Query 002927
Match_columns 864
No_of_seqs 525 out of 4305
Neff 7.9
Searched_HMMs 46136
Date Thu Mar 28 13:34:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002927.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002927hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0661 AarF Predicted unusual 100.0 2.5E-55 5.3E-60 500.6 30.7 315 1-348 121-442 (517)
2 PRK04750 ubiB putative ubiquin 100.0 1.3E-52 2.8E-57 481.9 30.1 342 2-374 116-470 (537)
3 TIGR01982 UbiB 2-polyprenylphe 100.0 4.4E-49 9.5E-54 449.1 32.6 316 1-349 113-435 (437)
4 KOG1235 Predicted unusual prot 100.0 2.7E-48 5.7E-53 440.1 28.0 325 1-342 157-485 (538)
5 PRK11289 ampC beta-lactamase/D 100.0 3.3E-46 7.1E-51 418.6 29.7 241 362-646 28-269 (384)
6 PRK10662 beta-lactam binding p 100.0 2.1E-45 4.7E-50 412.3 31.9 247 360-646 26-276 (378)
7 PRK03642 putative periplasmic 100.0 1.5E-44 3.3E-49 412.4 29.7 269 364-647 38-323 (432)
8 PRK13128 D-aminopeptidase; Rev 100.0 1.3E-43 2.8E-48 408.4 29.4 323 367-841 7-335 (518)
9 PF00144 Beta-lactamase: Beta- 100.0 2.8E-43 6E-48 390.2 10.0 244 369-647 1-244 (329)
10 COG1680 AmpC Beta-lactamase cl 100.0 1.2E-36 2.6E-41 345.5 24.4 235 383-647 54-293 (390)
11 KOG1236 Predicted unusual prot 100.0 2.5E-33 5.5E-38 298.1 18.8 312 1-341 185-559 (565)
12 KOG1234 ABC (ATP binding casse 100.0 6E-33 1.3E-37 280.8 10.1 307 2-333 46-354 (363)
13 PF03109 ABC1: ABC1 family; I 99.9 6E-25 1.3E-29 205.4 7.5 111 1-124 7-119 (119)
14 cd05145 RIO1_like RIO kinase f 99.8 2.7E-20 5.9E-25 189.9 13.8 182 11-233 3-188 (190)
15 cd05147 RIO1_euk RIO kinase fa 99.8 9.7E-20 2.1E-24 185.5 14.8 183 11-233 3-188 (190)
16 smart00090 RIO RIO-like kinase 99.7 1.9E-17 4.2E-22 174.4 15.0 185 11-238 34-224 (237)
17 KOG0595 Serine/threonine-prote 99.7 5.9E-17 1.3E-21 173.6 11.7 144 11-208 16-168 (429)
18 cd05144 RIO2_C RIO kinase fami 99.7 1.9E-16 4.2E-21 162.5 15.2 170 10-221 20-195 (198)
19 cd05119 RIO RIO kinase family, 99.7 9.9E-16 2.1E-20 155.5 15.9 165 11-214 3-173 (187)
20 KOG0605 NDR and related serine 99.7 3.8E-16 8.2E-21 172.5 12.2 147 6-210 141-296 (550)
21 PRK10359 lipopolysaccharide co 99.6 8.9E-16 1.9E-20 158.9 13.0 141 11-208 37-187 (232)
22 KOG0593 Predicted protein kina 99.6 9.8E-16 2.1E-20 157.9 11.7 154 5-219 4-168 (396)
23 KOG0581 Mitogen-activated prot 99.6 8.9E-16 1.9E-20 163.3 9.4 141 11-208 85-232 (364)
24 PF01163 RIO1: RIO1 family; I 99.6 1.2E-15 2.6E-20 153.9 8.3 173 21-238 2-182 (188)
25 KOG0615 Serine/threonine prote 99.6 1.7E-15 3.7E-20 162.1 9.3 145 11-206 178-330 (475)
26 KOG4250 TANK binding protein k 99.6 1.9E-15 4.2E-20 171.6 9.1 154 5-209 13-178 (732)
27 KOG1163 Casein kinase (serine/ 99.6 4.9E-15 1.1E-19 148.3 8.5 138 11-207 21-166 (341)
28 KOG0600 Cdc2-related protein k 99.6 3.3E-15 7.2E-20 163.7 7.4 147 4-216 118-279 (560)
29 PRK09188 serine/threonine prot 99.6 1.8E-14 3.9E-19 160.0 13.2 139 10-207 23-164 (365)
30 KOG0661 MAPK related serine/th 99.6 2.1E-15 4.5E-20 164.1 5.1 154 11-219 16-176 (538)
31 PRK14879 serine/threonine prot 99.6 3.6E-14 7.8E-19 146.9 13.6 142 11-206 2-145 (211)
32 KOG0663 Protein kinase PITSLRE 99.5 3E-15 6.4E-20 156.4 4.2 151 11-219 82-244 (419)
33 TIGR03724 arch_bud32 Kae1-asso 99.5 1.6E-13 3.4E-18 140.8 15.6 139 13-208 2-142 (199)
34 KOG0667 Dual-specificity tyros 99.5 7.9E-14 1.7E-18 158.3 13.6 184 10-256 191-384 (586)
35 KOG0659 Cdk activating kinase 99.5 2.1E-14 4.5E-19 146.1 8.0 144 10-212 7-158 (318)
36 KOG0574 STE20-like serine/thre 99.5 2.2E-15 4.8E-20 154.5 0.7 147 1-210 31-184 (502)
37 KOG0594 Protein kinase PCTAIRE 99.5 5.5E-14 1.2E-18 149.6 11.3 150 5-210 13-175 (323)
38 KOG0592 3-phosphoinositide-dep 99.5 5.9E-14 1.3E-18 155.2 11.2 142 11-211 79-230 (604)
39 KOG0575 Polo-like serine/threo 99.5 1.5E-14 3.2E-19 162.4 6.4 137 11-208 24-171 (592)
40 cd05146 RIO3_euk RIO kinase fa 99.5 2.2E-13 4.7E-18 138.1 14.0 177 11-233 3-195 (197)
41 KOG0598 Ribosomal protein S6 k 99.5 6.2E-14 1.3E-18 149.4 9.2 143 5-204 24-174 (357)
42 KOG0616 cAMP-dependent protein 99.5 1.1E-13 2.3E-18 142.9 10.5 146 6-208 44-197 (355)
43 PRK12274 serine/threonine prot 99.5 4.9E-13 1.1E-17 135.8 14.5 159 10-234 7-166 (218)
44 cd05628 STKc_NDR1 Catalytic do 99.5 1.8E-13 3.9E-18 154.1 12.6 141 11-208 7-154 (363)
45 KOG0192 Tyrosine kinase specif 99.5 1.6E-13 3.4E-18 152.5 11.6 140 12-207 48-196 (362)
46 KOG0583 Serine/threonine prote 99.5 2.4E-13 5.3E-18 152.2 13.1 146 11-206 23-172 (370)
47 cd05600 STKc_Sid2p_Dbf2p Catal 99.5 2.2E-13 4.7E-18 151.4 11.8 143 11-207 7-153 (333)
48 cd05627 STKc_NDR2 Catalytic do 99.5 2.5E-13 5.5E-18 152.7 12.3 141 11-208 7-154 (360)
49 cd05571 STKc_PKB Catalytic dom 99.5 2.8E-13 6.1E-18 150.0 12.3 138 12-204 2-144 (323)
50 cd05626 STKc_LATS2 Catalytic d 99.5 2.3E-13 5.1E-18 154.2 11.6 139 11-206 7-152 (381)
51 cd05593 STKc_PKB_gamma Catalyt 99.5 2.9E-13 6.2E-18 150.3 11.6 140 11-205 1-145 (328)
52 cd05631 STKc_GRK4 Catalytic do 99.4 4.1E-13 9E-18 145.7 12.6 144 11-207 6-154 (285)
53 COG1718 RIO1 Serine/threonine 99.4 2.8E-12 6.1E-17 131.5 17.4 183 12-238 55-242 (268)
54 cd05587 STKc_cPKC Catalytic do 99.4 3.4E-13 7.3E-18 149.4 11.6 138 11-204 6-150 (324)
55 cd05085 PTKc_Fer Catalytic dom 99.4 4.3E-13 9.3E-18 142.1 11.9 140 11-206 1-144 (250)
56 cd05590 STKc_nPKC_eta Catalyti 99.4 2.5E-13 5.5E-18 150.1 10.5 139 11-205 1-146 (320)
57 PTZ00263 protein kinase A cata 99.4 4.2E-13 9E-18 149.0 11.9 143 11-207 24-170 (329)
58 cd05598 STKc_LATS Catalytic do 99.4 4.8E-13 1E-17 151.3 12.6 141 11-205 7-151 (376)
59 cd05084 PTKc_Fes Catalytic dom 99.4 6.1E-13 1.3E-17 141.2 12.7 138 11-206 1-145 (252)
60 cd05595 STKc_PKB_beta Catalyti 99.4 3.9E-13 8.5E-18 148.8 11.3 139 12-204 2-144 (323)
61 cd05591 STKc_nPKC_epsilon Cata 99.4 4E-13 8.6E-18 148.6 11.3 138 12-205 2-146 (321)
62 cd05594 STKc_PKB_alpha Catalyt 99.4 6.4E-13 1.4E-17 147.2 12.8 138 12-204 2-145 (325)
63 PLN00034 mitogen-activated pro 99.4 5.1E-13 1.1E-17 149.8 12.1 141 5-206 73-219 (353)
64 KOG0591 NIMA (never in mitosis 99.4 9.6E-14 2.1E-18 142.1 5.5 144 11-210 25-183 (375)
65 cd05612 STKc_PRKX_like Catalyt 99.4 3E-13 6.5E-18 147.4 9.8 140 11-207 7-153 (291)
66 cd05601 STKc_CRIK Catalytic do 99.4 4.9E-13 1.1E-17 148.3 11.7 141 11-207 7-154 (330)
67 KOG0608 Warts/lats-like serine 99.4 1.7E-13 3.7E-18 152.7 7.7 137 11-205 635-779 (1034)
68 cd05615 STKc_cPKC_alpha Cataly 99.4 4.2E-13 9E-18 148.6 10.7 139 11-205 6-151 (323)
69 cd05624 STKc_MRCK_beta Catalyt 99.4 7.3E-13 1.6E-17 147.2 12.4 141 11-207 7-154 (331)
70 cd05625 STKc_LATS1 Catalytic d 99.4 7.9E-13 1.7E-17 149.9 12.8 138 11-205 7-151 (382)
71 KOG4236 Serine/threonine prote 99.4 1.6E-13 3.4E-18 150.1 6.4 152 3-208 562-720 (888)
72 cd05597 STKc_DMPK_like Catalyt 99.4 7.6E-13 1.6E-17 147.1 12.0 141 11-207 7-154 (331)
73 cd05621 STKc_ROCK2 Catalytic d 99.4 7.6E-13 1.7E-17 149.4 12.2 140 11-206 49-193 (370)
74 cd05629 STKc_NDR_like_fungal C 99.4 8.6E-13 1.9E-17 149.3 12.6 140 11-207 7-153 (377)
75 cd05599 STKc_NDR_like Catalyti 99.4 6.5E-13 1.4E-17 149.5 11.5 140 11-207 7-153 (364)
76 cd05592 STKc_nPKC_theta_delta 99.4 5.7E-13 1.2E-17 147.0 10.9 77 126-205 68-146 (316)
77 cd05585 STKc_YPK1_like Catalyt 99.4 8.1E-13 1.8E-17 145.5 11.8 138 13-205 1-143 (312)
78 cd05096 PTKc_DDR1 Catalytic do 99.4 1.1E-12 2.5E-17 143.5 12.9 139 10-206 10-189 (304)
79 cd05614 STKc_MSK2_N N-terminal 99.4 6.4E-13 1.4E-17 147.6 11.0 140 11-205 6-155 (332)
80 cd05616 STKc_cPKC_beta Catalyt 99.4 8.4E-13 1.8E-17 146.1 11.9 139 11-205 6-151 (323)
81 cd05573 STKc_ROCK_NDR_like Cat 99.4 4.1E-13 8.9E-18 150.1 9.5 140 11-207 7-153 (350)
82 cd05620 STKc_nPKC_delta Cataly 99.4 5.6E-13 1.2E-17 147.1 10.4 138 11-204 1-145 (316)
83 cd05102 PTKc_VEGFR3 Catalytic 99.4 8.8E-13 1.9E-17 146.7 12.0 50 155-206 174-225 (338)
84 KOG0658 Glycogen synthase kina 99.4 2.5E-13 5.4E-18 144.5 7.1 139 10-210 29-181 (364)
85 cd05617 STKc_aPKC_zeta Catalyt 99.4 9.9E-13 2.1E-17 145.9 12.2 138 11-204 1-145 (327)
86 cd05604 STKc_SGK3 Catalytic do 99.4 1.2E-12 2.5E-17 145.1 12.4 76 126-204 68-145 (325)
87 cd05588 STKc_aPKC Catalytic do 99.4 7.8E-13 1.7E-17 146.8 11.0 140 11-204 1-145 (329)
88 cd05618 STKc_aPKC_iota Catalyt 99.4 8.3E-13 1.8E-17 146.6 11.1 140 11-204 1-145 (329)
89 cd05608 STKc_GRK1 Catalytic do 99.4 1.2E-12 2.7E-17 141.6 11.9 142 13-207 1-149 (280)
90 cd05602 STKc_SGK1 Catalytic do 99.4 1.3E-12 2.8E-17 144.7 12.3 77 126-205 68-146 (325)
91 KOG0660 Mitogen-activated prot 99.4 4.6E-13 1E-17 142.3 8.1 159 10-219 27-194 (359)
92 cd07869 STKc_PFTAIRE1 Catalyti 99.4 8.7E-13 1.9E-17 144.5 10.4 139 11-205 11-153 (303)
93 cd05584 STKc_p70S6K Catalytic 99.4 1.2E-12 2.6E-17 144.9 11.5 141 11-205 2-150 (323)
94 cd05603 STKc_SGK2 Catalytic do 99.4 1.5E-12 3.1E-17 144.0 12.1 76 126-204 68-145 (321)
95 cd05575 STKc_SGK Catalytic dom 99.4 1.4E-12 3.1E-17 144.2 12.1 77 126-205 68-146 (323)
96 cd05622 STKc_ROCK1 Catalytic d 99.4 1.5E-12 3.4E-17 147.0 12.5 141 11-207 49-194 (371)
97 cd05151 ChoK Choline Kinase (C 99.4 2.7E-12 5.8E-17 127.9 12.8 128 11-206 4-138 (170)
98 KOG0578 p21-activated serine/t 99.4 1.7E-12 3.7E-17 144.9 12.3 142 4-209 274-423 (550)
99 KOG0193 Serine/threonine prote 99.4 6.7E-13 1.5E-17 148.5 8.8 144 5-206 391-539 (678)
100 cd05596 STKc_ROCK Catalytic do 99.4 1.6E-12 3.5E-17 146.7 12.1 142 11-207 49-194 (370)
101 KOG0198 MEKK and related serin 99.4 2.3E-12 4.9E-17 139.3 12.6 79 128-207 90-170 (313)
102 cd05115 PTKc_Zap-70 Catalytic 99.4 2.4E-12 5.2E-17 137.5 12.7 139 13-206 3-146 (257)
103 cd05589 STKc_PKN Catalytic dom 99.4 1.3E-12 2.9E-17 144.6 11.0 142 11-205 5-151 (324)
104 cd07871 STKc_PCTAIRE3 Catalyti 99.4 1.1E-12 2.4E-17 142.6 10.1 137 11-206 11-154 (288)
105 cd05586 STKc_Sck1_like Catalyt 99.4 1.9E-12 4.2E-17 143.6 12.2 77 126-205 68-146 (330)
106 KOG0585 Ca2+/calmodulin-depend 99.4 2.9E-12 6.3E-17 139.7 12.2 154 11-207 103-262 (576)
107 cd05623 STKc_MRCK_alpha Cataly 99.4 2.4E-12 5.3E-17 143.0 12.1 140 11-206 7-153 (332)
108 KOG0610 Putative serine/threon 99.4 2.1E-12 4.5E-17 139.0 10.5 139 11-205 83-229 (459)
109 PTZ00426 cAMP-dependent protei 99.4 2.5E-12 5.4E-17 143.5 11.7 143 11-207 36-183 (340)
110 cd05605 STKc_GRK4_like Catalyt 99.4 4E-12 8.7E-17 138.0 12.5 143 11-206 6-153 (285)
111 cd06649 PKc_MEK2 Catalytic dom 99.4 4.3E-12 9.3E-17 141.0 12.9 141 11-207 11-156 (331)
112 cd05632 STKc_GRK5 Catalytic do 99.4 4.9E-12 1.1E-16 137.3 13.0 143 11-206 6-153 (285)
113 KOG0577 Serine/threonine prote 99.3 5.2E-13 1.1E-17 148.0 5.0 178 2-237 25-213 (948)
114 KOG0032 Ca2+/calmodulin-depend 99.3 3.5E-12 7.6E-17 142.9 11.8 145 11-207 41-191 (382)
115 cd05607 STKc_GRK7 Catalytic do 99.3 5.7E-12 1.2E-16 136.2 12.9 141 13-207 1-147 (277)
116 cd05619 STKc_nPKC_theta Cataly 99.3 3.1E-12 6.8E-17 141.2 10.9 140 11-204 1-145 (316)
117 cd07872 STKc_PCTAIRE2 Catalyti 99.3 2.8E-12 6.1E-17 140.8 10.5 139 11-205 12-154 (309)
118 KOG1187 Serine/threonine prote 99.3 1.8E-12 3.8E-17 144.9 8.8 143 6-207 75-229 (361)
119 KOG0597 Serine-threonine prote 99.3 1.6E-12 3.4E-17 143.9 8.1 140 11-207 8-152 (808)
120 PRK13184 pknD serine/threonine 99.3 5E-12 1.1E-16 153.4 13.1 142 11-205 8-163 (932)
121 PRK09605 bifunctional UGMP fam 99.3 1.1E-11 2.5E-16 146.5 15.9 140 10-207 338-479 (535)
122 cd05104 PTKc_Kit Catalytic dom 99.3 5.2E-12 1.1E-16 142.9 12.2 51 155-207 214-266 (375)
123 cd06629 STKc_MAPKKK_Bck1_like 99.3 8.7E-12 1.9E-16 133.9 13.4 152 5-206 1-159 (272)
124 cd05582 STKc_RSK_N N-terminal 99.3 5E-12 1.1E-16 139.5 11.8 138 11-206 2-149 (318)
125 cd05633 STKc_GRK3 Catalytic do 99.3 8.3E-12 1.8E-16 135.1 13.2 78 126-206 69-148 (279)
126 PF00069 Pkinase: Protein kina 99.3 5.2E-12 1.1E-16 134.2 11.0 140 11-205 5-148 (260)
127 KOG0588 Serine/threonine prote 99.3 2.7E-12 5.9E-17 144.9 9.1 134 11-204 18-161 (786)
128 cd05108 PTKc_EGFR Catalytic do 99.3 7.4E-12 1.6E-16 138.0 12.5 139 11-207 13-161 (316)
129 COG0478 RIO-like serine/threon 99.3 1.1E-11 2.4E-16 128.2 12.5 185 6-237 93-277 (304)
130 cd05609 STKc_MAST Catalytic do 99.3 7.6E-12 1.6E-16 137.1 12.2 137 11-204 7-150 (305)
131 cd05069 PTKc_Yes Catalytic dom 99.3 9.1E-12 2E-16 133.0 12.4 139 11-206 12-153 (260)
132 cd05070 PTKc_Fyn_Yrk Catalytic 99.3 7.9E-12 1.7E-16 133.4 11.6 140 11-207 12-154 (260)
133 COG3642 Mn2+-dependent serine/ 99.3 4.2E-11 9E-16 117.5 15.4 137 11-204 2-140 (204)
134 cd05068 PTKc_Frk_like Catalyti 99.3 8.1E-12 1.7E-16 133.4 11.7 139 11-206 12-154 (261)
135 cd05109 PTKc_HER2 Catalytic do 99.3 8E-12 1.7E-16 134.9 11.6 139 11-207 13-161 (279)
136 cd05570 STKc_PKC Catalytic dom 99.3 5.5E-12 1.2E-16 139.3 10.5 137 12-204 2-145 (318)
137 cd06650 PKc_MEK1 Catalytic dom 99.3 1.2E-11 2.5E-16 137.7 13.2 140 11-206 11-155 (333)
138 cd05064 PTKc_EphR_A10 Catalyti 99.3 9.5E-12 2.1E-16 133.5 12.0 140 11-205 11-157 (266)
139 cd07848 STKc_CDKL5 Catalytic d 99.3 4.5E-12 9.8E-17 137.3 9.4 142 11-207 7-152 (287)
140 KOG0611 Predicted serine/threo 99.3 2.7E-12 5.8E-17 136.8 7.3 140 11-206 59-204 (668)
141 cd05033 PTKc_EphR Catalytic do 99.3 1.3E-11 2.9E-16 132.1 12.6 142 10-206 9-157 (266)
142 cd05610 STKc_MASTL Catalytic d 99.3 8.6E-12 1.9E-16 151.2 12.4 142 11-206 10-155 (669)
143 cd05079 PTKc_Jak1_rpt2 Catalyt 99.3 1.3E-11 2.8E-16 133.7 12.6 141 11-206 10-160 (284)
144 KOG0694 Serine/threonine prote 99.3 5E-12 1.1E-16 143.9 9.6 140 11-205 374-518 (694)
145 cd06641 STKc_MST3 Catalytic do 99.3 1.3E-11 2.9E-16 133.1 12.5 146 2-207 3-153 (277)
146 cd05114 PTKc_Tec_Rlk Catalytic 99.3 1.1E-11 2.4E-16 131.9 11.5 138 11-206 10-151 (256)
147 cd05059 PTKc_Tec_like Catalyti 99.3 7.3E-12 1.6E-16 133.4 10.2 136 11-206 10-151 (256)
148 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.3 1.4E-11 3E-16 133.4 12.4 138 11-207 10-160 (284)
149 PTZ00267 NIMA-related protein 99.3 1.1E-11 2.4E-16 144.7 12.5 138 11-207 73-221 (478)
150 cd05112 PTKc_Itk Catalytic dom 99.3 8.2E-12 1.8E-16 132.7 10.3 136 11-206 10-151 (256)
151 cd05063 PTKc_EphR_A2 Catalytic 99.3 1.5E-11 3.2E-16 131.8 12.3 142 10-207 10-159 (268)
152 cd05067 PTKc_Lck_Blk Catalytic 99.3 1.4E-11 3.1E-16 131.4 12.1 139 11-206 12-153 (260)
153 cd05041 PTKc_Fes_like Catalyti 99.3 2E-11 4.3E-16 129.3 13.0 138 11-206 1-144 (251)
154 cd06644 STKc_STK10_LOK Catalyt 99.3 1.8E-11 3.8E-16 133.2 12.8 139 11-205 18-160 (292)
155 cd05113 PTKc_Btk_Bmx Catalytic 99.3 1E-11 2.2E-16 132.5 10.7 136 11-206 10-151 (256)
156 cd05071 PTKc_Src Catalytic dom 99.3 1.5E-11 3.2E-16 131.7 12.0 140 11-207 12-154 (262)
157 cd05630 STKc_GRK6 Catalytic do 99.3 1.5E-11 3.2E-16 133.6 12.1 143 11-206 6-153 (285)
158 cd06640 STKc_MST4 Catalytic do 99.3 1.1E-11 2.4E-16 133.8 11.0 143 3-207 4-153 (277)
159 KOG0580 Serine/threonine prote 99.3 1.4E-12 3E-17 131.2 3.4 157 6-217 22-186 (281)
160 cd07878 STKc_p38beta_MAPK11 Ca 99.3 1.1E-11 2.4E-16 138.3 10.9 76 127-207 93-170 (343)
161 cd06642 STKc_STK25-YSK1 Cataly 99.3 6.5E-12 1.4E-16 135.5 8.8 143 3-207 4-153 (277)
162 cd07876 STKc_JNK2 Catalytic do 99.3 2.1E-11 4.6E-16 137.0 13.2 137 11-205 27-173 (359)
163 cd00192 PTKc Catalytic domain 99.3 2.1E-11 4.6E-16 129.3 12.5 140 11-208 1-158 (262)
164 KOG0201 Serine/threonine prote 99.3 1.9E-12 4.1E-17 140.3 4.2 149 3-211 13-167 (467)
165 KOG0197 Tyrosine kinases [Sign 99.3 6.6E-12 1.4E-16 139.9 8.6 138 11-208 212-356 (468)
166 cd05606 STKc_beta_ARK Catalyti 99.3 2.4E-11 5.2E-16 131.4 12.8 79 126-207 69-149 (278)
167 cd06646 STKc_MAP4K5 Catalytic 99.3 1.8E-11 3.8E-16 131.2 11.5 138 11-206 15-157 (267)
168 PTZ00283 serine/threonine prot 99.3 1.6E-11 3.5E-16 143.8 12.2 76 129-206 114-194 (496)
169 cd07859 STKc_TDY_MAPK_plant Ca 99.3 1.4E-11 3E-16 136.9 11.1 138 11-205 6-153 (338)
170 cd05103 PTKc_VEGFR2 Catalytic 99.3 1.6E-11 3.4E-16 137.2 11.6 39 166-206 192-230 (343)
171 cd06631 STKc_YSK4 Catalytic do 99.3 2.6E-11 5.5E-16 129.7 12.6 141 11-205 6-152 (265)
172 cd05105 PTKc_PDGFR_alpha Catal 99.3 2.4E-11 5.2E-16 138.5 13.1 39 166-206 250-288 (400)
173 cd05066 PTKc_EphR_A Catalytic 99.3 2.4E-11 5.3E-16 130.2 12.5 142 11-207 10-158 (267)
174 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.3 1.7E-11 3.8E-16 131.5 11.3 136 12-205 2-150 (269)
175 cd06635 STKc_TAO1 Catalytic do 99.3 2.6E-11 5.6E-16 133.8 12.9 143 11-207 31-177 (317)
176 cd05040 PTKc_Ack_like Catalyti 99.3 2.2E-11 4.7E-16 129.6 11.8 142 11-207 1-149 (257)
177 cd05034 PTKc_Src_like Catalyti 99.3 1.9E-11 4.1E-16 130.4 11.3 137 11-207 12-155 (261)
178 cd07873 STKc_PCTAIRE1 Catalyti 99.3 1.3E-11 2.8E-16 135.0 10.2 140 11-206 12-155 (301)
179 cd07862 STKc_CDK6 Catalytic do 99.3 1E-11 2.3E-16 134.7 9.4 77 127-206 82-161 (290)
180 cd05580 STKc_PKA Catalytic dom 99.3 2.7E-11 5.9E-16 131.7 12.6 144 11-208 7-154 (290)
181 cd05072 PTKc_Lyn Catalytic dom 99.3 3.4E-11 7.3E-16 128.5 12.8 137 11-207 12-155 (261)
182 cd05057 PTKc_EGFR_like Catalyt 99.3 3.6E-11 7.7E-16 129.8 13.0 142 11-207 13-161 (279)
183 smart00219 TyrKc Tyrosine kina 99.3 2.9E-11 6.4E-16 128.2 12.1 140 11-208 5-156 (258)
184 cd06625 STKc_MEKK3_like Cataly 99.3 3.4E-11 7.5E-16 128.4 12.6 144 10-206 7-155 (263)
185 KOG1165 Casein kinase (serine/ 99.3 1.4E-11 2.9E-16 129.1 9.0 139 11-208 34-182 (449)
186 KOG0582 Ste20-like serine/thre 99.3 3.3E-11 7.2E-16 130.8 12.2 141 11-207 32-178 (516)
187 cd05122 PKc_STE Catalytic doma 99.3 3.8E-11 8.3E-16 126.3 12.6 140 11-209 6-152 (253)
188 cd05088 PTKc_Tie2 Catalytic do 99.3 2.9E-11 6.3E-16 132.5 11.9 77 126-204 80-173 (303)
189 cd07874 STKc_JNK3 Catalytic do 99.2 3.4E-11 7.4E-16 135.1 12.7 138 11-206 23-170 (355)
190 cd05611 STKc_Rim15_like Cataly 99.2 3.8E-11 8.3E-16 128.0 12.4 77 126-205 69-147 (260)
191 cd05083 PTKc_Chk Catalytic dom 99.2 3.2E-11 7E-16 128.2 11.7 136 11-205 12-150 (254)
192 PHA03211 serine/threonine kina 99.2 2.2E-11 4.8E-16 140.8 11.2 133 11-206 175-311 (461)
193 PRK10345 hypothetical protein; 99.2 6.6E-11 1.4E-15 122.1 13.4 139 10-205 7-159 (210)
194 cd06605 PKc_MAPKK Catalytic do 99.2 2.3E-11 4.9E-16 129.9 10.4 143 11-208 7-154 (265)
195 cd05097 PTKc_DDR_like Catalyti 99.2 3.1E-11 6.7E-16 131.6 11.7 138 11-206 11-180 (295)
196 cd05065 PTKc_EphR_B Catalytic 99.2 4E-11 8.8E-16 128.6 12.3 142 10-206 9-157 (269)
197 KOG1989 ARK protein kinase fam 99.2 2.8E-11 6E-16 141.9 11.7 125 129-255 117-253 (738)
198 cd05082 PTKc_Csk Catalytic dom 99.2 4.1E-11 8.8E-16 127.6 12.3 137 11-206 12-153 (256)
199 cd05106 PTKc_CSF-1R Catalytic 99.2 3.2E-11 6.8E-16 136.5 12.0 50 155-206 212-263 (374)
200 cd05073 PTKc_Hck Catalytic dom 99.2 4.7E-11 1E-15 127.5 12.8 140 11-207 12-154 (260)
201 cd05061 PTKc_InsR Catalytic do 99.2 3E-11 6.5E-16 131.2 11.4 138 11-206 12-170 (288)
202 cd05581 STKc_PDK1 Catalytic do 99.2 1.5E-11 3.2E-16 132.2 8.8 143 11-209 7-156 (280)
203 cd08529 STKc_FA2-like Catalyti 99.2 4.2E-11 9.2E-16 127.0 12.2 140 11-207 6-153 (256)
204 cd05090 PTKc_Ror1 Catalytic do 99.2 4.6E-11 1E-15 129.2 12.7 138 11-206 11-175 (283)
205 cd06611 STKc_SLK_like Catalyti 99.2 4.3E-11 9.3E-16 129.2 12.4 140 11-206 11-154 (280)
206 cd06917 STKc_NAK1_like Catalyt 99.2 4.2E-11 9.1E-16 129.0 12.2 143 11-208 7-154 (277)
207 PHA03209 serine/threonine kina 99.2 2.1E-11 4.5E-16 137.1 10.2 128 11-204 72-206 (357)
208 cd07863 STKc_CDK4 Catalytic do 99.2 2.4E-11 5.2E-16 131.6 10.1 143 11-206 6-159 (288)
209 cd00180 PKc Catalytic domain o 99.2 4.8E-11 1E-15 121.1 11.7 140 13-209 1-147 (215)
210 cd07847 STKc_CDKL1_4 Catalytic 99.2 2.3E-11 5E-16 131.4 9.9 142 11-207 7-152 (286)
211 cd05037 PTK_Jak_rpt1 Pseudokin 99.2 3.8E-11 8.3E-16 127.6 11.3 81 127-207 73-160 (259)
212 PF06176 WaaY: Lipopolysacchar 99.2 1.5E-10 3.3E-15 117.9 14.8 70 126-205 115-184 (229)
213 cd05116 PTKc_Syk Catalytic dom 99.2 5.4E-11 1.2E-15 126.8 12.3 138 12-207 2-147 (257)
214 cd07875 STKc_JNK1 Catalytic do 99.2 5.2E-11 1.1E-15 134.1 12.8 73 128-206 103-177 (364)
215 PTZ00036 glycogen synthase kin 99.2 3.6E-11 7.8E-16 138.9 11.8 76 129-206 142-222 (440)
216 PHA03212 serine/threonine kina 99.2 3.2E-11 6.9E-16 137.2 11.1 131 11-205 98-232 (391)
217 cd05049 PTKc_Trk Catalytic dom 99.2 4.4E-11 9.4E-16 128.9 11.6 140 11-205 11-172 (280)
218 cd05577 STKc_GRK Catalytic dom 99.2 4.3E-11 9.3E-16 129.1 11.5 141 13-206 1-146 (277)
219 cd08224 STKc_Nek6_Nek7 Catalyt 99.2 4.8E-11 1E-15 127.5 11.8 143 11-207 8-158 (267)
220 cd05054 PTKc_VEGFR Catalytic d 99.2 3.3E-11 7.2E-16 134.3 10.8 53 153-207 171-225 (337)
221 cd07853 STKc_NLK Catalytic dom 99.2 2.8E-11 6.1E-16 136.7 10.3 140 11-206 6-154 (372)
222 cd05076 PTK_Tyk2_rpt1 Pseudoki 99.2 3.2E-11 7E-16 130.1 10.3 80 126-205 88-174 (274)
223 cd05042 PTKc_Aatyk Catalytic d 99.2 5.9E-11 1.3E-15 127.3 12.3 78 126-205 67-150 (269)
224 cd06657 STKc_PAK4 Catalytic do 99.2 2.9E-11 6.3E-16 131.9 10.0 139 11-207 26-168 (292)
225 cd07844 STKc_PCTAIRE_like Cata 99.2 3.1E-11 6.7E-16 131.1 10.2 138 11-205 11-153 (291)
226 cd06645 STKc_MAP4K3 Catalytic 99.2 5.3E-11 1.2E-15 127.4 11.7 138 11-206 15-157 (267)
227 cd06619 PKc_MKK5 Catalytic dom 99.2 7.7E-11 1.7E-15 127.4 13.0 136 11-207 7-147 (279)
228 cd06643 STKc_SLK Catalytic dom 99.2 9.6E-11 2.1E-15 126.7 13.7 139 11-206 11-154 (282)
229 cd05048 PTKc_Ror Catalytic Dom 99.2 6.9E-11 1.5E-15 127.7 12.5 138 11-206 11-175 (283)
230 cd05052 PTKc_Abl Catalytic dom 99.2 6.8E-11 1.5E-15 126.5 12.3 140 11-207 12-156 (263)
231 cd06627 STKc_Cdc7_like Catalyt 99.2 7E-11 1.5E-15 125.0 12.3 144 10-209 5-153 (254)
232 cd08223 STKc_Nek4 Catalytic do 99.2 6.6E-11 1.4E-15 125.7 12.1 141 11-206 6-153 (257)
233 cd05056 PTKc_FAK Catalytic dom 99.2 6.7E-11 1.4E-15 127.0 12.3 143 10-207 11-159 (270)
234 cd05613 STKc_MSK1_N N-terminal 99.2 5.1E-11 1.1E-15 129.4 11.4 142 11-207 6-157 (290)
235 cd08219 STKc_Nek3 Catalytic do 99.2 8.8E-11 1.9E-15 124.8 13.0 141 11-207 6-152 (255)
236 cd05579 STKc_MAST_like Catalyt 99.2 3.9E-11 8.4E-16 127.6 10.3 77 126-205 65-143 (265)
237 cd06656 STKc_PAK3 Catalytic do 99.2 5E-11 1.1E-15 130.2 11.3 137 11-208 25-168 (297)
238 cd05101 PTKc_FGFR2 Catalytic d 99.2 6.8E-11 1.5E-15 129.5 12.3 143 10-207 20-189 (304)
239 cd06624 STKc_ASK Catalytic dom 99.2 1E-10 2.2E-15 125.5 13.4 138 11-206 14-160 (268)
240 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.2 7.5E-11 1.6E-15 127.6 12.4 137 11-207 10-159 (283)
241 cd06615 PKc_MEK Catalytic doma 99.2 7.8E-11 1.7E-15 129.5 12.7 140 11-206 7-151 (308)
242 cd05089 PTKc_Tie1 Catalytic do 99.2 6.7E-11 1.4E-15 129.1 12.1 138 10-204 7-168 (297)
243 PTZ00284 protein kinase; Provi 99.2 4E-11 8.6E-16 139.8 10.9 142 11-204 135-297 (467)
244 PRK01723 3-deoxy-D-manno-octul 99.2 1.2E-10 2.6E-15 123.1 13.5 146 11-206 37-193 (239)
245 cd06638 STKc_myosinIIIA Cataly 99.2 7.9E-11 1.7E-15 127.4 12.4 138 11-207 24-176 (286)
246 cd07836 STKc_Pho85 Catalytic d 99.2 5E-11 1.1E-15 128.8 10.6 137 11-206 6-151 (284)
247 cd05095 PTKc_DDR2 Catalytic do 99.2 5.5E-11 1.2E-15 129.7 11.0 79 126-206 91-181 (296)
248 cd05060 PTKc_Syk_like Catalyti 99.2 1.1E-10 2.5E-15 124.2 13.2 138 12-206 2-146 (257)
249 PLN03225 Serine/threonine-prot 99.2 6.7E-11 1.5E-15 140.2 12.5 80 126-206 207-307 (566)
250 cd05039 PTKc_Csk_like Catalyti 99.2 1.1E-10 2.3E-15 124.3 12.9 138 10-206 11-153 (256)
251 cd06628 STKc_MAPKKK_Byr2_like 99.2 1.1E-10 2.4E-15 124.9 13.0 145 11-206 6-157 (267)
252 cd08228 STKc_Nek6 Catalytic do 99.2 6.9E-11 1.5E-15 126.5 11.5 142 10-207 7-158 (267)
253 cd07868 STKc_CDK8 Catalytic do 99.2 6.3E-11 1.4E-15 130.5 11.5 144 5-207 2-164 (317)
254 cd05062 PTKc_IGF-1R Catalytic 99.2 8.8E-11 1.9E-15 126.6 12.3 138 11-206 12-170 (277)
255 cd05098 PTKc_FGFR1 Catalytic d 99.2 7.3E-11 1.6E-15 129.5 11.9 141 11-206 24-191 (307)
256 cd06639 STKc_myosinIIIB Cataly 99.2 1E-10 2.2E-15 127.1 12.9 140 11-207 28-180 (291)
257 cd05574 STKc_phototropin_like 99.2 6.2E-11 1.3E-15 130.5 11.3 141 11-207 7-155 (316)
258 cd05036 PTKc_ALK_LTK Catalytic 99.2 6.5E-11 1.4E-15 127.7 11.2 140 11-206 12-170 (277)
259 cd08229 STKc_Nek7 Catalytic do 99.2 7.5E-11 1.6E-15 126.2 11.6 140 11-206 8-157 (267)
260 cd05075 PTKc_Axl Catalytic dom 99.2 1E-10 2.2E-15 125.5 12.7 143 11-207 5-164 (272)
261 cd07861 STKc_CDK1_euk Catalyti 99.2 4.7E-11 1E-15 129.0 10.0 138 11-206 6-152 (285)
262 cd05038 PTKc_Jak_rpt2 Catalyti 99.2 9.7E-11 2.1E-15 126.3 12.5 138 11-206 10-160 (284)
263 cd05047 PTKc_Tie Catalytic dom 99.2 1.2E-10 2.7E-15 125.1 13.0 137 11-204 1-161 (270)
264 cd07832 STKc_CCRK Catalytic do 99.2 6.7E-11 1.4E-15 127.8 11.0 142 11-207 6-151 (286)
265 cd05111 PTK_HER3 Pseudokinase 99.2 1.2E-10 2.5E-15 126.1 12.8 80 126-207 80-161 (279)
266 cd07839 STKc_CDK5 Catalytic do 99.2 3.1E-11 6.8E-16 130.4 8.3 138 11-206 6-150 (284)
267 cd06613 STKc_MAP4K3_like Catal 99.2 1.1E-10 2.4E-15 124.2 12.4 141 11-207 9-153 (262)
268 cd07870 STKc_PFTAIRE2 Catalyti 99.2 6.8E-11 1.5E-15 128.5 10.9 139 10-205 10-153 (291)
269 cd06612 STKc_MST1_2 Catalytic 99.2 1.3E-10 2.8E-15 123.4 12.7 140 11-208 9-152 (256)
270 cd05077 PTK_Jak1_rpt1 Pseudoki 99.2 8.9E-11 1.9E-15 125.8 11.5 80 126-205 76-162 (262)
271 cd05035 PTKc_Axl_like Catalyti 99.2 1.2E-10 2.7E-15 124.7 12.5 76 129-206 82-164 (273)
272 cd05110 PTKc_HER4 Catalytic do 99.2 9.3E-11 2E-15 128.5 11.8 141 11-207 13-161 (303)
273 cd06617 PKc_MKK3_6 Catalytic d 99.2 8.8E-11 1.9E-15 126.8 11.4 141 11-207 7-156 (283)
274 cd06607 STKc_TAO Catalytic dom 99.2 1.1E-10 2.4E-15 128.0 12.4 142 11-207 21-167 (307)
275 cd06636 STKc_MAP4K4_6 Catalyti 99.2 1.3E-10 2.8E-15 125.6 12.7 137 11-206 22-172 (282)
276 cd06623 PKc_MAPKK_plant_like C 99.2 1.3E-10 2.7E-15 123.9 12.3 141 11-207 7-152 (264)
277 PHA02988 hypothetical protein; 99.2 1.2E-10 2.5E-15 126.6 12.1 140 10-207 25-175 (283)
278 cd07841 STKc_CDK7 Catalytic do 99.2 6.6E-11 1.4E-15 129.0 10.2 145 11-207 6-154 (298)
279 cd05572 STKc_cGK_PKG Catalytic 99.2 1.4E-10 3E-15 123.9 12.4 141 13-208 1-146 (262)
280 cd05583 STKc_MSK_N N-terminal 99.2 7.1E-11 1.5E-15 128.1 10.4 142 11-207 6-157 (288)
281 KOG0587 Traf2- and Nck-interac 99.2 6.3E-11 1.4E-15 137.8 10.2 142 11-211 25-179 (953)
282 cd06658 STKc_PAK5 Catalytic do 99.2 4.5E-11 9.7E-16 130.3 8.7 77 126-206 91-169 (292)
283 cd07845 STKc_CDK10 Catalytic d 99.2 6E-11 1.3E-15 130.2 9.8 142 11-207 13-160 (309)
284 cd06637 STKc_TNIK Catalytic do 99.2 1E-10 2.2E-15 125.5 11.3 140 11-207 12-163 (272)
285 KOG0662 Cyclin-dependent kinas 99.2 9.6E-12 2.1E-16 119.5 2.9 143 11-210 8-156 (292)
286 cd06608 STKc_myosinIII_like Ca 99.2 1.4E-10 3E-15 124.3 12.1 138 11-207 12-165 (275)
287 cd06632 STKc_MEKK1_plant Catal 99.2 9.3E-11 2E-15 124.5 10.7 146 10-207 5-154 (258)
288 cd05578 STKc_Yank1 Catalytic d 99.2 5.2E-11 1.1E-15 126.8 8.7 141 11-208 6-153 (258)
289 cd07867 STKc_CDC2L6 Catalytic 99.2 1.2E-10 2.7E-15 128.0 12.0 141 9-207 5-164 (317)
290 KOG4721 Serine/threonine prote 99.2 4.1E-11 8.9E-16 132.7 7.8 139 4-208 122-265 (904)
291 cd05107 PTKc_PDGFR_beta Cataly 99.2 1.6E-10 3.5E-15 131.8 13.0 38 166-205 252-289 (401)
292 PHA03207 serine/threonine kina 99.2 7.3E-11 1.6E-15 134.4 10.3 134 11-207 98-237 (392)
293 cd06610 STKc_OSR1_SPAK Catalyt 99.2 1.7E-10 3.6E-15 123.2 12.4 140 11-208 7-155 (267)
294 cd06630 STKc_MEKK1 Catalytic d 99.2 1.2E-10 2.7E-15 124.4 11.3 147 11-207 6-156 (268)
295 cd07837 STKc_CdkB_plant Cataly 99.2 1.3E-10 2.8E-15 126.4 11.6 143 11-206 7-162 (295)
296 KOG0589 Serine/threonine prote 99.2 1.9E-11 4E-16 135.8 4.8 145 11-209 10-160 (426)
297 cd07833 STKc_CDKL Catalytic do 99.2 7.5E-11 1.6E-15 127.5 9.5 143 11-208 7-153 (288)
298 cd05120 APH_ChoK_like Aminogly 99.2 2E-10 4.3E-15 110.9 11.5 132 10-207 3-141 (155)
299 cd05148 PTKc_Srm_Brk Catalytic 99.2 1.1E-10 2.4E-15 124.4 10.6 138 11-207 12-156 (261)
300 cd05091 PTKc_Ror2 Catalytic do 99.2 1.5E-10 3.1E-15 125.3 11.6 80 126-207 80-176 (283)
301 cd05055 PTKc_PDGFR Catalytic d 99.2 1.8E-10 3.9E-15 126.2 12.5 142 10-206 40-192 (302)
302 cd06622 PKc_MAPKK_PBS2_like Ca 99.2 9.7E-11 2.1E-15 126.8 10.2 138 11-206 7-154 (286)
303 cd06626 STKc_MEKK4 Catalytic d 99.2 9.4E-11 2E-15 125.0 9.9 140 11-208 6-152 (264)
304 cd06633 STKc_TAO3 Catalytic do 99.2 1.6E-10 3.5E-15 127.3 11.9 147 3-205 21-171 (313)
305 cd06659 STKc_PAK6 Catalytic do 99.2 7.5E-11 1.6E-15 128.9 9.1 78 126-207 90-169 (297)
306 cd05099 PTKc_FGFR4 Catalytic d 99.1 2.1E-10 4.5E-15 126.4 12.5 80 126-207 90-186 (314)
307 cd05051 PTKc_DDR Catalytic dom 99.1 2.5E-10 5.5E-15 124.1 13.0 79 126-206 91-181 (296)
308 cd07880 STKc_p38gamma_MAPK12 C 99.1 1.8E-10 4E-15 128.6 12.2 139 11-206 21-169 (343)
309 cd06614 STKc_PAK Catalytic dom 99.1 2.6E-10 5.5E-15 123.6 12.8 140 11-207 25-168 (286)
310 cd08221 STKc_Nek9 Catalytic do 99.1 2.2E-10 4.7E-15 121.8 11.9 142 11-207 6-153 (256)
311 cd06655 STKc_PAK2 Catalytic do 99.1 1.7E-10 3.7E-15 126.0 11.4 139 11-208 25-168 (296)
312 cd07843 STKc_CDC2L1 Catalytic 99.1 1.5E-10 3.3E-15 125.8 10.9 141 11-207 11-158 (293)
313 KOG0612 Rho-associated, coiled 99.1 2.4E-11 5.2E-16 144.4 4.7 76 127-206 148-226 (1317)
314 PF07714 Pkinase_Tyr: Protein 99.1 2E-10 4.3E-15 122.9 11.5 140 11-205 5-153 (259)
315 cd06654 STKc_PAK1 Catalytic do 99.1 1.5E-10 3.3E-15 126.4 10.8 138 11-207 26-168 (296)
316 cd06621 PKc_MAPKK_Pek1_like Ca 99.1 2.6E-10 5.7E-15 123.7 12.6 140 11-206 7-156 (287)
317 cd06606 STKc_MAPKKK Catalytic 99.1 2.5E-10 5.4E-15 120.7 12.1 141 10-208 5-154 (260)
318 cd06620 PKc_MAPKK_Byr1_like Ca 99.1 1.5E-10 3.1E-15 125.5 10.5 137 11-206 11-155 (284)
319 cd07850 STKc_JNK Catalytic dom 99.1 1.9E-10 4.1E-15 128.9 11.7 139 11-207 22-170 (353)
320 cd06652 STKc_MEKK2 Catalytic d 99.1 2.5E-10 5.4E-15 122.2 12.0 140 11-206 8-157 (265)
321 cd07846 STKc_CDKL2_3 Catalytic 99.1 8.3E-11 1.8E-15 127.2 8.4 139 11-207 7-152 (286)
322 cd05053 PTKc_FGFR Catalytic do 99.1 2.2E-10 4.9E-15 124.4 11.8 142 11-207 18-184 (293)
323 cd06609 STKc_MST3_like Catalyt 99.1 2.3E-10 5.1E-15 123.0 11.8 140 11-208 7-151 (274)
324 cd06653 STKc_MEKK3_like_1 Cata 99.1 2.1E-10 4.6E-15 122.7 11.3 143 11-206 8-157 (264)
325 PLN03224 probable serine/threo 99.1 2.8E-10 6.1E-15 132.0 13.1 77 127-205 258-359 (507)
326 cd08217 STKc_Nek2 Catalytic do 99.1 2E-10 4.4E-15 122.1 11.0 140 11-207 6-162 (265)
327 KOG1166 Mitotic checkpoint ser 99.1 1.1E-10 2.5E-15 140.9 10.1 141 11-205 704-851 (974)
328 cd05050 PTKc_Musk Catalytic do 99.1 2.5E-10 5.5E-15 123.8 12.0 139 11-205 11-180 (288)
329 KOG1095 Protein tyrosine kinas 99.1 9.1E-11 2E-15 141.8 9.0 138 11-206 698-853 (1025)
330 KOG1164 Casein kinase (serine/ 99.1 1.7E-10 3.6E-15 127.9 10.4 140 10-203 23-175 (322)
331 cd07840 STKc_CDK9_like Catalyt 99.1 1.7E-10 3.7E-15 124.5 10.2 143 11-208 5-153 (287)
332 cd05058 PTKc_Met_Ron Catalytic 99.1 2.8E-10 6E-15 121.4 11.7 80 126-207 69-150 (262)
333 cd07864 STKc_CDK12 Catalytic d 99.1 1.2E-10 2.6E-15 127.1 9.1 142 11-207 13-168 (302)
334 PTZ00024 cyclin-dependent prot 99.1 1.4E-10 3E-15 129.0 9.7 152 11-206 15-170 (335)
335 cd08227 PK_STRAD_alpha Pseudok 99.1 3.6E-10 7.8E-15 125.3 12.8 140 11-205 4-151 (327)
336 cd05086 PTKc_Aatyk2 Catalytic 99.1 3.6E-10 7.8E-15 121.4 12.3 77 126-204 67-148 (268)
337 cd05032 PTKc_InsR_like Catalyt 99.1 2.6E-10 5.7E-15 122.7 11.3 138 11-206 12-170 (277)
338 cd06648 STKc_PAK_II Catalytic 99.1 4.2E-10 9E-15 122.2 12.7 137 11-206 25-166 (285)
339 KOG0194 Protein tyrosine kinas 99.1 1.7E-10 3.8E-15 130.5 9.8 140 11-206 163-313 (474)
340 cd08215 STKc_Nek Catalytic dom 99.1 3.5E-10 7.6E-15 119.6 11.8 142 11-207 6-155 (258)
341 KOG1094 Discoidin domain recep 99.1 8.1E-11 1.8E-15 131.0 6.9 139 11-207 544-689 (807)
342 cd06651 STKc_MEKK3 Catalytic d 99.1 3.4E-10 7.4E-15 121.3 11.6 144 10-206 7-157 (266)
343 cd05123 STKc_AGC Catalytic dom 99.1 2.6E-10 5.7E-15 120.5 10.6 79 126-207 65-145 (250)
344 cd05045 PTKc_RET Catalytic dom 99.1 3.9E-10 8.5E-15 122.5 12.2 138 11-206 6-178 (290)
345 PHA03390 pk1 serine/threonine- 99.1 3.7E-10 8E-15 121.4 11.7 79 126-207 81-162 (267)
346 cd07860 STKc_CDK2_3 Catalytic 99.1 1.5E-10 3.2E-15 125.2 8.6 141 11-206 6-151 (284)
347 cd08220 STKc_Nek8 Catalytic do 99.1 3.2E-10 6.9E-15 120.3 11.0 143 11-207 6-154 (256)
348 cd07865 STKc_CDK9 Catalytic do 99.1 2.3E-10 4.9E-15 125.2 10.1 142 11-207 18-171 (310)
349 PLN00009 cyclin-dependent kina 99.1 3.4E-10 7.3E-15 123.2 11.4 138 11-205 8-153 (294)
350 cd05100 PTKc_FGFR3 Catalytic d 99.1 4.9E-10 1.1E-14 124.6 12.9 79 126-206 90-185 (334)
351 cd05576 STKc_RPK118_like Catal 99.1 2.5E-10 5.4E-15 120.4 9.8 78 126-206 57-136 (237)
352 cd05046 PTK_CCK4 Pseudokinase 99.1 5E-10 1.1E-14 120.4 12.2 137 11-205 11-167 (275)
353 cd06634 STKc_TAO2 Catalytic do 99.1 4.4E-10 9.6E-15 123.4 11.7 143 11-207 21-167 (308)
354 cd05078 PTK_Jak2_Jak3_rpt1 Pse 99.1 2.1E-10 4.7E-15 122.3 8.7 81 126-206 71-159 (258)
355 PTZ00266 NIMA-related protein 99.1 4.8E-10 1E-14 137.0 12.6 143 11-206 19-193 (1021)
356 KOG0983 Mitogen-activated prot 99.1 1.7E-10 3.8E-15 117.9 7.3 80 126-209 163-246 (391)
357 cd07831 STKc_MOK Catalytic dom 99.1 4.1E-10 8.9E-15 121.4 10.8 139 11-206 5-150 (282)
358 cd05093 PTKc_TrkB Catalytic do 99.1 6.6E-10 1.4E-14 120.7 12.5 79 126-206 79-171 (288)
359 cd07879 STKc_p38delta_MAPK13 C 99.1 4.8E-10 1E-14 125.2 11.7 145 4-206 13-168 (342)
360 cd05094 PTKc_TrkC Catalytic do 99.1 5.3E-10 1.2E-14 121.6 11.6 137 11-206 11-174 (291)
361 cd07830 STKc_MAK_like Catalyti 99.1 2.8E-10 6E-15 122.9 9.3 79 126-207 70-151 (283)
362 cd07877 STKc_p38alpha_MAPK14 C 99.1 5.9E-10 1.3E-14 124.6 12.1 139 11-206 23-171 (345)
363 cd07835 STKc_CDK1_like Catalyt 99.1 3.3E-10 7.1E-15 122.4 9.7 141 11-206 5-150 (283)
364 smart00221 STYKc Protein kinas 99.1 6.8E-10 1.5E-14 114.8 11.7 140 11-208 5-151 (225)
365 cd05044 PTKc_c-ros Catalytic d 99.1 3.4E-10 7.4E-15 121.2 9.6 81 126-206 71-162 (269)
366 KOG0199 ACK and related non-re 99.1 1.1E-10 2.4E-15 132.1 5.9 140 11-208 116-265 (1039)
367 cd06647 STKc_PAK_I Catalytic d 99.1 5.8E-10 1.3E-14 121.6 11.2 137 11-208 25-168 (293)
368 KOG0596 Dual specificity; seri 99.1 4.3E-10 9.3E-15 125.0 10.1 141 11-211 367-515 (677)
369 KOG1006 Mitogen-activated prot 99.1 8.8E-11 1.9E-15 119.7 4.2 139 11-207 70-220 (361)
370 cd06616 PKc_MKK4 Catalytic dom 99.1 5.9E-10 1.3E-14 120.8 10.7 138 11-206 10-159 (288)
371 KOG3087 Serine/threonine prote 99.1 1.7E-09 3.6E-14 105.7 12.5 145 9-203 11-164 (229)
372 KOG4717 Serine/threonine prote 99.1 4.2E-10 9.1E-15 123.5 9.3 148 10-210 23-174 (864)
373 KOG0586 Serine/threonine prote 99.1 7.1E-10 1.5E-14 125.3 11.4 140 11-207 62-207 (596)
374 KOG0664 Nemo-like MAPK-related 99.1 1.7E-09 3.7E-14 110.4 13.0 49 166-216 169-217 (449)
375 cd08218 STKc_Nek1 Catalytic do 99.1 1.1E-09 2.3E-14 116.5 12.2 139 11-207 6-153 (256)
376 cd05118 STKc_CMGC Catalytic do 99.1 6.2E-10 1.4E-14 119.9 10.5 144 11-209 5-152 (283)
377 cd08530 STKc_CNK2-like Catalyt 99.0 5.3E-10 1.1E-14 118.5 9.7 140 11-207 6-155 (256)
378 cd07849 STKc_ERK1_2_like Catal 99.0 4.8E-10 1E-14 124.7 9.8 75 128-207 82-158 (336)
379 cd07866 STKc_BUR1 Catalytic do 99.0 3.4E-10 7.3E-15 123.9 8.1 76 129-207 90-167 (311)
380 cd08528 STKc_Nek10 Catalytic d 99.0 6.8E-10 1.5E-14 119.0 10.2 81 126-208 81-167 (269)
381 KOG1035 eIF-2alpha kinase GCN2 99.0 2.2E-10 4.9E-15 137.3 6.9 75 129-205 671-747 (1351)
382 PHA02882 putative serine/threo 99.0 9.3E-10 2E-14 120.1 11.3 74 129-206 102-177 (294)
383 cd07857 STKc_MPK1 Catalytic do 99.0 7.5E-10 1.6E-14 123.0 10.5 139 11-207 6-157 (332)
384 cd07851 STKc_p38 Catalytic dom 99.0 4.7E-10 1E-14 125.3 8.9 75 128-207 94-170 (343)
385 cd07838 STKc_CDK4_6_like Catal 99.0 1.4E-09 3.1E-14 117.4 12.1 144 11-207 5-159 (287)
386 KOG0984 Mitogen-activated prot 99.0 5.8E-10 1.3E-14 110.0 8.0 141 11-209 52-203 (282)
387 cd05074 PTKc_Tyro3 Catalytic d 99.0 9.7E-10 2.1E-14 118.0 10.5 139 11-206 5-164 (273)
388 cd05092 PTKc_TrkA Catalytic do 99.0 1.2E-09 2.7E-14 118.0 11.3 139 11-206 11-173 (280)
389 cd05043 PTK_Ryk Pseudokinase d 99.0 1.1E-09 2.3E-14 118.3 10.8 139 11-207 12-169 (280)
390 cd07856 STKc_Sty1_Hog1 Catalyt 99.0 1.2E-09 2.6E-14 121.2 11.0 139 11-206 16-159 (328)
391 cd08226 PK_STRAD_beta Pseudoki 99.0 1.6E-09 3.4E-14 120.2 11.8 137 12-203 5-149 (328)
392 cd07855 STKc_ERK5 Catalytic do 99.0 5.2E-10 1.1E-14 124.4 7.2 140 11-206 11-158 (334)
393 PHA03210 serine/threonine kina 99.0 8E-10 1.7E-14 129.8 9.1 79 126-207 235-319 (501)
394 cd08225 STKc_Nek5 Catalytic do 99.0 1E-09 2.2E-14 116.5 9.1 142 10-207 5-154 (257)
395 KOG1167 Serine/threonine prote 99.0 5.4E-10 1.2E-14 121.1 6.8 74 126-204 107-182 (418)
396 cd07842 STKc_CDK8_like Catalyt 99.0 1.2E-09 2.6E-14 119.9 9.8 145 11-207 6-164 (316)
397 cd07834 STKc_MAPK Catalytic do 99.0 7.6E-10 1.6E-14 122.6 8.0 77 128-208 78-156 (330)
398 KOG0599 Phosphorylase kinase g 99.0 4.2E-10 9.1E-15 115.0 5.3 157 4-210 15-178 (411)
399 cd06618 PKc_MKK7 Catalytic dom 99.0 1.5E-09 3.2E-14 118.5 10.0 79 126-207 86-167 (296)
400 cd07854 STKc_MAPK4_6 Catalytic 99.0 1E-09 2.3E-14 122.5 9.0 75 128-206 90-166 (342)
401 KOG0196 Tyrosine kinase, EPH ( 99.0 3.8E-10 8.3E-15 129.6 5.4 144 10-209 634-785 (996)
402 KOG0668 Casein kinase II, alph 99.0 4.1E-10 8.9E-15 112.5 4.9 143 11-209 44-187 (338)
403 cd07858 STKc_TEY_MAPK_plant Ca 99.0 1.3E-09 2.8E-14 121.4 9.5 76 128-207 83-160 (337)
404 cd07829 STKc_CDK_like Catalyti 99.0 2.7E-09 5.9E-14 114.9 11.5 78 127-207 71-150 (282)
405 cd07852 STKc_MAPK15 Catalytic 99.0 2.2E-09 4.7E-14 119.5 11.0 140 11-207 13-159 (337)
406 smart00220 S_TKc Serine/Threon 99.0 1.3E-09 2.9E-14 113.6 8.5 79 127-208 60-140 (244)
407 KOG0669 Cyclin T-dependent kin 99.0 1.9E-10 4.1E-15 116.3 1.6 75 127-207 97-176 (376)
408 KOG0579 Ste20-like serine/thre 98.9 2.8E-10 6E-15 127.2 1.8 81 126-208 101-183 (1187)
409 KOG4645 MAPKKK (MAP kinase kin 98.9 6.4E-10 1.4E-14 134.1 4.3 141 11-208 1241-1387(1509)
410 KOG0670 U4/U6-associated splic 98.9 4.7E-09 1E-13 115.8 10.5 144 12-209 439-591 (752)
411 cd08216 PK_STRAD Pseudokinase 98.9 5.6E-09 1.2E-13 114.7 11.4 79 126-206 71-152 (314)
412 KOG3653 Transforming growth fa 98.9 3.2E-09 6.9E-14 116.4 8.8 142 11-208 216-369 (534)
413 cd05154 ACAD10_11_like Acyl-Co 98.9 1.3E-08 2.9E-13 105.6 11.6 145 9-207 2-209 (223)
414 KOG0603 Ribosomal protein S6 k 98.9 3.1E-09 6.7E-14 120.8 7.1 85 121-208 382-469 (612)
415 KOG1027 Serine/threonine prote 98.8 4.3E-09 9.3E-14 122.3 7.7 137 10-208 514-664 (903)
416 cd08222 STKc_Nek11 Catalytic d 98.8 3.5E-09 7.7E-14 112.8 6.4 77 126-205 74-155 (260)
417 PRK15123 lipopolysaccharide co 98.8 4.4E-08 9.5E-13 104.9 14.6 100 85-203 75-193 (268)
418 KOG2270 Serine/threonine prote 98.8 2.8E-08 6E-13 106.7 12.1 186 11-238 150-340 (520)
419 KOG0690 Serine/threonine prote 98.8 3E-09 6.4E-14 111.2 4.6 145 6-204 168-317 (516)
420 KOG1151 Tousled-like protein k 98.8 1.3E-08 2.9E-13 110.0 9.7 148 11-209 469-627 (775)
421 KOG0696 Serine/threonine prote 98.8 3.6E-09 7.7E-14 113.6 4.9 143 11-204 355-499 (683)
422 KOG4279 Serine/threonine prote 98.8 1.2E-08 2.5E-13 115.8 8.8 141 10-206 580-727 (1226)
423 KOG0604 MAP kinase-activated p 98.8 3.5E-09 7.6E-14 109.9 4.3 140 8-206 65-215 (400)
424 KOG0607 MAP kinase-interacting 98.8 1.9E-08 4.2E-13 105.1 9.2 138 10-204 83-228 (463)
425 KOG0986 G protein-coupled rece 98.8 1.2E-08 2.6E-13 111.3 7.9 145 11-210 191-342 (591)
426 KOG1152 Signal transduction se 98.8 1.5E-08 3.2E-13 113.3 8.4 153 5-204 560-719 (772)
427 KOG0666 Cyclin C-dependent kin 98.7 1.9E-08 4E-13 105.0 7.4 79 128-207 102-188 (438)
428 KOG0576 Mitogen-activated prot 98.7 4.3E-09 9.3E-14 119.3 2.6 140 11-208 21-165 (829)
429 KOG0033 Ca2+/calmodulin-depend 98.7 1.1E-09 2.4E-14 110.5 -2.2 140 11-207 17-165 (355)
430 KOG2345 Serine/threonine prote 98.7 4.1E-08 8.9E-13 99.8 8.6 78 127-206 96-180 (302)
431 KOG0695 Serine/threonine prote 98.7 1.6E-08 3.5E-13 105.9 5.0 147 6-204 250-400 (593)
432 PF06293 Kdo: Lipopolysacchari 98.7 4.6E-08 1E-12 101.1 8.1 103 85-206 58-172 (206)
433 KOG2052 Activin A type IB rece 98.7 7.8E-08 1.7E-12 105.0 10.0 143 11-208 217-369 (513)
434 KOG1026 Nerve growth factor re 98.6 2.6E-08 5.7E-13 116.8 5.7 139 11-207 492-655 (774)
435 KOG1345 Serine/threonine kinas 98.6 1.6E-07 3.5E-12 96.5 9.6 78 127-207 95-175 (378)
436 KOG4257 Focal adhesion tyrosin 98.6 7.8E-08 1.7E-12 108.3 7.6 140 11-208 395-544 (974)
437 KOG1025 Epidermal growth facto 98.6 2.9E-08 6.4E-13 114.8 4.4 84 127-212 770-855 (1177)
438 PLN00113 leucine-rich repeat r 98.5 2.4E-07 5.3E-12 117.9 11.1 125 11-203 696-830 (968)
439 KOG0671 LAMMER dual specificit 98.5 1.6E-07 3.4E-12 101.1 7.4 171 11-243 95-292 (415)
440 TIGR02172 Fb_sc_TIGR02172 Fibr 98.5 8E-07 1.7E-11 93.2 11.8 32 172-206 153-184 (226)
441 KOG2268 Serine/threonine prote 98.5 1.8E-07 3.8E-12 99.1 5.9 180 11-237 98-278 (465)
442 KOG0665 Jun-N-terminal kinase 98.4 1.8E-07 3.9E-12 98.4 3.8 100 127-238 94-195 (369)
443 cd05150 APH Aminoglycoside 3'- 98.4 8.3E-06 1.8E-10 86.5 16.1 34 172-207 163-196 (244)
444 PF01636 APH: Phosphotransfera 98.4 2.4E-06 5.2E-11 89.2 11.6 36 171-207 165-200 (239)
445 KOG0614 cGMP-dependent protein 98.4 1.6E-07 3.4E-12 103.7 2.2 78 129-209 495-574 (732)
446 PRK09550 mtnK methylthioribose 98.3 7.8E-06 1.7E-10 92.1 15.1 52 171-225 222-275 (401)
447 cd05155 APH_ChoK_like_1 Unchar 98.3 3.7E-06 8E-11 88.8 11.3 34 171-207 163-197 (235)
448 COG0515 SPS1 Serine/threonine 98.3 3.6E-06 7.9E-11 90.7 11.5 137 11-204 6-151 (384)
449 PRK10593 hypothetical protein; 98.3 3.2E-06 6.9E-11 92.5 10.9 76 10-142 19-101 (297)
450 COG2112 Predicted Ser/Thr prot 98.3 8.5E-06 1.9E-10 79.9 12.2 125 11-203 28-154 (201)
451 KOG4278 Protein tyrosine kinas 98.2 1.2E-06 2.5E-11 98.8 5.1 138 11-208 273-418 (1157)
452 KOG0200 Fibroblast/platelet-de 98.2 5.9E-06 1.3E-10 99.3 9.9 139 12-206 303-469 (609)
453 PLN02756 S-methyl-5-thioribose 98.1 2.4E-05 5.3E-10 87.8 13.4 51 171-224 229-281 (418)
454 cd05157 ETNK_euk Ethanolamine 98.1 2.1E-05 4.6E-10 82.8 12.4 77 10-143 3-81 (235)
455 KOG0584 Serine/threonine prote 98.1 4.6E-06 1E-10 95.1 6.8 76 129-206 118-197 (632)
456 TIGR02721 ycfN_thiK thiamine k 98.1 4.2E-05 9.1E-10 81.8 13.4 137 11-207 2-178 (256)
457 PRK09902 hypothetical protein; 98.0 4.4E-05 9.5E-10 78.1 11.9 149 6-205 19-180 (216)
458 KOG1290 Serine/threonine prote 98.0 1E-05 2.2E-10 89.7 6.9 128 10-188 83-223 (590)
459 PRK12396 5-methylribose kinase 98.0 2E-05 4.4E-10 87.9 8.5 52 171-225 226-279 (409)
460 PLN00181 protein SPA1-RELATED; 98.0 7.2E-06 1.6E-10 102.1 5.6 74 127-203 53-128 (793)
461 PRK05231 homoserine kinase; Pr 98.0 5.3E-05 1.1E-09 83.8 11.9 33 171-205 186-218 (319)
462 PRK15442 beta-lactamase TEM; P 97.8 0.0011 2.4E-08 71.7 19.4 36 413-448 57-92 (284)
463 cd05152 MPH2' Macrolide 2'-Pho 97.8 0.00045 9.7E-09 74.8 16.3 35 172-208 185-220 (276)
464 cd05153 HomoserineK_II Homoser 97.8 9.5E-05 2E-09 80.8 10.6 31 172-204 175-205 (296)
465 PF14531 Kinase-like: Kinase-l 97.7 7.7E-05 1.7E-09 80.2 8.2 40 166-207 158-197 (288)
466 PF00768 Peptidase_S11: D-alan 97.7 0.00023 5.1E-09 75.1 11.7 45 391-448 20-64 (240)
467 COG1686 DacC D-alanyl-D-alanin 97.7 0.00019 4.2E-09 80.6 11.4 45 391-448 47-91 (389)
468 PF03881 Fructosamin_kin: Fruc 97.7 7.3E-05 1.6E-09 81.0 7.8 72 10-139 22-97 (288)
469 cd05156 ChoK_euk Choline Kinas 97.7 0.0002 4.4E-09 78.5 10.8 37 171-207 178-216 (302)
470 TIGR00938 thrB_alt homoserine 97.7 0.00033 7.2E-09 77.0 12.5 33 171-205 186-218 (307)
471 COG2334 Putative homoserine ki 97.6 0.00022 4.8E-09 78.6 10.3 29 174-204 199-228 (331)
472 TIGR01767 MTRK 5-methylthiorib 97.6 0.00021 4.6E-09 79.0 10.1 51 171-224 191-243 (370)
473 PLN02876 acyl-CoA dehydrogenas 97.6 0.00023 4.9E-09 88.8 10.9 83 8-143 41-133 (822)
474 PRK10001 D-alanyl-D-alanine ca 97.6 0.00031 6.8E-09 79.2 10.2 45 391-448 48-92 (400)
475 PF10707 YrbL-PhoP_reg: PhoP r 97.5 0.0023 5.1E-08 65.4 14.8 156 10-206 6-174 (199)
476 PRK10793 D-alanyl-D-alanine ca 97.4 0.00094 2E-08 75.6 11.8 45 391-448 55-99 (403)
477 KOG2269 Serine/threonine prote 97.4 0.00046 9.9E-09 73.6 8.5 192 4-238 252-459 (531)
478 PRK06148 hypothetical protein; 97.4 0.0029 6.3E-08 80.4 17.0 35 171-205 202-237 (1013)
479 PRK11397 dacD D-alanyl-D-alani 97.4 0.001 2.2E-08 74.8 10.9 44 391-447 45-88 (388)
480 PRK11768 serine/threonine prot 97.2 0.0019 4E-08 71.8 10.7 30 171-204 195-224 (325)
481 COG3001 Uncharacterized protei 97.2 0.0032 7E-08 64.6 11.2 75 10-142 21-99 (286)
482 PLN02236 choline kinase 97.0 0.004 8.7E-08 69.6 11.5 35 172-207 200-234 (344)
483 PRK11669 pbpG D-alanyl-D-alani 96.9 0.0046 9.9E-08 67.3 9.6 41 391-448 50-90 (306)
484 KOG4158 BRPK/PTEN-induced prot 96.7 0.0015 3.4E-08 71.1 4.7 73 128-203 317-393 (598)
485 PLN02421 phosphotransferase, a 96.7 0.0079 1.7E-07 66.9 10.0 34 173-207 183-216 (330)
486 KOG0590 Checkpoint kinase and 96.6 0.0017 3.6E-08 77.7 4.5 70 133-206 400-471 (601)
487 PRK06149 hypothetical protein; 96.6 0.0084 1.8E-07 76.1 11.0 34 171-204 207-243 (972)
488 KOG1240 Protein kinase contain 96.5 0.0014 3.1E-08 79.5 2.4 36 166-203 133-168 (1431)
489 COG3173 Predicted aminoglycosi 96.4 0.012 2.6E-07 64.4 8.9 36 171-208 197-232 (321)
490 PF04655 APH_6_hur: Aminoglyco 96.4 0.0057 1.2E-07 65.0 6.1 32 11-42 8-39 (253)
491 KOG0606 Microtubule-associated 96.3 0.0018 3.9E-08 78.5 2.4 37 166-204 156-192 (1205)
492 KOG0603 Ribosomal protein S6 k 96.2 0.0071 1.5E-07 70.0 6.1 104 126-243 69-174 (612)
493 PF01633 Choline_kinase: Choli 96.1 0.018 3.9E-07 59.6 8.3 34 172-206 143-176 (211)
494 PRK10271 thiK thiamine kinase; 95.3 0.058 1.2E-06 54.5 7.7 34 171-207 76-109 (188)
495 PTZ00384 choline kinase; Provi 95.0 0.14 3.1E-06 57.9 10.8 30 172-204 227-256 (383)
496 KOG1033 eIF-2alpha kinase PEK/ 94.7 0.0051 1.1E-07 69.8 -1.9 76 129-209 331-410 (516)
497 PF13095 FTA2: Kinetochore Sim 94.1 0.37 8.1E-06 49.3 10.2 25 11-36 43-68 (207)
498 PTZ00296 choline kinase; Provi 94.1 0.31 6.7E-06 56.3 11.0 79 7-142 107-194 (442)
499 PF12260 PIP49_C: Protein-kina 93.2 0.099 2.1E-06 53.2 4.4 83 119-206 21-113 (188)
500 smart00587 CHK ZnF_C4 abd HLH 92.8 0.096 2.1E-06 53.6 3.7 37 171-207 119-158 (196)
No 1
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=100.00 E-value=2.5e-55 Score=500.62 Aligned_cols=315 Identities=31% Similarity=0.542 Sum_probs=277.7
Q ss_pred CccccccccccccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCC---CChHHHHHHHHH
Q 002927 1 MGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQ---YDFNPIIDEWCK 77 (864)
Q Consensus 1 ~~~~F~~fd~~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~---~~~~~~~~e~~~ 77 (864)
++++|++|+++|||||||||||+|++++|++|||||||||+++.+..|+.+++.+++++.+..+. +++..+++||.+
T Consensus 121 iee~F~eF~~~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~ 200 (517)
T COG0661 121 IEELFSEFEPEPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEK 200 (517)
T ss_pred HHHHHHHcCCCchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999988765 999999999999
Q ss_pred HhHhhccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--cCCceEEEeecCCcCCCChHHHhhcCCCHH
Q 002927 78 EAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQ 155 (864)
Q Consensus 78 ~~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~ 155 (864)
.+..|+||++||+|+++|+++|+ +++.++||+||| |+++||||||++|.++.+...++..|.|++
T Consensus 201 ~l~~ElDy~~EA~n~~~~~~nf~-------------~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k 267 (517)
T COG0661 201 RLREELDYRREAANAERFRENFK-------------DDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGIDRK 267 (517)
T ss_pred HHHHHhCHHHHHHHHHHHHHHcC-------------CCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcCCCHH
Confidence 99999999999999999999986 578999999997 899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHHHHHHHHHHHHHhCCHHHHHHHHHHc
Q 002927 156 KVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEM 235 (864)
Q Consensus 156 ~l~~~~~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~ 235 (864)
.+++.++++|++|++.+||||||||||||+|+.+ |+++++||||++++++.+|..++++++++..+|++.+++.+.++
T Consensus 268 ~ia~~~~~~f~~q~~~dgffHaDpHpGNi~v~~~--g~i~~lDfGi~g~l~~~~r~~l~~~~~a~~~rD~~~v~~~~~~~ 345 (517)
T COG0661 268 ELAELLVRAFLRQLLRDGFFHADPHPGNILVRSD--GRIVLLDFGIVGRLDPKFRRYLAELLLAFLNRDYDRVAELHVEL 345 (517)
T ss_pred HHHHHHHHHHHHHHHhcCccccCCCccceEEecC--CcEEEEcCcceecCCHHHHHHHHHHHHHHHhhCHHHHHHHHHHh
Confidence 9999999999999999999999999999999976 99999999999999999999999999999999999999999999
Q ss_pred CCCcC-CCcHHHHHHHHHHHHhccC-ChhhHHHHHHHHHHHHHhhHHHHHHHHHhhHHHHhhcCCCCCCCchhHHHHHHH
Q 002927 236 GLRLR-LDVPEQAMEVSTLFFRTSA-PANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNPVDAFPGDIVIFSRVL 313 (864)
Q Consensus 236 G~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~R~~ 313 (864)
|.... .|......++..++-.... +..+ + +..+.+.+.+.. ..+|+ +++|++++++.|++
T Consensus 346 G~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-------~-----~~~~~~~~~~~~----~~~~~--~r~p~~l~ll~r~~ 407 (517)
T COG0661 346 GYVPPDTDRDPLAAAIRAVLEPIYGKPLEE-------I-----SFGEILDKLFEV----ARRFP--MRLPPELVLLQRTL 407 (517)
T ss_pred CCCCCccchHHHHHHHHHHHHhhhCCChhh-------c-----cHHHHHHHHHHH----HHhcC--ccCCHHHHHHHHHH
Confidence 99743 4555555555544332211 1111 0 111122222222 33444 79999999999999
Q ss_pred HHHHHhhhccCccceeeccccchHHHHHhhhcCCC
Q 002927 314 NLLRGLSSTMNVRIVYLDIMRPFAEYVLQVGINKE 348 (864)
Q Consensus 314 ~~leg~~~~L~p~~~~~~~~~p~~~~~L~~~l~p~ 348 (864)
.++||++++|+|++|++.++.|++.+....++.+.
T Consensus 408 ~~vEg~~~~ldp~~~~~~~a~p~~~~~~~~~~~~~ 442 (517)
T COG0661 408 LLVEGVGRQLDPRFNLWAVAQPLLAKWLKKQLSPK 442 (517)
T ss_pred HHHHHHHHhhCccccHHHHhhHHHHHHHHHhhhHH
Confidence 99999999999999999999999999999888775
No 2
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=100.00 E-value=1.3e-52 Score=481.92 Aligned_cols=342 Identities=30% Similarity=0.401 Sum_probs=284.7
Q ss_pred ccccccccccccccccceeeEEEEecC-CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCC---CCChHHHHHHHHH
Q 002927 2 GGMFMDFVETPLATASIAQVHRATLVD-GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEP---QYDFNPIIDEWCK 77 (864)
Q Consensus 2 ~~~F~~fd~~plasaSigqV~~A~l~~-G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~---~~~~~~~~~e~~~ 77 (864)
+++|++||++|||||||||||+|++++ |++|||||+||++.+.+..|+++++.++.++++..+ .+++..+++|+.+
T Consensus 116 ~~~F~~fd~~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~ 195 (537)
T PRK04750 116 EEWFDDFDIKPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEK 195 (537)
T ss_pred HHHHHhcChhhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHH
Confidence 578999999999999999999999987 999999999999999999999999999999997643 4688999999999
Q ss_pred HhHhhccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--cCCceEEEeecCCcCCCChHHHhhcCCCHH
Q 002927 78 EAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQ 155 (864)
Q Consensus 78 ~~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~ 155 (864)
.+.+|+||.+|++|+.+++++|. +.+.++||+||+ |+++||||||++|.++.++..+.+.+.++.
T Consensus 196 ~l~~ElD~~~Ea~N~~~~~~~f~-------------~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~ 262 (537)
T PRK04750 196 TLHDELDLMREAANASQLRRNFE-------------DSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMK 262 (537)
T ss_pred HHHHhhCHHHHHHHHHHHHHHcc-------------CCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHH
Confidence 99999999999999999999886 356799999997 999999999999999999877777889999
Q ss_pred HHHHHHHHHHHHHHHhcCeeccCCCCCCeEEccCC--CCceEEEecccccccChHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 002927 156 KVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDP--PHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFA 233 (864)
Q Consensus 156 ~l~~~~~~~~l~~i~~~G~~H~D~hPgNIlv~~~~--~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~ 233 (864)
.+++.+++.++.|+|.+||||||||||||+|+.++ +++++++|||+++.++++.|..+++++.|+..+|++.+++.+.
T Consensus 263 ~la~~~v~~~~~Qif~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~~~r~~l~~~~~a~~~~D~~~v~~~~~ 342 (537)
T PRK04750 263 LLAERGVEVFFTQVFRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNKEDKRYLAENFLAFFNRDYRRVAELHV 342 (537)
T ss_pred HHHHHHHHHHHHHHHhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 99999999999999999999999999999998651 1389999999999999999999999999999999999999999
Q ss_pred HcCCCc-CCCcHHHHHHHHHHHHhcc-CChhhHHHHHHHHHHHHHhhHHHHHHHHHhhHHHHhhcCCCCCCCchhHHHHH
Q 002927 234 EMGLRL-RLDVPEQAMEVSTLFFRTS-APANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNPVDAFPGDIVIFSR 311 (864)
Q Consensus 234 ~~G~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~R 311 (864)
++|... ..+..++..++..++-... .+..+ + +....+.+.+.. .++|+ +++|++++++.|
T Consensus 343 ~~g~~~~~~~~~~l~~~i~~~~~~~~~~~l~~-------i-----~~~~~l~~l~~~----~r~~~--~~ip~~l~ll~k 404 (537)
T PRK04750 343 ESGWVPPDTRVEELEFAIRAVCEPIFDKPLAE-------I-----SFGHVLLRLFNT----ARRFN--VEIQPQLVLLQK 404 (537)
T ss_pred HhCCCCCCCCHHHHHHHHHHHHHHHhCCCccc-------c-----cHHHHHHHHHHH----HHHCC--CcccHHHHHHHH
Confidence 999864 3355555555544332211 12111 1 111223333443 44555 789999999999
Q ss_pred HHHHHHHhhhccCccceeeccccchHHHHHhhhcCCCCcchhh---hhccCCcchHHHHHHHHHHH
Q 002927 312 VLNLLRGLSSTMNVRIVYLDIMRPFAEYVLQVGINKEPSVSAE---WIYSKPIHSDVEAKLRDFLV 374 (864)
Q Consensus 312 ~~~~leg~~~~L~p~~~~~~~~~p~~~~~L~~~l~p~~~~~~~---l~~~~P~~~~l~~~l~~~l~ 374 (864)
++.++||++++|||++|++++++||+.+++.+++.+....... .........+++..+.++++
T Consensus 405 tl~~lEG~~r~LdP~~d~~~~a~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~l~~~l~ 470 (537)
T PRK04750 405 TLLNVEGLGRQLDPQLDLWKTAKPFLERWMKEQVGPRALVRALKEEAPFWAEKLPELPRLVHDSLR 470 (537)
T ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 9999999999999999999999999999999999876544322 11112223456666776665
No 3
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=100.00 E-value=4.4e-49 Score=449.11 Aligned_cols=316 Identities=28% Similarity=0.494 Sum_probs=271.1
Q ss_pred CccccccccccccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCC---CCChHHHHHHHHH
Q 002927 1 MGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEP---QYDFNPIIDEWCK 77 (864)
Q Consensus 1 ~~~~F~~fd~~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~---~~~~~~~~~e~~~ 77 (864)
++++|.+||++|||+|||||||+|++++|++||||||||++.+.+..|+++++.++.++.+..+ .+++..+++||.+
T Consensus 113 ~~~~F~~fd~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 192 (437)
T TIGR01982 113 LEELFAEFEEKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEK 192 (437)
T ss_pred HHHHHhhCCCcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHH
Confidence 3578999999999999999999999999999999999999999999999999999999887643 4689999999999
Q ss_pred HhHhhccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--cCCceEEEeecCCcCCCChHHHhhcCCCHH
Q 002927 78 EAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQ 155 (864)
Q Consensus 78 ~~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~ 155 (864)
.+.+|+||.+||+|+++|+++|+ +.+.++||++|+ |+++||||||++|.+|.++......+.++.
T Consensus 193 ~l~~Eldf~~Ea~n~~~~~~~~~-------------~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~ 259 (437)
T TIGR01982 193 TLRRELDLRREAANASELGENFK-------------NDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLDRK 259 (437)
T ss_pred HHHHHHCHHHHHHHHHHHHHhcC-------------CCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCCHH
Confidence 99999999999999999999876 467899999997 899999999999999999876655667888
Q ss_pred HHHHHHHHHHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHHHHHHHHHHHHHhCCHHHHHHHHHHc
Q 002927 156 KVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEM 235 (864)
Q Consensus 156 ~l~~~~~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~ 235 (864)
+++..+++.++.|+|.+|+||||||||||+++++ |+++|+|||+++.++++.+..+.+++.++..+|++.+.+.+.++
T Consensus 260 ~ia~~~~~~~l~ql~~~g~~H~D~hPgNilv~~~--g~i~liDfG~~~~l~~~~r~~l~~l~~a~~~~D~~~l~~~l~~~ 337 (437)
T TIGR01982 260 ALAENLARSFLNQVLRDGFFHADLHPGNIFVLKD--GKIIALDFGIVGRLSEEDRRYLAEILYGFLNRDYRRVAEVHFDA 337 (437)
T ss_pred HHHHHHHHHHHHHHHhCCceeCCCCcccEEECCC--CcEEEEeCCCeeECCHHHHHHHHHHHHHHHhcCHHHHHHHHHHc
Confidence 9999999999999999999999999999999865 89999999999999999999999999999999999999999999
Q ss_pred CCCc-CCCcHHHHHHHHHHHHhccC-ChhhHHHHHHHHHHHHHhhHHHHHHHHHhhHHHHhhcCCCCCCCchhHHHHHHH
Q 002927 236 GLRL-RLDVPEQAMEVSTLFFRTSA-PANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNPVDAFPGDIVIFSRVL 313 (864)
Q Consensus 236 G~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~R~~ 313 (864)
|+.. ..|...+..++..++..... +. .++ +....+.+.++. ..++. +++|++++++.|++
T Consensus 338 g~~~~~~d~~~~~~~~~~~~~~~~~~~~-------~~~-----~~~~~~~~~~~~----~~~~~--~~~p~~~~~l~r~l 399 (437)
T TIGR01982 338 GYVPSDTDMAEFEQAIRAIGEPIFGQPL-------KEI-----SVGRLLAGLFKI----TRDFN--MELQPQLLLLQKTL 399 (437)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHhCCCh-------hhC-----CHHHHHHHHHHH----HHHCC--ccCCHHHHHHHHHH
Confidence 9864 34555555555544322111 11 111 111223333333 33443 68999999999999
Q ss_pred HHHHHhhhccCccceeeccccchHHHHHhhhcCCCC
Q 002927 314 NLLRGLSSTMNVRIVYLDIMRPFAEYVLQVGINKEP 349 (864)
Q Consensus 314 ~~leg~~~~L~p~~~~~~~~~p~~~~~L~~~l~p~~ 349 (864)
.++||++++|+|++|+.++++||+.+.+.++++++.
T Consensus 400 ~~leg~~~~L~p~~~~~~~~~p~~~~~~~~~~~~~~ 435 (437)
T TIGR01982 400 LTVEGVGRQLDPDLNMWKVAEPFVKRWIRKRLGPKA 435 (437)
T ss_pred HHHHHHHHHhCCCCCHHHHHHHHHHHHHHhhcChhc
Confidence 999999999999999999999999999999887753
No 4
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=100.00 E-value=2.7e-48 Score=440.06 Aligned_cols=325 Identities=31% Similarity=0.507 Sum_probs=261.9
Q ss_pred CccccccccccccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhH
Q 002927 1 MGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAP 80 (864)
Q Consensus 1 ~~~~F~~fd~~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~ 80 (864)
++++|++||++|||+||+||||+|++++|+.||||||||++++.+..|+.+++.++..+.+..|.+++.++++|+.+.+.
T Consensus 157 ie~if~~f~~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~ 236 (538)
T KOG1235|consen 157 IEDIFSEFDEEPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLP 236 (538)
T ss_pred HHHHHHhcCcchhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--cCCceEEEeecCCcCCCChHHHhhcCCCHHHHH
Q 002927 81 KELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVV 158 (864)
Q Consensus 81 ~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~ 158 (864)
.|+||.+||+|+++++++|++.+ ....|.||+||| |+++||||||++|++++|+..+++.++++.+++
T Consensus 237 ~ELDF~~EA~Nae~~~~~f~~~~----------~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~~gi~~~~i~ 306 (538)
T KOG1235|consen 237 QELDFTKEAKNAERFRENFKDFS----------LLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDKRGISPHDIL 306 (538)
T ss_pred hhcchHHHHHhHHHHHHHHHhcc----------cccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHHcCCCHHHHH
Confidence 99999999999999999997421 123699999998 899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCeeccCCCCCCeEEccC--CCCceEEEecccccccChHHHHHHHHHHHHHHhCCHHHHHHHHHHcC
Q 002927 159 EEITRAYAHQIYVDGFFNGDPHPGNFLVSKD--PPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMG 236 (864)
Q Consensus 159 ~~~~~~~l~~i~~~G~~H~D~hPgNIlv~~~--~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~G 236 (864)
..+.++|++|||.+||||||||||||+|+++ ++++++|+|||+++.++...|..++++|+++...|...+......+|
T Consensus 307 ~~l~~~~~~qIf~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~~~r~~~~~~~~a~~~~d~~~~~~~~~~~g 386 (538)
T KOG1235|consen 307 NKLVEAYLEQIFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISHKTRKDYAELWLALVFEDEKAMQALAEQLG 386 (538)
T ss_pred HHHHHHHHHHHHhcCCccCCCCCCcEEEecCCCCCccEEEEcccccccccHHHHHHHHHHHHHHhcccHHHHHHHHHHhc
Confidence 9999999999999999999999999999964 35889999999999999999999999999999999999999999999
Q ss_pred CCcCCCcHHHHHHHHHHHHhccCChhhHHHHHHHHHHHHHhhHHHHHHHHHhhHHHHhhcCCCCCCCchhHHHHHHHHHH
Q 002927 237 LRLRLDVPEQAMEVSTLFFRTSAPANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNPVDAFPGDIVIFSRVLNLL 316 (864)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~R~~~~l 316 (864)
...+.+.+.++.++.....+...+.. .....+..........+.....+....+.+ .++|..+.++.|+...+
T Consensus 387 ~~~d~~~~~fa~~l~~~~~~s~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L------~~~p~~i~li~k~~~l~ 459 (538)
T KOG1235|consen 387 LGLDDLYPLFATALTGRPWDSVIGAG-ITKYLKGLEEDADENQKIASAKFPGISQLL------RRMPREILLILKTNDLL 459 (538)
T ss_pred cccchhhhhhHHHHhCCchhhccccc-hhhhhhhhhhhhhhHHHHHHHHhhHHHHHH------HhchHhhhhhcccHHHH
Confidence 87544555555554432222211100 000001111111111111112221111111 46899999999999999
Q ss_pred HHhhhccCccceeeccccchHHHHHh
Q 002927 317 RGLSSTMNVRIVYLDIMRPFAEYVLQ 342 (864)
Q Consensus 317 eg~~~~L~p~~~~~~~~~p~~~~~L~ 342 (864)
+++...|+-..+....+..+.+..++
T Consensus 460 r~~~~~l~~~~~~~~~f~~~~~~~~~ 485 (538)
T KOG1235|consen 460 RGLSSNLGIPSSLERSFLEMARLCLR 485 (538)
T ss_pred HhHHHHhccccccchHHHHHHHHHHH
Confidence 99999998888764344444444433
No 5
>PRK11289 ampC beta-lactamase/D-alanine carboxypeptidase; Provisional
Probab=100.00 E-value=3.3e-46 Score=418.63 Aligned_cols=241 Identities=22% Similarity=0.301 Sum_probs=202.4
Q ss_pred chHHHHHHHHHHHHhcccCccceeEEEEeecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCC
Q 002927 362 HSDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKL 441 (864)
Q Consensus 362 ~~~l~~~l~~~l~~~~~~~~~~G~~v~v~~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l 441 (864)
..++.+.+++.+++.++++.+||++++|+++|++++. +||+++...+.|++++|+|+|||+||+||++++++|+|+|+|
T Consensus 28 ~~~~~~~vd~~i~~~~~~~~~pG~~vaV~~~g~~~~~-~~G~~~~~~~~p~~~dT~f~iaSvTK~fTa~~i~~Lve~G~L 106 (384)
T PRK11289 28 PQQLKDIVDRTITPLMEEQDIPGMAVAVIYNGKPYYF-NYGVADKATGQPVTQDTLFELGSVSKTFTATLAGYAQARGEL 106 (384)
T ss_pred hHHHHHHHHHHHHHHHHhCCCCeEEEEEEECCEEEEE-eeeecccccCCCCCCCCEEeeeechHHHHHHHHHHHHHCCCC
Confidence 4578889999999999999999999999999998875 899999999999999999999999999999999999999999
Q ss_pred CccCchhhhcccCccCCCCccCHHhHhcCCCC-CCCCCCCccCCCCcCCCCHHHHHHHHHccCCCCCCCCceecccCcHH
Q 002927 442 KLEENIANIWPEFKSNGKDLIKVHHVLNHTSG-LHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFG 520 (864)
Q Consensus 442 ~ld~~v~~ylP~~~~~~~~~ITir~LLtHtSG-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pg~~~~Ysn~~~~ 520 (864)
+|||||.+|+|+|...++++|||||||+|||| ++...+. ...+.+++++.+...++.++||+.|.|||.+|.
T Consensus 107 ~Lddpv~~ylP~~~~~~~~~ITir~LLtHtSGg~p~~~~~-------~~~~~~~l~~~l~~~~~~~~PG~~~~YSn~~y~ 179 (384)
T PRK11289 107 SLSDPASKYLPELKGSPFDGITLLHLATYTAGGLPLQVPD-------EVKDDAQLLRYFQAWQPAYAPGTQRLYSNPSIG 179 (384)
T ss_pred CCCCcHHHhCcccCCCCcCCeEHHHHhccccCCCcccCCc-------ccCCHHHHHHHHHhCCCCCCCCCCeeechHHHH
Confidence 99999999999998766789999999999995 7753221 235677888888888999999999999999998
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHhhhccCCCCccCCCCCCCccccccceeccCCcccccccCCCCCCCCCCCCCCcchhhh
Q 002927 521 WLCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQ 600 (864)
Q Consensus 521 ~lLg~iie~vtG~~~~~~~~~~if~PLgm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 600 (864)
|||.|||++||++|+++++++||+||||++|.+ ..++....+.+.+|...... .. ..
T Consensus 180 -lLg~iiE~vtg~~~~~~l~~~I~~PLGM~~T~~-~~~~~~~~~~a~gy~~~g~~--~~---~~---------------- 236 (384)
T PRK11289 180 -LFGYLAAKAMGQPFEQLMEQRLFPPLGLTHTYI-NVPEAEMADYAQGYNKEGKP--VR---VN---------------- 236 (384)
T ss_pred -HHHHHHHHHHCcCHHHHHHHhhhhhcCCCcccc-CCCccccccceeeeccCCCc--ee---cC----------------
Confidence 999999999999999999999999999999855 34444555666665322111 00 00
Q ss_pred hhcccccccccccccccccCCcceecCHHHHHHHHHHHHcCCCCCC
Q 002927 601 LAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPP 646 (864)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlakf~~~ll~gg~l~~ 646 (864)
+.+ ...|+||++||+.||+||++++++++.+++
T Consensus 237 -----------~~~--~~~~aGgl~ST~~Dl~~f~~all~~~~l~~ 269 (384)
T PRK11289 237 -----------PGV--LDAEAYGVKSTAADMLRFVQANLGPQDLDP 269 (384)
T ss_pred -----------CCc--ccCCceeeEECHHHHHHHHHHHcCCCCCCH
Confidence 000 012789999999999999999999887643
No 6
>PRK10662 beta-lactam binding protein AmpH; Provisional
Probab=100.00 E-value=2.1e-45 Score=412.34 Aligned_cols=247 Identities=19% Similarity=0.239 Sum_probs=198.8
Q ss_pred CcchHHHHHHHHHHHHhcccCccceeEEEEeecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCC
Q 002927 360 PIHSDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNG 439 (864)
Q Consensus 360 P~~~~l~~~l~~~l~~~~~~~~~~G~~v~v~~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G 439 (864)
|....+.+.+++++++.++++.+||++++|+++|++++ .+||+++...+.+++++|+|+|+|+||+||++++++|+|+|
T Consensus 26 ~~~~~~~~~id~~~~~~~~~~~~pG~~v~V~~~g~i~~-~~~G~~~~~~~~~~t~dT~f~iaSiTK~fta~ai~~Lve~G 104 (378)
T PRK10662 26 ADPLLASDIVDRYAEHIFYGSGATGMALVVIDGNQRVF-RSYGETRPGNNVRPQLDSLIRIASITKLMTSEVLVKLADDG 104 (378)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEECCEEEE-EeeeeccCCCCCCCCCCCeEEeeeecHHHHHHHHHHHHHCC
Confidence 33457788899999999999999999999999999888 68999999999999999999999999999999999999999
Q ss_pred CCCccCchhhhcccCc---cCCCCccCHHhHhcCCCCCCCCCCCccCCCCcC-CCCHHHHHHHHHccCCCCCCCCceecc
Q 002927 440 KLKLEENIANIWPEFK---SNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLL-ICDWDECLNRIALSAPETEPGQEQLYH 515 (864)
Q Consensus 440 ~l~ld~~v~~ylP~~~---~~~~~~ITir~LLtHtSGl~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~pg~~~~Ys 515 (864)
+|+||+||++|+|++. ....++|||||||+||||++.+........+.. ..+.++.++.+...++.++||+.|.||
T Consensus 105 ~l~lddpv~~ylP~~~~~~~~~~~~ITir~LLsHtSGl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~PGt~~~Ys 184 (378)
T PRK10662 105 TVKLTDPLSKYAPPGARVPTYNGQPITLLNLATHTSALPREQPGGAAHRPVFVWPTREQRWKWLSTAKLKAAPGTQAAYS 184 (378)
T ss_pred CCCCCCcHHHhCcccccCCCCCCCCccHHHHhhCcCCCCCCCCCccccCCcccCCCHHHHHHHHhcCCCcCCCCCceeec
Confidence 9999999999999853 222278999999999999997543221111111 125677888888889999999999999
Q ss_pred cCcHHHHHHHHHHHHhCCCHHHHHHHHhhhccCCCCccCCCCCCCccccccceeccCCcccccccCCCCCCCCCCCCCCc
Q 002927 516 YLSFGWLCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQP 595 (864)
Q Consensus 516 n~~~~~lLg~iie~vtG~~~~~~~~~~if~PLgm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 595 (864)
|.+|. |||.|||++||++|.+|++++||+||||++|.|.. .+....+.+..|. .. .+.
