGLRPVDYTDDESMKSLLLLP 128 (137)
T ss_dssp -------------TTCCCGGGCCHHHHHHHTTCHH-HHHHHHHT------TCCTTCCCTTSCCGGGGCCCHHHHHHHSCC
T ss_pred -------------ccCcCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCCCCCCCCCCCHHHHHhhccHHHHHhhc
Confidence 5778889999999999998776 99999875 478899999999999999999988888877
Q ss_pred HHhh
Q 002922 747 QRKI 750 (865)
Q Consensus 747 ~~K~ 750 (865)
.+..
T Consensus 129 ~~~~ 132 (137)
T 3c5r_A 129 EKNE 132 (137)
T ss_dssp ----
T ss_pred cccc
Confidence 6653
No 54
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.81 E-value=5.1e-20 Score=187.19 Aligned_cols=135 Identities=16% Similarity=0.073 Sum_probs=109.4
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCC-----CCchHHhhccccHHHHHHHcCCHHHHHHHHh---cCCCCCCC
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGD-----HTSSELAILEMGLLHKAVRRNCRPMVELLLN---YAPDNVLD 659 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~-----~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~---~Gadi~~d 659 (865)
..++||+|+..|+.+++++||+.+++.+....+ ......+..|.||||+|+.+|+.++|++||+ +|+
T Consensus 101 g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga----- 175 (273)
T 2pnn_A 101 GQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPA----- 175 (273)
T ss_dssp TCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCC-----
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCC-----
Confidence 569999999999999999999997654331000 0000011259999999999999999999999 765
Q ss_pred CCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCCh--------HHHHHHhhcCCCCCCcccccc-------ccC
Q 002922 660 KPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDA--------ENVLDALTDDPGSVGIEAWKS-------AQD 724 (865)
Q Consensus 660 g~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~--------e~IVelLL~dp~~Ig~gA~VN-------akD 724 (865)
++|.+|..|+||||+|+..++. .+++++|++. ||++| .+|
T Consensus 176 -------------------d~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~------ga~~n~~~~~~~~~d 230 (273)
T 2pnn_A 176 -------------------DISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILIL------GAKLHPTLKLEEITN 230 (273)
T ss_dssp -------------------CTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHH------HHHHCTTCCGGGCCC
T ss_pred -------------------CceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHh------hhhcccccccccccC
Confidence 4688999999999999998762 3499999764 57776 599
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHHhhhh
Q 002922 725 STGLTPNDYASLRAHHSYIHLVQRKINK 752 (865)
Q Consensus 725 ~~G~TPLHyAa~rGn~eiIeLL~~K~~~ 752 (865)
.+|+||||+|+.+|+.+++++|+++.++
T Consensus 231 ~~g~TpL~~A~~~g~~~iv~~Ll~~ga~ 258 (273)
T 2pnn_A 231 RKGLTPLALAASSGKIGVLAYILQREIH 258 (273)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHhChHHHHHHHHHCCCC
Confidence 9999999999999999999999999884
No 55
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.81 E-value=3.2e-20 Score=177.66 Aligned_cols=127 Identities=22% Similarity=0.166 Sum_probs=112.3
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHH
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 667 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~ 667 (865)
..++||+|+..|+.+++++||+.+++.+ ..+..|.||||+|+..|+.++|++||++|++
T Consensus 39 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------ 97 (179)
T 3f6q_A 39 GFSPLHWACREGRSAVVEMLIMRGARIN---------VMNRGDDTPLHLAASHGHRDIVQKLLQYKAD------------ 97 (179)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCTT---------CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC------------
T ss_pred CCCHHHHHHHcCcHHHHHHHHHcCCCCC---------CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------
Confidence 4589999999999999999999875432 2356799999999999999999999999864
Q ss_pred HHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHH
Q 002922 668 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQ 747 (865)
Q Consensus 668 LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~ 747 (865)
+|.+|..|.||||+|+..++.+ ++++|++. +|+++.+|..|+||||+|+..++.+++++|.
T Consensus 98 ------------~~~~d~~g~t~L~~A~~~~~~~-~v~~Ll~~------ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~ 158 (179)
T 3f6q_A 98 ------------INAVNEHGNVPLHYACFWGQDQ-VAEDLVAN------GALVSICNKYGEMPVDKAKAPLRELLRERAE 158 (179)
T ss_dssp ------------TTCCCTTSCCHHHHHHHTTCHH-HHHHHHHT------TCCSSBCCTTSCCGGGGSCHHHHHHHHHHHH
T ss_pred ------------CCccCCCCCCHHHHHHHcCCHH-HHHHHHHC------CCCcchhccCCCCcHHHHHHHHHHHHHHHHH
Confidence 5788999999999999998766 99999875 4788999999999999999999999999999
Q ss_pred HhhhhcC
Q 002922 748 RKINKKS 754 (865)
Q Consensus 748 ~K~~~~~ 754 (865)
++..+..
T Consensus 159 ~~g~~~~ 165 (179)
T 3f6q_A 159 KMGQNLN 165 (179)
T ss_dssp HTTCCCS
T ss_pred HhhcCcc
Confidence 9877654
No 56
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.81 E-value=2.1e-20 Score=184.63 Aligned_cols=129 Identities=9% Similarity=-0.036 Sum_probs=108.1
Q ss_pred cchHHHHHHHCCCH----HHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCC------HHHHHHHHhcCCCCC
Q 002922 588 FKWLLEFSMEHDWC----AVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNC------RPMVELLLNYAPDNV 657 (865)
Q Consensus 588 ~~tLL~fAverg~~----aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn------~eIVELLL~~Gadi~ 657 (865)
.+++||+|+.+|+. +++++||+.+++.+. .+..|+||||+|+..++ .+||++||++|+|
T Consensus 38 g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~---------~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gad-- 106 (186)
T 3t8k_A 38 KSNILYDVLRNNNDEARYKISMFLINKGADIKS---------RTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGAD-- 106 (186)
T ss_dssp TTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSC---------CCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCC--
T ss_pred CCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCC---------CCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCC--
Confidence 46999999999975 599999998865332 35679999999999987 6889999999875
Q ss_pred CCCCchhhHHHHhhhcCCcccCCcccCCCCc-hHHHHHHhcCC----hHHHHHHhhcCCCCCCccccccccCCCCCCHHH
Q 002922 658 LDKPGSRQKQLVDRAGSGFIFKPNVIGPAGL-TPLHVAACRDD----AENVLDALTDDPGSVGIEAWKSAQDSTGLTPND 732 (865)
Q Consensus 658 ~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~-TPLHlAA~~~~----~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLH 732 (865)
+|++|..|+ ||||+|+..+. ..+++++|++. .||++|++|..|+||||
T Consensus 107 ----------------------in~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~-----~gad~~~~d~~G~TpL~ 159 (186)
T 3t8k_A 107 ----------------------ITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQ-----SGLQLLIKDKWGLTALE 159 (186)
T ss_dssp ----------------------SSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTS-----TTCCTTCCCTTSCCHHH
T ss_pred ----------------------CCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHh-----cCCCCcccCCCCCCHHH
Confidence 688999999 99999998532 23489999861 35899999999999999
Q ss_pred HHHHcCCHHHHHHHHHhhhhcC
Q 002922 733 YASLRAHHSYIHLVQRKINKKS 754 (865)
Q Consensus 733 yAa~rGn~eiIeLL~~K~~~~~ 754 (865)
||+..|+.+++++|..++.+..
T Consensus 160 ~A~~~~~~~~v~~L~~~~~~~~ 181 (186)
T 3t8k_A 160 FVKRCQKPIALKMMEDYIKKYN 181 (186)
T ss_dssp HHHTTTCHHHHHHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHHHHHHh
Confidence 9999999999999998876544
No 57
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.81 E-value=1.1e-19 Score=192.17 Aligned_cols=130 Identities=14% Similarity=0.094 Sum_probs=114.0
Q ss_pred cchHHHHHHHCC--CHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhh
Q 002922 588 FKWLLEFSMEHD--WCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQ 665 (865)
Q Consensus 588 ~~tLL~fAverg--~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~ 665 (865)
..++||+|+..| +.+++++||+.+++.+ ..+..|+||||+|+..|+.++|++||++|++..
T Consensus 138 g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~---------~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-------- 200 (364)
T 3ljn_A 138 GQTALHWCVGLGPEYLEMIKILVQLGASPT---------AKDKADETPLMRAMEFRNREALDLMMDTVPSKS-------- 200 (364)
T ss_dssp CCCHHHHHHHSCGGGHHHHHHHHHHTCCTT---------CCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSS--------
T ss_pred CCCHHHHHHHcCCchHHHHHHHHHcCCCCc---------ccCCCCCCHHHHHHHcCCHHHHHHHHhcccccc--------
Confidence 469999999999 9999999999975432 235679999999999999999999999997621
Q ss_pred HHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHH
Q 002922 666 KQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHL 745 (865)
Q Consensus 666 k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeL 745 (865)
..++|.+|..|+||||+||.+++.+ +|++|++. ||++|.+|.+|+||||+|+.+|+.+++++
T Consensus 201 -----------~~~~~~~~~~g~t~L~~A~~~g~~~-~v~~Ll~~------gad~~~~d~~g~tpL~~A~~~g~~~~v~~ 262 (364)
T 3ljn_A 201 -----------SLRLDYANKQGNSHLHWAILINWED-VAMRFVEM------GIDVNMEDNEHTVPLYLSVRAAMVLLTKE 262 (364)
T ss_dssp -----------SCCTTCCCTTCCCTTHHHHTTTCHH-HHHHHHTT------TCCTTCCCTTSCCHHHHHHHTCCHHHHHH
T ss_pred -----------cccccccCCCCCcHHHHHHHcCCHH-HHHHHHHc------CCCCCCCCCCCCCHHHHHHHhChHHHHHH
Confidence 2357899999999999999998766 99999874 58899999999999999999999999999
Q ss_pred HHHhhhh
Q 002922 746 VQRKINK 752 (865)
Q Consensus 746 L~~K~~~ 752 (865)
|+++.++
T Consensus 263 Ll~~~~~ 269 (364)
T 3ljn_A 263 LLQKTDV 269 (364)
T ss_dssp HHHHSCH
T ss_pred HHHcCCc
Confidence 9998654
No 58
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.81 E-value=1.4e-19 Score=186.66 Aligned_cols=162 Identities=19% Similarity=0.126 Sum_probs=124.3
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch-
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS- 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~- 663 (865)
.+++||+|+..|+.+++++||+.+++.+ ..+..|+||||+|+..|+.+||++||++|++++. + +..+
T Consensus 58 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L 128 (351)
T 3utm_A 58 KSTPLHLAAGYNRVRIVQLLLQHGADVH---------AKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPL 128 (351)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTT---------CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCC---------ccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHH
Confidence 4699999999999999999999875432 2356799999999999999999999999998773 2 3222
Q ss_pred ------hhHHHHhhhcCCcccCCccc------------------------------------------------------
Q 002922 664 ------RQKQLVDRAGSGFIFKPNVI------------------------------------------------------ 683 (865)
Q Consensus 664 ------~~k~LV~~~s~~y~~d~Na~------------------------------------------------------ 683 (865)
+..++++.+.. ++++++..
T Consensus 129 ~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 207 (351)
T 3utm_A 129 HEAASKNRVEVCSLLLS-HGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQ 207 (351)
T ss_dssp HHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCC
T ss_pred HHHHHcCCHHHHHHHHH-cCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccC
Confidence 23344442211 13455543
Q ss_pred CCCCchHHHHHHhcCC--hHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh---cCCCCC
Q 002922 684 GPAGLTPLHVAACRDD--AENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK---KSSESG 758 (865)
Q Consensus 684 d~~G~TPLHlAA~~~~--~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~---~~~~~~ 758 (865)
+..|.||||+|+..++ ..+++++|++. ++++|.+|.+|+||||+|+.+|+.+++++|+++..+ +. ..|
T Consensus 208 ~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~------g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d-~~g 280 (351)
T 3utm_A 208 PQSHETALHCAVASLHPKRKQVAELLLRK------GANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALD-SLG 280 (351)
T ss_dssp TTTCCCHHHHHHHCCSTTHHHHHHHHHHT------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTS
T ss_pred CCCCCCHHHHHHHHhCccHHHHHHHHHHc------CCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcC-CCC
Confidence 3567899999998743 35599999875 478899999999999999999999999999998554 33 567
Q ss_pred ceEeecCC
Q 002922 759 RVILDIPG 766 (865)
Q Consensus 759 ~v~l~i~~ 766 (865)
.++|+++-
T Consensus 281 ~t~L~~A~ 288 (351)
T 3utm_A 281 QTALHRAA 288 (351)
T ss_dssp CCHHHHHH
T ss_pred CCHHHHHH
Confidence 78888763
No 59
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.81 E-value=1.3e-19 Score=184.17 Aligned_cols=159 Identities=13% Similarity=-0.004 Sum_probs=126.0
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch--
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS-- 663 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~-- 663 (865)
.++||+|+..|+.++++.||+.+++.+ ..+..|.||||+|+..|+.++|++||++|++++. + +..+
T Consensus 4 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 74 (261)
T 2xai_A 4 WSPMHEAAIHGHQLSLRNLISQGWAVN---------IITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLF 74 (261)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSS---------CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCC---------CcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHH
Confidence 589999999999999999999875432 2356799999999999999999999999998873 2 3222
Q ss_pred -----hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcC
Q 002922 664 -----RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRA 738 (865)
Q Consensus 664 -----~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rG 738 (865)
+..++++.... ++++++. +..|.||||+|+..++.+ ++++|++. ++++|.+|.+|.||||+|+.+|
T Consensus 75 ~A~~~~~~~~v~~Ll~-~g~~~~~-~~~g~t~L~~A~~~~~~~-~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~ 145 (261)
T 2xai_A 75 NACVSGSWDCVNLLLQ-HGASVQP-ESDLASPIHEAARRGHVE-CVNSLIAY------GGNIDHKISHLGTPLYLACENQ 145 (261)
T ss_dssp HHHHHTCHHHHHHHHH-TTCCSSC-SCTTCCHHHHHHHTTCHH-HHHHHHHT------TCCTTCCBTTTBCHHHHHHHTT
T ss_pred HHHHcCCHHHHHHHHH-CCCCCCC-CCCCCCHHHHHHHcCcHH-HHHHHHHc------CCCCCcCCCCCCCHHHHHHHhC
Confidence 23344442211 2456664 455999999999998776 99999875 4788999999999999999999
Q ss_pred CHHHHHHHHHhhhhcC-CCCCceEeecC
Q 002922 739 HHSYIHLVQRKINKKS-SESGRVILDIP 765 (865)
Q Consensus 739 n~eiIeLL~~K~~~~~-~~~~~v~l~i~ 765 (865)
+.+++++|+++..+.. ..+|.++|+++
T Consensus 146 ~~~~v~~Ll~~g~~~~~~~~g~t~Lh~A 173 (261)
T 2xai_A 146 QRACVKKLLESGADVNQGKGQDSPLHAV 173 (261)
T ss_dssp CHHHHHHHHHHTCCTTCCBTTBCHHHHH
T ss_pred CHHHHHHHHHcCCCCCCCCCCCChHHHH
Confidence 9999999999865421 14788888887
No 60
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.81 E-value=1.8e-19 Score=180.07 Aligned_cols=162 Identities=15% Similarity=0.074 Sum_probs=102.9
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCC--------
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLD-------- 659 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~d-------- 659 (865)
..++||+|+..|+.+++++|++.+++.+ ..+..|+||||+|+.+|+.+++++|+++|++.+..
T Consensus 72 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~ 142 (285)
T 1wdy_A 72 GATPFLLAAIAGSVKLLKLFLSKGADVN---------ECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQE 142 (285)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTCCTT---------CBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCC---------ccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHH
Confidence 3578888888888888888887764322 22445777777777777777777777777765421
Q ss_pred -----CCch-------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCCh---HHHHHHhhcCCCCCCccccccccC
Q 002922 660 -----KPGS-------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDA---ENVLDALTDDPGSVGIEAWKSAQD 724 (865)
Q Consensus 660 -----g~~~-------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~---e~IVelLL~dp~~Ig~gA~VNakD 724 (865)
+..+ +..++++.....+++++|.+|..|+||||+|+..++. .+++++|++. ++++|.+|
T Consensus 143 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~------g~~~~~~~ 216 (285)
T 1wdy_A 143 RLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDH------GADVNVRG 216 (285)
T ss_dssp HTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHT------TCCSSCCC
T ss_pred hhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHc------CCCCCCcC
Confidence 1111 2334444333334566777777777777777776551 3377777654 36667777
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHH-hh---hhcCCCCCceEeecC
Q 002922 725 STGLTPNDYASLRAHHSYIHLVQR-KI---NKKSSESGRVILDIP 765 (865)
Q Consensus 725 ~~G~TPLHyAa~rGn~eiIeLL~~-K~---~~~~~~~~~v~l~i~ 765 (865)
.+|+||||+|+.+|+.+++++|++ +. +.+. .+|.++|+++
T Consensus 217 ~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~-~~g~t~l~~A 260 (285)
T 1wdy_A 217 ERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTD-SDGKTALLLA 260 (285)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCC-TTSCCHHHHH
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHhccCCCccccC-CCCCcHHHHH
Confidence 777777777777777777777776 32 2233 3455555554
No 61
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.81 E-value=1.9e-19 Score=187.91 Aligned_cols=139 Identities=20% Similarity=0.145 Sum_probs=116.5
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHc---CCHHHHHHHHhcCCCCCCCCCchhh
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRR---NCRPMVELLLNYAPDNVLDKPGSRQ 665 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~---gn~eIVELLL~~Gadi~~dg~~~~~ 665 (865)
-..|+.|+..|....++.+++.+++.+... .....+..|+||||+|+.. ++.++|++||++|++
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~---~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~---------- 197 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKI---PLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN---------- 197 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBC---CCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSC----------
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhc---cccccccCCCCcchHHHHhcccchHHHHHHHHHCCCC----------
Confidence 368999999999999999999876533210 0112255699999999999 999999999999864
Q ss_pred HHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHH
Q 002922 666 KQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHL 745 (865)
Q Consensus 666 k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeL 745 (865)
+|.+|..|+||||+||..++.+ +|++|++. ||++|++|.+|+||||+|+..|+.+++++
T Consensus 198 --------------in~~d~~g~TpLh~A~~~g~~~-~v~~Ll~~------gad~~~~d~~g~tpL~~A~~~~~~~~v~~ 256 (278)
T 1dcq_A 198 --------------LDKQTGKGSTALHYCCLTDNAE-CLKLLLRG------KASIEIANESGETPLDIAKRLKHEHCEEL 256 (278)
T ss_dssp --------------TTCCCTTCCCHHHHHHHTTCHH-HHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred --------------ccccCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCCCCccCCCCCHHHHHHHcCCHHHHHH
Confidence 6788999999999999998776 99999874 58899999999999999999999999999
Q ss_pred HHHhhhhcCCCCCceEee
Q 002922 746 VQRKINKKSSESGRVILD 763 (865)
Q Consensus 746 L~~K~~~~~~~~~~v~l~ 763 (865)
|+++.+++. +.|+.+.
