Query 002926
Match_columns 864
No_of_seqs 342 out of 1727
Neff 4.3
Searched_HMMs 29240
Date Mon Mar 25 06:49:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002926.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002926hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ysm_A Myeloid/lymphoid or mix 99.8 1.7E-21 5.8E-26 179.8 7.7 105 141-253 4-108 (111)
2 2kwj_A Zinc finger protein DPF 99.8 5E-21 1.7E-25 178.3 3.4 103 145-247 2-106 (114)
3 3v43_A Histone acetyltransfera 99.8 2.5E-20 8.5E-25 173.0 6.2 106 142-247 3-110 (112)
4 2ysm_A Myeloid/lymphoid or mix 99.5 5.4E-14 1.8E-18 129.7 6.3 96 201-341 9-104 (111)
5 4gne_A Histone-lysine N-methyl 99.4 2.4E-13 8.1E-18 126.1 6.2 86 140-243 11-98 (107)
6 3v43_A Histone acetyltransfera 99.3 9.6E-13 3.3E-17 122.1 4.9 88 209-340 21-111 (112)
7 2kwj_A Zinc finger protein DPF 99.3 9.4E-13 3.2E-17 122.6 2.3 95 201-340 3-107 (114)
8 3asl_A E3 ubiquitin-protein li 99.2 1.4E-11 4.8E-16 106.1 5.3 55 192-247 12-67 (70)
9 2e6s_A E3 ubiquitin-protein li 99.1 3.2E-11 1.1E-15 105.8 5.7 55 192-247 20-75 (77)
10 3shb_A E3 ubiquitin-protein li 99.1 2.7E-11 9.2E-16 106.3 5.2 55 192-247 20-75 (77)
11 2e6r_A Jumonji/ARID domain-con 99.0 9.5E-11 3.3E-15 105.8 3.2 58 191-248 8-65 (92)
12 1f62_A Transcription factor WS 99.0 3E-10 1E-14 91.4 3.5 47 201-247 2-48 (51)
13 3ask_A E3 ubiquitin-protein li 98.9 5.2E-10 1.8E-14 115.6 4.8 55 192-247 168-223 (226)
14 4gne_A Histone-lysine N-methyl 98.9 1.5E-09 5.2E-14 100.7 7.0 67 201-316 17-85 (107)
15 1fp0_A KAP-1 corepressor; PHD 98.8 3E-09 1E-13 95.7 6.5 57 190-249 16-72 (88)
16 3lqh_A Histone-lysine N-methyl 98.8 1.3E-09 4.5E-14 109.5 3.3 63 281-343 1-65 (183)
17 1mm2_A MI2-beta; PHD, zinc fin 98.8 4.2E-09 1.4E-13 88.3 4.2 44 201-247 11-54 (61)
18 2lri_C Autoimmune regulator; Z 98.7 3.5E-09 1.2E-13 90.4 3.0 44 201-247 14-57 (66)
19 2l5u_A Chromodomain-helicase-D 98.7 6.4E-09 2.2E-13 87.1 4.0 46 199-247 11-56 (61)
20 2yql_A PHD finger protein 21A; 98.7 4E-09 1.4E-13 86.7 2.4 44 201-247 11-54 (56)
21 1fp0_A KAP-1 corepressor; PHD 98.7 1.5E-08 5.1E-13 91.2 6.0 61 135-206 16-76 (88)
22 1xwh_A Autoimmune regulator; P 98.7 4.4E-09 1.5E-13 89.2 2.4 44 201-247 10-53 (66)
23 4bbq_A Lysine-specific demethy 98.7 5.9E-09 2E-13 96.6 3.4 109 198-342 6-115 (117)
24 2puy_A PHD finger protein 21A; 98.7 4.6E-09 1.6E-13 87.4 2.4 44 201-247 7-50 (60)
25 1mm2_A MI2-beta; PHD, zinc fin 98.6 2.2E-08 7.6E-13 83.8 4.1 47 142-199 7-53 (61)
26 2lri_C Autoimmune regulator; Z 98.6 2.2E-08 7.4E-13 85.5 3.7 49 141-200 9-57 (66)
27 1xwh_A Autoimmune regulator; P 98.6 1.4E-08 4.9E-13 86.1 2.3 48 141-199 5-52 (66)
28 1wev_A Riken cDNA 1110020M19; 98.6 1.4E-08 4.9E-13 90.8 2.2 48 201-248 18-71 (88)
29 2l5u_A Chromodomain-helicase-D 98.6 3E-08 1E-12 83.1 3.5 49 141-200 8-56 (61)
30 2yt5_A Metal-response element- 98.5 1.5E-08 5E-13 85.4 1.4 48 201-248 8-60 (66)
31 2puy_A PHD finger protein 21A; 98.5 2.3E-08 7.9E-13 83.2 2.2 47 142-199 3-49 (60)
32 2yql_A PHD finger protein 21A; 98.5 2.5E-08 8.6E-13 81.9 2.3 48 141-199 6-53 (56)
33 2k16_A Transcription initiatio 98.5 3.8E-08 1.3E-12 84.9 3.2 47 201-247 20-66 (75)
34 1wev_A Riken cDNA 1110020M19; 98.5 2.5E-08 8.6E-13 89.3 1.5 56 142-200 14-70 (88)
35 2vpb_A Hpygo1, pygopus homolog 98.5 1.7E-08 5.7E-13 86.0 0.1 54 284-339 10-64 (65)
36 3o36_A Transcription intermedi 98.5 6.5E-08 2.2E-12 96.2 4.2 45 201-248 6-50 (184)
37 1f62_A Transcription factor WS 98.5 6E-08 2.1E-12 77.9 3.1 47 146-200 2-48 (51)
38 2ku3_A Bromodomain-containing 98.5 2.9E-08 1E-12 85.8 1.3 45 201-247 18-64 (71)
39 3u5n_A E3 ubiquitin-protein li 98.5 6.7E-08 2.3E-12 98.0 3.8 46 201-249 9-54 (207)
40 2l43_A N-teminal domain from h 98.5 3E-08 1E-12 88.8 1.0 45 201-247 27-73 (88)
41 2yt5_A Metal-response element- 98.4 3.5E-08 1.2E-12 83.1 1.2 57 141-200 3-59 (66)
42 2ku3_A Bromodomain-containing 98.4 5.2E-08 1.8E-12 84.3 2.1 52 140-199 12-63 (71)
43 3o36_A Transcription intermedi 98.4 9.6E-08 3.3E-12 95.0 4.0 48 142-200 2-49 (184)
44 1we9_A PHD finger family prote 98.4 5.4E-08 1.8E-12 81.6 1.7 54 281-341 5-58 (64)
45 2ro1_A Transcription intermedi 98.4 1.2E-07 4.2E-12 95.3 4.1 45 201-248 4-48 (189)
46 2l43_A N-teminal domain from h 98.4 7.8E-08 2.7E-12 86.2 2.3 52 140-199 21-72 (88)
47 2xb1_A Pygopus homolog 2, B-ce 98.4 6.2E-08 2.1E-12 89.4 1.4 56 284-341 5-61 (105)
48 2e6r_A Jumonji/ARID domain-con 98.4 1.3E-07 4.4E-12 85.4 3.1 59 141-208 13-71 (92)
49 3u5n_A E3 ubiquitin-protein li 98.3 1.8E-07 6.3E-12 94.8 3.9 48 142-200 5-52 (207)
50 2e6s_A E3 ubiquitin-protein li 98.3 5.2E-07 1.8E-11 79.2 4.2 50 143-200 25-75 (77)
51 2lv9_A Histone-lysine N-methyl 98.2 5.3E-07 1.8E-11 82.1 4.1 43 204-247 32-74 (98)
52 2ro1_A Transcription intermedi 98.2 3.9E-07 1.3E-11 91.6 3.5 45 144-199 2-46 (189)
53 1wep_A PHF8; structural genomi 98.2 4.7E-07 1.6E-11 79.2 3.2 52 282-341 12-63 (79)
54 3asl_A E3 ubiquitin-protein li 98.2 6.5E-07 2.2E-11 77.0 3.9 47 146-200 20-67 (70)
55 2kgg_A Histone demethylase jar 98.2 1.2E-06 4.1E-11 71.1 4.3 47 285-339 5-52 (52)
56 2lbm_A Transcriptional regulat 98.1 2.6E-07 8.9E-12 89.7 -0.3 44 201-247 65-115 (142)
57 2lbm_A Transcriptional regulat 98.1 7.3E-07 2.5E-11 86.6 1.3 52 141-200 60-115 (142)
58 3shb_A E3 ubiquitin-protein li 98.1 1.8E-06 6.1E-11 75.8 3.6 47 146-200 28-75 (77)
59 1wem_A Death associated transc 98.1 3.9E-07 1.3E-11 78.9 -0.6 54 283-341 17-70 (76)
60 2k16_A Transcription initiatio 98.1 1.9E-06 6.4E-11 74.3 3.6 51 142-200 16-66 (75)
61 1weu_A Inhibitor of growth fam 98.0 4.9E-06 1.7E-10 75.3 5.0 48 282-342 36-86 (91)
62 1wen_A Inhibitor of growth fam 98.0 4.1E-06 1.4E-10 72.4 3.9 43 201-247 18-63 (71)
63 3ask_A E3 ubiquitin-protein li 98.0 2.6E-06 9E-11 88.2 3.0 49 144-200 174-223 (226)
64 4bbq_A Lysine-specific demethy 98.0 2.4E-06 8.4E-11 79.0 2.4 81 167-247 18-112 (117)
65 3o70_A PHD finger protein 13; 97.9 1.3E-06 4.3E-11 74.9 0.1 47 283-340 20-66 (68)
66 1wee_A PHD finger family prote 97.9 2.4E-06 8.1E-11 73.5 1.3 49 283-340 17-65 (72)
67 1weu_A Inhibitor of growth fam 97.9 6.1E-06 2.1E-10 74.7 3.9 43 201-247 38-83 (91)
68 1wen_A Inhibitor of growth fam 97.9 1.1E-05 3.7E-10 69.7 4.9 47 141-199 13-62 (71)
69 2vnf_A ING 4, P29ING4, inhibit 97.9 3.6E-06 1.2E-10 70.4 1.5 43 201-247 12-57 (60)
70 2ri7_A Nucleosome-remodeling f 97.8 2.1E-06 7.2E-11 84.3 -0.1 51 282-340 8-58 (174)
71 3c6w_A P28ING5, inhibitor of g 97.8 4.6E-06 1.6E-10 69.6 1.5 43 201-247 11-56 (59)
72 3kqi_A GRC5, PHD finger protei 97.8 2.6E-06 8.8E-11 73.9 -0.5 50 283-340 11-60 (75)
73 2jmi_A Protein YNG1, ING1 homo 97.8 7.8E-06 2.7E-10 73.8 2.4 43 201-247 28-74 (90)
74 3o70_A PHD finger protein 13; 97.8 8E-06 2.8E-10 69.9 2.3 45 201-247 21-65 (68)
75 2g6q_A Inhibitor of growth pro 97.7 7.2E-06 2.5E-10 69.1 1.4 43 201-247 13-58 (62)
76 2lv9_A Histone-lysine N-methyl 97.7 2.7E-05 9.4E-10 70.8 4.7 45 146-200 30-74 (98)
77 3o7a_A PHD finger protein 13 v 97.7 6.4E-06 2.2E-10 66.7 0.3 46 284-340 6-51 (52)
78 1wee_A PHD finger family prote 97.6 1.7E-05 5.8E-10 68.2 2.4 46 201-247 18-64 (72)
79 1we9_A PHD finger family prote 97.6 1.3E-05 4.4E-10 67.1 1.6 47 201-247 8-56 (64)
80 3ql9_A Transcriptional regulat 97.6 1.5E-05 5E-10 76.4 1.0 52 141-200 54-109 (129)
81 3c6w_A P28ING5, inhibitor of g 97.5 2.1E-05 7.3E-10 65.6 1.6 45 143-199 8-55 (59)
82 2g6q_A Inhibitor of growth pro 97.5 2.2E-05 7.7E-10 66.1 1.6 45 143-199 10-57 (62)
83 2vnf_A ING 4, P29ING4, inhibit 97.5 2.3E-05 7.7E-10 65.5 1.6 45 143-199 9-56 (60)
84 3ql9_A Transcriptional regulat 97.5 8.2E-06 2.8E-10 78.1 -1.5 44 201-247 59-109 (129)
85 1x4i_A Inhibitor of growth pro 97.5 2E-05 6.8E-10 67.9 0.9 43 201-247 8-53 (70)
86 2kgg_A Histone demethylase jar 97.5 2.5E-05 8.4E-10 63.4 1.0 47 201-247 4-52 (52)
87 2jmi_A Protein YNG1, ING1 homo 97.4 4.8E-05 1.6E-09 68.7 2.5 45 143-199 25-73 (90)
88 1wep_A PHF8; structural genomi 97.4 2.9E-05 9.9E-10 67.8 0.9 47 201-248 14-62 (79)
89 1wem_A Death associated transc 97.4 1.3E-05 4.5E-10 69.4 -1.3 46 201-247 18-68 (76)
90 3o7a_A PHD finger protein 13 v 97.4 6.2E-05 2.1E-09 60.9 2.4 43 204-247 8-50 (52)
91 3kqi_A GRC5, PHD finger protei 97.3 3.2E-05 1.1E-09 67.0 -0.1 47 201-248 12-60 (75)
92 1wew_A DNA-binding family prot 97.3 6.2E-05 2.1E-09 65.7 1.4 46 201-247 18-70 (78)
93 2xb1_A Pygopus homolog 2, B-ce 97.2 5.4E-05 1.9E-09 69.8 0.6 48 201-248 5-60 (105)
94 2vpb_A Hpygo1, pygopus homolog 97.2 2.4E-05 8.1E-10 66.6 -1.8 47 201-247 10-64 (65)
95 3kv5_D JMJC domain-containing 97.2 4.1E-05 1.4E-09 87.2 -0.6 50 283-340 38-87 (488)
96 2ri7_A Nucleosome-remodeling f 97.2 3.4E-05 1.2E-09 75.7 -1.4 46 201-247 10-57 (174)
97 2rsd_A E3 SUMO-protein ligase 97.2 0.00013 4.3E-09 62.2 2.3 44 204-247 14-63 (68)
98 1x4i_A Inhibitor of growth pro 97.2 5.7E-05 2E-09 65.1 0.2 45 283-340 7-54 (70)
99 3kv4_A PHD finger protein 8; e 97.2 5.1E-05 1.7E-09 85.6 -0.6 49 284-340 7-55 (447)
100 2ku7_A MLL1 PHD3-CYP33 RRM chi 97.1 0.0002 7E-09 65.9 2.5 42 299-340 1-43 (140)
101 1wil_A KIAA1045 protein; ring 97.0 0.00033 1.1E-08 62.6 3.2 54 140-199 11-73 (89)
102 2rsd_A E3 SUMO-protein ligase 96.9 0.00036 1.2E-08 59.4 2.7 53 142-200 8-63 (68)
103 3pur_A Lysine-specific demethy 96.9 0.00043 1.5E-08 79.2 4.0 42 294-340 52-93 (528)
104 1wew_A DNA-binding family prot 96.9 0.00045 1.6E-08 60.2 2.8 54 141-200 13-70 (78)
105 3lqh_A Histone-lysine N-methyl 96.7 0.00026 8.7E-09 71.3 0.2 47 201-247 4-61 (183)
106 3rsn_A SET1/ASH2 histone methy 96.5 0.0011 3.8E-08 66.5 2.7 48 293-342 13-60 (177)
107 2equ_A PHD finger protein 20-l 96.1 0.01 3.6E-07 51.7 6.5 56 802-862 10-66 (74)
108 3kv5_D JMJC domain-containing 96.0 0.0007 2.4E-08 77.1 -1.4 47 201-248 39-87 (488)
109 1wil_A KIAA1045 protein; ring 96.0 0.0015 5.2E-08 58.4 0.8 46 201-247 17-74 (89)
110 3kv4_A PHD finger protein 8; e 95.8 0.00077 2.6E-08 76.1 -2.3 44 204-247 9-54 (447)
111 3qii_A PHD finger protein 20; 95.6 0.016 5.4E-07 52.0 5.8 58 798-859 18-75 (85)
112 2g3r_A Tumor suppressor P53-bi 95.5 0.012 4.2E-07 55.6 4.9 46 800-846 3-48 (123)
113 3pur_A Lysine-specific demethy 95.3 0.0066 2.3E-07 69.7 3.0 37 162-200 56-92 (528)
114 2ldm_A Uncharacterized protein 94.1 0.0036 1.2E-07 55.7 0.0 54 803-860 8-61 (81)
115 3rsn_A SET1/ASH2 histone methy 95.1 0.012 4.3E-07 59.0 3.8 32 201-233 7-39 (177)
116 1ssf_A Transformation related 94.9 0.021 7.1E-07 56.1 4.6 46 800-846 7-52 (156)
117 3p8d_A Medulloblastoma antigen 94.9 0.04 1.4E-06 47.4 5.7 54 802-859 7-60 (67)
118 4ap4_A E3 ubiquitin ligase RNF 92.9 0.0049 1.7E-07 56.2 -3.9 92 144-247 7-120 (133)
119 3h8z_A FragIle X mental retard 92.5 0.16 5.6E-06 48.5 5.9 52 805-859 5-56 (128)
120 2ku7_A MLL1 PHD3-CYP33 RRM chi 92.5 0.03 1E-06 51.3 0.8 35 213-247 1-42 (140)
121 4ap4_A E3 ubiquitin ligase RNF 92.4 0.017 5.8E-07 52.6 -1.0 96 214-341 26-122 (133)
122 2pv0_B DNA (cytosine-5)-methyl 92.2 0.022 7.6E-07 63.2 -0.6 91 143-248 49-147 (386)
123 2ecl_A Ring-box protein 2; RNF 89.8 0.21 7.3E-06 43.0 3.4 68 260-341 6-73 (81)
124 3a1b_A DNA (cytosine-5)-methyl 89.3 0.076 2.6E-06 52.5 0.2 90 143-247 35-132 (159)
125 1mhn_A SurviVal motor neuron p 89.0 0.66 2.2E-05 38.1 5.7 52 803-856 5-57 (59)
126 2d9t_A Tudor domain-containing 88.1 0.96 3.3E-05 39.3 6.4 55 803-859 11-66 (78)
127 3a1b_A DNA (cytosine-5)-methyl 86.6 0.16 5.6E-06 50.2 0.7 50 142-199 77-131 (159)
128 3pnw_C Tudor domain-containing 86.5 1.2 4.1E-05 38.8 6.0 67 789-857 5-72 (77)
129 3s6w_A Tudor domain-containing 86.4 1.2 3.9E-05 35.9 5.5 45 804-848 4-49 (54)
130 4a4f_A SurviVal of motor neuro 85.9 1.2 4E-05 37.3 5.5 46 803-848 10-56 (64)
131 1g5v_A SurviVal motor neuron p 84.0 1.5 5.2E-05 39.3 5.6 54 802-857 11-65 (88)
132 2d8s_A Cellular modulator of i 83.9 0.37 1.3E-05 42.1 1.6 49 142-199 13-64 (80)
133 1iym_A EL5; ring-H2 finger, ub 83.4 0.68 2.3E-05 36.1 2.8 46 144-200 5-50 (55)
134 2pv0_B DNA (cytosine-5)-methyl 81.8 0.32 1.1E-05 54.1 0.4 52 141-200 90-146 (386)
135 2lcd_A AT-rich interactive dom 82.4 0.29 9.9E-06 46.1 0.0 46 799-846 54-99 (118)
136 2ct0_A Non-SMC element 1 homol 81.3 0.89 3.1E-05 39.4 3.0 36 143-185 14-49 (74)
137 2ect_A Ring finger protein 126 80.7 1.1 3.8E-05 37.5 3.4 38 142-184 13-50 (78)
138 1x4j_A Ring finger protein 38; 80.1 0.47 1.6E-05 39.7 0.8 37 143-184 22-58 (75)
139 2kiz_A E3 ubiquitin-protein li 80.1 0.59 2E-05 38.3 1.4 38 142-184 12-49 (69)
140 2wac_A CG7008-PA; unknown func 78.5 3.3 0.00011 40.9 6.5 51 803-857 53-104 (218)
141 1v87_A Deltex protein 2; ring- 78.3 0.86 2.9E-05 40.9 2.0 55 144-200 25-89 (114)
142 1rut_X Flinc4, fusion protein 77.8 0.52 1.8E-05 46.5 0.4 28 267-294 53-81 (188)
143 1iym_A EL5; ring-H2 finger, ub 77.6 1.1 3.8E-05 34.9 2.2 48 282-341 5-52 (55)
144 2xjy_A Rhombotin-2; oncoprotei 77.0 1.4 4.6E-05 40.6 3.0 50 245-294 28-78 (131)
145 2ecm_A Ring finger and CHY zin 75.3 0.97 3.3E-05 35.1 1.3 45 144-199 5-49 (55)
146 2rgt_A Fusion of LIM/homeobox 75.1 2.3 7.9E-05 41.1 4.2 61 246-314 33-93 (169)
147 2l0b_A E3 ubiquitin-protein li 74.7 1 3.5E-05 39.4 1.4 37 143-184 39-75 (91)
148 3dpl_R Ring-box protein 1; ubi 73.8 0.96 3.3E-05 41.4 1.1 42 143-184 36-87 (106)
149 2ect_A Ring finger protein 126 73.5 1.7 5.8E-05 36.3 2.5 47 283-342 16-62 (78)
150 1v87_A Deltex protein 2; ring- 72.8 2.2 7.5E-05 38.2 3.2 54 283-341 26-91 (114)
151 2jtn_A LIM domain-binding prot 72.1 2.6 9E-05 41.2 3.8 40 249-292 90-129 (182)
152 2ct2_A Tripartite motif protei 71.7 1.8 6.2E-05 36.7 2.2 50 283-341 16-65 (88)
153 2ep4_A Ring finger protein 24; 71.1 1.5 5E-05 36.4 1.5 50 283-345 16-65 (74)
154 3k1l_B Fancl; UBC, ring, RWD, 71.0 1.5 5.3E-05 48.4 2.0 55 284-341 310-370 (381)
155 3h8z_A FragIle X mental retard 70.9 7.1 0.00024 37.3 6.3 53 803-859 62-121 (128)
156 1vyx_A ORF K3, K3RING; zinc-bi 70.3 0.84 2.9E-05 37.7 -0.2 47 143-199 5-53 (60)
157 2ecm_A Ring finger and CHY zin 70.2 3.4 0.00012 32.0 3.3 47 283-341 6-52 (55)
158 2ep4_A Ring finger protein 24; 69.7 1.5 5.1E-05 36.3 1.2 37 143-184 14-50 (74)
159 2yur_A Retinoblastoma-binding 69.6 2.5 8.6E-05 35.3 2.6 47 141-199 12-58 (74)
160 2xdp_A Lysine-specific demethy 68.1 7.7 0.00026 36.9 5.8 54 789-846 54-107 (123)
161 3dpl_R Ring-box protein 1; ubi 67.7 2.6 8.8E-05 38.6 2.5 68 262-341 30-98 (106)
162 3pfq_A PKC-B, PKC-beta, protei 67.5 2.4 8.2E-05 49.4 2.8 84 144-230 48-146 (674)
163 2ecl_A Ring-box protein 2; RNF 67.3 1.6 5.6E-05 37.4 1.0 42 143-184 14-62 (81)
164 1x4j_A Ring finger protein 38; 66.5 2.3 7.8E-05 35.4 1.7 48 282-342 23-70 (75)
165 2xk0_A Polycomb protein PCL; t 65.9 10 0.00036 32.8 5.6 44 801-847 15-58 (69)
166 1chc_A Equine herpes virus-1 r 65.8 1.5 5.2E-05 35.6 0.5 35 143-184 4-38 (68)
167 3lrq_A E3 ubiquitin-protein li 65.7 1.6 5.4E-05 38.8 0.6 34 144-184 22-55 (100)
168 2djb_A Polycomb group ring fin 65.4 2.8 9.7E-05 34.6 2.1 36 142-184 13-48 (72)
169 2egp_A Tripartite motif-contai 65.4 5.2 0.00018 33.2 3.7 49 143-199 11-59 (79)
170 2ysl_A Tripartite motif-contai 64.7 4.7 0.00016 33.0 3.3 46 142-199 18-63 (73)
171 2kiz_A E3 ubiquitin-protein li 64.7 3.5 0.00012 33.6 2.5 47 283-342 15-61 (69)
172 2d8t_A Dactylidin, ring finger 64.6 3.3 0.00011 34.1 2.4 35 142-184 13-47 (71)
173 2d8s_A Cellular modulator of i 64.2 2.8 9.5E-05 36.5 1.9 49 283-341 16-67 (80)
174 2ea6_A Ring finger protein 4; 62.2 2.1 7.1E-05 34.5 0.6 42 142-184 13-54 (69)
175 2ckl_B Ubiquitin ligase protei 61.5 2.4 8.2E-05 40.7 1.0 35 143-184 53-87 (165)
176 2ecw_A Tripartite motif-contai 61.3 4.9 0.00017 33.5 2.8 49 142-199 17-65 (85)
177 4a0k_B E3 ubiquitin-protein li 59.3 2 6.9E-05 40.2 0.1 17 168-184 82-98 (117)
178 1b8t_A Protein (CRP1); LIM dom 58.8 4.2 0.00015 40.0 2.4 37 164-209 7-44 (192)
179 2ysj_A Tripartite motif-contai 56.9 5.7 0.00019 31.8 2.4 46 142-199 18-63 (63)
180 2jrp_A Putative cytoplasmic pr 56.8 5 0.00017 35.7 2.2 27 264-290 13-39 (81)
181 2ckl_A Polycomb group ring fin 56.8 12 0.00039 33.3 4.6 46 283-343 16-61 (108)
182 2ct2_A Tripartite motif protei 56.7 4.6 0.00016 34.1 1.9 49 143-199 14-62 (88)
183 2ea6_A Ring finger protein 4; 56.3 4.7 0.00016 32.4 1.8 49 283-341 16-65 (69)
184 2jtn_A LIM domain-binding prot 56.2 7.4 0.00025 38.0 3.5 15 241-255 142-156 (182)
185 2cup_A Skeletal muscle LIM-pro 55.4 16 0.00056 31.7 5.3 44 246-292 33-76 (101)
186 3pfq_A PKC-B, PKC-beta, protei 54.9 6.3 0.00022 45.9 3.3 30 201-230 50-81 (674)
187 2ecj_A Tripartite motif-contai 54.3 7 0.00024 30.4 2.5 45 143-199 14-58 (58)
188 2hqx_A P100 CO-activator tudor 53.8 15 0.00052 37.3 5.5 51 803-857 67-118 (246)
189 3ng2_A RNF4, snurf, ring finge 52.7 2.4 8.1E-05 34.5 -0.6 41 143-184 9-49 (71)
190 3fdr_A Tudor and KH domain-con 52.7 19 0.00064 31.6 5.2 52 803-857 29-81 (94)
191 3ng2_A RNF4, snurf, ring finge 52.7 4.3 0.00015 32.9 1.1 49 283-341 11-60 (71)
192 2csy_A Zinc finger protein 183 52.5 5.4 0.00019 33.6 1.7 34 143-184 14-47 (81)
193 2rgt_A Fusion of LIM/homeobox 52.3 4.2 0.00014 39.3 1.0 8 145-152 7-14 (169)
194 2ckl_B Ubiquitin ligase protei 52.3 9.6 0.00033 36.4 3.6 45 284-342 56-100 (165)
195 2ecv_A Tripartite motif-contai 52.1 4 0.00014 34.0 0.8 50 283-342 20-69 (85)
196 2m0o_A PHD finger protein 1; t 52.1 14 0.00047 32.7 4.1 41 801-842 26-66 (79)
197 2ct0_A Non-SMC element 1 homol 52.0 4.5 0.00015 35.0 1.1 43 201-247 17-59 (74)
198 2ecy_A TNF receptor-associated 51.9 6.2 0.00021 31.9 1.9 34 143-184 14-47 (66)
199 3ztg_A E3 ubiquitin-protein li 51.3 15 0.00051 31.4 4.3 46 284-342 15-60 (92)
200 3l11_A E3 ubiquitin-protein li 50.7 8.3 0.00029 34.6 2.7 44 142-199 13-56 (115)
201 3nw0_A Non-structural maintena 50.5 5.3 0.00018 41.5 1.5 44 144-199 180-223 (238)
202 2ecv_A Tripartite motif-contai 49.4 6.7 0.00023 32.6 1.8 49 142-199 17-65 (85)
203 4a0k_B E3 ubiquitin-protein li 49.4 4 0.00014 38.2 0.4 68 262-341 41-109 (117)
204 1weq_A PHD finger protein 7; s 49.3 11 0.00037 33.8 3.1 35 160-200 42-77 (85)
205 3dlm_A Histone-lysine N-methyl 49.1 24 0.00081 36.5 6.0 46 800-846 7-54 (213)
206 3k1l_B Fancl; UBC, ring, RWD, 48.8 5.7 0.00019 44.0 1.5 40 143-184 307-348 (381)
207 4hcz_A PHD finger protein 1; p 48.6 31 0.0011 28.9 5.5 42 804-846 6-47 (58)
208 2y43_A E3 ubiquitin-protein li 48.5 5.6 0.00019 34.8 1.2 35 143-184 21-55 (99)
209 2qqr_A JMJC domain-containing 48.2 25 0.00087 33.2 5.6 54 789-846 53-106 (118)
210 3lrq_A E3 ubiquitin-protein li 47.3 7.7 0.00026 34.3 1.9 45 284-342 24-68 (100)
211 2ckl_A Polycomb group ring fin 46.7 6.7 0.00023 34.9 1.4 35 143-184 14-48 (108)
212 2l0b_A E3 ubiquitin-protein li 46.2 3 0.0001 36.3 -1.0 43 201-247 42-84 (91)
213 2co8_A NEDD9 interacting prote 45.9 18 0.00061 30.8 3.9 9 221-229 35-43 (82)
214 2xqn_T Testin, TESS; metal-bin 45.8 13 0.00043 33.9 3.1 43 249-294 33-75 (126)
215 3nw0_A Non-structural maintena 45.2 6.9 0.00023 40.6 1.4 43 201-247 182-224 (238)
216 2yur_A Retinoblastoma-binding 45.2 19 0.00066 29.8 3.9 47 283-342 16-62 (74)
217 4ayc_A E3 ubiquitin-protein li 44.2 5.9 0.0002 37.0 0.7 32 145-184 54-85 (138)
218 2xeu_A Ring finger protein 4; 43.8 5.1 0.00017 31.7 0.1 48 284-341 5-53 (64)
219 4b9w_A TDRD1, tudor domain-con 43.6 34 0.0012 33.9 6.1 53 803-858 67-120 (201)
220 2ecn_A Ring finger protein 141 43.6 4.8 0.00016 32.8 -0.1 33 143-184 14-46 (70)
221 2e5p_A Protein PHF1, PHD finge 43.4 33 0.0011 29.6 5.0 40 803-843 11-50 (68)
222 2ecw_A Tripartite motif-contai 42.6 9.8 0.00033 31.6 1.7 49 283-341 20-68 (85)
223 2djb_A Polycomb group ring fin 42.3 13 0.00045 30.6 2.4 45 283-342 16-60 (72)
224 1e4u_A Transcriptional repress 40.8 7.4 0.00025 33.5 0.7 49 283-342 12-60 (78)
225 2diq_A Tudor and KH domain-con 40.5 22 0.00074 32.1 3.8 51 803-857 34-86 (110)
226 1jm7_A BRCA1, breast cancer ty 40.0 16 0.00054 32.2 2.7 45 284-341 23-67 (112)
227 1y96_A Gemin6, SIP2, GEM-assoc 40.0 48 0.0016 29.7 5.8 34 802-836 14-48 (86)
228 2lq6_A Bromodomain-containing 39.7 14 0.00047 32.8 2.3 36 190-230 12-49 (87)
229 3fl2_A E3 ubiquitin-protein li 39.3 8.1 0.00028 35.2 0.7 42 144-199 52-93 (124)
230 3ztg_A E3 ubiquitin-protein li 39.1 12 0.00042 32.0 1.8 45 143-199 12-56 (92)
231 1jm7_A BRCA1, breast cancer ty 38.7 8.2 0.00028 34.1 0.7 44 144-199 21-64 (112)
232 4b9x_A TDRD1, tudor domain-con 36.1 44 0.0015 33.7 5.7 52 803-857 67-119 (226)
233 3ntk_A Maternal protein tudor; 35.9 42 0.0014 32.4 5.3 52 801-857 47-99 (169)
234 2eqj_A Metal-response element- 35.6 52 0.0018 28.3 5.0 40 803-843 15-54 (66)
235 1t1h_A Gspef-atpub14, armadill 35.1 11 0.00039 31.2 0.9 43 143-199 7-49 (78)
236 2y43_A E3 ubiquitin-protein li 34.8 17 0.00057 31.7 2.0 45 283-342 23-67 (99)
237 2dlq_A GLI-kruppel family memb 34.0 29 0.001 29.9 3.5 44 297-344 63-106 (124)
238 1ib8_A Conserved protein SP14. 34.0 50 0.0017 32.3 5.5 36 802-839 101-139 (164)
239 2e5q_A PHD finger protein 19; 33.6 45 0.0015 28.4 4.2 40 803-843 9-48 (63)
240 1weo_A Cellulose synthase, cat 33.6 20 0.0007 32.5 2.3 54 140-200 12-65 (93)
241 2egp_A Tripartite motif-contai 33.5 20 0.0007 29.4 2.3 29 219-247 29-60 (79)
242 2ecj_A Tripartite motif-contai 32.2 15 0.00052 28.4 1.2 27 219-246 32-58 (58)
243 2lq6_A Bromodomain-containing 32.1 19 0.00066 31.9 2.0 32 144-181 17-50 (87)
244 2dxu_A Biotin--[acetyl-COA-car 31.8 37 0.0013 34.8 4.3 45 804-853 188-233 (235)
245 2ysl_A Tripartite motif-contai 31.8 11 0.00037 30.8 0.2 28 219-247 37-64 (73)
246 1m3v_A FLIN4, fusion of the LI 31.4 12 0.00041 34.2 0.5 45 249-293 35-80 (122)
247 2ysj_A Tripartite motif-contai 30.2 7.5 0.00026 31.0 -0.9 27 219-246 37-63 (63)
248 2ee8_A Protein ODD-skipped-rel 29.8 40 0.0014 28.4 3.6 42 299-344 44-85 (106)
249 1jm7_B BARD1, BRCA1-associated 29.7 27 0.00093 31.5 2.6 33 144-183 22-54 (117)
250 2qqr_A JMJC domain-containing 29.7 67 0.0023 30.3 5.3 38 803-842 7-44 (118)
251 3l11_A E3 ubiquitin-protein li 29.6 24 0.00082 31.5 2.2 26 219-247 32-57 (115)
252 1z6u_A NP95-like ring finger p 29.5 15 0.00051 35.2 0.8 43 143-199 77-119 (150)
253 1faq_A RAF-1; transferase, ser 28.9 29 0.00099 27.1 2.3 29 284-317 16-44 (52)
254 3gj8_B Nuclear pore complex pr 28.5 22 0.00076 31.7 1.7 18 191-208 6-31 (92)
255 2lk0_A RNA-binding protein 5; 28.1 21 0.00073 26.1 1.3 19 191-209 3-29 (32)
256 4a53_A EDC3; RNA binding prote 27.6 45 0.0015 31.8 3.7 31 802-833 9-39 (125)
257 2k1p_A Zinc finger RAN-binding 27.5 35 0.0012 25.1 2.4 18 191-208 4-29 (33)
258 2ehe_A Four and A half LIM dom 27.5 78 0.0027 26.4 4.9 13 244-256 41-53 (82)
259 2d8t_A Dactylidin, ring finger 26.9 16 0.00055 29.9 0.5 25 219-247 32-56 (71)
260 2jne_A Hypothetical protein YF 26.5 22 0.00074 32.8 1.3 28 263-290 42-69 (101)
261 1g25_A CDK-activating kinase a 25.6 19 0.00063 28.9 0.6 36 144-183 3-39 (65)
262 2cuq_A Four and A half LIM dom 25.6 57 0.002 27.0 3.7 13 244-256 39-51 (80)
263 3bdl_A Staphylococcal nuclease 25.5 79 0.0027 36.3 6.0 51 803-857 413-464 (570)
264 2ecy_A TNF receptor-associated 25.2 12 0.00041 30.2 -0.6 27 218-247 31-57 (66)
265 2enz_A NPKC-theta, protein kin 25.0 54 0.0019 27.0 3.4 33 284-317 25-57 (65)
266 2l4z_A DNA endonuclease RBBP8, 24.4 30 0.001 32.0 1.8 28 201-230 63-90 (123)
267 2d8y_A Eplin protein; LIM doma 24.1 41 0.0014 28.9 2.6 28 201-230 17-44 (91)
268 2vc8_A Enhancer of mRNA-decapp 24.0 1E+02 0.0034 27.7 5.0 47 789-844 2-50 (84)
269 1x63_A Skeletal muscle LIM-pro 24.0 51 0.0018 27.5 3.1 13 244-256 41-53 (82)
270 2cu8_A Cysteine-rich protein 2 24.0 48 0.0017 27.3 2.9 28 201-230 11-38 (76)
271 2yt9_A Zinc finger-containing 23.9 66 0.0022 26.4 3.8 44 298-344 33-77 (95)
272 3fl2_A E3 ubiquitin-protein li 23.5 12 0.00042 34.0 -0.9 26 219-247 69-94 (124)
273 2dmd_A Zinc finger protein 64, 23.2 60 0.0021 26.7 3.4 41 299-343 35-75 (96)
274 2dkt_A Ring finger and CHY zin 23.1 75 0.0026 30.9 4.4 33 271-307 73-105 (143)
275 3hct_A TNF receptor-associated 22.6 27 0.00093 31.5 1.2 35 142-184 16-50 (118)
276 2egq_A FHL1 protein; LIM domai 22.4 61 0.0021 26.6 3.3 12 245-256 45-56 (77)
277 1iml_A CRIP, cysteine rich int 22.3 44 0.0015 27.6 2.3 28 201-230 2-29 (76)
278 2eli_A Protein kinase C alpha 22.3 63 0.0021 28.1 3.4 34 283-317 29-62 (85)
279 1wgs_A MYST histone acetyltran 22.2 1.1E+02 0.0038 29.1 5.3 35 803-838 14-52 (133)
280 1j2o_A FLIN2, fusion of rhombo 22.1 66 0.0022 28.9 3.6 32 245-276 29-60 (114)
281 6rxn_A Rubredoxin; electron tr 22.0 56 0.0019 26.0 2.7 32 215-247 5-37 (46)
282 4b6d_A RAC GTPase-activating p 22.0 38 0.0013 28.2 1.8 33 282-316 19-51 (61)
283 1r79_A Diacylglycerol kinase, 21.9 38 0.0013 30.0 1.9 33 284-316 40-72 (84)
284 2dkt_A Ring finger and CHY zin 21.7 50 0.0017 32.2 2.8 19 203-222 105-123 (143)
285 2eay_A Biotin [acetyl-COA-carb 21.4 53 0.0018 33.5 3.2 44 804-853 187-231 (233)
286 1x6a_A LIMK-2, LIM domain kina 21.3 71 0.0024 26.6 3.5 13 244-256 39-51 (81)
287 1ptq_A Protein kinase C delta 21.3 43 0.0015 25.8 1.9 34 283-317 12-45 (50)
288 1bor_A Transcription factor PM 21.2 55 0.0019 25.7 2.6 22 219-247 23-44 (56)
289 1wig_A KIAA1808 protein; LIM d 21.1 81 0.0028 26.1 3.7 13 244-256 29-41 (73)
290 2eqk_A Tudor domain-containing 21.0 1.7E+02 0.0057 26.3 5.8 50 804-856 24-74 (85)
291 2l8d_A Lamin-B receptor; DNA b 20.3 1.9E+02 0.0064 24.9 5.7 46 802-847 10-55 (66)
292 1rmd_A RAG1; V(D)J recombinati 20.3 24 0.00083 31.5 0.3 34 143-184 22-55 (116)
293 2yuu_A NPKC-delta, protein kin 20.2 60 0.002 28.1 2.8 35 282-317 28-62 (83)
No 1
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=99.84 E-value=1.7e-21 Score=179.77 Aligned_cols=105 Identities=28% Similarity=0.806 Sum_probs=92.8
Q ss_pred CcccccccccccccccCcccCCceeecCCCCccccccccccCccccccCCCCCcCCCCCccccccccCCCCCceeecCCC
Q 002926 141 SNTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSCRICEICRRTGDPNKFMFCRRC 220 (864)
Q Consensus 141 s~~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~~~~~v~~~~W~CpeCk~C~VCgk~gd~~~LL~Cd~C 220 (864)
..++++|.+|..+|+ .++||.|+.|+++||+.||++...+ ++.+.|+|++|++|.+|+..++++.||+|+.|
T Consensus 4 ~~~~~~C~~C~~~g~-----~~~ll~C~~C~~~~H~~Cl~~~~~~---~~~~~W~C~~C~~C~~C~~~~~~~~ll~Cd~C 75 (111)
T 2ysm_A 4 GSSGANCAVCDSPGD-----LLDQFFCTTCGQHYHGMCLDIAVTP---LKRAGWQCPECKVCQNCKQSGEDSKMLVCDTC 75 (111)
T ss_dssp CCCCSCBTTTCCCCC-----TTTSEECSSSCCEECTTTTTCCCCT---TTSTTCCCTTTCCCTTTCCCSCCTTEEECSSS
T ss_pred CCCCCCCcCCCCCCC-----CcCCeECCCCCCCcChHHhCCcccc---ccccCccCCcCCcccccCccCCCCCeeECCCC
Confidence 457889999998873 2478999999999999999997643 34689999999999999999988899999999
Q ss_pred CCcccccccCCCCcCCCCCCccccCCCcccCCC
Q 002926 221 DAAYHCYCQHPPHKNVSSGPYLCPKHTKCHSCG 253 (864)
Q Consensus 221 ~raYH~~CL~Ppl~svP~g~W~CP~C~~C~~CG 253 (864)
+++||.+|+.|++..+|.+.|+|+.|..|..++
T Consensus 76 ~~~yH~~Cl~ppl~~~P~g~W~C~~C~~c~~g~ 108 (111)
T 2ysm_A 76 DKGYHTFCLQPVMKSVPTNGWKCKNCRICISGP 108 (111)
T ss_dssp CCEEEGGGSSSCCSSCCSSCCCCHHHHCCSCSC
T ss_pred CcHHhHHhcCCccccCCCCCcCCcCCcCcCCCC
Confidence 999999999999999999999999988776654
No 2
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=99.81 E-value=5e-21 Score=178.32 Aligned_cols=103 Identities=28% Similarity=0.789 Sum_probs=90.0
Q ss_pred ccccccccccc--cCcccCCceeecCCCCccccccccccCccccccCCCCCcCCCCCccccccccCCCCCceeecCCCCC
Q 002926 145 VMCRLCFVGEN--EGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSCRICEICRRTGDPNKFMFCRRCDA 222 (864)
Q Consensus 145 d~C~vC~~gG~--~gs~~~eeLL~Cd~C~raYH~~CL~p~~~~~~~v~~~~W~CpeCk~C~VCgk~gd~~~LL~Cd~C~r 222 (864)
++|.+|.+++. ...+..++||.|+.|+++||+.||++...+...++.+.|+|++|++|.+|+...+++.||.|+.|++
T Consensus 2 ~~C~~C~~~~~~n~k~g~~~~Li~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~C~~C~~~~~~~~ll~Cd~C~~ 81 (114)
T 2kwj_A 2 SYCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTLNMTEAVKTYKWQCIECKSCILCGTSENDDQLLFCDDCDR 81 (114)
T ss_dssp CCCSSSCCBTTBCTTTCCCCCCEECSSSCCEECTTTTTCCHHHHHHHHHTTCCCGGGCCCTTTTCCTTTTTEEECSSSCC
T ss_pred CcCccCCCCccccccCCCCCCCeEeCCCCCccchhhCCChhhhhhccCCCccCccccCccCcccccCCCCceEEcCCCCc
Confidence 58999998762 2345567999999999999999999876544445578999999999999999887789999999999
Q ss_pred cccccccCCCCcCCCCCCccccCCC
Q 002926 223 AYHCYCQHPPHKNVSSGPYLCPKHT 247 (864)
Q Consensus 223 aYH~~CL~Ppl~svP~g~W~CP~C~ 247 (864)
+||++|+.|++..+|.+.|+|+.|.
T Consensus 82 ~yH~~Cl~ppl~~~P~g~W~C~~C~ 106 (114)
T 2kwj_A 82 GYHMYCLNPPVAEPPEGSWSCHLCW 106 (114)
T ss_dssp EEETTTSSSCCSSCCSSCCCCHHHH
T ss_pred cccccccCCCccCCCCCCeECcccc
Confidence 9999999999999999999999875
No 3
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=99.80 E-value=2.5e-20 Score=173.00 Aligned_cols=106 Identities=25% Similarity=0.732 Sum_probs=89.7
Q ss_pred cccccccccccccc-cCcccCCceeecCCCCccccccccccCccccccCCCCCcCCCCCccccccccCC-CCCceeecCC
Q 002926 142 NTNVMCRLCFVGEN-EGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSCRICEICRRTG-DPNKFMFCRR 219 (864)
Q Consensus 142 ~~dd~C~vC~~gG~-~gs~~~eeLL~Cd~C~raYH~~CL~p~~~~~~~v~~~~W~CpeCk~C~VCgk~g-d~~~LL~Cd~ 219 (864)
.+.++|.+|.+.+. +..+..++||.|+.|+++||++||++.......++.+.|+|++|++|.+|+..+ +++.||.|+.
T Consensus 3 ~p~~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~C~vC~~~~~~~~~ll~Cd~ 82 (112)
T 3v43_A 3 EPIPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIECKTCSSCRDQGKNADNMLFCDS 82 (112)
T ss_dssp CCCSSBTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHHTCCHHHHHHHHTSCCCCTTTCCBTTTCCCCCTTCCCEECTT
T ss_pred ccCccccccCCchhhCcCCCchhceEhhhcCCCCCCchhcCCHHHHHHhhccccccccCCccccccCcCCCccceEEcCC
Confidence 35679999998653 234556799999999999999999876544444567899999999999999865 4457999999
Q ss_pred CCCcccccccCCCCcCCCCCCccccCCC
Q 002926 220 CDAAYHCYCQHPPHKNVSSGPYLCPKHT 247 (864)
Q Consensus 220 C~raYH~~CL~Ppl~svP~g~W~CP~C~ 247 (864)
|+++||.+|+.|++..+|.+.|+|+.|.
T Consensus 83 C~~~yH~~Cl~p~l~~~P~~~W~C~~C~ 110 (112)
T 3v43_A 83 CDRGFHMECCDPPLTRMPKGMWICQICR 110 (112)
T ss_dssp TCCEECGGGCSSCCSSCCSSCCCCTTTS
T ss_pred CCCeeecccCCCCCCCCCCCCeECCCCC
Confidence 9999999999999999999999999985
No 4
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=99.45 E-value=5.4e-14 Score=129.71 Aligned_cols=96 Identities=25% Similarity=0.610 Sum_probs=77.3
Q ss_pred cccccccCCCCCceeecCCCCCcccccccCCCCcCCCCCCccccCCCcccCCCCCCCCCCCccccccCccccCCCccccc
Q 002926 201 ICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHTKCHSCGSNVPGNGLSVRWFLGYTCCDACGRLFV 280 (864)
Q Consensus 201 ~C~VCgk~gd~~~LL~Cd~C~raYH~~CL~Ppl~svP~g~W~CP~C~~C~~CG~~~pgk~ls~rW~~~~~lC~~C~elf~ 280 (864)
+|.+|+..++.+.||.|+.|++.||..|+.+....++.+.|+|+.|..|..|+...