T Consensus 185 n~~~~-lLg~iie~vtg~~~~~~l~~~I~~PLGM~~T~~~~-~~~~~~~~a~g~~-~~----------~~~--------- 242 (378)
T PRK10662 185 NLAFD-LLADALAKAAGKPYTQLLREKITRPLGMKDTTFTP-SPDQCARLMVGEK-GA----------SPC--------- 242 (378)
T ss_pred chhHH-HHHHHHHHHhCCCHHHHHHHhCccccCCCCCcCCC-ChhhhhhcccccC-CC----------CCC---------
Confidence 99999 99999999999999999999999999999997642 2222333343330 00 000
Q ss_pred chhhhhhcccccccccccccccccCCcceecCHHHHHHHHHHHHcCCCCCC
Q 002927 596 DKISQLAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPP 646 (864)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlakf~~~ll~gg~l~~ 646 (864)
.+ .....|+||++||++||+||+++++++|.+..
T Consensus 243 -------------~~----~~~~~~aGGl~sT~~Dmak~~~~ll~~g~~~~ 276 (378)
T PRK10662 243 -------------NN----TLAAIGSGGVYSTPGDMMRWMQQFLSSDNYQR 276 (378)
T ss_pred -------------cc----ccccCCCCccccCHHHHHHHHHHHhCCCCCCc
Confidence 00 01224899999999999999999999887644
No 7
>PRK03642 putative periplasmic esterase; Provisional
Probab=100.00 E-value=1.5e-44 Score=412.42 Aligned_cols=269 Identities=19% Similarity=0.309 Sum_probs=193.5
Q ss_pred HHHHHHHHHHHHhcccCccceeEEEEeecCeEEEEeeeeccCCC-------CCCCCCCCCccccccccHHHH-HHHHHHH
Q 002927 364 DVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRY-------DPRPVQPDSLFPVFSVTKGIT-AGMLHWL 435 (864)
Q Consensus 364 ~l~~~l~~~l~~~~~~~~~~G~~v~v~~~g~~v~~~~~G~~~~~-------~~~~~~~~t~f~i~SiTK~~t-a~~i~~l 435 (864)
+..+.+++.+++.+++ .+||++++|+++|+++++++||+++.. .+.|+++||+|+|+|+||+|| ++++++|
T Consensus 38 ~~~~~ld~~i~~~~~~-~~pG~sv~V~~~g~iv~~~~~G~~~~~~g~~~~~~~~~~t~dT~f~iaSiTK~ftt~~ai~~L 116 (432)
T PRK03642 38 EKLNQMDRWISQQIDA-GYPGVNLLIIKDNQIVYRKAWGYAKKYDGSTLLAHPVKATTNTMYDLASNTKMYATNFALQKL 116 (432)
T ss_pred HHHHHHHHHHHHHHhc-CCCeEEEEEEECCEEEEEeeeeeccccccccccccCCCCCCCCEEechhhhHHHHHHHHHHHH
Confidence 4457788888887775 589999999999999999999998853 457899999999999999997 5888999
Q ss_pred HHCCCCCccCchhhhcccCccC------CCCccCHHhHhcCCCCCCCCCCCccC--CCCcCCCCHHHHHHHHHccCCCCC
Q 002927 436 VDNGKLKLEENIANIWPEFKSN------GKDLIKVHHVLNHTSGLHNVSVDLSS--ENPLLICDWDECLNRIALSAPETE 507 (864)
Q Consensus 436 ve~G~l~ld~~v~~ylP~~~~~------~~~~ITir~LLtHtSGl~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~ 507 (864)
+|+|+|+||+||.+|||+|... ++++|||||||+||||++........ .......+.+++++.+...++.++
T Consensus 117 ve~G~l~ldd~v~~ylP~~~~~~~~~~~~~~~ITir~LLtHtSGl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~ 196 (432)
T PRK03642 117 VSEGKLDVNDLISKYIPGFKDSPGDKIKGKNTLRIIDLLHHSAGFPADPQYPNKAVAGALYSQDKSTTLEMIKKTPLEYQ 196 (432)
T ss_pred HHCCCCCCcCcHHHhcccccccccccccCCCCCcHHHHhhCccCCCCCcccccccccccccccCHHHHHHHHhhCCCcCC
Confidence 9999999999999999999742 34689999999999999874321111 111112355778888888999999
Q ss_pred CCCceecccCcHHHHHHHHHHHHhCCCHHHHHHHHhhhccCCCCccCCCCCCC-ccccccceeccCCcccccccCCCCCC
Q 002927 508 PGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPG-VESRLASLTIDTDDLNKVSGINNRPD 586 (864)
Q Consensus 508 pg~~~~Ysn~~~~~lLg~iie~vtG~~~~~~~~~~if~PLgm~~t~~~~~~~~-~~~~~a~~~~~~~~~~~~~~~~~~p~ 586 (864)
||+.|.|||.+|. |||.|||+++|++|.+|++++||+||||++|+|...... ...+.+......... .+....|.
T Consensus 197 PG~~~~Ysn~~~~-lLg~iie~vtG~~~~~~~~e~If~PLgM~~t~~~~~~~~~~~~~~a~~~~~g~~~---~~~~~~p~ 272 (432)
T PRK03642 197 PGSKHIYSDVDYM-LLGFIVESITGQPLDRYVEESIYRPLGLTHTVFNPLQKGFKPQQIAATELNGNTR---DGVIHFPN 272 (432)
T ss_pred CCCceEecchHHH-HHHHHHHHHhCCCHHHHHHHhhhcccCCCcCcccCccccccHhhcCcccccCccc---cccccccc
Confidence 9999999999998 999999999999999999999999999999876421110 111222111000000 00000000
Q ss_pred CCCCCCCCcchhhhhhcccccccccccccccccCCcceecCHHHHHHHHHHHHcCCCCCCC
Q 002927 587 LRLPSSFQPDKISQLAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPP 647 (864)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlakf~~~ll~gg~l~~~ 647 (864)
.+. ...+ +. ....+.........|+||+++|++||+||+++++++|.+.+.
T Consensus 273 ~~~--~~~~-------~~-~~d~~~~~~~g~~~g~gGl~sTa~Dlakf~~~lL~~G~~~g~ 323 (432)
T PRK03642 273 IRT--NTLW-------GQ-VHDEKAFYSMGGVSGHAGLFSNTGDMAVLMQVMLNGGGYGNV 323 (432)
T ss_pred ccc--Ccee-------ee-ecCcchhhhcCCcccccccccCHHHHHHHHHHHHhcCCcCCc
Confidence 000 0000 00 000000001133457899999999999999999999988776
No 8
>PRK13128 D-aminopeptidase; Reviewed
Probab=100.00 E-value=1.3e-43 Score=408.42 Aligned_cols=323 Identities=20% Similarity=0.242 Sum_probs=236.3
Q ss_pred HHHHHHHHHhcccCccceeEEEEeecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCCccCc
Q 002927 367 AKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEEN 446 (864)
Q Consensus 367 ~~l~~~l~~~~~~~~~~G~~v~v~~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~ 446 (864)
+.++++++++++++.+||++++|+++|+++++++||+++..++.|++++|+|+|||+||+|||++|++|+++|+ +||+|
T Consensus 7 ~~l~~~v~~l~~~~~~Pg~avaVv~~G~iv~~~~~G~ad~~~~~p~t~dT~f~IaSiTK~fTa~~il~Lveeg~-~LDdp 85 (518)
T PRK13128 7 PTLEAFVHAIPQNYKGPGGAVAVVKDGEVVLRHAWGFADLARRKAMTPETRMPICSVSKQFTCAVLLDCIGEPE-MLDAA 85 (518)
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEECCEEEEEEeEEeeccccCCCCCCCCeEechhhHHHHHHHHHHHHHhcCC-CCCCc
Confidence 56777777878888999999999999999999999999999999999999999999999999999999999985 99999
Q ss_pred hhhhcccCccCCCCccCHHhHhcCCCCCCCCCCCcc--CCCCcCCCCHHHHHHHHHcc-CCCCCCCCceecccCcHHHHH
Q 002927 447 IANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLS--SENPLLICDWDECLNRIALS-APETEPGQEQLYHYLSFGWLC 523 (864)
Q Consensus 447 v~~ylP~~~~~~~~~ITir~LLtHtSGl~~~~~~~~--~~~~~~~~~~~~~~~~l~~~-~~~~~pg~~~~Ysn~~~~~lL 523 (864)
|.+|||+|.. .+|||+|||+||||++++..... ...+......++..+.+... ++.++||+.|.|||.||. ||
T Consensus 86 v~~yLPe~~~---~~iTvr~LLtHTSGl~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~PGt~~~YSN~gy~-LL 161 (518)
T PRK13128 86 LAAYLDQFED---PRPAVRDLCNNQSGLRDYWALTVLCGAAPEGIFLPDQAQNLLRRLKTTHFAPGTHYSYCNGNFR-IL 161 (518)
T ss_pred HHHhcCCCCC---CCChHHHHhhCCCCCCccchhhhhcccccccCCCHHHHHHHHHhhccccCCCCCeeEEeCHHHH-HH
Confidence 9999999975 46999999999999997532211 11122234455666665553 568999999999999998 99
Q ss_pred HHHHHHHhCCCHHHHHHHHhhhccCCCCccCCCCCCCccccccceeccCCcccccccCCCCCCCCCCCCCCcchhhhhhc
Q 002927 524 GGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAA 603 (864)
Q Consensus 524 g~iie~vtG~~~~~~~~~~if~PLgm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 603 (864)
|.|||+++|++|.+|++++||+||||++|++.. .....+.+.+|......... |
T Consensus 162 g~iIE~vtG~~~~~~l~~~If~PLGM~~T~~~~--~~~~~~~a~Gy~~~~~~~~~------p------------------ 215 (518)
T PRK13128 162 ADLIEQHTGRSLADLLAERIFAPAGMKTAELIP--DTALFDECTGYEGDTVRGFL------P------------------ 215 (518)
T ss_pred HHHHHHHhCCCHHHHHHHhhhcccCCCccccCc--cccccccccccccCCCCCcc------c------------------
Confidence 999999999999999999999999999987632 22222334344211100000 0
Q ss_pred ccccccccccccccccCCcceecCHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccchhHHHHH
Q 002927 604 ITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHPHIPKFPSHETSKKQKGTKKELLA 683 (864)
Q Consensus 604 ~~~~~~~~~~~~~~~~~agG~~sTa~Dlakf~~~ll~gg~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (864)
..+. ..+.|+||++||+.||+||+++++++...+.. +++
T Consensus 216 ----~~~~----~~~~g~gGl~STa~Dma~~~~~l~~~~~~~~~---------------------------------l~~ 254 (518)
T PRK13128 216 ----AINR----IHWLGDAGICASLDDMIAWEQFIDRTRDDENG---------------------------------LYR 254 (518)
T ss_pred ----Cccc----ccccCCcceEcCHHHHHHHHHHHHccCCChHH---------------------------------HHH
Confidence 0011 12347889999999999999998765332111 122
Q ss_pred HHhhcCCCCCCCccccccCCCCccccccCccchhhhhccccCCCCCCCccCCCCCCCCCCcccccccCCcccccccccCC
Q 002927 684 ALKNKTNNSEHGHKYTKDLEGGSHIRTASGDTYARLINIETSSSNTSTTDSISNTDEPQSSNVRKIFNNPRIHDAFLGVG 763 (864)
Q Consensus 684 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 763 (864)
+| ..|.+ +.+ |
T Consensus 255 ~~----------------------------------~~p~~-------------------------~~~----------g 265 (518)
T PRK13128 255 RL----------------------------------SVPQT-------------------------FAD----------G 265 (518)
T ss_pred hh----------------------------------cCCcc-------------------------ccC----------C
Confidence 12 11100 000 0
Q ss_pred CCCCCCCCCCccccCccccCCCCCCccccccCC-CCCccc--ccccCCCeEEEEEecccCCCcchHHHHHHHHHHhCCCC
Q 002927 764 DYGDLALPNGRFGLGFKRYNTRDGSYIGFGHSG-MGGSTG--FCDVNNRFAIAVTLNKMSFGATTGRIIHFVCSELNLPV 840 (864)
Q Consensus 764 ~~~~~~~~~~~~glG~~~~~~~~~~~~~~gh~G-~~G~~~--~~~P~~~~~vv~~~N~~~~~~~~~~~~~~~~~~l~~p~ 840 (864)
....||+||.+.. ..+...+||+| ..|+.+ +++|+.+++||+++|..... .....+++...++.|.
T Consensus 266 -------~~~~YGlG~~~~~--~~G~~~~gH~G~~~Gf~s~~~~~Pe~~l~vvvl~N~~~~~--~~~a~~ll~~~~g~~~ 334 (518)
T PRK13128 266 -------APAPYGFGLKFEE--TGGKRLTGHGGALRGWRCQRWHCADERLSTIVMFNFEGNA--SDAALKMMNAALGIPP 334 (518)
T ss_pred -------CCCCceeeEEEEc--CCCCEEEEecCcCCCeEEEEEEeeCCCEEEEEEECCCCch--HHHHHHHHHHHhCCCC
Confidence 1246999998865 34556899999 777766 77999999999999985432 2334555566667664
Q ss_pred c
Q 002927 841 P 841 (864)
Q Consensus 841 ~ 841 (864)
|
T Consensus 335 ~ 335 (518)
T PRK13128 335 A 335 (518)
T ss_pred C
Confidence 4
No 9
>PF00144 Beta-lactamase: Beta-lactamase; InterPro: IPR001466 This entry represents the serine beta-lactamase-like superfamily. It is a group of diverse group of sequences that includes D-alanyl-D-alanine carboxypeptidase B, aminopeptidase (DmpB), alkaline D-peptidase, animal D-Ala-D-Ala carboxypeptidase homologues and the class A and C beta-lactamases and eukaryotic beta-lactamase homologues which are variously described as: transesterases, non-ribosomal peptide synthetases and hypothetical proteins. Many are serine peptidases belonging to MEROPS peptidase families S11 (D-Ala-D-Ala carboxypeptidase A family) and S12 (D-Ala-D-Ala carboxypeptidase B family, clan SE). The beta-lactamases are classified as both S11 and S12 non-peptidase homologues; these either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. Beta-lactamase catalyses the opening and hydrolysis of the beta-lactam ring of beta-lactam antibiotics such as penicillins and cephalosporins []. There are four groups, classed A, B, C and D according to sequence, substrate specificity, and kinetic behaviour: class A (penicillinase-type) is the most common []. The genes for class A beta-lactamases are widely distributed in bacteria, frequently located on transmissible plasmids in Gram-negative organisms, although an equivalent chromosomal gene has been found in a few species []. Class A, C and D beta-lactamases are serine-utilising hydrolases - class B enzymes utilise a catalytic zinc centre instead. The 3 classes of serine beta-lactamase are evolutionarily related and belong to a superfamily that also includes DD-peptidases and other penicillin-binding proteins []. All these proteins contain an S-x-x-K motif, the Ser being the active site residue. Although clearly related, however, the sequences of the 3 classes of serine beta-lactamases vary considerably outside the active site. ; PDB: 1CI8_A 1CI9_B 1PW8_A 1PW1_A 1CEF_A 3PTE_A 1MPL_A 1PWG_A 1CEG_A 1IKG_A ....
Probab=100.00 E-value=2.8e-43 Score=390.18 Aligned_cols=244 Identities=28% Similarity=0.421 Sum_probs=195.5
Q ss_pred HHHHHHHhcccCccceeEEEEeecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCCccCchh
Q 002927 369 LRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 448 (864)
Q Consensus 369 l~~~l~~~~~~~~~~G~~v~v~~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~ 448 (864)
+++.+++.+++..+||++++|+++|+++++.++|+++...+.+++++|+|+++|+||+||++++++|+|+|+|+||+||+
T Consensus 1 ~~~~i~~~~~~~~~~g~a~~v~~~g~~~~~~~~G~~~~~~~~~~~~~t~~~i~SvsK~~ta~~v~~l~~~G~l~ld~~v~ 80 (329)
T PF00144_consen 1 IDRIIEQFMERYGIPGAAVAVIHNGKIVYEQYYGYADKQTGKPMTPDTVFRIGSVSKSFTATAVMQLIDEGKLDLDDPVS 80 (329)
T ss_dssp HHHHHHHHHHHTTESEEEEEEEETTEEEEEEEEEEEETTTTEEESTTSBEEEGGGHHHHHHHHHHHHHHTTSSGTTSBGG
T ss_pred ChHHHHHHHHhCCCcEEEEEEEECCEEEEEEEEeecccccCCCCCccceeeccCCcceeehhhhhhhhccccccccCccc
Confidence 46788888888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCccCCCCccCHHhHhcCCCCCCCCCCCccCCCCcCCCCHHHHHHHHHccCCCCCCCCceecccCcHHHHHHHHHH
Q 002927 449 NIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIE 528 (864)
Q Consensus 449 ~ylP~~~~~~~~~ITir~LLtHtSGl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pg~~~~Ysn~~~~~lLg~iie 528 (864)
+|||++.....++|||+|||+||||++............ ...+++++.+...++.++||+.|.|||.+|. |||.|||
T Consensus 81 ~ylp~~~~~~~~~iTi~~LL~htSGl~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~pg~~~~Ysn~~~~-ll~~ile 157 (329)
T PF00144_consen 81 KYLPEFPDPGKEKITIRDLLTHTSGLPDYEASDELFGDK--PFWDELLQYLANLPLNFPPGTQFAYSNTNYQ-LLGEILE 157 (329)
T ss_dssp GTTTTGTTCGGTTEBHHHHHTTHSSHSSSSHTTTHTSHH--HHHHHHHHHHHHSCSSSSTTSEEE--HHHHH-HHHHHHH
T ss_pred ccccccccccccCcccceeceeecCCCcccccccccccc--cchhHHHhhhhcccccccccccccccCcchh-hhhHHHH
Confidence 999988777778899999999999999874332211100 1126899999999999999999999999998 9999999
Q ss_pred HHhCCCHHHHHHHHhhhccCCCCccCCCCCCCccccccceeccCCcccccccCCCCCCCCCCCCCCcchhhhhhcccccc
Q 002927 529 RASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPAV 608 (864)
Q Consensus 529 ~vtG~~~~~~~~~~if~PLgm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 608 (864)
+++|++|.++++++||+||||++|.|. .+.......+..+.......... .
T Consensus 158 ~~tg~~~~~~~~~~i~~plgm~~t~~~-~~~~~~~~~~~~~~~~~~~~~~~----------------------------~ 208 (329)
T PF00144_consen 158 RVTGKSFEELLQENIFQPLGMKHTGFG-PPDAWPPRDAIGYYGNGDQASSP----------------------------P 208 (329)
T ss_dssp HHHTSHHHHHHHHHTTTTTTSTTEESS-BGGGGGGGBEEEEEETTEEECEE----------------------------S
T ss_pred HhccchhHHHHHHHHHHHhhccccccc-ccccccccccccccccccccccc----------------------------c
Confidence 999999999999999999999998664 33333333343332222111110 0
Q ss_pred cccccccccccCCcceecCHHHHHHHHHHHHcCCCCCCC
Q 002927 609 FNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPP 647 (864)
Q Consensus 609 ~~~~~~~~~~~~agG~~sTa~Dlakf~~~ll~gg~l~~~ 647 (864)
........|+||+++|++||+||++++++++.+...
T Consensus 209 ---~~~~~~~~~aggl~st~~Dlak~~~~~~~~~~~~~~ 244 (329)
T PF00144_consen 209 ---GYNPNPYYGAGGLFSTARDLAKFGQLLLNGGLILSP 244 (329)
T ss_dssp ---CTTHHHHTTTTTEEECHHHHHHHHHHHHHTGGSSCH
T ss_pred ---ccccccccccCccchhhHHHHHHHHHHhCCCccchh
Confidence 000011118999999999999999888888776655
No 10
>COG1680 AmpC Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms]
Probab=100.00 E-value=1.2e-36 Score=345.51 Aligned_cols=235 Identities=30% Similarity=0.443 Sum_probs=176.2
Q ss_pred ceeEEEEeecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCCccCchhhhccc---CccCCC
Q 002927 383 LGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPE---FKSNGK 459 (864)
Q Consensus 383 ~G~~v~v~~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~~ylP~---~~~~~~ 459 (864)
+|++++++.+|++++.+.+|+++...+.+++++|+|+|+|+||+|||+++++|+|+|+|+|||||++|||+ .....
T Consensus 54 ~g~a~av~~~g~~~~~~~~g~~~~~~~~~~~~~t~f~i~S~TK~~ta~~i~~LveeG~l~lddpV~~ylP~~~~~~~~~- 132 (390)
T COG1680 54 PGLALAVVLDGKTVVAKGYGVADEGYGGPVTPPTVFRIASVTKSFTATLLGKLVEEGKLDLDDPVSKYLPEGKDPATGG- 132 (390)
T ss_pred CceEEEEEECCEEEEEeccccccccccCCCCCCceeeehhhhHHHHHHHHHHHHHcCCCCCCchHHHhCCCccCCcCCc-
Confidence 59999999999999989999999999999999999999999999999999999999999999999999996 22333
Q ss_pred CccCHHhHhcCCCCCCCCCCCccCCCCcCCCCHHHHHHHHHccC--CCCCCCCceecccCcHHHHHHHHHHHHhCCCHHH
Q 002927 460 DLIKVHHVLNHTSGLHNVSVDLSSENPLLICDWDECLNRIALSA--PETEPGQEQLYHYLSFGWLCGGIIERASGKKFQE 537 (864)
Q Consensus 460 ~~ITir~LLtHtSGl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~pg~~~~Ysn~~~~~lLg~iie~vtG~~~~~ 537 (864)
.+|||+|||+||||++...............+.+...+.+...+ ...+||+.+.|||.+|. +||.|||+++|++|++
T Consensus 133 ~~iTi~~LL~htSGl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pG~~~~Ysn~~~~-lLg~ive~v~G~~~~~ 211 (390)
T COG1680 133 APITLRDLLTHTSGLPFPEDYAYAVPKRLVQDQEAALEYLASLPPELAPPPGTAFAYSNSNYG-LLGAILERVTGKPLEE 211 (390)
T ss_pred cceeHHHhhhcccCCCCcccccccccchhhhhHHHHHHHHHhccccccCCCCcceeeecccHH-HHHHHHHHhcCCCHHH
Confidence 58999999999999998222111111122233445556777776 46777999999999999 9999999999999999
Q ss_pred HHHHHhhhccCCCCccCCCCCCCccccccceeccCCcccccccCCCCCCCCCCCCCCcchhhhhhccccccccccccccc
Q 002927 538 ILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPAVFNMLNIRRA 617 (864)
Q Consensus 538 ~~~~~if~PLgm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (864)
+++++||+||||++|.+. .++....+.+.......... .....| ....+...
T Consensus 212 ~~~~~i~~PLGm~~t~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~------------------------~~~~~~~~ 263 (390)
T COG1680 212 LLRERIFEPLGMTSTGFG-PPPAPQARLAAGLAPAVGGG---GEVDDP------------------------GTFGLGSA 263 (390)
T ss_pred HHHHHhhcccCCCccccc-cChhhhcccccccccccccC---CccccC------------------------cccccccc
Confidence 999999999999998654 33333333322210000000 000000 00111112
Q ss_pred ccCCcceecCHHHHHHHHHHHHcCCCCCCC
Q 002927 618 IIPAANGHCSARALARYYAALADGGVVPPP 647 (864)
Q Consensus 618 ~~~agG~~sTa~Dlakf~~~ll~gg~l~~~ 647 (864)
..++||+++|++||++|++++++++.+.+.
T Consensus 264 ~~~~~gl~~t~~d~~~~~~~~l~~~~~~~~ 293 (390)
T COG1680 264 LAGAGGLFSTARDMARFGQALLNGGVLLGR 293 (390)
T ss_pred CCCCCceecccchHHHHHHHHhcCCCccch
Confidence 346799999999999999999999865554
No 11
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=100.00 E-value=2.5e-33 Score=298.11 Aligned_cols=312 Identities=20% Similarity=0.245 Sum_probs=252.0
Q ss_pred CccccccccccccccccceeeEEEEec-------C---------CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhC-
Q 002927 1 MGGMFMDFVETPLATASIAQVHRATLV-------D---------GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAE- 63 (864)
Q Consensus 1 ~~~~F~~fd~~plasaSigqV~~A~l~-------~---------G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~- 63 (864)
++|+|.+|++.|||+|+|+|||+|+++ + .+.|||||.+|+++++++.|+.+|+..++...+..
T Consensus 185 ~~eiF~efn~~PIGsG~IAQVY~atl~~a~lekd~~~~~~~~~~tq~~AiKv~Hp~V~~~ir~Dl~Il~f~Akl~~~vP~ 264 (565)
T KOG1236|consen 185 IEEIFSEFNREPIGSGCIAQVYRATLKTAYLEKDSGKEYVQKLGTQSCAIKVLHPNVEKQIRLDLGILGFGAKLINNVPD 264 (565)
T ss_pred HHHHHHhcCCcccccchhhhhhhhhhhHHHhhcccchhhhcCCccceeeeeccCccHHHHHHHHHHHHhhhhhhhhhcCc
Confidence 468999999999999999999999963 1 25799999999999999999999999988888653
Q ss_pred -CCCChHHHHHHHHHHhHhhccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--cCCceEEEeecCCcC
Q 002927 64 -PQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIR 140 (864)
Q Consensus 64 -~~~~~~~~~~e~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLvmE~i~G~~ 140 (864)
.-+++...++.|.-.+..++|.++||.|+.+|..||. +...+.+|+++. .++.||+-+|.+|.+
T Consensus 265 l~wL~l~~~vkqF~v~ln~QvdL~~EA~hL~rF~~NF~-------------~s~~V~fP~P~~~~~~~~vl~E~~~~Gl~ 331 (565)
T KOG1236|consen 265 LSWLSLPLEVKQFSVGLNAQVDLRQEALHLPRFTNNFS-------------GSKKVLFPKPIAPLHTDLVLVETYERGLS 331 (565)
T ss_pred cccccCcchHHHHHHHHHhhcchhhhhhhhHHHHHhcc-------------cceeecCCcccccccccceeeeecccccc
Confidence 3467888899999999999999999999999999986 455788999986 899999999999999
Q ss_pred CCChHHHhhcCC-CHHHHHHHHHHHHHHHHHhcCeeccCCCCCCeEEccCCC----------------------------
Q 002927 141 LNDCESLEAFGV-NKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPP---------------------------- 191 (864)
Q Consensus 141 L~~~~~~~~~~~-~~~~l~~~~~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~---------------------------- 191 (864)
+....+...... -.++++...++++++|++.++|+|+|+|||||+++..++
T Consensus 332 v~~~v~~~~~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf~~t~~~~~~~~~~e~~~~i~~~L~~~~~e~~ 411 (565)
T KOG1236|consen 332 VLRFVKWKSQPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRFNKTEDNLRGVHKAEKASAIKRGLEWFRSEVR 411 (565)
T ss_pred HHhhhhcccChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEEecCCCccccccccchhhhHHhhhhhhhhhhhh
Confidence 998865332211 245778888899999999999999999999999975433
Q ss_pred -------------CceEEEecccccccChHHHHHHHHHHHHHHhCCHHHHHHHHHHcCCCcCC-CcHHHHHHHHHHHHhc
Q 002927 192 -------------HRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRLRL-DVPEQAMEVSTLFFRT 257 (864)
Q Consensus 192 -------------g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~G~~~~~-~~~~~~~~~~~~~~~~ 257 (864)
-+++++|-|++..+++..+.++..++.|+++.|...+.+.+.+....... |...++..+..++...
T Consensus 412 d~~~~~~~~~~~~P~lvflDtGiv~kLs~qn~~N~l~lF~av~~~~Gy~ag~lml~~Sr~q~~~d~e~F~~kvEklv~~~ 491 (565)
T KOG1236|consen 412 DARFTDSPDLEYEPTLVFLDTGIVTKLSHQNQMNLLSLFRAVARFDGYDAGELMLERSRQQQCIDPERFARKVEKLVLKA 491 (565)
T ss_pred hhhhhccccccCCCeEEEecchhhhccChhhHHHHHHHHHHHHHhcchhHHHHHHhhcccccCCCHHHHHHHHHHHHHHh
Confidence 36899999999999999999999999999999999999999998876444 5556676776655442
Q ss_pred cCChhhHHHHHHHHHHHHHhhHHHHHHHHHhhHHHHhhcCCCCCCCchhHHHHHHHHHHHHhhhccCccceeeccccchH
Q 002927 258 SAPANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNPVDAFPGDIVIFSRVLNLLRGLSSTMNVRIVYLDIMRPFA 337 (864)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~R~~~~leg~~~~L~p~~~~~~~~~p~~ 337 (864)
... .......+...+.|.+.+ ++.|+ +++.++|..++-+++++||.+++|||+.|......+++
T Consensus 492 ~st----------~sl~tl~i~~ll~em~tm----vreH~--V~ids~f~tvvlsilvlEG~gRqLdP~lDl~~~~~~~l 555 (565)
T KOG1236|consen 492 RST----------KSLRTLNIGDLLSEMFTM----VREHH--VRIDSNFTTVVLSILVLEGFGRQLDPDLDLFQLRTFLL 555 (565)
T ss_pred hhh----------cccCcCcHHHHHHHHHHH----HHHhh--eeeccchHHHHHHHHHHhhhccccCCCcchhhhHHHHH
Confidence 210 000111233344555555 34444 79999999999999999999999999999998555555
Q ss_pred HHHH
Q 002927 338 EYVL 341 (864)
Q Consensus 338 ~~~L 341 (864)
...+
T Consensus 556 ~~~w 559 (565)
T KOG1236|consen 556 NVAW 559 (565)
T ss_pred HHHH
Confidence 5443
No 12
>KOG1234 consensus ABC (ATP binding cassette) 1 protein [General function prediction only]
Probab=99.98 E-value=6e-33 Score=280.82 Aligned_cols=307 Identities=21% Similarity=0.297 Sum_probs=247.8
Q ss_pred ccccccccccccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHh
Q 002927 2 GGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPK 81 (864)
Q Consensus 2 ~~~F~~fd~~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~ 81 (864)
.+.|++||+.|.|+|||||||+|++++|.+||||||+||+.+.+..|+..+.+++..-..+...+-++.+++..++.+..
T Consensus 46 ~~Kf~~fd~~P~AaASIGQVHrArl~~g~eVavKiQYPGva~sI~SD~~nl~~lLn~s~llPkGLFLd~~i~~ArkEL~~ 125 (363)
T KOG1234|consen 46 AQKFSSFDDGPFAAASIGQVHRARLADGPEVAVKIQYPGVARSIDSDANNLSRLLNFSGLLPKGLFLDVLIEVARKELKW 125 (363)
T ss_pred HHHHHhhccCccccccHHHHHHHHhcCCCeeeeecCCCchhhhccCcHHHHHHHHhhcccccccccHHHHHHHHHHhccc
Confidence 46799999999999999999999999999999999999999999999999998887766666678889999999999999
Q ss_pred hccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHH
Q 002927 82 ELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVE 159 (864)
Q Consensus 82 Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~ 159 (864)
|.||.+||+...+|+..+. +++.++||.|+. |+.+||+||++.|.+|.....+. +..++.+..
T Consensus 126 ECDYqrEA~~~~kFr~LLs-------------~~p~f~VP~Vv~Elct~rvlt~el~~G~pid~~~~~s--Q~~rn~i~~ 190 (363)
T KOG1234|consen 126 ECDYQREAASALKFRPLLS-------------DDPNFYVPRVVDELCTVRVLTLELGQGLPIDKTAKLS--QETRNYIGY 190 (363)
T ss_pred ccchHHHHHHHhhhHHHhc-------------CCCCcchhHHHHhhccchhhhhhhhcCccchhhhccc--HHHHHHHHH
Confidence 9999999999999999765 688899999996 99999999999999998864432 345788999
Q ss_pred HHHHHHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHHHHHHHHHHHHHhCCHHHHHHHHHHcCCCc
Q 002927 160 EITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRL 239 (864)
Q Consensus 160 ~~~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~G~~~ 239 (864)
.++..+++.|++..|+.-||.-+|++++.. ..+|.|+|||.++....++...|++++.|+..+|.+.+.+..++||+..
T Consensus 191 ~~l~lcLrEif~f~fMQTDPNWsNFly~~~-tk~i~LlDFGAsr~y~~~F~d~Y~~~~~aaa~~dr~~v~e~S~~lgfLt 269 (363)
T KOG1234|consen 191 KLLELCLREIFEFRFMQTDPNWSNFLYNGR-TKKIELLDFGASREYGEKFIDKYIRLLKAAADRDREGVIEMSRELGFLT 269 (363)
T ss_pred HHHHHHHHHHHHHhhhcCCCCHHHhccCCC-cceEEEEeccccccccHHHHHHHHHHHHHHHhcchHHHHHHHHHhcccc
Confidence 999999999999999999999999999865 4789999999999999999999999999999999999999999999963
Q ss_pred CCCcHHHHHHHHHHHHhccCChhhHHHHHHHHHHHHHhhHHHHHHHHHhhHHHHhhcCCCCCCCchhHHHHHHHHHHHHh
Q 002927 240 RLDVPEQAMEVSTLFFRTSAPANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNPVDAFPGDIVIFSRVLNLLRGL 319 (864)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~R~~~~leg~ 319 (864)
..... .+.+...++.+...|.++.-..+.+....+..+++..+..+.++ + ....|.|...+.|.+....=+
T Consensus 270 g~Es~----~m~DAHv~sv~ilgepfa~~~pydF~~q~~t~ri~~lipvmL~h----R-L~pPPeEtYsLHRklsG~fL~ 340 (363)
T KOG1234|consen 270 GYESK----VMEDAHVESVMILGEPFASDGPYDFGDQTVTDRIQNLIPVMLRH----R-LCPPPEETYSLHRKLSGAFLL 340 (363)
T ss_pred cchHH----HHHHHhhhHhhhccccccCCCCcCcCccHHHHHHHhhhHHHHhc----c-CCCCcHHHHHHHHHhhhHHHH
Confidence 21111 11111111111111111111223333344455666666654333 2 245788888999999999999
Q ss_pred hhccCccceeeccc
Q 002927 320 SSTMNVRIVYLDIM 333 (864)
Q Consensus 320 ~~~L~p~~~~~~~~ 333 (864)
|.+|++.+...+..
T Consensus 341 cakl~A~v~C~~lf 354 (363)
T KOG1234|consen 341 CAKLGATVPCRDLF 354 (363)
T ss_pred HHHhcCCCcHHHHH
Confidence 99999999776554
No 13
>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.
Probab=99.91 E-value=6e-25 Score=205.35 Aligned_cols=111 Identities=39% Similarity=0.562 Sum_probs=104.5
Q ss_pred CccccccccccccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCC--CChHHHHHHHHHH
Q 002927 1 MGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQ--YDFNPIIDEWCKE 78 (864)
Q Consensus 1 ~~~~F~~fd~~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~--~~~~~~~~e~~~~ 78 (864)
++++|++||++|||||||||||+|++++|++||||||||++++.+..|+++++.+++++.+..+. +++..+++++.+.
T Consensus 7 ~~~~F~~fd~~PlasASiaQVh~a~l~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 86 (119)
T PF03109_consen 7 IDEIFDEFDPEPLASASIAQVHRARLKDGEEVAVKVQRPGIEEQIEADLRILRRLARLLERLPPFRRLDLEEIVDEFRDS 86 (119)
T ss_pred HHHHHHHCCcchhhheehhhheeeeecccchhhhhhcchHHHHHHHHHHHHHHHHHHHHHHcccccccCHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999987655 8999999999999
Q ss_pred hHhhccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE
Q 002927 79 APKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI 124 (864)
Q Consensus 79 ~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~ 124 (864)
+.+|+||.+||+|+++|+++|. +.+.+.||+||
T Consensus 87 l~~ElDf~~Ea~n~~~~~~~~~-------------~~~~v~vP~vy 119 (119)
T PF03109_consen 87 LLEELDFRREAANLERFRKNFA-------------DSPRVYVPKVY 119 (119)
T ss_pred HHHHhCHHHHHHHHHHHHHHhC-------------CCCCEecCCCC
Confidence 9999999999999999999986 45789999986
No 14
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.83 E-value=2.7e-20 Score=189.86 Aligned_cols=182 Identities=18% Similarity=0.222 Sum_probs=120.6
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
.+||+||+|+||+|++.+|+.||||+.+++.... ..+.+.+...... .......+...++.+ .+.+|.+
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---------~~~~E~~ 71 (190)
T cd05145 3 GCISTGKEANVYHARTGDGEELAVKIYKTSTLSF-KDRDKYIEGDPRF-RSRYSKSNPRKLVFA---------WAEKEFR 71 (190)
T ss_pred ceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceE-eeHHHHhcCCccc-ccccccCCHHHHHHH---------HHHHHHH
Confidence 6899999999999998789999999999985421 1111111000000 000000122222222 1346889
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHH---HHHHHHHHHHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQK---VVEEITRAYAH 167 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~---l~~~~~~~~l~ 167 (864)
++.++.+ +.+.+|.++.....+|||||++|..+... .+.....+... ++..++.. +.
T Consensus 72 ~l~~l~~------------------~~i~~p~~~~~~~~~lVmE~~~g~~~~~~-~l~~~~~~~~~~~~i~~~l~~~-l~ 131 (190)
T cd05145 72 NLKRLYE------------------AGVPVPEPILLKKNVLVMEFIGDDGSPAP-RLKDVPLEEEEAEELYEQVVEQ-MR 131 (190)
T ss_pred HHHHHHh------------------CCCCCceEEEecCCEEEEEEecCCCchhh-hhhhccCCHHHHHHHHHHHHHH-HH
Confidence 9998865 24667888776677999999999865432 12333444433 34444433 66
Q ss_pred HHHh-cCeeccCCCCCCeEEccCCCCceEEEecccccccChHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 002927 168 QIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFA 233 (864)
Q Consensus 168 ~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~ 233 (864)
++|. .||+||||||+||+++ + ++++|+|||+++.++.. ...+++++|++.+...+.
T Consensus 132 ~lH~~~givHrDlkP~NIll~-~--~~~~liDFG~a~~~~~~-------~~~~~~~~~~~~~~~~~~ 188 (190)
T cd05145 132 RLYQEAGLVHGDLSEYNILYH-D--GKPYIIDVSQAVELDHP-------NALEFLRRDIRNINRFFR 188 (190)
T ss_pred HHHHhCCEecCCCChhhEEEE-C--CCEEEEEcccceecCCC-------CHHHHHHHHHHHHHHHhh
Confidence 7788 9999999999999998 4 79999999999998764 345567888888877664
No 15
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.82 E-value=9.7e-20 Score=185.50 Aligned_cols=183 Identities=16% Similarity=0.174 Sum_probs=119.8
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
..||+||+|+||+|+.++|+.||||+.+++.......| ..+....+ +.......++..++.++. ..|.+
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~---------~~E~~ 71 (190)
T cd05147 3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRD-RYVSGEFR-FRHGYCKSNPRKMVRTWA---------EKEMR 71 (190)
T ss_pred CccccccceEEEEEECCCCCEEEEEEEEecccccccHH-HhhcCCch-hhccccCCCHHHHHHHHH---------HHHHH
Confidence 57999999999999988999999999998754322211 11100000 000011233333333322 35888
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHH--HHHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA--YAHQ 168 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~--~l~~ 168 (864)
++.++.+. .+.+|.++.....+|||||++|..+.... +....++...+...+.++ .+.+
T Consensus 72 ~l~~l~~~------------------~v~~p~~~~~~~~~iVmE~i~g~~l~~~~-~~~~~~~~~~~~~i~~qi~~~L~~ 132 (190)
T cd05147 72 NLKRLVTA------------------GIPCPEPILLKSHVLVMEFIGDDGWAAPR-LKDAPLSESKARELYLQVIQIMRI 132 (190)
T ss_pred HHHHHHHC------------------CCCCCcEEEecCCEEEEEEeCCCCCcchh-hhcCCCCHHHHHHHHHHHHHHHHH
Confidence 99988652 33456666666679999999997665432 233456666666666553 3777
Q ss_pred H-HhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 002927 169 I-YVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFA 233 (864)
Q Consensus 169 i-~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~ 233 (864)
+ |..|++||||||+|||++. ++++|||||++.......- ..++.+|.+.+.+.++
T Consensus 133 l~H~~giiHrDlkP~NIli~~---~~v~LiDFG~a~~~~~~~~-------~~~~~~d~~~~~~~f~ 188 (190)
T cd05147 133 LYQDCRLVHADLSEYNLLYHD---GKLYIIDVSQSVEHDHPHA-------LEFLRMDCVNVNDFFR 188 (190)
T ss_pred HHHhCCcccCCCCHHHEEEEC---CcEEEEEccccccCCCcCH-------HHHHHHHHHHHHHHhc
Confidence 7 6999999999999999973 6899999999986644332 2345667666666553
No 16
>smart00090 RIO RIO-like kinase.
Probab=99.74 E-value=1.9e-17 Score=174.41 Aligned_cols=185 Identities=20% Similarity=0.265 Sum_probs=126.5
Q ss_pred cccccccceeeEEEE--ecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 11 TPLATASIAQVHRAT--LVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 11 ~plasaSigqV~~A~--l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
++||+|++|+||+|+ .++|++||||+.+++.......+.. ............+.... .+..+.+|
T Consensus 34 ~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~---------~~~~~~~E 100 (237)
T smart00090 34 GCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRY----VDGDFRFKYRKINPRKL---------VRLWAEKE 100 (237)
T ss_pred CeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhh----cccchhhccCCCCHHHH---------HHHHHHHH
Confidence 689999999999998 4689999999998765321110000 00000000000111111 11235679
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHH---HHHHHHHHHH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQ---KVVEEITRAY 165 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~---~l~~~~~~~~ 165 (864)
++++.++.+. .+.+|+++.....+|||||++|.++..... .....+.. .++..++. .
T Consensus 101 ~~~L~~L~~~------------------~i~~p~~~~~~~~~lV~E~~~g~~L~~~~~-~~~~~~~~~~~~i~~qi~~-~ 160 (237)
T smart00090 101 FRNLQRLYEA------------------GVPVPKPIAWRRNVLVMEFIGGDGLPAPRL-KDVEPEEEEEFELYDDILE-E 160 (237)
T ss_pred HHHHHHHHhc------------------CCCCCeeeEecCceEEEEEecCCccccccc-ccCCcchHHHHHHHHHHHH-H
Confidence 9999998652 356788887667799999999988866431 12222322 34444443 3
Q ss_pred HHHHHhcC-eeccCCCCCCeEEccCCCCceEEEecccccccChHHHHHHHHHHHHHHhCCHHHHHHHHHHcCCC
Q 002927 166 AHQIYVDG-FFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLR 238 (864)
Q Consensus 166 l~~i~~~G-~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~G~~ 238 (864)
+.++|..| ++|+|+||+||+++ + ++++|+|||++.......+ .+++++|.+.+...+.++|..
T Consensus 161 l~~LH~~g~iiH~Dikp~NIli~-~--~~i~LiDFg~a~~~~~~~~-------~~~~~~d~~~~~~~~~~~~~~ 224 (237)
T smart00090 161 MRKLYKEGELVHGDLSEYNILVH-D--GKVVIIDVSQSVELDHPMA-------LEFLERDIRNIIRFFRRKGVD 224 (237)
T ss_pred HHHHHhcCCEEeCCCChhhEEEE-C--CCEEEEEChhhhccCCcch-------HHHHHHHHHHHHHHHHHcCCC
Confidence 78899999 99999999999998 3 7899999999998777554 456899999999999999984
No 17
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.70 E-value=5.9e-17 Score=173.56 Aligned_cols=144 Identities=17% Similarity=0.215 Sum_probs=95.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+-||+||||.||+|+++ +|..||||-.... .+..+..+.+..|+.+..|.
T Consensus 16 ~~iG~GsfavVykg~h~~~~~~VAIK~i~~~-----------------------------~l~~k~~e~L~~Ei~iLkel 66 (429)
T KOG0595|consen 16 REIGSGSFAVVYKGRHKKSGTEVAIKCIAKK-----------------------------KLNKKLVELLLSEIKILKEL 66 (429)
T ss_pred hhccCcceEEEEEeEeccCCceEEeeeehhh-----------------------------ccCHHHHHHHHHHHHHHHhc
Confidence 44999999999999987 7999999943211 11122223333444444443
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHH---HH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITR---AY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~---~~ 165 (864)
+ |. --|.+-+..+ .+..+||||||+|++|+++.... ..++ +..++...+ ..
T Consensus 67 ~------H~-----------------nIV~l~d~~~~~~~i~lVMEyC~gGDLs~yi~~~-~~l~-e~t~r~Fm~QLA~a 121 (429)
T KOG0595|consen 67 K------HP-----------------NIVRLLDCIEDDDFIYLVMEYCNGGDLSDYIRRR-GRLP-EATARHFMQQLASA 121 (429)
T ss_pred C------Cc-----------------ceeeEEEEEecCCeEEEEEEeCCCCCHHHHHHHc-CCCC-HHHHHHHHHHHHHH
Confidence 2 21 0133334444 56678999999999999986532 2333 333333222 33
Q ss_pred HHHHHhcCeeccCCCCCCeEEccC-CC---CceEEEecccccccChH
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKD-PP---HRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~-~~---g~i~LiDFG~~~~l~~~ 208 (864)
++.+|+.+|+||||||.|||+... .+ -.++|.|||+++.+.+.
T Consensus 122 lq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~ 168 (429)
T KOG0595|consen 122 LQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPG 168 (429)
T ss_pred HHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCch
Confidence 778899999999999999999864 12 35899999999999853
No 18
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.70 E-value=1.9e-16 Score=162.54 Aligned_cols=170 Identities=17% Similarity=0.259 Sum_probs=116.5
Q ss_pred ccccccccceeeEEEEecCCCEEEEEEecCChHHH--HHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHH
Q 002927 10 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTI--ILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 87 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~--~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~ 87 (864)
.++|++|++|+||+|..++|+.||||+.+++.... ...+.+.+. .-....... ..+..+..
T Consensus 20 ~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~------~~~~~~~~ 82 (198)
T cd05144 20 GNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLG-----------DRKHASWLY------LSRLAAQK 82 (198)
T ss_pred CCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHh-----------ccccchhHH------HhHHHHHH
Confidence 47899999999999998899999999987654211 110100000 000000001 12223556
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHHHH
Q 002927 88 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAH 167 (864)
Q Consensus 88 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~l~ 167 (864)
|...+..+.+. .+.+|+++.....++||||++|.+|.+.... .....++..++.. +.
T Consensus 83 E~~~l~~l~~~------------------~i~v~~~~~~~~~~lv~e~~~g~~L~~~~~~----~~~~~~~~~i~~~-l~ 139 (198)
T cd05144 83 EFAALKALYEE------------------GFPVPKPIDWNRHAVVMEYIDGVELYRVRVL----EDPEEVLDEILEE-IV 139 (198)
T ss_pred HHHHHHHHHHc------------------CCCCCceeecCCceEEEEEeCCcchhhcccc----ccHHHHHHHHHHH-HH
Confidence 77777776441 2456777776677999999999998775321 2345566666554 46
Q ss_pred HHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHHHHH----HHHHHHHH
Q 002927 168 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQAL----AKMFFAAA 221 (864)
Q Consensus 168 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~----~~l~~a~~ 221 (864)
++|..|++|+|+||+||+++.+ ++++|+|||++..++.+.+..+ ...++++.
T Consensus 140 ~lh~~gi~H~Dl~p~Nill~~~--~~~~liDfg~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (198)
T cd05144 140 KAYKHGIIHGDLSEFNILVDDD--EKIYIIDWPQMVSTDHPNAEELLDRDVENILRFF 195 (198)
T ss_pred HHHHCCCCcCCCCcccEEEcCC--CcEEEEECCccccCCCccHHHHHHHHHHHHHHHH
Confidence 7899999999999999999864 8999999999999999888887 55555544
No 19
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.67 E-value=9.9e-16 Score=155.46 Aligned_cols=165 Identities=22% Similarity=0.295 Sum_probs=107.8
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
++|++|++|+||+|+..+|++||||+.+++.......+..++ .+.... ....++..+. +.....|.+
T Consensus 3 ~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~---------~~~~~~e~~ 69 (187)
T cd05119 3 GPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRT---GDYRFG-RKKSNWRYLS---------RLWAEKEFR 69 (187)
T ss_pred cccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhH---HHHHhc-cCCcchhhhh---------hHHHHHHHH
Confidence 579999999999999878999999999886543322221110 000000 0011111111 112334666
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCc-----CCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGI-----RLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~-----~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
++.++... .+.+|+++.+...+|+|||++|. .+.+... ......++..++..
T Consensus 70 ~l~~l~~~------------------~~~~~~~~~~~~~~lv~e~~~g~~~~~~~l~~~~~----~~~~~~~~~~~~~~- 126 (187)
T cd05119 70 NLKRLYEA------------------GVPVPKPIDLNRHVLVMEFIGGDGIPAPRLKDVRL----LEDPEELYDQILEL- 126 (187)
T ss_pred HHHHHHHc------------------CCCCCceEecCCCEEEEEEeCCCCccChhhhhhhh----cccHHHHHHHHHHH-
Confidence 66666542 35678888777889999999994 3433211 02334455544444
Q ss_pred HHHHHh-cCeeccCCCCCCeEEccCCCCceEEEecccccccChHHHHHHH
Q 002927 166 AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALA 214 (864)
Q Consensus 166 l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~ 214 (864)
+..+|. .|++|+|+||+||+++ + +.++|+|||++.....+.+..+.
T Consensus 127 l~~lh~~~~ivH~Dl~p~Nili~-~--~~~~liDfg~a~~~~~~~~~~~~ 173 (187)
T cd05119 127 MRKLYREAGLVHGDLSEYNILVD-D--GKVYIIDVPQAVEIDHPNAEEFL 173 (187)
T ss_pred HHHHhhccCcCcCCCChhhEEEE-C--CcEEEEECcccccccCcchHHHH
Confidence 667888 9999999999999998 4 78999999999988886666654
No 20
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=99.66 E-value=3.8e-16 Score=172.46 Aligned_cols=147 Identities=18% Similarity=0.221 Sum_probs=99.8
Q ss_pred ccccc-cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhc
Q 002927 6 MDFVE-TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 83 (864)
Q Consensus 6 ~~fd~-~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~El 83 (864)
++|+. ++||.|.||+||.|+-+ +|+.+|+|+++.. ++--+. --+.+..|-
T Consensus 141 ~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS-------~M~~~~---------------------Qv~hV~aER 192 (550)
T KOG0605|consen 141 DDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKS-------EMLKKN---------------------QVEHVRAER 192 (550)
T ss_pred ccchhheeeccccceeEEEEEEccCCcEEeeecccHH-------HHHhhh---------------------hHHHHHHHH
Confidence 45664 89999999999999977 7999999987631 110000 001122222
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcC-CCHHHHH
Q 002927 84 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFG-VNKQKVV 158 (864)
Q Consensus 84 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~-~~~~~l~ 158 (864)
|...|+ + .-.|-++|+ ....||||||++|+++..++. ..+ +.....-
T Consensus 193 diL~~~------------------------d--s~~vVKLyYsFQD~~~LYLiMEylPGGD~mTLL~--~~~~L~e~~ar 244 (550)
T KOG0605|consen 193 DILAEV------------------------D--SPWVVKLYYSFQDKEYLYLIMEYLPGGDMMTLLM--RKDTLTEDWAR 244 (550)
T ss_pred HHhhhc------------------------C--CCcEEEEEEEecCCCeeEEEEEecCCccHHHHHH--hcCcCchHHHH
Confidence 222221 1 223456665 456789999999999887743 333 3333333
Q ss_pred HHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHH
Q 002927 159 EEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMK 210 (864)
Q Consensus 159 ~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r 210 (864)
-.+++.+ +..||++|++||||||.|+||+.. |.|+|.|||++.-+....+
T Consensus 245 fYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~--GHiKLSDFGLs~gl~~~~~ 296 (550)
T KOG0605|consen 245 FYIAETVLAIESIHQLGYIHRDIKPDNLLIDAK--GHIKLSDFGLSTGLDKKHR 296 (550)
T ss_pred HHHHHHHHHHHHHHHcCcccccCChhheeecCC--CCEeeccccccchhhhhhh
Confidence 3344443 788999999999999999999976 9999999999987776655
No 21
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.65 E-value=8.9e-16 Score=158.88 Aligned_cols=141 Identities=21% Similarity=0.306 Sum_probs=99.6
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.++.|.+|+||.+.. +++.||||+.+|..... +.. ...+...=-|.+|++
T Consensus 37 ~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~---~~~-------------------------~~~f~~g~~~e~Ea~ 87 (232)
T PRK10359 37 KVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRT---ERF-------------------------LKSFVKGDYYENLIV 87 (232)
T ss_pred EEecCCCceEEEEEec-CCCcEEEEEechhcCch---HHH-------------------------HHhhhhhHHHHHHHH
Confidence 6899999999999765 67899999998876432 000 000111112678999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----------cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEE 160 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~ 160 (864)
++.++.+. ++..|..+. ++..+|+|||++|.+|.++... + +.....
T Consensus 88 ~l~rL~~~------------------GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~~-----~-~~~~~~ 143 (232)
T PRK10359 88 QTDRVRSE------------------GLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPEI-----S-EDVKAK 143 (232)
T ss_pred HHHHHHHC------------------CCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhhc-----c-HHHHHH
Confidence 99998652 233333321 4578999999999999876321 2 233333
Q ss_pred HHHHHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 161 ITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 161 ~~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+ ...+.++|..|++||||||+||+++++ | ++|+|||++.....+
T Consensus 144 i-~~~l~~lH~~gi~H~Dikp~Nili~~~--g-i~liDfg~~~~~~e~ 187 (232)
T PRK10359 144 I-KASIESLHQHGMVSGDPHKGNFIVSKN--G-LRIIDLSGKRCTAQR 187 (232)
T ss_pred H-HHHHHHHHHcCCccCCCChHHEEEeCC--C-EEEEECCCcccccch
Confidence 3 335889999999999999999999865 6 999999999877543
No 22
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=99.64 E-value=9.8e-16 Score=157.93 Aligned_cols=154 Identities=19% Similarity=0.264 Sum_probs=103.8
Q ss_pred cccccccccccccceeeEEEEec-CCCEEEEEEec-----CChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHH
Q 002927 5 FMDFVETPLATASIAQVHRATLV-DGRQVVVKVQH-----QGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKE 78 (864)
Q Consensus 5 F~~fd~~plasaSigqV~~A~l~-~G~~VAVKv~~-----p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~ 78 (864)
|+.+. -+|.||+|.|++++.+ +|+.||||.-. |.+.+..-++++.|+.+- +-
T Consensus 4 YE~Lg--kvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLk--------H~------------ 61 (396)
T KOG0593|consen 4 YEKLG--KVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLK--------HE------------ 61 (396)
T ss_pred Hhhhh--ccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcc--------cc------------
Confidence 44443 4999999999999988 79999999643 333333333333222211 11
Q ss_pred hHhhccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHH
Q 002927 79 APKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVV 158 (864)
Q Consensus 79 ~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~ 158 (864)
|+..+-+-|++ ..+..||.|||+-.-|.+++. -..|.+.+.+-
T Consensus 62 ------------NLVnLiEVFrr------------------------krklhLVFE~~dhTvL~eLe~-~p~G~~~~~vk 104 (396)
T KOG0593|consen 62 ------------NLVNLIEVFRR------------------------KRKLHLVFEYCDHTVLHELER-YPNGVPSELVK 104 (396)
T ss_pred ------------hHHHHHHHHHh------------------------cceeEEEeeecchHHHHHHHh-ccCCCCHHHHH
Confidence 22222222221 233469999999766665543 34577877777
Q ss_pred HHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh---HHHHHHHHHHHH
Q 002927 159 EEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS---SMKQALAKMFFA 219 (864)
Q Consensus 159 ~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~---~~r~~~~~l~~a 219 (864)
..+.+.+ +..+|.++++|||+||+||||+.. |.++|+|||.++.++. .-.+.++.-||.
T Consensus 105 ~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~--gvvKLCDFGFAR~L~~pgd~YTDYVATRWYR 168 (396)
T KOG0593|consen 105 KYLYQLLKAIHFCHKNNCIHRDIKPENILITQN--GVVKLCDFGFARTLSAPGDNYTDYVATRWYR 168 (396)
T ss_pred HHHHHHHHHhhhhhhcCeecccCChhheEEecC--CcEEeccchhhHhhcCCcchhhhhhhhhhcc
Confidence 7666655 677799999999999999999975 8999999999999983 234455555654
No 23
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=99.62 E-value=8.9e-16 Score=163.32 Aligned_cols=141 Identities=19% Similarity=0.193 Sum_probs=98.9
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
.-||+|+-|.||+++++ +++.+|+|+.+-++.. ++++++.+|++..++.
T Consensus 85 ~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~------------------------------~~~~Qi~rEl~il~~~ 134 (364)
T KOG0581|consen 85 GVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDP------------------------------ALQKQILRELEILRSC 134 (364)
T ss_pred hhcccCCCcEEEEEEEcCCCeEEEEEeecccCCH------------------------------HHHHHHHHHHHHHhhC
Confidence 57999999999999987 8999999998544432 2334444555444433
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCC-CEEEeeEEe-cC-CceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH-
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEV-DVLIPEVIQ-SS-ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~-~v~vP~v~~-~~-~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~- 165 (864)
. .+ -|..-..+. .. ...|+|||++|++|+++.... ..+....++....+.+
T Consensus 135 ~------------------------spyIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~~-g~i~E~~L~~ia~~VL~ 189 (364)
T KOG0581|consen 135 Q------------------------SPYIVGFYGAFYSNGEEISICMEYMDGGSLDDILKRV-GRIPEPVLGKIARAVLR 189 (364)
T ss_pred C------------------------CCCeeeEeEEEEeCCceEEeehhhcCCCCHHHHHhhc-CCCCHHHHHHHHHHHHH
Confidence 1 11 122222222 34 378999999999999985421 3344444444444433
Q ss_pred -HHHHHh-cCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 166 -AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 -l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+.++|+ ++|+|||+||.||||+.. |+++|+|||.++.+...
T Consensus 190 GL~YLh~~~~IIHRDIKPsNlLvNsk--GeVKicDFGVS~~lvnS 232 (364)
T KOG0581|consen 190 GLSYLHEERKIIHRDIKPSNLLVNSK--GEVKICDFGVSGILVNS 232 (364)
T ss_pred HHHHHhhccCeeeccCCHHHeeeccC--CCEEeccccccHHhhhh
Confidence 778885 999999999999999975 99999999999988765
No 24
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.60 E-value=1.2e-15 Score=153.94 Aligned_cols=173 Identities=19% Similarity=0.290 Sum_probs=114.9
Q ss_pred eEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCC------CCChHHHHHHHHHHhHhhccHHHHHHHHHH
Q 002927 21 VHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEP------QYDFNPIIDEWCKEAPKELDFNSEAENTRI 94 (864)
Q Consensus 21 V~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~------~~~~~~~~~e~~~~~~~Eld~~~Ea~n~~~ 94 (864)
||.|...+|++||||+-|.+... +.. .......... ......+. .....+|++++.+
T Consensus 2 Vy~~~~~~~~~~a~K~~r~~~~~-Fk~-------~~~y~~~~~r~~~~~~~~~~~~~~---------~~~~~~E~~~L~~ 64 (188)
T PF01163_consen 2 VYHAIDPDGEEVAVKIYRTGRTS-FKR-------RKKYRDYDYRFKKYRHKSSWRYLI---------REWAKKEFRNLKR 64 (188)
T ss_dssp EEEEEECTTEEEEEEEE-S---S-S-H-------HHHHTTTSTTSTTC--G--CHHHH---------HHHHHHHHHHHHH
T ss_pred EEEEECCCCCEEEEEEeccCceE-EEE-------eeeeecccchhcccccccCHHHHH---------HHHHHHHHHHHHH
Confidence 89999889999999998876432 111 1111111100 01111222 2335668999888
Q ss_pred HHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecC--CcCCCChHHHhhcCCCHHHHHHHHHHHHHHHHHhc
Q 002927 95 VSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMD--GIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVD 172 (864)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~--G~~L~~~~~~~~~~~~~~~l~~~~~~~~l~~i~~~ 172 (864)
+.. .++.||+++..++.+||||||+ |.++..+........+...+...+++.+...+|..
T Consensus 65 l~~------------------~Gv~vP~p~~~~~~~ivME~I~~~G~~~~~l~~~~~~~~~~~~~~~~il~~~~~~~~~~ 126 (188)
T PF01163_consen 65 LYE------------------AGVPVPKPYDYNRNVIVMEYIGEDGVPLPRLKDVDLSPEEPKELLEEILEEIIKMLHKA 126 (188)
T ss_dssp CCC------------------TT-SS--EEEEETTEEEEE--EETTEEGGCHHHCGGGGSTHHHHHHHHHHHHHHHHHCT
T ss_pred HHH------------------CCccCCcEEEEeCCEEEEEecCCCccchhhHHhccccchhHHHHHHHHHHHHHHHHHhc
Confidence 643 3588999998889999999999 99998876544334567888888888888888999
Q ss_pred CeeccCCCCCCeEEccCCCCceEEEecccccccChHHHHHHHHHHHHHHhCCHHHHHHHHHHcCCC
Q 002927 173 GFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLR 238 (864)
Q Consensus 173 G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~G~~ 238 (864)
|++|+||++.||++.+ ++++|||||.+.....+.-. .++.+|.+.+.+.+...|..
T Consensus 127 givHGDLs~~NIlv~~---~~~~iIDf~qav~~~~p~a~-------~~l~RDi~ni~~fF~~~~~~ 182 (188)
T PF01163_consen 127 GIVHGDLSEYNILVDD---GKVYIIDFGQAVDSSHPNAE-------ELLRRDIENIIRFFKKKGVQ 182 (188)
T ss_dssp TEEESS-STTSEEEET---TCEEE--GTTEEETTSTTHH-------HHHHHHHHHHHHHHHCCC--
T ss_pred CceecCCChhhEEeec---ceEEEEecCcceecCCccHH-------HHHHHHHHHHHHHHHHhCCC
Confidence 9999999999999985 48999999999887754332 34678999999999998874
No 25
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=99.60 E-value=1.7e-15 Score=162.14 Aligned_cols=145 Identities=23% Similarity=0.308 Sum_probs=100.9
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+-||+|.||.|-.|..+ +|+.|||||.+...-..- +.....+.|..+|+
T Consensus 178 ~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~------------------------------s~~~~~~~~v~~Ei 227 (475)
T KOG0615|consen 178 KTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGC------------------------------SRAIAKTRDVQNEI 227 (475)
T ss_pred eeecCCceeEEEEEEEcccCcEEEeeeeehhhcccc------------------------------cccccchhhhHHHH
Confidence 67999999999999975 899999998763211100 00112344566788
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHH----HHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVV----EEITR 163 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~----~~~~~ 163 (864)
.-+.++.| |+ |.+-..+. ....||||||++|+.|-+... ..+.-++... .+++.
T Consensus 228 eILkkL~H------------------P~IV~~~d~f~~~ds~YmVlE~v~GGeLfd~vv--~nk~l~ed~~K~~f~Qll~ 287 (475)
T KOG0615|consen 228 EILKKLSH------------------PNIVRIKDFFEVPDSSYMVLEYVEGGELFDKVV--ANKYLREDLGKLLFKQLLT 287 (475)
T ss_pred HHHHhcCC------------------CCEEEEeeeeecCCceEEEEEEecCccHHHHHH--hccccccchhHHHHHHHHH
Confidence 88777644 23 33444454 445599999999999988643 3333333333 33333
Q ss_pred HHHHHHHhcCeeccCCCCCCeEEccC-CCCceEEEecccccccC
Q 002927 164 AYAHQIYVDGFFNGDPHPGNFLVSKD-PPHRPILLDFGLTKKLS 206 (864)
Q Consensus 164 ~~l~~i~~~G~~H~D~hPgNIlv~~~-~~g~i~LiDFG~~~~l~ 206 (864)
+ ++++|+.||.|||+||+|||+..+ .+..++|.|||+++...
T Consensus 288 a-vkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g 330 (475)
T KOG0615|consen 288 A-VKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSG 330 (475)
T ss_pred H-HHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhccc
Confidence 3 678899999999999999999854 34668999999998774
No 26
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.59 E-value=1.9e-15 Score=171.65 Aligned_cols=154 Identities=18% Similarity=0.265 Sum_probs=106.2
Q ss_pred cccccccccccccceeeEEEEec-CCCEEEEEEecC----ChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHh
Q 002927 5 FMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQ----GIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEA 79 (864)
Q Consensus 5 F~~fd~~plasaSigqV~~A~l~-~G~~VAVKv~~p----~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~ 79 (864)
+.++-.+-||.|++|+||+++.+ +|+.||||+-++ .-.+....++++++++-
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLn----------------------- 69 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLN----------------------- 69 (732)
T ss_pred cceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcC-----------------------
Confidence 34555678999999999999965 899999998654 22333333444333321
Q ss_pred HhhccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHH--hhcCCCHHH
Q 002927 80 PKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESL--EAFGVNKQK 156 (864)
Q Consensus 80 ~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~--~~~~~~~~~ 156 (864)
..|+.++.. .+.-..+ +. +...||+||||.|++|...+.. ...|+...+
T Consensus 70 ---------h~NIVk~f~-----------------iee~~~~--~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e 121 (732)
T KOG4250|consen 70 ---------HPNIVKLFD-----------------IEETKFL--GLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESE 121 (732)
T ss_pred ---------chhhhhhcc-----------------cCCcccc--CcccccceEEEeecCCCcHHHHhcCcccccCCCHHH
Confidence 112222111 0111111 11 5567999999999999887542 345777778
Q ss_pred HHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCce--EEEecccccccChHH
Q 002927 157 VVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRP--ILLDFGLTKKLSSSM 209 (864)
Q Consensus 157 l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i--~LiDFG~~~~l~~~~ 209 (864)
+...+.++. ++.+|++||+|||||||||++-...+|+. +|+|||+++.+++..
T Consensus 122 ~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s 178 (732)
T KOG4250|consen 122 FLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNS 178 (732)
T ss_pred HHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCC
Confidence 777776655 88999999999999999999876555664 699999999999865
No 27
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.57 E-value=4.9e-15 Score=148.26 Aligned_cols=138 Identities=22% Similarity=0.371 Sum_probs=101.0
Q ss_pred cccccccceeeEEEEe-cCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
++||+||||-+|.|.. .+|++||||+-+..... | .+..|+
T Consensus 21 rkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h--------------------p-------------------qL~yEs 61 (341)
T KOG1163|consen 21 RKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH--------------------P-------------------QLLYES 61 (341)
T ss_pred EeecCCchhheeeeeeccCCceEEEEeecccCCC--------------------c-------------------chhHHH
Confidence 6899999999999995 58999999986543321 1 133466
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+-.+.+++ .+-+|.+.+ ....||||+.+ |.+|+++.......+.-..++...-+.+
T Consensus 62 kvY~iL~~-------------------g~GiP~i~~y~~e~~ynvlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml 121 (341)
T KOG1163|consen 62 KVYRILQG-------------------GVGIPHIRHYGTEKDYNVLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQML 121 (341)
T ss_pred HHHHHhcc-------------------CCCCchhhhhccccccceeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHH
Confidence 66555544 466888875 34579999987 9999999776655555544443333333
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccC-CCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKD-PPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~-~~g~i~LiDFG~~~~l~~ 207 (864)
++.+|.++|+|||+||.|+|..-+ ...++.|||||+++..-+
T Consensus 122 ~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d 166 (341)
T KOG1163|consen 122 SRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRD 166 (341)
T ss_pred HHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhcc
Confidence 788999999999999999998532 125799999999987644
No 28
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.56 E-value=3.3e-15 Score=163.67 Aligned_cols=147 Identities=18% Similarity=0.293 Sum_probs=97.1
Q ss_pred ccccccccccccccceeeEEEEec-CCCEEEEEEec-----CChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHH
Q 002927 4 MFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQH-----QGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCK 77 (864)
Q Consensus 4 ~F~~fd~~plasaSigqV~~A~l~-~G~~VAVKv~~-----p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~ 77 (864)
.|+.+ +-||.|.|||||+|+.. +|+.||+|-.+ ++....+.+++.
T Consensus 118 ~feki--~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~--------------------------- 168 (560)
T KOG0600|consen 118 SFEKI--EKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIK--------------------------- 168 (560)
T ss_pred HHHHH--HHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHH---------------------------
Confidence 45555 45999999999999964 89999999655 333333333333
Q ss_pred HhHhhccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe---cCCceEEEeecCCcCCCChHHHhhc---
Q 002927 78 EAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAF--- 150 (864)
Q Consensus 78 ~~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~~~~--- 150 (864)
-++++.| ++ +.+-.+.. ++..|||.||++ .|+..+...
T Consensus 169 -------------ILr~l~H------------------pNIikL~eivt~~~~~siYlVFeYMd----hDL~GLl~~p~v 213 (560)
T KOG0600|consen 169 -------------ILRRLDH------------------PNIIKLEEIVTSKLSGSIYLVFEYMD----HDLSGLLSSPGV 213 (560)
T ss_pred -------------HHHhcCC------------------CcccceeeEEEecCCceEEEEEeccc----chhhhhhcCCCc
Confidence 3333322 11 22222322 567899999998 455433222
Q ss_pred CCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHHHHHHHH
Q 002927 151 GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKM 216 (864)
Q Consensus 151 ~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l 216 (864)
.+...++--.+-+++ +.++|..||+|||+|..||||+.+ |.++|.|||+++.++.+.+..|..-
T Consensus 214 kft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~--G~LKiaDFGLAr~y~~~~~~~~T~r 279 (560)
T KOG0600|consen 214 KFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNN--GVLKIADFGLARFYTPSGSAPYTSR 279 (560)
T ss_pred ccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCC--CCEEeccccceeeccCCCCcccccc
Confidence 233333333333333 778899999999999999999965 9999999999998887766654433
No 29
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.56 E-value=1.8e-14 Score=159.96 Aligned_cols=139 Identities=15% Similarity=0.237 Sum_probs=97.1
Q ss_pred ccccccccceeeEEEEec--CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHH
Q 002927 10 ETPLATASIAQVHRATLV--DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 87 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~--~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~ 87 (864)
.+.||+|+||+||+|+.+ +|+.||||+..+..... ..+ . ....|.+
T Consensus 23 ~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~-~~~-------------------------~------~~~~~~~ 70 (365)
T PRK09188 23 TAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWW-SKP-------------------------L------ARHLAAR 70 (365)
T ss_pred ccEEeecCcEEEEEEEEcCCCCeEEEEEEeccccccc-ccH-------------------------H------HHHHHHH
Confidence 367999999999999875 57888999765331100 000 0 0112566
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHHHH
Q 002927 88 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAH 167 (864)
Q Consensus 88 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~l~ 167 (864)
|++.+.++++ + -.+|.++.....+|||||++|.+|... .. .....++..+++ .+.
T Consensus 71 E~~iL~~L~h------------------~-~iv~~l~~~~~~~LVmE~~~G~~L~~~---~~--~~~~~~~~~i~~-aL~ 125 (365)
T PRK09188 71 EIRALKTVRG------------------I-GVVPQLLATGKDGLVRGWTEGVPLHLA---RP--HGDPAWFRSAHR-ALR 125 (365)
T ss_pred HHHHHHhccC------------------C-CCCcEEEEcCCcEEEEEccCCCCHHHh---Cc--cchHHHHHHHHH-HHH
Confidence 8877777643 1 235666666778999999999988632 11 112344444443 377
Q ss_pred HHHhcCeeccCC-CCCCeEEccCCCCceEEEecccccccCh
Q 002927 168 QIYVDGFFNGDP-HPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 168 ~i~~~G~~H~D~-hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
++|..|++|||+ ||+|||++.+ ++++|+|||+++.+.+
T Consensus 126 ~lH~~gIiHrDL~KP~NILv~~~--~~ikLiDFGlA~~~~~ 164 (365)
T PRK09188 126 DLHRAGITHNDLAKPQNWLMGPD--GEAAVIDFQLASVFRR 164 (365)
T ss_pred HHHHCCCeeCCCCCcceEEEcCC--CCEEEEECccceeccc
Confidence 899999999999 8999999754 8999999999998865
No 30
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.56 E-value=2.1e-15 Score=164.09 Aligned_cols=154 Identities=20% Similarity=0.288 Sum_probs=104.9
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+-||.|+||.||+|+.+ +|+.||||-.+. ++.. + +|+-=.+|.
T Consensus 16 ~klGDGTfGsV~la~~~~~~~~VAIK~MK~--------------Kf~s----------~------------ee~~nLREv 59 (538)
T KOG0661|consen 16 RKLGDGTFGSVYLAKSKETGELVAIKKMKK--------------KFYS----------W------------EECMNLREV 59 (538)
T ss_pred HHhcCCcceeEEEeeecCCCceeeHHHHHh--------------hhcc----------H------------HHHHHHHHH
Confidence 45999999999999966 899999993211 1111 1 222234455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-c-CCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S-SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~-~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
+.++++..+ .--|.+-+|+. . ...++||||++ ..|.++.+-+...+....+...+.+++
T Consensus 60 ksL~kln~h----------------pniikL~Evi~d~~~~L~fVfE~Md-~NLYqLmK~R~r~fse~~irnim~QilqG 122 (538)
T KOG0661|consen 60 KSLRKLNPH----------------PNIIKLKEVIRDNDRILYFVFEFMD-CNLYQLMKDRNRLFSESDIRNIMYQILQG 122 (538)
T ss_pred HHHHhcCCC----------------CcchhhHHHhhccCceEeeeHHhhh-hhHHHHHhhcCCcCCHHHHHHHHHHHHHH
Confidence 555554310 11233344443 2 25679999997 456666555555566677777777776
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh--HHHHHHHHHHHH
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS--SMKQALAKMFFA 219 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~--~~r~~~~~l~~a 219 (864)
+..||++||||||+||+||||... .-|+|.|||+++++.. ...+.+..-||.
T Consensus 123 L~hiHk~GfFHRDlKPENiLi~~~--~~iKiaDFGLARev~SkpPYTeYVSTRWYR 176 (538)
T KOG0661|consen 123 LAHIHKHGFFHRDLKPENILISGN--DVIKIADFGLAREVRSKPPYTEYVSTRWYR 176 (538)
T ss_pred HHHHHhcCcccccCChhheEeccc--ceeEecccccccccccCCCcchhhhccccc
Confidence 889999999999999999999843 5799999999998854 345566666654
No 31
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.55 E-value=3.6e-14 Score=146.92 Aligned_cols=142 Identities=19% Similarity=0.262 Sum_probs=101.5
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
++||+|++|.||+|+. +|+.|+||+..+.....-..|.. .....+.+|++
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~-----------------------------~~~~~~~~E~~ 51 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDER-----------------------------IRRERTRREAR 51 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHH-----------------------------HHHHHHHHHHH
Confidence 5799999999999987 78899999877643221111110 01123556777
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHHHHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQ 168 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~l~~ 168 (864)
++.++++ ..+.+|.++. ....+|+|||++|.+|.++..... .....++..+.. .+.+
T Consensus 52 ~l~~l~~------------------~~i~~p~~~~~~~~~~~lv~e~~~G~~L~~~~~~~~--~~~~~i~~~i~~-~l~~ 110 (211)
T PRK14879 52 IMSRARK------------------AGVNVPAVYFVDPENFIIVMEYIEGEPLKDLINSNG--MEELELSREIGR-LVGK 110 (211)
T ss_pred HHHHHHH------------------CCCCCCeEEEEeCCCCEEEEEEeCCcCHHHHHHhcc--HHHHHHHHHHHH-HHHH
Confidence 7777654 2466777764 677899999999999988754211 123345555444 3778
Q ss_pred HHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 169 IYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 169 i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+|..|++|+|+||+|||++ + +.++|+|||+++...
T Consensus 111 lH~~~i~H~Dl~p~Nil~~-~--~~~~liDf~~a~~~~ 145 (211)
T PRK14879 111 LHSAGIIHGDLTTSNMILS-G--GKIYLIDFGLAEFSK 145 (211)
T ss_pred HHhCCcccCCCCcccEEEE-C--CCEEEEECCcccCCC
Confidence 9999999999999999998 3 789999999988644
No 32
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=99.54 E-value=3e-15 Score=156.36 Aligned_cols=151 Identities=16% Similarity=0.188 Sum_probs=101.9
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
.-|++|+||.||||+.+ +++.||+|-.+++-++. .+.+. ..+|.
T Consensus 82 nrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~--------------------GFPIt---------------sLREI 126 (419)
T KOG0663|consen 82 NRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKE--------------------GFPIT---------------SLREI 126 (419)
T ss_pred hhcccCcceeEEEeccCCcceeEEeeecccccccC--------------------CCcch---------------hHHHH
Confidence 56999999999999986 89999999776544211 12211 33455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---cCCceEEEeecCCcCCCChHHH-hh--cCCCHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESL-EA--FGVNKQKVVEEITR 163 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~-~~--~~~~~~~l~~~~~~ 163 (864)
.-+.+++| ...|.|-+|.- -.+.+||||||+ .|+..+ +. ..+...++--...+
T Consensus 127 niLl~~~H-----------------~NIV~vkEVVvG~~~d~iy~VMe~~E----hDLksl~d~m~q~F~~~evK~L~~Q 185 (419)
T KOG0663|consen 127 NILLKARH-----------------PNIVEVKEVVVGSNMDKIYIVMEYVE----HDLKSLMETMKQPFLPGEVKTLMLQ 185 (419)
T ss_pred HHHHhcCC-----------------CCeeeeEEEEeccccceeeeeHHHHH----hhHHHHHHhccCCCchHHHHHHHHH
Confidence 55555443 12355666664 246789999998 454332 11 12333333223333
Q ss_pred HH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH---HHHHHHHHHHH
Q 002927 164 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS---MKQALAKMFFA 219 (864)
Q Consensus 164 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~---~r~~~~~l~~a 219 (864)
.+ ++.+|.+.|+||||||+|+|+... |.+++.|||+++.+... ....++.+||.
T Consensus 186 lL~glk~lH~~wilHRDLK~SNLLm~~~--G~lKiaDFGLAR~ygsp~k~~T~lVVTLWYR 244 (419)
T KOG0663|consen 186 LLRGLKHLHDNWILHRDLKTSNLLLSHK--GILKIADFGLAREYGSPLKPYTPLVVTLWYR 244 (419)
T ss_pred HHHHHHHHhhceeEecccchhheeeccC--CcEEecccchhhhhcCCcccCcceEEEeeec
Confidence 33 888999999999999999999966 99999999999998776 44445555654
No 33
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.52 E-value=1.6e-13 Score=140.81 Aligned_cols=139 Identities=22% Similarity=0.275 Sum_probs=97.7
Q ss_pred cccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHHHH
Q 002927 13 LATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENT 92 (864)
Q Consensus 13 lasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~n~ 92 (864)
|++|++|.||+|.. +|++|+||+..+.....-..|.. .+.-.+.+|.+++
T Consensus 2 ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~-----------------------------~~~~~~~~E~~~l 51 (199)
T TIGR03724 2 IAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDER-----------------------------IRRERTRNEARLL 51 (199)
T ss_pred CCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHH-----------------------------HHHHHHHHHHHHH
Confidence 78999999999984 78999999865432111000100 0011245677777
Q ss_pred HHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHHHHHHH
Q 002927 93 RIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIY 170 (864)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~l~~i~ 170 (864)
.++++. .+.+|.++. ....+|+|||++|.+|.++..... ..++..+... +..+|
T Consensus 52 ~~l~~~------------------~i~~p~~~~~~~~~~~lv~e~~~g~~l~~~~~~~~-----~~~~~~i~~~-l~~lH 107 (199)
T TIGR03724 52 SRARKA------------------GVNTPVVYDVDPDNKTIVMEYIEGKPLKDVIEEGN-----DELLREIGRL-VGKLH 107 (199)
T ss_pred HHHHHC------------------CCCCCEEEEEECCCCEEEEEEECCccHHHHHhhcH-----HHHHHHHHHH-HHHHH
Confidence 777652 356777775 566799999999999987643211 1455555544 66899
Q ss_pred hcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 171 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 171 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
..|++|+|+||+||+++ + ++++++|||+++...+.
T Consensus 108 ~~gi~H~Dl~~~Nil~~-~--~~~~liDfg~a~~~~~~ 142 (199)
T TIGR03724 108 KAGIVHGDLTTSNIIVR-D--DKLYLIDFGLGKYSDEI 142 (199)
T ss_pred HCCeecCCCCcceEEEE-C--CcEEEEECCCCcCCCcH
Confidence 99999999999999998 3 79999999998875543
No 34
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.52 E-value=7.9e-14 Score=158.25 Aligned_cols=184 Identities=15% Similarity=0.129 Sum_probs=118.7
Q ss_pred ccccccccceeeEEEEec-CCCEEEEEEecCChH--HHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHH
Q 002927 10 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIK--TIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 86 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~--~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 86 (864)
.+.||.|+||||-+|..+ +++.|||||.+-... .+..
T Consensus 191 ~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~---------------------------------------- 230 (586)
T KOG0667|consen 191 LEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQ---------------------------------------- 230 (586)
T ss_pred EEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHH----------------------------------------
Confidence 368999999999999975 899999999764322 1111
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHH
Q 002927 87 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEI 161 (864)
Q Consensus 87 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~ 161 (864)
.|.+-++++++.- .....++-+.++ ....+||.|.+ +..|.++.+..+ .|+....+...+
T Consensus 231 ~Ei~iL~~ln~~d--------------~~~~~n~Vrm~d~F~fr~HlciVfELL-~~NLYellK~n~f~Glsl~~ir~~~ 295 (586)
T KOG0667|consen 231 IEIRILELLNKHD--------------PDDKYNIVRMLDYFYFRNHLCIVFELL-STNLYELLKNNKFRGLSLPLVRKFA 295 (586)
T ss_pred HHHHHHHHHhccC--------------CCCCeeEEEeeeccccccceeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHH
Confidence 2444445554210 112234444543 67889999988 577777765432 345544333333
Q ss_pred HHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHHHHHHHHHHHHHhCCHHHHHHHHHHcCCCc
Q 002927 162 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRL 239 (864)
Q Consensus 162 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~G~~~ 239 (864)
.+++ |..||+.|||||||||+|||+..-...+|++||||.+...++..-..+ ...+.+.-++++.+....
T Consensus 296 ~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~vytYi--------QSRfYRAPEVILGlpY~~ 367 (586)
T KOG0667|consen 296 QQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRVYTYI--------QSRFYRAPEVILGLPYDT 367 (586)
T ss_pred HHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccccCCcceeee--------eccccccchhhccCCCCC
Confidence 3332 667899999999999999999754446899999999998776543222 233344556666555555
Q ss_pred CCCcHHHHHHHHHHHHh
Q 002927 240 RLDVPEQAMEVSTLFFR 256 (864)
Q Consensus 240 ~~~~~~~~~~~~~~~~~ 256 (864)
..|+=-+-.-+++++..
T Consensus 368 ~IDmWSLGCIlAEL~tG 384 (586)
T KOG0667|consen 368 AIDMWSLGCILAELFTG 384 (586)
T ss_pred ccceeehhhhHHhHhcC
Confidence 55655555556666654
No 35
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=99.52 E-value=2.1e-14 Score=146.08 Aligned_cols=144 Identities=21% Similarity=0.261 Sum_probs=98.6
Q ss_pred ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 10 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
.+-+|+|.+|.||+|+.. +|+.||||-.+.+-.+ +.+..+..+|+.+.+|
T Consensus 7 ~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~k-----------------------------dGi~~talREIK~Lqe 57 (318)
T KOG0659|consen 7 LEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAK-----------------------------DGINRTALREIKLLQE 57 (318)
T ss_pred hhhhcCcceEEEEEEEecCCCcEEEEEEeeccccc-----------------------------cCccHHHHHHHHHHHH
Confidence 367999999999999965 8999999977654211 1112223345555555
Q ss_pred HH--HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHH---hhcCCCHHHHHHHHHH
Q 002927 89 AE--NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESL---EAFGVNKQKVVEEITR 163 (864)
Q Consensus 89 a~--n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~---~~~~~~~~~l~~~~~~ 163 (864)
.+ |+-.+...|. ..+...||.||++ +|++.. ...-+.+..+-..+..
T Consensus 58 l~h~nIi~LiD~F~------------------------~~~~l~lVfEfm~----tdLe~vIkd~~i~l~pa~iK~y~~m 109 (318)
T KOG0659|consen 58 LKHPNIIELIDVFP------------------------HKSNLSLVFEFMP----TDLEVVIKDKNIILSPADIKSYMLM 109 (318)
T ss_pred ccCcchhhhhhhcc------------------------CCCceEEEEEecc----ccHHHHhcccccccCHHHHHHHHHH
Confidence 54 2333322221 0345569999998 455432 2233455666665555
Q ss_pred HH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHHHH
Q 002927 164 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQA 212 (864)
Q Consensus 164 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~ 212 (864)
.+ +..+|++.|+|||+||.|+|++++ |.++|.|||+++.+....+..
T Consensus 110 ~LkGl~y~H~~~IlHRDlKPnNLLis~~--g~lKiADFGLAr~f~~p~~~~ 158 (318)
T KOG0659|consen 110 TLKGLAYCHSKWILHRDLKPNNLLISSD--GQLKIADFGLARFFGSPNRIQ 158 (318)
T ss_pred HHHHHHHHHhhhhhcccCCccceEEcCC--CcEEeecccchhccCCCCccc
Confidence 55 788899999999999999999966 999999999999887655443
No 36
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.51 E-value=2.2e-15 Score=154.46 Aligned_cols=147 Identities=18% Similarity=0.233 Sum_probs=111.5
Q ss_pred CccccccccccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHh
Q 002927 1 MGGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEA 79 (864)
Q Consensus 1 ~~~~F~~fd~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~ 79 (864)
++|+|.-+++ ||.||+|.||+|.++ +|+.||||-.. ++.| +.+++.|+.
T Consensus 31 PEEVFDi~~K--LGEGSYGSV~KAIH~EsG~v~AIK~VP------V~sD-------------------LQEIIKEIS--- 80 (502)
T KOG0574|consen 31 PEEVFDIVGK--LGEGSYGSVHKAIHRESGHVLAIKKVP------VDTD-------------------LQEIIKEIS--- 80 (502)
T ss_pred hHHHHHHHHH--hcCCcchHHHHHHHhccCcEEEEEecC------ccch-------------------HHHHHHHHH---
Confidence 3577777654 999999999999987 89999999432 1222 333343322
Q ss_pred HhhccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHH
Q 002927 80 PKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQ 155 (864)
Q Consensus 80 ~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~ 155 (864)
-++++.. -+|-+.|. .+..++|||||..++++|+.+++...+...
T Consensus 81 -----------IMQQC~S--------------------~yVVKYYGSYFK~sDLWIVMEYCGAGSiSDI~R~R~K~L~E~ 129 (502)
T KOG0574|consen 81 -----------IMQQCKS--------------------KYVVKYYGSYFKHSDLWIVMEYCGAGSISDIMRARRKPLSEQ 129 (502)
T ss_pred -----------HHHHcCC--------------------chhhhhhhhhccCCceEeehhhcCCCcHHHHHHHhcCCccHH
Confidence 2222211 11222221 577889999999999999999888888888
Q ss_pred HHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHH
Q 002927 156 KVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMK 210 (864)
Q Consensus 156 ~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r 210 (864)
+++..+-..+ ++.+|...-+|||+|.||||++.+ |..+|.|||.++++++.+.
T Consensus 130 EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~--G~AKLADFGVAGQLTDTMA 184 (502)
T KOG0574|consen 130 EISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTD--GIAKLADFGVAGQLTDTMA 184 (502)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEccc--chhhhhhccccchhhhhHH
Confidence 8888777766 888999999999999999999976 8999999999999998764
No 37
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=99.51 E-value=5.5e-14 Score=149.62 Aligned_cols=150 Identities=21% Similarity=0.259 Sum_probs=93.7
Q ss_pred cccccccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhc
Q 002927 5 FMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 83 (864)
Q Consensus 5 F~~fd~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~El 83 (864)
|+.+|. ||.|++|.||+|+.+ +|+.||+|.++-..++.- .| ..
T Consensus 13 ~~~~ek--lGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG-----------------~P------------~t----- 56 (323)
T KOG0594|consen 13 YEKVEK--LGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEG-----------------VP------------ST----- 56 (323)
T ss_pred HHHHHH--hCCCCceEEEEEEEecCCCEEEEEEEeccccccC-----------------CC------------ch-----
Confidence 455544 999999999999976 899999998764322100 00 00
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cC------CceEEEeecCCcCCCChHHHhh---cCCC
Q 002927 84 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SS------ETVLILEFMDGIRLNDCESLEA---FGVN 153 (864)
Q Consensus 84 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~------~~vLvmE~i~G~~L~~~~~~~~---~~~~ 153 (864)
-.+|..-++++++. .+ .+.+-.+.. .+ .-+||+||++ .+|.++..... .+.+
T Consensus 57 -aiREisllk~L~~~---------------~~-iv~L~dv~~~~~~~~~~~~l~lvfe~~d-~DL~~ymd~~~~~~~g~~ 118 (323)
T KOG0594|consen 57 -AIREISLLKRLSHA---------------NH-IVRLHDVIHTSNNHRGIGKLYLVFEFLD-RDLKKYMDSLPKKPQGLP 118 (323)
T ss_pred -hhHHHHHHHHhCCC---------------cc-eEEEEeeeeecccccccceEEEEEEeec-ccHHHHHHhccccccCCC
Confidence 11233333444331 01 233444444 22 5679999998 33443332222 2455
Q ss_pred HHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHH
Q 002927 154 KQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMK 210 (864)
Q Consensus 154 ~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r 210 (864)
...+-..+.+++ +..+|++||+|||+||.||+|+++ |.++|+|||+++.+.-..+
T Consensus 119 ~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~--G~lKlaDFGlAra~~ip~~ 175 (323)
T KOG0594|consen 119 PRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSS--GVLKLADFGLARAFSIPMR 175 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCC--CcEeeeccchHHHhcCCcc
Confidence 433333333333 777899999999999999999975 9999999999986663333
No 38
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=99.51 E-value=5.9e-14 Score=155.17 Aligned_cols=142 Identities=26% Similarity=0.320 Sum_probs=98.3
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH-HHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF-NSE 88 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~-~~E 88 (864)
+-||.|||++|++|+.+ +++++||||.-... + +.| +-++| .+|
T Consensus 79 ~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~-------------I----------------ike------~KvkYV~~E 123 (604)
T KOG0592|consen 79 KILGEGSYSTVVLAREKATGKEYAIKVLDKRY-------------I----------------IKE------KKVKYVTRE 123 (604)
T ss_pred heeccccceeEEEeeecCCCceeeHhhhhHHH-------------H----------------Hhh------cccchhhHH
Confidence 56999999999999976 89999999753211 0 000 11122 234
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHH----H
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVE----E 160 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~----~ 160 (864)
-..+.++.+ ++ .|-++|. ....|.|+||++++.|-+++. +.|.--+.+++ .
T Consensus 124 k~~l~~L~~-----------------hP--givkLy~TFQD~~sLYFvLe~A~nGdll~~i~--K~Gsfde~caR~YAAe 182 (604)
T KOG0592|consen 124 KEALTQLSG-----------------HP--GIVKLYFTFQDEESLYFVLEYAPNGDLLDLIK--KYGSFDETCARFYAAE 182 (604)
T ss_pred HHHHHHhhC-----------------CC--CeEEEEEEeecccceEEEEEecCCCcHHHHHH--HhCcchHHHHHHHHHH
Confidence 445555532 22 2345554 677899999999999988743 33321122222 2
Q ss_pred HHHHHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHHH
Q 002927 161 ITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQ 211 (864)
Q Consensus 161 ~~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~ 211 (864)
++. .++.||..||||||+||+|||++.| |+++|.|||.++.+++....
T Consensus 183 Ild-AleylH~~GIIHRDlKPENILLd~d--mhikITDFGsAK~l~~~~~~ 230 (604)
T KOG0592|consen 183 ILD-ALEYLHSNGIIHRDLKPENILLDKD--GHIKITDFGSAKILSPSQKS 230 (604)
T ss_pred HHH-HHHHHHhcCceeccCChhheeEcCC--CcEEEeeccccccCChhhcc
Confidence 222 2889999999999999999999966 99999999999999987654
No 39
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.50 E-value=1.5e-14 Score=162.38 Aligned_cols=137 Identities=17% Similarity=0.199 Sum_probs=99.3
Q ss_pred cccccccceeeEEEEe-cCCCEEEEEEec------CChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhc
Q 002927 11 TPLATASIAQVHRATL-VDGRQVVVKVQH------QGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 83 (864)
Q Consensus 11 ~plasaSigqV~~A~l-~~G~~VAVKv~~------p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~El 83 (864)
+-||.|+||+||+++. .+|+.||+||.. ++..+.+..++++.+
T Consensus 24 ~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr------------------------------ 73 (592)
T KOG0575|consen 24 RFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHR------------------------------ 73 (592)
T ss_pred eeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHH------------------------------
Confidence 5799999999999997 689999999853 333333333332211
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHH
Q 002927 84 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEI 161 (864)
Q Consensus 84 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~ 161 (864)
.+. +++ |.+-..++ +..-|||.|+|+-.+|..+.+ ++..+...++...+
T Consensus 74 ----------~L~------------------HpnIV~f~~~FEDs~nVYivLELC~~~sL~el~K-rrk~ltEpEary~l 124 (592)
T KOG0575|consen 74 ----------SLK------------------HPNIVQFYHFFEDSNNVYIVLELCHRGSLMELLK-RRKPLTEPEARYFL 124 (592)
T ss_pred ----------hcC------------------CCcEEeeeeEeecCCceEEEEEecCCccHHHHHH-hcCCCCcHHHHHHH
Confidence 111 111 22222223 556689999999999998876 45566666666655
Q ss_pred HHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 162 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 162 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
.+++ +..+|.+||+|||||-||||++++ ..++|.|||++..+..+
T Consensus 125 ~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~--~~VKIgDFGLAt~le~~ 171 (592)
T KOG0575|consen 125 RQIVEGLKYLHSLGIIHRDLKLGNLFLNEN--MNVKIGDFGLATQLEYD 171 (592)
T ss_pred HHHHHHHHHHHhcCceecccchhheeecCc--CcEEecccceeeeecCc
Confidence 5555 888999999999999999999965 89999999999998743
No 40
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.50 E-value=2.2e-13 Score=138.14 Aligned_cols=177 Identities=15% Similarity=0.156 Sum_probs=117.5
Q ss_pred cccccccceeeEEEEecC-------CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHh---h---CCCCChHHHHHHHHH
Q 002927 11 TPLATASIAQVHRATLVD-------GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAW---A---EPQYDFNPIIDEWCK 77 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~-------G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~---~---~~~~~~~~~~~e~~~ 77 (864)
-+|++|-=+-||.|...+ +..|||||-|....+- + ....++.. + ..+.+...++..+.
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~F-----k---~~~~y~~~~~rf~~~~~k~~~~~~~~~wa- 73 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEF-----K---NRDKYIKDDYRFKDRFSKLNPRKIIRMWA- 73 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeE-----c---ChhhhccCCcccccCcCCCCHHHHHHHHH-
Confidence 468999999999998653 4899999988554321 1 01111110 0 01123444555444
Q ss_pred HhHhhccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCC---H
Q 002927 78 EAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVN---K 154 (864)
Q Consensus 78 ~~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~---~ 154 (864)
.+|++++.+++.. ++.||+++...+.+|||||+.|..+... .+.....+ .
T Consensus 74 --------~kE~r~L~rl~~~------------------Gv~vP~pi~~~~~~lvME~Ig~~~~~~~-~Lkd~~~~~~~~ 126 (197)
T cd05146 74 --------EKEMHNLKRMQKA------------------GIPCPEVVVLKKHVLVMSFIGDDQVPAP-KLKDAKLNDEEM 126 (197)
T ss_pred --------HHHHHHHHHHHHc------------------CCCCCeEEEecCCEEEEEEcCCCCccch-hhhccccCHHHH
Confidence 3599999998763 5889999998999999999987533211 11111222 2
Q ss_pred HHHHHHHHHHHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 002927 155 QKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFA 233 (864)
Q Consensus 155 ~~l~~~~~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~ 233 (864)
..+...++..+..++|..|++|+||+|.|||+.+ ++++|||||.+...+...-..+ +.+|.+.+.+.+.
T Consensus 127 ~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL~~~---~~v~iIDF~qav~~~hp~a~~~-------l~RD~~ni~~fF~ 195 (197)
T cd05146 127 KNAYYQVLSMMKQLYKECNLVHADLSEYNMLWHD---GKVWFIDVSQSVEPTHPHGLEF-------LFRDCRNVIQFFQ 195 (197)
T ss_pred HHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEC---CcEEEEECCCceeCCCCCHHHH-------HHHHHHHHHHHhc
Confidence 3445555655555568999999999999999973 6899999999998876544333 4567766666553
No 41
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=99.49 E-value=6.2e-14 Score=149.37 Aligned_cols=143 Identities=18% Similarity=0.225 Sum_probs=96.1
Q ss_pred cccccc-cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhh
Q 002927 5 FMDFVE-TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKE 82 (864)
Q Consensus 5 F~~fd~-~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~E 82 (864)
.++|+- +.||.||||+|+.++.+ +|+.+|+||.+... .++. .|
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~--iv~~---------------------------------~e 68 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKK--IVEK---------------------------------KE 68 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhH--hhhh---------------------------------hh
Confidence 456664 78999999999999976 79999999865311 0000 01
Q ss_pred cc-HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---cCCceEEEeecCCcCCCChHHHhhcCCCHHHHH
Q 002927 83 LD-FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVV 158 (864)
Q Consensus 83 ld-~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~ 158 (864)
++ ...|..-+.++++ ++.|.-.|. .++.+||+||+.|+.|.-.+.. +..+......
T Consensus 69 ~~~~~~Er~IL~~v~h-------------------PFiv~l~ysFQt~~kLylVld~~~GGeLf~hL~~-eg~F~E~~ar 128 (357)
T KOG0598|consen 69 VRHTKAERNILSKIKH-------------------PFIVKLIYSFQTEEKLYLVLDYLNGGELFYHLQR-EGRFSEDRAR 128 (357)
T ss_pred HHHHHHHHHHHHhCCC-------------------CcEeeeEEecccCCeEEEEEeccCCccHHHHHHh-cCCcchhHHH
Confidence 11 1223333333322 344555553 5678999999999998765431 2223332222
Q ss_pred HHHHH--HHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 159 EEITR--AYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 159 ~~~~~--~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
-.+++ +.+..+|+.||+|||+||+|||++.+ |.++|.|||+++.
T Consensus 129 fYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~--GHi~LtDFgL~k~ 174 (357)
T KOG0598|consen 129 FYLAEIVLALGYLHSKGIIYRDLKPENILLDEQ--GHIKLTDFGLCKE 174 (357)
T ss_pred HHHHHHHHHHHHHHhCCeeeccCCHHHeeecCC--CcEEEeccccchh
Confidence 23333 33889999999999999999999976 9999999999984
No 42
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=99.48 E-value=1.1e-13 Score=142.85 Aligned_cols=146 Identities=18% Similarity=0.234 Sum_probs=99.0
Q ss_pred ccccc-cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhc
Q 002927 6 MDFVE-TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 83 (864)
Q Consensus 6 ~~fd~-~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~El 83 (864)
++|+. .-||.||||.||..+.+ +|.-+|+||+....- + + ++.+.