T Consensus 257 Ll~~ga~~~--~~~~~v~ 272 (278)
T 1dcq_A 257 LTQALSGRF--NSHVHVE 272 (278)
T ss_dssp HHHHHTTCC--CSSCCCC
T ss_pred HHHcCCCCC--Ccceeee
Confidence 999988766 5554443
No 62
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.81 E-value=5.7e-20 Score=182.55 Aligned_cols=132 Identities=19% Similarity=0.116 Sum_probs=112.3
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHH
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 667 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~ 667 (865)
..++||+|+..|+.++++.|++.+.+.+.. ......+..|.||||+|+.+|+.++|++||++|++
T Consensus 78 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------ 142 (236)
T 1ikn_D 78 GNTPLHLACEQGCLASVGVLTQSCTTPHLH---SILKATNYNGHTCLHLASIHGYLGIVELLVSLGAD------------ 142 (236)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHSTTTTSSS---CGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCC------------
T ss_pred CCCHHHHHHHcCCHHHHHHHHhcccchhHH---HHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------
Confidence 469999999999999999999987543221 01122355699999999999999999999999864
Q ss_pred HHhhhcCCcccCCcccCC-CCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHH
Q 002922 668 LVDRAGSGFIFKPNVIGP-AGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLV 746 (865)
Q Consensus 668 LV~~~s~~y~~d~Na~d~-~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL 746 (865)
+|.++. .|+||||+|+..++.+ +|++|++. ||++|.+|..|+||||+|+.+|+.+++++|
T Consensus 143 ------------~~~~~~~~g~tpL~~A~~~~~~~-~v~~Ll~~------ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L 203 (236)
T 1ikn_D 143 ------------VNAQEPCNGRTALHLAVDLQNPD-LVSLLLKC------GADVNRVTYQGYSPYQLTWGRPSTRIQQQL 203 (236)
T ss_dssp ------------TTCCCTTTCCCHHHHHHHTTCHH-HHHHHHTT------TCCSCCCCTTCCCGGGGCTTSSCHHHHHHH
T ss_pred ------------CCCCCCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCCCcccCCCCCHHHHHHccCchHHHHHH
Confidence 567777 8999999999998776 99999874 588999999999999999999999999999
Q ss_pred HHhhhhc
Q 002922 747 QRKINKK 753 (865)
Q Consensus 747 ~~K~~~~ 753 (865)
+++.++.
T Consensus 204 l~~ga~~ 210 (236)
T 1ikn_D 204 GQLTLEN 210 (236)
T ss_dssp HTTSCGG
T ss_pred HHcchhh
Confidence 9987753
No 63
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.81 E-value=3.7e-20 Score=195.79 Aligned_cols=160 Identities=18% Similarity=0.103 Sum_probs=111.4
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-CCCch----
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-DKPGS---- 663 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-dg~~~---- 663 (865)
.++||+|+..|+.+++++||+.+++.+ ..+..|.||||+|+..|+.+||++||++|++.+. ++..+
T Consensus 21 ~t~L~~Aa~~g~~~~v~~Ll~~g~~~~---------~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A 91 (364)
T 3ljn_A 21 MEKIHVAARKGQTDEVRRLIETGVSPT---------IQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLWHGQKPIHLA 91 (364)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCTT---------CCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCBTTBCHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCcc---------ccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCHHHHH
Confidence 589999999999999999998875432 2355788999999999999999999999986653 33321
Q ss_pred ---h----hHHHHhhhcCCcccCC-----------------cccCCCCchHHHHHHhcC--ChHHHHHHhhcCCCCCCcc
Q 002922 664 ---R----QKQLVDRAGSGFIFKP-----------------NVIGPAGLTPLHVAACRD--DAENVLDALTDDPGSVGIE 717 (865)
Q Consensus 664 ---~----~k~LV~~~s~~y~~d~-----------------Na~d~~G~TPLHlAA~~~--~~e~IVelLL~dp~~Ig~g 717 (865)
+ .+.|++... ..+.++ +.+|..|.||||+|+..+ +.+ +|++|++. +
T Consensus 92 ~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~-~v~~Ll~~------g 163 (364)
T 3ljn_A 92 VMANKTDLVVALVEGAK-ERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLE-MIKILVQL------G 163 (364)
T ss_dssp HHTTCHHHHHHHHHHHH-HHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHH-HHHHHHHH------T
T ss_pred HHcCCHHHHHHHHHhcc-ccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHH-HHHHHHHc------C
Confidence 1 222222100 001222 337777888888888876 444 88888763 4
Q ss_pred ccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh--------cCCCCCceEeecCC
Q 002922 718 AWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK--------KSSESGRVILDIPG 766 (865)
Q Consensus 718 A~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~--------~~~~~~~v~l~i~~ 766 (865)
|++|.+|..|+||||+|+.+|+.+++++|+++..+ +. ..|.++|+++.
T Consensus 164 a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~-~~g~t~L~~A~ 219 (364)
T 3ljn_A 164 ASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYAN-KQGNSHLHWAI 219 (364)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCC-TTCCCTTHHHH
T ss_pred CCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccC-CCCCcHHHHHH
Confidence 67788888888888888888888888888876433 33 46677777663
No 64
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.80 E-value=2.7e-19 Score=175.06 Aligned_cols=150 Identities=21% Similarity=0.115 Sum_probs=106.9
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch--
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS-- 663 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~-- 663 (865)
.++||+|+..|+.++++.|++.+.. +++ ..+..|.||||+|+..++.+++++|+++|++++. + +..+
T Consensus 59 ~t~L~~A~~~~~~~~v~~Ll~~~~~-~~~-------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~ 130 (223)
T 2f8y_A 59 RTPLHAAVSADAQGVFQILIRNRAT-DLD-------ARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALH 130 (223)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHBTTS-CTT-------CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCC-Ccc-------cCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHH
Confidence 4677777777777777777765431 111 1234566777777777777777777777766552 2 2211
Q ss_pred -----hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcC
Q 002922 664 -----RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRA 738 (865)
Q Consensus 664 -----~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rG 738 (865)
+..++++.... +++++|.+|..|.||||+|+..++.+ ++++|++. +|+++.+|..|.||||+|+.+|
T Consensus 131 ~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~------ga~~~~~~~~g~t~l~~A~~~~ 202 (223)
T 2f8y_A 131 WAAAVNNVDAAVVLLK-NGANKDMQNNREETPLFLAAREGSYE-TAKVLLDH------FANRDITDHMDRLPRDIAQERM 202 (223)
T ss_dssp HHHHTTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHHTCHH-HHHHHHHT------TCCTTCCCTTCCCHHHHHHHTT
T ss_pred HHHHcCCHHHHHHHHH-cCCCCCCcCCCCcCHHHHHHHcCCHH-HHHHHHHc------CCCCccccccCCCHHHHHHHhc
Confidence 22333332211 14578999999999999999998776 99999875 4788999999999999999999
Q ss_pred CHHHHHHHHHhhhhcC
Q 002922 739 HHSYIHLVQRKINKKS 754 (865)
Q Consensus 739 n~eiIeLL~~K~~~~~ 754 (865)
+.+++++|.++..++.
T Consensus 203 ~~~i~~~L~~~g~~~~ 218 (223)
T 2f8y_A 203 HHDIVRLLDEYNLVRS 218 (223)
T ss_dssp CHHHHHHHHHTTCSSC
T ss_pred chHHHHHHHHcCCCcc
Confidence 9999999999877644
No 65
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.80 E-value=1.7e-19 Score=155.95 Aligned_cols=92 Identities=32% Similarity=0.332 Sum_probs=82.8
Q ss_pred ccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhh
Q 002922 629 LEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALT 708 (865)
Q Consensus 629 ~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL 708 (865)
.|+||||+|++.|+.++|++||++|++ +|.+|..|+||||+|+..++.+ ++++|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------------------~n~~d~~g~t~L~~A~~~~~~~-~v~~Ll 55 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD------------------------VNAKDKNGRTPLHLAARNGHLE-VVKLLL 55 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCC------------------------TTCCCTTSCCHHHHHHHTTCHH-HHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCC------------------------CcccCCCCCCHHHHHHHcCCHH-HHHHHH
Confidence 378999999999999999999999864 6788999999999999998776 999998
Q ss_pred cCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhh
Q 002922 709 DDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKIN 751 (865)
Q Consensus 709 ~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~ 751 (865)
+. ++++|.+|.+|+||||+|+..|+.+++++|+++.+
T Consensus 56 ~~------ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 56 EA------GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92 (93)
T ss_dssp HT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred Hc------CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 75 57889999999999999999999999999998765
No 66
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.80 E-value=2e-19 Score=176.81 Aligned_cols=148 Identities=18% Similarity=0.076 Sum_probs=121.7
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch-
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS- 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~- 663 (865)
..++||+|+..|+.++++.|++.+++.+ ..+..|.||||+|+.+++.+++++|+++|++++. + +..+
T Consensus 73 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L 143 (231)
T 3aji_A 73 GWSPLHIAASAGXDEIVKALLVKGAHVN---------AVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAM 143 (231)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCTT---------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CCCHHHHHHHcCHHHHHHHHHHcCCCCC---------CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHH
Confidence 4589999999999999999999875432 2255799999999999999999999999998763 2 2222
Q ss_pred ------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHc
Q 002922 664 ------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLR 737 (865)
Q Consensus 664 ------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~r 737 (865)
+..++++.... +++++|.+|..|+||||+|+..++.+ ++++|++. ||++|.+|..|+||||+|+.+
T Consensus 144 ~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~------ga~~~~~~~~g~t~l~~A~~~ 215 (231)
T 3aji_A 144 HRAAAKGNLKMVHILLF-YKASTNIQDTEGNTPLHLACDEERVE-EAKFLVTQ------GASIYIENKEEKTPLQVAKGG 215 (231)
T ss_dssp HHHHHHTCHHHHHHHHH-TTCCSCCCCTTSCCHHHHHHHTTCHH-HHHHHHHT------TCCSCCCCTTSCCHHHHSCHH
T ss_pred HHHHHcCCHHHHHHHHh-cCCCccccCCCCCCHHHHHHHCCCHH-HHHHHHHC------CCCCCCCCCCCCCHHHHHHhh
Confidence 33445553221 36789999999999999999998776 99999875 478899999999999999999
Q ss_pred CCHHHHHHHHHhhhh
Q 002922 738 AHHSYIHLVQRKINK 752 (865)
Q Consensus 738 Gn~eiIeLL~~K~~~ 752 (865)
++.+++++|+++.++
T Consensus 216 ~~~~i~~lL~~~~a~ 230 (231)
T 3aji_A 216 LGLILKRLAEGEEAS 230 (231)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcccccc
Confidence 999999999987653
No 67
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.80 E-value=1.1e-19 Score=183.99 Aligned_cols=135 Identities=20% Similarity=0.115 Sum_probs=113.9
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHH
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 668 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~L 668 (865)
.++||+|+..|..++++.||+.+++.+ ..+..|+||||+|+..|+.+||++||++|++
T Consensus 22 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~---------~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~------------- 79 (229)
T 2vge_A 22 LVLLLDAALTGELEVVQQAVKEMNDPS---------QPNEEGITALHNAICGANYSIVDFLITAGAN------------- 79 (229)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHSSCTT---------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-------------
T ss_pred hHHHHHHHHcCCHHHHHHHHhcCCCCC---------CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-------------
Confidence 489999999999999999999875432 2356799999999999999999999999864
Q ss_pred HhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccC-CCCCCHHHHH--HHcCCHHHHHH
Q 002922 669 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQD-STGLTPNDYA--SLRAHHSYIHL 745 (865)
Q Consensus 669 V~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD-~~G~TPLHyA--a~rGn~eiIeL 745 (865)
+|.+|..|+||||+|+..++.+ ++++|++. ++++|.+| .+|+||||+| +..|+.+++++
T Consensus 80 -----------~n~~d~~g~tpLh~A~~~g~~~-~v~~Ll~~------ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~ 141 (229)
T 2vge_A 80 -----------VNSPDSHGWTPLHCAASCNDTV-ICMALVQH------GAAIFATTLSDGATAFEKCDPYREGYADCATY 141 (229)
T ss_dssp -----------TTCCCTTCCCHHHHHHHTTCHH-HHHHHHTT------TCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHH
T ss_pred -----------CCCCCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCcccccCCCCCCHHHHHHHHhcChHHHHHH
Confidence 6788999999999999998776 99999875 57889997 5999999999 99999999999
Q ss_pred HHHhhhhcCC--CCCceEee
Q 002922 746 VQRKINKKSS--ESGRVILD 763 (865)
Q Consensus 746 L~~K~~~~~~--~~~~v~l~ 763 (865)
|+++.++... .++.+.+.