T Consensus 9 ~C~~C~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~W~C~~C~~C~~C~~~~------------------------ 64 (111)
T 2ysm_A 9 NCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVTPLKRAGWQCPECKVCQNCKQSG------------------------ 64 (111)
T ss_dssp CBTTTCCCCCTTTSEECSSSCCEECTTTTTCCCCTTTSTTCCCTTTCCCTTTCCCS------------------------
T ss_pred CCcCCCCCCCCcCCeECCCCCCCcChHHhCCccccccccCccCCcCCcccccCccC------------------------
Confidence 78899999877788999999999999999998877788999999997666665321
Q ss_pred cccccccccccccCCCCCCceeccCCCCccccccCCCChHHHhhhccCCCCceeCCCCCCC
Q 002926 281 KGNYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGE 341 (864)
Q Consensus 281 KgnyCpVC~K~Y~D~dg~~MVqCD~C~~WfH~eCd~l~dE~y~~~gid~~~~Y~CptCr~~ 341 (864)
+...||.|+.|+++||..|+...- ...+.+.|+|+.|..-
T Consensus 65 ---------------~~~~ll~Cd~C~~~yH~~Cl~ppl------~~~P~g~W~C~~C~~c 104 (111)
T 2ysm_A 65 ---------------EDSKMLVCDTCDKGYHTFCLQPVM------KSVPTNGWKCKNCRIC 104 (111)
T ss_dssp ---------------CCTTEEECSSSCCEEEGGGSSSCC------SSCCSSCCCCHHHHCC
T ss_pred ---------------CCCCeeECCCCCcHHhHHhcCCcc------ccCCCCCcCCcCCcCc
Confidence 124689999999999999998421 1234578999999753
No 5
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=99.39 E-value=2.4e-13 Score=126.13 Aligned_cols=86 Identities=23% Similarity=0.524 Sum_probs=75.2
Q ss_pred CCcccccccccccccccCcccCCceeecC--CCCccccccccccCccccccCCCCCcCCCCCccccccccCCCCCceeec
Q 002926 140 QSNTNVMCRLCFVGENEGCERARRMLSCK--SCGKKYHRNCLKNWAQNRDLFHWSSWKCPSCRICEICRRTGDPNKFMFC 217 (864)
Q Consensus 140 ~s~~dd~C~vC~~gG~~gs~~~eeLL~Cd--~C~raYH~~CL~p~~~~~~~v~~~~W~CpeCk~C~VCgk~gd~~~LL~C 217 (864)
...++++|.+|+.+| +||.|+ .|+++||+.||++. .++.+.|+|+.| .|.+|++... ++|
T Consensus 11 ~~~~~~~C~~C~~~G--------~ll~CD~~~Cp~~fH~~Cl~L~-----~~P~g~W~Cp~c-~C~~C~k~~~----~~C 72 (107)
T 4gne_A 11 KQMHEDYCFQCGDGG--------ELVMCDKKDCPKAYHLLCLNLT-----QPPYGKWECPWH-QCDECSSAAV----SFC 72 (107)
T ss_dssp CCSSCSSCTTTCCCS--------EEEECCSTTCCCEECTGGGTCS-----SCCSSCCCCGGG-BCTTTCSBCC----EEC
T ss_pred cCCCCCCCCcCCCCC--------cEeEECCCCCCcccccccCcCC-----cCCCCCEECCCC-CCCcCCCCCC----cCc
Confidence 345778999999776 899999 89999999999952 345789999999 7999998763 899
Q ss_pred CCCCCcccccccCCCCcCCCCCCccc
Q 002926 218 RRCDAAYHCYCQHPPHKNVSSGPYLC 243 (864)
Q Consensus 218 d~C~raYH~~CL~Ppl~svP~g~W~C 243 (864)
..|+.+||..|+...+...+...|+|
T Consensus 73 ~~Cp~sfC~~c~~g~l~~~~~~~~~c 98 (107)
T 4gne_A 73 EFCPHSFCKDHEKGALVPSALEGRLC 98 (107)
T ss_dssp SSSSCEECTTTCTTSCEECTTTTCEE
T ss_pred CCCCcchhhhccCCcceecCCCCcee
Confidence 99999999999999998888889987
No 6
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=99.31 E-value=9.6e-13 Score=122.12 Aligned_cols=88 Identities=23% Similarity=0.505 Sum_probs=66.6
Q ss_pred CCCCceeecCCCCCcccccccCCC--C-cCCCCCCccccCCCcccCCCCCCCCCCCccccccCccccCCCcccccccccc
Q 002926 209 GDPNKFMFCRRCDAAYHCYCQHPP--H-KNVSSGPYLCPKHTKCHSCGSNVPGNGLSVRWFLGYTCCDACGRLFVKGNYC 285 (864)
Q Consensus 209 gd~~~LL~Cd~C~raYH~~CL~Pp--l-~svP~g~W~CP~C~~C~~CG~~~pgk~ls~rW~~~~~lC~~C~elf~KgnyC 285 (864)
+..+.||.|+.|++.||.+|++.. + ..++.+.|+|+.|..|..|+...
T Consensus 21 g~~~~Ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~C~vC~~~~----------------------------- 71 (112)
T 3v43_A 21 KKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIECKTCSSCRDQG----------------------------- 71 (112)
T ss_dssp SCCCCCEECTTTCCEECHHHHTCCHHHHHHHHTSCCCCTTTCCBTTTCCCC-----------------------------
T ss_pred CCchhceEhhhcCCCCCCchhcCCHHHHHHhhccccccccCCccccccCcC-----------------------------
Confidence 455689999999999999999842 2 24568899999997676665321
Q ss_pred ccccccccCCCCCCceeccCCCCccccccCCCChHHHhhhccCCCCceeCCCCCC
Q 002926 286 PVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRG 340 (864)
Q Consensus 286 pVC~K~Y~D~dg~~MVqCD~C~~WfH~eCd~l~dE~y~~~gid~~~~Y~CptCr~ 340 (864)
.+...||.||.|+++||..|+... +...+.+.|+|+.|+.
T Consensus 72 ---------~~~~~ll~Cd~C~~~yH~~Cl~p~------l~~~P~~~W~C~~C~~ 111 (112)
T 3v43_A 72 ---------KNADNMLFCDSCDRGFHMECCDPP------LTRMPKGMWICQICRP 111 (112)
T ss_dssp ---------CTTCCCEECTTTCCEECGGGCSSC------CSSCCSSCCCCTTTSC
T ss_pred ---------CCccceEEcCCCCCeeecccCCCC------CCCCCCCCeECCCCCC
Confidence 123468999999999999998632 1123567999999974
No 7
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=99.26 E-value=9.4e-13 Score=122.61 Aligned_cols=95 Identities=22% Similarity=0.555 Sum_probs=71.4
Q ss_pred cccccccC-------CCCCceeecCCCCCcccccccCCCCc---CCCCCCccccCCCcccCCCCCCCCCCCccccccCcc
Q 002926 201 ICEICRRT-------GDPNKFMFCRRCDAAYHCYCQHPPHK---NVSSGPYLCPKHTKCHSCGSNVPGNGLSVRWFLGYT 270 (864)
Q Consensus 201 ~C~VCgk~-------gd~~~LL~Cd~C~raYH~~CL~Ppl~---svP~g~W~CP~C~~C~~CG~~~pgk~ls~rW~~~~~ 270 (864)
+|.+|... |+.+.||.|+.|++.||..|+.+... .++.+.|+|+.|..|..|+..
T Consensus 3 ~C~~C~~~~~~n~k~g~~~~Li~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~C~~C~~~--------------- 67 (114)
T 2kwj_A 3 YCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTLNMTEAVKTYKWQCIECKSCILCGTS--------------- 67 (114)
T ss_dssp CCSSSCCBTTBCTTTCCCCCCEECSSSCCEECTTTTTCCHHHHHHHHHTTCCCGGGCCCTTTTCC---------------
T ss_pred cCccCCCCccccccCCCCCCCeEeCCCCCccchhhCCChhhhhhccCCCccCccccCccCccccc---------------
Confidence 45566543 34558999999999999999997643 356789999999766666542
Q ss_pred ccCCCccccccccccccccccccCCCCCCceeccCCCCccccccCCCChHHHhhhccCCCCceeCCCCCC
Q 002926 271 CCDACGRLFVKGNYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRG 340 (864)
Q Consensus 271 lC~~C~elf~KgnyCpVC~K~Y~D~dg~~MVqCD~C~~WfH~eCd~l~dE~y~~~gid~~~~Y~CptCr~ 340 (864)
.++..||.||.|+++||..|+... +...+.+.|+|+.|..
T Consensus 68 ------------------------~~~~~ll~Cd~C~~~yH~~Cl~pp------l~~~P~g~W~C~~C~~ 107 (114)
T 2kwj_A 68 ------------------------ENDDQLLFCDDCDRGYHMYCLNPP------VAEPPEGSWSCHLCWE 107 (114)
T ss_dssp ------------------------TTTTTEEECSSSCCEEETTTSSSC------CSSCCSSCCCCHHHHH
T ss_pred ------------------------CCCCceEEcCCCCccccccccCCC------ccCCCCCCeECccccc
Confidence 124579999999999999999842 1123567999999963
No 8
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=99.18 E-value=1.4e-11 Score=106.11 Aligned_cols=55 Identities=36% Similarity=0.960 Sum_probs=52.0
Q ss_pred CCcCCCCCccccccccCCCCCceeecCCCCCcccccccCCCCcCCCCC-CccccCCC
Q 002926 192 SSWKCPSCRICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSG-PYLCPKHT 247 (864)
Q Consensus 192 ~~W~CpeCk~C~VCgk~gd~~~LL~Cd~C~raYH~~CL~Ppl~svP~g-~W~CP~C~ 247 (864)
..|+|++| +|.+|++..+.+.||.|+.|+++||++|++|++..+|.+ .|+|+.|.
T Consensus 12 ~~w~C~~C-~C~~C~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~ 67 (70)
T 3asl_A 12 VNRLCRVC-ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECR 67 (70)
T ss_dssp TTSCCTTT-SBTTTCCCSCGGGEEECTTTCCEEEGGGSSSCCSSCCSSSCCCCTTTS
T ss_pred CCeECCCC-CCcCCCCcCCCCCEEEcCCCCCceecccCCCCcCCCCCCCCcCCcCcc
Confidence 57999999 999999888778999999999999999999999999999 99999986
No 9
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.14 E-value=3.2e-11 Score=105.80 Aligned_cols=55 Identities=36% Similarity=0.950 Sum_probs=51.6
Q ss_pred CCcCCCCCccccccccCCCCCceeecCCCCCcccccccCCCCcCCCCC-CccccCCC
Q 002926 192 SSWKCPSCRICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSG-PYLCPKHT 247 (864)
Q Consensus 192 ~~W~CpeCk~C~VCgk~gd~~~LL~Cd~C~raYH~~CL~Ppl~svP~g-~W~CP~C~ 247 (864)
..|+|++| +|.+|+...+.+.||.|+.|+++||++|+.|++..+|.+ .|+|+.|.
T Consensus 20 ~~w~C~~c-~C~vC~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~ 75 (77)
T 2e6s_A 20 PEKKCHSC-SCRVCGGKHEPNMQLLCDECNVAYHIYCLNPPLDKVPEEEYWYCPSCK 75 (77)
T ss_dssp SSSCCSSS-SCSSSCCCCCSTTEEECSSSCCEEETTSSSSCCSSCCCSSCCCCTTTC
T ss_pred CCeECCCC-CCcCcCCcCCCCCEEEcCCCCccccccccCCCccCCCCCCCcCCcCcc
Confidence 46999999 999999987778999999999999999999999999999 99999985
No 10
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=99.14 E-value=2.7e-11 Score=106.34 Aligned_cols=55 Identities=36% Similarity=0.959 Sum_probs=52.3
Q ss_pred CCcCCCCCccccccccCCCCCceeecCCCCCcccccccCCCCcCCCCCC-ccccCCC
Q 002926 192 SSWKCPSCRICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSGP-YLCPKHT 247 (864)
Q Consensus 192 ~~W~CpeCk~C~VCgk~gd~~~LL~Cd~C~raYH~~CL~Ppl~svP~g~-W~CP~C~ 247 (864)
..|+|+.| .|.+|+...+++.||+|+.|+++||++|+.|++..+|.+. |+|+.|.
T Consensus 20 ~~W~C~~C-~C~vC~~~~d~~~ll~CD~C~~~yH~~Cl~PpL~~~P~g~~W~C~~C~ 75 (77)
T 3shb_A 20 VNRLCRVC-ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECR 75 (77)
T ss_dssp TTSCCTTT-SBTTTCCCSCGGGEEECTTTCCEEETTTSSSCCSSCCSSSCCCCTTTC
T ss_pred CCCCCCCC-cCCccCCCCCCcceeEeCCCCCccCcccCCCcccCCCCCCceECcCcc
Confidence 57999999 9999999988889999999999999999999999999998 9999986
No 11
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.01 E-value=9.5e-11 Score=105.76 Aligned_cols=58 Identities=34% Similarity=0.828 Sum_probs=54.1
Q ss_pred CCCcCCCCCccccccccCCCCCceeecCCCCCcccccccCCCCcCCCCCCccccCCCc
Q 002926 191 WSSWKCPSCRICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHTK 248 (864)
Q Consensus 191 ~~~W~CpeCk~C~VCgk~gd~~~LL~Cd~C~raYH~~CL~Ppl~svP~g~W~CP~C~~ 248 (864)
...|.|.++.+|.+|+..++.+.||.|+.|+++||++|+.|++..+|.+.|+|+.|..
T Consensus 8 ~s~~~~~~~~~C~vC~~~~~~~~ll~CD~C~~~~H~~Cl~Ppl~~~P~g~W~C~~C~~ 65 (92)
T 2e6r_A 8 HSSAQFIDSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCIL 65 (92)
T ss_dssp CCCCCCCCCCCCSSSCCSGGGGGCEECTTTCCEECSSSSSSCCSSCCSSCCCCHHHHH
T ss_pred CchhhccCCCCCccCCCcCCCCCEEEcCCCCchhccccCCCCcccCCCCCcCCccCcC
Confidence 4689999999999999998777899999999999999999999999999999999863
No 12
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=98.95 E-value=3e-10 Score=91.42 Aligned_cols=47 Identities=32% Similarity=0.996 Sum_probs=44.2
Q ss_pred cccccccCCCCCceeecCCCCCcccccccCCCCcCCCCCCccccCCC
Q 002926 201 ICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHT 247 (864)
Q Consensus 201 ~C~VCgk~gd~~~LL~Cd~C~raYH~~CL~Ppl~svP~g~W~CP~C~ 247 (864)
+|.+|+..++.+.||.|+.|+++||.+|+.|++..+|.+.|+|+.|.
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~C~~~~H~~Cl~p~l~~~P~g~W~C~~C~ 48 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQ 48 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTS
T ss_pred CCCCCCCCCCCCCEEECCCCChhhCcccCCCCcCCCCCCcEECcCcc
Confidence 58899998888899999999999999999999999999999999986
No 13
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=98.92 E-value=5.2e-10 Score=115.61 Aligned_cols=55 Identities=36% Similarity=0.960 Sum_probs=48.2
Q ss_pred CCcCCCCCccccccccCCCCCceeecCCCCCcccccccCCCCcCCCCC-CccccCCC
Q 002926 192 SSWKCPSCRICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSG-PYLCPKHT 247 (864)
Q Consensus 192 ~~W~CpeCk~C~VCgk~gd~~~LL~Cd~C~raYH~~CL~Ppl~svP~g-~W~CP~C~ 247 (864)
..|.|..| .|.+|+...+.+.||+|+.|+++||++|+.||+..+|.+ .|+|+.|.
T Consensus 168 ~~w~C~~c-~C~vC~~~~~~~~lL~CD~C~~~yH~~CL~PPL~~vP~G~~W~Cp~C~ 223 (226)
T 3ask_A 168 VNRLCRVC-ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECR 223 (226)
T ss_dssp TTSCCTTT-SCSSSCCCCC--CCEECSSSCCEECSCC--CCCCSCCSSSCCCCGGGC
T ss_pred cCEecCCC-CCcCCCCCCCCCCeEEcCCCCcceeCccCCCCcccCCCCCCCCCcCCc
Confidence 57999999 999999988778999999999999999999999999998 99999985
No 14
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=98.91 E-value=1.5e-09 Score=100.72 Aligned_cols=67 Identities=27% Similarity=0.719 Sum_probs=56.6
Q ss_pred cccccccCCCCCceeecC--CCCCcccccccCCCCcCCCCCCccccCCCcccCCCCCCCCCCCccccccCccccCCCccc
Q 002926 201 ICEICRRTGDPNKFMFCR--RCDAAYHCYCQHPPHKNVSSGPYLCPKHTKCHSCGSNVPGNGLSVRWFLGYTCCDACGRL 278 (864)
Q Consensus 201 ~C~VCgk~gd~~~LL~Cd--~C~raYH~~CL~Ppl~svP~g~W~CP~C~~C~~CG~~~pgk~ls~rW~~~~~lC~~C~el 278 (864)
+|.+|+.+| .||.|+ .|+++||+.|++ +..+|.+.|+||.|. |..|++..
T Consensus 17 ~C~~C~~~G---~ll~CD~~~Cp~~fH~~Cl~--L~~~P~g~W~Cp~c~-C~~C~k~~---------------------- 68 (107)
T 4gne_A 17 YCFQCGDGG---ELVMCDKKDCPKAYHLLCLN--LTQPPYGKWECPWHQ-CDECSSAA---------------------- 68 (107)
T ss_dssp SCTTTCCCS---EEEECCSTTCCCEECTGGGT--CSSCCSSCCCCGGGB-CTTTCSBC----------------------
T ss_pred CCCcCCCCC---cEeEECCCCCCcccccccCc--CCcCCCCCEECCCCC-CCcCCCCC----------------------
Confidence 677788666 899999 899999999998 788999999999997 77776431
Q ss_pred cccccccccccccccCCCCCCceeccCCCCccccccCC
Q 002926 279 FVKGNYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDG 316 (864)
Q Consensus 279 f~KgnyCpVC~K~Y~D~dg~~MVqCD~C~~WfH~eCd~ 316 (864)
-+.|..|+..||.+|..
T Consensus 69 ---------------------~~~C~~Cp~sfC~~c~~ 85 (107)
T 4gne_A 69 ---------------------VSFCEFCPHSFCKDHEK 85 (107)
T ss_dssp ---------------------CEECSSSSCEECTTTCT
T ss_pred ---------------------CcCcCCCCcchhhhccC
Confidence 16789999999999976
No 15
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=98.85 E-value=3e-09 Score=95.65 Aligned_cols=57 Identities=21% Similarity=0.566 Sum_probs=51.2
Q ss_pred CCCCcCCCCCccccccccCCCCCceeecCCCCCcccccccCCCCcCCCCCCccccCCCcc
Q 002926 190 HWSSWKCPSCRICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHTKC 249 (864)
Q Consensus 190 ~~~~W~CpeCk~C~VCgk~gd~~~LL~Cd~C~raYH~~CL~Ppl~svP~g~W~CP~C~~C 249 (864)
....|...+-.+|.+|+.++ .||.|+.|+++||++|+.|++..+|.+.|+|+.|..+
T Consensus 16 ~~~~~~d~n~~~C~vC~~~g---~LL~CD~C~~~fH~~Cl~PpL~~~P~g~W~C~~C~~~ 72 (88)
T 1fp0_A 16 DEFGTLDDSATICRVCQKPG---DLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVL 72 (88)
T ss_dssp CCCCSSSSSSSCCSSSCSSS---CCEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCC
T ss_pred ccccccCCCCCcCcCcCCCC---CEEECCCCCCceecccCCCCCCCCcCCCcCCccccCC
Confidence 35678888888999999887 7999999999999999999999999999999998754
No 16
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=98.81 E-value=1.3e-09 Score=109.53 Aligned_cols=63 Identities=37% Similarity=0.922 Sum_probs=51.0
Q ss_pred cccccccccccccCCC-CCCceeccCCCCccccccCCCChHHHhhhcc-CCCCceeCCCCCCCCc
Q 002926 281 KGNYCPVCLKVYRDSE-STPMVCCDVCQRWVHCQCDGISDEKYLQFQV-DGNLQYRCPTCRGECY 343 (864)
Q Consensus 281 KgnyCpVC~K~Y~D~d-g~~MVqCD~C~~WfH~eCd~l~dE~y~~~gi-d~~~~Y~CptCr~~~~ 343 (864)
+|+||++|.+.|.+++ +..||+||.|..|||..|++++++.+..+.. +....|+|+.|+....
T Consensus 1 ~G~~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~~~ 65 (183)
T 3lqh_A 1 SGNFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERHP 65 (183)
T ss_dssp -CCBCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCSSS
T ss_pred CcCcCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCCCCC
Confidence 4789999999998876 5789999999999999999998877766532 1224799999997643
No 17
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=98.76 E-value=4.2e-09 Score=88.26 Aligned_cols=44 Identities=34% Similarity=1.070 Sum_probs=40.1
Q ss_pred cccccccCCCCCceeecCCCCCcccccccCCCCcCCCCCCccccCCC
Q 002926 201 ICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHT 247 (864)
Q Consensus 201 ~C~VCgk~gd~~~LL~Cd~C~raYH~~CL~Ppl~svP~g~W~CP~C~ 247 (864)
+|.+|+..+ .||.|+.|+++||.+|+.|++..+|.+.|+|+.|.
T Consensus 11 ~C~vC~~~g---~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~ 54 (61)
T 1mm2_A 11 FCRVCKDGG---ELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 54 (61)
T ss_dssp SCTTTCCCS---SCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTT
T ss_pred cCCCCCCCC---CEEEcCCCCHHHcccccCCCcCcCCCCccCChhhc
Confidence 677777665 89999999999999999999999999999999986
No 18
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=98.74 E-value=3.5e-09 Score=90.39 Aligned_cols=44 Identities=23% Similarity=0.612 Sum_probs=39.9
Q ss_pred cccccccCCCCCceeecCCCCCcccccccCCCCcCCCCCCccccCCC
Q 002926 201 ICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHT 247 (864)
Q Consensus 201 ~C~VCgk~gd~~~LL~Cd~C~raYH~~CL~Ppl~svP~g~W~CP~C~ 247 (864)
.|.+|++.+ .||.|+.|+++||++|+.|++..+|.+.|+|+.|.
T Consensus 14 ~C~vC~~~~---~ll~Cd~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~ 57 (66)
T 2lri_C 14 RCGVCGDGT---DVLRCTHCAAAFHWRCHFPAGTSRPGTGLRCRSCS 57 (66)
T ss_dssp CCTTTSCCT---TCEECSSSCCEECHHHHCTTTCCCCSSSCCCTTTT
T ss_pred CcCCCCCCC---eEEECCCCCCceecccCCCccCcCCCCCEECcccc
Confidence 567777665 79999999999999999999999999999999985
No 19
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=98.72 E-value=6.4e-09 Score=87.12 Aligned_cols=46 Identities=30% Similarity=0.882 Sum_probs=41.0
Q ss_pred CccccccccCCCCCceeecCCCCCcccccccCCCCcCCCCCCccccCCC
Q 002926 199 CRICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHT 247 (864)
Q Consensus 199 Ck~C~VCgk~gd~~~LL~Cd~C~raYH~~CL~Ppl~svP~g~W~CP~C~ 247 (864)
-.+|.+|+..+ .||.|+.|+++||..|+.|++..+|.+.|+|+.|.
T Consensus 11 ~~~C~vC~~~g---~ll~CD~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~ 56 (61)
T 2l5u_A 11 QDYCEVCQQGG---EIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCE 56 (61)
T ss_dssp CSSCTTTSCCS---SEEECSSSSCEEEHHHHCTTCCSCCCSSCCCTTGG
T ss_pred CCCCccCCCCC---cEEECCCCChhhhhhccCCCCCCCCCCceECcccc
Confidence 34677888765 89999999999999999999999999999999985
No 20
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.71 E-value=4e-09 Score=86.73 Aligned_cols=44 Identities=34% Similarity=1.099 Sum_probs=39.7
Q ss_pred cccccccCCCCCceeecCCCCCcccccccCCCCcCCCCCCccccCCC
Q 002926 201 ICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHT 247 (864)
Q Consensus 201 ~C~VCgk~gd~~~LL~Cd~C~raYH~~CL~Ppl~svP~g~W~CP~C~ 247 (864)
+|.+|+..+ .||.|+.|+++||..|+.|++..+|.+.|+|+.|.
T Consensus 11 ~C~vC~~~g---~ll~Cd~C~~~~H~~Cl~ppl~~~p~g~W~C~~C~ 54 (56)
T 2yql_A 11 FCSVCRKSG---QLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQ 54 (56)
T ss_dssp SCSSSCCSS---CCEECSSSSCEECSSSSSSCCCSCCCSSCCCHHHH
T ss_pred CCccCCCCC---eEEEcCCCCcceECccCCCCcCCCCCCceEChhhh
Confidence 566777765 89999999999999999999999999999999985
No 21
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=98.70 E-value=1.5e-08 Score=91.18 Aligned_cols=61 Identities=20% Similarity=0.510 Sum_probs=48.4
Q ss_pred ccccCCCcccccccccccccccCcccCCceeecCCCCccccccccccCccccccCCCCCcCCCCCccccccc
Q 002926 135 GEEQGQSNTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSCRICEICR 206 (864)
Q Consensus 135 ~de~~~s~~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~~~~~v~~~~W~CpeCk~C~VCg 206 (864)
........++++|.+|+.+| +||+|+.|+++||+.|+.|+... ++.+.|+|+.|..+...+
T Consensus 16 ~~~~~~d~n~~~C~vC~~~g--------~LL~CD~C~~~fH~~Cl~PpL~~---~P~g~W~C~~C~~~~~~k 76 (88)
T 1fp0_A 16 DEFGTLDDSATICRVCQKPG--------DLVMCNQCEFCFHLDCHLPALQD---VPGEEWSCSLCHVLPDLK 76 (88)
T ss_dssp CCCCSSSSSSSCCSSSCSSS--------CCEECTTSSCEECTTSSSTTCCC---CCSSSCCCCSCCCCCSSC
T ss_pred ccccccCCCCCcCcCcCCCC--------CEEECCCCCCceecccCCCCCCC---CcCCCcCCccccCCCccc
Confidence 33445566788999999876 89999999999999999987653 457899999996554433
No 22
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=98.70 E-value=4.4e-09 Score=89.25 Aligned_cols=44 Identities=32% Similarity=0.899 Sum_probs=39.7
Q ss_pred cccccccCCCCCceeecCCCCCcccccccCCCCcCCCCCCccccCCC
Q 002926 201 ICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHT 247 (864)
Q Consensus 201 ~C~VCgk~gd~~~LL~Cd~C~raYH~~CL~Ppl~svP~g~W~CP~C~ 247 (864)
+|.+|+..+ .||.|+.|+++||..|+.|++..+|.+.|+|+.|.
T Consensus 10 ~C~vC~~~g---~ll~CD~C~~~fH~~Cl~ppl~~~P~g~W~C~~C~ 53 (66)
T 1xwh_A 10 ECAVCRDGG---ELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCL 53 (66)
T ss_dssp SBSSSSCCS---SCEECSSCCCEECTTTSSSCCSSCCSSCCCCHHHH
T ss_pred CCccCCCCC---CEEEcCCCChhhcccccCCCcCcCCCCCeECcccc
Confidence 566777665 89999999999999999999999999999999986
No 23
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=98.69 E-value=5.9e-09 Score=96.55 Aligned_cols=109 Identities=18% Similarity=0.353 Sum_probs=71.8
Q ss_pred CCccccccccCCCCCceeecCCCCCcccccccCCCCcCCCCCCccccCCCcccCCCCCCCCCCCccccccCccccCCCcc
Q 002926 198 SCRICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHTKCHSCGSNVPGNGLSVRWFLGYTCCDACGR 277 (864)
Q Consensus 198 eCk~C~VCgk~gd~~~LL~Cd~C~raYH~~CL~Ppl~svP~g~W~CP~C~~C~~CG~~~pgk~ls~rW~~~~~lC~~C~e 277 (864)
+|.+|.+|++.. |+.|...||..|++++ .|.|..|+.+..++.. +..|..|
T Consensus 6 rC~~C~~C~~~~-------C~~C~~c~~~~~~~~~-------~~~~~~c~~~~~~~~~-------------~~~~~~c-- 56 (117)
T 4bbq_A 6 RCRKCKACVQGE-------CGVCHYCRDMKKFGGP-------GRMKQSCVLRQCLAPR-------------LPHSVTC-- 56 (117)
T ss_dssp CCSCSHHHHSCC-------CSCSHHHHHSGGGTSC-------CCSCCCCGGGCCSSCB-------------CCTTCBC--
T ss_pred cCCcCcCcCCcC-------CCCCCCCcCCcccCCC-------Cccccchhheeecccc-------------ccccccc--
Confidence 577888998653 9999999999999864 5888888754444221 1122222
Q ss_pred ccccccccccccccccCC-CCCCceeccCCCCccccccCCCChHHHhhhccCCCCceeCCCCCCCC
Q 002926 278 LFVKGNYCPVCLKVYRDS-ESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGEC 342 (864)
Q Consensus 278 lf~KgnyCpVC~K~Y~D~-dg~~MVqCD~C~~WfH~eCd~l~dE~y~~~gid~~~~Y~CptCr~~~ 342 (864)
.+|..|...+.+. ....||+|+.|..|||..|+++..+.+. ..+....|.|+.|+.++
T Consensus 57 -----~~c~~c~~c~~~~~~~~~m~~C~~C~~~~H~~C~~~~~~~~~--~~~~~~~~~C~~C~~~~ 115 (117)
T 4bbq_A 57 -----SLCGEVDQNEETQDFEKKLMECCICNEIVHPGCLQMDGEGLL--NEELPNCWECPKCYQED 115 (117)
T ss_dssp -----TTTCCBCCHHHHCCGGGSCEEETTTCCEECGGGCCSCCCCEE--CSSSSSEEECTTTC---
T ss_pred -----cccCcccccccccccCcceEEeeecCCeEECCCCCCCccccc--cccCCCCeECCCCcCCC
Confidence 2455565555332 2456899999999999999997544321 12223479999998754
No 24
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=98.69 E-value=4.6e-09 Score=87.41 Aligned_cols=44 Identities=34% Similarity=1.099 Sum_probs=40.2
Q ss_pred cccccccCCCCCceeecCCCCCcccccccCCCCcCCCCCCccccCCC
Q 002926 201 ICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHT 247 (864)
Q Consensus 201 ~C~VCgk~gd~~~LL~Cd~C~raYH~~CL~Ppl~svP~g~W~CP~C~ 247 (864)
+|.+|+..+ .||.|+.|+++||..|+.|++..+|.+.|+|+.|.
T Consensus 7 ~C~vC~~~g---~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~ 50 (60)
T 2puy_A 7 FCSVCRKSG---QLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQ 50 (60)
T ss_dssp SCTTTCCCS---SCEECSSSSCEECGGGSSSCCSSCCCSCCCCHHHH
T ss_pred CCcCCCCCC---cEEEcCCCCcCEECCcCCCCcCCCCCCceEChhcc
Confidence 677888765 89999999999999999999999999999999985
No 25
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=98.60 E-value=2.2e-08 Score=83.83 Aligned_cols=47 Identities=32% Similarity=0.853 Sum_probs=40.4
Q ss_pred cccccccccccccccCcccCCceeecCCCCccccccccccCccccccCCCCCcCCCCC
Q 002926 142 NTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSC 199 (864)
Q Consensus 142 ~~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~~~~~v~~~~W~CpeC 199 (864)
.++.+|.+|+.++ +||.|+.|.++||+.|+.++... ++.+.|+|+.|
T Consensus 7 ~~~~~C~vC~~~g--------~ll~Cd~C~~~fH~~Cl~ppl~~---~p~g~W~C~~C 53 (61)
T 1mm2_A 7 HHMEFCRVCKDGG--------ELLCCDTCPSSYHIHCLNPPLPE---IPNGEWLCPRC 53 (61)
T ss_dssp SSCSSCTTTCCCS--------SCBCCSSSCCCBCSSSSSSCCSS---CCSSCCCCTTT
T ss_pred CCCCcCCCCCCCC--------CEEEcCCCCHHHcccccCCCcCc---CCCCccCChhh
Confidence 4567999999765 89999999999999999987653 34789999999
No 26
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=98.59 E-value=2.2e-08 Score=85.49 Aligned_cols=49 Identities=22% Similarity=0.539 Sum_probs=40.7
Q ss_pred CcccccccccccccccCcccCCceeecCCCCccccccccccCccccccCCCCCcCCCCCc
Q 002926 141 SNTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSCR 200 (864)
Q Consensus 141 s~~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~~~~~v~~~~W~CpeCk 200 (864)
..+...|.+|+.++ +||+|+.|.++||++||.+++.. ++.+.|+|+.|.
T Consensus 9 ~~~~~~C~vC~~~~--------~ll~Cd~C~~~~H~~Cl~P~l~~---~P~g~W~C~~C~ 57 (66)
T 2lri_C 9 LAPGARCGVCGDGT--------DVLRCTHCAAAFHWRCHFPAGTS---RPGTGLRCRSCS 57 (66)
T ss_dssp CCTTCCCTTTSCCT--------TCEECSSSCCEECHHHHCTTTCC---CCSSSCCCTTTT
T ss_pred CCCCCCcCCCCCCC--------eEEECCCCCCceecccCCCccCc---CCCCCEECcccc
Confidence 34556899998765 89999999999999999987654 357899999983
No 27
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=98.58 E-value=1.4e-08 Score=86.10 Aligned_cols=48 Identities=25% Similarity=0.782 Sum_probs=41.0
Q ss_pred CcccccccccccccccCcccCCceeecCCCCccccccccccCccccccCCCCCcCCCCC
Q 002926 141 SNTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSC 199 (864)
Q Consensus 141 s~~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~~~~~v~~~~W~CpeC 199 (864)
..++++|.+|..+| +||.|+.|.++||+.|+.|++.. ++.+.|+|+.|
T Consensus 5 ~~~~~~C~vC~~~g--------~ll~CD~C~~~fH~~Cl~ppl~~---~P~g~W~C~~C 52 (66)
T 1xwh_A 5 QKNEDECAVCRDGG--------ELICCDGCPRAFHLACLSPPLRE---IPSGTWRCSSC 52 (66)
T ss_dssp CSCCCSBSSSSCCS--------SCEECSSCCCEECTTTSSSCCSS---CCSSCCCCHHH
T ss_pred CCCCCCCccCCCCC--------CEEEcCCCChhhcccccCCCcCc---CCCCCeECccc
Confidence 45678999999876 89999999999999999987653 34689999988
No 28
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.57 E-value=1.4e-08 Score=90.85 Aligned_cols=48 Identities=25% Similarity=0.663 Sum_probs=41.8
Q ss_pred cccccccCCC--CCceeecCCCCCcccccccCCCCcC----CCCCCccccCCCc
Q 002926 201 ICEICRRTGD--PNKFMFCRRCDAAYHCYCQHPPHKN----VSSGPYLCPKHTK 248 (864)
Q Consensus 201 ~C~VCgk~gd--~~~LL~Cd~C~raYH~~CL~Ppl~s----vP~g~W~CP~C~~ 248 (864)
+|.+|+.... .+.||+|+.|+++||++|+.|++.. +|.+.|+|+.|..
T Consensus 18 ~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~ 71 (88)
T 1wev_A 18 ACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTR 71 (88)
T ss_dssp SCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHH
T ss_pred cCCCCCCCCCCCCCceEECCCCCCeEcCccCCCcccccccCCCCCCeeCccccc
Confidence 7888887654 3589999999999999999999984 8999999999864
No 29
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=98.55 E-value=3e-08 Score=83.06 Aligned_cols=49 Identities=27% Similarity=0.794 Sum_probs=41.2
Q ss_pred CcccccccccccccccCcccCCceeecCCCCccccccccccCccccccCCCCCcCCCCCc
Q 002926 141 SNTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSCR 200 (864)
Q Consensus 141 s~~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~~~~~v~~~~W~CpeCk 200 (864)
..++.+|.+|..++ +||.|+.|.++||+.|+.++... ++.+.|+|+.|.
T Consensus 8 ~~~~~~C~vC~~~g--------~ll~CD~C~~~fH~~Cl~p~l~~---~p~g~W~C~~C~ 56 (61)
T 2l5u_A 8 TDHQDYCEVCQQGG--------EIILCDTCPRAYHMVCLDPDMEK---APEGKWSCPHCE 56 (61)
T ss_dssp SCCCSSCTTTSCCS--------SEEECSSSSCEEEHHHHCTTCCS---CCCSSCCCTTGG
T ss_pred CCCCCCCccCCCCC--------cEEECCCCChhhhhhccCCCCCC---CCCCceECcccc
Confidence 44667999999865 89999999999999999997643 357899999984
No 30
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=98.55 E-value=1.5e-08 Score=85.40 Aligned_cols=48 Identities=29% Similarity=0.852 Sum_probs=40.6
Q ss_pred cccccccC--CCCCceeecCCCCCcccccccCCCCcC--C-CCCCccccCCCc
Q 002926 201 ICEICRRT--GDPNKFMFCRRCDAAYHCYCQHPPHKN--V-SSGPYLCPKHTK 248 (864)
Q Consensus 201 ~C~VCgk~--gd~~~LL~Cd~C~raYH~~CL~Ppl~s--v-P~g~W~CP~C~~ 248 (864)
+|.+|+.. .+.+.||+|+.|+++||++|+.|++.. + |.+.|+|+.|..
T Consensus 8 ~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~ 60 (66)
T 2yt5_A 8 VCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVF 60 (66)
T ss_dssp CBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCCHHHHH
T ss_pred CCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCcccccccCCCCCEECCCCcC
Confidence 67788876 334689999999999999999998876 4 889999999863
No 31
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=98.53 E-value=2.3e-08 Score=83.16 Aligned_cols=47 Identities=28% Similarity=0.792 Sum_probs=40.3
Q ss_pred cccccccccccccccCcccCCceeecCCCCccccccccccCccccccCCCCCcCCCCC
Q 002926 142 NTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSC 199 (864)
Q Consensus 142 ~~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~~~~~v~~~~W~CpeC 199 (864)
.++.+|.+|+.+| +||.|+.|.++||+.|++|+... ++.+.|+|+.|
T Consensus 3 ~~~~~C~vC~~~g--------~ll~Cd~C~~~fH~~Cl~ppl~~---~p~g~W~C~~C 49 (60)
T 2puy_A 3 IHEDFCSVCRKSG--------QLLMCDTCSRVYHLDCLDPPLKT---IPKGMWICPRC 49 (60)
T ss_dssp CCCSSCTTTCCCS--------SCEECSSSSCEECGGGSSSCCSS---CCCSCCCCHHH
T ss_pred CCCCCCcCCCCCC--------cEEEcCCCCcCEECCcCCCCcCC---CCCCceEChhc
Confidence 4677999999865 89999999999999999987653 34689999988
No 32
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.53 E-value=2.5e-08 Score=81.94 Aligned_cols=48 Identities=29% Similarity=0.813 Sum_probs=40.8
Q ss_pred CcccccccccccccccCcccCCceeecCCCCccccccccccCccccccCCCCCcCCCCC
Q 002926 141 SNTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSC 199 (864)
Q Consensus 141 s~~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~~~~~v~~~~W~CpeC 199 (864)
..++.+|.+|+.++ +||.|+.|.++||+.|+.|++.. ++.+.|+|+.|
T Consensus 6 ~~~~~~C~vC~~~g--------~ll~Cd~C~~~~H~~Cl~ppl~~---~p~g~W~C~~C 53 (56)
T 2yql_A 6 SGHEDFCSVCRKSG--------QLLMCDTCSRVYHLDCLDPPLKT---IPKGMWICPRC 53 (56)
T ss_dssp CSSCCSCSSSCCSS--------CCEECSSSSCEECSSSSSSCCCS---CCCSSCCCHHH
T ss_pred CCCCCCCccCCCCC--------eEEEcCCCCcceECccCCCCcCC---CCCCceEChhh
Confidence 45677999999865 89999999999999999987653 34689999988
No 33
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=98.52 E-value=3.8e-08 Score=84.92 Aligned_cols=47 Identities=28% Similarity=0.600 Sum_probs=41.1
Q ss_pred cccccccCCCCCceeecCCCCCcccccccCCCCcCCCCCCccccCCC
Q 002926 201 ICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHT 247 (864)
Q Consensus 201 ~C~VCgk~gd~~~LL~Cd~C~raYH~~CL~Ppl~svP~g~W~CP~C~ 247 (864)
+|.+|+.+.+...||.|+.|+.|||..|++++...++.+.|+|+.|.
T Consensus 20 ~C~~C~~~~~~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~ 66 (75)
T 2k16_A 20 ICPGCNKPDDGSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCA 66 (75)
T ss_dssp CBTTTTBCCSSCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTH
T ss_pred CCCCCCCCCCCCCEEEcCCCCcccccccCCCCccCCCCCCEEChhcc
Confidence 56678887666679999999999999999998887788899999986
No 34
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.49 E-value=2.5e-08 Score=89.25 Aligned_cols=56 Identities=20% Similarity=0.590 Sum_probs=43.0
Q ss_pred cccccccccccccccCcccCCceeecCCCCccccccccccCccccc-cCCCCCcCCCCCc
Q 002926 142 NTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRD-LFHWSSWKCPSCR 200 (864)
Q Consensus 142 ~~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~~~~-~v~~~~W~CpeCk 200 (864)
..+.+|.+|..+.. .....||+|+.|.++||++|+.|++...+ .++.+.|+|+.|.
T Consensus 14 e~~~~C~vC~~~~~---~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~ 70 (88)
T 1wev_A 14 EMGLACVVCRQMTV---ASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCT 70 (88)
T ss_dssp HHCCSCSSSCCCCC---CTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHH
T ss_pred CCCCcCCCCCCCCC---CCCCceEECCCCCCeEcCccCCCcccccccCCCCCCeeCcccc
Confidence 35679999998642 12248999999999999999999765321 2467999999984
No 35
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=98.48 E-value=1.7e-08 Score=85.96 Aligned_cols=54 Identities=26% Similarity=0.776 Sum_probs=46.4
Q ss_pred ccccccccccCCCCCCceecc-CCCCccccccCCCChHHHhhhccCCCCceeCCCCC
Q 002926 284 YCPVCLKVYRDSESTPMVCCD-VCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCR 339 (864)
Q Consensus 284 yCpVC~K~Y~D~dg~~MVqCD-~C~~WfH~eCd~l~dE~y~~~gid~~~~Y~CptCr 339 (864)
.|++|.+.|.+. ..||+|| .|..|||..|++++.+.|..+...+...|+|+.|.
T Consensus 10 ~C~~C~~p~~~~--~~mI~CD~~C~~WfH~~Cvglt~~~~~~l~~e~~~~w~C~~C~ 64 (65)
T 2vpb_A 10 PCGICTNEVNDD--QDAILCEASCQKWFHRICTGMTETAYGLLTAEASAVWGCDTCM 64 (65)
T ss_dssp BCTTTCSBCCTT--SCEEEBTTTTCCEEEHHHHTCCHHHHHHHHHCTTEEECCHHHH
T ss_pred cCccCCCccCCC--CCeEecccCccccCchhccCCCHHHHHHhhccCCCcEECcCcc
Confidence 588999998764 4699999 99999999999999888887755567799999985
No 36
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=98.48 E-value=6.5e-08 Score=96.20 Aligned_cols=45 Identities=27% Similarity=0.837 Sum_probs=41.2
Q ss_pred cccccccCCCCCceeecCCCCCcccccccCCCCcCCCCCCccccCCCc
Q 002926 201 ICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHTK 248 (864)
Q Consensus 201 ~C~VCgk~gd~~~LL~Cd~C~raYH~~CL~Ppl~svP~g~W~CP~C~~ 248 (864)
+|.+|+.+| .++.|+.|+++||..|+.|++..+|.+.|+|+.|..
T Consensus 6 ~C~~C~~~g---~ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~ 50 (184)
T 3o36_A 6 WCAVCQNGG---ELLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFCRD 50 (184)
T ss_dssp SCTTTCCCS---SCEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSC
T ss_pred ccccCCCCC---eeeecCCCCcccCccccCCCCCCCCCCCEECccccC
Confidence 677888776 799999999999999999999999999999999974
No 37
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=98.47 E-value=6e-08 Score=77.91 Aligned_cols=47 Identities=26% Similarity=0.803 Sum_probs=38.8
Q ss_pred cccccccccccCcccCCceeecCCCCccccccccccCccccccCCCCCcCCCCCc
Q 002926 146 MCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSCR 200 (864)
Q Consensus 146 ~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~~~~~v~~~~W~CpeCk 200 (864)
.|.+|+.+++ .+.||.|+.|.++||+.|+.|+... ++.+.|+|+.|.
T Consensus 2 ~C~vC~~~~~-----~~~ll~Cd~C~~~~H~~Cl~p~l~~---~P~g~W~C~~C~ 48 (51)
T 1f62_A 2 RCKVCRKKGE-----DDKLILCDECNKAFHLFCLRPALYE---VPDGEWQCPACQ 48 (51)
T ss_dssp CCTTTCCSSC-----CSCCEECTTTCCEECHHHHCTTCCS---CCSSCCSCTTTS
T ss_pred CCCCCCCCCC-----CCCEEECCCCChhhCcccCCCCcCC---CCCCcEECcCcc
Confidence 6999998653 2389999999999999999986653 346899999994
No 38
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=98.47 E-value=2.9e-08 Score=85.78 Aligned_cols=45 Identities=31% Similarity=0.783 Sum_probs=39.4
Q ss_pred cccccccCC--CCCceeecCCCCCcccccccCCCCcCCCCCCccccCCC
Q 002926 201 ICEICRRTG--DPNKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHT 247 (864)
Q Consensus 201 ~C~VCgk~g--d~~~LL~Cd~C~raYH~~CL~Ppl~svP~g~W~CP~C~ 247 (864)
+|.+|+..+ +++.||+|+.|+++||++|++|+ .+|.+.|+|+.|.
T Consensus 18 ~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~--~vP~g~W~C~~C~ 64 (71)
T 2ku3_A 18 VCSICMDGESQNSNVILFCDMCNLAVHQECYGVP--YIPEGQWLCRHCL 64 (71)
T ss_dssp SCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCS--SCCSSCCCCHHHH
T ss_pred CCCCCCCCCCCCCCCEEECCCCCCccccccCCCC--cCCCCCcCCccCc
Confidence 678888775 56689999999999999999986 4899999999985
No 39
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=98.46 E-value=6.7e-08 Score=97.98 Aligned_cols=46 Identities=24% Similarity=0.767 Sum_probs=41.8
Q ss_pred cccccccCCCCCceeecCCCCCcccccccCCCCcCCCCCCccccCCCcc
Q 002926 201 ICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHTKC 249 (864)
Q Consensus 201 ~C~VCgk~gd~~~LL~Cd~C~raYH~~CL~Ppl~svP~g~W~CP~C~~C 249 (864)
+|.+|+.+| .++.|+.|+++||..|+.|++..+|.+.|+|+.|...
T Consensus 9 ~C~~C~~~g---~ll~Cd~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~ 54 (207)
T 3u5n_A 9 WCAVCQNGG---DLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDI 54 (207)
T ss_dssp SBTTTCCCE---EEEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCS
T ss_pred CCCCCCCCC---ceEEcCCCCCccCCccCCCCCCCCCCCCEEeCceeCc
Confidence 677888776 7999999999999999999999999999999998753
No 40
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=98.45 E-value=3e-08 Score=88.84 Aligned_cols=45 Identities=31% Similarity=0.777 Sum_probs=39.2
Q ss_pred cccccccCC--CCCceeecCCCCCcccccccCCCCcCCCCCCccccCCC
Q 002926 201 ICEICRRTG--DPNKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHT 247 (864)
Q Consensus 201 ~C~VCgk~g--d~~~LL~Cd~C~raYH~~CL~Ppl~svP~g~W~CP~C~ 247 (864)
+|.+|+..+ +.+.||+|+.|+.+||++|++|+. +|.+.|+|+.|.
T Consensus 27 ~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~--vP~g~W~C~~C~ 73 (88)
T 2l43_A 27 VCSICMDGESQNSNVILFCDMCNLAVHQECYGVPY--IPEGQWLCRHCL 73 (88)
T ss_dssp CCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSS--CCSSCCCCHHHH
T ss_pred cCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCc--cCCCceECcccc
Confidence 677888776 556899999999999999999874 889999999986
No 41
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=98.45 E-value=3.5e-08 Score=83.11 Aligned_cols=57 Identities=25% Similarity=0.607 Sum_probs=42.5
Q ss_pred CcccccccccccccccCcccCCceeecCCCCccccccccccCccccccCCCCCcCCCCCc
Q 002926 141 SNTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSCR 200 (864)
Q Consensus 141 s~~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~~~~~v~~~~W~CpeCk 200 (864)
+.++.+|.+|+.+. +.....||+|+.|+++||+.|+.|+.......+.+.|+|+.|.
T Consensus 3 ~~~~~~C~vC~~~~---~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~ 59 (66)
T 2yt5_A 3 SGSSGVCTICQEEY---SEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCV 59 (66)
T ss_dssp CCCCCCBSSSCCCC---CBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCCHHHH
T ss_pred CCCCCCCCCCCCCC---CCCCCCEEECCCCChHHHhhhCCCcccccccCCCCCEECCCCc
Confidence 34567999999762 1223499999999999999999997653211257899999883
No 42
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=98.44 E-value=5.2e-08 Score=84.25 Aligned_cols=52 Identities=23% Similarity=0.647 Sum_probs=42.2
Q ss_pred CCcccccccccccccccCcccCCceeecCCCCccccccccccCccccccCCCCCcCCCCC
Q 002926 140 QSNTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSC 199 (864)
Q Consensus 140 ~s~~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~~~~~v~~~~W~CpeC 199 (864)
...++.+|.+|..++ +...++||+|+.|+++||++|++++. ++.+.|+|+.|
T Consensus 12 ~~~~~~~C~vC~~~~---s~~~~~ll~CD~C~~~~H~~Cl~~~~-----vP~g~W~C~~C 63 (71)
T 2ku3_A 12 LIDEDAVCSICMDGE---SQNSNVILFCDMCNLAVHQECYGVPY-----IPEGQWLCRHC 63 (71)
T ss_dssp CCCSSCSCSSSCCCC---CCSSSCEEECSSSCCEEEHHHHTCSS-----CCSSCCCCHHH
T ss_pred CCCCCCCCCCCCCCC---CCCCCCEEECCCCCCccccccCCCCc-----CCCCCcCCccC
Confidence 445677999999865 23345999999999999999999853 45789999988
No 43
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=98.43 E-value=9.6e-08 Score=95.00 Aligned_cols=48 Identities=31% Similarity=0.760 Sum_probs=41.0
Q ss_pred cccccccccccccccCcccCCceeecCCCCccccccccccCccccccCCCCCcCCCCCc
Q 002926 142 NTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSCR 200 (864)
Q Consensus 142 ~~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~~~~~v~~~~W~CpeCk 200 (864)
.++++|.+|+.+| +||+|+.|+++||..|+.|+... ++.+.|.|+.|.