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~v--V--k---lKQve--------------------------- 89 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKV--V--K---LKQVE--------------------------- 89 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHH--H--H---HHHHH---------------------------
Confidence 34553 68999999999999987 799999998652110 0 0 00000
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCC--HHHH
Q 002927 84 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVN--KQKV 157 (864)
Q Consensus 84 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~--~~~l 157 (864)
--.+|-+-+.+..+ ..+-+++. .+..+|||||++|+.|..+.+.. ..++ ..++
T Consensus 90 H~~nEk~vL~~v~~--------------------PFlv~l~~t~~d~~~lymvmeyv~GGElFS~Lrk~-~rF~e~~arF 148 (355)
T KOG0616|consen 90 HTHNEKRVLKAVSH--------------------PFLVKLYGTFKDNSNLYMVMEYVPGGELFSYLRKS-GRFSEPHARF 148 (355)
T ss_pred HHhhHHHHHhhccC--------------------ceeEEEEEeeccCCeEEEEEeccCCccHHHHHHhc-CCCCchhHHH
Confidence 01234444444322 12233332 46678999999999998875421 1232 2333
Q ss_pred HHHHHHHHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 158 VEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 158 ~~~~~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
...-+-+.++.||..++++||+||+|||++.+ |.|+++|||.+++++..
T Consensus 149 YAAeivlAleylH~~~iiYRDLKPENiLlD~~--G~iKitDFGFAK~v~~r 197 (355)
T KOG0616|consen 149 YAAEIVLALEYLHSLDIIYRDLKPENLLLDQN--GHIKITDFGFAKRVSGR 197 (355)
T ss_pred HHHHHHHHHHHHHhcCeeeccCChHHeeeccC--CcEEEEeccceEEecCc
Confidence 33344445899999999999999999999976 99999999999999875
No 43
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.48 E-value=4.9e-13 Score=135.78 Aligned_cols=159 Identities=16% Similarity=0.146 Sum_probs=107.5
Q ss_pred ccccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 10 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
.+.|.+++||.||.+.. .|++|+.+-..- +-..++.++ . . -+.+|+
T Consensus 7 ~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~--------~~~~~~~~~--------------------~----~-l~~rE~ 52 (218)
T PRK12274 7 NEPLKSDTFGRILLVRG-GERKFVRRDLSA--------APWWLRGVA--------------------W----W-LARREA 52 (218)
T ss_pred ceeecCCCcceEEEeec-CCceeeeccccc--------chhhhhhHH--------------------H----H-HHHHHH
Confidence 36799999999998775 778888663211 000000000 0 0 156688
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQI 169 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~l~~i 169 (864)
+.+.++.+ ...+|+++.....+++|||++|.+|.+... . ....+...+.+ .++++
T Consensus 53 ~iL~~L~~-------------------~~~vP~ll~~~~~~lvmeyI~G~~L~~~~~--~---~~~~~~~qi~~-~L~~l 107 (218)
T PRK12274 53 LALRQLDG-------------------LPRTPRLLHWDGRHLDRSYLAGAAMYQRPP--R---GDLAYFRAARR-LLQQL 107 (218)
T ss_pred HHHHhcCC-------------------CCCCCEEEEEcCEEEEEeeecCccHHhhhh--h---hhHHHHHHHHH-HHHHH
Confidence 88877643 245788876566899999999999865421 1 11233444443 47789
Q ss_pred HhcCeeccCC-CCCCeEEccCCCCceEEEecccccccChHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 002927 170 YVDGFFNGDP-HPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAE 234 (864)
Q Consensus 170 ~~~G~~H~D~-hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~ 234 (864)
|..|++|+|+ ||+|||++.+ |+++|||||++....+.-+ ...-+..+|...+.+.++.
T Consensus 108 H~~GIvHrDL~kp~NILv~~~--g~i~LIDFG~A~~~~~~~~-----~~r~L~~rDl~~llk~~~~ 166 (218)
T PRK12274 108 HRCGVAHNDLAKEANWLVQED--GSPAVIDFQLAVRGNPRAR-----WMRLLAREDLRHLLKHKRM 166 (218)
T ss_pred HHCcCccCCCCCcceEEEcCC--CCEEEEECCCceecCCcch-----HHHHHHHHHHHHHHHHHHh
Confidence 9999999999 7999999854 8999999999987665333 1222335899999988866
No 44
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.48 E-value=1.8e-13 Score=154.08 Aligned_cols=141 Identities=17% Similarity=0.201 Sum_probs=95.9
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|.||+|+.+ +|+.||||+.+..... .. +.... +..|.
T Consensus 7 ~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~~--------------------------~~~~~------~~~E~ 52 (363)
T cd05628 7 KVIGRGAFGEVRLVQKKDTGHVYAMKILRKADML--EK--------------------------EQVGH------IRAER 52 (363)
T ss_pred EEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHH--Hh--------------------------hHHHH------HHHHH
Confidence 67999999999999976 7999999987632100 00 00011 22343
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..+.++.+ ..|++++. ....+|||||++|++|.++... ...++...+...+.+++
T Consensus 53 ~il~~~~~--------------------~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~ 111 (363)
T cd05628 53 DILVEADS--------------------LWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMK-KDTLTEEETQFYIAETV 111 (363)
T ss_pred HHHHhCCC--------------------CCcceEEEEEecCCeEEEEEcCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHH
Confidence 33333211 12333332 4567899999999999887542 23455555555444444
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+..+|..||+|||+||.|||++.+ +.++|+|||+++.+...
T Consensus 112 ~aL~~lH~~givHrDlKp~NILi~~~--~~vkL~DFGla~~~~~~ 154 (363)
T cd05628 112 LAIDSIHQLGFIHRDIKPDNLLLDSK--GHVKLSDFGLCTGLKKA 154 (363)
T ss_pred HHHHHHHhCCeEecCCCHHHeEECCC--CCEEEeeccCccccccc
Confidence 788999999999999999999865 89999999999877554
No 45
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=99.47 E-value=1.6e-13 Score=152.51 Aligned_cols=140 Identities=17% Similarity=0.144 Sum_probs=103.8
Q ss_pred ccccccceeeEEEEecCCCE-EEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 12 PLATASIAQVHRATLVDGRQ-VVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 12 plasaSigqV~~A~l~~G~~-VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
-+|+|++|+||+|.++ |+. ||||+..+.-...-. +-+|.+|+.
T Consensus 48 ~iG~G~~g~V~~~~~~-g~~~vavK~~~~~~~~~~~-----------------------------------~~~f~~E~~ 91 (362)
T KOG0192|consen 48 VLGSGSFGTVYKGKWR-GTDVVAVKIISDPDFDDES-----------------------------------RKAFRREAS 91 (362)
T ss_pred hcccCCceeEEEEEeC-CceeEEEEEecchhcChHH-----------------------------------HHHHHHHHH
Confidence 4999999999999984 666 999987653221100 224777888
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCE-EEeeEEecC--CceEEEeecCCcCCCChHHH-hhcCCCHHHHHHHHHHHH-
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQSS--ETVLILEFMDGIRLNDCESL-EAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v-~vP~v~~~~--~~vLvmE~i~G~~L~~~~~~-~~~~~~~~~l~~~~~~~~- 165 (864)
-+.+++| ++| .+.-+.... ...|||||++|++|.++... ....++....+..+.++.
T Consensus 92 il~~l~H------------------pNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiAr 153 (362)
T KOG0192|consen 92 LLSRLRH------------------PNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIAR 153 (362)
T ss_pred HHHhCCC------------------CCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHH
Confidence 8888654 222 222222222 36899999999999998765 356677777777777766
Q ss_pred -HHHHHhcC-eeccCCCCCCeEEccCCCC-ceEEEecccccccCh
Q 002927 166 -AHQIYVDG-FFNGDPHPGNFLVSKDPPH-RPILLDFGLTKKLSS 207 (864)
Q Consensus 166 -l~~i~~~G-~~H~D~hPgNIlv~~~~~g-~i~LiDFG~~~~l~~ 207 (864)
+..+|..+ ||||||||.||||+.+ + .++|.|||+++....
T Consensus 154 Gm~YLH~~~~iIHrDLK~~NiLv~~~--~~~~KI~DFGlsr~~~~ 196 (362)
T KOG0192|consen 154 GMEYLHSEGPIIHRDLKSDNILVDLK--GKTLKIADFGLSREKVI 196 (362)
T ss_pred HHHHHhcCCCeeecccChhhEEEcCC--CCEEEECCCccceeecc
Confidence 88999999 9999999999999965 6 899999999976654
No 46
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.47 E-value=2.4e-13 Score=152.17 Aligned_cols=146 Identities=17% Similarity=0.215 Sum_probs=98.7
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|+||.|+.|+.. +|+.||||+........ + . ..+. +. ..+|.
T Consensus 23 ~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~---~---------------~-~~~~-------~~------i~rEi 70 (370)
T KOG0583|consen 23 RTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSS---K---------------S-QKLD-------EL------IKREI 70 (370)
T ss_pred eeecCCCCeeEEEeeeccCCCeEEEEEechhcccc---c---------------c-cccc-------hh------hHHHH
Confidence 78999999999999865 89999999865320000 0 0 0000 01 11455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
.++++++.. .-.+.+-+++. .+..++||||+.|+.|.+.... ...+..........+++ +
T Consensus 71 ~~~~~~~~H----------------pnI~~l~ev~~t~~~~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav 133 (370)
T KOG0583|consen 71 SILRRLRSH----------------PNIIRLLEVFATPTKIYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAV 133 (370)
T ss_pred HHHHHhccC----------------CCEeEEEEEEecCCeEEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHH
Confidence 666666520 11244555555 5678999999999888887653 33444433333333332 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.++|..|++|||+||+||+++.++ +.++|+|||++....
T Consensus 134 ~y~H~~gi~HRDLK~ENilld~~~-~~~Kl~DFG~s~~~~ 172 (370)
T KOG0583|consen 134 AYCHSRGIVHRDLKPENILLDGNE-GNLKLSDFGLSAISP 172 (370)
T ss_pred HHHHhCCEeeCCCCHHHEEecCCC-CCEEEeccccccccC
Confidence 888999999999999999998643 899999999998773
No 47
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.46 E-value=2.2e-13 Score=151.43 Aligned_cols=143 Identities=18% Similarity=0.198 Sum_probs=94.6
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.+ +|+.||||+.+...... .. ..-.+..|.
T Consensus 7 ~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~----~~------------------------------~~~~~~~e~ 52 (333)
T cd05600 7 TQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFK----LN------------------------------EVRHVLTER 52 (333)
T ss_pred EEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhh----hh------------------------------HHHHHHHHH
Confidence 67999999999999986 69999999876422110 00 000133344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
..+.++.+. .-+.+-..+. ....+|||||++|.+|.++... ...+....+...+.+++ +
T Consensus 53 ~~l~~~~h~-----------------~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~-~~~l~~~~~~~~~~qi~~~l 114 (333)
T cd05600 53 DILTTTKSE-----------------WLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNN-LGVLSEDHARFYMAEMFEAV 114 (333)
T ss_pred HHHHhCCCC-----------------CCccEEEEEEcCCEEEEEEeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHH
Confidence 444443211 0111222222 4567899999999999887542 22344444444443433 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+|..|++|+|+||.||+++.+ +.++|+|||++.....
T Consensus 115 ~~lH~~~ivH~dlkp~Nil~~~~--~~~kL~Dfg~a~~~~~ 153 (333)
T cd05600 115 DALHELGYIHRDLKPENFLIDAS--GHIKLTDFGLSKGIVT 153 (333)
T ss_pred HHHHHCCccccCCCHHHEEECCC--CCEEEEeCcCCccccc
Confidence 88999999999999999999865 8999999999876543
No 48
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.46 E-value=2.5e-13 Score=152.67 Aligned_cols=141 Identities=17% Similarity=0.205 Sum_probs=95.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.+ +|+.||||+.+..-. ... +... .+..|.
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~--------------------------~~~~------~~~~e~ 52 (360)
T cd05627 7 KVIGRGAFGEVRLVQKKDTGHIYAMKILRKADM--LEK--------------------------EQVA------HIRAER 52 (360)
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHH--hhh--------------------------hhHH------HHHHHH
Confidence 67999999999999976 799999998763210 000 0001 122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..+.++.+ + .+++++. ....+|||||++|.+|.++... ...+....+...+.+++
T Consensus 53 ~~l~~l~~------------------~--~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~ 111 (360)
T cd05627 53 DILVEADG------------------A--WVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMK-KDTLSEEATQFYIAETV 111 (360)
T ss_pred HHHHhCCC------------------C--CEeeEEEEEEcCCEEEEEEeCCCCccHHHHHHh-cCCCCHHHHHHHHHHHH
Confidence 33333211 1 2333332 4567899999999999887532 23345444444444433
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+..+|..|++|||+||+|||++.+ |.++|+|||++..+...
T Consensus 112 ~~L~~lH~~givHrDLkp~NIli~~~--~~vkL~DfG~~~~~~~~ 154 (360)
T cd05627 112 LAIDAIHQLGFIHRDIKPDNLLLDAK--GHVKLSDFGLCTGLKKA 154 (360)
T ss_pred HHHHHHHHCCeEccCCCHHHEEECCC--CCEEEeeccCCcccccc
Confidence 788999999999999999999865 89999999998876543
No 49
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.46 E-value=2.8e-13 Score=149.96 Aligned_cols=138 Identities=14% Similarity=0.087 Sum_probs=91.8
Q ss_pred ccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 12 PLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 12 plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
.||+|++|.||+|+.+ +|+.||||+.+...... ..+ ...+.+|.+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~---------------------------------~~~~~~e~~ 47 (323)
T cd05571 2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIA-KDE---------------------------------VAHTLTESR 47 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hHH---------------------------------HHHHHHHHH
Confidence 5899999999999975 79999999876421100 000 001233555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
.+.++.+ +. +.+-..+. ....+|||||++|.+|.+.... ........+...+.+++ +
T Consensus 48 ~l~~l~h------------------p~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~L 108 (323)
T cd05571 48 VLQNTRH------------------PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR-ERVFSEDRARFYGAEIVSAL 108 (323)
T ss_pred HHHhCCC------------------CCCCCEEEEEEcCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHH
Confidence 5444422 11 11222222 4567899999999999766432 22344444444444433 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
..+|..|++|||+||.||+++.+ +.++|+|||+++.
T Consensus 109 ~~lH~~~ivHrDlkp~NIll~~~--~~~kl~DfG~a~~ 144 (323)
T cd05571 109 GYLHSCDVVYRDLKLENLMLDKD--GHIKITDFGLCKE 144 (323)
T ss_pred HHHHhCCeEeCCCCHHHEEECCC--CCEEEeeCCCCcc
Confidence 88999999999999999999865 8999999998864
No 50
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.45 E-value=2.3e-13 Score=154.21 Aligned_cols=139 Identities=14% Similarity=0.129 Sum_probs=92.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.+ +|+.||||+.+.... .. .+... .+.+|.
T Consensus 7 ~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~--~~--------------------------~~~~~------~~~~E~ 52 (381)
T cd05626 7 KTLGIGAFGEVCLACKVDTHALYAMKTLRKKDV--LN--------------------------RNQVA------HVKAER 52 (381)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHh--hh--------------------------hHHHH------HHHHHH
Confidence 56999999999999975 799999998753110 00 00000 133444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHH-
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA- 164 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~- 164 (864)
..+.++.+ + .|.+++. ....+|||||++|++|.++... ........+...+.++
T Consensus 53 ~il~~l~h------------------~--~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~~~e~~~~~~~~qi~ 111 (381)
T cd05626 53 DILAEADN------------------E--WVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIR-MEVFPEVLARFYIAELT 111 (381)
T ss_pred HHHHhcCC------------------C--CeeeeEEEEecCCEEEEEEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHH
Confidence 44444322 1 2333332 4567899999999999877532 2233433333333333
Q ss_pred -HHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 165 -YAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 165 -~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.+..+|..||+|||+||.|||++.+ ++++|+|||++..+.
T Consensus 112 ~aL~~LH~~givHrDlKp~Nili~~~--~~~kL~DFGl~~~~~ 152 (381)
T cd05626 112 LAIESVHKMGFIHRDIKPDNILIDLD--GHIKLTDFGLCTGFR 152 (381)
T ss_pred HHHHHHHhCCeeecCCcHHHEEECCC--CCEEEeeCcCCcccc
Confidence 2788999999999999999999865 899999999987654
No 51
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.45 E-value=2.9e-13 Score=150.26 Aligned_cols=140 Identities=14% Similarity=0.099 Sum_probs=93.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.+ +|+.||||+.++..... ..+ ...+.+|.
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-~~~---------------------------------~~~~~~E~ 46 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIA-KDE---------------------------------VAHTLTES 46 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hhH---------------------------------HHHHHHHH
Confidence 35899999999999976 79999999976432100 000 01133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCE-EEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v-~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
+.+.++.+ +.+ .+-..+. ....+|||||++|.+|.+.... ...+....+...+.+++
T Consensus 47 ~~l~~l~h------------------p~iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~a 107 (328)
T cd05593 47 RVLKNTRH------------------PFLTSLKYSFQTKDRLCFVMEYVNGGELFFHLSR-ERVFSEDRTRFYGAEIVSA 107 (328)
T ss_pred HHHHhCCC------------------CCCcceEEEEEcCCEEEEEEeCCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHH
Confidence 54444322 111 1112222 4567899999999999765432 22345555544444443
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+..+|..|++|||+||.|||++.+ +.++|+|||+++..
T Consensus 108 L~~LH~~~ivHrDikp~NIll~~~--~~~kL~DfG~~~~~ 145 (328)
T cd05593 108 LDYLHSGKIVYRDLKLENLMLDKD--GHIKITDFGLCKEG 145 (328)
T ss_pred HHHHHhCCeEecccCHHHeEECCC--CcEEEecCcCCccC
Confidence 788999999999999999999865 89999999998753
No 52
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.45 E-value=4.1e-13 Score=145.71 Aligned_cols=144 Identities=15% Similarity=0.133 Sum_probs=97.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|..+ +|+.||||+.+....... ..+..+.+|.
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~----------------------------------~~~~~~~~E~ 51 (285)
T cd05631 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKR----------------------------------KGEAMALNEK 51 (285)
T ss_pred EEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhh----------------------------------hhHHHHHHHH
Confidence 67999999999999975 899999998654321110 0111244566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHh-hcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~l~~~~~~~~-- 165 (864)
+.+.++.+. ..+.+...+. ....+++|||++|.+|.+..... ....+...+...+.+++
T Consensus 52 ~il~~l~~~-----------------~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~ 114 (285)
T cd05631 52 RILEKVNSR-----------------FVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCG 114 (285)
T ss_pred HHHHhcCCC-----------------cEEEEEEEEccCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHH
Confidence 665554321 1122223332 45678999999999997664322 12355555555544444
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|||+||.||+++.+ +.++|+|||++..++.
T Consensus 115 l~~lH~~~iiH~dikp~Nill~~~--~~~kl~Dfg~~~~~~~ 154 (285)
T cd05631 115 LEDLQRERIVYRDLKPENILLDDR--GHIRISDLGLAVQIPE 154 (285)
T ss_pred HHHHHhCCEEeCCCCHHHEEECCC--CCEEEeeCCCcEEcCC
Confidence 788999999999999999999865 8999999999887643
No 53
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=99.45 E-value=2.8e-12 Score=131.45 Aligned_cols=183 Identities=21% Similarity=0.245 Sum_probs=131.0
Q ss_pred ccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHHH
Q 002927 12 PLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAEN 91 (864)
Q Consensus 12 plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~n 91 (864)
+|.+|--+.||+|...+++.|||||.+......-..+- .+..-.+......+...++..|.+ .|.+|
T Consensus 55 ~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~----Yi~gd~Rf~~~~~~rr~lv~~W~~---------kEf~N 121 (268)
T COG1718 55 CISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRR----YIQGDPRFRNSRSNRRKLVFAWAR---------KEFRN 121 (268)
T ss_pred eecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHH----HHhcChhhhcCCCCHHHHHHHHHH---------HHHHH
Confidence 78899999999999888999999999876654322111 111111111123366666666664 49999
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCc-----CCCChHHHhhcCCCHHHHHHHHHHHHH
Q 002927 92 TRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGI-----RLNDCESLEAFGVNKQKVVEEITRAYA 166 (864)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~-----~L~~~~~~~~~~~~~~~l~~~~~~~~l 166 (864)
+.++.+. +|.||+++..-+.||+||||... .|.|+.. ...+.+.+...+++.+-
T Consensus 122 L~R~~eA------------------GVrvP~Pi~~~~nVLvMEfIg~~g~pAP~LkDv~~---e~~e~~~~~~~~v~~~~ 180 (268)
T COG1718 122 LKRAYEA------------------GVRVPEPIAFRNNVLVMEFIGDDGLPAPRLKDVPL---ELEEAEGLYEDVVEYMR 180 (268)
T ss_pred HHHHHHc------------------CCCCCCceeecCCeEEEEeccCCCCCCCCcccCCc---CchhHHHHHHHHHHHHH
Confidence 9998763 68999999999999999999543 2333210 00024455566666655
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHHHHHHHHHHHHHhCCHHHHHHHHHHcCCC
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLR 238 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~G~~ 238 (864)
.++...|++|+||..-|||+. + +.+++||||.+..+....-.. ++.+|...+...|...|+.
T Consensus 181 ~l~~~a~LVHgDLSEyNiL~~-~--~~p~iID~~QaV~~~hp~a~e-------~L~RDv~Ni~~fF~r~gv~ 242 (268)
T COG1718 181 RLYKEAGLVHGDLSEYNILVH-D--GEPYIIDVSQAVTIDHPNAFE-------FLERDVRNIARFFRRKGVE 242 (268)
T ss_pred HHHHhcCcccccchhhheEEE-C--CeEEEEECccccccCCCchHH-------HHHHHHHHHHHHHHHcCCC
Confidence 555669999999999999998 3 799999999998887554433 4789999999999999985
No 54
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.44 E-value=3.4e-13 Score=149.36 Aligned_cols=138 Identities=14% Similarity=0.138 Sum_probs=92.3
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +++.||||+.+...... ..+.+ .+..|.
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-~~~~~---------------------------------~~~~e~ 51 (324)
T cd05587 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQ-DDDVE---------------------------------CTMVEK 51 (324)
T ss_pred EEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHHH---------------------------------HHHHHH
Confidence 67999999999999976 68899999876432100 00000 122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+..+.+ .-.++.++ . ....++||||++|.+|.+.... ........+...+.+++
T Consensus 52 ~~l~~~~~-------------------~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~-~~~~~~~~~~~~~~qi~ 111 (324)
T cd05587 52 RVLALPGK-------------------PPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQ-VGKFKEPHAVFYAAEIA 111 (324)
T ss_pred HHHHhcCC-------------------CCceeeeEEEEEcCCEEEEEEcCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 44433321 11233333 2 4567899999999999766432 22344444444444443
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
+..+|..|++|||+||.|||++.+ +.++|+|||++..
T Consensus 112 ~al~~lH~~~ivH~dlkp~Nill~~~--~~~kL~Dfg~~~~ 150 (324)
T cd05587 112 IGLFFLHSKGIIYRDLKLDNVMLDAE--GHIKIADFGMCKE 150 (324)
T ss_pred HHHHHHHHCCeEecCCCHHHeEEcCC--CCEEEeecCccee
Confidence 788999999999999999999865 8999999998764
No 55
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.44 E-value=4.3e-13 Score=142.05 Aligned_cols=140 Identities=18% Similarity=0.220 Sum_probs=98.8
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||+|++|.||+|...+++.||+|+.+....... +.++.+|++
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~------------------------------------~~~~~~e~~ 44 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQEL------------------------------------KIKFLSEAR 44 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHH------------------------------------HHHHHHHHH
Confidence 46899999999999988899999998765543221 112445666
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
.+.++.+ ++ +.+...+. ....++||||++|.+|.++........+...+...+.++. +
T Consensus 45 ~l~~l~h------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l 106 (250)
T cd05085 45 ILKQYDH------------------PNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGM 106 (250)
T ss_pred HHHhCCC------------------CCcCeEEEEEecCCccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 5555422 11 11222222 4568899999999999887543333455566555555544 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..+|..|++|+|+||+||+++.+ +.++|+|||++....
T Consensus 107 ~~lH~~~~~H~dl~p~nili~~~--~~~~l~d~g~~~~~~ 144 (250)
T cd05085 107 AYLESKNCIHRDLAARNCLVGEN--NVLKISDFGMSRQED 144 (250)
T ss_pred HHHHhCCeeecccChheEEEcCC--CeEEECCCccceecc
Confidence 78899999999999999999865 889999999886543
No 56
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.44 E-value=2.5e-13 Score=150.13 Aligned_cols=139 Identities=19% Similarity=0.184 Sum_probs=91.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.+ +|+.||||+.++..... +-. .+ .+..|.
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~---~~~-------------------------~~------~~~~e~ 46 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQ---DDD-------------------------VE------CTMTEK 46 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhh---ccH-------------------------HH------HHHHHH
Confidence 35899999999999986 78999999876432100 000 00 012233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+..... ++ .|++++ . ....+|||||++|.+|.+.... ....+...+...+.+++
T Consensus 47 ~~l~~~~~-----------------h~--~iv~~~~~~~~~~~~~iv~Ey~~~g~L~~~i~~-~~~l~~~~~~~~~~ql~ 106 (320)
T cd05590 47 RILSLARN-----------------HP--FLTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQK-SRRFDEARARFYAAEIT 106 (320)
T ss_pred HHHHhccC-----------------CC--chhceeeEEEcCCEEEEEEcCCCCchHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 33222210 11 222332 2 4557899999999999776432 23455555544444443
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+..+|..|++|||+||+|||++.+ +.++|+|||++...
T Consensus 107 ~~L~~lH~~~ivH~dlkp~NIli~~~--~~~kL~DfG~~~~~ 146 (320)
T cd05590 107 SALMFLHDKGIIYRDLKLDNVLLDHE--GHCKLADFGMCKEG 146 (320)
T ss_pred HHHHHHHHCCeEeCCCCHHHeEECCC--CcEEEeeCCCCeec
Confidence 788999999999999999999865 89999999998753
No 57
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.44 E-value=4.2e-13 Score=149.01 Aligned_cols=143 Identities=19% Similarity=0.137 Sum_probs=95.3
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+..-.. +.+ .. -.+.+|+
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~----~~~------------------------~~------~~~~~E~ 69 (329)
T PTZ00263 24 ETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREIL----KMK------------------------QV------QHVAQEK 69 (329)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHh----hhh------------------------hH------HHHHHHH
Confidence 78999999999999986 7999999987632100 000 00 0134455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
..+.++.+. .-+.+-..+. ....+++|||++|.+|.+.... ........+...+.+++ +
T Consensus 70 ~~l~~l~hp-----------------~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL 131 (329)
T PTZ00263 70 SILMELSHP-----------------FIVNMMCSFQDENRVYFLLEFVVGGELFTHLRK-AGRFPNDVAKFYHAELVLAF 131 (329)
T ss_pred HHHHhCCCC-----------------CCCcEEEEEEcCCEEEEEEcCCCCChHHHHHHH-cCCCCHHHHHHHHHHHHHHH
Confidence 555554321 0112222222 5667899999999999876532 22334333333333333 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+|..|++|||+||.|||++.+ +.++|+|||++..+..
T Consensus 132 ~~LH~~~ivH~dlkp~NIll~~~--~~~kl~Dfg~~~~~~~ 170 (329)
T PTZ00263 132 EYLHSKDIIYRDLKPENLLLDNK--GHVKVTDFGFAKKVPD 170 (329)
T ss_pred HHHHHCCeeecCCCHHHEEECCC--CCEEEeeccCceEcCC
Confidence 88999999999999999999865 8999999999987754
No 58
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.44 E-value=4.8e-13 Score=151.28 Aligned_cols=141 Identities=14% Similarity=0.138 Sum_probs=91.6
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.. +|+.||||+.+..- .. . .+... .+.+|.
T Consensus 7 ~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~-------~~--~-------------------~~~~~------~~~~E~ 52 (376)
T cd05598 7 KTIGIGAFGEVCLVRKVDTNALYAMKTLRKAD-------VL--M-------------------RNQAA------HVKAER 52 (376)
T ss_pred EEEEeCCCeEEEEEEECCCCCEEEEEEEcHHH-------HH--h-------------------hhhHH------HHHHHH
Confidence 67999999999999976 79999999865311 00 0 00001 133344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
+.+.++.+. .-+.+-..+. ....+|||||++|++|.++... ...+....+...+.+++ +
T Consensus 53 ~il~~l~h~-----------------~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~-~~~~~~~~~~~~~~qi~~al 114 (376)
T cd05598 53 DILAEADNE-----------------WVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIR-LGIFEEDLARFYIAELTCAI 114 (376)
T ss_pred HHHHhCCCC-----------------CcceEEEEEEcCCEEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHH
Confidence 444443221 0112222222 5667899999999999887532 22233333333333332 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
..+|..||+|||+||+|||++.+ +.++|+|||++..+
T Consensus 115 ~~lH~~~ivHrDlkp~Nill~~~--~~ikL~DFG~a~~~ 151 (376)
T cd05598 115 ESVHKMGFIHRDIKPDNILIDRD--GHIKLTDFGLCTGF 151 (376)
T ss_pred HHHHHCCeEeCCCCHHHEEECCC--CCEEEEeCCCCccc
Confidence 88999999999999999999865 89999999998655
No 59
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.44 E-value=6.1e-13 Score=141.17 Aligned_cols=138 Identities=17% Similarity=0.211 Sum_probs=95.9
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+++ +|+.||||+.+........ -++.+|.
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~------------------------------------~~~~~e~ 44 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLK------------------------------------AKFLQEA 44 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHH------------------------------------HHHHHHH
Confidence 46899999999999986 8999999986543322111 1133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+.++.+ + .+.+++ . ....+|||||++|.+|.++........+...+...+.+++
T Consensus 45 ~~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~ 104 (252)
T cd05084 45 RILKQYSH------------------P--NIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAA 104 (252)
T ss_pred HHHHhCCC------------------C--CcceEEEEEcCCCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHH
Confidence 44444322 1 122333 2 4567899999999999887543333355555555554444
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|+|+||+||+++.+ +.++|+|||++..+.
T Consensus 105 ~~L~~lH~~~i~H~dl~p~nil~~~~--~~~kl~dfg~~~~~~ 145 (252)
T cd05084 105 AGMEYLESKHCIHRDLAARNCLVTEK--NVLKISDFGMSREEE 145 (252)
T ss_pred HHHHHHHhCCccccccchheEEEcCC--CcEEECccccCcccc
Confidence 678899999999999999999865 889999999987654
No 60
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.43 E-value=3.9e-13 Score=148.80 Aligned_cols=139 Identities=14% Similarity=0.115 Sum_probs=92.4
Q ss_pred ccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 12 PLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 12 plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
.||+|++|.||+|+.+ +|+.||+|+.+...... ..+ ...+..|.+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~---------------------------------~~~~~~E~~ 47 (323)
T cd05595 2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIA-KDE---------------------------------VAHTVTESR 47 (323)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hHH---------------------------------HHHHHHHHH
Confidence 5899999999999975 79999999876432100 000 001233555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AH 167 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~ 167 (864)
.+.++.+.+ -+.+-..+. ....+|||||++|.+|.+.... ........+...+.+++ +.
T Consensus 48 ~l~~l~hp~-----------------i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~ 109 (323)
T cd05595 48 VLQNTRHPF-----------------LTALKYAFQTHDRLCFVMEYANGGELFFHLSR-ERVFTEERARFYGAEIVSALE 109 (323)
T ss_pred HHHhCCCCC-----------------CcceeeEEecCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHH
Confidence 544443210 111222222 4567899999999998765432 22345555554444444 78
Q ss_pred HHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 168 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 168 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
.+|..|++|||+||.|||++.+ +.++|+|||++..
T Consensus 110 ~LH~~~ivH~Dlkp~NIll~~~--~~~kL~Dfg~~~~ 144 (323)
T cd05595 110 YLHSRDVVYRDIKLENLMLDKD--GHIKITDFGLCKE 144 (323)
T ss_pred HHHHCCeEecCCCHHHEEEcCC--CCEEecccHHhcc
Confidence 8999999999999999999865 8999999998765
No 61
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.43 E-value=4e-13 Score=148.56 Aligned_cols=138 Identities=16% Similarity=0.153 Sum_probs=90.2
Q ss_pred ccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 12 PLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 12 plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
.||.|++|+||+|+.+ +|+.||||+.+...... ..+.+ .+..|.+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~---------------------------------~~~~e~~ 47 (321)
T cd05591 2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQ-DDDVD---------------------------------CTMTEKR 47 (321)
T ss_pred ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhh-hhHHH---------------------------------HHHHHHH
Confidence 5899999999999976 68999999876432100 00000 0122333
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH-
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~- 165 (864)
.+.... .++ .|.+++ . ....+|||||++|.+|.+... .........+...+.+++
T Consensus 48 il~~~~-----------------~hp--~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~ 107 (321)
T cd05591 48 ILALAA-----------------KHP--FLTALHCCFQTKDRLFFVMEYVNGGDLMFQIQ-RSRKFDEPRSRFYAAEVTL 107 (321)
T ss_pred HHHhcc-----------------CCC--CccceeeEEEcCCeEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHH
Confidence 322221 111 233333 2 456789999999999876643 222344444444444433
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+..+|+.|++|||+||.||+++.+ +.++|+|||++...
T Consensus 108 aL~~LH~~~ivHrDikp~Nill~~~--~~~kL~Dfg~~~~~ 146 (321)
T cd05591 108 ALMFLHRHGVIYRDLKLDNILLDAE--GHCKLADFGMCKEG 146 (321)
T ss_pred HHHHHHHCCeeccCCCHHHeEECCC--CCEEEeecccceec
Confidence 788999999999999999999865 89999999988653
No 62
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.43 E-value=6.4e-13 Score=147.20 Aligned_cols=138 Identities=14% Similarity=0.113 Sum_probs=91.5
Q ss_pred ccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 12 PLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 12 plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
.||+|++|+||+|+.+ +|+.||||+.++..... ..+ ...+..|.+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~-~~~---------------------------------~~~~~~e~~ 47 (325)
T cd05594 2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA-KDE---------------------------------VAHTLTENR 47 (325)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hhH---------------------------------HHHHHHHHH
Confidence 5899999999999975 89999999976422100 000 001233444
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCE-EEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v-~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
.+..+.+ +.+ .+-..+. ....+|||||++|.+|.+... ....+....+...+.+++ +
T Consensus 48 ~l~~~~h------------------p~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~-~~~~l~~~~~~~~~~qi~~aL 108 (325)
T cd05594 48 VLQNSRH------------------PFLTALKYSFQTHDRLCFVMEYANGGELFFHLS-RERVFSEDRARFYGAEIVSAL 108 (325)
T ss_pred HHHhCCC------------------CCCCceEEEEEcCCEEEEEEeCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHH
Confidence 4444322 111 1112222 456789999999999876543 222345555555444444 7
Q ss_pred HHHHh-cCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 167 HQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 167 ~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
..+|. .|++|||+||.|||++.+ +.++|+|||++..
T Consensus 109 ~~lH~~~~ivHrDikp~NIll~~~--~~~kL~Dfg~~~~ 145 (325)
T cd05594 109 DYLHSEKNVVYRDLKLENLMLDKD--GHIKITDFGLCKE 145 (325)
T ss_pred HHHHhcCCEEecCCCCCeEEECCC--CCEEEecCCCCee
Confidence 88897 799999999999999865 8999999999865
No 63
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.43 E-value=5.1e-13 Score=149.77 Aligned_cols=141 Identities=21% Similarity=0.290 Sum_probs=94.6
Q ss_pred cccccc-cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhh
Q 002927 5 FMDFVE-TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKE 82 (864)
Q Consensus 5 F~~fd~-~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~E 82 (864)
|.+++. +.||.|++|.||+|+.+ +|+.||||+.+........ .
T Consensus 73 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~------------------------------~----- 117 (353)
T PLN00034 73 LSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVR------------------------------R----- 117 (353)
T ss_pred HHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHH------------------------------H-----
Confidence 444543 68999999999999976 7999999997654322111 0
Q ss_pred ccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHH---HHH
Q 002927 83 LDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQ---KVV 158 (864)
Q Consensus 83 ld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~---~l~ 158 (864)
.+.+|++.+.++.+. .-+.+-.++. ....+++|||++|.+|.+... .... .++
T Consensus 118 -~~~~E~~~l~~l~h~-----------------~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~-----~~~~~~~~i~ 174 (353)
T PLN00034 118 -QICREIEILRDVNHP-----------------NVVKCHDMFDHNGEIQVLLEFMDGGSLEGTHI-----ADEQFLADVA 174 (353)
T ss_pred -HHHHHHHHHHhCCCC-----------------CcceeeeEeccCCeEEEEEecCCCCccccccc-----CCHHHHHHHH
Confidence 133455555544321 0122222222 456789999999999876421 1222 233
Q ss_pred HHHHHHHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 159 EEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 159 ~~~~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..++.. +..+|..|++|+|+||.|||++.+ +.++|+|||++..+.
T Consensus 175 ~qi~~a-L~~LH~~~ivHrDlkp~NIll~~~--~~~kL~DfG~~~~~~ 219 (353)
T PLN00034 175 RQILSG-IAYLHRRHIVHRDIKPSNLLINSA--KNVKIADFGVSRILA 219 (353)
T ss_pred HHHHHH-HHHHHHCCEeecCCCHHHEEEcCC--CCEEEcccccceecc
Confidence 333333 778999999999999999999865 899999999987654
No 64
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.43 E-value=9.6e-14 Score=142.05 Aligned_cols=144 Identities=18% Similarity=0.195 Sum_probs=99.2
Q ss_pred cccccccceeeEEEEe-cCCCEEEEEEec-CChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 11 TPLATASIAQVHRATL-VDGRQVVVKVQH-QGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 11 ~plasaSigqV~~A~l-~~G~~VAVKv~~-p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
+-||.||||.||++.. .+|..||.|-.. -.+. ..-+..+..|++..+.
T Consensus 25 ~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md------------------------------~k~rq~~v~Ei~lLkQ 74 (375)
T KOG0591|consen 25 KKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMD------------------------------AKARQDCVKEISLLKQ 74 (375)
T ss_pred HHHcCCcchheEEeeeccCcchhhhhhcchhhcc------------------------------HHHHHHHHHHHHHHHh
Confidence 6799999999999995 499999999322 1111 1222334455665555
Q ss_pred HH--HHHHHHH-HhCCCCCCCCCCCCCCCCCCEEEeeEEecCC-ceEEEeecCCcCCCChHHHh---hcCCCHHHHHHHH
Q 002927 89 AE--NTRIVSA-NLGCKNKHEDSNKKPAYEVDVLIPEVIQSSE-TVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEI 161 (864)
Q Consensus 89 a~--n~~~~~~-~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~-~vLvmE~i~G~~L~~~~~~~---~~~~~~~~l~~~~ 161 (864)
.+ |+.++.+ .|- ...+ ..||||+|++++|++..+-- +.-+..+.+.+.+
T Consensus 75 L~HpNIVqYy~~~f~------------------------~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f 130 (375)
T KOG0591|consen 75 LNHPNIVQYYAHSFI------------------------EDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYF 130 (375)
T ss_pred cCCchHHHHHHHhhh------------------------ccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHH
Confidence 54 4444433 221 1122 35899999999999876532 2234556677777
Q ss_pred HHHH--HHHHHh--cC--eeccCCCCCCeEEccCCCCceEEEecccccccChHHH
Q 002927 162 TRAY--AHQIYV--DG--FFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMK 210 (864)
Q Consensus 162 ~~~~--l~~i~~--~G--~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r 210 (864)
++++ +..+|. .. ++|||+||+||+++.. |.++|.|||+++.++.+..
T Consensus 131 ~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~--gvvKLGDfGL~r~l~s~~t 183 (375)
T KOG0591|consen 131 VQLCRALYHCHSKIPRGTVMHRDIKPANIFLTAN--GVVKLGDFGLGRFLSSKTT 183 (375)
T ss_pred HHHHHHHHHHhccccccceeeccCcchheEEcCC--CceeeccchhHhHhcchhH
Confidence 7766 556665 44 9999999999999965 8999999999999886543
No 65
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.43 E-value=3e-13 Score=147.36 Aligned_cols=140 Identities=19% Similarity=0.176 Sum_probs=93.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+....-... .+ ..-.+.+|.
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~----~~------------------------------~~~~~~~E~ 52 (291)
T cd05612 7 KTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIR----LK------------------------------QEQHVHNEK 52 (291)
T ss_pred eeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhh----hH------------------------------HHHHHHHHH
Confidence 67999999999999976 79999999875321100 00 000123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..+.++.+ ..|.+++. ....++||||++|.+|.++... ........+...+.+++
T Consensus 53 ~~l~~l~h--------------------p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~ 111 (291)
T cd05612 53 RVLKEVSH--------------------PFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRN-SGRFSNSTGLFYASEIV 111 (291)
T ss_pred HHHHhCCC--------------------CcHhhhHhhhccCCeEEEEEeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 33333321 11222222 3456899999999999877542 22344444444444433
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|+||.||+++.+ |.++|+|||++..+..
T Consensus 112 ~~l~~lH~~~i~H~dlkp~NIli~~~--~~~kl~Dfg~~~~~~~ 153 (291)
T cd05612 112 CALEYLHSKEIVYRDLKPENILLDKE--GHIKLTDFGFAKKLRD 153 (291)
T ss_pred HHHHHHHHCCeeecCCCHHHeEECCC--CCEEEEecCcchhccC
Confidence 788999999999999999999865 8999999999876643
No 66
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.43 E-value=4.9e-13 Score=148.34 Aligned_cols=141 Identities=18% Similarity=0.244 Sum_probs=95.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+...... . +..+ .+..|.
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~--~--------------------------~~~~------~~~~e~ 52 (330)
T cd05601 7 SLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLA--Q--------------------------ETVS------FFEEER 52 (330)
T ss_pred EEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhh--h--------------------------hHHH------HHHHHH
Confidence 67999999999999976 79999999876421100 0 0000 122343
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..+..+.+ ..+++++ . ....+|||||++|.+|.++.......+....+...+.+++
T Consensus 53 ~i~~~~~~--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~ 112 (330)
T cd05601 53 DILSISNS--------------------PWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELV 112 (330)
T ss_pred HHHHhCCC--------------------CCCcceeeEEecCCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 33333211 1223332 2 4567899999999999887653323455554444444433
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|||+||.||+++.+ +.++|+|||++..+..
T Consensus 113 ~aL~~lH~~~i~H~Dlkp~NIll~~~--~~~kL~Dfg~a~~~~~ 154 (330)
T cd05601 113 LAIHSVHQMGYVHRDIKPENVLIDRT--GHIKLADFGSAARLTA 154 (330)
T ss_pred HHHHHHHHCCeEcccCchHheEECCC--CCEEeccCCCCeECCC
Confidence 788999999999999999999865 8999999999987654
No 67
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.43 E-value=1.7e-13 Score=152.73 Aligned_cols=137 Identities=18% Similarity=0.309 Sum_probs=97.9
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
++||-|.||.|..++-. +...+|.|.+|. .|+ +.+.-...+..|-|...||
T Consensus 635 k~iGvGAFGeV~Lv~KvDT~~lYAmKTLrK-------aDV---------------------l~rnQvaHVKAERDILAEA 686 (1034)
T KOG0608|consen 635 KTIGVGAFGEVCLVRKVDTRALYAMKTLRK-------ADV---------------------LMRNQVAHVKAERDILAEA 686 (1034)
T ss_pred eeecccccceeEEEeecchhhHHHHhhhHH-------HHH---------------------HhhhhhhhhhhhhhhHhhc
Confidence 78999999999999854 445568885431 121 1111222345666777776
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITR-- 163 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~-- 163 (864)
.| . .|-++|+ ....|.||+||+|+++-.+ +-+.|+=++.+++-.+.
T Consensus 687 Dn-------------------------~-WVVrLyySFQDkdnLYFVMdYIPGGDmMSL--LIrmgIFeE~LARFYIAEl 738 (1034)
T KOG0608|consen 687 DN-------------------------E-WVVRLYYSFQDKDNLYFVMDYIPGGDMMSL--LIRMGIFEEDLARFYIAEL 738 (1034)
T ss_pred CC-------------------------c-ceEEEEEEeccCCceEEEEeccCCccHHHH--HHHhccCHHHHHHHHHHHH
Confidence 43 1 2345554 4567899999999998776 34567767777765443
Q ss_pred -HHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 164 -AYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 164 -~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+.++.+|.-||||||+||.||||+.| |.|+|.|||++.-+
T Consensus 739 tcAiesVHkmGFIHRDiKPDNILIDrd--GHIKLTDFGLCTGf 779 (1034)
T KOG0608|consen 739 TCAIESVHKMGFIHRDIKPDNILIDRD--GHIKLTDFGLCTGF 779 (1034)
T ss_pred HHHHHHHHhccceecccCccceEEccC--Cceeeeeccccccc
Confidence 33888999999999999999999976 99999999998754
No 68
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.43 E-value=4.2e-13 Score=148.63 Aligned_cols=139 Identities=14% Similarity=0.126 Sum_probs=92.4
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.+ +|+.||||+.+...... ..+. -.+..|.
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~---------------------------------~~~~~e~ 51 (323)
T cd05615 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQ-DDDV---------------------------------ECTMVEK 51 (323)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHH---------------------------------HHHHHHH
Confidence 67999999999999976 79999999876321100 0000 0122343
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+..+.+ ++ .+++++ . ....+|||||++|.+|.+.... ...+....+...+.+++
T Consensus 52 ~~l~~~~~-----------------~~--~i~~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~-~~~l~~~~~~~i~~qi~ 111 (323)
T cd05615 52 RVLALQDK-----------------PP--FLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQ-VGKFKEPQAVFYAAEIS 111 (323)
T ss_pred HHHHhccC-----------------CC--chhheeeEEecCCEEEEEEcCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 33332211 11 122222 2 3457899999999998776432 23345555555544444
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+..+|..|++|||+||+||+++.+ +.++|+|||++...
T Consensus 112 ~al~~lH~~~ivHrDikp~Nill~~~--~~ikL~Dfg~~~~~ 151 (323)
T cd05615 112 VGLFFLHRRGIIYRDLKLDNVMLDSE--GHIKIADFGMCKEH 151 (323)
T ss_pred HHHHHHHHCCeeccCCCHHHeEECCC--CCEEEecccccccc
Confidence 788999999999999999999865 89999999988653
No 69
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.42 E-value=7.3e-13 Score=147.18 Aligned_cols=141 Identities=16% Similarity=0.105 Sum_probs=92.9
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|.||+++.+ +++.||||+....-... .. ....+..|.
T Consensus 7 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~-~~---------------------------------~~~~~~~e~ 52 (331)
T cd05624 7 KVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLK-RA---------------------------------ETACFREER 52 (331)
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHh-hH---------------------------------HHHHHHHHH
Confidence 67999999999999976 78999999865310000 00 000122233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..+..+. ++ .|..++ . ....+|||||++|++|.++.......+....+...+.+++
T Consensus 53 ~~l~~~~------------------~~--~i~~l~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~ 112 (331)
T cd05624 53 NVLVNGD------------------CQ--WITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMV 112 (331)
T ss_pred HHHHhCC------------------CC--CEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 2222221 11 233333 2 4567899999999999987653233444444443333333
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
++.+|..|++|||+||+|||++.+ +.++|+|||++..+..
T Consensus 113 ~~L~~lH~~~iiHrDlkp~Nill~~~--~~~kl~DfG~a~~~~~ 154 (331)
T cd05624 113 LAIHSIHQLHYVHRDIKPDNVLLDMN--GHIRLADFGSCLKMNQ 154 (331)
T ss_pred HHHHHHHHCCeeeccCchHHEEEcCC--CCEEEEeccceeeccC
Confidence 788999999999999999999865 8999999999877654
No 70
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.42 E-value=7.9e-13 Score=149.90 Aligned_cols=138 Identities=15% Similarity=0.161 Sum_probs=91.4
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.+ +++.||||+.+..-. .. .+... .+.+|.
T Consensus 7 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~--~~--------------------------~~~~~------~~~~E~ 52 (382)
T cd05625 7 KTLGIGAFGEVCLARKVDTKALYAMKTLRKKDV--LL--------------------------RNQVA------HVKAER 52 (382)
T ss_pred EEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHh--hh--------------------------HHHHH------HHHHHH
Confidence 67999999999999976 799999998653110 00 00000 133344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+.++.+ + .|.+++. ....+|||||++|++|.++... ........+...+.+++
T Consensus 53 ~il~~~~h------------------~--~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~~~e~~~~~~~~qi~ 111 (382)
T cd05625 53 DILAEADN------------------E--WVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIR-MGIFPEDLARFYIAELT 111 (382)
T ss_pred HHHHhCCC------------------C--cCCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHH
Confidence 44444322 1 2333332 4567899999999999876432 22233333333333333
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+..+|..||+|||+||.|||++.+ |.++|+|||++..+
T Consensus 112 ~al~~lH~~~ivHrDlKp~NILl~~~--g~~kL~DFGla~~~ 151 (382)
T cd05625 112 CAVESVHKMGFIHRDIKPDNILIDRD--GHIKLTDFGLCTGF 151 (382)
T ss_pred HHHHHHHhCCeecCCCCHHHEEECCC--CCEEEeECCCCccc
Confidence 788999999999999999999865 89999999998654
No 71
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.42 E-value=1.6e-13 Score=150.12 Aligned_cols=152 Identities=17% Similarity=0.232 Sum_probs=103.0
Q ss_pred cccccccccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHh
Q 002927 3 GMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPK 81 (864)
Q Consensus 3 ~~F~~fd~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~ 81 (864)
.+|.-|.++.||||-||.||-|+.+ +|+.|||||...- + +. ...
T Consensus 562 tvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKl-------------------r-Fp---------------~kq 606 (888)
T KOG4236|consen 562 TVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKL-------------------R-FP---------------TKQ 606 (888)
T ss_pred HHHHhhhHhhccCCcceeeecceecccCceeeeeeeecc-------------------c-CC---------------Cch
Confidence 4667788899999999999999975 9999999985310 0 00 012
Q ss_pred hccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCE-EEeeEEecCC-ceEEEeecCCcCCCChHHHhhcCCCHHHHHH
Q 002927 82 ELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQSSE-TVLILEFMDGIRLNDCESLEAFGVNKQKVVE 159 (864)
Q Consensus 82 Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v-~vP~v~~~~~-~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~ 159 (864)
|-.+++|..-++.+. ++.+ .+-..+++.+ .+.|||-+.|.-|+-++..++..+. +++-+
T Consensus 607 esqlR~EVaILq~l~------------------HPGiV~le~M~ET~ervFVVMEKl~GDMLEMILSsEkgRL~-er~Tk 667 (888)
T KOG4236|consen 607 ESQLRNEVAILQNLH------------------HPGIVNLECMFETPERVFVVMEKLHGDMLEMILSSEKGRLP-ERITK 667 (888)
T ss_pred HHHHHHHHHHHHhcC------------------CCCeeEEEEeecCCceEEEEehhhcchHHHHHHHhhcccch-HHHHH
Confidence 223455655555543 2333 3334444444 4579999999888776654443332 33322
Q ss_pred H---HHHHHHHHHHhcCeeccCCCCCCeEEccCCC-CceEEEecccccccChH
Q 002927 160 E---ITRAYAHQIYVDGFFNGDPHPGNFLVSKDPP-HRPILLDFGLTKKLSSS 208 (864)
Q Consensus 160 ~---~~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~-g~i~LiDFG~~~~l~~~ 208 (864)
- .+-..++.+|..+|+||||||+|||+....+ -+++|+|||.++.+.+.
T Consensus 668 FlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEk 720 (888)
T KOG4236|consen 668 FLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEK 720 (888)
T ss_pred HHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchh
Confidence 2 2223388889999999999999999975422 57999999999998764
No 72
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.42 E-value=7.6e-13 Score=147.06 Aligned_cols=141 Identities=16% Similarity=0.155 Sum_probs=93.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.+ +|+.||||+.+..- ... . .... .+..|.
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~--~~~-~-------------------------~~~~------~~~~e~ 52 (331)
T cd05597 7 KVIGRGAFGEVAVVKMKNTGQVYAMKILNKWE--MLK-R-------------------------AETA------CFREER 52 (331)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHH--Hhh-h-------------------------hhHH------HHHHHH
Confidence 67999999999999976 79999999875310 000 0 0000 122343
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..+..+.+ -.|+.++ . ....+|||||++|.+|.++.......+....+...+.+++
T Consensus 53 ~~l~~~~~--------------------~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~ 112 (331)
T cd05597 53 DVLVNGDR--------------------RWITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMV 112 (331)
T ss_pred HHHHhCCC--------------------CCCCceEEEEecCCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 33333211 1223332 2 4567899999999999887643223344444444444333
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|+||.|||++.+ +.++|+|||++..+..
T Consensus 113 ~~l~~lH~~~ivH~dlkp~Nill~~~--~~~kl~Dfg~~~~~~~ 154 (331)
T cd05597 113 LAIDSVHQLGYVHRDIKPDNVLLDKN--GHIRLADFGSCLRLLA 154 (331)
T ss_pred HHHHHHHhCCeEECCCCHHHEEECCC--CCEEEEECCceeecCC
Confidence 788999999999999999999865 8999999999876543
No 73
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.42 E-value=7.6e-13 Score=149.41 Aligned_cols=140 Identities=18% Similarity=0.167 Sum_probs=92.7
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|.||+|+.+ +|+.||+|+........ ..+ .-.+..|.
T Consensus 49 ~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~---------------------------------~~~~~~e~ 94 (370)
T cd05621 49 KVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIK-RSD---------------------------------SAFFWEER 94 (370)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhh---------------------------------HHHHHHHH
Confidence 56999999999999986 78999999864210000 000 00122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
..+..+. ++. +.+-..+. ....++||||++|++|.++.. ....+...+...+.+++
T Consensus 95 ~i~~~~~------------------hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~--~~~~~~~~~~~~~~qil~a 154 (370)
T cd05621 95 DIMAFAN------------------SPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMS--NYDVPEKWAKFYTAEVVLA 154 (370)
T ss_pred HHHHhCC------------------CCCEeeEEEEEEcCCEEEEEEcCCCCCcHHHHHH--hcCCCHHHHHHHHHHHHHH
Confidence 3333322 111 22222222 456789999999999988753 33445444444333333
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|||+||+|||++.+ +.++|+|||++..+.
T Consensus 155 L~~LH~~~IvHrDLKp~NILl~~~--~~~kL~DFG~a~~~~ 193 (370)
T cd05621 155 LDAIHSMGLIHRDVKPDNMLLDKH--GHLKLADFGTCMKMD 193 (370)
T ss_pred HHHHHHCCeEecCCCHHHEEECCC--CCEEEEecccceecc
Confidence 788999999999999999999865 899999999988764
No 74
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.42 E-value=8.6e-13 Score=149.34 Aligned_cols=140 Identities=16% Similarity=0.179 Sum_probs=93.6
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+....- ....+ ... .+.+|.
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~--~~~~~--------------------------~~~------~~~~E~ 52 (377)
T cd05629 7 KVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSE--MFKKD--------------------------QLA------HVKAER 52 (377)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHH--HHHhH--------------------------HHH------HHHHHH
Confidence 67999999999999976 89999999865310 00000 000 133444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+.++.+ + .|++++. ....+|||||++|.+|.++... ...+....+...+.+++
T Consensus 53 ~il~~l~h------------------p--~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~ql~ 111 (377)
T cd05629 53 DVLAESDS------------------P--WVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIK-YDTFSEDVTRFYMAECV 111 (377)
T ss_pred HHHHhCCC------------------C--CcceEEEEEEcCCeeEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHH
Confidence 44444322 1 2333332 4568899999999999876532 22344443333333333
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|||+||.|||++.+ +.++|+|||+++.+..
T Consensus 112 ~aL~~LH~~givHrDlkp~NIll~~~--~~~kl~DfGla~~~~~ 153 (377)
T cd05629 112 LAIEAVHKLGFIHRDIKPDNILIDRG--GHIKLSDFGLSTGFHK 153 (377)
T ss_pred HHHHHHHhCCeeccCCCHHHEEECCC--CCEEEeeccccccccc
Confidence 788999999999999999999865 8999999999976543
No 75
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.42 E-value=6.5e-13 Score=149.45 Aligned_cols=140 Identities=16% Similarity=0.178 Sum_probs=95.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|.||+|+.. +|+.||||+.+..-. .. .+... .+.+|.
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~--------------------------~~~~~------~~~~E~ 52 (364)
T cd05599 7 KVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEM--LE--------------------------KEQVA------HVRAER 52 (364)
T ss_pred EEEEecCCEEEEEEEECCCCCEEEEEEEEHHHh--hh--------------------------hhHHH------HHHHHH
Confidence 67999999999999976 799999998753100 00 00001 123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..+..+.+ ..|++++ . ....+|||||++|.+|.++... ...+....+...+.+++
T Consensus 53 ~il~~l~h--------------------~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~ 111 (364)
T cd05599 53 DILAEADN--------------------PWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMK-KDTFTEEETRFYIAETI 111 (364)
T ss_pred HHHHhCCC--------------------CCCcceEEEEEcCCeEEEEECCCCCcHHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 44443321 1223333 2 4567899999999999887542 23345555544444444
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|||+||+|||++.+ |.++|+|||++..+..
T Consensus 112 ~aL~~lH~~~ivH~Dlkp~NIl~~~~--~~~kl~Dfg~~~~~~~ 153 (364)
T cd05599 112 LAIDSIHKLGYIHRDIKPDNLLLDAK--GHIKLSDFGLCTGLKK 153 (364)
T ss_pred HHHHHHHHCCeEeccCCHHHeEECCC--CCEEEeecccceeccc
Confidence 788999999999999999999865 8999999999887654
No 76
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.42 E-value=5.7e-13 Score=147.03 Aligned_cols=77 Identities=17% Similarity=0.198 Sum_probs=59.4
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
....++||||++|.+|.+.... ....+...+...+.+++ +..+|..|++|||+||.||+++.+ +.++|+|||++.
T Consensus 68 ~~~~~lv~e~~~gg~L~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~--~~~kL~Dfg~a~ 144 (316)
T cd05592 68 KEHLFFVMEYLNGGDLMFHIQS-SGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKD--GHIKIADFGMCK 144 (316)
T ss_pred CCEEEEEEcCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCC--CCEEEccCcCCe
Confidence 4557899999999999776532 23455555544444443 788999999999999999999865 899999999987
Q ss_pred cc
Q 002927 204 KL 205 (864)
Q Consensus 204 ~l 205 (864)
..
T Consensus 145 ~~ 146 (316)
T cd05592 145 EN 146 (316)
T ss_pred EC
Confidence 54
No 77
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.41 E-value=8.1e-13 Score=145.49 Aligned_cols=138 Identities=16% Similarity=0.106 Sum_probs=91.6
Q ss_pred cccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHHH
Q 002927 13 LATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAEN 91 (864)
Q Consensus 13 lasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~n 91 (864)
||+|++|.||+|+.. +|+.||||+.+...... ..+ ...+..|...
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~-~~~---------------------------------~~~~~~E~~~ 46 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVS-RSE---------------------------------VTHTLAERTV 46 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhH---------------------------------HHHHHHHHHH
Confidence 689999999999976 78999999875321000 000 0013345555
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCCCCCEE-EeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HH
Q 002927 92 TRIVSANLGCKNKHEDSNKKPAYEVDVL-IPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AH 167 (864)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~-vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~ 167 (864)
+.++.+ +.+. +-..+. ....+|||||++|.+|.+.... ....+...+...+.+++ +.
T Consensus 47 l~~l~h------------------~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~ 107 (312)
T cd05585 47 LAQVNC------------------PFIVPLKFSFQSPEKLYLVLAFINGGELFHHLQR-EGRFDLSRARFYTAELLCALE 107 (312)
T ss_pred HHhCCC------------------CcEeceeeEEecCCeEEEEEcCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHH
Confidence 544422 1211 112222 4567899999999999876542 23345554444444433 78
Q ss_pred HHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 168 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 168 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
.+|..|++|||+||.|||++.+ +.++|+|||++...
T Consensus 108 ~lH~~~i~HrDlkp~Nili~~~--~~~kl~Dfg~~~~~ 143 (312)
T cd05585 108 NLHKFNVIYRDLKPENILLDYQ--GHIALCDFGLCKLN 143 (312)
T ss_pred HHHhCCeEeCCCCHHHeEECCC--CcEEEEECcccccC
Confidence 8999999999999999999865 89999999998753
No 78
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.41 E-value=1.1e-12 Score=143.49 Aligned_cols=139 Identities=19% Similarity=0.235 Sum_probs=93.8
Q ss_pred ccccccccceeeEEEEec-----------------CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHH
Q 002927 10 ETPLATASIAQVHRATLV-----------------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPII 72 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-----------------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~ 72 (864)
.+.||+|++|.||+|+.. ++..||||+.++.......
T Consensus 10 ~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~-------------------------- 63 (304)
T cd05096 10 KEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNAR-------------------------- 63 (304)
T ss_pred eeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHH--------------------------
Confidence 367999999999999853 2347999998876432211
Q ss_pred HHHHHHhHhhccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHh
Q 002927 73 DEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLE 148 (864)
Q Consensus 73 ~e~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~ 148 (864)
.+|.+|.+.+.++++ +. |.+++. ....+|+|||++|.+|.++....
T Consensus 64 ----------~~~~~E~~~l~~l~h------------------~n--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~ 113 (304)
T cd05096 64 ----------NDFLKEVKILSRLKD------------------PN--IIRLLGVCVDEDPLCMITEYMENGDLNQFLSSH 113 (304)
T ss_pred ----------HHHHHHHHHHhhcCC------------------CC--eeEEEEEEecCCceEEEEecCCCCcHHHHHHhc
Confidence 124456655555432 22 233332 45678999999999998875321
Q ss_pred hc------------------CCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 149 AF------------------GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 149 ~~------------------~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.. .+....+...+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dlkp~Nill~~~--~~~kl~DfG~~~~~~ 189 (304)
T cd05096 114 HLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLVGEN--LTIKIADFGMSRNLY 189 (304)
T ss_pred cccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCcchhheEEcCC--ccEEECCCccceecc
Confidence 10 112223333333333 778999999999999999999865 899999999987654
No 79
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.41 E-value=6.4e-13 Score=147.56 Aligned_cols=140 Identities=19% Similarity=0.189 Sum_probs=92.6
Q ss_pred cccccccceeeEEEEec----CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHH
Q 002927 11 TPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 86 (864)
Q Consensus 11 ~plasaSigqV~~A~l~----~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 86 (864)
+.||+|++|.||+|+.. +|+.||||+.+...... +.. . .-.+.
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~---~~~------------------------~------~~~~~ 52 (332)
T cd05614 6 KVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQ---KAK------------------------T------VEHTR 52 (332)
T ss_pred EEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhh---hhh------------------------H------HHHHH
Confidence 67999999999999863 68999999875321100 000 0 00123
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH
Q 002927 87 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 162 (864)
Q Consensus 87 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~ 162 (864)
.|...+.++++ ++ .|.+++ . ....+|+|||++|.+|.+... ....+....+...+.
T Consensus 53 ~e~~~l~~l~~-----------------~~--~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~~~~~ 112 (332)
T cd05614 53 TERNVLEHVRQ-----------------SP--FLVTLHYAFQTEAKLHLILDYVSGGEMFTHLY-QRDNFSEDEVRFYSG 112 (332)
T ss_pred HHHHHHHhccC-----------------CC--CcccEEEEEecCCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHH
Confidence 34444444321 11 122232 2 455789999999999877653 223455555544444
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+++ +..+|..|++|||+||.|||++.+ +.++|+|||++..+
T Consensus 113 qi~~~l~~lH~~~ivHrDlkp~Nili~~~--~~~kl~DfG~~~~~ 155 (332)
T cd05614 113 EIILALEHLHKLGIVYRDIKLENILLDSE--GHVVLTDFGLSKEF 155 (332)
T ss_pred HHHHHHHHHHHCCcEecCCCHHHeEECCC--CCEEEeeCcCCccc
Confidence 443 788999999999999999999865 89999999998754
No 80
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.41 E-value=8.4e-13 Score=146.09 Aligned_cols=139 Identities=14% Similarity=0.122 Sum_probs=92.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +++.||||+.+...... ..+. ..+..|.
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~---------------------------------~~~~~e~ 51 (323)
T cd05616 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQ-DDDV---------------------------------ECTMVEK 51 (323)
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHH---------------------------------HHHHHHH
Confidence 57999999999999976 78999999976432110 0000 0012233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+....+ + -.|+.++ . ....+|||||++|.+|.+.... ...++...+...+.+++
T Consensus 52 ~~l~~~~~-----------------~--~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~-~~~~~~~~~~~~~~qi~ 111 (323)
T cd05616 52 RVLALSGK-----------------P--PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQ-VGRFKEPHAVFYAAEIA 111 (323)
T ss_pred HHHHhccC-----------------C--CeEeeEEEEEecCCEEEEEEcCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 33222211 1 1233333 2 3457899999999999766432 23345555555555444
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+..+|..|++|||+||+|||++.+ +.++|+|||++...
T Consensus 112 ~aL~~LH~~~ivHrDlkp~Nill~~~--~~~kL~DfG~~~~~ 151 (323)
T cd05616 112 IGLFFLHSKGIIYRDLKLDNVMLDSE--GHIKIADFGMCKEN 151 (323)
T ss_pred HHHHHHHHCCEEecCCCHHHeEECCC--CcEEEccCCCceec
Confidence 788999999999999999999865 89999999998753
No 81
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.41 E-value=4.1e-13 Score=150.05 Aligned_cols=140 Identities=19% Similarity=0.196 Sum_probs=94.9
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|+||+|+.. +|+.||||+.+...... . +. .-.+..|.
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~--~--------------------------~~------~~~~~~e~ 52 (350)
T cd05573 7 KVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIK--R--------------------------NQ------IAHVRAER 52 (350)
T ss_pred EEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhh--c--------------------------cH------HHHHHHHH
Confidence 57999999999999976 79999999876321100 0 00 00123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+..+.+ ..|++++ . ....++||||++|.+|.++.... ..+....+...+.+++
T Consensus 53 ~~l~~~~~--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~ 111 (350)
T cd05573 53 DILADADS--------------------PWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRK-DVFPEETARFYIAELV 111 (350)
T ss_pred HHHHhcCC--------------------CCccchhhheecCCeEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHH
Confidence 43333321 1122222 2 45678999999999998875422 3455554444444443
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|+||.|||++.+ +.++|+|||++..+..
T Consensus 112 ~aL~~LH~~giiH~Dlkp~NIll~~~--~~~kL~Dfg~~~~~~~ 153 (350)
T cd05573 112 LALDSVHKLGFIHRDIKPDNILIDAD--GHIKLADFGLCKKMNK 153 (350)
T ss_pred HHHHHHHHCCeeccCCCHHHeEECCC--CCEEeecCCCCccCcc
Confidence 889999999999999999999865 8999999999887654
No 82
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.41 E-value=5.6e-13 Score=147.12 Aligned_cols=138 Identities=17% Similarity=0.171 Sum_probs=91.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|.||+|+.+ +|+.||||+.++..... ..+.. .+..|.
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-~~~~~---------------------------------~~~~e~ 46 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLI-DDDVE---------------------------------CTMVEK 46 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-cchHH---------------------------------HHHHHH
Confidence 35899999999999987 79999999876532110 00000 012233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+.... ++ ..+++++. ....+|||||++|.+|.+.... ....+...+...+.+++
T Consensus 47 ~~l~~~~-----------------~~--~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~-~~~~~~~~~~~~~~qi~ 106 (316)
T cd05620 47 RVLALAW-----------------EN--PFLTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQD-KGRFDLYRATFYAAEIV 106 (316)
T ss_pred HHHHhcc-----------------CC--CCccCeeEEEEeCCEEEEEECCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 3322211 11 12333332 4567899999999998766432 23345555444444443
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
+..+|..|++|||+||+||+++.+ +.++|+|||++..
T Consensus 107 ~~l~~lH~~~ivHrDlkp~Nil~~~~--~~~kl~Dfg~~~~ 145 (316)
T cd05620 107 CGLQFLHSKGIIYRDLKLDNVMLDRD--GHIKIADFGMCKE 145 (316)
T ss_pred HHHHHHHHCCeEecCCCHHHeEECCC--CCEEeCccCCCee
Confidence 788999999999999999999865 8999999998764
No 83
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.41 E-value=8.8e-13 Score=146.75 Aligned_cols=50 Identities=16% Similarity=0.223 Sum_probs=39.6
Q ss_pred HHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 155 QKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 155 ~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..+...+.++. +..+|..|++|||+||.||+++.+ +.++|+|||+++.+.
T Consensus 174 ~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~--~~~kl~DfG~a~~~~ 225 (338)
T cd05102 174 EDLICYSFQVARGMEFLASRKCIHRDLAARNILLSEN--NVVKICDFGLARDIY 225 (338)
T ss_pred HHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCC--CcEEEeecccccccc
Confidence 33344334433 788999999999999999999865 899999999988654
No 84
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=99.41 E-value=2.5e-13 Score=144.50 Aligned_cols=139 Identities=20% Similarity=0.183 Sum_probs=88.0
Q ss_pred ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 10 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
.+-+|+||||.||+|.+. ++++||||-..++-+-. .+ |
T Consensus 29 ~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k-nr----------------------------------------E 67 (364)
T KOG0658|consen 29 VRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK-NR----------------------------------------E 67 (364)
T ss_pred eEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC-cH----------------------------------------H
Confidence 467999999999999986 68999999655443210 11 2
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE-e---cCCc---eEEEeecCCcCCCChHHH---hhcCCCH---H
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI-Q---SSET---VLILEFMDGIRLNDCESL---EAFGVNK---Q 155 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~-~---~~~~---vLvmE~i~G~~L~~~~~~---~~~~~~~---~ 155 (864)
..-+.++ +++++.--..+ . .++. -|||||++ .+|.+..+. .....+. +
T Consensus 68 l~im~~l------------------~HpNIV~L~~~f~~~~~~d~~~lnlVleymP-~tL~~~~r~~~~~~~~mp~~~iK 128 (364)
T KOG0658|consen 68 LQIMRKL------------------DHPNIVRLLYFFSSSTESDEVYLNLVLEYMP-ETLYRVIRHYTRANQRMPLLEIK 128 (364)
T ss_pred HHHHHhc------------------CCcCeeeEEEEEEecCCCchhHHHHHHHhch-HHHHHHHHHHhhcCCCCceeeeH
Confidence 2222221 23333222221 1 2212 38999997 455554331 0112222 2
Q ss_pred HHHHHHHHHHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHH
Q 002927 156 KVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMK 210 (864)
Q Consensus 156 ~l~~~~~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r 210 (864)
-...++.+. +..||..||.|||+||.||||+.+ .|.++|+|||.++.+.+.+.
T Consensus 129 LYt~Qlfrg-l~yLh~~~IcHRDIKPqNlLvD~~-tg~LKicDFGSAK~L~~~ep 181 (364)
T KOG0658|consen 129 LYTYQLFRG-LAYLHSHGICHRDIKPQNLLVDPD-TGVLKICDFGSAKVLVKGEP 181 (364)
T ss_pred HHHHHHHHH-HHHHHhcCcccCCCChheEEEcCC-CCeEEeccCCcceeeccCCC
Confidence 223333333 778899999999999999999976 69999999999999876553
No 85
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.41 E-value=9.9e-13 Score=145.89 Aligned_cols=138 Identities=17% Similarity=0.167 Sum_probs=92.1
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.+ +++.||||+.+...... ..+. + .+..|.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~---------------------------~------~~~~e~ 46 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHD-DEDI---------------------------D------WVQTEK 46 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHH---------------------------H------HHHHHH
Confidence 35899999999999976 78999999976432110 0000 0 023344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..+.++.+ ++ .|+.++. ....+|||||++|.+|.+.... ...+....+...+.+++
T Consensus 47 ~~~~~~~~-----------------~~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~l~~~~~~~~~~qi~ 106 (327)
T cd05617 47 HVFEQASS-----------------NP--FLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQR-QRKLPEEHARFYAAEIC 106 (327)
T ss_pred HHHHhhcC-----------------CC--CEeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 43333321 11 2333332 4567899999999998765432 23355554444444433
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
+..+|..|++|||+||+|||++.+ +.++|+|||++..
T Consensus 107 ~al~~lH~~~ivHrDlkp~Nili~~~--~~~kl~Dfg~~~~ 145 (327)
T cd05617 107 IALNFLHERGIIYRDLKLDNVLLDAD--GHIKLTDYGMCKE 145 (327)
T ss_pred HHHHHHHHCCeeccCCCHHHEEEeCC--CCEEEecccccee
Confidence 788999999999999999999865 8999999998864
No 86
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.40 E-value=1.2e-12 Score=145.09 Aligned_cols=76 Identities=18% Similarity=0.218 Sum_probs=58.3
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
....+|||||++|.+|.+... .........+...+.+++ +..+|..|++|||+||+|||++.+ +.++|+|||++.
T Consensus 68 ~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~--~~~kL~DfG~~~ 144 (325)
T cd05604 68 TEKLYFVLDFVNGGELFFHLQ-RERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQ--GHVVLTDFGLCK 144 (325)
T ss_pred CCEEEEEEcCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCC--CCEEEeecCCcc
Confidence 466889999999999876543 223344444444444433 788999999999999999999865 899999999986
Q ss_pred c
Q 002927 204 K 204 (864)
Q Consensus 204 ~ 204 (864)
.
T Consensus 145 ~ 145 (325)
T cd05604 145 E 145 (325)
T ss_pred c
Confidence 4
No 87
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.40 E-value=7.8e-13 Score=146.84 Aligned_cols=140 Identities=19% Similarity=0.148 Sum_probs=92.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|.||+|+.+ +|+.||||+.+....... .+. . .+..|.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~-~~~---------------------------~------~~~~e~ 46 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDD-EDI---------------------------D------WVQTEK 46 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhh-hHH---------------------------H------HHHHHH
Confidence 35899999999999976 799999999764321100 000 0 022233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
..+.++.+ ++. +.+-..+. ....+|||||++|.+|.+... ....+....+...+.+++
T Consensus 47 ~il~~~~~-----------------hp~Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~-~~~~l~~~~~~~~~~qi~~~ 108 (329)
T cd05588 47 HVFETASN-----------------HPFLVGLHSCFQTESRLFFVIEFVSGGDLMFHMQ-RQRKLPEEHARFYSAEISLA 108 (329)
T ss_pred HHHHhccC-----------------CCCCCceEEEEEcCCEEEEEEeCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHH
Confidence 33333211 111 12222222 456789999999999876543 223455555555444444
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
+..+|..|++|||+||.||+++.+ +.++|+|||+++.
T Consensus 109 l~~lH~~~ivH~dlkp~Nili~~~--~~~kL~Dfg~~~~ 145 (329)
T cd05588 109 LNFLHERGIIYRDLKLDNVLLDAE--GHIKLTDYGMCKE 145 (329)
T ss_pred HHHHHHCCeEecCCCHHHeEECCC--CCEEECcCccccc
Confidence 788999999999999999999865 8999999998864
No 88
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.40 E-value=8.3e-13 Score=146.65 Aligned_cols=140 Identities=18% Similarity=0.149 Sum_probs=90.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+....... .+. . .+..|.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~-~~~---------------------------~------~~~~E~ 46 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDD-EDI---------------------------D------WVQTEK 46 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcch-hHH---------------------------H------HHHHHH
Confidence 46899999999999976 789999998764321100 000 0 022233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
..+.++.+ ++. +.+-..+. .+..+|||||++|.+|.+... ....+....+...+.+++
T Consensus 47 ~~l~~~~~-----------------hp~iv~~~~~~~~~~~~~lv~E~~~~~~L~~~~~-~~~~l~~~~~~~i~~qi~~~ 108 (329)
T cd05618 47 HVFEQASN-----------------HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ-RQRKLPEEHARFYSAEISLA 108 (329)
T ss_pred HHHHhcCC-----------------CCcCCceeeEEEeCCEEEEEEeCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHH
Confidence 33222211 111 11112222 566789999999999876543 223455544444444433
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
+..+|..|++|||+||.||+++.+ +.++|+|||++..
T Consensus 109 l~~lH~~~ivH~Dikp~Nili~~~--~~~kL~DfG~~~~ 145 (329)
T cd05618 109 LNYLHERGIIYRDLKLDNVLLDSE--GHIKLTDYGMCKE 145 (329)
T ss_pred HHHHHHCCeeeCCCCHHHEEECCC--CCEEEeeCCcccc
Confidence 788999999999999999999865 8999999999865
No 89
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.40 E-value=1.2e-12 Score=141.60 Aligned_cols=142 Identities=16% Similarity=0.151 Sum_probs=93.1
Q ss_pred cccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHHH
Q 002927 13 LATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAEN 91 (864)
Q Consensus 13 lasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~n 91 (864)
||+|++|.||+++.+ +|+.||||+......... .. .-.+..|.+.
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~-~~---------------------------------~~~~~~E~~i 46 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKR-KG---------------------------------YEGAMVEKRI 46 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhh-HH---------------------------------HHHHHHHHHH
Confidence 689999999999976 899999997653211000 00 0013345555
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHH---hhcCCCHHHHHHHHHHHH--
Q 002927 92 TRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESL---EAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~---~~~~~~~~~l~~~~~~~~-- 165 (864)
+.++.+. .-+.+...+. ....+|||||++|.+|.+.... .....+...+...+.+++
T Consensus 47 l~~l~~~-----------------~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~ 109 (280)
T cd05608 47 LAKVHSR-----------------FIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISG 109 (280)
T ss_pred HHhCCCC-----------------cEeeeeEEEcCCCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHH
Confidence 5554221 0122222222 4567899999999999765421 112345555555444444
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|+.|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 110 l~~lH~~~i~H~dlkp~Nili~~~--~~~~l~dfg~~~~~~~ 149 (280)
T cd05608 110 LEHLHQRRIIYRDLKPENVLLDND--GNVRISDLGLAVELKD 149 (280)
T ss_pred HHHHHHCCcccCCCCHHHEEECCC--CCEEEeeCccceecCC
Confidence 788999999999999999999865 8999999999876643
No 90
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.40 E-value=1.3e-12 Score=144.70 Aligned_cols=77 Identities=17% Similarity=0.169 Sum_probs=57.7
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
....++||||++|.+|.+.... ........+...+.+++ +..+|..|++|||+||+|||++.+ +.++|+|||++.
T Consensus 68 ~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~--~~~kl~DfG~a~ 144 (325)
T cd05602 68 ADKLYFVLDYINGGELFYHLQR-ERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQ--GHIVLTDFGLCK 144 (325)
T ss_pred CCeEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCC--CCEEEccCCCCc
Confidence 4567899999999999876542 22333343333333333 788999999999999999999865 899999999986
Q ss_pred cc
Q 002927 204 KL 205 (864)
Q Consensus 204 ~l 205 (864)
..
T Consensus 145 ~~ 146 (325)
T cd05602 145 EN 146 (325)
T ss_pred cc
Confidence 53
No 91
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=99.40 E-value=4.6e-13 Score=142.26 Aligned_cols=159 Identities=18% Similarity=0.223 Sum_probs=94.3
Q ss_pred ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 10 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
.+|||.|++|.|..|+.+ +|+.||||-. .+.+..-+ ..++..+ |
T Consensus 27 ~~~iG~GAyGvVcsA~~~~t~~~VAIKKi----~~~F~~~~-------------------------~akRtlR------E 71 (359)
T KOG0660|consen 27 IEPIGRGAYGVVCSAKDKRTGEKVAIKKI----LNPFENQI-------------------------DAKRTLR------E 71 (359)
T ss_pred cccccCcceeeEEEEEEcCCCCEeehhhh----hhhhhchH-------------------------HHHHHHH------H
Confidence 489999999999999986 8999999932 11111111 1112222 4
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
.+-+++|+|.-- ....++..|.... -..-++|+|+++ -+|.++.+... .+....+--.+-+++
T Consensus 72 lklLr~~~HeNI------------i~l~di~~p~~~~~f~DvYiV~elMe-tDL~~iik~~~-~L~d~H~q~f~YQiLrg 137 (359)
T KOG0660|consen 72 LKLLRHLRHENI------------IGLLDIFRPPSRDKFNDVYLVFELME-TDLHQIIKSQQ-DLTDDHAQYFLYQILRG 137 (359)
T ss_pred HHHHHHhcCCCc------------ceEEeecccccccccceeEEehhHHh-hHHHHHHHcCc-cccHHHHHHHHHHHHHh
Confidence 444444443100 0011233332222 456789999995 34444332111 022222211222222
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC-----hHHHHHHHHHHHH
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS-----SSMKQALAKMFFA 219 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~-----~~~r~~~~~l~~a 219 (864)
++.+|+.|++|||+||+|++++.+ +.++++|||+++.++ +.+.+.++.-||.
T Consensus 138 LKyiHSAnViHRDLKPsNll~n~~--c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYR 194 (359)
T KOG0660|consen 138 LKYIHSANVIHRDLKPSNLLLNAD--CDLKICDFGLARYLDKFFEDGFMTEYVATRWYR 194 (359)
T ss_pred cchhhcccccccccchhheeeccC--CCEEeccccceeeccccCcccchhcceeeeeec
Confidence 667789999999999999999976 899999999999994 4446666666654
No 92
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.39 E-value=8.7e-13 Score=144.45 Aligned_cols=139 Identities=21% Similarity=0.225 Sum_probs=92.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|.||+|+.+ +|+.||||+.+...... .+..+.+|+
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~------------------------------------~~~~~~~E~ 54 (303)
T cd07869 11 EKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEG------------------------------------TPFTAIREA 54 (303)
T ss_pred eeEEecCCEEEEEEEECCCCCEEEEEEeccccccc------------------------------------cchhHHHHH
Confidence 68999999999999986 79999999875321100 001133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
..+.++.+. ..+.+..++. ....++||||++| ++.+.............+...+.+++ +
T Consensus 55 ~~l~~l~h~-----------------niv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al 116 (303)
T cd07869 55 SLLKGLKHA-----------------NIVLLHDIIHTKETLTLVFEYVHT-DLCQYMDKHPGGLHPENVKLFLFQLLRGL 116 (303)
T ss_pred HHHhhCCCC-----------------CcCeEEEEEecCCeEEEEEECCCc-CHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence 554444221 1122333333 5567899999976 34333222223455555555544444 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
..+|..|++|+|+||+|||++.+ +.++|+|||++...
T Consensus 117 ~~lH~~~ivH~dlkp~Nill~~~--~~~kl~Dfg~~~~~ 153 (303)
T cd07869 117 SYIHQRYILHRDLKPQNLLISDT--GELKLADFGLARAK 153 (303)
T ss_pred HHHHHCCeecCCCCHHHEEECCC--CCEEECCCCcceec
Confidence 88999999999999999999865 89999999998654
No 93
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.39 E-value=1.2e-12 Score=144.90 Aligned_cols=141 Identities=20% Similarity=0.189 Sum_probs=91.8
Q ss_pred cccccccceeeEEEEec----CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHH
Q 002927 11 TPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 86 (864)
Q Consensus 11 ~plasaSigqV~~A~l~----~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 86 (864)
+.||+|++|.||+|+.. +|+.||||+.+..... .+.. ....+.
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~---~~~~------------------------------~~~~~~ 48 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIV---RNQK------------------------------DTAHTK 48 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHH---hhhh------------------------------hHHHHH
Confidence 56999999999999853 5889999987632110 0000 011134
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHH
Q 002927 87 SEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 164 (864)
Q Consensus 87 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~ 164 (864)
.|...++++.+ +. +.+-..+. ....++||||++|.+|.+.... ........+...+.++
T Consensus 49 ~E~~il~~l~h------------------p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi 109 (323)
T cd05584 49 AERNILEAVKH------------------PFIVDLIYAFQTGGKLYLILEYLSGGELFMHLER-EGIFMEDTACFYLSEI 109 (323)
T ss_pred HHHHHHHhCCC------------------CchhceeeEEecCCeEEEEEeCCCCchHHHHHHH-cCCCCHHHHHHHHHHH
Confidence 45555555432 11 11222222 4567899999999999776432 2223333433333333
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+ +..+|..|++|+|+||.|||++.+ +.++|+|||+++..
T Consensus 110 ~~~l~~lH~~~ivH~dlkp~Nil~~~~--~~~kl~Dfg~~~~~ 150 (323)
T cd05584 110 SLALEHLHQQGIIYRDLKPENILLDAQ--GHVKLTDFGLCKES 150 (323)
T ss_pred HHHHHHHHHCCeecCCCCHHHeEECCC--CCEEEeeCcCCeec
Confidence 3 788999999999999999999865 89999999998643
No 94
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.39 E-value=1.5e-12 Score=144.03 Aligned_cols=76 Identities=17% Similarity=0.197 Sum_probs=57.3
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
....+|||||++|.+|.+... .........+...+.+++ +..+|..|++|||+||.||+++.+ |.++|+|||++.
T Consensus 68 ~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~--~~~kl~Dfg~~~ 144 (321)
T cd05603 68 AEKLYFVLDYVNGGELFFHLQ-RERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQ--GHVVLTDFGLCK 144 (321)
T ss_pred CCEEEEEEcCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCC--CCEEEccCCCCc
Confidence 456789999999999876543 222344444444333333 788999999999999999999865 899999999886
Q ss_pred c
Q 002927 204 K 204 (864)
Q Consensus 204 ~ 204 (864)
.
T Consensus 145 ~ 145 (321)
T cd05603 145 E 145 (321)
T ss_pred c
Confidence 5
No 95
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.39 E-value=1.4e-12 Score=144.23 Aligned_cols=77 Identities=17% Similarity=0.179 Sum_probs=58.4
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
....+|||||++|.+|.+.... ........+...+.+++ +..+|..|++|||+||.|||++.+ +.++|+|||++.
T Consensus 68 ~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~--~~~kl~Dfg~~~ 144 (323)
T cd05575 68 ADKLYFVLDYVNGGELFFHLQR-ERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQ--GHVVLTDFGLCK 144 (323)
T ss_pred CCEEEEEEcCCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCC--CcEEEeccCCCc
Confidence 4567899999999999776432 22344444444333433 788999999999999999999865 899999999886
Q ss_pred cc
Q 002927 204 KL 205 (864)
Q Consensus 204 ~l 205 (864)
..
T Consensus 145 ~~ 146 (323)
T cd05575 145 EG 146 (323)
T ss_pred cc
Confidence 53
No 96
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.39 E-value=1.5e-12 Score=146.98 Aligned_cols=141 Identities=18% Similarity=0.174 Sum_probs=93.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +++.||+|+....-.. -..+. -.+..|.
T Consensus 49 ~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~-~~~~~---------------------------------~~~~~e~ 94 (371)
T cd05622 49 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMI-KRSDS---------------------------------AFFWEER 94 (371)
T ss_pred EEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhh-hhHHH---------------------------------HHHHHHH
Confidence 67999999999999987 7899999986521000 00000 0122343
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
..+..+++ +. +.+-..+. ....++||||++|++|.++.. ........+...+.+++
T Consensus 95 ~i~~~~~h------------------p~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~~~--~~~~~~~~~~~~~~qi~~a 154 (371)
T cd05622 95 DIMAFANS------------------PWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMS--NYDVPEKWARFYTAEVVLA 154 (371)
T ss_pred HHHHhCCC------------------CCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHH--hcCCCHHHHHHHHHHHHHH
Confidence 33333221 11 12222222 455789999999999988753 33445444443333333
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|||+||.|||++.+ +.++|+|||++..+..
T Consensus 155 L~~LH~~~ivHrDLkp~NIll~~~--~~ikL~DfG~a~~~~~ 194 (371)
T cd05622 155 LDAIHSMGFIHRDVKPDNMLLDKS--GHLKLADFGTCMKMNK 194 (371)
T ss_pred HHHHHHCCEEeCCCCHHHEEECCC--CCEEEEeCCceeEcCc
Confidence 788999999999999999999865 8999999999887653
No 97
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.39 E-value=2.7e-12 Score=127.89 Aligned_cols=128 Identities=23% Similarity=0.371 Sum_probs=93.3
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+|++.|..++||+++. .|+.|+||+.+++.. ...++..|++
T Consensus 4 ~~l~~G~~~~vy~~~~-~~~~~~lK~~~~~~~--------------------------------------~~~~~~~E~~ 44 (170)
T cd05151 4 SPLKGGMTNKNYRVEV-ANKKYVVRIPGNGTE--------------------------------------LLINRENEAE 44 (170)
T ss_pred eecCCcccCceEEEEE-CCeEEEEEeCCCCcc--------------------------------------cccCHHHHHH
Confidence 7899999999999996 588999998665431 1234567888
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHHHHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQ 168 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~l~~ 168 (864)
.++.+.+. ..+|+++. .+..++||||++|.++.+... .+ ......+++. +..
T Consensus 45 ~l~~l~~~-------------------~~~P~~~~~~~~~~~lv~e~i~G~~l~~~~~-----~~-~~~~~~l~~~-l~~ 98 (170)
T cd05151 45 NSKLAAEA-------------------GIGPKLYYFDPETGVLITEFIEGSELLTEDF-----SD-PENLEKIAKL-LKK 98 (170)
T ss_pred HHHHHHHh-------------------CCCCceEEEeCCCCeEEEEecCCCccccccc-----cC-HHHHHHHHHH-HHH
Confidence 88887652 13677776 455899999999999876411 11 2233444433 567
Q ss_pred HHhcC-----eeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 169 IYVDG-----FFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 169 i~~~G-----~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+|..+ ++|+|+||+||+++ + +++++||||.+..-+
T Consensus 99 LH~~~~~~~~~~HgD~~~~Nil~~-~--~~~~liDf~~a~~~~ 138 (170)
T cd05151 99 LHSSPLPDLVPCHNDLLPGNFLLD-D--GRLWLIDWEYAGMND 138 (170)
T ss_pred HhCCCCCCceeecCCCCcCcEEEE-C--CeEEEEecccccCCC
Confidence 78777 59999999999998 3 689999999988643
No 98
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.39 E-value=1.7e-12 Score=144.86 Aligned_cols=142 Identities=19% Similarity=0.276 Sum_probs=104.1
Q ss_pred ccccccccccccccceeeEEEEec-CCCEEEEEEec---CChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHh
Q 002927 4 MFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQH---QGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEA 79 (864)
Q Consensus 4 ~F~~fd~~plasaSigqV~~A~l~-~G~~VAVKv~~---p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~ 79 (864)
.|..| +-||.|+-|-||.|+.. +++.||||... -.-++.+-
T Consensus 274 ~y~~~--~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLil--------------------------------- 318 (550)
T KOG0578|consen 274 KYTDF--KKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLL--------------------------------- 318 (550)
T ss_pred hhcch--hhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhH---------------------------------
Confidence 44555 44999999999999964 89999999632 11122222
Q ss_pred HhhccHHHHH--HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHH
Q 002927 80 PKELDFNSEA--ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKV 157 (864)
Q Consensus 80 ~~Eld~~~Ea--~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l 157 (864)
.|+..+++. .|+.+|-+.|-. ..+.+.||||++|++|.|+.. ....+..++
T Consensus 319 -nEi~Vm~~~~H~NiVnfl~Sylv------------------------~deLWVVMEym~ggsLTDvVt--~~~~~E~qI 371 (550)
T KOG0578|consen 319 -NEILVMRDLHHPNIVNFLDSYLV------------------------GDELWVVMEYMEGGSLTDVVT--KTRMTEGQI 371 (550)
T ss_pred -HHHHHHHhccchHHHHHHHHhcc------------------------cceeEEEEeecCCCchhhhhh--cccccHHHH
Confidence 222222222 366666554320 355678999999999999854 444677777
Q ss_pred HHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHH
Q 002927 158 VEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 209 (864)
Q Consensus 158 ~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 209 (864)
+..+-+.+ |+.+|..||+|||+|-.|||+..+ |.++|.|||++.+++++.
T Consensus 372 A~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~--g~vKltDFGFcaqi~~~~ 423 (550)
T KOG0578|consen 372 AAICREILQGLKFLHARGIIHRDIKSDNILLTMD--GSVKLTDFGFCAQISEEQ 423 (550)
T ss_pred HHHHHHHHHHHHHHHhcceeeeccccceeEeccC--CcEEEeeeeeeecccccc
Confidence 77766655 889999999999999999999976 899999999999999876
No 99
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.39 E-value=6.7e-13 Score=148.55 Aligned_cols=144 Identities=15% Similarity=0.201 Sum_probs=101.0
Q ss_pred ccccc-ccccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhc
Q 002927 5 FMDFV-ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 83 (864)
Q Consensus 5 F~~fd-~~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~El 83 (864)
++++. -++||+||||.||||+++ | +||||++.-..... +-.+
T Consensus 391 ~~ev~l~~rIGsGsFGtV~Rg~wh-G-dVAVK~Lnv~~pt~-----------------------------~qlq------ 433 (678)
T KOG0193|consen 391 PEEVLLGERIGSGSFGTVYRGRWH-G-DVAVKLLNVDDPTP-----------------------------EQLQ------ 433 (678)
T ss_pred HHHhhccceeccccccceeecccc-c-ceEEEEEecCCCCH-----------------------------HHHH------
Confidence 34443 378999999999999986 3 69999875322111 0000
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHH
Q 002927 84 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEI 161 (864)
Q Consensus 84 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~ 161 (864)
.|.+|..++++-||.. |.+ =.-+ .-...+|..||+|-+|.......+..++..++....
T Consensus 434 aFKnEVa~lkkTRH~N------------------IlL-FMG~~~~p~~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIA 494 (678)
T KOG0193|consen 434 AFKNEVAVLKKTRHEN------------------ILL-FMGACMNPPLAIITQWCEGSSLYTHLHVQETKFDMNTTIDIA 494 (678)
T ss_pred HHHHHHHHHhhcchhh------------------hee-eehhhcCCceeeeehhccCchhhhhccchhhhhhHHHHHHHH
Confidence 1777888888877631 110 0112 233579999999999998877666666655544444
Q ss_pred HHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 162 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 162 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
-++. +.++|..+|||+|||.-||++.++ ++++|.|||++..-+
T Consensus 495 qQiaqGM~YLHAK~IIHrDLKSnNIFl~~~--~kVkIgDFGLatvk~ 539 (678)
T KOG0193|consen 495 QQIAQGMDYLHAKNIIHRDLKSNNIFLHED--LKVKIGDFGLATVKT 539 (678)
T ss_pred HHHHHhhhhhhhhhhhhhhccccceEEccC--CcEEEecccceeeee
Confidence 4433 778999999999999999999865 899999999987543
No 100
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.38 E-value=1.6e-12 Score=146.74 Aligned_cols=142 Identities=17% Similarity=0.170 Sum_probs=93.3
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|.||+|+.+ +|+.||||+....-... .. ..-.+..|.
T Consensus 49 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~---------------------------------~~~~~~~e~ 94 (370)
T cd05596 49 KVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIK-RS---------------------------------DSAFFWEER 94 (370)
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hh---------------------------------hHHHHHHHH
Confidence 67999999999999976 79999999875210000 00 000123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
..+..+.+. .-+.+...+. ....+|||||++|++|.++.. ........+...+.+++ +
T Consensus 95 ~il~~~~h~-----------------~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~--~~~l~~~~~~~~~~qi~~aL 155 (370)
T cd05596 95 DIMAHANSE-----------------WIVQLHYAFQDDKYLYMVMEYMPGGDLVNLMS--NYDIPEKWARFYTAEVVLAL 155 (370)
T ss_pred HHHHhCCCC-----------------CcceEEEEEecCCEEEEEEcCCCCCcHHHHHH--hcCCCHHHHHHHHHHHHHHH
Confidence 444333211 0122222222 455789999999999987743 33344444444333333 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+|..|++|||+||.|||++.+ +.++|+|||++..+..
T Consensus 156 ~~LH~~~ivHrDLkp~NILl~~~--~~~kL~DfG~~~~~~~ 194 (370)
T cd05596 156 DAIHSMGFIHRDVKPDNMLLDKS--GHLKLADFGTCMKMDA 194 (370)
T ss_pred HHHHHCCeeccCCCHHHEEEcCC--CCEEEEeccceeeccC
Confidence 88999999999999999999865 8999999999876643
No 101
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.38 E-value=2.3e-12 Score=139.34 Aligned_cols=79 Identities=25% Similarity=0.280 Sum_probs=60.2
Q ss_pred CceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 128 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 128 ~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
...+.|||++|++|.+........+....+.....+.+ +.+||++||+|||+||.|||++.. ++.++|.|||+++.+
T Consensus 90 ~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~-~~~~KlaDFG~a~~~ 168 (313)
T KOG0198|consen 90 EYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPS-NGDVKLADFGLAKKL 168 (313)
T ss_pred eeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCC-CCeEEeccCcccccc
Confidence 46799999999999998653222244444433333333 888999999999999999999862 489999999999887
Q ss_pred Ch
Q 002927 206 SS 207 (864)
Q Consensus 206 ~~ 207 (864)
..
T Consensus 169 ~~ 170 (313)
T KOG0198|consen 169 ES 170 (313)
T ss_pred cc
Confidence 63
No 102
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.38 E-value=2.4e-12 Score=137.49 Aligned_cols=139 Identities=22% Similarity=0.257 Sum_probs=96.9
Q ss_pred cccccceeeEEEEec---CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 13 LATASIAQVHRATLV---DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 13 lasaSigqV~~A~l~---~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
||.|++|.||+|+++ ++..||||+..+........ +|.+|+
T Consensus 3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~------------------------------------~~~~E~ 46 (257)
T cd05115 3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRD------------------------------------EMMREA 46 (257)
T ss_pred cCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHH------------------------------------HHHHHH
Confidence 899999999999864 45679999876543221110 144466
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AH 167 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~ 167 (864)
..+.++.+. .-+.+..+......++||||++|.+|.+.........+...+.+.+.++. +.
T Consensus 47 ~~l~~l~h~-----------------~ii~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~ 109 (257)
T cd05115 47 EIMHQLDNP-----------------YIVRMIGVCEAEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMK 109 (257)
T ss_pred HHHHhcCCC-----------------CeEEEEEEEcCCCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHH
Confidence 555554321 11222222234567899999999999887653344556666666555554 77
Q ss_pred HHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 168 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 168 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 110 ~lH~~~i~H~dlkp~nil~~~~--~~~kl~dfg~~~~~~ 146 (257)
T cd05115 110 YLEGKNFVHRDLAARNVLLVNQ--HYAKISDFGLSKALG 146 (257)
T ss_pred HHHhcCeeecccchheEEEcCC--CcEEeccCCcccccc
Confidence 8899999999999999999865 889999999987654
No 103
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.38 E-value=1.3e-12 Score=144.62 Aligned_cols=142 Identities=15% Similarity=0.116 Sum_probs=92.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.++..... ..+.+ .+..|.