T Consensus 142 Ll~~ga~~~~~~~~~~~~l~ 161 (229)
T 2vge_A 142 LADVEQSMGLMNSGAVYALW 161 (229)
T ss_dssp HHHHHHHTTTSGGGEEEESS
T ss_pred HHHcCCCcccccCCchHHHH
Confidence 9998665320 23445554
No 68
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.80 E-value=8e-20 Score=184.06 Aligned_cols=136 Identities=18% Similarity=0.127 Sum_probs=77.2
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHH
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 668 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~L 668 (865)
.++||.|+..|..++++.||+.+++.++ +..|.||||.|+..|+.++|++||++|++
T Consensus 6 ~t~L~~a~~~~~~~~~~~ll~~g~~~~~----------~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~------------- 62 (239)
T 1ycs_B 6 QVSLPPGKRTNLRKTGSERIAHGMRVKF----------NPLPLALLLDSSLEGEFDLVQRIIYEVDD------------- 62 (239)
T ss_dssp -----------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSS-------------
T ss_pred cccCchhhhhhhHHHHHHHhccCCCccc----------CchhhHHHHHHHHcCCHHHHHHHHHcCCC-------------
Confidence 5788899988888889999888754332 23578899999999999999999988754
Q ss_pred HhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002922 669 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQR 748 (865)
Q Consensus 669 V~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~ 748 (865)
+|.+|..|+||||+||..++.+ +|++|++. ++++|.+|.+|+||||+|+.+|+.+++++|++
T Consensus 63 -----------~~~~d~~g~t~L~~A~~~g~~~-~v~~Ll~~------ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~ 124 (239)
T 1ycs_B 63 -----------PSLPNDEGITALHNAVCAGHTE-IVKFLVQF------GVNVNAADSDGWTPLHCAASCNNVQVCKFLVE 124 (239)
T ss_dssp -----------CCCCCTTSCCHHHHHHHHTCHH-HHHHHHHH------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred -----------CCCcCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 5667777888888888776655 77777653 46777888888888888888888888887777
Q ss_pred hhhhcCC--CCCc-eEeecC
Q 002922 749 KINKKSS--ESGR-VILDIP 765 (865)
Q Consensus 749 K~~~~~~--~~~~-v~l~i~ 765 (865)
+.++... .++. +.|+++
T Consensus 125 ~ga~~~~~~~~~~~t~l~~a 144 (239)
T 1ycs_B 125 SGAAVFAMTYSDMQTAADKC 144 (239)
T ss_dssp TTCCTTCCCSSSCCCHHHHC
T ss_pred cCCCcceecCCCCcchHHHH
Confidence 7554210 2233 666665
No 69
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.80 E-value=6.7e-19 Score=173.38 Aligned_cols=165 Identities=21% Similarity=0.164 Sum_probs=126.4
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch-
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS- 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~- 663 (865)
..++||+|+.+|+.++++.|++.+..... +.+..+..|+||||+|+..|+.++|++|+++|++.+. + +..+
T Consensus 9 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~-----~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l 83 (241)
T 1k1a_A 9 GDTPLHIAVVQGNLPAVHRLVNLFQQGGR-----ELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAA 83 (241)
T ss_dssp TCCHHHHHHHTTCHHHHHHHHHHHHHTTC-----CSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHHHHhcCC-----CCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHH
Confidence 46999999999999999999985432211 2223356799999999999999999999999998763 2 2221
Q ss_pred ------hhHHHHhhh-cC--CcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccC-CCCCCHHHH
Q 002922 664 ------RQKQLVDRA-GS--GFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQD-STGLTPNDY 733 (865)
Q Consensus 664 ------~~k~LV~~~-s~--~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD-~~G~TPLHy 733 (865)
+...+++.. .. ...++++..+..|+||||+|+..++.+ ++++|++. +++++.+| ..|.||||+
T Consensus 84 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~-~~~~Ll~~------g~~~~~~~~~~g~t~L~~ 156 (241)
T 1k1a_A 84 HLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQE-TVQLLLER------GADIDAVDIKSGRSPLIH 156 (241)
T ss_dssp HHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHH-HHHHHHHT------TCCTTCCCTTTCCCHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHH-HHHHHHHc------CCCcccccccCCCcHHHH
Confidence 222233311 11 112478899999999999999998766 99999875 47789998 889999999
Q ss_pred HHHcCCHHHHHHHHHhhhh---cCCCCCceEeecC
Q 002922 734 ASLRAHHSYIHLVQRKINK---KSSESGRVILDIP 765 (865)
Q Consensus 734 Aa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~ 765 (865)
|+.+|+.+++++|+++..+ +. .+|.++|+++
T Consensus 157 A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A 190 (241)
T 1k1a_A 157 AVENNSLSMVQLLLQHGANVNAQM-YSGSSALHSA 190 (241)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCBC-TTSCBHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcC-CCCCCHHHHH
Confidence 9999999999999998554 33 5678888876
No 70
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.80 E-value=4.3e-19 Score=185.69 Aligned_cols=164 Identities=21% Similarity=0.126 Sum_probs=117.7
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-CC--Cch--
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-DK--PGS-- 663 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-dg--~~~-- 663 (865)
.++||.|+++|+.++|++||+.+++.|.. .+..|+||||+||++|+.+||++||++|++++. +. ..+
T Consensus 26 ~t~L~~Av~~g~~~~V~~LL~~Gadvn~~--------~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~ 97 (337)
T 4g8k_A 26 NHLLIKAVQNEDVDLVQQLLEGGANVNFQ--------EEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFI 97 (337)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHTCCTTCC--------CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHH
T ss_pred ChHHHHHHHcCCHHHHHHHHHCCCCCCcc--------CCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhH
Confidence 58999999999999999999998654321 023589999999999999999999999998773 21 111
Q ss_pred -----hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCc----cccccccCCCCCCHHHHH
Q 002922 664 -----RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGI----EAWKSAQDSTGLTPNDYA 734 (865)
Q Consensus 664 -----~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~----gA~VNakD~~G~TPLHyA 734 (865)
....++... ..+..++|.+|..|+||||+|+..++.+ ++++|++.++.+.. ..+.+..|..|.||||+|
T Consensus 98 ~~~~~~~~~~~~~~-~~~~~~~~~~d~~g~t~l~~A~~~~~~~-~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A 175 (337)
T 4g8k_A 98 LAAIAGSVKLLKLF-LSKGADVNECDFYGFTAFMEAAVYGKVK-ALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDA 175 (337)
T ss_dssp HHHHHTCHHHHHHH-HTTTCCTTCBCTTCCBHHHHHHHTTCHH-HHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHH
T ss_pred HHHhcccchhhHHh-hhccchhhhhccCCCCHHHHHHHcCcHH-HHHHHHHcCCCcchhhccccccccccCCCCcHHHHH
Confidence 111112211 1225689999999999999999998766 99999876532211 112234566799999999
Q ss_pred HHcCCHHHHHHHHHh-hh---hcCCCCCceEee
Q 002922 735 SLRAHHSYIHLVQRK-IN---KKSSESGRVILD 763 (865)
Q Consensus 735 a~rGn~eiIeLL~~K-~~---~~~~~~~~v~l~ 763 (865)
+.+|+.+++++|+.+ .. .+. ..|.+.++
T Consensus 176 ~~~g~~~~v~~LL~~~gad~n~~d-~~g~t~l~ 207 (337)
T 4g8k_A 176 AEKGHVEVLKILLDEMGADVNACD-NMGRNALI 207 (337)
T ss_dssp HHHTCHHHHHHHHHHSCCCTTCCC-TTSCCHHH
T ss_pred HHCCCHHHHHHHHhccCCCcCccC-CCCCcHHH
Confidence 999999999998864 33 233 45555554
No 71
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.80 E-value=1.4e-19 Score=174.80 Aligned_cols=111 Identities=23% Similarity=0.132 Sum_probs=95.3
Q ss_pred ccchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhH
Q 002922 587 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQK 666 (865)
Q Consensus 587 R~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k 666 (865)
...++||+|+.+|+.++++.||+ +. +++ ..+..|+||||+|+..|+.++|++||++|++
T Consensus 43 ~g~t~L~~A~~~g~~~~v~~Ll~-~~--~~~-------~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----------- 101 (183)
T 3deo_A 43 EYETPWWTAARKADEQALSQLLE-DR--DVD-------AVDENGRTALLFVAGLGSDKCVRLLAEAGAD----------- 101 (183)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHTT-TS--CTT-------CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-----------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHh-cC--CCC-------CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----------
Confidence 34699999999999999999998 43 332 2356799999999999999999999999875
Q ss_pred HHHhhhcCCcccCCcccC-CCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcC
Q 002922 667 QLVDRAGSGFIFKPNVIG-PAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRA 738 (865)
Q Consensus 667 ~LV~~~s~~y~~d~Na~d-~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rG 738 (865)
+|.++ ..|+||||+|+..++.+ ++++|++. ||++|.+|.+|+||||+|+..+
T Consensus 102 -------------~~~~~~~~g~tpL~~A~~~~~~~-~v~~Ll~~------ga~~~~~d~~g~tpl~~A~~~~ 154 (183)
T 3deo_A 102 -------------LDHRDMRGGLTALHMAAGYVRPE-VVEALVEL------GADIEVEDERGLTALELAREIL 154 (183)
T ss_dssp -------------TTCCCSSSSCCHHHHHHHTTCHH-HHHHHHHH------TCCTTCCCTTSCCHHHHHHHHH
T ss_pred -------------CCcCCCCCCCCHHHHHHhcCcHH-HHHHHHHc------CCCCcCCCCCCCCHHHHHHHhc
Confidence 56677 88999999999998776 99999874 5889999999999999998763
No 72
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.79 E-value=6.1e-20 Score=181.49 Aligned_cols=127 Identities=18% Similarity=0.092 Sum_probs=103.7
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhc-CCCCCCCCCchhhH
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNY-APDNVLDKPGSRQK 666 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~-Gadi~~dg~~~~~k 666 (865)
..++||+|+.+|+.++++.||+.+++.+ ..+..|+||||+|+..|+.++|++||++ |+
T Consensus 73 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~------------ 131 (222)
T 3ehr_A 73 IDNPLHEAAKRGNLSWLRECLDNRVGVN---------GLDKAGSTALYWACHGGHKDIVEMLFTQPNI------------ 131 (222)
T ss_dssp ESCHHHHHHHHTCHHHHHHHHHTTCCTT---------CCCTTSCCHHHHHHHTTCHHHHHHHTTSTTC------------
T ss_pred cccccccccccCcHHHHHHHHhCCCCcc---------ccCCCCCCHHHHHHHcCCHHHHHHHHcCCCC------------
Confidence 3589999999999999999999875422 2356799999999999999999999998 65
Q ss_pred HHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHH
Q 002922 667 QLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLV 746 (865)
Q Consensus 667 ~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL 746 (865)
++|.+|..|+||||+|+..++.+ +|++|++. ||++|.+|.+|+||||+|+..|+.+++++|
T Consensus 132 ------------~~~~~d~~g~tpL~~A~~~~~~~-~v~~Ll~~------ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l 192 (222)
T 3ehr_A 132 ------------ELNQQNKLGDTALHAAAWKGYAD-IVQLLLAK------GARTDLRNIEKKLAFDMATNAACASLLKKK 192 (222)
T ss_dssp ------------CCCCCCTTSCCHHHHHHHHTCHH-HHHHHHHH------TCCSCCCCTTSCCHHHHCCSHHHHHHHC--
T ss_pred ------------CccccCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCCccccCCCCCHHHHhcchhHHHHHHHH
Confidence 46889999999999999998776 99999874 588999999999999999999999999988
Q ss_pred HHhhhhcC
Q 002922 747 QRKINKKS 754 (865)
Q Consensus 747 ~~K~~~~~ 754 (865)
..+.+.+.
T Consensus 193 ~~~~~~~~ 200 (222)
T 3ehr_A 193 QGTDAVRT 200 (222)
T ss_dssp --------
T ss_pred hccchhhh
Confidence 88765543
No 73
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.79 E-value=3.6e-19 Score=188.12 Aligned_cols=140 Identities=19% Similarity=0.128 Sum_probs=115.6
Q ss_pred hHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHc---CCHHHHHHHHhcCCCCCCCCCchhhH
Q 002922 590 WLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRR---NCRPMVELLLNYAPDNVLDKPGSRQK 666 (865)
Q Consensus 590 tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~---gn~eIVELLL~~Gadi~~dg~~~~~k 666 (865)
..|+.|+..|..++++.||+.+++.+..... ...+..|+||||+||.. ++.++|++||++|++
T Consensus 153 ~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~---~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad----------- 218 (301)
T 2b0o_E 153 QRLWTAICNRDLLSVLEAFANGQDFGQPLPG---PDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH----------- 218 (301)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSCEEC---SSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSC-----------
T ss_pred HHHhhhhhccCHHHHHHHHhcCCcccccCCC---cccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCC-----------
Confidence 5799999999999999999887553321000 01255799999999997 899999999999864
Q ss_pred HHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHH
Q 002922 667 QLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLV 746 (865)
Q Consensus 667 ~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL 746 (865)
+|.+|..|+||||+||..++.+ +|++|++. ||++|++|.+|+||||+|+..|+.+++++|
T Consensus 219 -------------vn~~d~~G~TpLh~A~~~g~~~-~v~~Ll~~------gad~~~~d~~G~TpL~~A~~~~~~~iv~~L 278 (301)
T 2b0o_E 219 -------------LDAKAADGNTALHYAALYNQPD-CLKLLLKG------RALVGTVNEAGETALDIARKKHHKECEELL 278 (301)
T ss_dssp -------------TTCCCTTCCCHHHHHHHTTCHH-HHHHHHHT------TCCCSCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred -------------CCCCCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCCCCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 6788999999999999998776 99999875 588999999999999999999999999999
Q ss_pred HHhhhhcCCCCCceEeecCCC
Q 002922 747 QRKINKKSSESGRVILDIPGS 767 (865)
Q Consensus 747 ~~K~~~~~~~~~~v~l~i~~~ 767 (865)
+++.++ ++.+.|+++..
T Consensus 279 l~~ga~----~g~tpLh~A~~ 295 (301)
T 2b0o_E 279 EQAQAG----TFAFPLHVDYS 295 (301)
T ss_dssp HHHHHH----TTSSCCC----
T ss_pred HHhcCC----CCCChhHHHHh
Confidence 999886 46788888753
No 74
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.79 E-value=8e-20 Score=189.38 Aligned_cols=156 Identities=14% Similarity=0.052 Sum_probs=111.7
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch-
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS- 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~- 663 (865)
..++||+|+..|+.++++.||+.+++.+. ..|.||||+|+..|+.++|++||++|++++. + |..+
T Consensus 31 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-----------~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L 99 (285)
T 3kea_A 31 GHSASYYAIADNNVRLVCTLLNAGALKNL-----------LENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTAL 99 (285)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTGGGSC-----------CTTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCCCCCCC-----------CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHH
Confidence 45899999999999999999999755322 1489999999999999999999999988763 2 2221
Q ss_pred ------hhHHHHhhhcCCcccCCcccCCCC-chHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCC-CCCCHHHHHH
Q 002922 664 ------RQKQLVDRAGSGFIFKPNVIGPAG-LTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDS-TGLTPNDYAS 735 (865)
Q Consensus 664 ------~~k~LV~~~s~~y~~d~Na~d~~G-~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~-~G~TPLHyAa 735 (865)
+..++++.+.. +++++|.++..| .||||+|+..++.+ ++++|++.+ +++ .|. .|+||||+|+
T Consensus 100 ~~A~~~g~~~~v~~Ll~-~ga~~~~~~~~g~~t~L~~A~~~~~~~-~v~~Ll~~g------~~~--~~~~~g~t~L~~A~ 169 (285)
T 3kea_A 100 YYAVDSGNMQTVKLFVK-KNWRLMFYGKTGWKTSFYHAVMLNDVS-IVSYFLSEI------PST--FDLAILLSCIHITI 169 (285)
T ss_dssp HHHHHTTCHHHHHHHHH-HCGGGGGCSSSGGGSHHHHHHHTTCHH-HHHHHHTTS------CTT--CCCSTHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHh-cCCCCCccCCCCCCCHHHHHHHcCCHH-HHHHHHhCC------Ccc--ccccCCccHHHHHH
Confidence 23334442211 156778888887 68888888877665 888887654 222 333 7888888888
Q ss_pred HcCCHHHHHHHHHhhhh---cCCCCCceE-eecC
Q 002922 736 LRAHHSYIHLVQRKINK---KSSESGRVI-LDIP 765 (865)
Q Consensus 736 ~rGn~eiIeLL~~K~~~---~~~~~~~v~-l~i~ 765 (865)
.+|+.+++++|+++.++ +. .+|.++ |+++
T Consensus 170 ~~g~~~~v~~Ll~~gad~n~~~-~~g~t~~L~~A 202 (285)
T 3kea_A 170 KNGHVDMMILLLDYMTSTNTNN-SLLFIPDIKLA 202 (285)
T ss_dssp HTTCHHHHHHHHHHHHHTCTTC-CCBCCTTHHHH
T ss_pred HcChHHHHHHHHHcCCCCCccc-CCCCChHHHHH
Confidence 88888888888877554 22 345565 6665
No 75
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.79 E-value=2.5e-19 Score=180.93 Aligned_cols=146 Identities=21% Similarity=0.120 Sum_probs=97.4
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch--
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS-- 663 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~-- 663 (865)
+++||+|+..|+.+++++||+.+.. +++ ..+..|.||||+|+..|+.++|++||++|++++. + |..+
T Consensus 91 ~t~L~~A~~~~~~~~v~~Ll~~~~~-~~~-------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~ 162 (253)
T 1yyh_A 91 RTPLHAAVSADAQGVFQILIRNRAT-DLD-------ARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALH 162 (253)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHSTTS-CTT-------CCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCC-Ccc-------ccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHH
Confidence 4566666666666666666655421 111 1133456666666666666666666666665542 1 2211
Q ss_pred -----hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcC
Q 002922 664 -----RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRA 738 (865)
Q Consensus 664 -----~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rG 738 (865)
+..++++.+.. +++++|.+|..|+||||+|+..++.+ ++++|++. ||+++.+|..|+||||+|+.+|
T Consensus 163 ~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~tpL~~A~~~~~~~-~v~~Ll~~------ga~~~~~d~~g~tpl~~A~~~g 234 (253)
T 1yyh_A 163 WAAAVNNVDAAVVLLK-NGANKDMQNNREETPLFLAAREGSYE-TAKVLLDH------FANRDITDHMDRLPRDIAQERM 234 (253)
T ss_dssp HHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHH-HHHHHHHT------TCCTTCCCTTCCCHHHHHHHTT
T ss_pred HHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHCCCHH-HHHHHHHc------CCCccccccCCCCHHHHHHHcC
Confidence 22223332111 14568899999999999999998776 99999875 4888999999999999999999
Q ss_pred CHHHHHHHHHhh
Q 002922 739 HHSYIHLVQRKI 750 (865)
Q Consensus 739 n~eiIeLL~~K~ 750 (865)
+.+++++|....
T Consensus 235 ~~~i~~~l~~~~ 246 (253)
T 1yyh_A 235 HHDIVRLLDLEH 246 (253)
T ss_dssp CHHHHHHHHC--
T ss_pred CHHHHHHHHHHh
Confidence 999999998653
No 76
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.79 E-value=7.8e-19 Score=175.41 Aligned_cols=158 Identities=16% Similarity=0.037 Sum_probs=125.6
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCch---HHhhccccHHHHHHHcCCHHHHHHHHhc-CCCCCC-C--C
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSS---ELAILEMGLLHKAVRRNCRPMVELLLNY-APDNVL-D--K 660 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~---~~~~~G~TpLH~AV~~gn~eIVELLL~~-Gadi~~-d--g 660 (865)
..++||+|+..|+.++++.|++.+++.+.. ..... ..+..|.||||+|+.+|+.++|++|+++ |++++. + +
T Consensus 105 g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~--~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g 182 (285)
T 1wdy_A 105 GFTAFMEAAVYGKVKALKFLYKRGANVNLR--RKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMG 182 (285)
T ss_dssp CCBHHHHHHHTTCHHHHHHHHHTTCCTTCC--CCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTS
T ss_pred cCCHHHHHHHhCCHHHHHHHHHhCCCcccc--cccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCC
Confidence 458999999999999999999998654432 11111 1245689999999999999999999987 887763 2 2
Q ss_pred Cch-------h----hHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCC
Q 002922 661 PGS-------R----QKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLT 729 (865)
Q Consensus 661 ~~~-------~----~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~T 729 (865)
..+ . ...+++.... +++++|.+|..|.||||+|+..++.+ ++++|++. .++++|.+|..|+|
T Consensus 183 ~t~l~~a~~~~~~~~~~~i~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~-----~g~~~~~~~~~g~t 255 (285)
T 1wdy_A 183 RNALIHALLSSDDSDVEAITHLLLD-HGADVNVRGERGKTPLILAVEKKHLG-LVQRLLEQ-----EHIEINDTDSDGKT 255 (285)
T ss_dssp CCHHHHHHHCSCTTTHHHHHHHHHH-TTCCSSCCCTTSCCHHHHHHHTTCHH-HHHHHHHS-----SSCCTTCCCTTSCC
T ss_pred CCHHHHHHHccccchHHHHHHHHHH-cCCCCCCcCCCCCcHHHHHHHcCCHH-HHHHHHhc-----cCCCccccCCCCCc
Confidence 221 1 1455553322 36789999999999999999998776 99999873 25789999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHhhhhcC
Q 002922 730 PNDYASLRAHHSYIHLVQRKINKKS 754 (865)
Q Consensus 730 PLHyAa~rGn~eiIeLL~~K~~~~~ 754 (865)
|||+|+.+|+.+++++|+++.++..