T Consensus 2 ~~~~~C~~C~~~g--------~ll~Cd~C~~~~H~~C~~p~l~~---~p~~~W~C~~C~ 49 (184)
T 3o36_A 2 PNEDWCAVCQNGG--------ELLCCEKCPKVFHLSCHVPTLTN---FPSGEWICTFCR 49 (184)
T ss_dssp CSCSSCTTTCCCS--------SCEECSSSSCEECTTTSSSCCSS---CCSSCCCCTTTS
T ss_pred CCCCccccCCCCC--------eeeecCCCCcccCccccCCCCCC---CCCCCEECcccc
Confidence 3678999999876 89999999999999999987653 347899999983
No 44
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=98.42 E-value=5.4e-08 Score=81.57 Aligned_cols=54 Identities=30% Similarity=0.839 Sum_probs=42.4
Q ss_pred cccccccccccccCCCCCCceeccCCCCccccccCCCChHHHhhhccCCCCceeCCCCCCC
Q 002926 281 KGNYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGE 341 (864)
Q Consensus 281 KgnyCpVC~K~Y~D~dg~~MVqCD~C~~WfH~eCd~l~dE~y~~~gid~~~~Y~CptCr~~ 341 (864)
...||++|.+.|.+ +..||+||.|..|||..|+++..+.... ...|+|+.|+..
T Consensus 5 e~~~C~~C~~~~~~--~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~-----~~~~~C~~C~~k 58 (64)
T 1we9_A 5 SSGQCGACGESYAA--DEFWICCDLCEMWFHGKCVKITPARAEH-----IKQYKCPSCSNK 58 (64)
T ss_dssp SCCCCSSSCCCCCS--SSCEEECSSSCCEEETTTTTCCTTGGGG-----CSSCCCHHHHTT
T ss_pred CCCCCCCCCCccCC--CCCEEEccCCCCCCCccccCcChhHhcC-----CCcEECCCCcCc
Confidence 34689999999854 3579999999999999999987554321 247999999754
No 45
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=98.40 E-value=1.2e-07 Score=95.31 Aligned_cols=45 Identities=24% Similarity=0.826 Sum_probs=41.8
Q ss_pred cccccccCCCCCceeecCCCCCcccccccCCCCcCCCCCCccccCCCc
Q 002926 201 ICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHTK 248 (864)
Q Consensus 201 ~C~VCgk~gd~~~LL~Cd~C~raYH~~CL~Ppl~svP~g~W~CP~C~~ 248 (864)
+|.+|+.+| .++.|+.|+++||.+|+.|++..+|.+.|+|+.|..
T Consensus 4 ~C~~C~~~g---~ll~Cd~C~~~~H~~Cl~p~l~~~p~g~W~C~~C~~ 48 (189)
T 2ro1_A 4 ICRVCQKPG---DLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHV 48 (189)
T ss_dssp CBTTTCCCS---SCCCCTTTCCBCCSTTSTTCCSSCCCTTCCTTTTSC
T ss_pred cCccCCCCC---ceeECCCCCchhccccCCCCcccCCCCCCCCcCccC
Confidence 688999877 799999999999999999999999999999999973
No 46
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=98.40 E-value=7.8e-08 Score=86.17 Aligned_cols=52 Identities=23% Similarity=0.647 Sum_probs=41.9
Q ss_pred CCcccccccccccccccCcccCCceeecCCCCccccccccccCccccccCCCCCcCCCCC
Q 002926 140 QSNTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSC 199 (864)
Q Consensus 140 ~s~~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~~~~~v~~~~W~CpeC 199 (864)
...++.+|.+|..++ +...++||+|+.|+.+||+.|++++. ++.+.|+|+.|
T Consensus 21 ~~~~~~~C~vC~~~~---s~~~~~ll~CD~C~~~fH~~Cl~p~~-----vP~g~W~C~~C 72 (88)
T 2l43_A 21 LIDEDAVCSICMDGE---SQNSNVILFCDMCNLAVHQECYGVPY-----IPEGQWLCRHC 72 (88)
T ss_dssp CCCCCCCCSSCCSSS---SCSEEEEEECSSSCCCCCHHHHTCSS-----CCSSCCCCHHH
T ss_pred cCCCCCcCCcCCCCC---CCCCCCEEECCCCCchhhcccCCCCc-----cCCCceECccc
Confidence 345678999999865 22344899999999999999999853 45789999988
No 47
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=98.39 E-value=6.2e-08 Score=89.37 Aligned_cols=56 Identities=23% Similarity=0.713 Sum_probs=47.3
Q ss_pred ccccccccccCCCCCCceecc-CCCCccccccCCCChHHHhhhccCCCCceeCCCCCCC
Q 002926 284 YCPVCLKVYRDSESTPMVCCD-VCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGE 341 (864)
Q Consensus 284 yCpVC~K~Y~D~dg~~MVqCD-~C~~WfH~eCd~l~dE~y~~~gid~~~~Y~CptCr~~ 341 (864)
.|++|.+.|.+. ..||+|+ .|..|||..|++++.+.+..+...++..|+|+.|+..
T Consensus 5 ~C~iC~~p~~~~--~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~ 61 (105)
T 2xb1_A 5 PCGACRSEVNDD--QDAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCLKT 61 (105)
T ss_dssp BCTTTCSBCCTT--SCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHT
T ss_pred CCCCCCCccCCC--CCEEEecCCcccccccccCCcCHHHHHhhccCCCCCEECccccCc
Confidence 589999999764 4699998 9999999999999988887764456679999999854
No 48
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.37 E-value=1.3e-07 Score=85.37 Aligned_cols=59 Identities=25% Similarity=0.728 Sum_probs=45.0
Q ss_pred CcccccccccccccccCcccCCceeecCCCCccccccccccCccccccCCCCCcCCCCCccccccccC
Q 002926 141 SNTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSCRICEICRRT 208 (864)
Q Consensus 141 s~~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~~~~~v~~~~W~CpeCk~C~VCgk~ 208 (864)
..+..+|.+|..+++ ...||+|+.|.++||+.||.|++.. ++.+.|+|+.|. -..|+++
T Consensus 13 ~~~~~~C~vC~~~~~-----~~~ll~CD~C~~~~H~~Cl~Ppl~~---~P~g~W~C~~C~-~~~~~~~ 71 (92)
T 2e6r_A 13 FIDSYICQVCSRGDE-----DDKLLFCDGCDDNYHIFCLLPPLPE---IPRGIWRCPKCI-LAECKQP 71 (92)
T ss_dssp CCCCCCCSSSCCSGG-----GGGCEECTTTCCEECSSSSSSCCSS---CCSSCCCCHHHH-HHHHSCC
T ss_pred ccCCCCCccCCCcCC-----CCCEEEcCCCCchhccccCCCCccc---CCCCCcCCccCc-CccccCC
Confidence 345668999998763 2389999999999999999987653 457899999993 3334443
No 49
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=98.35 E-value=1.8e-07 Score=94.76 Aligned_cols=48 Identities=29% Similarity=0.724 Sum_probs=41.1
Q ss_pred cccccccccccccccCcccCCceeecCCCCccccccccccCccccccCCCCCcCCCCCc
Q 002926 142 NTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSCR 200 (864)
Q Consensus 142 ~~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~~~~~v~~~~W~CpeCk 200 (864)
.++++|.+|+.+| +||+|+.|+++||..|+.|+... ++.+.|.|+.|.
T Consensus 5 ~~~~~C~~C~~~g--------~ll~Cd~C~~~~H~~Cl~p~l~~---~p~~~W~C~~C~ 52 (207)
T 3u5n_A 5 PNEDWCAVCQNGG--------DLLCCEKCPKVFHLTCHVPTLLS---FPSGDWICTFCR 52 (207)
T ss_dssp SSCSSBTTTCCCE--------EEEECSSSSCEECTTTSSSCCSS---CCSSCCCCTTTS
T ss_pred CCCCCCCCCCCCC--------ceEEcCCCCCccCCccCCCCCCC---CCCCCEEeCcee
Confidence 3667999999877 89999999999999999987653 457899999984
No 50
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.26 E-value=5.2e-07 Score=79.16 Aligned_cols=50 Identities=30% Similarity=0.692 Sum_probs=39.7
Q ss_pred ccccccccccccccCcccCCceeecCCCCccccccccccCccccccCCCC-CcCCCCCc
Q 002926 143 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWS-SWKCPSCR 200 (864)
Q Consensus 143 ~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~~~~~v~~~-~W~CpeCk 200 (864)
.+..|.+|+..++ ...||+|+.|.++||++||+|++.. ++.+ .|+|+.|.
T Consensus 25 ~~c~C~vC~~~~~-----~~~ll~CD~C~~~yH~~Cl~Ppl~~---~P~g~~W~C~~C~ 75 (77)
T 2e6s_A 25 HSCSCRVCGGKHE-----PNMQLLCDECNVAYHIYCLNPPLDK---VPEEEYWYCPSCK 75 (77)
T ss_dssp SSSSCSSSCCCCC-----STTEEECSSSCCEEETTSSSSCCSS---CCCSSCCCCTTTC
T ss_pred CCCCCcCcCCcCC-----CCCEEEcCCCCccccccccCCCccC---CCCCCCcCCcCcc
Confidence 4457888986432 2399999999999999999987654 3467 99999994
No 51
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=98.25 E-value=5.3e-07 Score=82.13 Aligned_cols=43 Identities=26% Similarity=0.607 Sum_probs=36.8
Q ss_pred ccccCCCCCceeecCCCCCcccccccCCCCcCCCCCCccccCCC
Q 002926 204 ICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHT 247 (864)
Q Consensus 204 VCgk~gd~~~LL~Cd~C~raYH~~CL~Ppl~svP~g~W~CP~C~ 247 (864)
+|+...+...||.|+.|..|||..|+++++..+|. .|+|+.|.
T Consensus 32 iC~~~~~~~~mi~Cd~C~~w~H~~C~~~~~~~~p~-~w~C~~C~ 74 (98)
T 2lv9_A 32 ICGFTHDDGYMICCDKCSVWQHIDCMGIDRQHIPD-TYLCERCQ 74 (98)
T ss_dssp TTSCCSCSSCEEEBTTTCBEEETTTTTCCTTSCCS-SBCCTTTS
T ss_pred ECCCccCCCcEEEcCCCCCcCcCcCCCCCccCCCC-CEECCCCc
Confidence 56666666689999999999999999998877774 79999985
No 52
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=98.24 E-value=3.9e-07 Score=91.64 Aligned_cols=45 Identities=24% Similarity=0.695 Sum_probs=39.3
Q ss_pred cccccccccccccCcccCCceeecCCCCccccccccccCccccccCCCCCcCCCCC
Q 002926 144 NVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSC 199 (864)
Q Consensus 144 dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~~~~~v~~~~W~CpeC 199 (864)
++.|.+|+.+| +||+|+.|.++||..|+.|+... ++.+.|.|+.|
T Consensus 2 ~~~C~~C~~~g--------~ll~Cd~C~~~~H~~Cl~p~l~~---~p~g~W~C~~C 46 (189)
T 2ro1_A 2 ATICRVCQKPG--------DLVMCNQCEFCFHLDCHLPALQD---VPGEEWSCSLC 46 (189)
T ss_dssp CCCBTTTCCCS--------SCCCCTTTCCBCCSTTSTTCCSS---CCCTTCCTTTT
T ss_pred CCcCccCCCCC--------ceeECCCCCchhccccCCCCccc---CCCCCCCCcCc
Confidence 46899999877 89999999999999999987653 34789999999
No 53
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.23 E-value=4.7e-07 Score=79.17 Aligned_cols=52 Identities=35% Similarity=0.859 Sum_probs=41.1
Q ss_pred ccccccccccccCCCCCCceeccCCCCccccccCCCChHHHhhhccCCCCceeCCCCCCC
Q 002926 282 GNYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGE 341 (864)
Q Consensus 282 gnyCpVC~K~Y~D~dg~~MVqCD~C~~WfH~eCd~l~dE~y~~~gid~~~~Y~CptCr~~ 341 (864)
..|| +|.+.|++ +..||+||.|..|||..|+++..+... ....|+|+.|+..
T Consensus 12 ~~~C-~C~~~~d~--~~~MIqCd~C~~WfH~~Cvgl~~~~~~-----~~~~~~C~~C~~~ 63 (79)
T 1wep_A 12 PVYC-LCRQPYNV--NHFMIECGLCQDWFHGSCVGIEEENAV-----DIDIYHCPDCEAV 63 (79)
T ss_dssp CCCS-TTSCSCCS--SSCEEEBTTTCCEEEHHHHTCCHHHHT-----TCSBBCCTTTTTT
T ss_pred ccEE-EcCCccCC--CCceEEcCCCCCcEEeeecCccccccc-----CCCeEECCCcccc
Confidence 3477 89888743 467999999999999999998766542 1348999999864
No 54
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=98.22 E-value=6.5e-07 Score=77.04 Aligned_cols=47 Identities=30% Similarity=0.770 Sum_probs=36.9
Q ss_pred cccccccccccCcccCCceeecCCCCccccccccccCccccccCCCC-CcCCCCCc
Q 002926 146 MCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWS-SWKCPSCR 200 (864)
Q Consensus 146 ~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~~~~~v~~~-~W~CpeCk 200 (864)
.|.+|+..++ ...||.|+.|.++||+.||+|++.. ++.+ .|+|+.|.
T Consensus 20 ~C~~C~~~~~-----~~~ll~CD~C~~~yH~~Cl~Ppl~~---~P~g~~W~C~~C~ 67 (70)
T 3asl_A 20 ACHLCGGRQD-----PDKQLMCDECDMAFHIYCLDPPLSS---VPSEDEWYCPECR 67 (70)
T ss_dssp SBTTTCCCSC-----GGGEEECTTTCCEEEGGGSSSCCSS---CCSSSCCCCTTTS
T ss_pred CCcCCCCcCC-----CCCEEEcCCCCCceecccCCCCcCC---CCCCCCcCCcCcc
Confidence 5667775432 2399999999999999999987654 3467 99999994
No 55
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=98.17 E-value=1.2e-06 Score=71.06 Aligned_cols=47 Identities=34% Similarity=0.723 Sum_probs=37.1
Q ss_pred cccccccccCCCCCCceecc-CCCCccccccCCCChHHHhhhccCCCCceeCCCCC
Q 002926 285 CPVCLKVYRDSESTPMVCCD-VCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCR 339 (864)
Q Consensus 285 CpVC~K~Y~D~dg~~MVqCD-~C~~WfH~eCd~l~dE~y~~~gid~~~~Y~CptCr 339 (864)
|.+|.+.|.+ +..||+|| .|+.|||..|++++.+... ...|+|+.|+
T Consensus 5 cc~C~~p~~~--~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~------~~~~~C~~C~ 52 (52)
T 2kgg_A 5 AQNCQRPCKD--KVDWVQCDGGCDEWFHQVCVGVSPEMAE------NEDYICINCA 52 (52)
T ss_dssp CTTCCCCCCT--TCCEEECTTTTCCEEETTTTTCCHHHHH------HSCCCCSCC-
T ss_pred CCCCcCccCC--CCcEEEeCCCCCccCcccccCCCccccC------CCCEECCCCC
Confidence 6688888854 45799999 8999999999998766432 1479999995
No 56
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=98.14 E-value=2.6e-07 Score=89.68 Aligned_cols=44 Identities=18% Similarity=0.461 Sum_probs=39.5
Q ss_pred cccccccCCCCCceeecCCCCCcccccccCCCCcC-------CCCCCccccCCC
Q 002926 201 ICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKN-------VSSGPYLCPKHT 247 (864)
Q Consensus 201 ~C~VCgk~gd~~~LL~Cd~C~raYH~~CL~Ppl~s-------vP~g~W~CP~C~ 247 (864)
+|.+|+.+| .++.|+.|++.||..|+.|++.. .|.+.|.|+.|.
T Consensus 65 ~C~vC~~GG---~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~ 115 (142)
T 2lbm_A 65 QCRWCAEGG---NLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICH 115 (142)
T ss_dssp SCSSSCCCS---SEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTC
T ss_pred eecccCCCC---cEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeeccc
Confidence 888999888 89999999999999999988752 488999999986
No 57
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=98.07 E-value=7.3e-07 Score=86.56 Aligned_cols=52 Identities=19% Similarity=0.645 Sum_probs=42.5
Q ss_pred CcccccccccccccccCcccCCceeecCCCCccccccccccCccccc---c-CCCCCcCCCCCc
Q 002926 141 SNTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRD---L-FHWSSWKCPSCR 200 (864)
Q Consensus 141 s~~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~~~~---~-v~~~~W~CpeCk 200 (864)
..++++|.+|..+| +||+|+.|+++||..||.++..+.. + .+.+.|.|+.|.
T Consensus 60 Dg~~d~C~vC~~GG--------~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~ 115 (142)
T 2lbm_A 60 DGMDEQCRWCAEGG--------NLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICH 115 (142)
T ss_dssp TSCBCSCSSSCCCS--------SEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTC
T ss_pred CCCCCeecccCCCC--------cEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeeccc
Confidence 44678999999988 9999999999999999998764211 1 357899999993
No 58
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=98.07 E-value=1.8e-06 Score=75.84 Aligned_cols=47 Identities=30% Similarity=0.772 Sum_probs=36.4
Q ss_pred cccccccccccCcccCCceeecCCCCccccccccccCccccccCCCCC-cCCCCCc
Q 002926 146 MCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSS-WKCPSCR 200 (864)
Q Consensus 146 ~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~~~~~v~~~~-W~CpeCk 200 (864)
.|.+|+..++ .+.||+|+.|.++||++||.|++.. ++.+. |+|+.|+
T Consensus 28 ~C~vC~~~~d-----~~~ll~CD~C~~~yH~~Cl~PpL~~---~P~g~~W~C~~C~ 75 (77)
T 3shb_A 28 ACHLCGGRQD-----PDKQLMCDECDMAFHIYCLDPPLSS---VPSEDEWYCPECR 75 (77)
T ss_dssp SBTTTCCCSC-----GGGEEECTTTCCEEETTTSSSCCSS---CCSSSCCCCTTTC
T ss_pred cCCccCCCCC-----CcceeEeCCCCCccCcccCCCcccC---CCCCCceECcCcc
Confidence 5666665442 3489999999999999999998753 34566 9999994
No 59
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.07 E-value=3.9e-07 Score=78.93 Aligned_cols=54 Identities=33% Similarity=0.851 Sum_probs=40.6
Q ss_pred cccccccccccCCCCCCceeccCCCCccccccCCCChHHHhhhccCCCCceeCCCCCCC
Q 002926 283 NYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGE 341 (864)
Q Consensus 283 nyCpVC~K~Y~D~dg~~MVqCD~C~~WfH~eCd~l~dE~y~~~gid~~~~Y~CptCr~~ 341 (864)
.|| +|.+.|. +..||+||.|..|||..|+++.......+.. ....|+|+.|+..
T Consensus 17 ~~C-~C~~~~~---~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~-~~~~~~C~~C~~~ 70 (76)
T 1wem_A 17 LYC-ICRQPHN---NRFMICCDRCEEWFHGDCVGISEARGRLLER-NGEDYICPNCTIL 70 (76)
T ss_dssp CCS-TTCCCCC---SSCEEECSSSCCEEEHHHHSCCHHHHHHHHH-HTCCCCCHHHHHH
T ss_pred CEE-ECCCccC---CCCEEEeCCCCCcEeCeEEccchhhhhhccC-CCCeEECcCCcCc
Confidence 467 7888764 3579999999999999999998665443311 2358999999753
No 60
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=98.06 E-value=1.9e-06 Score=74.31 Aligned_cols=51 Identities=27% Similarity=0.661 Sum_probs=40.4
Q ss_pred cccccccccccccccCcccCCceeecCCCCccccccccccCccccccCCCCCcCCCCCc
Q 002926 142 NTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSCR 200 (864)
Q Consensus 142 ~~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~~~~~v~~~~W~CpeCk 200 (864)
....+|.+|....+ .+.||.|+.|.++||..|++++.... +.+.|+|+.|.
T Consensus 16 ~~~~~C~~C~~~~~-----~~~mi~CD~C~~wfH~~Cv~~~~~~~---~~~~w~C~~C~ 66 (75)
T 2k16_A 16 NQIWICPGCNKPDD-----GSPMIGCDDCDDWYHWPCVGIMAAPP---EEMQWFCPKCA 66 (75)
T ss_dssp CEEECBTTTTBCCS-----SCCEEECSSSSSEEEHHHHTCSSCCC---SSSCCCCTTTH
T ss_pred CCCcCCCCCCCCCC-----CCCEEEcCCCCcccccccCCCCccCC---CCCCEEChhcc
Confidence 35568999987642 23799999999999999999976543 24789999983
No 61
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=97.99 E-value=4.9e-06 Score=75.30 Aligned_cols=48 Identities=33% Similarity=0.899 Sum_probs=37.5
Q ss_pred ccccccccccccCCCCCCceeccC--CC-CccccccCCCChHHHhhhccCCCCceeCCCCCCCC
Q 002926 282 GNYCPVCLKVYRDSESTPMVCCDV--CQ-RWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGEC 342 (864)
Q Consensus 282 gnyCpVC~K~Y~D~dg~~MVqCD~--C~-~WfH~eCd~l~dE~y~~~gid~~~~Y~CptCr~~~ 342 (864)
..|| +|.+.+. +.||+||. |+ .|||..|+++.. .+...|+|+.|+...
T Consensus 36 ~~yC-iC~~~~~----g~MI~CD~~dC~~~WfH~~CVgl~~--------~p~g~W~Cp~C~~~~ 86 (91)
T 1weu_A 36 PTYC-LCHQVSY----GEMIGCDNPDCSIEWFHFACVGLTT--------KPRGKWFCPRCSQES 86 (91)
T ss_dssp CBCS-TTCCBCC----SCCCCCSCSSCSCCCCCSTTTTCSS--------CCCSSCCCTTTCCCC
T ss_pred CcEE-ECCCCCC----CCEeEecCCCCCCCCEecccCCcCc--------CCCCCEECcCccCcC
Confidence 3578 8987752 47999999 77 799999999753 235689999998653
No 62
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=97.97 E-value=4.1e-06 Score=72.39 Aligned_cols=43 Identities=21% Similarity=0.722 Sum_probs=35.8
Q ss_pred cccccccCCCCCceeecCC--CC-CcccccccCCCCcCCCCCCccccCCC
Q 002926 201 ICEICRRTGDPNKFMFCRR--CD-AAYHCYCQHPPHKNVSSGPYLCPKHT 247 (864)
Q Consensus 201 ~C~VCgk~gd~~~LL~Cd~--C~-raYH~~CL~Ppl~svP~g~W~CP~C~ 247 (864)
+| +|++... ..||.|+. |. .|||..|++ +..+|.+.|+||.|.
T Consensus 18 ~C-~C~~~~~-g~MI~CD~~~C~~~wfH~~Cvg--l~~~p~g~w~Cp~C~ 63 (71)
T 1wen_A 18 YC-LCHQVSY-GEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCS 63 (71)
T ss_dssp CS-TTCCCSC-SSEECCSCSSCSCCCEETTTTT--CSSCCSSCCCCTTTS
T ss_pred EE-ECCCCCC-CCEeEeeCCCCCCccEecccCC--cCcCCCCCEECCCCC
Confidence 56 6887643 47999999 77 699999999 677788999999986
No 63
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=97.96 E-value=2.6e-06 Score=88.20 Aligned_cols=49 Identities=29% Similarity=0.724 Sum_probs=36.3
Q ss_pred cccccccccccccCcccCCceeecCCCCccccccccccCccccccCCCC-CcCCCCCc
Q 002926 144 NVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWS-SWKCPSCR 200 (864)
Q Consensus 144 dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~~~~~v~~~-~W~CpeCk 200 (864)
...|.+|+..++ ...||+|+.|.++||+.||+|++.. ++.+ .|+|+.|.
T Consensus 174 ~c~C~vC~~~~~-----~~~lL~CD~C~~~yH~~CL~PPL~~---vP~G~~W~Cp~C~ 223 (226)
T 3ask_A 174 VCACHLCGGRQD-----PDKQLMCDECDMAFHIYCLDPPLSS---VPSEDEWYCPECR 223 (226)
T ss_dssp TTSCSSSCCCCC-------CCEECSSSCCEECSCC--CCCCS---CCSSSCCCCGGGC
T ss_pred CCCCcCCCCCCC-----CCCeEEcCCCCcceeCccCCCCccc---CCCCCCCCCcCCc
Confidence 456888886542 2389999999999999999997754 3467 99999993
No 64
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=97.95 E-value=2.4e-06 Score=78.96 Aligned_cols=81 Identities=20% Similarity=0.314 Sum_probs=51.8
Q ss_pred cCCCCccccccccccCcccccc------CC---CCCcCCCCCccccccccCCC-CCceeecCCCCCcccccccCCCCcCC
Q 002926 167 CKSCGKKYHRNCLKNWAQNRDL------FH---WSSWKCPSCRICEICRRTGD-PNKFMFCRRCDAAYHCYCQHPPHKNV 236 (864)
Q Consensus 167 Cd~C~raYH~~CL~p~~~~~~~------v~---~~~W~CpeCk~C~VCgk~gd-~~~LL~Cd~C~raYH~~CL~Ppl~sv 236 (864)
|+.|...||..|++.+...-.. .. ...+.|..|..|..|....+ +..|+.|+.|..|||..|+.++...+
T Consensus 18 C~~C~~c~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~c~~c~~c~~c~~~~~~~~~m~~C~~C~~~~H~~C~~~~~~~~ 97 (117)
T 4bbq_A 18 CGVCHYCRDMKKFGGPGRMKQSCVLRQCLAPRLPHSVTCSLCGEVDQNEETQDFEKKLMECCICNEIVHPGCLQMDGEGL 97 (117)
T ss_dssp CSCSHHHHHSGGGTSCCCSCCCCGGGCCSSCBCCTTCBCTTTCCBCCHHHHCCGGGSCEEETTTCCEECGGGCCSCCCCE
T ss_pred CCCCCCCcCCcccCCCCccccchhheeeccccccccccccccCcccccccccccCcceEEeeecCCeEECCCCCCCcccc
Confidence 9999999999999875432110 00 11222333333444433333 23589999999999999999865543
Q ss_pred C----CCCccccCCC
Q 002926 237 S----SGPYLCPKHT 247 (864)
Q Consensus 237 P----~g~W~CP~C~ 247 (864)
. ...|.||.|.
T Consensus 98 ~~~~~~~~~~C~~C~ 112 (117)
T 4bbq_A 98 LNEELPNCWECPKCY 112 (117)
T ss_dssp ECSSSSSEEECTTTC
T ss_pred ccccCCCCeECCCCc
Confidence 3 2359999985
No 65
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=97.94 E-value=1.3e-06 Score=74.93 Aligned_cols=47 Identities=32% Similarity=0.926 Sum_probs=36.8
Q ss_pred cccccccccccCCCCCCceeccCCCCccccccCCCChHHHhhhccCCCCceeCCCCCC
Q 002926 283 NYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRG 340 (864)
Q Consensus 283 nyCpVC~K~Y~D~dg~~MVqCD~C~~WfH~eCd~l~dE~y~~~gid~~~~Y~CptCr~ 340 (864)
.|| +|.+.+. +..||+||.|..|||..|+++.... . ...|+|+.|+.
T Consensus 20 ~~C-iC~~~~~---~~~MIqCd~C~~WfH~~Cvgi~~~~-----~--~~~~~C~~C~~ 66 (68)
T 3o70_A 20 VTC-FCMKPFA---GRPMIECNECHTWIHLSCAKIRKSN-----V--PEVFVCQKCRD 66 (68)
T ss_dssp CCS-TTCCCCT---TCCEEECTTTCCEEETTTTTCCTTS-----C--CSSCCCHHHHT
T ss_pred eEe-ECCCcCC---CCCEEECCCCCccccccccCcCccc-----C--CCcEECCCCCC
Confidence 467 8887654 5679999999999999999986431 1 24899999974
No 66
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=97.91 E-value=2.4e-06 Score=73.48 Aligned_cols=49 Identities=29% Similarity=0.632 Sum_probs=36.8
Q ss_pred cccccccccccCCCCCCceeccCCCCccccccCCCChHHHhhhccCCCCceeCCCCCC
Q 002926 283 NYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRG 340 (864)
Q Consensus 283 nyCpVC~K~Y~D~dg~~MVqCD~C~~WfH~eCd~l~dE~y~~~gid~~~~Y~CptCr~ 340 (864)
.|| +|.+.+.+ +..||+||.|..|||..|+++.... .....|+|+.|+.
T Consensus 17 ~~C-~C~~~~~~--g~~mI~Cd~C~~W~H~~Cvg~~~~~------~~~~~~~C~~C~~ 65 (72)
T 1wee_A 17 VDC-KCGTKDDD--GERMLACDGCGVWHHTRCIGINNAD------ALPSKFLCFRCIE 65 (72)
T ss_dssp ECC-TTCCCSCC--SSCEEECSSSCEEEETTTTTCCTTS------CCCSCCCCHHHHH
T ss_pred eEe-eCCCccCC--CCcEEECCCCCCccCCeeeccCccc------cCCCcEECCCccC
Confidence 367 58876533 4469999999999999999986431 1235899999975
No 67
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=97.90 E-value=6.1e-06 Score=74.66 Aligned_cols=43 Identities=21% Similarity=0.722 Sum_probs=35.5
Q ss_pred cccccccCCCCCceeecCC--CC-CcccccccCCCCcCCCCCCccccCCC
Q 002926 201 ICEICRRTGDPNKFMFCRR--CD-AAYHCYCQHPPHKNVSSGPYLCPKHT 247 (864)
Q Consensus 201 ~C~VCgk~gd~~~LL~Cd~--C~-raYH~~CL~Ppl~svP~g~W~CP~C~ 247 (864)
+| +|++... ..||.|+. |. .|||..|++ +...|.+.|+||.|.
T Consensus 38 yC-iC~~~~~-g~MI~CD~~dC~~~WfH~~CVg--l~~~p~g~W~Cp~C~ 83 (91)
T 1weu_A 38 YC-LCHQVSY-GEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCS 83 (91)
T ss_dssp CS-TTCCBCC-SCCCCCSCSSCSCCCCCSTTTT--CSSCCCSSCCCTTTC
T ss_pred EE-ECCCCCC-CCEeEecCCCCCCCCEecccCC--cCcCCCCCEECcCcc
Confidence 56 7787543 47999999 76 799999999 566778999999986
No 68
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=97.88 E-value=1.1e-05 Score=69.71 Aligned_cols=47 Identities=28% Similarity=0.765 Sum_probs=36.2
Q ss_pred CcccccccccccccccCcccCCceeecCC--CC-ccccccccccCccccccCCCCCcCCCCC
Q 002926 141 SNTNVMCRLCFVGENEGCERARRMLSCKS--CG-KKYHRNCLKNWAQNRDLFHWSSWKCPSC 199 (864)
Q Consensus 141 s~~dd~C~vC~~gG~~gs~~~eeLL~Cd~--C~-raYH~~CL~p~~~~~~~v~~~~W~CpeC 199 (864)
.....+| +|..... ..||.|+. |. .+||+.|+++... +.+.|+|+.|
T Consensus 13 ~~~~~~C-~C~~~~~------g~MI~CD~~~C~~~wfH~~Cvgl~~~-----p~g~w~Cp~C 62 (71)
T 1wen_A 13 PNEPTYC-LCHQVSY------GEMIGCDNPDCSIEWFHFACVGLTTK-----PRGKWFCPRC 62 (71)
T ss_dssp TTSCCCS-TTCCCSC------SSEECCSCSSCSCCCEETTTTTCSSC-----CSSCCCCTTT
T ss_pred CCCCCEE-ECCCCCC------CCEeEeeCCCCCCccEecccCCcCcC-----CCCCEECCCC
Confidence 3455689 7987431 28999999 88 6999999997543 3578999998
No 69
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=97.85 E-value=3.6e-06 Score=70.37 Aligned_cols=43 Identities=21% Similarity=0.722 Sum_probs=35.8
Q ss_pred cccccccCCCCCceeecCC--CC-CcccccccCCCCcCCCCCCccccCCC
Q 002926 201 ICEICRRTGDPNKFMFCRR--CD-AAYHCYCQHPPHKNVSSGPYLCPKHT 247 (864)
Q Consensus 201 ~C~VCgk~gd~~~LL~Cd~--C~-raYH~~CL~Ppl~svP~g~W~CP~C~ 247 (864)
+| +|+++.. ..||.|+. |. .|||..|++ +..+|.+.|+||.|.
T Consensus 12 ~C-~C~~~~~-g~mi~CD~cdC~~~wfH~~Cvg--l~~~p~g~w~C~~C~ 57 (60)
T 2vnf_A 12 YC-LCHQVSY-GEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCS 57 (60)
T ss_dssp ET-TTTEECC-SEEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHH
T ss_pred EE-ECCCcCC-CCEEEeCCCCCCCceEehhcCC--CCcCCCCCEECcCcc
Confidence 56 7887654 47999999 66 899999999 677888999999875
No 70
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=97.84 E-value=2.1e-06 Score=84.30 Aligned_cols=51 Identities=33% Similarity=0.791 Sum_probs=40.3
Q ss_pred ccccccccccccCCCCCCceeccCCCCccccccCCCChHHHhhhccCCCCceeCCCCCC
Q 002926 282 GNYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRG 340 (864)
Q Consensus 282 gnyCpVC~K~Y~D~dg~~MVqCD~C~~WfH~eCd~l~dE~y~~~gid~~~~Y~CptCr~ 340 (864)
..|| +|.+.|.+ ++.||+||.|+.|||..|+++..... +....|+|+.|+.
T Consensus 8 ~~~C-~C~~~~~~--~~~mi~Cd~C~~WfH~~Cv~~~~~~~-----~~~~~~~C~~C~~ 58 (174)
T 2ri7_A 8 KLYC-ICKTPEDE--SKFYIGCDRCQNWYHGRCVGILQSEA-----ELIDEYVCPQCQS 58 (174)
T ss_dssp CEET-TTTEECCT--TSCEEECTTTCCEEEHHHHTCCHHHH-----TTCSSCCCHHHHH
T ss_pred CcEe-eCCCCCCC--CCCEeECCCCCchhChhhcCCchhhc-----cCccCeecCCCcc
Confidence 4588 99988643 46799999999999999999865532 2245899999985
No 71
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=97.81 E-value=4.6e-06 Score=69.60 Aligned_cols=43 Identities=21% Similarity=0.718 Sum_probs=35.7
Q ss_pred cccccccCCCCCceeecCC--CC-CcccccccCCCCcCCCCCCccccCCC
Q 002926 201 ICEICRRTGDPNKFMFCRR--CD-AAYHCYCQHPPHKNVSSGPYLCPKHT 247 (864)
Q Consensus 201 ~C~VCgk~gd~~~LL~Cd~--C~-raYH~~CL~Ppl~svP~g~W~CP~C~ 247 (864)
+| +|+++.. ..|+.|+. |. .|||..|++ +...|.+.|+||.|.
T Consensus 11 yC-~C~~~~~-g~mi~CD~~~C~~~wfH~~Cvg--l~~~p~~~w~Cp~C~ 56 (59)
T 3c6w_A 11 YC-LCHQVSY-GEMIGCDNPDCPIEWFHFACVD--LTTKPKGKWFCPRCV 56 (59)
T ss_dssp ET-TTTEECC-SEEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHH
T ss_pred EE-ECCCCCC-CCeeEeeCCCCCCCCEecccCC--cccCCCCCEECcCcc
Confidence 56 7887643 47999999 77 699999999 667788999999985
No 72
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=97.79 E-value=2.6e-06 Score=73.87 Aligned_cols=50 Identities=36% Similarity=0.882 Sum_probs=37.5
Q ss_pred cccccccccccCCCCCCceeccCCCCccccccCCCChHHHhhhccCCCCceeCCCCCC
Q 002926 283 NYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRG 340 (864)
Q Consensus 283 nyCpVC~K~Y~D~dg~~MVqCD~C~~WfH~eCd~l~dE~y~~~gid~~~~Y~CptCr~ 340 (864)
.|| +|.+.|.+ +..||+||.|..|||..|+++..+.... ...|+|+.|+.
T Consensus 11 ~yC-iC~~~~~~--~~~MI~Cd~C~~WfH~~Cvg~~~~~~~~-----~~~~~C~~C~~ 60 (75)
T 3kqi_A 11 VYC-VCRLPYDV--TRFMIECDACKDWFHGSCVGVEEEEAPD-----IDIYHCPNCEK 60 (75)
T ss_dssp EET-TTTEECCT--TSCEEECTTTCCEEEHHHHTCCTTTGGG-----BSSCCCHHHHH
T ss_pred eEE-ECCCcCCC--CCCEEEcCCCCCCEecccccccccccCC-----CCEEECCCCcc
Confidence 356 78887643 4579999999999999999986543211 23799999974
No 73
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=97.77 E-value=7.8e-06 Score=73.84 Aligned_cols=43 Identities=23% Similarity=0.566 Sum_probs=34.7
Q ss_pred cccccccCCCCCceeecCCCC---CcccccccCCCCcCCCCCCccccC-CC
Q 002926 201 ICEICRRTGDPNKFMFCRRCD---AAYHCYCQHPPHKNVSSGPYLCPK-HT 247 (864)
Q Consensus 201 ~C~VCgk~gd~~~LL~Cd~C~---raYH~~CL~Ppl~svP~g~W~CP~-C~ 247 (864)
+| +|+.+.. ..||.|+.|+ .|||..|++ +...|.+.|+||. |.
T Consensus 28 yC-iC~~~~~-g~MI~CD~c~C~~eWfH~~CVg--l~~~p~~~W~Cp~cC~ 74 (90)
T 2jmi_A 28 YC-FCRNVSY-GPMVACDNPACPFEWFHYGCVG--LKQAPKGKWYCSKDCK 74 (90)
T ss_dssp CS-TTTCCCS-SSEECCCSSSCSCSCEETTTSS--CSSCTTSCCCSSHHHH
T ss_pred EE-EeCCCCC-CCEEEecCCCCccccCcCccCC--CCcCCCCCccCChhhc
Confidence 45 6776544 3799999976 899999999 5667789999999 64
No 74
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=97.77 E-value=8e-06 Score=69.94 Aligned_cols=45 Identities=22% Similarity=0.551 Sum_probs=36.9
Q ss_pred cccccccCCCCCceeecCCCCCcccccccCCCCcCCCCCCccccCCC
Q 002926 201 ICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHT 247 (864)
Q Consensus 201 ~C~VCgk~gd~~~LL~Cd~C~raYH~~CL~Ppl~svP~g~W~CP~C~ 247 (864)
+| +|+.+.+...||.|+.|..|||..|++.....++ ..|+|+.|.
T Consensus 21 ~C-iC~~~~~~~~MIqCd~C~~WfH~~Cvgi~~~~~~-~~~~C~~C~ 65 (68)
T 3o70_A 21 TC-FCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVP-EVFVCQKCR 65 (68)
T ss_dssp CS-TTCCCCTTCCEEECTTTCCEEETTTTTCCTTSCC-SSCCCHHHH
T ss_pred Ee-ECCCcCCCCCEEECCCCCccccccccCcCcccCC-CcEECCCCC
Confidence 45 8888776667999999999999999997655444 689999885
No 75
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=97.73 E-value=7.2e-06 Score=69.11 Aligned_cols=43 Identities=23% Similarity=0.685 Sum_probs=35.0
Q ss_pred cccccccCCCCCceeecCC--CC-CcccccccCCCCcCCCCCCccccCCC
Q 002926 201 ICEICRRTGDPNKFMFCRR--CD-AAYHCYCQHPPHKNVSSGPYLCPKHT 247 (864)
Q Consensus 201 ~C~VCgk~gd~~~LL~Cd~--C~-raYH~~CL~Ppl~svP~g~W~CP~C~ 247 (864)
+| +|+++.. ..||.|+. |. .|||..|++ +...|.+.|+||.|.
T Consensus 13 yC-~C~~~~~-g~MI~CD~c~C~~~WfH~~Cvg--l~~~p~~~w~Cp~C~ 58 (62)
T 2g6q_A 13 YC-LCNQVSY-GEMIGCDNEQCPIEWFHFSCVS--LTYKPKGKWYCPKCR 58 (62)
T ss_dssp ET-TTTEECC-SEEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHH
T ss_pred EE-ECCCCCC-CCeeeeeCCCCCcccEecccCC--cCcCCCCCEECcCcc
Confidence 56 7887643 37999999 55 999999999 556678999999985
No 76
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=97.69 E-value=2.7e-05 Score=70.82 Aligned_cols=45 Identities=22% Similarity=0.617 Sum_probs=34.1
Q ss_pred cccccccccccCcccCCceeecCCCCccccccccccCccccccCCCCCcCCCCCc
Q 002926 146 MCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSCR 200 (864)
Q Consensus 146 ~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~~~~~v~~~~W~CpeCk 200 (864)
.| +|+...+. ..||.|+.|.++||..|++++.... + ..|+|+.|.
T Consensus 30 rC-iC~~~~~~-----~~mi~Cd~C~~w~H~~C~~~~~~~~---p-~~w~C~~C~ 74 (98)
T 2lv9_A 30 RC-ICGFTHDD-----GYMICCDKCSVWQHIDCMGIDRQHI---P-DTYLCERCQ 74 (98)
T ss_dssp CC-TTSCCSCS-----SCEEEBTTTCBEEETTTTTCCTTSC---C-SSBCCTTTS
T ss_pred Ee-ECCCccCC-----CcEEEcCCCCCcCcCcCCCCCccCC---C-CCEECCCCc
Confidence 46 67664422 3899999999999999999975432 2 479999983
No 77
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=97.68 E-value=6.4e-06 Score=66.71 Aligned_cols=46 Identities=33% Similarity=0.962 Sum_probs=35.1
Q ss_pred ccccccccccCCCCCCceeccCCCCccccccCCCChHHHhhhccCCCCceeCCCCCC
Q 002926 284 YCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRG 340 (864)
Q Consensus 284 yCpVC~K~Y~D~dg~~MVqCD~C~~WfH~eCd~l~dE~y~~~gid~~~~Y~CptCr~ 340 (864)
|| +|.+.+. +..||+||.|..|||..|+++..+. . ...|+|+.|+.
T Consensus 6 ~C-~C~~~~~---~~~MI~Cd~C~~W~H~~Cvgi~~~~-----~--~~~~~C~~C~~ 51 (52)
T 3o7a_A 6 TC-FCMKPFA---GRPMIECNECHTWIHLSCAKIRKSN-----V--PEVFVCQKCRD 51 (52)
T ss_dssp CS-TTCCBCT---TCCEEECTTTCCEEETTTTTCCGGG-----C--CSSCCCHHHHT
T ss_pred EE-EeCCcCC---CCCEEEcCCCCccccccccCCCccc-----C--CCcEECcCCCC
Confidence 44 5776543 5689999999999999999987542 1 24899999963
No 78
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=97.64 E-value=1.7e-05 Score=68.15 Aligned_cols=46 Identities=20% Similarity=0.498 Sum_probs=36.0
Q ss_pred cccccccCCCCC-ceeecCCCCCcccccccCCCCcCCCCCCccccCCC
Q 002926 201 ICEICRRTGDPN-KFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHT 247 (864)
Q Consensus 201 ~C~VCgk~gd~~-~LL~Cd~C~raYH~~CL~Ppl~svP~g~W~CP~C~ 247 (864)
+| +|+.+.++. .||.|+.|..|||..|++..........|+|+.|.
T Consensus 18 ~C-~C~~~~~~g~~mI~Cd~C~~W~H~~Cvg~~~~~~~~~~~~C~~C~ 64 (72)
T 1wee_A 18 DC-KCGTKDDDGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCI 64 (72)
T ss_dssp CC-TTCCCSCCSSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCHHHH
T ss_pred Ee-eCCCccCCCCcEEECCCCCCccCCeeeccCccccCCCcEECCCcc
Confidence 45 688876544 69999999999999999975433335789999985
No 79
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=97.64 E-value=1.3e-05 Score=67.08 Aligned_cols=47 Identities=19% Similarity=0.521 Sum_probs=36.1
Q ss_pred cccccccCCC-CCceeecCCCCCcccccccCCCCcCCC-CCCccccCCC
Q 002926 201 ICEICRRTGD-PNKFMFCRRCDAAYHCYCQHPPHKNVS-SGPYLCPKHT 247 (864)
Q Consensus 201 ~C~VCgk~gd-~~~LL~Cd~C~raYH~~CL~Ppl~svP-~g~W~CP~C~ 247 (864)
+|.+|+++.+ ...||.|+.|..|||..|++....... ...|+|+.|.
T Consensus 8 ~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~ 56 (64)
T 1we9_A 8 QCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCS 56 (64)
T ss_dssp CCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHH
T ss_pred CCCCCCCccCCCCCEEEccCCCCCCCccccCcChhHhcCCCcEECCCCc
Confidence 4557777754 347999999999999999996544333 3689999985
No 80
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=97.56 E-value=1.5e-05 Score=76.37 Aligned_cols=52 Identities=21% Similarity=0.641 Sum_probs=41.2
Q ss_pred CcccccccccccccccCcccCCceeecCCCCccccccccccCcccc---cc-CCCCCcCCCCCc
Q 002926 141 SNTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNR---DL-FHWSSWKCPSCR 200 (864)
Q Consensus 141 s~~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~~~---~~-v~~~~W~CpeCk 200 (864)
..++++|.+|..+| +|++|+.|+++||..|+.++..+. .+ .+.+.|.|..|.
T Consensus 54 Dg~~~~C~vC~dGG--------~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~ 109 (129)
T 3ql9_A 54 DGMDEQCRWCAEGG--------NLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICH 109 (129)
T ss_dssp TSCBSSCTTTCCCS--------EEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTC
T ss_pred CCCCCcCeecCCCC--------eeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcC
Confidence 45677999999988 999999999999999999763211 11 146899999983
No 81
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=97.54 E-value=2.1e-05 Score=65.56 Aligned_cols=45 Identities=27% Similarity=0.750 Sum_probs=34.9
Q ss_pred ccccccccccccccCcccCCceeecCC--CC-ccccccccccCccccccCCCCCcCCCCC
Q 002926 143 TNVMCRLCFVGENEGCERARRMLSCKS--CG-KKYHRNCLKNWAQNRDLFHWSSWKCPSC 199 (864)
Q Consensus 143 ~dd~C~vC~~gG~~gs~~~eeLL~Cd~--C~-raYH~~CL~p~~~~~~~v~~~~W~CpeC 199 (864)
...+| +|+.... .+||.|+. |. .+||..|+++... +.+.|+|+.|
T Consensus 8 e~~yC-~C~~~~~------g~mi~CD~~~C~~~wfH~~Cvgl~~~-----p~~~w~Cp~C 55 (59)
T 3c6w_A 8 EPTYC-LCHQVSY------GEMIGCDNPDCPIEWFHFACVDLTTK-----PKGKWFCPRC 55 (59)
T ss_dssp CCEET-TTTEECC------SEEEECSCTTCSSCEEETGGGTCSSC-----CSSCCCCHHH
T ss_pred CCcEE-ECCCCCC------CCeeEeeCCCCCCCCEecccCCcccC-----CCCCEECcCc
Confidence 44578 8987431 28999999 88 6999999997543 3478999988
No 82
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=97.53 E-value=2.2e-05 Score=66.10 Aligned_cols=45 Identities=27% Similarity=0.725 Sum_probs=35.1
Q ss_pred ccccccccccccccCcccCCceeecCC--CC-ccccccccccCccccccCCCCCcCCCCC
Q 002926 143 TNVMCRLCFVGENEGCERARRMLSCKS--CG-KKYHRNCLKNWAQNRDLFHWSSWKCPSC 199 (864)
Q Consensus 143 ~dd~C~vC~~gG~~gs~~~eeLL~Cd~--C~-raYH~~CL~p~~~~~~~v~~~~W~CpeC 199 (864)
...+| +|..... .+||.|+. |+ .+||+.|+++... +.+.|+|+.|
T Consensus 10 e~~yC-~C~~~~~------g~MI~CD~c~C~~~WfH~~Cvgl~~~-----p~~~w~Cp~C 57 (62)
T 2g6q_A 10 EPTYC-LCNQVSY------GEMIGCDNEQCPIEWFHFSCVSLTYK-----PKGKWYCPKC 57 (62)
T ss_dssp CCEET-TTTEECC------SEEEECSCTTCSSCEEETGGGTCSSC-----CSSCCCCHHH
T ss_pred CCcEE-ECCCCCC------CCeeeeeCCCCCcccEecccCCcCcC-----CCCCEECcCc
Confidence 44588 8987431 28999999 66 9999999998543 3579999988
No 83
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=97.53 E-value=2.3e-05 Score=65.52 Aligned_cols=45 Identities=27% Similarity=0.767 Sum_probs=34.7
Q ss_pred ccccccccccccccCcccCCceeecCC--CC-ccccccccccCccccccCCCCCcCCCCC
Q 002926 143 TNVMCRLCFVGENEGCERARRMLSCKS--CG-KKYHRNCLKNWAQNRDLFHWSSWKCPSC 199 (864)
Q Consensus 143 ~dd~C~vC~~gG~~gs~~~eeLL~Cd~--C~-raYH~~CL~p~~~~~~~v~~~~W~CpeC 199 (864)
...+| +|+.... ..||.|+. |. .+||+.|+++... +.+.|+|+.|
T Consensus 9 e~~~C-~C~~~~~------g~mi~CD~cdC~~~wfH~~Cvgl~~~-----p~g~w~C~~C 56 (60)
T 2vnf_A 9 EPTYC-LCHQVSY------GEMIGCDNPDCSIEWFHFACVGLTTK-----PRGKWFCPRC 56 (60)
T ss_dssp CCEET-TTTEECC------SEEEECSCTTCSSCEEETGGGTCSSC-----CSSCCCCHHH
T ss_pred CCCEE-ECCCcCC------CCEEEeCCCCCCCceEehhcCCCCcC-----CCCCEECcCc
Confidence 34578 8987531 28999999 76 8999999997443 3588999988
No 84
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=97.51 E-value=8.2e-06 Score=78.12 Aligned_cols=44 Identities=18% Similarity=0.508 Sum_probs=37.9
Q ss_pred cccccccCCCCCceeecCCCCCcccccccCCCCc-----CC--CCCCccccCCC
Q 002926 201 ICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHK-----NV--SSGPYLCPKHT 247 (864)
Q Consensus 201 ~C~VCgk~gd~~~LL~Cd~C~raYH~~CL~Ppl~-----sv--P~g~W~CP~C~ 247 (864)
+|.+|+.+| .++.|+.|+++||..|+.|++. .+ +.+.|.|+.|.