T Consensus 5 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~---------------------------------~l~~e~ 50 (324)
T cd05589 5 AVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIA-RDEVE---------------------------------SLMCEK 50 (324)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hhHHH---------------------------------HHHHHH
Confidence 56999999999999976 79999999976432100 00000 122233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
+-+..++. + .++. +.+...+. ....+|||||++|.+|.... ....++...+...+.+++
T Consensus 51 ~~~~~~~~-l--------------~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~~--~~~~l~~~~~~~~~~qi~~a 113 (324)
T cd05589 51 RIFETANS-E--------------RHPFLVNLFACFQTEDHVCFVMEYAAGGDLMMHI--HTDVFSEPRAVFYAACVVLG 113 (324)
T ss_pred HHHHhccc-c--------------CCCChhceeeEEEcCCEEEEEEcCCCCCcHHHHh--hcCCCCHHHHHHHHHHHHHH
Confidence 33322221 1 1111 11222222 45678999999999887653 233455555555554444
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+..+|+.|++|||+||.||+++.+ +.++|+|||++...
T Consensus 114 l~~lH~~~ivHrdlkp~Nill~~~--~~~kL~Dfg~~~~~ 151 (324)
T cd05589 114 LQYLHENKIVYRDLKLDNLLLDTE--GFVKIADFGLCKEG 151 (324)
T ss_pred HHHHHhCCeEecCCCHHHeEECCC--CcEEeCcccCCccC
Confidence 788999999999999999999865 89999999987653
No 104
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.38 E-value=1.1e-12 Score=142.55 Aligned_cols=137 Identities=16% Similarity=0.135 Sum_probs=90.6
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|.||+|+.+ +|+.||||+.+...... ....+.+|.
T Consensus 11 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~------------------------------------~~~~~~~E~ 54 (288)
T cd07871 11 DKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEG------------------------------------APCTAIREV 54 (288)
T ss_pred eEEecCCCEEEEEEEECCCCCEEEEEEecccccCC------------------------------------cchhHHHHH
Confidence 67999999999999976 79999999875321100 000123455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+.++.+ ++ |.+++ . ....++||||++| +|.+.............+...+.++.
T Consensus 55 ~~l~~l~h------------------~n--iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~ 113 (288)
T cd07871 55 SLLKNLKH------------------AN--IVTLHDIIHTERCLTLVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLL 113 (288)
T ss_pred HHHHhCCC------------------CC--EeeEEEEEcCCCeEEEEEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 55544422 22 23333 2 3457899999997 66655432222234444444333333
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|+.|++|+|+||+|||++.+ ++++|+|||++....
T Consensus 114 ~aL~~LH~~~ivH~dlkp~Nil~~~~--~~~kl~DfG~~~~~~ 154 (288)
T cd07871 114 RGLSYCHKRKILHRDLKPQNLLINEK--GELKLADFGLARAKS 154 (288)
T ss_pred HHHHHHHhCCcccCCCCHHHEEECCC--CCEEECcCcceeecc
Confidence 788999999999999999999865 899999999987543
No 105
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.38 E-value=1.9e-12 Score=143.62 Aligned_cols=77 Identities=21% Similarity=0.213 Sum_probs=59.8
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
....+|||||++|.+|.+... ....++...+...+.+++ +..+|..|++|||+||.|||++.+ +.++|+|||++.
T Consensus 68 ~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~--~~~kl~Dfg~a~ 144 (330)
T cd05586 68 DSDLYLVTDYMSGGELFWHLQ-KEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDAT--GHIALCDFGLSK 144 (330)
T ss_pred CCeEEEEEcCCCCChHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCC--CCEEEecCCcCc
Confidence 456789999999999876643 223455555555444444 788999999999999999999865 899999999986
Q ss_pred cc
Q 002927 204 KL 205 (864)
Q Consensus 204 ~l 205 (864)
..
T Consensus 145 ~~ 146 (330)
T cd05586 145 AN 146 (330)
T ss_pred CC
Confidence 53
No 106
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.37 E-value=2.9e-12 Score=139.71 Aligned_cols=154 Identities=17% Similarity=0.200 Sum_probs=97.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+-||+|++|.|-+|+.. +|+.|||||....-.. +..........+...++ +..+|.
T Consensus 103 ~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~---------~~~~~~~~~a~~~~~~e--------------kv~~EI 159 (576)
T KOG0585|consen 103 KEIGSGQYGKVKLARDEVDGKLYAIKILPKKELR---------RQYGFPRQPAMKLMPIE--------------KVRREI 159 (576)
T ss_pred hhhcCCccceEEEEeecCCCcEEEEEeechhhhh---------hhcccccccccccCcHH--------------HHHHHH
Confidence 56999999999999975 8999999997521110 00000000000111111 134566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH-
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~- 165 (864)
.-++++.|- .-|.+-+|.. +++.|||+|||..+.+...-. ....+.....-..+.+.+
T Consensus 160 ailKkl~H~-----------------nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~-d~~els~~~Ar~ylrDvv~ 221 (576)
T KOG0585|consen 160 AILKKLHHP-----------------NVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPP-DKPELSEQQARKYLRDVVL 221 (576)
T ss_pred HHHHhcCCc-----------------CeeEEEEeecCcccCceEEEEEeccCCccccCCC-CcccccHHHHHHHHHHHHH
Confidence 667776441 1244455553 678899999999988876421 111122222222232332
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
|+++|.+||+|||+||.|+|++.+ |+++|.|||.+...+.
T Consensus 222 GLEYLH~QgiiHRDIKPsNLLl~~~--g~VKIsDFGVs~~~~~ 262 (576)
T KOG0585|consen 222 GLEYLHYQGIIHRDIKPSNLLLSSD--GTVKISDFGVSNEFPQ 262 (576)
T ss_pred HHHHHHhcCeeccccchhheEEcCC--CcEEeeccceeeeccc
Confidence 889999999999999999999976 9999999998876643
No 107
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.37 E-value=2.4e-12 Score=143.01 Aligned_cols=140 Identities=14% Similarity=0.112 Sum_probs=91.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+++.+ +++.||||+..... ....+ . ...+..|.
T Consensus 7 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~--~~~~~--------------------------~------~~~~~~e~ 52 (332)
T cd05623 7 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWE--MLKRA--------------------------E------TACFREER 52 (332)
T ss_pred EEEEeCCCeEEEEEEECCCCCEEEEEEEeHHH--HHHhh--------------------------H------HHHHHHHH
Confidence 67999999999999986 68899999864210 00000 0 00122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..+..+. ++ .+..++. ....+|||||++|++|.++.......+....+...+.++.
T Consensus 53 ~~l~~~~------------------~~--~i~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~ 112 (332)
T cd05623 53 DVLVNGD------------------NQ--WITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMV 112 (332)
T ss_pred HHHhhCC------------------CC--CEeeEEEEEecCCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 3322221 11 2333332 4567899999999999888643223344444333333333
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|||+||.||+++.+ +.++|+|||++..+.
T Consensus 113 ~al~~lH~~~iiHrDlkp~Nili~~~--~~~kL~DfG~a~~~~ 153 (332)
T cd05623 113 IAIDSVHQLHYVHRDIKPDNILMDMN--GHIRLADFGSCLKLM 153 (332)
T ss_pred HHHHHHHHCCeEecCCCHHHEEECCC--CCEEEeecchheecc
Confidence 788999999999999999999865 899999999887653
No 108
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.36 E-value=2.1e-12 Score=139.04 Aligned_cols=139 Identities=18% Similarity=0.204 Sum_probs=92.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+-||.|.+|.||.++++ ++...|+||.-..... .. +++.+ ...|.
T Consensus 83 k~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~---~r----kKl~R---------------------------a~tE~ 128 (459)
T KOG0610|consen 83 KRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLA---SR----KKLKR---------------------------AQTER 128 (459)
T ss_pred HHcCCCCceeEEEEEecCCCceEEEEEecHHHHh---hh----hHHHH---------------------------HHHHH
Confidence 67999999999999997 5789999996432111 00 00000 11132
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--cC--CceEEEeecCCcCCCChHHHhhcCCCHHHHHH---HHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SS--ETVLILEFMDGIRLNDCESLEAFGVNKQKVVE---EIT 162 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~--~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~---~~~ 162 (864)
.-+..+ .+..+|.+|. .+ -.+||||||+|+.|..+.+.+....=.+..++ .=+
T Consensus 129 eIL~~l--------------------DHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEv 188 (459)
T KOG0610|consen 129 EILSLL--------------------DHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEV 188 (459)
T ss_pred HHHHhc--------------------CCCccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHH
Confidence 233332 2356788885 33 35799999999999877543322211111111 112
Q ss_pred HHHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 163 RAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 163 ~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
-+.|+++|-.|||.|||||+||||+++ |.|.|.||-++.+.
T Consensus 189 l~ALEYLHmlGivYRDLKPENILvred--GHIMLsDFDLS~~~ 229 (459)
T KOG0610|consen 189 LLALEYLHMLGIVYRDLKPENILVRED--GHIMLSDFDLSLRC 229 (459)
T ss_pred HHHHHHHHhhceeeccCCcceeEEecC--CcEEeeeccccccC
Confidence 233889999999999999999999976 99999999998765
No 109
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.36 E-value=2.5e-12 Score=143.51 Aligned_cols=143 Identities=19% Similarity=0.099 Sum_probs=92.9
Q ss_pred cccccccceeeEEEEec-C-CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 11 TPLATASIAQVHRATLV-D-GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~-G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
+.||+|++|.||+|+.+ + +..||||+....... .. +. .-.+.+|
T Consensus 36 ~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~--~~--------------------------~~------~~~~~~E 81 (340)
T PTZ00426 36 RTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKII--KQ--------------------------KQ------VDHVFSE 81 (340)
T ss_pred EEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhh--hh--------------------------hh------HHHHHHH
Confidence 78999999999999865 3 468999976421100 00 00 0013445
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
.+.+..+.+. .-+.+-..+. ....+|||||++|.+|.++... ...+....+...+.+++
T Consensus 82 ~~~l~~l~hp-----------------~Iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~-~~~~~~~~~~~~~~qi~~a 143 (340)
T PTZ00426 82 RKILNYINHP-----------------FCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRR-NKRFPNDVGCFYAAQIVLI 143 (340)
T ss_pred HHHHHhCCCC-----------------CCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHH
Confidence 5555554321 0111222222 4567899999999999877542 22344444333333333
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|||+||+|||++.+ +.++|+|||++..+..
T Consensus 144 L~~LH~~~ivHrDLkp~NILl~~~--~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 144 FEYLQSLNIVYRDLKPENLLLDKD--GFIKMTDFGFAKVVDT 183 (340)
T ss_pred HHHHHHCCeEccCCCHHHEEECCC--CCEEEecCCCCeecCC
Confidence 788999999999999999999865 8999999999987654
No 110
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.35 E-value=4e-12 Score=137.97 Aligned_cols=143 Identities=15% Similarity=0.129 Sum_probs=97.4
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|... +|+.||||+......... ..+..+.+|+
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~----------------------------------~~~~~~~~E~ 51 (285)
T cd05605 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKR----------------------------------KGEAMALNEK 51 (285)
T ss_pred EEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhh----------------------------------hhHHHHHHHH
Confidence 56999999999999975 799999998654221100 0122244566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~~-- 165 (864)
+.+.++++. ..+.+...+. ....++||||++|.+|.+...... ..++...+...+.+++
T Consensus 52 ~~l~~l~h~-----------------~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~ 114 (285)
T cd05605 52 QILEKVNSR-----------------FVVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCG 114 (285)
T ss_pred HHHHhcCCC-----------------CEeeeeeeecCCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHH
Confidence 665555321 1122222222 356789999999999987653222 2355555555555544
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|+|++|.||+++++ +.++|+|||++..+.
T Consensus 115 l~~lH~~~ivH~dlkp~Nil~~~~--~~~~l~Dfg~~~~~~ 153 (285)
T cd05605 115 LEDLHRERIVYRDLKPENILLDDY--GHIRISDLGLAVEIP 153 (285)
T ss_pred HHHHHHCCcEecCCCHHHEEECCC--CCEEEeeCCCceecC
Confidence 778999999999999999999865 889999999987664
No 111
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.35 E-value=4.3e-12 Score=141.00 Aligned_cols=141 Identities=19% Similarity=0.179 Sum_probs=95.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|+||+|+.+ +|..||+|+.+........ . .+.+|.
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~------------------------------~------~~~~E~ 54 (331)
T cd06649 11 SELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIR------------------------------N------QIIREL 54 (331)
T ss_pred EeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHH------------------------------H------HHHHHH
Confidence 57999999999999986 7999999998754322111 1 133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
+.+.++.+. .-+.+..++. ....+|||||++|.+|.++... ........+...+.++. +
T Consensus 55 ~~l~~l~h~-----------------~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l 116 (331)
T cd06649 55 QVLHECNSP-----------------YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKE-AKRIPEEILGKVSIAVLRGL 116 (331)
T ss_pred HHHHHCCCC-----------------CCCeEEEEEEECCEEEEEeecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHH
Confidence 555544321 0122222332 4567899999999999887542 22344444444443333 6
Q ss_pred HHHHh-cCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 167 HQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 167 ~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+|. .+++|+|+||.|||++.+ +.++|+|||++..+..
T Consensus 117 ~~lH~~~~ivH~dlkp~Nil~~~~--~~~kl~Dfg~~~~~~~ 156 (331)
T cd06649 117 AYLREKHQIMHRDVKPSNILVNSR--GEIKLCDFGVSGQLID 156 (331)
T ss_pred HHHhhcCCEEcCCCChhhEEEcCC--CcEEEccCcccccccc
Confidence 77886 479999999999999865 8999999999876643
No 112
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.35 E-value=4.9e-12 Score=137.29 Aligned_cols=143 Identities=15% Similarity=0.121 Sum_probs=98.3
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.. +|+.||||+..+...... ..+..+.+|+
T Consensus 6 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~----------------------------------~~~~~~~~E~ 51 (285)
T cd05632 6 RVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKR----------------------------------KGESMALNEK 51 (285)
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhh----------------------------------hHHHHHHHHH
Confidence 56999999999999975 799999998754321100 0011234466
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~~-- 165 (864)
+.+.++++. ..+.+...+. ....+++|||++|.+|.+...... ..++...+...+.+++
T Consensus 52 ~il~~l~~~-----------------~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~ 114 (285)
T cd05632 52 QILEKVNSQ-----------------FVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCG 114 (285)
T ss_pred HHHHHcCCc-----------------CceeEEEEEecCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 666555331 1122333333 456789999999999887653222 2455666666555554
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|+|+||+||+++.+ +.++|+|||++..++
T Consensus 115 l~~lH~~~iiH~dikp~Nili~~~--~~~kl~Dfg~~~~~~ 153 (285)
T cd05632 115 LEDLHRENTVYRDLKPENILLDDY--GHIRISDLGLAVKIP 153 (285)
T ss_pred HHHHHhCCeeecCCCHHHEEECCC--CCEEEecCCcceecC
Confidence 788999999999999999999865 789999999887654
No 113
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.35 E-value=5.2e-13 Score=147.98 Aligned_cols=178 Identities=17% Similarity=0.233 Sum_probs=118.2
Q ss_pred ccccccccccccccccceeeEEEEec-CCCEEEEEEec-CChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHh
Q 002927 2 GGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQH-QGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEA 79 (864)
Q Consensus 2 ~~~F~~fd~~plasaSigqV~~A~l~-~G~~VAVKv~~-p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~ 79 (864)
+.+|.++ +-||-||||-||.|+.. +.+.||||-.. -|-.. .+.|.
T Consensus 25 Eklf~dL--rEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs----------------------------~EKWq--- 71 (948)
T KOG0577|consen 25 EKLFSDL--REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQS----------------------------NEKWQ--- 71 (948)
T ss_pred HHHHHHH--HHhcCCccceeEEeeccCccceeeeeecccccccc----------------------------HHHHH---
Confidence 4456655 45999999999999975 78899999532 22111 11111
Q ss_pred HhhccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHH
Q 002927 80 PKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVV 158 (864)
Q Consensus 80 ~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~ 158 (864)
|...|.+.+.++++.. .|..--.|. ....+||||||-| +-+|+....+.++...+|+
T Consensus 72 ----DIlKEVrFL~~l~HPn-----------------tieYkgCyLre~TaWLVMEYClG-SAsDlleVhkKplqEvEIA 129 (948)
T KOG0577|consen 72 ----DILKEVRFLRQLRHPN-----------------TIEYKGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIA 129 (948)
T ss_pred ----HHHHHHHHHHhccCCC-----------------cccccceeeccchHHHHHHHHhc-cHHHHHHHHhccchHHHHH
Confidence 2233444444443310 111111122 4667899999986 5567777777788788888
Q ss_pred HHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHHHH------HHHHHHHHHhCCHHHHHH
Q 002927 159 EEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQA------LAKMFFAAAEGDHVALLS 230 (864)
Q Consensus 159 ~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~------~~~l~~a~~~~d~~~~~~ 230 (864)
..+...+ +.++|.++.||||+|.||||+.+. |.++|.|||.+...++...-. --++++|+-++-|++=++
T Consensus 130 Ai~~gaL~gLaYLHS~~~IHRDiKAGNILLse~--g~VKLaDFGSAsi~~PAnsFvGTPywMAPEVILAMDEGqYdgkvD 207 (948)
T KOG0577|consen 130 AITHGALQGLAYLHSHNRIHRDIKAGNILLSEP--GLVKLADFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVD 207 (948)
T ss_pred HHHHHHHHHHHHHHHhhHHhhhccccceEecCC--CeeeeccccchhhcCchhcccCCccccchhHheeccccccCCccc
Confidence 8777766 889999999999999999999964 999999999988877654321 124555665666665555
Q ss_pred HHHHcCC
Q 002927 231 AFAEMGL 237 (864)
Q Consensus 231 ~~~~~G~ 237 (864)
.+ .+|+
T Consensus 208 vW-SLGI 213 (948)
T KOG0577|consen 208 VW-SLGI 213 (948)
T ss_pred ee-eccc
Confidence 43 4554
No 114
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.35 E-value=3.5e-12 Score=142.91 Aligned_cols=145 Identities=19% Similarity=0.214 Sum_probs=105.6
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|.||+||+++.+ +|+.+|+|+........-. ..-+..+|.
T Consensus 41 ~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~----------------------------------~~~~v~~Ev 86 (382)
T KOG0032|consen 41 RELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKE----------------------------------DREDVRREV 86 (382)
T ss_pred hhhCCCCceEEEEEEecCCCceeEEEEeehhhccccc----------------------------------cHHHHHHHH
Confidence 67999999999999987 6999999986432211000 111345577
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
+.++++... ...+.++.+|. ....+||||+++|+.|.|...-. .+...+.+..+.+.. +
T Consensus 87 ~il~~l~~h----------------pniv~l~~~~e~~~~~~lvmEL~~GGeLfd~i~~~--~~sE~da~~~~~~il~av 148 (382)
T KOG0032|consen 87 AILQQLSGH----------------PNIVQLKDAFEDPDSVYLVMELCEGGELFDRIVKK--HYSERDAAGIIRQILEAV 148 (382)
T ss_pred HHHHhccCC----------------CCEEEEEEEEEcCCeEEEEEEecCCchHHHHHHHc--cCCHHHHHHHHHHHHHHH
Confidence 777776421 22477888887 56788999999999998875432 355555544444433 8
Q ss_pred HHHHhcCeeccCCCCCCeEEccCC--CCceEEEecccccccCh
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDP--PHRPILLDFGLTKKLSS 207 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~--~g~i~LiDFG~~~~l~~ 207 (864)
+++|..|++|||+||+|+|+.... +++++++|||++..+..
T Consensus 149 ~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~ 191 (382)
T KOG0032|consen 149 KYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP 191 (382)
T ss_pred HHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccC
Confidence 899999999999999999997542 35899999999998876
No 115
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.34 E-value=5.7e-12 Score=136.18 Aligned_cols=141 Identities=16% Similarity=0.148 Sum_probs=91.8
Q ss_pred cccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHHH
Q 002927 13 LATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAEN 91 (864)
Q Consensus 13 lasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~n 91 (864)
||+|++|+||+++.+ +|+.||+|+........ . ..+-.+..|...
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~---~-------------------------------~~~~~~~~E~~i 46 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKK---K-------------------------------SGEKMALLEKEI 46 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhc---c-------------------------------hhhHHHHHHHHH
Confidence 689999999999976 79999999764311100 0 000112224444
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCCCCCE-EEeeEEe-cCCceEEEeecCCcCCCChHHHh-hcCCCHHHHHHHHHHHH--H
Q 002927 92 TRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~v-~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~l~~~~~~~~--l 166 (864)
+.++.+ +.+ .+-..+. ....+|+|||++|.+|.+..... ..+.+...+...+.+++ +
T Consensus 47 l~~l~h------------------p~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al 108 (277)
T cd05607 47 LEKVNS------------------PFIVNLAYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGI 108 (277)
T ss_pred HHhcCC------------------CcEEEEEEEEecCCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHH
Confidence 444321 222 1222222 45678999999999997664321 22345555544444433 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 109 ~~lH~~~ivH~dikp~Nili~~~--~~~~l~Dfg~~~~~~~ 147 (277)
T cd05607 109 LHLHSMDIVYRDMKPENVLLDDQ--GNCRLSDLGLAVELKD 147 (277)
T ss_pred HHHHHCCEEEccCChHhEEEcCC--CCEEEeeceeeeecCC
Confidence 88999999999999999999865 8899999999876543
No 116
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.34 E-value=3.1e-12 Score=141.21 Aligned_cols=140 Identities=15% Similarity=0.150 Sum_probs=90.1
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.. +|+.||||+.++..... ..+.. .+..|.
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~---------------------------------~~~~e~ 46 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLM-DDDVE---------------------------------CTMVEK 46 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-cchHH---------------------------------HHHHHH
Confidence 35899999999999976 68999999987533110 00000 011233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
..+... + +++. +.+-..+. ....+|||||++|.+|.+.... ....+...+...+.+++
T Consensus 47 ~~l~~~---~--------------~hp~iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~a 108 (316)
T cd05619 47 RVLSLA---W--------------EHPFLTHLYCTFQTKENLFFVMEYLNGGDLMFHIQS-CHKFDLPRATFYAAEIICG 108 (316)
T ss_pred HHHHhc---c--------------CCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHH
Confidence 222221 1 1111 11222222 4557899999999999876532 22344444444444433
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
+..+|..|++|||+||.||+++.+ +.++|+|||++..
T Consensus 109 l~~LH~~~ivHrdikp~Nil~~~~--~~~kl~Dfg~~~~ 145 (316)
T cd05619 109 LQFLHSKGIVYRDLKLDNILLDTD--GHIKIADFGMCKE 145 (316)
T ss_pred HHHHHhCCeEeCCCCHHHEEECCC--CCEEEccCCcceE
Confidence 788999999999999999999865 8999999999865
No 117
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.34 E-value=2.8e-12 Score=140.85 Aligned_cols=139 Identities=15% Similarity=0.132 Sum_probs=90.7
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +++.||||+.+...... .+..+.+|.
T Consensus 12 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~------------------------------------~~~~~~~E~ 55 (309)
T cd07872 12 EKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEG------------------------------------APCTAIREV 55 (309)
T ss_pred EEecccCCEEEEEEEecCCCCeEEEEEeeccccCC------------------------------------cchhHHHHH
Confidence 67999999999999976 78999999865432110 001133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
+.+.++++. .-+.+-..+. ....++||||+++ ++.+.............+...+.+++ +
T Consensus 56 ~~l~~l~h~-----------------~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL 117 (309)
T cd07872 56 SLLKDLKHA-----------------NIVTLHDIVHTDKSLTLVFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGL 117 (309)
T ss_pred HHHHhCCCC-----------------CcceEEEEEeeCCeEEEEEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 555554321 1122233333 5668899999986 55444322222234444433333333 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
..+|..|++|||+||+||+++.+ +.++|+|||++...
T Consensus 118 ~~lH~~~ivH~dlkp~Nill~~~--~~~kl~Dfg~~~~~ 154 (309)
T cd07872 118 AYCHRRKVLHRDLKPQNLLINER--GELKLADFGLARAK 154 (309)
T ss_pred HHHHHCCeecCCCCHHHEEECCC--CCEEECccccceec
Confidence 88999999999999999999865 89999999998754
No 118
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.34 E-value=1.8e-12 Score=144.90 Aligned_cols=143 Identities=22% Similarity=0.241 Sum_probs=101.9
Q ss_pred ccccc-cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 6 MDFVE-TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 6 ~~fd~-~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
..|++ .-||.|+||.||+|.+.+|+.||||...+..... +.+
T Consensus 75 ~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~-------------------------------------~~e 117 (361)
T KOG1187|consen 75 NNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG-------------------------------------ERE 117 (361)
T ss_pred hCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc-------------------------------------hhH
Confidence 35654 6899999999999999999999999665443210 122
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEec---C-CceEEEeecCCcCCCChHHHhhc-CCC---HHH
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS---S-ETVLILEFMDGIRLNDCESLEAF-GVN---KQK 156 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~---~-~~vLvmE~i~G~~L~~~~~~~~~-~~~---~~~ 156 (864)
|.+|...+.+++|. + .|.-+-+| + .++||.||++.++|.+.+..... .++ +-+
T Consensus 118 F~~Ei~~ls~l~H~------------------N-lv~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~k 178 (361)
T KOG1187|consen 118 FLNEVEILSRLRHP------------------N-LVKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLK 178 (361)
T ss_pred HHHHHHHHhcCCCc------------------C-cccEEEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHH
Confidence 77788887777541 1 12222222 4 48999999999999987543322 233 234
Q ss_pred HHHHHHHHHHHHHHhcC---eeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 157 VVEEITRAYAHQIYVDG---FFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 157 l~~~~~~~~l~~i~~~G---~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
|+..+++. +..+|... |+|||+||.|||++++ .+.+|.|||+++..+.
T Consensus 179 Ia~g~A~g-L~yLH~~~~~~iiHrDiKssNILLD~~--~~aKlsDFGLa~~~~~ 229 (361)
T KOG1187|consen 179 IALGAARG-LAYLHEGCPPPIIHRDIKSSNILLDED--FNAKLSDFGLAKLGPE 229 (361)
T ss_pred HHHHHHHH-HHHHccCCCCCEecCCCCHHHeeECCC--CCEEccCccCcccCCc
Confidence 55555554 77888754 9999999999999965 9999999999966654
No 119
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=99.34 E-value=1.6e-12 Score=143.89 Aligned_cols=140 Identities=18% Similarity=0.188 Sum_probs=92.9
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+-||.||+|.||+|+.+ +++-||+|.....-+ -+.|++.+ .+|++..++.
T Consensus 8 e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr--~~k~l~~l---------------------------~~ev~i~r~l 58 (808)
T KOG0597|consen 8 EMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGR--NEKELKNL---------------------------RQEVRILRSL 58 (808)
T ss_pred HHhcCCccceeeecccccceeEEEEEEehhcCC--chHHHHHH---------------------------HHHHHHHHhc
Confidence 45999999999999987 899999998532111 12233322 2333333333
Q ss_pred H--HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 E--NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~--n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
+ |+..|.+.|+. +.+.++|.||+.| +|..++..+ ..+..+.+-+...+.+
T Consensus 59 kHpniv~m~esfEt------------------------~~~~~vVte~a~g-~L~~il~~d-~~lpEe~v~~~a~~LVsa 112 (808)
T KOG0597|consen 59 KHPNIVEMLESFET------------------------SAHLWVVTEYAVG-DLFTILEQD-GKLPEEQVRAIAYDLVSA 112 (808)
T ss_pred CCcchhhHHHhhcc------------------------cceEEEEehhhhh-hHHHHHHhc-cCCCHHHHHHHHHHHHHH
Confidence 2 33344333321 4556899999999 777765422 2233333333333333
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
++.+|..+|+|||+||.||++... |.++|+|||+++..+.
T Consensus 113 L~yLhs~rilhrd~kPqniLl~~~--~~~KlcdFg~Ar~m~~ 152 (808)
T KOG0597|consen 113 LYYLHSNRILHRDMKPQNILLEKG--GTLKLCDFGLARAMST 152 (808)
T ss_pred HHHHHhcCcccccCCcceeeecCC--Cceeechhhhhhhccc
Confidence 889999999999999999999854 8999999999987765
No 120
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.34 E-value=5e-12 Score=153.42 Aligned_cols=142 Identities=13% Similarity=0.095 Sum_probs=94.3
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.. +|+.||||+.+......- ... -+|.+|+
T Consensus 8 ~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e----------------------------~~~------~rflrEi 53 (932)
T PRK13184 8 RLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENP----------------------------LLK------KRFLREA 53 (932)
T ss_pred EEEecCCCEEEEEEEECCCCcEEEEEEECcccccCH----------------------------HHH------HHHHHHH
Confidence 67999999999999976 799999998765332110 000 1244566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhh----------cCCCHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA----------FGVNKQKVV 158 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~----------~~~~~~~l~ 158 (864)
+.+.++.+. .-+.+-.+.. ....+++|||++|.+|.++..... .+.+...+.
T Consensus 54 ~ILs~L~HP-----------------NIVkl~~v~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL 116 (932)
T PRK13184 54 KIAADLIHP-----------------GIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFL 116 (932)
T ss_pred HHHHhCCCc-----------------CcCeEEEEEeeCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHH
Confidence 555554321 0112222222 456789999999999988754210 111223333
Q ss_pred HHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 159 EEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 159 ~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
..+.++. +..+|..|++|||+||+||+++.+ |.++|+|||++..+
T Consensus 117 ~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~d--g~vKLiDFGLAk~i 163 (932)
T PRK13184 117 SIFHKICATIEYVHSKGVLHRDLKPDNILLGLF--GEVVILDWGAAIFK 163 (932)
T ss_pred HHHHHHHHHHHHHHHCCccccCCchheEEEcCC--CCEEEEecCcceec
Confidence 3333333 778999999999999999999865 89999999998866
No 121
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.34 E-value=1.1e-11 Score=146.51 Aligned_cols=140 Identities=21% Similarity=0.341 Sum_probs=96.9
Q ss_pred ccccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 10 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
.+.||+|++|.||+|++ .++.+++|+..+.....- ++. +. ...-.+.+|+
T Consensus 338 ~~~iG~G~~g~Vy~~~~-~~~~~v~k~~~~~~~~~~--~~~----------------------~~-----~~~~~~~~E~ 387 (535)
T PRK09605 338 DHLIGKGAEADIKKGEY-LGRDAVIKERVPKGYRHP--ELD----------------------ER-----LRTERTRAEA 387 (535)
T ss_pred cceeccCCcEEEEEEee-cCccceeEEEecccccch--hHH----------------------HH-----HHHHHHHHHH
Confidence 57899999999999987 455677776543221100 000 00 0111256788
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAH 167 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~l~ 167 (864)
+.+.++++ ..+.+|.++. ....+|||||++|.+|.+... ....++..+.+. +.
T Consensus 388 ~~l~~l~~------------------~~i~~p~~~~~~~~~~~lv~E~~~g~~L~~~l~------~~~~~~~~i~~~-L~ 442 (535)
T PRK09605 388 RLLSEARR------------------AGVPTPVIYDVDPEEKTIVMEYIGGKDLKDVLE------GNPELVRKVGEI-VA 442 (535)
T ss_pred HHHHhhcc------------------cCCCeeEEEEEeCCCCEEEEEecCCCcHHHHHH------HHHHHHHHHHHH-HH
Confidence 88877754 2355666665 457899999999999987643 123455555544 67
Q ss_pred HHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 168 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 168 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
++|..|++|||+||+|||+. + ++++|+|||+++..+.
T Consensus 443 ~lH~~giiHrDlkp~NILl~-~--~~~~liDFGla~~~~~ 479 (535)
T PRK09605 443 KLHKAGIVHGDLTTSNFIVR-D--DRLYLIDFGLGKYSDL 479 (535)
T ss_pred HHHhCCCccCCCChHHEEEE-C--CcEEEEeCcccccCCc
Confidence 89999999999999999993 3 7899999999987654
No 122
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.33 E-value=5.2e-12 Score=142.92 Aligned_cols=51 Identities=14% Similarity=0.237 Sum_probs=39.8
Q ss_pred HHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 155 QKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 155 ~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+...+.++. +..+|..|++|+|+||.|||++.+ +.++|+|||++..+..
T Consensus 214 ~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~--~~~kl~DfG~a~~~~~ 266 (375)
T cd05104 214 EDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHG--RITKICDFGLARDIRN 266 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECC--CcEEEecCccceeccC
Confidence 33344334433 788899999999999999999864 7899999999887654
No 123
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.33 E-value=8.7e-12 Score=133.91 Aligned_cols=152 Identities=20% Similarity=0.190 Sum_probs=98.2
Q ss_pred cccccccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhc
Q 002927 5 FMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 83 (864)
Q Consensus 5 F~~fd~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~El 83 (864)
|.++..++||+|++|+||+|... +|+.||||..+.........+.. ..+..+
T Consensus 1 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~---------------------~~~~~~------ 53 (272)
T cd06629 1 FKWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSR---------------------QKDMVK------ 53 (272)
T ss_pred CceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchH---------------------HHHHHH------
Confidence 66777899999999999999965 79999999765322211100000 000111
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHH
Q 002927 84 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVE 159 (864)
Q Consensus 84 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~ 159 (864)
.+..|+..+.++.+ + .+++++. ....++||||++|.+|.+..... ..++...+..
T Consensus 54 ~~~~e~~~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~ 112 (272)
T cd06629 54 ALRSEIETLKDLDH------------------L--NIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTY-GRFEEQLVRF 112 (272)
T ss_pred HHHHHHHHHHhcCC------------------C--CcceEEEEeccCCceEEEEecCCCCcHHHHHhhc-cCCCHHHHHH
Confidence 13345544444422 1 2233332 45678999999999998875422 2334333333
Q ss_pred HHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 160 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 160 ~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.+.+++ +..+|+.|++|+|++|+||+++.+ +.++|+|||++....
T Consensus 113 ~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~--~~~~l~d~~~~~~~~ 159 (272)
T cd06629 113 FTEQVLEGLAYLHSKGILHRDLKADNLLVDAD--GICKISDFGISKKSD 159 (272)
T ss_pred HHHHHHHHHHHHhhCCeeecCCChhhEEEcCC--CeEEEeecccccccc
Confidence 222222 678899999999999999999865 899999999987654
No 124
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.33 E-value=5e-12 Score=139.53 Aligned_cols=138 Identities=21% Similarity=0.235 Sum_probs=93.4
Q ss_pred cccccccceeeEEEEe----cCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHH
Q 002927 11 TPLATASIAQVHRATL----VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 86 (864)
Q Consensus 11 ~plasaSigqV~~A~l----~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 86 (864)
+.||+|++|.||+++. .+|+.||||+.+...... . ....+.
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~--~---------------------------------~~~~~~ 46 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKV--R---------------------------------DRVRTK 46 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhh--h---------------------------------hHHHHH
Confidence 4689999999999985 268999999876321100 0 001133
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH
Q 002927 87 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 162 (864)
Q Consensus 87 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~ 162 (864)
.|.+.+.++.+ + .|.+++ . ....+|||||++|.+|.+... ....++...+...+.
T Consensus 47 ~E~~~l~~l~h------------------~--niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~l~~~~~~~~~~ 105 (318)
T cd05582 47 MERDILAEVNH------------------P--FIVKLHYAFQTEGKLYLILDFLRGGDLFTRLS-KEVMFTEEDVKFYLA 105 (318)
T ss_pred HHHHHHHhCCC------------------C--CcccEEEEEEcCCEEEEEEcCCCCCcHHHHHH-HcCCCCHHHHHHHHH
Confidence 45555555432 1 122332 2 456789999999999877643 222345555554444
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++....
T Consensus 106 qi~~~l~~lH~~~i~H~dlkp~Nil~~~~--~~~kL~Dfg~~~~~~ 149 (318)
T cd05582 106 ELALALDHLHSLGIIYRDLKPENILLDEE--GHIKLTDFGLSKESI 149 (318)
T ss_pred HHHHHHHHHHHCCEecCCCCHHHeEECCC--CcEEEeeccCCcccC
Confidence 443 788999999999999999999865 899999999987654
No 125
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.33 E-value=8.3e-12 Score=135.12 Aligned_cols=78 Identities=19% Similarity=0.181 Sum_probs=60.1
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
....++||||++|.+|.+.... ...+....+...+.+++ +..+|..|++|+|+||+||+++++ +.++|+|||++.
T Consensus 69 ~~~~~lv~e~~~~~~L~~~i~~-~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~--~~~~l~dfg~~~ 145 (279)
T cd05633 69 PDKLCFILDLMNGGDLHYHLSQ-HGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEH--GHVRISDLGLAC 145 (279)
T ss_pred CCeEEEEEecCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCC--CCEEEccCCcce
Confidence 4567899999999999776432 23345555555444443 789999999999999999999865 899999999987
Q ss_pred ccC
Q 002927 204 KLS 206 (864)
Q Consensus 204 ~l~ 206 (864)
.+.
T Consensus 146 ~~~ 148 (279)
T cd05633 146 DFS 148 (279)
T ss_pred ecc
Confidence 554
No 126
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.33 E-value=5.2e-12 Score=134.24 Aligned_cols=140 Identities=20% Similarity=0.261 Sum_probs=99.4
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.. +|+.||+|+....-....... ...+|+
T Consensus 5 ~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~-----------------------------------~~~~e~ 49 (260)
T PF00069_consen 5 KKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEERE-----------------------------------ENIREI 49 (260)
T ss_dssp EEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHH-----------------------------------HHHHHH
T ss_pred EEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccc-----------------------------------hhhhhh
Confidence 57999999999999987 678999999775533221100 011256
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
+.++++++. .-+.+-.++. ....+++|||++|.+|.++.. ....++...+...+.+++ +
T Consensus 50 ~~~~~l~~~-----------------~i~~~~~~~~~~~~~~~v~~~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~L 111 (260)
T PF00069_consen 50 KILRRLRHP-----------------NIVQILDVFQDDNYLYIVMEYCPGGSLQDYLQ-KNKPLSEEEILKIAYQILEAL 111 (260)
T ss_dssp HHHHHHTBT-----------------TBCHEEEEEEESSEEEEEEEEETTEBHHHHHH-HHSSBBHHHHHHHHHHHHHHH
T ss_pred hcccccccc-----------------cccccccccccccccccccccccccccccccc-ccccccccccccccccccccc
Confidence 666665321 1122233333 566789999999999888765 344556666666555555 8
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
..+|+.|++|+|++|.||+++.+ ++++|+|||++..+
T Consensus 112 ~~Lh~~~i~H~dikp~NIl~~~~--~~~~l~Dfg~~~~~ 148 (260)
T PF00069_consen 112 AYLHSKGIVHRDIKPENILLDEN--GEVKLIDFGSSVKL 148 (260)
T ss_dssp HHHHHTTEEESSBSGGGEEESTT--SEEEESSGTTTEES
T ss_pred ccccccccccccccccccccccc--cccccccccccccc
Confidence 89999999999999999999955 89999999998753
No 127
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.33 E-value=2.7e-12 Score=144.87 Aligned_cols=134 Identities=16% Similarity=0.185 Sum_probs=96.9
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCCh------HHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhc
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGI------KTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 83 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i------~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~El 83 (864)
+-||.||-|.|..|+.. +|+.+||||.-... ...|++++-
T Consensus 18 kTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIv--------------------------------- 64 (786)
T KOG0588|consen 18 KTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIV--------------------------------- 64 (786)
T ss_pred ccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhH---------------------------------
Confidence 57999999999999975 89999999864321 112222222
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH
Q 002927 84 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 162 (864)
Q Consensus 84 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~ 162 (864)
-++-+.| ...+..-.|+. ..+.+||.||++|+.|.++.. .+.++...+.++.+.
T Consensus 65 -------iMkLi~H-----------------pnVl~LydVwe~~~~lylvlEyv~gGELFdylv-~kG~l~e~eaa~ff~ 119 (786)
T KOG0588|consen 65 -------IMKLIEH-----------------PNVLRLYDVWENKQHLYLVLEYVPGGELFDYLV-RKGPLPEREAAHFFR 119 (786)
T ss_pred -------HHHHhcC-----------------CCeeeeeeeeccCceEEEEEEecCCchhHHHHH-hhCCCCCHHHHHHHH
Confidence 2222222 11233444444 567899999999999999864 455666666666666
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
+++ +..+|..+|+|||+||+|+|++.. ++|+|.||||+..
T Consensus 120 QIi~gv~yCH~~~icHRDLKpENlLLd~~--~nIKIADFGMAsL 161 (786)
T KOG0588|consen 120 QILDGVSYCHAFNICHRDLKPENLLLDVK--NNIKIADFGMASL 161 (786)
T ss_pred HHHHHHHHHhhhcceeccCCchhhhhhcc--cCEeeeccceeec
Confidence 655 677899999999999999999976 6699999999864
No 128
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.32 E-value=7.4e-12 Score=138.00 Aligned_cols=139 Identities=18% Similarity=0.163 Sum_probs=95.3
Q ss_pred cccccccceeeEEEEec-CCC----EEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 11 TPLATASIAQVHRATLV-DGR----QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~----~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
+.||+|++|+||+|++. +|+ .||||+.++....... -++
T Consensus 13 ~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~------------------------------------~~~ 56 (316)
T cd05108 13 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN------------------------------------KEI 56 (316)
T ss_pred eeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHH------------------------------------HHH
Confidence 67999999999999964 454 4899987643221110 013
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 162 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~ 162 (864)
..|+..+..+.+ + .|.+++. ....+++|||+++++|.+.........+...+...+.
T Consensus 57 ~~e~~~l~~l~h------------------~--niv~~~g~~~~~~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~ 116 (316)
T cd05108 57 LDEAYVMASVDN------------------P--HVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 116 (316)
T ss_pred HHHHHHHHhCCC------------------C--CCCeEEEEEcCCCceeeeecCCCCCHHHHHHhccccCCHHHHHHHHH
Confidence 345544444322 1 1223332 4567899999999999887543333345555555554
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
++. +..+|+.|++|+|+||.||+++.+ +.++|+|||+++.+..
T Consensus 117 qi~~~L~~LH~~~iiH~dlkp~Nill~~~--~~~kl~DfG~a~~~~~ 161 (316)
T cd05108 117 QIAKGMNYLEERRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGA 161 (316)
T ss_pred HHHHHHHHHHhcCeeccccchhheEecCC--CcEEEccccccccccC
Confidence 544 788999999999999999999865 8899999999987654
No 129
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=99.32 E-value=1.1e-11 Score=128.23 Aligned_cols=185 Identities=18% Similarity=0.208 Sum_probs=129.5
Q ss_pred ccccccccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 6 MDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 6 ~~fd~~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
+.+. ++||-|-=+-||.|....|++||||.-|-|.. .++. +-+........-...++ .. .-+.-
T Consensus 93 e~iG-~~IGvGKEsdVY~~~~~~g~~~~vKfHR~Grt-sFrk-------vk~~R~y~~~~~h~sWl-~~------sRl~A 156 (304)
T COG0478 93 EAIG-TKIGVGKESDVYVAIDPKGRKVAVKFHRLGRT-SFRK-------VKRNRDYLADKEHGSWL-YV------SRLAA 156 (304)
T ss_pred Hhhc-cccccCccceEEEEECCCCCEEEEEEeecCch-hhhh-------hcchhhhhccccCcchh-hh------HHHHH
Confidence 3444 78999999999999998999999999888743 2221 11111111000111111 10 11112
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
.+|-+.+.++.. .++.||+++.-+++++||||++|..|..+.- ...+..+++..+++.+
T Consensus 157 ~rEf~~L~~L~~------------------~G~~VP~P~~~nRHaVvMe~ieG~eL~~~r~---~~en~~~il~~il~~~ 215 (304)
T COG0478 157 EREFEALQRLYP------------------EGVKVPKPIAWNRHAVVMEYIEGVELYRLRL---DVENPDEILDKILEEV 215 (304)
T ss_pred HHHHHHHHHhhh------------------cCCCCCCccccccceeeeehcccceeecccC---cccCHHHHHHHHHHHH
Confidence 345556666543 2578999999999999999999999987631 2345677777777765
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHHHHHHHHHHHHHhCCHHHHHHHHHHcCC
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGL 237 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~G~ 237 (864)
- -+.+.|++|+|+.+-||+|++| |.+++|||-.+...+.+.-..+ +++|.+.+++.|+.-..
T Consensus 216 ~-~~~~~GiVHGDlSefNIlV~~d--g~~~vIDwPQ~v~~~hp~a~e~-------l~RDv~nii~yFrrky~ 277 (304)
T COG0478 216 R-KAYRRGIVHGDLSEFNILVTED--GDIVVIDWPQAVPISHPDAEEL-------LERDVENIIKYFRRKYG 277 (304)
T ss_pred H-HHHHcCccccCCchheEEEecC--CCEEEEeCcccccCCCCCHHHH-------HHhHHHHHHHHHHHhcc
Confidence 4 3458999999999999999976 8999999999988877665554 67899999999886544
No 130
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.32 E-value=7.6e-12 Score=137.15 Aligned_cols=137 Identities=12% Similarity=0.122 Sum_probs=91.4
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|+.|++|.||+|+.+ +++.|+||+..+..... .... -++..|.
T Consensus 7 ~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~-~~~~---------------------------------~~~~~e~ 52 (305)
T cd05609 7 KLISNGAYGAVYLVRHKETRQRFAMKKINKQNLIL-RNQI---------------------------------QQVFVER 52 (305)
T ss_pred eEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhh-HHHH---------------------------------HHHHHHH
Confidence 67999999999999976 78999999765432100 0000 0133344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+.+++ + ..|++++. ....+|||||++|.+|.++.... .......+...+.+++
T Consensus 53 ~~l~~~~------------------~--~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~i~ 111 (305)
T cd05609 53 DILTFAE------------------N--PFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNI-GALPVDMARMYFAETV 111 (305)
T ss_pred HHHHhCC------------------C--CCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHH
Confidence 4444332 1 23444443 34458999999999998875422 2233333333333333
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
+..+|..|++|+|+||+||+++.+ +.++|+|||+++.
T Consensus 112 ~~l~~lH~~~i~H~dl~p~NIll~~~--~~~~l~dfg~~~~ 150 (305)
T cd05609 112 LALEYLHNYGIVHRDLKPDNLLITSM--GHIKLTDFGLSKI 150 (305)
T ss_pred HHHHHHHHCCccccCCchHHEEECCC--CCEEEeeCCCccc
Confidence 788999999999999999999865 8999999998763
No 131
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.32 E-value=9.1e-12 Score=133.00 Aligned_cols=139 Identities=19% Similarity=0.191 Sum_probs=94.8
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||+|++|+||+|+..++..||||+.+++-.. +-++.+|.+
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~--------------------------------------~~~~~~E~~ 53 (260)
T cd05069 12 VKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMM--------------------------------------PEAFLQEAQ 53 (260)
T ss_pred eeecCcCCCeEEEEEEcCCceEEEEEcccCCcc--------------------------------------HHHHHHHHH
Confidence 579999999999999877778999987654210 001344555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHHH--HH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--AH 167 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~~--l~ 167 (864)
.+.++.+. ..+.+...+.....+++|||++|.+|.++..... .......+...+.+++ +.
T Consensus 54 ~l~~l~h~-----------------~i~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~ 116 (260)
T cd05069 54 IMKKLRHD-----------------KLVPLYAVVSEEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMA 116 (260)
T ss_pred HHHhCCCC-----------------CeeeEEEEEcCCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHH
Confidence 55544321 1122222223556789999999999988754221 1234444444443333 67
Q ss_pred HHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 168 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 168 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.+|+.|++|+|+||+||+++++ +.++|+|||++..+.
T Consensus 117 ~lH~~~i~H~dl~~~Nill~~~--~~~~l~dfg~~~~~~ 153 (260)
T cd05069 117 YIERMNYIHRDLRAANILVGDN--LVCKIADFGLARLIE 153 (260)
T ss_pred HHHhCCEeecccCcceEEEcCC--CeEEECCCccceEcc
Confidence 8899999999999999999865 899999999987664
No 132
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.31 E-value=7.9e-12 Score=133.40 Aligned_cols=140 Identities=19% Similarity=0.201 Sum_probs=97.5
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.|+.|++|+||+|+..++..||+|..+++.... -+|.+|+.
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~--------------------------------------~~~~~E~~ 53 (260)
T cd05070 12 KKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSP--------------------------------------ESFLEEAQ 53 (260)
T ss_pred heeccccCceEEEEEecCCceeEEEEecCCCCCH--------------------------------------HHHHHHHH
Confidence 5699999999999998888899999887642210 01444555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHHH--HH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--AH 167 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~~--l~ 167 (864)
-+.++.+. .-+.+.........+++|||++|.+|.++..... ...+...+...+.+++ +.
T Consensus 54 ~l~~l~~~-----------------~i~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~ 116 (260)
T cd05070 54 IMKKLRHD-----------------KLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMA 116 (260)
T ss_pred HHHhcCCC-----------------ceEEEEeEECCCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHH
Confidence 55554321 1122233333566899999999999988754221 2244444444444443 77
Q ss_pred HHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 168 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 168 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
.+|+.|++|+|++|.||+++++ +.++|+|||++..+..
T Consensus 117 ~lH~~~i~H~di~p~Nili~~~--~~~~l~dfg~~~~~~~ 154 (260)
T cd05070 117 YIERMNYIHRDLRSANILVGDG--LVCKIADFGLARLIED 154 (260)
T ss_pred HHHHCCcccCCCccceEEEeCC--ceEEeCCceeeeeccC
Confidence 8899999999999999999865 8899999999887643
No 133
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.31 E-value=4.2e-11 Score=117.49 Aligned_cols=137 Identities=20% Similarity=0.250 Sum_probs=98.4
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
.+++.|.=+.++.+.+ -|.++++|..-|.--..-+-|.++-+ -.-.+||+
T Consensus 2 ~~i~~GAEa~i~~~~~-~g~~av~K~Ri~K~YR~p~LD~klrr-----------------------------~Rt~~Ear 51 (204)
T COG3642 2 DLIKQGAEAIIYLTDF-LGLPAVVKERIPKRYRHPELDEKLRR-----------------------------ERTRREAR 51 (204)
T ss_pred chhhCCcceeEEeeec-cCcceEEEeecCcccCChHHHHHHHH-----------------------------HHHHHHHH
Confidence 4688899999999976 36679999865443332222322111 01456999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHHHHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQ 168 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~l~~ 168 (864)
.+.+++.. .|.+|.+|. .....|+||||+|..|.|..... +..+++.+-.. +.-
T Consensus 52 il~~a~~~------------------GV~~P~v~dvD~~~~~I~me~I~G~~lkd~l~~~-----~~~~~r~vG~~-vg~ 107 (204)
T COG3642 52 ILAKAREA------------------GVPVPIVYDVDPDNGLIVMEYIEGELLKDALEEA-----RPDLLREVGRL-VGK 107 (204)
T ss_pred HHHHHHHc------------------CCCCCeEEEEcCCCCEEEEEEeCChhHHHHHHhc-----chHHHHHHHHH-HHH
Confidence 99988763 688999987 56778999999999998764322 23445544443 456
Q ss_pred HHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 169 IYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 169 i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
+|..||+|+||.+.||++.. +++++||||+...
T Consensus 108 lH~~givHGDLTtsNiIl~~---~~i~~IDfGLg~~ 140 (204)
T COG3642 108 LHKAGIVHGDLTTSNIILSG---GRIYFIDFGLGEF 140 (204)
T ss_pred HHhcCeecCCCccceEEEeC---CcEEEEECCcccc
Confidence 79999999999999999984 4699999999763
No 134
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.31 E-value=8.1e-12 Score=133.39 Aligned_cols=139 Identities=17% Similarity=0.191 Sum_probs=98.0
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||.|++|.||+|...+++.||||..+++-.. +-++.+|.+
T Consensus 12 ~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~--------------------------------------~~~~~~e~~ 53 (261)
T cd05068 12 RKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMD--------------------------------------PKDFLAEAQ 53 (261)
T ss_pred EEecccCCccEEEEEecCCeEEEEEeeCCCccc--------------------------------------HHHHHHHHH
Confidence 789999999999999877889999987653210 001344555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHHH--H
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~~--l 166 (864)
.+.++.+.. -+.+..... ....+++|||++|.+|.++..... ...+...+...+.+++ +
T Consensus 54 ~l~~l~h~~-----------------i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l 116 (261)
T cd05068 54 IMKKLRHPK-----------------LIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGM 116 (261)
T ss_pred HHHHCCCCC-----------------ccceeEEEecCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHH
Confidence 555543210 111222222 456789999999999988754322 2345555555555544 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..+|..|++|+|+||+||+++++ +.++|+|||++..+.
T Consensus 117 ~~lH~~~i~H~dl~p~Nil~~~~--~~~~l~dfg~~~~~~ 154 (261)
T cd05068 117 AYLEAQNYIHRDLAARNVLVGEN--NICKVADFGLARVIK 154 (261)
T ss_pred HHHHhCCeeeccCCcceEEEcCC--CCEEECCcceEEEcc
Confidence 78899999999999999999865 889999999988775
No 135
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.31 E-value=8e-12 Score=134.88 Aligned_cols=139 Identities=18% Similarity=0.178 Sum_probs=95.1
Q ss_pred cccccccceeeEEEEec-CCC----EEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 11 TPLATASIAQVHRATLV-DGR----QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~----~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
+.||+|++|.||+|+.. +|+ .||||+.+......... ++
T Consensus 13 ~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~------------------------------------~~ 56 (279)
T cd05109 13 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANK------------------------------------EI 56 (279)
T ss_pred eecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHH------------------------------------HH
Confidence 67999999999999964 665 48999876433221111 12
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 162 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~ 162 (864)
..|+..+.++.+ + .+++++. ....+++|||++|++|.+........+....+...+.
T Consensus 57 ~~e~~~l~~~~~------------------~--~i~~~~~~~~~~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~ 116 (279)
T cd05109 57 LDEAYVMAGVGS------------------P--YVCRLLGICLTSTVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCV 116 (279)
T ss_pred HHHHHHHHhcCC------------------C--CCceEEEEEcCCCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHH
Confidence 334444333321 1 2233332 4567899999999999877543233355556666555
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
++. +..+|+.|++|+|+||+||++..+ +.++|+|||++..+..
T Consensus 117 qi~~~L~~lH~~~iiH~dlkp~Nil~~~~--~~~kL~dfG~~~~~~~ 161 (279)
T cd05109 117 QIAKGMSYLEEVRLVHRDLAARNVLVKSP--NHVKITDFGLARLLDI 161 (279)
T ss_pred HHHHHHHHHHHCCeeccccccceEEEcCC--CcEEECCCCceeeccc
Confidence 554 788999999999999999999854 7899999999887653
No 136
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.31 E-value=5.5e-12 Score=139.30 Aligned_cols=137 Identities=16% Similarity=0.178 Sum_probs=90.9
Q ss_pred ccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 12 PLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 12 plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
-||.|++|.||+|+.+ +++.||||+.+...... ..+.. .+..|.+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~---------------------------------~~~~e~~ 47 (318)
T cd05570 2 VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQ-DDDVE---------------------------------CTMTEKR 47 (318)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhh-hhHHH---------------------------------HHHHHHH
Confidence 4899999999999986 68999999876432100 00000 0223333
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH-
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~- 165 (864)
.+..+.. + -.|++++ . ....++||||++|.+|.+... ....++...+...+.+++
T Consensus 48 il~~~~~-----------------h--~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~-~~~~l~~~~~~~~~~qi~~ 107 (318)
T cd05570 48 VLALAGK-----------------H--PFLTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQ-RSGRFDEPRARFYAAEIVL 107 (318)
T ss_pred HHHhccC-----------------C--CCccceeeEEEcCCEEEEEEcCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHH
Confidence 3333211 1 1233333 2 455789999999999876643 222455555555444443
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..
T Consensus 108 ~l~~LH~~~ivH~dlkp~Nill~~~--~~~kl~Dfg~~~~ 145 (318)
T cd05570 108 GLQFLHERGIIYRDLKLDNVLLDSE--GHIKIADFGMCKE 145 (318)
T ss_pred HHHHHHhCCeEccCCCHHHeEECCC--CcEEecccCCCee
Confidence 778999999999999999999865 8999999998764
No 137
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.31 E-value=1.2e-11 Score=137.68 Aligned_cols=140 Identities=19% Similarity=0.167 Sum_probs=94.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.+ +|+.||+|+.+........ -++.+|+
T Consensus 11 ~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~------------------------------------~~~~~E~ 54 (333)
T cd06650 11 SELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIR------------------------------------NQIIREL 54 (333)
T ss_pred ccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHH------------------------------------HHHHHHH
Confidence 56999999999999986 7999999987654322110 0134466
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
+.+.++.+. .-+.+...+. ....+|||||++|.+|.++.... ...+...+.....+++ +
T Consensus 55 ~~l~~l~h~-----------------~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~l~~~l 116 (333)
T cd06650 55 QVLHECNSP-----------------YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGL 116 (333)
T ss_pred HHHHHCCCC-----------------cccceeEEEEECCEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHH
Confidence 555554321 0122222333 56688999999999998875422 2244444434333333 6
Q ss_pred HHHHh-cCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 167 HQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 167 ~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..+|. .+++|+|+||+||+++.+ +.++|+|||++..+.
T Consensus 117 ~~lH~~~~ivH~dlkp~Nili~~~--~~~kL~Dfg~~~~~~ 155 (333)
T cd06650 117 TYLREKHKIMHRDVKPSNILVNSR--GEIKLCDFGVSGQLI 155 (333)
T ss_pred HHHHhcCCEEecCCChhhEEEcCC--CCEEEeeCCcchhhh
Confidence 67786 589999999999999865 889999999986553
No 138
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.31 E-value=9.5e-12 Score=133.48 Aligned_cols=140 Identities=14% Similarity=0.110 Sum_probs=94.6
Q ss_pred cccccccceeeEEEEec----CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHH
Q 002927 11 TPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 86 (864)
Q Consensus 11 ~plasaSigqV~~A~l~----~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 86 (864)
+.||+|+||+||+|+++ .+..||+|+.+.+..... +.+|.
T Consensus 11 ~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~------------------------------------~~~~~ 54 (266)
T cd05064 11 RILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQ------------------------------------RRGFL 54 (266)
T ss_pred eeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHH------------------------------------HHHHH
Confidence 67999999999999864 367899998765432111 01234
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 87 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 87 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+|...+.++.+. .-+.+-..+. ....+|||||++|.+|.++.......+....+...+.+++
T Consensus 55 ~e~~~l~~l~h~-----------------~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~ 117 (266)
T cd05064 55 AEALTLGQFDHS-----------------NIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLA 117 (266)
T ss_pred HHHHHHhcCCCC-----------------CcCeEEEEEecCCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHH
Confidence 455544443220 0122222222 4678899999999999887653333445555555444444
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+..+|+.|++|+|+||.||+++.+ +.+++.|||.....
T Consensus 118 ~al~~lH~~~iiH~dikp~nili~~~--~~~~l~dfg~~~~~ 157 (266)
T cd05064 118 SGMKYLSEMGYVHKGLAAHKVLVNSD--LVCKISGFRRLQED 157 (266)
T ss_pred HHHHHHHHCCEeeccccHhhEEEcCC--CcEEECCCcccccc
Confidence 788999999999999999999865 89999999976553
No 139
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.31 E-value=4.5e-12 Score=137.35 Aligned_cols=142 Identities=20% Similarity=0.210 Sum_probs=92.4
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+...... +..+ .+.+|.
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~-----------------------------~~~~------~~~~E~ 51 (287)
T cd07848 7 GVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENE-----------------------------EVKE------TTLREL 51 (287)
T ss_pred EEecccCCEEEEEEEECCCCcEEEEEEEecccccc-----------------------------cchh------hHHHHH
Confidence 67999999999999986 78999999875431100 0000 122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
..+.++.+. .-+.+..++. ....+|||||++|..+..+.. ...+.....+...+.+++ +
T Consensus 52 ~~l~~l~h~-----------------~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~qi~~~L 113 (287)
T cd07848 52 KMLRTLKQE-----------------NIVELKEAFRRRGKLYLVFEYVEKNMLELLEE-MPNGVPPEKVRSYIYQLIKAI 113 (287)
T ss_pred HHHHhCCCc-----------------cccchhhhEecCCEEEEEEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHH
Confidence 433333221 0111112222 455689999999976654422 223455555555554444 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+|..|++|+|+||+||+++.+ +.++|+|||++..+..
T Consensus 114 ~~lH~~~i~H~dlkp~Nill~~~--~~~kl~Dfg~~~~~~~ 152 (287)
T cd07848 114 HWCHKNDIVHRDIKPENLLISHN--DVLKLCDFGFARNLSE 152 (287)
T ss_pred HHHHHCCeecCCCCHHHEEEcCC--CcEEEeeccCcccccc
Confidence 88899999999999999999865 8999999999887653
No 140
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=99.31 E-value=2.7e-12 Score=136.75 Aligned_cols=140 Identities=21% Similarity=0.285 Sum_probs=95.7
Q ss_pred cccccccceeeEEEEe-cCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+-||+|.+|.|-+|+. +.|+.||||..|.+.-+. +.|+-- .++|.
T Consensus 59 etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkd-eqDlvh---------------------------------IRREI 104 (668)
T KOG0611|consen 59 ETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKD-EQDLVH---------------------------------IRREI 104 (668)
T ss_pred HHhcCCcccceeehhhccCCcEeehhhhhhhhccc-HHHHHH---------------------------------HHHHH
Confidence 5699999999999996 489999999655332110 122211 23344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCH---HHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNK---QKVVEEITRA 164 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~---~~l~~~~~~~ 164 (864)
+-+..+. +++ +.|-+|+. ..+.||||||..|+.|.|+.... ..+.. ..+.+.++.+
T Consensus 105 eIMSsLN------------------HPhII~IyEVFENkdKIvivMEYaS~GeLYDYiSer-~~LsErEaRhfFRQIvSA 165 (668)
T KOG0611|consen 105 EIMSSLN------------------HPHIIQIYEVFENKDKIVIVMEYASGGELYDYISER-GSLSEREARHFFRQIVSA 165 (668)
T ss_pred HHHhhcC------------------CCceeehhhhhcCCceEEEEEEecCCccHHHHHHHh-ccccHHHHHHHHHHHHHH
Confidence 4333332 222 34555665 67889999999999999986533 22322 2333334333
Q ss_pred HHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 165 YAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 165 ~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|.++++|||||-+|||++.+ +.++|.|||++..+.
T Consensus 166 -VhYCHknrVvHRDLKLENILLD~N--~NiKIADFGLSNly~ 204 (668)
T KOG0611|consen 166 -VHYCHKNRVVHRDLKLENILLDQN--NNIKIADFGLSNLYA 204 (668)
T ss_pred -HHHHhhccceecccchhheeecCC--CCeeeeccchhhhhc
Confidence 567799999999999999999965 899999999987554
No 141
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.30 E-value=1.3e-11 Score=132.06 Aligned_cols=142 Identities=20% Similarity=0.222 Sum_probs=98.1
Q ss_pred ccccccccceeeEEEEec----CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 10 ETPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~----~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
.+.||.|++|.||+|+++ +...||||+.++....... -+|
T Consensus 9 ~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~------------------------------------~~~ 52 (266)
T cd05033 9 EKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQR------------------------------------LDF 52 (266)
T ss_pred eeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHH------------------------------------HHH
Confidence 378999999999999975 2457999988765432211 113
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHH
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 164 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~ 164 (864)
..|...+.++.+. .-+.+...+. ....+++|||++|.+|.++............+...+.++
T Consensus 53 ~~e~~~l~~l~h~-----------------~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l 115 (266)
T cd05033 53 LTEASIMGQFDHP-----------------NIIRLEGVVTKSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGI 115 (266)
T ss_pred HHHHHHHHhCCCC-----------------CcceEeEEEecCCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHH
Confidence 3455555444221 0112222222 456789999999999988765433345666665555554
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 116 ~~~l~~Lh~~~i~H~di~p~nili~~~--~~~~l~dfg~~~~~~ 157 (266)
T cd05033 116 ASGMKYLSEMNYVHRDLAARNILVNSN--LVCKVSDFGLSRRLE 157 (266)
T ss_pred HHHHHHHHhCCcccCCCCcceEEEcCC--CCEEECccchhhccc
Confidence 4 788999999999999999999865 889999999988774
No 142
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.30 E-value=8.6e-12 Score=151.20 Aligned_cols=142 Identities=18% Similarity=0.246 Sum_probs=93.1
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|.||+|+.. +|+.||||+.+..... + ..... .+..|.
T Consensus 10 ~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~----~------------------------~~~~~------~~~~E~ 55 (669)
T cd05610 10 KPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMI----N------------------------KNMVH------QVQAER 55 (669)
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEEehhhcc----C------------------------HHHHH------HHHHHH
Confidence 78999999999999986 7999999987632100 0 00000 122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
..+..+++. ..+.+...+. ....+|||||++|.+|.++.... ..+....+...+.+++ +
T Consensus 56 ~~l~~l~hp-----------------~Iv~~~~~~~~~~~~~lVmEy~~g~~L~~li~~~-~~l~~~~~~~i~~qil~aL 117 (669)
T cd05610 56 DALALSKSP-----------------FIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIY-GYFDEEMAVKYISEVALAL 117 (669)
T ss_pred HHHHhcCCC-----------------CcCeEEEEEEECCEEEEEEeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHH
Confidence 333333221 0111222222 45688999999999998875422 2234444444333333 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..+|..||+|+||||.|||++.+ +.++|+|||+++...
T Consensus 118 ~yLH~~gIiHrDLKP~NILl~~~--g~vkL~DFGls~~~~ 155 (669)
T cd05610 118 DYLHRHGIIHRDLKPDNMLISNE--GHIKLTDFGLSKVTL 155 (669)
T ss_pred HHHHhCCEEeCCccHHHEEEcCC--CCEEEEeCCCCcccc
Confidence 88999999999999999999865 899999999988654
No 143
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.30 E-value=1.3e-11 Score=133.73 Aligned_cols=141 Identities=21% Similarity=0.224 Sum_probs=95.1
Q ss_pred cccccccceeeEEEEe-----cCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 11 TPLATASIAQVHRATL-----VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 11 ~plasaSigqV~~A~l-----~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
+.|++|++|.||+|+. .+++.||||..++........ ++
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~------------------------------------~~ 53 (284)
T cd05079 10 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIA------------------------------------DL 53 (284)
T ss_pred eecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHH------------------------------------HH
Confidence 4599999999999984 258899999877653221110 13
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-c--CCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S--SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 162 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~--~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~ 162 (864)
.+|...++++.+. .-+.+..... . ...+|||||++|.+|.++........+...+...+.
T Consensus 54 ~~e~~~l~~l~h~-----------------~i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~ 116 (284)
T cd05079 54 KKEIEILRNLYHE-----------------NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAV 116 (284)
T ss_pred HHHHHHHHhCCCC-----------------CeeeeeeEEecCCCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHH
Confidence 4455555544221 0122222222 1 346799999999999887543222345555555444
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
++. +..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 117 ~i~~aL~~lH~~gi~H~dlkp~Nil~~~~--~~~~l~dfg~~~~~~ 160 (284)
T cd05079 117 QICKGMDYLGSRQYVHRDLAARNVLVESE--HQVKIGDFGLTKAIE 160 (284)
T ss_pred HHHHHHHHHHHCCeeecccchheEEEcCC--CCEEECCCccccccc
Confidence 443 788999999999999999999865 889999999988664
No 144
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.30 E-value=5e-12 Score=143.88 Aligned_cols=140 Identities=16% Similarity=0.215 Sum_probs=96.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
..||.||||.|+.|.++ +++.+|||+++.+.--+ +.|++- ...|.
T Consensus 374 ~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~-~d~Ve~---------------------------------~~~Ek 419 (694)
T KOG0694|consen 374 AVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQ-RDEVES---------------------------------LMCEK 419 (694)
T ss_pred EEeccCcCceEEEEEEcCCCcEEEEEEeeccceec-cccHHH---------------------------------HHHHH
Confidence 67999999999999988 78999999998654210 111111 12244
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+-++...+ +..+-.++. .++.+.||||+.|+++..+.........+.++...-+-+.
T Consensus 420 rI~~la~~-------------------HPFL~~L~~~fQT~~~l~fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~ 480 (694)
T KOG0694|consen 420 RIFELANR-------------------HPFLVNLFSCFQTKEHLFFVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLG 480 (694)
T ss_pred HHHHHhcc-------------------CCeEeecccccccCCeEEEEEEecCCCcEEEEEecccccHHHHHHHHHHHHHH
Confidence 43333221 122334443 3556799999999997766432322223344444445555
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
|+.+|++|||+||+|-.|||++.+ |.++|+||||+++.
T Consensus 481 L~fLH~~~IIYRDlKLdNiLLD~e--Gh~kiADFGlcKe~ 518 (694)
T KOG0694|consen 481 LQFLHENGIIYRDLKLDNLLLDTE--GHVKIADFGLCKEG 518 (694)
T ss_pred HHHHHhcCceeeecchhheEEccc--CcEEeccccccccc
Confidence 999999999999999999999976 99999999999864
No 145
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.30 E-value=1.3e-11 Score=133.12 Aligned_cols=146 Identities=14% Similarity=0.147 Sum_probs=100.3
Q ss_pred ccccccccccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhH
Q 002927 2 GGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAP 80 (864)
Q Consensus 2 ~~~F~~fd~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~ 80 (864)
+++|..+ +.||+|++|.||+|... +|+.||||+.........
T Consensus 3 ~~~~~~~--~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~----------------------------------- 45 (277)
T cd06641 3 EELFTKL--EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDE----------------------------------- 45 (277)
T ss_pred HHhhhhh--eeEeecCCeEEEEEEECCCCcEEEEEEeccccchHH-----------------------------------
Confidence 4666655 45999999999999975 789999997643211100
Q ss_pred hhccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHH
Q 002927 81 KELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVV 158 (864)
Q Consensus 81 ~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~ 158 (864)
.-++.+|.+.+.++.+ +. +.+...+. ....++||||++|.+|.++.. ....+...+.
T Consensus 46 -~~~~~~e~~~l~~l~h------------------~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~i~--~~~~~~~~~~ 104 (277)
T cd06641 46 -IEDIQQEITVLSQCDS------------------PYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE--PGPLDETQIA 104 (277)
T ss_pred -HHHHHHHHHHHHhcCC------------------CCEeEEEEEEEeCCeEEEEEEeCCCCcHHHHHh--cCCCCHHHHH
Confidence 0124445555554422 11 22222222 566899999999999887643 3345556555
Q ss_pred HHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 159 EEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 159 ~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+.+++ +..+|..|++|+|++|+||+++.+ +.++|+|||++..+..
T Consensus 105 ~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~--~~~~l~dfg~~~~~~~ 153 (277)
T cd06641 105 TILREILKGLDYLHSEKKIHRDIKAANVLLSEH--GEVKLADFGVAGQLTD 153 (277)
T ss_pred HHHHHHHHHHHHHccCCeecCCCCHHhEEECCC--CCEEEeecccceeccc
Confidence 5555544 778899999999999999999865 8899999999887654
No 146
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.30 E-value=1.1e-11 Score=131.94 Aligned_cols=138 Identities=21% Similarity=0.213 Sum_probs=95.5
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||.|++|.||+|+.+++..||+|..+.+-. .+-+|.+|+.
T Consensus 10 ~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~--------------------------------------~~~~~~~e~~ 51 (256)
T cd05114 10 KELGSGQFGVVHLGKWRAQIKVAIKAINEGAM--------------------------------------SEEDFIEEAK 51 (256)
T ss_pred eEecCCcCceEEEEEeccCceEEEEecccCCc--------------------------------------cHHHHHHHHH
Confidence 56999999999999988888999997553211 0112445665
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
.+.++.+ +. +.+...+. ....++||||++|.+|.+.........+...+...+.+++ +
T Consensus 52 ~l~~l~h------------------~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l 113 (256)
T cd05114 52 VMMKLSH------------------PKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGM 113 (256)
T ss_pred HHHHCCC------------------CCceeEEEEEccCCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHH
Confidence 5555432 11 11222222 4567899999999999877543222345554444444443 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..+|..|++|+|++|+||+++.+ +.++|+|||++..+.
T Consensus 114 ~~lH~~~i~H~dl~p~ni~i~~~--~~~kl~d~g~~~~~~ 151 (256)
T cd05114 114 EYLERNSFIHRDLAARNCLVSST--GVVKVSDFGMTRYVL 151 (256)
T ss_pred HHHHHCCccccccCcceEEEcCC--CeEEECCCCCccccC
Confidence 78999999999999999999865 889999999887654
No 147
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.30 E-value=7.3e-12 Score=133.40 Aligned_cols=136 Identities=19% Similarity=0.228 Sum_probs=94.9
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.|+.|++|.||+|+.++++.+|||+.+++... +-+|.+|..
T Consensus 10 ~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~--------------------------------------~~~~~~e~~ 51 (256)
T cd05059 10 KELGSGQFGVVHLGKWRGKIDVAIKMIREGAMS--------------------------------------EDDFIEEAK 51 (256)
T ss_pred hhhccCCCceEEEeEecCCccEEEEEeccCCCC--------------------------------------HHHHHHHHH
Confidence 679999999999999887789999986543210 001333444
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH-
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~- 165 (864)
.+.++.+ + .+.+++. ....+++|||++|.+|.++........+...+...+.+++
T Consensus 52 ~l~~l~~------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~ 111 (256)
T cd05059 52 VMMKLSH------------------P--NLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCE 111 (256)
T ss_pred HHHhCCC------------------C--CEEEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHH
Confidence 4444321 2 2333432 4567899999999999887543333345555544444443
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|+|+||.||+++.+ +.++|+|||++....
T Consensus 112 ~l~~lH~~~i~H~dl~p~ni~i~~~--~~~kl~dfg~~~~~~ 151 (256)
T cd05059 112 AMEYLESNGFIHRDLAARNCLVGED--NVVKVSDFGLARYVL 151 (256)
T ss_pred HHHHHHHCCcccccccHhhEEECCC--CcEEECCcccceecc
Confidence 678899999999999999999865 899999999987653
No 148
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.30 E-value=1.4e-11 Score=133.37 Aligned_cols=138 Identities=20% Similarity=0.239 Sum_probs=94.9
Q ss_pred cccccccceeeEEEEec-----CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 11 TPLATASIAQVHRATLV-----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-----~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
+.||+|++|.||+|+.+ +|+.||||+.+....... -.+
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~-------------------------------------~~~ 52 (284)
T cd05081 10 QQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHL-------------------------------------RDF 52 (284)
T ss_pred eeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHH-------------------------------------HHH
Confidence 67999999999999842 689999998664432110 013
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe------cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHH
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVE 159 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~ 159 (864)
.+|++.+.++.+ ++ |++++. ....+|||||++|.+|.++........+...+..
T Consensus 53 ~~e~~~l~~l~h------------------~~--iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~ 112 (284)
T cd05081 53 EREIEILKSLQH------------------DN--IVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLL 112 (284)
T ss_pred HHHHHHHHhCCC------------------CC--eeEEEEEEccCCCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHH
Confidence 345555444422 22 222221 2346799999999999987543223345555544
Q ss_pred HHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 160 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 160 ~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
.+.+++ +..+|..|++|+|+||.||+++.+ ++++|+|||++..+..
T Consensus 113 ~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~--~~~~l~dfg~~~~~~~ 160 (284)
T cd05081 113 YASQICKGMEYLGSKRYVHRDLATRNILVESE--NRVKIGDFGLTKVLPQ 160 (284)
T ss_pred HHHHHHHHHHHHHHCCceeccCCHhhEEECCC--CeEEECCCcccccccC
Confidence 444444 778999999999999999999865 8999999999887654
No 149
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.30 E-value=1.1e-11 Score=144.74 Aligned_cols=138 Identities=18% Similarity=0.125 Sum_probs=94.6
Q ss_pred cccccccceeeEEEEec-C-CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 11 TPLATASIAQVHRATLV-D-GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~-G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
+.||.|++|.||+|... + ++.||+|......... ...+.+|
T Consensus 73 ~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~-------------------------------------~~~~~~E 115 (478)
T PTZ00267 73 TLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQ-------------------------------------AAYARSE 115 (478)
T ss_pred EEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHH-------------------------------------HHHHHHH
Confidence 57999999999999865 4 7889999643221110 0012345
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHh---hcCCCHHHHHHHH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEI 161 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~---~~~~~~~~l~~~~ 161 (864)
++.+.++.| ..|++++. ....+|||||++|++|.+..... ...+....+...+
T Consensus 116 ~~~l~~l~H--------------------pniv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~ 175 (478)
T PTZ00267 116 LHCLAACDH--------------------FGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLF 175 (478)
T ss_pred HHHHHhCCC--------------------CCEeEEEEEEEECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHH
Confidence 555554432 22444442 56789999999999998764321 1234444444444
Q ss_pred HHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 162 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 162 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
.+++ +..+|..|++|||+||.|||++.+ +.++|+|||++..+..
T Consensus 176 ~qi~~aL~~lH~~~ivHrDlkp~NIll~~~--~~~kL~DFgla~~~~~ 221 (478)
T PTZ00267 176 YQIVLALDEVHSRKMMHRDLKSANIFLMPT--GIIKLGDFGFSKQYSD 221 (478)
T ss_pred HHHHHHHHHHHhCCEEECCcCHHhEEECCC--CcEEEEeCcCceecCC
Confidence 4433 788999999999999999999865 8999999999987754
No 150
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.29 E-value=8.2e-12 Score=132.74 Aligned_cols=136 Identities=19% Similarity=0.232 Sum_probs=95.7
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||+|++|+||+|...+++.+|||+.+.+... +-+|.+|.+
T Consensus 10 ~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~--------------------------------------~~~~~~e~~ 51 (256)
T cd05112 10 QEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMS--------------------------------------EEDFIEEAQ 51 (256)
T ss_pred eeecCcccceEEEEEEeCCCeEEEEECCCCCCC--------------------------------------HHHHHHHHH
Confidence 679999999999999877889999987643211 112445665
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH-
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~- 165 (864)
.+.++.+ + .+.+++. ....+++|||++|.+|.+.............+...+.+++
T Consensus 52 ~l~~l~~------------------~--~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~ 111 (256)
T cd05112 52 VMMKLSH------------------P--KLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCE 111 (256)
T ss_pred HHHhCCC------------------C--CeeeEEEEEccCCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHH
Confidence 5555422 1 2233332 5668899999999999877543322344444444444433
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|+.|++|+|+||+||+++.+ +.++|+|||++..+.
T Consensus 112 ~l~~lH~~~i~h~dl~p~ni~i~~~--~~~~l~d~g~~~~~~ 151 (256)
T cd05112 112 GMAYLESSNVIHRDLAARNCLVGEN--QVVKVSDFGMTRFVL 151 (256)
T ss_pred HHHHHHHCCccccccccceEEEcCC--CeEEECCCcceeecc
Confidence 678899999999999999999854 789999999987653
No 151
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.29 E-value=1.5e-11 Score=131.84 Aligned_cols=142 Identities=20% Similarity=0.256 Sum_probs=96.1
Q ss_pred ccccccccceeeEEEEec-CCC---EEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 10 ETPLATASIAQVHRATLV-DGR---QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-~G~---~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
.+.||+|++|+||+|+++ +|+ .||||..++........ ++
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~------------------------------------~~ 53 (268)
T cd05063 10 QKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQ------------------------------------DF 53 (268)
T ss_pred eeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHH------------------------------------HH
Confidence 378999999999999986 444 79999876653221110 13
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHH
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITR 163 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~ 163 (864)
..|++.+.++.+ +. +.+...+. ....+|+|||++|.+|.++............+...+.+
T Consensus 54 ~~e~~~l~~l~h------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ 115 (268)
T cd05063 54 LSEASIMGQFSH------------------HNIIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRG 115 (268)
T ss_pred HHHHHHHhcCCC------------------CCeeEEEEEEccCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHH
Confidence 345544444321 11 22222222 45678999999999998875433233455555554444
Q ss_pred HH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 164 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 164 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
++ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 116 l~~al~~lH~~~i~H~dlkp~Nili~~~--~~~kl~dfg~~~~~~~ 159 (268)
T cd05063 116 IAAGMKYLSDMNYVHRDLAARNILVNSN--LECKVSDFGLSRVLED 159 (268)
T ss_pred HHHHHHHHHHCCeeccccchhhEEEcCC--CcEEECCCccceeccc
Confidence 43 788999999999999999999865 8899999999876643
No 152
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.29 E-value=1.4e-11 Score=131.40 Aligned_cols=139 Identities=19% Similarity=0.220 Sum_probs=97.3
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||+|++|.||+|..++++.||||+.+...... -++.+|..
T Consensus 12 ~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~--------------------------------------~~~~~E~~ 53 (260)
T cd05067 12 KKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSP--------------------------------------EAFLAEAN 53 (260)
T ss_pred eeeccCccceEEeeecCCCceEEEEEecCCCCcH--------------------------------------HHHHHHHH
Confidence 5699999999999998899999999876432210 02344555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHHH--HH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--AH 167 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~~--l~ 167 (864)
.+.++.+. .-+.+..++.....+++|||++|.+|.+...... ...+...+...+.+++ +.
T Consensus 54 ~l~~l~h~-----------------~i~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~ 116 (260)
T cd05067 54 LMKQLQHP-----------------RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMA 116 (260)
T ss_pred HHHhcCCc-----------------CeeeEEEEEccCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHH
Confidence 55554321 0122223333556799999999999988754221 2344455554444444 78
Q ss_pred HHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 168 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 168 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.+|..|++|+|+||.||+++.+ +.+.|+|||++..+.
T Consensus 117 ~LH~~~i~H~dl~p~ni~i~~~--~~~~l~dfg~~~~~~ 153 (260)
T cd05067 117 FIERKNYIHRDLRAANILVSET--LCCKIADFGLARLIE 153 (260)
T ss_pred HHhcCCeecccccHHhEEEcCC--CCEEEccCcceeecC
Confidence 8999999999999999999865 889999999987765
No 153
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.29 E-value=2e-11 Score=129.34 Aligned_cols=138 Identities=17% Similarity=0.212 Sum_probs=95.4
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||.|++|.||+|...+|+.||||+.+....... .-.+..|.+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~------------------------------------~~~~~~e~~ 44 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDL------------------------------------KRKFLQEAE 44 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHH------------------------------------HHHHHHHHH
Confidence 46899999999999987799999997654322100 001334544
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH-
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~- 165 (864)
.++++. ++. +++++ . ....++||||++|.+|.++........+...+...+.++.
T Consensus 45 ~l~~l~------------------~~~--i~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 104 (251)
T cd05041 45 ILKQYD------------------HPN--IVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAA 104 (251)
T ss_pred HHHhCC------------------CCC--eEEEEEEEecCCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 444432 122 23332 2 5678999999999999887543333345555555444443
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|+.|++|+|++|.||+++.+ ++++|+|||++....
T Consensus 105 ~l~~lH~~~i~h~di~p~nili~~~--~~~~l~d~g~~~~~~ 144 (251)
T cd05041 105 GMEYLESKNCIHRDLAARNCLVGEN--NVLKISDFGMSREEE 144 (251)
T ss_pred HHHHHHhCCEehhhcCcceEEEcCC--CcEEEeecccccccc
Confidence 778899999999999999999865 899999999987654
No 154
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.29 E-value=1.8e-11 Score=133.25 Aligned_cols=139 Identities=17% Similarity=0.166 Sum_probs=94.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|+.|++|.||+|+.. +|+.|++|+......+.. -++..|.
T Consensus 18 ~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~-------------------------------------~~~~~e~ 60 (292)
T cd06644 18 GELGDGAFGKVYKAKNKETGALAAAKVIETKSEEEL-------------------------------------EDYMVEI 60 (292)
T ss_pred heecCCCCeEEEEEEECCCCceEEEEEeccCCHHHH-------------------------------------HHHHHHH
Confidence 45999999999999976 699999998764322110 0133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
..+.++.+. .-+.+-..+. ....++||||++|.++...........+...+...+.+++ +
T Consensus 61 ~~l~~l~h~-----------------~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l 123 (292)
T cd06644 61 EILATCNHP-----------------YIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEAL 123 (292)
T ss_pred HHHHhCCCC-----------------cEeeeEEEEEeCCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHH
Confidence 555444321 0122222222 5678999999999998766432233455555555444443 6
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
..+|..|++|+|+||.||+++.+ ++++|+|||++...
T Consensus 124 ~~lH~~~i~H~dlkp~Nili~~~--~~~kl~dfg~~~~~ 160 (292)
T cd06644 124 QYLHSMKIIHRDLKAGNVLLTLD--GDIKLADFGVSAKN 160 (292)
T ss_pred HHHhcCCeeecCCCcceEEEcCC--CCEEEccCccceec
Confidence 78899999999999999999854 89999999987654
No 155
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.29 E-value=1e-11 Score=132.49 Aligned_cols=136 Identities=18% Similarity=0.181 Sum_probs=95.9
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||+|++|.||.|+..++..||||..+.+-.. +-+|.+|..
T Consensus 10 ~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~--------------------------------------~~~~~~e~~ 51 (256)
T cd05113 10 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS--------------------------------------EDEFIEEAK 51 (256)
T ss_pred eEecCcccceEEEEEecCCCcEEEEEcCCCccc--------------------------------------HHHHHHHHH
Confidence 569999999999999877778999976543110 011344555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH-
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~- 165 (864)
.+.++.+ ..|.+++. ....+++|||+.|.+|.+.............+...+.++.
T Consensus 52 ~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~ 111 (256)
T cd05113 52 VMMKLSH--------------------EKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCE 111 (256)
T ss_pred HHhcCCC--------------------CCeeeEEEEEccCCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 5544422 13344443 3457899999999999887543233455555555555544
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|+|+||+||+++.+ ++++|+|||++..+.
T Consensus 112 ~l~~lH~~~i~H~dl~p~nili~~~--~~~kl~d~g~~~~~~ 151 (256)
T cd05113 112 GMAYLESKQFIHRDLAARNCLVDDQ--GCVKVSDFGLSRYVL 151 (256)
T ss_pred HHHHHHhCCeeccccCcceEEEcCC--CCEEECCCccceecC
Confidence 778899999999999999999865 899999999987653
No 156
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.29 E-value=1.5e-11 Score=131.68 Aligned_cols=140 Identities=18% Similarity=0.192 Sum_probs=95.3
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.|+.|++|.||+|+..+...||||+.++.... +-+|.+|..
T Consensus 12 ~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~--------------------------------------~~~~~~E~~ 53 (262)
T cd05071 12 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS--------------------------------------PEAFLQEAQ 53 (262)
T ss_pred eecCCCCCCcEEEEEecCCceEEEEecccCccC--------------------------------------HHHHHHHHH
Confidence 569999999999999876678999987642110 002445666
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHHH--HH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--AH 167 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~~--l~ 167 (864)
.+.++.+. .-+.+...+.....+++|||++|.+|.++..... ...+...+...+.+++ +.
T Consensus 54 ~l~~l~~~-----------------~i~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~ 116 (262)
T cd05071 54 VMKKLRHE-----------------KLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 116 (262)
T ss_pred HHHhCCCC-----------------CcceEEEEECCCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHH
Confidence 65554321 0112222223456789999999999988754221 2234444444444443 67
Q ss_pred HHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 168 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 168 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
.+|..|++|+|+||+||+++.+ +.++|+|||.+..+..
T Consensus 117 ~lH~~~i~H~dl~p~Nill~~~--~~~~L~dfg~~~~~~~ 154 (262)
T cd05071 117 YVERMNYVHRDLRAANILVGEN--LVCKVADFGLARLIED 154 (262)
T ss_pred HHHHCCccccccCcccEEEcCC--CcEEeccCCceeeccc
Confidence 8999999999999999999865 8899999999887654
No 157
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.29 E-value=1.5e-11 Score=133.61 Aligned_cols=143 Identities=15% Similarity=0.127 Sum_probs=94.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|+||+|..+ +|+.||||...+....... .+-.+.+|.
T Consensus 6 ~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~----------------------------------~~~~~~~E~ 51 (285)
T cd05630 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRK----------------------------------GESMALNEK 51 (285)
T ss_pred EEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchH----------------------------------HHHHHHHHH
Confidence 56999999999999976 7999999976543211000 000123455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHh-hcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~l~~~~~~~~-- 165 (864)
..+.++.+. ..+.+...+. ....++||||++|.+|.+..... ..++....+...+.+++
T Consensus 52 ~il~~l~~~-----------------~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~ 114 (285)
T cd05630 52 QILEKVNSR-----------------FVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCG 114 (285)
T ss_pred HHHHhCCCC-----------------CeeeeeEEEecCCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHH
Confidence 544444221 1122222222 45578999999999998765322 22345555555444443
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|+|+||.||+++.+ +.++|+|||++....
T Consensus 115 l~~lH~~~iiH~dikp~Nil~~~~--~~~~l~Dfg~~~~~~ 153 (285)
T cd05630 115 LEDLHQERIVYRDLKPENILLDDH--GHIRISDLGLAVHVP 153 (285)
T ss_pred HHHHHhCCEEeCCCCHHHEEECCC--CCEEEeeccceeecC
Confidence 678899999999999999999865 889999999987654
No 158
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.29 E-value=1.1e-11 Score=133.77 Aligned_cols=143 Identities=15% Similarity=0.186 Sum_probs=98.8
Q ss_pred cccccccccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHh
Q 002927 3 GMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPK 81 (864)
Q Consensus 3 ~~F~~fd~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~ 81 (864)
+.|..+ +.|++|++|+||+|+.+ +++.||||+........ .
T Consensus 4 ~~y~~~--~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~------------------------------------~ 45 (277)
T cd06640 4 ELFTKL--ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAED------------------------------------E 45 (277)
T ss_pred Hhhhhh--hhcccCCCeEEEEEEEccCCEEEEEEEEeccccHH------------------------------------H
Confidence 344444 56999999999999976 68999999865321110 0
Q ss_pred hccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHH
Q 002927 82 ELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKV 157 (864)
Q Consensus 82 Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l 157 (864)
.-++.+|+..+.++.+ -.+++++. ....+|||||++|.+|.+... ....+...+
T Consensus 46 ~~~~~~e~~~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~--~~~l~~~~~ 103 (277)
T cd06640 46 IEDIQQEITVLSQCDS--------------------PYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLR--AGPFDEFQI 103 (277)
T ss_pred HHHHHHHHHHHHhCCC--------------------CCEeeEEEEEEECCEEEEEEecCCCCcHHHHHh--cCCCCHHHH
Confidence 1123445554444322 12333332 466899999999999987643 334555555
Q ss_pred HHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 158 VEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 158 ~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
...+.+++ +..+|..|++|+|++|+||+++.+ ++++|+|||++..+..
T Consensus 104 ~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~--~~~~l~dfg~~~~~~~ 153 (277)
T cd06640 104 ATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQ--GDVKLADFGVAGQLTD 153 (277)
T ss_pred HHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCC--CCEEEcccccceeccC
Confidence 55544444 778899999999999999999865 8999999999877654
No 159
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.28 E-value=1.4e-12 Score=131.16 Aligned_cols=157 Identities=19% Similarity=0.215 Sum_probs=105.9
Q ss_pred cccc-ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhc
Q 002927 6 MDFV-ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 83 (864)
Q Consensus 6 ~~fd-~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~El 83 (864)
++|| .+|||.|-||+||.|+.+ ++-.||+||.... ++ .......++++|+
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKs---qi-------------------------~~~~v~~qlrREi 73 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKS---QI-------------------------LKTQVEHQLRREI 73 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeHH---HH-------------------------HHhcchhhhhhee
Confidence 4566 489999999999999976 8999999996421 11 0122334455555
Q ss_pred cHHHHHH--HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhc-CCCHHHHHH-
Q 002927 84 DFNSEAE--NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAF-GVNKQKVVE- 159 (864)
Q Consensus 84 d~~~Ea~--n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~-~~~~~~l~~- 159 (864)
....-.+ |+-|+...|- .+.+.+|++||..++.+...+..... .++....+.
T Consensus 74 EIqs~L~hpnilrlY~~fh------------------------d~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Y 129 (281)
T KOG0580|consen 74 EIQSHLRHPNILRLYGYFH------------------------DSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATY 129 (281)
T ss_pred EeecccCCccHHhhhhhee------------------------ccceeEEEEEecCCchHHHHHHhcccccccccchhHH
Confidence 4433332 4444444332 14556799999988887765442222 244333333
Q ss_pred --HHHHHHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHHHHHHHHH
Q 002927 160 --EITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMF 217 (864)
Q Consensus 160 --~~~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~ 217 (864)
.++.+ +..+|..+++|||+||+|+|+..+ |.+++.|||-+..-+...|..+|..+
T Consensus 130 i~q~A~A-l~y~h~k~VIhRdiKpenlLlg~~--~~lkiAdfGwsV~~p~~kR~tlcgt~ 186 (281)
T KOG0580|consen 130 IKQLANA-LLYCHLKRVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSNKRKTLCGTL 186 (281)
T ss_pred HHHHHHH-HHHhccCCcccCCCCHHHhccCCC--CCeeccCCCceeecCCCCceeeeccc
Confidence 33333 567799999999999999999976 89999999988877777777776544
No 160
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.28 E-value=1.1e-11 Score=138.32 Aligned_cols=76 Identities=26% Similarity=0.387 Sum_probs=56.9
Q ss_pred CCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 127 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 127 ~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
...+++||++ |.+|.++.. ...+....+...+.+++ +..+|..|++|||+||+||+++.+ +.++|+|||++..
T Consensus 93 ~~~~~~~~~~-~~~l~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~--~~~kl~Dfg~~~~ 167 (343)
T cd07878 93 NEVYLVTNLM-GADLNNIVK--CQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNED--CELRILDFGLARQ 167 (343)
T ss_pred CcEEEEeecC-CCCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCC--CCEEEcCCcccee
Confidence 3457999988 667766532 23455555555444444 778999999999999999999865 8999999999887
Q ss_pred cCh
Q 002927 205 LSS 207 (864)
Q Consensus 205 l~~ 207 (864)
+..
T Consensus 168 ~~~ 170 (343)
T cd07878 168 ADD 170 (343)
T ss_pred cCC
Confidence 654
No 161
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.28 E-value=6.5e-12 Score=135.47 Aligned_cols=143 Identities=15% Similarity=0.188 Sum_probs=95.7
Q ss_pred cccccccccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHh
Q 002927 3 GMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPK 81 (864)
Q Consensus 3 ~~F~~fd~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~ 81 (864)
+.|..+ +.|++|++|.||+|.+. +|+.||||+...........
T Consensus 4 ~~y~~~--~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~---------------------------------- 47 (277)
T cd06642 4 ELFTKL--ERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIE---------------------------------- 47 (277)
T ss_pred HHHHHH--HHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHH----------------------------------
Confidence 445544 56999999999999975 78999999865332111100
Q ss_pred hccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHH
Q 002927 82 ELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKV 157 (864)
Q Consensus 82 Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l 157 (864)
++.+|++.+.++.+ -.|++++ . ....+|||||++|.+|.+... ........+
T Consensus 48 --~~~~e~~~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~ 103 (277)
T cd06642 48 --DIQQEITVLSQCDS--------------------PYITRYYGSYLKGTKLWIIMEYLGGGSALDLLK--PGPLEETYI 103 (277)
T ss_pred --HHHHHHHHHHcCCC--------------------CccHhhhcccccCCceEEEEEccCCCcHHHHhh--cCCCCHHHH
Confidence 13334444444321 1122222 1 455789999999999877643 333444444
Q ss_pred HHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 158 VEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 158 ~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
...+.+++ +..+|..|++|+|+||+||+++.+ +.++|+|||++..+..
T Consensus 104 ~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~--~~~~l~dfg~~~~~~~ 153 (277)
T cd06642 104 ATILREILKGLDYLHSERKIHRDIKAANVLLSEQ--GDVKLADFGVAGQLTD 153 (277)
T ss_pred HHHHHHHHHHHHHHhcCCeeccCCChheEEEeCC--CCEEEccccccccccC
Confidence 44444433 678899999999999999999865 8999999999887764
No 162
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.28 E-value=2.1e-11 Score=136.98 Aligned_cols=137 Identities=18% Similarity=0.228 Sum_probs=87.4
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.. +|+.||||+.......... ...+.+|.
T Consensus 27 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~-----------------------------------~~~~~~E~ 71 (359)
T cd07876 27 KPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTH-----------------------------------AKRAYREL 71 (359)
T ss_pred EEeecCCCEEEEEEEEcCCCceeEEEEecccccchhH-----------------------------------HHHHHHHH
Confidence 78999999999999975 7999999987533211100 00122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-------cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 162 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~ 162 (864)
..+..+.+. .-+.+..++. ....++||||++|... +.. ....+...+...+.
T Consensus 72 ~~l~~l~h~-----------------niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~-~~~---~~~~~~~~~~~~~~ 130 (359)
T cd07876 72 VLLKCVNHK-----------------NIISLLNVFTPQKSLEEFQDVYLVMELMDANLC-QVI---HMELDHERMSYLLY 130 (359)
T ss_pred HHHHhCCCC-----------------CEeeeeeeeccCCCccccceeEEEEeCCCcCHH-HHH---hccCCHHHHHHHHH
Confidence 444333220 0122222221 1235899999987432 221 22345555544444
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+++ +..+|..|++|||+||+||+++.+ +.++|+|||++...
T Consensus 131 qi~~~L~~LH~~~ivHrDlkp~NIl~~~~--~~~kl~Dfg~a~~~ 173 (359)
T cd07876 131 QMLCGIKHLHSAGIIHRDLKPSNIVVKSD--CTLKILDFGLARTA 173 (359)
T ss_pred HHHHHHHHHHhCCcccCCCCHHHEEECCC--CCEEEecCCCcccc
Confidence 443 788999999999999999999865 89999999998654
No 163
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.28 E-value=2.1e-11 Score=129.34 Aligned_cols=140 Identities=19% Similarity=0.233 Sum_probs=100.0
Q ss_pred cccccccceeeEEEEec-C---CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHH
Q 002927 11 TPLATASIAQVHRATLV-D---GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 86 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~---G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 86 (864)
+.||.|++|.||+|+.. + +..|+||+.+........ -++.
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~------------------------------------~~~~ 44 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEER------------------------------------KDFL 44 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHH------------------------------------HHHH
Confidence 46899999999999976 3 889999988765432200 0133
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHh--------hcCCCH
Q 002927 87 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLE--------AFGVNK 154 (864)
Q Consensus 87 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~--------~~~~~~ 154 (864)
+|.+.+.++.+ ..+.+++ . ....+++|||++|.+|.++.... ....+.