T Consensus 256 ~l~~A~~~~~~~i~~~Ll~~Ga~~~ 280 (285)
T 1wdy_A 256 ALLLAVELKLKKIAELLCKRGASTD 280 (285)
T ss_dssp HHHHHHHTTCHHHHHHHHHHSSCSC
T ss_pred HHHHHHHcCcHHHHHHHHHcCCCCC
Confidence 9999999999999999999988755
No 77
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.79 E-value=3.5e-19 Score=184.21 Aligned_cols=160 Identities=13% Similarity=-0.017 Sum_probs=125.2
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch-
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS- 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~- 663 (865)
..++||+|+..|..++++.||+.+++.+ ..+..|+||||+|+..|+.++|++||++|++++. + +..+
T Consensus 59 g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L 129 (285)
T 3d9h_A 59 DWSPMHEAAIHGHQLSLRNLISQGWAVN---------IITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPL 129 (285)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCSC---------EECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCC---------CcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHH
Confidence 3599999999999999999999875422 2356799999999999999999999999998773 2 3222
Q ss_pred ------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHc
Q 002922 664 ------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLR 737 (865)
Q Consensus 664 ------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~r 737 (865)
+..++++.+.. ++++++..+ .|.||||+|+..++.+ ++++|++. ++++|.+|.+|+||||+|+.+
T Consensus 130 ~~A~~~~~~~~v~~Ll~-~g~~~~~~~-~g~t~L~~A~~~g~~~-~v~~Ll~~------g~~~~~~d~~g~t~L~~A~~~ 200 (285)
T 3d9h_A 130 FNACVSGSWDCVNLLLQ-HGASVQPES-DLASPIHEAARRGHVE-CVNSLIAY------GGNIDHKISHLGTPLYLACEN 200 (285)
T ss_dssp HHHHHHTCHHHHHHHHH-TTCCSSCSC-TTSCHHHHHHHHTCHH-HHHHHHHT------TCCTTCCBTTTBCHHHHHHHT
T ss_pred HHHHHcCHHHHHHHHHH-CCCCCCCCC-CCCCHHHHHHHcCCHH-HHHHHHHC------CCCCCCcCCCCCCHHHHHHHc
Confidence 33444443221 245666544 5999999999998776 99999875 478899999999999999999
Q ss_pred CCHHHHHHHHHhhhhcC-CCCCceEeecC
Q 002922 738 AHHSYIHLVQRKINKKS-SESGRVILDIP 765 (865)
Q Consensus 738 Gn~eiIeLL~~K~~~~~-~~~~~v~l~i~ 765 (865)
|+.+++++|+++..+.. ...|.++|+++
T Consensus 201 ~~~~~v~~Ll~~ga~~~~~~~g~t~L~~A 229 (285)
T 3d9h_A 201 QQRACVKKLLESGADVNQGKGQDSPLHAV 229 (285)
T ss_dssp TCHHHHHHHHHTTCCTTCCBTTBCHHHHH
T ss_pred CcHHHHHHHHHCCCCCCCCCCCCCHHHHH
Confidence 99999999998855421 13677777776
No 78
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.79 E-value=1.4e-19 Score=182.28 Aligned_cols=126 Identities=21% Similarity=0.161 Sum_probs=110.4
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHH
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 668 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~L 668 (865)
.++||+|+.+|+.++++.||+.+++.+ ..+..|+||||+|+..|+.+||++||++|++
T Consensus 38 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~---------~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~------------- 95 (239)
T 1ycs_B 38 LALLLDSSLEGEFDLVQRIIYEVDDPS---------LPNDEGITALHNAVCAGHTEIVKFLVQFGVN------------- 95 (239)
T ss_dssp HHHHHHHHHHTCHHHHHHHTSTTSSCC---------CCCTTSCCHHHHHHHHTCHHHHHHHHHHTCC-------------
T ss_pred hHHHHHHHHcCCHHHHHHHHHcCCCCC---------CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-------------
Confidence 589999999999999999998875432 2356799999999999999999999999864
Q ss_pred HhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCC-CHHHHH--HHcCCHHHHHH
Q 002922 669 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGL-TPNDYA--SLRAHHSYIHL 745 (865)
Q Consensus 669 V~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~-TPLHyA--a~rGn~eiIeL 745 (865)
+|.+|..|+||||+||..++.+ ++++|++. +|++|.+|..|. ||||+| +.+|+.+++++
T Consensus 96 -----------~~~~d~~g~tpL~~A~~~~~~~-~v~~Ll~~------ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~ 157 (239)
T 1ycs_B 96 -----------VNAADSDGWTPLHCAASCNNVQ-VCKFLVES------GAAVFAMTYSDMQTAADKCEEMEEGYTQCSQF 157 (239)
T ss_dssp -----------TTCCCTTCCCHHHHHHHTTCHH-HHHHHHHT------TCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHH
T ss_pred -----------CCccCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCcceecCCCCcchHHHHHHhhhccHHHHHH
Confidence 6788999999999999998766 99999875 588999998887 999999 88899999999
Q ss_pred HHHhhhhcC
Q 002922 746 VQRKINKKS 754 (865)
Q Consensus 746 L~~K~~~~~ 754 (865)
|+.+.++..
T Consensus 158 Ll~~~a~~~ 166 (239)
T 1ycs_B 158 LYGVQEKMG 166 (239)
T ss_dssp HHHHHHHTT
T ss_pred HHHhhhccc
Confidence 999877643
No 79
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.79 E-value=1.1e-19 Score=192.32 Aligned_cols=145 Identities=19% Similarity=0.004 Sum_probs=114.4
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCC---HHHHHHHHhcCCCCCCCCCchh
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNC---RPMVELLLNYAPDNVLDKPGSR 664 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn---~eIVELLL~~Gadi~~dg~~~~ 664 (865)
.+++||+|+..|+.++|++||+.+++.+ ..+..|+||||+|+.+|+ .++++.||+++.
T Consensus 131 g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n---------~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~---------- 191 (327)
T 1sw6_A 131 GNTPLHWLTSIANLELVKHLVKHGSNRL---------YGDNMGESCLVKAVKSVNNYDSGTFEALLDYLY---------- 191 (327)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTT---------BCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHG----------
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCC---------CcCCCCCCHHHHHHHhcccccHHHHHHHHHhhh----------
Confidence 4689999999999999999998875432 235678999999999988 688888888852
Q ss_pred hHHHHhhhcCCcccCCcccCCCCchHHHHHHh----cCChHHHHHHhhcCCCC---------C-------Cc--------
Q 002922 665 QKQLVDRAGSGFIFKPNVIGPAGLTPLHVAAC----RDDAENVLDALTDDPGS---------V-------GI-------- 716 (865)
Q Consensus 665 ~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~----~~~~e~IVelLL~dp~~---------I-------g~-------- 716 (865)
.++|.+|..|+||||+|+. .++.+ ++++|++.+.. + |.
T Consensus 192 -------------~~~~~~d~~g~tpLh~A~~~~~~~g~~~-~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~ 257 (327)
T 1sw6_A 192 -------------PCLILEDSMNRTILHHIIITSGMTGCSA-AAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGE 257 (327)
T ss_dssp -------------GGGGEECTTCCCHHHHHHHHHTSTTCHH-HHHHHHHHHHHHHHHGGGCCEEEC--------------
T ss_pred -------------ccccCCCCCCCCHHHHHHHHccccccHH-HHHHHHHHHHHHHhcccchHHHhhhhcccCCccccccc
Confidence 2478899999999999998 65555 99999763100 0 00
Q ss_pred ---------------cccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh---cCCCCCceEeecCC
Q 002922 717 ---------------EAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK---KSSESGRVILDIPG 766 (865)
Q Consensus 717 ---------------gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~~ 766 (865)
+.++|.+|.+|+||||+|+.+|+.+++++|+++.++ +. .+|.++|+++.
T Consensus 258 g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d-~~G~TpL~~A~ 324 (327)
T 1sw6_A 258 RKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIAN-KSGLRPVDFGA 324 (327)
T ss_dssp --CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCC-TTSCCGGGGTC
T ss_pred CCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccC-CCCCCHHHHHH
Confidence 005899999999999999999999999999998665 34 57889888874
No 80
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.79 E-value=2.9e-19 Score=193.13 Aligned_cols=162 Identities=20% Similarity=0.201 Sum_probs=113.1
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch-
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS- 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~- 663 (865)
..++||+|+..|+.++++.|++.+++.+. .+..|.||||+|+..|+.+||++|+++|++.+. + +..+
T Consensus 212 g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~---------~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L 282 (437)
T 1n11_A 212 GYTPLHIAAKQNQVEVARSLLQYGGSANA---------ESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPL 282 (437)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTC---------CCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCC---------CCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHH
Confidence 35788888888888888888877644222 244577888888888888888888888877652 2 2221
Q ss_pred ------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHc
Q 002922 664 ------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLR 737 (865)
Q Consensus 664 ------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~r 737 (865)
+...+++.+.. +++++|.++..|+||||+|+.+++.+ +|++|++. +|++|.+|..|+||||+|+.+
T Consensus 283 ~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~g~~~-~v~~Ll~~------gad~n~~~~~g~t~L~~A~~~ 354 (437)
T 1n11_A 283 HLVAQEGHVPVADVLIK-HGVMVDATTRMGYTPLHVASHYGNIK-LVKFLLQH------QADVNAKTKLGYSPLHQAAQQ 354 (437)
T ss_dssp HHHHHHTCHHHHHHHHH-HTCCTTCCCSSCCCHHHHHHHSSCSH-HHHHHHHT------TCCTTCCCTTSCCHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHHh-CCccCCCCCCCCCCHHHHHHHcCcHH-HHHHHHhc------CCCCCCCCCCCCCHHHHHHHC
Confidence 22333332111 24577888888888888888887766 88888764 477888888888888888888
Q ss_pred CCHHHHHHHHHhhhhcC--CCCCceEeecCC
Q 002922 738 AHHSYIHLVQRKINKKS--SESGRVILDIPG 766 (865)
Q Consensus 738 Gn~eiIeLL~~K~~~~~--~~~~~v~l~i~~ 766 (865)
|+.+++++|+++.++.. ..+|.++++++.
T Consensus 355 g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~A~ 385 (437)
T 1n11_A 355 GHTDIVTLLLKNGASPNEVSSDGTTPLAIAK 385 (437)
T ss_dssp TCHHHHHHHHHTTCCSCCCCSSSCCHHHHHH
T ss_pred ChHHHHHHHHHCcCCCCCCCCCCCCHHHHHH
Confidence 88888888888765422 145677777653
No 81
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.78 E-value=4.9e-19 Score=180.68 Aligned_cols=165 Identities=16% Similarity=0.049 Sum_probs=113.1
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch--
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS-- 663 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~-- 663 (865)
.++|++|+..|+.++++.||+.+++.+ ..+..|.||||+|+..|+.++|++||++|++++. + |..+
T Consensus 41 ~t~l~~A~~~g~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~ 111 (299)
T 1s70_B 41 GAVFLAACSSGDTEEVLRLLERGADIN---------YANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLH 111 (299)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHCCCTT---------CBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred ccHHHHHHHcCCHHHHHHHHHcCCCCc---------ccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHH
Confidence 589999999999999999999875422 2356799999999999999999999999987652 2 2221
Q ss_pred -----hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcC-CCCCC--------------------cc
Q 002922 664 -----RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDD-PGSVG--------------------IE 717 (865)
Q Consensus 664 -----~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~d-p~~Ig--------------------~g 717 (865)
+..++++.+.. ++++++.++..|.||||+|+..++.+ +++.|+.. +..+. ..
T Consensus 112 ~A~~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~~~~-~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 189 (299)
T 1s70_B 112 AAASCGYLDIAEYLIS-QGAHVGAVNSEGDTPLDIAEEEAMEE-LLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGH 189 (299)
T ss_dssp HHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHCCSHHHHH-HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHcCCHHHHHHHHh-CCCCCCCcCCCCCCHHHHHHhcchHH-HHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccC
Confidence 23334442211 14567777777777777777664433 66555431 10000 00
Q ss_pred ccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh---cCCCCCceEeecC
Q 002922 718 AWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK---KSSESGRVILDIP 765 (865)
Q Consensus 718 A~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~ 765 (865)
......|..|.||||+|+.+|+.+++++|+++..+ +. .+|.++|+++
T Consensus 190 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d-~~g~tpL~~A 239 (299)
T 1s70_B 190 INDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKD-YDGWTPLHAA 239 (299)
T ss_dssp CCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCC-TTCCCHHHHH
T ss_pred cchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcC-CCCCcHHHHH
Confidence 11123567889999999999999999999887543 33 5778888876
No 82
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.78 E-value=4.8e-19 Score=190.28 Aligned_cols=151 Identities=18% Similarity=0.111 Sum_probs=104.1
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhcc-CCccCCCCCchHHhhccccHHHHHHHcC---CHHHHHHHHhcCCCCCC-----
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFD-GTVDTGDHTSSELAILEMGLLHKAVRRN---CRPMVELLLNYAPDNVL----- 658 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~-anV~~~~~s~~~~~~~G~TpLH~AV~~g---n~eIVELLL~~Gadi~~----- 658 (865)
..++||+|+..|+.+++++||+.+.. .+++ ..+..|.||||+|+..+ +.++|++|+++|++++.
T Consensus 199 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-------~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~ 271 (373)
T 2fo1_E 199 ERSALHQAAANRDFGMMVYMLNSTKLKGDIE-------ELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAAR 271 (373)
T ss_dssp CCCHHHHHHHTTCHHHHHHHTTSHHHHHTTS-------CCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGG
T ss_pred CCCHHHHHHHCCCHHHHHHHHhcCccccChh-------hcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccc
Confidence 45888999999999999888876510 1121 22556889999999887 88899999999887653
Q ss_pred ------CCCch-------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCC
Q 002922 659 ------DKPGS-------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDS 725 (865)
Q Consensus 659 ------dg~~~-------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~ 725 (865)
.|..+ +..++|+.+....++++|.+|..|+||||+|+.+++.+ +|++|++. ||++|.+|.
T Consensus 272 ~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~-iv~~Ll~~------gad~~~~d~ 344 (373)
T 2fo1_E 272 KDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIE-VVMYLIQQ------GASVEAVDA 344 (373)
T ss_dssp TSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHH-HHHHHHHT------TCCSSCCCS
T ss_pred cCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHH-HHHHHHHc------CCCccCCCC
Confidence 12211 23344443222223577778888888888888876655 78887664 467778888
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHhhhh
Q 002922 726 TGLTPNDYASLRAHHSYIHLVQRKINK 752 (865)
Q Consensus 726 ~G~TPLHyAa~rGn~eiIeLL~~K~~~ 752 (865)
.|+||||+|+.+|+.+++++|.++.++
T Consensus 345 ~g~t~l~~A~~~g~~~iv~~Ll~~~a~ 371 (373)
T 2fo1_E 345 TDHTARQLAQANNHHNIVDIFDRCRPE 371 (373)
T ss_dssp SSCCHHHHHHHTTCHHHHHHHHTTC--
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence 888888888888888888887776554
No 83
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.78 E-value=7.8e-20 Score=189.46 Aligned_cols=141 Identities=19% Similarity=0.073 Sum_probs=98.5
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch-
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS- 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~- 663 (865)
.++|||+|+.+|+.+++++||+.+++.+. .+..|.||||+|+..++.+++++||++|++++. + |..+
T Consensus 86 G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~---------~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL 156 (269)
T 4b93_B 86 GSSPLHVAALHGRADLIPLLLKHGANAGA---------RNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPL 156 (269)
T ss_dssp SCCHHHHHHHTTCTTHHHHHHHTTCCTTC---------CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHH
T ss_pred CCCHHHHHHHcCcHHHHHHHHhcCCCcCc---------cCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHH
Confidence 34677777777777777777776543221 234567777777777777777777777766652 2 2221
Q ss_pred ------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHc
Q 002922 664 ------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLR 737 (865)
Q Consensus 664 ------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~r 737 (865)
+..++|+.+. .+++++|.++..|+||||+||..++.+ +|++|++. |||+|++|.+|+||||||+.+
T Consensus 157 ~~A~~~g~~~~v~~Ll-~~gadvn~~~~~g~t~Lh~A~~~g~~~-~v~~Ll~~------Gad~~~~d~~G~TpL~~A~~~ 228 (269)
T 4b93_B 157 IYACSGGHHELVALLL-QHGASINASNNKGNTALHEAVIEKHVF-VVELLLLH------GASVQVLNKRQRTAVDCAEQN 228 (269)
T ss_dssp HHHHHTTCGGGHHHHH-HTTCCTTCBCTTSCBHHHHHHHTTCHH-HHHHHHHT------TCCSCCCCTTSCCSGGGSCTT
T ss_pred HHHHHCCCHHHHHHHH-HCCCCCCccccCCCcHHHHHHHcCCHH-HHHHHHHC------CCCCCCcCCCCCCHHHHHHhC
Confidence 2233333221 125678999999999999999998876 99999875 588999999999999999977
Q ss_pred CCHHHHHHHH
Q 002922 738 AHHSYIHLVQ 747 (865)
Q Consensus 738 Gn~eiIeLL~ 747 (865)
|+ ++++|.
T Consensus 229 ~~--i~~lL~ 236 (269)
T 4b93_B 229 SK--IMELLQ 236 (269)
T ss_dssp CH--HHHHTT
T ss_pred Cc--HHHHHH
Confidence 64 555553
No 84
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.78 E-value=2.9e-19 Score=192.00 Aligned_cols=161 Identities=18% Similarity=0.072 Sum_probs=124.7
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcC---CCCCC---CCC
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYA---PDNVL---DKP 661 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~G---adi~~---dg~ 661 (865)
..++||+|+.+|+.+++++||+.+++.+. .+..|.||||+|+..|+.+||++||+++ ++++. +|.