T Consensus 59 ~C~vC~dGG---~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~ 109 (129)
T 3ql9_A 59 QCRWCAEGG---NLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICH 109 (129)
T ss_dssp SCTTTCCCS---EEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTC
T ss_pred cCeecCCCC---eeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcC
Confidence 788888887 8999999999999999998742 33 78999999985
No 85
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.50 E-value=2e-05 Score=67.91 Aligned_cols=43 Identities=26% Similarity=0.638 Sum_probs=34.1
Q ss_pred cccccccCCCCCceeecCCCC---CcccccccCCCCcCCCCCCccccCCC
Q 002926 201 ICEICRRTGDPNKFMFCRRCD---AAYHCYCQHPPHKNVSSGPYLCPKHT 247 (864)
Q Consensus 201 ~C~VCgk~gd~~~LL~Cd~C~---raYH~~CL~Ppl~svP~g~W~CP~C~ 247 (864)
+| +|+.... ..||.|+.|+ .|||..|+. +...|.+.|+||.|.
T Consensus 8 yC-~C~~~~~-g~MI~CD~cdC~~~WfH~~Cvg--l~~~p~~~w~Cp~C~ 53 (70)
T 1x4i_A 8 YC-ICNQVSY-GEMVGCDNQDCPIEWFHYGCVG--LTEAPKGKWYCPQCT 53 (70)
T ss_dssp CS-TTSCCCC-SSEECCSCTTCSCCCEEHHHHT--CSSCCSSCCCCHHHH
T ss_pred EE-EcCCCCC-CCEeEeCCCCCCccCCcccccc--cCcCCCCCEECCCCC
Confidence 44 4776643 3899999975 899999999 455678999999985
No 86
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=97.47 E-value=2.5e-05 Score=63.35 Aligned_cols=47 Identities=19% Similarity=0.497 Sum_probs=35.5
Q ss_pred cccccccCCCC-CceeecC-CCCCcccccccCCCCcCCCCCCccccCCC
Q 002926 201 ICEICRRTGDP-NKFMFCR-RCDAAYHCYCQHPPHKNVSSGPYLCPKHT 247 (864)
Q Consensus 201 ~C~VCgk~gd~-~~LL~Cd-~C~raYH~~CL~Ppl~svP~g~W~CP~C~ 247 (864)
.|.+|+++.++ ..|+.|+ .|..|||..|++..........|+|+.|.
T Consensus 4 ~cc~C~~p~~~~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~~~~~~C~~C~ 52 (52)
T 2kgg_A 4 AAQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCA 52 (52)
T ss_dssp SCTTCCCCCCTTCCEEECTTTTCCEEETTTTTCCHHHHHHSCCCCSCC-
T ss_pred cCCCCcCccCCCCcEEEeCCCCCccCcccccCCCccccCCCCEECCCCC
Confidence 44589988753 4699999 99999999999964333224789999973
No 87
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=97.43 E-value=4.8e-05 Score=68.71 Aligned_cols=45 Identities=22% Similarity=0.585 Sum_probs=34.5
Q ss_pred ccccccccccccccCcccCCceeecCCCC---ccccccccccCccccccCCCCCcCCCC-C
Q 002926 143 TNVMCRLCFVGENEGCERARRMLSCKSCG---KKYHRNCLKNWAQNRDLFHWSSWKCPS-C 199 (864)
Q Consensus 143 ~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~---raYH~~CL~p~~~~~~~v~~~~W~Cpe-C 199 (864)
...+| +|..... .+||.||.|. .+||+.|+++... +.+.|+|+. |
T Consensus 25 ~~~yC-iC~~~~~------g~MI~CD~c~C~~eWfH~~CVgl~~~-----p~~~W~Cp~cC 73 (90)
T 2jmi_A 25 EEVYC-FCRNVSY------GPMVACDNPACPFEWFHYGCVGLKQA-----PKGKWYCSKDC 73 (90)
T ss_dssp CSCCS-TTTCCCS------SSEECCCSSSCSCSCEETTTSSCSSC-----TTSCCCSSHHH
T ss_pred CCcEE-EeCCCCC------CCEEEecCCCCccccCcCccCCCCcC-----CCCCccCChhh
Confidence 44588 8986431 2799999965 8999999998543 347999998 6
No 88
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=97.42 E-value=2.9e-05 Score=67.81 Aligned_cols=47 Identities=23% Similarity=0.580 Sum_probs=36.2
Q ss_pred cccccccCCC-CCceeecCCCCCcccccccCCCCcCC-CCCCccccCCCc
Q 002926 201 ICEICRRTGD-PNKFMFCRRCDAAYHCYCQHPPHKNV-SSGPYLCPKHTK 248 (864)
Q Consensus 201 ~C~VCgk~gd-~~~LL~Cd~C~raYH~~CL~Ppl~sv-P~g~W~CP~C~~ 248 (864)
+| +|+.+.+ ...||+|+.|..|||..|++...... ....|+|+.|..
T Consensus 14 ~C-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~ 62 (79)
T 1wep_A 14 YC-LCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEA 62 (79)
T ss_dssp CS-TTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTT
T ss_pred EE-EcCCccCCCCceEEcCCCCCcEEeeecCcccccccCCCeEECCCccc
Confidence 45 8888765 45799999999999999999544332 236899999863
No 89
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=97.42 E-value=1.3e-05 Score=69.35 Aligned_cols=46 Identities=28% Similarity=0.728 Sum_probs=36.0
Q ss_pred cccccccCCCCCceeecCCCCCcccccccCCCCcCC-----CCCCccccCCC
Q 002926 201 ICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNV-----SSGPYLCPKHT 247 (864)
Q Consensus 201 ~C~VCgk~gd~~~LL~Cd~C~raYH~~CL~Ppl~sv-----P~g~W~CP~C~ 247 (864)
+| +|+.+.+...||.|+.|..|||..|++...... ....|+|+.|.
T Consensus 18 ~C-~C~~~~~~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~ 68 (76)
T 1wem_A 18 YC-ICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCT 68 (76)
T ss_dssp CS-TTCCCCCSSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHH
T ss_pred EE-ECCCccCCCCEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCc
Confidence 45 788887656899999999999999999643321 34689999985
No 90
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=97.38 E-value=6.2e-05 Score=60.91 Aligned_cols=43 Identities=21% Similarity=0.492 Sum_probs=35.8
Q ss_pred ccccCCCCCceeecCCCCCcccccccCCCCcCCCCCCccccCCC
Q 002926 204 ICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHT 247 (864)
Q Consensus 204 VCgk~gd~~~LL~Cd~C~raYH~~CL~Ppl~svP~g~W~CP~C~ 247 (864)
+|+.+.+...||.|+.|..|||..|++.....++ ..|+|+.|.
T Consensus 8 ~C~~~~~~~~MI~Cd~C~~W~H~~Cvgi~~~~~~-~~~~C~~C~ 50 (52)
T 3o7a_A 8 FCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVP-EVFVCQKCR 50 (52)
T ss_dssp TTCCBCTTCCEEECTTTCCEEETTTTTCCGGGCC-SSCCCHHHH
T ss_pred EeCCcCCCCCEEEcCCCCccccccccCCCcccCC-CcEECcCCC
Confidence 8888877668999999999999999997654444 689999874
No 91
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=97.32 E-value=3.2e-05 Score=66.97 Aligned_cols=47 Identities=26% Similarity=0.600 Sum_probs=36.3
Q ss_pred cccccccCCC-CCceeecCCCCCcccccccCCCCcCCC-CCCccccCCCc
Q 002926 201 ICEICRRTGD-PNKFMFCRRCDAAYHCYCQHPPHKNVS-SGPYLCPKHTK 248 (864)
Q Consensus 201 ~C~VCgk~gd-~~~LL~Cd~C~raYH~~CL~Ppl~svP-~g~W~CP~C~~ 248 (864)
+| +|+.+.+ ...||.|+.|..|||..|++......+ ...|+|+.|..
T Consensus 12 yC-iC~~~~~~~~~MI~Cd~C~~WfH~~Cvg~~~~~~~~~~~~~C~~C~~ 60 (75)
T 3kqi_A 12 YC-VCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEK 60 (75)
T ss_dssp ET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCTTTGGGBSSCCCHHHHH
T ss_pred EE-ECCCcCCCCCCEEEcCCCCCCEecccccccccccCCCCEEECCCCcc
Confidence 44 8888754 457999999999999999996544433 36799999863
No 92
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=97.29 E-value=6.2e-05 Score=65.70 Aligned_cols=46 Identities=22% Similarity=0.554 Sum_probs=35.6
Q ss_pred cccccccCCCCCceeecC--CCCCcccccccCCCCcC-----CCCCCccccCCC
Q 002926 201 ICEICRRTGDPNKFMFCR--RCDAAYHCYCQHPPHKN-----VSSGPYLCPKHT 247 (864)
Q Consensus 201 ~C~VCgk~gd~~~LL~Cd--~C~raYH~~CL~Ppl~s-----vP~g~W~CP~C~ 247 (864)
+| +|+...+...||.|+ .|..|||..|++..... .....|+|+.|.
T Consensus 18 ~C-iC~~~~~~g~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~ 70 (78)
T 1wew_A 18 RC-VCGNSLETDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICR 70 (78)
T ss_dssp CC-SSCCCCCCSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHH
T ss_pred Ee-ECCCcCCCCCEEEECCccCCccccCEEEccccccccccccCCCCEECCCCC
Confidence 45 788875556899999 99999999999954332 123689999985
No 93
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=97.24 E-value=5.4e-05 Score=69.79 Aligned_cols=48 Identities=21% Similarity=0.497 Sum_probs=36.6
Q ss_pred cccccccCCCC-CceeecC-CCCCcccccccCCCCcC------CCCCCccccCCCc
Q 002926 201 ICEICRRTGDP-NKFMFCR-RCDAAYHCYCQHPPHKN------VSSGPYLCPKHTK 248 (864)
Q Consensus 201 ~C~VCgk~gd~-~~LL~Cd-~C~raYH~~CL~Ppl~s------vP~g~W~CP~C~~ 248 (864)
.|.+|+++.++ ..|+.|+ .|..|||..|++..... .|...|+||.|..
T Consensus 5 ~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~ 60 (105)
T 2xb1_A 5 PCGACRSEVNDDQDAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCLK 60 (105)
T ss_dssp BCTTTCSBCCTTSCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHH
T ss_pred CCCCCCCccCCCCCEEEecCCcccccccccCCcCHHHHHhhccCCCCCEECccccC
Confidence 56788887433 4799998 99999999999954321 3567899999863
No 94
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=97.23 E-value=2.4e-05 Score=66.57 Aligned_cols=47 Identities=19% Similarity=0.499 Sum_probs=36.1
Q ss_pred cccccccCCCC-CceeecC-CCCCcccccccCCCCcC------CCCCCccccCCC
Q 002926 201 ICEICRRTGDP-NKFMFCR-RCDAAYHCYCQHPPHKN------VSSGPYLCPKHT 247 (864)
Q Consensus 201 ~C~VCgk~gd~-~~LL~Cd-~C~raYH~~CL~Ppl~s------vP~g~W~CP~C~ 247 (864)
.|.+|+++.++ ..|+.|+ .|..|||..|++..... .|...|+|+.|.
T Consensus 10 ~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cvglt~~~~~~l~~e~~~~w~C~~C~ 64 (65)
T 2vpb_A 10 PCGICTNEVNDDQDAILCEASCQKWFHRICTGMTETAYGLLTAEASAVWGCDTCM 64 (65)
T ss_dssp BCTTTCSBCCTTSCEEEBTTTTCCEEEHHHHTCCHHHHHHHHHCTTEEECCHHHH
T ss_pred cCccCCCccCCCCCeEecccCccccCchhccCCCHHHHHHhhccCCCcEECcCcc
Confidence 56678887543 4799999 99999999999954321 366789999874
No 95
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=97.22 E-value=4.1e-05 Score=87.16 Aligned_cols=50 Identities=34% Similarity=0.905 Sum_probs=38.5
Q ss_pred cccccccccccCCCCCCceeccCCCCccccccCCCChHHHhhhccCCCCceeCCCCCC
Q 002926 283 NYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRG 340 (864)
Q Consensus 283 nyCpVC~K~Y~D~dg~~MVqCD~C~~WfH~eCd~l~dE~y~~~gid~~~~Y~CptCr~ 340 (864)
.|| +|.+.|.+ ++.||+||.|+.|||..|+++..+.... ...|+|+.|+.
T Consensus 38 ~yC-~C~~~~d~--~~~MIqCd~C~~WfH~~Cvgl~~~~~~~-----~~~~~C~~C~~ 87 (488)
T 3kv5_D 38 VYC-VCRQPYDV--NRFMIECDICKDWFHGSCVGVEEHHAVD-----IDLYHCPNCAV 87 (488)
T ss_dssp EET-TTTEECCT--TSCEEEBTTTCCEEEHHHHTCCGGGGGG-----EEEBCCHHHHH
T ss_pred eEE-eCCCcCCC--CCCeEEccCCCCceeeeecCcCcccccC-----CCEEECCCCcC
Confidence 467 89887743 4679999999999999999987553221 23799999984
No 96
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=97.20 E-value=3.4e-05 Score=75.73 Aligned_cols=46 Identities=28% Similarity=0.696 Sum_probs=35.6
Q ss_pred cccccccCCC-CCceeecCCCCCcccccccCCCCcC-CCCCCccccCCC
Q 002926 201 ICEICRRTGD-PNKFMFCRRCDAAYHCYCQHPPHKN-VSSGPYLCPKHT 247 (864)
Q Consensus 201 ~C~VCgk~gd-~~~LL~Cd~C~raYH~~CL~Ppl~s-vP~g~W~CP~C~ 247 (864)
+| +|+.+++ ...|+.|+.|..|||..|++..... ...+.|+|+.|.
T Consensus 10 ~C-~C~~~~~~~~~mi~Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~ 57 (174)
T 2ri7_A 10 YC-ICKTPEDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQ 57 (174)
T ss_dssp ET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHH
T ss_pred Ee-eCCCCCCCCCCEeECCCCCchhChhhcCCchhhccCccCeecCCCc
Confidence 56 7787754 3469999999999999999854332 235789999986
No 97
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=97.19 E-value=0.00013 Score=62.17 Aligned_cols=44 Identities=25% Similarity=0.471 Sum_probs=33.3
Q ss_pred ccccCCCCCceeecC--CCCCcccccccCCCCcCC----CCCCccccCCC
Q 002926 204 ICRRTGDPNKFMFCR--RCDAAYHCYCQHPPHKNV----SSGPYLCPKHT 247 (864)
Q Consensus 204 VCgk~gd~~~LL~Cd--~C~raYH~~CL~Ppl~sv----P~g~W~CP~C~ 247 (864)
+|+...+...||.|+ .|..|||..|++...... ....|+|+.|.
T Consensus 14 ~C~~~~~~g~mI~CD~~~C~~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr 63 (68)
T 2rsd_A 14 ICSSTMVNDSMIQCEDQRCQVWQHLNCVLIPDKPGESAEVPPVFYCELCR 63 (68)
T ss_dssp TTCCCSCCSCEEECSCTTTCEEEETTTSCCCSSTTSCCCCCSSCCCHHHH
T ss_pred ECCCCcCCCCEEEECCCCCCCeEchhhCCCCcccccccCCCCcEECcCcc
Confidence 788776667899999 599999999998533221 12479999885
No 98
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.19 E-value=5.7e-05 Score=65.05 Aligned_cols=45 Identities=33% Similarity=0.885 Sum_probs=34.0
Q ss_pred cccccccccccCCCCCCceeccCCC---CccccccCCCChHHHhhhccCCCCceeCCCCCC
Q 002926 283 NYCPVCLKVYRDSESTPMVCCDVCQ---RWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRG 340 (864)
Q Consensus 283 nyCpVC~K~Y~D~dg~~MVqCD~C~---~WfH~eCd~l~dE~y~~~gid~~~~Y~CptCr~ 340 (864)
.|| +|.+.+ .+.||+||.|+ .|||..|+++.. .+...|+|+.|..
T Consensus 7 ~yC-~C~~~~----~g~MI~CD~cdC~~~WfH~~Cvgl~~--------~p~~~w~Cp~C~~ 54 (70)
T 1x4i_A 7 GYC-ICNQVS----YGEMVGCDNQDCPIEWFHYGCVGLTE--------APKGKWYCPQCTA 54 (70)
T ss_dssp CCS-TTSCCC----CSSEECCSCTTCSCCCEEHHHHTCSS--------CCSSCCCCHHHHH
T ss_pred eEE-EcCCCC----CCCEeEeCCCCCCccCCcccccccCc--------CCCCCEECCCCCc
Confidence 466 477653 23799999975 899999999753 2456899999973
No 99
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=97.16 E-value=5.1e-05 Score=85.57 Aligned_cols=49 Identities=39% Similarity=0.937 Sum_probs=38.3
Q ss_pred ccccccccccCCCCCCceeccCCCCccccccCCCChHHHhhhccCCCCceeCCCCCC
Q 002926 284 YCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRG 340 (864)
Q Consensus 284 yCpVC~K~Y~D~dg~~MVqCD~C~~WfH~eCd~l~dE~y~~~gid~~~~Y~CptCr~ 340 (864)
|| +|.+.|. +++.||+||.|+.|||..|+++..+.... ...|+|+.|+.
T Consensus 7 yC-iC~~~~d--~~~~MIqCD~C~~WfH~~CVgi~~~~~~~-----~~~y~C~~C~~ 55 (447)
T 3kv4_A 7 YC-LCRLPYD--VTRFMIECDMCQDWFHGSCVGVEEEKAAD-----IDLYHCPNCEV 55 (447)
T ss_dssp ET-TTTEECC--TTSCEEECTTTCCEEEHHHHTCCHHHHTT-----EEECCCHHHHH
T ss_pred EE-eCCCcCC--CCCCeEEcCCCCcccccccCCcCcccccC-----CCEEECCCCcc
Confidence 45 7888773 35679999999999999999987654321 24799999985
No 100
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=97.06 E-value=0.0002 Score=65.87 Aligned_cols=42 Identities=36% Similarity=0.912 Sum_probs=33.7
Q ss_pred CceeccCCCCccccccCCCChHHHhhhcc-CCCCceeCCCCCC
Q 002926 299 PMVCCDVCQRWVHCQCDGISDEKYLQFQV-DGNLQYRCPTCRG 340 (864)
Q Consensus 299 ~MVqCD~C~~WfH~eCd~l~dE~y~~~gi-d~~~~Y~CptCr~ 340 (864)
.||+||.|..|||..|.++.++.+..+.. +....|.|+.|..
T Consensus 1 ~mi~c~~c~~w~H~~c~~~~~~~~~~l~~lp~~~~~~c~~C~~ 43 (140)
T 2ku7_A 1 SMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTE 43 (140)
T ss_dssp CCCCCSCCSSCHHHHHCCCCHHHHHHHHSSCTTTTCCSSCCTT
T ss_pred CccccccCCCccCCcccccCHHHHHHHhhccccceeeCccccc
Confidence 48999999999999999987765555543 3356899999974
No 101
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=97.01 E-value=0.00033 Score=62.59 Aligned_cols=54 Identities=24% Similarity=0.678 Sum_probs=40.1
Q ss_pred CCcccccccccccccccCcccCCceeecCCCCccccccccccCc--------ccc-ccCCCCCcCCCCC
Q 002926 140 QSNTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWA--------QNR-DLFHWSSWKCPSC 199 (864)
Q Consensus 140 ~s~~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~--------~~~-~~v~~~~W~CpeC 199 (864)
...++++|.+|..-. .++|+.|..|++.||..||.... +.. .+.+...|.|+.|
T Consensus 11 ~~~~D~~C~VC~~~t------~~~l~pCRvC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~C 73 (89)
T 1wil_A 11 PVVNDEMCDVCEVWT------AESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYC 73 (89)
T ss_dssp CCCCSCCCTTTCCCC------SSCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTT
T ss_pred CCCCCcccCcccccc------ccceeccccccccccHhhcccccccccHHHHHHHHccCCCCCcccccc
Confidence 345889999999644 23899999999999999997641 111 1124579999998
No 102
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=96.94 E-value=0.00036 Score=59.39 Aligned_cols=53 Identities=23% Similarity=0.451 Sum_probs=36.1
Q ss_pred cccccccccccccccCcccCCceeecCC--CCccccccccccCccccccC-CCCCcCCCCCc
Q 002926 142 NTNVMCRLCFVGENEGCERARRMLSCKS--CGKKYHRNCLKNWAQNRDLF-HWSSWKCPSCR 200 (864)
Q Consensus 142 ~~dd~C~vC~~gG~~gs~~~eeLL~Cd~--C~raYH~~CL~p~~~~~~~v-~~~~W~CpeCk 200 (864)
.....| +|+.... ...||.|+. |..+||..|+++...+.... ....|+|+.|+
T Consensus 8 e~~v~C-~C~~~~~-----~g~mI~CD~~~C~~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr 63 (68)
T 2rsd_A 8 EAKVRC-ICSSTMV-----NDSMIQCEDQRCQVWQHLNCVLIPDKPGESAEVPPVFYCELCR 63 (68)
T ss_dssp SCEECC-TTCCCSC-----CSCEEECSCTTTCEEEETTTSCCCSSTTSCCCCCSSCCCHHHH
T ss_pred CCCEEe-ECCCCcC-----CCCEEEECCCCCCCeEchhhCCCCcccccccCCCCcEECcCcc
Confidence 344578 7976432 238999994 99999999999865432211 12479998874
No 103
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=96.92 E-value=0.00043 Score=79.21 Aligned_cols=42 Identities=29% Similarity=0.777 Sum_probs=33.5
Q ss_pred CCCCCCceeccCCCCccccccCCCChHHHhhhccCCCCceeCCCCCC
Q 002926 294 DSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRG 340 (864)
Q Consensus 294 D~dg~~MVqCD~C~~WfH~eCd~l~dE~y~~~gid~~~~Y~CptCr~ 340 (864)
.+.+..||+||.|..|||..|++++.+.... ...|+|+.|..
T Consensus 52 ~n~~~~mI~CD~C~~WfH~~CVgi~~~~a~~-----~~~y~Cp~C~~ 93 (528)
T 3pur_A 52 KKNDFQWIGCDSCQTWYHFLCSGLEQFEYYL-----YEKFFCPKCVP 93 (528)
T ss_dssp TTSTTSEEECTTTCCEEEGGGTTCCGGGTTT-----EEECCCTTTHH
T ss_pred CCcCCCEEECCCCCcCCCCcCCCCChhHhcC-----CCeEECcCCcC
Confidence 3456689999999999999999987654322 24899999985
No 104
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=96.86 E-value=0.00045 Score=60.24 Aligned_cols=54 Identities=24% Similarity=0.417 Sum_probs=38.4
Q ss_pred CcccccccccccccccCcccCCceeecC--CCCccccccccccCcccccc--CCCCCcCCCCCc
Q 002926 141 SNTNVMCRLCFVGENEGCERARRMLSCK--SCGKKYHRNCLKNWAQNRDL--FHWSSWKCPSCR 200 (864)
Q Consensus 141 s~~dd~C~vC~~gG~~gs~~~eeLL~Cd--~C~raYH~~CL~p~~~~~~~--v~~~~W~CpeCk 200 (864)
.....+| +|+.... ...||.|+ .|..+||..|+++....... .....|+|+.|.
T Consensus 13 ~~~~~~C-iC~~~~~-----~g~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~ 70 (78)
T 1wew_A 13 PEIKVRC-VCGNSLE-----TDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICR 70 (78)
T ss_dssp CCCCCCC-SSCCCCC-----CSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHH
T ss_pred CCCCEEe-ECCCcCC-----CCCEEEECCccCCccccCEEEccccccccccccCCCCEECCCCC
Confidence 3455688 7987632 23899999 99999999999997653210 113689998873
No 105
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=96.73 E-value=0.00026 Score=71.32 Aligned_cols=47 Identities=32% Similarity=0.727 Sum_probs=34.9
Q ss_pred cccccccCCCCC----ceeecCCCCCcccccccCCCCc------CCC-CCCccccCCC
Q 002926 201 ICEICRRTGDPN----KFMFCRRCDAAYHCYCQHPPHK------NVS-SGPYLCPKHT 247 (864)
Q Consensus 201 ~C~VCgk~gd~~----~LL~Cd~C~raYH~~CL~Ppl~------svP-~g~W~CP~C~ 247 (864)
+|.+|+++.+++ .||.|+.|..|||..|++.... ..| ...|+||.|.
T Consensus 4 ~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~ 61 (183)
T 3lqh_A 4 FCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCT 61 (183)
T ss_dssp BCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTC
T ss_pred cCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCC
Confidence 567777765554 3999999999999999996431 112 2479999986
No 106
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=96.45 E-value=0.0011 Score=66.51 Aligned_cols=48 Identities=17% Similarity=0.468 Sum_probs=35.3
Q ss_pred cCCCCCCceeccCCCCccccccCCCChHHHhhhccCCCCceeCCCCCCCC
Q 002926 293 RDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGEC 342 (864)
Q Consensus 293 ~D~dg~~MVqCD~C~~WfH~eCd~l~dE~y~~~gid~~~~Y~CptCr~~~ 342 (864)
...++..||+|..|.+|||..|+...... .+..+..+.|.|..|....
T Consensus 13 ~~~~~~~mLqC~~C~qWFH~~Cl~~~~~~--~lp~~~fY~F~C~~C~~~g 60 (177)
T 3rsn_A 13 GRQLGEVELQCGICTKWFTADTFGIDTSS--CLPFMTNYSFHCNVCHHSG 60 (177)
T ss_dssp TCCTTSCEEECTTTCCEEEGGGGTCCCTT--CCTTCCSEEEECTTTSTTS
T ss_pred CCCCCceeEeeccccceecHHHhcccccC--ccccceeEEEEccccCCCC
Confidence 34567889999999999999999843211 1223467899999998743
No 107
>2equ_A PHD finger protein 20-like 1; tudor domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.10 E-value=0.01 Score=51.72 Aligned_cols=56 Identities=16% Similarity=0.261 Sum_probs=47.6
Q ss_pred ccccceEEEEecCCCceeeeeeEEeec-CeeEEEEEecCCcccceecCceeeEeeecccccc
Q 002926 802 DAIGKRVEVHQQSDNSWHKGVVTDTVE-GTSTLSITLDDSRVKTLELGKQGVRFVPQKQKRS 862 (864)
Q Consensus 802 da~~krvev~~~sd~~w~~g~v~~~~~-~~~~~~v~~d~~~~~~~~~gk~~vr~~~~~~k~~ 862 (864)
=.+|-+|.-.++ ||.|+.++|+.|.. |+ ..|.|+|+..++|.+- .||-||..+|+.
T Consensus 10 ~kvGd~clA~ws-Dg~~Y~A~I~~v~~~~~--~~V~f~Dyn~e~v~~~--~lrplp~~~k~~ 66 (74)
T 2equ_A 10 FKAGEEVLARWT-DCRYYPAKIEAINKEGT--FTVQFYDGVIRCLKRM--HIKAMPEDAKGQ 66 (74)
T ss_dssp CCTTCEEEEECS-SSSEEEEEEEEESTTSS--EEEEETTSCEEEECGG--GEECCCGGGTCC
T ss_pred CCCCCEEEEECC-CCCEEEEEEEEECCCCE--EEEEEecCCeEEecHH--HCeeCChhHhhc
Confidence 468999999996 99999999999976 55 9999999988888654 699999877754
No 108
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=96.04 E-value=0.0007 Score=77.13 Aligned_cols=47 Identities=23% Similarity=0.566 Sum_probs=35.6
Q ss_pred cccccccCCC-CCceeecCCCCCcccccccCCCCcCCC-CCCccccCCCc
Q 002926 201 ICEICRRTGD-PNKFMFCRRCDAAYHCYCQHPPHKNVS-SGPYLCPKHTK 248 (864)
Q Consensus 201 ~C~VCgk~gd-~~~LL~Cd~C~raYH~~CL~Ppl~svP-~g~W~CP~C~~ 248 (864)
+| +|+.+.+ ...|+.|+.|..|||..|++....... ...|+|+.|..
T Consensus 39 yC-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~ 87 (488)
T 3kv5_D 39 YC-VCRQPYDVNRFMIECDICKDWFHGSCVGVEEHHAVDIDLYHCPNCAV 87 (488)
T ss_dssp ET-TTTEECCTTSCEEEBTTTCCEEEHHHHTCCGGGGGGEEEBCCHHHHH
T ss_pred EE-eCCCcCCCCCCeEEccCCCCceeeeecCcCcccccCCCEEECCCCcC
Confidence 44 8888754 457999999999999999995443322 25799999863
No 109
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=96.00 E-value=0.0015 Score=58.38 Aligned_cols=46 Identities=17% Similarity=0.488 Sum_probs=34.5
Q ss_pred cccccccCCCCCceeecCCCCCcccccccCCC------------CcCCCCCCccccCCC
Q 002926 201 ICEICRRTGDPNKFMFCRRCDAAYHCYCQHPP------------HKNVSSGPYLCPKHT 247 (864)
Q Consensus 201 ~C~VCgk~gd~~~LL~Cd~C~raYH~~CL~Pp------------l~svP~g~W~CP~C~ 247 (864)
.|.||..-. .+.++.|..|.+.||..|+.+. +...+...|.|+.|-
T Consensus 17 ~C~VC~~~t-~~~l~pCRvC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~Ce 74 (89)
T 1wil_A 17 MCDVCEVWT-AESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCD 74 (89)
T ss_dssp CCTTTCCCC-SSCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTC
T ss_pred ccCcccccc-ccceeccccccccccHhhcccccccccHHHHHHHHccCCCCCccccccc
Confidence 677777433 2378999999999999999863 222356789999974
No 110
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=95.82 E-value=0.00077 Score=76.06 Aligned_cols=44 Identities=23% Similarity=0.534 Sum_probs=34.4
Q ss_pred ccccCCC-CCceeecCCCCCcccccccCCCCcCCC-CCCccccCCC
Q 002926 204 ICRRTGD-PNKFMFCRRCDAAYHCYCQHPPHKNVS-SGPYLCPKHT 247 (864)
Q Consensus 204 VCgk~gd-~~~LL~Cd~C~raYH~~CL~Ppl~svP-~g~W~CP~C~ 247 (864)
+|+.+.+ ...|+.|+.|..|||..|++....... ...|+|+.|.
T Consensus 9 iC~~~~d~~~~MIqCD~C~~WfH~~CVgi~~~~~~~~~~y~C~~C~ 54 (447)
T 3kv4_A 9 LCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCE 54 (447)
T ss_dssp TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTEEECCCHHHH
T ss_pred eCCCcCCCCCCeEEcCCCCcccccccCCcCcccccCCCEEECCCCc
Confidence 8888754 457999999999999999995433322 3679999985
No 111
>3qii_A PHD finger protein 20; tudor domain, structural genomics, structural GE consortium, SGC, transcription regulator; 2.30A {Homo sapiens}
Probab=95.62 E-value=0.016 Score=52.00 Aligned_cols=58 Identities=21% Similarity=0.164 Sum_probs=45.0
Q ss_pred HhccccccceEEEEecCCCceeeeeeEEeecCeeEEEEEecCCcccceecCceeeEeeeccc
Q 002926 798 KLGKDAIGKRVEVHQQSDNSWHKGVVTDTVEGTSTLSITLDDSRVKTLELGKQGVRFVPQKQ 859 (864)
Q Consensus 798 ~lg~da~~krvev~~~sd~~w~~g~v~~~~~~~~~~~v~~d~~~~~~~~~gk~~vr~~~~~~ 859 (864)
....-.+|.+|.-.| +|+.|+.++|+.|.+- .+..|.|+||..+||..- .||-+|..|
T Consensus 18 ~~~~f~vGd~VlArW-~D~~yYPAkI~sV~~~-~~YtV~F~DG~~etvk~~--~IKp~~~~~ 75 (85)
T 3qii_A 18 GSSEFQINEQVLACW-SDCRFYPAKVTAVNKD-GTYTVKFYDGVVQTVKHI--HVKAFSKDQ 75 (85)
T ss_dssp ---CCCTTCEEEEEC-TTSCEEEEEEEEECTT-SEEEEEETTSCEEEEEGG--GEEECC---
T ss_pred CCcccccCCEEEEEe-CCCCEeeEEEEEECCC-CeEEEEEeCCCeEEecHH--HcccCChhh
Confidence 345678999999999 9999999999999773 249999999999998864 467666655
No 112
>2g3r_A Tumor suppressor P53-binding protein 1; tandem tudor domains, cell cycle-transcription complex; 1.25A {Homo sapiens} SCOP: b.34.9.1 b.34.9.1 PDB: 2ig0_A* 3lgf_A* 3lgl_A* 3lh0_A* 1xni_A
Probab=95.52 E-value=0.012 Score=55.62 Aligned_cols=46 Identities=20% Similarity=0.247 Sum_probs=37.3
Q ss_pred ccccccceEEEEecCCCceeeeeeEEeecCeeEEEEEecCCccccee
Q 002926 800 GKDAIGKRVEVHQQSDNSWHKGVVTDTVEGTSTLSITLDDSRVKTLE 846 (864)
Q Consensus 800 g~da~~krvev~~~sd~~w~~g~v~~~~~~~~~~~v~~d~~~~~~~~ 846 (864)
|.+-||+||-..|++|+.|+-|+|+.+ .|-.++.|.||||..++|-
T Consensus 3 ~~~~~G~rV~AkWsdn~~yYpG~V~~~-~~~~ky~V~FdDg~~~~v~ 48 (123)
T 2g3r_A 3 MNSFVGLRVVAKWSSNGYFYSGKITRD-VGAGKYKLLFDDGYECDVL 48 (123)
T ss_dssp --CCTTCEEEEECTTTCCEEEEEEEEE-EETTEEEEEETTSCEEEEE
T ss_pred CccccceEEEEEeccCCcCcccEEEEe-ccCCeEEEEEcCCCeeEee
Confidence 678999999999976668999999775 3344699999999999874
No 113
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=95.34 E-value=0.0066 Score=69.65 Aligned_cols=37 Identities=24% Similarity=0.500 Sum_probs=29.8
Q ss_pred CceeecCCCCccccccccccCccccccCCCCCcCCCCCc
Q 002926 162 RRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSCR 200 (864)
Q Consensus 162 eeLL~Cd~C~raYH~~CL~p~~~~~~~v~~~~W~CpeCk 200 (864)
..||.||.|..+||..|++....... ....|.||.|.
T Consensus 56 ~~mI~CD~C~~WfH~~CVgi~~~~a~--~~~~y~Cp~C~ 92 (528)
T 3pur_A 56 FQWIGCDSCQTWYHFLCSGLEQFEYY--LYEKFFCPKCV 92 (528)
T ss_dssp TSEEECTTTCCEEEGGGTTCCGGGTT--TEEECCCTTTH
T ss_pred CCEEECCCCCcCCCCcCCCCChhHhc--CCCeEECcCCc
Confidence 46999999999999999999765322 23689999984
No 114
>2ldm_A Uncharacterized protein; PHF20, tudor domain, epigenetics, methylated P53, transcript factor, transcription-protein binding complex; HET: M2L; NMR {Homo sapiens}
Probab=94.14 E-value=0.0036 Score=55.67 Aligned_cols=54 Identities=20% Similarity=0.230 Sum_probs=45.9
Q ss_pred cccceEEEEecCCCceeeeeeEEeecCeeEEEEEecCCcccceecCceeeEeeecccc
Q 002926 803 AIGKRVEVHQQSDNSWHKGVVTDTVEGTSTLSITLDDSRVKTLELGKQGVRFVPQKQK 860 (864)
Q Consensus 803 a~~krvev~~~sd~~w~~g~v~~~~~~~~~~~v~~d~~~~~~~~~gk~~vr~~~~~~k 860 (864)
.+|-+|.-.|+ ||.|+.++|+.|... .+..|.|+||..++|.+- .||-+|++|+
T Consensus 8 kvGd~clAkws-Dg~wY~A~I~~v~~~-~~y~V~F~DGn~E~V~~s--~LrPl~~~~~ 61 (81)
T 2ldm_A 8 QINEQVLASWS-DSRFYPAKVTAVNKD-GTYTVKFYDGVVQTVKHI--HVKAFSKDQN 61 (81)
Confidence 57889999997 999999999999642 259999999999999875 5888888886
No 115
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=95.12 E-value=0.012 Score=58.97 Aligned_cols=32 Identities=6% Similarity=-0.064 Sum_probs=24.2
Q ss_pred cccccccCCCCC-ceeecCCCCCcccccccCCCC
Q 002926 201 ICEICRRTGDPN-KFMFCRRCDAAYHCYCQHPPH 233 (864)
Q Consensus 201 ~C~VCgk~gd~~-~LL~Cd~C~raYH~~CL~Ppl 233 (864)
+| +|+.+++.+ .+++|..|.+|||..|+....
T Consensus 7 yC-YCG~~~~~~~~mLqC~~C~qWFH~~Cl~~~~ 39 (177)
T 3rsn_A 7 SV-DEENGRQLGEVELQCGICTKWFTADTFGIDT 39 (177)
T ss_dssp -----CTTCCTTSCEEECTTTCCEEEGGGGTCCC
T ss_pred EE-EcCCCCCCCceeEeeccccceecHHHhcccc
Confidence 45 899988766 599999999999999998543
No 116
>1ssf_A Transformation related protein 53 binding protein 1; tudor domains, tandem, SH3-like fold, beta barrel, alpha- helix, cell cycle; NMR {Mus musculus} SCOP: b.34.9.1 b.34.9.1
Probab=94.91 E-value=0.021 Score=56.10 Aligned_cols=46 Identities=22% Similarity=0.293 Sum_probs=40.8
Q ss_pred ccccccceEEEEecCCCceeeeeeEEeecCeeEEEEEecCCccccee
Q 002926 800 GKDAIGKRVEVHQQSDNSWHKGVVTDTVEGTSTLSITLDDSRVKTLE 846 (864)
Q Consensus 800 g~da~~krvev~~~sd~~w~~g~v~~~~~~~~~~~v~~d~~~~~~~~ 846 (864)
|.+-||.||--+|++++-|+.|+|+.+.+++ ++.|.||||..++|.
T Consensus 7 ~~~~iG~rVfArWsd~~yyYpG~V~~~~~~~-~Y~V~FdDG~~k~v~ 52 (156)
T 1ssf_A 7 GNSFVGLRVVAKWSSNGYFYSGKITRDVGAG-KYKLLFDDGYECDVL 52 (156)
T ss_dssp -CCSTTCEEEECSSCSSEEEEEEEEECCTTT-EEEEECTTSCEEEEE
T ss_pred CcchhccEEEEEcCCCCcccccEEEEeccCC-EEEEEEcCCCeeEee
Confidence 7788999999999988899999999986555 699999999999996
No 117
>3p8d_A Medulloblastoma antigen MU-MB-50.72; tudor domain, lysine-methylated P53 binding, histone binding binding; 2.00A {Homo sapiens}
Probab=94.86 E-value=0.04 Score=47.36 Aligned_cols=54 Identities=22% Similarity=0.186 Sum_probs=43.6
Q ss_pred ccccceEEEEecCCCceeeeeeEEeecCeeEEEEEecCCcccceecCceeeEeeeccc
Q 002926 802 DAIGKRVEVHQQSDNSWHKGVVTDTVEGTSTLSITLDDSRVKTLELGKQGVRFVPQKQ 859 (864)
Q Consensus 802 da~~krvev~~~sd~~w~~g~v~~~~~~~~~~~v~~d~~~~~~~~~gk~~vr~~~~~~ 859 (864)
=.+|.+|...| +|+.|+.++|+.|.+- .+..|.|+||..+||.+- .||-+|.-|
T Consensus 7 ~~vGd~vmArW-~D~~yYpA~I~si~~~-~~Y~V~F~dG~~etvk~~--~ikp~~~~~ 60 (67)
T 3p8d_A 7 FQINEQVLACW-SDCRFYPAKVTAVNKD-GTYTVKFYDGVVQTVKHI--HVKAFSKDQ 60 (67)
T ss_dssp CCTTCEEEEEC-TTSCEEEEEEEEECTT-SEEEEEETTSCEEEEEGG--GEEECC---
T ss_pred cccCCEEEEEc-CCCCEeeEEEEEECCC-CeEEEEEeCCceEEEeHH--HcccCCccc
Confidence 36899999999 9999999999999774 349999999999999864 466666544
No 118
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=92.89 E-value=0.0049 Score=56.20 Aligned_cols=92 Identities=26% Similarity=0.674 Sum_probs=57.3
Q ss_pred cccccccccccccCcccCCceeecCCCCccccccccccCccccccCCCCCcCCCCCc------------------ccccc
Q 002926 144 NVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSCR------------------ICEIC 205 (864)
Q Consensus 144 dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~~~~~v~~~~W~CpeCk------------------~C~VC 205 (864)
...|.||...-.... .....+.-..|+..||..|+..+... ...||.|+ .|.+|
T Consensus 7 ~~~C~IC~~~~~~~~-~~~~~~~~~~CgH~fc~~Ci~~~~~~-------~~~CP~Cr~~~~~~~l~~l~i~~~~~~C~iC 78 (133)
T 4ap4_A 7 TVSCPICMDGYSEIV-QNGRLIVSTECGHVFCSQCLRDSLKN-------ANTCPTCRKKINHKRYHPIYIGSGTVSCPIC 78 (133)
T ss_dssp SCBCTTTCCBHHHHH-HTTCCEEEETTCCEEEHHHHHHHHTT-------CSBCTTTCCBCTTTCEEECBCSSSSCBCTTT
T ss_pred CCCCcccChhhhCcc-ccccCeEecCCCChhhHHHHHHHHHh-------CCCCCCCCCcCccccccccccCCCCCCCCCC
Confidence 458999986421000 00133455589999999999987542 23788887 67777
Q ss_pred ccCCCC----CceeecCCCCCcccccccCCCCcCCCCCCccccCCC
Q 002926 206 RRTGDP----NKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHT 247 (864)
Q Consensus 206 gk~gd~----~~LL~Cd~C~raYH~~CL~Ppl~svP~g~W~CP~C~ 247 (864)
...-.. ........|+..||..|+..-+.. ...||.|.
T Consensus 79 ~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~----~~~CP~Cr 120 (133)
T 4ap4_A 79 MDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN----ANTCPTCR 120 (133)
T ss_dssp CCBHHHHHHTTCCEEEETTSBEEEHHHHHHHHHH----CSBCTTTC
T ss_pred CCccccccccCcceEeCCCCChhhHHHHHHHHHc----CCCCCCCC
Confidence 653211 123455678888999998754322 23666664
No 119
>3h8z_A FragIle X mental retardation syndrome-related Pro; tudor domains, FXR2, structura genomics, structural genomics consortium, SGC; 1.92A {Homo sapiens} PDB: 3o8v_A 3kuf_A 2bkd_N*
Probab=92.52 E-value=0.16 Score=48.52 Aligned_cols=52 Identities=27% Similarity=0.416 Sum_probs=41.3
Q ss_pred cceEEEEecCCCceeeeeeEEeecCeeEEEEEecCCcccceecCceeeEeeeccc
Q 002926 805 GKRVEVHQQSDNSWHKGVVTDTVEGTSTLSITLDDSRVKTLELGKQGVRFVPQKQ 859 (864)
Q Consensus 805 ~krvev~~~sd~~w~~g~v~~~~~~~~~~~v~~d~~~~~~~~~gk~~vr~~~~~~ 859 (864)
+-.|||.. +.|.|++|+|.+|.+.. +.|.|+|.-+..-.+.=+-|||.|...
T Consensus 5 ~~~VEV~~-~~G~~y~a~V~~v~~d~--~~V~f~n~w~~~~~vp~~~vRlpP~~~ 56 (128)
T 3h8z_A 5 GLPVEVRG-SNGAFYKGFVKDVHEDS--VTIFFENNWQSERQIPFGDVRLPPPAD 56 (128)
T ss_dssp TCEEEEEC-TTSCEEEEEEEEECSSE--EEEEETTCTTCCEEEEGGGEECCCCC-
T ss_pred ccEEEEec-CCCCEEEEEEEEEeCCc--EEEEEccccCcceEechhhEEcCCCcc
Confidence 34699999 77999999999997777 999999865434456667899988653
No 120
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=92.49 E-value=0.03 Score=51.27 Aligned_cols=35 Identities=31% Similarity=0.647 Sum_probs=27.5
Q ss_pred ceeecCCCCCcccccccCCCC------cCCC-CCCccccCCC
Q 002926 213 KFMFCRRCDAAYHCYCQHPPH------KNVS-SGPYLCPKHT 247 (864)
Q Consensus 213 ~LL~Cd~C~raYH~~CL~Ppl------~svP-~g~W~CP~C~ 247 (864)
.|+.|+.|..|||..|+.... ..+| ...|.||.|.
T Consensus 1 ~mi~c~~c~~w~H~~c~~~~~~~~~~l~~lp~~~~~~c~~C~ 42 (140)
T 2ku7_A 1 SMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCT 42 (140)
T ss_dssp CCCCCSCCSSCHHHHHCCCCHHHHHHHHSSCTTTTCCSSCCT
T ss_pred CccccccCCCccCCcccccCHHHHHHHhhccccceeeCcccc
Confidence 389999999999999998532 3444 4579999986
No 121
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=92.42 E-value=0.017 Score=52.63 Aligned_cols=96 Identities=21% Similarity=0.508 Sum_probs=54.4
Q ss_pred eeecCCCCCcccccccCCCCcCCCCCCccccCCCcccCCCCCCCCCCCccccccCccccCCCcccccccccccccccccc
Q 002926 214 FMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHTKCHSCGSNVPGNGLSVRWFLGYTCCDACGRLFVKGNYCPVCLKVYR 293 (864)
Q Consensus 214 LL~Cd~C~raYH~~CL~Ppl~svP~g~W~CP~C~~C~~CG~~~pgk~ls~rW~~~~~lC~~C~elf~KgnyCpVC~K~Y~ 293 (864)
.+.-..|+..||..|+..-+.. ...||.|.. ..........+ +......|++|...|.
T Consensus 26 ~~~~~~CgH~fc~~Ci~~~~~~----~~~CP~Cr~------~~~~~~l~~l~------------i~~~~~~C~iC~~~~~ 83 (133)
T 4ap4_A 26 LIVSTECGHVFCSQCLRDSLKN----ANTCPTCRK------KINHKRYHPIY------------IGSGTVSCPICMDGYS 83 (133)
T ss_dssp CEEEETTCCEEEHHHHHHHHTT----CSBCTTTCC------BCTTTCEEECB------------CSSSSCBCTTTCCBHH
T ss_pred CeEecCCCChhhHHHHHHHHHh----CCCCCCCCC------cCccccccccc------------cCCCCCCCCCCCCccc
Confidence 3355589999999999854322 236777652 11111100000 0112345888888775
Q ss_pred CC-CCCCceeccCCCCccccccCCCChHHHhhhccCCCCceeCCCCCCC
Q 002926 294 DS-ESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGE 341 (864)
Q Consensus 294 D~-dg~~MVqCD~C~~WfH~eCd~l~dE~y~~~gid~~~~Y~CptCr~~ 341 (864)
+. +....+....|...||..|+. + +... ...||.|+..
T Consensus 84 ~~~~~~~~~~~~~CgH~fc~~Ci~---~-~~~~------~~~CP~Cr~~ 122 (133)
T 4ap4_A 84 EIVQNGRLIVSTECGHVFCSQCLR---D-SLKN------ANTCPTCRKK 122 (133)
T ss_dssp HHHHTTCCEEEETTSBEEEHHHHH---H-HHHH------CSBCTTTCCB
T ss_pred cccccCcceEeCCCCChhhHHHHH---H-HHHc------CCCCCCCCCc
Confidence 42 122334456799999999954 2 2111 3599999975
No 122
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=92.16 E-value=0.022 Score=63.19 Aligned_cols=91 Identities=14% Similarity=0.262 Sum_probs=59.8
Q ss_pred ccccccccccccccCcccCCceeecCCCCccccccccccCccccccCCCCCcCCCCCccccccccCCCCCceeecC--CC
Q 002926 143 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSCRICEICRRTGDPNKFMFCR--RC 220 (864)
Q Consensus 143 ~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~~~~~v~~~~W~CpeCk~C~VCgk~gd~~~LL~Cd--~C 220 (864)
.+..|..|+.-..-..-..-+.+.|..|-..|+..-.... ...+ ..+|.+|+.++ .++.|+ .|
T Consensus 49 ~e~~C~~CG~~~~~~~HPl~~v~lC~~Ck~~y~~~~f~~D--------~DG~----~~yCr~C~~Gg---~l~~Cdn~~C 113 (386)
T 2pv0_B 49 IEDICICCGSLQVHTQHPLFEGGICAPCKDKFLDALFLYD--------DDGY----QSYCSICCSGE---TLLICGNPDC 113 (386)
T ss_dssp GGGSBTTTCCSCCCSBCSSBSSBCCHHHHHHHHTTTTCBC--------SSSS----BCSCTTTCCCS---SCEECCSTTC
T ss_pred ccceeCCCCCcCccccCCCcCcchhhHHHHHHhccCcccC--------CCCC----cccceEcCCCC---eEEEeCCCCC
Confidence 4569999987532111222235678888888875433321 1222 22788888877 899999 99
Q ss_pred CCcccccccCCCCcC------CCCCCccccCCCc
Q 002926 221 DAAYHCYCQHPPHKN------VSSGPYLCPKHTK 248 (864)
Q Consensus 221 ~raYH~~CL~Ppl~s------vP~g~W~CP~C~~ 248 (864)
.+.|=..|+.-.+.. .....|.|-.|..