T Consensus 45 ~e~~~l~~~~~--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 104 (262)
T cd00192 45 KEARVMKKLGH--------------------PNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSL 104 (262)
T ss_pred HHHHHHhhcCC--------------------CChheeeeeecCCCceEEEEEeccCCcHHHHHhhccccccccccccCCH
Confidence 45555555432 1122232 2 45678999999999999886543 244566
Q ss_pred HHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 155 QKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 155 ~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
..+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++..+...
T Consensus 105 ~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~--~~~~l~dfg~~~~~~~~ 158 (262)
T cd00192 105 KDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGED--LVVKISDFGLSRDVYDD 158 (262)
T ss_pred HHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCC--CcEEEcccccccccccc
Confidence 66666555544 788999999999999999999865 89999999999877653
No 164
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.28 E-value=1.9e-12 Score=140.32 Aligned_cols=149 Identities=16% Similarity=0.235 Sum_probs=101.4
Q ss_pred cccccccccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHh
Q 002927 3 GMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPK 81 (864)
Q Consensus 3 ~~F~~fd~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~ 81 (864)
..|..+ +-||.||||.||+|... +++.||+||..-+..+....|+ .+
T Consensus 13 ~~~~~~--~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIedi------------------------------qq 60 (467)
T KOG0201|consen 13 LLYTKL--ELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDI------------------------------QQ 60 (467)
T ss_pred cccccc--hhccccccceeeeeeeccccceEEEEEechhhcchhhHHH------------------------------HH
Confidence 456666 45999999999999965 8999999997643322211121 12
Q ss_pred hccHHHHHH--HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCC-CHHHHH
Q 002927 82 ELDFNSEAE--NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGV-NKQKVV 158 (864)
Q Consensus 82 Eld~~~Ea~--n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~-~~~~l~ 158 (864)
|+.+..+.+ |+.+.... .++.+...++|||+.|+++.++++.. +. +...++
T Consensus 61 ei~~Ls~~~~~~it~yygs------------------------yl~g~~LwiiMey~~gGsv~~lL~~~--~~~~E~~i~ 114 (467)
T KOG0201|consen 61 EISVLSQCDSPNITEYYGS------------------------YLKGTKLWIIMEYCGGGSVLDLLKSG--NILDEFEIA 114 (467)
T ss_pred HHHHHHhcCcchHHhhhhh------------------------eeecccHHHHHHHhcCcchhhhhccC--CCCccceee
Confidence 333333322 22222221 11256677999999999999986532 33 444444
Q ss_pred HHHHHH--HHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHHH
Q 002927 159 EEITRA--YAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQ 211 (864)
Q Consensus 159 ~~~~~~--~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~ 211 (864)
-.+.+. .+..+|.++.+|||+|+.||++..+ |.++|.|||.+++++.....
T Consensus 115 ~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~--g~vkl~DfgVa~ql~~~~~r 167 (467)
T KOG0201|consen 115 VILREVLKGLDYLHSEKKIHRDIKAANILLSES--GDVKLADFGVAGQLTNTVKR 167 (467)
T ss_pred eehHHHHHHhhhhhhcceecccccccceeEecc--CcEEEEecceeeeeechhhc
Confidence 333333 3888999999999999999999976 89999999999999876554
No 165
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.28 E-value=6.6e-12 Score=139.87 Aligned_cols=138 Identities=17% Similarity=0.206 Sum_probs=108.7
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+-||+|-||.||.|++....+||||.++++.. .+-+|.+||.
T Consensus 212 ~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m--------------------------------------~~~~f~~Ea~ 253 (468)
T KOG0197|consen 212 RELGSGQFGEVWLGKWNGSTKVAVKTIKEGSM--------------------------------------SPEAFLREAQ 253 (468)
T ss_pred HHhcCCccceEEEEEEcCCCcccceEEecccc--------------------------------------ChhHHHHHHH
Confidence 45999999999999996556999999888621 2234778999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cC---CceEEEeecCCcCCCChHHH-hhcCCCHHHHHHHHHHHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SS---ETVLILEFMDGIRLNDCESL-EAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~---~~vLvmE~i~G~~L~~~~~~-~~~~~~~~~l~~~~~~~~ 165 (864)
-+.+++|. .+-++|. |+ ..+|||||++-++|.++++. ....+...+++....+++
T Consensus 254 iMk~L~H~--------------------~lV~l~gV~~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIa 313 (468)
T KOG0197|consen 254 IMKKLRHE--------------------KLVKLYGVCTKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIA 313 (468)
T ss_pred HHHhCccc--------------------CeEEEEEEEecCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHH
Confidence 99988762 2334443 33 36899999999999999764 344566777887777777
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+..|-+.++|||||-..||||+++ ..++|.||||++.+.++
T Consensus 314 eGM~YLes~~~IHRDLAARNiLV~~~--~~vKIsDFGLAr~~~d~ 356 (468)
T KOG0197|consen 314 EGMAYLESKNYIHRDLAARNILVDED--LVVKISDFGLARLIGDD 356 (468)
T ss_pred HHHHHHHhCCccchhhhhhheeeccC--ceEEEcccccccccCCC
Confidence 777889999999999999999976 78999999999965543
No 166
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.28 E-value=2.4e-11 Score=131.40 Aligned_cols=79 Identities=18% Similarity=0.160 Sum_probs=60.2
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
....++||||++|.+|.+.... ...+....+...+.+++ +..+|+.|++|+|++|.||+++.+ +.++|+|||++.
T Consensus 69 ~~~~~~v~e~~~g~~L~~~l~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~--~~~kl~dfg~~~ 145 (278)
T cd05606 69 PDKLSFILDLMNGGDLHYHLSQ-HGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEH--GHVRISDLGLAC 145 (278)
T ss_pred CCEEEEEEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCC--CCEEEccCcCcc
Confidence 4557899999999999876432 22345555555444443 778899999999999999999865 899999999987
Q ss_pred ccCh
Q 002927 204 KLSS 207 (864)
Q Consensus 204 ~l~~ 207 (864)
.+..
T Consensus 146 ~~~~ 149 (278)
T cd05606 146 DFSK 149 (278)
T ss_pred ccCc
Confidence 6543
No 167
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.27 E-value=1.8e-11 Score=131.16 Aligned_cols=138 Identities=14% Similarity=0.154 Sum_probs=94.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|.||+|+.+ +|+.||||+.+....... . .+.+|+
T Consensus 15 ~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~----~---------------------------------~~~~e~ 57 (267)
T cd06646 15 QRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDF----S---------------------------------LIQQEI 57 (267)
T ss_pred heeecCCCeEEEEEEECCCCeEEEEEEEecCccchH----H---------------------------------HHHHHH
Confidence 67999999999999975 799999999864322110 0 123455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
..+.++.+ +. +.+...+. ....++||||++|.+|.++... ....+...+...+.++.
T Consensus 58 ~~l~~~~h------------------~~ii~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~ 118 (267)
T cd06646 58 FMVKECKH------------------CNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHV-TGPLSELQIAYVCRETLQG 118 (267)
T ss_pred HHHHhcCC------------------CCeeeeeEEEEeCCEEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHH
Confidence 44444322 11 11222222 4567899999999999887532 23345454444444433
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|+|++|+||+++.+ +.++|+|||++..+.
T Consensus 119 l~~lH~~~i~H~dl~p~nill~~~--~~~~l~dfg~~~~~~ 157 (267)
T cd06646 119 LAYLHSKGKMHRDIKGANILLTDN--GDVKLADFGVAAKIT 157 (267)
T ss_pred HHHHHHCCccccCCCHHHEEECCC--CCEEECcCccceeec
Confidence 778899999999999999999865 889999999988764
No 168
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.27 E-value=1.6e-11 Score=143.82 Aligned_cols=76 Identities=17% Similarity=0.227 Sum_probs=58.4
Q ss_pred ceEEEeecCCcCCCChHHHhh---cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 129 TVLILEFMDGIRLNDCESLEA---FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 129 ~vLvmE~i~G~~L~~~~~~~~---~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
.+|||||++|++|.+...... ..+....+...+.+++ +..+|..|++|||+||.|||++.+ +.++|+|||+++
T Consensus 114 i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~--~~vkL~DFGls~ 191 (496)
T PTZ00283 114 IALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSN--GLVKLGDFGFSK 191 (496)
T ss_pred EEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCC--CCEEEEecccCe
Confidence 469999999999988754221 1244455555555444 788999999999999999999865 899999999987
Q ss_pred ccC
Q 002927 204 KLS 206 (864)
Q Consensus 204 ~l~ 206 (864)
.+.
T Consensus 192 ~~~ 194 (496)
T PTZ00283 192 MYA 194 (496)
T ss_pred ecc
Confidence 654
No 169
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.27 E-value=1.4e-11 Score=136.85 Aligned_cols=138 Identities=18% Similarity=0.241 Sum_probs=90.4
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+...... .....+.+|+
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----------------------------------~~~~~~~~E~ 50 (338)
T cd07859 6 EVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHV-----------------------------------SDATRILREI 50 (338)
T ss_pred EEEeecCCeEEEEEEECCCCCEEEEEEechhhccc-----------------------------------hhHHHHHHHH
Confidence 57999999999999976 79999999765321100 0011244566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe------cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 162 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~ 162 (864)
+.+.++++ +. +.+..++. ....+|||||++| +|.++.. ....+....+...+.
T Consensus 51 ~~l~~l~h------------------pniv~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~-~~~~~~~~~~~~i~~ 110 (338)
T cd07859 51 KLLRLLRH------------------PDIVEIKHIMLPPSRREFKDIYVVFELMES-DLHQVIK-ANDDLTPEHHQFFLY 110 (338)
T ss_pred HHHHhCCC------------------CCEeeecceEeccCCCCCceEEEEEecCCC-CHHHHHH-hcccCCHHHHHHHHH
Confidence 66655533 11 22222221 1235899999965 5555432 222344444444444
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+++ +..+|+.|++|+|+||.|||++.+ +.++|+|||++...
T Consensus 111 qi~~aL~~LH~~~ivH~dlkp~NIll~~~--~~~kL~Dfg~~~~~ 153 (338)
T cd07859 111 QLLRALKYIHTANVFHRDLKPKNILANAD--CKLKICDFGLARVA 153 (338)
T ss_pred HHHHHHHHHHHCCeecCCCCHHHeEECCC--CcEEEccCcccccc
Confidence 433 788999999999999999999865 89999999998754
No 170
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.27 E-value=1.6e-11 Score=137.17 Aligned_cols=39 Identities=21% Similarity=0.313 Sum_probs=34.9
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|+.|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 192 l~~lH~~~i~H~dikp~Nil~~~~--~~~kl~dfg~~~~~~ 230 (343)
T cd05103 192 MEFLASRKCIHRDLAARNILLSEN--NVVKICDFGLARDIY 230 (343)
T ss_pred HHHHHhCCeecCCCccCeEEEcCC--CcEEEEecccccccc
Confidence 678899999999999999999865 899999999987653
No 171
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.27 E-value=2.6e-11 Score=129.74 Aligned_cols=141 Identities=13% Similarity=0.158 Sum_probs=94.8
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.|+.|++|+||+|...+|+.||||+.+......... .+.. -.+.+|+.
T Consensus 6 ~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~-------------------------~~~~------~~~~~e~~ 54 (265)
T cd06631 6 EVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAA-------------------------EKEY------EKLQEEVD 54 (265)
T ss_pred ceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhH-------------------------HHHH------HHHHHHHH
Confidence 6799999999999998789999999866432211000 0000 11444555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH-
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~- 165 (864)
.++++++ + .+++++. ....+++|||++|.+|.++... ........+...+.++.
T Consensus 55 ~l~~l~~------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~ 113 (265)
T cd06631 55 LLKSLKH------------------V--NIVQYLGTCLDDNTISIFMEFVPGGSISSILNR-FGPLPEPVFCKYTKQILD 113 (265)
T ss_pred HHHhcCC------------------C--CEeeEeeEeecCCeEEEEEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHH
Confidence 5555432 1 2233332 4567899999999999887542 22344444444333333
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+
T Consensus 114 ~l~~lH~~~i~H~dl~p~nil~~~~--~~~~l~dfg~~~~~ 152 (265)
T cd06631 114 GVAYLHNNCVVHRDIKGNNVMLMPN--GIIKLIDFGCARRL 152 (265)
T ss_pred HHHHHHhCCcccCCcCHHhEEECCC--CeEEeccchhhHhh
Confidence 778899999999999999999865 89999999987765
No 172
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.27 E-value=2.4e-11 Score=138.55 Aligned_cols=39 Identities=18% Similarity=0.288 Sum_probs=35.0
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|+|+||.|||++.+ +.++|+|||++..+.
T Consensus 250 L~~LH~~~ivH~dikp~Nill~~~--~~~kL~DfGla~~~~ 288 (400)
T cd05105 250 MEFLASKNCVHRDLAARNVLLAQG--KIVKICDFGLARDIM 288 (400)
T ss_pred HHHHHhCCeeCCCCChHhEEEeCC--CEEEEEeCCcceecc
Confidence 778899999999999999999865 789999999987654
No 173
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.27 E-value=2.4e-11 Score=130.23 Aligned_cols=142 Identities=19% Similarity=0.208 Sum_probs=96.5
Q ss_pred cccccccceeeEEEEec-CC---CEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHH
Q 002927 11 TPLATASIAQVHRATLV-DG---RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 86 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G---~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 86 (864)
+.|++|.+|.||+|+.+ +| ..||||..++....... -+|.
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~------------------------------------~~~~ 53 (267)
T cd05066 10 KVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQR------------------------------------RDFL 53 (267)
T ss_pred eeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHH------------------------------------HHHH
Confidence 67999999999999974 33 37999987654322110 0234
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 87 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 87 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+|...+.++.+ ..-+.+...+. ....+|+|||++|.+|.++............+...+.++.
T Consensus 54 ~e~~~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~ 116 (267)
T cd05066 54 SEASIMGQFDH-----------------PNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIA 116 (267)
T ss_pred HHHHHHHhCCC-----------------CCcceEEEEEecCCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 45555544422 11123333333 4567899999999999887653333345555555444443
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|+.|++|+|+||.||+++.+ ++++|+|||++..+..
T Consensus 117 ~~l~~lH~~~i~h~dlkp~nili~~~--~~~~l~dfg~~~~~~~ 158 (267)
T cd05066 117 SGMKYLSDMGYVHRDLAARNILVNSN--LVCKVSDFGLSRVLED 158 (267)
T ss_pred HHHHHHHHCCEeehhhchhcEEECCC--CeEEeCCCCccccccc
Confidence 678899999999999999999865 8999999999887653
No 174
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.27 E-value=1.7e-11 Score=131.50 Aligned_cols=136 Identities=16% Similarity=0.163 Sum_probs=90.2
Q ss_pred ccccccceeeEEEEec---CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 12 PLATASIAQVHRATLV---DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 12 plasaSigqV~~A~l~---~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
.||+|++|.||+|+.. ++..||+|..+...... .+.++.+|
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~------------------------------------~~~~~~~E 45 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQ------------------------------------EQMKFLEE 45 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChH------------------------------------HHHHHHHH
Confidence 5899999999999864 35679999765432110 11235556
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhc----CCCHHHHHHH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAF----GVNKQKVVEE 160 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~----~~~~~~l~~~ 160 (864)
...+.++.+ +. |.+++. ....++||||++|.+|.++...... ..+...+...
T Consensus 46 ~~~l~~l~h------------------~~--iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~ 105 (269)
T cd05087 46 AQPYRSLQH------------------SN--LLQCLGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRM 105 (269)
T ss_pred HHHHHhCCC------------------CC--EeeEEEEEcCCCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHH
Confidence 665555432 22 233332 4567899999999999887542211 1222222233
Q ss_pred HHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 161 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 161 ~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||++...
T Consensus 106 ~~qi~~al~~lH~~~i~H~dlkp~nil~~~~--~~~kL~dfg~~~~~ 150 (269)
T cd05087 106 ACEIALGLLHLHKNNFIHSDLALRNCLLTAD--LTVKIGDYGLSHNK 150 (269)
T ss_pred HHHHHHHHHHHHHCCEeccccCcceEEEcCC--CcEEECCccccccc
Confidence 33322 678899999999999999999865 89999999988643
No 175
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.27 E-value=2.6e-11 Score=133.81 Aligned_cols=143 Identities=17% Similarity=0.143 Sum_probs=94.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|+||+|+.. +|+.||||+....-.... + ...++..|+
T Consensus 31 ~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~----------------------------~------~~~~~~~e~ 76 (317)
T cd06635 31 REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSN----------------------------E------KWQDIIKEV 76 (317)
T ss_pred heeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCch----------------------------H------HHHHHHHHH
Confidence 67999999999999975 789999998653211100 0 001244455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
+.+.++.+. ..+.+...+. ....+|||||+.| ++.+.........+...+...+.+++ +
T Consensus 77 ~~l~~l~h~-----------------~iv~~~~~~~~~~~~~lv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l 138 (317)
T cd06635 77 KFLQRIKHP-----------------NSIEYKGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGL 138 (317)
T ss_pred HHHHhCCCC-----------------CEEEEEEEEeeCCeEEEEEeCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence 555554321 1122222222 5667899999987 55555433333455555555444443 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+|..|++|+|++|+||+++.+ +.++|+|||++.....
T Consensus 139 ~~lH~~~i~H~dL~p~Nil~~~~--~~~kl~dfg~~~~~~~ 177 (317)
T cd06635 139 AYLHSHNMIHRDIKAGNILLTEP--GQVKLADFGSASIASP 177 (317)
T ss_pred HHHHHCCcccCCCCcccEEECCC--CCEEEecCCCccccCC
Confidence 78899999999999999999865 8999999998876543
No 176
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.27 E-value=2.2e-11 Score=129.58 Aligned_cols=142 Identities=20% Similarity=0.192 Sum_probs=95.5
Q ss_pred cccccccceeeEEEEecC--CC--EEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHH
Q 002927 11 TPLATASIAQVHRATLVD--GR--QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 86 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~--G~--~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 86 (864)
+.||+|++|.||+|...+ |+ .||||+.+++...... -+|.
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~------------------------------------~~~~ 44 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIM------------------------------------DDFL 44 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHH------------------------------------HHHH
Confidence 468999999999999752 33 6999987765442100 1133
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHHH
Q 002927 87 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY 165 (864)
Q Consensus 87 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~~ 165 (864)
+|.+.+.++++. .-+.+.........+++|||++|.+|.+...... ...+...+...+.++.
T Consensus 45 ~e~~~l~~l~h~-----------------~iv~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~ 107 (257)
T cd05040 45 KEAAIMHSLDHE-----------------NLIRLYGVVLTHPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIA 107 (257)
T ss_pred HHHHHHhhcCCC-----------------CccceeEEEcCCeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHH
Confidence 455555554321 0122222222356789999999999988754322 2345555555444443
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 108 ~~L~~lH~~~i~H~di~p~nil~~~~--~~~kl~dfg~~~~~~~ 149 (257)
T cd05040 108 NGMRYLESKRFIHRDLAARNILLASD--DKVKIGDFGLMRALPQ 149 (257)
T ss_pred HHHHHHHhCCccccccCcccEEEecC--CEEEeccccccccccc
Confidence 778899999999999999999865 8999999999887654
No 177
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.27 E-value=1.9e-11 Score=130.36 Aligned_cols=137 Identities=17% Similarity=0.189 Sum_probs=95.9
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.|++|++|.||+|+..+++.||||+.+++.... -++.+|..
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~--------------------------------------~~~~~e~~ 53 (261)
T cd05034 12 RKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSP--------------------------------------EAFLQEAQ 53 (261)
T ss_pred eeeccCcceEEEEEEEcCCceEEEEEecCCccCH--------------------------------------HHHHHHHH
Confidence 6799999999999998888899999876532110 01334555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY 165 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~~ 165 (864)
.+.++.+ ..+++++. ....+++|||++|.+|.++..... .......+...+.+++
T Consensus 54 ~l~~l~h--------------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~ 113 (261)
T cd05034 54 IMKKLRH--------------------DKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIA 113 (261)
T ss_pred HHhhCCC--------------------CCEeeeeeeeecCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHH
Confidence 5544422 12334432 356889999999999987754221 1234444444443333
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|+||.||+++++ +.++|+|||++..+..
T Consensus 114 ~al~~lh~~~i~h~di~p~nili~~~--~~~~l~d~g~~~~~~~ 155 (261)
T cd05034 114 EGMAYLESRNYIHRDLAARNILVGEN--LVCKIADFGLARLIED 155 (261)
T ss_pred HHHHHHHhCCcccCCcchheEEEcCC--CCEEECccccceeccc
Confidence 678899999999999999999865 8999999999887653
No 178
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.27 E-value=1.3e-11 Score=135.02 Aligned_cols=140 Identities=17% Similarity=0.157 Sum_probs=91.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|.||+|+.+ +++.||+|..+....... ...+.+|.
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------~~~~~~E~ 55 (301)
T cd07873 12 DKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGA------------------------------------PCTAIREV 55 (301)
T ss_pred eEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCc------------------------------------hhHHHHHH
Confidence 67999999999999976 789999998654321110 00122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
..+.++.+. .-+.+-..+. ....+|||||++| +|.+.........+...+...+.+++ +
T Consensus 56 ~~l~~l~h~-----------------nI~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL 117 (301)
T cd07873 56 SLLKDLKHA-----------------NIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNSINMHNVKLFLFQLLRGL 117 (301)
T ss_pred HHHHhcCCC-----------------CcceEEEEEecCCeEEEEEecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 444444321 0122222222 4567899999986 55554332223345555555444443 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..+|..|++|+|+||+||+++.+ +.++|+|||++....
T Consensus 118 ~~lH~~~i~H~dlkp~Nil~~~~--~~~kl~dfg~~~~~~ 155 (301)
T cd07873 118 NYCHRRKVLHRDLKPQNLLINER--GELKLADFGLARAKS 155 (301)
T ss_pred HHHHhCCeeCCCCCHHHEEECCC--CcEEECcCcchhccC
Confidence 88999999999999999999865 899999999986543
No 179
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.27 E-value=1e-11 Score=134.70 Aligned_cols=77 Identities=22% Similarity=0.306 Sum_probs=56.8
Q ss_pred CCceEEEeecCCcCCCChHHHh-hcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 127 SETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 127 ~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
...+|+|||++| +|.++.... ..+.+...+...+.+++ +..+|..|++|+|+||.|||++.+ +.++|+|||++.
T Consensus 82 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~--~~~kl~Dfg~~~ 158 (290)
T cd07862 82 TKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSS--GQIKLADFGLAR 158 (290)
T ss_pred CcEEEEEccCCC-CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCC--CCEEEccccceE
Confidence 446899999986 565554321 22345555555444444 788999999999999999999865 899999999987
Q ss_pred ccC
Q 002927 204 KLS 206 (864)
Q Consensus 204 ~l~ 206 (864)
...
T Consensus 159 ~~~ 161 (290)
T cd07862 159 IYS 161 (290)
T ss_pred ecc
Confidence 654
No 180
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.26 E-value=2.7e-11 Score=131.68 Aligned_cols=144 Identities=17% Similarity=0.147 Sum_probs=97.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|.||+|+.. +++.||||+.++..... .+ ..-.+.+|+
T Consensus 7 ~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~----~~------------------------------~~~~~~~e~ 52 (290)
T cd05580 7 KTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVK----LK------------------------------QVEHVLNEK 52 (290)
T ss_pred EEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhh----hh------------------------------HHHHHHHHH
Confidence 67999999999999976 79999999875321100 00 001134566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
+.+.++.+. .-+.+...+. ....+++|||++|.+|.+..... ..+....+...+.+++ +
T Consensus 53 ~~l~~l~h~-----------------~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qil~~l 114 (290)
T cd05580 53 RILQSIRHP-----------------FLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKS-GRFPEPVARFYAAQVVLAL 114 (290)
T ss_pred HHHHhCCCC-----------------CccceeeEEEcCCeEEEEEecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHH
Confidence 555554321 0122222333 45678999999999998775422 3345555544444433 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
..+|..|++|+|+||.||+++.+ +.++|+|||++..+...
T Consensus 115 ~~lH~~~i~H~dl~p~nili~~~--~~~kl~dfg~~~~~~~~ 154 (290)
T cd05580 115 EYLHSLDIVYRDLKPENLLLDSD--GYIKITDFGFAKRVKGR 154 (290)
T ss_pred HHHHHCCEecCCCCHHHEEECCC--CCEEEeeCCCccccCCC
Confidence 78899999999999999999865 89999999998876543
No 181
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.26 E-value=3.4e-11 Score=128.50 Aligned_cols=137 Identities=19% Similarity=0.218 Sum_probs=95.7
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||+|++|.||+|...+++.||||...+.-... -.+.+|+.
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~~--------------------------------------~~~~~e~~ 53 (261)
T cd05072 12 KKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSV--------------------------------------QAFLEEAN 53 (261)
T ss_pred eecCCcCCceEEEEEecCCceEEEEEccCCchhH--------------------------------------HHHHHHHH
Confidence 6799999999999998888899999866532110 01334555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY 165 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~~ 165 (864)
.+.++.+ +. +.+++ . ....+|+|||++|.+|.++..... .......+...+.+++
T Consensus 54 ~l~~l~h------------------~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~ 113 (261)
T cd05072 54 LMKTLQH------------------DK--LVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIA 113 (261)
T ss_pred HHHhCCC------------------CC--eeeEEEEEcCCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 5554422 12 22232 2 456789999999999988754322 2234444444444443
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|++|.||+++.+ +.++|.|||++..+..
T Consensus 114 ~~l~~LH~~~i~H~dl~p~nili~~~--~~~~l~dfg~~~~~~~ 155 (261)
T cd05072 114 EGMAYIERKNYIHRDLRAANVLVSES--LMCKIADFGLARVIED 155 (261)
T ss_pred HHHHHHHHCCeeccccchhhEEecCC--CcEEECCCccceecCC
Confidence 788999999999999999999865 8999999999987654
No 182
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.26 E-value=3.6e-11 Score=129.84 Aligned_cols=142 Identities=20% Similarity=0.171 Sum_probs=99.1
Q ss_pred cccccccceeeEEEEec-CCC----EEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 11 TPLATASIAQVHRATLV-DGR----QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~----~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
+.||+|++|+||+|+.+ +|+ .||+|+........ ....+
T Consensus 13 ~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~------------------------------------~~~~~ 56 (279)
T cd05057 13 KVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPK------------------------------------ANKEI 56 (279)
T ss_pred ceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHH------------------------------------HHHHH
Confidence 68999999999999975 454 58999765443210 01124
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
.+|+..+.++.+. .-+.+.....+...+++|||++|.+|.+.........+...+...+.++.
T Consensus 57 ~~e~~~l~~l~h~-----------------~i~~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~ 119 (279)
T cd05057 57 LDEAYVMASVDHP-----------------HVVRLLGICLSSQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIA 119 (279)
T ss_pred HHHHHHHHhCCCC-----------------CcceEEEEEecCceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHH
Confidence 4566666655321 01222222225678899999999999887554333456666666555554
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 120 ~~l~~LH~~~i~H~di~p~nil~~~~--~~~kL~dfg~~~~~~~ 161 (279)
T cd05057 120 KGMSYLEEKRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLDV 161 (279)
T ss_pred HHHHHHHhCCEEecccCcceEEEcCC--CeEEECCCcccccccC
Confidence 788999999999999999999865 8899999999887653
No 183
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.26 E-value=2.9e-11 Score=128.16 Aligned_cols=140 Identities=19% Similarity=0.227 Sum_probs=97.9
Q ss_pred cccccccceeeEEEEec-CC----CEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 11 TPLATASIAQVHRATLV-DG----RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G----~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
+.||.|++|+||+|+.. ++ +.||+|+.++...... +-++
T Consensus 5 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------~~~~ 48 (258)
T smart00219 5 KKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQ------------------------------------IEEF 48 (258)
T ss_pred ceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHH------------------------------------HHHH
Confidence 67999999999999975 33 8999999876543210 0113
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcC-CCHHHHHHH
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFG-VNKQKVVEE 160 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~-~~~~~l~~~ 160 (864)
..|.+.+.++.+ + .|.+++. ....+++|||++|.+|.++....... .....+...
T Consensus 49 ~~e~~~l~~l~~------------------~--~i~~~~~~~~~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ 108 (258)
T smart00219 49 LREARIMRKLDH------------------P--NIVKLLGVCTEEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSF 108 (258)
T ss_pred HHHHHHHHhcCC------------------C--chheEEEEEcCCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHH
Confidence 344444444421 1 1223332 46688999999999998876433322 566555555
Q ss_pred HHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 161 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 161 ~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+.+++ +..+|..|++|+|++|+||+++.+ +.++|+|||++......
T Consensus 109 ~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~--~~~~l~dfg~~~~~~~~ 156 (258)
T smart00219 109 ALQIARGMEYLESKNFIHRDLAARNCLVGEN--LVVKISDFGLSRDLYDD 156 (258)
T ss_pred HHHHHHHHHHHhcCCeeecccccceEEEccC--CeEEEcccCCceecccc
Confidence 55444 778899999999999999999865 79999999998776543
No 184
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.26 E-value=3.4e-11 Score=128.38 Aligned_cols=144 Identities=15% Similarity=0.117 Sum_probs=94.4
Q ss_pred ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 10 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
.+.|++|++|+||+|... +|++||||+.+........ . . +-.++.+|
T Consensus 7 ~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~--~-----------------------~-------~~~~~~~e 54 (263)
T cd06625 7 GKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPET--K-----------------------K-------EVNALECE 54 (263)
T ss_pred cceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhh--H-----------------------H-------HHHHHHHH
Confidence 478999999999999975 7999999987643211100 0 0 00124456
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCE-EEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH-
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v-~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~- 165 (864)
++.+.++.+ +.+ .+...+. ....+++|||++|.+|.+..... ...........+.+++
T Consensus 55 ~~~l~~l~~------------------~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~l~~ 115 (263)
T cd06625 55 IQLLKNLQH------------------ERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAY-GALTETVTRKYTRQILE 115 (263)
T ss_pred HHHHHhCCC------------------CCeeeeEEEEccCCeEEEEEEECCCCcHHHHHHHh-CCCCHHHHHHHHHHHHH
Confidence 655555422 222 2222222 45678999999999998775422 2233333333333322
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|+|+||+||+++.+ ++++|+|||++..+.
T Consensus 116 ~l~~lH~~~i~H~dl~p~nilv~~~--~~~~l~dfg~~~~~~ 155 (263)
T cd06625 116 GVEYLHSNMIVHRDIKGANILRDSA--GNVKLGDFGASKRLQ 155 (263)
T ss_pred HHHHHHhCCeecCCCCHHHEEEcCC--CCEEEeecccceecc
Confidence 678899999999999999999854 899999999987654
No 185
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.25 E-value=1.4e-11 Score=129.13 Aligned_cols=139 Identities=16% Similarity=0.271 Sum_probs=103.8
Q ss_pred cccccccceeeEEEEe-cCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+-||+||||..+.|+. -++++||||.--- +.+... ++.|-
T Consensus 34 kKIGeGsFG~lf~G~Nl~nne~VAIKfEPr-------------------------kS~APQ--------------LrdEY 74 (449)
T KOG1165|consen 34 KKIGEGSFGVLFLGKNLYNNEPVAIKFEPR-------------------------KSEAPQ--------------LRDEY 74 (449)
T ss_pred cccccCcceeeecccccccCceEEEEeccc-------------------------cCCcch--------------HHHHH
Confidence 5699999999999994 4899999995210 011111 22244
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---cC-CceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SS-ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~-~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+..+.+.. ..-||.||+ |+ ..+||||.+ |.+|+|+..+....+..+.++...++++
T Consensus 75 r~YKlL~g-------------------~~GIP~vYYFGqeG~~NiLVidLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi 134 (449)
T KOG1165|consen 75 RTYKLLGG-------------------TEGIPQVYYFGQEGKYNILVIDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMI 134 (449)
T ss_pred HHHHHHcC-------------------CCCCCceeeeccccchhhhhhhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHH
Confidence 33333322 356899987 44 478999988 9999999888877788888888777777
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCC---CceEEEecccccccChH
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPP---HRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~---g~i~LiDFG~~~~l~~~ 208 (864)
++.+|++.+|.||+||.|+||.+-+. ..|.+|||||++..-+.
T Consensus 135 ~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp 182 (449)
T KOG1165|consen 135 TRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDP 182 (449)
T ss_pred HHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCc
Confidence 88899999999999999999975321 35889999999976443
No 186
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.25 E-value=3.3e-11 Score=130.81 Aligned_cols=141 Identities=19% Similarity=0.273 Sum_probs=99.3
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+-||.|.-++||+|+.. .++.||||+..- +....|+.. +++|.
T Consensus 32 e~IG~G~sa~V~~A~c~p~~e~VAIK~inL---Ekc~~~ld~---------------------------------l~kE~ 75 (516)
T KOG0582|consen 32 EVIGVGASAVVYLARCIPTNEVVAIKIINL---EKCNNDLDA---------------------------------LRKEV 75 (516)
T ss_pred EEEeccceeEeeeeeecccCCEEEEEEeeh---hhhhhhHHH---------------------------------HHHHH
Confidence 45899988999999954 789999997531 111112211 34466
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEE-EeeEE-ecCCceEEEeecCCcCCCChHHH-hhcCCCHHHHHHHHHHHH-
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVL-IPEVI-QSSETVLILEFMDGIRLNDCESL-EAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~-vP~v~-~~~~~vLvmE~i~G~~L~~~~~~-~~~~~~~~~l~~~~~~~~- 165 (864)
.++..+.| |+|. .-..+ .....++||-|+.|+++.++... -..|++...++..+-+.+
T Consensus 76 ~~msl~~H------------------PNIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~Lk 137 (516)
T KOG0582|consen 76 QTMSLIDH------------------PNIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLK 137 (516)
T ss_pred HHhhhcCC------------------CCcceEEEEEEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHH
Confidence 66665533 2221 11111 15678899999999999998653 234666666666555555
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+.++|.+|.||||+|+|||||+.+ |.|+|.|||.+..+-+
T Consensus 138 aL~YLH~~G~IHRdvKAgnILi~~d--G~VkLadFgvsa~l~~ 178 (516)
T KOG0582|consen 138 ALDYLHQNGHIHRDVKAGNILIDSD--GTVKLADFGVSASLFD 178 (516)
T ss_pred HHHHHHhcCceecccccccEEEcCC--CcEEEcCceeeeeecc
Confidence 888999999999999999999976 9999999998776644
No 187
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.25 E-value=3.8e-11 Score=126.34 Aligned_cols=140 Identities=19% Similarity=0.248 Sum_probs=100.7
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
++|++|++|+||+++.. +|+.|++|+.+....+.. -++.+|.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~-------------------------------------~~~~~e~ 48 (253)
T cd05122 6 EKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKK-------------------------------------EKIINEI 48 (253)
T ss_pred eeeccCCceEEEEEEECCCCcEEEEEEecccchhHH-------------------------------------HHHHHHH
Confidence 68999999999999986 799999999876443110 0133344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+.++.+ + .+++++ . ....+++|||++|.+|.++........+...+...+.+++
T Consensus 49 ~~l~~l~~------------------~--~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~ 108 (253)
T cd05122 49 QILKKCKH------------------P--NIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELL 108 (253)
T ss_pred HHHHhCCC------------------C--CEeEEEEEEecCCeEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHH
Confidence 44444321 1 233333 2 4668899999999999887543323456666666555554
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHH
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 209 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 209 (864)
+..+|..|++|+|++|.||+++.+ +.++|+|||.+..+....
T Consensus 109 ~~l~~lh~~~i~h~dl~p~ni~i~~~--~~~~l~d~~~~~~~~~~~ 152 (253)
T cd05122 109 KGLEYLHSNGIIHRDIKAANILLTSD--GEVKLIDFGLSAQLSDTK 152 (253)
T ss_pred HHHHHhhcCCEecCCCCHHHEEEccC--CeEEEeeccccccccccc
Confidence 788999999999999999999865 899999999988776543
No 188
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.25 E-value=2.9e-11 Score=132.49 Aligned_cols=77 Identities=18% Similarity=0.200 Sum_probs=58.5
Q ss_pred cCCceEEEeecCCcCCCChHHHhh---------------cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEcc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEA---------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSK 188 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~---------------~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~ 188 (864)
....+++|||++|.+|.++..... ..++...+...+.++. +..+|+.|++|+|++|.|||++.
T Consensus 80 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~ 159 (303)
T cd05088 80 RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE 159 (303)
T ss_pred CCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecC
Confidence 456899999999999988754221 1234444555444443 78889999999999999999986
Q ss_pred CCCCceEEEecccccc
Q 002927 189 DPPHRPILLDFGLTKK 204 (864)
Q Consensus 189 ~~~g~i~LiDFG~~~~ 204 (864)
+ +.++|+|||++..
T Consensus 160 ~--~~~kl~dfg~~~~ 173 (303)
T cd05088 160 N--YVAKIADFGLSRG 173 (303)
T ss_pred C--CcEEeCccccCcc
Confidence 5 8999999998753
No 189
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.25 E-value=3.4e-11 Score=135.06 Aligned_cols=138 Identities=18% Similarity=0.246 Sum_probs=87.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.. +|+.||||+.......... . .++.+|.
T Consensus 23 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~-----------------------------~------~~~~~E~ 67 (355)
T cd07874 23 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTH-----------------------------A------KRAYREL 67 (355)
T ss_pred EEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHH-----------------------------H------HHHHHHH
Confidence 78999999999999975 7999999986543211100 0 0122233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-------cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 162 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~ 162 (864)
..+..+.+.. -+.+..++. ....++||||++|. +.+.. ....+...+...+.
T Consensus 68 ~~l~~l~h~n-----------------iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~---~~~l~~~~~~~~~~ 126 (355)
T cd07874 68 VLMKCVNHKN-----------------IISLLNVFTPQKSLEEFQDVYLVMELMDAN-LCQVI---QMELDHERMSYLLY 126 (355)
T ss_pred HHHHHhCCCc-----------------hhceeeeeeccccccccceeEEEhhhhccc-HHHHH---hhcCCHHHHHHHHH
Confidence 3333332210 111122221 13458999999874 33222 12344444444444
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+++ +..+|+.|++|||+||+||+++.+ +.++|+|||+++...
T Consensus 127 qi~~aL~~LH~~givHrDikp~Nill~~~--~~~kl~Dfg~~~~~~ 170 (355)
T cd07874 127 QMLCGIKHLHSAGIIHRDLKPSNIVVKSD--CTLKILDFGLARTAG 170 (355)
T ss_pred HHHHHHHHHHhCCcccCCCChHHEEECCC--CCEEEeeCcccccCC
Confidence 433 788999999999999999999865 899999999987654
No 190
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.25 E-value=3.8e-11 Score=128.00 Aligned_cols=77 Identities=19% Similarity=0.294 Sum_probs=58.8
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
....+++|||++|.+|.++.... ...+...+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++.
T Consensus 69 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~--~~~~l~dfg~~~ 145 (260)
T cd05611 69 KDYLYLVMEYLNGGDCASLIKTL-GGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQT--GHLKLTDFGLSR 145 (260)
T ss_pred CCeEEEEEeccCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCC--CcEEEeecccce
Confidence 45678999999999998875422 2344444444444433 678999999999999999999865 899999999876
Q ss_pred cc
Q 002927 204 KL 205 (864)
Q Consensus 204 ~l 205 (864)
..
T Consensus 146 ~~ 147 (260)
T cd05611 146 NG 147 (260)
T ss_pred ec
Confidence 54
No 191
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.25 E-value=3.2e-11 Score=128.18 Aligned_cols=136 Identities=18% Similarity=0.165 Sum_probs=92.0
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||.|++|+||++.. +|+.||||+.+..... . .+.+|..
T Consensus 12 ~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~~~---------------------------------~------~~~~e~~ 51 (254)
T cd05083 12 EIIGEGEFGAVLQGEY-TGQKVAVKNIKCDVTA---------------------------------Q------AFLEETA 51 (254)
T ss_pred eeeccCCCCceEeccc-CCCceEEEeecCcchH---------------------------------H------HHHHHHH
Confidence 6799999999999974 7899999986532210 0 1334544
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHHH--HH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--AH 167 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~~--l~ 167 (864)
.+.++.+. .-+.+.........+++|||++|.+|.++..... ...+...+...+.+++ +.
T Consensus 52 ~l~~~~~~-----------------~i~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~ 114 (254)
T cd05083 52 VMTKLHHK-----------------NLVRLLGVILHNGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGME 114 (254)
T ss_pred HHHhCCCC-----------------CcCeEEEEEcCCCcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHH
Confidence 44443221 1122222223456789999999999988754322 1234444444333333 67
Q ss_pred HHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 168 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 168 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
.+|..|++|+|+||+||+++.+ +.++|+|||++...
T Consensus 115 ~lH~~~~~H~dl~p~nili~~~--~~~kl~Dfg~~~~~ 150 (254)
T cd05083 115 YLESKKLVHRDLAARNILVSED--GVAKVSDFGLARVG 150 (254)
T ss_pred HHHhCCeeccccCcceEEEcCC--CcEEECCCccceec
Confidence 8899999999999999999865 89999999988754
No 192
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.25 E-value=2.2e-11 Score=140.84 Aligned_cols=133 Identities=20% Similarity=0.118 Sum_probs=91.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|+.|++|.||+|+.. +++.||||..... .+.+|+
T Consensus 175 ~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~~-------------------------------------------~~~~E~ 211 (461)
T PHA03211 175 RALTPGSEGCVFESSHPDYPQRVVVKAGWYA-------------------------------------------SSVHEA 211 (461)
T ss_pred EEEccCCCeEEEEEEECCCCCEEEEeccccc-------------------------------------------CHHHHH
Confidence 57999999999999976 6899999942110 123466
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
+.+.++.+. .-+.+-.+.. ....+|+||++.| .|.+........++...+...+.++. +
T Consensus 212 ~iL~~L~Hp-----------------nIv~l~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~l~~~~~~~i~~qi~~aL 273 (461)
T PHA03211 212 RLLRRLSHP-----------------AVLALLDVRVVGGLTCLVLPKYRS-DLYTYLGARLRPLGLAQVTAVARQLLSAI 273 (461)
T ss_pred HHHHHCCCC-----------------CCCcEEEEEEECCEEEEEEEccCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 655555331 0122222222 4567899999975 44444322223456666665555554 8
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..+|..||+|||+||+|||++.+ +.++|+|||+++.+.
T Consensus 274 ~yLH~~gIvHrDLKP~NILl~~~--~~vkL~DFGla~~~~ 311 (461)
T PHA03211 274 DYIHGEGIIHRDIKTENVLVNGP--EDICLGDFGAACFAR 311 (461)
T ss_pred HHHHHCCEEECcCCHHHEEECCC--CCEEEcccCCceecc
Confidence 88999999999999999999865 889999999987654
No 193
>PRK10345 hypothetical protein; Provisional
Probab=99.24 E-value=6.6e-11 Score=122.10 Aligned_cols=139 Identities=14% Similarity=0.123 Sum_probs=87.7
Q ss_pred ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 10 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
.++||+|++|.||. .+ ++.. +||+.+++-... .+ ++.+|
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~-------------------------------~~------~~~rE 46 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGG-------------------------------DK------EIRRE 46 (210)
T ss_pred cceecCCCceEEEE--CCCCcCe-EEEEEeccccch-------------------------------HH------HHHHH
Confidence 47999999999996 43 5555 699987642110 00 13445
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---cCC---c-e-EEEee--cCCcCCCChHHHhhcCCCHH-HH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSE---T-V-LILEF--MDGIRLNDCESLEAFGVNKQ-KV 157 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~---~-v-LvmE~--i~G~~L~~~~~~~~~~~~~~-~l 157 (864)
.+.+..+.+. ......|+++|. ++. . + +|||| ++|.+|.++... ...+.. ..
T Consensus 47 i~~l~~L~~~---------------~~~h~nIvr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~--~~~~e~~~~ 109 (210)
T PRK10345 47 LKYYAHLSRR---------------LIDWSGIPRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQ--CRYEEDVAQ 109 (210)
T ss_pred HHHHHHhhcc---------------CCCCcccceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHHHc--ccccHhHHH
Confidence 5555555331 112344677764 221 2 2 78999 557899888642 223322 23
Q ss_pred HHHHHHHHHHHHHhcCeeccCCCCCCeEEccC--CCCceEEEeccccccc
Q 002927 158 VEEITRAYAHQIYVDGFFNGDPHPGNFLVSKD--PPHRPILLDFGLTKKL 205 (864)
Q Consensus 158 ~~~~~~~~l~~i~~~G~~H~D~hPgNIlv~~~--~~g~i~LiDFG~~~~l 205 (864)
...++..+++.+|++||+|||+||+|||++.. ++++++|+||+-...+
T Consensus 110 ~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~~~ 159 (210)
T PRK10345 110 LRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGESTF 159 (210)
T ss_pred HHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCCcce
Confidence 45555566789999999999999999999753 2347999994434443
No 194
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.24 E-value=2.3e-11 Score=129.92 Aligned_cols=143 Identities=17% Similarity=0.173 Sum_probs=95.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|.||+|..+ +++.||+|+.......... -++.+|.
T Consensus 7 ~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~------------------------------------~~~~~e~ 50 (265)
T cd06605 7 GELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQ------------------------------------KQILREL 50 (265)
T ss_pred HHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHH------------------------------------HHHHHHH
Confidence 67999999999999987 7999999987654322111 1122343
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
..+.++.+. .-+.+...+. ....+|+|||++|.+|.++............+...+.+++ +
T Consensus 51 ~~l~~~~~~-----------------~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l 113 (265)
T cd06605 51 DILHKCNSP-----------------YIVGFYGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGL 113 (265)
T ss_pred HHHHHCCCC-----------------chhhhheeeecCCEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHH
Confidence 333333210 0011111122 4567899999999999887653323445555444444443 6
Q ss_pred HHHHh-cCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 167 HQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 167 ~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
..+|. .|++|+|+||+||+++.+ +.++|+|||.+..+...
T Consensus 114 ~~lH~~~~i~H~dl~~~ni~~~~~--~~~~l~d~g~~~~~~~~ 154 (265)
T cd06605 114 TYLHEKHKIIHRDVKPSNILVNSR--GQIKLCDFGVSGQLVNS 154 (265)
T ss_pred HHHcCCCCeecCCCCHHHEEECCC--CCEEEeecccchhhHHH
Confidence 78899 999999999999999965 89999999998766543
No 195
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.24 E-value=3.1e-11 Score=131.57 Aligned_cols=138 Identities=20% Similarity=0.219 Sum_probs=93.4
Q ss_pred cccccccceeeEEEEecC-------------C--CEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHH
Q 002927 11 TPLATASIAQVHRATLVD-------------G--RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEW 75 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~-------------G--~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~ 75 (864)
+.||+|++|.||+++... + ..||||+.+++.......
T Consensus 11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~---------------------------- 62 (295)
T cd05097 11 EKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARN---------------------------- 62 (295)
T ss_pred hccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHH----------------------------
Confidence 569999999999998642 2 248999988764322111
Q ss_pred HHHhHhhccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhh--
Q 002927 76 CKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEA-- 149 (864)
Q Consensus 76 ~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~-- 149 (864)
+|.+|.+.+.++++ ..+.+++ . ....++||||++|.+|.++.....
T Consensus 63 --------~~~~ei~~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~ 114 (295)
T cd05097 63 --------DFLKEIKIMSRLKN--------------------PNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIE 114 (295)
T ss_pred --------HHHHHHHHHHhCCC--------------------CCcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhcccc
Confidence 14456665555432 1223333 2 566789999999999988753221
Q ss_pred ---------cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 150 ---------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 150 ---------~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.......+...+.+++ +..+|..|++|+|+||+||+++.+ +.++|+|||++..+.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~~--~~~kl~dfg~~~~~~ 180 (295)
T cd05097 115 STFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNH--YTIKIADFGMSRNLY 180 (295)
T ss_pred ccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEcCC--CcEEecccccccccc
Confidence 0123334444444443 678899999999999999999865 789999999987653
No 196
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.24 E-value=4e-11 Score=128.59 Aligned_cols=142 Identities=21% Similarity=0.225 Sum_probs=95.7
Q ss_pred ccccccccceeeEEEEec-CCC---EEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 10 ETPLATASIAQVHRATLV-DGR---QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-~G~---~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
.+-||.|++|.||+|+++ +|+ .||||+.......... -+|
T Consensus 9 ~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~------------------------------------~~~ 52 (269)
T cd05065 9 EEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQR------------------------------------RDF 52 (269)
T ss_pred EeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHH------------------------------------HHH
Confidence 366999999999999976 443 6999987654321110 013
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHH
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 164 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~ 164 (864)
..|+..+.++.+. .-+.+...+. ....++||||++|.+|.++........+...+...+.++
T Consensus 53 ~~e~~~l~~l~h~-----------------ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l 115 (269)
T cd05065 53 LSEASIMGQFDHP-----------------NIIHLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGI 115 (269)
T ss_pred HHHHHHHHhCCCc-----------------CcceEEEEECCCCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHH
Confidence 4455555444221 0122222222 456789999999999988765433345555555544444
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+ +..+|+.|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 116 ~~al~~lH~~g~~H~dl~p~nili~~~--~~~kl~dfg~~~~~~ 157 (269)
T cd05065 116 AAGMKYLSEMNYVHRDLAARNILVNSN--LVCKVSDFGLSRFLE 157 (269)
T ss_pred HHHHHHHHHCCEeecccChheEEEcCC--CcEEECCCccccccc
Confidence 3 778899999999999999999854 899999999887654
No 197
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.24 E-value=2.8e-11 Score=141.92 Aligned_cols=125 Identities=14% Similarity=0.136 Sum_probs=84.4
Q ss_pred ceEEEeecCCcCCCChHHH-hhcCCCHHHHHHHHHHHH--HHHHHhcC--eeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 129 TVLILEFMDGIRLNDCESL-EAFGVNKQKVVEEITRAY--AHQIYVDG--FFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 129 ~vLvmE~i~G~~L~~~~~~-~~~~~~~~~l~~~~~~~~--l~~i~~~G--~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
..|.||||.|+.|-|++.. ...++...++++++.+.+ +..||... +||||||=+|||+..+ |..+|||||.+.
T Consensus 117 vllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~--g~~KLCDFGSat 194 (738)
T KOG1989|consen 117 VLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSAD--GNYKLCDFGSAT 194 (738)
T ss_pred EEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCC--CCEEeCcccccc
Confidence 3589999999999888652 234577888888887776 77889888 9999999999999965 899999999886
Q ss_pred ccChH-----HHHHHHHHHHHH--HhCCHHHHHHHHHHcCCCcCCCcHHHHHHHHHHHH
Q 002927 204 KLSSS-----MKQALAKMFFAA--AEGDHVALLSAFAEMGLRLRLDVPEQAMEVSTLFF 255 (864)
Q Consensus 204 ~l~~~-----~r~~~~~l~~a~--~~~d~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~ 255 (864)
..... .+..+-+=+... ..-...++++.+..+++..+.|.=+.-.-+..+.|
T Consensus 195 t~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy 253 (738)
T KOG1989|consen 195 TKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCY 253 (738)
T ss_pred cccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHH
Confidence 44322 222222222111 12334668888888888654444333333334433
No 198
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.24 E-value=4.1e-11 Score=127.57 Aligned_cols=137 Identities=21% Similarity=0.216 Sum_probs=93.2
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||+|++|.||+|.. .|+.||+|..+..... -+|.+|+.
T Consensus 12 ~~lg~g~~~~v~~~~~-~~~~~~~k~~~~~~~~---------------------------------------~~~~~e~~ 51 (256)
T cd05082 12 QTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA---------------------------------------QAFLAEAS 51 (256)
T ss_pred eeecccCCCeEEEEEE-cCCcEEEEEeCCCchH---------------------------------------HHHHHHHH
Confidence 6799999999999986 5889999986532110 01344555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--cCCceEEEeecCCcCCCChHHHhhc-CCCHHHHHHHHHHHH--
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAF-GVNKQKVVEEITRAY-- 165 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLvmE~i~G~~L~~~~~~~~~-~~~~~~l~~~~~~~~-- 165 (864)
.+.++.+. .-+.+...+. ....+++|||++|.+|.++...... ..+...+...+.+++
T Consensus 52 ~l~~l~~~-----------------~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~ 114 (256)
T cd05082 52 VMTQLRHS-----------------NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 114 (256)
T ss_pred HHHhCCCC-----------------CeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Confidence 55554321 1122222222 3457899999999999887543222 134455555444443
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|+|++|+||+++.+ ++++|+|||++....
T Consensus 115 l~~lH~~~i~H~dlkp~nil~~~~--~~~kl~dfg~~~~~~ 153 (256)
T cd05082 115 MEYLEANNFVHRDLAARNVLVSED--NVAKVSDFGLTKEAS 153 (256)
T ss_pred HHHHHhCCEeccccchheEEEcCC--CcEEecCCccceecc
Confidence 788999999999999999999865 899999999887653
No 199
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.24 E-value=3.2e-11 Score=136.48 Aligned_cols=50 Identities=14% Similarity=0.251 Sum_probs=39.7
Q ss_pred HHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 155 QKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 155 ~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..+...+.++. +..+|..|++|||+||.|||++.+ +.++|+|||++..+.
T Consensus 212 ~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~--~~~kL~DfGla~~~~ 263 (374)
T cd05106 212 DDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDG--RVAKICDFGLARDIM 263 (374)
T ss_pred HHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCC--CeEEEeeceeeeecc
Confidence 34444444443 788999999999999999999865 889999999987654
No 200
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.24 E-value=4.7e-11 Score=127.46 Aligned_cols=140 Identities=21% Similarity=0.232 Sum_probs=96.1
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.|+.|++|.||+|...++..||||+.+++.... -+|.+|++
T Consensus 12 ~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~~--------------------------------------~~~~~e~~ 53 (260)
T cd05073 12 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSV--------------------------------------EAFLAEAN 53 (260)
T ss_pred eEecCccceEEEEEEecCCccEEEEecCCChhHH--------------------------------------HHHHHHHH
Confidence 6799999999999997778889999876542110 01344555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHHH--HH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--AH 167 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~~--l~ 167 (864)
.+.++.+. ..+.+.........+++|||++|.+|.++..... ...+...+...+.+++ +.
T Consensus 54 ~l~~l~~~-----------------~i~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~ 116 (260)
T cd05073 54 VMKTLQHD-----------------KLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMA 116 (260)
T ss_pred HHHhcCCC-----------------CcceEEEEEcCCCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHH
Confidence 55554321 1233333333556789999999999988754221 1233444444343333 67
Q ss_pred HHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 168 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 168 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
.+|..|++|+|++|.||+++.+ +.++|+|||.+..+..
T Consensus 117 ~lH~~~i~H~dl~p~ni~i~~~--~~~~l~d~~~~~~~~~ 154 (260)
T cd05073 117 FIEQRNYIHRDLRAANILVSAS--LVCKIADFGLARVIED 154 (260)
T ss_pred HHHhCCccccccCcceEEEcCC--CcEEECCCcceeeccC
Confidence 8899999999999999999865 8999999999876643
No 201
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.24 E-value=3e-11 Score=131.21 Aligned_cols=138 Identities=17% Similarity=0.203 Sum_probs=92.0
Q ss_pred cccccccceeeEEEEec------CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 11 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 11 ~plasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
+.||.|++|.||+|+.+ .+..||||+........ .+.+
T Consensus 12 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~ 55 (288)
T cd05061 12 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR------------------------------------ERIE 55 (288)
T ss_pred eeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHH------------------------------------HHHH
Confidence 67999999999999753 25589999765322100 1112
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhc---------C
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAF---------G 151 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~---------~ 151 (864)
+.+|...+.++.+ + .|++++. ....+++|||++|++|.+....... .
T Consensus 56 ~~~e~~~l~~l~~------------------~--~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~ 115 (288)
T cd05061 56 FLNEASVMKGFTC------------------H--HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 115 (288)
T ss_pred HHHHHHHHHhCCC------------------C--CeeeEEEEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCC
Confidence 4445555555422 1 2333332 5668999999999999988642211 1
Q ss_pred CCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 152 VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 152 ~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.....+...+.+++ +..+|+.|++|+|+||.||+++.+ +.++|+|||+++.+.
T Consensus 116 ~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~--~~~~L~Dfg~~~~~~ 170 (288)
T cd05061 116 PTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHD--FTVKIGDFGMTRDIY 170 (288)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCC--CcEEECcCCcccccc
Confidence 12233333333333 678899999999999999999865 899999999987653
No 202
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.24 E-value=1.5e-11 Score=132.24 Aligned_cols=143 Identities=16% Similarity=0.118 Sum_probs=95.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
++||+|++|+||+|+.+ +|+.||||+..+....... .+-.+..|.
T Consensus 7 ~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~----------------------------------~~~~~~~e~ 52 (280)
T cd05581 7 KIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEK----------------------------------KVKYVKIEK 52 (280)
T ss_pred eeecCCCceEEEEEEEcCCCCEEEEEEechHhccchH----------------------------------HHHHHHHHH
Confidence 68999999999999986 7999999987542110000 000122233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..+.++.. ...|++++. ....+++|||++|.+|.+.... ...+....+...+.+++
T Consensus 53 ~~~~~l~~-------------------~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~i~~ql~ 112 (280)
T cd05581 53 EVLTRLNG-------------------HPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRK-YGSLDEKCTRFYAAEIL 112 (280)
T ss_pred HHHHhccc-------------------CCCchhHHHHhcCCceEEEEEcCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 33333220 011222221 3557899999999999877542 22455555555444444
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHH
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 209 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 209 (864)
+..+|..|++|+|++|.||+++.+ ++++|+|||++..+....
T Consensus 113 ~~l~~Lh~~~~~H~dl~~~ni~i~~~--~~~~l~df~~~~~~~~~~ 156 (280)
T cd05581 113 LALEYLHSKGIIHRDLKPENILLDKD--MHIKITDFGTAKVLDPNS 156 (280)
T ss_pred HHHHHHHHCCeeecCCCHHHeEECCC--CCEEecCCccccccCCcc
Confidence 678999999999999999999865 899999999988776533
No 203
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.24 E-value=4.2e-11 Score=127.02 Aligned_cols=140 Identities=13% Similarity=0.131 Sum_probs=96.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|+||+|+.+ +|+.|++|......... . ..-++.+|.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~--~---------------------------------~~~~~~~e~ 50 (256)
T cd08529 6 NKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNR--R---------------------------------EREEAIDEA 50 (256)
T ss_pred EEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCH--H---------------------------------HHHHHHHHH
Confidence 67999999999999976 79999999754211000 0 011234455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHh-hcCCCHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRA 164 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~l~~~~~~~ 164 (864)
+.+.++++ + .+.+++. ....+++|||++|.+|.++.... ....+...+...+.++
T Consensus 51 ~~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l 110 (256)
T cd08529 51 RVLAKLDS------------------S--YIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQI 110 (256)
T ss_pred HHHHhcCC------------------C--CeehheeeeccCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHH
Confidence 55554432 1 1222221 34578999999999998875432 2334555555544444
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 111 ~~al~~lH~~~i~h~dl~~~nili~~~--~~~~l~df~~~~~~~~ 153 (256)
T cd08529 111 LLGLAHLHSKKILHRDIKSLNLFLDAY--DNVKIGDLGVAKLLSD 153 (256)
T ss_pred HHHHHHHHHCCcccCCCCcceEEEeCC--CCEEEcccccceeccC
Confidence 3 778899999999999999999865 8999999999887654
No 204
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.24 E-value=4.6e-11 Score=129.25 Aligned_cols=138 Identities=12% Similarity=0.188 Sum_probs=93.2
Q ss_pred cccccccceeeEEEEec-----CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 11 TPLATASIAQVHRATLV-----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-----~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
+.||+|++|+||+|+.. +++.|+||..+....... .-++
T Consensus 11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~------------------------------------~~~~ 54 (283)
T cd05090 11 EELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQ------------------------------------WGEF 54 (283)
T ss_pred eeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHH------------------------------------HHHH
Confidence 67999999999999852 568899997654221110 0124
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhh------------
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEA------------ 149 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~------------ 149 (864)
.+|++.+.++++ ++ +++++ . ....+++|||++|.+|.++.....
T Consensus 55 ~~E~~~l~~l~h------------------~n--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 114 (283)
T cd05090 55 QQEASLMAELHH------------------PN--IVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDED 114 (283)
T ss_pred HHHHHHHhhCCC------------------CC--eeeEEEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccc
Confidence 445555555432 12 23333 2 456789999999999988753221
Q ss_pred ----cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 150 ----FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 150 ----~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..++...+...+.++. +..+|..|++|+|+||.|||++.+ +.++|+|||+++.+.
T Consensus 115 ~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~--~~~kl~dfg~~~~~~ 175 (283)
T cd05090 115 GTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQ--LHVKISDLGLSREIY 175 (283)
T ss_pred cccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCC--CcEEecccccccccc
Confidence 1123344444444433 788999999999999999999865 789999999988764
No 205
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.24 E-value=4.3e-11 Score=129.17 Aligned_cols=140 Identities=19% Similarity=0.178 Sum_probs=97.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|+.|++|+||+|+.. +++.||+|+.+....... -+|..|+
T Consensus 11 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~-------------------------------------~~~~~e~ 53 (280)
T cd06611 11 GELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEEL-------------------------------------EDFMVEI 53 (280)
T ss_pred HHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHH-------------------------------------HHHHHHH
Confidence 56999999999999975 799999998765422211 0144455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
..+.++.+. .-+.+...+. ....++||||++|.+|.++.......++...+...+.+++ +
T Consensus 54 ~~l~~l~h~-----------------~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l 116 (280)
T cd06611 54 DILSECKHP-----------------NIVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEAL 116 (280)
T ss_pred HHHHhCCCC-----------------ceeEEEEEEecCCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence 555554321 0122222222 4567899999999999887543333455555555544444 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..+|..|++|+|++|.||+++.+ ++++|+|||++....
T Consensus 117 ~~lh~~~i~h~dl~p~nili~~~--~~~~l~d~g~~~~~~ 154 (280)
T cd06611 117 NFLHSHKVIHRDLKAGNILLTLD--GDVKLADFGVSAKNK 154 (280)
T ss_pred HHHHHCCcccCCCChhhEEECCC--CCEEEccCccchhhc
Confidence 78899999999999999999865 899999999876553
No 206
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.24 E-value=4.2e-11 Score=128.95 Aligned_cols=143 Identities=17% Similarity=0.190 Sum_probs=96.9
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|+||+|+.. +|+.||||+.+......... ++.+|.
T Consensus 7 ~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~------------------------------------~~~~e~ 50 (277)
T cd06917 7 ELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVS------------------------------------DIQREV 50 (277)
T ss_pred hheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHH------------------------------------HHHHHH
Confidence 57999999999999975 89999999876543211000 133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCE-EEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v-~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
+.+.++... .++.+ .+...+. ....+|+|||++|.+|.++.. ...+....+...+.+++
T Consensus 51 ~~l~~l~~~---------------~~~~vi~~~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~l~~~~~~~i~~~i~~~ 113 (277)
T cd06917 51 ALLSQLRQS---------------QPPNITKYYGSYLKGPRLWIIMEYAEGGSVRTLMK--AGPIAEKYISVIIREVLVA 113 (277)
T ss_pred HHHHHhccC---------------CCCCeeeEeeeeeeCCEEEEEEecCCCCcHHHHHH--ccCCCHHHHHHHHHHHHHH
Confidence 555555321 11222 1222222 556789999999999987753 23445444444333333
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+...
T Consensus 114 l~~lh~~~i~H~dl~p~ni~i~~~--~~~~l~dfg~~~~~~~~ 154 (277)
T cd06917 114 LKYIHKVGVIHRDIKAANILVTNT--GNVKLCDFGVAALLNQN 154 (277)
T ss_pred HHHHHhCCcccCCcCHHHEEEcCC--CCEEEccCCceeecCCC
Confidence 778999999999999999999965 89999999998876543
No 207
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.24 E-value=2.1e-11 Score=137.07 Aligned_cols=128 Identities=15% Similarity=0.119 Sum_probs=87.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|+||+|+.. +++.||+|+...+.. ..|+
T Consensus 72 ~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~~-------------------------------------------~~E~ 108 (357)
T PHA03209 72 KTLTPGSEGRVFVATKPGQPDPVVLKIGQKGTT-------------------------------------------LIEA 108 (357)
T ss_pred EEecCCCCeEEEEEEECCCCceEEEEeCCcccc-------------------------------------------HHHH
Confidence 67999999999999976 688999997543211 1133
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..+.++++ + .|.+++ . ....++|||++.| .|.++.......+....+...+.+++
T Consensus 109 ~~l~~l~h------------------~--~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~ 167 (357)
T PHA03209 109 MLLQNVNH------------------P--SVIRMKDTLVSGAITCMVLPHYSS-DLYTYLTKRSRPLPIDQALIIEKQIL 167 (357)
T ss_pred HHHHhCCC------------------C--CCcChhheEEeCCeeEEEEEccCC-cHHHHHHhccCCCCHHHHHHHHHHHH
Confidence 33333322 1 122222 2 4457899999976 45444332333455555555444443
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
+..+|..|++|||+||.|||++.+ +.++|+|||++..
T Consensus 168 ~aL~~LH~~~ivHrDlkp~Nill~~~--~~~kl~DfG~a~~ 206 (357)
T PHA03209 168 EGLRYLHAQRIIHRDVKTENIFINDV--DQVCIGDLGAAQF 206 (357)
T ss_pred HHHHHHHHCCeecCCCCHHHEEECCC--CCEEEecCccccc
Confidence 888999999999999999999865 8899999998864
No 208
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.23 E-value=2.4e-11 Score=131.64 Aligned_cols=143 Identities=17% Similarity=0.201 Sum_probs=89.9
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|.||+|+.+ +|+.||||+.+...... . ...++.+|.
T Consensus 6 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~--------------------~---------------~~~~~~~e~ 50 (288)
T cd07863 6 AEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNED--------------------G---------------LPLSTVREV 50 (288)
T ss_pred eEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCC--------------------C---------------CchHHHHHH
Confidence 56999999999999976 79999999876422110 0 000122233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCE-EEeeEEe------cCCceEEEeecCCcCCCChHHHh-hcCCCHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ------SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEI 161 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v-~vP~v~~------~~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~l~~~~ 161 (864)
..+.+++.. +++.+ .+-.++. ....+++|||++| ++.++.... ..++....+...+
T Consensus 51 ~~l~~l~~~---------------~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~ 114 (288)
T cd07863 51 ALLKRLEAF---------------DHPNIVRLMDVCATSRTDRETKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLM 114 (288)
T ss_pred HHHHHhhhc---------------CCCCeeeeeeeeccccCCCCceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHH
Confidence 334444321 11111 1112221 1235799999986 555443221 1234555555555
Q ss_pred HHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 162 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 162 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.+++ +..+|..|++|+|+||+||+++.+ +.++|+|||++..+.
T Consensus 115 ~qi~~al~~lH~~~ivH~dikp~Nili~~~--~~~kl~dfg~~~~~~ 159 (288)
T cd07863 115 RQFLRGLDFLHANCIVHRDLKPENILVTSG--GQVKLADFGLARIYS 159 (288)
T ss_pred HHHHHHHHHHHhCCeecCCCCHHHEEECCC--CCEEECccCcccccc
Confidence 5544 788999999999999999999865 899999999987654
No 209
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.23 E-value=4.8e-11 Score=121.11 Aligned_cols=140 Identities=20% Similarity=0.270 Sum_probs=99.4
Q ss_pred cccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHHH
Q 002927 13 LATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAEN 91 (864)
Q Consensus 13 lasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~n 91 (864)
|++|++|+||+++.. +|++++||+.++..... .+-.+.+|.+.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~------------------------------------~~~~~~~e~~~ 44 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS------------------------------------LLEELLREIEI 44 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh------------------------------------HHHHHHHHHHH
Confidence 689999999999976 49999999987665422 00113445555
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 92 TRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
+.++.+ ..+++++. ....+++|||++|.+|.++........+...+...+.+++
T Consensus 45 ~~~l~~--------------------~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 104 (215)
T cd00180 45 LKKLNH--------------------PNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEG 104 (215)
T ss_pred HHhcCC--------------------CCeeeEeeeeecCCeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHH
Confidence 555422 23455543 3568899999999999887543212455555555444443
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHH
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 209 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 209 (864)
+..+|..|++|+|++|+||+++.. +++++|+|||++.......
T Consensus 105 l~~lh~~~~~H~dl~~~ni~~~~~-~~~~~l~d~~~~~~~~~~~ 147 (215)
T cd00180 105 LEYLHSNGIIHRDLKPENILLDSD-NGKVKLADFGLSKLLTSDK 147 (215)
T ss_pred HHHHHhCCeeccCCCHhhEEEeCC-CCcEEEecCCceEEccCCc
Confidence 788999999999999999999861 3799999999998776543
No 210
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.23 E-value=2.3e-11 Score=131.41 Aligned_cols=142 Identities=20% Similarity=0.225 Sum_probs=95.3
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|+||+|+.+ +|+.||+|+......... . +-.+.+|+
T Consensus 7 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~-----------------------------~------~~~~~~e~ 51 (286)
T cd07847 7 SKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPV-----------------------------I------KKIALREI 51 (286)
T ss_pred eeecccCCeEEEEEEECCCCcEEEEEEEeecccCcc-----------------------------c------cHHHHHHH
Confidence 56999999999999987 799999998643211000 0 00133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
..+.++.+. .-+.+...+. ....+++|||++|..+..+.. .....+...+...+.+++ +
T Consensus 52 ~~l~~~~h~-----------------~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~ql~~~l 113 (286)
T cd07847 52 RMLKQLKHP-----------------NLVNLIEVFRRKRKLHLVFEYCDHTVLNELEK-NPRGVPEHLIKKIIWQTLQAV 113 (286)
T ss_pred HHHHhCCCC-----------------CEeeeeeEEeeCCEEEEEEeccCccHHHHHHh-CCCCCCHHHHHHHHHHHHHHH
Confidence 444443220 0122223333 456789999999987776532 222355555555555554 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+|..|++|+|+||.||+++.+ ++++|+|||++..+..
T Consensus 114 ~~LH~~~i~H~dl~p~nil~~~~--~~~~l~dfg~~~~~~~ 152 (286)
T cd07847 114 NFCHKHNCIHRDVKPENILITKQ--GQIKLCDFGFARILTG 152 (286)
T ss_pred HHHHHCCceecCCChhhEEEcCC--CcEEECccccceecCC
Confidence 78899999999999999999865 8999999999987754
No 211
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.23 E-value=3.8e-11 Score=127.62 Aligned_cols=81 Identities=17% Similarity=0.107 Sum_probs=61.1
Q ss_pred CCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCC-----CceEEEec
Q 002927 127 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPP-----HRPILLDF 199 (864)
Q Consensus 127 ~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~-----g~i~LiDF 199 (864)
...+|+|||++|.+|.++........+...+...+.+++ +..+|..|++|+|+||.||+++.+.. ..++|+||
T Consensus 73 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Df 152 (259)
T cd05037 73 DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDP 152 (259)
T ss_pred CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCC
Confidence 567999999999999887654333455555555444443 78899999999999999999986521 16999999
Q ss_pred ccccccCh
Q 002927 200 GLTKKLSS 207 (864)
Q Consensus 200 G~~~~l~~ 207 (864)
|++..+..
T Consensus 153 g~a~~~~~ 160 (259)
T cd05037 153 GIPITVLS 160 (259)
T ss_pred Cccccccc
Confidence 99876543
No 212
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=99.23 E-value=1.5e-10 Score=117.95 Aligned_cols=70 Identities=37% Similarity=0.716 Sum_probs=56.2
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
++..+|+||||+|.+|.+...+. +.+...+.+ .++++|.+|++|+||||||++++. +.+++|||+..+..
T Consensus 115 ~~~~~ll~EYIeG~~l~d~~~i~------e~~~~ki~~-~ikqlH~~G~~HGD~hpgNFlv~~---~~i~iID~~~k~~~ 184 (229)
T PF06176_consen 115 TSSYVLLMEYIEGVELNDIEDID------EDLAEKIVE-AIKQLHKHGFYHGDPHPGNFLVSN---NGIRIIDTQGKRMS 184 (229)
T ss_pred eeEEEEEEEEecCeecccchhcC------HHHHHHHHH-HHHHHHHcCCccCCCCcCcEEEEC---CcEEEEECcccccc
Confidence 57788999999999999875432 234444444 479999999999999999999984 46999999987753
No 213
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.23 E-value=5.4e-11 Score=126.79 Aligned_cols=138 Identities=19% Similarity=0.249 Sum_probs=92.7
Q ss_pred ccccccceeeEEEEec---CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 12 PLATASIAQVHRATLV---DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 12 plasaSigqV~~A~l~---~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
.||+|++|.||+|..+ +++.||||+.+....... .. -++..|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~-------------------------~~----------~~~~~e 46 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPA-------------------------LK----------DELLRE 46 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHH-------------------------HH----------HHHHHH
Confidence 4899999999999753 688999998754321110 00 013334
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---ecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---QSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
...+.++.+ +. +.+++ .....+|+|||+++.+|.++.... ...+...+...+.++.
T Consensus 47 ~~~l~~l~h------------------~~--i~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~ 105 (257)
T cd05116 47 ANVMQQLDN------------------PY--IVRMIGICEAESWMLVMELAELGPLNKFLQKN-KHVTEKNITELVHQVS 105 (257)
T ss_pred HHHHHhCCC------------------CC--cceEEEEEcCCCcEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHH
Confidence 444444321 11 22222 245678999999999998875422 2345555555544444
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 106 ~al~~lH~~~i~H~dlkp~nill~~~--~~~kl~Dfg~~~~~~~ 147 (257)
T cd05116 106 MGMKYLEETNFVHRDLAARNVLLVTQ--HYAKISDFGLSKALGA 147 (257)
T ss_pred HHHHHHHHCCEeecccchhhEEEcCC--CeEEECCCccccccCC
Confidence 788999999999999999999865 7899999999876643
No 214
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.23 E-value=5.2e-11 Score=134.08 Aligned_cols=73 Identities=21% Similarity=0.427 Sum_probs=53.4
Q ss_pred CceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 128 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 128 ~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
..++||||++| .+.+.. ....+...+...+.+++ +..+|..|++|||+||.||+++.+ +.++|+|||+++..
T Consensus 103 ~~~lv~e~~~~-~l~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~--~~~kL~DfG~a~~~ 176 (364)
T cd07875 103 DVYIVMELMDA-NLCQVI---QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD--CTLKILDFGLARTA 176 (364)
T ss_pred eEEEEEeCCCC-CHHHHH---HhcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCC--CcEEEEeCCCcccc
Confidence 45899999987 333322 12344444444444433 788999999999999999999865 89999999998765
Q ss_pred C
Q 002927 206 S 206 (864)
Q Consensus 206 ~ 206 (864)
.
T Consensus 177 ~ 177 (364)
T cd07875 177 G 177 (364)
T ss_pred C
Confidence 3
No 215
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.23 E-value=3.6e-11 Score=138.93 Aligned_cols=76 Identities=20% Similarity=0.204 Sum_probs=51.8
Q ss_pred ceEEEeecCCcCCCChHHH---hhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 129 TVLILEFMDGIRLNDCESL---EAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 129 ~vLvmE~i~G~~L~~~~~~---~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
.++||||++| ++.++... ....+....+...+.+++ +..+|..|++|||+||.|||++.+ ++.++|+|||+++
T Consensus 142 l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~-~~~vkL~DFGla~ 219 (440)
T PTZ00036 142 LNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPN-THTLKLCDFGSAK 219 (440)
T ss_pred EEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCC-CCceeeeccccch
Confidence 3589999987 44333221 112233333333333333 788999999999999999999854 3579999999987
Q ss_pred ccC
Q 002927 204 KLS 206 (864)
Q Consensus 204 ~l~ 206 (864)
.+.
T Consensus 220 ~~~ 222 (440)
T PTZ00036 220 NLL 222 (440)
T ss_pred hcc
Confidence 654
No 216
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.23 E-value=3.2e-11 Score=137.21 Aligned_cols=131 Identities=13% Similarity=0.077 Sum_probs=87.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.. +++.||||+... . .+.+|+
T Consensus 98 ~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---~----------------------------------------~~~~E~ 134 (391)
T PHA03212 98 ETFTPGAEGFAFACIDNKTCEHVVIKAGQR---G----------------------------------------GTATEA 134 (391)
T ss_pred EEEcCCCCeEEEEEEECCCCCEEEEechhh---h----------------------------------------hhHHHH
Confidence 56999999999999975 799999995220 0 023355
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
+.+.++++. .-+.+-..+. ....+++||++.| .|.+... .........+...+.+++ +
T Consensus 135 ~il~~l~Hp-----------------nIv~~~~~~~~~~~~~lv~e~~~~-~L~~~l~-~~~~l~~~~~~~i~~qi~~aL 195 (391)
T PHA03212 135 HILRAINHP-----------------SIIQLKGTFTYNKFTCLILPRYKT-DLYCYLA-AKRNIAICDILAIERSVLRAI 195 (391)
T ss_pred HHHHhCCCC-----------------CCCCEeEEEEECCeeEEEEecCCC-CHHHHHH-hcCCCCHHHHHHHHHHHHHHH
Confidence 555554321 0122222232 4567899999964 4444322 223455555555444443 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
..+|..|++|||+||+|||++.+ +.++|+|||++...
T Consensus 196 ~ylH~~~IvHrDiKP~NIll~~~--~~vkL~DFG~a~~~ 232 (391)
T PHA03212 196 QYLHENRIIHRDIKAENIFINHP--GDVCLGDFGAACFP 232 (391)
T ss_pred HHHHhCCcccCCCChHhEEEcCC--CCEEEEeCCccccc
Confidence 88999999999999999999865 89999999998643
No 217
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.23 E-value=4.4e-11 Score=128.95 Aligned_cols=140 Identities=18% Similarity=0.176 Sum_probs=92.9
Q ss_pred cccccccceeeEEEEecC------CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 11 TPLATASIAQVHRATLVD------GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~------G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
+.||.|++|.||+|+..+ ++.||||+.+....... +-+
T Consensus 11 ~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------~~~ 54 (280)
T cd05049 11 RELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDA------------------------------------RKD 54 (280)
T ss_pred hhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHH------------------------------------HHH
Confidence 679999999999998743 57899998654322111 112
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhh-------------c
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-------------F 150 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~-------------~ 150 (864)
|.+|++.+.++.+. ..+.+..... ....+++|||++|.+|.++..... .
T Consensus 55 ~~~e~~~l~~l~~~-----------------~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~ 117 (280)
T cd05049 55 FEREAELLTNFQHE-----------------NIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMG 117 (280)
T ss_pred HHHHHHHHHhcCCC-----------------CchheeeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccc
Confidence 44566666655321 0111222222 566899999999999988754221 1
Q ss_pred CCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 151 GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 151 ~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
......+...+.+++ +..+|..|++|+|++|+||+++.+ +.++|+|||++..+
T Consensus 118 ~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~--~~~kl~d~g~~~~~ 172 (280)
T cd05049 118 ELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYD--LVVKIGDFGMSRDV 172 (280)
T ss_pred cccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCC--CeEEECCcccceec
Confidence 122333333333333 678899999999999999999865 89999999998754
No 218
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.23 E-value=4.3e-11 Score=129.13 Aligned_cols=141 Identities=16% Similarity=0.143 Sum_probs=93.8
Q ss_pred cccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHHH
Q 002927 13 LATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAEN 91 (864)
Q Consensus 13 lasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~n 91 (864)
|++|++|.||+|... +|+.||||+......... ..+..+..|.+.
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~----------------------------------~~~~~~~~e~~~ 46 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKR----------------------------------KGEQMALNEKKI 46 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhh----------------------------------hhhHHHHHHHHH
Confidence 689999999999865 799999998654221100 011123446655
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHHH--HH
Q 002927 92 TRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--AH 167 (864)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~~--l~ 167 (864)
+.++++. .-+.+...+. ....+|+|||++|.+|.+...... ..+....+...+.+++ +.
T Consensus 47 l~~l~~~-----------------~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~ 109 (277)
T cd05577 47 LEKVSSR-----------------FIVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLE 109 (277)
T ss_pred HHhCCCC-----------------CEeeeeeEEecCCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHH
Confidence 5554321 0122222232 456789999999999987654322 1345555444444433 67
Q ss_pred HHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 168 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 168 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.+|..|++|+|++|.||+++.+ +.++|+|||.+..+.
T Consensus 110 ~lH~~~i~H~di~p~Nil~~~~--~~~~l~dfg~~~~~~ 146 (277)
T cd05577 110 HLHQRRIVYRDLKPENVLLDDH--GNVRISDLGLAVELK 146 (277)
T ss_pred HHHhCCcccCCCCHHHEEECCC--CCEEEccCcchhhhc
Confidence 8899999999999999999865 899999999876553
No 219
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.23 E-value=4.8e-11 Score=127.46 Aligned_cols=143 Identities=16% Similarity=0.145 Sum_probs=94.6
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|+.|++|.||+|... +|+.||||+.++..... . . ..-++.+|.
T Consensus 8 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~----~------------------------~------~~~~~~~ei 53 (267)
T cd08224 8 KKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMD----A------------------------K------ARQDCLKEI 53 (267)
T ss_pred eeeccCCceEEEEEEEcCCCCEEEEEEeecccccc----h------------------------h------hHHHHHHHH
Confidence 67999999999999987 89999999765311100 0 0 001133454
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHh---hcCCCHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEITRA 164 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~---~~~~~~~~l~~~~~~~ 164 (864)
+.+.++.+ +. +.+...+. ....+++|||++|.+|.++.... ........+...+.++
T Consensus 54 ~~l~~~~~------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l 115 (267)
T cd08224 54 DLLKQLDH------------------PNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQL 115 (267)
T ss_pred HHHHhCCC------------------CCeeeeeeeeecCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHH
Confidence 44444322 11 11122222 45578999999999998765321 1223455555555544
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+ +..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 116 ~~~l~~lh~~~i~h~dl~p~nil~~~~--~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 116 CSALEHMHSKRIMHRDIKPANVFITAT--GVVKLGDLGLGRFFSS 158 (267)
T ss_pred HHHHHHHHhCCEecCCcChhhEEECCC--CcEEEeccceeeeccC
Confidence 4 778899999999999999999865 8999999999876543
No 220
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.22 E-value=3.3e-11 Score=134.31 Aligned_cols=53 Identities=15% Similarity=0.221 Sum_probs=41.1
Q ss_pred CHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 153 NKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 153 ~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+...+...+.++. +..+|..|++|||+||.|||++.+ +.++|+|||++..+..
T Consensus 171 ~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~--~~vkL~DfG~a~~~~~ 225 (337)
T cd05054 171 TLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSEN--NVVKICDFGLARDIYK 225 (337)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCC--CcEEEeccccchhccc
Confidence 3333444444433 788999999999999999999865 8899999999887643
No 221
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.22 E-value=2.8e-11 Score=136.72 Aligned_cols=140 Identities=18% Similarity=0.225 Sum_probs=87.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.. +|+.||||+........ .. .-.+.+|+
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----~~------------------------------~~~~~~E~ 50 (372)
T cd07853 6 RPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNL-----VS------------------------------CKRVFREL 50 (372)
T ss_pred ceeeeCCCEEEEEEEECCCCCEEEEEeccccccch-----HH------------------------------HHHHHHHH
Confidence 67999999999999975 89999999764221110 00 00123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe------cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITR 163 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~ 163 (864)
+.+..+++.. -+.+-.++. ....+++|||+.+ +|.+... ....+....+...+.+
T Consensus 51 ~~l~~l~h~n-----------------iv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~-~~~~l~~~~~~~~~~q 111 (372)
T cd07853 51 KMLCFFKHDN-----------------VLSALDILQPPHIDPFEEIYVVTELMQS-DLHKIIV-SPQPLSSDHVKVFLYQ 111 (372)
T ss_pred HHHHhCCCCC-----------------cCCHhheecCCCccccceEEEEeecccc-CHHHHHh-cCCCCCHHHHHHHHHH
Confidence 4444443210 011111111 1246899999975 4433321 1223444444444444
Q ss_pred HH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 164 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 164 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
++ +..+|..|++|+|+||.|||++.+ +.++|+|||++....
T Consensus 112 i~~aL~~LH~~~ivH~dlkp~Nili~~~--~~~kL~Dfg~a~~~~ 154 (372)
T cd07853 112 ILRGLKYLHSAGILHRDIKPGNLLVNSN--CVLKICDFGLARVEE 154 (372)
T ss_pred HHHHHHHHHhCCeeCCCCChHHEEECCC--CCEEeccccceeecc
Confidence 33 788999999999999999999865 899999999987543
No 222
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.22 E-value=3.2e-11 Score=130.14 Aligned_cols=80 Identities=18% Similarity=0.140 Sum_probs=58.9
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCC-----CCceEEEe
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDP-----PHRPILLD 198 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~-----~g~i~LiD 198 (864)
....+|||||++|.+|.++........+.......+.++. +..+|+.|++|+|+||.||+++..+ ...+++.|
T Consensus 88 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d 167 (274)
T cd05076 88 GSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSD 167 (274)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCccceeeecC
Confidence 4678999999999999877543333455555554444444 7889999999999999999997531 12478999
Q ss_pred ccccccc
Q 002927 199 FGLTKKL 205 (864)
Q Consensus 199 FG~~~~l 205 (864)
||++...
T Consensus 168 ~g~~~~~ 174 (274)
T cd05076 168 PGVSFTA 174 (274)
T ss_pred Ccccccc
Confidence 9987543
No 223
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.22 E-value=5.9e-11 Score=127.32 Aligned_cols=78 Identities=18% Similarity=0.103 Sum_probs=57.1
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcC----CCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEec
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFG----VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDF 199 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~----~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDF 199 (864)
....+|||||++|.+|.++....... .+...+...+.++. +..+|+.|++|+|+||.||+++.+ ++++|+||
T Consensus 67 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~--~~~kl~df 144 (269)
T cd05042 67 SIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTAD--LSVKIGDY 144 (269)
T ss_pred CCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCC--CcEEEecc
Confidence 45688999999999998875432211 12222333333332 678999999999999999999865 89999999
Q ss_pred cccccc
Q 002927 200 GLTKKL 205 (864)
Q Consensus 200 G~~~~l 205 (864)
|++...
T Consensus 145 g~~~~~ 150 (269)
T cd05042 145 GLALEQ 150 (269)
T ss_pred cccccc
Confidence 987654
No 224
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.22 E-value=2.9e-11 Score=131.86 Aligned_cols=139 Identities=20% Similarity=0.231 Sum_probs=93.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
..||+|++|+||+|+.+ +|+.||||+.+-.... .+-.+.+|.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~-------------------------------------~~~~~~~e~ 68 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQ-------------------------------------RRELLFNEV 68 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchh-------------------------------------HHHHHHHHH
Confidence 46999999999999975 8999999975422110 001133344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
..+.++.+. .-+.+...+. ....+++|||++|.+|.++.. ....+...+...+.+++ +
T Consensus 69 ~~l~~l~h~-----------------~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~ql~~~l 129 (292)
T cd06657 69 VIMRDYQHE-----------------NVVEMYNSYLVGDELWVVMEFLEGGALTDIVT--HTRMNEEQIAAVCLAVLKAL 129 (292)
T ss_pred HHHHhcCCc-----------------chhheeeEEEeCCEEEEEEecCCCCcHHHHHh--cCCCCHHHHHHHHHHHHHHH
Confidence 444433210 0112222222 456789999999999987643 23345555555444444 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 130 ~~lH~~givH~dl~p~Nilv~~~--~~~~l~dfg~~~~~~~ 168 (292)
T cd06657 130 SVLHAQGVIHRDIKSDSILLTHD--GRVKLSDFGFCAQVSK 168 (292)
T ss_pred HHHHHCCeecCCCCHHHEEECCC--CCEEEcccccceeccc
Confidence 88999999999999999999865 8899999998876654
No 225
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.22 E-value=3.1e-11 Score=131.09 Aligned_cols=138 Identities=20% Similarity=0.209 Sum_probs=93.4
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
++||+|++|.||+|+.+ +|+.||||..+....... ...+.+|.
T Consensus 11 ~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~------------------------------------~~~~~~E~ 54 (291)
T cd07844 11 DKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGA------------------------------------PFTAIREA 54 (291)
T ss_pred EEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCC------------------------------------chhHHHHH
Confidence 78999999999999976 799999998654321100 00123455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
..+.++.+ +. +.+..++. ....++||||++| +|.++........+...+...+.+++
T Consensus 55 ~~l~~l~h------------------~~i~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~a 115 (291)
T cd07844 55 SLLKDLKH------------------ANIVTLHDIIHTKKTLTLVFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRG 115 (291)
T ss_pred HHHhhCCC------------------cceeeEEEEEecCCeEEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHH
Confidence 55555432 11 22222222 4567899999987 67665432223445555555544444
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+..+|..|++|+|++|.||+++.+ +.++|+|||++...
T Consensus 116 l~~lH~~~i~H~dl~p~nil~~~~--~~~kl~dfg~~~~~ 153 (291)
T cd07844 116 LAYCHQRRVLHRDLKPQNLLISER--GELKLADFGLARAK 153 (291)
T ss_pred HHHHHhCCeecccCCHHHEEEcCC--CCEEECcccccccc
Confidence 788999999999999999999865 89999999987654
No 226
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.22 E-value=5.3e-11 Score=127.42 Aligned_cols=138 Identities=15% Similarity=0.161 Sum_probs=94.3
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.. +++.||||+.+....... . .+.+|.
T Consensus 15 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~----~---------------------------------~~~~e~ 57 (267)
T cd06645 15 QRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDF----A---------------------------------VVQQEI 57 (267)
T ss_pred HHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHH----H---------------------------------HHHHHH
Confidence 67999999999999975 799999999765432211 0 012233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
..+..+.+ +. +.+...+. ....+++|||++|.+|.++... ....+...+...+.+++
T Consensus 58 ~~~~~l~h------------------~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~ 118 (267)
T cd06645 58 IMMKDCKH------------------SNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHV-TGPLSESQIAYVSRETLQG 118 (267)
T ss_pred HHHHhCCC------------------CCeeeEEEEEEeCCEEEEEEeccCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHH
Confidence 33333211 11 12222222 4567899999999999887542 22355555555555444
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|+|++|+||+++.+ +.++|+|||++..+.
T Consensus 119 l~~lH~~~i~H~dlkp~nili~~~--~~~~l~dfg~~~~~~ 157 (267)
T cd06645 119 LYYLHSKGKMHRDIKGANILLTDN--GHVKLADFGVSAQIT 157 (267)
T ss_pred HHHHHHCCeecCCCCHHHEEECCC--CCEEECcceeeeEcc
Confidence 778899999999999999999865 899999999987664
No 227
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.22 E-value=7.7e-11 Score=127.36 Aligned_cols=136 Identities=20% Similarity=0.200 Sum_probs=90.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|.||+|+.. +|+.||||+...+..... +-++.+|.
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~------------------------------------~~~~~~E~ 50 (279)
T cd06619 7 EILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVEL------------------------------------QKQIMSEL 50 (279)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHH------------------------------------HHHHHHHH
Confidence 67999999999999975 899999998754321110 01134455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCE-EEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v-~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
+.+.++.+ +.+ .+...+. ....+|||||++|.++..... .+...+...+.+++
T Consensus 51 ~~l~~l~h------------------~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-----~~~~~~~~~~~qi~~~ 107 (279)
T cd06619 51 EILYKCDS------------------PYIIGFYGAFFVENRISICTEFMDGGSLDVYRK-----IPEHVLGRIAVAVVKG 107 (279)
T ss_pred HHHHhCCC------------------CCeeeEEEEEEECCEEEEEEecCCCCChHHhhc-----CCHHHHHHHHHHHHHH
Confidence 55444422 111 2222222 456789999999998864321 23333333333332
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|+.|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 108 l~~lH~~~i~H~dlkp~Nill~~~--~~~~l~dfg~~~~~~~ 147 (279)
T cd06619 108 LTYLWSLKILHRDVKPSNMLVNTR--GQVKLCDFGVSTQLVN 147 (279)
T ss_pred HHHHHHCCEeeCCCCHHHEEECCC--CCEEEeeCCcceeccc
Confidence 678999999999999999999865 8999999999876643
No 228
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.22 E-value=9.6e-11 Score=126.69 Aligned_cols=139 Identities=16% Similarity=0.182 Sum_probs=94.9
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|.||+|+.. ++..|++|.......+... ++.+|+
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~-------------------------------------~~~~e~ 53 (282)
T cd06643 11 GELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELE-------------------------------------DYMVEI 53 (282)
T ss_pred hhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHH-------------------------------------HHHHHH
Confidence 56999999999999976 6889999986543221110 133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
+.+..+.+ +. +.+...+. ....++||||++|.++.+.............+...+.+++
T Consensus 54 ~~l~~l~h------------------~~ii~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~ 115 (282)
T cd06643 54 DILASCDH------------------PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEA 115 (282)
T ss_pred HHHHHCCC------------------CCeeeEEEEEeeCCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 44444322 11 22222222 4567899999999998776432233455555555554444
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|+.|++|+|++|.||+++.+ ++++|+|||++....
T Consensus 116 L~~LH~~~i~H~dlkp~nili~~~--~~~kl~dfg~~~~~~ 154 (282)
T cd06643 116 LNYLHENKIIHRDLKAGNILFTLD--GDIKLADFGVSAKNT 154 (282)
T ss_pred HHHHHHCCeeecCCCcccEEEccC--CCEEEcccccccccc
Confidence 788999999999999999999865 899999999987654
No 229
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.22 E-value=6.9e-11 Score=127.72 Aligned_cols=138 Identities=16% Similarity=0.224 Sum_probs=93.0
Q ss_pred cccccccceeeEEEEec-CC-----CEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 11 TPLATASIAQVHRATLV-DG-----RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G-----~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
+.||.|++|.||+|... .+ +.||+|+.+........ -+
T Consensus 11 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~------------------------------------~~ 54 (283)
T cd05048 11 EELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQ------------------------------------QE 54 (283)
T ss_pred hcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHH------------------------------------HH
Confidence 67999999999999964 22 67999987643221111 01
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhh-----------
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEA----------- 149 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~----------- 149 (864)
|.+|.+.+.++.+ + .+.+++ . ....+++|||++|.+|.++.....
T Consensus 55 ~~~ei~~l~~l~h------------------~--~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 114 (283)
T cd05048 55 FRQEAELMSDLQH------------------P--NIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGD 114 (283)
T ss_pred HHHHHHHHHhcCC------------------c--ccceEEEEEcCCCceEEEEecCCCCcHHHHHHhcCCCccccccccc
Confidence 3445555554432 1 122222 2 456789999999999987754321
Q ss_pred ----cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 150 ----FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 150 ----~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..++...+...+.++. +..+|..|++|+|+||+||+++.+ +.++|+|||++..+.
T Consensus 115 ~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~--~~~~L~dfg~~~~~~ 175 (283)
T cd05048 115 ETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEG--LTVKISDFGLSRDIY 175 (283)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCC--CcEEECCCcceeecc
Confidence 2234444444444443 788999999999999999999865 889999999987653
No 230
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.22 E-value=6.8e-11 Score=126.49 Aligned_cols=140 Identities=21% Similarity=0.176 Sum_probs=94.4
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|.||+|..+ +++.||+|+...+.... -++.+|.
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~--------------------------------------~~~~~e~ 53 (263)
T cd05052 12 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--------------------------------------EEFLKEA 53 (263)
T ss_pred eecCCcccceEEEEEEecCCceEEEEEecCCchHH--------------------------------------HHHHHHH
Confidence 67999999999999976 68999999865432110 0133444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~~-- 165 (864)
+.+.++.+. .-+.+..... ....+++|||++|.+|.+...... ...+...+...+.+++
T Consensus 54 ~~l~~l~h~-----------------~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~ 116 (263)
T cd05052 54 AVMKEIKHP-----------------NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 116 (263)
T ss_pred HHHHhCCCC-----------------ChhheEEEEcCCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHH
Confidence 444443221 0122222222 456789999999999988754221 2244444444444433
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|++|.||+++++ +.++|+|||++..+..
T Consensus 117 l~~lH~~~i~H~dlkp~nil~~~~--~~~kl~df~~~~~~~~ 156 (263)
T cd05052 117 MEYLEKKNFIHRDLAARNCLVGEN--HLVKVADFGLSRLMTG 156 (263)
T ss_pred HHHHHhCCEeecccCcceEEEcCC--CcEEeCCCcccccccc
Confidence 678899999999999999999865 8999999999876653
No 231
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.21 E-value=7e-11 Score=124.96 Aligned_cols=144 Identities=19% Similarity=0.159 Sum_probs=97.8
Q ss_pred ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 10 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
.++|++|++|+||+|+.. +|+.|+||......... .+ .. ++.+|
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~---------------------------~~------~~~~e 49 (254)
T cd06627 5 GDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKE--EA---------------------------LK------SIMQE 49 (254)
T ss_pred eeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCH--HH---------------------------HH------HHHHH
Confidence 378999999999999976 78999999876432110 00 00 13345
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH-
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~- 165 (864)
++.+.++++ +. +.+..... ....+++|||++|.+|.++.... ...+...+...+.+++
T Consensus 50 ~~~l~~l~~------------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~ 110 (254)
T cd06627 50 IDLLKNLKH------------------PNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKF-GPFPESLVAVYVYQVLQ 110 (254)
T ss_pred HHHHHhCCC------------------CCccEEEEEEEeCCEEEEEEecCCCCcHHHHHHhc-cCCCHHHHHHHHHHHHH
Confidence 554444422 11 12222222 45678999999999998875422 3345555444444444
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHH
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 209 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 209 (864)
+..+|..|++|+|++|+||+++.+ +.++|+|||++..+....
T Consensus 111 ~l~~lH~~~i~H~dl~p~ni~i~~~--~~~~l~d~~~~~~~~~~~ 153 (254)
T cd06627 111 GLAYLHEQGVIHRDIKAANILTTKD--GVVKLADFGVATKLNDVS 153 (254)
T ss_pred HHHHHhhCCcccCCCCHHHEEECCC--CCEEEeccccceecCCCc
Confidence 678999999999999999999864 899999999998876543
No 232
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.21 E-value=6.6e-11 Score=125.72 Aligned_cols=141 Identities=16% Similarity=0.145 Sum_probs=92.6
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
++|+.|++|.||+|+.+ +|+.||||......... ... -.+.+|.
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~--~~~---------------------------------~~~~~e~ 50 (257)
T cd08223 6 RVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASR--RER---------------------------------KAAEQEA 50 (257)
T ss_pred EEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCH--HHH---------------------------------HHHHHHH
Confidence 67999999999999976 78999999754211100 000 0123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe--cCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ--SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~--~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~~ 165 (864)
+.+.++++ +. +.+...+. ....+++|||++|.+|.+...... .......+...+.+++
T Consensus 51 ~~l~~l~~------------------~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~ 112 (257)
T cd08223 51 QLLSQLKH------------------PNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIA 112 (257)
T ss_pred HHHHhCCC------------------CCeeeeeeeecCCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 44444322 11 12222222 223579999999999987754322 2245555555554444
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+.