T Consensus 166 g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~---------~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~ 236 (373)
T 2fo1_E 166 ENTPLMLAVLARRRRLVAYLMKAGADPTI---------YNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGM 236 (373)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCSCC---------CCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSC
T ss_pred CCCHHHHHHHcChHHHHHHHHHCCCCCcc---------cCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCC
Confidence 46999999999999999999998755332 2567999999999999999999999987 55552 222
Q ss_pred ch-------h---hHHHHhhhcCCcccCCcc--------cCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCcccccccc
Q 002922 662 GS-------R---QKQLVDRAGSGFIFKPNV--------IGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQ 723 (865)
Q Consensus 662 ~~-------~---~k~LV~~~s~~y~~d~Na--------~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNak 723 (865)
.+ + ..++++.+.. +++++|. +|..|+||||+||..++.+ +|++|++.+ ++++|.+
T Consensus 237 t~L~~A~~~~~~~~~~~v~~Ll~-~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~-~v~~Ll~~~-----~~~~n~~ 309 (373)
T 2fo1_E 237 TALMIVAHNEGRDQVASAKLLVE-KGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMP-IVKYLVGEK-----GSNKDKQ 309 (373)
T ss_dssp CHHHHHHHSCSTTHHHHHHHHHH-HTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHH-HHHHHHHHS-----CCCTTCC
T ss_pred CHHHHHHHhCCcchHHHHHHHHH-CCCCcccccccccCcccccCCCHHHHHHHhCCHH-HHHHHHHhc-----CCCccCc
Confidence 21 1 3444442211 1345554 6789999999999998876 999998643 3789999
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHhhhh---cCCCCCceEeecC
Q 002922 724 DSTGLTPNDYASLRAHHSYIHLVQRKINK---KSSESGRVILDIP 765 (865)
Q Consensus 724 D~~G~TPLHyAa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~ 765 (865)
|.+|+||||+|+.+|+.+++++|+++.++ +. .+|.++|+++
T Consensus 310 d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d-~~g~t~l~~A 353 (373)
T 2fo1_E 310 DEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVD-ATDHTARQLA 353 (373)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCC-SSSCCHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCC-CCCCCHHHHH
Confidence 99999999999999999999999998665 33 4566666665
No 85
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.78 E-value=4.6e-19 Score=180.01 Aligned_cols=124 Identities=22% Similarity=0.149 Sum_probs=106.5
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHH
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 667 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~ 667 (865)
..++||+|+.+|+.++++.||+ ++ +++ ..+..|+||||+|+.+|+.++|++||++|++
T Consensus 45 g~t~L~~A~~~g~~~~v~~Ll~-~~--~~~-------~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~------------ 102 (244)
T 3ui2_A 45 YETPWWTAARKADEQALSQLLE-DR--DVD-------AVDENGRTALLFVAGLGSDKCVRLLAEAGAD------------ 102 (244)
T ss_dssp HHHHHHHHHTTTCHHHHHHTTT-TC--CTT-------CBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC------------
T ss_pred CCCHHHHHHHcCCHHHHHHHHc-CC--CCC-------CcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC------------
Confidence 4699999999999999999998 53 332 2356799999999999999999999999875
Q ss_pred HHhhhcCCcccCCcccC-CCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHH-----------
Q 002922 668 LVDRAGSGFIFKPNVIG-PAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYAS----------- 735 (865)
Q Consensus 668 LV~~~s~~y~~d~Na~d-~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa----------- 735 (865)
+|.++ ..|+||||+|+.+++.+ +|++|++. ||++|.+|..|+||||+|+
T Consensus 103 ------------~~~~~~~~g~t~L~~A~~~g~~~-~v~~Ll~~------ga~~~~~d~~g~t~l~~A~~~~~~~~~~~~ 163 (244)
T 3ui2_A 103 ------------LDHRDMRGGLTALHMAAGYVRPE-VVEALVEL------GADIEVEDERGLTALELAREILKTTPKGNP 163 (244)
T ss_dssp ------------TTCCCSSSCCCHHHHHHHTTCHH-HHHHHHHT------TCCTTCCCTTCCCHHHHHHHHHTTCCCSSH
T ss_pred ------------CCcCCCCCCCCHHHHHHHcCCHH-HHHHHHHC------CCCCCCCCCCCCcHHHHHHHHHhccCCCCH
Confidence 56677 78999999999998776 99999875 5889999999999999998
Q ss_pred -----HcCCHHHHHHHHHhhhh
Q 002922 736 -----LRAHHSYIHLVQRKINK 752 (865)
Q Consensus 736 -----~rGn~eiIeLL~~K~~~ 752 (865)
..|+.+++++|..+..+
T Consensus 164 l~~a~~~g~~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 164 MQFGRRIGLEKVINVLEGQVFE 185 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHEE
T ss_pred HHHHHHcChHHHHHHHHHhccc
Confidence 66889999999987443
No 86
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.77 E-value=2.9e-18 Score=167.42 Aligned_cols=150 Identities=19% Similarity=0.104 Sum_probs=112.3
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCchh
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGSR 664 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~~ 664 (865)
..++||+|+.+|+.++++.|++.+++.+ ..+..|.||||+|+..|+.+++++|+++|++++. + +..+.
T Consensus 76 ~~t~L~~A~~~~~~~~v~~Ll~~g~~~~---------~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l 146 (240)
T 3eu9_A 76 NSTPLHWATRQGHLSMVVQLMKYGADPS---------LIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPL 146 (240)
T ss_dssp TBCHHHHHHHHTCHHHHHHHHHTTCCTT---------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CCChhHHHHHcCCHHHHHHHHHcCCCCc---------ccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHH
Confidence 3589999999999999999998865432 2255688999999999999999999999987763 2 22221
Q ss_pred --------hHHHHhhhcCCcccCCcccCC-CCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHH
Q 002922 665 --------QKQLVDRAGSGFIFKPNVIGP-AGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYAS 735 (865)
Q Consensus 665 --------~k~LV~~~s~~y~~d~Na~d~-~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa 735 (865)
...+++... .+++++|..+. .|.||||+|+.+++.+ ++++|++. |+++|.+|..|+||||+|+
T Consensus 147 ~~a~~~~~~~~~~~~L~-~~~~~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~------g~~~~~~~~~g~t~l~~A~ 218 (240)
T 3eu9_A 147 MWAAYRTHSVDPTRLLL-TFNVSVNLGDKYHKNTALHWAVLAGNTT-VISLLLEA------GANVDAQNIKGESALDLAK 218 (240)
T ss_dssp HHHHHHCCSSTTHHHHH-HTTCCTTCCCTTTCCCHHHHHHHHTCHH-HHHHHHHH------TCCTTCBCTTSCBHHHHHH
T ss_pred HHHHHhCChHHHHHHHH-hcCCCcchhhccCCCcHHHHHHHcCCHH-HHHHHHHc------CCCCCCcCCCCCCHHHHHH
Confidence 112222111 12567888886 8999999999998766 99999764 4788999999999999999
Q ss_pred HcCCHHHHHHHHHhhhhcC
Q 002922 736 LRAHHSYIHLVQRKINKKS 754 (865)
Q Consensus 736 ~rGn~eiIeLL~~K~~~~~ 754 (865)
.+|+.+++++|.++..++.
T Consensus 219 ~~~~~~~v~~L~~~~~~~~ 237 (240)
T 3eu9_A 219 QRKNVWMINHLQEARQAKG 237 (240)
T ss_dssp HTTCHHHHHHHHHHC----
T ss_pred HcCcHHHHHHHHHhhhccC
Confidence 9999999999998876543
No 87
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.77 E-value=1.1e-18 Score=195.74 Aligned_cols=138 Identities=19% Similarity=0.150 Sum_probs=111.1
Q ss_pred hHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHH---cCCHHHHHHHHhcCCCCCCCCCchhhH
Q 002922 590 WLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVR---RNCRPMVELLLNYAPDNVLDKPGSRQK 666 (865)
Q Consensus 590 tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~---~gn~eIVELLL~~Gadi~~dg~~~~~k 666 (865)
..||.|+..|..++++.||+.+++.+.... ....+..|+||||+||+ .|+.++|++||++|+|
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~---~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~----------- 199 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPLP---GPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH----------- 199 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCBC---CSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCC-----------
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCCC---CcccccccchHHHHHHHhcccccHHHHHHHHHcCCC-----------
Confidence 579999999999999999999866443211 11124579999999977 9999999999999864
Q ss_pred HHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHH
Q 002922 667 QLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLV 746 (865)
Q Consensus 667 ~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL 746 (865)
+|.+|..|+||||+||.+++.+ +|++|++. ||++|++|.+|+||||+|+.+|+.+++++|
T Consensus 200 -------------vn~~d~~g~TpLh~A~~~g~~~-~v~~Ll~~------ga~~~~~d~~g~tpl~~A~~~~~~~~~~~L 259 (497)
T 3lvq_E 200 -------------LDAKAADGNTALHYAALYNQPD-CLKLLLKG------RALVGTVNEAGETALDIARKKHHKECEELL 259 (497)
T ss_dssp -------------TTCCCSSSCCHHHHHTTTTCHH-HHHHHHHT------CCCCSCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred -------------CCccCCCCCcHHHHHHHcCCHH-HHHHHHHc------CCCCCCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 6889999999999999998776 99999875 588999999999999999999999999999
Q ss_pred HHhhhhcCCCCCceEeecC
Q 002922 747 QRKINKKSSESGRVILDIP 765 (865)
Q Consensus 747 ~~K~~~~~~~~~~v~l~i~ 765 (865)
+++.++.. . +.+|++
T Consensus 260 l~~ga~~~--~--~~~h~~ 274 (497)
T 3lvq_E 260 EQAQAGTF--A--FPLHVD 274 (497)
T ss_dssp HHTCC--------------
T ss_pred HHhCCCCC--C--Ccceee
Confidence 99988755 2 455554
No 88
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.77 E-value=9.5e-19 Score=160.48 Aligned_cols=110 Identities=26% Similarity=0.255 Sum_probs=96.1
Q ss_pred HhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHH
Q 002922 626 LAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLD 705 (865)
Q Consensus 626 ~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVe 705 (865)
.+..|+||||+|+.+|+.++|++||++|++ +|.+|..|+||||+|+..++.+ +++
T Consensus 6 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------------------------~~~~~~~g~t~L~~A~~~~~~~-~~~ 60 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDIPSVEYLLQNGSD------------------------PNVKDHAGWTPLHEACNHGHLK-VVE 60 (137)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCC------------------------SCCCCTTSCCHHHHHHHTTCHH-HHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------------------CCcCCCCCCCHHHHHHHcCCHH-HHH
Confidence 356799999999999999999999999864 5778999999999999998776 999
Q ss_pred HhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh---cCCCCCceEeecCCC
Q 002922 706 ALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK---KSSESGRVILDIPGS 767 (865)
Q Consensus 706 lLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~~~ 767 (865)
+|++. ++++|.+|..|+||||+|+..|+.+++++|+++.++ +. .+|.++|+++..
T Consensus 61 ~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~-~~g~tpl~~A~~ 118 (137)
T 3c5r_A 61 LLLQH------KALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVN-IFGLRPVDYTDD 118 (137)
T ss_dssp HHHHT------TCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCGGGGCCC
T ss_pred HHHHc------CCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCC-CCCCCHHHHHhh
Confidence 99875 478899999999999999999999999999987554 44 577888888754
No 89
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.76 E-value=5e-19 Score=182.90 Aligned_cols=160 Identities=19% Similarity=0.085 Sum_probs=121.5
Q ss_pred hHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCC-CCCC-C--CCch--
Q 002922 590 WLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAP-DNVL-D--KPGS-- 663 (865)
Q Consensus 590 tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Ga-di~~-d--g~~~-- 663 (865)
.++|.|+.+|..+.++.+++.+.+..++ ..|..|+||||+|+..|+.++|++||++|+ +++. + |..+
T Consensus 78 ~~l~~a~~~~~~~~~~~l~~~~~~~~~n-------~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~ 150 (276)
T 4hbd_A 78 SDAHPELVRRHLVTFRAMSARLLDYVVN-------IADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIM 150 (276)
T ss_dssp TTCCHHHHHHHHHHHHHHCHHHHHHHHT-------CCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhhcCc-------CCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHH
Confidence 5667888888899999888776553333 235679999999999999999999999998 6553 2 2211
Q ss_pred ----------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHH
Q 002922 664 ----------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDY 733 (865)
Q Consensus 664 ----------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHy 733 (865)
...+++.... .++.+++..+..|+||||+||.+++.+ +|++|++. ||++|.+|.+|+||||+
T Consensus 151 ~a~~~~~~~~~~~~~v~~Ll-~~g~~~~~~~~~g~tpLh~A~~~g~~~-~v~~Ll~~------gad~n~~d~~G~TpLh~ 222 (276)
T 4hbd_A 151 LTALATLKTQDDIETVLQLF-RLGNINAKASQAGQTALMLAVSHGRVD-VVKALLAC------EADVNVQDDDGSTALMC 222 (276)
T ss_dssp HGGGCCCCSHHHHHHHHHHH-HHSCTTCCCTTTCCCHHHHHHHTTCHH-HHHHHHHT------TCCTTCCCTTSCCHHHH
T ss_pred HHHHHHhhhhhhHHHHHHHH-HcCCCccccCCCCCCHHHHHHHcCCHH-HHHHHHhC------CCCCCCCCCCCCCHHHH
Confidence 2223333211 113467888999999999999998766 99999875 58899999999999999
Q ss_pred HHHcCCHHHHHHHHH-hhhh---cCCCCCceEeecC
Q 002922 734 ASLRAHHSYIHLVQR-KINK---KSSESGRVILDIP 765 (865)
Q Consensus 734 Aa~rGn~eiIeLL~~-K~~~---~~~~~~~v~l~i~ 765 (865)
|+.+|+.+++++|++ +.++ +. .+|.++|+++
T Consensus 223 A~~~g~~~iv~~Ll~~~gad~~~~d-~~g~TpL~~A 257 (276)
T 4hbd_A 223 ACEHGHKEIAGLLLAVPSCDISLTD-RDGSTALMVA 257 (276)
T ss_dssp HHHHTCHHHHHHHHTSTTCCTTCCC-TTSCCHHHHH
T ss_pred HHHCCCHHHHHHHHhcCCCCCcCcC-CCCCCHHHHH
Confidence 999999999999998 5443 33 4566666664
No 90
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.76 E-value=1.8e-18 Score=168.55 Aligned_cols=125 Identities=27% Similarity=0.250 Sum_probs=100.2
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCCCCC-C--CCch-------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChH
Q 002922 632 GLLHKAVRRNCRPMVELLLNYAPDNVL-D--KPGS-------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAE 701 (865)
Q Consensus 632 TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g~~~-------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e 701 (865)
+.|+.||++|+.++|++||++|+|++. + |..+ ....++.... .+++++|.+|..|+||||+||..++.+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll-~~gad~~~~d~~g~TpLh~A~~~g~~~ 84 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLI-SKGADVNAKDSDGRTPLHHAAENGHKE 84 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH-hcccchhhhccCCCCHHHHHHHcCCHH
Confidence 579999999999999999999999873 2 3322 2233333211 126789999999999999999998766
Q ss_pred HHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh---cCCCCCceEeecC
Q 002922 702 NVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK---KSSESGRVILDIP 765 (865)
Q Consensus 702 ~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~ 765 (865)
+|++|++. ||++|.+|.+|+||||+|+.+|+.+++++|+++.++ +. .+|.|+|+++
T Consensus 85 -~v~~Ll~~------gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d-~~G~TpL~~A 143 (169)
T 4gpm_A 85 -VVKLLISK------GADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSD-SDGRTPLDLA 143 (169)
T ss_dssp -HHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHH
T ss_pred -HHHHHHHC------cCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccC-CCCCCHHHHH
Confidence 99999875 588999999999999999999999999999998654 33 4567777665
No 91
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.75 E-value=1.7e-18 Score=187.08 Aligned_cols=161 Identities=22% Similarity=0.172 Sum_probs=128.2
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC---CCCch-
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL---DKPGS- 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~---dg~~~- 663 (865)
..++||+|+..|+.++|+.||+.+++.+. .+..|.||||+|++.|+.++|++|+++|++++. ++..+
T Consensus 14 g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~---------~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L 84 (437)
T 1n11_A 14 GLTPLHVASFMGHLPIVKNLLQRGASPNV---------SNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPL 84 (437)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCSCC---------SSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHH
T ss_pred CCCHHHHHHHCCCHHHHHHHHHcCCCCCC---------CCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHH
Confidence 35899999999999999999998754332 255789999999999999999999999998763 23222
Q ss_pred ------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHc
Q 002922 664 ------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLR 737 (865)
Q Consensus 664 ------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~r 737 (865)
+..++|+.+.. +++++|..+..|.||||+|+..++.+ +++.|++.+ ++++.+|..|.||||+|+.+
T Consensus 85 ~~A~~~g~~~~v~~Ll~-~ga~~~~~~~~g~t~L~~A~~~g~~~-~v~~Ll~~~------~~~~~~~~~g~t~L~~A~~~ 156 (437)
T 1n11_A 85 HCAARIGHTNMVKLLLE-NNANPNLATTAGHTPLHIAAREGHVE-TVLALLEKE------ASQACMTKKGFTPLHVAAKY 156 (437)
T ss_dssp HHHHHHTCHHHHHHHHH-HTCCTTCCCTTCCCHHHHHHHHTCHH-HHHHHHHTT------CCSCCCCTTSCCHHHHHHHT
T ss_pred HHHHHCCCHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHcCCHH-HHHHHHhCC------CCCcCCCCCCCCHHHHHHHc
Confidence 33445553221 25688999999999999999998876 999998753 66788999999999999999
Q ss_pred CCHHHHHHHHHhhhh---cCCCCCceEeecCC
Q 002922 738 AHHSYIHLVQRKINK---KSSESGRVILDIPG 766 (865)
Q Consensus 738 Gn~eiIeLL~~K~~~---~~~~~~~v~l~i~~ 766 (865)
|+.+++++|+++..+ .. .+|.++|+++-
T Consensus 157 g~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~ 187 (437)
T 1n11_A 157 GKVRVAELLLERDAHPNAAG-KNGLTPLHVAV 187 (437)
T ss_dssp TCHHHHHHHHHTTCCTTCCC-SSCCCHHHHHH
T ss_pred CCHHHHHHHHhCCCCCCCCC-CCCCCHHHHHH
Confidence 999999999987554 33 46778888763
No 92
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.75 E-value=3.6e-18 Score=186.97 Aligned_cols=142 Identities=21% Similarity=0.100 Sum_probs=108.9
Q ss_pred chHHHHHHHC-CCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHH
Q 002922 589 KWLLEFSMEH-DWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 667 (865)
Q Consensus 589 ~tLL~fAver-g~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~ 667 (865)
.++||+|+.. |..++++.||+.+++.+.. + .+..|.||||+|+..|+.++|++||++|++
T Consensus 200 ~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~----~---~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gad------------ 260 (368)
T 3jue_A 200 GALLFRASGHPPSLPTMADALAHGADVNWV----N---GGQDNATPLIQATAANSLLACEFLLQNGAN------------ 260 (368)
T ss_dssp HHHHHHHTSSSCCHHHHHHHHHTTCCTTCC----C---TTTTCCCHHHHHHHTTCHHHHHHHHHTTCC------------
T ss_pred CcHHHHHHHccCCHHHHHHHHHcCCCCCcc----c---cccCCCCHHHHHHHCCCHHHHHHHHHcCCC------------
Confidence 3799999999 9999999999988654321 1 125689999999999999999999999864
Q ss_pred HHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHH
Q 002922 668 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQ 747 (865)
Q Consensus 668 LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~ 747 (865)
+|.+|..|+||||+|+..++.+ +|++|++. ||++|++|.+|+||||+|+..|+.+++++|.
T Consensus 261 ------------vn~~d~~G~TpLh~A~~~g~~~-~v~~LL~~------Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl 321 (368)
T 3jue_A 261 ------------VNQADSAGRGPLHHATILGHTG-LACLFLKR------GADLGARDSEGRDPLTIAMETANADIVTLLR 321 (368)
T ss_dssp ------------TTCCCTTSCCHHHHHHHHTCHH-HHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred ------------CCCCCCCCCCHHHHHHHcCcHH-HHHHHHHC------cCCCCCcCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 6788999999999999998766 99999875 5889999999999999999999999999998
Q ss_pred Hhhhh------cCCCCCceEeecCCCcc
Q 002922 748 RKINK------KSSESGRVILDIPGSIV 769 (865)
Q Consensus 748 ~K~~~------~~~~~~~v~l~i~~~~~ 769 (865)
....+ .+ ..+.+.+++-..+.
