Citrus Sinensis ID: 002925

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-----
MAPPNDPANALLTKLAPNRPGKHIGLSNGKLCVKGFPVLSDVPSNVSFTPFSLSKSSDAPLPVIQAVQANSHKGGFLGFKAQEPSDRLMNSLGRFSGRDFVSIFRFKTWWSTQWVGNSGSDLQMETQWVLLDVPETTSYVMIIPIIESSFRSALHPGTDDHVMICAESGSTRLKASSFDAIAYVHVSDNPYNIMKEACSALRVHLNTFRLLEEKQVPSLVDKFGWCTWDAFYLTVEPAGVWQGVKDFVDGGISPRFLIIDDGWQSINRDDENPNEDSKNLVLGGEQMTARLHRLDESEKFRKYKGGSLLAPNAPSFDIKRPKMLINKAIELEHANKARDKAIRSGVTDLFEFDSKINNLKKELEEMFGGEESGNSVNEGCGRCSCKADNYGMKAFTRDLRTRFKGLDDIWVWHALCGAWGGVRPGTTHLNSKIIPCNLSPGLDGTMDDLAVVKIVEGGIGLVHPSQADDFYDSMYSYLAQAGITGVKVDVIHTLEYVSEEYGGRVELGKAYYKGLSNSLKKNFKGTGLISSMQQCNDFFFLGTRQISMGRVGDDFWFQDPNGDPNGVYWLQGVHMIHCSYNSLWMGQFIQPDWDMFQSDHCCAKFHAGSRAICGGPVYVSDSVGGHDFDLLKQLVYPDGTIPRCQHFALPTRDCLFRNPLFDKKTILKIWNFNKYGGVIGAFNCQGSGWDMKERRIKGYAECYKPVSGTVHVTDIEWDQNAEAAHLGEAEEYIVYLSQADKIHLVTPKSEAIKITLQPSSFELFNFVPIKKVGPDIKFAPVGITDMFNNGGTIREWAHSESGPEIRVKVEVKGGGNFLAYSTGSPKKCYLNGAEVAFEWMPDGKLILNVPWIEEAGGISNVAFLF
cccccccccccccccccccccccEEECccEEEEccEEEcccccccEEEccccccccccccccHHHHHcccccccEEEEECcccccccccccccccccccEEEEEccccccccccccccccccccccEEEEEEcccccEEEEEEEEEEcccEEEEcccccccEEEEEEccccccccccccEEEEEECcccHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHcccccHHHHHHHHHHHHHccccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccEEEHHHHHccccccccccccccccccccccccccccccccccccEEEEcccCECcccccHHHHHHHHHHHHHHccccEEEEHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccEEEccccccccccccccccccEECccccccccccccccccHHHHHHHHHHHHcccHHccccccccccccccccccHHHHHHHHHcccccEEEEcccccccHHHHHHHcccccccccccccccccccccccccccccccEEEEEEcccccEEEEEEccccccccccHHcccccccccccEEEEECccccccccHHHHcccccccEEEEEEEEccEEEEEccccccEEEEEccccEEEEEEEEEEECcccCEEEEccccccccccccEEEEEEccccccEEEEEEEEccEEEEEEEcccccEEEEccEEEEEEEccccEEEEEEccccccccCEEEEEEc
**********************HIGLSNGKLCVKGFPVLSDVPSNVSFTPFSL*********VIQAVQANSHKGGFLGFKAQEPSDRLMNSLGRFSGRDFVSIFRFKTWWSTQWVGNSGSDLQMETQWVLLDVPETTSYVMIIPIIESSFRSALHPGTDDHVMICAESGSTRLKASSFDAIAYVHVSDNPYNIMKEACSALRVHLNTFRLLEEKQVPSLVDKFGWCTWDAFYLTVEPAGVWQGVKDFVDGGISPRFLIIDDGWQSINRDDENPNEDSKNLVLGGEQMTARLHRLDESEKFR***************DIKRPKMLINKAIELEHANKARDKAIRSGVTDLFEFDSKINNLKKELEEMFGGEE************SC*ADNYGMKAFTRDLRTRFKGLDDIWVWHALCGAWGGVRPGTTHLNSKIIPCNLSPGLDGTMDDLAVVKIVEGGIGLVHPSQADDFYDSMYSYLAQAGITGVKVDVIHTLEYVSEEYGGRVELGKAYYKGLSNSLKKNFKGTGLISSMQQCNDFFFLGTRQISMGRVGDDFWFQDPNGDPNGVYWLQGVHMIHCSYNSLWMGQFIQPDWDMFQSDHCCAKFHAGSRAICGGPVYVSDSVGGHDFDLLKQLVYPDGTIPRCQHFALPTRDCLFRNPLFDKKTILKIWNFNKYGGVIGAFNCQGSGWDMKERRIKGYAECYKPVSGTVHVTDIEWDQNAEAAHLGEAEEYIVYLSQADKIHLVTPKSEAIKITLQPSSFELFNFVPIKKVGPDIKFAPVGITDMFNNGGTIREWAHSESGPEIRVKVEVKGGGNFLAYSTGSPKKCYLNGAEVAFEWMPDGKLILNVPWIEEAGGISNVAFLF
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MAPPNDPANALLTKLAPNRPGKHIGLSNGKLCVKGFPVLSDVPSNVSFTPFSLSKSSDAPLPVIQAVQANSHKGGFLGFKAQEPSDRLMNSLGRFSGRDFVSIFRFKTWWSTQWVGNSGSDLQMETQWVLLDVPETTSYVMIIPIIESSFRSALHPGTDDHVMICAESGSTRLKASSFDAIAYVHVSDNPYNIMKEACSALRVHLNTFRLLEEKQVPSLVDKFGWCTWDAFYLTVEPAGVWQGVKDFVDGGISPRFLIIDDGWQSINRDDENPNEDSKNLVLGGEQMTARLHRLDESEKFRKYKGGSLLAPNAPSFDIKRPKMLINKAIELEHANKARDKAIRSGVTDLFEFDSKINNLKKELEEMFGGEESGNSVNEGCGRCSCKADNYGMKAFTRDLRTRFKGLDDIWVWHALCGAWGGVRPGTTHLNSKIIPCNLSPGLDGTMDDLAVVKIVEGGIGLVHPSQADDFYDSMYSYLAQAGITGVKVDVIHTLEYVSEEYGGRVELGKAYYKGLSNSLKKNFKGTGLISSMQQCNDFFFLGTRQISMGRVGDDFWFQDPNGDPNGVYWLQGVHMIHCSYNSLWMGQFIQPDWDMFQSDHCCAKFHAGSRAICGGPVYVSDSVGGHDFDLLKQLVYPDGTIPRCQHFALPTRDCLFRNPLFDKKTILKIWNFNKYGGVIGAFNCQGSGWDMKERRIKGYAECYKPVSGTVHVTDIEWDQNAEAAHLGEAEEYIVYLSQADKIHLVTPKSEAIKITLQPSSFELFNFVPIKKVGPDIKFAPVGITDMFNNGGTIREWAHSESGPEIRVKVEVKGGGNFLAYSTGSPKKCYLNGAEVAFEWMPDGKLILNVPWIEEAGGISNVAFLF