T Consensus 114 ~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p 147 (386)
T 2pv0_B 114 TRCYCFECVDSLVGPGTSGKVHAMSNWVCYLCLP 147 (386)
T ss_dssp CCEECHHHHHHHTCTTHHHHHHHCSSCCCTTTSS
T ss_pred CcchHHHHHHHhcChhHHHHhhccCCceEEEcCC
Confidence 999999999854321 2357899988763
No 123
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.80 E-value=0.21 Score=42.97 Aligned_cols=68 Identities=19% Similarity=0.506 Sum_probs=47.2
Q ss_pred CCccccccCccccCCCccccccccccccccccccCCCCCCceeccCCCCccccccCCCChHHHhhhccCCCCceeCCCCC
Q 002926 260 GLSVRWFLGYTCCDACGRLFVKGNYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCR 339 (864)
Q Consensus 260 ~ls~rW~~~~~lC~~C~elf~KgnyCpVC~K~Y~D~dg~~MVqCD~C~~WfH~eCd~l~dE~y~~~gid~~~~Y~CptCr 339 (864)
...|+|......|..|...+ ...|++|...|...+. .+.-..|.+.||..|+.. +.. ..-.||.||
T Consensus 6 ~~~w~~~~~~~~C~IC~~~~--~~~C~iC~~~~~~~~~--~~~~~~C~H~FH~~Ci~~----Wl~------~~~~CP~CR 71 (81)
T 2ecl_A 6 SGMWSWDVECDTCAICRVQV--MDACLRCQAENKQEDC--VVVWGECNHSFHNCCMSL----WVK------QNNRCPLCQ 71 (81)
T ss_dssp CCCCCCSCCCSCBTTTTBCT--TSCCTTHHHHTCTTTC--CEEEETTSCEEEHHHHHH----HTT------TCCBCTTTC
T ss_pred eEEeeecCCCCCCcccChhh--hccCcccccccCCCce--EEEeCCCCCccChHHHHH----HHH------hCCCCCCcC
Confidence 45678877778888888765 3469999988766543 233347999999999541 211 124899999
Q ss_pred CC
Q 002926 340 GE 341 (864)
Q Consensus 340 ~~ 341 (864)
..
T Consensus 72 ~~ 73 (81)
T 2ecl_A 72 QD 73 (81)
T ss_dssp CB
T ss_pred CC
Confidence 75
No 124
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=89.29 E-value=0.076 Score=52.55 Aligned_cols=90 Identities=13% Similarity=0.261 Sum_probs=60.1
Q ss_pred ccccccccccccccCcccCCceeecCCCCccccccccccCccccccCCCCCcCCCCCccccccccCCCCCceeecC--CC
Q 002926 143 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSCRICEICRRTGDPNKFMFCR--RC 220 (864)
Q Consensus 143 ~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~~~~~v~~~~W~CpeCk~C~VCgk~gd~~~LL~Cd--~C 220 (864)
.++.|..|+.-.....-..-..+.|..|-..|+..-...... .. ..+|.+|+.++ .++.|+ .|
T Consensus 35 ~e~~Ct~CG~~~~~~~HPlf~v~lC~~Ck~~y~e~~f~~DeD--------G~----~~yC~wC~~Gg---~l~~Cdn~~C 99 (159)
T 3a1b_A 35 IEDICISCGSLNVTLEHPLFVGGMCQNCKNCFLECAYQYDDD--------GY----QSYCTICCGGR---EVLMCGNNNC 99 (159)
T ss_dssp GGGSBTTTCCSCCCEECSSBSSEECHHHHHHHHHHTTCBCTT--------SS----BSSCTTTSCCS---EEEECSSTTT
T ss_pred ccCcccCCCCcCccccCCCccchhhHHHHHHHhhcccccCCC--------CC----cceeeEecCCC---eEEeeCCCCC
Confidence 467999998642211122224568888888887554443221 11 12788888877 899999 89
Q ss_pred CCcccccccCCCCcC------CCCCCccccCCC
Q 002926 221 DAAYHCYCQHPPHKN------VSSGPYLCPKHT 247 (864)
Q Consensus 221 ~raYH~~CL~Ppl~s------vP~g~W~CP~C~ 247 (864)
.+.|=..|+.-.+.. .....|.|-.|.
T Consensus 100 ~r~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C~ 132 (159)
T 3a1b_A 100 CRCFCVECVDLLVGPGAAQAAIKEDPWNCYMCG 132 (159)
T ss_dssp CCEEEHHHHHHHTCTTHHHHHHTSSSCCCTTTC
T ss_pred CCchhHHHHHHhcCHhHHHHHhccCCCEEEecC
Confidence 999999999843322 356899998875
No 125
>1mhn_A SurviVal motor neuron protein; SMN, SMA, spinal muscular atrophy, RNA binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 PDB: 4a4e_A* 4a4g_A*
Probab=89.03 E-value=0.66 Score=38.11 Aligned_cols=52 Identities=8% Similarity=0.033 Sum_probs=41.6
Q ss_pred cccceEEEEecCCCceeeeeeEEeecCeeEEEEEecC-CcccceecCceeeEeee
Q 002926 803 AIGKRVEVHQQSDNSWHKGVVTDTVEGTSTLSITLDD-SRVKTLELGKQGVRFVP 856 (864)
Q Consensus 803 a~~krvev~~~sd~~w~~g~v~~~~~~~~~~~v~~d~-~~~~~~~~gk~~vr~~~ 856 (864)
.+|-.+-..++.||.|+.++|..|.....+..|.|.| |..+++.+.. +|-+|
T Consensus 5 ~~G~~c~A~~s~Dg~wYrA~I~~i~~~~~~~~V~f~DYGn~e~v~~~~--Lr~~~ 57 (59)
T 1mhn_A 5 KVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGNREEQNLSD--LLSPI 57 (59)
T ss_dssp CTTCEEEEECTTTSCEEEEEEEEEETTTTEEEEEETTTTEEEEEEGGG--CBCTT
T ss_pred CcCCEEEEEECCCCCEEEEEEEEEcCCCCEEEEEEEcCCCEEEEcHHH--eeCCC
Confidence 5788888888779999999999998633459999988 9888887653 55554
No 126
>2d9t_A Tudor domain-containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.34.9.1
Probab=88.09 E-value=0.96 Score=39.34 Aligned_cols=55 Identities=15% Similarity=0.151 Sum_probs=45.1
Q ss_pred cccceEEEEecCCCceeeeeeEEeecCeeEEEEEecC-CcccceecCceeeEeeeccc
Q 002926 803 AIGKRVEVHQQSDNSWHKGVVTDTVEGTSTLSITLDD-SRVKTLELGKQGVRFVPQKQ 859 (864)
Q Consensus 803 a~~krvev~~~sd~~w~~g~v~~~~~~~~~~~v~~d~-~~~~~~~~gk~~vr~~~~~~ 859 (864)
.+|..+-....-||.|+.++|+.|.....++.|.|-| |..++|.+- .+|-||...
T Consensus 11 ~~G~~c~A~~s~Dg~wYRA~I~~i~~~~~~~~V~fiDYGN~e~V~~~--~Lr~l~~~l 66 (78)
T 2d9t_A 11 KPGDECFALYWEDNKFYRAEVEALHSSGMTAVVKFTDYGNYEEVLLS--NIKPVQTEA 66 (78)
T ss_dssp CTTCEEEEECTTTCCEEEEEEEEECSSSSEEEEEETTTTEEEEEEGG--GEEECCCCC
T ss_pred CcCCEEEEEECCCCCEEEEEEEEEeCCCCEEEEEEEcCCCeEEEcHH--HeEeCCHHH
Confidence 4788888888779999999999998744458999887 999999874 688887654
No 127
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=86.60 E-value=0.16 Score=50.19 Aligned_cols=50 Identities=20% Similarity=0.614 Sum_probs=38.6
Q ss_pred cccccccccccccccCcccCCceeecC--CCCccccccccccCcccc---ccCCCCCcCCCCC
Q 002926 142 NTNVMCRLCFVGENEGCERARRMLSCK--SCGKKYHRNCLKNWAQNR---DLFHWSSWKCPSC 199 (864)
Q Consensus 142 ~~dd~C~vC~~gG~~gs~~~eeLL~Cd--~C~raYH~~CL~p~~~~~---~~v~~~~W~CpeC 199 (864)
..+.+|.+|..|| +|+.|+ .|.+.|-..||.....+. .+.....|.|--|
T Consensus 77 G~~~yC~wC~~Gg--------~l~~Cdn~~C~r~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C 131 (159)
T 3a1b_A 77 GYQSYCTICCGGR--------EVLMCGNNNCCRCFCVECVDLLVGPGAAQAAIKEDPWNCYMC 131 (159)
T ss_dssp SSBSSCTTTSCCS--------EEEECSSTTTCCEEEHHHHHHHTCTTHHHHHHTSSSCCCTTT
T ss_pred CCcceeeEecCCC--------eEEeeCCCCCCCchhHHHHHHhcCHhHHHHHhccCCCEEEec
Confidence 3567999999887 999999 899999999997754331 1234679987766
No 128
>3pnw_C Tudor domain-containing protein 3; FAB, structural genomics consortium, antibody, SGC, protein immune system complex; 2.05A {Homo sapiens}
Probab=86.45 E-value=1.2 Score=38.78 Aligned_cols=67 Identities=12% Similarity=0.099 Sum_probs=46.9
Q ss_pred hhhhHHHHHHhccccccceEEEEecCCCceeeeeeEEeecCeeEEEEEecC-CcccceecCceeeEeeec
Q 002926 789 IMDANWILKKLGKDAIGKRVEVHQQSDNSWHKGVVTDTVEGTSTLSITLDD-SRVKTLELGKQGVRFVPQ 857 (864)
Q Consensus 789 ~~d~~~il~~lg~da~~krvev~~~sd~~w~~g~v~~~~~~~~~~~v~~d~-~~~~~~~~gk~~vr~~~~ 857 (864)
++|+..--....+=.+|..+-...+.||.|+.++|+.|.....++.|.|.| |..+++.+ ..+|-||.
T Consensus 5 ~l~~~~~~e~~~~~kvGd~C~A~ys~Dg~wYRA~I~~i~~~~~~~~V~fvDYGN~e~V~~--~~Lr~l~~ 72 (77)
T 3pnw_C 5 ILESSIPMEYAKMWKPGDECFALYWEDNKFYRAEVEALHSSGMTAVVKFIDYGNYEEVLL--SNIKPIQT 72 (77)
T ss_dssp ------CHHHHTTCCTTCEEEEEETTTTEEEEEEEEEECTTSSEEEEEETTTCCEEEEEG--GGEECC--
T ss_pred ccccccchhhcCCCCcCCEEEEEECCCCCEEEEEEEEEeCCCCEEEEEEEcCCCeEEEeH--HHeEECCh
Confidence 344555445566678899999999889999999999997543448888877 88888775 34677764
No 129
>3s6w_A Tudor domain-containing protein 3; methylated arginine recognize, ISO-propanol, transcri; 1.78A {Homo sapiens} PDB: 3pmt_A*
Probab=86.41 E-value=1.2 Score=35.89 Aligned_cols=45 Identities=16% Similarity=0.110 Sum_probs=34.4
Q ss_pred ccceEEEEecCCCceeeeeeEEeecCeeEEEEEecC-CcccceecC
Q 002926 804 IGKRVEVHQQSDNSWHKGVVTDTVEGTSTLSITLDD-SRVKTLELG 848 (864)
Q Consensus 804 ~~krvev~~~sd~~w~~g~v~~~~~~~~~~~v~~d~-~~~~~~~~g 848 (864)
+|-.+-...+.||.|+.++|..|.....+..|.|.| |..+++.+.
T Consensus 4 ~G~~c~A~~s~Dg~wYrA~I~~i~~~~~~~~V~fvDYGn~e~v~~~ 49 (54)
T 3s6w_A 4 PGDECFALYWEDNKFYRAEVEALHSSGMTAVVKFIDYGNYEEVLLS 49 (54)
T ss_dssp TTCEEEEEETTTTEEEEEEEEEC--CCSEEEEEETTTCCEEEEEGG
T ss_pred CCCEEEEEECCCCCEEEEEEEEEeCCCCEEEEEEEccCCeEEEeHH
Confidence 577788888889999999999997533448888877 888877653
No 130
>4a4f_A SurviVal of motor neuron-related-splicing factor; RNA binding protein; HET: 2MR; NMR {Homo sapiens} PDB: 4a4h_A*
Probab=85.95 E-value=1.2 Score=37.32 Aligned_cols=46 Identities=15% Similarity=0.180 Sum_probs=37.5
Q ss_pred cccceEEEEecCCCceeeeeeEEeecCeeEEEEEecC-CcccceecC
Q 002926 803 AIGKRVEVHQQSDNSWHKGVVTDTVEGTSTLSITLDD-SRVKTLELG 848 (864)
Q Consensus 803 a~~krvev~~~sd~~w~~g~v~~~~~~~~~~~v~~d~-~~~~~~~~g 848 (864)
.+|-.+-..++.||.|+.++|..|.+...+..|.|.| |..+++.+.
T Consensus 10 ~vGd~c~A~~s~Dg~wYrA~I~~v~~~~~~~~V~fvdYGn~e~V~~~ 56 (64)
T 4a4f_A 10 KVGDKCMAVWSEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVTPLL 56 (64)
T ss_dssp CTTCEEEEECTTTSSEEEEEEEEEETTTTEEEEEETTTTEEEEEEGG
T ss_pred CCCCEEEEEECCCCCEEEEEEEEEcCCCCEEEEEEEecCCEEEEeHH
Confidence 5788899999889999999999998632348899887 787777654
No 131
>1g5v_A SurviVal motor neuron protein 1; mRNA processing, translation; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=84.04 E-value=1.5 Score=39.28 Aligned_cols=54 Identities=7% Similarity=-0.015 Sum_probs=41.6
Q ss_pred ccccceEEEEecCCCceeeeeeEEeecCeeEEEEEecC-CcccceecCceeeEeeec
Q 002926 802 DAIGKRVEVHQQSDNSWHKGVVTDTVEGTSTLSITLDD-SRVKTLELGKQGVRFVPQ 857 (864)
Q Consensus 802 da~~krvev~~~sd~~w~~g~v~~~~~~~~~~~v~~d~-~~~~~~~~gk~~vr~~~~ 857 (864)
=.+|-.+-..++.||.|+.++|..|.....++.|.|.| |..++|.+-. +|-|+.
T Consensus 11 ~kvGd~C~A~ys~Dg~wYrA~I~~i~~~~~~~~V~fiDYGN~E~V~~~~--Lrp~~~ 65 (88)
T 1g5v_A 11 WKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGNREEQNLSD--LLSPIC 65 (88)
T ss_dssp CCSSCEEEEECTTTCCEEEEEEEEEETTTTEEEEEETTTCCEEEEEGGG--CBCCC-
T ss_pred CCCCCEEEEEECCCCCEEEEEEEEecCCCCEEEEEEecCCCEEEEcHHH--cccCCh
Confidence 46799999999889999999999998633348898876 8888887653 555443
No 132
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=83.88 E-value=0.37 Score=42.08 Aligned_cols=49 Identities=20% Similarity=0.713 Sum_probs=30.1
Q ss_pred cccccccccccccccCcccCCceee-c--CCCCccccccccccCccccccCCCCCcCCCCC
Q 002926 142 NTNVMCRLCFVGENEGCERARRMLS-C--KSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSC 199 (864)
Q Consensus 142 ~~dd~C~vC~~gG~~gs~~~eeLL~-C--d~C~raYH~~CL~p~~~~~~~v~~~~W~CpeC 199 (864)
..++.|.||...... .+.|+. | .+....||..||..|.... ....||-|
T Consensus 13 ~~~~~C~IC~~~~~~----~~~l~~pC~C~Gs~h~fH~~Cl~~Wl~~~-----~~~~CplC 64 (80)
T 2d8s_A 13 SSQDICRICHCEGDD----ESPLITPCHCTGSLHFVHQACLQQWIKSS-----DTRCCELC 64 (80)
T ss_dssp TTSCCCSSSCCCCCS----SSCEECSSSCCSSSCCEETTHHHHHHHHH-----CCSBCSSS
T ss_pred CCCCCCeEcCccccC----CCeeEeccccCCcCCeeCHHHHHHHHhhC-----CCCCCCCC
Confidence 345689999965421 124442 2 2335999999999987642 23455555
No 133
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=83.45 E-value=0.68 Score=36.11 Aligned_cols=46 Identities=26% Similarity=0.737 Sum_probs=30.1
Q ss_pred cccccccccccccCcccCCceeecCCCCccccccccccCccccccCCCCCcCCCCCc
Q 002926 144 NVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSCR 200 (864)
Q Consensus 144 dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~~~~~v~~~~W~CpeCk 200 (864)
+..|.||...-. ..+..+....|+..||..|+..|... ...||.|+
T Consensus 5 ~~~C~IC~~~~~----~~~~~~~~~~C~H~f~~~Ci~~w~~~-------~~~CP~Cr 50 (55)
T 1iym_A 5 GVECAVCLAELE----DGEEARFLPRCGHGFHAECVDMWLGS-------HSTCPLCR 50 (55)
T ss_dssp SCCCTTTCCCCC----TTSCCEECSSSCCEECTTHHHHTTTT-------CCSCSSSC
T ss_pred CCcCccCCcccc----CCCceEECCCCCCcccHHHHHHHHHc-------CCcCcCCC
Confidence 457999986431 11234444579999999999887642 34576663
No 134
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=81.80 E-value=0.32 Score=54.12 Aligned_cols=52 Identities=25% Similarity=0.676 Sum_probs=38.9
Q ss_pred CcccccccccccccccCcccCCceeecC--CCCccccccccccCcccc---ccCCCCCcCCCCCc
Q 002926 141 SNTNVMCRLCFVGENEGCERARRMLSCK--SCGKKYHRNCLKNWAQNR---DLFHWSSWKCPSCR 200 (864)
Q Consensus 141 s~~dd~C~vC~~gG~~gs~~~eeLL~Cd--~C~raYH~~CL~p~~~~~---~~v~~~~W~CpeCk 200 (864)
...+.+|.+|..+| +|++|+ .|++.|-..|+.....+. .+.....|.|--|.
T Consensus 90 DG~~~yCr~C~~Gg--------~l~~Cdn~~C~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~ 146 (386)
T 2pv0_B 90 DGYQSYCSICCSGE--------TLLICGNPDCTRCYCFECVDSLVGPGTSGKVHAMSNWVCYLCL 146 (386)
T ss_dssp SSSBCSCTTTCCCS--------SCEECCSTTCCCEECHHHHHHHTCTTHHHHHHHCSSCCCTTTS
T ss_pred CCCcccceEcCCCC--------eEEEeCCCCCCcchHHHHHHHhcChhHHHHhhccCCceEEEcC
Confidence 44677999999887 899999 999999999998754221 11224789877663
No 135
>2lcd_A AT-rich interactive domain-containing protein 4A; tudor domain, RBBP1, transcription; NMR {Homo sapiens}
Probab=82.43 E-value=0.29 Score=46.06 Aligned_cols=46 Identities=24% Similarity=0.421 Sum_probs=40.4
Q ss_pred hccccccceEEEEecCCCceeeeeeEEeecCeeEEEEEecCCccccee
Q 002926 799 LGKDAIGKRVEVHQQSDNSWHKGVVTDTVEGTSTLSITLDDSRVKTLE 846 (864)
Q Consensus 799 lg~da~~krvev~~~sd~~w~~g~v~~~~~~~~~~~v~~d~~~~~~~~ 846 (864)
-|.=++|-.||+..+ |+.|-.|||..|. .-|+..|-||||+.+||.
T Consensus 54 kG~l~vG~~ve~~~~-~~~~~~~~I~~i~-D~S~YtVVFdDGD~ktLr 99 (118)
T 2lcd_A 54 KGPLRVGAIVETRTS-DGSFQEAIISKLT-DASWYTVVFDDGDERTLR 99 (118)
Confidence 477789999999996 7899999998874 568899999999999985
No 136
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=81.27 E-value=0.89 Score=39.43 Aligned_cols=36 Identities=25% Similarity=0.625 Sum_probs=28.0
Q ss_pred ccccccccccccccCcccCCceeecCCCCccccccccccCccc
Q 002926 143 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQN 185 (864)
Q Consensus 143 ~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~~ 185 (864)
..+.|.||..--. .-+.|..|+..||..|+..|...
T Consensus 14 ~i~~C~IC~~~i~-------~g~~C~~C~h~fH~~Ci~kWl~~ 49 (74)
T 2ct0_A 14 AVKICNICHSLLI-------QGQSCETCGIRMHLPCVAKYFQS 49 (74)
T ss_dssp SSCBCSSSCCBCS-------SSEECSSSCCEECHHHHHHHSTT
T ss_pred CCCcCcchhhHcc-------cCCccCCCCchhhHHHHHHHHHh
Confidence 4468999997432 34588899999999999987753
No 137
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=80.74 E-value=1.1 Score=37.46 Aligned_cols=38 Identities=16% Similarity=0.538 Sum_probs=24.9
Q ss_pred cccccccccccccccCcccCCceeecCCCCccccccccccCcc
Q 002926 142 NTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQ 184 (864)
Q Consensus 142 ~~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~ 184 (864)
.....|.||...-. .. ..+.--.|+..||..|+..|..
T Consensus 13 ~~~~~C~IC~~~~~----~~-~~~~~~~C~H~fc~~Ci~~~~~ 50 (78)
T 2ect_A 13 GSGLECPVCKEDYA----LG-ESVRQLPCNHLFHDSCIVPWLE 50 (78)
T ss_dssp SSSCCCTTTTSCCC----TT-SCEEECTTSCEEETTTTHHHHT
T ss_pred CCCCCCeeCCcccc----CC-CCEEEeCCCCeecHHHHHHHHH
Confidence 44568999986421 11 2222236999999999987653
No 138
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=80.13 E-value=0.47 Score=39.66 Aligned_cols=37 Identities=22% Similarity=0.813 Sum_probs=26.2
Q ss_pred ccccccccccccccCcccCCceeecCCCCccccccccccCcc
Q 002926 143 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQ 184 (864)
Q Consensus 143 ~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~ 184 (864)
.+..|.||...-.. .+.+..-.|+..||..|+..|..
T Consensus 22 ~~~~C~IC~~~~~~-----~~~~~~l~C~H~fh~~Ci~~w~~ 58 (75)
T 1x4j_A 22 EQTLCVVCMCDFES-----RQLLRVLPCNHEFHAKCVDKWLK 58 (75)
T ss_dssp SCCEETTTTEECCB-----TCEEEEETTTEEEETTHHHHHHH
T ss_pred CCCCCeECCcccCC-----CCeEEEECCCCHhHHHHHHHHHH
Confidence 45689999964211 13444556999999999998764
No 139
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=80.09 E-value=0.59 Score=38.26 Aligned_cols=38 Identities=21% Similarity=0.551 Sum_probs=25.7
Q ss_pred cccccccccccccccCcccCCceeecCCCCccccccccccCcc
Q 002926 142 NTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQ 184 (864)
Q Consensus 142 ~~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~ 184 (864)
.....|.||...-.. ...+....|+..||..|+..|..
T Consensus 12 ~~~~~C~IC~~~~~~-----~~~~~~~~C~H~fc~~Ci~~~~~ 49 (69)
T 2kiz_A 12 DTEEKCTICLSILEE-----GEDVRRLPCMHLFHQVCVDQWLI 49 (69)
T ss_dssp TCCCSBTTTTBCCCS-----SSCEEECTTSCEEEHHHHHHHHH
T ss_pred CCCCCCeeCCccccC-----CCcEEEeCCCCHHHHHHHHHHHH
Confidence 345689999763211 12344457999999999998764
No 140
>2wac_A CG7008-PA; unknown function, tudor, beta-barrel, nuclease domain, tudor P100, SND1, methylated arginine, SDMA, splicing; 2.10A {Drosophila melanogaster}
Probab=78.50 E-value=3.3 Score=40.92 Aligned_cols=51 Identities=20% Similarity=0.278 Sum_probs=41.0
Q ss_pred cccceEEEEecCCCceeeeeeEEeecCeeEEEEEe-cCCcccceecCceeeEeeec
Q 002926 803 AIGKRVEVHQQSDNSWHKGVVTDTVEGTSTLSITL-DDSRVKTLELGKQGVRFVPQ 857 (864)
Q Consensus 803 a~~krvev~~~sd~~w~~g~v~~~~~~~~~~~v~~-d~~~~~~~~~gk~~vr~~~~ 857 (864)
.+|.-+-+...-|+.|+.|+|+.|..++ +.|.| |-|..+++.+. .+|.||.
T Consensus 53 ~~g~~c~a~~~~d~~wyRa~V~~v~~~~--~~V~~vDyG~~~~v~~~--~l~~l~~ 104 (218)
T 2wac_A 53 KRGDLVAAQFTLDNQWYRAKVERVQGSN--ATVLYIDYGNKETLPTN--RLAALPP 104 (218)
T ss_dssp CTTCEEEEECTTTCCEEEEEEEEEETTE--EEEEETTTCCEEEEEGG--GEEECCG
T ss_pred CcCCEEEEEECCCCeEEEEEEEEecCCe--EEEEEEecCCeEEEchH--HcccCCh
Confidence 5788999988779999999999998866 88886 55999988654 3666653
No 141
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=78.29 E-value=0.86 Score=40.92 Aligned_cols=55 Identities=22% Similarity=0.407 Sum_probs=31.4
Q ss_pred cccccccccccccCc----------ccCCceeecCCCCccccccccccCccccccCCCCCcCCCCCc
Q 002926 144 NVMCRLCFVGENEGC----------ERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSCR 200 (864)
Q Consensus 144 dd~C~vC~~gG~~gs----------~~~eeLL~Cd~C~raYH~~CL~p~~~~~~~v~~~~W~CpeCk 200 (864)
+..|.||...-.... ......+.-..|+..||..||..|..... ......||.|+
T Consensus 25 ~~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~--~~~~~~CP~CR 89 (114)
T 1v87_A 25 EEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGN--KDGSLQCPSCK 89 (114)
T ss_dssp SCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTC--CSSCCBCTTTC
T ss_pred CCcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHccc--CCCCCcCCCCC
Confidence 458999986421110 11112333567999999999998763211 12345566663
No 142
>1rut_X Flinc4, fusion protein of LMO4 protein and LIM domain- binding protein 1; B-tandem zipper, protein binding; 1.30A {Mus musculus} SCOP: g.39.1.3 g.39.1.3 g.39.1.3 g.39.1.3 PDB: 2dfy_X 2xjz_I 2xjy_B
Probab=77.77 E-value=0.52 Score=46.52 Aligned_cols=28 Identities=18% Similarity=0.265 Sum_probs=15.7
Q ss_pred cCccccCCCccc-cccccccccccccccC
Q 002926 267 LGYTCCDACGRL-FVKGNYCPVCLKVYRD 294 (864)
Q Consensus 267 ~~~~lC~~C~el-f~KgnyCpVC~K~Y~D 294 (864)
.+.++|..|... |.....|..|.+....
T Consensus 53 ~g~~yC~~cy~~~~~~~~~C~~C~~~I~~ 81 (188)
T 1rut_X 53 SGMILCRNDYIRLFGNSGACSACGQSIPA 81 (188)
T ss_dssp TTEEECHHHHHHHHSCCEECTTTCCEECT
T ss_pred CCccccccccccccccCCccccCCCcccc
Confidence 456777777532 2222258888776543
No 143
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=77.58 E-value=1.1 Score=34.86 Aligned_cols=48 Identities=31% Similarity=0.638 Sum_probs=32.0
Q ss_pred ccccccccccccCCCCCCceeccCCCCccccccCCCChHHHhhhccCCCCceeCCCCCCC
Q 002926 282 GNYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGE 341 (864)
Q Consensus 282 gnyCpVC~K~Y~D~dg~~MVqCD~C~~WfH~eCd~l~dE~y~~~gid~~~~Y~CptCr~~ 341 (864)
...|+||...|.+.+. .+....|...||..|+.. |.. ....||.|+..
T Consensus 5 ~~~C~IC~~~~~~~~~--~~~~~~C~H~f~~~Ci~~----w~~------~~~~CP~Cr~~ 52 (55)
T 1iym_A 5 GVECAVCLAELEDGEE--ARFLPRCGHGFHAECVDM----WLG------SHSTCPLCRLT 52 (55)
T ss_dssp SCCCTTTCCCCCTTSC--CEECSSSCCEECTTHHHH----TTT------TCCSCSSSCCC
T ss_pred CCcCccCCccccCCCc--eEECCCCCCcccHHHHHH----HHH------cCCcCcCCCCE
Confidence 3468899888766543 233446999999999641 111 14589999864
No 144
>2xjy_A Rhombotin-2; oncoprotein, T-cell leukemia, proto-oncogene, transcription, developmental protein; 2.40A {Homo sapiens} PDB: 2xjz_A
Probab=77.05 E-value=1.4 Score=40.58 Aligned_cols=50 Identities=24% Similarity=0.426 Sum_probs=25.2
Q ss_pred CCCcccCCCCCCCCCCCccccccCccccCCCccc-cccccccccccccccC
Q 002926 245 KHTKCHSCGSNVPGNGLSVRWFLGYTCCDACGRL-FVKGNYCPVCLKVYRD 294 (864)
Q Consensus 245 ~C~~C~~CG~~~pgk~ls~rW~~~~~lC~~C~el-f~KgnyCpVC~K~Y~D 294 (864)
.|..|..|+..........-+..+.++|..|... |.....|..|.+....
T Consensus 28 ~CF~C~~C~~~L~~~~~~~~~~~g~~yC~~~y~~~~~~~~~C~~C~~~I~~ 78 (131)
T 2xjy_A 28 DCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYLRLFGQDGLCASCDKRIRA 78 (131)
T ss_dssp TTCBCTTTCCBCSSTTCCEEEETTEEECHHHHHHHHCCCEECTTTCCEECT
T ss_pred HHcccCcCCCccccCCCeEEEECCEEeecCchhhhCCCccChhhcCCccCc
Confidence 3444667765542111222334466777776532 2111267778776543
No 145
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=75.28 E-value=0.97 Score=35.11 Aligned_cols=45 Identities=24% Similarity=0.736 Sum_probs=30.1
Q ss_pred cccccccccccccCcccCCceeecCCCCccccccccccCccccccCCCCCcCCCCC
Q 002926 144 NVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSC 199 (864)
Q Consensus 144 dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~~~~~v~~~~W~CpeC 199 (864)
+..|.||...-. .....+....|+..||..|+..+... ...||.|
T Consensus 5 ~~~C~IC~~~~~----~~~~~~~~~~CgH~fc~~Ci~~~~~~-------~~~CP~C 49 (55)
T 2ecm_A 5 SSGCPICLEDIH----TSRVVAHVLPCGHLLHRTCYEEMLKE-------GYRCPLC 49 (55)
T ss_dssp CCSCTTTCCCCC----TTTSCEEECTTSCEEETTHHHHHHHH-------TCCCTTS
T ss_pred CCcCcccChhhc----CCCcCeEecCCCCcccHHHHHHHHHc-------CCcCCCC
Confidence 458999986421 11234556679999999999987642 1456665
No 146
>2rgt_A Fusion of LIM/homeobox protein LHX3, linker, INSU enhancer protein ISL-1; protein-protein complex, LIM domain, Zn finger, activator, D binding; 2.05A {Mus musculus} PDB: 3mmk_A
Probab=75.05 E-value=2.3 Score=41.07 Aligned_cols=61 Identities=16% Similarity=0.173 Sum_probs=28.0
Q ss_pred CCcccCCCCCCCCCCCccccccCccccCCCccccccccccccccccccCCCCCCceeccCCCCcccccc
Q 002926 246 HTKCHSCGSNVPGNGLSVRWFLGYTCCDACGRLFVKGNYCPVCLKVYRDSESTPMVCCDVCQRWVHCQC 314 (864)
Q Consensus 246 C~~C~~CG~~~pgk~ls~rW~~~~~lC~~C~elf~KgnyCpVC~K~Y~D~dg~~MVqCD~C~~WfH~eC 314 (864)
|..|..|+....+.. . ...+.++|..|.... -+..|..|.+.....+ ++. ..-...||..|
T Consensus 33 CF~C~~C~~~L~~~~--f-~~~g~~yC~~~y~~~-f~~~C~~C~~~I~~~~---~v~-~a~~~~~H~~C 93 (169)
T 2rgt_A 33 CLKCSDCHVPLAERC--F-SRGESVYCKDDFFKR-FGTKCAACQLGIPPTQ---VVR-RAQDFVYHLHC 93 (169)
T ss_dssp TSBCTTTCCBCCSCC--E-ESSSCEECHHHHHHH-HSCBCTTTCCBCCTTS---EEE-EETTEEEEGGG
T ss_pred cCccCCCCCcCCCCC--c-ccCCeeeeccccccc-ccccccccccccCCCc---EEE-EcCCceEeeCC
Confidence 333666665443321 1 233556676664211 1234666766543221 211 12345677776
No 147
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=74.67 E-value=1 Score=39.38 Aligned_cols=37 Identities=22% Similarity=0.644 Sum_probs=25.0
Q ss_pred ccccccccccccccCcccCCceeecCCCCccccccccccCcc
Q 002926 143 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQ 184 (864)
Q Consensus 143 ~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~ 184 (864)
.+..|.||...-..+ +.+..-.|+..||..|+..|..
T Consensus 39 ~~~~C~IC~~~~~~~-----~~~~~l~C~H~Fh~~Ci~~wl~ 75 (91)
T 2l0b_A 39 QEMCCPICCSEYVKG-----DVATELPCHHYFHKPCVSIWLQ 75 (91)
T ss_dssp SCSEETTTTEECCTT-----CEEEEETTTEEEEHHHHHHHHT
T ss_pred CCCCCcccChhhcCC-----CcEEecCCCChHHHHHHHHHHH
Confidence 455899998642111 2333345999999999998764
No 148
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=73.82 E-value=0.96 Score=41.41 Aligned_cols=42 Identities=14% Similarity=0.418 Sum_probs=25.3
Q ss_pred ccccccccccccccC----------cccCCceeecCCCCccccccccccCcc
Q 002926 143 TNVMCRLCFVGENEG----------CERARRMLSCKSCGKKYHRNCLKNWAQ 184 (864)
Q Consensus 143 ~dd~C~vC~~gG~~g----------s~~~eeLL~Cd~C~raYH~~CL~p~~~ 184 (864)
.++.|.||...-... ....+..+.-..|+..||..|+..|+.
T Consensus 36 ~~d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~ 87 (106)
T 3dpl_R 36 VVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLK 87 (106)
T ss_dssp CSCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHT
T ss_pred CCCCCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHHHHHH
Confidence 346788987542111 011112334457999999999998764
No 149
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=73.49 E-value=1.7 Score=36.31 Aligned_cols=47 Identities=34% Similarity=0.605 Sum_probs=30.5
Q ss_pred cccccccccccCCCCCCceeccCCCCccccccCCCChHHHhhhccCCCCceeCCCCCCCC
Q 002926 283 NYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGEC 342 (864)
Q Consensus 283 nyCpVC~K~Y~D~dg~~MVqCD~C~~WfH~eCd~l~dE~y~~~gid~~~~Y~CptCr~~~ 342 (864)
..|+||...|.+... +.--.|.+.||..|+. . |.. ....||.|+...
T Consensus 16 ~~C~IC~~~~~~~~~---~~~~~C~H~fc~~Ci~---~-~~~------~~~~CP~Cr~~~ 62 (78)
T 2ect_A 16 LECPVCKEDYALGES---VRQLPCNHLFHDSCIV---P-WLE------QHDSCPVCRKSL 62 (78)
T ss_dssp CCCTTTTSCCCTTSC---EEECTTSCEEETTTTH---H-HHT------TTCSCTTTCCCC
T ss_pred CCCeeCCccccCCCC---EEEeCCCCeecHHHHH---H-HHH------cCCcCcCcCCcc
Confidence 468899887755432 2222489999999954 2 221 136899999753
No 150
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=72.83 E-value=2.2 Score=38.21 Aligned_cols=54 Identities=15% Similarity=0.329 Sum_probs=32.8
Q ss_pred cccccccccccCCC-----------CC-CceeccCCCCccccccCCCChHHHhhhccCCCCceeCCCCCCC
Q 002926 283 NYCPVCLKVYRDSE-----------ST-PMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGE 341 (864)
Q Consensus 283 nyCpVC~K~Y~D~d-----------g~-~MVqCD~C~~WfH~eCd~l~dE~y~~~gid~~~~Y~CptCr~~ 341 (864)
..|+||...|.+.. .. ..+.--.|.+.||..|+. . |.... .......||.||..
T Consensus 26 ~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~---~-wl~~~-~~~~~~~CP~CR~~ 91 (114)
T 1v87_A 26 EDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLL---A-MYCNG-NKDGSLQCPSCKTI 91 (114)
T ss_dssp CEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHH---H-HHHHT-CCSSCCBCTTTCCB
T ss_pred CcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHH---H-HHHcc-cCCCCCcCCCCCCc
Confidence 35888888775432 11 122345699999999955 2 22211 11346799999964
No 151
>2jtn_A LIM domain-binding protein 1, LIM/homeobox protein LHX3; intramolecular (fusion) protein-protein complex, protein binding/transcription complex; NMR {Mus musculus}
Probab=72.15 E-value=2.6 Score=41.17 Aligned_cols=40 Identities=15% Similarity=0.150 Sum_probs=18.3
Q ss_pred ccCCCCCCCCCCCccccccCccccCCCccccccccccccccccc
Q 002926 249 CHSCGSNVPGNGLSVRWFLGYTCCDACGRLFVKGNYCPVCLKVY 292 (864)
Q Consensus 249 C~~CG~~~pgk~ls~rW~~~~~lC~~C~elf~KgnyCpVC~K~Y 292 (864)
|..|+....+.. . ...+.++|..|.... -+..|..|.+..
T Consensus 90 C~~C~~~L~~~~--f-~~~g~~yC~~~y~~~-f~~kC~~C~~~I 129 (182)
T 2jtn_A 90 CSDCHVPLAERC--F-SRGESVYCKDDFFKR-FGTKCAACQLGI 129 (182)
T ss_dssp CTTTCCCCSSCC--E-EETTEEECHHHHHHT-TSCCCTTTCCCC
T ss_pred cCCCCCccCCCc--e-eECCEeeecCccccc-cccccccCCCcc
Confidence 556655443221 1 233556666654211 123466666544
No 152
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=71.69 E-value=1.8 Score=36.65 Aligned_cols=50 Identities=24% Similarity=0.533 Sum_probs=32.9
Q ss_pred cccccccccccCCCCCCceeccCCCCccccccCCCChHHHhhhccCCCCceeCCCCCCC
Q 002926 283 NYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGE 341 (864)
Q Consensus 283 nyCpVC~K~Y~D~dg~~MVqCD~C~~WfH~eCd~l~dE~y~~~gid~~~~Y~CptCr~~ 341 (864)
..|+||...|.+.+..+++. .|.+.||..|+.. +... ......||.|+..
T Consensus 16 ~~C~IC~~~~~~~~~~~~~~--~CgH~fC~~Ci~~----~~~~---~~~~~~CP~Cr~~ 65 (88)
T 2ct2_A 16 LECPICMESFTEEQLRPKLL--HCGHTICRQCLEK----LLAS---SINGVRCPFCSKI 65 (88)
T ss_dssp CBCTTTCCBCCTTSSCEEEC--SSSCEEEHHHHHH----HHHH---CSSCBCCTTTCCC
T ss_pred CCCccCCccccccCCCeEEC--CCCChhhHHHHHH----HHHc---CCCCcCCCCCCCc
Confidence 46899988887654323322 6899999999542 2211 1236899999975
No 153
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=71.07 E-value=1.5 Score=36.36 Aligned_cols=50 Identities=24% Similarity=0.603 Sum_probs=31.9
Q ss_pred cccccccccccCCCCCCceeccCCCCccccccCCCChHHHhhhccCCCCceeCCCCCCCCcCC
Q 002926 283 NYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGECYQV 345 (864)
Q Consensus 283 nyCpVC~K~Y~D~dg~~MVqCD~C~~WfH~eCd~l~dE~y~~~gid~~~~Y~CptCr~~~~~I 345 (864)
..|+||...|.+... +.--.|.+.||..|+. . |... ...||.|+.....+
T Consensus 16 ~~C~IC~~~~~~~~~---~~~~~C~H~f~~~Ci~---~-~~~~------~~~CP~Cr~~~~~~ 65 (74)
T 2ep4_A 16 ELCAVCLEDFKPRDE---LGICPCKHAFHRKCLI---K-WLEV------RKVCPLCNMPVLQL 65 (74)
T ss_dssp CBCSSSCCBCCSSSC---EEEETTTEEEEHHHHH---H-HHHH------CSBCTTTCCBCSSC
T ss_pred CCCcCCCcccCCCCc---EEEcCCCCEecHHHHH---H-HHHc------CCcCCCcCcccccc
Confidence 468889887765432 2112489999999954 2 2221 24899999765443
No 154
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=71.01 E-value=1.5 Score=48.39 Aligned_cols=55 Identities=25% Similarity=0.561 Sum_probs=36.0
Q ss_pred ccccccccccCCCCCCceecc--CCCCccccccCCCChHHHhhhccCC----CCceeCCCCCCC
Q 002926 284 YCPVCLKVYRDSESTPMVCCD--VCQRWVHCQCDGISDEKYLQFQVDG----NLQYRCPTCRGE 341 (864)
Q Consensus 284 yCpVC~K~Y~D~dg~~MVqCD--~C~~WfH~eCd~l~dE~y~~~gid~----~~~Y~CptCr~~ 341 (864)
-|+||+..+.++...+-..|+ .|.+-||..|+. +-+......+ -..-.||.|+..
T Consensus 310 ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~---kWLrs~~~sRqSFnvi~G~CPyCr~p 370 (381)
T 3k1l_B 310 RCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLE---EWFKTLMDGKTFLEVSFGQCPFCKAK 370 (381)
T ss_dssp SCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGH---HHHHHHHSSSCTTTCCEEECTTTCCE
T ss_pred cCcccceeecCCCCCccccccCCccCCccchHHHH---HHHHhCCCccccccccCCCCCCCCCc
Confidence 588998887665555556788 899999999953 3332221111 113579999964
No 155
>3h8z_A FragIle X mental retardation syndrome-related Pro; tudor domains, FXR2, structura genomics, structural genomics consortium, SGC; 1.92A {Homo sapiens} PDB: 3o8v_A 3kuf_A 2bkd_N*
Probab=70.90 E-value=7.1 Score=37.29 Aligned_cols=53 Identities=17% Similarity=0.197 Sum_probs=39.6
Q ss_pred cccceEEEEecCCC----ceeeeeeEEeecCeeEEEEEecC---CcccceecCceeeEeeeccc
Q 002926 803 AIGKRVEVHQQSDN----SWHKGVVTDTVEGTSTLSITLDD---SRVKTLELGKQGVRFVPQKQ 859 (864)
Q Consensus 803 a~~krvev~~~sd~----~w~~g~v~~~~~~~~~~~v~~d~---~~~~~~~~gk~~vr~~~~~~ 859 (864)
++|-.|||....++ .|..|+|..+.+.. +.|.+++ ---+.++ -+.+|.+++.+
T Consensus 62 ~~gd~VEV~~~~~d~ep~gWw~a~I~~~kg~f--~~V~y~~~~~~~~EiV~--~~rlR~~n~~~ 121 (128)
T 3h8z_A 62 TEGDEVEVYSRANEQEPCGWWLARVRMMKGDF--YVIEYAACDATYNEIVT--LERLRPVNPNP 121 (128)
T ss_dssp CTTCEEEEEECC---CCCEEEEEEEEEEETTE--EEEEETTC----CEEEC--GGGEEECCCCC
T ss_pred CCCCEEEEEecCCCCCcCccEEEEEEEeeCCE--EEEEEcCCCCCcceEEe--hhheEeCCCCC
Confidence 78999999998877 89999999999877 8999666 3345555 45688887653
No 156
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=70.29 E-value=0.84 Score=37.74 Aligned_cols=47 Identities=23% Similarity=0.576 Sum_probs=29.0
Q ss_pred ccccccccccccccCcccCCceeec--CCCCccccccccccCccccccCCCCCcCCCCC
Q 002926 143 TNVMCRLCFVGENEGCERARRMLSC--KSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSC 199 (864)
Q Consensus 143 ~dd~C~vC~~gG~~gs~~~eeLL~C--d~C~raYH~~CL~p~~~~~~~v~~~~W~CpeC 199 (864)
....|.||...+. + .-+.-| .+.-+.||..||..|.... +.+.|+-|
T Consensus 5 ~~~~CrIC~~~~~---~--~l~~PC~C~gs~~~~H~~Cl~~W~~~~-----~~~~C~~C 53 (60)
T 1vyx_A 5 DVPVCWICNEELG---N--ERFRACGCTGELENVHRSCLSTWLTIS-----RNTACQIC 53 (60)
T ss_dssp SCCEETTTTEECS---C--CCCCSCCCSSGGGSCCHHHHHHHHHHH-----TCSBCTTT
T ss_pred CCCEeEEeecCCC---C--ceecCcCCCCchhhhHHHHHHHHHHhC-----CCCccCCC
Confidence 3458999987531 1 123343 3444699999999987532 34555555
No 157
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=70.19 E-value=3.4 Score=31.96 Aligned_cols=47 Identities=34% Similarity=0.742 Sum_probs=31.3
Q ss_pred cccccccccccCCCCCCceeccCCCCccccccCCCChHHHhhhccCCCCceeCCCCCCC
Q 002926 283 NYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGE 341 (864)
Q Consensus 283 nyCpVC~K~Y~D~dg~~MVqCD~C~~WfH~eCd~l~dE~y~~~gid~~~~Y~CptCr~~ 341 (864)
..|+||...|.+.+. .+..-.|...||..|+. . |... ...||.|+..
T Consensus 6 ~~C~IC~~~~~~~~~--~~~~~~CgH~fc~~Ci~---~-~~~~------~~~CP~Cr~~ 52 (55)
T 2ecm_A 6 SGCPICLEDIHTSRV--VAHVLPCGHLLHRTCYE---E-MLKE------GYRCPLCSGP 52 (55)
T ss_dssp CSCTTTCCCCCTTTS--CEEECTTSCEEETTHHH---H-HHHH------TCCCTTSCCS
T ss_pred CcCcccChhhcCCCc--CeEecCCCCcccHHHHH---H-HHHc------CCcCCCCCCc
Confidence 358899887755332 34455689999999954 2 2221 2789999864
No 158
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=69.70 E-value=1.5 Score=36.31 Aligned_cols=37 Identities=24% Similarity=0.768 Sum_probs=25.0
Q ss_pred ccccccccccccccCcccCCceeecCCCCccccccccccCcc
Q 002926 143 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQ 184 (864)
Q Consensus 143 ~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~ 184 (864)
.+..|.||...-. ....+... .|+..||..|+..|..
T Consensus 14 ~~~~C~IC~~~~~----~~~~~~~~-~C~H~f~~~Ci~~~~~ 50 (74)
T 2ep4_A 14 LHELCAVCLEDFK----PRDELGIC-PCKHAFHRKCLIKWLE 50 (74)
T ss_dssp CSCBCSSSCCBCC----SSSCEEEE-TTTEEEEHHHHHHHHH
T ss_pred CCCCCcCCCcccC----CCCcEEEc-CCCCEecHHHHHHHHH
Confidence 4568999997531 11133222 5999999999998764
No 159
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=69.56 E-value=2.5 Score=35.29 Aligned_cols=47 Identities=19% Similarity=0.585 Sum_probs=30.3
Q ss_pred CcccccccccccccccCcccCCceeecCCCCccccccccccCccccccCCCCCcCCCCC
Q 002926 141 SNTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSC 199 (864)
Q Consensus 141 s~~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~~~~~v~~~~W~CpeC 199 (864)
...+..|.||...-. +-+.-..|+..||..|+..+.... +...||.|
T Consensus 12 ~~~~~~C~IC~~~~~-------~p~~~~~CgH~fC~~Ci~~~~~~~-----~~~~CP~C 58 (74)
T 2yur_A 12 IPDELLCLICKDIMT-------DAVVIPCCGNSYCDECIRTALLES-----DEHTCPTC 58 (74)
T ss_dssp SCGGGSCSSSCCCCT-------TCEECSSSCCEECTTHHHHHHHHS-----SSSCCSSS
T ss_pred CCCCCCCcCCChHHh-------CCeEcCCCCCHHHHHHHHHHHHhc-----CCCcCCCC
Confidence 345678999986431 223333499999999998876521 23456665
No 160
>2xdp_A Lysine-specific demethylase 4C; oxidoreductase, histone modification; 1.56A {Homo sapiens}
Probab=68.15 E-value=7.7 Score=36.93 Aligned_cols=54 Identities=19% Similarity=0.215 Sum_probs=40.8
Q ss_pred hhhhHHHHHHhccccccceEEEEecCCCceeeeeeEEeecCeeEEEEEecCCccccee
Q 002926 789 IMDANWILKKLGKDAIGKRVEVHQQSDNSWHKGVVTDTVEGTSTLSITLDDSRVKTLE 846 (864)
Q Consensus 789 ~~d~~~il~~lg~da~~krvev~~~sd~~w~~g~v~~~~~~~~~~~v~~d~~~~~~~~ 846 (864)
|..-+| .+||.-+.|-.|+|.| .||.=+.|+...-. -...+.|.|+||++-+++
T Consensus 54 Ivs~dc--~~~GpP~~G~~V~V~W-~DG~~y~a~f~g~~-~~~~YtV~FeDgs~~~~k 107 (123)
T 2xdp_A 54 IVSRDC--LKLGPPAEGEVVQVKW-PDGKLYGAKYFGSN-IAHMYQVEFEDGSQIAMK 107 (123)
T ss_dssp BCSSCH--HHHCCCCTTCEEEEEC-TTSCEEEEEEEEEE-EEEEEEEECTTSCEEEEE
T ss_pred cccccc--cccCCCCCCCEEEEEc-CCCCEEeEEEeeee-eEEEEEEEECCCCeEEec
Confidence 344445 5679999999999999 77777777765542 234688999999987775
No 161
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=67.70 E-value=2.6 Score=38.57 Aligned_cols=68 Identities=22% Similarity=0.448 Sum_probs=41.0
Q ss_pred ccccccCccccCCCccccccccccccccccccCCCC-CCceeccCCCCccccccCCCChHHHhhhccCCCCceeCCCCCC
Q 002926 262 SVRWFLGYTCCDACGRLFVKGNYCPVCLKVYRDSES-TPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRG 340 (864)
Q Consensus 262 s~rW~~~~~lC~~C~elf~KgnyCpVC~K~Y~D~dg-~~MVqCD~C~~WfH~eCd~l~dE~y~~~gid~~~~Y~CptCr~ 340 (864)
.|.|......|..|...|. ..|++|...+....+ ...+.--.|.+.||..|+. . +.. ....||.||.