T Consensus 322 ~~~~~~~~~~~~~-~~~~t~l~i~~~~~ 348 (368)
T 3jue_A 322 LAKMREAEAAQGQ-AGDETYLDIFRDFS 348 (368)
T ss_dssp HHHC------------------------
T ss_pred HcCCCcccccccC-CCCCCHHHHHHHHH
Confidence 76432 22 35566666655544
No 93
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.75 E-value=3.6e-18 Score=154.21 Aligned_cols=107 Identities=23% Similarity=0.153 Sum_probs=92.6
Q ss_pred hccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHh
Q 002922 628 ILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDAL 707 (865)
Q Consensus 628 ~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelL 707 (865)
..|.||||+|++.|+.++|++||++|++ +|.+|..|+||||+|+..++.+ ++++|
T Consensus 5 ~~~~~~l~~A~~~~~~~~v~~ll~~~~~------------------------~~~~~~~g~t~L~~A~~~~~~~-~v~~L 59 (123)
T 3aaa_C 5 SMCDKEFMWALKNGDLDEVKDYVAKGED------------------------VNRTLEGGRKPLHYAADCGQLE-ILEFL 59 (123)
T ss_dssp --CHHHHHHHHHTTCHHHHHHHHHTTCC------------------------TTSCCTTSSCHHHHHHHTTCHH-HHHHH
T ss_pred cccchHHHHHHHcCCHHHHHHHHHcCCC------------------------cCccCCCCCcHHHHHHHcCCHH-HHHHH
Confidence 3578999999999999999999999864 5778999999999999998776 99999
Q ss_pred hcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh---cCCCCCceEeecCC
Q 002922 708 TDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK---KSSESGRVILDIPG 766 (865)
Q Consensus 708 L~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~~ 766 (865)
++. ++++|.+|.+|+||||+|+.+|+.+++++|+++..+ +. ..|.++|+++.
T Consensus 60 l~~------g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~-~~g~t~l~~A~ 114 (123)
T 3aaa_C 60 LLK------GADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKG-PDGLTAFEATD 114 (123)
T ss_dssp HTT------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHCC
T ss_pred HHc------CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcC-CCCCCHHHHhC
Confidence 874 478999999999999999999999999999998554 33 56778888773
No 94
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.75 E-value=4.3e-19 Score=175.26 Aligned_cols=136 Identities=12% Similarity=0.006 Sum_probs=110.4
Q ss_pred hHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHh-hccccHHHHHHHcCCH----HHHHHHHhcCCCCCCCCCchh
Q 002922 590 WLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELA-ILEMGLLHKAVRRNCR----PMVELLLNYAPDNVLDKPGSR 664 (865)
Q Consensus 590 tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~-~~G~TpLH~AV~~gn~----eIVELLL~~Gadi~~dg~~~~ 664 (865)
..|+.|+..|..+.++.++..+.+ ..+ ..|+||||+|+.+++. +||++||++|++
T Consensus 8 ~~l~~Aa~~g~~~~~~~l~~~~~~-----------~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gad--------- 67 (186)
T 3t8k_A 8 RTVSAAAMLGTYEDFLELFEKGYE-----------DKESVLKSNILYDVLRNNNDEARYKISMFLINKGAD--------- 67 (186)
T ss_dssp SSHHHHHHHSCHHHHHHHHHHSSS-----------CHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCC---------
T ss_pred cHHHHHHHcCCHHHHHHHHhcCcc-----------cccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCC---------
Confidence 468899999999999999876421 123 6799999999999985 599999999874
Q ss_pred hHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCCh-----HHHHHHhhcCCCCCCccccccccCCCCC-CHHHHHHHcC
Q 002922 665 QKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDA-----ENVLDALTDDPGSVGIEAWKSAQDSTGL-TPNDYASLRA 738 (865)
Q Consensus 665 ~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~-----e~IVelLL~dp~~Ig~gA~VNakD~~G~-TPLHyAa~rG 738 (865)
||.+|..|+||||+|+..++. .+++++|++. ||++|++|.+|+ ||||||+..|
T Consensus 68 ---------------vn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~------Gadin~~d~~g~ttpLh~A~~~~ 126 (186)
T 3t8k_A 68 ---------------IKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEK------GADITALYKPYKIVVFKNIFNYF 126 (186)
T ss_dssp ---------------SSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHT------TCCSSSCBGGGTBCTTGGGGGCC
T ss_pred ---------------CCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHC------CCCCCccCCCcCchHHHHHHHcC
Confidence 688999999999999998752 2489999874 589999999999 9999999944
Q ss_pred -----CHHHHHHHHH-hhhh---cCCCCCceEeecCCC
Q 002922 739 -----HHSYIHLVQR-KINK---KSSESGRVILDIPGS 767 (865)
Q Consensus 739 -----n~eiIeLL~~-K~~~---~~~~~~~v~l~i~~~ 767 (865)
+.+++++|+. +.++ +. ..|.++|+++..
T Consensus 127 ~~~~~~~~iv~~Ll~~~gad~~~~d-~~G~TpL~~A~~ 163 (186)
T 3t8k_A 127 VDENEMIPLYKLIFSQSGLQLLIKD-KWGLTALEFVKR 163 (186)
T ss_dssp SCHHHHHHHHHHHHTSTTCCTTCCC-TTSCCHHHHHHT
T ss_pred CChhhHHHHHHHHHHhcCCCCcccC-CCCCCHHHHHHH
Confidence 4568899988 6554 44 578888888644
No 95
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.74 E-value=1.7e-18 Score=179.50 Aligned_cols=148 Identities=16% Similarity=0.053 Sum_probs=118.3
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-C--C-Cch
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-D--K-PGS 663 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~-d--g-~~~ 663 (865)
..++||+|+..|+.+++++||+.+++.+ ..+..|+||||+|+..|+.++|++||++|++++. + + ..+
T Consensus 62 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~---------~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~ 132 (285)
T 3kea_A 62 NEFPLHQAATLEDTKIVKILLFSGLDDS---------QFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTS 132 (285)
T ss_dssp TCCHHHHHTTSSSCHHHHHHHHTTCCTT---------CCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCC---------CcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCH
Confidence 4699999999999999999999875432 2356799999999999999999999999998773 2 2 222
Q ss_pred -------hhHHHHhhhcCCcccCCcccCC-CCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCH-HHHH
Q 002922 664 -------RQKQLVDRAGSGFIFKPNVIGP-AGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTP-NDYA 734 (865)
Q Consensus 664 -------~~k~LV~~~s~~y~~d~Na~d~-~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TP-LHyA 734 (865)
+..++++..... + .+..+. .|+||||+|+..++.+ ++++|++. ||++|.+|..|+|| ||+|
T Consensus 133 L~~A~~~~~~~~v~~Ll~~-g--~~~~~~~~g~t~L~~A~~~g~~~-~v~~Ll~~------gad~n~~~~~g~t~~L~~A 202 (285)
T 3kea_A 133 FYHAVMLNDVSIVSYFLSE-I--PSTFDLAILLSCIHITIKNGHVD-MMILLLDY------MTSTNTNNSLLFIPDIKLA 202 (285)
T ss_dssp HHHHHHTTCHHHHHHHHTT-S--CTTCCCSTHHHHHHHHHHTTCHH-HHHHHHHH------HHHTCTTCCCBCCTTHHHH
T ss_pred HHHHHHcCCHHHHHHHHhC-C--CccccccCCccHHHHHHHcChHH-HHHHHHHc------CCCCCcccCCCCChHHHHH
Confidence 344455532211 2 233444 8999999999998776 99999763 68899999999998 9999
Q ss_pred HHcCCHHHHHHHHHhhhhcC
Q 002922 735 SLRAHHSYIHLVQRKINKKS 754 (865)
Q Consensus 735 a~rGn~eiIeLL~~K~~~~~ 754 (865)
+.+|+.+++++|+++.++..
T Consensus 203 ~~~~~~~~v~~Ll~~gad~~ 222 (285)
T 3kea_A 203 IDNKDIEMLQALFKYDINIY 222 (285)
T ss_dssp HHHTCHHHHHHHTTSCBCST
T ss_pred HHcCCHHHHHHHHHcCCCCC
Confidence 99999999999999988765
No 96
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.74 E-value=1.1e-17 Score=163.39 Aligned_cols=146 Identities=17% Similarity=0.148 Sum_probs=91.7
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCC----CCch-
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLD----KPGS- 663 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~d----g~~~- 663 (865)
.++|++|+..|..++++.|++.+++.+ ..+..|.||||+|++.|+.++|++|+++|++.+.. +..+
T Consensus 10 ~~~l~~A~~~g~~~~~~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L 80 (240)
T 3eu9_A 10 TWDIVKATQYGIYERCRELVEAGYDVR---------QPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPL 80 (240)
T ss_dssp GCCHHHHHHTTCHHHHHHHHHTTCCTT---------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHH
T ss_pred chHHHHHHHcCChHHHHHHHHcCCCcC---------CCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChh
Confidence 478999999999999999999875422 22557999999999999999999999999865421 1111
Q ss_pred ------hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHc
Q 002922 664 ------RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLR 737 (865)
Q Consensus 664 ------~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~r 737 (865)
+..++++... .++++++.++..|.||||+|+..++.+ ++++|++. +++++.+|.+|.||||+|+.+
T Consensus 81 ~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~l~~A~~~~~~~-~~~~Ll~~------~~~~~~~~~~g~t~l~~a~~~ 152 (240)
T 3eu9_A 81 HWATRQGHLSMVVQLM-KYGADPSLIDGEGCSCIHLAAQFGHTS-IVAYLIAK------GQDVDMMDQNGMTPLMWAAYR 152 (240)
T ss_dssp HHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHH-HHHHHHHT------TCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHH-HcCCCCcccCCCCCCHHHHHHHcCHHH-HHHHHHhc------CCCccccCCCCCcHHHHHHHh
Confidence 1222222111 113455555556666666666555444 55655543 244555566666666666644
Q ss_pred CC-HHHHHHHHHhhh
Q 002922 738 AH-HSYIHLVQRKIN 751 (865)
Q Consensus 738 Gn-~eiIeLL~~K~~ 751 (865)
++ .+++++|.++..
T Consensus 153 ~~~~~~~~~L~~~~~ 167 (240)
T 3eu9_A 153 THSVDPTRLLLTFNV 167 (240)
T ss_dssp CCSSTTHHHHHHTTC
T ss_pred CChHHHHHHHHhcCC
Confidence 44 455555555433
No 97
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.73 E-value=1.3e-18 Score=160.15 Aligned_cols=109 Identities=22% Similarity=0.208 Sum_probs=91.5
Q ss_pred HHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHH
Q 002922 625 ELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVL 704 (865)
Q Consensus 625 ~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IV 704 (865)
..+..|.||||+|+++|+.++|++||++|++ +|.+|..|+||||+|+. ++.+ ++
T Consensus 7 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------------------~~~~~~~g~t~L~~A~~-~~~~-~v 60 (136)
T 1d9s_A 7 MLGGSSDAGLATAAARGQVETVRQLLEAGAD------------------------PNALNRFGRRPIQVMMM-GSAQ-VA 60 (136)
T ss_dssp CCCCCCSCHHHHHHHTTCHHHHHHHHHTTCC------------------------TTCCCTTCCTTTTTSTT-SCHH-HH
T ss_pred CCCCCCccHHHHHHHcCCHHHHHHHHHcCCC------------------------cCCcCCCCCCHHHHHHc-CCHH-HH
Confidence 4466799999999999999999999999864 57789999999999999 7766 99
Q ss_pred HHhhcCCCCCCccccccccCCC-CCCHHHHHHHcCCHHHHHHHHHhhhhcC--CCCCceEeecC
Q 002922 705 DALTDDPGSVGIEAWKSAQDST-GLTPNDYASLRAHHSYIHLVQRKINKKS--SESGRVILDIP 765 (865)
Q Consensus 705 elLL~dp~~Ig~gA~VNakD~~-G~TPLHyAa~rGn~eiIeLL~~K~~~~~--~~~~~v~l~i~ 765 (865)
++|++. ++++|.+|.. |+||||+|+.+|+.+++++|+++..+.. ...|.++|+++
T Consensus 61 ~~Ll~~------g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A 118 (136)
T 1d9s_A 61 ELLLLH------GAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLA 118 (136)
T ss_dssp HHHHHH------TCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHH
T ss_pred HHHHHC------CCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHH
Confidence 999874 5889999999 9999999999999999999998865422 03455555553
No 98
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.72 E-value=9.4e-18 Score=154.34 Aligned_cols=107 Identities=24% Similarity=0.297 Sum_probs=91.3
Q ss_pred hhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHH
Q 002922 627 AILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDA 706 (865)
Q Consensus 627 ~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVel 706 (865)
...+.||||+||+.|+.++|++||++|++ +|.+|..|+||||+|+..++.+ ++++
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~------------------------~~~~~~~g~t~L~~A~~~~~~~-~v~~ 65 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGAD------------------------VNAKDEYGLTPLYLATAHGHLE-IVEV 65 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCC------------------------TTCCCTTSCCHHHHHHHHTCHH-HHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCC------------------------CCCcCCCCCCHHHHHHHcCCHH-HHHH
Confidence 34588999999999999999999999864 5778899999999999998776 9999
Q ss_pred hhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh---cCCCCCceEeecC
Q 002922 707 LTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK---KSSESGRVILDIP 765 (865)
Q Consensus 707 LL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~ 765 (865)
|++. ++++|.+|.+|.||||+|+.+|+.+++++|+++..+ +. .+|.++|+++
T Consensus 66 Ll~~------g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~tpl~~A 120 (136)
T 2jab_A 66 LLKN------GADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQD-KFGKTAFDIS 120 (136)
T ss_dssp HHHT------TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHH
T ss_pred HHHc------CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcCcC-CCCCCHHHHH
Confidence 9875 478899999999999999999999999999998554 23 3566666654
No 99
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.70 E-value=1.3e-17 Score=148.48 Aligned_cols=95 Identities=29% Similarity=0.327 Sum_probs=86.1
Q ss_pred hhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHH
Q 002922 627 AILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDA 706 (865)
Q Consensus 627 ~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVel 706 (865)
+..|+||||+|+..|+.+++++||++|++ +|.+|..|+||||+|+..++.+ ++++
T Consensus 6 d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------------------------~~~~d~~g~t~L~~A~~~~~~~-~~~~ 60 (115)
T 2l6b_A 6 SKDGNTPLHNAAKNGHAEEVKKLLSKGAD------------------------VNARSKDGNTPLHLAAKNGHAE-IVKL 60 (115)
T ss_dssp SCSSCCHHHHHHHHTCHHHHHHHTTTTCC------------------------SSCCCSSSCCTTHHHHTTTCHH-HHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------------------CCCcCCCCCCHHHHHHHcCcHH-HHHH
Confidence 56799999999999999999999999864 5778899999999999998776 9999
Q ss_pred hhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh
Q 002922 707 LTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK 752 (865)
Q Consensus 707 LL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~ 752 (865)
|++. ++++|.+|..|+||||+|+..|+.+++++|+++.++
T Consensus 61 Ll~~------g~~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~ 100 (115)
T 2l6b_A 61 LLAK------GADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGAD 100 (115)
T ss_dssp HTTT------TCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTSSS
T ss_pred HHHc------CCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence 9764 578899999999999999999999999999998665
No 100
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.70 E-value=4.6e-18 Score=179.78 Aligned_cols=123 Identities=12% Similarity=-0.037 Sum_probs=96.7
Q ss_pred hHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHH
Q 002922 590 WLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLV 669 (865)
Q Consensus 590 tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV 669 (865)
.++|.|+..+..+++++|++.+++.+.. .+..|+||||+|+..|+.++|++||++|++
T Consensus 99 ~~~~~a~~~~~~~~~~~l~~~g~dvn~~--------~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad-------------- 156 (327)
T 1sw6_A 99 QQQHVSFDSLLQEVNDAFPNTQLNLNIP--------VDEHGNTPLHWLTSIANLELVKHLVKHGSN-------------- 156 (327)
T ss_dssp -----CHHHHHHHHHHHCTTSCCCSCSC--------CSTTCCCHHHHHHHTTCHHHHHHHHHTTCC--------------
T ss_pred chhHHHHHhhHHHHHHHHHhcCCCcccc--------cCCCCCcHHHHHHHcCCHHHHHHHHHcCCC--------------
Confidence 4567888888889999998876543320 366799999999999999999999999864
Q ss_pred hhhcCCcccCCcccCCCCchHHHHHHhcCC---hHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHH----cCCHHH
Q 002922 670 DRAGSGFIFKPNVIGPAGLTPLHVAACRDD---AENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASL----RAHHSY 742 (865)
Q Consensus 670 ~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~---~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~----rGn~ei 742 (865)
+|.+|..|+||||+|+.+++ .+ +++.|++.. .+++|.+|.+|+||||+|+. .|+.++
T Consensus 157 ----------~n~~d~~g~TpLh~A~~~g~~~~~~-~~~~ll~~~-----~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~ 220 (327)
T 1sw6_A 157 ----------RLYGDNMGESCLVKAVKSVNNYDSG-TFEALLDYL-----YPCLILEDSMNRTILHHIIITSGMTGCSAA 220 (327)
T ss_dssp ----------TTBCCTTCCCHHHHHHHSSHHHHTT-CHHHHHHHH-----GGGGGEECTTCCCHHHHHHHHHTSTTCHHH
T ss_pred ----------CCCcCCCCCCHHHHHHHhcccccHH-HHHHHHHhh-----hccccCCCCCCCCHHHHHHHHccccccHHH
Confidence 67899999999999999865 23 455554421 25789999999999999999 899999
Q ss_pred HHHHHHhh
Q 002922 743 IHLVQRKI 750 (865)
Q Consensus 743 IeLL~~K~ 750 (865)
+++|++++
T Consensus 221 v~~Ll~~~ 228 (327)
T 1sw6_A 221 AKYYLDIL 228 (327)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998764
No 101
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.70 E-value=3.3e-17 Score=161.88 Aligned_cols=110 Identities=19% Similarity=0.188 Sum_probs=96.4
Q ss_pred hhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHH
Q 002922 627 AILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDA 706 (865)
Q Consensus 627 ~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVel 706 (865)
+..|.||||+|+.+|+.++|++||++|++ +|.+|..|+||||+||..++.+ +|++
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~------------------------~~~~~~~g~t~L~~A~~~~~~~-~v~~ 124 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDNRVG------------------------VNGLDKAGSTALYWACHGGHKD-IVEM 124 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHTTCC------------------------TTCCCTTSCCHHHHHHHTTCHH-HHHH
T ss_pred ccccccccccccccCcHHHHHHHHhCCCC------------------------ccccCCCCCCHHHHHHHcCCHH-HHHH
Confidence 45689999999999999999999999864 5778999999999999998776 9999
Q ss_pred hhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh---cCCCCCceEeecCCC
Q 002922 707 LTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK---KSSESGRVILDIPGS 767 (865)
Q Consensus 707 LL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~~~ 767 (865)
|++.+ ++++|.+|.+|+||||+|+.+|+.+++++|+++.++ +. .+|.++|+++..