T Consensus 113 ~~l~~lH~~~i~H~di~p~nil~~~~--~~~~l~df~~~~~~~ 153 (257)
T cd08223 113 MALQYLHEKHILHRDLKTQNVFLTRT--NIIKVGDLGIARVLE 153 (257)
T ss_pred HHHHHHHhCCeeccCCCchhEEEecC--CcEEEecccceEEec
Confidence 788999999999999999999865 899999999987664
No 233
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.21 E-value=6.7e-11 Score=126.96 Aligned_cols=143 Identities=17% Similarity=0.146 Sum_probs=95.4
Q ss_pred ccccccccceeeEEEEecC----CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 10 ETPLATASIAQVHRATLVD----GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~~----G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
.+.||.|++|.||+|+..+ ...|+||+.+........ -.+
T Consensus 11 ~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~------------------------------------~~~ 54 (270)
T cd05056 11 GRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVR------------------------------------EKF 54 (270)
T ss_pred eeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHH------------------------------------HHH
Confidence 3689999999999999753 246899976543321100 013
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
.+|+..+.++.+. .-+.+..+......+++|||++|.+|.++........+...+...+.+++
T Consensus 55 ~~e~~~l~~~~h~-----------------~i~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~ 117 (270)
T cd05056 55 LQEAYIMRQFDHP-----------------HIVKLIGVITENPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLS 117 (270)
T ss_pred HHHHHHHHhCCCC-----------------chhceeEEEcCCCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHH
Confidence 4455555554221 01222222235667899999999999887643333345555444444433
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 118 ~~l~~lH~~~~~H~dl~p~nili~~~--~~~~l~d~g~~~~~~~ 159 (270)
T cd05056 118 TALAYLESKRFVHRDIAARNVLVSSP--DCVKLGDFGLSRYLED 159 (270)
T ss_pred HHHHHHHhCCeeccccChheEEEecC--CCeEEccCceeeeccc
Confidence 778899999999999999999865 8999999999877654
No 234
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.21 E-value=5.1e-11 Score=129.39 Aligned_cols=142 Identities=19% Similarity=0.208 Sum_probs=93.8
Q ss_pred cccccccceeeEEEEec----CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHH
Q 002927 11 TPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 86 (864)
Q Consensus 11 ~plasaSigqV~~A~l~----~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 86 (864)
+.|+.|++|.||+|+.. +|+.||+|+.+......-. ...+ .+.
T Consensus 6 ~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~---------------------------~~~~------~~~ 52 (290)
T cd05613 6 KVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKA---------------------------KTTE------HTR 52 (290)
T ss_pred eeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcc---------------------------hHHH------HHH
Confidence 56999999999999963 7899999986532110000 0000 122
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH
Q 002927 87 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 162 (864)
Q Consensus 87 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~ 162 (864)
.|.+.+.++.+ + ..|+.++ . ....++||||++|.+|.+.... ........+...+.
T Consensus 53 ~e~~~l~~l~~-----------------~--~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~ 112 (290)
T cd05613 53 TERQVLEHIRQ-----------------S--PFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQ-RERFKEQEVQIYSG 112 (290)
T ss_pred HHHHHHHhccc-----------------C--CChhceeeEeecCCeEEEEEecCCCCcHHHHHHH-cCCCCHHHHHHHHH
Confidence 34444444432 1 1122222 2 3456799999999999877542 23345555554443
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+++ +..+|..|++|+|++|.||+++.+ ++++|+|||++..+..
T Consensus 113 qi~~al~~lH~~~i~H~dl~p~nil~~~~--~~~kl~dfg~~~~~~~ 157 (290)
T cd05613 113 EIVLALEHLHKLGIIYRDIKLENILLDSN--GHVVLTDFGLSKEFHE 157 (290)
T ss_pred HHHHHHHHHHhCCeeccCCCHHHeEECCC--CCEEEeeCccceeccc
Confidence 433 788999999999999999999865 8999999999887654
No 235
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.21 E-value=8.8e-11 Score=124.82 Aligned_cols=141 Identities=16% Similarity=0.183 Sum_probs=94.4
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|+||+++.. +|+.||+|..+........ + ++..|.
T Consensus 6 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~---~---------------------------------~~~~e~ 49 (255)
T cd08219 6 RVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAV---E---------------------------------DSRKEA 49 (255)
T ss_pred EEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHH---H---------------------------------HHHHHH
Confidence 67999999999999976 7999999986522111000 0 122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHHH-
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~~- 165 (864)
..+.++.+ ++ +.+...+. ....+++|||++|.+|.+...... .......+...+.+++
T Consensus 50 ~~l~~l~h------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~ 111 (255)
T cd08219 50 VLLAKMKH------------------PNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCL 111 (255)
T ss_pred HHHHhCCC------------------CCcceEEEEEEECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHH
Confidence 43333321 11 22223333 566889999999999877653222 2244555544444443
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 112 al~~lH~~~i~H~dl~p~nili~~~--~~~~l~dfg~~~~~~~ 152 (255)
T cd08219 112 GVQHIHEKRVLHRDIKSKNIFLTQN--GKVKLGDFGSARLLTS 152 (255)
T ss_pred HHHHHhhCCcccCCCCcceEEECCC--CcEEEcccCcceeecc
Confidence 788999999999999999999865 8999999999876654
No 236
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.21 E-value=3.9e-11 Score=127.65 Aligned_cols=77 Identities=21% Similarity=0.277 Sum_probs=58.9
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
....+++|||++|.+|.++.... ...+...+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++.
T Consensus 65 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~--~~~~l~dfg~~~ 141 (265)
T cd05579 65 KKNLYLVMEYLPGGDLASLLENV-GSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSN--GHLKLTDFGLSK 141 (265)
T ss_pred CcEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCC--CCEEEEecccch
Confidence 34568999999999998775422 2345555554444444 778899999999999999999865 899999999876
Q ss_pred cc
Q 002927 204 KL 205 (864)
Q Consensus 204 ~l 205 (864)
..
T Consensus 142 ~~ 143 (265)
T cd05579 142 VG 143 (265)
T ss_pred hc
Confidence 54
No 237
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.21 E-value=5e-11 Score=130.24 Aligned_cols=137 Identities=15% Similarity=0.200 Sum_probs=94.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|.||+|+.. +|+.||||.......... -.+.+|.
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~-------------------------------------~~~~~e~ 67 (297)
T cd06656 25 EKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKK-------------------------------------ELIINEI 67 (297)
T ss_pred eeeccCCCeEEEEEEECCCCCEEEEEEEecCccchH-------------------------------------HHHHHHH
Confidence 56999999999999975 899999997643211100 0023344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..+..+. +++ +.+++ . ....++||||++|.+|.++.. ........+...+.+++
T Consensus 68 ~~l~~~~------------------h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~l~ 125 (297)
T cd06656 68 LVMRENK------------------NPN--IVNYLDSYLVGDELWVVMEYLAGGSLTDVVT--ETCMDEGQIAAVCRECL 125 (297)
T ss_pred HHHHhCC------------------CCC--EeeEEEEEecCCEEEEeecccCCCCHHHHHH--hCCCCHHHHHHHHHHHH
Confidence 4333322 122 22232 2 456889999999999988743 33345555555444443
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+..+|..|++|+|+||.|||++.+ +.++|+|||++..+.+.
T Consensus 126 ~~L~~LH~~~i~H~dL~p~Nili~~~--~~~~l~Dfg~~~~~~~~ 168 (297)
T cd06656 126 QALDFLHSNQVIHRDIKSDNILLGMD--GSVKLTDFGFCAQITPE 168 (297)
T ss_pred HHHHHHHHCCcccCCCCHHHEEECCC--CCEEECcCccceEccCC
Confidence 778899999999999999999865 89999999998776543
No 238
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.21 E-value=6.8e-11 Score=129.48 Aligned_cols=143 Identities=17% Similarity=0.222 Sum_probs=92.4
Q ss_pred ccccccccceeeEEEEec--------CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHh
Q 002927 10 ETPLATASIAQVHRATLV--------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPK 81 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~--------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~ 81 (864)
.++||+|++|.||+|+.. ++..||||+.+......-..
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~---------------------------------- 65 (304)
T cd05101 20 GKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLS---------------------------------- 65 (304)
T ss_pred cceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHH----------------------------------
Confidence 378999999999999741 35689999876443211000
Q ss_pred hccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhc---------
Q 002927 82 ELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAF--------- 150 (864)
Q Consensus 82 Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~--------- 150 (864)
++.+|...+.++.. ++. +.+...+. ....+|+|||++|.+|.++......
T Consensus 66 --~~~~E~~~l~~l~~-----------------h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 126 (304)
T cd05101 66 --DLVSEMEMMKMIGK-----------------HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDI 126 (304)
T ss_pred --HHHHHHHHHHhhcc-----------------CCCchheeEEEecCCceEEEEecCCCCcHHHHHHhcCCccccccccc
Confidence 13334444444421 111 11222222 4557899999999999887543211
Q ss_pred ------CCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 151 ------GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 151 ------~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
.+....+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 127 ~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~~--~~~kl~D~g~~~~~~~ 189 (304)
T cd05101 127 ARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTEN--NVMKIADFGLARDVNN 189 (304)
T ss_pred ccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcCC--CcEEECCCccceeccc
Confidence 123333444333333 778999999999999999999865 8999999999887643
No 239
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.21 E-value=1e-10 Score=125.47 Aligned_cols=138 Identities=14% Similarity=0.111 Sum_probs=94.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
..||.|++|.||+|+.. +++.|+||.......... -.+.+|+
T Consensus 14 ~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~-------------------------------------~~~~~e~ 56 (268)
T cd06624 14 VVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYV-------------------------------------QPLHEEI 56 (268)
T ss_pred EEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHH-------------------------------------HHHHHHH
Confidence 68999999999999965 788999997654432210 0134455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCC--CHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGV--NKQKVVEEITR 163 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~--~~~~l~~~~~~ 163 (864)
+.+.++++ +. |.+++. ....+++|||++|.+|.++........ +...+...+.+
T Consensus 57 ~~l~~l~h------------------~~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~q 116 (268)
T cd06624 57 ALHSYLKH------------------RN--IVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQ 116 (268)
T ss_pred HHHHhcCC------------------CC--eeeeeeeeccCCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHH
Confidence 55555432 11 222322 456789999999999988754322222 44444443333
Q ss_pred HH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 164 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 164 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+. +..+|..|++|+|+||.||+++.+ ++.++|+|||++..+.
T Consensus 117 i~~al~~lH~~~i~h~dl~p~nil~~~~-~~~~~l~dfg~~~~~~ 160 (268)
T cd06624 117 ILEGLKYLHDNQIVHRDIKGDNVLVNTY-SGVVKISDFGTSKRLA 160 (268)
T ss_pred HHHHHHHHHHCCEeecCCCHHHEEEcCC-CCeEEEecchhheecc
Confidence 33 778899999999999999999753 4789999999887653
No 240
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.21 E-value=7.5e-11 Score=127.61 Aligned_cols=137 Identities=17% Similarity=0.162 Sum_probs=95.0
Q ss_pred cccccccceeeEEEEe-----cCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 11 TPLATASIAQVHRATL-----VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 11 ~plasaSigqV~~A~l-----~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
+.||.|++|+||+++. .+++.||||+.+....... +-.|
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------~~~~ 53 (283)
T cd05080 10 RVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQN------------------------------------TSGW 53 (283)
T ss_pred eecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHH------------------------------------HHHH
Confidence 6799999999988653 2688999998765422110 0113
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe------cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHH
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVE 159 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~ 159 (864)
.+|++.+.++.+ +. +++++. ....+++|||++|.+|.++.. ....+...+..
T Consensus 54 ~~E~~~l~~l~h------------------~~--i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~--~~~l~~~~~~~ 111 (283)
T cd05080 54 KKEINILKTLYH------------------EN--IVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLP--KHKLNLAQLLL 111 (283)
T ss_pred HHHHHHHHhCCC------------------CC--EeeEEEEEecCCCceEEEEecCCCCCCHHHHHH--HcCCCHHHHHH
Confidence 445555555422 22 223322 123679999999999988753 33466666666
Q ss_pred HHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 160 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 160 ~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
.+.+++ +..+|..|++|+|+||.||+++.+ +.++|.|||++..+..
T Consensus 112 i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~--~~~~l~dfg~~~~~~~ 159 (283)
T cd05080 112 FAQQICEGMAYLHSQHYIHRDLAARNVLLDND--RLVKIGDFGLAKAVPE 159 (283)
T ss_pred HHHHHHHHHHHHHHCCeeccccChheEEEcCC--CcEEEeecccccccCC
Confidence 555544 788999999999999999999865 8899999999876653
No 241
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.21 E-value=7.8e-11 Score=129.45 Aligned_cols=140 Identities=19% Similarity=0.156 Sum_probs=94.1
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.. +|+.||+|+.+........ . ++.+|+
T Consensus 7 ~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~------------------------------~------~~~~E~ 50 (308)
T cd06615 7 GELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIR------------------------------N------QIIREL 50 (308)
T ss_pred eeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHH------------------------------H------HHHHHH
Confidence 67999999999999976 7899999987644321110 0 133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
+.+.++.+. .-+.+...+. ....+|+|||++|.+|.++.... ..+....+...+.+++ +
T Consensus 51 ~~l~~l~h~-----------------~iv~~~~~~~~~~~~~lv~ey~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l 112 (308)
T cd06615 51 KVLHECNSP-----------------YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA-GRIPENILGKISIAVLRGL 112 (308)
T ss_pred HHHHhCCCC-----------------CCCeEEEEEeeCCEEEEEeeccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHH
Confidence 555554321 1122333333 56678999999999998875422 2334443333333333 6
Q ss_pred HHHHh-cCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 167 HQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 167 ~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..+|. .|++|+|++|.||+++.+ +.++|+|||++..+.
T Consensus 113 ~~lH~~~~i~H~dl~p~nil~~~~--~~~~l~dfg~~~~~~ 151 (308)
T cd06615 113 TYLREKHKIMHRDVKPSNILVNSR--GEIKLCDFGVSGQLI 151 (308)
T ss_pred HHHHhhCCEEECCCChHHEEEecC--CcEEEccCCCccccc
Confidence 77886 699999999999999865 889999999886553
No 242
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.21 E-value=6.7e-11 Score=129.15 Aligned_cols=138 Identities=19% Similarity=0.199 Sum_probs=91.1
Q ss_pred ccccccccceeeEEEEec-CCC--EEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHH
Q 002927 10 ETPLATASIAQVHRATLV-DGR--QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 86 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-~G~--~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 86 (864)
.+.||.|++|+||+|+++ +|. .|++|+.+....... .-+|.
T Consensus 7 ~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~------------------------------------~~~~~ 50 (297)
T cd05089 7 EDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASEND------------------------------------HRDFA 50 (297)
T ss_pred eeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHH------------------------------------HHHHH
Confidence 368999999999999976 454 478887553221110 01244
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhh-------------
Q 002927 87 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA------------- 149 (864)
Q Consensus 87 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~------------- 149 (864)
+|...+.++.+ ++ .+.+++. ....+++|||+++.+|.++.....
T Consensus 51 ~E~~~l~~l~~-----------------hp--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 111 (297)
T cd05089 51 GELEVLCKLGH-----------------HP--NIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHG 111 (297)
T ss_pred HHHHHHHhhcC-----------------CC--chhheEEEEccCCcceEEEEecCCCcHHHHHHhccccccccccccccC
Confidence 56666655521 11 1223322 456789999999999987753211
Q ss_pred --cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 150 --FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 150 --~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
.......+...+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||++..
T Consensus 112 ~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~--~~~kl~dfg~~~~ 168 (297)
T cd05089 112 TASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGEN--LASKIADFGLSRG 168 (297)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCC--CeEEECCcCCCcc
Confidence 1133344444444443 788999999999999999999865 8899999998753
No 243
>PTZ00284 protein kinase; Provisional
Probab=99.21 E-value=4e-11 Score=139.78 Aligned_cols=142 Identities=16% Similarity=0.091 Sum_probs=85.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|.||+|+.. +++.||||+.+.... ... . +..|.
T Consensus 135 ~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~--~~~------------------------------~------~~~e~ 176 (467)
T PTZ00284 135 SLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPK--YTR------------------------------D------AKIEI 176 (467)
T ss_pred EEEEeccCEEEEEEEEcCCCeEEEEEEEecchh--hHH------------------------------H------HHHHH
Confidence 57999999999999975 789999998753110 000 0 11122
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCC-CCEEEeeEEe--cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH-
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYE-VDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~-~~v~vP~v~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~- 165 (864)
..++++++.-. ... ..+.+...+. ....+||||++ |..|.++.. ....+....+...+.+++
T Consensus 177 ~~l~~l~~~~~------------~~~~~i~~i~~~~~~~~~~~~iv~~~~-g~~l~~~l~-~~~~l~~~~~~~i~~qi~~ 242 (467)
T PTZ00284 177 QFMEKVRQADP------------ADRFPLMKIQRYFQNETGHMCIVMPKY-GPCLLDWIM-KHGPFSHRHLAQIIFQTGV 242 (467)
T ss_pred HHHHHHhhcCc------------ccCcceeeeEEEEEcCCceEEEEEecc-CCCHHHHHH-HcCCCCHHHHHHHHHHHHH
Confidence 23333322100 001 1122223332 34578999988 555555432 222345555555444443
Q ss_pred -HHHHHh-cCeeccCCCCCCeEEccCC--------------CCceEEEecccccc
Q 002927 166 -AHQIYV-DGFFNGDPHPGNFLVSKDP--------------PHRPILLDFGLTKK 204 (864)
Q Consensus 166 -l~~i~~-~G~~H~D~hPgNIlv~~~~--------------~g~i~LiDFG~~~~ 204 (864)
+..+|. .||+||||||+|||++.++ .++++|+|||.+..
T Consensus 243 aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~ 297 (467)
T PTZ00284 243 ALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCD 297 (467)
T ss_pred HHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCcccc
Confidence 788997 5999999999999998541 12599999997653
No 244
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.21 E-value=1.2e-10 Score=123.11 Aligned_cols=146 Identities=14% Similarity=0.168 Sum_probs=95.0
Q ss_pred cccc-cccceeeEEEEecCCCEEEEEEe-cCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 11 TPLA-TASIAQVHRATLVDGRQVVVKVQ-HQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 11 ~pla-saSigqV~~A~l~~G~~VAVKv~-~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
..|| .|+.|.||+... +|+.+|||.- ++++...+..+- +.. .....-.+.+|
T Consensus 37 ~~lg~~~g~gtv~~v~~-~~~~~vlk~~~r~~~i~kv~~~~----------------~~~---------~~~~~~r~~rE 90 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQT-PGVNWVLRHYRRGGLIGKLSKDR----------------YLF---------TGLERTRAFAE 90 (239)
T ss_pred ceeecCCCCccEEEEEe-CCceEEEEEeeEcchHHhhhhhc----------------ccc---------cchhhhHHHHH
Confidence 4576 899999999987 5889999975 344432221110 000 00112235667
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-----cC---CceEEEeecCC-cCCCChHHHhhcCCCHHHHHH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-----SS---ETVLILEFMDG-IRLNDCESLEAFGVNKQKVVE 159 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-----~~---~~vLvmE~i~G-~~L~~~~~~~~~~~~~~~l~~ 159 (864)
.+.+.++++. ++.+|+++. .. +.+|+|||++| .+|.++.. ....+. +...
T Consensus 91 ~~ll~~L~~~------------------gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~--~~~l~~-~~~~ 149 (239)
T PRK01723 91 FRLLAQLYEA------------------GLPVPRPIAARVVRHGLFYRADILIERIEGARDLVALLQ--EAPLSE-EQWQ 149 (239)
T ss_pred HHHHHHHHhC------------------CCCCceeEeeeeeecCcceeeeEEEEecCCCCCHHHHHh--cCCCCH-HHHH
Confidence 8888887652 344565543 11 23599999998 67766532 222333 3344
Q ss_pred HHHHHHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 160 EITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 160 ~~~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.+++ .+..+|..|++|+|+||+|||++.+ ++++|||||.+..-.
T Consensus 150 ~i~~-~l~~lH~~GI~HrDlkp~NILv~~~--~~v~LIDfg~~~~~~ 193 (239)
T PRK01723 150 AIGQ-LIARFHDAGVYHADLNAHNILLDPD--GKFWLIDFDRGELRT 193 (239)
T ss_pred HHHH-HHHHHHHCCCCCCCCCchhEEEcCC--CCEEEEECCCcccCC
Confidence 4443 4889999999999999999999864 789999999887655
No 245
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.21 E-value=7.9e-11 Score=127.43 Aligned_cols=138 Identities=17% Similarity=0.221 Sum_probs=90.7
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|.||+|+.+ +|+.||||+.++.... .. ++..|.
T Consensus 24 ~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~--~~------------------------------------~~~~e~ 65 (286)
T cd06638 24 ETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDI--DE------------------------------------EIEAEY 65 (286)
T ss_pred eeeccCCCcEEEEEEECCCCceeEEEeeccccch--HH------------------------------------HHHHHH
Confidence 68999999999999976 7899999986542110 00 122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---------cCCceEEEeecCCcCCCChHHHh---hcCCCHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---------SSETVLILEFMDGIRLNDCESLE---AFGVNKQKV 157 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---------~~~~vLvmE~i~G~~L~~~~~~~---~~~~~~~~l 157 (864)
+.+.++.+ ++ .+++++. ....+|+|||++|.+|.++.... ....+...+
T Consensus 66 ~~l~~l~~-----------------h~--~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 126 (286)
T cd06638 66 NILKALSD-----------------HP--NVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPII 126 (286)
T ss_pred HHHHHHhc-----------------CC--CeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHH
Confidence 44444421 11 1222221 23468999999999998764311 112333333
Q ss_pred HHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 158 VEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 158 ~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
...+.+++ +..+|..|++|+|+||+||+++.+ +.++|+|||++..+..
T Consensus 127 ~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~--~~~kl~dfg~~~~~~~ 176 (286)
T cd06638 127 AYILHEALMGLQHLHVNKTIHRDVKGNNILLTTE--GGVKLVDFGVSAQLTS 176 (286)
T ss_pred HHHHHHHHHHHHHHHhCCccccCCCHHhEEECCC--CCEEEccCCceeeccc
Confidence 33333322 678899999999999999999865 7899999999877643
No 246
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.20 E-value=5e-11 Score=128.78 Aligned_cols=137 Identities=18% Similarity=0.193 Sum_probs=93.7
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|+.|++|+||+|+.. +|+.||||+.+....... .-.+.+|+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~------------------------------------~~~~~~E~ 49 (284)
T cd07836 6 EKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGT------------------------------------PSTAIREI 49 (284)
T ss_pred eeeccCCceEEEEEEECCCCeEEEEEEecccccccc------------------------------------hHHHHHHH
Confidence 67999999999999986 799999998764321100 00123355
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhh--cCCCHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA--FGVNKQKVVEEITR 163 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~--~~~~~~~l~~~~~~ 163 (864)
..+.++.+ + .+++++. ....+|||||++| +|.++..... ..++...+...+.+
T Consensus 50 ~~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~q 108 (284)
T cd07836 50 SLMKELKH------------------E--NIVRLHDVIHTENKLMLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQ 108 (284)
T ss_pred HHHHhhcC------------------C--CEeeeeeeEeeCCcEEEEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHH
Confidence 55555532 1 2334432 4567999999997 5655433211 23455555555555
Q ss_pred HH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 164 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 164 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
++ +..+|..|++|+|++|.||+++++ +.++|+|||++..+.
T Consensus 109 i~~~l~~lH~~~i~h~dl~p~ni~~~~~--~~~~l~d~g~~~~~~ 151 (284)
T cd07836 109 LLKGIAFCHENRVLHRDLKPQNLLINKR--GELKLADFGLARAFG 151 (284)
T ss_pred HHHHHHHHHHCCeeeCCCCHHHEEECCC--CcEEEeecchhhhhc
Confidence 44 778899999999999999999865 899999999887553
No 247
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.20 E-value=5.5e-11 Score=129.69 Aligned_cols=79 Identities=23% Similarity=0.259 Sum_probs=58.8
Q ss_pred cCCceEEEeecCCcCCCChHHHhhc----------CCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAF----------GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHR 193 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~----------~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~ 193 (864)
....+++|||++|.+|.++...... ..+...+...+.++. +..+|..|++|+|+||.||+++.+ +.
T Consensus 91 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~~~--~~ 168 (296)
T cd05095 91 SDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVGKN--YT 168 (296)
T ss_pred CCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEEcCC--CC
Confidence 4567899999999999877542211 122334444444433 788999999999999999999865 89
Q ss_pred eEEEecccccccC
Q 002927 194 PILLDFGLTKKLS 206 (864)
Q Consensus 194 i~LiDFG~~~~l~ 206 (864)
++|+|||++..+.
T Consensus 169 ~~l~dfg~~~~~~ 181 (296)
T cd05095 169 IKIADFGMSRNLY 181 (296)
T ss_pred EEeccCccccccc
Confidence 9999999987653
No 248
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.20 E-value=1.1e-10 Score=124.20 Aligned_cols=138 Identities=17% Similarity=0.174 Sum_probs=94.1
Q ss_pred ccccccceeeEEEEec--C--CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHH
Q 002927 12 PLATASIAQVHRATLV--D--GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 87 (864)
Q Consensus 12 plasaSigqV~~A~l~--~--G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~ 87 (864)
-||.|++|+||+|+.. + +..||+|+.+...... .+-++.+
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~------------------------------------~~~~~~~ 45 (257)
T cd05060 2 ELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAA------------------------------------GKKEFLR 45 (257)
T ss_pred ccCccCceeEEEeEeeccCCCcceEEEEecccccchH------------------------------------HHHHHHH
Confidence 4899999999999864 2 3789999876443210 0112334
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH-
Q 002927 88 EAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 88 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~- 165 (864)
|.+.+.++.+ +. +.+..+......+++|||++|.+|.++.... .......+...+.+++
T Consensus 46 e~~~l~~l~h------------------~~iv~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~ 106 (257)
T cd05060 46 EASVMAQLDH------------------PCIVRLIGVCKGEPLMLVMELAPLGPLLKYLKKR-REIPVSDLKELAHQVAM 106 (257)
T ss_pred HHHHHHhcCC------------------CCeeeEEEEEcCCceEEEEEeCCCCcHHHHHHhC-CCCCHHHHHHHHHHHHH
Confidence 5544444321 11 2222222355678999999999998875422 2355555555555554
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+.
T Consensus 107 ~l~~lh~~~i~H~di~p~nili~~~--~~~kl~df~~~~~~~ 146 (257)
T cd05060 107 GMAYLESKHFVHRDLAARNVLLVNR--HQAKISDFGMSRALG 146 (257)
T ss_pred HHHHHhhcCeeccCcccceEEEcCC--CcEEeccccccceee
Confidence 778899999999999999999865 899999999987664
No 249
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.20 E-value=6.7e-11 Score=140.18 Aligned_cols=80 Identities=19% Similarity=0.296 Sum_probs=54.9
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCC------------------HHHHH-HHHHHH--HHHHHHhcCeeccCCCCCCe
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVN------------------KQKVV-EEITRA--YAHQIYVDGFFNGDPHPGNF 184 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~------------------~~~l~-~~~~~~--~l~~i~~~G~~H~D~hPgNI 184 (864)
....+|||||+++.+|.++......... ...++ ..+.++ .+.++|..||+|||+||.||
T Consensus 207 ~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NI 286 (566)
T PLN03225 207 EDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNI 286 (566)
T ss_pred CCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHE
Confidence 3456899999999999877542211000 01111 122222 27789999999999999999
Q ss_pred EEccCCCCceEEEecccccccC
Q 002927 185 LVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 185 lv~~~~~g~i~LiDFG~~~~l~ 206 (864)
|++.+ ++.++|+|||+++.+.
T Consensus 287 Ll~~~-~~~~KL~DFGlA~~l~ 307 (566)
T PLN03225 287 IFSEG-SGSFKIIDLGAAADLR 307 (566)
T ss_pred EEeCC-CCcEEEEeCCCccccc
Confidence 99853 4789999999987553
No 250
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.20 E-value=1.1e-10 Score=124.25 Aligned_cols=138 Identities=20% Similarity=0.211 Sum_probs=94.4
Q ss_pred ccccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 10 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
.+.||+|++|.||+|.. .|+.||||..+.... . . + .+.+|.
T Consensus 11 ~~~ig~g~~g~v~~~~~-~~~~v~iK~~~~~~~-~----~---------------------------~------~~~~e~ 51 (256)
T cd05039 11 GATIGKGEFGDVMLGDY-RGQKVAVKCLKDDST-A----A---------------------------Q------AFLAEA 51 (256)
T ss_pred eeeeecCCCceEEEEEe-cCcEEEEEEeccchh-H----H---------------------------H------HHHHHH
Confidence 36799999999999996 589999998754322 0 0 0 123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhc-CCCHHHHHHHHHHHH-
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAF-GVNKQKVVEEITRAY- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~-~~~~~~l~~~~~~~~- 165 (864)
..+.++.+ +. +.+...+. ....+++|||++|.+|.++...... ......+...+.+++
T Consensus 52 ~~l~~l~~------------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~ 113 (256)
T cd05039 52 SVMTTLRH------------------PNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCE 113 (256)
T ss_pred HHHHhcCC------------------cceeeeEEEEcCCCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHH
Confidence 44444322 11 22222222 5678899999999999887543221 244445544444443
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|+|+||+||+++.+ +.++|+|||.+....
T Consensus 114 ~l~~lh~~~i~H~di~p~Nili~~~--~~~~l~d~g~~~~~~ 153 (256)
T cd05039 114 GMEYLEEKNFVHRDLAARNVLVSED--LVAKVSDFGLAKEAS 153 (256)
T ss_pred HHHHHHhCCccchhcccceEEEeCC--CCEEEcccccccccc
Confidence 778999999999999999999865 899999999988764
No 251
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.20 E-value=1.1e-10 Score=124.92 Aligned_cols=145 Identities=15% Similarity=0.128 Sum_probs=95.1
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
..|+.|++|+||+|... +++.||||+.+..-...... ....++.+ ++.+|+
T Consensus 6 ~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~----------------------~~~~~~~~------~~~~e~ 57 (267)
T cd06628 6 ALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSK----------------------DRKRSMLD------ALAREI 57 (267)
T ss_pred ceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchh----------------------HHHHHHHH------HHHHHH
Confidence 67999999999999975 78999999865432111000 00011111 234455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..+.++.+ + .+++++. ....+++|||++|.+|.++.... ...+...+...+.+++
T Consensus 58 ~~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~ 116 (267)
T cd06628 58 ALLKELQH------------------E--NIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNY-GAFEETLVRNFVRQIL 116 (267)
T ss_pred HHHHhcCC------------------C--CeeeEEEEEEeCCccEEEEEecCCCCHHHHHHhc-cCccHHHHHHHHHHHH
Confidence 55555432 1 2333332 56678999999999998775422 2234434333333333
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|+|++|.||+++++ +.++|+|||++..+.
T Consensus 117 ~~l~~lH~~~ivH~di~p~nil~~~~--~~~~l~dfg~~~~~~ 157 (267)
T cd06628 117 KGLNYLHNRGIIHRDIKGANILVDNK--GGIKISDFGISKKLE 157 (267)
T ss_pred HHHHHHHhcCcccccCCHHHEEEcCC--CCEEecccCCCcccc
Confidence 678899999999999999999855 899999999988765
No 252
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.20 E-value=6.9e-11 Score=126.46 Aligned_cols=142 Identities=18% Similarity=0.159 Sum_probs=94.5
Q ss_pred ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 10 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
.+.|+.|++|.||+|+.. +|+.||||..++-.... . ..+.++.+|
T Consensus 7 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~----~------------------------------~~~~~~~~e 52 (267)
T cd08228 7 EKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMD----A------------------------------KARQDCVKE 52 (267)
T ss_pred eeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCC----H------------------------------HHHHHHHHH
Confidence 367999999999999976 89999999754311000 0 011124445
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHh---hcCCCHHHHHHHH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEI 161 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~---~~~~~~~~l~~~~ 161 (864)
.+.+.++.+ + .+++++ . ....+++|||++|.+|.++.... ....+...+...+
T Consensus 53 ~~~l~~l~h------------------~--~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~ 112 (267)
T cd08228 53 IDLLKQLNH------------------P--NVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYF 112 (267)
T ss_pred HHHHHhCCC------------------c--ceeeeeeeEEECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHH
Confidence 554444422 1 222332 2 45678999999999998765321 1123444444444
Q ss_pred HHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 162 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 162 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
.++. +..+|+.|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 113 ~~i~~~l~~LH~~~i~H~dl~~~nil~~~~--~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 113 VQLCSAVEHMHSRRVMHRDIKPANVFITAT--GVVKLGDLGLGRFFSS 158 (267)
T ss_pred HHHHHHHHHHhhCCeeCCCCCHHHEEEcCC--CCEEECccccceeccc
Confidence 3333 678899999999999999999865 8899999999887654
No 253
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.20 E-value=6.3e-11 Score=130.46 Aligned_cols=144 Identities=16% Similarity=0.184 Sum_probs=88.8
Q ss_pred cccccccccccccceeeEEEEec---CCCEEEEEEecCC-hHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhH
Q 002927 5 FMDFVETPLATASIAQVHRATLV---DGRQVVVKVQHQG-IKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAP 80 (864)
Q Consensus 5 F~~fd~~plasaSigqV~~A~l~---~G~~VAVKv~~p~-i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~ 80 (864)
|+.. ...||.|++|.||+|+.+ +++.||||+.+.. ....
T Consensus 2 ~~~~-~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~------------------------------------ 44 (317)
T cd07868 2 FEYE-GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMS------------------------------------ 44 (317)
T ss_pred cccc-ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcHH------------------------------------
Confidence 4433 467999999999999965 5689999976532 1111
Q ss_pred hhccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---cCCceEEEeecCCcCCCChHHHhh--------
Q 002927 81 KELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEA-------- 149 (864)
Q Consensus 81 ~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~~~-------- 149 (864)
..+|++.+.++.+. .-+.+..++. ....+++|||+++ .+.++.....
T Consensus 45 ----~~~E~~~l~~l~h~-----------------niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~ 102 (317)
T cd07868 45 ----ACREIALLRELKHP-----------------NVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKP 102 (317)
T ss_pred ----HHHHHHHHHhcCCC-----------------CCcceeeeEecCCCcEEEEEEeccCC-CHHHHHHhcccccccCCc
Confidence 22355555544321 1122333332 2335799999976 4444432111
Q ss_pred cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccC--CCCceEEEecccccccCh
Q 002927 150 FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKD--PPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 150 ~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~--~~g~i~LiDFG~~~~l~~ 207 (864)
..+....+...+.+++ +..+|+.|++|||+||.|||+..+ .++.++|+|||++..++.
T Consensus 103 ~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~ 164 (317)
T cd07868 103 VQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS 164 (317)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCC
Confidence 1233333333333333 778899999999999999999532 247899999999876543
No 254
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.20 E-value=8.8e-11 Score=126.62 Aligned_cols=138 Identities=17% Similarity=0.217 Sum_probs=90.9
Q ss_pred cccccccceeeEEEEec------CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 11 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 11 ~plasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
+.||.|++|+||+|+.+ +++.||||+.+...... ...+
T Consensus 12 ~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~------------------------------------~~~~ 55 (277)
T cd05062 12 RELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMR------------------------------------ERIE 55 (277)
T ss_pred eeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHH------------------------------------HHHH
Confidence 67999999999999853 35789999765322110 0011
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhc---------C
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAF---------G 151 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~---------~ 151 (864)
|.+|+..+.++++ +. |.+++. .+..++||||++|.+|.++...... .
T Consensus 56 ~~~e~~~l~~l~~------------------~~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~ 115 (277)
T cd05062 56 FLNEASVMKEFNC------------------HH--VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAP 115 (277)
T ss_pred HHHHHHHHHhCCC------------------CC--eeeEEEEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccC
Confidence 3445544443321 12 233332 4668899999999999887542111 1
Q ss_pred CCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 152 VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 152 ~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.+...+...+.+++ +..+|..|++|+|+||.||+++++ +.++|+|||++..+.
T Consensus 116 ~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~--~~~~l~dfg~~~~~~ 170 (277)
T cd05062 116 PSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED--FTVKIGDFGMTRDIY 170 (277)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCC--CCEEECCCCCccccC
Confidence 23334444433333 778999999999999999999965 899999999987653
No 255
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.20 E-value=7.3e-11 Score=129.47 Aligned_cols=141 Identities=19% Similarity=0.237 Sum_probs=94.0
Q ss_pred cccccccceeeEEEEec--------CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhh
Q 002927 11 TPLATASIAQVHRATLV--------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKE 82 (864)
Q Consensus 11 ~plasaSigqV~~A~l~--------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~E 82 (864)
++||+|++|.||+|+.. ++..||+|+.++..... +.
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~---~~--------------------------------- 67 (307)
T cd05098 24 KPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEK---DL--------------------------------- 67 (307)
T ss_pred eeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChH---HH---------------------------------
Confidence 78999999999999852 23579999887653211 00
Q ss_pred ccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhh-----------
Q 002927 83 LDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA----------- 149 (864)
Q Consensus 83 ld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~----------- 149 (864)
-++..|...+.++.. ++. +.+...+. ....+++|||++|.+|.++.....
T Consensus 68 ~~~~~e~~~l~~l~~-----------------h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~ 130 (307)
T cd05098 68 SDLISEMEMMKMIGK-----------------HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPT 130 (307)
T ss_pred HHHHHHHHHHHHhcC-----------------CCCEeeEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccc
Confidence 013334444444421 111 22222222 456889999999999988764321
Q ss_pred ----cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 150 ----FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 150 ----~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.......+...+.+++ +..+|+.|++|+|+||.||+++.+ +.++|+|||.+..+.
T Consensus 131 ~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~--~~~kL~dfg~a~~~~ 191 (307)
T cd05098 131 QVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED--NVMKIADFGLARDIH 191 (307)
T ss_pred cCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcCC--CcEEECCCccccccc
Confidence 1234444555555444 788999999999999999999865 899999999987654
No 256
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.20 E-value=1e-10 Score=127.10 Aligned_cols=140 Identities=16% Similarity=0.206 Sum_probs=92.7
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|.||+|+.+ +|+.||||+..+.-.. . . .+.+|.
T Consensus 28 ~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~--~------------------------------~------~~~~e~ 69 (291)
T cd06639 28 ETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDV--D------------------------------E------EIEAEY 69 (291)
T ss_pred EEeecCCCeEEEEEEECCCCCEEEEEEecccccH--H------------------------------H------HHHHHH
Confidence 57999999999999975 7999999987542110 0 0 022344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe------cCCceEEEeecCCcCCCChHHH---hhcCCCHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ------SSETVLILEFMDGIRLNDCESL---EAFGVNKQKVVE 159 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~------~~~~vLvmE~i~G~~L~~~~~~---~~~~~~~~~l~~ 159 (864)
..+.++.+ +++ +.+...+. ....++||||++|.+|.++... .........+..
T Consensus 70 ~~l~~l~~-----------------h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~ 132 (291)
T cd06639 70 NILQSLPN-----------------HPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISY 132 (291)
T ss_pred HHHHHhcC-----------------CCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHH
Confidence 44444321 111 12222221 1357899999999999886532 112334444444
Q ss_pred HHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 160 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 160 ~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
.+.+++ ++.+|..|++|+|+||+||+++.+ ++++|+|||++..+..
T Consensus 133 ~~~qi~~al~~lH~~~ivH~dlkp~nili~~~--~~~kl~dfg~~~~~~~ 180 (291)
T cd06639 133 ILYGALLGLQHLHNNRIIHRDVKGNNILLTTE--GGVKLVDFGVSAQLTS 180 (291)
T ss_pred HHHHHHHHHHHHHhCCeeccCCCHHHEEEcCC--CCEEEeecccchhccc
Confidence 444433 788999999999999999999865 8899999999876643
No 257
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.20 E-value=6.2e-11 Score=130.49 Aligned_cols=141 Identities=16% Similarity=0.188 Sum_probs=95.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|.||+|+.. +|+.||||...+...... ... -.+..|.
T Consensus 7 ~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~-~~~---------------------------------~~~~~e~ 52 (316)
T cd05574 7 KLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKR-NKV---------------------------------KRVLTEQ 52 (316)
T ss_pred eeecCCccEEEEEEEEcCCCcEEEEEEEeccccchH-HHH---------------------------------HHHHHHH
Confidence 67999999999999976 699999998765321110 000 0133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRA 164 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~ 164 (864)
+.+.++.+ ..|++++. ....+++|||+.|.+|.++..... ..++...+...+.++
T Consensus 53 ~~l~~l~~--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi 112 (316)
T cd05574 53 EILATLDH--------------------PFLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEV 112 (316)
T ss_pred HHHHhCCC--------------------CCchhheeeeecCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHH
Confidence 54444421 12333332 456789999999999988754221 234444444433343
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+ +..+|..|++|+|+||.||+++.+ +.++|+|||++.....
T Consensus 113 ~~~l~~lH~~~i~H~dlkp~Nili~~~--~~~~l~dfg~~~~~~~ 155 (316)
T cd05574 113 LLALEYLHLLGIVYRDLKPENILLHES--GHIMLSDFDLSKQSDV 155 (316)
T ss_pred HHHHHHHHHCCeeccCCChHHeEEcCC--CCEEEeecchhhcccc
Confidence 3 778899999999999999999865 8999999999876643
No 258
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.20 E-value=6.5e-11 Score=127.71 Aligned_cols=140 Identities=18% Similarity=0.169 Sum_probs=95.1
Q ss_pred cccccccceeeEEEEecC------CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 11 TPLATASIAQVHRATLVD------GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~------G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
+.||.|++|.||+|...+ +..|++|......... .+.+
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~------------------------------------~~~~ 55 (277)
T cd05036 12 RALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQ------------------------------------DESD 55 (277)
T ss_pred eECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHH------------------------------------HHHH
Confidence 689999999999999753 5678999765432211 1223
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhc------CCCH
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAF------GVNK 154 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~------~~~~ 154 (864)
|.+|...+.++.+ + .|.+++. ....+++|||++|.+|.++...... ..+.
T Consensus 56 ~~~e~~~l~~l~~------------------~--~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~ 115 (277)
T cd05036 56 FLMEALIMSKFNH------------------Q--NIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTM 115 (277)
T ss_pred HHHHHHHHHhCCC------------------C--CEeeEEEEEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCH
Confidence 5556655555432 1 2223332 4567899999999999887543221 2444
Q ss_pred HHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCC-CCceEEEecccccccC
Q 002927 155 QKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKKLS 206 (864)
Q Consensus 155 ~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~l~ 206 (864)
..+...+.+++ +..+|..|++|+|+||+||+++.++ +..++|+|||++..+.
T Consensus 116 ~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~ 170 (277)
T cd05036 116 KDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIY 170 (277)
T ss_pred HHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccCccccccC
Confidence 55555554444 7788999999999999999998542 2358999999988763
No 259
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.20 E-value=7.5e-11 Score=126.17 Aligned_cols=140 Identities=19% Similarity=0.160 Sum_probs=93.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|+||+|+.+ +|+.||||.....-.. +.+ ...++.+|.
T Consensus 8 ~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~----~~~------------------------------~~~~~~~e~ 53 (267)
T cd08229 8 KKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLM----DAK------------------------------ARADCIKEI 53 (267)
T ss_pred hhhcccCCeEEEEEeecCCCceEEEEeeeehhhh----hHH------------------------------HHHHHHHHH
Confidence 67999999999999965 8999999965421000 000 011244455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHh---hcCCCHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEIT 162 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~---~~~~~~~~l~~~~~ 162 (864)
+.+..+.+ + .+++++ . ....+++|||++|.+|.++.... ........+...+.
T Consensus 54 ~~l~~~~h------------------~--~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 113 (267)
T cd08229 54 DLLKQLNH------------------P--NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFV 113 (267)
T ss_pred HHHHHccC------------------C--chhhhhheeEeCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHH
Confidence 54444422 1 122222 1 45578999999999998875421 12234444444444
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++..+.
T Consensus 114 ~i~~~l~~LH~~~i~H~dl~p~nili~~~--~~~~l~dfg~~~~~~ 157 (267)
T cd08229 114 QLCSALEHMHSRRVMHRDIKPANVFITAT--GVVKLGDLGLGRFFS 157 (267)
T ss_pred HHHHHHHHHHHCCeecCCCCHHHEEEcCC--CCEEECcchhhhccc
Confidence 443 788999999999999999999864 899999999877654
No 260
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.20 E-value=1e-10 Score=125.48 Aligned_cols=143 Identities=24% Similarity=0.243 Sum_probs=92.5
Q ss_pred cccccccceeeEEEEec-CCC--EEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHH
Q 002927 11 TPLATASIAQVHRATLV-DGR--QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 87 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~--~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~ 87 (864)
+.||+|++|.||+|+.. +++ .||||..+......- +. -++..
T Consensus 5 ~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~--~~---------------------------------~~~~~ 49 (272)
T cd05075 5 KTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRS--EM---------------------------------EDFLS 49 (272)
T ss_pred cccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHH--HH---------------------------------HHHHH
Confidence 56999999999999976 343 699998665432110 00 01344
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE-e------cCCceEEEeecCCcCCCChHHHhh-----cCCCHH
Q 002927 88 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI-Q------SSETVLILEFMDGIRLNDCESLEA-----FGVNKQ 155 (864)
Q Consensus 88 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~-~------~~~~vLvmE~i~G~~L~~~~~~~~-----~~~~~~ 155 (864)
|.+.+.++++. .-+.+.... . ....+++|||++|.+|.++..... ..++..
T Consensus 50 E~~~l~~l~h~-----------------~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~ 112 (272)
T cd05075 50 EAVCMKEFDHP-----------------NVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQ 112 (272)
T ss_pred HHHHHHhCCCC-----------------CcceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHH
Confidence 66665555321 011111111 1 124689999999999887653221 123444
Q ss_pred HHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 156 KVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 156 ~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
.+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||+++.+..
T Consensus 113 ~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~--~~~kl~Dfg~~~~~~~ 164 (272)
T cd05075 113 MLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNEN--MNVCVADFGLSKKIYN 164 (272)
T ss_pred HHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCC--CCEEECCCCcccccCc
Confidence 4444444443 788999999999999999999865 8999999999887643
No 261
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.20 E-value=4.7e-11 Score=129.04 Aligned_cols=138 Identities=16% Similarity=0.107 Sum_probs=91.1
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|.||+|+.+ +|+.||||+.+...... .. .-.+.+|+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-----------------------------~~------~~~~~~e~ 50 (285)
T cd07861 6 EKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEE-----------------------------GV------PSTAIREI 50 (285)
T ss_pred eEecccCceEEEEEEECCCCcEEEEEEeccccccC-----------------------------Cc------hHHHHHHH
Confidence 57999999999999976 79999999865321100 00 00123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhh--cCCCHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEA--FGVNKQKVVEEITR 163 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~--~~~~~~~l~~~~~~ 163 (864)
..+.++.+ ..+.+++ . ....++||||++| .|.++..... ...+...+...+.+
T Consensus 51 ~~l~~l~h--------------------~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~q 109 (285)
T cd07861 51 SLLKELQH--------------------PNIVCLQDVLMQESRLYLIFEFLSM-DLKKYLDSLPKGQYMDAELVKSYLYQ 109 (285)
T ss_pred HHHHhcCC--------------------CCEeeeEEEEeeCCeEEEEEecCCC-CHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence 44444422 1233333 2 5667899999986 5554432211 23455555444444
Q ss_pred HH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 164 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 164 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
++ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 110 i~~~L~~lH~~~i~H~dl~p~nil~~~~--~~~~l~dfg~~~~~~ 152 (285)
T cd07861 110 ILQGILFCHSRRVLHRDLKPQNLLIDNK--GVIKLADFGLARAFG 152 (285)
T ss_pred HHHHHHHHHhCCeeecCCCHHHEEEcCC--CcEEECcccceeecC
Confidence 44 788899999999999999999865 899999999987553
No 262
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.20 E-value=9.7e-11 Score=126.29 Aligned_cols=138 Identities=21% Similarity=0.231 Sum_probs=96.0
Q ss_pred cccccccceeeEEEEec-----CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 11 TPLATASIAQVHRATLV-----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-----~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
+.||.|++|.||+|+.. +++.||||+.++..... .+-+|
T Consensus 10 ~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~------------------------------------~~~~~ 53 (284)
T cd05038 10 KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQ------------------------------------HRSDF 53 (284)
T ss_pred eeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchH------------------------------------HHHHH
Confidence 67999999999999963 47899999877543320 01123
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe------cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHH
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVE 159 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~ 159 (864)
.+|.+.+.++.+ + .+++++. ....+++|||++|.+|.++........+...+..
T Consensus 54 ~~ei~~l~~l~~------------------~--~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~ 113 (284)
T cd05038 54 EREIEILRTLDH------------------E--NIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLL 113 (284)
T ss_pred HHHHHHHHhCCC------------------C--ChheEEeeeecCCCCceEEEEecCCCCCHHHHHHhCccccCHHHHHH
Confidence 445544444322 1 1222221 2246899999999999887643333355555555
Q ss_pred HHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 160 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 160 ~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++..+.
T Consensus 114 ~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~--~~~~l~dfg~~~~~~ 160 (284)
T cd05038 114 FSSQICKGMDYLGSQRYIHRDLAARNILVESE--DLVKISDFGLAKVLP 160 (284)
T ss_pred HHHHHHHHHHHHHhCCeecCCCCHHhEEEcCC--CCEEEcccccccccc
Confidence 444443 778899999999999999999865 899999999998776
No 263
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.19 E-value=1.2e-10 Score=125.06 Aligned_cols=137 Identities=18% Similarity=0.179 Sum_probs=90.7
Q ss_pred cccccccceeeEEEEec-CCC--EEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHH
Q 002927 11 TPLATASIAQVHRATLV-DGR--QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 87 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~--~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~ 87 (864)
+.||.|++|.||+|+++ +|+ .|++|..+........ -++..
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~------------------------------------~~~~~ 44 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH------------------------------------RDFAG 44 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHH------------------------------------HHHHH
Confidence 36899999999999986 555 4688866533211100 12444
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhh--------------
Q 002927 88 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA-------------- 149 (864)
Q Consensus 88 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~-------------- 149 (864)
|...+.++.+ ++ .|.+++. ....+++|||++|.+|.++.....
T Consensus 45 E~~~l~~l~~-----------------h~--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~ 105 (270)
T cd05047 45 ELEVLCKLGH-----------------HP--NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANST 105 (270)
T ss_pred HHHHHHhhcc-----------------CC--CeeeEEEEEecCCCceEEEEeCCCCcHHHHHHhccccccccccccccCC
Confidence 6655555532 11 1223332 456789999999999987753211
Q ss_pred -cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 150 -FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 150 -~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
..+....+...+.++. +..+|..|++|+|++|.||+++.+ +.++|+|||++..
T Consensus 106 ~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~--~~~kl~dfgl~~~ 161 (270)
T cd05047 106 ASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGEN--YVAKIADFGLSRG 161 (270)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCC--CeEEECCCCCccc
Confidence 1133444444444443 788999999999999999999865 8999999998753
No 264
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.19 E-value=6.7e-11 Score=127.82 Aligned_cols=142 Identities=20% Similarity=0.196 Sum_probs=96.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|+.|++|.||+|+.. +|+.||||+.+...... .. +-++.+|.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~-----------------------------~~------~~~~~~e~ 50 (286)
T cd07832 6 GRIGEGAHGIVFKAKDRETGETVALKKVALRRLEG-----------------------------GI------PNQALREI 50 (286)
T ss_pred eecccCCCcEEEEEEECCCCceEEEEEEEcccccc-----------------------------hh------hHHHHHHH
Confidence 56999999999999975 79999999865432100 00 01133444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
..++++++. .-+.+...+. ....++||||+ |.+|.++........+...+...+.+++ +
T Consensus 51 ~~l~~~~~~-----------------~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l 112 (286)
T cd07832 51 KALQACQHP-----------------YVVKLLDVFPHGSGFVLVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGV 112 (286)
T ss_pred HHHHhCCCC-----------------CCcceeeEEecCCeeEEEeccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 444444220 0122222222 55678999999 9999887543334455555555444443 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 113 ~~lH~~~i~H~dl~p~ni~~~~~--~~~~l~dfg~~~~~~~ 151 (286)
T cd07832 113 AYMHANGIMHRDLKPANLLISAD--GVLKIADFGLARLFSE 151 (286)
T ss_pred HHHHHCCeecCCcCHHHEEEcCC--CcEEEeeeeecccccC
Confidence 78899999999999999999865 8999999999887654
No 265
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.19 E-value=1.2e-10 Score=126.06 Aligned_cols=80 Identities=14% Similarity=0.109 Sum_probs=62.4
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
....+++|||++|.+|.++........+...+...+.++. +..+|..|++|+|+||.||+++.+ ++++|+|||+++
T Consensus 80 ~~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~--~~~kl~Dfg~~~ 157 (279)
T cd05111 80 GASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSD--SIVQIADFGVAD 157 (279)
T ss_pred CCccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCC--CcEEEcCCccce
Confidence 4556799999999999988654333455555555544444 778999999999999999999865 899999999988
Q ss_pred ccCh
Q 002927 204 KLSS 207 (864)
Q Consensus 204 ~l~~ 207 (864)
.+.+
T Consensus 158 ~~~~ 161 (279)
T cd05111 158 LLYP 161 (279)
T ss_pred eccC
Confidence 6644
No 266
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.19 E-value=3.1e-11 Score=130.43 Aligned_cols=138 Identities=15% Similarity=0.126 Sum_probs=91.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|+.|++|.||+|+.. +|+.||+|+.+...... ..+.++.+|.
T Consensus 6 ~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~-----------------------------------~~~~~~~~ei 50 (284)
T cd07839 6 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDE-----------------------------------GVPSSALREI 50 (284)
T ss_pred EEecccCCeEEEEEEECCCCcEEEEEEeecccccc-----------------------------------cCccchhHHH
Confidence 56999999999999976 79999999865321100 0011233344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..+.++++ + .+.+++ . ....+++|||++| ++.+.........+...+...+.+++
T Consensus 51 ~~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~ 109 (284)
T cd07839 51 CLLKELKH------------------K--NIVRLYDVLHSDKKLTLVFEYCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLL 109 (284)
T ss_pred HHHHhcCC------------------C--CeeeHHHHhccCCceEEEEecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 44444322 1 122222 1 4567899999986 45444322223355555555555544
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|+|+||+||+++.+ ++++|+|||++..+.
T Consensus 110 ~al~~LH~~~i~H~dl~~~nil~~~~--~~~~l~dfg~~~~~~ 150 (284)
T cd07839 110 KGLAFCHSHNVLHRDLKPQNLLINKN--GELKLADFGLARAFG 150 (284)
T ss_pred HHHHHHHHCCEecCCCCHHHEEEcCC--CcEEECccchhhccC
Confidence 788999999999999999999865 899999999987553
No 267
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.19 E-value=1.1e-10 Score=124.24 Aligned_cols=141 Identities=16% Similarity=0.167 Sum_probs=97.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
++|+.|++|.||+|+.. +++.|+||+........ .+ .+.+|.
T Consensus 9 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~----~~---------------------------------~~~~e~ 51 (262)
T cd06613 9 QRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDD----FE---------------------------------IIQQEI 51 (262)
T ss_pred EEecCCCceEEEEeEecCCCCEEEEEEEEcCchhh----HH---------------------------------HHHHHH
Confidence 67999999999999975 78999999876432211 00 122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
..+.++.+. .-+.+...+. ....+++|||++|.+|.++........+...+...+.+++ +
T Consensus 52 ~~l~~~~h~-----------------~i~~~~~~~~~~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l 114 (262)
T cd06613 52 SMLKECRHP-----------------NIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGL 114 (262)
T ss_pred HHHHhCCCC-----------------ChhceEEEEEeCCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHH
Confidence 444443221 0112222222 4567899999999999987654434566666555555544 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 115 ~~lh~~~i~h~dl~p~ni~i~~~--~~~~l~d~g~~~~~~~ 153 (262)
T cd06613 115 AYLHETGKIHRDIKGANILLTED--GDVKLADFGVSAQLTA 153 (262)
T ss_pred HHHHhCCceecCCChhhEEECCC--CCEEECccccchhhhh
Confidence 78899999999999999999965 8999999999876543
No 268
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.19 E-value=6.8e-11 Score=128.47 Aligned_cols=139 Identities=20% Similarity=0.211 Sum_probs=88.8
Q ss_pred ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 10 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
.+.|++|++|.||+|+.+ +|+.||||+.+....+. .+..+.+|
T Consensus 10 ~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~------------------------------------~~~~~~~e 53 (291)
T cd07870 10 LEKLGEGSYATVYKGISRINGQLVALKVISMKTEEG------------------------------------VPFTAIRE 53 (291)
T ss_pred EEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCC------------------------------------CcHHHHHH
Confidence 367999999999999975 79999999865322110 01123345
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCE-EEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH-
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v-~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~- 165 (864)
+..+.++.+ +++ .+..... ....++||||++| ++.+.............+...+.+++
T Consensus 54 ~~~l~~l~h------------------~ni~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~ 114 (291)
T cd07870 54 ASLLKGLKH------------------ANIVLLHDIIHTKETLTFVFEYMHT-DLAQYMIQHPGGLHPYNVRLFMFQLLR 114 (291)
T ss_pred HHHHHhcCC------------------CCEeEEEEEEecCCeEEEEEecccC-CHHHHHHhCCCCCCHHHHHHHHHHHHH
Confidence 555554422 122 2222222 4567899999975 44333221222233444444333433
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+..+|..|++|+|+||+||+++.+ ++++|+|||++...
T Consensus 115 ~L~~lH~~~i~H~dlkp~Nil~~~~--~~~~l~Dfg~~~~~ 153 (291)
T cd07870 115 GLAYIHGQHILHRDLKPQNLLISYL--GELKLADFGLARAK 153 (291)
T ss_pred HHHHHHhCCcccCCCChHHEEEcCC--CcEEEecccccccc
Confidence 778899999999999999999865 89999999988654
No 269
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.19 E-value=1.3e-10 Score=123.36 Aligned_cols=140 Identities=16% Similarity=0.217 Sum_probs=97.6
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|+||+|+.+ +++.|++|..+.... . -++.+|.
T Consensus 9 ~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~------~---------------------------------~~~~~e~ 49 (256)
T cd06612 9 EKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED------L---------------------------------QEIIKEI 49 (256)
T ss_pred hhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH------H---------------------------------HHHHHHH
Confidence 56999999999999987 589999998653211 0 0133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
+.+.++.+ ..-+.+...+. ....+++|||++|.+|.++........+...+...+.+++ +
T Consensus 50 ~~~~~l~~-----------------~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l 112 (256)
T cd06612 50 SILKQCDS-----------------PYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGL 112 (256)
T ss_pred HHHHhCCC-----------------CcEeeeeeeeecCCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHH
Confidence 55444421 00122222222 4567899999999999988654444455555555555443 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
..+|..|++|+|++|+||+++.+ +.++|+|||++..+...
T Consensus 113 ~~lh~~~i~H~dl~~~ni~~~~~--~~~~l~dfg~~~~~~~~ 152 (256)
T cd06612 113 EYLHSNKKIHRDIKAGNILLNEE--GQAKLADFGVSGQLTDT 152 (256)
T ss_pred HHHHHCCcccCCCCcceEEECCC--CcEEEcccccchhcccC
Confidence 78899999999999999999865 89999999998877643
No 270
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.19 E-value=8.9e-11 Score=125.77 Aligned_cols=80 Identities=13% Similarity=0.078 Sum_probs=58.4
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCC-----CceEEEe
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPP-----HRPILLD 198 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~-----g~i~LiD 198 (864)
....+|+|||++|.+|..+........+...+...+.+++ +..+|+.|++|+|+||.|||++.++. ..++++|
T Consensus 76 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d 155 (262)
T cd05077 76 DVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSD 155 (262)
T ss_pred CCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCC
Confidence 4568999999999998776443223345555544444443 78899999999999999999975421 1388999
Q ss_pred ccccccc
Q 002927 199 FGLTKKL 205 (864)
Q Consensus 199 FG~~~~l 205 (864)
||++..+
T Consensus 156 ~g~~~~~ 162 (262)
T cd05077 156 PGIPITV 162 (262)
T ss_pred CCCCccc
Confidence 9987654
No 271
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.19 E-value=1.2e-10 Score=124.73 Aligned_cols=76 Identities=21% Similarity=0.262 Sum_probs=58.0
Q ss_pred ceEEEeecCCcCCCChHHHhh-----cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccc
Q 002927 129 TVLILEFMDGIRLNDCESLEA-----FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGL 201 (864)
Q Consensus 129 ~vLvmE~i~G~~L~~~~~~~~-----~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~ 201 (864)
.+++|||++|.+|........ ...+...+...+.+++ +..+|..|++|+|+||.||+++++ ++++|+|||+
T Consensus 82 ~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~--~~~kl~dfg~ 159 (273)
T cd05035 82 PMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLRED--MTVCVADFGL 159 (273)
T ss_pred cEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCC--CeEEECCccc
Confidence 589999999999987653322 1234444444444443 788999999999999999999865 8999999999
Q ss_pred ccccC
Q 002927 202 TKKLS 206 (864)
Q Consensus 202 ~~~l~ 206 (864)
++.+.
T Consensus 160 ~~~~~ 164 (273)
T cd05035 160 SKKIY 164 (273)
T ss_pred eeecc
Confidence 87654
No 272
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.19 E-value=9.3e-11 Score=128.45 Aligned_cols=141 Identities=18% Similarity=0.181 Sum_probs=92.8
Q ss_pred cccccccceeeEEEEec-CCC----EEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 11 TPLATASIAQVHRATLV-DGR----QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~----~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
+.||+|++|+||+|+.. +|+ .||+|+..+....... ..+
T Consensus 13 ~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~------------------------------------~~~ 56 (303)
T cd05110 13 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKAN------------------------------------VEF 56 (303)
T ss_pred cccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHH------------------------------------HHH
Confidence 67999999999999965 565 5788876543321100 013
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHH
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 164 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~ 164 (864)
.+|...+.++.+ ++ +.+..........++|||+++++|.+.............+...+.++
T Consensus 57 ~~e~~~~~~l~h------------------~niv~~~~~~~~~~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi 118 (303)
T cd05110 57 MDEALIMASMDH------------------PHLVRLLGVCLSPTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQI 118 (303)
T ss_pred HHHHHHHHhCCC------------------CCcccEEEEEcCCCceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHH
Confidence 445554444322 11 12222222445679999999999887754322234444444444443
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
. +..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 119 ~~~L~~LH~~~ivH~dikp~Nill~~~--~~~kL~Dfg~~~~~~~ 161 (303)
T cd05110 119 AKGMMYLEERRLVHRDLAARNVLVKSP--NHVKITDFGLARLLEG 161 (303)
T ss_pred HHHHHHHhhcCeeccccccceeeecCC--CceEEccccccccccC
Confidence 3 778999999999999999999865 7899999999987653
No 273
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.19 E-value=8.8e-11 Score=126.78 Aligned_cols=141 Identities=14% Similarity=0.164 Sum_probs=90.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.+ +|+.||||+.+....... +.++..|.
T Consensus 7 ~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------~~~~~~e~ 50 (283)
T cd06617 7 EELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQE------------------------------------QKRLLMDL 50 (283)
T ss_pred EEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHH------------------------------------HHHHHHHH
Confidence 56999999999999986 799999998765432111 01112222
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHH---hhcCCCHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESL---EAFGVNKQKVVEEITRA 164 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~---~~~~~~~~~l~~~~~~~ 164 (864)
....+.. +++. +.+...+. ....+++|||++| +|.++... .....+...+...+.++
T Consensus 51 ~~~~~~~-----------------~~~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~~~qi 112 (283)
T cd06617 51 DISMRSV-----------------DCPYTVTFYGALFREGDVWICMEVMDT-SLDKFYKKVYDKGLTIPEDILGKIAVSI 112 (283)
T ss_pred HHHHHHc-----------------CCCCeeeeeEEEecCCcEEEEhhhhcc-cHHHHHHHhccCCCCCCHHHHHHHHHHH
Confidence 2212211 1121 22222222 5678899999986 44444321 11234455555555554
Q ss_pred H--HHHHHhc-CeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 165 Y--AHQIYVD-GFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 165 ~--l~~i~~~-G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+ +..+|.. |++|+|+||+||+++.+ +.++|+|||++..+..
T Consensus 113 ~~~l~~lH~~~~i~h~dlkp~nil~~~~--~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 113 VKALEYLHSKLSVIHRDVKPSNVLINRN--GQVKLCDFGISGYLVD 156 (283)
T ss_pred HHHHHHHhhcCCeecCCCCHHHEEECCC--CCEEEeeccccccccc
Confidence 4 7888987 99999999999999865 8999999999876643
No 274
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.18 E-value=1.1e-10 Score=127.99 Aligned_cols=142 Identities=18% Similarity=0.132 Sum_probs=91.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+-|++|++|.||+|+.. +|+.||||+......... + ..-++.+|.
T Consensus 21 ~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~----------------------------~------~~~~~~~Ei 66 (307)
T cd06607 21 REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSN----------------------------E------KWQDIIKEV 66 (307)
T ss_pred eeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcH----------------------------H------HHHHHHHHH
Confidence 56999999999999976 799999997642211000 0 001133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
..+.++.+ +. +.+..++. ....+|||||++|. +.+.............+...+.+++
T Consensus 67 ~~l~~l~h------------------~niv~~~~~~~~~~~~~lv~e~~~g~-l~~~~~~~~~~l~~~~~~~~~~ql~~~ 127 (307)
T cd06607 67 RFLQQLRH------------------PNTIEYKGCYLREHTAWLVMEYCLGS-ASDILEVHKKPLQEVEIAAICHGALQG 127 (307)
T ss_pred HHHHhCCC------------------CCEEEEEEEEEeCCeEEEEHHhhCCC-HHHHHHHcccCCCHHHHHHHHHHHHHH
Confidence 44444422 12 22333333 56678999999873 3333322223345555444443433
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|++|.||+++.+ +.++|+|||++...+.
T Consensus 128 L~~LH~~~i~H~dl~p~nIl~~~~--~~~kL~dfg~~~~~~~ 167 (307)
T cd06607 128 LAYLHSHERIHRDIKAGNILLTEP--GTVKLADFGSASLVSP 167 (307)
T ss_pred HHHHHHCCceecCCCcccEEECCC--CCEEEeecCcceecCC
Confidence 778899999999999999999865 8999999999876543
No 275
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.18 E-value=1.3e-10 Score=125.57 Aligned_cols=137 Identities=16% Similarity=0.195 Sum_probs=90.6
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.. +++.||+|+........ . ++..|.
T Consensus 22 ~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~--~------------------------------------~~~~e~ 63 (282)
T cd06636 22 EVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEE--E------------------------------------EIKLEI 63 (282)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHH--H------------------------------------HHHHHH
Confidence 67999999999999975 79999999864321110 0 122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----------cCCceEEEeecCCcCCCChHHHhhc-CCCHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----------SSETVLILEFMDGIRLNDCESLEAF-GVNKQKVV 158 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----------~~~~vLvmE~i~G~~L~~~~~~~~~-~~~~~~l~ 158 (864)
..+.++.. ++. +.+++. ....+++|||++|.+|.++...... ......+.
T Consensus 64 ~~l~~~~~-----------------h~~--i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~ 124 (282)
T cd06636 64 NMLKKYSH-----------------HRN--IATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIA 124 (282)
T ss_pred HHHHHhcC-----------------CCc--EEEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHH
Confidence 33444321 111 222221 1345799999999999887653222 23444343
Q ss_pred HHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 159 EEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 159 ~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 125 ~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~--~~~~l~dfg~~~~~~ 172 (282)
T cd06636 125 YICREILRGLAHLHAHKVIHRDIKGQNVLLTEN--AEVKLVDFGVSAQLD 172 (282)
T ss_pred HHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC--CCEEEeeCcchhhhh
Confidence 3333333 778899999999999999999865 889999999987654
No 276
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.18 E-value=1.3e-10 Score=123.88 Aligned_cols=141 Identities=18% Similarity=0.188 Sum_probs=98.9
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|+.|++|.||+|+.. +|+.|+||+.++...... .-++.+|.
T Consensus 7 ~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~------------------------------------~~~~~~e~ 50 (264)
T cd06623 7 KVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEF------------------------------------RKQLLREL 50 (264)
T ss_pred eeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHH------------------------------------HHHHHHHH
Confidence 78999999999999987 699999998765432100 01134455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
+.+.++++. .-+.+...+. ....+++|||++|.+|.++.... .......+...+.+++ +
T Consensus 51 ~~l~~l~~~-----------------~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l 112 (264)
T cd06623 51 KTLRSCESP-----------------YVVKCYGAFYKEGEISIVLEYMDGGSLADLLKKV-GKIPEPVLAYIARQILKGL 112 (264)
T ss_pred HHHHhcCCC-----------------CeeeEEEEEccCCeEEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHH
Confidence 555554321 0122222222 56678999999999999875432 3455555555544444 7
Q ss_pred HHHHh-cCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 167 HQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 167 ~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+|. .|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 113 ~~lh~~~~~~H~~l~~~ni~~~~~--~~~~l~df~~~~~~~~ 152 (264)
T cd06623 113 DYLHTKRHIIHRDIKPSNLLINSK--GEVKIADFGISKVLEN 152 (264)
T ss_pred HHHhccCCCccCCCCHHHEEECCC--CCEEEccCccceeccc
Confidence 78999 999999999999999865 8999999999887654
No 277
>PHA02988 hypothetical protein; Provisional
Probab=99.18 E-value=1.2e-10 Score=126.59 Aligned_cols=140 Identities=17% Similarity=0.189 Sum_probs=95.6
Q ss_pred ccccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 10 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
...|+.|+++.||+|+. +|+.||||+.+...... ..+++ .|.+|+
T Consensus 25 ~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~------------------------~~~~~----------~~~~E~ 69 (283)
T PHA02988 25 SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGH------------------------KVLID----------ITENEI 69 (283)
T ss_pred CeEEeeCCceEEEEEEE-CCEEEEEEecccccccc------------------------HHHHH----------HHHHHH
Confidence 46799999999999997 79999999876432110 00000 145577
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--------cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEI 161 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~ 161 (864)
+.+.++++ + .|.+++. ....+|+|||++|++|.++.... ...+.....+.+
T Consensus 70 ~~l~~l~h------------------~--nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~-~~~~~~~~~~i~ 128 (283)
T PHA02988 70 KNLRRIDS------------------N--NILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKE-KDLSFKTKLDMA 128 (283)
T ss_pred HHHHhcCC------------------C--CEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhC-CCCChhHHHHHH
Confidence 77666643 1 2333332 23468999999999999886432 234444444444
Q ss_pred HHHH--HHHHHh-cCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 162 TRAY--AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 162 ~~~~--l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
.++. +..+|. .|++|||++|.||+++.+ +.++|+|||++..++.
T Consensus 129 ~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~--~~~kl~dfg~~~~~~~ 175 (283)
T PHA02988 129 IDCCKGLYNLYKYTNKPYKNLTSVSFLVTEN--YKLKIICHGLEKILSS 175 (283)
T ss_pred HHHHHHHHHHHhcCCCCCCcCChhhEEECCC--CcEEEcccchHhhhcc
Confidence 4433 678887 599999999999999865 8999999999876543
No 278
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.18 E-value=6.6e-11 Score=128.97 Aligned_cols=145 Identities=20% Similarity=0.222 Sum_probs=94.3
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|+.|++|+||+|..+ +|+.||||..+........ .+. +-.+..|+
T Consensus 6 ~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~--------------------------~~~------~~~~~~e~ 53 (298)
T cd07841 6 KKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAK--------------------------DGI------NFTALREI 53 (298)
T ss_pred eeeeeccccEEEEEEECCCCcEEEEEEEecccccccc--------------------------chh------hHHHHHHH
Confidence 46999999999999976 7999999987654321000 000 01123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
..+.++++. .-+.+...+. ....++||||+ +.+|.++.......++...+...+.+++ +
T Consensus 54 ~~l~~~~h~-----------------~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al 115 (298)
T cd07841 54 KLLQELKHP-----------------NIIGLLDVFGHKSNINLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGL 115 (298)
T ss_pred HHHhhcCCC-----------------CChhhhheeecCCEEEEEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHH
Confidence 444444321 0111122222 34568999999 7788776532221355555555555444 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+|..|++|+|++|+||+++.+ +.++|+|||++..+..
T Consensus 116 ~~lH~~~i~H~dl~p~nill~~~--~~~~l~dfg~~~~~~~ 154 (298)
T cd07841 116 EYLHSNWILHRDLKPNNLLIASD--GVLKLADFGLARSFGS 154 (298)
T ss_pred HHHHhCCeeecCCChhhEEEcCC--CCEEEccceeeeeccC
Confidence 78899999999999999999865 8999999999877643
No 279
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.18 E-value=1.4e-10 Score=123.88 Aligned_cols=141 Identities=18% Similarity=0.138 Sum_probs=94.9
Q ss_pred cccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHHH
Q 002927 13 LATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAEN 91 (864)
Q Consensus 13 lasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~n 91 (864)
||.|++|.||+|+.. +|+.||||+..+.....- + .+-.+.+|.+.
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~----------------------------~------~~~~~~~e~~~ 46 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVET----------------------------G------QQEHIFSEKEI 46 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhh----------------------------h------HHHHHHHHHHH
Confidence 689999999999976 699999998753221100 0 01124455555
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HH
Q 002927 92 TRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AH 167 (864)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~ 167 (864)
+.++.+ +. +.+..... ....+++|||++|.+|.++.... .......+...+.+++ +.
T Consensus 47 l~~l~h------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~ 107 (262)
T cd05572 47 LEECNH------------------PFIVKLYRTFKDKKYIYMLMEYCLGGELWTILRDR-GLFDEYTARFYIACVVLAFE 107 (262)
T ss_pred HHhCCC------------------CCEeeeeeeEEcCCccEEEEecCCCCcHHHHHhhc-CCCCHHHHHHHHHHHHHHHH
Confidence 544422 11 11222222 56688999999999998875422 2344444444443433 78
Q ss_pred HHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 168 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 168 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
.+|..|++|+|++|.||+++.+ +.++|+|||++..+...
T Consensus 108 ~lH~~~~~h~dl~~~nilv~~~--~~~~l~df~~~~~~~~~ 146 (262)
T cd05572 108 YLHNRGIIYRDLKPENLLLDSN--GYVKLVDFGFAKKLKSG 146 (262)
T ss_pred HHhhCCcccCCCCHHHEEEcCC--CCEEEeeCCcccccCcc
Confidence 9999999999999999999865 89999999999887654
No 280
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.18 E-value=7.1e-11 Score=128.10 Aligned_cols=142 Identities=20% Similarity=0.218 Sum_probs=92.0
Q ss_pred cccccccceeeEEEEec----CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHH
Q 002927 11 TPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 86 (864)
Q Consensus 11 ~plasaSigqV~~A~l~----~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 86 (864)
+.|+.|++|+||+|+.. +++.||||+.+...... ... ..-.+.
T Consensus 6 ~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~---~~~------------------------------~~~~~~ 52 (288)
T cd05583 6 RVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQ---KAK------------------------------TAEHTR 52 (288)
T ss_pred EEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHh---hhh------------------------------HHHHHH
Confidence 67999999999999852 67899999876321100 000 001133
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeE---Ee-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH
Q 002927 87 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEV---IQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 162 (864)
Q Consensus 87 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v---~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~ 162 (864)
+|...+.++++ + -.++++ +. ....+|||||++|.+|.+.... ...+....+...+.
T Consensus 53 ~E~~~l~~~~~-----------------~--~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~ 112 (288)
T cd05583 53 TERQVLEAVRR-----------------C--PFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQ-REHFTESEVRVYIA 112 (288)
T ss_pred HHHHHHHhccC-----------------C--cchhhhheeeecCCEEEEEEecCCCCcHHHHHhh-cCCcCHHHHHHHHH
Confidence 45555555432 1 111222 12 3456799999999988776432 22344454444443
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
++. +..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 113 ql~~~l~~lH~~~~~H~dl~p~nil~~~~--~~~~l~dfg~~~~~~~ 157 (288)
T cd05583 113 EIVLALDHLHQLGIIYRDIKLENILLDSE--GHVVLTDFGLSKEFLA 157 (288)
T ss_pred HHHHHHHHHHHCCeeccCCCHHHeEECCC--CCEEEEECcccccccc
Confidence 433 778899999999999999999865 8999999999876543
No 281
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.18 E-value=6.3e-11 Score=137.83 Aligned_cols=142 Identities=15% Similarity=0.187 Sum_probs=100.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|-+|+||+++.+ +|+.+||||+.|.....-+.++ |.
T Consensus 25 evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~--------------------------------------ey 66 (953)
T KOG0587|consen 25 EVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIEL--------------------------------------EY 66 (953)
T ss_pred EEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHH--------------------------------------HH
Confidence 56999999999999954 8999999999987654322111 11
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---------cCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---------SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVE 159 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---------~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~ 159 (864)
|+.++.. +++ .++..|. ..+.+||||||.|+++.|+.+-.. ...+...++-
T Consensus 67 -nil~~~~----------------~hp--nv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaY 127 (953)
T KOG0587|consen 67 -NMLKKYS----------------HHP--NVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAY 127 (953)
T ss_pred -HHHHhcc----------------CCC--CcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHH
Confidence 2222221 122 2333331 356789999999999999976433 1233444555
Q ss_pred HHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHHH
Q 002927 160 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQ 211 (864)
Q Consensus 160 ~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~ 211 (864)
++..++ +.++|...++|||+|-.|||++.+ |+++|+|||...+++....+
T Consensus 128 I~re~lrgl~HLH~nkviHRDikG~NiLLT~e--~~VKLvDFGvSaQldsT~gr 179 (953)
T KOG0587|consen 128 ILREILRGLAHLHNNKVIHRDIKGQNVLLTEN--AEVKLVDFGVSAQLDSTVGR 179 (953)
T ss_pred HHHHHHHHHHHHhhcceeeecccCceEEEecc--CcEEEeeeeeeeeeeccccc
Confidence 555554 777899999999999999999976 99999999999999876543
No 282
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.18 E-value=4.5e-11 Score=130.33 Aligned_cols=77 Identities=22% Similarity=0.368 Sum_probs=60.1
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
....+++|||++|.+|.++.. ....+...+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++.
T Consensus 91 ~~~~~lv~e~~~~~~L~~~~~--~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~--~~~kL~dfg~~~ 166 (292)
T cd06658 91 GDELWVVMEFLEGGALTDIVT--HTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSD--GRIKLSDFGFCA 166 (292)
T ss_pred CCeEEEEEeCCCCCcHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCC--CCEEEccCcchh
Confidence 355689999999999987643 33355555555555544 788999999999999999999865 899999999876
Q ss_pred ccC
Q 002927 204 KLS 206 (864)
Q Consensus 204 ~l~ 206 (864)
.+.
T Consensus 167 ~~~ 169 (292)
T cd06658 167 QVS 169 (292)
T ss_pred hcc
Confidence 543
No 283
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.18 E-value=6e-11 Score=130.22 Aligned_cols=142 Identities=15% Similarity=0.104 Sum_probs=93.7
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|.||+|+.+ +|+.||+|+.+...... ..+..+.+|+
T Consensus 13 ~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~-----------------------------------~~~~~~~~E~ 57 (309)
T cd07845 13 NRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERD-----------------------------------GIPISSLREI 57 (309)
T ss_pred eeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCC-----------------------------------CCcchhhHHH
Confidence 56999999999999976 79999999865322100 0011233455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH-
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~- 165 (864)
+.+.++++. .-+.+..++. ....++||||++| +|.++.......+....+...+.+++
T Consensus 58 ~~l~~l~h~-----------------~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~ 119 (309)
T cd07845 58 TLLLNLRHP-----------------NIVELKEVVVGKHLDSIFLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLR 119 (309)
T ss_pred HHHHhCCCC-----------------CCcceEEEEecCCCCeEEEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHH
Confidence 555554321 1223333332 1346899999986 55555432223344555544444444
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|++|+||+++.+ +.++|+|||++..+..
T Consensus 120 ~l~~lH~~~i~H~dl~p~nil~~~~--~~~kL~dfg~~~~~~~ 160 (309)
T cd07845 120 GLQYLHENFIIHRDLKVSNLLLTDK--GCLKIADFGLARTYGL 160 (309)
T ss_pred HHHHHHhCCeecCCCCHHHEEECCC--CCEEECccceeeecCC
Confidence 778999999999999999999865 8999999999887643
No 284
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.18 E-value=1e-10 Score=125.47 Aligned_cols=140 Identities=15% Similarity=0.170 Sum_probs=91.7
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|+||+|+.. +++.||||+....-.. +.++..|.
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~--------------------------------------~~~~~~e~ 53 (272)
T cd06637 12 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE--------------------------------------EEEIKQEI 53 (272)
T ss_pred HheeecCCeEEEEEEEcCCCcEEEEEEEEcCCcc--------------------------------------HHHHHHHH
Confidence 56999999999999976 7899999986432110 01122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-------cCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-------SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEE 160 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-------~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~ 160 (864)
..+.++.+ ++. +.+...+. ....+++|||+.|.+|.++..... .......+...
T Consensus 54 ~~l~~~~~-----------------h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~ 116 (272)
T cd06637 54 NMLKKYSH-----------------HRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYI 116 (272)
T ss_pred HHHHHhcC-----------------CCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHH
Confidence 44443321 111 12222221 123579999999999988754322 22344444444
Q ss_pred HHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 161 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 161 ~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+.+++ +..+|..|++|+|+||+||+++.+ +.++|+|||++..+..
T Consensus 117 ~~qi~~~l~~LH~~~ivh~dl~~~nili~~~--~~~~l~Dfg~~~~~~~ 163 (272)
T cd06637 117 CREILRGLSHLHQHKVIHRDIKGQNVLLTEN--AEVKLVDFGVSAQLDR 163 (272)
T ss_pred HHHHHHHHHHHHHCCCccCCCCHHHEEECCC--CCEEEccCCCceeccc
Confidence 33333 778999999999999999999865 8899999999876643
No 285
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.17 E-value=9.6e-12 Score=119.52 Aligned_cols=143 Identities=17% Similarity=0.204 Sum_probs=90.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|.+|.|++|+.+ +++.||+|-.|-+-.+ +....+..+|+-+.+|.
T Consensus 8 ekigegtygtvfkarn~~t~eivalkrvrldddd-----------------------------egvpssalreicllkel 58 (292)
T KOG0662|consen 8 EKIGEGTYGTVFKARNRETHEIVALKRVRLDDDD-----------------------------EGVPSSALREICLLKEL 58 (292)
T ss_pred HhhcCCcceeeEecccCCccceEEEEEEeccCCC-----------------------------CCCcHHHHHHHHHHHHh
Confidence 56999999999999976 7999999976532111 01112233455555565
Q ss_pred H--HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH-
Q 002927 90 E--NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 90 ~--n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~- 165 (864)
+ |+.|+. .+.. ..+..||.|||+- .|..+........|.+.+-.-+.+.+
T Consensus 59 khknivrl~-------------------------dvlhsdkkltlvfe~cdq-dlkkyfdslng~~d~~~~rsfmlqllr 112 (292)
T KOG0662|consen 59 KHKNIVRLH-------------------------DVLHSDKKLTLVFEFCDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLR 112 (292)
T ss_pred hhcceeehh-------------------------hhhccCceeEEeHHHhhH-HHHHHHHhcCCcCCHHHHHHHHHHHHh
Confidence 4 233332 2223 3455699999972 22222111222344443333333333
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHH
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMK 210 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r 210 (864)
+...|.+++.|||+||.|++++.+ |+++|.|||+++.+.-..|
T Consensus 113 gl~fchshnvlhrdlkpqnllin~n--gelkladfglarafgipvr 156 (292)
T KOG0662|consen 113 GLGFCHSHNVLHRDLKPQNLLINRN--GELKLADFGLARAFGIPVR 156 (292)
T ss_pred hhhhhhhhhhhhccCCcceEEeccC--CcEEecccchhhhcCCceE
Confidence 445689999999999999999975 9999999999987665443
No 286
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.17 E-value=1.4e-10 Score=124.27 Aligned_cols=138 Identities=17% Similarity=0.176 Sum_probs=94.3
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
++|++|++|.||+|+.+ +++.|++|+........ -++.+|.
T Consensus 12 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~--------------------------------------~~~~~e~ 53 (275)
T cd06608 12 EVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEE--------------------------------------EEIKEEY 53 (275)
T ss_pred eeecCCCCeEEEEEEECCCCcEEEEEEEecCchhH--------------------------------------HHHHHHH
Confidence 78999999999999986 78999999876543210 0133444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---c-------CCceEEEeecCCcCCCChHHHhh---cCCCHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---S-------SETVLILEFMDGIRLNDCESLEA---FGVNKQK 156 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~-------~~~vLvmE~i~G~~L~~~~~~~~---~~~~~~~ 156 (864)
..+.++.. + -.+++++. . ...+++|||++|.+|.++..... ...+...
T Consensus 54 ~~l~~~~~-----------------h--~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~ 114 (275)
T cd06608 54 NILRKYSN-----------------H--PNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEW 114 (275)
T ss_pred HHHHHhcC-----------------C--CChheEEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHH
Confidence 44444421 1 11222221 1 12589999999999988754322 2344444
Q ss_pred HHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 157 VVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 157 l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 115 ~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~--~~~~l~d~~~~~~~~~ 165 (275)
T cd06608 115 IAYILRETLRGLAYLHENKVIHRDIKGQNILLTKN--AEVKLVDFGVSAQLDS 165 (275)
T ss_pred HHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccC--CeEEECCCccceeccc
Confidence 444444333 678899999999999999999865 8999999999876654
No 287
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.17 E-value=9.3e-11 Score=124.46 Aligned_cols=146 Identities=16% Similarity=0.082 Sum_probs=93.5
Q ss_pred ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 10 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
.+.||+|++|+||+|+.+ +|+.|+||+.......... .+..+. +.+|
T Consensus 5 ~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~--------------------------~~~~~~------~~~e 52 (258)
T cd06632 5 GELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTG--------------------------QEAVKQ------LEQE 52 (258)
T ss_pred cceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccc--------------------------hHHHHH------HHHH
Confidence 478999999999999987 8999999987542211000 000011 2234
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
..-+.++.+. .-+.+..... ....+++|||++|.+|.++.... ...+...+...+.+++
T Consensus 53 ~~~l~~~~h~-----------------~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~ 114 (258)
T cd06632 53 IALLSKLQHP-----------------NIVQYLGTEREEDNLYIFLELVPGGSLAKLLKKY-GSFPEPVIRLYTRQILLG 114 (258)
T ss_pred HHHHHhcCCC-----------------CchheeeeEecCCeEEEEEEecCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHH
Confidence 4333333210 0111111212 45678999999999998775322 2244444433333333
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|++|+||+++.+ +.++|+|||++..+..
T Consensus 115 l~~lH~~~i~H~dl~~~ni~~~~~--~~~kl~d~~~~~~~~~ 154 (258)
T cd06632 115 LEYLHDRNTVHRDIKGANILVDTN--GVVKLADFGMAKQVVE 154 (258)
T ss_pred HHHHHHCCcccCCCCHHHEEECCC--CCEEEccCccceeccc
Confidence 678899999999999999999865 8999999999877644
No 288
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.17 E-value=5.2e-11 Score=126.80 Aligned_cols=141 Identities=12% Similarity=0.133 Sum_probs=95.7
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
++|+.|++|.||+|+.. +|+.||+|+........ .+ ..-++..|.
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~----~~------------------------------~~~~~~~e~ 51 (258)
T cd05578 6 RVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVE----KG------------------------------SVRNVLNER 51 (258)
T ss_pred EEeccCCCceEEEEEEccCCcEEEEEEEehhhhcc----hh------------------------------HHHHHHHHH
Confidence 68999999999999976 79999999875321100 00 000123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.++++.+ + .+++++. ....+++|||++|.+|.+..... ...+...+...+.+++
T Consensus 52 ~~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~ 110 (258)
T cd05578 52 RILQELNH------------------P--FLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQK-VKFSEEQVKFWICEIV 110 (258)
T ss_pred HHHHhCCC------------------C--ChHHHHHhhcCCCeEEEEEeCCCCCCHHHHHHhc-CCcCHHHHHHHHHHHH
Confidence 43333321 1 1222221 34578999999999998775432 3556666666555554
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+..+|..|++|+|++|.||+++.+ +.++|+|||.+..+...
T Consensus 111 ~~l~~lh~~~i~h~dl~~~nil~~~~--~~~~l~d~~~~~~~~~~ 153 (258)
T cd05578 111 LALEYLHSKGIIHRDIKPDNILLDEQ--GHVHITDFNIATKVTPD 153 (258)
T ss_pred HHHHHHHhCCeeccCCCHHHeEEcCC--CCEEEeecccccccCCC
Confidence 778899999999999999999865 89999999988766543
No 289
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.17 E-value=1.2e-10 Score=127.96 Aligned_cols=141 Identities=14% Similarity=0.198 Sum_probs=87.7
Q ss_pred cccccccccceeeEEEEec---CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 9 VETPLATASIAQVHRATLV---DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 9 d~~plasaSigqV~~A~l~---~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
+...||.|++|.||+|+.+ +++.||||..+..... ..+
T Consensus 5 ~g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~---------------------------------------~~~ 45 (317)
T cd07867 5 EGCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGIS---------------------------------------MSA 45 (317)
T ss_pred eceEeccCCCeeEEEEEecCCCccceEEEEEecCCCCc---------------------------------------HHH
Confidence 3467999999999999975 4578999976532100 012
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe---cCCceEEEeecCCcCCCChHHHhh--------cCCC
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ---SSETVLILEFMDGIRLNDCESLEA--------FGVN 153 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~~~--------~~~~ 153 (864)
.+|++.+.++.+ +. +.+..++. ....+++|||++| .+.++..... ..+.
T Consensus 46 ~~E~~~l~~l~h------------------~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~ 106 (317)
T cd07867 46 CREIALLRELKH------------------PNVIALQKVFLSHSDRKVWLLFDYAEH-DLWHIIKFHRASKANKKPMQLP 106 (317)
T ss_pred HHHHHHHHhCCC------------------CCeeeEEEEEeccCCCeEEEEEeeeCC-cHHHHHHhhhccccCCCCccCC
Confidence 335554444432 12 22333332 2346799999986 4443322111 1233
Q ss_pred HHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccC--CCCceEEEecccccccCh
Q 002927 154 KQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKD--PPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 154 ~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~--~~g~i~LiDFG~~~~l~~ 207 (864)
...+...+.+++ +..+|..|++|+|+||.||++..+ .+++++|+|||+++.+..
T Consensus 107 ~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~ 164 (317)
T cd07867 107 RSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS 164 (317)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCC
Confidence 333333333333 778899999999999999999532 247899999999986643
No 290
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.17 E-value=4.1e-11 Score=132.68 Aligned_cols=139 Identities=20% Similarity=0.238 Sum_probs=98.3
Q ss_pred ccccccc-cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhh
Q 002927 4 MFMDFVE-TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKE 82 (864)
Q Consensus 4 ~F~~fd~-~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~E 82 (864)
-|++|.+ +=||+|+-|.|++|+++ ++.||||- +.+.-+.|+
T Consensus 122 PFe~IsELeWlGSGaQGAVF~Grl~-netVAVKK----V~elkETdI--------------------------------- 163 (904)
T KOG4721|consen 122 PFEEISELEWLGSGAQGAVFLGRLH-NETVAVKK----VRELKETDI--------------------------------- 163 (904)
T ss_pred CHHHhhhhhhhccCcccceeeeecc-CceehhHH----HhhhhhhhH---------------------------------
Confidence 3667754 78999999999999985 78999993 223333333
Q ss_pred ccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEE-eeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHH
Q 002927 83 LDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLI-PEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEE 160 (864)
Q Consensus 83 ld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~v-P~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~ 160 (864)
+++++++| +++.- --|-. +-..+|+||||.-+.|..+++.. ..+.+..++..
T Consensus 164 -------KHLRkLkH------------------~NII~FkGVCtqsPcyCIiMEfCa~GqL~~VLka~-~~itp~llv~W 217 (904)
T KOG4721|consen 164 -------KHLRKLKH------------------PNIITFKGVCTQSPCYCIIMEFCAQGQLYEVLKAG-RPITPSLLVDW 217 (904)
T ss_pred -------HHHHhccC------------------cceeeEeeeecCCceeEEeeeccccccHHHHHhcc-CccCHHHHHHH
Confidence 34444432 12211 11100 23468999999999998886533 34566667666
Q ss_pred HHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 161 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 161 ~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
...+. +.++|.+.|||||||.-||||..+ ..|+|.|||-.+.+++.
T Consensus 218 sk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~--d~VKIsDFGTS~e~~~~ 265 (904)
T KOG4721|consen 218 SKGIAGGMNYLHLHKIIHRDLKSPNILISYD--DVVKISDFGTSKELSDK 265 (904)
T ss_pred HHHhhhhhHHHHHhhHhhhccCCCceEeecc--ceEEeccccchHhhhhh
Confidence 55544 888999999999999999999965 68999999998887654
No 291
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.17 E-value=1.6e-10 Score=131.78 Aligned_cols=38 Identities=18% Similarity=0.309 Sum_probs=34.3
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+..+|..|++|+|+||.||+++.+ +.++|+|||+++.+
T Consensus 252 L~~LH~~~ivHrdlkp~NiLl~~~--~~~kL~DfGla~~~ 289 (401)
T cd05107 252 MEFLASKNCVHRDLAARNVLICEG--KLVKICDFGLARDI 289 (401)
T ss_pred HHHHhcCCcCcccCCcceEEEeCC--CEEEEEecCcceec
Confidence 678899999999999999999864 78999999998765
No 292
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.17 E-value=7.3e-11 Score=134.38 Aligned_cols=134 Identities=16% Similarity=0.189 Sum_probs=88.8
Q ss_pred cccccccceeeEEEEec---CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHH
Q 002927 11 TPLATASIAQVHRATLV---DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 87 (864)
Q Consensus 11 ~plasaSigqV~~A~l~---~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~ 87 (864)
+.||.|++|.||+|+.+ +++.||||+...+.. +.+
T Consensus 98 ~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~~------------------------------------------~~~ 135 (392)
T PHA03207 98 SSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGKT------------------------------------------PGR 135 (392)
T ss_pred EeecCCCCeEEEEEEEcCCccceeEEEEecccccc------------------------------------------HHH
Confidence 67999999999999854 468899997643211 123
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH-
Q 002927 88 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 88 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~- 165 (864)
|.+.+.++.+. .-+.+-..+. ....+++||++.| .|.++.. ....+....+...+.+++
T Consensus 136 E~~il~~l~h~-----------------~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~-~~~~l~~~~~~~i~~ql~~ 196 (392)
T PHA03207 136 EIDILKTISHR-----------------AIINLIHAYRWKSTVCMVMPKYKC-DLFTYVD-RSGPLPLEQAITIQRRLLE 196 (392)
T ss_pred HHHHHHhcCCC-----------------CccceeeeEeeCCEEEEEehhcCC-CHHHHHH-hcCCCCHHHHHHHHHHHHH
Confidence 44444444321 0111222222 4567899999975 4444331 223345555555555544
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|||+||.|||++.+ +.++|+|||++..+..
T Consensus 197 aL~~LH~~givHrDlkp~Nill~~~--~~~~l~DfG~a~~~~~ 237 (392)
T PHA03207 197 ALAYLHGRGIIHRDVKTENIFLDEP--ENAVLGDFGAACKLDA 237 (392)
T ss_pred HHHHHHHCCccccCCCHHHEEEcCC--CCEEEccCccccccCc
Confidence 788999999999999999999865 8999999999876643
No 293
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.17 E-value=1.7e-10 Score=123.17 Aligned_cols=140 Identities=16% Similarity=0.230 Sum_probs=96.3
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
++||.|++|+||+|... +|+.|+||+........ +.. ++.+|+
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~---~~~---------------------------------~~~~e~ 50 (267)
T cd06610 7 EVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT---SVD---------------------------------ELRKEV 50 (267)
T ss_pred eeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch---HHH---------------------------------HHHHHH
Confidence 67999999999999965 78999999875322111 000 133444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhh--cCCCHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEA--FGVNKQKVVEEITR 163 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~--~~~~~~~l~~~~~~ 163 (864)
..+.++.+ + .+++++ . ....+++|||++|.+|.+...... ...+...+...+.+
T Consensus 51 ~~l~~l~~------------------~--~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~q 110 (267)
T cd06610 51 QAMSQCNH------------------P--NVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKE 110 (267)
T ss_pred HHHHhcCC------------------C--CEEEEEEEEeeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHH
Confidence 44444321 1 223333 2 566889999999999988764321 23455555554444
Q ss_pred HH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 164 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 164 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
++ +..+|..|++|+|++|.||+++++ +.++|+|||++..+...
T Consensus 111 l~~al~~lh~~~i~h~~l~p~ni~~~~~--~~~~l~df~~~~~~~~~ 155 (267)
T cd06610 111 VLKGLEYLHSNGQIHRDIKAGNILLGED--GSVKIADFGVSASLADG 155 (267)
T ss_pred HHHHHHHHHhCCeecCCCCHHhEEEcCC--CCEEEcccchHHHhccC
Confidence 44 778899999999999999999865 88999999998776543
No 294
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.16 E-value=1.2e-10 Score=124.43 Aligned_cols=147 Identities=16% Similarity=0.120 Sum_probs=96.1
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|+||+|+.. +|+.||||+.+........ +.+ ..-++.+|+
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~-~~~------------------------------~~~~~~~e~ 54 (268)
T cd06630 6 QQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSE-QEE------------------------------VVEALRKEI 54 (268)
T ss_pred ceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchh-HHH------------------------------HHHHHHHHH
Confidence 67999999999999964 8999999987643211100 000 001244566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
+.+.++++. .-+.+..++. ....+++|||++|.+|.++... ....+...+...+.+++ +
T Consensus 55 ~~l~~l~h~-----------------~iv~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~al 116 (268)
T cd06630 55 RLMARLNHP-----------------HIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSK-YGAFKEAVIINYTEQLLRGL 116 (268)
T ss_pred HHHHHcCCC-----------------ceehhhceeccCCeEEEEEeccCCCcHHHHHHH-hCCCCHHHHHHHHHHHHHHH
Confidence 666655331 0111112222 4567899999999999887542 22344444444444433 6
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+|..|++|+|++|.||+++.+ +..++|+|||++..+..
T Consensus 117 ~~LH~~~i~H~~i~~~nil~~~~-~~~~~l~dfg~~~~~~~ 156 (268)
T cd06630 117 SYLHENQIIHRDVKGANLLIDST-GQRLRIADFGAAARLAA 156 (268)
T ss_pred HHHHhCCeecCCCCHHHEEEcCC-CCEEEEccccccccccc
Confidence 78999999999999999999754 24699999999877754
No 295
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.16 E-value=1.3e-10 Score=126.39 Aligned_cols=143 Identities=17% Similarity=0.192 Sum_probs=91.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+-||+|++|.||+|+.. +|+.||||+.+...... .....+.+|.