T Consensus 30 ~w~~d~~~d~CaIC~~~~~--~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~---~-Wl~------~~~~CP~Cr~ 97 (106)
T 3dpl_R 30 LWAWDIVVDNCAICRNHIM--DLCIECQANQASATSEECTVAWGVCNHAFHFHCIS---R-WLK------TRQVCPLDNR 97 (106)
T ss_dssp EEEESSCSCCCSSSCSCTT--SCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHH---H-HHT------TCSBCSSSCS
T ss_pred EeecCCCCCCCccCChhHh--CcCchhhccccccCCccceEeecccCcEECHHHHH---H-HHH------cCCcCcCCCC
Confidence 4566666677888876553 357777654322111 1123345799999999954 2 221 1468999997
Q ss_pred C
Q 002926 341 E 341 (864)
Q Consensus 341 ~ 341 (864)
.
T Consensus 98 ~ 98 (106)
T 3dpl_R 98 E 98 (106)
T ss_dssp B
T ss_pred c
Confidence 5
No 162
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=67.50 E-value=2.4 Score=49.45 Aligned_cols=84 Identities=20% Similarity=0.335 Sum_probs=25.5
Q ss_pred cccccccccccccCcccCCceeecCCCCccccccccccCcccc----------ccCCCCCcCC---CCCccccccccC--
Q 002926 144 NVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNR----------DLFHWSSWKC---PSCRICEICRRT-- 208 (864)
Q Consensus 144 dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~~~----------~~v~~~~W~C---peCk~C~VCgk~-- 208 (864)
..+|.+|..-= .+-..+-+.|..|+-..|..|.......= .....-.|.= ....+|..|++.
T Consensus 48 p~~C~~C~~~i---~g~~~qg~~C~~C~~~~H~~C~~~v~~~c~~~~~~~~~~~~~~~h~~~~~~~~~~~~C~~C~~~l~ 124 (674)
T 3pfq_A 48 PTFCSHCTDFI---WGFGKQGFQCQVCSFVVHKRCHEFVTFSCPGADKGPASDDPRSKHKFKIHTYSSPTFCDHCGSLLY 124 (674)
T ss_dssp ---------------------------------------------------------CCCCCEECCSSCCCCSSSCSCCB
T ss_pred CCccccccccc---cccCCceeECCCCCCCcChhhcCcCcccCCCcccccccccccCCcceeecCCCCCCCCCccccccc
Confidence 34899998631 11122567899999999999986532100 0000113321 122377778654
Q ss_pred CCCCceeecCCCCCcccccccC
Q 002926 209 GDPNKFMFCRRCDAAYHCYCQH 230 (864)
Q Consensus 209 gd~~~LL~Cd~C~raYH~~CL~ 230 (864)
|-...-++|..|...+|..|..
T Consensus 125 g~~~qg~~C~~C~~~~H~~C~~ 146 (674)
T 3pfq_A 125 GLIHQGMKCDTCMMNVHKRCVM 146 (674)
T ss_dssp BSSSCEECCSSSCCCBCSSTTS
T ss_pred hhhcCccccccCCcchhhhhhh
Confidence 2223568999999999999986
No 163
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=67.35 E-value=1.6 Score=37.39 Aligned_cols=42 Identities=17% Similarity=0.528 Sum_probs=25.4
Q ss_pred ccccccccccccccC-------cccCCceeecCCCCccccccccccCcc
Q 002926 143 TNVMCRLCFVGENEG-------CERARRMLSCKSCGKKYHRNCLKNWAQ 184 (864)
Q Consensus 143 ~dd~C~vC~~gG~~g-------s~~~eeLL~Cd~C~raYH~~CL~p~~~ 184 (864)
.++.|.||...-... ....+..+.-..|+..||..|+..|..
T Consensus 14 ~~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~ 62 (81)
T 2ecl_A 14 ECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVK 62 (81)
T ss_dssp CCSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTT
T ss_pred CCCCCcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHHHHHH
Confidence 345788887643110 001112333347999999999998765
No 164
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=66.45 E-value=2.3 Score=35.41 Aligned_cols=48 Identities=23% Similarity=0.643 Sum_probs=31.9
Q ss_pred ccccccccccccCCCCCCceeccCCCCccccccCCCChHHHhhhccCCCCceeCCCCCCCC
Q 002926 282 GNYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGEC 342 (864)
Q Consensus 282 gnyCpVC~K~Y~D~dg~~MVqCD~C~~WfH~eCd~l~dE~y~~~gid~~~~Y~CptCr~~~ 342 (864)
...|+||...|...+ .+..-.|.+.||..|+.. |... ...||.|+...
T Consensus 23 ~~~C~IC~~~~~~~~---~~~~l~C~H~fh~~Ci~~----w~~~------~~~CP~Cr~~~ 70 (75)
T 1x4j_A 23 QTLCVVCMCDFESRQ---LLRVLPCNHEFHAKCVDK----WLKA------NRTCPICRADS 70 (75)
T ss_dssp CCEETTTTEECCBTC---EEEEETTTEEEETTHHHH----HHHH------CSSCTTTCCCC
T ss_pred CCCCeECCcccCCCC---eEEEECCCCHhHHHHHHH----HHHc------CCcCcCcCCcC
Confidence 346899988776543 344445999999999542 2221 35899999753
No 165
>2xk0_A Polycomb protein PCL; transcription, aromatic CAGE; NMR {Drosophila melanogaster}
Probab=65.89 E-value=10 Score=32.75 Aligned_cols=44 Identities=20% Similarity=0.240 Sum_probs=36.7
Q ss_pred cccccceEEEEecCCCceeeeeeEEeecCeeEEEEEecCCcccceec
Q 002926 801 KDAIGKRVEVHQQSDNSWHKGVVTDTVEGTSTLSITLDDSRVKTLEL 847 (864)
Q Consensus 801 ~da~~krvev~~~sd~~w~~g~v~~~~~~~~~~~v~~d~~~~~~~~~ 847 (864)
+=.+|..|-++| +|+-.+=|+|++...++ .-|.|+|-+.--+++
T Consensus 15 ~~~~geDVL~rw-~DG~fYLGtIVd~~~~~--ClV~FeD~S~~Wv~~ 58 (69)
T 2xk0_A 15 TYALQEDVFIKC-NDGRFYLGTIIDQTSDQ--YLIRFDDQSEQWCEP 58 (69)
T ss_dssp CCCTTCEEEEEC-TTSCEEEEEEEEECSSC--EEEEETTCCEEEECT
T ss_pred ccccCCeEEEEe-cCCCEEEEEEEecCCce--EEEEecCCcceeeeH
Confidence 446889999998 99999999998887777 899999987655554
No 166
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=65.79 E-value=1.5 Score=35.56 Aligned_cols=35 Identities=14% Similarity=0.512 Sum_probs=24.7
Q ss_pred ccccccccccccccCcccCCceeecCCCCccccccccccCcc
Q 002926 143 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQ 184 (864)
Q Consensus 143 ~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~ 184 (864)
.+..|.+|...-. +-.....|+..||..|+..+..
T Consensus 4 ~~~~C~IC~~~~~-------~~~~~~~C~H~fc~~Ci~~~~~ 38 (68)
T 1chc_A 4 VAERCPICLEDPS-------NYSMALPCLHAFCYVCITRWIR 38 (68)
T ss_dssp CCCCCSSCCSCCC-------SCEEETTTTEEESTTHHHHHHH
T ss_pred CCCCCeeCCcccc-------CCcEecCCCCeeHHHHHHHHHh
Confidence 3458999987431 2234457999999999987653
No 167
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=65.67 E-value=1.6 Score=38.80 Aligned_cols=34 Identities=24% Similarity=0.627 Sum_probs=27.2
Q ss_pred cccccccccccccCcccCCceeecCCCCccccccccccCcc
Q 002926 144 NVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQ 184 (864)
Q Consensus 144 dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~ 184 (864)
...|.||...- .+-+.|..|+..||..|+..+..
T Consensus 22 ~~~C~IC~~~~-------~~p~~~~~CgH~FC~~Ci~~~~~ 55 (100)
T 3lrq_A 22 VFRCFICMEKL-------RDARLCPHCSKLCCFSCIRRWLT 55 (100)
T ss_dssp HTBCTTTCSBC-------SSEEECTTTCCEEEHHHHHHHHH
T ss_pred CCCCccCCccc-------cCccccCCCCChhhHHHHHHHHH
Confidence 45899998743 25677889999999999998764
No 168
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=65.42 E-value=2.8 Score=34.62 Aligned_cols=36 Identities=11% Similarity=0.337 Sum_probs=26.1
Q ss_pred cccccccccccccccCcccCCceeecCCCCccccccccccCcc
Q 002926 142 NTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQ 184 (864)
Q Consensus 142 ~~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~ 184 (864)
.....|.||...-. +-+.-..|+..||..|+..+..
T Consensus 13 ~~~~~C~IC~~~~~-------~p~~~~~CgH~fC~~Ci~~~~~ 48 (72)
T 2djb_A 13 TPYILCSICKGYLI-------DATTITECLHTFCKSCIVRHFY 48 (72)
T ss_dssp CGGGSCTTTSSCCS-------SCEECSSSCCEECHHHHHHHHH
T ss_pred CCCCCCCCCChHHH-------CcCEECCCCCHHHHHHHHHHHH
Confidence 45668999986431 3344468999999999987664
No 169
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=65.41 E-value=5.2 Score=33.16 Aligned_cols=49 Identities=20% Similarity=0.459 Sum_probs=29.6
Q ss_pred ccccccccccccccCcccCCceeecCCCCccccccccccCccccccCCCCCcCCCCC
Q 002926 143 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSC 199 (864)
Q Consensus 143 ~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~~~~~v~~~~W~CpeC 199 (864)
.+..|.+|...-. . ..+ -.|+..||..|+..+.............||.|
T Consensus 11 ~~~~C~IC~~~~~----~--p~~--l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~C 59 (79)
T 2egp_A 11 EEVTCPICLELLT----E--PLS--LDCGHSLCRACITVSNKEAVTSMGGKSSCPVC 59 (79)
T ss_dssp CCCEETTTTEECS----S--CCC--CSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSS
T ss_pred cCCCCcCCCcccC----C--eeE--CCCCCHHHHHHHHHHHHhcccCCCCCCcCCCC
Confidence 4568999987431 1 222 27999999999998765321111224556655
No 170
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=64.68 E-value=4.7 Score=32.98 Aligned_cols=46 Identities=22% Similarity=0.690 Sum_probs=29.5
Q ss_pred cccccccccccccccCcccCCceeecCCCCccccccccccCccccccCCCCCcCCCCC
Q 002926 142 NTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSC 199 (864)
Q Consensus 142 ~~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~~~~~v~~~~W~CpeC 199 (864)
.....|.||...-. +..+. .|+..||..|+..+.... .....||.|
T Consensus 18 ~~~~~C~IC~~~~~------~~~~~--~CgH~fC~~Ci~~~~~~~----~~~~~CP~C 63 (73)
T 2ysl_A 18 QEEVICPICLDILQ------KPVTI--DCGHNFCLKCITQIGETS----CGFFKCPLC 63 (73)
T ss_dssp CCCCBCTTTCSBCS------SEEEC--TTCCEEEHHHHHHHCSSS----CSCCCCSSS
T ss_pred ccCCEeccCCcccC------CeEEc--CCCChhhHHHHHHHHHcC----CCCCCCCCC
Confidence 34568999987431 12222 899999999998765411 234556665
No 171
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=64.68 E-value=3.5 Score=33.56 Aligned_cols=47 Identities=28% Similarity=0.669 Sum_probs=30.3
Q ss_pred cccccccccccCCCCCCceeccCCCCccccccCCCChHHHhhhccCCCCceeCCCCCCCC
Q 002926 283 NYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGEC 342 (864)
Q Consensus 283 nyCpVC~K~Y~D~dg~~MVqCD~C~~WfH~eCd~l~dE~y~~~gid~~~~Y~CptCr~~~ 342 (864)
..|+||...|..... +..-.|.+.||..|+. . |... ...||.|+...
T Consensus 15 ~~C~IC~~~~~~~~~---~~~~~C~H~fc~~Ci~---~-~~~~------~~~CP~Cr~~~ 61 (69)
T 2kiz_A 15 EKCTICLSILEEGED---VRRLPCMHLFHQVCVD---Q-WLIT------NKKCPICRVDI 61 (69)
T ss_dssp CSBTTTTBCCCSSSC---EEECTTSCEEEHHHHH---H-HHHH------CSBCTTTCSBS
T ss_pred CCCeeCCccccCCCc---EEEeCCCCHHHHHHHH---H-HHHc------CCCCcCcCccc
Confidence 358888877754332 3334599999999954 2 2221 24699999753
No 172
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=64.57 E-value=3.3 Score=34.11 Aligned_cols=35 Identities=20% Similarity=0.325 Sum_probs=23.9
Q ss_pred cccccccccccccccCcccCCceeecCCCCccccccccccCcc
Q 002926 142 NTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQ 184 (864)
Q Consensus 142 ~~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~ 184 (864)
.....|.||...-. +.+.- .|+..||..|+..+..
T Consensus 13 ~~~~~C~IC~~~~~-------~~~~~-~CgH~fC~~Ci~~~~~ 47 (71)
T 2d8t_A 13 LTVPECAICLQTCV-------HPVSL-PCKHVFCYLCVKGASW 47 (71)
T ss_dssp SSCCBCSSSSSBCS-------SEEEE-TTTEEEEHHHHHHCTT
T ss_pred CCCCCCccCCcccC-------CCEEc-cCCCHHHHHHHHHHHH
Confidence 34568999986431 22222 6999999999987653
No 173
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=64.19 E-value=2.8 Score=36.48 Aligned_cols=49 Identities=22% Similarity=0.552 Sum_probs=30.7
Q ss_pred cccccccccccCCCCCCcee---ccCCCCccccccCCCChHHHhhhccCCCCceeCCCCCCC
Q 002926 283 NYCPVCLKVYRDSESTPMVC---CDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGE 341 (864)
Q Consensus 283 nyCpVC~K~Y~D~dg~~MVq---CD~C~~WfH~eCd~l~dE~y~~~gid~~~~Y~CptCr~~ 341 (864)
..|.||...|.+.+ +++. |....++||..|+. . +.... ....|+.|+..
T Consensus 16 ~~C~IC~~~~~~~~--~l~~pC~C~Gs~h~fH~~Cl~---~-Wl~~~----~~~~CplCr~~ 67 (80)
T 2d8s_A 16 DICRICHCEGDDES--PLITPCHCTGSLHFVHQACLQ---Q-WIKSS----DTRCCELCKYE 67 (80)
T ss_dssp CCCSSSCCCCCSSS--CEECSSSCCSSSCCEETTHHH---H-HHHHH----CCSBCSSSCCB
T ss_pred CCCeEcCccccCCC--eeEeccccCCcCCeeCHHHHH---H-HHhhC----CCCCCCCCCCe
Confidence 46888987775433 3442 33445999999954 2 32221 24689999965
No 174
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=62.15 E-value=2.1 Score=34.52 Aligned_cols=42 Identities=24% Similarity=0.608 Sum_probs=27.4
Q ss_pred cccccccccccccccCcccCCceeecCCCCccccccccccCcc
Q 002926 142 NTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQ 184 (864)
Q Consensus 142 ~~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~ 184 (864)
.....|.||...-... ......+.-..|+..||..|+..+..
T Consensus 13 ~~~~~C~IC~~~~~~~-~~~~~~~~~~~CgH~fc~~Ci~~~~~ 54 (69)
T 2ea6_A 13 SGTVSCPICMDGYSEI-VQNGRLIVSTECGHVFCSQCLRDSLK 54 (69)
T ss_dssp TCCCCCTTTCCCHHHH-TTTTCCEEECSSSCEEEHHHHHHHHH
T ss_pred CCCCCCcccCcccccc-ccccCCeEeCCCCChhcHHHHHHHHH
Confidence 3456899998742110 00123445568999999999998764
No 175
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=61.46 E-value=2.4 Score=40.68 Aligned_cols=35 Identities=17% Similarity=0.563 Sum_probs=26.4
Q ss_pred ccccccccccccccCcccCCceeecCCCCccccccccccCcc
Q 002926 143 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQ 184 (864)
Q Consensus 143 ~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~ 184 (864)
....|.||...-. +-+.+..|+..||..|+..+..
T Consensus 53 ~~~~C~IC~~~~~-------~p~~~~~CgH~fC~~Ci~~~~~ 87 (165)
T 2ckl_B 53 SELMCPICLDMLK-------NTMTTKECLHRFCADCIITALR 87 (165)
T ss_dssp HHHBCTTTSSBCS-------SEEEETTTCCEEEHHHHHHHHH
T ss_pred CCCCCcccChHhh-------CcCEeCCCCChhHHHHHHHHHH
Confidence 4568999986431 4455568999999999998654
No 176
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=61.30 E-value=4.9 Score=33.46 Aligned_cols=49 Identities=20% Similarity=0.502 Sum_probs=30.0
Q ss_pred cccccccccccccccCcccCCceeecCCCCccccccccccCccccccCCCCCcCCCCC
Q 002926 142 NTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSC 199 (864)
Q Consensus 142 ~~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~~~~~v~~~~W~CpeC 199 (864)
.....|.+|...-. ... . ..|+..||..|+..+..... .......||.|
T Consensus 17 ~~~~~C~IC~~~~~------~p~-~-~~CgH~fC~~Ci~~~~~~~~-~~~~~~~CP~C 65 (85)
T 2ecw_A 17 KEEVTCPICLELLK------EPV-S-ADCNHSFCRACITLNYESNR-NTDGKGNCPVC 65 (85)
T ss_dssp CTTTSCTTTCSCCS------SCE-E-CTTSCCBCHHHHHHHHHHSB-CTTSCBCCTTT
T ss_pred ccCCCCcCCChhhC------cce-e-CCCCCHHHHHHHHHHHHhcc-CCCCCCCCCCC
Confidence 34568999986431 122 2 26999999999987654311 11235667765
No 177
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=59.26 E-value=2 Score=40.19 Aligned_cols=17 Identities=24% Similarity=0.946 Sum_probs=0.0
Q ss_pred CCCCccccccccccCcc
Q 002926 168 KSCGKKYHRNCLKNWAQ 184 (864)
Q Consensus 168 d~C~raYH~~CL~p~~~ 184 (864)
..|+..||..|+..|+.
T Consensus 82 ~~C~H~FH~~CI~~Wl~ 98 (117)
T 4a0k_B 82 GVCNHAFHFHCISRWLK 98 (117)
T ss_dssp -----------------
T ss_pred CCcCceEcHHHHHHHHH
Confidence 37999999999998865
No 178
>1b8t_A Protein (CRP1); LIM domain, muscle differentiation, contractIle; NMR {Gallus gallus} SCOP: g.39.1.3 g.39.1.3 g.39.1.3 g.39.1.3 PDB: 1ibi_A 1qli_A 1cxx_A 1ctl_A 2o13_A
Probab=58.84 E-value=4.2 Score=40.02 Aligned_cols=37 Identities=24% Similarity=0.514 Sum_probs=18.7
Q ss_pred eeecCCCCcccc-ccccccCccccccCCCCCcCCCCCccccccccCC
Q 002926 164 MLSCKSCGKKYH-RNCLKNWAQNRDLFHWSSWKCPSCRICEICRRTG 209 (864)
Q Consensus 164 LL~Cd~C~raYH-~~CL~p~~~~~~~v~~~~W~CpeCk~C~VCgk~g 209 (864)
.-.|..|++... ..-+. .....|. ++|-.|..|+.+-
T Consensus 7 ~~~C~~C~~~I~~~~~v~--------a~g~~wH-~~CF~C~~C~~~L 44 (192)
T 1b8t_A 7 GKKCGVCQKAVYFAEEVQ--------CEGSSFH-KSCFLCMVCKKNL 44 (192)
T ss_dssp CEECTTTCCEECSSCCEE--------ETTEEEC-TTTCBCTTTCCBC
T ss_pred CCcCccCCCeecceeEEE--------eCCceec-CCCCcCcccCCcC
Confidence 456777776543 22111 0122343 5676677776553
No 179
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=56.92 E-value=5.7 Score=31.76 Aligned_cols=46 Identities=22% Similarity=0.690 Sum_probs=30.8
Q ss_pred cccccccccccccccCcccCCceeecCCCCccccccccccCccccccCCCCCcCCCCC
Q 002926 142 NTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSC 199 (864)
Q Consensus 142 ~~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~~~~~v~~~~W~CpeC 199 (864)
..+..|.||...-. +..+. .|+..||..|+..+.... .....||.|
T Consensus 18 ~~~~~C~IC~~~~~------~p~~~--~CgH~fC~~Ci~~~~~~~----~~~~~CP~C 63 (63)
T 2ysj_A 18 QEEVICPICLDILQ------KPVTI--DCGHNFCLKCITQIGETS----CGFFKCPLC 63 (63)
T ss_dssp CCCCBCTTTCSBCS------SCEEC--TTSSEECHHHHHHHHHHC----SSCCCCSCC
T ss_pred ccCCCCCcCCchhC------CeEEe--CCCCcchHHHHHHHHHcC----CCCCcCcCC
Confidence 34568999986431 13333 899999999999876421 235578776
No 180
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=56.83 E-value=5 Score=35.68 Aligned_cols=27 Identities=22% Similarity=0.543 Sum_probs=22.1
Q ss_pred ccccCccccCCCccccccccccccccc
Q 002926 264 RWFLGYTCCDACGRLFVKGNYCPVCLK 290 (864)
Q Consensus 264 rW~~~~~lC~~C~elf~KgnyCpVC~K 290 (864)
.|...+..|..|...|...-|||-|..
T Consensus 13 ~~~~~~~~C~~C~~~~~~~afCPeCgq 39 (81)
T 2jrp_A 13 ERNGDTAHCETCAKDFSLQALCPDCRQ 39 (81)
T ss_dssp EECSSEEECTTTCCEEEEEEECSSSCS
T ss_pred ccCCCceECccccccCCCcccCcchhh
Confidence 566667789999998888889999865
No 181
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=56.81 E-value=12 Score=33.34 Aligned_cols=46 Identities=22% Similarity=0.400 Sum_probs=30.9
Q ss_pred cccccccccccCCCCCCceeccCCCCccccccCCCChHHHhhhccCCCCceeCCCCCCCCc
Q 002926 283 NYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGECY 343 (864)
Q Consensus 283 nyCpVC~K~Y~D~dg~~MVqCD~C~~WfH~eCd~l~dE~y~~~gid~~~~Y~CptCr~~~~ 343 (864)
..|++|...+.+ .+....|.+.||..|+. . +.. ....||.|+....
T Consensus 16 ~~C~IC~~~~~~-----p~~~~~CgH~fC~~Ci~---~-~~~------~~~~CP~Cr~~~~ 61 (108)
T 2ckl_A 16 LMCVLCGGYFID-----ATTIIECLHSFCKTCIV---R-YLE------TSKYCPICDVQVH 61 (108)
T ss_dssp TBCTTTSSBCSS-----EEEETTTCCEEEHHHHH---H-HHT------SCSBCTTTCCBSC
T ss_pred CCCccCChHHhC-----cCEeCCCCChhhHHHHH---H-HHH------hCCcCcCCCcccc
Confidence 458888877643 24455799999999954 1 111 1378999997643
No 182
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=56.68 E-value=4.6 Score=34.07 Aligned_cols=49 Identities=22% Similarity=0.539 Sum_probs=29.6
Q ss_pred ccccccccccccccCcccCCceeecCCCCccccccccccCccccccCCCCCcCCCCC
Q 002926 143 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSC 199 (864)
Q Consensus 143 ~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~~~~~v~~~~W~CpeC 199 (864)
....|.+|...-... .....--.|+..||..|+..+.... .....||.|
T Consensus 14 ~~~~C~IC~~~~~~~----~~~~~~~~CgH~fC~~Ci~~~~~~~----~~~~~CP~C 62 (88)
T 2ct2_A 14 EVLECPICMESFTEE----QLRPKLLHCGHTICRQCLEKLLASS----INGVRCPFC 62 (88)
T ss_dssp SCCBCTTTCCBCCTT----SSCEEECSSSCEEEHHHHHHHHHHC----SSCBCCTTT
T ss_pred CCCCCccCCcccccc----CCCeEECCCCChhhHHHHHHHHHcC----CCCcCCCCC
Confidence 456899998643110 1112222799999999999876432 124566665
No 183
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=56.28 E-value=4.7 Score=32.38 Aligned_cols=49 Identities=27% Similarity=0.672 Sum_probs=32.1
Q ss_pred cccccccccccCC-CCCCceeccCCCCccccccCCCChHHHhhhccCCCCceeCCCCCCC
Q 002926 283 NYCPVCLKVYRDS-ESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGE 341 (864)
Q Consensus 283 nyCpVC~K~Y~D~-dg~~MVqCD~C~~WfH~eCd~l~dE~y~~~gid~~~~Y~CptCr~~ 341 (864)
..|+||...|.+. .....+.--.|.+.||..|+. . +... ...||.|+..
T Consensus 16 ~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~---~-~~~~------~~~CP~Cr~~ 65 (69)
T 2ea6_A 16 VSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLR---D-SLKN------ANTCPTCRKK 65 (69)
T ss_dssp CCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHH---H-HHHH------CSSCTTTCCC
T ss_pred CCCcccCccccccccccCCeEeCCCCChhcHHHHH---H-HHHc------CCCCCCCCCc
Confidence 4588888877543 223344556799999999954 2 2211 3589999965
No 184
>2jtn_A LIM domain-binding protein 1, LIM/homeobox protein LHX3; intramolecular (fusion) protein-protein complex, protein binding/transcription complex; NMR {Mus musculus}
Probab=56.24 E-value=7.4 Score=37.97 Aligned_cols=15 Identities=13% Similarity=0.255 Sum_probs=8.5
Q ss_pred ccccCCCcccCCCCC
Q 002926 241 YLCPKHTKCHSCGSN 255 (864)
Q Consensus 241 W~CP~C~~C~~CG~~ 255 (864)
++.+.|..|..|+..
T Consensus 142 ~~H~~CF~C~~C~~~ 156 (182)
T 2jtn_A 142 VYHLHCFACVVCKRQ 156 (182)
T ss_dssp ECCTTTCCCTTTCCC
T ss_pred CEEeCCCcCCCCCCC
Confidence 334566666666554
No 185
>2cup_A Skeletal muscle LIM-protein 1; four and half LIM domains protein 1, LIM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 g.39.1.3
Probab=55.41 E-value=16 Score=31.74 Aligned_cols=44 Identities=16% Similarity=0.329 Sum_probs=19.5
Q ss_pred CCcccCCCCCCCCCCCccccccCccccCCCccccccccccccccccc
Q 002926 246 HTKCHSCGSNVPGNGLSVRWFLGYTCCDACGRLFVKGNYCPVCLKVY 292 (864)
Q Consensus 246 C~~C~~CG~~~pgk~ls~rW~~~~~lC~~C~elf~KgnyCpVC~K~Y 292 (864)
|..|..|+....+. ..-...+.++|..|.... .+..|..|.+..
T Consensus 33 CF~C~~C~~~L~~~--~~~~~~g~~yC~~cy~~~-~~~~C~~C~~~I 76 (101)
T 2cup_A 33 CFRCAKCLHPLANE--TFVAKDNKILCNKCTTRE-DSPKCKGCFKAI 76 (101)
T ss_dssp TCCCSSSCCCTTSS--CCEEETTEEECHHHHTTC-CCCBCSSSCCBC
T ss_pred CCcccccCCCCCcC--eeECcCCEEEChhHhhhh-cCCccccCCCcc
Confidence 33366676554321 111223456666554211 123455665544
No 186
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=54.90 E-value=6.3 Score=45.93 Aligned_cols=30 Identities=23% Similarity=0.557 Sum_probs=0.0
Q ss_pred cccccccC--CCCCceeecCCCCCcccccccC
Q 002926 201 ICEICRRT--GDPNKFMFCRRCDAAYHCYCQH 230 (864)
Q Consensus 201 ~C~VCgk~--gd~~~LL~Cd~C~raYH~~CL~ 230 (864)
+|.+|+.- |-...-++|..|+-..|..|..
T Consensus 50 ~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~ 81 (674)
T 3pfq_A 50 FCSHCTDFIWGFGKQGFQCQVCSFVVHKRCHE 81 (674)
T ss_dssp --------------------------------
T ss_pred ccccccccccccCCceeECCCCCCCcChhhcC
Confidence 56666542 1112458899999999999987
No 187
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=54.28 E-value=7 Score=30.38 Aligned_cols=45 Identities=20% Similarity=0.753 Sum_probs=29.4
Q ss_pred ccccccccccccccCcccCCceeecCCCCccccccccccCccccccCCCCCcCCCCC
Q 002926 143 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSC 199 (864)
Q Consensus 143 ~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~~~~~v~~~~W~CpeC 199 (864)
....|.||...-. . ..+ ..|+..||..|+..+.... .....||.|
T Consensus 14 ~~~~C~IC~~~~~----~--p~~--~~CgH~fC~~Ci~~~~~~~----~~~~~CP~C 58 (58)
T 2ecj_A 14 VEASCSVCLEYLK----E--PVI--IECGHNFCKACITRWWEDL----ERDFPCPVC 58 (58)
T ss_dssp CCCBCSSSCCBCS----S--CCC--CSSCCCCCHHHHHHHTTSS----CCSCCCSCC
T ss_pred cCCCCccCCcccC----c--cEe--CCCCCccCHHHHHHHHHhc----CCCCCCCCC
Confidence 4568999986431 1 222 3799999999998764321 245677766
No 188
>2hqx_A P100 CO-activator tudor domain; human P100 tudor domain, proteolytic fragment, PSI, structural genomics; 1.42A {Homo sapiens} SCOP: b.34.9.1 PDB: 2hqe_A 3omc_A* 3omg_A* 2o4x_A 2e6n_A 2o4x_B
Probab=53.76 E-value=15 Score=37.27 Aligned_cols=51 Identities=12% Similarity=0.136 Sum_probs=39.2
Q ss_pred cccceEEEEecCCCceeeeeeEEeecCeeEEEEEecC-CcccceecCceeeEeeec
Q 002926 803 AIGKRVEVHQQSDNSWHKGVVTDTVEGTSTLSITLDD-SRVKTLELGKQGVRFVPQ 857 (864)
Q Consensus 803 a~~krvev~~~sd~~w~~g~v~~~~~~~~~~~v~~d~-~~~~~~~~gk~~vr~~~~ 857 (864)
.+|.-+-+... ||.|+.++|+.|..+. ++.|.|-| |..+++.+ ..+|.||.
T Consensus 67 ~~G~~c~a~~~-d~~wyRa~V~~~~~~~-~~~V~~vDyGn~~~v~~--~~lr~l~~ 118 (246)
T 2hqx_A 67 RRGEFCIAKFV-DGEWYRARVEKVESPA-KIHVFYIDYGNREVLPS--TRLGTLSP 118 (246)
T ss_dssp CTTCEEEEECT-TSCEEEEEEEEEEETT-EEEEEETTTCCEEEECG--GGEECCCG
T ss_pred CCCCEEEEEcC-CCCEEEEEEEEEcCCC-eEEEEEEeCCCeEEEeH--HHhhcCCH
Confidence 47888888876 9999999999998643 48888655 99988854 34666654
No 189
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=52.73 E-value=2.4 Score=34.54 Aligned_cols=41 Identities=24% Similarity=0.615 Sum_probs=27.2
Q ss_pred ccccccccccccccCcccCCceeecCCCCccccccccccCcc
Q 002926 143 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQ 184 (864)
Q Consensus 143 ~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~ 184 (864)
.+..|.||...-... ......+....|+..||..|+..+..
T Consensus 9 ~~~~C~IC~~~~~~~-~~~~~~~~~~~CgH~fc~~Ci~~~~~ 49 (71)
T 3ng2_A 9 GTVSCPICMDGYSEI-VQNGRLIVSTECGHVFCSQCLRDSLK 49 (71)
T ss_dssp TCCBCTTTCCBHHHH-HTTTCCEEECTTSCEEEHHHHHHHHH
T ss_pred CCCCCcccChhhhcc-ccccCCeEeCCCCChHhHHHHHHHHH
Confidence 455899999642110 00124456678999999999998764
No 190
>3fdr_A Tudor and KH domain-containing protein; TDRD2, structural genomics, structural genomics consortium, SGC, alternative splicing, RNA-binding; 1.75A {Homo sapiens} SCOP: b.34.9.1
Probab=52.73 E-value=19 Score=31.61 Aligned_cols=52 Identities=21% Similarity=0.324 Sum_probs=39.6
Q ss_pred cccceEEEEecCCCceeeeeeEEeecCeeEEEEEe-cCCcccceecCceeeEeeec
Q 002926 803 AIGKRVEVHQQSDNSWHKGVVTDTVEGTSTLSITL-DDSRVKTLELGKQGVRFVPQ 857 (864)
Q Consensus 803 a~~krvev~~~sd~~w~~g~v~~~~~~~~~~~v~~-d~~~~~~~~~gk~~vr~~~~ 857 (864)
.+|.-+-+..+.||.|+.++|..|.+.. ++.|.| |=|..+++.+ ..+|.|+.
T Consensus 29 ~~G~~c~a~~~~d~~wyRA~I~~~~~~~-~~~V~fvDyGn~e~v~~--~~lr~l~~ 81 (94)
T 3fdr_A 29 HVGDIVAAPLPTNGSWYRARVLGTLENG-NLDLYFVDFGDNGDCPL--KDLRALRS 81 (94)
T ss_dssp CTTCEEEEEETTTTEEEEEEEEEECTTS-CEEEEETTTCCEEEECG--GGCEECCG
T ss_pred CCCCEEEEEECCCCeEEEEEEEEECCCC-eEEEEEEcCCCeEEEEH--HHhhhcCH
Confidence 5788998988889999999999997532 366665 5588887764 45777664
No 191
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=52.66 E-value=4.3 Score=32.92 Aligned_cols=49 Identities=27% Similarity=0.672 Sum_probs=32.5
Q ss_pred cccccccccccCC-CCCCceeccCCCCccccccCCCChHHHhhhccCCCCceeCCCCCCC
Q 002926 283 NYCPVCLKVYRDS-ESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGE 341 (864)
Q Consensus 283 nyCpVC~K~Y~D~-dg~~MVqCD~C~~WfH~eCd~l~dE~y~~~gid~~~~Y~CptCr~~ 341 (864)
..|+||...|.+. .....+..-.|.+.||..|+. . +... ...||.|+..
T Consensus 11 ~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~---~-~~~~------~~~CP~Cr~~ 60 (71)
T 3ng2_A 11 VSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLR---D-SLKN------ANTCPTCRKK 60 (71)
T ss_dssp CBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHH---H-HHHH------CSBCTTTCCB
T ss_pred CCCcccChhhhccccccCCeEeCCCCChHhHHHHH---H-HHHc------CCCCCCCCCc
Confidence 3588998877542 223445566799999999954 2 2211 2589999975
No 192
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=52.48 E-value=5.4 Score=33.59 Aligned_cols=34 Identities=12% Similarity=0.321 Sum_probs=24.1
Q ss_pred ccccccccccccccCcccCCceeecCCCCccccccccccCcc
Q 002926 143 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQ 184 (864)
Q Consensus 143 ~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~ 184 (864)
....|.||...-. +-+. ..|+..||..|+..+..
T Consensus 14 ~~~~C~IC~~~~~-------~p~~-~~CgH~fC~~Ci~~~~~ 47 (81)
T 2csy_A 14 IPFRCFICRQAFQ-------NPVV-TKCRHYFCESCALEHFR 47 (81)
T ss_dssp CCSBCSSSCSBCC-------SEEE-CTTSCEEEHHHHHHHHH
T ss_pred CCCCCcCCCchhc-------CeeE-ccCCCHhHHHHHHHHHH
Confidence 4458999986431 2222 48999999999988664
No 193
>2rgt_A Fusion of LIM/homeobox protein LHX3, linker, INSU enhancer protein ISL-1; protein-protein complex, LIM domain, Zn finger, activator, D binding; 2.05A {Mus musculus} PDB: 3mmk_A
Probab=52.34 E-value=4.2 Score=39.27 Aligned_cols=8 Identities=38% Similarity=0.604 Sum_probs=5.7
Q ss_pred cccccccc
Q 002926 145 VMCRLCFV 152 (864)
Q Consensus 145 d~C~vC~~ 152 (864)
..|..|..
T Consensus 7 ~~C~~C~~ 14 (169)
T 2rgt_A 7 PMCAGCDQ 14 (169)
T ss_dssp CBBSSSSS
T ss_pred CccccCCC
Confidence 47888875
No 194
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=52.31 E-value=9.6 Score=36.43 Aligned_cols=45 Identities=27% Similarity=0.667 Sum_probs=31.7
Q ss_pred ccccccccccCCCCCCceeccCCCCccccccCCCChHHHhhhccCCCCceeCCCCCCCC
Q 002926 284 YCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGEC 342 (864)
Q Consensus 284 yCpVC~K~Y~D~dg~~MVqCD~C~~WfH~eCd~l~dE~y~~~gid~~~~Y~CptCr~~~ 342 (864)
.|+||...+.+ .+.+..|.+.||..|+.. +.. .....||.|+...
T Consensus 56 ~C~IC~~~~~~-----p~~~~~CgH~fC~~Ci~~----~~~-----~~~~~CP~Cr~~~ 100 (165)
T 2ckl_B 56 MCPICLDMLKN-----TMTTKECLHRFCADCIIT----ALR-----SGNKECPTCRKKL 100 (165)
T ss_dssp BCTTTSSBCSS-----EEEETTTCCEEEHHHHHH----HHH-----TTCCBCTTTCCBC
T ss_pred CCcccChHhhC-----cCEeCCCCChhHHHHHHH----HHH-----hCcCCCCCCCCcC
Confidence 59999877654 355568999999999541 221 1257899999754
No 195
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=52.15 E-value=4 Score=34.01 Aligned_cols=50 Identities=20% Similarity=0.413 Sum_probs=30.8
Q ss_pred cccccccccccCCCCCCceeccCCCCccccccCCCChHHHhhhccCCCCceeCCCCCCCC
Q 002926 283 NYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGEC 342 (864)
Q Consensus 283 nyCpVC~K~Y~D~dg~~MVqCD~C~~WfH~eCd~l~dE~y~~~gid~~~~Y~CptCr~~~ 342 (864)
..|+||...|.+. .++ .|.+.||..|+.. +............||.|+...
T Consensus 20 ~~C~IC~~~~~~p---~~~---~CgH~fC~~Ci~~----~~~~~~~~~~~~~CP~Cr~~~ 69 (85)
T 2ecv_A 20 VTCPICLELLTQP---LSL---DCGHSFCQACLTA----NHKKSMLDKGESSCPVCRISY 69 (85)
T ss_dssp CCCTTTCSCCSSC---BCC---SSSCCBCTTHHHH----HHHHHHHTTSCCCCTTTCCSS
T ss_pred CCCCCCCcccCCc---eeC---CCCCHHHHHHHHH----HHHHhhcCCCCCcCCCCCCcc
Confidence 4588888776542 122 6899999999642 111111123368999999753
No 196
>2m0o_A PHD finger protein 1; tudor domain, H3K36ME3 binding, peptide binding protein; HET: M3L; NMR {Homo sapiens}
Probab=52.06 E-value=14 Score=32.65 Aligned_cols=41 Identities=12% Similarity=0.117 Sum_probs=34.2
Q ss_pred cccccceEEEEecCCCceeeeeeEEeecCeeEEEEEecCCcc
Q 002926 801 KDAIGKRVEVHQQSDNSWHKGVVTDTVEGTSTLSITLDDSRV 842 (864)
Q Consensus 801 ~da~~krvev~~~sd~~w~~g~v~~~~~~~~~~~v~~d~~~~ 842 (864)
+=.+|.-|-++| +|+..+=|+|..|-.-+-+.-|.|+|+..
T Consensus 26 ~f~eGeDVLarw-sDGlfYLGTI~kV~~~~e~ClV~F~D~S~ 66 (79)
T 2m0o_A 26 RLWEGQDVLARW-TDGLLYLGTIKKVDSAREVCLVQFEDDSQ 66 (79)
T ss_dssp CCCTTCEEEBCC-TTSCCCEEEEEEEETTTTEEEEEETTSCE
T ss_pred eeccCCEEEEEe-cCCCEEeEEEEEeccCCCEEEEEEcCCCe
Confidence 445677888999 99999999999997655568899999875
No 197
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=52.00 E-value=4.5 Score=35.01 Aligned_cols=43 Identities=23% Similarity=0.434 Sum_probs=27.6
Q ss_pred cccccccCCCCCceeecCCCCCcccccccCCCCcCCCCCCccccCCC
Q 002926 201 ICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHT 247 (864)
Q Consensus 201 ~C~VCgk~gd~~~LL~Cd~C~raYH~~CL~Ppl~svP~g~W~CP~C~ 247 (864)
.|.+|.....+ -+.|..|...||..|+..-+... ..-.||.|.
T Consensus 17 ~C~IC~~~i~~--g~~C~~C~h~fH~~Ci~kWl~~~--~~~~CP~Cr 59 (74)
T 2ct0_A 17 ICNICHSLLIQ--GQSCETCGIRMHLPCVAKYFQSN--AEPRCPHCN 59 (74)
T ss_dssp BCSSSCCBCSS--SEECSSSCCEECHHHHHHHSTTC--SSCCCTTTC
T ss_pred cCcchhhHccc--CCccCCCCchhhHHHHHHHHHhc--CCCCCCCCc
Confidence 45666654432 35788999999999998544322 124577664
No 198
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=51.92 E-value=6.2 Score=31.92 Aligned_cols=34 Identities=15% Similarity=0.471 Sum_probs=24.1
Q ss_pred ccccccccccccccCcccCCceeecCCCCccccccccccCcc
Q 002926 143 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQ 184 (864)
Q Consensus 143 ~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~ 184 (864)
....|.+|...-. . ..+ ..|+..||..|+..+..
T Consensus 14 ~~~~C~IC~~~~~----~--p~~--~~CgH~fC~~Ci~~~~~ 47 (66)
T 2ecy_A 14 DKYKCEKCHLVLC----S--PKQ--TECGHRFCESCMAALLS 47 (66)
T ss_dssp CCEECTTTCCEES----S--CCC--CSSSCCCCHHHHHHHHT
T ss_pred cCCCCCCCChHhc----C--eeE--CCCCCHHHHHHHHHHHH
Confidence 4568999986431 1 222 38999999999997653
No 199
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=51.28 E-value=15 Score=31.41 Aligned_cols=46 Identities=24% Similarity=0.540 Sum_probs=29.4
Q ss_pred ccccccccccCCCCCCceeccCCCCccccccCCCChHHHhhhccCCCCceeCCCCCCCC
Q 002926 284 YCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGEC 342 (864)
Q Consensus 284 yCpVC~K~Y~D~dg~~MVqCD~C~~WfH~eCd~l~dE~y~~~gid~~~~Y~CptCr~~~ 342 (864)
.|++|...+.+. +.-..|.+.|+..|+. ..+.. ...+.||.|+...
T Consensus 15 ~C~IC~~~~~~p-----~~~~~CgH~fC~~Ci~---~~~~~-----~~~~~CP~Cr~~~ 60 (92)
T 3ztg_A 15 LCLICKDIMTDA-----VVIPCCGNSYCDECIR---TALLE-----SDEHTCPTCHQND 60 (92)
T ss_dssp EETTTTEECSSC-----EECTTTCCEECHHHHH---HHHHH-----CTTCCCTTTCCSS
T ss_pred CCCCCChhhcCc-----eECCCCCCHHHHHHHH---HHHHh-----cCCCcCcCCCCcC
Confidence 588888776532 2333389999999954 22211 2258999999764
No 200
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=50.71 E-value=8.3 Score=34.58 Aligned_cols=44 Identities=18% Similarity=0.477 Sum_probs=29.5
Q ss_pred cccccccccccccccCcccCCceeecCCCCccccccccccCccccccCCCCCcCCCCC
Q 002926 142 NTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSC 199 (864)
Q Consensus 142 ~~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~~~~~v~~~~W~CpeC 199 (864)
..+..|.||...-. ...+. .|+..||..|+..+.. .+...||.|
T Consensus 13 ~~~~~C~iC~~~~~------~p~~~--~CgH~fC~~Ci~~~~~------~~~~~CP~C 56 (115)
T 3l11_A 13 LSECQCGICMEILV------EPVTL--PCNHTLCKPCFQSTVE------KASLCCPFC 56 (115)
T ss_dssp HHHHBCTTTCSBCS------SCEEC--TTSCEECHHHHCCCCC------TTTSBCTTT
T ss_pred CCCCCCccCCcccC------ceeEc--CCCCHHhHHHHHHHHh------HCcCCCCCC
Confidence 34568999986421 12332 7999999999987653 234567766
No 201
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=50.48 E-value=5.3 Score=41.45 Aligned_cols=44 Identities=27% Similarity=0.702 Sum_probs=31.2
Q ss_pred cccccccccccccCcccCCceeecCCCCccccccccccCccccccCCCCCcCCCCC
Q 002926 144 NVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSC 199 (864)
Q Consensus 144 dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~~~~~v~~~~W~CpeC 199 (864)
-..|.+|..--. .-+.|..|+..||..|+.-+... ...-.||.|
T Consensus 180 i~~C~iC~~iv~-------~g~~C~~C~~~~H~~C~~~~~~~-----~~~~~CP~C 223 (238)
T 3nw0_A 180 VKICNICHSLLI-------QGQSCETCGIRMHLPCVAKYFQS-----NAEPRCPHC 223 (238)
T ss_dssp CCBCTTTCSBCS-------SCEECSSSCCEECHHHHHHHTTT-----CSSCBCTTT
T ss_pred CCcCcchhhHHh-------CCcccCccChHHHHHHHHHHHHh-----CCCCCCCCC
Confidence 458999997432 34789999999999999875432 123456655
No 202
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=49.39 E-value=6.7 Score=32.58 Aligned_cols=49 Identities=20% Similarity=0.559 Sum_probs=29.4
Q ss_pred cccccccccccccccCcccCCceeecCCCCccccccccccCccccccCCCCCcCCCCC
Q 002926 142 NTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSC 199 (864)
Q Consensus 142 ~~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~~~~~v~~~~W~CpeC 199 (864)
.....|.+|...-. . ..+ -.|+..||..|+..+..... .......||.|
T Consensus 17 ~~~~~C~IC~~~~~----~--p~~--~~CgH~fC~~Ci~~~~~~~~-~~~~~~~CP~C 65 (85)
T 2ecv_A 17 KEEVTCPICLELLT----Q--PLS--LDCGHSFCQACLTANHKKSM-LDKGESSCPVC 65 (85)
T ss_dssp CCCCCCTTTCSCCS----S--CBC--CSSSCCBCTTHHHHHHHHHH-HTTSCCCCTTT
T ss_pred cCCCCCCCCCcccC----C--cee--CCCCCHHHHHHHHHHHHHhh-cCCCCCcCCCC
Confidence 34568999987431 1 222 27999999999987654210 01234566665
No 203
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=49.38 E-value=4 Score=38.19 Aligned_cols=68 Identities=22% Similarity=0.434 Sum_probs=4.2
Q ss_pred ccccccCccccCCCccccccccccccccccccCCCCC-CceeccCCCCccccccCCCChHHHhhhccCCCCceeCCCCCC
Q 002926 262 SVRWFLGYTCCDACGRLFVKGNYCPVCLKVYRDSEST-PMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRG 340 (864)
Q Consensus 262 s~rW~~~~~lC~~C~elf~KgnyCpVC~K~Y~D~dg~-~MVqCD~C~~WfH~eCd~l~dE~y~~~gid~~~~Y~CptCr~ 340 (864)
.|.|......|..|...|. ..|++|.-.+....+. ..+.--.|...||..|+.. +.. ....||.||.
T Consensus 41 ~w~wd~~~d~CaICl~~~~--~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~----Wl~------~~~~CP~Cr~ 108 (117)
T 4a0k_B 41 LWAWDIVVDNCAICRNHIM--DLCIECQANQASATSEECTVAWGVCNHAFHFHCISR----WLK------TRQVCPLDNR 108 (117)
T ss_dssp EEEECCCC------------------------------------------------------------------------
T ss_pred EEeecCCCCcCeECChhhc--CcChhhhcccccccccccccccCCcCceEcHHHHHH----HHH------cCCcCCCCCC
Confidence 3455555556666665442 2455554432111111 1222346999999999662 111 1458999997
Q ss_pred C
Q 002926 341 E 341 (864)
Q Consensus 341 ~ 341 (864)
.