T Consensus 125 Ll~~~-----g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~-~~g~t~l~~A~~ 182 (222)
T 3ehr_A 125 LFTQP-----NIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRN-IEKKLAFDMATN 182 (222)
T ss_dssp HTTST-----TCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCC-TTSCCHHHHCCS
T ss_pred HHcCC-----CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccc-CCCCCHHHHhcc
Confidence 98752 588999999999999999999999999999998664 33 578888888765
No 102
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.69 E-value=3.1e-17 Score=165.91 Aligned_cols=125 Identities=18% Similarity=0.153 Sum_probs=96.8
Q ss_pred HHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCccc
Q 002922 604 VKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVI 683 (865)
Q Consensus 604 vklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~ 683 (865)
++.||+.+.+.+.. ...+..+.||||+|+..|+.++|++||++|++ +|.+
T Consensus 1 v~~ll~~~~~~~~~------~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~------------------------~~~~ 50 (229)
T 2vge_A 1 MRSVLRKAGSPRKA------RRARLNPLVLLLDAALTGELEVVQQAVKEMND------------------------PSQP 50 (229)
T ss_dssp ---------CCCCC------CCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSC------------------------TTCC
T ss_pred CeehhccCCCCccc------cccccchhHHHHHHHHcCCHHHHHHHHhcCCC------------------------CCCC
Confidence 35677776543321 12245688999999999999999999999864 6788
Q ss_pred CCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhhcC---CCCCce
Q 002922 684 GPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKS---SESGRV 760 (865)
Q Consensus 684 d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~~~---~~~~~v 760 (865)
|..|+||||+||..++.+ +|++|++. |+++|.+|.+|+||||+|+.+|+.+++++|+++.++.. ...|.+
T Consensus 51 d~~g~tpLh~A~~~g~~~-~v~~Ll~~------ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t 123 (229)
T 2vge_A 51 NEEGITALHNAICGANYS-IVDFLITA------GANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGAT 123 (229)
T ss_dssp CTTSCCHHHHHHHTTCHH-HHHHHHHT------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCC
T ss_pred CCCCCCHHHHHHHcCCHH-HHHHHHHC------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCC
Confidence 999999999999998776 99999875 58899999999999999999999999999999866532 137888
Q ss_pred EeecC
Q 002922 761 ILDIP 765 (865)
Q Consensus 761 ~l~i~ 765 (865)
+|+++
T Consensus 124 pL~~A 128 (229)
T 2vge_A 124 AFEKC 128 (229)
T ss_dssp TGGGC
T ss_pred HHHHH
Confidence 88887
No 103
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.69 E-value=5.7e-17 Score=145.11 Aligned_cols=90 Identities=26% Similarity=0.226 Sum_probs=80.8
Q ss_pred HhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHH
Q 002922 626 LAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLD 705 (865)
Q Consensus 626 ~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVe 705 (865)
.+..|.|+||+|+.+|+.++|++||++|++ +|.+|..|+||||+|+..++.+ +++
T Consensus 20 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~------------------------i~~~d~~g~tpLh~A~~~~~~~-~v~ 74 (110)
T 2zgd_A 20 MGSDLGKKLLEAARAGQDDEVRILMANGAD------------------------VAAKDKNGSTPLHLAARNGHLE-VVK 74 (110)
T ss_dssp --CCHHHHHHHHHHHTCHHHHHHHHHTTCC------------------------TTCCCTTCCCHHHHHHHTTCHH-HHH
T ss_pred cCCccchHHHHHHHcCCHHHHHHHHHcCCC------------------------CCccCCCCCCHHHHHHHcCCHH-HHH
Confidence 456799999999999999999999999864 5778999999999999998776 999
Q ss_pred HhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHH
Q 002922 706 ALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLV 746 (865)
Q Consensus 706 lLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL 746 (865)
+|++. ++++|.+|..|+||||+|+.+|+.+++++|
T Consensus 75 ~Ll~~------ga~~~~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 75 LLLEA------GADVXAQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHT------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHHHc------CCCccccccCCCcHHHHHHHcCCHHHHHHh
Confidence 99874 478899999999999999999999999987
No 104
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.69 E-value=4.8e-17 Score=144.23 Aligned_cols=106 Identities=30% Similarity=0.347 Sum_probs=89.2
Q ss_pred ccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhh
Q 002922 629 LEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALT 708 (865)
Q Consensus 629 ~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL 708 (865)
.|+||||+|++.|+.++|++|+++|++ ++..+..|.||||+|+..++.+ ++++|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~------------------------~~~~~~~g~t~L~~A~~~~~~~-~~~~Ll 55 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD------------------------VNAKDKNGRTPLHLAARNGHLE-VVKLLL 55 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCC------------------------TTCCCTTSCCHHHHHHHHTCHH-HHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCC------------------------CCCcCCCCCcHHHHHHHcCcHH-HHHHHH
Confidence 378999999999999999999999864 5678889999999999998776 999998
Q ss_pred cCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhhcC--CCCCceEeecC
Q 002922 709 DDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKS--SESGRVILDIP 765 (865)
Q Consensus 709 ~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~~~--~~~~~v~l~i~ 765 (865)
+. +++++.+|..|.||||+|+..|+.+++++|+++..+.. ...|.++|+++
T Consensus 56 ~~------g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A 108 (126)
T 1n0r_A 56 EA------GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLA 108 (126)
T ss_dssp HT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred Hc------CCCCcccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCcccCCCCCCHHHHH
Confidence 75 47789999999999999999999999999998755421 03455555553
No 105
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.67 E-value=7.5e-17 Score=155.78 Aligned_cols=109 Identities=17% Similarity=0.142 Sum_probs=94.2
Q ss_pred HhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHH
Q 002922 626 LAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLD 705 (865)
Q Consensus 626 ~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVe 705 (865)
.+..|.||||+|++.|+.++|++||+ |++ +|.+|..|+||||+|+..++.+ +++
T Consensus 40 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~------------------------~~~~d~~g~t~L~~A~~~~~~~-~v~ 93 (183)
T 3deo_A 40 VVSEYETPWWTAARKADEQALSQLLE-DRD------------------------VDAVDENGRTALLFVAGLGSDK-CVR 93 (183)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHTT-TSC------------------------TTCCCTTSCCHHHHHHHHTCHH-HHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHh-cCC------------------------CCCcCCCCCCHHHHHHHcCCHH-HHH
Confidence 45679999999999999999999999 753 6788999999999999998876 999
Q ss_pred HhhcCCCCCCccccccccC-CCCCCHHHHHHHcCCHHHHHHHHHhhhh---cCCCCCceEeecCCC
Q 002922 706 ALTDDPGSVGIEAWKSAQD-STGLTPNDYASLRAHHSYIHLVQRKINK---KSSESGRVILDIPGS 767 (865)
Q Consensus 706 lLL~dp~~Ig~gA~VNakD-~~G~TPLHyAa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~~~ 767 (865)
+|++. ++++|.+| .+|+||||+|+.+|+.+++++|+++.++ +. .+|.++|+++..
T Consensus 94 ~Ll~~------ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d-~~g~tpl~~A~~ 152 (183)
T 3deo_A 94 LLAEA------GADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVED-ERGLTALELARE 152 (183)
T ss_dssp HHHHT------TCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCC-TTSCCHHHHHHH
T ss_pred HHHHc------CCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCC-CCCCCHHHHHHH
Confidence 99875 47889999 8899999999999999999999998654 34 567788887643
No 106
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.66 E-value=4.6e-17 Score=153.08 Aligned_cols=106 Identities=23% Similarity=0.245 Sum_probs=90.2
Q ss_pred hhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHH
Q 002922 627 AILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDA 706 (865)
Q Consensus 627 ~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVel 706 (865)
+..|.||||+|++.|+.++|++||++|++ +|.+|..|+||||+|+ .++.+ ++++
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~------------------------~~~~~~~g~t~L~~A~-~~~~~-~v~~ 62 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLEAGAN------------------------PNAPNSYGRRPIQVMM-MGSAR-VAEL 62 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHTTTCC------------------------TTCCCSSSCCTTTSSC-TTCHH-HHHH
T ss_pred CccchHHHHHHHHcCCHHHHHHHHHcCCC------------------------CCCCCCCCCCHHHHHH-cCCHH-HHHH
Confidence 45689999999999999999999999864 5778899999999985 66655 9999
Q ss_pred hhcCCCCCCccccccccCCCCCC-HHHHHHHcCCHHHHHHHHHhhhh---cCCCCCceEeecC
Q 002922 707 LTDDPGSVGIEAWKSAQDSTGLT-PNDYASLRAHHSYIHLVQRKINK---KSSESGRVILDIP 765 (865)
Q Consensus 707 LL~dp~~Ig~gA~VNakD~~G~T-PLHyAa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~ 765 (865)
|++. ++++|.+|..|+| |||+|+.+|+.+++++|+++.++ +. ..|.++|+++
T Consensus 63 Ll~~------g~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d-~~g~tpl~~A 118 (156)
T 1bi7_B 63 LLLH------GAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRD-AWGRLPVDLA 118 (156)
T ss_dssp HHTT------TCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCC-TTCCCHHHHH
T ss_pred HHHc------CCCCCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccC-CCCCCHHHHH
Confidence 9874 5889999999999 99999999999999999998654 33 4566777765
No 107
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.64 E-value=2.4e-16 Score=160.10 Aligned_cols=109 Identities=17% Similarity=0.142 Sum_probs=94.7
Q ss_pred HhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHH
Q 002922 626 LAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLD 705 (865)
Q Consensus 626 ~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVe 705 (865)
.+..|.||||+|++.|+.++|++||+ |++ +|.+|..|+||||+||..++.+ +|+
T Consensus 41 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~------------------------~~~~d~~g~t~L~~A~~~g~~~-~v~ 94 (244)
T 3ui2_A 41 VVSEYETPWWTAARKADEQALSQLLE-DRD------------------------VDAVDENGRTALLFVAGLGSDK-CVR 94 (244)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHTTT-TCC------------------------TTCBCTTSCBHHHHHHHHTCHH-HHH
T ss_pred cccCCCCHHHHHHHcCCHHHHHHHHc-CCC------------------------CCCcCCCCCCHHHHHHHCCCHH-HHH
Confidence 34568999999999999999999999 754 6788999999999999998876 999
Q ss_pred HhhcCCCCCCccccccccC-CCCCCHHHHHHHcCCHHHHHHHHHhhhh---cCCCCCceEeecCCC
Q 002922 706 ALTDDPGSVGIEAWKSAQD-STGLTPNDYASLRAHHSYIHLVQRKINK---KSSESGRVILDIPGS 767 (865)
Q Consensus 706 lLL~dp~~Ig~gA~VNakD-~~G~TPLHyAa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~~~ 767 (865)
+|++. ++++|.+| .+|+||||+|+.+|+.+++++|+++.++ +. .+|.++|+++..
T Consensus 95 ~Ll~~------ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d-~~g~t~l~~A~~ 153 (244)
T 3ui2_A 95 LLAEA------GADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVED-ERGLTALELARE 153 (244)
T ss_dssp HHHHT------TCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTCCCHHHHHHH
T ss_pred HHHHc------CCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCCcHHHHHHH
Confidence 99875 58889999 7899999999999999999999998554 34 578888888743
No 108
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.64 E-value=1.8e-16 Score=141.08 Aligned_cols=105 Identities=24% Similarity=0.147 Sum_probs=88.7
Q ss_pred ccchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhH
Q 002922 587 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQK 666 (865)
Q Consensus 587 R~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k 666 (865)
..+++||+|+..|..++++.||+.+++.+ ..+..|.||||+|+..++.++|++||++|++
T Consensus 8 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~---------~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~----------- 67 (115)
T 2l6b_A 8 DGNTPLHNAAKNGHAEEVKKLLSKGADVN---------ARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD----------- 67 (115)
T ss_dssp SSCCHHHHHHHHTCHHHHHHHTTTTCCSS---------CCCSSSCCTTHHHHTTTCHHHHHHHTTTTCC-----------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCC---------CcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-----------
Confidence 34699999999999999999998875422 2356799999999999999999999999864
Q ss_pred HHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHH
Q 002922 667 QLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPN 731 (865)
Q Consensus 667 ~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPL 731 (865)
+|.+|..|+||||+|+..++.+ ++++|++. ||++|.+|..|.||-
T Consensus 68 -------------~~~~d~~g~tpl~~A~~~~~~~-~~~~Ll~~------ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 68 -------------VNARSKDGNTPEHLAKKNGHHE-IVKLLDAK------GADVNARSWGSSHHH 112 (115)
T ss_dssp -------------TTCCCTTCCCTTHHHHTTTCHH-HHHHHHTT------SSSHHHHSCCCC---
T ss_pred -------------CcccCCCCCCHHHHHHHCCCHH-HHHHHHHc------CCCCCcCCccccccc
Confidence 5778899999999999998766 99999874 588999999999984
No 109
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.63 E-value=1.1e-15 Score=132.10 Aligned_cols=89 Identities=30% Similarity=0.274 Sum_probs=77.7
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHH
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 668 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~L 668 (865)
+++||+|+..|+.+++++||+.+++.+ ..+..|+||||+|+.+|+.++|++||++|++
T Consensus 3 ~t~L~~A~~~~~~~~v~~Ll~~g~~~n---------~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~------------- 60 (93)
T 1n0q_A 3 RTPLHLAARNGHLEVVKLLLEAGADVN---------AKDKNGRTPLHLAARNGHLEVVKLLLEAGAD------------- 60 (93)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTT---------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-------------
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCc---------ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-------------
Confidence 589999999999999999999875432 2356799999999999999999999999864
Q ss_pred HhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCC
Q 002922 669 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDP 711 (865)
Q Consensus 669 V~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp 711 (865)
+|.+|..|+||||+|+..++.+ ++++|++.+
T Consensus 61 -----------~~~~d~~g~t~l~~A~~~~~~~-~~~~Ll~~g 91 (93)
T 1n0q_A 61 -----------VNAKDKNGRTPLHLAARNGHLE-VVKLLLEAG 91 (93)
T ss_dssp -----------TTCCCTTSCCHHHHHHHTTCHH-HHHHHHHTT
T ss_pred -----------CCccCCCCCCHHHHHHHcCCHH-HHHHHHHcC
Confidence 5788999999999999998766 999998754
No 110
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.62 E-value=6e-17 Score=177.61 Aligned_cols=138 Identities=12% Similarity=0.052 Sum_probs=102.9
Q ss_pred chHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHH
Q 002922 589 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 668 (865)
Q Consensus 589 ~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~L 668 (865)
+++||+|+..|+.++++.||+.++.... ....+..|.||||+|+++|+.++|++||++|++..
T Consensus 93 ~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~------~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~----------- 155 (376)
T 2aja_A 93 EVICFVAAITGCSSALDTLCLLLTSDEI------VKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEI----------- 155 (376)
T ss_dssp HHHHHHHHHHCCHHHHHHHTTC--CCSS------CC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTH-----------
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCcHHH------HHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCcc-----------
Confidence 4999999999999999999988752111 11224467899999999999999999999997521
Q ss_pred HhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccc--cCCCCCCHHHHHH-HcCCHHHHHH
Q 002922 669 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSA--QDSTGLTPNDYAS-LRAHHSYIHL 745 (865)
Q Consensus 669 V~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNa--kD~~G~TPLHyAa-~rGn~eiIeL 745 (865)
..+++..+ +||||+||..|+.+ +|++|++. ||+++. +|..|+||||+|+ .+|+.+++++
T Consensus 156 --------~~~i~~~~---~TpLh~Aa~~G~~e-iv~~Ll~~------ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~ 217 (376)
T 2aja_A 156 --------MAMIQAEN---YHAFRLAAENGHLH-VLNRLCEL------APTEATAMIQAENYYAFRWAAVGRGHHNVINF 217 (376)
T ss_dssp --------HHHHSHHH---HHHHHHHHHTTCHH-HHHHHHHS------CGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHH
T ss_pred --------ccccCCCC---CCHHHHHHHCCCHH-HHHHHHHc------CCccchhccCCCCCCHHHHHHHHCCCHHHHHH
Confidence 01123333 89999999887766 89988764 466676 8888999999999 8999999998
Q ss_pred HHHhhhhcCCCCCceEeecCC
Q 002922 746 VQRKINKKSSESGRVILDIPG 766 (865)
Q Consensus 746 L~~K~~~~~~~~~~v~l~i~~ 766 (865)
|+++.+ .+.++|+++.
T Consensus 218 Ll~~ga-----~~~taL~~Aa 233 (376)
T 2aja_A 218 LLDCPV-----MLAYAEIHEF 233 (376)
T ss_dssp HTTSHH-----HHHHHHHCTT
T ss_pred HHhCCC-----ccchHHHHHH
Confidence 887653 3556666654
No 111
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.60 E-value=5.4e-16 Score=163.87 Aligned_cols=107 Identities=20% Similarity=0.074 Sum_probs=84.9
Q ss_pred cchHHHHHHHC---CCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchh
Q 002922 588 FKWLLEFSMEH---DWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSR 664 (865)
Q Consensus 588 ~~tLL~fAver---g~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~ 664 (865)
.+++||+|+.. |..+++++||+.+++ ++ ..+..|+||||+|+..|+.++|++||++|++
T Consensus 190 g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad--vn-------~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad--------- 251 (301)
T 2b0o_E 190 EELVLHLAVKVANQASLPLVDFIIQNGGH--LD-------AKAADGNTALHYAALYNQPDCLKLLLKGRAL--------- 251 (301)
T ss_dssp EECHHHHHHHTCCTTTHHHHHHHHHHSSC--TT-------CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC---------
T ss_pred CccHHHHHHHhcccCcHHHHHHHHhcCCC--CC-------CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---------
Confidence 46999999987 899999999999754 32 2356799999999999999999999999864
Q ss_pred hHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCH
Q 002922 665 QKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHH 740 (865)
Q Consensus 665 ~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~ 740 (865)
+|++|..|+||||+|+..++.+ ++++|++. +++ .|.||||+|+..|+.