T Consensus 7 ~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~-----------------------------------~~~~~~~~E~ 51 (295)
T cd07837 7 EKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEE-----------------------------------GIPPTALREI 51 (295)
T ss_pred eEecccCCeEEEEEEECCCCcEEEEEeehhhcccc-----------------------------------CCchHHHHHH
Confidence 56999999999999976 79999999764321100 0001133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEec-C-----CceEEEeecCCcCCCChHHHhh----cCCCHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS-S-----ETVLILEFMDGIRLNDCESLEA----FGVNKQKVVE 159 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~-~-----~~vLvmE~i~G~~L~~~~~~~~----~~~~~~~l~~ 159 (864)
..+.++.+. ..-+.+..+... . ..+++|||++| ++.++..... ..+....+..
T Consensus 52 ~~l~~l~~~----------------~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~ 114 (295)
T cd07837 52 SLLQMLSES----------------IYIVRLLDVEHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKS 114 (295)
T ss_pred HHHHHccCC----------------CCccceeeeEeecCCCCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHH
Confidence 555554321 001122222221 1 15899999997 5665543221 1234555555
Q ss_pred HHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 160 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 160 ~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.+.+++ +..+|..|++|+|+||+||+++.+ ++.++|+|||++..+.
T Consensus 115 ~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~-~~~~kl~dfg~~~~~~ 162 (295)
T cd07837 115 FMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQ-KGLLKIADLGLGRAFS 162 (295)
T ss_pred HHHHHHHHHHHHHHCCeeecCCChHHEEEecC-CCeEEEeecccceecC
Confidence 555544 788999999999999999999862 4889999999987654
No 296
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.16 E-value=1.9e-11 Score=135.82 Aligned_cols=145 Identities=13% Similarity=0.142 Sum_probs=107.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+-+|.|+||.++..+.+ ++..+|+|..+-.-. .+.-++ +-.+|.
T Consensus 10 ~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~-----------------------------t~~~r~------~A~~E~ 54 (426)
T KOG0589|consen 10 RQVGRGAFGSALLVRHKSDDKLYVLKKINLEKL-----------------------------TEPERR------SAIQEM 54 (426)
T ss_pred hhcCccccchhhhhhhccCCceEEEEEEecccc-----------------------------CchhhH------HHHHHH
Confidence 56999999999999876 789999997541110 000011 223355
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCC-ceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHHH-
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSE-TVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~-~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~~- 165 (864)
.-+.++++ ...|..++.+. .+. .+|||+|++|+++.+.....+ .-+..+++.+.++++.
T Consensus 55 ~lis~~~h-----------------P~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~ 117 (426)
T KOG0589|consen 55 DLLSKLLH-----------------PNIVEYKDSFEEDGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILL 117 (426)
T ss_pred HHHHhccC-----------------CCeeeeccchhcCCceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHH
Confidence 55555433 22344555443 455 689999999999999876544 3467888999999877
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHH
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 209 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 209 (864)
+..+|+..|+|||+|+.|||++.+ +.|+|-|||+++.+.++.
T Consensus 118 av~ylH~~~iLHRDlK~~Nifltk~--~~VkLgDfGlaK~l~~~~ 160 (426)
T KOG0589|consen 118 AVNYLHENRVLHRDLKCANIFLTKD--KKVKLGDFGLAKILNPED 160 (426)
T ss_pred HHHHHHhhhhhcccchhhhhhcccc--CceeecchhhhhhcCCch
Confidence 888999999999999999999976 789999999999998875
No 297
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.16 E-value=7.5e-11 Score=127.55 Aligned_cols=143 Identities=18% Similarity=0.171 Sum_probs=95.1
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|+.|++|+||+|+.+ +|+.||||+.+...... +.. -.+.+|.
T Consensus 7 ~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~-----------------------------~~~------~~~~~e~ 51 (288)
T cd07833 7 GVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDE-----------------------------DVK------KTALREV 51 (288)
T ss_pred EEecccCCeeEEEEEeCCCCcEEEEehhhhhcccc-----------------------------cch------hHHHHHH
Confidence 67999999999999976 78999999765321100 000 1133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
+.+.++.+. .-+.+..++. ....+++|||++|..+..+.. .....+...+...+.+++ +
T Consensus 52 ~~l~~l~~~-----------------~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l 113 (288)
T cd07833 52 KVLRQLRHE-----------------NIVNLKEAFRRKGRLYLVFEYVERTLLELLEA-SPGGLPPDAVRSYIWQLLQAI 113 (288)
T ss_pred HHHHhcCCC-----------------CeeehhheEEECCEEEEEEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHH
Confidence 555554321 0122222222 455789999999866654432 223455555555555444 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
..+|..|++|+|++|.||+++.+ +.++|+|||++..+...
T Consensus 114 ~~LH~~~i~H~dl~~~ni~~~~~--~~~kl~d~g~~~~~~~~ 153 (288)
T cd07833 114 AYCHSHNIIHRDIKPENILVSES--GVLKLCDFGFARALRAR 153 (288)
T ss_pred HHHHHCCeecCCCCHHHeEECCC--CCEEEEeeecccccCCC
Confidence 88899999999999999999865 89999999998876554
No 298
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.16 E-value=2e-10 Score=110.88 Aligned_cols=132 Identities=18% Similarity=0.275 Sum_probs=92.6
Q ss_pred ccccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 10 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
.+++++|+++.||+++.. ++.++||+.++... +.++..|.
T Consensus 3 ~~~i~~g~~~~v~~~~~~-~~~~~iK~~~~~~~---------------------------------------~~~~~~e~ 42 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTK-DEDYVLKINPSREK---------------------------------------GADREREV 42 (155)
T ss_pred ceecccccccceEEEEec-CCeEEEEecCCCCc---------------------------------------hhHHHHHH
Confidence 367999999999999974 48899998765432 01245566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..++++++. ...+|+++. .+..+++|||++|..+..... .....+...+.+.
T Consensus 43 ~~~~~l~~~------------------~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~~~~~-----~~~~~~~~~~~~~- 98 (155)
T cd05120 43 AILQLLARK------------------GLPVPKVLASGESDGWSYLLMEWIEGETLDEVSE-----EEKEDIAEQLAEL- 98 (155)
T ss_pred HHHHHHHHc------------------CCCCCeEEEEcCCCCccEEEEEecCCeecccCCH-----HHHHHHHHHHHHH-
Confidence 667776652 234666664 346899999999998876400 1122333433333
Q ss_pred HHHHHh---cCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 AHQIYV---DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~---~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|. .|++|+|+||+||+++.. +.++++|||.+...++
T Consensus 99 l~~lh~~~~~~i~H~Dl~~~Nil~~~~--~~~~l~Df~~~~~~~~ 141 (155)
T cd05120 99 LAKLHQLPLLVLCHGDLHPGNILVDDG--KILGIIDWEYAGYGPP 141 (155)
T ss_pred HHHHhCCCceEEEecCCCcceEEEECC--cEEEEEecccccCCCh
Confidence 556665 589999999999999863 7899999999886554
No 299
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.16 E-value=1.1e-10 Score=124.41 Aligned_cols=138 Identities=14% Similarity=0.144 Sum_probs=93.7
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||.|++|.||+|+.++++.|++|+.+........ ++..|..
T Consensus 12 ~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~-------------------------------------~~~~e~~ 54 (261)
T cd05148 12 RKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQ-------------------------------------DFQKEVQ 54 (261)
T ss_pred hhhccCCCccEEEeEecCCCcEEEEeccccchhhHH-------------------------------------HHHHHHH
Confidence 679999999999999888999999986533211000 1233443
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY 165 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~~ 165 (864)
.+.++.+ ..+.+++ . ....+++|||++|.+|.+...... ...+...+...+.+++
T Consensus 55 ~l~~l~~--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~ 114 (261)
T cd05148 55 ALKRLRH--------------------KHLISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVA 114 (261)
T ss_pred HHhcCCC--------------------cchhheeeeEecCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHH
Confidence 3333321 1122222 2 456789999999999988754321 2234445555444443
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|++|.||+++.+ +.++|+|||.+..+..
T Consensus 115 ~al~~lH~~~i~h~dl~~~nilv~~~--~~~kl~d~g~~~~~~~ 156 (261)
T cd05148 115 EGMAYLEEQNSIHRDLAARNILVGED--LVCKVADFGLARLIKE 156 (261)
T ss_pred HHHHHHHHCCeeccccCcceEEEcCC--ceEEEccccchhhcCC
Confidence 778899999999999999999865 8999999999876643
No 300
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.16 E-value=1.5e-10 Score=125.26 Aligned_cols=80 Identities=14% Similarity=0.172 Sum_probs=59.0
Q ss_pred cCCceEEEeecCCcCCCChHHHhh---------------cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEcc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEA---------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSK 188 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~---------------~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~ 188 (864)
....++++||+++.+|.++..... ...+...+...+.++. +..+|..|++|+|+||.||++.+
T Consensus 80 ~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~ 159 (283)
T cd05091 80 EQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFD 159 (283)
T ss_pred CCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecC
Confidence 356789999999998887754221 1133334444444433 78899999999999999999986
Q ss_pred CCCCceEEEecccccccCh
Q 002927 189 DPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 189 ~~~g~i~LiDFG~~~~l~~ 207 (864)
+ +.++|+|||+++.+..
T Consensus 160 ~--~~~kl~Dfg~~~~~~~ 176 (283)
T cd05091 160 K--LNVKISDLGLFREVYA 176 (283)
T ss_pred C--CceEeccccccccccc
Confidence 5 8899999999887643
No 301
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.16 E-value=1.8e-10 Score=126.20 Aligned_cols=142 Identities=14% Similarity=0.080 Sum_probs=95.4
Q ss_pred ccccccccceeeEEEEec------CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhc
Q 002927 10 ETPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 83 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~El 83 (864)
.+.||.|++|+||+|+.. ++..||||+.+........ -
T Consensus 40 ~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~------------------------------------~ 83 (302)
T cd05055 40 GKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSER------------------------------------E 83 (302)
T ss_pred cceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHH------------------------------------H
Confidence 367999999999999842 4568999987654321110 0
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhc-CCCHHHHHHH
Q 002927 84 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAF-GVNKQKVVEE 160 (864)
Q Consensus 84 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~-~~~~~~l~~~ 160 (864)
.+.+|.+.+.++.. +++ +.+...+. ....+|+|||+.|.+|.++...... ..+...+...
T Consensus 84 ~~~~E~~~l~~l~~-----------------h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i 146 (302)
T cd05055 84 ALMSELKIMSHLGN-----------------HENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSF 146 (302)
T ss_pred HHHHHHHHHHhccC-----------------CCCcceEEEEEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHH
Confidence 24456666555521 111 22222222 5568999999999999887543221 2455555555
Q ss_pred HHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 161 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 161 ~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..++. +..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 147 ~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~--~~~~l~dfg~~~~~~ 192 (302)
T cd05055 147 SYQVAKGMAFLASKNCIHRDLAARNVLLTHG--KIVKICDFGLARDIM 192 (302)
T ss_pred HHHHHHHHHHHHHCCeehhhhccceEEEcCC--CeEEECCCccccccc
Confidence 44443 778999999999999999999854 789999999987654
No 302
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.16 E-value=9.7e-11 Score=126.82 Aligned_cols=138 Identities=15% Similarity=0.172 Sum_probs=89.3
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|.||+|+.. +|+.||+|+.+........ . .+.+|+
T Consensus 7 ~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~------------------------------~------~~~~e~ 50 (286)
T cd06622 7 DELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKF------------------------------N------QIIMEL 50 (286)
T ss_pred hhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHH------------------------------H------HHHHHH
Confidence 57999999999999986 8999999976533211100 0 012233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHh--hcCCCHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLE--AFGVNKQKVVEEITR 163 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~--~~~~~~~~l~~~~~~ 163 (864)
..+.++.+. .+.+++ . ....++||||++|.+|..+.... ....+...+...+.+
T Consensus 51 ~~l~~~~~~--------------------~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 110 (286)
T cd06622 51 DILHKAVSP--------------------YIVDFYGAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYA 110 (286)
T ss_pred HHHHhcCCC--------------------cHHhhhhheecCCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHH
Confidence 333322110 111111 1 34568999999999997764321 113455444444444
Q ss_pred HH--HHHHHh-cCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 164 AY--AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 164 ~~--l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
++ +..+|. .|++|+|++|.||+++.+ +.++|+|||++..+.
T Consensus 111 i~~~l~~LH~~~~i~H~dl~p~nil~~~~--~~~~l~dfg~~~~~~ 154 (286)
T cd06622 111 VVKGLKFLKEEHNIIHRDVKPTNVLVNGN--GQVKLCDFGVSGNLV 154 (286)
T ss_pred HHHHHHHHHhcCCEeeCCCCHHHEEECCC--CCEEEeecCCccccc
Confidence 33 667785 699999999999999865 899999999987653
No 303
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.16 E-value=9.4e-11 Score=124.97 Aligned_cols=140 Identities=14% Similarity=0.180 Sum_probs=94.4
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
++|++|++|.||+|+.. +|+.|+||+.+..... ..+. + .+..|.
T Consensus 6 ~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~---------------------------~------~~~~e~ 50 (264)
T cd06626 6 NKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND--PKTI---------------------------K------EIADEM 50 (264)
T ss_pred eEeecCCCcEEEEEEECCCCcEEEEEEEECcccc--hHHH---------------------------H------HHHHHH
Confidence 68999999999999975 7999999997654321 0000 0 123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..+.++++ + .+.+++. ....++||||++|.+|.++.... .......+...+.+++
T Consensus 51 ~~~~~l~~------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~~i~ 109 (264)
T cd06626 51 KVLELLKH------------------P--NLVKYYGVEVHREKVYIFMEYCSGGTLEELLEHG-RILDEHVIRVYTLQLL 109 (264)
T ss_pred HHHHhCCC------------------C--ChhheeeeEecCCEEEEEEecCCCCcHHHHHhhc-CCCChHHHHHHHHHHH
Confidence 44444322 1 1222221 45678999999999999875422 1234444443333333
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+..+|..|++|+|++|+||+++.+ +.++|+|||.+..+...
T Consensus 110 ~~l~~lh~~~i~H~dl~~~nil~~~~--~~~kl~d~g~~~~~~~~ 152 (264)
T cd06626 110 EGLAYLHSHGIVHRDIKPANIFLDHN--GVIKLGDFGCAVKLKNN 152 (264)
T ss_pred HHHHHHHHCCcccCCCCHHHEEECCC--CCEEEcccccccccCCC
Confidence 678899999999999999999864 89999999998877543
No 304
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.15 E-value=1.6e-10 Score=127.30 Aligned_cols=147 Identities=17% Similarity=0.150 Sum_probs=93.4
Q ss_pred cccccccccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHh
Q 002927 3 GMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPK 81 (864)
Q Consensus 3 ~~F~~fd~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~ 81 (864)
++|..+ +-|+.|++|.||+|+.. +|+.|+||+.......... .
T Consensus 21 ~~~~~~--~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~-~--------------------------------- 64 (313)
T cd06633 21 EIFVGL--HEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNE-K--------------------------------- 64 (313)
T ss_pred HHhhcc--eeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchH-H---------------------------------
Confidence 444444 34999999999999975 7999999986532110000 0
Q ss_pred hccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHH
Q 002927 82 ELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEE 160 (864)
Q Consensus 82 Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~ 160 (864)
..++..|...+.++++. .-+.+..++. ....+++|||+.| ++.+.........+...+...
T Consensus 65 ~~~~~~E~~~l~~l~h~-----------------~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~ 126 (313)
T cd06633 65 WQDIIKEVKFLQQLKHP-----------------NTIEYKGCYLKEHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAI 126 (313)
T ss_pred HHHHHHHHHHHHhCCCC-----------------CCccEEEEEEeCCEEEEEEecCCC-CHHHHHHhcCCCCCHHHHHHH
Confidence 00133455555554321 1122333333 4567899999976 444443322333455555544
Q ss_pred HHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 161 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 161 ~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++...
T Consensus 127 ~~qi~~al~~LH~~gi~H~dl~p~nili~~~--~~~kL~dfg~~~~~ 171 (313)
T cd06633 127 THGALQGLAYLHSHNMIHRDIKAGNILLTEP--GQVKLADFGSASKS 171 (313)
T ss_pred HHHHHHHHHHHHHCCeecCCCChhhEEECCC--CCEEEeecCCCccc
Confidence 44433 788899999999999999999865 89999999987643
No 305
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.15 E-value=7.5e-11 Score=128.93 Aligned_cols=78 Identities=23% Similarity=0.364 Sum_probs=60.0
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
....+++|||++|.+|.+... ....+...+...+.+++ +..+|..|++|+|++|+||+++.+ +.++|+|||++.
T Consensus 90 ~~~~~iv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~--~~~kL~dfg~~~ 165 (297)
T cd06659 90 GEELWVLMEFLQGGALTDIVS--QTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLD--GRVKLSDFGFCA 165 (297)
T ss_pred CCeEEEEEecCCCCCHHHHHh--hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccC--CcEEEeechhHh
Confidence 456789999999999887643 33345555555444444 778899999999999999999865 899999999887
Q ss_pred ccCh
Q 002927 204 KLSS 207 (864)
Q Consensus 204 ~l~~ 207 (864)
.+..
T Consensus 166 ~~~~ 169 (297)
T cd06659 166 QISK 169 (297)
T ss_pred hccc
Confidence 6543
No 306
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.15 E-value=2.1e-10 Score=126.36 Aligned_cols=80 Identities=16% Similarity=0.184 Sum_probs=60.1
Q ss_pred cCCceEEEeecCCcCCCChHHHhh---------------cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEcc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEA---------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSK 188 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~---------------~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~ 188 (864)
....+++|||++|.+|.++..... .......+...+.++. +..+|+.|++|+|+||+||+++.
T Consensus 90 ~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~ 169 (314)
T cd05099 90 EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTE 169 (314)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcC
Confidence 455789999999999988754321 1234444444444433 77899999999999999999986
Q ss_pred CCCCceEEEecccccccCh
Q 002927 189 DPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 189 ~~~g~i~LiDFG~~~~l~~ 207 (864)
+ ++++|+|||+++.+..
T Consensus 170 ~--~~~kL~Dfg~~~~~~~ 186 (314)
T cd05099 170 D--NVMKIADFGLARGVHD 186 (314)
T ss_pred C--CcEEEccccccccccc
Confidence 5 8999999999987643
No 307
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.15 E-value=2.5e-10 Score=124.14 Aligned_cols=79 Identities=20% Similarity=0.256 Sum_probs=61.0
Q ss_pred cCCceEEEeecCCcCCCChHHHhh----------cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEA----------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHR 193 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~----------~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~ 193 (864)
....+++|||++|.+|.++..... ...+...+...+.++. +..+|..|++|+|+||.||+++.+ +.
T Consensus 91 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili~~~--~~ 168 (296)
T cd05051 91 DPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVGKN--YT 168 (296)
T ss_pred CCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceeecCC--Cc
Confidence 467899999999999987754221 1245555555555544 778899999999999999999865 89
Q ss_pred eEEEecccccccC
Q 002927 194 PILLDFGLTKKLS 206 (864)
Q Consensus 194 i~LiDFG~~~~l~ 206 (864)
++|+|||++..+.
T Consensus 169 ~~l~dfg~~~~~~ 181 (296)
T cd05051 169 IKIADFGMSRNLY 181 (296)
T ss_pred eEEccccceeecc
Confidence 9999999887653
No 308
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.15 E-value=1.8e-10 Score=128.59 Aligned_cols=139 Identities=19% Similarity=0.273 Sum_probs=90.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
++||.|++|.||+|+.. +|+.||||+.+....... ... .+.+|+
T Consensus 21 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-----------------------------~~~------~~~~E~ 65 (343)
T cd07880 21 KQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSEL-----------------------------FAK------RAYREL 65 (343)
T ss_pred EEeeecCCeEEEEEEECCCCcEEEEEEecccccchH-----------------------------HHH------HHHHHH
Confidence 68999999999999965 899999998653211100 000 123355
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-------cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 162 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~ 162 (864)
+.+.++.+.. -+.+..++. ....+|||||+ |.+|.++.. ....+...+...+.
T Consensus 66 ~~l~~l~h~~-----------------iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~--~~~l~~~~~~~i~~ 125 (343)
T cd07880 66 RLLKHMKHEN-----------------VIGLLDVFTPDLSLDRFHDFYLVMPFM-GTDLGKLMK--HEKLSEDRIQFLVY 125 (343)
T ss_pred HHHHhcCCCC-----------------ccceeeeecCCccccccceEEEEEecC-CCCHHHHHh--cCCCCHHHHHHHHH
Confidence 5555543210 112222221 23458999999 667766532 23445555444444
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 126 qi~~al~~LH~~gi~H~dlkp~Nill~~~--~~~kl~dfg~~~~~~ 169 (343)
T cd07880 126 QMLKGLKYIHAAGIIHRDLKPGNLAVNED--CELKILDFGLARQTD 169 (343)
T ss_pred HHHHHHHHHHhCCeecCCCCHHHEEEcCC--CCEEEeecccccccc
Confidence 443 788999999999999999999865 899999999987654
No 309
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.15 E-value=2.6e-10 Score=123.63 Aligned_cols=140 Identities=19% Similarity=0.200 Sum_probs=97.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.+++|++|+||+|... +++.|++|+.+.... +. -.+..|.
T Consensus 25 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-----~~---------------------------------~~~~~e~ 66 (286)
T cd06614 25 EKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-----NK---------------------------------ELIINEI 66 (286)
T ss_pred HhccCCCCeEEEEEEEccCCcEEEEEEEecCch-----hH---------------------------------HHHHHHH
Confidence 67999999999999986 799999998765432 00 0122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
..+.++.+. .-+.+...+. ....+++|||++|.+|.++........+...+...+.+++ +
T Consensus 67 ~~l~~l~~~-----------------~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L 129 (286)
T cd06614 67 LIMKDCKHP-----------------NIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGL 129 (286)
T ss_pred HHHHHCCCC-----------------CeeEEEEEEEECCEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHH
Confidence 444443220 1122233222 5678899999999999988654322456555555555444 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 130 ~~lH~~gi~H~dl~p~ni~i~~~--~~~~l~d~~~~~~~~~ 168 (286)
T cd06614 130 EYLHSQNVIHRDIKSDNILLSKD--GSVKLADFGFAAQLTK 168 (286)
T ss_pred HHHHhCCeeeCCCChhhEEEcCC--CCEEECccchhhhhcc
Confidence 78899999999999999999865 8999999998876554
No 310
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.14 E-value=2.2e-10 Score=121.78 Aligned_cols=142 Identities=17% Similarity=0.118 Sum_probs=95.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCC-hHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQG-IKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~-i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
+.||.|++|+|+.++.. +|+.|++|..... .... ..-++.+|
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~------------------------------------~~~~~~~e 49 (256)
T cd08221 6 RVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEK------------------------------------ERRDALNE 49 (256)
T ss_pred eEecccCCceEEEEEEcCCCcEEEEEEEeecccchh------------------------------------HHHHHHHH
Confidence 67999999999999965 7999999975321 1110 00113456
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHh-hcCCCHHHHHHHHHHHH-
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~l~~~~~~~~- 165 (864)
...++++.+. .-+.+...+. ....+++|||++|.+|.+..... ....+...+...+.+++
T Consensus 50 ~~~l~~~~h~-----------------~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~ 112 (256)
T cd08221 50 IVILSLLQHP-----------------NIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVS 112 (256)
T ss_pred HHHHHhCCCC-----------------CeeEEEeEEecCCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHH
Confidence 5555554221 1122222222 45678999999999998875432 12344555555444433
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|++|.||+++.+ +.++|+|||.+.....
T Consensus 113 ~l~~lh~~~i~h~dl~p~ni~~~~~--~~~kl~d~~~~~~~~~ 153 (256)
T cd08221 113 AVSYIHKAGILHRDIKTLNIFLTKA--GLIKLGDFGISKILGS 153 (256)
T ss_pred HHHHHHhCCccccCCChHhEEEeCC--CCEEECcCcceEEccc
Confidence 678899999999999999999865 8899999999876644
No 311
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.14 E-value=1.7e-10 Score=126.00 Aligned_cols=139 Identities=14% Similarity=0.211 Sum_probs=94.1
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|+.|++|.||+|+.. +|+.|+||...-..... .-.+.+|.
T Consensus 25 ~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~-------------------------------------~~~~~~e~ 67 (296)
T cd06655 25 EKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPK-------------------------------------KELIINEI 67 (296)
T ss_pred EEEecCCCeEEEEEEEcCCCcEEEEEEEecccCch-------------------------------------HHHHHHHH
Confidence 57999999999999965 89999999753211000 00123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCE-EEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v-~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
+.+..+++ +.+ .+-..+. ....++||||++|.+|.++.. ....+...+...+.+++
T Consensus 68 ~~l~~l~h------------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~l~~~~~~~i~~~l~~a 127 (296)
T cd06655 68 LVMKELKN------------------PNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVT--ETCMDEAQIAAVCRECLQA 127 (296)
T ss_pred HHHHhcCC------------------CceeeeeeeEecCceEEEEEEecCCCcHHHHHH--hcCCCHHHHHHHHHHHHHH
Confidence 44444322 121 1111222 456889999999999987643 33455555555544443
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+...
T Consensus 128 l~~LH~~~i~H~dL~p~Nili~~~--~~~kl~dfg~~~~~~~~ 168 (296)
T cd06655 128 LEFLHANQVIHRDIKSDNVLLGMD--GSVKLTDFGFCAQITPE 168 (296)
T ss_pred HHHHHHCCcccCCCCHHHEEECCC--CCEEEccCccchhcccc
Confidence 778899999999999999999865 89999999998876543
No 312
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.14 E-value=1.5e-10 Score=125.85 Aligned_cols=141 Identities=15% Similarity=0.155 Sum_probs=96.1
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|+.|++|.||+|+.+ +|+.||||..+...... . .+..+.+|.
T Consensus 11 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-----------------------------~------~~~~~~~e~ 55 (293)
T cd07843 11 NRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKE-----------------------------G------FPITSLREI 55 (293)
T ss_pred hhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccc-----------------------------c------chhhHHHHH
Confidence 78999999999999986 79999999765332110 0 001133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCE-EEeeEEe-c--CCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ-S--SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v-~vP~v~~-~--~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..+.++++ +.+ .+..... . ...+|+|||++| +|.++........+...+...+.+++
T Consensus 56 ~~l~~l~h------------------~ni~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~ 116 (293)
T cd07843 56 NILLKLQH------------------PNIVTVKEVVVGSNLDKIYMVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLL 116 (293)
T ss_pred HHHHhcCC------------------CCEEEEEEEEEecCCCcEEEEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHH
Confidence 55555432 122 2222222 3 678899999986 66665443333456666666555554
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|++|+||+++.+ +.++|+|||++..+..
T Consensus 117 ~aL~~LH~~~i~H~dl~p~nili~~~--~~~~l~d~g~~~~~~~ 158 (293)
T cd07843 117 SGVAHLHDNWILHRDLKTSNLLLNNR--GILKICDFGLAREYGS 158 (293)
T ss_pred HHHHHHHHCCeeeccCCHHHEEECCC--CcEEEeecCceeeccC
Confidence 788999999999999999999865 8999999999887654
No 313
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.14 E-value=2.4e-11 Score=144.35 Aligned_cols=76 Identities=22% Similarity=0.275 Sum_probs=57.0
Q ss_pred CCceEEEeecCCcCCCChHHHhhcCCCHHHHHH-HHHHH--HHHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 127 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVE-EITRA--YAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 127 ~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~-~~~~~--~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
...||||||++|++|-.++. ..+.-+++.++ .++.+ .+..||+-|+||||+||.|||++.. |.|+|.|||.+-
T Consensus 148 ~~LYlVMdY~pGGDlltLlS--k~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~--GHikLADFGsCl 223 (1317)
T KOG0612|consen 148 RYLYLVMDYMPGGDLLTLLS--KFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKS--GHIKLADFGSCL 223 (1317)
T ss_pred cceEEEEecccCchHHHHHh--hcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEeccc--CcEeeccchhHH
Confidence 34579999999999887743 33322333333 22222 2788899999999999999999976 999999999877
Q ss_pred ccC
Q 002927 204 KLS 206 (864)
Q Consensus 204 ~l~ 206 (864)
.+.
T Consensus 224 km~ 226 (1317)
T KOG0612|consen 224 KMD 226 (1317)
T ss_pred hcC
Confidence 765
No 314
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.14 E-value=2e-10 Score=122.92 Aligned_cols=140 Identities=19% Similarity=0.247 Sum_probs=97.9
Q ss_pred cccccccceeeEEEEec-----CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 11 TPLATASIAQVHRATLV-----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-----~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
+-||.|++|.||+|+++ .+..|+||+..+...... .-+|
T Consensus 5 ~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~------------------------------------~~~~ 48 (259)
T PF07714_consen 5 KQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEE------------------------------------EEEF 48 (259)
T ss_dssp EEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHH------------------------------------HHHH
T ss_pred eEEccCCCcEEEEEEEEcccCCCCEEEEEEEecccccccc------------------------------------ceee
Confidence 46999999999999986 267899999876433221 1124
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHh-hcCCCHHHHHHHHHH
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITR 163 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~l~~~~~~ 163 (864)
.+|++.+.++++. .-+.+-.+.. .....+||||+++.+|.+..... ....+...+...+.+
T Consensus 49 ~~e~~~l~~l~h~-----------------ni~~~~g~~~~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~ 111 (259)
T PF07714_consen 49 LNEIQILRKLRHP-----------------NIVKLYGFCIENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQ 111 (259)
T ss_dssp HHHHHHHHTHSBT-----------------TBE-EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHH
T ss_pred eeccccccccccc-----------------cccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4566666665321 1122222222 45678999999999999886543 345666666666666
Q ss_pred HH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 164 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 164 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+. +..+|..+++|+|++|.||+++.+ +.++|.|||+....
T Consensus 112 i~~~l~~Lh~~~iiH~~l~~~nill~~~--~~~Kl~~f~~~~~~ 153 (259)
T PF07714_consen 112 IAEALSYLHSNNIIHGNLSPSNILLDSN--GQVKLSDFGLSRPI 153 (259)
T ss_dssp HHHHHHHHHHTTEEEST-SGGGEEEETT--TEEEEESTTTGEET
T ss_pred cccccccccccccccccccccccccccc--cccccccccccccc
Confidence 55 888999999999999999999965 89999999998876
No 315
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.14 E-value=1.5e-10 Score=126.41 Aligned_cols=138 Identities=14% Similarity=0.182 Sum_probs=93.6
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|.||+|+.. +|+.|+||.......... -.+.+|+
T Consensus 26 ~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~-------------------------------------~~~~~e~ 68 (296)
T cd06654 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK-------------------------------------ELIINEI 68 (296)
T ss_pred EEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchH-------------------------------------HHHHHHH
Confidence 46999999999999965 799999997643221100 0133344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCE-EEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v-~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
..+..+. ++++ .+...+. ....++||||++|.+|.++.. ........+...+.++.
T Consensus 69 ~~l~~~~------------------h~~v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~i~~ql~~a 128 (296)
T cd06654 69 LVMRENK------------------NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT--ETCMDEGQIAAVCRECLQA 128 (296)
T ss_pred HHHHhCC------------------CCCEeeEEEEEEeCCEEEEeecccCCCCHHHHHH--hcCCCHHHHHHHHHHHHHH
Confidence 4443332 1222 1112222 456889999999999988753 23345555555444443
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 129 L~~LH~~gi~H~dLkp~Nill~~~--~~~kl~dfg~~~~~~~ 168 (296)
T cd06654 129 LEFLHSNQVIHRDIKSDNILLGMD--GSVKLTDFGFCAQITP 168 (296)
T ss_pred HHHHHHCCcccCCCCHHHEEEcCC--CCEEECccccchhccc
Confidence 678899999999999999999865 8999999998876544
No 316
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.14 E-value=2.6e-10 Score=123.71 Aligned_cols=140 Identities=15% Similarity=0.153 Sum_probs=93.6
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|.||++..+ +++.||+|+........ .+-++.+|.
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~------------------------------------~~~~~~~e~ 50 (287)
T cd06621 7 SRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPD------------------------------------LQKQILREL 50 (287)
T ss_pred EEeccCCceEEEEEEECCCCeEEEEEEEecCCchH------------------------------------HHHHHHHHH
Confidence 67999999999999986 78999999876432211 011134455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCE-EEeeEEe---cCCceEEEeecCCcCCCChHHHh---hcCCCHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ---SSETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEIT 162 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v-~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~~---~~~~~~~~l~~~~~ 162 (864)
+.+.++.+ +.+ .+...+. ....+|||||++|.+|.++.... ........+...+.
T Consensus 51 ~~l~~l~h------------------~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~ 112 (287)
T cd06621 51 EINKSCKS------------------PYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAE 112 (287)
T ss_pred HHHHhCCC------------------CCeeeeeeEEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHH
Confidence 55555432 222 2222222 23568999999999998764321 11233344444444
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++..+.
T Consensus 113 ~i~~~L~~lH~~~i~H~dl~~~nil~~~~--~~~~l~dfg~~~~~~ 156 (287)
T cd06621 113 SVLKGLSYLHSRKIIHRDIKPSNILLTRK--GQVKLCDFGVSGELV 156 (287)
T ss_pred HHHHHHHHHHHCCcccCCCCHHHEEEecC--CeEEEeecccccccc
Confidence 333 678899999999999999999865 789999999987654
No 317
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.14 E-value=2.5e-10 Score=120.65 Aligned_cols=141 Identities=19% Similarity=0.164 Sum_probs=97.5
Q ss_pred ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 10 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
.+.|+.|++|.||+|+.. +|+.|+||+.+...... ... + .+.+|
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~---------------------------~------~~~~e 49 (260)
T cd06606 5 GELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSE--EEL---------------------------E------ALERE 49 (260)
T ss_pred eeEeeecCceEEEEEEECCCCcEEEEEEeeccccch--HHH---------------------------H------HHHHH
Confidence 378999999999999987 79999999876443210 000 0 12334
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-c--CCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-S--SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 162 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~--~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~ 162 (864)
...+.++.+ + .+.+++ . . ...+++|||++|.+|.++.... ...+...+...+.
T Consensus 50 ~~~l~~l~~------------------~--~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~ 108 (260)
T cd06606 50 IRILSSLQH------------------P--NIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKF-GKLPEPVIRKYTR 108 (260)
T ss_pred HHHHHHcCC------------------C--CEeeEEEEEecCCCCeEEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHH
Confidence 444444421 1 122222 2 3 5678999999999998875432 2455555555444
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+++ +..+|+.|++|+|++|.||+++.+ +.++|+|||++......
T Consensus 109 ~l~~~l~~lh~~~~~h~dl~p~ni~i~~~--~~~~l~d~~~~~~~~~~ 154 (260)
T cd06606 109 QILEGLAYLHSNGIVHRDIKGANILVDSD--GVVKLADFGCAKRLGDI 154 (260)
T ss_pred HHHHHHHHHHHCCccccCCCHHHEEEcCC--CCEEEcccccEEecccc
Confidence 444 778899999999999999999964 89999999998877654
No 318
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.14 E-value=1.5e-10 Score=125.49 Aligned_cols=137 Identities=20% Similarity=0.230 Sum_probs=90.4
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|+||+|+.. +|+.||+|+.......... + ++.+|.
T Consensus 11 ~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~------------------------------~------~~~~E~ 54 (284)
T cd06620 11 SDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVR------------------------------K------QILREL 54 (284)
T ss_pred HHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHH------------------------------H------HHHHHH
Confidence 57999999999999976 7999999987643221111 1 123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+..+++ + .+.+++. ....+|||||++|.+|.++.... .......+...+.++.
T Consensus 55 ~~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~ 113 (284)
T cd06620 55 QIMHECRS------------------P--YIVSFYGAFLNENNICMCMEFMDCGSLDRIYKKG-GPIPVEILGKIAVAVV 113 (284)
T ss_pred HHHHHcCC------------------C--CcceEeeeEecCCEEEEEEecCCCCCHHHHHHhc-cCCCHHHHHHHHHHHH
Confidence 44444322 1 1222221 46678999999999998764321 2233333333333322
Q ss_pred --HHHHHh-cCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 --AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 --l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|. .|++|+|++|.||+++.+ ++++|+|||++..+.
T Consensus 114 ~~l~~LH~~~~i~H~dl~p~nil~~~~--~~~~l~d~gl~~~~~ 155 (284)
T cd06620 114 EGLTYLYNVHRIMHRDIKPSNILVNSR--GQIKLCDFGVSGELI 155 (284)
T ss_pred HHHHHHHHhcCeeccCCCHHHEEECCC--CcEEEccCCcccchh
Confidence 567775 699999999999999865 899999999986553
No 319
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.14 E-value=1.9e-10 Score=128.93 Aligned_cols=139 Identities=18% Similarity=0.290 Sum_probs=88.3
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.. +|+.||||+........-. ...+.+|.
T Consensus 22 ~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~-----------------------------------~~~~~~E~ 66 (353)
T cd07850 22 KPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTH-----------------------------------AKRAYREL 66 (353)
T ss_pred EEeccCCCEEEEEEEECCCCCEEEEEecCccccChhH-----------------------------------HHHHHHHH
Confidence 78999999999999976 8999999975321110000 00122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-------cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 162 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~ 162 (864)
..+.++.+.. -+.+...+. ....+|||||++| +|.+... ...+...+...+.
T Consensus 67 ~~l~~l~h~~-----------------iv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~---~~l~~~~~~~~~~ 125 (353)
T cd07850 67 VLMKLVNHKN-----------------IIGLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVIQ---MDLDHERMSYLLY 125 (353)
T ss_pred HHHHhcCCCC-----------------CcceeeeeccCCCccccCcEEEEEeccCC-CHHHHHh---hcCCHHHHHHHHH
Confidence 4444442210 111111111 1235899999986 4444322 1245555444444
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+++ +..+|..|++|+|+||+||+++.+ +.++|+|||++..+..
T Consensus 126 ql~~aL~~LH~~gi~H~dlkp~Nil~~~~--~~~kL~Dfg~~~~~~~ 170 (353)
T cd07850 126 QMLCGIKHLHSAGIIHRDLKPSNIVVKSD--CTLKILDFGLARTAGT 170 (353)
T ss_pred HHHHHHHHHHhCCeeeCCCCHHHEEECCC--CCEEEccCccceeCCC
Confidence 443 788999999999999999999865 8999999999886653
No 320
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.14 E-value=2.5e-10 Score=122.18 Aligned_cols=140 Identities=15% Similarity=0.114 Sum_probs=92.9
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHH-HHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTII-LEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~-~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
+-|++|++|.||+|+.+ +|+.||||+.+......- ...+ -.+.+|
T Consensus 8 ~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~---------------------------------~~~~~E 54 (265)
T cd06652 8 KLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEV---------------------------------NALECE 54 (265)
T ss_pred eEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHH---------------------------------HHHHHH
Confidence 67999999999999976 799999997653211100 0000 014456
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---c---CCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---S---SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 162 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~---~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~ 162 (864)
+..+.++.+ +. +++++. . ...+++|||++|.+|.+..... ...+...+...+.
T Consensus 55 ~~~l~~l~h------------------~~--i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ 113 (265)
T cd06652 55 IQLLKNLLH------------------ER--IVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSY-GALTENVTRKYTR 113 (265)
T ss_pred HHHHHhcCC------------------CC--eeeEEeEeccCCCceEEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHH
Confidence 666665532 11 222222 1 2356899999999998875422 2234444444333
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
++. +..+|+.|++|+|++|.||+++.+ +.++|+|||++..+.
T Consensus 114 ~l~~~l~~lH~~~i~H~dl~p~nil~~~~--~~~~l~Dfg~~~~~~ 157 (265)
T cd06652 114 QILEGVSYLHSNMIVHRDIKGANILRDSV--GNVKLGDFGASKRLQ 157 (265)
T ss_pred HHHHHHHHHHhCCEecCCCCHHHEEecCC--CCEEECcCccccccc
Confidence 333 778899999999999999999865 899999999887653
No 321
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.14 E-value=8.3e-11 Score=127.19 Aligned_cols=139 Identities=20% Similarity=0.232 Sum_probs=92.3
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|+||+|+.+ +|+.||||+........ ...+ ++.+|.
T Consensus 7 ~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~-----------------------------~~~~------~~~~e~ 51 (286)
T cd07846 7 GLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDK-----------------------------MVKK------IAMREI 51 (286)
T ss_pred eeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcc-----------------------------hhhH------HHHHHH
Confidence 67999999999999986 69999999743221110 0000 122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+.++.+ ..+++++. ....++||||++|..+.++... ....+...+...+.+++
T Consensus 52 ~~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~i~ 110 (286)
T cd07846 52 RMLKQLRH--------------------ENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKY-PNGLDESRVRKYLFQIL 110 (286)
T ss_pred HHHHhcCC--------------------cchhhHHHhcccCCeEEEEEecCCccHHHHHHhc-cCCCCHHHHHHHHHHHH
Confidence 33333221 11222221 3457899999999888765432 22355666666555544
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|++|.||+++++ +.++|+|||++..+..
T Consensus 111 ~~l~~LH~~~i~h~~l~p~ni~~~~~--~~~~l~dfg~~~~~~~ 152 (286)
T cd07846 111 RGIEFCHSHNIIHRDIKPENILVSQS--GVVKLCDFGFARTLAA 152 (286)
T ss_pred HHHHHHHHCCccccCCCHHHEEECCC--CcEEEEeeeeeeeccC
Confidence 778899999999999999999865 8999999999877644
No 322
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.14 E-value=2.2e-10 Score=124.45 Aligned_cols=142 Identities=20% Similarity=0.241 Sum_probs=94.0
Q ss_pred cccccccceeeEEEEecC------CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 11 TPLATASIAQVHRATLVD------GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~------G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
+.||.|++|.||+|..+. ...||+|+.+....... ..+
T Consensus 18 ~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~------------------------------------~~~ 61 (293)
T cd05053 18 KPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKD------------------------------------LSD 61 (293)
T ss_pred eEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHH------------------------------------HHH
Confidence 689999999999999642 36899998765432110 011
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhh-------------
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA------------- 149 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~------------- 149 (864)
+.+|+..+.++.. ++. +.+..++. ....+++|||++|.+|.++.....
T Consensus 62 ~~~E~~~l~~l~~-----------------h~~i~~~~~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 124 (293)
T cd05053 62 LVSEMEMMKMIGK-----------------HKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRP 124 (293)
T ss_pred HHHHHHHHHhhcC-----------------CCCeeeEEEEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccc
Confidence 3345544444421 111 22233333 456789999999999987754211
Q ss_pred --cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 150 --FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 150 --~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
...+...+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 125 ~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~--~~~kL~Dfg~~~~~~~ 184 (293)
T cd05053 125 PEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTED--HVMKIADFGLARDIHH 184 (293)
T ss_pred cccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCC--CeEEeCcccccccccc
Confidence 1233444444444433 788899999999999999999865 8999999999886543
No 323
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.14 E-value=2.3e-10 Score=123.02 Aligned_cols=140 Identities=17% Similarity=0.152 Sum_probs=96.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|.||+|+.. +|+.||||+........ + .-++.+|.
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~---~---------------------------------~~~~~~e~ 50 (274)
T cd06609 7 ECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAED---E---------------------------------IEDIQQEI 50 (274)
T ss_pred hhhcCCCCeEEEEEEECCCCeEEEEEEeeccccch---H---------------------------------HHHHHHHH
Confidence 67999999999999976 79999999864321100 0 00133454
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCE-EEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v-~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
+.+..+.+ +.+ .+...+. ....++||||++|.+|.++... ...+...+...+.+++
T Consensus 51 ~~l~~l~h------------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~ 110 (274)
T cd06609 51 QFLSQCRS------------------PYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKP--GKLDETYIAFILREVLLG 110 (274)
T ss_pred HHHHHcCC------------------CCeeeeeEEEEECCeEEEEEEeeCCCcHHHHHhh--cCCCHHHHHHHHHHHHHH
Confidence 44444432 122 1112222 5667899999999999877542 2455555555555544
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+...
T Consensus 111 l~~lh~~~i~h~dl~p~ni~i~~~--~~~~l~d~g~~~~~~~~ 151 (274)
T cd06609 111 LEYLHEEGKIHRDIKAANILLSEE--GDVKLADFGVSGQLTST 151 (274)
T ss_pred HHHHHhCCcccCCCCHHHEEECCC--CCEEEcccccceeeccc
Confidence 677899999999999999999865 89999999999887653
No 324
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.13 E-value=2.1e-10 Score=122.73 Aligned_cols=143 Identities=14% Similarity=0.111 Sum_probs=93.3
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|+.|++|.||+|+.+ +|+.||+|+.......... . + ....+.+|+
T Consensus 8 ~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~--~------------------------~------~~~~~~~ei 55 (264)
T cd06653 8 KLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQET--S------------------------K------EVNALECEI 55 (264)
T ss_pred eeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchh--h------------------------H------HHHHHHHHH
Confidence 68999999999999975 7999999986432211000 0 0 001244566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe---cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..+.++++ +. +.+..... ....+++|||++|.+|.+..... ...+...+...+.++.
T Consensus 56 ~~l~~l~h------------------~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~ 116 (264)
T cd06653 56 QLLKNLRH------------------DRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAY-GALTENVTRRYTRQIL 116 (264)
T ss_pred HHHHHcCC------------------CCcceEEEEEEcCCCCEEEEEEEeCCCCcHHHHHHHc-CCCCHHHHHHHHHHHH
Confidence 65555532 11 11222222 23467999999999998765321 2234444433333332
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|+|++|+||+++.+ +.++|+|||++..+.
T Consensus 117 ~al~~LH~~~i~H~dl~p~ni~i~~~--~~~~l~dfg~~~~~~ 157 (264)
T cd06653 117 QGVSYLHSNMIVHRDIKGANILRDSA--GNVKLGDFGASKRIQ 157 (264)
T ss_pred HHHHHHHhCCEecCCCCHHHEEEcCC--CCEEECccccccccc
Confidence 678899999999999999999864 889999999988653
No 325
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.13 E-value=2.8e-10 Score=131.99 Aligned_cols=77 Identities=18% Similarity=0.237 Sum_probs=54.7
Q ss_pred CCceEEEeecCCcCCCChHHHhhc-----------------------CCCHHHHHHHHHHH--HHHHHHhcCeeccCCCC
Q 002927 127 SETVLILEFMDGIRLNDCESLEAF-----------------------GVNKQKVVEEITRA--YAHQIYVDGFFNGDPHP 181 (864)
Q Consensus 127 ~~~vLvmE~i~G~~L~~~~~~~~~-----------------------~~~~~~l~~~~~~~--~l~~i~~~G~~H~D~hP 181 (864)
...+|||||+++.+|.++...... ..+...+...+.++ .+..+|..|++|||+||
T Consensus 258 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp 337 (507)
T PLN03224 258 GSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKP 337 (507)
T ss_pred CceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCch
Confidence 457899999999999887542110 01111222222222 27788999999999999
Q ss_pred CCeEEccCCCCceEEEeccccccc
Q 002927 182 GNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 182 gNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+|||++.+ +.++|+|||++..+
T Consensus 338 ~NILl~~~--~~~kL~DFGla~~~ 359 (507)
T PLN03224 338 ENLLVTVD--GQVKIIDFGAAVDM 359 (507)
T ss_pred HhEEECCC--CcEEEEeCcCcccc
Confidence 99999865 89999999998654
No 326
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.13 E-value=2e-10 Score=122.12 Aligned_cols=140 Identities=19% Similarity=0.204 Sum_probs=92.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|.||+|... +|+.||+|+......... + .+ .+..|.
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~--~---------------------------~~------~~~~e~ 50 (265)
T cd08217 6 ETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEK--E---------------------------KQ------QLVSEV 50 (265)
T ss_pred eeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHH--H---------------------------HH------HHHHHH
Confidence 67999999999999965 789999998653211100 0 00 122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe------cCCceEEEeecCCcCCCChHHHh---hcCCCHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ------SSETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEE 160 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~------~~~~vLvmE~i~G~~L~~~~~~~---~~~~~~~~l~~~ 160 (864)
..+.++++ + .+.+++. ....+++|||++|.+|.++.... ....+...+...
T Consensus 51 ~~l~~l~~------------------~--~i~~~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~ 110 (265)
T cd08217 51 NILRELKH------------------P--NIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRI 110 (265)
T ss_pred HHHHhcCC------------------C--ccceeeeeeecCCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHH
Confidence 44444322 1 1222221 23357999999999998875432 123444555554
Q ss_pred HHHHH--HHHHH-----hcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 161 ITRAY--AHQIY-----VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 161 ~~~~~--l~~i~-----~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+.+++ +..+| ..|++|+|+||+||+++.+ +.++|+|||++..+..
T Consensus 111 ~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~--~~~kl~d~g~~~~~~~ 162 (265)
T cd08217 111 LTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDAN--NNVKLGDFGLAKILGH 162 (265)
T ss_pred HHHHHHHHHHHhcCccccCcceecCCCHHHEEEecC--CCEEEecccccccccC
Confidence 44443 67889 8899999999999999865 8999999999887754
No 327
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.13 E-value=1.1e-10 Score=140.91 Aligned_cols=141 Identities=19% Similarity=0.193 Sum_probs=93.3
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+-+|.||+|+||+|+..+|+.|||||++|-..-.+-.=.+++.+| . ..+..
T Consensus 704 ~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEfYI~~q~~~RL----------------------------k-~~~~~ 754 (974)
T KOG1166|consen 704 KEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEFYICLQVMERL----------------------------K-PQMLP 754 (974)
T ss_pred eeeccccceEEEEeecCCCcEEEEEeecCCCceeeeehHHHHHhh----------------------------c-hhhhc
Confidence 569999999999999888999999999987653332222221111 1 01111
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQ 168 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~ 168 (864)
.+..+...+. ..+..+||+||.+=++|-|+.. .....+..-++-..++++ +++
T Consensus 755 ~~~~~~~a~~------------------------~~~~S~lv~ey~~~Gtlld~~N-~~~~m~e~lv~~~~~qml~ive~ 809 (974)
T KOG1166|consen 755 SIMHISSAHV------------------------FQNASVLVSEYSPYGTLLDLIN-TNKVMDEYLVMFFSCQMLRIVEH 809 (974)
T ss_pred chHHHHHHHc------------------------cCCcceeeeeccccccHHHhhc-cCCCCCchhhhHHHHHHHHHHHH
Confidence 1111211110 1456689999999999998865 223344444444444444 899
Q ss_pred HHhcCeeccCCCCCCeEEccCC-----CCceEEEeccccccc
Q 002927 169 IYVDGFFNGDPHPGNFLVSKDP-----PHRPILLDFGLTKKL 205 (864)
Q Consensus 169 i~~~G~~H~D~hPgNIlv~~~~-----~g~i~LiDFG~~~~l 205 (864)
+|..||||+||||.|+|++... ..-|+|||||.+-.+
T Consensus 810 lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm 851 (974)
T KOG1166|consen 810 LHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDM 851 (974)
T ss_pred HHhcceecccCCcceeEeecccCCCCcccceEEEecccceee
Confidence 9999999999999999997431 235899999986544
No 328
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.13 E-value=2.5e-10 Score=123.78 Aligned_cols=139 Identities=18% Similarity=0.194 Sum_probs=91.7
Q ss_pred cccccccceeeEEEEec------CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 11 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 11 ~plasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
+.||.|++|+||+|+.+ ++..||||+.+.+...... -+
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~------------------------------------~~ 54 (288)
T cd05050 11 RDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQ------------------------------------AD 54 (288)
T ss_pred ccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHH------------------------------------HH
Confidence 67999999999999863 4789999987654321111 01
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhh-------------
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA------------- 149 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~------------- 149 (864)
+.+|+..+.++.+ +. +.+..... ....+++|||++|.+|.++.....
T Consensus 55 ~~~ei~~l~~l~h------------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 116 (288)
T cd05050 55 FQREAALMAEFDH------------------PNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSS 116 (288)
T ss_pred HHHHHHHHHhcCC------------------CchheEEEEEcCCCccEEEEecCCCCCHHHHHHHcCccccccccccccc
Confidence 3345544444322 11 12222222 345789999999999987754211
Q ss_pred --------cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 150 --------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 150 --------~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
.......+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+
T Consensus 117 ~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~--~~~~l~dfg~~~~~ 180 (288)
T cd05050 117 ARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGEN--MVVKIADFGLSRNI 180 (288)
T ss_pred cccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEecCC--CceEECccccceec
Confidence 1123333444444433 678899999999999999999865 89999999987654
No 329
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.13 E-value=9.1e-11 Score=141.80 Aligned_cols=138 Identities=20% Similarity=0.233 Sum_probs=108.1
Q ss_pred cccccccceeeEEEEec--CCC----EEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 11 TPLATASIAQVHRATLV--DGR----QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 11 ~plasaSigqV~~A~l~--~G~----~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
+.||.|.||.||+|+.. +|. .||||.+++.... .++.|
T Consensus 698 ~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~------------------------------------~~~~~ 741 (1025)
T KOG1095|consen 698 RVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSE------------------------------------QEVSD 741 (1025)
T ss_pred eeeccccccceEEEEEecCCCCccceEEEEEeccccCCH------------------------------------HHHHH
Confidence 78999999999999976 454 3888876654332 24567
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE----ecCCceEEEeecCCcCCCChHHHh------hcCCCH
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI----QSSETVLILEFMDGIRLNDCESLE------AFGVNK 154 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~----~~~~~vLvmE~i~G~~L~~~~~~~------~~~~~~ 154 (864)
|.+||..+..|.| ++| -+.+ .....+|++||++|++|..+++.. ...+..
T Consensus 742 Fl~Ea~~m~~f~H------------------pNi--v~liGv~l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~ 801 (1025)
T KOG1095|consen 742 FLKEALLMSKFDH------------------PNI--VSLIGVCLDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSM 801 (1025)
T ss_pred HHHHHHHHhcCCC------------------cce--eeEEEeecCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCH
Confidence 9999999998854 222 2222 167789999999999999987654 445667
Q ss_pred HHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 155 QKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 155 ~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.+++...+++. ++++.+.+||||||-..|.|++.. ..+++.||||++.+.
T Consensus 802 ~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~--r~VKIaDFGlArDiy 853 (1025)
T KOG1095|consen 802 RDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDER--RVVKIADFGLARDIY 853 (1025)
T ss_pred HHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeeccc--CcEEEcccchhHhhh
Confidence 78888877776 888999999999999999999975 789999999998543
No 330
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.13 E-value=1.7e-10 Score=127.86 Aligned_cols=140 Identities=15% Similarity=0.283 Sum_probs=95.8
Q ss_pred ccccccccceeeEEEEecC--CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHH
Q 002927 10 ETPLATASIAQVHRATLVD--GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 87 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~~--G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~ 87 (864)
.+.||+|+||+||.+...+ .+.+|+|+........- . .+..
T Consensus 23 ~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~------------------------------------~-~l~~ 65 (322)
T KOG1164|consen 23 GKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP------------------------------------S-VLKI 65 (322)
T ss_pred eeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC------------------------------------c-cchh
Confidence 3689999999999999764 35899998654221100 0 0122
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEec-----CCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHH
Q 002927 88 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS-----SETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEI 161 (864)
Q Consensus 88 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~-----~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~ 161 (864)
|...+..+... ....++|.++.. .-+++||+.+ |.+|.++..... ..+.....+...
T Consensus 66 E~~vl~~l~~~----------------~~~~~~~~~~~~G~~~~~~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia 128 (322)
T KOG1164|consen 66 EIQVLKKLEKK----------------NGPSHFPKLLDHGRSTEDFNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIA 128 (322)
T ss_pred HHHHHHHHhhh----------------cCCCCCCEEEEeccCCCceeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHH
Confidence 33333333220 112456777652 2468999987 899998764333 456677777777
Q ss_pred HHHH--HHHHHhcCeeccCCCCCCeEEccCC-C--CceEEEeccccc
Q 002927 162 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDP-P--HRPILLDFGLTK 203 (864)
Q Consensus 162 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~-~--g~i~LiDFG~~~ 203 (864)
++.+ ++.+|+.||+|||+||+|+++.... . ..+.|+|||+++
T Consensus 129 ~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar 175 (322)
T KOG1164|consen 129 IQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLAR 175 (322)
T ss_pred HHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCc
Confidence 7766 9999999999999999999998542 1 468999999998
No 331
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.13 E-value=1.7e-10 Score=124.49 Aligned_cols=143 Identities=16% Similarity=0.204 Sum_probs=94.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|+||+|+.. +|+.||||+.+...... + ...++.+|+
T Consensus 5 ~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~-----------------------------~------~~~~~~~e~ 49 (287)
T cd07840 5 AQIGEGTYGQVYKARNKKTGELVALKKIRMENEKE-----------------------------G------FPITAIREI 49 (287)
T ss_pred EEeccCCCeEEEEEEECCCCeEEEEEEEecccccc-----------------------------c------chHHHHHHH
Confidence 56899999999999976 68999999877543100 0 001233455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-c--CCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH-
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S--SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~--~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~- 165 (864)
..+.++.+. .-+.+..++. . ...+|||||+++ +|.++........+...+...+.+++
T Consensus 50 ~~l~~l~~~-----------------~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~ 111 (287)
T cd07840 50 KLLQKLRHP-----------------NIVRLKEIVTSKGKGSIYMVFEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLE 111 (287)
T ss_pred HHHHhccCC-----------------CeeeheeeEecCCCCcEEEEeccccc-cHHHHHhccCCCCCHHHHHHHHHHHHH
Confidence 555554321 0112222222 3 568899999986 66555332222455555555444443
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+..+|..|++|+|++|.||+++++ +.++|+|||++..+...
T Consensus 112 al~~LH~~~~~h~dl~p~nil~~~~--~~~~l~d~g~~~~~~~~ 153 (287)
T cd07840 112 GLQYLHSNGILHRDIKGSNILINND--GVLKLADFGLARPYTKR 153 (287)
T ss_pred HHHHHHHCCceeccCcHHHeEEcCC--CCEEEccccceeeccCC
Confidence 778899999999999999999965 89999999998877554
No 332
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.13 E-value=2.8e-10 Score=121.38 Aligned_cols=80 Identities=14% Similarity=0.217 Sum_probs=59.3
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
.+..+++|||+.|.+|.++............+...+.++. +..+|..|++|+|++|.||+++.+ +.++|+|||++.
T Consensus 69 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~--~~~kl~dfg~~~ 146 (262)
T cd05058 69 EGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDES--FTVKVADFGLAR 146 (262)
T ss_pred CCCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCC--CcEEECCccccc
Confidence 3457899999999999887543222234444444333333 678899999999999999999865 889999999987
Q ss_pred ccCh
Q 002927 204 KLSS 207 (864)
Q Consensus 204 ~l~~ 207 (864)
.+..
T Consensus 147 ~~~~ 150 (262)
T cd05058 147 DIYD 150 (262)
T ss_pred cccC
Confidence 6543
No 333
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.12 E-value=1.2e-10 Score=127.08 Aligned_cols=142 Identities=18% Similarity=0.171 Sum_probs=91.6
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|+||+|+.+ +|+.||||+.+......- .+.++.+|.
T Consensus 13 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~-----------------------------------~~~~~~~e~ 57 (302)
T cd07864 13 GQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEG-----------------------------------FPITAIREI 57 (302)
T ss_pred eeecccCCEEEEEEEECCCCcEEEEEEEeecccccC-----------------------------------chHHHHHHH
Confidence 68999999999999986 799999998764321100 011233444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-----------cCCceEEEeecCCcCCCChHHHhhcCCCHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-----------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVV 158 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-----------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~ 158 (864)
+.+.++++.. -+.+..++. ....+|+|||++| .+.+.........+...+.
T Consensus 58 ~~~~~l~h~~-----------------i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~ 119 (302)
T cd07864 58 KILRQLNHRN-----------------IVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIK 119 (302)
T ss_pred HHHHhCCCCC-----------------eeeeeheecCcchhhhccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHH
Confidence 4444443210 011111111 1256899999997 4433322122235555555
Q ss_pred HHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 159 EEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 159 ~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+.+++ +..+|..|++|+|+||+||+++.+ +.++|+|||.+..+..
T Consensus 120 ~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~--~~~kl~dfg~~~~~~~ 168 (302)
T cd07864 120 SFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNK--GQIKLADFGLARLYNS 168 (302)
T ss_pred HHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC--CcEEeCcccccccccC
Confidence 5555544 788999999999999999999865 8999999999887654
No 334
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.12 E-value=1.4e-10 Score=128.97 Aligned_cols=152 Identities=13% Similarity=0.122 Sum_probs=95.1
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+........... .........+.++.+|.
T Consensus 15 ~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~E~ 71 (335)
T PTZ00024 15 AHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKD-----------------------RQLVGMCGIHFTTLREL 71 (335)
T ss_pred hcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccc-----------------------hhhhcccccchhHHHHH
Confidence 57999999999999976 7999999987542211100000 00000001122345566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
+.+.++.+. .-+.+...+. ....+++|||++| +|.+... .........+...+.+++ +
T Consensus 72 ~~l~~l~h~-----------------~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~-~~~~~~~~~~~~~~~ql~~aL 132 (335)
T PTZ00024 72 KIMNEIKHE-----------------NIMGLVDVYVEGDFINLVMDIMAS-DLKKVVD-RKIRLTESQVKCILLQILNGL 132 (335)
T ss_pred HHHHhCCCc-----------------ceeeeeEEEecCCcEEEEEecccc-CHHHHHH-hcCCCCHHHHHHHHHHHHHHH
Confidence 655555321 0122222222 4567899999986 5655532 222345555555444444 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..+|..|++|+|++|+||+++.+ +.++|+|||++..+.
T Consensus 133 ~~LH~~~i~H~dl~~~nill~~~--~~~kl~dfg~~~~~~ 170 (335)
T PTZ00024 133 NVLHKWYFMHRDLSPANIFINSK--GICKIADFGLARRYG 170 (335)
T ss_pred HHHHhCCeecccccHHHeEECCC--CCEEECCccceeecc
Confidence 88999999999999999999865 899999999987654
No 335
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.12 E-value=3.6e-10 Score=125.28 Aligned_cols=140 Identities=14% Similarity=0.136 Sum_probs=92.0
Q ss_pred cccccc--cceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHH
Q 002927 11 TPLATA--SIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 87 (864)
Q Consensus 11 ~plasa--SigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~ 87 (864)
+-||.| +++.||+++.+ +|+.||||+.+...... +..+. +.+
T Consensus 4 ~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~-----------------------------~~~~~------~~~ 48 (327)
T cd08227 4 TVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTN-----------------------------EMVTF------LQG 48 (327)
T ss_pred hhccccccceEEEEEEeecccCcEEEEEEechhhccH-----------------------------HHHHH------HHH
Confidence 347888 88999999976 89999999765322100 00011 223
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCE-EEeeEEe-cCCceEEEeecCCcCCCChHHHh-hcCCCHHHHHHHHHHH
Q 002927 88 EAENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRA 164 (864)
Q Consensus 88 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v-~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~l~~~~~~~ 164 (864)
|.+.++.+. ++++ .+-..+. ....++||||++|.+|.++.... ..+++...+...+.++
T Consensus 49 e~~~l~~l~------------------hpniv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi 110 (327)
T cd08227 49 ELHVSKLFN------------------HPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGV 110 (327)
T ss_pred HHHHHHhcC------------------CCCeeeEEEEEEECCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHH
Confidence 444333332 2222 1222222 56688999999999998876432 2235555555555544
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+ +..+|..|++|+|+||.||+++.+ +++++.|||....+
T Consensus 111 ~~~L~~LH~~~iiH~dlkp~Nil~~~~--~~~~l~~~~~~~~~ 151 (327)
T cd08227 111 LKALDYIHHMGYVHRSVKASHILISVD--GKVYLSGLRSNLSM 151 (327)
T ss_pred HHHHHHHHHCCEecCCCChhhEEEecC--CcEEEcccchhhcc
Confidence 4 788999999999999999999865 88999999865443
No 336
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.12 E-value=3.6e-10 Score=121.39 Aligned_cols=77 Identities=14% Similarity=0.172 Sum_probs=55.3
Q ss_pred cCCceEEEeecCCcCCCChHHHhhc---CCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAF---GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFG 200 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~---~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG 200 (864)
....+|||||++|.+|.++...... ......+...+.++. +..+|+.|++|+|+||.|||++.+ +.++|+|||
T Consensus 67 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~--~~~~l~Dfg 144 (268)
T cd05086 67 AIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSD--LTVKVGDYG 144 (268)
T ss_pred CCccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCC--ccEEecccc
Confidence 3457899999999999887543211 112222223233322 678899999999999999999865 889999999
Q ss_pred cccc
Q 002927 201 LTKK 204 (864)
Q Consensus 201 ~~~~ 204 (864)
++..
T Consensus 145 ~~~~ 148 (268)
T cd05086 145 IGPS 148 (268)
T ss_pred cccc
Confidence 8754
No 337
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.12 E-value=2.6e-10 Score=122.68 Aligned_cols=138 Identities=17% Similarity=0.209 Sum_probs=93.3
Q ss_pred cccccccceeeEEEEecC------CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 11 TPLATASIAQVHRATLVD------GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~------G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
+.||.|++|.||+|..++ +..||||+...+.... ....
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~------------------------------------~~~~ 55 (277)
T cd05032 12 RELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMR------------------------------------ERIE 55 (277)
T ss_pred eEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHH------------------------------------HHHH
Confidence 679999999999999752 4789999865432110 0112
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhc---------C
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAF---------G 151 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~---------~ 151 (864)
+.+|+..+.++.+ + .+.+++. ....+++|||++|.+|.++...... .
T Consensus 56 ~~~e~~~l~~~~~------------------~--~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 115 (277)
T cd05032 56 FLNEASVMKEFNC------------------H--HVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGP 115 (277)
T ss_pred HHHHHHHHHhCCC------------------C--ceeEEEEEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCC
Confidence 4445555544322 1 2233432 5668999999999999887542111 1
Q ss_pred CCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 152 VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 152 ~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.....+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||+++.+.
T Consensus 116 ~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~--~~~kl~dfg~~~~~~ 170 (277)
T cd05032 116 PTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAED--LTVKIGDFGMTRDIY 170 (277)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCC--CCEEECCcccchhhc
Confidence 23344444444443 778999999999999999999865 899999999987653
No 338
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.12 E-value=4.2e-10 Score=122.16 Aligned_cols=137 Identities=22% Similarity=0.230 Sum_probs=93.3
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|.||+|... +|+.|+||+.+-..... .+ .+.+|+
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~-------------------------------~~------~~~~e~ 67 (285)
T cd06648 25 VKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQR-------------------------------RE------LLFNEV 67 (285)
T ss_pred eEeccCCCeEEEEEEECCCCCEEEEEEEeccchhH-------------------------------HH------HHHHHH
Confidence 68999999999999965 79999999753111100 00 022344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
..+.++.+ +. +.+...+. ....+++|||++|.+|.+.... ...+...+...+.+++
T Consensus 68 ~~l~~~~h------------------~~vv~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~ 127 (285)
T cd06648 68 VIMRDYQH------------------PNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIATVCLAVLKA 127 (285)
T ss_pred HHHHHcCC------------------CChheEEEEEEcCCeEEEEEeccCCCCHHHHHHh--CCCCHHHHHHHHHHHHHH
Confidence 43333321 11 22222222 5667899999999999887542 3455555555555444
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+.
T Consensus 128 l~~lH~~~i~H~dl~p~Nil~~~~--~~~~l~d~g~~~~~~ 166 (285)
T cd06648 128 LSFLHAQGVIHRDIKSDSILLTSD--GRVKLSDFGFCAQVS 166 (285)
T ss_pred HHHHHhCCeecCCCChhhEEEcCC--CcEEEcccccchhhc
Confidence 788999999999999999999865 899999999876554
No 339
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.11 E-value=1.7e-10 Score=130.47 Aligned_cols=140 Identities=19% Similarity=0.210 Sum_probs=101.7
Q ss_pred cccccccceeeEEEEec--CC---CEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 11 TPLATASIAQVHRATLV--DG---RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 11 ~plasaSigqV~~A~l~--~G---~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
+-||+|.||.||+|+++ ++ ..||||..+-.-. .. . ..-.+|
T Consensus 163 kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~--~~--------------------------~------~~~~e~ 208 (474)
T KOG0194|consen 163 KKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSE--LT--------------------------K------EQIKEF 208 (474)
T ss_pred ceeecccccEEEEEEEEecCCceeeeeEEEeeccccc--cc--------------------------H------HHHHHH
Confidence 67999999999999986 33 2389996542000 00 0 011247
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHH
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEI 161 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~ 161 (864)
.+||+-++.+.| ..|-++|. ....+||||+|.|++|.+.+.-....++..+..+.+
T Consensus 209 m~EArvMr~l~H--------------------~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~ 268 (474)
T KOG0194|consen 209 MKEARVMRQLNH--------------------PNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFC 268 (474)
T ss_pred HHHHHHHHhCCC--------------------CCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHH
Confidence 789998887643 23445553 567899999999999999865443336666666666
Q ss_pred HHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 162 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 162 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.++. +++||..+++|||+-..|+|+..+ +.+++.||||+..-+
T Consensus 269 ~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~--~~vKISDFGLs~~~~ 313 (474)
T KOG0194|consen 269 YDAARGLEYLHSKNCIHRDIAARNCLYSKK--GVVKISDFGLSRAGS 313 (474)
T ss_pred HHHHhHHHHHHHCCCcchhHhHHHheecCC--CeEEeCccccccCCc
Confidence 6655 888999999999999999999864 567999999977654
No 340
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.11 E-value=3.5e-10 Score=119.63 Aligned_cols=142 Identities=17% Similarity=0.207 Sum_probs=96.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|+.|++|.||+|... +|+.||||+........ +... .+..|.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-----------------------------~~~~------~~~~e~ 50 (258)
T cd08215 6 KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSE-----------------------------KERE------DALNEV 50 (258)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEeecccCCh-----------------------------HHHH------HHHHHH
Confidence 67999999999999976 79999999865322110 0000 122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhh---cCCCHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA---FGVNKQKVVEEITRA 164 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~---~~~~~~~l~~~~~~~ 164 (864)
+.+.++++ +. +.+...+. ....+|+|||++|.+|.+...... ..++...+...+.++
T Consensus 51 ~~l~~l~~------------------~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i 112 (258)
T cd08215 51 KILKKLNH------------------PNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQL 112 (258)
T ss_pred HHHHhcCC------------------CChhheEEEEecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHH
Confidence 44444321 11 11122222 466789999999999988754332 445666666666555
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+ +..+|..|++|+|++|.||+++.+ +.++|+|||++.....
T Consensus 113 ~~~l~~lh~~~~~H~dl~~~nil~~~~--~~~~l~d~~~~~~~~~ 155 (258)
T cd08215 113 CLALKYLHSRKILHRDIKPQNIFLTSN--GLVKLGDFGISKVLSS 155 (258)
T ss_pred HHHHHHHHhCCEecccCChHHeEEcCC--CcEEECCccceeeccc
Confidence 4 788999999999999999999865 8999999999877654
No 341
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.11 E-value=8.1e-11 Score=131.01 Aligned_cols=139 Identities=20% Similarity=0.219 Sum_probs=103.7
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||+|-||.||.+....+..||||..||+..+..+. ||..|++
T Consensus 544 ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~------------------------------------~F~kEIk 587 (807)
T KOG1094|consen 544 EKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARN------------------------------------DFLKEIK 587 (807)
T ss_pred hhhcCcccceeEEEEecCceEEEEeecCcccchhHHH------------------------------------HHHHHHH
Confidence 6799999999999998777999999999987654322 3677888
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcC-CCHHHHHHHHHHHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFG-VNKQKVVEEITRAY 165 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~-~~~~~l~~~~~~~~ 165 (864)
.+.++++ | .|-+++. ....+++|||++.+.|.++....... .+.....+.+.+++
T Consensus 588 iLsqLkh------------------P--NIveLvGVC~~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqia 647 (807)
T KOG1094|consen 588 ILSRLKH------------------P--NIVELLGVCVQDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIA 647 (807)
T ss_pred HHhccCC------------------C--CeeEEEeeeecCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHH
Confidence 8887633 2 2233332 34578999999999999886433222 23444555555544
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
++.+-..+|+|||+-+.|+||+.+ +.+++.||||++.+-.
T Consensus 648 sgmaYLes~nfVHrd~a~rNcLv~~e--~~iKiadfgmsR~lys 689 (807)
T KOG1094|consen 648 SGMAYLESLNFVHRDLATRNCLVDGE--FTIKIADFGMSRNLYS 689 (807)
T ss_pred HHHHHHHhhchhhccccccceeecCc--ccEEecCccccccccc
Confidence 667778999999999999999965 9999999999986643
No 342
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.11 E-value=3.4e-10 Score=121.28 Aligned_cols=144 Identities=15% Similarity=0.112 Sum_probs=94.1
Q ss_pred ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 10 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
.+.|++|++|.||+|... +|+.|++|+.+......... +. -..+.+|
T Consensus 7 ~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~--------------------------~~------~~~~~~e 54 (266)
T cd06651 7 GKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETS--------------------------KE------VSALECE 54 (266)
T ss_pred cceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhH--------------------------HH------HHHHHHH
Confidence 378999999999999975 79999999865432111000 00 0014456
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe---cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 164 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~ 164 (864)
+..+.++++ +. +.+...+. ....+++|||++|.+|.+..... ...+.......+.++
T Consensus 55 ~~~l~~l~h------------------~~i~~~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi 115 (266)
T cd06651 55 IQLLKNLQH------------------ERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAY-GALTESVTRKYTRQI 115 (266)
T ss_pred HHHHHHcCC------------------CCeeeEEEEEEcCCCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHH
Confidence 655555532 12 12222222 13457899999999998775422 224444444433333
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+ +..+|..|++|+|++|.||+++.+ ++++|+|||++..+.
T Consensus 116 ~~~l~~LH~~~i~H~~l~p~nil~~~~--~~~~l~dfg~~~~~~ 157 (266)
T cd06651 116 LEGMSYLHSNMIVHRDIKGANILRDSA--GNVKLGDFGASKRLQ 157 (266)
T ss_pred HHHHHHHHhCCeeeCCCCHHHEEECCC--CCEEEccCCCccccc
Confidence 3 678899999999999999999854 889999999987653
No 343
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.11 E-value=2.6e-10 Score=120.46 Aligned_cols=79 Identities=28% Similarity=0.291 Sum_probs=60.7
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
....+++|||++|.+|.+..... ...+...+...+.+++ +..+|..|++|+|++|.||+++.+ ++++|+|||++.
T Consensus 65 ~~~~~~v~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~--~~~~l~d~~~~~ 141 (250)
T cd05123 65 EEKLYLVLEYAPGGELFSHLSKE-GRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDAD--GHIKLTDFGLAK 141 (250)
T ss_pred CCeeEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCC--CcEEEeecCcce
Confidence 34568999999999998775422 2355555555554444 778899999999999999999865 899999999987
Q ss_pred ccCh
Q 002927 204 KLSS 207 (864)
Q Consensus 204 ~l~~ 207 (864)
....
T Consensus 142 ~~~~ 145 (250)
T cd05123 142 ELSS 145 (250)
T ss_pred eccc
Confidence 6644
No 344
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.11 E-value=3.9e-10 Score=122.50 Aligned_cols=138 Identities=17% Similarity=0.149 Sum_probs=91.7
Q ss_pred cccccccceeeEEEEec------CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 11 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 11 ~plasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
+.||.|++|.||+|+.. .+..|++|+.+......- .-+
T Consensus 6 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~------------------------------------~~~ 49 (290)
T cd05045 6 KTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSE------------------------------------LRD 49 (290)
T ss_pred ccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHH------------------------------------HHH
Confidence 56999999999999863 236799998765432110 011
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhh-----------
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA----------- 149 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~----------- 149 (864)
+.+|...+.++.+ + .+.+++. ....+++|||++|.+|.++.....
T Consensus 50 ~~~E~~~l~~l~h------------------~--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 109 (290)
T cd05045 50 LLSEFNLLKQVNH------------------P--HVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDG 109 (290)
T ss_pred HHHHHHHHhhCCC------------------C--CEeeEEEEEecCCCcEEEEEecCCCCHHHHHHhcCCcccccccccc
Confidence 3445444444322 2 2223332 566899999999999987743211
Q ss_pred ------------cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 150 ------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 150 ------------~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..++...+...+.+++ +..+|..|++|+|+||.||+++++ +.++|+|||++..+.
T Consensus 110 ~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill~~~--~~~kl~dfg~~~~~~ 178 (290)
T cd05045 110 NRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEG--RKMKISDFGLSRDVY 178 (290)
T ss_pred ccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEEcCC--CcEEecccccccccc
Confidence 1123344444444443 788999999999999999999865 899999999987653
No 345
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.11 E-value=3.7e-10 Score=121.41 Aligned_cols=79 Identities=22% Similarity=0.278 Sum_probs=62.7
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCC-ceEEEecccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPH-RPILLDFGLT 202 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g-~i~LiDFG~~ 202 (864)
....++||||++|.+|.++.... ..++...+...+.+++ +..+|+.|++|+|++|.||+++.+ + +++|+|||++
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~--~~~~~l~dfg~~ 157 (267)
T PHA03390 81 LKGHVLIMDYIKDGDLFDLLKKE-GKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRA--KDRIYLCDYGLC 157 (267)
T ss_pred CCeeEEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCC--CCeEEEecCccc
Confidence 45689999999999998875432 2456666666555554 788999999999999999999865 5 8999999998
Q ss_pred cccCh
Q 002927 203 KKLSS 207 (864)
Q Consensus 203 ~~l~~ 207 (864)
..+..
T Consensus 158 ~~~~~ 162 (267)
T PHA03390 158 KIIGT 162 (267)
T ss_pred eecCC
Confidence 76653
No 346
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.11 E-value=1.5e-10 Score=125.22 Aligned_cols=141 Identities=17% Similarity=0.182 Sum_probs=91.3
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
++|++|++|+||+|+.+ +|+.||||+.+...... + .+-.+.+|+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-----------------------------~------~~~~~~~E~ 50 (284)
T cd07860 6 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-----------------------------G------VPSTAIREI 50 (284)
T ss_pred eeecCCCceEEEEEEECCCCCEEEEEEcccccccc-----------------------------c------cchHHHHHH
Confidence 67999999999999976 79999999765321100 0 001234455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHh-hcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~l~~~~~~~~-- 165 (864)
+.+.++++.. -+.+...+. ....++||||+.+ +|.++.... ...++...+...+.+++
T Consensus 51 ~~l~~l~h~~-----------------i~~~~~~~~~~~~~~~v~e~~~~-~l~~~~~~~~~~~l~~~~~~~~~~~i~~~ 112 (284)
T cd07860 51 SLLKELNHPN-----------------IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASPLSGIPLPLIKSYLFQLLQG 112 (284)
T ss_pred HHHHhcCCCC-----------------CcchhhhcccCCcEEEEeecccc-CHHHHHHhCCCCCCCHHHHHHHHHHHHHH
Confidence 5555543210 111111112 4567899999975 555543221 12345555555554444
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|+|++|+||+++.+ +.++|+|||++..+.
T Consensus 113 l~~lh~~~i~H~~l~p~nill~~~--~~~~l~dfg~~~~~~ 151 (284)
T cd07860 113 LAFCHSHRVLHRDLKPQNLLINTE--GAIKLADFGLARAFG 151 (284)
T ss_pred HHHHHHCCeecCCCCHHHEEECCC--CCEEEeeccchhhcc
Confidence 788999999999999999999865 899999999876553
No 347
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.10 E-value=3.2e-10 Score=120.29 Aligned_cols=143 Identities=17% Similarity=0.185 Sum_probs=95.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCCh-HHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGI-KTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i-~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
+.||.|++|.||+|... +++.||||+..... .... . -.+.+|
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~------------------------------~------~~~~~e 49 (256)
T cd08220 6 RVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDE------------------------------R------LAAQNE 49 (256)
T ss_pred EEecccCceEEEEEEEcCCCcEEEEEEEeccccccHH------------------------------H------HHHHHH
Confidence 67999999999999975 78999999865321 1000 0 013345
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHHH-
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY- 165 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~~- 165 (864)
++.++++++. .-+.+..... ....++||||++|.+|.++..... ...+...+...+.+++
T Consensus 50 ~~~l~~~~~~-----------------~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~ 112 (256)
T cd08220 50 CQVLKLLSHP-----------------NIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILL 112 (256)
T ss_pred HHHHhhCCCC-----------------chhheeeeEecCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHH
Confidence 5555544221 0111112222 455789999999999988764322 2245555555444443
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|++|+||+++.+ ++.++|+|||++..+..
T Consensus 113 ~l~~lh~~~i~h~dl~~~nil~~~~-~~~~~l~d~~~~~~~~~ 154 (256)
T cd08220 113 ALHHVHTKLILHRDLKTQNILLDKH-KMVVKIGDFGISKILSS 154 (256)
T ss_pred HHHHHHhCCeecCCCCHHHEEEcCC-CCEEEEccCCCceecCC
Confidence 678899999999999999999854 35689999999987754
No 348
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.10 E-value=2.3e-10 Score=125.23 Aligned_cols=142 Identities=17% Similarity=0.174 Sum_probs=91.7
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|+.|++|+||+|+.. +|+.||||+........ + ....+.+|.
T Consensus 18 ~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~---~--------------------------------~~~~~~~e~ 62 (310)
T cd07865 18 AKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKE---G--------------------------------FPITALREI 62 (310)
T ss_pred EEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcC---C--------------------------------chhHHHHHH
Confidence 67999999999999976 79999999764221100 0 001123355
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---------cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEE 160 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~ 160 (864)
+.+.++.+. .-+.+..+.. ....++||||+.+ ++.+........+....+...
T Consensus 63 ~~l~~l~h~-----------------~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i 124 (310)
T cd07865 63 KILQLLKHE-----------------NVVNLIEICRTKATPYNRYKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKV 124 (310)
T ss_pred HHHHhCCCC-----------------CccceEEEEecccccccCCCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHH
Confidence 555554321 0122222221 2345899999976 444443222224555665555
Q ss_pred HHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 161 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 161 ~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 125 ~~qi~~al~~lH~~~i~H~dl~p~nil~~~~--~~~kl~dfg~~~~~~~ 171 (310)
T cd07865 125 MKMLLNGLYYIHRNKILHRDMKAANILITKD--GILKLADFGLARAFSL 171 (310)
T ss_pred HHHHHHHHHHHHHCCeeccCCCHHHEEECCC--CcEEECcCCCcccccC
Confidence 55544 788999999999999999999865 8999999999886644
No 349
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.10 E-value=3.4e-10 Score=123.18 Aligned_cols=138 Identities=14% Similarity=0.156 Sum_probs=87.9
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|+.|++|.||+|+.+ +|+.||||+.+...... + ..-.+.+|+
T Consensus 8 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~-----------------------------~------~~~~~~~e~ 52 (294)
T PLN00009 8 EKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDE-----------------------------G------VPSTAIREI 52 (294)
T ss_pred EEecCCCCEEEEEEEecCCCcEEEEEehhhccccc-----------------------------c------chHHHHHHH
Confidence 67999999999999976 79999999754211000 0 001133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRA 164 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~ 164 (864)
+.+.++.+ + .+++++. ....++||||+++ ++.+...... ...+...+...+.++
T Consensus 53 ~~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi 111 (294)
T PLN00009 53 SLLKEMQH------------------G--NIVRLQDVVHSEKRLYLVFEYLDL-DLKKHMDSSPDFAKNPRLIKTYLYQI 111 (294)
T ss_pred HHHHhccC------------------C--CEeeEEEEEecCCeEEEEEecccc-cHHHHHHhCCCCCcCHHHHHHHHHHH
Confidence 55555432 1 2333332 4668899999975 5544432111 112333333333332
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+ +..+|..|++|+|++|.||+++.+ ++.++|+|||++..+
T Consensus 112 ~~aL~~LH~~~i~H~dl~p~nill~~~-~~~~kl~dfg~~~~~ 153 (294)
T PLN00009 112 LRGIAYCHSHRVLHRDLKPQNLLIDRR-TNALKLADFGLARAF 153 (294)
T ss_pred HHHHHHHHhCCeeCCCCCcceEEEECC-CCEEEEccccccccc
Confidence 2 788999999999999999999854 367999999998754
No 350
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.10 E-value=4.9e-10 Score=124.57 Aligned_cols=79 Identities=15% Similarity=0.197 Sum_probs=58.4
Q ss_pred cCCceEEEeecCCcCCCChHHHhh---------------cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEcc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEA---------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSK 188 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~---------------~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~ 188 (864)
....+++|||++|.+|.++..... .......+...+.+++ +..+|..|++|+|++|.||+++.
T Consensus 90 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~ 169 (334)
T cd05100 90 DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTE 169 (334)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcC
Confidence 455789999999999988754221 1123333334333333 67889999999999999999986
Q ss_pred CCCCceEEEecccccccC
Q 002927 189 DPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 189 ~~~g~i~LiDFG~~~~l~ 206 (864)
+ +.++|+|||+++.+.
T Consensus 170 ~--~~~kL~Dfg~~~~~~ 185 (334)
T cd05100 170 D--NVMKIADFGLARDVH 185 (334)
T ss_pred C--CcEEECCcccceecc
Confidence 5 899999999987654
No 351
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.10 E-value=2.5e-10 Score=120.40 Aligned_cols=78 Identities=17% Similarity=0.189 Sum_probs=60.0
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
....+|+|||++|.+|.+.... ........+...+.+++ +..+|+.|++|+|+||.||+++.+ +.++++|||...
T Consensus 57 ~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~--~~~~l~df~~~~ 133 (237)
T cd05576 57 EDSVFLVLQHAEGGKLWSHISK-FLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDR--GHIQLTYFSRWS 133 (237)
T ss_pred CCeEEEEEecCCCCCHHHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCC--CCEEEecccchh
Confidence 3456899999999999876532 23455555555554444 788899999999999999999865 889999999876
Q ss_pred ccC
Q 002927 204 KLS 206 (864)
Q Consensus 204 ~l~ 206 (864)
.+.
T Consensus 134 ~~~ 136 (237)
T cd05576 134 EVE 136 (237)
T ss_pred ccc
Confidence 543
No 352
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.10 E-value=5e-10 Score=120.44 Aligned_cols=137 Identities=19% Similarity=0.179 Sum_probs=93.3
Q ss_pred cccccccceeeEEEEec------CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 11 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 11 ~plasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
+-||.|++|.||+|+.+ +.+.|++|+....-.+.. . -+
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~--------------------------~----------~~ 54 (275)
T cd05046 11 TTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENL--------------------------Q----------SE 54 (275)
T ss_pred eeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHH--------------------------H----------HH
Confidence 55999999999999964 346799997543211100 0 01
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhc--------CC
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAF--------GV 152 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~--------~~ 152 (864)
+.+|++.++++.+ ..+.+++. ....++||||++|.+|.++...... .+
T Consensus 55 ~~~E~~~l~~l~h--------------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l 114 (275)
T cd05046 55 FRRELDMFRKLSH--------------------KNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPL 114 (275)
T ss_pred HHHHHHHHHhcCC--------------------cceeeeEEEECCCCcceEEEEecCCCcHHHHHHhcccccccccccCC
Confidence 4456666666532 12233332 3567899999999999887643221 24
Q ss_pred CHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 153 NKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 153 ~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
....+...+.+++ +..+|..|++|+|++|.||+++.+ +.+++.|||++...
T Consensus 115 ~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~--~~~~l~~~~~~~~~ 167 (275)
T cd05046 115 STKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQ--REVKVSLLSLSKDV 167 (275)
T ss_pred CHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCC--CcEEEccccccccc
Confidence 4455554444443 788999999999999999999865 88999999987644
No 353
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.09 E-value=4.4e-10 Score=123.43 Aligned_cols=143 Identities=17% Similarity=0.146 Sum_probs=93.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|+.|++|+||+|+.. +|+.||||..+..-... .. ..-++..|.
T Consensus 21 ~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~------------------------~~----------~~~~~~~e~ 66 (308)
T cd06634 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQS------------------------NE----------KWQDIIKEV 66 (308)
T ss_pred HheeeCCCEEEEEEEEcCCCcEEEEEEEecccccC------------------------hH----------HHHHHHHHH
Confidence 67999999999999976 78999999765321100 00 001133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
+.+..+.+. ..+.+...+. ....+|||||+.| ++.+.........+...+...+.+++ +
T Consensus 67 ~~l~~l~h~-----------------~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~~l~~~l 128 (308)
T cd06634 67 RFLQKLRHP-----------------NTIQYRGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAVTHGALQGL 128 (308)
T ss_pred HHHHhCCCC-----------------CcccEEEEEEcCCeeEEEEEccCC-CHHHHHHHcCCCCCHHHHHHHHHHHHHHH
Confidence 555554321 0122222222 5667899999986 56555433333455555555554443 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 129 ~~LH~~~i~H~dl~p~nil~~~~--~~~kl~dfg~~~~~~~ 167 (308)
T cd06634 129 AYLHSHNMIHRDVKAGNILLSEP--GLVKLGDFGSASIMAP 167 (308)
T ss_pred HHHHhCCcccCCCCHHhEEECCC--CcEEECCcccceeecC
Confidence 88899999999999999999865 8999999999876543
No 354
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.09 E-value=2.1e-10 Score=122.32 Aligned_cols=81 Identities=16% Similarity=0.149 Sum_probs=59.1
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCC------CceEEE
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPP------HRPILL 197 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~------g~i~Li 197 (864)
....++||||++|.+|.++........+...+...+.+++ +..+|+.|++|+|+||.||+++.++. +.++++
T Consensus 71 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~ 150 (258)
T cd05078 71 GDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLS 150 (258)
T ss_pred CCCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEec
Confidence 4678899999999999887543333345554444444433 77889999999999999999986521 137899
Q ss_pred ecccccccC
Q 002927 198 DFGLTKKLS 206 (864)
Q Consensus 198 DFG~~~~l~ 206 (864)
|||.+....
T Consensus 151 d~g~~~~~~ 159 (258)
T cd05078 151 DPGISITVL 159 (258)
T ss_pred ccccccccC
Confidence 999876543
No 355
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.08 E-value=4.8e-10 Score=136.98 Aligned_cols=143 Identities=14% Similarity=0.072 Sum_probs=93.1
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCCh-HHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGI-KTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i-~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
+.||.|+||.||+|+.+ +++.||+|+..... .... . -.|..|
T Consensus 19 ~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~------------------------------~------~~~~~E 62 (1021)
T PTZ00266 19 KKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKERE------------------------------K------SQLVIE 62 (1021)
T ss_pred EEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHH------------------------------H------HHHHHH
Confidence 67999999999999976 78899999875321 1100 0 013345
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---cCCceEEEeecCCcCCCChHHHh---hcCCCHHHHHHHHH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEIT 162 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~~---~~~~~~~~l~~~~~ 162 (864)
+..+.++.+. ..+.+...+. ....+|||||++|.+|.+++... ...++...+...+.
T Consensus 63 I~IL~~L~HP-----------------NIVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~ 125 (1021)
T PTZ00266 63 VNVMRELKHK-----------------NIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITR 125 (1021)
T ss_pred HHHHHHcCCC-----------------CcCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHH
Confidence 5555554321 1122223322 23467999999999998875421 12355566555555
Q ss_pred HHH--HHHHHhc-------CeeccCCCCCCeEEccC---------------CCCceEEEecccccccC
Q 002927 163 RAY--AHQIYVD-------GFFNGDPHPGNFLVSKD---------------PPHRPILLDFGLTKKLS 206 (864)
Q Consensus 163 ~~~--l~~i~~~-------G~~H~D~hPgNIlv~~~---------------~~g~i~LiDFG~~~~l~ 206 (864)
+++ |..+|.. +|+|+||||.|||+..+ ..+.++|+|||++..+.
T Consensus 126 QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~ 193 (1021)
T PTZ00266 126 QLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIG 193 (1021)
T ss_pred HHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCcccccc
Confidence 544 7778874 49999999999999642 12458999999887653
No 356
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.08 E-value=1.7e-10 Score=117.92 Aligned_cols=80 Identities=20% Similarity=0.333 Sum_probs=51.8
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHHHHHH----HhcCeeccCCCCCCeEEccCCCCceEEEeccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQI----YVDGFFNGDPHPGNFLVSKDPPHRPILLDFGL 201 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~l~~i----~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~ 201 (864)
.+.-.+.||.+. .-++.++..-. +.-+++++-.+.-+.++.+ -.||++|||+||+|||+++. |.|+|+|||+
T Consensus 163 n~dV~IcMelMs-~C~ekLlkrik-~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~--GniKlCDFGI 238 (391)
T KOG0983|consen 163 NTDVFICMELMS-TCAEKLLKRIK-GPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDER--GNIKLCDFGI 238 (391)
T ss_pred CchHHHHHHHHH-HHHHHHHHHhc-CCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccC--CCEEeecccc
Confidence 445557788663 22333332222 2234444444433333333 26899999999999999976 9999999999
Q ss_pred ccccChHH
Q 002927 202 TKKLSSSM 209 (864)
Q Consensus 202 ~~~l~~~~ 209 (864)
++++.+..
T Consensus 239 sGrlvdSk 246 (391)
T KOG0983|consen 239 SGRLVDSK 246 (391)
T ss_pred cceeeccc
Confidence 99987653
No 357
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.08 E-value=4.1e-10 Score=121.38 Aligned_cols=139 Identities=19% Similarity=0.288 Sum_probs=90.6
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|+.|++|+||+|+.+ +++.||||+.+...... .+.+...|.
T Consensus 5 ~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~------------------------------------~~~~~~~e~ 48 (282)
T cd07831 5 GKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSL------------------------------------EQVNNLREI 48 (282)
T ss_pred eeccccccceEEEEEEcCCCcEEEEEEehhccCCc------------------------------------hhhhHHHHH
Confidence 56999999999999976 79999999765322110 000112243
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-c--CCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-S--SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~--~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..+.++.. ++. +.+...+. . ...+++|||++| ++.+.........+...+...+.+++
T Consensus 49 ~~l~~l~~-----------------h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~ 110 (282)
T cd07831 49 QALRRLSP-----------------HPNILRLIEVLFDRKTGRLALVFELMDM-NLYELIKGRKRPLPEKRVKSYMYQLL 110 (282)
T ss_pred HHHhhcCC-----------------CCCccceEEEEecCCCCcEEEEEecCCc-cHHHHHHhccCCCCHHHHHHHHHHHH
Confidence 33333321 111 22223332 3 567899999987 44444322223355566665555544
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|+|++|.||+++. +.++|+|||++..+.
T Consensus 111 ~~L~~LH~~~i~H~dl~p~ni~l~~---~~~kl~dfg~~~~~~ 150 (282)
T cd07831 111 KSLDHMHRNGIFHRDIKPENILIKD---DILKLADFGSCRGIY 150 (282)
T ss_pred HHHHHHHHCCceecccCHHHEEEcC---CCeEEEecccccccc
Confidence 78899999999999999999984 799999999987653
No 358
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.08 E-value=6.6e-10 Score=120.67 Aligned_cols=79 Identities=15% Similarity=0.237 Sum_probs=60.6
Q ss_pred cCCceEEEeecCCcCCCChHHHhh------------cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCC
Q 002927 126 SSETVLILEFMDGIRLNDCESLEA------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPP 191 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~------------~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~ 191 (864)
....+++|||++|.+|.++..... ..++...+...+.+++ +..+|..|++|||++|.||+++++
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~-- 156 (288)
T cd05093 79 GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGEN-- 156 (288)
T ss_pred CCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccC--
Confidence 567899999999999987753211 1245555555554444 778999999999999999999865
Q ss_pred CceEEEecccccccC
Q 002927 192 HRPILLDFGLTKKLS 206 (864)
Q Consensus 192 g~i~LiDFG~~~~l~ 206 (864)
+.++|+|||++..+.
T Consensus 157 ~~~kl~dfg~~~~~~ 171 (288)
T cd05093 157 LLVKIGDFGMSRDVY 171 (288)
T ss_pred CcEEeccCCcccccc
Confidence 899999999987654
No 359
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.08 E-value=4.8e-10 Score=125.19 Aligned_cols=145 Identities=18% Similarity=0.262 Sum_probs=90.1
Q ss_pred cccccc-ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHh
Q 002927 4 MFMDFV-ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPK 81 (864)
Q Consensus 4 ~F~~fd-~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~ 81 (864)
+...|. .++||+|++|.||+|+.. +|+.||||+.+....... +.
T Consensus 13 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~-----------------------------~~----- 58 (342)
T cd07879 13 LPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEI-----------------------------FA----- 58 (342)
T ss_pred cccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCcccccc-----------------------------ch-----
Confidence 344454 489999999999999975 799999998653221000 00
Q ss_pred hccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-------cCCceEEEeecCCcCCCChHHHhhcCCCH
Q 002927 82 ELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-------SSETVLILEFMDGIRLNDCESLEAFGVNK 154 (864)
Q Consensus 82 Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~ 154 (864)
.++.+|.+.+.++.+.. -+.+..++. ....++||||+.+ .+.+ .....+..
T Consensus 59 -~~~~~e~~~l~~l~h~n-----------------iv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~---~~~~~~~~ 116 (342)
T cd07879 59 -KRAYRELTLLKHMQHEN-----------------VIGLLDVFTSAVSGDEFQDFYLVMPYMQT-DLQK---IMGHPLSE 116 (342)
T ss_pred -hHHHHHHHHHHhcCCCC-----------------ccchhheecccccCCCCceEEEEeccccc-CHHH---HHcCCCCH
Confidence 01223443333332210 011111111 2345899999964 3332 22234555
Q ss_pred HHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 155 QKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 155 ~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..+...+.+++ +..+|..|++|+|+||+||+++.+ ++++|+|||++....
T Consensus 117 ~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~--~~~kL~dfg~~~~~~ 168 (342)
T cd07879 117 DKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNED--CELKILDFGLARHAD 168 (342)
T ss_pred HHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC--CCEEEeeCCCCcCCC
Confidence 55555444444 778899999999999999999865 899999999987653
No 360
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.08 E-value=5.3e-10 Score=121.60 Aligned_cols=137 Identities=18% Similarity=0.187 Sum_probs=92.3
Q ss_pred cccccccceeeEEEEec------CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 11 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 11 ~plasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
+.|+.|++|.||+|+.. ++..|++|..+...... +-.
T Consensus 11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~-------------------------------------~~~ 53 (291)
T cd05094 11 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAA-------------------------------------RKD 53 (291)
T ss_pred eeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHH-------------------------------------HHH
Confidence 67999999999999842 45678999765322110 112
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhh-----------
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEA----------- 149 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~----------- 149 (864)
+.+|+..+.++++ + .|.+++ . ....+|||||++|.+|.++.....