T Consensus 109 ~ 109 (117)
T 4a0k_B 109 E 109 (117)
T ss_dssp -
T ss_pred e
Confidence 5
No 204
>1weq_A PHD finger protein 7; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=49.32 E-value=11 Score=33.79 Aligned_cols=35 Identities=29% Similarity=0.805 Sum_probs=27.5
Q ss_pred cCCceeecCCCC-ccccccccccCccccccCCCCCcCCCCCc
Q 002926 160 RARRMLSCKSCG-KKYHRNCLKNWAQNRDLFHWSSWKCPSCR 200 (864)
Q Consensus 160 ~~eeLL~Cd~C~-raYH~~CL~p~~~~~~~v~~~~W~CpeCk 200 (864)
..-+||.|..|+ ..-|..|...... ...|.|..|.
T Consensus 42 ~~W~L~lC~~Cgs~gtH~~Cs~l~~~------~~~weC~~C~ 77 (85)
T 1weq_A 42 GRWRLILCATCGSHGTHRDCSSLRPN------SKKWECNECL 77 (85)
T ss_dssp STTBCEECSSSCCCEECSGGGTCCTT------CSCCCCTTTS
T ss_pred CCEEEEeCcccCCchhHHHHhCCcCC------CCCEECCcCc
Confidence 345799999999 6999999986322 4679999883
No 205
>3dlm_A Histone-lysine N-methyltransferase setdb1; setdb1_human, structural genomics, structural genomics consortium, SGC, alternative splicing; 1.77A {Homo sapiens}
Probab=49.06 E-value=24 Score=36.47 Aligned_cols=46 Identities=17% Similarity=0.357 Sum_probs=35.5
Q ss_pred ccccccceEEEEecCCCceeeeeeEEeec--CeeEEEEEecCCccccee
Q 002926 800 GKDAIGKRVEVHQQSDNSWHKGVVTDTVE--GTSTLSITLDDSRVKTLE 846 (864)
Q Consensus 800 g~da~~krvev~~~sd~~w~~g~v~~~~~--~~~~~~v~~d~~~~~~~~ 846 (864)
|+=.+|-||=.-+ .+++|++|+|++|.. .--+.-|.|||+..+.|-
T Consensus 7 ~~l~Vg~~vlg~k-~~~~W~rg~v~~I~~~~~g~~YkVkF~~~g~~ivs 54 (213)
T 3dlm_A 7 GDLIVSMRILGKK-RTKTWHKGTLIAIQTVGPGKKYKVKFDNKGKSLLS 54 (213)
T ss_dssp TTEETTCEEEEEC-TTSBEEEEEEEEEEEETTEEEEEEEESSSCEEEEC
T ss_pred CcEEEccEEEEEe-cCCcEEEEEEEEEEECCCCeEEEEEEcCCCCEEee
Confidence 4447899999988 559999999999865 335699999977655443
No 206
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=48.76 E-value=5.7 Score=44.02 Aligned_cols=40 Identities=28% Similarity=0.728 Sum_probs=28.4
Q ss_pred ccccccccccccccCcccCCceeecC--CCCccccccccccCcc
Q 002926 143 TNVMCRLCFVGENEGCERARRMLSCK--SCGKKYHRNCLKNWAQ 184 (864)
Q Consensus 143 ~dd~C~vC~~gG~~gs~~~eeLL~Cd--~C~raYH~~CL~p~~~ 184 (864)
....|.||...-.. ...-.-..|. .|+..||..||..|..
T Consensus 307 ~~~ECaICys~~l~--~g~lPdk~C~n~~C~h~FH~~CL~kWLr 348 (381)
T 3k1l_B 307 EELRCNICFAYRLD--GGEVPLVSCDNAKCVLKCHAVCLEEWFK 348 (381)
T ss_dssp SCCSCSSSCCSSCT--TCCCCCBCCSCTTCCCCBCSGGGHHHHH
T ss_pred CCccCcccceeecC--CCCCccccccCCccCCccchHHHHHHHH
Confidence 34579999974311 0112446787 8999999999998865
No 207
>4hcz_A PHD finger protein 1; protein-peptide complex, tudor, histone binding, H3K36ME3, N nucleus, transcription; HET: M3L; 1.85A {Homo sapiens}
Probab=48.61 E-value=31 Score=28.93 Aligned_cols=42 Identities=12% Similarity=0.109 Sum_probs=34.1
Q ss_pred ccceEEEEecCCCceeeeeeEEeecCeeEEEEEecCCccccee
Q 002926 804 IGKRVEVHQQSDNSWHKGVVTDTVEGTSTLSITLDDSRVKTLE 846 (864)
Q Consensus 804 ~~krvev~~~sd~~w~~g~v~~~~~~~~~~~v~~d~~~~~~~~ 846 (864)
.|.-|-++| +|+..+-|+|..|-...-+.-|.|+|+..--++
T Consensus 6 ~GedVLarw-sDG~fYlGtI~~V~~~~~~clV~F~D~s~~W~~ 47 (58)
T 4hcz_A 6 EGQDVLARW-TDGLLYLGTIKKVDSAREVCLVQFEDDSQFLVL 47 (58)
T ss_dssp TTCEEEEEC-TTSCEEEEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred cCCEEEEEe-cCCCEEeEEEEEEecCCCEEEEEEcCCCeEEEE
Confidence 467788999 999999999999966654588999999864443
No 208
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=48.47 E-value=5.6 Score=34.76 Aligned_cols=35 Identities=20% Similarity=0.537 Sum_probs=24.8
Q ss_pred ccccccccccccccCcccCCceeecCCCCccccccccccCcc
Q 002926 143 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQ 184 (864)
Q Consensus 143 ~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~ 184 (864)
....|.+|...-. +-+....|+..||..|+..+..
T Consensus 21 ~~~~C~IC~~~~~-------~p~~~~~CgH~fC~~Ci~~~~~ 55 (99)
T 2y43_A 21 DLLRCGICFEYFN-------IAMIIPQCSHNYCSLCIRKFLS 55 (99)
T ss_dssp HHTBCTTTCSBCS-------SEEECTTTCCEEEHHHHHHHHT
T ss_pred CCCCcccCChhhC-------CcCEECCCCCHhhHHHHHHHHH
Confidence 3458999986431 2333357999999999987654
No 209
>2qqr_A JMJC domain-containing histone demethylation protein 3A; histone lysine demethylase, tandem hybrid tudor domains, metal binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 b.34.9.1 PDB: 2qqs_A* 2gfa_A* 2gf7_A*
Probab=48.18 E-value=25 Score=33.18 Aligned_cols=54 Identities=15% Similarity=0.228 Sum_probs=37.4
Q ss_pred hhhhHHHHHHhccccccceEEEEecCCCceeeeeeEEeecCeeEEEEEecCCccccee
Q 002926 789 IMDANWILKKLGKDAIGKRVEVHQQSDNSWHKGVVTDTVEGTSTLSITLDDSRVKTLE 846 (864)
Q Consensus 789 ~~d~~~il~~lg~da~~krvev~~~sd~~w~~g~v~~~~~~~~~~~v~~d~~~~~~~~ 846 (864)
|..-+| .+||.-+.|-+|+|.| -|+.=+.++...- .-...+.|.|+||++-+++
T Consensus 53 Ivs~dc--~~~GpP~~G~~V~V~W-~DG~~y~a~f~g~-~~~~~Y~V~feDgs~~~~k 106 (118)
T 2qqr_A 53 IVSQDC--LQFGPPAEGEVVQVRW-TDGQVYGAKFVAS-HPIQMYQVEFEDGSQLVVK 106 (118)
T ss_dssp BCSSCH--HHHCCCCTTCEEEEEC-TTSCEEEEEEEEE-EEEEEEEEEETTSCEEEEC
T ss_pred cccccc--cccCCCCCCCEEEEEc-CCCCEeeeEEece-eEEEEEEEEECCCCEEEEc
Confidence 444455 5779999999999998 5555555554432 1123588999999986664
No 210
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=47.27 E-value=7.7 Score=34.30 Aligned_cols=45 Identities=29% Similarity=0.718 Sum_probs=31.7
Q ss_pred ccccccccccCCCCCCceeccCCCCccccccCCCChHHHhhhccCCCCceeCCCCCCCC
Q 002926 284 YCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGEC 342 (864)
Q Consensus 284 yCpVC~K~Y~D~dg~~MVqCD~C~~WfH~eCd~l~dE~y~~~gid~~~~Y~CptCr~~~ 342 (864)
.|+||...+.+ .+.|..|.+.||..|+. . +.... .+.||.|+...
T Consensus 24 ~C~IC~~~~~~-----p~~~~~CgH~FC~~Ci~---~-~~~~~-----~~~CP~Cr~~~ 68 (100)
T 3lrq_A 24 RCFICMEKLRD-----ARLCPHCSKLCCFSCIR---R-WLTEQ-----RAQCPHCRAPL 68 (100)
T ss_dssp BCTTTCSBCSS-----EEECTTTCCEEEHHHHH---H-HHHHT-----CSBCTTTCCBC
T ss_pred CCccCCccccC-----ccccCCCCChhhHHHHH---H-HHHHC-----cCCCCCCCCcC
Confidence 58889877643 46678999999999954 2 22211 27999999753
No 211
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=46.69 E-value=6.7 Score=34.90 Aligned_cols=35 Identities=17% Similarity=0.402 Sum_probs=25.3
Q ss_pred ccccccccccccccCcccCCceeecCCCCccccccccccCcc
Q 002926 143 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQ 184 (864)
Q Consensus 143 ~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~ 184 (864)
.+..|.+|...- .+-+....|+..||..|+..+..
T Consensus 14 ~~~~C~IC~~~~-------~~p~~~~~CgH~fC~~Ci~~~~~ 48 (108)
T 2ckl_A 14 PHLMCVLCGGYF-------IDATTIIECLHSFCKTCIVRYLE 48 (108)
T ss_dssp GGTBCTTTSSBC-------SSEEEETTTCCEEEHHHHHHHHT
T ss_pred CcCCCccCChHH-------hCcCEeCCCCChhhHHHHHHHHH
Confidence 345899998643 13444568999999999987653
No 212
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=46.21 E-value=3 Score=36.34 Aligned_cols=43 Identities=19% Similarity=0.259 Sum_probs=24.9
Q ss_pred cccccccCCCCCceeecCCCCCcccccccCCCCcCCCCCCccccCCC
Q 002926 201 ICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHT 247 (864)
Q Consensus 201 ~C~VCgk~gd~~~LL~Cd~C~raYH~~CL~Ppl~svP~g~W~CP~C~ 247 (864)
.|.+|...-.....+..-.|+..||..|+..-+. ....||.|.
T Consensus 42 ~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl~----~~~~CP~Cr 84 (91)
T 2l0b_A 42 CCPICCSEYVKGDVATELPCHHYFHKPCVSIWLQ----KSGTCPVCR 84 (91)
T ss_dssp EETTTTEECCTTCEEEEETTTEEEEHHHHHHHHT----TTCBCTTTC
T ss_pred CCcccChhhcCCCcEEecCCCChHHHHHHHHHHH----cCCcCcCcC
Confidence 4556654333323333345999999999985332 123677765
No 213
>2co8_A NEDD9 interacting protein with calponin homology and LIM domains; zinc finger protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=45.93 E-value=18 Score=30.81 Aligned_cols=9 Identities=22% Similarity=0.479 Sum_probs=4.6
Q ss_pred CCccccccc
Q 002926 221 DAAYHCYCQ 229 (864)
Q Consensus 221 ~raYH~~CL 229 (864)
++.||..|.
T Consensus 35 ~~~wH~~CF 43 (82)
T 2co8_A 35 GHFFHRSCF 43 (82)
T ss_dssp TBCCBTTTC
T ss_pred CCeeCCCcC
Confidence 455665443
No 214
>2xqn_T Testin, TESS; metal-binding protein, cytoskeleton, focal adhesion, acrosom; 2.62A {Homo sapiens}
Probab=45.81 E-value=13 Score=33.87 Aligned_cols=43 Identities=19% Similarity=0.381 Sum_probs=20.8
Q ss_pred ccCCCCCCCCCCCccccccCccccCCCccccccccccccccccccC
Q 002926 249 CHSCGSNVPGNGLSVRWFLGYTCCDACGRLFVKGNYCPVCLKVYRD 294 (864)
Q Consensus 249 C~~CG~~~pgk~ls~rW~~~~~lC~~C~elf~KgnyCpVC~K~Y~D 294 (864)
|..|+....+. ..-...+.++|..|.... .+..|..|.+...+
T Consensus 33 C~~C~~~L~~~--~f~~~~g~~yC~~cy~~~-~~~~C~~C~~~I~~ 75 (126)
T 2xqn_T 33 CFDCDSILAGE--IYVMVNDKPVCKPCYVKN-HAVVCQGCHNAIDP 75 (126)
T ss_dssp CTTTCCBCTTS--EEEEETTEEEEHHHHHHH-SCCBCTTTCSBCCT
T ss_pred cCCCCCCCCcC--EEEeECCEEechHHhCcC-cCccCcccCCcCCc
Confidence 66666544321 111233556676665321 12357777766543
No 215
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=45.19 E-value=6.9 Score=40.59 Aligned_cols=43 Identities=23% Similarity=0.471 Sum_probs=28.6
Q ss_pred cccccccCCCCCceeecCCCCCcccccccCCCCcCCCCCCccccCCC
Q 002926 201 ICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHT 247 (864)
Q Consensus 201 ~C~VCgk~gd~~~LL~Cd~C~raYH~~CL~Ppl~svP~g~W~CP~C~ 247 (864)
.|.+|..--- .-..|..|+..||..|+...... ...-.||.|.
T Consensus 182 ~C~iC~~iv~--~g~~C~~C~~~~H~~C~~~~~~~--~~~~~CP~C~ 224 (238)
T 3nw0_A 182 ICNICHSLLI--QGQSCETCGIRMHLPCVAKYFQS--NAEPRCPHCN 224 (238)
T ss_dssp BCTTTCSBCS--SCEECSSSCCEECHHHHHHHTTT--CSSCBCTTTC
T ss_pred cCcchhhHHh--CCcccCccChHHHHHHHHHHHHh--CCCCCCCCCC
Confidence 5667775443 23789999999999999854322 2344677653
No 216
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=45.16 E-value=19 Score=29.79 Aligned_cols=47 Identities=23% Similarity=0.494 Sum_probs=30.0
Q ss_pred cccccccccccCCCCCCceeccCCCCccccccCCCChHHHhhhccCCCCceeCCCCCCCC
Q 002926 283 NYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGEC 342 (864)
Q Consensus 283 nyCpVC~K~Y~D~dg~~MVqCD~C~~WfH~eCd~l~dE~y~~~gid~~~~Y~CptCr~~~ 342 (864)
..|+||...+.+ .+.-..|.+.||..|+. ..+.. ...+.||.|+...
T Consensus 16 ~~C~IC~~~~~~-----p~~~~~CgH~fC~~Ci~---~~~~~-----~~~~~CP~Cr~~~ 62 (74)
T 2yur_A 16 LLCLICKDIMTD-----AVVIPCCGNSYCDECIR---TALLE-----SDEHTCPTCHQND 62 (74)
T ss_dssp GSCSSSCCCCTT-----CEECSSSCCEECTTHHH---HHHHH-----SSSSCCSSSCCSS
T ss_pred CCCcCCChHHhC-----CeEcCCCCCHHHHHHHH---HHHHh-----cCCCcCCCCCCcC
Confidence 358888776643 13333499999999954 22211 1257899999753
No 217
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=44.19 E-value=5.9 Score=36.99 Aligned_cols=32 Identities=16% Similarity=0.589 Sum_probs=22.1
Q ss_pred ccccccccccccCcccCCceeecCCCCccccccccccCcc
Q 002926 145 VMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQ 184 (864)
Q Consensus 145 d~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~ 184 (864)
..|.||...-. +-+. -.|+..||..|+..|..
T Consensus 54 ~~C~iC~~~~~-------~~~~-~~CgH~fc~~Ci~~~~~ 85 (138)
T 4ayc_A 54 LQCIICSEYFI-------EAVT-LNCAHSFCSYCINEWMK 85 (138)
T ss_dssp SBCTTTCSBCS-------SEEE-ETTSCEEEHHHHHHHTT
T ss_pred CCCcccCcccC-------CceE-CCCCCCccHHHHHHHHH
Confidence 47999986431 2222 26999999999987653
No 218
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=43.79 E-value=5.1 Score=31.66 Aligned_cols=48 Identities=27% Similarity=0.656 Sum_probs=31.4
Q ss_pred ccccccccccCC-CCCCceeccCCCCccccccCCCChHHHhhhccCCCCceeCCCCCCC
Q 002926 284 YCPVCLKVYRDS-ESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGE 341 (864)
Q Consensus 284 yCpVC~K~Y~D~-dg~~MVqCD~C~~WfH~eCd~l~dE~y~~~gid~~~~Y~CptCr~~ 341 (864)
.|++|...+.+. .....+....|.+.||..|+.. +... ...||.|+..
T Consensus 5 ~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~----~~~~------~~~CP~Cr~~ 53 (64)
T 2xeu_A 5 SCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRD----SLKN------ANTCPTCRKK 53 (64)
T ss_dssp BCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHH----HHHH------CSBCTTTCCB
T ss_pred CCCccChhhhCccccCCCEEeCCCCCchhHHHHHH----HHHc------CCCCCCCCcc
Confidence 588898877542 1223445567999999999542 2211 3589999965
No 219
>4b9w_A TDRD1, tudor domain-containing protein 1; replication; HET: 2MR; 2.10A {Mus musculus}
Probab=43.60 E-value=34 Score=33.87 Aligned_cols=53 Identities=13% Similarity=0.343 Sum_probs=39.2
Q ss_pred cccceEEEEecCCCceeeeeeEEeecCeeEEEEEe-cCCcccceecCceeeEeeecc
Q 002926 803 AIGKRVEVHQQSDNSWHKGVVTDTVEGTSTLSITL-DDSRVKTLELGKQGVRFVPQK 858 (864)
Q Consensus 803 a~~krvev~~~sd~~w~~g~v~~~~~~~~~~~v~~-d~~~~~~~~~gk~~vr~~~~~ 858 (864)
.+|.-+-+..+.||.||.|.|.++.... ++.|.| |=|..+++.+ ..+|.||..
T Consensus 67 ~~G~~c~a~~~~d~~wyRa~V~~~~~~~-~~~V~~vDyG~~~~v~~--~~l~~l~~~ 120 (201)
T 4b9w_A 67 EIGRPCCAFFSGDGNWYRALVKEILPSG-NVKVHFVDYGNVEEVTT--DQLQAILPQ 120 (201)
T ss_dssp CTTCEEEEEETTTTEEEEEEEEEECTTS-CEEEEETTTCCEEEECG--GGEEECCGG
T ss_pred CCCCEEEEEECCCCeEEEEEEEEECCCC-eEEEEEEccCCEEEEEH--HHhccChHh
Confidence 4688888888889999999999997553 255554 6688887765 357777643
No 220
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=43.57 E-value=4.8 Score=32.80 Aligned_cols=33 Identities=18% Similarity=0.721 Sum_probs=23.7
Q ss_pred ccccccccccccccCcccCCceeecCCCCccccccccccCcc
Q 002926 143 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQ 184 (864)
Q Consensus 143 ~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~ 184 (864)
....|.||...-. + .-..|+..||..|+..+..
T Consensus 14 ~~~~C~IC~~~~~-------~--~~~~CgH~fc~~Ci~~~~~ 46 (70)
T 2ecn_A 14 DEEECCICMDGRA-------D--LILPCAHSFCQKCIDKWSD 46 (70)
T ss_dssp CCCCCSSSCCSCC-------S--EEETTTEEECHHHHHHSSC
T ss_pred CCCCCeeCCcCcc-------C--cccCCCCcccHHHHHHHHH
Confidence 4568999987431 2 2236999999999987654
No 221
>2e5p_A Protein PHF1, PHD finger protein 1; tudor domain, PHF1 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=43.36 E-value=33 Score=29.56 Aligned_cols=40 Identities=13% Similarity=0.103 Sum_probs=33.4
Q ss_pred cccceEEEEecCCCceeeeeeEEeecCeeEEEEEecCCccc
Q 002926 803 AIGKRVEVHQQSDNSWHKGVVTDTVEGTSTLSITLDDSRVK 843 (864)
Q Consensus 803 a~~krvev~~~sd~~w~~g~v~~~~~~~~~~~v~~d~~~~~ 843 (864)
-+|.-|-.+| +|+-.+-|+|..|-.-+-.--|+|.|+...
T Consensus 11 ~eGqdVLarW-sDGlfYlGtV~kV~~~~~~ClV~FeD~s~~ 50 (68)
T 2e5p_A 11 WEGQDVLARW-TDGLLYLGTIKKVDSAREVCLVQFEDDSQF 50 (68)
T ss_dssp CTTCEEEEEC-TTSSEEEEEEEEEETTTTEEEEEETTTEEE
T ss_pred ccCCEEEEEe-cCCcEEEeEEEEEecCCcEEEEEEccCCee
Confidence 4678888899 999999999999987555577999988754
No 222
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=42.57 E-value=9.8 Score=31.56 Aligned_cols=49 Identities=22% Similarity=0.561 Sum_probs=30.7
Q ss_pred cccccccccccCCCCCCceeccCCCCccccccCCCChHHHhhhccCCCCceeCCCCCCC
Q 002926 283 NYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGE 341 (864)
Q Consensus 283 nyCpVC~K~Y~D~dg~~MVqCD~C~~WfH~eCd~l~dE~y~~~gid~~~~Y~CptCr~~ 341 (864)
..|+||...|.+. +. -.|.+.||..|+.. +............||.|+..
T Consensus 20 ~~C~IC~~~~~~p-----~~-~~CgH~fC~~Ci~~----~~~~~~~~~~~~~CP~Cr~~ 68 (85)
T 2ecw_A 20 VTCPICLELLKEP-----VS-ADCNHSFCRACITL----NYESNRNTDGKGNCPVCRVP 68 (85)
T ss_dssp TSCTTTCSCCSSC-----EE-CTTSCCBCHHHHHH----HHHHSBCTTSCBCCTTTCCC
T ss_pred CCCcCCChhhCcc-----ee-CCCCCHHHHHHHHH----HHHhccCCCCCCCCCCCCCc
Confidence 4688888776442 22 24899999999542 22211122347899999975
No 223
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=42.32 E-value=13 Score=30.55 Aligned_cols=45 Identities=20% Similarity=0.422 Sum_probs=29.9
Q ss_pred cccccccccccCCCCCCceeccCCCCccccccCCCChHHHhhhccCCCCceeCCCCCCCC
Q 002926 283 NYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGEC 342 (864)
Q Consensus 283 nyCpVC~K~Y~D~dg~~MVqCD~C~~WfH~eCd~l~dE~y~~~gid~~~~Y~CptCr~~~ 342 (864)
..|+||...+.+ .+.-..|.+.||..|+. . +... ...||.|+...
T Consensus 16 ~~C~IC~~~~~~-----p~~~~~CgH~fC~~Ci~---~-~~~~------~~~CP~Cr~~~ 60 (72)
T 2djb_A 16 ILCSICKGYLID-----ATTITECLHTFCKSCIV---R-HFYY------SNRCPKCNIVV 60 (72)
T ss_dssp GSCTTTSSCCSS-----CEECSSSCCEECHHHHH---H-HHHH------CSSCTTTCCCC
T ss_pred CCCCCCChHHHC-----cCEECCCCCHHHHHHHH---H-HHHc------CCcCCCcCccc
Confidence 458888876654 23445799999999954 1 2111 46899999753
No 224
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=40.82 E-value=7.4 Score=33.52 Aligned_cols=49 Identities=20% Similarity=0.459 Sum_probs=30.7
Q ss_pred cccccccccccCCCCCCceeccCCCCccccccCCCChHHHhhhccCCCCceeCCCCCCCC
Q 002926 283 NYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGEC 342 (864)
Q Consensus 283 nyCpVC~K~Y~D~dg~~MVqCD~C~~WfH~eCd~l~dE~y~~~gid~~~~Y~CptCr~~~ 342 (864)
..|+||...+...+ ...+.| .|.+.|+..|+.. +. ....+.||.||...
T Consensus 12 ~~CpICle~~~~~d-~~~~p~-~CGH~fC~~Cl~~----~~-----~~~~~~CP~CR~~~ 60 (78)
T 1e4u_A 12 VECPLCMEPLEIDD-INFFPC-TCGYQICRFCWHR----IR-----TDENGLCPACRKPY 60 (78)
T ss_dssp CBCTTTCCBCCTTT-TTCCSS-TTSCCCCHHHHHH----HT-----TSSCSBCTTTCCBC
T ss_pred CcCCccCccCcccc-cccccc-CCCCCcCHHHHHH----HH-----hcCCCCCCCCCCcc
Confidence 46899988663222 223334 6888899988541 10 12468999999753
No 225
>2diq_A Tudor and KH domain-containing protein; tudor domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=40.50 E-value=22 Score=32.15 Aligned_cols=51 Identities=24% Similarity=0.378 Sum_probs=39.8
Q ss_pred cccceEEEEecCCCceeeeeeEEeec-CeeEEEEEe-cCCcccceecCceeeEeeec
Q 002926 803 AIGKRVEVHQQSDNSWHKGVVTDTVE-GTSTLSITL-DDSRVKTLELGKQGVRFVPQ 857 (864)
Q Consensus 803 a~~krvev~~~sd~~w~~g~v~~~~~-~~~~~~v~~-d~~~~~~~~~gk~~vr~~~~ 857 (864)
.+|.-+-+..+-|+.|+.++|..|.+ ++ +.|.| |=|..+++.+ ..+|.|+.
T Consensus 34 ~~G~~c~a~~~~d~~wyRA~V~~~~~~~~--~~V~fvDyGn~e~v~~--~~Lr~l~~ 86 (110)
T 2diq_A 34 HVGDIVAAPLPTNGSWYRARVLGTLENGN--LDLYFVDFGDNGDCPL--KDLRALRS 86 (110)
T ss_dssp CTTCEEEECCTTTCSCEEEEECCCCSSSC--EEEEETTTCCEEEECG--GGCEECCH
T ss_pred CCCCEEEEEECCCCeEEEEEEEEECCCCe--EEEEEEeCCCeEEEeh--HHhhcCcH
Confidence 57888888887799999999999986 44 66766 5588888875 45777764
No 226
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=40.02 E-value=16 Score=32.24 Aligned_cols=45 Identities=22% Similarity=0.623 Sum_probs=29.2
Q ss_pred ccccccccccCCCCCCceeccCCCCccccccCCCChHHHhhhccCCCCceeCCCCCCC
Q 002926 284 YCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGE 341 (864)
Q Consensus 284 yCpVC~K~Y~D~dg~~MVqCD~C~~WfH~eCd~l~dE~y~~~gid~~~~Y~CptCr~~ 341 (864)
.|+||...+.+. .+ -.|.+.||..|+.. +.. .....+.||.|+..
T Consensus 23 ~C~IC~~~~~~p----~~--~~CgH~fC~~Ci~~----~~~---~~~~~~~CP~Cr~~ 67 (112)
T 1jm7_A 23 ECPICLELIKEP----VS--TKCDHIFCKFCMLK----LLN---QKKGPSQCPLCKND 67 (112)
T ss_dssp SCSSSCCCCSSC----CB--CTTSCCCCSHHHHH----HHH---SSSSSCCCTTTSCC
T ss_pred CCcccChhhcCe----EE--CCCCCHHHHHHHHH----HHH---hCCCCCCCcCCCCc
Confidence 588998776442 12 26899999999541 221 11235799999975
No 227
>1y96_A Gemin6, SIP2, GEM-associated protein 6; SM fold, protein complex, RNA binding protein; 2.00A {Homo sapiens}
Probab=40.01 E-value=48 Score=29.75 Aligned_cols=34 Identities=29% Similarity=0.242 Sum_probs=26.4
Q ss_pred ccccceEEEEecCCCceeeeeeEEee-cCeeEEEEE
Q 002926 802 DAIGKRVEVHQQSDNSWHKGVVTDTV-EGTSTLSIT 836 (864)
Q Consensus 802 da~~krvev~~~sd~~w~~g~v~~~~-~~~~~~~v~ 836 (864)
.-|||.|.|-. +||+=|+|+|..|- ..-|-+-++
T Consensus 14 ~li~KeV~V~l-~dg~~y~G~l~tvDp~s~sIvL~n 48 (86)
T 1y96_A 14 DYIYKEVRVTA-SEKNEYKGWVLTTDPVSANIVLVN 48 (86)
T ss_dssp HTTTCEEEEEE-TTTEEEEEEEEEECTTTCCEEEEE
T ss_pred hhcCCEEEEEE-cCCCEEEEEEEEECCCceEEEEee
Confidence 46999999998 99999999999985 333333334
No 228
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=39.74 E-value=14 Score=32.83 Aligned_cols=36 Identities=28% Similarity=0.804 Sum_probs=25.5
Q ss_pred CCCCcCCCCCccccccccCCCCCceeecCC--CCCcccccccC
Q 002926 190 HWSSWKCPSCRICEICRRTGDPNKFMFCRR--CDAAYHCYCQH 230 (864)
Q Consensus 190 ~~~~W~CpeCk~C~VCgk~gd~~~LL~Cd~--C~raYH~~CL~ 230 (864)
+..+|. ..|.+|+..+ ..-.+.|.. |..+||..|..
T Consensus 12 p~~R~~----l~C~iC~~~~-~GAciqC~~~~C~~~fHv~CA~ 49 (87)
T 2lq6_A 12 PPARWK----LTCYLCKQKG-VGASIQCHKANCYTAFHVTCAQ 49 (87)
T ss_dssp CCCCCC----CCBTTTTBCC-SSCEEECSCTTTCCEEEHHHHH
T ss_pred ChHHhc----CCCcCCCCCC-CcEeEecCCCCCCCcCcHHHHH
Confidence 356674 3677887531 116799985 99999999976
No 229
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=39.31 E-value=8.1 Score=35.22 Aligned_cols=42 Identities=21% Similarity=0.539 Sum_probs=27.5
Q ss_pred cccccccccccccCcccCCceeecCCCCccccccccccCccccccCCCCCcCCCCC
Q 002926 144 NVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSC 199 (864)
Q Consensus 144 dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~~~~~v~~~~W~CpeC 199 (864)
...|.||...-. ...+. .|+..||..|+..+.. .....||.|
T Consensus 52 ~~~C~IC~~~~~------~p~~~--~CgH~fC~~Ci~~~~~------~~~~~CP~C 93 (124)
T 3fl2_A 52 TFQCICCQELVF------RPITT--VCQHNVCKDCLDRSFR------AQVFSCPAC 93 (124)
T ss_dssp HTBCTTTSSBCS------SEEEC--TTSCEEEHHHHHHHHH------TTCCBCTTT
T ss_pred CCCCCcCChHHc------CcEEe--eCCCcccHHHHHHHHh------HCcCCCCCC
Confidence 457999986431 12222 8999999999987654 133456665
No 230
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=39.08 E-value=12 Score=31.96 Aligned_cols=45 Identities=20% Similarity=0.608 Sum_probs=28.5
Q ss_pred ccccccccccccccCcccCCceeecCCCCccccccccccCccccccCCCCCcCCCCC
Q 002926 143 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSC 199 (864)
Q Consensus 143 ~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~~~~~v~~~~W~CpeC 199 (864)
.+..|.+|...-. +-+.-..|+..|+..|+..+... .+...||.|
T Consensus 12 ~~~~C~IC~~~~~-------~p~~~~~CgH~fC~~Ci~~~~~~-----~~~~~CP~C 56 (92)
T 3ztg_A 12 DELLCLICKDIMT-------DAVVIPCCGNSYCDECIRTALLE-----SDEHTCPTC 56 (92)
T ss_dssp TTTEETTTTEECS-------SCEECTTTCCEECHHHHHHHHHH-----CTTCCCTTT
T ss_pred cCCCCCCCChhhc-------CceECCCCCCHHHHHHHHHHHHh-----cCCCcCcCC
Confidence 4568999986431 22222349999999999876532 123566665
No 231
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=38.75 E-value=8.2 Score=34.07 Aligned_cols=44 Identities=16% Similarity=0.513 Sum_probs=28.1
Q ss_pred cccccccccccccCcccCCceeecCCCCccccccccccCccccccCCCCCcCCCCC
Q 002926 144 NVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSC 199 (864)
Q Consensus 144 dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~~~~~v~~~~W~CpeC 199 (864)
...|.+|...-. . ..+ ..|+..||..|+..+.... .+...||.|
T Consensus 21 ~~~C~IC~~~~~----~--p~~--~~CgH~fC~~Ci~~~~~~~----~~~~~CP~C 64 (112)
T 1jm7_A 21 ILECPICLELIK----E--PVS--TKCDHIFCKFCMLKLLNQK----KGPSQCPLC 64 (112)
T ss_dssp HTSCSSSCCCCS----S--CCB--CTTSCCCCSHHHHHHHHSS----SSSCCCTTT
T ss_pred CCCCcccChhhc----C--eEE--CCCCCHHHHHHHHHHHHhC----CCCCCCcCC
Confidence 347999986421 1 222 3799999999998765421 234567665
No 232
>4b9x_A TDRD1, tudor domain-containing protein 1; replication; 2.80A {Mus musculus}
Probab=36.11 E-value=44 Score=33.70 Aligned_cols=52 Identities=13% Similarity=0.335 Sum_probs=38.7
Q ss_pred cccceEEEEecCCCceeeeeeEEeecCeeEEEEEe-cCCcccceecCceeeEeeec
Q 002926 803 AIGKRVEVHQQSDNSWHKGVVTDTVEGTSTLSITL-DDSRVKTLELGKQGVRFVPQ 857 (864)
Q Consensus 803 a~~krvev~~~sd~~w~~g~v~~~~~~~~~~~v~~-d~~~~~~~~~gk~~vr~~~~ 857 (864)
.+|.-+-+..+.||.||.|.|..+.+.. ++.|.| |=|..+++.+. .+|.||.
T Consensus 67 ~~G~~c~a~~~~d~~WyRa~V~~~~~~~-~~~V~~vDyGn~~~v~~~--~l~~l~~ 119 (226)
T 4b9x_A 67 EIGRPCCAFFSGDGNWYRALVKEILPSG-NVKVHFVDYGNVEEVTTD--QLQAILP 119 (226)
T ss_dssp CTTCEEEEEETTTTEEEEEEEEEECSSS-EEEEECTTTCCEEEEEGG--GEECCCG
T ss_pred CCCCEEEEEECCCCeEEEEEEEEECCCC-eEEEEEEecCCEEEEEHH--HhccChH
Confidence 4688888888889999999999997553 266654 66888877653 4776664
No 233
>3ntk_A Maternal protein tudor; tudor domain, OB-fold, GERM cell formation, transcription; 1.80A {Drosophila melanogaster} PDB: 3nth_A* 3nti_A*
Probab=35.93 E-value=42 Score=32.44 Aligned_cols=52 Identities=12% Similarity=0.158 Sum_probs=39.9
Q ss_pred cccccceEEEEecCCCceeeeeeEEeecCeeEEEEEe-cCCcccceecCceeeEeeec
Q 002926 801 KDAIGKRVEVHQQSDNSWHKGVVTDTVEGTSTLSITL-DDSRVKTLELGKQGVRFVPQ 857 (864)
Q Consensus 801 ~da~~krvev~~~sd~~w~~g~v~~~~~~~~~~~v~~-d~~~~~~~~~gk~~vr~~~~ 857 (864)
.=.+|.-+-+..+.||.|+.++|..+..+. ++.|.| |=|..+++ ..+|.+|.
T Consensus 47 ~~~~G~~c~A~~~~d~~wyRa~I~~~~~~~-~~~V~fvDyGn~~~v----~~lr~l~~ 99 (169)
T 3ntk_A 47 DLKEGALCVAQFPEDEVFYRAQIRKVLDDG-KCEVHFIDFGNNAVT----QQFRQLPE 99 (169)
T ss_dssp CCCTTCEEEEEETTTTEEEEEEEEEECSTT-CEEEEETTTTEEEEE----SCEECCCH
T ss_pred CCCCCCEEEEEECCCCcEEEEEEEEECCCC-EEEEEEEecCCeEEh----hhhhccCH
Confidence 345888888888889999999999998754 577777 44777763 57777764
No 234
>2eqj_A Metal-response element-binding transcription factor 2; structure genomics,tudor domain, zinc-regulated factor 1, ZIRF1; NMR {Mus musculus}
Probab=35.57 E-value=52 Score=28.31 Aligned_cols=40 Identities=20% Similarity=0.163 Sum_probs=32.9
Q ss_pred cccceEEEEecCCCceeeeeeEEeecCeeEEEEEecCCccc
Q 002926 803 AIGKRVEVHQQSDNSWHKGVVTDTVEGTSTLSITLDDSRVK 843 (864)
Q Consensus 803 a~~krvev~~~sd~~w~~g~v~~~~~~~~~~~v~~d~~~~~ 843 (864)
-+|--|-.+| +|+-.+-|+|+.|-.-+-+-.|+|.||...
T Consensus 15 ~vGddVLA~w-tDGl~Y~gtI~~V~~~~gtC~V~F~D~s~~ 54 (66)
T 2eqj_A 15 EEGQDVLARW-SDGLFYLGTIKKINILKQSCFIIFEDSSKS 54 (66)
T ss_dssp CTTCEEEEEC-TTSCEEEEEEEEEETTTTEEEEEETTTEEE
T ss_pred cCCCEEEEEE-ccCcEEEeEEEEEccCCcEEEEEEccCCEE
Confidence 3677788899 999999999999975333499999999764
No 235
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=35.13 E-value=11 Score=31.19 Aligned_cols=43 Identities=19% Similarity=0.485 Sum_probs=28.2
Q ss_pred ccccccccccccccCcccCCceeecCCCCccccccccccCccccccCCCCCcCCCCC
Q 002926 143 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSC 199 (864)
Q Consensus 143 ~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~~~~~v~~~~W~CpeC 199 (864)
.+..|.+|...-. +..+. .|+..|+..|+..+.. .+...||.|
T Consensus 7 ~~~~C~IC~~~~~------~Pv~~--~CgH~fc~~Ci~~~~~------~~~~~CP~C 49 (78)
T 1t1h_A 7 EYFRCPISLELMK------DPVIV--STGQTYERSSIQKWLD------AGHKTCPKS 49 (78)
T ss_dssp SSSSCTTTSCCCS------SEEEE--TTTEEEEHHHHHHHHT------TTCCBCTTT
T ss_pred ccCCCCCcccccc------CCEEc--CCCCeecHHHHHHHHH------HCcCCCCCC
Confidence 3558999986431 12332 7999999999987653 234556655
No 236
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=34.82 E-value=17 Score=31.68 Aligned_cols=45 Identities=20% Similarity=0.499 Sum_probs=30.0
Q ss_pred cccccccccccCCCCCCceeccCCCCccccccCCCChHHHhhhccCCCCceeCCCCCCCC
Q 002926 283 NYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGEC 342 (864)
Q Consensus 283 nyCpVC~K~Y~D~dg~~MVqCD~C~~WfH~eCd~l~dE~y~~~gid~~~~Y~CptCr~~~ 342 (864)
..|++|...|.+ .+....|.+.||..|+.. +.. ....||.|+...
T Consensus 23 ~~C~IC~~~~~~-----p~~~~~CgH~fC~~Ci~~----~~~------~~~~CP~Cr~~~ 67 (99)
T 2y43_A 23 LRCGICFEYFNI-----AMIIPQCSHNYCSLCIRK----FLS------YKTQCPTCCVTV 67 (99)
T ss_dssp TBCTTTCSBCSS-----EEECTTTCCEEEHHHHHH----HHT------TCCBCTTTCCBC
T ss_pred CCcccCChhhCC-----cCEECCCCCHhhHHHHHH----HHH------CCCCCCCCCCcC
Confidence 358899877654 233346999999999541 211 146999999753
No 237
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=33.99 E-value=29 Score=29.89 Aligned_cols=44 Identities=23% Similarity=0.565 Sum_probs=24.6
Q ss_pred CCCceeccCCCCccccccCCCChHHHhhhccCCCCceeCCCCCCCCcC
Q 002926 297 STPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGECYQ 344 (864)
Q Consensus 297 g~~MVqCD~C~~WfH~eCd~l~dE~y~~~gid~~~~Y~CptCr~~~~~ 344 (864)
+...+.|..|.+.|-..-. + ..-.+. -.....|.|+.|......
T Consensus 63 ~~~~~~C~~C~~~f~~~~~-l--~~H~~~-h~~~~~~~C~~C~~~f~~ 106 (124)
T 2dlq_A 63 SEQVFTCSVCQETFRRRME-L--RLHMVS-HTGEMPYKCSSCSQQFMQ 106 (124)
T ss_dssp CCCCEECSSSCCEESSHHH-H--HHHHHH-HSSSCSEECSSSCCEESS
T ss_pred CCCCeECCCCCCccCCHHH-H--HHHHHH-cCCCCCccCCCccchhCC
Confidence 3456789999988754210 0 000111 123457999999865443
No 238
>1ib8_A Conserved protein SP14.3; nucleic acid binding protein, ribosomal protein, essential gene, structural genomics; NMR {Streptococcus pneumoniae} SCOP: b.38.2.1 d.52.4.1
Probab=33.96 E-value=50 Score=32.31 Aligned_cols=36 Identities=25% Similarity=0.330 Sum_probs=28.7
Q ss_pred ccccceEEEEe--cCCC-ceeeeeeEEeecCeeEEEEEecC
Q 002926 802 DAIGKRVEVHQ--QSDN-SWHKGVVTDTVEGTSTLSITLDD 839 (864)
Q Consensus 802 da~~krvev~~--~sd~-~w~~g~v~~~~~~~~~~~v~~d~ 839 (864)
.++|+.|+|.. +.++ +..+|++..|-+++ +.|.+++
T Consensus 101 r~~G~~V~V~l~~~~~g~k~~~G~L~~~~~~~--v~l~~~~ 139 (164)
T 1ib8_A 101 GAVGKYIHVGLYQAIDKQKVFEGTLLAFEEDE--LTMEYMD 139 (164)
T ss_dssp HHCSEEEEEECSSCSSSCSEEEEEEEEEETTE--EEEEEEC
T ss_pred HhCCcEEEEEEecccCCceEEEEEEEEEeCCE--EEEEEec
Confidence 47999999987 3344 78899999999888 7777765
No 239
>2e5q_A PHD finger protein 19; tudor domain, isoform B, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.59 E-value=45 Score=28.40 Aligned_cols=40 Identities=15% Similarity=0.206 Sum_probs=32.9
Q ss_pred cccceEEEEecCCCceeeeeeEEeecCeeEEEEEecCCccc
Q 002926 803 AIGKRVEVHQQSDNSWHKGVVTDTVEGTSTLSITLDDSRVK 843 (864)
Q Consensus 803 a~~krvev~~~sd~~w~~g~v~~~~~~~~~~~v~~d~~~~~ 843 (864)
-+|.-|-.|| +|+-.+=|+|..|-..+-.--|+|.|+...
T Consensus 9 ~eGqdVLarW-sDGlfYlgtV~kV~~~~~~ClV~FeD~s~~ 48 (63)
T 2e5q_A 9 TEGQYVLCRW-TDGLYYLGKIKRVSSSKQSCLVTFEDNSKY 48 (63)
T ss_dssp CTTCEEEEEC-TTSCEEEEEECCCCSTTSEEEEEETTSCEE
T ss_pred ecCCEEEEEe-cCCCEEEEEEEEEecCCCEEEEEEccCcee
Confidence 3677888999 999999999999976655577888888753
No 240
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=33.58 E-value=20 Score=32.51 Aligned_cols=54 Identities=19% Similarity=0.450 Sum_probs=34.5
Q ss_pred CCcccccccccccccccCcccCCceeecCCCCccccccccccCccccccCCCCCcCCCCCc
Q 002926 140 QSNTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSCR 200 (864)
Q Consensus 140 ~s~~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~~~~~v~~~~W~CpeCk 200 (864)
...+..+|.||++.- +.....+.++.|..|.-..-..|+.+.. .++.-.|++|+
T Consensus 12 ~~~~~qiCqiCGD~V-G~~~~Ge~FVAC~eC~FPvCrpCyEYEr------keG~q~CpqCk 65 (93)
T 1weo_A 12 KNLDGQFCEICGDQI-GLTVEGDLFVACNECGFPACRPCYEYER------REGTQNCPQCK 65 (93)
T ss_dssp SCCSSCBCSSSCCBC-CBCSSSSBCCSCSSSCCCCCHHHHHHHH------HTSCSSCTTTC
T ss_pred cccCCCccccccCcc-ccCCCCCEEEeeeccCChhhHHHHHHHH------hccCccccccC
Confidence 334557999999741 1223445788888888777777777622 24566677763
No 241
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=33.54 E-value=20 Score=29.45 Aligned_cols=29 Identities=21% Similarity=0.406 Sum_probs=19.5
Q ss_pred CCCCcccccccCCCCcCC---CCCCccccCCC
Q 002926 219 RCDAAYHCYCQHPPHKNV---SSGPYLCPKHT 247 (864)
Q Consensus 219 ~C~raYH~~CL~Ppl~sv---P~g~W~CP~C~ 247 (864)
.|+..||..|+...+... ......||.|.
T Consensus 29 ~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr 60 (79)
T 2egp_A 29 DCGHSLCRACITVSNKEAVTSMGGKSSCPVCG 60 (79)
T ss_dssp SSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSC
T ss_pred CCCCHHHHHHHHHHHHhcccCCCCCCcCCCCC
Confidence 688899999998644331 12356777765
No 242
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.22 E-value=15 Score=28.42 Aligned_cols=27 Identities=15% Similarity=0.432 Sum_probs=17.8
Q ss_pred CCCCcccccccCCCCcCCCCCCccccCC
Q 002926 219 RCDAAYHCYCQHPPHKNVSSGPYLCPKH 246 (864)
Q Consensus 219 ~C~raYH~~CL~Ppl~svP~g~W~CP~C 246 (864)
.|+..||..|+...+... .....||.|
T Consensus 32 ~CgH~fC~~Ci~~~~~~~-~~~~~CP~C 58 (58)
T 2ecj_A 32 ECGHNFCKACITRWWEDL-ERDFPCPVC 58 (58)
T ss_dssp SSCCCCCHHHHHHHTTSS-CCSCCCSCC
T ss_pred CCCCccCHHHHHHHHHhc-CCCCCCCCC
Confidence 688899999998543321 235667765
No 243
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=32.08 E-value=19 Score=31.88 Aligned_cols=32 Identities=22% Similarity=0.633 Sum_probs=23.9
Q ss_pred cccccccccccccCcccCCceeecC--CCCcccccccccc
Q 002926 144 NVMCRLCFVGENEGCERARRMLSCK--SCGKKYHRNCLKN 181 (864)
Q Consensus 144 dd~C~vC~~gG~~gs~~~eeLL~Cd--~C~raYH~~CL~p 181 (864)
...|.+|...+. .-.|-|. .|.++||..|...
T Consensus 17 ~l~C~iC~~~~~------GAciqC~~~~C~~~fHv~CA~~ 50 (87)
T 2lq6_A 17 KLTCYLCKQKGV------GASIQCHKANCYTAFHVTCAQK 50 (87)
T ss_dssp CCCBTTTTBCCS------SCEEECSCTTTCCEEEHHHHHH
T ss_pred cCCCcCCCCCCC------cEeEecCCCCCCCcCcHHHHHH
Confidence 348999985310 1678887 6999999999754
No 244
>2dxu_A Biotin--[acetyl-COA-carboxylase] ligase; biotin biosynthesis, dimer, X-RAY diffraction, structural genomics, NPPSFA; HET: BT5; 1.28A {Pyrococcus horikoshii} PDB: 2dzc_A 2ejg_A* 2e3y_A* 2e41_A* 2e64_A 2ejf_A* 2zgw_A* 1wqw_A* 1wpy_A* 1wq7_A 1wnl_A* 1x01_A* 2dkg_A* 2dth_A* 2dti_A* 2dto_A* 2fyk_A* 2djz_A* 2hni_A 2e10_A ...
Probab=31.85 E-value=37 Score=34.79 Aligned_cols=45 Identities=33% Similarity=0.516 Sum_probs=34.8
Q ss_pred ccceEEEEecCCCceeeeeeEEe-ecCeeEEEEEecCCcccceecCceeeE
Q 002926 804 IGKRVEVHQQSDNSWHKGVVTDT-VEGTSTLSITLDDSRVKTLELGKQGVR 853 (864)
Q Consensus 804 ~~krvev~~~sd~~w~~g~v~~~-~~~~~~~~v~~d~~~~~~~~~gk~~vr 853 (864)
+|++|.|+.+. . ..|++..| -.|. |.|..+||..+++-.|-=.+|
T Consensus 188 ~g~~V~v~~~~--~-~~G~~~gId~~G~--L~v~~~~G~~~~~~~Gev~~~ 233 (235)
T 2dxu_A 188 LGVRVKILGDG--S-FEGIAEDIDDFGR--LIIRLDSGEVKKVIYGDVSLR 233 (235)
T ss_dssp CSSEEEC------C-CEEEEEEECTTSC--EEEECTTSCEEEECCSSCCCE
T ss_pred cCCeEEEEECC--e-EEEEEEEECCCCE--EEEEECCCCEEEEEeeEEEEe
Confidence 89999998743 3 89999999 5577 999999999998888865554
No 245
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.83 E-value=11 Score=30.78 Aligned_cols=28 Identities=21% Similarity=0.490 Sum_probs=19.2
Q ss_pred CCCCcccccccCCCCcCCCCCCccccCCC
Q 002926 219 RCDAAYHCYCQHPPHKNVSSGPYLCPKHT 247 (864)
Q Consensus 219 ~C~raYH~~CL~Ppl~svP~g~W~CP~C~ 247 (864)
.|+..||..|+...+.. ......||.|.