T Consensus 252 ---------------~~~~d~~G~TpL~~A~~~~~~~-iv~~Ll~~------ga~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 252 ---------------VGTVNEAGETALDIARKKHHKE-CEELLEQA------QAG------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp ---------------CSCCCTTSCCHHHHHHHHTCHH-HHHHHHHH------HHH------TTSSCCC--------
T ss_pred ---------------CCCcCCCCCCHHHHHHHcCCHH-HHHHHHHh------cCC------CCCChhHHHHhcCCc
Confidence 6788999999999999998766 99999763 332 689999999998874
No 112
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.55 E-value=4.4e-16 Score=170.76 Aligned_cols=122 Identities=15% Similarity=0.094 Sum_probs=98.9
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHH
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 667 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~ 667 (865)
-.++||+|+.+|+.++|++||+.+++... ....+. +.||||+|+.+|+.+||++||++|++
T Consensus 128 ~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~------~~i~~~-~~TpLh~Aa~~G~~eiv~~Ll~~ga~------------ 188 (376)
T 2aja_A 128 NYQAFRLAAENGHLHVLNRLCELAPTEIM------AMIQAE-NYHAFRLAAENGHLHVLNRLCELAPT------------ 188 (376)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHSCTTTHH------HHHSHH-HHHHHHHHHHTTCHHHHHHHHHSCGG------------
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCCCCccc------cccCCC-CCCHHHHHHHCCCHHHHHHHHHcCCc------------
Confidence 35799999999999999999998743110 001112 28999999999999999999999864
Q ss_pred HHhhhcCCcccCCcc--cCCCCchHHHHHH-hcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHH
Q 002922 668 LVDRAGSGFIFKPNV--IGPAGLTPLHVAA-CRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIH 744 (865)
Q Consensus 668 LV~~~s~~y~~d~Na--~d~~G~TPLHlAA-~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIe 744 (865)
++. +|..|+||||+|| .+|+.+ +|++|++++ + .|.||||+|+.+|+.++++
T Consensus 189 ------------~~~~~~d~~g~TpL~~Aa~~~G~~e-iv~~Ll~~g------a-------~~~taL~~Aa~~g~~evv~ 242 (376)
T 2aja_A 189 ------------EATAMIQAENYYAFRWAAVGRGHHN-VINFLLDCP------V-------MLAYAEIHEFEYGEKYVNP 242 (376)
T ss_dssp ------------GHHHHHHHHHHHHHHHHHSTTCCHH-HHHHHTTSH------H-------HHHHHHHCTTTTTTTTHHH
T ss_pred ------------cchhccCCCCCCHHHHHHHHCCCHH-HHHHHHhCC------C-------ccchHHHHHHHCCCHHHHH
Confidence 333 6777999999999 988766 999998743 2 2899999999999999999
Q ss_pred HHHHhhhhcC
Q 002922 745 LVQRKINKKS 754 (865)
Q Consensus 745 LL~~K~~~~~ 754 (865)
+|.++.++..
T Consensus 243 lL~~~ga~~~ 252 (376)
T 2aja_A 243 FIARHVNRLK 252 (376)
T ss_dssp HHHHHHHHHH
T ss_pred HHHhcCcccc
Confidence 9999877643
No 113
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.49 E-value=3.9e-14 Score=147.86 Aligned_cols=111 Identities=21% Similarity=0.155 Sum_probs=92.3
Q ss_pred cccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccCCCCchHHHHHHhc---CChHHHHHH
Q 002922 630 EMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACR---DDAENVLDA 706 (865)
Q Consensus 630 G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~---~~~e~IVel 706 (865)
..++||.|+..|+.+.++.|++.|++++. .+.++..|..|+||||+||.. ++.+ ++++
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~------------------~~~l~~~~~~g~t~Lh~A~~~~~~~~~~-~v~~ 190 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLTE------------------KIPLANGHEPDETALHLAVRSVDRTSLH-IVDF 190 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTS------------------BCCCSSCSSTTCBHHHHHHHHCCTTTHH-HHHH
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchhh------------------hccccccccCCCCcchHHHHhcccchHH-HHHH
Confidence 45899999999999999999999987531 112567788999999999998 5555 9999
Q ss_pred hhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh---cCCCCCceEeecCC
Q 002922 707 LTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK---KSSESGRVILDIPG 766 (865)
Q Consensus 707 LL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~~ 766 (865)
|++. ||++|.+|.+|+||||+|+.+|+.+++++|+++.++ +. .+|.|+|+++.
T Consensus 191 Ll~~------ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d-~~g~tpL~~A~ 246 (278)
T 1dcq_A 191 LVQN------SGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIAN-ESGETPLDIAK 246 (278)
T ss_dssp HHHH------CSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHH
T ss_pred HHHC------CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcc-CCCCCHHHHHH
Confidence 9874 588999999999999999999999999999998665 33 46677777753
No 114
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.48 E-value=3.1e-14 Score=155.85 Aligned_cols=106 Identities=23% Similarity=0.219 Sum_probs=92.0
Q ss_pred ccccHHHHHHHc-CCHHHHHHHHhcCCCCCCCCCchhhHHHHhhhcCCcccCCcccC--CCCchHHHHHHhcCChHHHHH
Q 002922 629 LEMGLLHKAVRR-NCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIG--PAGLTPLHVAACRDDAENVLD 705 (865)
Q Consensus 629 ~G~TpLH~AV~~-gn~eIVELLL~~Gadi~~dg~~~~~k~LV~~~s~~y~~d~Na~d--~~G~TPLHlAA~~~~~e~IVe 705 (865)
.+.|+||+|+.. ++.++|++||++|++ +|..+ ..|+||||+||..++.+ +|+
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gad------------------------vn~~~~~~~g~TpLh~Aa~~g~~~-iv~ 252 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGAD------------------------VNWVNGGQDNATPLIQATAANSLL-ACE 252 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCC------------------------TTCCCTTTTCCCHHHHHHHTTCHH-HHH
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCC------------------------CCccccccCCCCHHHHHHHCCCHH-HHH
Confidence 467999999999 999999999999875 45555 78999999999998766 999
Q ss_pred HhhcCCCCCCccccccccCCCCCCHHHHHHHcCCHHHHHHHHHhhhh---cCCCCCceEeecCC
Q 002922 706 ALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK---KSSESGRVILDIPG 766 (865)
Q Consensus 706 lLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~rGn~eiIeLL~~K~~~---~~~~~~~v~l~i~~ 766 (865)
+|++. +|++|.+|.+|+||||+|+..|+.+++++|+++.++ +. .+|.++|+++.
T Consensus 253 ~LL~~------Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d-~~G~TpL~~A~ 309 (368)
T 3jue_A 253 FLLQN------GANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARD-SEGRDPLTIAM 309 (368)
T ss_dssp HHHHT------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHH
T ss_pred HHHHc------CCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcC-CCCCCHHHHHH
Confidence 99875 488999999999999999999999999999998654 33 56788888863
No 115
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.47 E-value=1.2e-13 Score=123.49 Aligned_cols=86 Identities=19% Similarity=0.097 Sum_probs=75.0
Q ss_pred cchHHHHHHHCCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCchhhHH
Q 002922 588 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 667 (865)
Q Consensus 588 ~~tLL~fAverg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~~~k~ 667 (865)
..++||+|+..|+.++++.||+.+++.+ ..+..|+||||+|+..|+.++|++||++|++
T Consensus 24 g~t~L~~A~~~g~~~~v~~Ll~~g~~i~---------~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~------------ 82 (110)
T 2zgd_A 24 LGKKLLEAARAGQDDEVRILMANGADVA---------AKDKNGSTPLHLAARNGHLEVVKLLLEAGAD------------ 82 (110)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCTT---------CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC------------
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCCCCC---------ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------
Confidence 5699999999999999999998865422 2356799999999999999999999999864
Q ss_pred HHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHh
Q 002922 668 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDAL 707 (865)
Q Consensus 668 LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelL 707 (865)
+|.+|..|+||||+|+..++.+ ++++|
T Consensus 83 ------------~~~~d~~g~tpl~~A~~~~~~~-~~~~L 109 (110)
T 2zgd_A 83 ------------VXAQDKFGKTAFDISIDNGNED-LAEIL 109 (110)
T ss_dssp ------------TTCCCTTSCCHHHHHHHHTCHH-HHHHH
T ss_pred ------------ccccccCCCcHHHHHHHcCCHH-HHHHh
Confidence 5778999999999999998776 88887
No 116
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.45 E-value=1.1e-13 Score=155.37 Aligned_cols=104 Identities=19% Similarity=0.073 Sum_probs=79.5
Q ss_pred ccchHHHHHHH---CCCHHHHHHHHHhhccCCccCCCCCchHHhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCch
Q 002922 587 RFKWLLEFSME---HDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGS 663 (865)
Q Consensus 587 R~~tLL~fAve---rg~~aVvklLLd~ga~anV~~~~~s~~~~~~~G~TpLH~AV~~gn~eIVELLL~~Gadi~~dg~~~ 663 (865)
...++||+|+. .|+.+++++||+.+++.| ..|..|+||||+|+.+|+.++|++||++|+|
T Consensus 170 ~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn---------~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~-------- 232 (497)
T 3lvq_E 170 PEELVLHLAVKVANQASLPLVDFIIQNGGHLD---------AKAADGNTALHYAALYNQPDCLKLLLKGRAL-------- 232 (497)
T ss_dssp SCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTT---------CCCSSSCCHHHHHTTTTCHHHHHHHHHTCCC--------
T ss_pred ccchHHHHHHHhcccccHHHHHHHHHcCCCCC---------ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC--------
Confidence 35699999976 899999999999885433 2356799999999999999999999999875
Q ss_pred hhHHHHhhhcCCcccCCcccCCCCchHHHHHHhcCChHHHHHHhhcCCCCCCccccccccCCCCCCHHHHHHH
Q 002922 664 RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASL 736 (865)
Q Consensus 664 ~~k~LV~~~s~~y~~d~Na~d~~G~TPLHlAA~~~~~e~IVelLL~dp~~Ig~gA~VNakD~~G~TPLHyAa~ 736 (865)
+|++|..|+||||+|+..++.+ ++++|++. ||++|. ||+|++..
T Consensus 233 ----------------~~~~d~~g~tpl~~A~~~~~~~-~~~~Ll~~------ga~~~~------~~~h~~~~ 276 (497)
T 3lvq_E 233 ----------------VGTVNEAGETALDIARKKHHKE-CEELLEQA------QAGTFA------FPLHVDYS 276 (497)
T ss_dssp ----------------CSCCCTTCCCHHHHHHHTTCHH-HHHHHHHT------CC------------------
T ss_pred ----------------CCCcCCCCCCHHHHHHHcCCHH-HHHHHHHh------CCCCCC------Ccceeecc
Confidence 6889999999999999998766 99999875 466666 57776654
No 117
>1wj0_A Squamosa promoter-binding protein-like 12; DNA-binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.72.1.1
Probab=99.35 E-value=8.7e-14 Score=116.61 Aligned_cols=31 Identities=84% Similarity=1.398 Sum_probs=30.1
Q ss_pred CCCCCcEEEECCchhhhhhhccCCcCCcccc
Q 002922 1 MHSKATKALVGNVMQRFCQQCSRFHVLQEFD 31 (865)
Q Consensus 1 ~H~~a~~v~~~g~~~RfCQqC~rfh~l~eFd 31 (865)
.|+||++|+++|.++||||||+|||+|+|||
T Consensus 30 ~H~ka~~v~~~G~~~RFCQQCsrFH~L~eFD 60 (60)
T 1wj0_A 30 IHSKATTALVGGIMQRFCQQCSRFHVLEEFD 60 (60)
T ss_dssp HHHTCSCEEETTEEECCCSSSCSCCBTTSCC
T ss_pred hHcCCCEEEECCEEEehhhhccCccCcccCC
Confidence 4999999999999999999999999999998
No 118
>2cxk_A Camta1, calmodulin binding transcription activator 1; structural genomics, TIG/IPT domain, NPPSFA; 1.85A {Homo sapiens} SCOP: b.1.18.1
Probab=53.51 E-value=59 Score=29.16 Aligned_cols=77 Identities=14% Similarity=0.110 Sum_probs=52.5
Q ss_pred ceeeeeeceeeecCceeEEEEEeccCCCCCceEEEEecCceeEEEeeccccCCCCcccccCcceeecccCCCCCCCCceE
Q 002922 419 CRISSIKPIAVPVSERVKFVVKGFNLSRSTTRLLCAIEGSYLVQETCYDLMGGADTVNENDELQCLSFPCSIPNVFGRGF 498 (865)
Q Consensus 419 p~i~~V~P~av~ag~~~~~~v~G~NL~~p~~rlLc~~~GkYl~~e~~~~~~~g~~~~~~~~~~~~~~f~~~~P~~~G~~f 498 (865)
=.|..++|-+-..+..+.+.|+|.+|.. +.++-|.|++.-..+|... + ..+.|. ..|...|++=
T Consensus 7 ~~Itd~sP~~gp~sGGTkv~I~G~~L~~-gs~~~~~fG~~~vpa~~~s---~--------~vl~C~----tPp~~~G~v~ 70 (95)
T 2cxk_A 7 GMVTDYSPEWSYPEGGVKVLITGPWQEA-SNNYSCLFDQISVPASLIQ---P--------GVLRCY----CPAHDTGLVT 70 (95)
T ss_dssp SCCCEEECSEECTTCCCEEEEESSCCCC-SSCEEEEETTEEEECEEEE---T--------TEEEEE----CCCCCSEEEE
T ss_pred EEEEEECCCcccCCCCEEEEEEeECCCC-CccEEEEECCEEEeEEEeE---C--------CEEEEE----ecCCCCceEe
Confidence 3899999999999999999999999965 4589999988665555532 1 233444 2234567776
Q ss_pred EEEecCC-ccCCce
Q 002922 499 IEVEDHG-LSSSFV 511 (865)
Q Consensus 499 IEVE~~g-~~S~~~ 511 (865)
|.|.-+| ..|...
T Consensus 71 ~~v~~d~~~~s~~~ 84 (95)
T 2cxk_A 71 LQVAFNNQIISNSV 84 (95)
T ss_dssp EEEEETTEECSCCE
T ss_pred EEEEECCeecCCce
Confidence 6665444 334433
No 119
>1uad_C RSEC5, exocyst complex component SEC5; small GTP-binding protein, immunogloblin-like fold, beta- sandwich, endocytosis/exocytosis complex; HET: GNP; 2.10A {Rattus norvegicus} SCOP: b.1.18.18 PDB: 1hk6_A
Probab=36.76 E-value=34 Score=30.72 Aligned_cols=39 Identities=26% Similarity=0.229 Sum_probs=31.7
Q ss_pred cceeeeeeceeeecCceeEEEEEeccCCCCCceE-EEEecCc
Q 002922 418 SCRISSIKPIAVPVSERVKFVVKGFNLSRSTTRL-LCAIEGS 458 (865)
Q Consensus 418 ~p~i~~V~P~av~ag~~~~~~v~G~NL~~p~~rl-Lc~~~Gk 458 (865)
.|+|..++|..-..| +.+.++|.||......+ -+...|.
T Consensus 7 ~P~It~i~P~~Gp~G--T~vTI~G~nlg~~~sdv~~V~vgg~ 46 (99)
T 1uad_C 7 PPLVTGISPNEGIPW--TKVTIRGENLGTGPTDLIGLTICGH 46 (99)
T ss_dssp CCEEEEEESSEESTT--CEEEEEEECSCSSGGGEEEEEETTE
T ss_pred CCEEEEEECCCcCCC--CEEEEEEEeCCCCcccceEEEECCE
Confidence 479999999887555 99999999998776655 4778873
No 120
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=22.18 E-value=1.8e+02 Score=31.85 Aligned_cols=72 Identities=18% Similarity=0.225 Sum_probs=49.4
Q ss_pred CCcc-eeeeeeceeeecCceeEEEEEeccCCCCCceEEEEecCceeEEEeeccccCCCCcccccCcceeecccCCCCCCC
Q 002922 416 HKSC-RISSIKPIAVPVSERVKFVVKGFNLSRSTTRLLCAIEGSYLVQETCYDLMGGADTVNENDELQCLSFPCSIPNVF 494 (865)
Q Consensus 416 ~~~p-~i~~V~P~av~ag~~~~~~v~G~NL~~p~~rlLc~~~GkYl~~e~~~~~~~g~~~~~~~~~~~~~~f~~~~P~~~ 494 (865)
|..| +|..+.|..- +..+++++.|.|+......+-+.|.|+-... ... . .+.|.|. .|...
T Consensus 16 ~~~p~~i~~~~P~~g--~~~~~~~i~G~nfg~~~~~~~v~~~~~~a~v--~~~--~-------~~~i~~~-----vp~~~ 77 (433)
T 4hw6_A 16 PKEEIVVEKFLPTEG--RKGTRVVVYGRNFGNDVSKVKVTIGGYPAKV--INV--K-------GESLLCI-----CPSKA 77 (433)
T ss_dssp TTSCCEEEEEESSEE--CTTCEEEEEEECCCSCGGGEEEEETTEEEEE--EEE--C-------SSEEEEE-----CCTTC
T ss_pred CCCCCEEEEECCCCC--CCCCEEEEEeECCCCCcceeEEEECCEEEEE--EEe--C-------CCEEEEE-----eCCCC
Confidence 3344 9999999874 6678899999999987889999999965442 221 1 2345554 56554
Q ss_pred --CceEEEEecCC
Q 002922 495 --GRGFIEVEDHG 505 (865)
Q Consensus 495 --G~~fIEVE~~g 505 (865)
|.+-|+|+.++
T Consensus 78 ~~g~~~v~v~~~~ 90 (433)
T 4hw6_A 78 YEGDVKVSVVGDD 90 (433)
T ss_dssp TTCCEEEEEECTT
T ss_pred CCCCEEEEEecCC
Confidence 56666666543
Done!