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Probable galactinol--sucrose galactosyltransferase 4 Transglycosidase operating by a ping-pong reaction mechanism. Involved in the synthesis of raffinose, a major soluble carbohydrate in seeds, roots and tubers.probableQ9SYJ4
Stachyose synthase Catalyzes stachyose synthesis by transfer of a galactosyl moiety from galactinol to raffinose. Also catalyzes verbascose synthesis by galactosyl transfer from galactinol to stachyose or from one stachyose molecule to another. Oligosaccharides of the raffinose family play a protective role in maturation drying of seeds. They may act as cryoprotectants in frost-hardy plants.probableQ93XK2

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
2.-.-.-Transferases.probable
2.4.-.-Glycosyltransferases.probable
2.4.1.-Hexosyltransferases.probable
2.4.1.67Galactinol--raffinose galactosyltransferase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1ZY9, chain A
Confidence level:confident
Coverage over the Query: 139-268,293-297,318,386-644,657-686
View the alignment between query and template
View the model in PyMOL
Template: 3CC1, chain A
Confidence level:confident
Coverage over the Query: 224-274,286-297,318,386-433,445-558,569-687,705-717,730-769
View the alignment between query and template
View the model in PyMOL
Template: 3NSX, chain A
Confidence level:probable
Coverage over the Query: 76-253
View the alignment between query and template
View the model in PyMOL