T Consensus 37 ~CgH~fC~~Ci~~~~~~-~~~~~~CP~Cr 64 (73)
T 2ysl_A 37 DCGHNFCLKCITQIGET-SCGFFKCPLCK 64 (73)
T ss_dssp TTCCEEEHHHHHHHCSS-SCSCCCCSSSC
T ss_pred CCCChhhHHHHHHHHHc-CCCCCCCCCCC
Confidence 79999999999854331 13456777765
No 246
>1m3v_A FLIN4, fusion of the LIM interacting domain of LDB1 and the N-terminal LIM domain of LMO4...; fusion protein, LMO proteins, metal binding protein; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=31.37 E-value=12 Score=34.21 Aligned_cols=45 Identities=18% Similarity=0.096 Sum_probs=21.0
Q ss_pred ccCCCCCCCCCCCccccccCccccCCCccc-ccccccccccccccc
Q 002926 249 CHSCGSNVPGNGLSVRWFLGYTCCDACGRL-FVKGNYCPVCLKVYR 293 (864)
Q Consensus 249 C~~CG~~~pgk~ls~rW~~~~~lC~~C~el-f~KgnyCpVC~K~Y~ 293 (864)
|..|+..........-+..+.++|..|... |.....|..|.+...
T Consensus 35 C~~C~~~L~~~~~~~~~~~g~~yC~~cy~~~f~~~~~C~~C~~~I~ 80 (122)
T 1m3v_A 35 CSSCQAQLGDIGTSSYTKSGMILCRNDYIRLFGNSGAGGSGGHMGS 80 (122)
T ss_dssp CSSSCCCTTTSEECCEEETTEEECHHHHHHHHCCCCSSSCSSCCSC
T ss_pred cCCCCCcccccCCeEEEECCeeecHHHHHHHcCCCCccccCCCCcC
Confidence 666765532111112233455677666532 222225777766543
No 247
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.20 E-value=7.5 Score=31.03 Aligned_cols=27 Identities=22% Similarity=0.507 Sum_probs=17.9
Q ss_pred CCCCcccccccCCCCcCCCCCCccccCC
Q 002926 219 RCDAAYHCYCQHPPHKNVSSGPYLCPKH 246 (864)
Q Consensus 219 ~C~raYH~~CL~Ppl~svP~g~W~CP~C 246 (864)
.|+..||..|+..-+.. ......||.|
T Consensus 37 ~CgH~fC~~Ci~~~~~~-~~~~~~CP~C 63 (63)
T 2ysj_A 37 DCGHNFCLKCITQIGET-SCGFFKCPLC 63 (63)
T ss_dssp TTSSEECHHHHHHHHHH-CSSCCCCSCC
T ss_pred CCCCcchHHHHHHHHHc-CCCCCcCcCC
Confidence 79999999999853321 1234567765
No 248
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=29.77 E-value=40 Score=28.45 Aligned_cols=42 Identities=17% Similarity=0.394 Sum_probs=22.8
Q ss_pred CceeccCCCCccccccCCCChHHHhhhccCCCCceeCCCCCCCCcC
Q 002926 299 PMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGECYQ 344 (864)
Q Consensus 299 ~MVqCD~C~~WfH~eCd~l~dE~y~~~gid~~~~Y~CptCr~~~~~ 344 (864)
..+.|..|.+.|-..- .-..-...-.....|.|..|......
T Consensus 44 ~~~~C~~C~~~f~~~~----~l~~H~~~h~~~~~~~C~~C~~~f~~ 85 (106)
T 2ee8_A 44 RPYTCDICHKAFRRQD----HLRDHRYIHSKEKPFKCQECGKGFCQ 85 (106)
T ss_dssp CCCBCSSSCCBCSCHH----HHHHHGGGSCCCCTTSCSSSCCCCSS
T ss_pred CCcCCCCccchhCCHH----HHHHHHHHhCCCCCeECCCcCCcccC
Confidence 4477888888774321 00000111223457999999865543
No 249
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=29.66 E-value=27 Score=31.46 Aligned_cols=33 Identities=15% Similarity=0.349 Sum_probs=22.0
Q ss_pred cccccccccccccCcccCCceeecCCCCccccccccccCc
Q 002926 144 NVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWA 183 (864)
Q Consensus 144 dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~ 183 (864)
...|.||...-. +-+.-..|+..|+..|+..+.
T Consensus 22 ~~~C~IC~~~~~-------~pv~~~~CgH~fC~~Ci~~~~ 54 (117)
T 1jm7_B 22 LLRCSRCTNILR-------EPVCLGGCEHIFCSNCVSDCI 54 (117)
T ss_dssp TTSCSSSCSCCS-------SCBCCCSSSCCBCTTTGGGGT
T ss_pred CCCCCCCChHhh-------CccEeCCCCCHHHHHHHHHHh
Confidence 348999986431 222222799999999998643
No 250
>2qqr_A JMJC domain-containing histone demethylation protein 3A; histone lysine demethylase, tandem hybrid tudor domains, metal binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 b.34.9.1 PDB: 2qqs_A* 2gfa_A* 2gf7_A*
Probab=29.66 E-value=67 Score=30.31 Aligned_cols=38 Identities=13% Similarity=0.255 Sum_probs=30.1
Q ss_pred cccceEEEEecCCCceeeeeeEEeecCeeEEEEEecCCcc
Q 002926 803 AIGKRVEVHQQSDNSWHKGVVTDTVEGTSTLSITLDDSRV 842 (864)
Q Consensus 803 a~~krvev~~~sd~~w~~g~v~~~~~~~~~~~v~~d~~~~ 842 (864)
.+|-||-... .++-.++|+|+.+ .-.....|+||||+.
T Consensus 7 ~vGq~V~akh-~ngryy~~~V~~~-~~~~~y~V~F~DgS~ 44 (118)
T 2qqr_A 7 TAGQKVISKH-KNGRFYQCEVVRL-TTETFYEVNFDDGSF 44 (118)
T ss_dssp CTTCEEEEEC-TTSSEEEEEEEEE-EEEEEEEEEETTSCE
T ss_pred ccCCEEEEEC-CCCCEEeEEEEEE-eeEEEEEEEcCCCCc
Confidence 5788888766 5788889999997 444568899999975
No 251
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=29.62 E-value=24 Score=31.54 Aligned_cols=26 Identities=15% Similarity=0.373 Sum_probs=18.4
Q ss_pred CCCCcccccccCCCCcCCCCCCccccCCC
Q 002926 219 RCDAAYHCYCQHPPHKNVSSGPYLCPKHT 247 (864)
Q Consensus 219 ~C~raYH~~CL~Ppl~svP~g~W~CP~C~ 247 (864)
.|+..|+..|+...+. .+...||.|.
T Consensus 32 ~CgH~fC~~Ci~~~~~---~~~~~CP~Cr 57 (115)
T 3l11_A 32 PCNHTLCKPCFQSTVE---KASLCCPFCR 57 (115)
T ss_dssp TTSCEECHHHHCCCCC---TTTSBCTTTC
T ss_pred CCCCHHhHHHHHHHHh---HCcCCCCCCC
Confidence 6899999999985442 2346777765
No 252
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=29.50 E-value=15 Score=35.16 Aligned_cols=43 Identities=21% Similarity=0.555 Sum_probs=28.3
Q ss_pred ccccccccccccccCcccCCceeecCCCCccccccccccCccccccCCCCCcCCCCC
Q 002926 143 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSC 199 (864)
Q Consensus 143 ~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~~~~~v~~~~W~CpeC 199 (864)
....|.||...-. ...+ ..|+..||..|+..+... ....||.|
T Consensus 77 ~~~~C~IC~~~~~------~pv~--~~CgH~fC~~Ci~~~~~~------~~~~CP~C 119 (150)
T 1z6u_A 77 QSFMCVCCQELVY------QPVT--TECFHNVCKDCLQRSFKA------QVFSCPAC 119 (150)
T ss_dssp HHTBCTTTSSBCS------SEEE--CTTSCEEEHHHHHHHHHT------TCCBCTTT
T ss_pred cCCEeecCChhhc------CCEE--cCCCCchhHHHHHHHHHh------CCCcCCCC
Confidence 3458999986431 1222 489999999999876542 33456665
No 253
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=28.91 E-value=29 Score=27.08 Aligned_cols=29 Identities=24% Similarity=0.623 Sum_probs=20.8
Q ss_pred ccccccccccCCCCCCceeccCCCCccccccCCC
Q 002926 284 YCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGI 317 (864)
Q Consensus 284 yCpVC~K~Y~D~dg~~MVqCD~C~~WfH~eCd~l 317 (864)
+|.+|.+..- ..++|..|...+|..|...
T Consensus 16 ~C~~C~~~l~-----qG~~C~~C~~~~H~~C~~~ 44 (52)
T 1faq_A 16 FCDICQKFLL-----NGFRCQTCGYKFHEHCSTK 44 (52)
T ss_dssp ECTTSSSEEC-----SEEECTTTTCCBCSTTSSS
T ss_pred CCCCcccccc-----cCCEeCCCCCeEChhHHhh
Confidence 4555544332 3589999999999999763
No 254
>3gj8_B Nuclear pore complex protein NUP153; G protein, GDP, RAN, zinc finger, acetylation, cytoplasm, GTP-binding, HOST-virus interaction; HET: GDP; 1.82A {Rattus norvegicus} PDB: 3gj4_B*
Probab=28.52 E-value=22 Score=31.69 Aligned_cols=18 Identities=39% Similarity=1.095 Sum_probs=0.0
Q ss_pred CCCcCCCCCc--------cccccccC
Q 002926 191 WSSWKCPSCR--------ICEICRRT 208 (864)
Q Consensus 191 ~~~W~CpeCk--------~C~VCgk~ 208 (864)
.+.|.|+.|. .|..|+.+
T Consensus 6 ~g~W~C~~C~~~N~~~~~~C~~C~~p 31 (92)
T 3gj8_B 6 VGSWECPVCCVSNKAEDSRCVSCTSE 31 (92)
T ss_dssp --------------------------
T ss_pred CcCCCCCcCCCEeccccceecccCCC
Confidence 5789999986 67777654
No 255
>2lk0_A RNA-binding protein 5; zinc finger; NMR {Homo sapiens} PDB: 2lk1_A*
Probab=28.13 E-value=21 Score=26.14 Aligned_cols=19 Identities=26% Similarity=0.847 Sum_probs=13.4
Q ss_pred CCCcCCCCCc--------cccccccCC
Q 002926 191 WSSWKCPSCR--------ICEICRRTG 209 (864)
Q Consensus 191 ~~~W~CpeCk--------~C~VCgk~g 209 (864)
.++|.|+.|. .|+.|+.+.
T Consensus 3 ~gDW~C~~C~~~Nfa~r~~C~~C~~pr 29 (32)
T 2lk0_A 3 FEDWLCNKCCLNNFRKRLKCFRCGADK 29 (32)
T ss_dssp CSEEECTTTCCEEETTCCBCTTTCCBT
T ss_pred CCCCCcCcCcCCcChhcceecCCCCcC
Confidence 4789999885 566666543
No 256
>4a53_A EDC3; RNA binding protein; NMR {Schizosaccharomyces pombe} PDB: 4a54_A
Probab=27.56 E-value=45 Score=31.82 Aligned_cols=31 Identities=35% Similarity=0.441 Sum_probs=26.2
Q ss_pred ccccceEEEEecCCCceeeeeeEEeecCeeEE
Q 002926 802 DAIGKRVEVHQQSDNSWHKGVVTDTVEGTSTL 833 (864)
Q Consensus 802 da~~krvev~~~sd~~w~~g~v~~~~~~~~~~ 833 (864)
+-||-.|+|.+ .|++=.+|+|++|.+-..+|
T Consensus 9 qFlGy~V~v~L-kDgs~~qG~I~~vd~k~LtL 39 (125)
T 4a53_A 9 DFYGSNVEVLL-NNDSKARGVITNFDSSNSIL 39 (125)
T ss_dssp HHTTCEEEEEE-TTSCEEEEEEEEEETTTTEE
T ss_pred HhcCceEEEEE-CCCCEeeEEEEeecCCeeEE
Confidence 45899999999 59999999999998766444
No 257
>2k1p_A Zinc finger RAN-binding domain-containing protein 2; ZNF265, RNA binding, ranbp2, RBZ, ZIS, alternative splicing, metal-binding, mRNA processing; NMR {Homo sapiens} PDB: 3g9y_A
Probab=27.53 E-value=35 Score=25.14 Aligned_cols=18 Identities=28% Similarity=1.130 Sum_probs=12.6
Q ss_pred CCCcCCCCCc--------cccccccC
Q 002926 191 WSSWKCPSCR--------ICEICRRT 208 (864)
Q Consensus 191 ~~~W~CpeCk--------~C~VCgk~ 208 (864)
.++|.|+.|. .|..|+.+
T Consensus 4 ~gDW~C~~C~~~Nfa~R~~C~~C~~p 29 (33)
T 2k1p_A 4 ANDWQCKTCSNVNWARRSECNMCNTP 29 (33)
T ss_dssp SSSCBCSSSCCBCCTTCSBCSSSCCB
T ss_pred CCCcccCCCCCccccccccccccCCc
Confidence 5789999885 55555544
No 258
>2ehe_A Four and A half LIM domains 3; FHL-3, skeletal muscle LIM- protein 2, SLIM 2, FHL3, SLIM2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.49 E-value=78 Score=26.38 Aligned_cols=13 Identities=15% Similarity=0.529 Sum_probs=7.7
Q ss_pred cCCCcccCCCCCC
Q 002926 244 PKHTKCHSCGSNV 256 (864)
Q Consensus 244 P~C~~C~~CG~~~ 256 (864)
+.|..|..|+...
T Consensus 41 ~~CF~C~~C~~~L 53 (82)
T 2ehe_A 41 EGCFRCCRCQRSL 53 (82)
T ss_dssp TTTSBCTTTCCBC
T ss_pred ccCCeecCCCCcc
Confidence 4455577776543
No 259
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.94 E-value=16 Score=29.92 Aligned_cols=25 Identities=12% Similarity=0.250 Sum_probs=17.3
Q ss_pred CCCCcccccccCCCCcCCCCCCccccCCC
Q 002926 219 RCDAAYHCYCQHPPHKNVSSGPYLCPKHT 247 (864)
Q Consensus 219 ~C~raYH~~CL~Ppl~svP~g~W~CP~C~ 247 (864)
.|+..||..|+..-+.. ...||.|.
T Consensus 32 ~CgH~fC~~Ci~~~~~~----~~~CP~Cr 56 (71)
T 2d8t_A 32 PCKHVFCYLCVKGASWL----GKRCALCR 56 (71)
T ss_dssp TTTEEEEHHHHHHCTTC----SSBCSSSC
T ss_pred cCCCHHHHHHHHHHHHC----CCcCcCcC
Confidence 58999999999853321 25677764
No 260
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=26.46 E-value=22 Score=32.81 Aligned_cols=28 Identities=25% Similarity=0.602 Sum_probs=22.7
Q ss_pred cccccCccccCCCccccccccccccccc
Q 002926 263 VRWFLGYTCCDACGRLFVKGNYCPVCLK 290 (864)
Q Consensus 263 ~rW~~~~~lC~~C~elf~KgnyCpVC~K 290 (864)
..|...+..|..|...|.+.-+||-|..
T Consensus 42 L~~~g~~~hC~~C~~~f~~~a~CPdC~q 69 (101)
T 2jne_A 42 LDQDNGHARCRSCGEFIEMKALCPDCHQ 69 (101)
T ss_dssp EEEETTEEEETTTCCEEEEEEECTTTCS
T ss_pred ceecCCEEECccccchhhccccCcchhh
Confidence 4577777789999998888888988864
No 261
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=25.60 E-value=19 Score=28.94 Aligned_cols=36 Identities=17% Similarity=0.336 Sum_probs=22.5
Q ss_pred ccccccccc-ccccCcccCCceeecCCCCccccccccccCc
Q 002926 144 NVMCRLCFV-GENEGCERARRMLSCKSCGKKYHRNCLKNWA 183 (864)
Q Consensus 144 dd~C~vC~~-gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~ 183 (864)
+..|.+|.. .-. .+...+.=..|+..||..|+..+.
T Consensus 3 ~~~C~IC~~~~~~----~~~~~~~~~~CgH~fC~~Ci~~~~ 39 (65)
T 1g25_A 3 DQGCPRCKTTKYR----NPSLKLMVNVCGHTLCESCVDLLF 39 (65)
T ss_dssp TTCCSTTTTHHHH----CSSCCEEECTTCCCEEHHHHHHHH
T ss_pred CCcCCcCCCCccC----CCccCeecCCCCCHhHHHHHHHHH
Confidence 347999987 221 111111124899999999998753
No 262
>2cuq_A Four and A half LIM domains 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=25.57 E-value=57 Score=27.03 Aligned_cols=13 Identities=15% Similarity=0.526 Sum_probs=7.4
Q ss_pred cCCCcccCCCCCC
Q 002926 244 PKHTKCHSCGSNV 256 (864)
Q Consensus 244 P~C~~C~~CG~~~ 256 (864)
+.|..|..|+...
T Consensus 39 ~~CF~C~~C~~~L 51 (80)
T 2cuq_A 39 RECLVCTGCQTPL 51 (80)
T ss_dssp TTTCBCSSSCCBC
T ss_pred hhhCCcccCCCcC
Confidence 3455577776554
No 263
>3bdl_A Staphylococcal nuclease domain-containing protein 1; staphylococcal nuclease OB fold, tudor domain, cytoplasm, HOST-virus interaction, nucleus; HET: CIT; 1.90A {Homo sapiens}
Probab=25.49 E-value=79 Score=36.28 Aligned_cols=51 Identities=12% Similarity=0.132 Sum_probs=39.0
Q ss_pred cccceEEEEecCCCceeeeeeEEeecCeeEEEEEecC-CcccceecCceeeEeeec
Q 002926 803 AIGKRVEVHQQSDNSWHKGVVTDTVEGTSTLSITLDD-SRVKTLELGKQGVRFVPQ 857 (864)
Q Consensus 803 a~~krvev~~~sd~~w~~g~v~~~~~~~~~~~v~~d~-~~~~~~~~gk~~vr~~~~ 857 (864)
.+|.-+-+... ||.|+-++|..|... .++.|.|-| |..+++.+- .+|.||.
T Consensus 413 ~~G~~c~a~~~-d~~wyRa~I~~v~~~-~~~~V~fvDyGn~e~v~~~--~Lr~l~~ 464 (570)
T 3bdl_A 413 RRGEFCIAKFV-DGEWYRARVEKVESP-AKIHVFYIDYGNREVLPST--RLGTLSP 464 (570)
T ss_dssp CTTCEEEEECT-TSCEEEEEEEEEEET-TEEEEEETTTCCEEEECGG--GEECCCG
T ss_pred CcCCEEEEEEC-CCCEEEEEEEEEcCC-CeEEEEEEeCCCeEEEEHH--HCccCCH
Confidence 47888888886 999999999999872 237777655 988887653 4777764
No 264
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.16 E-value=12 Score=30.15 Aligned_cols=27 Identities=15% Similarity=0.284 Sum_probs=18.4
Q ss_pred CCCCCcccccccCCCCcCCCCCCccccCCC
Q 002926 218 RRCDAAYHCYCQHPPHKNVSSGPYLCPKHT 247 (864)
Q Consensus 218 d~C~raYH~~CL~Ppl~svP~g~W~CP~C~ 247 (864)
..|+..||..|+...+. .....||.|.
T Consensus 31 ~~CgH~fC~~Ci~~~~~---~~~~~CP~Cr 57 (66)
T 2ecy_A 31 TECGHRFCESCMAALLS---SSSPKCTACQ 57 (66)
T ss_dssp CSSSCCCCHHHHHHHHT---TSSCCCTTTC
T ss_pred CCCCCHHHHHHHHHHHH---hCcCCCCCCC
Confidence 37899999999985432 2345677764
No 265
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=25.02 E-value=54 Score=26.98 Aligned_cols=33 Identities=24% Similarity=0.559 Sum_probs=21.7
Q ss_pred ccccccccccCCCCCCceeccCCCCccccccCCC
Q 002926 284 YCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGI 317 (864)
Q Consensus 284 yCpVC~K~Y~D~dg~~MVqCD~C~~WfH~eCd~l 317 (864)
+|.+|.+..-. -...-++|..|...+|..|...
T Consensus 25 ~C~~C~~~l~G-l~~qg~~C~~C~~~~Hk~C~~~ 57 (65)
T 2enz_A 25 FCEHCGTLLWG-LARQGLKCDACGMNVHHRCQTK 57 (65)
T ss_dssp BCSSSCCBCCC-SSSCSEEESSSCCEECTTTTTT
T ss_pred CchhcChhhee-cCCcccccCCCCCccCHhHHhh
Confidence 45555443311 1234588999999999999763
No 266
>2l4z_A DNA endonuclease RBBP8, LIM domain transcription LMO4; protein-protein interaction, LIM-interaction DOM LMO4, RBBP8/CTIP, LIM-only protein; HET: DNA; NMR {Homo sapiens}
Probab=24.43 E-value=30 Score=32.01 Aligned_cols=28 Identities=18% Similarity=0.437 Sum_probs=12.7
Q ss_pred cccccccCCCCCceeecCCCCCcccccccC
Q 002926 201 ICEICRRTGDPNKFMFCRRCDAAYHCYCQH 230 (864)
Q Consensus 201 ~C~VCgk~gd~~~LL~Cd~C~raYH~~CL~ 230 (864)
.|..|+++-....++. .-++.||..|..
T Consensus 63 ~C~~C~~~I~~~~~v~--a~~~~wH~~CF~ 90 (123)
T 2l4z_A 63 RCAGCGGKIADRFLLY--AMDSYWHSRCLK 90 (123)
T ss_dssp BBSSSSSBCCSSSEEE--ETTEEEETTTSB
T ss_pred cCcCCCCCcCCcEEEE--eCCcEEcccccC
Confidence 4445555443222222 245667755543
No 267
>2d8y_A Eplin protein; LIM domain, epithelial protein LOST in neoplasm, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=24.11 E-value=41 Score=28.88 Aligned_cols=28 Identities=21% Similarity=0.458 Sum_probs=13.3
Q ss_pred cccccccCCCCCceeecCCCCCcccccccC
Q 002926 201 ICEICRRTGDPNKFMFCRRCDAAYHCYCQH 230 (864)
Q Consensus 201 ~C~VCgk~gd~~~LL~Cd~C~raYH~~CL~ 230 (864)
.|..|++.-.+..++ ..-++.||..|..
T Consensus 17 ~C~~C~~~I~~~~~v--~a~~~~~H~~CF~ 44 (91)
T 2d8y_A 17 TCVECQKTVYPMERL--LANQQVFHISCFR 44 (91)
T ss_dssp BCTTTCCBCCTTSEE--ECSSSEEETTTCB
T ss_pred cCccCCCccCCceeE--EECCCEECCCCCe
Confidence 344555554332333 2445666655543
No 268
>2vc8_A Enhancer of mRNA-decapping protein 3; P-BODY component, cytoplasm, SM-like protein, protein-binding; 1.31A {Homo sapiens}
Probab=24.03 E-value=1e+02 Score=27.67 Aligned_cols=47 Identities=17% Similarity=0.250 Sum_probs=32.6
Q ss_pred hhhhHHHHHHhccccccceEEEEecCCCceeeeeeEEee--cCeeEEEEEecCCcccc
Q 002926 789 IMDANWILKKLGKDAIGKRVEVHQQSDNSWHKGVVTDTV--EGTSTLSITLDDSRVKT 844 (864)
Q Consensus 789 ~~d~~~il~~lg~da~~krvev~~~sd~~w~~g~v~~~~--~~~~~~~v~~d~~~~~~ 844 (864)
+|++.| ||+-|-|+--+|---+||.|++|- ++|=+|.=-|-||-..+
T Consensus 2 ~Ma~~~---------iGs~VSi~c~d~lGvYQG~i~~vd~~~~tItL~~~f~NG~~~~ 50 (84)
T 2vc8_A 2 AMATDW---------LGSIVSINCGDSLGVYQGRVSAVDQVSQTISLTRPFHNGVKCL 50 (84)
T ss_dssp ---CTT---------TTCEEEEECCTTTCEEEEEEEEEETTTTEEEEEEEEETTEECS
T ss_pred cccccc---------cCCEEEEEECCCceEEEEEEEEeccCCCeEEEehhhhCCCCCC
Confidence 466666 699999999777779999999997 55544444466665433
No 269
>1x63_A Skeletal muscle LIM-protein 1; LIM domain, four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=24.02 E-value=51 Score=27.45 Aligned_cols=13 Identities=15% Similarity=0.519 Sum_probs=7.8
Q ss_pred cCCCcccCCCCCC
Q 002926 244 PKHTKCHSCGSNV 256 (864)
Q Consensus 244 P~C~~C~~CG~~~ 256 (864)
+.|..|..|+...
T Consensus 41 ~~CF~C~~C~~~L 53 (82)
T 1x63_A 41 KDCFTCSNCKQVI 53 (82)
T ss_dssp TTTCCCSSSCCCC
T ss_pred cccCchhhCCCcc
Confidence 4455577776554
No 270
>2cu8_A Cysteine-rich protein 2; CRP2, CRIP2, ESP1 protein, zinc-binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=23.96 E-value=48 Score=27.34 Aligned_cols=28 Identities=18% Similarity=0.362 Sum_probs=13.3
Q ss_pred cccccccCCCCCceeecCCCCCcccccccC
Q 002926 201 ICEICRRTGDPNKFMFCRRCDAAYHCYCQH 230 (864)
Q Consensus 201 ~C~VCgk~gd~~~LL~Cd~C~raYH~~CL~ 230 (864)
.|..|+++-.+..++. .-++.||..|..
T Consensus 11 ~C~~C~~~I~~~~~v~--a~~~~~H~~CF~ 38 (76)
T 2cu8_A 11 KCPKCDKTVYFAEKVS--SLGKDWHKFCLK 38 (76)
T ss_dssp BCTTTCCBCCTTTEEE--ETTEEEETTTCB
T ss_pred CCcCCCCEeECCeEEE--ECCeEeeCCCCC
Confidence 3455565544333332 235566655443
No 271
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=23.92 E-value=66 Score=26.45 Aligned_cols=44 Identities=14% Similarity=0.240 Sum_probs=23.2
Q ss_pred CCceeccCCCCccccccCCCChHHHhhhcc-CCCCceeCCCCCCCCcC
Q 002926 298 TPMVCCDVCQRWVHCQCDGISDEKYLQFQV-DGNLQYRCPTCRGECYQ 344 (864)
Q Consensus 298 ~~MVqCD~C~~WfH~eCd~l~dE~y~~~gi-d~~~~Y~CptCr~~~~~ 344 (864)
...+.|..|.+.|-..-. + ..-.+.-. .....|.|+.|......
T Consensus 33 ~~~~~C~~C~~~f~~~~~-l--~~H~~~h~~~~~~~~~C~~C~~~f~~ 77 (95)
T 2yt9_A 33 EKPYSCPVCGLRFKRKDR-M--SYHVRSHDGSVGKPYICQSCGKGFSR 77 (95)
T ss_dssp SCSEECSSSCCEESCHHH-H--HHHHHHHCCCCCSSBCCSSSCCCBSS
T ss_pred CCCCcCCCCCCccCCHHH-H--HHHHHHhcCCCCCceECCCccchhCC
Confidence 345789989887743210 0 00111111 11257999999865443
No 272
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=23.50 E-value=12 Score=33.98 Aligned_cols=26 Identities=15% Similarity=0.414 Sum_probs=17.6
Q ss_pred CCCCcccccccCCCCcCCCCCCccccCCC
Q 002926 219 RCDAAYHCYCQHPPHKNVSSGPYLCPKHT 247 (864)
Q Consensus 219 ~C~raYH~~CL~Ppl~svP~g~W~CP~C~ 247 (864)
.|+..||..|+...+. .....||.|.
T Consensus 69 ~CgH~fC~~Ci~~~~~---~~~~~CP~Cr 94 (124)
T 3fl2_A 69 VCQHNVCKDCLDRSFR---AQVFSCPACR 94 (124)
T ss_dssp TTSCEEEHHHHHHHHH---TTCCBCTTTC
T ss_pred eCCCcccHHHHHHHHh---HCcCCCCCCC
Confidence 6888888889874332 2345777775
No 273
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=23.16 E-value=60 Score=26.72 Aligned_cols=41 Identities=15% Similarity=0.332 Sum_probs=22.7
Q ss_pred CceeccCCCCccccccCCCChHHHhhhccCCCCceeCCCCCCCCc
Q 002926 299 PMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGECY 343 (864)
Q Consensus 299 ~MVqCD~C~~WfH~eCd~l~dE~y~~~gid~~~~Y~CptCr~~~~ 343 (864)
..+.|..|...|-..-. + ..-... -.....|.|..|.....
T Consensus 35 ~~~~C~~C~~~f~~~~~-l--~~H~~~-h~~~~~~~C~~C~~~f~ 75 (96)
T 2dmd_A 35 KPYKCKTCDYAAADSSS-L--NKHLRI-HSDERPFKCQICPYASR 75 (96)
T ss_dssp CSEECSSSCCEESSHHH-H--HHHHHH-SCCCCCEECSSSSCEES
T ss_pred CCEeCCCCCCccCCHHH-H--HHHHHH-hCCCCCccCCCCCCccC
Confidence 45788889887744210 0 001111 12345799999986543
No 274
>2dkt_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.89.1.1 g.93.1.1 PDB: 2k2c_A
Probab=23.11 E-value=75 Score=30.92 Aligned_cols=33 Identities=27% Similarity=0.910 Sum_probs=17.5
Q ss_pred ccCCCccccccccccccccccccCCCCCCceeccCCC
Q 002926 271 CCDACGRLFVKGNYCPVCLKVYRDSESTPMVCCDVCQ 307 (864)
Q Consensus 271 lC~~C~elf~KgnyCpVC~K~Y~D~dg~~MVqCD~C~ 307 (864)
.|..|...|.+. ||.+|. .|+ +..+..-|+.|.
T Consensus 73 ~C~~Cg~~f~~Y-~C~~C~-l~d--~~k~~yHC~~Cg 105 (143)
T 2dkt_A 73 TCEDCSTLFGEY-YCSICH-LFD--KDKRQYHCESCG 105 (143)
T ss_dssp BCSSSCCBSCSE-ECSSSC-CEE--CSSSEEEETTTT
T ss_pred cCCCCCccceee-Eeceee-ccc--CCCceecCCCCC
Confidence 455566555444 677774 332 234455566654
No 275
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=22.64 E-value=27 Score=31.52 Aligned_cols=35 Identities=14% Similarity=0.631 Sum_probs=24.5
Q ss_pred cccccccccccccccCcccCCceeecCCCCccccccccccCcc
Q 002926 142 NTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQ 184 (864)
Q Consensus 142 ~~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~ 184 (864)
.....|.+|...-. +-+.. .|+..|+..|+..+..
T Consensus 16 ~~~~~C~IC~~~~~-------~p~~~-~CgH~fC~~Ci~~~~~ 50 (118)
T 3hct_A 16 ESKYECPICLMALR-------EAVQT-PCGHRFCKACIIKSIR 50 (118)
T ss_dssp CGGGBCTTTCSBCS-------SEEEC-TTSCEEEHHHHHHHHH
T ss_pred CCCCCCCcCChhhc-------CeEEC-CcCChhhHHHHHHHHh
Confidence 34568999986431 22332 7999999999987654
No 276
>2egq_A FHL1 protein; LIM domain, four and A half LIM domains protein 1, skeletal muscle LIM- protein 1, SLIM 1, structural genomics NPPSFA; NMR {Homo sapiens}
Probab=22.44 E-value=61 Score=26.64 Aligned_cols=12 Identities=25% Similarity=0.659 Sum_probs=6.7
Q ss_pred CCCcccCCCCCC
Q 002926 245 KHTKCHSCGSNV 256 (864)
Q Consensus 245 ~C~~C~~CG~~~ 256 (864)
.|..|..|+...
T Consensus 45 ~CF~C~~C~~~L 56 (77)
T 2egq_A 45 YCFHCKKCSVNL 56 (77)
T ss_dssp TTCBCSSSCCBC
T ss_pred ccCEehhcCCCC
Confidence 344466676543
No 277
>1iml_A CRIP, cysteine rich intestinal protein; metal-binding protein, LIM domain protein; NMR {Rattus rattus} SCOP: g.39.1.3 g.39.1.3
Probab=22.31 E-value=44 Score=27.59 Aligned_cols=28 Identities=14% Similarity=0.244 Sum_probs=14.0
Q ss_pred cccccccCCCCCceeecCCCCCcccccccC
Q 002926 201 ICEICRRTGDPNKFMFCRRCDAAYHCYCQH 230 (864)
Q Consensus 201 ~C~VCgk~gd~~~LL~Cd~C~raYH~~CL~ 230 (864)
.|..|+++-....++.-. ++.||..|..
T Consensus 2 ~C~~C~~~I~~~~~v~a~--~~~~H~~CF~ 29 (76)
T 1iml_A 2 KCPKCDKEVYFAERVTSL--GKDWHRPCLK 29 (76)
T ss_dssp BCTTTSSBCCGGGEEEET--TEEEETTTCB
T ss_pred cCCCCCCEEECceEEEEC--CccccCCCCC
Confidence 355666654433333322 5667755543
No 278
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.29 E-value=63 Score=28.15 Aligned_cols=34 Identities=26% Similarity=0.450 Sum_probs=22.4
Q ss_pred cccccccccccCCCCCCceeccCCCCccccccCCC
Q 002926 283 NYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGI 317 (864)
Q Consensus 283 nyCpVC~K~Y~D~dg~~MVqCD~C~~WfH~eCd~l 317 (864)
-||.+|.+..-. -...-++|..|...+|..|...
T Consensus 29 t~C~~C~~~l~G-l~kqG~~C~~C~~~~Hk~C~~~ 62 (85)
T 2eli_A 29 TFCDHCGSLLYG-LIHQGMKCDTCDMNVHKQCVIN 62 (85)
T ss_dssp CBCSSSCCBCCC-SSSCEEECSSSCCEEETTTTTT
T ss_pred cCCcccCccccc-cccCCCcCCCcCCccCHhHHhh
Confidence 345555543311 1235688999999999999774
No 279
>1wgs_A MYST histone acetyltransferase 1; tudor domain, MYST family, struct genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.34.13.3
Probab=22.16 E-value=1.1e+02 Score=29.10 Aligned_cols=35 Identities=20% Similarity=0.415 Sum_probs=30.2
Q ss_pred cccceEEEEecCCCceeeeeeEEeec----CeeEEEEEec
Q 002926 803 AIGKRVEVHQQSDNSWHKGVVTDTVE----GTSTLSITLD 838 (864)
Q Consensus 803 a~~krvev~~~sd~~w~~g~v~~~~~----~~~~~~v~~d 838 (864)
.||.+|.|... |+.||...|..|.. |.-.+.|-|.
T Consensus 14 ~vGe~v~~~~~-d~~~y~AkIl~i~~~~~~~~~~YyVHY~ 52 (133)
T 1wgs_A 14 EIGETYLCRRP-DSTWHSAEVIQSRVNDQEGREEFYVHYV 52 (133)
T ss_dssp CTTSEEEEEET-TTEEEEEEEEEEEEETTTTEEEEEEECT
T ss_pred CCCCEEEEEeC-CCCEEEEEEEEEEeccCCCceEEEEecc
Confidence 58999999995 89999999999863 6778899876
No 280
>1j2o_A FLIN2, fusion of rhombotin-2 and LIM domain-binding protein 1; LIM-interaction-domain (LID), metal binding protein; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=22.13 E-value=66 Score=28.89 Aligned_cols=32 Identities=22% Similarity=0.410 Sum_probs=14.2
Q ss_pred CCCcccCCCCCCCCCCCccccccCccccCCCc
Q 002926 245 KHTKCHSCGSNVPGNGLSVRWFLGYTCCDACG 276 (864)
Q Consensus 245 ~C~~C~~CG~~~pgk~ls~rW~~~~~lC~~C~ 276 (864)
.|..|..|+......+...-+..+.++|..|.
T Consensus 29 ~CF~C~~C~~~L~~~g~~~~~~~g~~yC~~~y 60 (114)
T 1j2o_A 29 DCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDY 60 (114)
T ss_dssp TTCCCSSSCSCCCCSSSCCCCBTTBCCCHHHH
T ss_pred hcCcccccCCchhcCCCeeEEECCeeechHHH
Confidence 34446777655432111122233455665554
No 281
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=22.03 E-value=56 Score=26.03 Aligned_cols=32 Identities=16% Similarity=0.399 Sum_probs=16.7
Q ss_pred eecCCCCCcccccccCCC-CcCCCCCCccccCCC
Q 002926 215 MFCRRCDAAYHCYCQHPP-HKNVSSGPYLCPKHT 247 (864)
Q Consensus 215 L~Cd~C~raYH~~CL~Pp-l~svP~g~W~CP~C~ 247 (864)
.+|..|+-.|...=-+|. ...+ ...|.||.|-
T Consensus 5 y~C~vCGyvyd~~~Gd~t~f~~l-P~dw~CP~Cg 37 (46)
T 6rxn_A 5 YVCNVCGYEYDPAEHDNVPFDQL-PDDWCCPVCG 37 (46)
T ss_dssp EEETTTCCEECGGGGTTCCGGGS-CTTCBCTTTC
T ss_pred EECCCCCeEEeCCcCCCcchhhC-CCCCcCcCCC
Confidence 456666666653322221 1122 3569999874
No 282
>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}
Probab=22.02 E-value=38 Score=28.16 Aligned_cols=33 Identities=21% Similarity=0.396 Sum_probs=24.2
Q ss_pred ccccccccccccCCCCCCceeccCCCCccccccCC
Q 002926 282 GNYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDG 316 (864)
Q Consensus 282 gnyCpVC~K~Y~D~dg~~MVqCD~C~~WfH~eCd~ 316 (864)
..+|.+|.+... .+...+.|..|....|..|-.
T Consensus 19 ~~~C~~Cg~~i~--~gkq~~kC~dC~~~cH~~C~~ 51 (61)
T 4b6d_A 19 PESCVPCGKRIK--FGKLSLKCRDCRVVSHPECRD 51 (61)
T ss_dssp CEECTTTCCEEC--TTCEEEEESSSSCEECGGGGG
T ss_pred CcccccccCEEE--EeeEeeECCCCCCeEchhHhh
Confidence 346777766542 345678899999999999954
No 283
>1r79_A Diacylglycerol kinase, delta; C1 domain, cystein-rich zinc binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: g.49.1.1
Probab=21.86 E-value=38 Score=30.01 Aligned_cols=33 Identities=27% Similarity=0.465 Sum_probs=23.4
Q ss_pred ccccccccccCCCCCCceeccCCCCccccccCC
Q 002926 284 YCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDG 316 (864)
Q Consensus 284 yCpVC~K~Y~D~dg~~MVqCD~C~~WfH~eCd~ 316 (864)
+|.+|.+.-.......-+.|.-|.+-+|..|..
T Consensus 40 ~C~vC~k~c~s~~~L~g~rC~WCq~~VH~~C~~ 72 (84)
T 1r79_A 40 KCTVCDKTCGSVLRLQDWRCLWCKAMVHTSCKE 72 (84)
T ss_dssp BCSSSCCBCCCTTTCCCEEESSSCCEECHHHHH
T ss_pred EeCCCCCEeCCccCCCCCCCcccChhHHHHHHH
Confidence 567777654333344557899999999999954
No 284
>2dkt_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.89.1.1 g.93.1.1 PDB: 2k2c_A
Probab=21.66 E-value=50 Score=32.18 Aligned_cols=19 Identities=32% Similarity=0.843 Sum_probs=9.0
Q ss_pred cccccCCCCCceeecCCCCC
Q 002926 203 EICRRTGDPNKFMFCRRCDA 222 (864)
Q Consensus 203 ~VCgk~gd~~~LL~Cd~C~r 222 (864)
.+|+.++ ......|+.|+.
T Consensus 105 giCR~G~-~~~ffHC~~C~~ 123 (143)
T 2dkt_A 105 GICRIGP-KEDFFHCLKCNL 123 (143)
T ss_dssp TEEEESC-GGGEEEETTTTE
T ss_pred CceeccC-CcCcEECCcCCe
Confidence 3444333 234556666654
No 285
>2eay_A Biotin [acetyl-COA-carboxylase] ligase; biotin biosynthesis, dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.95A {Aquifex aeolicus} PDB: 3efs_A* 3fjp_A 3efr_A*
Probab=21.44 E-value=53 Score=33.49 Aligned_cols=44 Identities=18% Similarity=0.301 Sum_probs=35.0
Q ss_pred ccceEEEEecCCCceeeeeeEEe-ecCeeEEEEEecCCcccceecCceeeE
Q 002926 804 IGKRVEVHQQSDNSWHKGVVTDT-VEGTSTLSITLDDSRVKTLELGKQGVR 853 (864)
Q Consensus 804 ~~krvev~~~sd~~w~~g~v~~~-~~~~~~~~v~~d~~~~~~~~~gk~~vr 853 (864)
+|++|.|+.+ +. ..|++..| -.|. |.|..+||. +++-.|-=.+|
T Consensus 187 ~g~~V~v~~~--~~-~~G~~~gId~~G~--L~v~~~~G~-~~~~~Gev~~r 231 (233)
T 2eay_A 187 LGEEVKLLGE--GK-ITGKLVGLSEKGG--ALILTEEGI-KEILSGEFSLR 231 (233)
T ss_dssp TTSEEEETTE--EE-EEEEEEEECTTSC--EEEEETTEE-EEECSCCEEEC
T ss_pred cCCEEEEEEC--Ce-EEEEEEEECCCCe--EEEEECCCe-EEEEEeEEEEe
Confidence 7999999864 33 89999999 5577 999999998 88877754443
No 286
>1x6a_A LIMK-2, LIM domain kinase 2; LIM-kinase 2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=21.35 E-value=71 Score=26.56 Aligned_cols=13 Identities=31% Similarity=0.692 Sum_probs=8.3
Q ss_pred cCCCcccCCCCCC
Q 002926 244 PKHTKCHSCGSNV 256 (864)
Q Consensus 244 P~C~~C~~CG~~~ 256 (864)
+.|..|..|+...
T Consensus 39 ~~CF~C~~C~~~L 51 (81)
T 1x6a_A 39 PECFACMSCKVII 51 (81)
T ss_dssp TTSCBCTTTCCBC
T ss_pred cccCCccCCCCcc
Confidence 5566677776553
No 287
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=21.27 E-value=43 Score=25.82 Aligned_cols=34 Identities=21% Similarity=0.471 Sum_probs=22.2
Q ss_pred cccccccccccCCCCCCceeccCCCCccccccCCC
Q 002926 283 NYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGI 317 (864)
Q Consensus 283 nyCpVC~K~Y~D~dg~~MVqCD~C~~WfH~eCd~l 317 (864)
.+|.+|.+..-. -....++|..|...+|..|...
T Consensus 12 t~C~~C~~~l~g-~~~qg~~C~~C~~~~H~~C~~~ 45 (50)
T 1ptq_A 12 TFCDHCGSLLWG-LVKQGLKCEDCGMNVHHKCREK 45 (50)
T ss_dssp CBCTTTCCBCCS-SSSCEEEETTTCCEECHHHHTT
T ss_pred CCcCCCCceeec-cCCccCEeCCCCCeECHHHhhh
Confidence 345555543311 1235688999999999999763
No 288
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=21.17 E-value=55 Score=25.75 Aligned_cols=22 Identities=18% Similarity=0.372 Sum_probs=14.0
Q ss_pred CCCCcccccccCCCCcCCCCCCccccCCC
Q 002926 219 RCDAAYHCYCQHPPHKNVSSGPYLCPKHT 247 (864)
Q Consensus 219 ~C~raYH~~CL~Ppl~svP~g~W~CP~C~ 247 (864)
.|+..|+..|+.. ....||.|.
T Consensus 23 ~CgH~fC~~Ci~~-------~~~~CP~Cr 44 (56)
T 1bor_A 23 PCLHTLCSGCLEA-------SGMQCPICQ 44 (56)
T ss_dssp TTSCCSBTTTCSS-------SSSSCSSCC
T ss_pred CCCCcccHHHHcc-------CCCCCCcCC
Confidence 4677777777764 234577664
No 289
>1wig_A KIAA1808 protein; LIM domain, zinc finger, metal-binding protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=21.07 E-value=81 Score=26.06 Aligned_cols=13 Identities=31% Similarity=0.779 Sum_probs=7.5
Q ss_pred cCCCcccCCCCCC
Q 002926 244 PKHTKCHSCGSNV 256 (864)
Q Consensus 244 P~C~~C~~CG~~~ 256 (864)
+.|..|..|+...
T Consensus 29 ~~CF~C~~C~~~L 41 (73)
T 1wig_A 29 PSCALCVRCGQMF 41 (73)
T ss_dssp TTTSCCSSSCCCC
T ss_pred CCcCEeCCCCCCC
Confidence 4455577776543
No 290
>2eqk_A Tudor domain-containing protein 4; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.00 E-value=1.7e+02 Score=26.29 Aligned_cols=50 Identities=18% Similarity=0.272 Sum_probs=39.9
Q ss_pred ccceEEEEecCCCceeeeeeEEeecCeeEEEEE-ecCCcccceecCceeeEeee
Q 002926 804 IGKRVEVHQQSDNSWHKGVVTDTVEGTSTLSIT-LDDSRVKTLELGKQGVRFVP 856 (864)
Q Consensus 804 ~~krvev~~~sd~~w~~g~v~~~~~~~~~~~v~-~d~~~~~~~~~gk~~vr~~~ 856 (864)
.|.=|-+.-+-||.|+.|.|..|+..+. +-|- +|=|.++++-... +|=|+
T Consensus 24 ~g~~vaak~~d~n~WyRakV~~v~~~~~-veVl~~DyGn~~~V~~~~--LR~L~ 74 (85)
T 2eqk_A 24 NDMHCAVKIQDKNQWRRGQIIRMVTDTL-VEVLLYDVGVELVVNVDC--LRKLE 74 (85)
T ss_dssp SSCEEEEECSSSCCEEEEEEEEECSSSE-EEEECTTTCCEEEEETTT--EEECC
T ss_pred CCCEEEEEeCCCCeEEEEEEEEecCCCe-EEEEEEccCCEEEEEccc--cccCC
Confidence 5777778888888999999999999876 6655 5779999998774 66654
No 291
>2l8d_A Lamin-B receptor; DNA binding protein; NMR {Gallus gallus}
Probab=20.34 E-value=1.9e+02 Score=24.89 Aligned_cols=46 Identities=15% Similarity=0.047 Sum_probs=39.1
Q ss_pred ccccceEEEEecCCCceeeeeeEEeecCeeEEEEEecCCcccceec
Q 002926 802 DAIGKRVEVHQQSDNSWHKGVVTDTVEGTSTLSITLDDSRVKTLEL 847 (864)
Q Consensus 802 da~~krvev~~~sd~~w~~g~v~~~~~~~~~~~v~~d~~~~~~~~~ 847 (864)
=++|-.|--.|+-|+..+.+.|+.+-+..--..|.|-||-.+||.-
T Consensus 10 ~~vgd~VmaRW~Gd~~yYparI~Si~s~~~~Y~V~fKdgT~e~L~~ 55 (66)
T 2l8d_A 10 YADGEVVMGRWPGSVLYYEVQVTSYDDASHLYTVKYKDGTELALKE 55 (66)
T ss_dssp SCSSCEEEEECTTSSCEEEEEEEEEETTTTEEEEEETTSCEEEEEG
T ss_pred eecCCEEEEEcCCCccceEEEEEEeccCCceEEEEecCCCEEeech
Confidence 3678899999999999999999999866666789999988777754
No 292
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=20.25 E-value=24 Score=31.53 Aligned_cols=34 Identities=18% Similarity=0.437 Sum_probs=24.2
Q ss_pred ccccccccccccccCcccCCceeecCCCCccccccccccCcc
Q 002926 143 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQ 184 (864)
Q Consensus 143 ~dd~C~vC~~gG~~gs~~~eeLL~Cd~C~raYH~~CL~p~~~ 184 (864)
.+..|.||...-. +-+. ..|+..||..|+..+..
T Consensus 22 ~~~~C~IC~~~~~-------~p~~-~~CgH~fC~~Ci~~~~~ 55 (116)
T 1rmd_A 22 KSISCQICEHILA-------DPVE-TSCKHLFCRICILRCLK 55 (116)
T ss_dssp HHTBCTTTCSBCS-------SEEE-CTTSCEEEHHHHHHHHH
T ss_pred CCCCCCCCCcHhc-------CcEE-cCCCCcccHHHHHHHHh
Confidence 3558999986431 2222 48999999999987654
No 293
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.24 E-value=60 Score=28.05 Aligned_cols=35 Identities=20% Similarity=0.463 Sum_probs=23.1
Q ss_pred ccccccccccccCCCCCCceeccCCCCccccccCCC
Q 002926 282 GNYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGI 317 (864)
Q Consensus 282 gnyCpVC~K~Y~D~dg~~MVqCD~C~~WfH~eCd~l 317 (864)
--||.+|.+..-. -....++|..|...+|..|...
T Consensus 28 pt~C~~C~~~lwG-l~kqg~~C~~C~~~~Hk~C~~~ 62 (83)
T 2yuu_A 28 PTFCSVCKDFVWG-LNKQGYKCRQCNAAIHKKCIDK 62 (83)
T ss_dssp CCCCSSSCCCCCS-SSCCEEEETTTCCEECTTGGGT
T ss_pred CcChhhcChhhcc-ccccccccCCcCCeeChhhhhh
Confidence 3456666554311 1235688999999999999663
Done!