T Consensus 54 ~~~e~~~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~ 113 (291)
T cd05094 54 FQREAELLTNLQH------------------E--HIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQP 113 (291)
T ss_pred HHHHHHHHhcCCC------------------C--CcceEEEEEccCCceEEEEecCCCCcHHHHHHhcCccccccccccc
Confidence 4446555555432 1 123333 2 456799999999999988754221
Q ss_pred ----cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 150 ----FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 150 ----~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
...+...+...+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||++....
T Consensus 114 ~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~--~~~~l~dfg~a~~~~ 174 (291)
T cd05094 114 RQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGAN--LLVKIGDFGMSRDVY 174 (291)
T ss_pred ccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccC--CcEEECCCCcccccC
Confidence 1133344444444433 678899999999999999999865 899999999987654
No 361
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.08 E-value=2.8e-10 Score=122.89 Aligned_cols=79 Identities=25% Similarity=0.350 Sum_probs=58.6
Q ss_pred cCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLT 202 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~ 202 (864)
....++||||+ +.++.+...... ..+....+...+.+++ +..+|..|++|+|++|.||+++++ +.++|+|||++
T Consensus 70 ~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~--~~~~l~d~~~~ 146 (283)
T cd07830 70 NDELYFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGP--EVVKIADFGLA 146 (283)
T ss_pred CCcEEEEEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCC--CCEEEeecccc
Confidence 45568999999 556655543222 2345555555555544 788899999999999999999865 89999999998
Q ss_pred cccCh
Q 002927 203 KKLSS 207 (864)
Q Consensus 203 ~~l~~ 207 (864)
..+..
T Consensus 147 ~~~~~ 151 (283)
T cd07830 147 REIRS 151 (283)
T ss_pred eeccC
Confidence 76654
No 362
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.08 E-value=5.9e-10 Score=124.64 Aligned_cols=139 Identities=21% Similarity=0.258 Sum_probs=90.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
++|++|++|.||+|... +|+.||||+.......... +-.+.+|+
T Consensus 23 ~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~-----------------------------------~~~~~~Ei 67 (345)
T cd07877 23 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-----------------------------------AKRTYREL 67 (345)
T ss_pred EEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHH-----------------------------------HHHHHHHH
Confidence 68999999999999964 8999999987643221100 00133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-------cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 162 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~ 162 (864)
..+.++++.. -+.+..++. ....+++++++ |.+|.++.. ........+...+.
T Consensus 68 ~~l~~l~h~~-----------------iv~~~~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~--~~~l~~~~~~~i~~ 127 (345)
T cd07877 68 RLLKHMKHEN-----------------VIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVK--CQKLTDDHVQFLIY 127 (345)
T ss_pred HHHHHcCCCc-----------------ccceeeeeeecccccccccEEEEehhc-ccCHHHHHh--cCCCCHHHHHHHHH
Confidence 5555553311 111222221 13357888887 667766533 22345444444444
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+++ +..+|+.|++|+|+||.||+++.+ +.++|+|||++....
T Consensus 128 qi~~aL~~LH~~~ivH~dlkp~NIll~~~--~~~kl~dfg~~~~~~ 171 (345)
T cd07877 128 QILRGLKYIHSADIIHRDLKPSNLAVNED--CELKILDFGLARHTD 171 (345)
T ss_pred HHHHHHHHHHHCCeeecCCChHHEEEcCC--CCEEEeccccccccc
Confidence 433 788999999999999999999865 899999999987643
No 363
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.08 E-value=3.3e-10 Score=122.39 Aligned_cols=141 Identities=16% Similarity=0.182 Sum_probs=91.4
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|+.|++|+||+|+.+ +|+.||||+.+......- . .-++.+|.
T Consensus 5 ~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~-----------------------------~------~~~~~~E~ 49 (283)
T cd07835 5 EKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEG-----------------------------V------PSTAIREI 49 (283)
T ss_pred eEecCCCCeEEEEEEEcCCCCEEEEEEeeccccccc-----------------------------c------hhHHHHHH
Confidence 56999999999999976 899999998754321100 0 00123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~~-- 165 (864)
..+.++++. .-+.+..... ....+++|||+++ +|.++..... ...+...+...+.+++
T Consensus 50 ~~l~~l~~~-----------------~iv~~~~~~~~~~~~~iv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~i~~~ 111 (283)
T cd07835 50 SLLKELNHP-----------------NIVRLLDVVHSENKLYLVFEFLDL-DLKKYMDSSPLTGLDPPLIKSYLYQLLQG 111 (283)
T ss_pred HHHHhcCCC-----------------CccCHhheeccCCeEEEEEeccCc-CHHHHHhhCCCCCCCHHHHHHHHHHHHHH
Confidence 444443221 0111111222 4567899999964 6766543221 1355555555554444
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|+|++|+||+++.+ +.++|+|||++..+.
T Consensus 112 L~~lH~~~~~H~dl~p~nil~~~~--~~~~l~df~~~~~~~ 150 (283)
T cd07835 112 IAYCHSHRVLHRDLKPQNLLIDRE--GALKLADFGLARAFG 150 (283)
T ss_pred HHHHHHCCeeCCCCCHHHEEEcCC--CcEEEeecccccccC
Confidence 788999999999999999999864 899999999987654
No 364
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.07 E-value=6.8e-10 Score=114.83 Aligned_cols=140 Identities=19% Similarity=0.212 Sum_probs=96.9
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
++|++|++|+||+++.. +++.|+||+.+...... . .-++.+|+
T Consensus 5 ~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~---~---------------------------------~~~~~~e~ 48 (225)
T smart00221 5 KKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEK---Q---------------------------------REEFLREI 48 (225)
T ss_pred eEeecCCCeEEEEEEEcCCCcEEEEEeeccccchH---H---------------------------------HHHHHHHH
Confidence 68999999999999987 48999999877543220 0 00233455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+.++++ ..+++++ . ....+++|||++|.+|.++........+...+...+.+++
T Consensus 49 ~~~~~~~~--------------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~ 108 (225)
T smart00221 49 RILKKLKH--------------------PNIVKLYGVFEDPEPLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQIL 108 (225)
T ss_pred HHHHhCCC--------------------CChhhheeeeecCCceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHH
Confidence 55444421 1122222 1 4678899999999999887543221145444444444443
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+...
T Consensus 109 ~~l~~lh~~~i~h~di~~~ni~v~~~--~~~~l~d~g~~~~~~~~ 151 (225)
T smart00221 109 EALEYLHSLGIVHRDLKPENILLGMD--GLVKLADFGLARFIHRD 151 (225)
T ss_pred HHHHHHHhCCeecCCCCHHHEEEcCC--CCEEEeeCceeeEecCc
Confidence 678899999999999999999865 89999999998877554
No 365
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.07 E-value=3.4e-10 Score=121.20 Aligned_cols=81 Identities=19% Similarity=0.177 Sum_probs=58.9
Q ss_pred cCCceEEEeecCCcCCCChHHHhh------cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCC---CCce
Q 002927 126 SSETVLILEFMDGIRLNDCESLEA------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDP---PHRP 194 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~------~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~---~g~i 194 (864)
....+++|||++|.+|.+...... .......+...+.+++ +..+|..|++|+|++|.||+++.+. ...+
T Consensus 71 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~ 150 (269)
T cd05044 71 NEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVV 150 (269)
T ss_pred CCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcce
Confidence 456789999999999987754211 1133344444444443 6788999999999999999998651 1279
Q ss_pred EEEecccccccC
Q 002927 195 ILLDFGLTKKLS 206 (864)
Q Consensus 195 ~LiDFG~~~~l~ 206 (864)
+|+|||++..+.
T Consensus 151 ~l~dfg~~~~~~ 162 (269)
T cd05044 151 KIGDFGLARDIY 162 (269)
T ss_pred EECCcccccccc
Confidence 999999987664
No 366
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.07 E-value=1.1e-10 Score=132.15 Aligned_cols=140 Identities=18% Similarity=0.196 Sum_probs=102.0
Q ss_pred cccccccceeeEEEEec--CCC--EEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHH
Q 002927 11 TPLATASIAQVHRATLV--DGR--QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 86 (864)
Q Consensus 11 ~plasaSigqV~~A~l~--~G~--~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 86 (864)
+-||+||||.|+||.++ +|+ .||||.++++....+- -||+
T Consensus 116 e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~m------------------------------------ddfl 159 (1039)
T KOG0199|consen 116 ELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIM------------------------------------DDFL 159 (1039)
T ss_pred HHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhH------------------------------------HHHH
Confidence 45999999999999986 565 5799999987654321 1478
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---cCCceEEEeecCCcCCCChHHH-hhcCCCHHHHHHHHH
Q 002927 87 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESL-EAFGVNKQKVVEEIT 162 (864)
Q Consensus 87 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~-~~~~~~~~~l~~~~~ 162 (864)
+|+..+.+++|. ++-++|. .-...||||.+++++|-+.+.- .+..+-...+...+.
T Consensus 160 rEas~M~~L~H~--------------------hliRLyGvVl~qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~ 219 (1039)
T KOG0199|consen 160 REASHMLKLQHP--------------------HLIRLYGVVLDQPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAM 219 (1039)
T ss_pred HHHHHHHhccCc--------------------ceeEEeeeeccchhhHHhhhcccchHHHHHhhccccceeHHHHHHHHH
Confidence 899998887652 2334443 5567799999999999887543 112233344555444
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
++. +.++-..++||||+-.-||++-.. ..++|+|||+++.|...
T Consensus 220 QiA~aM~YLeskrlvHRDLAARNlllasp--rtVKI~DFGLmRaLg~n 265 (1039)
T KOG0199|consen 220 QIAKAMQYLESKRLVHRDLAARNLLLASP--RTVKICDFGLMRALGEN 265 (1039)
T ss_pred HHHHHHHHHhhhhhhhhhhhhhhheeccc--ceeeeecccceeccCCC
Confidence 443 555567999999999999999864 68999999999988754
No 367
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.07 E-value=5.8e-10 Score=121.58 Aligned_cols=137 Identities=16% Similarity=0.205 Sum_probs=91.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|.||++... +|+.||+|+........ .+ .+.+|.
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~-------------------------------~~------~~~~e~ 67 (293)
T cd06647 25 EKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPK-------------------------------KE------LIINEI 67 (293)
T ss_pred eEecCCCCeEEEEEEEcCCCCEEEEEEeccccchH-------------------------------HH------HHHHHH
Confidence 67999999999999965 78999999753211000 00 122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..+.++.+ +. +.+++ . ....++||||++|.+|.++.. ........+...+.+++
T Consensus 68 ~~l~~l~h------------------p~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~l~~~~~~~i~~~l~ 125 (293)
T cd06647 68 LVMRENKH------------------PN--IVNYLDSYLVGDELWVVMEYLAGGSLTDVVT--ETCMDEGQIAAVCRECL 125 (293)
T ss_pred HHHhhcCC------------------CC--eeehhheeeeCCcEEEEEecCCCCcHHHHHh--hcCCCHHHHHHHHHHHH
Confidence 33333321 11 22222 2 456789999999999987743 33344444444444433
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+.+.
T Consensus 126 ~al~~LH~~gi~H~dL~p~Nili~~~--~~~kL~dfg~~~~~~~~ 168 (293)
T cd06647 126 QALEFLHSNQVIHRDIKSDNILLGMD--GSVKLTDFGFCAQITPE 168 (293)
T ss_pred HHHHHHHhCCEeeccCCHHHEEEcCC--CCEEEccCcceeccccc
Confidence 778899999999999999999865 88999999988766543
No 368
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.07 E-value=4.3e-10 Score=124.98 Aligned_cols=141 Identities=18% Similarity=0.278 Sum_probs=93.2
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+-||+|+-+.||++...+.+.+|+|-.. ....|-+ .++ -|.+|..
T Consensus 367 k~iG~GGSSkV~kV~~s~~~iyalkkv~-----~~~~D~q--------------------tl~----------gy~nEI~ 411 (677)
T KOG0596|consen 367 KQIGSGGSSKVFKVLNSDKQIYALKKVV-----LLEADNQ--------------------TLD----------GYRNEIA 411 (677)
T ss_pred HhhcCCCcceeeeeecCCCcchhhhHHH-----HhhcCHH--------------------HHH----------HHHHHHH
Confidence 5699999999999997777778877211 0111111 011 1677888
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHH----HHHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVV----EEIT 162 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~----~~~~ 162 (864)
-+.+|... ..|-.+|. .+..+|||||=+ .+|..++.- ..+.++.-.. +.++
T Consensus 412 lL~KLkg~-------------------~~IIqL~DYEv~d~~lYmvmE~Gd-~DL~kiL~k-~~~~~~~~~lk~ywkqML 470 (677)
T KOG0596|consen 412 LLNKLKGH-------------------DKIIQLYDYEVTDGYLYMVMECGD-IDLNKILKK-KKSIDPDWFLKFYWKQML 470 (677)
T ss_pred HHHHhcCC-------------------ceEEEEeeeeccCceEEEEeeccc-ccHHHHHHh-ccCCCchHHHHHHHHHHH
Confidence 88887542 45556664 566789999754 556555432 2222322222 2222
Q ss_pred HHHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHHH
Q 002927 163 RAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQ 211 (864)
Q Consensus 163 ~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~ 211 (864)
.+++.||.+||||+||||.|+++-+ |+++|||||++..+..+...
T Consensus 471 -~aV~~IH~~gIVHSDLKPANFLlVk---G~LKLIDFGIA~aI~~DTTs 515 (677)
T KOG0596|consen 471 -LAVKTIHQHGIVHSDLKPANFLLVK---GRLKLIDFGIANAIQPDTTS 515 (677)
T ss_pred -HHHHHHHHhceeecCCCcccEEEEe---eeEEeeeechhcccCccccc
Confidence 2367789999999999999999863 89999999999988776543
No 369
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.06 E-value=8.8e-11 Score=119.72 Aligned_cols=139 Identities=17% Similarity=0.174 Sum_probs=85.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH-
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE- 88 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E- 88 (864)
.-||.|+||.|++-+.+ +|+..|||-.|-...+. + ..++..|+|-..-
T Consensus 70 g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~k---e---------------------------q~rll~e~d~~mks 119 (361)
T KOG1006|consen 70 GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEK---E---------------------------QKRLLMEHDTVMKS 119 (361)
T ss_pred HHhcCCcchhhhhhhcCccCcEEEEEEeeeccchH---H---------------------------HHHHHHHHHHHHhh
Confidence 56999999999999976 89999999766433211 1 1122233332222
Q ss_pred --HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHH----hhcCCCHHHHHHHH-
Q 002927 89 --AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESL----EAFGVNKQKVVEEI- 161 (864)
Q Consensus 89 --a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~----~~~~~~~~~l~~~~- 161 (864)
.-|+.+|..... ..+..+++||.++ .+++.+-+. .+..+..+-+....
T Consensus 120 ~~cp~IVkfyGa~F------------------------~EGdcWiCMELMd-~SlDklYk~vy~vq~~~ipE~Ilg~Itv 174 (361)
T KOG1006|consen 120 SNCPNIVKFYGALF------------------------SEGDCWICMELMD-ISLDKLYKRVYSVQKSRIPENILGHITV 174 (361)
T ss_pred cCCcHHHHHhhhhh------------------------cCCceeeeHHHHh-hhHHHHHHHHHHHHhccCcHhhhhheee
Confidence 224555544321 1566789999986 455443221 12222222222221
Q ss_pred --HHHHHHHH-HhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 162 --TRAYAHQI-YVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 162 --~~~~l~~i-~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+++ |..+ -+..++|||+||+|||+++. |.++|+|||+++.+-+
T Consensus 175 atV~A-L~yLK~~lkiIHRDvKPSNILldr~--G~vKLCDFGIcGqLv~ 220 (361)
T KOG1006|consen 175 ATVDA-LDYLKEELKIIHRDVKPSNILLDRH--GDVKLCDFGICGQLVD 220 (361)
T ss_pred eehhH-HHHHHHHhhhhhccCChhheEEecC--CCEeeecccchHhHHH
Confidence 222 3333 25789999999999999976 8999999999998754
No 370
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.06 E-value=5.9e-10 Score=120.83 Aligned_cols=138 Identities=14% Similarity=0.151 Sum_probs=88.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+++.. +|+.||||..+...... .+.++.+|.
T Consensus 10 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~------------------------------------~~~~~~~e~ 53 (288)
T cd06616 10 GEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEK------------------------------------EQKRLLMDL 53 (288)
T ss_pred HHhCCCCceEEEEEEECCCCCEEEEEEehhccChH------------------------------------HHHHHHHHH
Confidence 67999999999999976 79999999765322110 011234455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHH----hhcCCCHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESL----EAFGVNKQKVVEEI 161 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~----~~~~~~~~~l~~~~ 161 (864)
..+.++.. ++ .|++++. ....+++|||+++ ++.++... ....+....+...+
T Consensus 54 ~~l~~~~~-----------------~~--~iv~~~~~~~~~~~~~~~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~ 113 (288)
T cd06616 54 DVVMRSSD-----------------CP--YIVKFYGALFREGDCWICMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIA 113 (288)
T ss_pred HHHHHhcC-----------------CC--CEeeeeeEEecCCcEEEEEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHH
Confidence 44444321 11 2333332 5567899999874 44443211 11234444444444
Q ss_pred HHHH--HHHHHh-cCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 162 TRAY--AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 162 ~~~~--l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.+++ ++.+|. .|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 114 ~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~--~~~kl~dfg~~~~~~ 159 (288)
T cd06616 114 VATVKALNYLKEELKIIHRDVKPSNILLDRN--GNIKLCDFGISGQLV 159 (288)
T ss_pred HHHHHHHHHHhhcCCeeccCCCHHHEEEccC--CcEEEeecchhHHhc
Confidence 4433 677876 599999999999999865 889999999886543
No 371
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.06 E-value=1.7e-09 Score=105.65 Aligned_cols=145 Identities=21% Similarity=0.279 Sum_probs=97.9
Q ss_pred cccccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 9 VETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 9 d~~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
+..++-.|.-|.|+++.. .|+..+||-..|.--..-.-|.++-+. ...+|
T Consensus 11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~-----------------------------Rt~~E 60 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRK-----------------------------RTKQE 60 (229)
T ss_pred cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHH-----------------------------HHHHH
Confidence 357889999999999986 799999996543322222222221111 13468
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--cCCceEEEeecCC-cCCCChHHHhh-cC-CCHH--HHHHHH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDG-IRLNDCESLEA-FG-VNKQ--KVVEEI 161 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLvmE~i~G-~~L~~~~~~~~-~~-~~~~--~l~~~~ 161 (864)
|+-+.+++.. .+.+|.++. .....|.|||++| .++.+.....- .. .+.. .+++.+
T Consensus 61 ar~l~k~~~~------------------GI~~P~l~~~D~~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~i 122 (229)
T KOG3087|consen 61 ARLLAKCRAL------------------GIPAPRLIFIDTYGGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRI 122 (229)
T ss_pred HHHHHHHHHh------------------CCCCceEEEEecCCCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHH
Confidence 9988888763 688999987 6778999999999 45555432211 11 1222 334433
Q ss_pred HHHHHHHHHhcCeeccCCCCCCeEEccCCCCc--eEEEeccccc
Q 002927 162 TRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHR--PILLDFGLTK 203 (864)
Q Consensus 162 ~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~--i~LiDFG~~~ 203 (864)
-+. +.-+|..+++|+||.-+||++.++ +++ +.|||||+..
T Consensus 123 G~~-igklH~ndiiHGDLTTSNill~~~-~~~~~~~lIdfgls~ 164 (229)
T KOG3087|consen 123 GEL-IGKLHDNDIIHGDLTTSNILLRSD-GNQITPILIDFGLSS 164 (229)
T ss_pred HHH-HHHhhhCCeecccccccceEEecC-CCcCceEEEeecchh
Confidence 333 556799999999999999999875 344 4899999854
No 372
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.05 E-value=4.2e-10 Score=123.45 Aligned_cols=148 Identities=24% Similarity=0.229 Sum_probs=101.2
Q ss_pred ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 10 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
++-||+|-|+.|-.|+.. +|+.|||||....-.+.+ . .. .+.+|
T Consensus 23 ekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~----s-------------------------t~------hlfqE 67 (864)
T KOG4717|consen 23 EKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTL----S-------------------------TG------HLFQE 67 (864)
T ss_pred hhhhcCCceehhhhhhhhcccceeEEEEecccccchh----h-------------------------hh------HHHHH
Confidence 467999999999999965 999999999653221110 0 00 12346
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
.+.++..++. ..|.+-+|+. .++.+|++|.=+|+.|.|+.--...|+.....-+...+++
T Consensus 68 VRCMKLVQHp-----------------NiVRLYEViDTQTKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~A 130 (864)
T KOG4717|consen 68 VRCMKLVQHP-----------------NIVRLYEVIDTQTKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHA 130 (864)
T ss_pred HHHHHHhcCc-----------------CeeeeeehhcccceEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHH
Confidence 6666665441 1244445554 6889999999999999998765555655332222222222
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHH
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMK 210 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r 210 (864)
+.+.|+..+|||||||+|+.+-+. -|-++|.|||+.-.+-+..+
T Consensus 131 I~YCHqLHVVHRDLKPENVVFFEK-lGlVKLTDFGFSNkf~PG~k 174 (864)
T KOG4717|consen 131 ISYCHQLHVVHRDLKPENVVFFEK-LGLVKLTDFGFSNKFQPGKK 174 (864)
T ss_pred HHHHhhhhhhcccCCcceeEEeee-cCceEeeeccccccCCCcch
Confidence 445577889999999999987653 58899999999987766544
No 373
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.05 E-value=7.1e-10 Score=125.31 Aligned_cols=140 Identities=17% Similarity=0.239 Sum_probs=97.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+-||+|.||.|-.|+.. +|.+||||+......+. ..+.. +.+|.
T Consensus 62 ~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~------------------------~~~~k-----------~~rev 106 (596)
T KOG0586|consen 62 KTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNP------------------------SKRQK-----------LGREV 106 (596)
T ss_pred eeeccceeEEEEeeEecCCCceEEEEEehhcccCh------------------------HHHHH-----------HHHHH
Confidence 56999999999999976 89999999765322111 00000 22344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCE-EEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHH---
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA--- 164 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v-~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~--- 164 (864)
+-+..+. ++++ .+-.++. ....||||||+.|+.+.+.. .+.+.+.+..++....-
T Consensus 107 ~imk~l~------------------HPnIvkl~~v~~t~~~lylV~eya~~ge~~~yl--~~~gr~~e~~ar~~F~q~vs 166 (596)
T KOG0586|consen 107 DIMKSLN------------------HPNIVKLFSVIETEATLYLVMEYASGGELFDYL--VKHGRMKEKEARAKFRQIVS 166 (596)
T ss_pred HHHHhcC------------------CcceeeeeeeeeecceeEEEEEeccCchhHHHH--HhcccchhhhhhhhhHHHHH
Confidence 4444432 3333 4444444 56688999999999998874 45555555555444332
Q ss_pred HHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 165 YAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 165 ~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
.++.+|.++|+|||||..|||++.+ ..++|.|||+...++.
T Consensus 167 aveYcH~k~ivHrdLk~eNilL~~~--mnikIaDfgfS~~~~~ 207 (596)
T KOG0586|consen 167 AVEYCHSKNIVHRDLKAENILLDEN--MNIKIADFGFSTFFDY 207 (596)
T ss_pred HHHHHhhcceeccccchhhcccccc--cceeeeccccceeecc
Confidence 2888999999999999999999965 7799999999988764
No 374
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.05 E-value=1.7e-09 Score=110.41 Aligned_cols=49 Identities=20% Similarity=0.365 Sum_probs=42.4
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHHHHHHHH
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKM 216 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l 216 (864)
++.+|..||.|||+||||++|+.+ .-++|+|||+++.-..+++..+..=
T Consensus 169 LKYLHsA~ILHRDIKPGNLLVNSN--CvLKICDFGLARvee~d~~~hMTqE 217 (449)
T KOG0664|consen 169 LKYLHTANILHRDIKPGNLLVNSN--CILKICDFGLARTWDQRDRLNMTHE 217 (449)
T ss_pred hHHHhhcchhhccCCCccEEeccC--ceEEecccccccccchhhhhhhHHH
Confidence 788999999999999999999965 8899999999998887777665443
No 375
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.05 E-value=1.1e-09 Score=116.47 Aligned_cols=139 Identities=14% Similarity=0.190 Sum_probs=94.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCC-hHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQG-IKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~-i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
+.|++|++|.||+++.+ +|+.||||..... ..... .-++.+|
T Consensus 6 ~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~------------------------------------~~~~~~e 49 (256)
T cd08218 6 KKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKE------------------------------------REESRKE 49 (256)
T ss_pred EEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHH------------------------------------HHHHHHH
Confidence 67999999999999976 7999999975421 10000 0013344
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITR 163 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~ 163 (864)
.+.++++.+ + .+++++ . ....+|||||++|.+|.+...... .......+...+.+
T Consensus 50 ~~~l~~l~~------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 109 (256)
T cd08218 50 VAVLSNMKH------------------P--NIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQ 109 (256)
T ss_pred HHHHHhCCC------------------C--CeeeeEeeecCCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHH
Confidence 444444322 1 123333 2 456889999999999887654322 23445555554444
Q ss_pred HH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 164 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 164 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+. +..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 110 l~~~l~~lh~~~i~h~~l~~~nil~~~~--~~~~l~d~~~~~~~~~ 153 (256)
T cd08218 110 ICLALKHVHDRKILHRDIKSQNIFLTKD--GTIKLGDFGIARVLNS 153 (256)
T ss_pred HHHHHHHHHhCCEecCCCCHHHEEEcCC--CCEEEeeccceeecCc
Confidence 44 678899999999999999999865 7899999999887654
No 376
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.05 E-value=6.2e-10 Score=119.93 Aligned_cols=144 Identities=17% Similarity=0.198 Sum_probs=92.3
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|.||+|+.. +|+.|++|..+....... . +-++.+|.
T Consensus 5 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~-----------------------------~------~~~~~~e~ 49 (283)
T cd05118 5 GKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEG-----------------------------I------PKTALREI 49 (283)
T ss_pred eeeecCCCceEEEEEcCCCCcEEEEEEeccccccch-----------------------------h------HHHHHHHH
Confidence 56999999999999975 799999998765432210 0 00122233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
..+.++.+. .-+.+...+. ....+++|||+++ ++.+.........+...+...+.+++ +
T Consensus 50 ~~l~~l~~~-----------------~i~~~~~~~~~~~~~~~v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l 111 (283)
T cd05118 50 KLLKELNHP-----------------NIIKLLDVFRHKGDLYLVFEFMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGL 111 (283)
T ss_pred HHHHHhcCC-----------------CcchHHHhhccCCCEEEEEeccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHH
Confidence 333333210 0111111111 4566899999987 66555432222445544444444433 6
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHH
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 209 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 209 (864)
..+|..|++|+|+||.||+++.+ +.++|+|||.+..+....
T Consensus 112 ~~LH~~~i~H~dl~p~nili~~~--~~~~l~df~~~~~~~~~~ 152 (283)
T cd05118 112 AFCHSHGILHRDLKPENLLINTE--GVLKLADFGLARSFGSPV 152 (283)
T ss_pred HHHHHCCeeecCcCHHHEEECCC--CcEEEeeeeeeEecCCCc
Confidence 78999999999999999999865 899999999988776543
No 377
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.05 E-value=5.3e-10 Score=118.48 Aligned_cols=140 Identities=15% Similarity=0.129 Sum_probs=93.1
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|+.|++|.||+++.+ +|+.||||+......... + ..++..|+
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~--~---------------------------------~~~~~~e~ 50 (256)
T cd08530 6 KKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQK--E---------------------------------REDAVNEI 50 (256)
T ss_pred eeecCCCceeEEEEEECCCCCEEEEEEEehhhccHH--H---------------------------------HHHHHHHH
Confidence 56999999999999865 889999998653221100 0 00122233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHh---hcCCCHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEIT 162 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~---~~~~~~~~l~~~~~ 162 (864)
+.+.++.+ ..|++++. ....++||||++|.+|.++.... ....+...+...+.
T Consensus 51 ~~l~~l~~--------------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 110 (256)
T cd08530 51 RILASVNH--------------------PNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFI 110 (256)
T ss_pred HHHHhCCC--------------------CCchhhhhhhccCCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHH
Confidence 33333221 12232221 45678999999999998875321 12345555555544
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+++ +..+|..|++|+|++|.||+++.+ ++++|+|||++..+..
T Consensus 111 ~l~~al~~lh~~~i~h~~l~~~ni~~~~~--~~~kl~d~g~~~~~~~ 155 (256)
T cd08530 111 QLLRGLQALHEQKILHRDLKSANILLVAN--DLVKIGDLGISKVLKK 155 (256)
T ss_pred HHHHHHHHHhhCCcccCCCCcceEEEecC--CcEEEeeccchhhhcc
Confidence 443 678899999999999999999864 8899999999876654
No 378
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.05 E-value=4.8e-10 Score=124.74 Aligned_cols=75 Identities=16% Similarity=0.271 Sum_probs=54.6
Q ss_pred CceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 128 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 128 ~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
..+++|||+++ ++.+.. ....+....+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++...
T Consensus 82 ~~~lv~e~~~~-~l~~~~--~~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~--~~~kl~dfg~~~~~ 156 (336)
T cd07849 82 DVYIVQELMET-DLYKLI--KTQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTN--CDLKICDFGLARIA 156 (336)
T ss_pred eEEEEehhccc-CHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCC--CCEEECcccceeec
Confidence 46899999986 443332 223345555444444443 788999999999999999999865 89999999998765
Q ss_pred Ch
Q 002927 206 SS 207 (864)
Q Consensus 206 ~~ 207 (864)
..
T Consensus 157 ~~ 158 (336)
T cd07849 157 DP 158 (336)
T ss_pred cc
Confidence 43
No 379
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.04 E-value=3.4e-10 Score=123.90 Aligned_cols=76 Identities=13% Similarity=0.221 Sum_probs=54.3
Q ss_pred ceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 129 TVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 129 ~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.++||||+++. +.+.........+...+...+.+++ +..+|..|++|+|++|+||+++++ +.++|+|||++....
T Consensus 90 ~~lv~~~~~~~-l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~--~~~~l~dfg~~~~~~ 166 (311)
T cd07866 90 VYMVTPYMDHD-LSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQ--GILKIADFGLARPYD 166 (311)
T ss_pred EEEEEecCCcC-HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC--CCEEECcCccchhcc
Confidence 47999999863 3222111122345555555444444 788999999999999999999865 899999999988654
Q ss_pred h
Q 002927 207 S 207 (864)
Q Consensus 207 ~ 207 (864)
.
T Consensus 167 ~ 167 (311)
T cd07866 167 G 167 (311)
T ss_pred C
Confidence 3
No 380
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.04 E-value=6.8e-10 Score=118.97 Aligned_cols=81 Identities=14% Similarity=0.323 Sum_probs=61.0
Q ss_pred cCCceEEEeecCCcCCCChHHH---hhcCCCHHHHHHHHHHHH--HHHHHh-cCeeccCCCCCCeEEccCCCCceEEEec
Q 002927 126 SSETVLILEFMDGIRLNDCESL---EAFGVNKQKVVEEITRAY--AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDF 199 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~---~~~~~~~~~l~~~~~~~~--l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDF 199 (864)
....+|+|||++|.+|.++... .....+...+...+.+++ +..+|. .|++|+|++|.||+++.+ ++++|+||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~--~~~~l~df 158 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGED--DKVTITDF 158 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCC--CcEEEecc
Confidence 5678899999999999887532 122345555555554444 677885 789999999999999865 89999999
Q ss_pred ccccccChH
Q 002927 200 GLTKKLSSS 208 (864)
Q Consensus 200 G~~~~l~~~ 208 (864)
|++......
T Consensus 159 g~~~~~~~~ 167 (269)
T cd08528 159 GLAKQKQPE 167 (269)
T ss_pred cceeecccc
Confidence 999876543
No 381
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.04 E-value=2.2e-10 Score=137.31 Aligned_cols=75 Identities=19% Similarity=0.289 Sum_probs=54.9
Q ss_pred ceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 129 TVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 129 ~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
-++-||||+-..+.++.......-++....+...+++ +.+||..|+||||+||.||+++++ +.|+|.|||++..+
T Consensus 671 LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~--~~VKIGDFGLAt~~ 747 (1351)
T KOG1035|consen 671 LYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSR--NSVKIGDFGLATDL 747 (1351)
T ss_pred EEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCC--CCeeecccccchhh
Confidence 3689999998777776543322212333333333333 778999999999999999999965 89999999999864
No 382
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.04 E-value=9.3e-10 Score=120.09 Aligned_cols=74 Identities=19% Similarity=0.301 Sum_probs=49.1
Q ss_pred ceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 129 TVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 129 ~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.+++||++.. .+.+.... ........+...+.+++ +..+|..|++|||+||.|||++.+ +.++|+|||+++.+.
T Consensus 102 ~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~--~~~~l~DFGla~~~~ 177 (294)
T PHA02882 102 RFILLEKLVE-NTKEIFKR-IKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGN--NRGYIIDYGIASHFI 177 (294)
T ss_pred EEEEEehhcc-CHHHHHHh-hccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC--CcEEEEEcCCceeec
Confidence 3678887643 33332211 11123333333333333 778999999999999999999854 889999999998764
No 383
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.03 E-value=7.5e-10 Score=123.01 Aligned_cols=139 Identities=20% Similarity=0.186 Sum_probs=90.5
Q ss_pred cccccccceeeEEEEec-C--CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHH
Q 002927 11 TPLATASIAQVHRATLV-D--GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 87 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~--G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~ 87 (864)
+.|++|++|.||+++.. + |+.||||+.+....... . .-++.+
T Consensus 6 ~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~-----------------------------~------~~~~~~ 50 (332)
T cd07857 6 KELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKI-----------------------------L------AKRALR 50 (332)
T ss_pred EEccccCCeEEEEEEeCCCCcCceEEEEEeccccccch-----------------------------h------HHHHHH
Confidence 57999999999999976 5 88999998653221100 0 001333
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--------cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHH
Q 002927 88 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVE 159 (864)
Q Consensus 88 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~ 159 (864)
|...+.++.+ ++ .|++++. ....+++|||+++ +|.+... ....++...+..
T Consensus 51 E~~~l~~l~~-----------------h~--~iv~~~~~~~~~~~~~~~~~~~~e~~~~-~L~~~l~-~~~~~~~~~~~~ 109 (332)
T cd07857 51 ELKLLRHFRG-----------------HK--NITCLYDMDIVFPGNFNELYLYEELMEA-DLHQIIR-SGQPLTDAHFQS 109 (332)
T ss_pred HHHHHHHhcC-----------------CC--ChheeeeeeeeccccCCcEEEEEecccC-CHHHHHh-cCCCCCHHHHHH
Confidence 5555554421 11 1112211 2345789999864 5555432 223455555555
Q ss_pred HHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 160 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 160 ~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
.+.+++ +..+|..|++|+|+||+|||++.+ +.++|+|||++..+..
T Consensus 110 ~~~qi~~aL~~LH~~givH~dlkp~Nili~~~--~~~kl~Dfg~a~~~~~ 157 (332)
T cd07857 110 FIYQILCGLKYIHSANVLHRDLKPGNLLVNAD--CELKICDFGLARGFSE 157 (332)
T ss_pred HHHHHHHHHHHHHhCCcccCCCCHHHeEEcCC--CCEEeCcCCCceeccc
Confidence 555544 788999999999999999999865 8999999999987654
No 384
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.03 E-value=4.7e-10 Score=125.30 Aligned_cols=75 Identities=23% Similarity=0.375 Sum_probs=56.8
Q ss_pred CceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 128 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 128 ~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
..++||||+ |.+|.++.. ...++...+...+.+++ +..+|..|++|+|++|.||+++.+ ++++|+|||++..+
T Consensus 94 ~~~lv~e~~-~~~L~~~~~--~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~--~~~kL~dfg~~~~~ 168 (343)
T cd07851 94 DVYLVTHLM-GADLNNIVK--CQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNED--CELKILDFGLARHT 168 (343)
T ss_pred cEEEEEecC-CCCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCC--CCEEEccccccccc
Confidence 368999998 557766543 23455555555544444 778999999999999999999865 89999999998766
Q ss_pred Ch
Q 002927 206 SS 207 (864)
Q Consensus 206 ~~ 207 (864)
..
T Consensus 169 ~~ 170 (343)
T cd07851 169 DD 170 (343)
T ss_pred cc
Confidence 43
No 385
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.03 E-value=1.4e-09 Score=117.42 Aligned_cols=144 Identities=19% Similarity=0.208 Sum_probs=91.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|+.|++|.||+|+.+ +|+.||||+.+......- . ..++.+|.
T Consensus 5 ~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~-----------------------------~------~~~~~~e~ 49 (287)
T cd07838 5 AEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEG-----------------------------I------PLSTLREI 49 (287)
T ss_pred EEecccCceEEEEEEECCCCCEEEEEEeccccccch-----------------------------h------hhhHHHHH
Confidence 56999999999999987 699999998764322100 0 00122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cC-----CceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SS-----ETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEI 161 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~-----~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~ 161 (864)
..+.+++.. +++. +.+..... .. ..+++|||++| +|.++..... ...+...+...+
T Consensus 50 ~~l~~l~~~---------------~h~~i~~~~~~~~~~~~~~~~~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~ 113 (287)
T cd07838 50 ALLKQLESF---------------EHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLM 113 (287)
T ss_pred HHHHHhhcc---------------CCCCcceEEEEEeeccCCCCceeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHH
Confidence 334443321 0111 12222222 12 27899999986 5655543211 234555555555
Q ss_pred HHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 162 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 162 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
.+++ +..+|..|++|+|++|+||+++.+ ++++|+|||++..++.
T Consensus 114 ~~i~~al~~LH~~~i~h~~l~~~nili~~~--~~~~l~dfg~~~~~~~ 159 (287)
T cd07838 114 RQLLRGVDFLHSHRIVHRDLKPQNILVTSD--GQVKIADFGLARIYSF 159 (287)
T ss_pred HHHHHHHHHHHHCCeeeccCChhhEEEccC--CCEEEeccCcceeccC
Confidence 5444 788999999999999999999965 8999999999877643
No 386
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.03 E-value=5.8e-10 Score=110.01 Aligned_cols=141 Identities=18% Similarity=0.223 Sum_probs=89.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
.-||.|.+|||-+-++. +|+..|||-.+..+.. ...+++..|+|..+
T Consensus 52 ~elGrGayG~vekmrh~~sg~imAvKri~~tvn~------------------------------q~q~r~L~dldi~~-- 99 (282)
T KOG0984|consen 52 EELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNS------------------------------QEQKRLLMDLDIIM-- 99 (282)
T ss_pred hhhcCCccchhhheeeccCCeEEEEeeehhhcCh------------------------------HHHHHHHHhhhhhc--
Confidence 35899999999998876 8999999954433321 11222233333321
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE----ecCCceEEEeecCCcCCCChHH--HhhcCCCHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI----QSSETVLILEFMDGIRLNDCES--LEAFGVNKQKVVEEITR 163 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~----~~~~~vLvmE~i~G~~L~~~~~--~~~~~~~~~~l~~~~~~ 163 (864)
+ ..+...+-..| .+.+-.+.||.++ .+|+.+.. +...+.-++.++-.++-
T Consensus 100 ----r-------------------~~~CPf~V~FyGa~~regdvwIcME~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~ 155 (282)
T KOG0984|consen 100 ----R-------------------TVDCPFTVHFYGALFREGDVWICMELMD-TSLDKFYRKVLKKGGTIPEDVLGKIAV 155 (282)
T ss_pred ----c-------------------CCCCCeEEEeehhhhccccEEEeHHHhh-hhHHHHHHHHHhcCCcCchHHhhHhHH
Confidence 1 11222333333 2788899999886 34443321 23333344444444444
Q ss_pred HH---HHHHH-hcCeeccCCCCCCeEEccCCCCceEEEecccccccChHH
Q 002927 164 AY---AHQIY-VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 209 (864)
Q Consensus 164 ~~---l~~i~-~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 209 (864)
.+ +..+| +..++|||+||+|||++.+ |+++++|||+++.+.+..
T Consensus 156 Svv~al~~L~~kL~vIHRDvKPsNiLIn~~--GqVKiCDFGIsG~L~dSi 203 (282)
T KOG0984|consen 156 SVVHALEFLHSKLSVIHRDVKPSNILINYD--GQVKICDFGISGYLVDSI 203 (282)
T ss_pred HHHHHHHHHHHHhhhhhccCCcceEEEccC--CcEEEcccccceeehhhh
Confidence 43 44455 4689999999999999976 999999999999987654
No 387
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.02 E-value=9.7e-10 Score=117.95 Aligned_cols=139 Identities=20% Similarity=0.213 Sum_probs=90.2
Q ss_pred cccccccceeeEEEEec----CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHH
Q 002927 11 TPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 86 (864)
Q Consensus 11 ~plasaSigqV~~A~l~----~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 86 (864)
+.|+.|++|.||+|.++ +|+.||||+.+......... -++.
T Consensus 5 ~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~-----------------------------------~~~~ 49 (273)
T cd05074 5 RMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDI-----------------------------------EEFL 49 (273)
T ss_pred hcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHH-----------------------------------HHHH
Confidence 57999999999999864 47899999876543221100 0133
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---c----C---CceEEEeecCCcCCCChHHHhhc-----C
Q 002927 87 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---S----S---ETVLILEFMDGIRLNDCESLEAF-----G 151 (864)
Q Consensus 87 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~----~---~~vLvmE~i~G~~L~~~~~~~~~-----~ 151 (864)
+|.+.++++.+ + .+.+++. . + ..++++||.++.+|.+....... .
T Consensus 50 ~E~~~l~~l~h------------------~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 109 (273)
T cd05074 50 REAACMKEFDH------------------P--NVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFT 109 (273)
T ss_pred HHHHHHhcCCC------------------C--CcceEEEEEccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCC
Confidence 45544444422 1 1222322 1 1 12689999999988766432211 2
Q ss_pred CCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 152 VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 152 ~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.+...+...+.++. +..+|..|++|+|++|.||+++.+ +.++|+|||.+..+.
T Consensus 110 l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~--~~~kl~dfg~~~~~~ 164 (273)
T cd05074 110 LPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNEN--MTVCVADFGLSKKIY 164 (273)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCC--CCEEECccccccccc
Confidence 33444444444433 778899999999999999999854 889999999988653
No 388
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.02 E-value=1.2e-09 Score=118.05 Aligned_cols=139 Identities=19% Similarity=0.183 Sum_probs=91.2
Q ss_pred cccccccceeeEEEEec------CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 11 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 11 ~plasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
+.||.|++|.||++..+ ++..|++|+........ .-+
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~-------------------------------------~~~ 53 (280)
T cd05092 11 WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESA-------------------------------------RQD 53 (280)
T ss_pred cccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHH-------------------------------------HHH
Confidence 67999999999999742 46689999754321110 012
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhh-------------
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA------------- 149 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~------------- 149 (864)
+.+|.+.+.++.+ +. +.+..... ....+++|||++|.+|.++.....
T Consensus 54 ~~~e~~~l~~l~h------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~ 115 (280)
T cd05092 54 FQREAELLTVLQH------------------QHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVA 115 (280)
T ss_pred HHHHHHHHhcCCC------------------CCCceEEEEEecCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCC
Confidence 4455555554422 11 11112222 456789999999999987754221
Q ss_pred -cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 150 -FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 150 -~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..++...+...+.++. +..+|..|++|+|++|.||+++++ +.++|+|||++..+.
T Consensus 116 ~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~--~~~kL~dfg~~~~~~ 173 (280)
T cd05092 116 PGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQG--LVVKIGDFGMSRDIY 173 (280)
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCC--CCEEECCCCceeEcC
Confidence 1133444444444433 678899999999999999999865 899999999987654
No 389
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.02 E-value=1.1e-09 Score=118.30 Aligned_cols=139 Identities=14% Similarity=0.149 Sum_probs=95.0
Q ss_pred cccccccceeeEEEEecC-----CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 11 TPLATASIAQVHRATLVD-----GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~-----G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
+-|++|++|.||+|...+ ++.|++|+.+........ -.+
T Consensus 12 ~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~------------------------------------~~~ 55 (280)
T cd05043 12 DLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQV------------------------------------TLL 55 (280)
T ss_pred eeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHH------------------------------------HHH
Confidence 669999999999999765 788999986643321110 113
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-----cCCceEEEeecCCcCCCChHHHhh-------cCCC
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-----SSETVLILEFMDGIRLNDCESLEA-------FGVN 153 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-----~~~~vLvmE~i~G~~L~~~~~~~~-------~~~~ 153 (864)
.+|+..+.++.+ ++ +.+++. ....++++||+++.+|.+...... ..+.
T Consensus 56 ~~e~~~l~~l~h------------------~n--i~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~ 115 (280)
T cd05043 56 LQESCLLYGLSH------------------QN--ILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALS 115 (280)
T ss_pred HHHHHHHHhCCC------------------CC--CCeEEEEEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCC
Confidence 345555454422 11 222221 356789999999999988754322 1244
Q ss_pred HHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 154 KQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 154 ~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
...+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||+++.+.+
T Consensus 116 ~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~--~~~kl~d~g~~~~~~~ 169 (280)
T cd05043 116 TQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEE--LQVKITDNALSRDLFP 169 (280)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCC--CcEEECCCCCcccccC
Confidence 555555544444 788999999999999999999865 8999999999886643
No 390
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.01 E-value=1.2e-09 Score=121.24 Aligned_cols=139 Identities=16% Similarity=0.208 Sum_probs=88.7
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
++|+.|++|.||+|+.+ +|+.||||+......... ..-++..|.
T Consensus 16 ~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~-----------------------------------~~~~~~~E~ 60 (328)
T cd07856 16 QPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPV-----------------------------------LAKRTYREL 60 (328)
T ss_pred EeecccCCeEEEEEEECCCCCEEEEEEecccccccc-----------------------------------hhHHHHHHH
Confidence 78999999999999976 899999997543211000 001123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
..+.++.+ ..-+.+...+. ....+++|||+. .+|.++.. ........+...+.+++
T Consensus 61 ~~l~~l~h-----------------pniv~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~--~~~~~~~~~~~~~~ql~~a 120 (328)
T cd07856 61 KLLKHLRH-----------------ENIISLSDIFISPLEDIYFVTELLG-TDLHRLLT--SRPLEKQFIQYFLYQILRG 120 (328)
T ss_pred HHHHhcCC-----------------CCeeeEeeeEecCCCcEEEEeehhc-cCHHHHHh--cCCCCHHHHHHHHHHHHHH
Confidence 44444432 11233333332 345789999985 46655432 22334333333333332
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|+|++|.||+++.+ +.++|+|||++....
T Consensus 121 L~~LH~~~iiH~dl~p~Nili~~~--~~~~l~dfg~~~~~~ 159 (328)
T cd07856 121 LKYVHSAGVVHRDLKPSNILINEN--CDLKICDFGLARIQD 159 (328)
T ss_pred HHHHHhCCcccCCCCHHHEeECCC--CCEEeCccccccccC
Confidence 778999999999999999999865 899999999987554
No 391
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.01 E-value=1.6e-09 Score=120.17 Aligned_cols=137 Identities=16% Similarity=0.111 Sum_probs=88.4
Q ss_pred ccccc--cceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 12 PLATA--SIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 12 plasa--SigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
-||.| ++++||+|+.. +|+.||||+....-...- .. + .+.+|
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~--~~---------------------------~------~~~~e 49 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEE--HL---------------------------K------ALQNE 49 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHH--HH---------------------------H------HHHHH
Confidence 35556 99999999975 899999998764321100 00 0 12334
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHh-hcCCCHHHHHHHHHHHH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY 165 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~l~~~~~~~~ 165 (864)
+.-+..+. +++ +.+..++. ....+++|||+.|.++.++.... ..+.+...+...+.+++
T Consensus 50 ~~~~~~l~------------------h~niv~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~ 111 (328)
T cd08226 50 VVLSHFFR------------------HPNIMTSWTVFTTGSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGAL 111 (328)
T ss_pred HHHHHhCC------------------CCCcceEeeeEecCCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHH
Confidence 33333222 222 23333333 45678999999999998775422 12345554444444443
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
+..+|..|++|+|+||+||++..+ +.+++.|||.+.
T Consensus 112 ~aL~~lH~~~ivHrDlkp~Nill~~~--~~~~~~~~~~~~ 149 (328)
T cd08226 112 RGLNYLHQNGYIHRNIKASHILISGD--GLVSLSGLSHLY 149 (328)
T ss_pred HHHHHHHhCCeecCCCCHHHEEEeCC--CcEEEechHHHh
Confidence 778899999999999999999865 889999997643
No 392
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=98.99 E-value=5.2e-10 Score=124.39 Aligned_cols=140 Identities=16% Similarity=0.235 Sum_probs=88.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|.||+|+.+ +|+.||||+........ . ... .+..|.
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~-----~------------------------~~~------~~~~e~ 55 (334)
T cd07855 11 ENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVP-----T------------------------LAK------RTLREL 55 (334)
T ss_pred eeeecCCCeEEEEEEEcCCCCEEEEEEeccccccc-----c------------------------chH------HHHHHH
Confidence 67999999999999976 79999999865422110 0 000 012233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 164 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~ 164 (864)
..+.++.+.. -+.+..++. ....++||||+.| .|.++... ........+...+.++
T Consensus 56 ~~l~~l~h~~-----------------iv~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~-~~~~~~~~~~~i~~qi 116 (334)
T cd07855 56 KILRHFKHDN-----------------IIAIRDILRPPGADFKDVYVVMDLMES-DLHHIIHS-DQPLTEEHIRYFLYQL 116 (334)
T ss_pred HHHHhcCCCC-----------------ccCHHHhccccCCCCceEEEEEehhhh-hHHHHhcc-CCCCCHHHHHHHHHHH
Confidence 3333332100 011111111 2345799999976 56554321 2234444444444443
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 117 ~~aL~~LH~~~ivH~dlkp~Nil~~~~--~~~kl~dfg~~~~~~ 158 (334)
T cd07855 117 LRGLKYIHSANVIHRDLKPSNLLVNED--CELRIGDFGMARGLS 158 (334)
T ss_pred HHHHHHHHHCCeecCCCCHHHEEEcCC--CcEEecccccceeec
Confidence 3 778899999999999999999865 899999999987654
No 393
>PHA03210 serine/threonine kinase US3; Provisional
Probab=98.99 E-value=8e-10 Score=129.85 Aligned_cols=79 Identities=19% Similarity=0.147 Sum_probs=52.1
Q ss_pred cCCceEEEeecCCcCCCChHHHhhc----CCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEec
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAF----GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDF 199 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~----~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDF 199 (864)
....+++||++.+. +.+....... ......+...+.+++ +..+|..||+|||+||.|||++.+ +.++|+||
T Consensus 235 ~~~~~lv~e~~~~~-l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~--~~vkL~DF 311 (501)
T PHA03210 235 EANTYMITQKYDFD-LYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCD--GKIVLGDF 311 (501)
T ss_pred CCeeEEEEeccccC-HHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC--CCEEEEeC
Confidence 45678999998653 3222111100 011122222233322 788999999999999999999865 89999999
Q ss_pred ccccccCh
Q 002927 200 GLTKKLSS 207 (864)
Q Consensus 200 G~~~~l~~ 207 (864)
|++..+..
T Consensus 312 Gla~~~~~ 319 (501)
T PHA03210 312 GTAMPFEK 319 (501)
T ss_pred CCceecCc
Confidence 99987654
No 394
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=98.99 E-value=1e-09 Score=116.54 Aligned_cols=142 Identities=15% Similarity=0.163 Sum_probs=91.6
Q ss_pred ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 10 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
.++|++|++|.||+++.+ +|..||+|.....-... . .+-.+.+|
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~---------------------------------~~~~~~~E 49 (257)
T cd08225 5 IKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPV--K---------------------------------EKEASKKE 49 (257)
T ss_pred EEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccc--h---------------------------------hhHHHHHH
Confidence 367999999999999986 78999999754310000 0 00012334
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhc-CCCHHHHHHHHHH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAF-GVNKQKVVEEITR 163 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~-~~~~~~l~~~~~~ 163 (864)
+..++++++ ..+.+++ . ....+|+|||++|.+|.++...... ..+...+...+.+
T Consensus 50 ~~~l~~~~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~ 109 (257)
T cd08225 50 VILLAKMKH--------------------PNIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQ 109 (257)
T ss_pred HHHHHhCCC--------------------CChhhhhheeccCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHH
Confidence 444444322 1112222 1 4557899999999999887543221 2344444444443
Q ss_pred HH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 164 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 164 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+. +..+|..|++|+|++|.||+++++ +..++|+|||.+..+..
T Consensus 110 l~~~l~~lh~~~i~H~dl~~~nil~~~~-~~~~~l~d~~~~~~~~~ 154 (257)
T cd08225 110 ISLGLKHIHDRKILHRDIKSQNIFLSKN-GMVAKLGDFGIARQLND 154 (257)
T ss_pred HHHHHHHHHHCCcccccCCHHHEEEcCC-CCeEEecccccchhccC
Confidence 33 678899999999999999999864 23568999998876644
No 395
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=98.99 E-value=5.4e-10 Score=121.11 Aligned_cols=74 Identities=20% Similarity=0.443 Sum_probs=56.8
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
....++||||.+-....++.. .++...+...+...+ +.++|..||+|||+||+|++.+.. .++-+|+|||++.
T Consensus 107 nd~v~ivlp~~~H~~f~~l~~----~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~-t~rg~LvDFgLA~ 181 (418)
T KOG1167|consen 107 NDQVAIVLPYFEHDRFRDLYR----SLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRR-TQRGVLVDFGLAQ 181 (418)
T ss_pred CCeeEEEecccCccCHHHHHh----cCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccc-cCCceEEechhHH
Confidence 345578999998766666532 344555555555544 888999999999999999999875 5889999999987
Q ss_pred c
Q 002927 204 K 204 (864)
Q Consensus 204 ~ 204 (864)
.
T Consensus 182 ~ 182 (418)
T KOG1167|consen 182 R 182 (418)
T ss_pred H
Confidence 6
No 396
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=98.99 E-value=1.2e-09 Score=119.88 Aligned_cols=145 Identities=15% Similarity=0.167 Sum_probs=88.7
Q ss_pred cccccccceeeEEEEec---CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHH
Q 002927 11 TPLATASIAQVHRATLV---DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 87 (864)
Q Consensus 11 ~plasaSigqV~~A~l~---~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~ 87 (864)
+.|++|++|.||+|+.+ +|+.||||+.++..... +.+.. .+.+
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~----------------------------~~~~~------~~~~ 51 (316)
T cd07842 6 GCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQY----------------------------TGISQ------SACR 51 (316)
T ss_pred EEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccc----------------------------cCccH------HHHH
Confidence 45999999999999975 48999999877643100 00000 0223
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-c--CCceEEEeecCCcCCCChHHHhh----cCCCHHHHHHH
Q 002927 88 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S--SETVLILEFMDGIRLNDCESLEA----FGVNKQKVVEE 160 (864)
Q Consensus 88 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~--~~~vLvmE~i~G~~L~~~~~~~~----~~~~~~~l~~~ 160 (864)
|+.-+.++.+. .-+.+...+. . ...+|||||+++. +.++..... ..+....+...
T Consensus 52 e~~~l~~l~h~-----------------~i~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~i 113 (316)
T cd07842 52 EIALLRELKHE-----------------NVVSLVEVFLEHADKSVYLLFDYAEHD-LWQIIKFHRQAKRVSIPPSMVKSL 113 (316)
T ss_pred HHHHHHhcCCC-----------------CccceEEEEeCCCCceEEEEEeCCCcC-HHHHHHhhccCCCcCcCHHHHHHH
Confidence 44444443221 1122333332 3 4578999999863 333321111 12334444444
Q ss_pred HHHHH--HHHHHhcCeeccCCCCCCeEEccCC--CCceEEEecccccccCh
Q 002927 161 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDP--PHRPILLDFGLTKKLSS 207 (864)
Q Consensus 161 ~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~--~g~i~LiDFG~~~~l~~ 207 (864)
+.+++ +..+|..|++|+|++|.||+++.++ ++.++|+|||++..+..
T Consensus 114 ~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~ 164 (316)
T cd07842 114 LWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNA 164 (316)
T ss_pred HHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCC
Confidence 43433 7788999999999999999998611 38899999999886643
No 397
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=98.98 E-value=7.6e-10 Score=122.62 Aligned_cols=77 Identities=16% Similarity=0.286 Sum_probs=56.4
Q ss_pred CceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 128 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 128 ~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
..+++|||+++ +|.++.. ....++...+...+.+++ +..+|..|++|+|+||.||+++.+ ++++|+|||++...
T Consensus 78 ~~~lv~e~~~~-~l~~~l~-~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~--~~~~L~dfg~~~~~ 153 (330)
T cd07834 78 DVYIVTELMET-DLHKVIK-SPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSN--CDLKICDFGLARGV 153 (330)
T ss_pred ceEEEecchhh-hHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC--CCEEEcccCceEee
Confidence 45899999985 5555432 112344444444444433 678899999999999999999865 89999999999877
Q ss_pred ChH
Q 002927 206 SSS 208 (864)
Q Consensus 206 ~~~ 208 (864)
...
T Consensus 154 ~~~ 156 (330)
T cd07834 154 DPD 156 (330)
T ss_pred ccc
Confidence 654
No 398
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=98.98 E-value=4.2e-10 Score=115.01 Aligned_cols=157 Identities=16% Similarity=0.212 Sum_probs=104.0
Q ss_pred ccccccc-cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHh
Q 002927 4 MFMDFVE-TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPK 81 (864)
Q Consensus 4 ~F~~fd~-~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~ 81 (864)
-|+..++ +-+|.|..+.|.|...+ +|.+.|+|+.--....... +-..++.+...+
T Consensus 15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~-----------------------e~~~~~~EaT~~ 71 (411)
T KOG0599|consen 15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESG-----------------------ETPYEMREATRQ 71 (411)
T ss_pred HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCC-----------------------ccHHHHHHHHHH
Confidence 4555665 67899999999999876 8899999986432221100 012334444444
Q ss_pred hccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEec-CCceEEEeecCCcCCCChHHHhhcCCC---HHH
Q 002927 82 ELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQS-SETVLILEFMDGIRLNDCESLEAFGVN---KQK 156 (864)
Q Consensus 82 Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~~-~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ 156 (864)
|++..+ ++. ++|. +.+-.+|.+ +-..||.|.++-+.|.|++... -.+. ...
T Consensus 72 Ev~ILR------qv~-----------------GHP~II~l~D~yes~sF~FlVFdl~prGELFDyLts~-VtlSEK~tR~ 127 (411)
T KOG0599|consen 72 EISILR------QVM-----------------GHPYIIDLQDVYESDAFVFLVFDLMPRGELFDYLTSK-VTLSEKETRR 127 (411)
T ss_pred HHHHHH------Hhc-----------------CCCcEEEeeeeccCcchhhhhhhhcccchHHHHhhhh-eeecHHHHHH
Confidence 443322 221 2333 445566664 4467999999999999885421 1222 234
Q ss_pred HHHHHHHHHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHH
Q 002927 157 VVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMK 210 (864)
Q Consensus 157 l~~~~~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r 210 (864)
+++.+.+. +..+|..+|+|||+||+|||++++ .+|+|.|||.++++.+..+
T Consensus 128 iMrqlfeg-VeylHa~~IVHRDLKpENILlddn--~~i~isDFGFa~~l~~Gek 178 (411)
T KOG0599|consen 128 IMRQLFEG-VEYLHARNIVHRDLKPENILLDDN--MNIKISDFGFACQLEPGEK 178 (411)
T ss_pred HHHHHHHH-HHHHHHhhhhhcccChhheeeccc--cceEEeccceeeccCCchh
Confidence 55555544 667899999999999999999865 8999999999999987544
No 399
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=98.98 E-value=1.5e-09 Score=118.45 Aligned_cols=79 Identities=19% Similarity=0.266 Sum_probs=55.0
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHh-cCeeccCCCCCCeEEccCCCCceEEEecccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLT 202 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~ 202 (864)
....+++|||+++ .+.++........+...+...+.+++ +..+|. .|++|+|++|.||+++.+ +.++|+|||++
T Consensus 86 ~~~~~~v~e~~~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~--~~~kL~dfg~~ 162 (296)
T cd06618 86 DSDVFICMELMST-CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDAS--GNVKLCDFGIS 162 (296)
T ss_pred CCeEEEEeeccCc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCC--CCEEECccccc
Confidence 4567899999865 45444332222344444444444433 677886 699999999999999854 89999999998
Q ss_pred cccCh
Q 002927 203 KKLSS 207 (864)
Q Consensus 203 ~~l~~ 207 (864)
..+..
T Consensus 163 ~~~~~ 167 (296)
T cd06618 163 GRLVD 167 (296)
T ss_pred hhccC
Confidence 76643
No 400
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=98.98 E-value=1e-09 Score=122.46 Aligned_cols=75 Identities=16% Similarity=0.250 Sum_probs=53.7
Q ss_pred CceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 128 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 128 ~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
..+++|||+++ +|.+.. ....+....+...+.+++ +..+|..|++|+|+||+||+++.+ ++.++|+|||++..+
T Consensus 90 ~~~lv~e~~~~-~L~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~-~~~~kl~dfg~~~~~ 165 (342)
T cd07854 90 SVYIVQEYMET-DLANVL--EQGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTE-DLVLKIGDFGLARIV 165 (342)
T ss_pred eEEEEeecccc-cHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCC-CceEEECCcccceec
Confidence 35799999985 554442 222344444444444433 778899999999999999999754 367899999998766
Q ss_pred C
Q 002927 206 S 206 (864)
Q Consensus 206 ~ 206 (864)
.
T Consensus 166 ~ 166 (342)
T cd07854 166 D 166 (342)
T ss_pred C
Confidence 4
No 401
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=98.98 E-value=3.8e-10 Score=129.62 Aligned_cols=144 Identities=19% Similarity=0.205 Sum_probs=108.5
Q ss_pred ccccccccceeeEEEEec-CC---CEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 10 ETPLATASIAQVHRATLV-DG---RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-~G---~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
++.||+|.||.|++|+|+ .| ..||||.++-|..+..+ .||
T Consensus 634 e~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gytekqr------------------------------------rdF 677 (996)
T KOG0196|consen 634 EKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQR------------------------------------RDF 677 (996)
T ss_pred EEEEecccccceecccccCCCCcceeEEEeeeccCccHHHH------------------------------------hhh
Confidence 478999999999999997 34 57999999988876543 347
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHH--HH
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVE--EI 161 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~--~~ 161 (864)
..||.-+-+|.| ++ +++--|.- +..-.++.||++.++|+.+++....++..-++.. +.
T Consensus 678 L~EAsIMGQFdH------------------PNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrG 739 (996)
T KOG0196|consen 678 LSEASIMGQFDH------------------PNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRG 739 (996)
T ss_pred hhhhhhcccCCC------------------CcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHH
Confidence 778877666532 33 33444444 4556689999999999999876655555444443 34
Q ss_pred HHHHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHH
Q 002927 162 TRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 209 (864)
Q Consensus 162 ~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 209 (864)
+.+-++.+-..|+|||||-.-||||+.+ -.-++.|||+++.+.++.
T Consensus 740 IAsGMkYLsdm~YVHRDLAARNILVNsn--LvCKVsDFGLSRvledd~ 785 (996)
T KOG0196|consen 740 IASGMKYLSDMNYVHRDLAARNILVNSN--LVCKVSDFGLSRVLEDDP 785 (996)
T ss_pred HHHHhHHHhhcCchhhhhhhhheeeccc--eEEEeccccceeecccCC
Confidence 4455888889999999999999999854 556799999999886554
No 402
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=98.98 E-value=4.1e-10 Score=112.49 Aligned_cols=143 Identities=15% Similarity=0.243 Sum_probs=95.2
Q ss_pred cccccccceeeEEEEe-cCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+-+|.|-++.|+.|.. .+.+.++||+++|--.+.+.++++||+.+.. .-++..+++
T Consensus 44 rk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkkkKIkREikIL~nL~g-------g~NIi~L~D---------------- 100 (338)
T KOG0668|consen 44 RKVGRGKYSEVFEGINITNNEKCVIKILKPVKKKKIKREIKILQNLRG-------GPNIIKLLD---------------- 100 (338)
T ss_pred HHHcCccHhhHhcccccCCCceEEEeeechHHHHHHHHHHHHHHhccC-------CCCeeehhh----------------
Confidence 5689999999999995 4789999999999999888888887765531 011111110
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQI 169 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~l~~i 169 (864)
... ++. +....|+.||++......+-.. -...|..--...++.+ +..+
T Consensus 101 --------iV~--------------Dp~--------SktpaLiFE~v~n~Dfk~ly~t-l~d~dIryY~~elLkA-LdyC 148 (338)
T KOG0668|consen 101 --------IVK--------------DPE--------SKTPSLIFEYVNNTDFKQLYPT-LTDYDIRYYIYELLKA-LDYC 148 (338)
T ss_pred --------hhc--------------Ccc--------ccCchhHhhhhccccHHHHhhh-hchhhHHHHHHHHHHH-HhHH
Confidence 000 111 3334589999987655443211 1112222222233322 7778
Q ss_pred HhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHH
Q 002927 170 YVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 209 (864)
Q Consensus 170 ~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 209 (864)
|+.||+|||.||-|+|++.. ..++.|||||++-...+..
T Consensus 149 HS~GImHRDVKPhNvmIdh~-~rkLrlIDWGLAEFYHp~~ 187 (338)
T KOG0668|consen 149 HSMGIMHRDVKPHNVMIDHE-LRKLRLIDWGLAEFYHPGK 187 (338)
T ss_pred HhcCcccccCCcceeeechh-hceeeeeecchHhhcCCCc
Confidence 99999999999999999975 4789999999987766543
No 403
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=98.98 E-value=1.3e-09 Score=121.40 Aligned_cols=76 Identities=18% Similarity=0.293 Sum_probs=55.1
Q ss_pred CceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 128 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 128 ~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
..+|+|||+.| .|.++.. ....+....+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++...
T Consensus 83 ~~~lv~e~~~~-~L~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~--~~~kL~Dfg~~~~~ 158 (337)
T cd07858 83 DVYIVYELMDT-DLHQIIR-SSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNAN--CDLKICDFGLARTT 158 (337)
T ss_pred cEEEEEeCCCC-CHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCC--CCEEECcCcccccc
Confidence 46899999975 5544432 122344554444444443 778999999999999999999865 89999999998766
Q ss_pred Ch
Q 002927 206 SS 207 (864)
Q Consensus 206 ~~ 207 (864)
..
T Consensus 159 ~~ 160 (337)
T cd07858 159 SE 160 (337)
T ss_pred CC
Confidence 43
No 404
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=98.97 E-value=2.7e-09 Score=114.86 Aligned_cols=78 Identities=18% Similarity=0.243 Sum_probs=58.9
Q ss_pred CCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 127 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 127 ~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
...++||||+++ +|.++........+...+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++..
T Consensus 71 ~~~~~v~e~~~~-~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~--~~~~l~d~g~~~~ 147 (282)
T cd07829 71 RKLYLVFEYCDM-DLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRD--GVLKLADFGLARA 147 (282)
T ss_pred CceEEEecCcCc-CHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCC--CCEEEecCCcccc
Confidence 456899999986 77776543222455555555444443 788999999999999999999865 8999999999876
Q ss_pred cCh
Q 002927 205 LSS 207 (864)
Q Consensus 205 l~~ 207 (864)
+..
T Consensus 148 ~~~ 150 (282)
T cd07829 148 FGI 150 (282)
T ss_pred cCC
Confidence 644
No 405
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=98.97 E-value=2.2e-09 Score=119.50 Aligned_cols=140 Identities=20% Similarity=0.201 Sum_probs=88.7
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|.||+|+.. +|+.||||.........- ....+.+|+
T Consensus 13 ~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~-----------------------------------~~~~~~~E~ 57 (337)
T cd07852 13 QKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNAT-----------------------------------DAQRTFREI 57 (337)
T ss_pred HhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcch-----------------------------------hhhhhhHHH
Confidence 67999999999999976 789999997643211000 000133455
Q ss_pred HHHHHH-HHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIV-SANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~-~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..+.++ .+. .-+.+..++. ....+|||||++| +|.+... ....+.......+.+++
T Consensus 58 ~~l~~l~~h~-----------------ni~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~--~~~~~~~~~~~i~~qi~ 117 (337)
T cd07852 58 MFLQELGDHP-----------------NIVKLLNVIKAENDKDIYLVFEYMET-DLHAVIR--ANILEDVHKRYIMYQLL 117 (337)
T ss_pred HHHHHhcCCC-----------------CccceeeeeccCCCceEEEEeccccc-CHHHHHh--cCCCCHHHHHHHHHHHH
Confidence 555555 220 0122222222 1235899999986 6655432 22334333333333332
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 118 ~~L~~LH~~~i~H~dl~p~nill~~~--~~~kl~d~g~~~~~~~ 159 (337)
T cd07852 118 KALKYIHSGNVIHRDLKPSNILLNSD--CRVKLADFGLARSLSE 159 (337)
T ss_pred HHHHHHHHCCeecCCCCHHHEEEcCC--CcEEEeeccchhcccc
Confidence 678899999999999999999865 8999999999886643
No 406
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=98.96 E-value=1.3e-09 Score=113.65 Aligned_cols=79 Identities=23% Similarity=0.361 Sum_probs=61.8
Q ss_pred CCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 127 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 127 ~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
...+++|||+++.+|.++..... ..+...+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||.+..
T Consensus 60 ~~~~l~~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~--~~~~l~d~~~~~~ 136 (244)
T smart00220 60 DKLYLVMEYCDGGDLFDLLKKRG-RLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDED--GHVKLADFGLARQ 136 (244)
T ss_pred CEEEEEEeCCCCCCHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCC--CcEEEccccceee
Confidence 56789999999999988754322 245555555554443 778899999999999999999865 8999999999988
Q ss_pred cChH
Q 002927 205 LSSS 208 (864)
Q Consensus 205 l~~~ 208 (864)
+...
T Consensus 137 ~~~~ 140 (244)
T smart00220 137 LDPG 140 (244)
T ss_pred eccc
Confidence 7654
No 407
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.96 E-value=1.9e-10 Score=116.32 Aligned_cols=75 Identities=21% Similarity=0.332 Sum_probs=52.8
Q ss_pred CCceEEEeecCCcCCCChHHHhh---cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccc
Q 002927 127 SETVLILEFMDGIRLNDCESLEA---FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGL 201 (864)
Q Consensus 127 ~~~vLvmE~i~G~~L~~~~~~~~---~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~ 201 (864)
...+|||.+|+ .|+..+-. ..+....+-+.+-.+. +..||+..++|||+||.|+||+.+ |.++|.|||+
T Consensus 97 ~t~ylVf~~ce----hDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~d--gilklADFGl 170 (376)
T KOG0669|consen 97 ATFYLVFDFCE----HDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKD--GILKLADFGL 170 (376)
T ss_pred ceeeeeHHHhh----hhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCC--ceEEeecccc
Confidence 34689999998 34432211 1233333333332222 778999999999999999999966 8999999999
Q ss_pred ccccCh
Q 002927 202 TKKLSS 207 (864)
Q Consensus 202 ~~~l~~ 207 (864)
++.++.
T Consensus 171 ar~fs~ 176 (376)
T KOG0669|consen 171 ARAFST 176 (376)
T ss_pred ccceec
Confidence 987764
No 408
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.93 E-value=2.8e-10 Score=127.24 Aligned_cols=81 Identities=17% Similarity=0.222 Sum_probs=61.3
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
.++.++..|||.|+.++.+.-.-..++...++--.+-+.+ |..+|...|||||||.||||++-+ |.|.|.|||.+.
T Consensus 101 enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~Tld--GdirLADFGVSA 178 (1187)
T KOG0579|consen 101 ENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLD--GDIRLADFGVSA 178 (1187)
T ss_pred cCceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEec--CcEeeecccccc
Confidence 6677899999999999877543334444444433333333 778899999999999999999976 899999999887
Q ss_pred ccChH
Q 002927 204 KLSSS 208 (864)
Q Consensus 204 ~l~~~ 208 (864)
....+
T Consensus 179 Kn~~t 183 (1187)
T KOG0579|consen 179 KNKST 183 (1187)
T ss_pred cchhH
Confidence 66543
No 409
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=98.91 E-value=6.4e-10 Score=134.12 Aligned_cols=141 Identities=15% Similarity=0.129 Sum_probs=90.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEec--CChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQH--QGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 87 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~--p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~ 87 (864)
.-||.|-||+||-|... +|+-.|||-.+ |+..+ .+.. ...
T Consensus 1241 ~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k---------------------------~~~~----------i~e 1283 (1509)
T KOG4645|consen 1241 NFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHK---------------------------TFKL----------IAE 1283 (1509)
T ss_pred cccCCcceeeeEEeecCCccchhhhhhhhcCccccc---------------------------cCcc----------hHH
Confidence 45899999999999965 79999999322 11100 0000 123
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH---HH
Q 002927 88 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT---RA 164 (864)
Q Consensus 88 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~---~~ 164 (864)
|.+.++.+.|... -.+..|.|. ..+-+|-||||+|++|+++.... +...+.+.+... -.
T Consensus 1284 Em~vlE~lnHpNl------------V~YyGVEvH----Rekv~IFMEyC~~GsLa~ll~~g--ri~dE~vt~vyt~qll~ 1345 (1509)
T KOG4645|consen 1284 EMKVLEGLNHPNL------------VRYYGVEVH----REKVYIFMEYCEGGSLASLLEHG--RIEDEMVTRVYTKQLLE 1345 (1509)
T ss_pred HHHHHHhccCccc------------cccCceeec----HHHHHHHHHHhccCcHHHHHHhc--chhhhhHHHHHHHHHHH
Confidence 5556666544210 001111111 45567899999999999985432 222222222211 12
Q ss_pred HHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 165 YAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 165 ~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
-+..+|++|||||||||.||+++.. |-|++.|||++..+...
T Consensus 1346 gla~LH~~gIVHRDIK~aNI~Ld~~--g~iK~~DFGsa~ki~~~ 1387 (1509)
T KOG4645|consen 1346 GLAYLHEHGIVHRDIKPANILLDFN--GLIKYGDFGSAVKIKNN 1387 (1509)
T ss_pred HHHHHHhcCceecCCCccceeeecC--CcEEeecccceeEecCc
Confidence 2667899999999999999999965 89999999999988765
No 410
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=98.91 E-value=4.7e-09 Score=115.76 Aligned_cols=144 Identities=19% Similarity=0.259 Sum_probs=86.0
Q ss_pred ccccccceeeEEEEec-CCCEEEEEEecCCh--HHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 12 PLATASIAQVHRATLV-DGRQVVVKVQHQGI--KTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 12 plasaSigqV~~A~l~-~G~~VAVKv~~p~i--~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
-.|.|-|+.|.+|+.. -|+.|||||.|-+= .+.-..++++|+++... |-..-
T Consensus 439 ~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~A-------------------------D~Edk 493 (752)
T KOG0670|consen 439 YTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDA-------------------------DPEDK 493 (752)
T ss_pred ccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhcc-------------------------Cchhh
Confidence 3689999999999965 68999999987542 22223455655554221 11111
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcC----CCHHHHHHHHHHH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFG----VNKQKVVEEITRA 164 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~----~~~~~l~~~~~~~ 164 (864)
-..+.-|++ |.. ....+||.|-+ ...|.+++ .+.| +....+-...-++
T Consensus 494 ~Hclrl~r~-F~h------------------------knHLClVFE~L-slNLRevL--KKyG~nvGL~ikaVRsYaqQL 545 (752)
T KOG0670|consen 494 FHCLRLFRH-FKH------------------------KNHLCLVFEPL-SLNLREVL--KKYGRNVGLHIKAVRSYAQQL 545 (752)
T ss_pred hHHHHHHHH-hhh------------------------cceeEEEehhh-hchHHHHH--HHhCcccceeehHHHHHHHHH
Confidence 112223333 221 23346787765 24444443 3333 2222222222222
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHH
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 209 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 209 (864)
| |+.+-..||+|||+||.||||++. ...++|||||.+...++.+
T Consensus 546 flALklLK~c~vlHaDIKPDNiLVNE~-k~iLKLCDfGSA~~~~ene 591 (752)
T KOG0670|consen 546 FLALKLLKKCGVLHADIKPDNILVNES-KNILKLCDFGSASFASENE 591 (752)
T ss_pred HHHHHHHHhcCeeecccCccceEeccC-cceeeeccCcccccccccc
Confidence 2 555557899999999999999974 4678999999998887654
No 411
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=98.91 E-value=5.6e-09 Score=114.74 Aligned_cols=79 Identities=15% Similarity=0.166 Sum_probs=59.8
Q ss_pred cCCceEEEeecCCcCCCChHHHh-hcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLT 202 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~ 202 (864)
....+++|||++|.+|.++.... ..+.+...+...+.+++ +..+|..|++|+|+||+||+++.+ +.++|.|||.+
T Consensus 71 ~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~--~~~kl~d~~~~ 148 (314)
T cd08216 71 DSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGD--GKVVLSGLRYS 148 (314)
T ss_pred CCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecC--CceEEecCccc
Confidence 45578999999999998875432 12344444444444433 778899999999999999999865 89999999988
Q ss_pred cccC
Q 002927 203 KKLS 206 (864)
Q Consensus 203 ~~l~ 206 (864)
..+.
T Consensus 149 ~~~~ 152 (314)
T cd08216 149 VSMI 152 (314)
T ss_pred eeec
Confidence 7654
No 412
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=98.90 E-value=3.2e-09 Score=116.40 Aligned_cols=142 Identities=22% Similarity=0.191 Sum_probs=94.4
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+-+|+|.||.||+|.+ +++.|||||..+.-.+....+-+|.+. | ..+-.
T Consensus 216 eli~~Grfg~V~KaqL-~~~~VAVKifp~~~kqs~~~Ek~Iy~l---------p---------------------~m~h~ 264 (534)
T KOG3653|consen 216 ELIGRGRFGCVWKAQL-DNRLVAVKIFPEQEKQSFQNEKNIYSL---------P---------------------GMKHE 264 (534)
T ss_pred HHhhcCccceeehhhc-cCceeEEEecCHHHHHHHHhHHHHHhc---------c---------------------Cccch
Confidence 5689999999999998 569999999776555544444332111 1 11233
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHH---HHHHHHHHHHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQK---VVEEITRAYAH 167 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~---l~~~~~~~~l~ 167 (864)
|+.+|-..=+ ..+.. ..+..||+||-+-++|.+++. ..-++-.. +++.+++- +.
T Consensus 265 nIl~Fi~~ek------------------r~t~~--~~eywLVt~fh~kGsL~dyL~--~ntisw~~~cria~SmarG-La 321 (534)
T KOG3653|consen 265 NILQFIGAEK------------------RGTAD--RMEYWLVTEFHPKGSLCDYLK--ANTISWNSLCRIAESMARG-LA 321 (534)
T ss_pred hHHHhhchhc------------------cCCcc--ccceeEEeeeccCCcHHHHHH--hccccHHHHHHHHHHHHHH-HH
Confidence 4444422100 00000 125679999999999999854 44455444 44444443 55
Q ss_pred HHHh---------cCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 168 QIYV---------DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 168 ~i~~---------~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
.+|+ -.|.|||+|.-||||..| +.-+|.|||++.++++.
T Consensus 322 ~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~D--lTccIaDFGLAl~~~p~ 369 (534)
T KOG3653|consen 322 HLHEELPRGDHHKPPIAHRDLKSKNVLVKND--LTCCIADFGLALRLEPG 369 (534)
T ss_pred HhcccCCcCCCCCCccccccccccceEEccC--CcEEeeccceeEEecCC
Confidence 6664 579999999999999976 89999999999998754
No 413
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.86 E-value=1.3e-08 Score=105.65 Aligned_cols=145 Identities=21% Similarity=0.258 Sum_probs=90.2
Q ss_pred cccccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 9 VETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 9 d~~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
+-+|++.|..++||+.+..+|+.++||+.+++.... ...++.+|
T Consensus 2 ~~~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~------------------------------------~~~~~~~E 45 (223)
T cd05154 2 EVRQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLP------------------------------------SAHDVARE 45 (223)
T ss_pred cceecCCCccceEEEEEecCCcceEEEeCCCcccCc------------------------------------ccccHHHH
Confidence 448999999999999998777999999865432100 11235667
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--cC-----CceEEEeecCCcCCCChHH--------H----hh
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SS-----ETVLILEFMDGIRLNDCES--------L----EA 149 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~-----~~vLvmE~i~G~~L~~~~~--------~----~~ 149 (864)
++.++.+++. .+.+|+++. .. ..+++|||++|.++.+... . ..
T Consensus 46 ~~~~~~l~~~------------------~~~vp~~~~~~~~~~~~~~~~~v~e~i~G~~l~~~~~~~~~~~~~~~~i~~~ 107 (223)
T cd05154 46 YRVLRALAGT------------------GVPVPKVLALCEDPSVLGTPFYVMERVDGRVLRDRLLRPELSPEERRALARA 107 (223)
T ss_pred HHHHHHhhCC------------------CCCCCCEEEECCCCCccCCceEEEEEeCCEecCCCCCCCCCCHHHHHHHHHH
Confidence 7777776541 355787765 22 4589999999998876431 0 00
Q ss_pred --------cCCCH----------------HHHHH---HH----------HHHHHHHH-------HhcCeeccCCCCCCeE
Q 002927 150 --------FGVNK----------------QKVVE---EI----------TRAYAHQI-------YVDGFFNGDPHPGNFL 185 (864)
Q Consensus 150 --------~~~~~----------------~~l~~---~~----------~~~~l~~i-------~~~G~~H~D~hPgNIl 185 (864)
+..+. ..+.. .+ +...++.+ ....++|+|+||+||+
T Consensus 108 i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil 187 (223)
T cd05154 108 LADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVL 187 (223)
T ss_pred HHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEE
Confidence 00000 00000 00 00011111 1468999999999999
Q ss_pred EccCCCCceEEEecccccccCh
Q 002927 186 VSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 186 v~~~~~g~i~LiDFG~~~~l~~ 207 (864)
++.+.++.+.||||+.++.-++
T Consensus 188 ~~~~~~~~~~iID~e~~~~g~~ 209 (223)
T cd05154 188 FHPDEPRVVAVLDWELATLGDP 209 (223)
T ss_pred EcCCCCcEEEEEeccccccCCh
Confidence 9863135688999998886544
No 414
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=98.86 E-value=3.1e-09 Score=120.80 Aligned_cols=85 Identities=21% Similarity=0.249 Sum_probs=59.8
Q ss_pred eeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHH--HHHHHHhcCeeccCCCCCCeEEccCCCCceEEE
Q 002927 121 PEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA--YAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILL 197 (864)
Q Consensus 121 P~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~--~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~Li 197 (864)
-.++. ....++|||.+.|.-+-+...... ....+....+.++ .+..+|++|+||||+||+|||+.. ..|.|.|+
T Consensus 382 ~~v~~~~~~~~~v~e~l~g~ell~ri~~~~--~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~-~~g~lrlt 458 (612)
T KOG0603|consen 382 HDVYEDGKEIYLVMELLDGGELLRRIRSKP--EFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDG-SAGHLRLT 458 (612)
T ss_pred cceecCCceeeeeehhccccHHHHHHHhcc--hhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecC-CCCcEEEE
Confidence 34444 456789999999987766533222 1212232233332 388899999999999999999952 24899999
Q ss_pred ecccccccChH
Q 002927 198 DFGLTKKLSSS 208 (864)
Q Consensus 198 DFG~~~~l~~~ 208 (864)
|||..+.+.++
T Consensus 459 yFG~a~~~~~~ 469 (612)
T KOG0603|consen 459 YFGFWSELERS 469 (612)
T ss_pred EechhhhCchh
Confidence 99999998876
No 415
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=98.85 E-value=4.3e-09 Score=122.33 Aligned_cols=137 Identities=24% Similarity=0.319 Sum_probs=90.5
Q ss_pred cccccccccee-eEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 10 ETPLATASIAQ-VHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 10 ~~plasaSigq-V~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
++-+|.|+-|. ||+|.. +||+||||- ++.++.....+|++..+|
T Consensus 514 ~eilG~Gs~Gt~Vf~G~y-e~R~VAVKr----------------------------------ll~e~~~~A~rEi~lL~e 558 (903)
T KOG1027|consen 514 KEILGYGSNGTVVFRGVY-EGREVAVKR----------------------------------LLEEFFDFAQREIQLLQE 558 (903)
T ss_pred HHHcccCCCCcEEEEEee-CCceehHHH----------------------------------HhhHhHHHHHHHHHHHHh
Confidence 46677888876 599997 799999991 233444444455555544
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHh-----hcC-CCHHHHH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLE-----AFG-VNKQKVV 158 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~-----~~~-~~~~~l~ 158 (864)
.. .+-.|-+.|. ..-.|++.|.|. .+|+|+.... ..+ +++..+.
T Consensus 559 SD-------------------------~H~NviRyyc~E~d~qF~YIalELC~-~sL~dlie~~~~d~~~~~~i~~~~~l 612 (903)
T KOG1027|consen 559 SD-------------------------EHPNVIRYYCSEQDRQFLYIALELCA-CSLQDLIESSGLDVEMQSDIDPISVL 612 (903)
T ss_pred cc-------------------------CCCceEEEEeeccCCceEEEEehHhh-hhHHHHHhccccchhhcccccHHHHH
Confidence 31 1223334443 233689999995 6777765431 111 3344444
Q ss_pred HHHHHHHHHHHHhcCeeccCCCCCCeEEcc---CCCCceEEEecccccccChH
Q 002927 159 EEITRAYAHQIYVDGFFNGDPHPGNFLVSK---DPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 159 ~~~~~~~l~~i~~~G~~H~D~hPgNIlv~~---~~~g~i~LiDFG~~~~l~~~ 208 (864)
..++.. +.++|..+++|||+||.||||.. +...+++|.|||+++++...
T Consensus 613 ~q~~~G-laHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~ 664 (903)
T KOG1027|consen 613 SQIASG-LAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGG 664 (903)
T ss_pred HHHHHH-HHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCC
Confidence 444443 77899999999999999999985 32356889999999999764
No 416
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=98.84 E-value=3.5e-09 Score=112.81 Aligned_cols=77 Identities=17% Similarity=0.237 Sum_probs=57.1
Q ss_pred cCCceEEEeecCCcCCCChHHH---hhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecc
Q 002927 126 SSETVLILEFMDGIRLNDCESL---EAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFG 200 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~---~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG 200 (864)
....+++|||++|.+|.++... .....+...+...+.++. +..+|+.|++|+|++|.||+++. +.++|+|||
T Consensus 74 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~---~~~~l~d~g 150 (260)
T cd08222 74 RDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN---NLLKIGDFG 150 (260)
T ss_pred CCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec---CCEeecccC
Confidence 3456899999999999876532 112344554444444443 67899999999999999999974 579999999
Q ss_pred ccccc
Q 002927 201 LTKKL 205 (864)
Q Consensus 201 ~~~~l 205 (864)
.+..+
T Consensus 151 ~~~~~ 155 (260)
T cd08222 151 VSRLL 155 (260)
T ss_pred ceeec
Confidence 87665
No 417
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.83 E-value=4.4e-08 Score=104.94 Aligned_cols=100 Identities=12% Similarity=0.098 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE--e-------cCCceEEEeecCCc-CCCChHHHh-hcCCC
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI--Q-------SSETVLILEFMDGI-RLNDCESLE-AFGVN 153 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~--~-------~~~~vLvmE~i~G~-~L~~~~~~~-~~~~~ 153 (864)
+.+|.+++.++.+. ++.+|++. . ..+.+||||+++|. +|.++.... ....+
T Consensus 75 a~rE~~~l~~L~~~------------------GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~~~~~ 136 (268)
T PRK15123 75 ADREWRAIHRLHEV------------------GVDTMTGVAFGERGSNPATRTSFIITEDLAPTISLEDYCADWATNPPD 136 (268)
T ss_pred HHHHHHHHHHHHHc------------------CCCCCCeeEEEEecCCCccceeEEEEeeCCCCccHHHHHHhhcccCCC
Confidence 56789999999763 46677663 2 12478999999996 787774311 11122
Q ss_pred ---HHHHHHHHHHHHHHHHHhcCeeccCCCCCCeEEcc-----CCCCceEEEeccccc
Q 002927 154 ---KQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSK-----DPPHRPILLDFGLTK 203 (864)
Q Consensus 154 ---~~~l~~~~~~~~l~~i~~~G~~H~D~hPgNIlv~~-----~~~g~i~LiDFG~~~ 203 (864)
...+++.+.. ++.++|..|++|+|++|+|||++. +++.++.||||+.+.
T Consensus 137 ~~~~~~ll~~la~-~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~ 193 (268)
T PRK15123 137 PRLKRMLIKRVAT-MVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ 193 (268)
T ss_pred HHHHHHHHHHHHH-HHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence 1234444333 377899999999999999999984 224689999999884
No 418
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=98.82 E-value=2.8e-08 Score=106.67 Aligned_cols=186 Identities=16% Similarity=0.199 Sum_probs=126.8
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHh--hCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAW--AEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~--~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
-.|..|--+-||.|+-.+|+.+||||-+-.|.-.-.+|-- +-.-+++ .....++..++.-|++. |
T Consensus 150 GCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRY----V~GEfRFRhgyck~NPRKMVk~WAEK---------E 216 (520)
T KOG2270|consen 150 GCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRY----VSGEFRFRHGYCKHNPRKMVKTWAEK---------E 216 (520)
T ss_pred cccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhh----ccceeeeecccccCCcHHHHHHHHHH---------H
Confidence 3577888899999998899999999977555322222211 1100111 11335677788877764 9
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCH---HHHHHHHHHHH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNK---QKVVEEITRAY 165 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~---~~l~~~~~~~~ 165 (864)
.+|+.|++.. ++.+|+++.-..+||||+||.+.... ...+....+.+ ..+...+++.+
T Consensus 217 ~RNLkRl~~a------------------GIP~PePIlLk~hVLVM~FlGrdgw~-aPkLKd~~ls~~ka~~~Y~~~v~~M 277 (520)
T KOG2270|consen 217 MRNLKRLNNA------------------GIPCPEPILLKNHVLVMEFLGRDGWA-APKLKDASLSTSKARELYQQCVRIM 277 (520)
T ss_pred HHHHHHHHhc------------------CCCCCCceeeecceEeeeeccCCCCc-CcccccccCChHHHHHHHHHHHHHH
Confidence 9999999752 58889988888899999999542211 11122222332 33444444443
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHHHHHHHHHHHHHhCCHHHHHHHHHHcCCC
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLR 238 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~G~~ 238 (864)
-.+....++||+||.--|+|+- +|++++||-+.+...+......| +..|...+-..|.++|+.
T Consensus 278 R~lY~~c~LVHADLSEfN~Lyh---dG~lyiIDVSQSVE~DHP~aldF-------LRmDc~NVn~FF~r~gv~ 340 (520)
T KOG2270|consen 278 RRLYQKCRLVHADLSEFNLLYH---DGKLYIIDVSQSVEHDHPHALDF-------LRMDCNNVNDFFRRLGVA 340 (520)
T ss_pred HHHHHHhceeccchhhhhheEE---CCEEEEEEccccccCCChhHHHH-------HHHHHHHHHHHHHHcCCe
Confidence 3334578999999999999996 38999999999988877655444 456778888999999984
No 419
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.82 E-value=3e-09 Score=111.16 Aligned_cols=145 Identities=18% Similarity=0.185 Sum_probs=95.2
Q ss_pred ccccc-cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhc
Q 002927 6 MDFVE-TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 83 (864)
Q Consensus 6 ~~fd~-~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~El 83 (864)
++||- +.||.|.||.|-.++-+ +|+-+|+||++..+- +..|- +++
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKevi--iakdE-----VAH-------------------------- 214 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVI--IAKDE-----VAH-------------------------- 214 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhhe--eehHH-----hhh--------------------------
Confidence 45664 78999999999999977 899999998775432 11110 011
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeE-Ee-cCCceEEEeecCCcCCCChHHHh-hcCCCHHHHHHH
Q 002927 84 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEV-IQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEE 160 (864)
Q Consensus 84 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v-~~-~~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~l~~~ 160 (864)
-..|-+.+...+|.|-. --+. +. ..+.+.||||..|+.|.-.+..+ -...++.++.-.
T Consensus 215 -TlTE~RVL~~~~HPFLt------------------~LKYsFQt~drlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGa 275 (516)
T KOG0690|consen 215 -TLTENRVLQNCRHPFLT------------------SLKYSFQTQDRLCFVMEYANGGELFFHLSRERVFSEDRTRFYGA 275 (516)
T ss_pred -hhhHHHHHHhccCcHHH------------------HhhhhhccCceEEEEEEEccCceEeeehhhhhcccchhhhhhhH
Confidence 11244455544443210 0000 01 34457999999999887543321 122234444443
Q ss_pred HHHHHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 161 ITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 161 ~~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
-+-..+..+|..+|+.||+|-+|+|++.| |.|+|.|||++++
T Consensus 276 EIvsAL~YLHs~~ivYRDlKLENLlLDkD--GHIKitDFGLCKE 317 (516)
T KOG0690|consen 276 EIVSALGYLHSRNIVYRDLKLENLLLDKD--GHIKITDFGLCKE 317 (516)
T ss_pred HHHHHhhhhhhCCeeeeechhhhheeccC--CceEeeecccchh
Confidence 34445889999999999999999999976 9999999999974
No 420
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=98.82 E-value=1.3e-08 Score=110.02 Aligned_cols=148 Identities=19% Similarity=0.247 Sum_probs=88.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
.-||.|+|+.||+|-.- ..+-|||||-.-+-. .+ +| .--+|...|
T Consensus 469 hLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~------Wr----------------------dE------KKeNYhKHA 514 (775)
T KOG1151|consen 469 HLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKN------WR----------------------DE------KKENYHKHA 514 (775)
T ss_pred HHhccccHHHHHHhcccchhheeeEeeehhccc------hh----------------------hH------hhhhHHHHH
Confidence 34899999999999954 678999998542211 10 00 001122222
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 164 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~ 164 (864)
-.-.++...+ + +..|-+.|. +...+-|+|||+|-+|+-+++..+ -...++.-..+.++
T Consensus 515 cREyrIHKeL--------------D--HpRIVKlYDyfslDtdsFCTVLEYceGNDLDFYLKQhk-lmSEKEARSIiMQi 577 (775)
T KOG1151|consen 515 CREYRIHKEL--------------D--HPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHK-LMSEKEARSIIMQI 577 (775)
T ss_pred HHHHhhhhcc--------------C--cceeeeeeeeeeeccccceeeeeecCCCchhHHHHhhh-hhhHHHHHHHHHHH
Confidence 2222222221 1 234445553 456789999999999987654222 12222222222222
Q ss_pred H--HHHHH--hcCeeccCCCCCCeEEccC-CCCceEEEecccccccChHH
Q 002927 165 Y--AHQIY--VDGFFNGDPHPGNFLVSKD-PPHRPILLDFGLTKKLSSSM 209 (864)
Q Consensus 165 ~--l~~i~--~~G~~H~D~hPgNIlv~~~-~~g~i~LiDFG~~~~l~~~~ 209 (864)
+ +..+- .--|||-||||||||+-.. ..|.|+|.|||+++.++++.
T Consensus 578 VnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddS 627 (775)
T KOG1151|consen 578 VNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDS 627 (775)
T ss_pred HHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhhccCCc
Confidence 2 33433 4679999999999998532 23789999999999877653
No 421
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.80 E-value=3.6e-09 Score=113.55 Aligned_cols=143 Identities=13% Similarity=0.116 Sum_probs=84.9
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
..||.||||.|-.|..+ +.+.+||||++.++--+ ..|++.--.-.+.+.. +. ..
T Consensus 355 ~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQ-dDDvectm~EKrvLAL--~~-kp--------------------- 409 (683)
T KOG0696|consen 355 MVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQ-DDDVECTMVEKRVLAL--PG-KP--------------------- 409 (683)
T ss_pred EEeccCccceeeeecccCcchhhhhhhhccceeee-cCcccceehhhhheec--CC-CC---------------------
Confidence 67999999999999977 67889999988765321 1122110000000000 00 00
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHH-HhhcCCCHHHHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCES-LEAFGVNKQKVVEEITRAYAHQ 168 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~-~~~~~~~~~~l~~~~~~~~l~~ 168 (864)
--+..+...|+. -.+.+.||||+.|+.|--... ..+.......+...-+.+-+-.
T Consensus 410 pFL~qlHScFQT------------------------mDRLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFF 465 (683)
T KOG0696|consen 410 PFLVQLHSCFQT------------------------MDRLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFF 465 (683)
T ss_pred chHHHHHHHhhh------------------------hhheeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhh
Confidence 011122222220 134579999999998864432 1111111112222222233567
Q ss_pred HHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 169 IYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 169 i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
+|..||+.||||-.|||++.+ |.|+|.||||+++
T Consensus 466 Lh~kgIiYRDLKLDNvmLd~e--GHiKi~DFGmcKE 499 (683)
T KOG0696|consen 466 LHSKGIIYRDLKLDNVMLDSE--GHIKIADFGMCKE 499 (683)
T ss_pred hhcCCeeeeeccccceEeccC--CceEeeecccccc
Confidence 899999999999999999976 9999999999874
No 422
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.80 E-value=1.2e-08 Score=115.81 Aligned_cols=141 Identities=14% Similarity=0.077 Sum_probs=93.7
Q ss_pred ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 10 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
.-.+|.|.+|.||.|+.. +...+|||-.. +.- .++..-+++|+.+...
T Consensus 580 rvVLGKGTYG~VYA~RD~~tqvrIaIKEIp----ekd---------------------------sr~~QPLhEEIaLH~~ 628 (1226)
T KOG4279|consen 580 RVVLGKGTYGTVYAARDMDTQVRIAIKEIP----EKD---------------------------SREVQPLHEEIALHST 628 (1226)
T ss_pred eEEeecCceeEEEeeccccceeEEEeeecc----ccc---------------------------chhhccHHHHHHHHHH
Confidence 358999999999999976 56678999422 111 1222334566666655
Q ss_pred HH--HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCC--CHHHHHHHHHHH
Q 002927 89 AE--NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGV--NKQKVVEEITRA 164 (864)
Q Consensus 89 a~--n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~--~~~~l~~~~~~~ 164 (864)
.+ |+.++-..+.. .+-.-+-||-++|++|+++++..=..+ +...+.-..-++
T Consensus 629 LrHkNIVrYLGs~se------------------------nGf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQI 684 (1226)
T KOG4279|consen 629 LRHKNIVRYLGSVSE------------------------NGFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQI 684 (1226)
T ss_pred HhhHhHHHHhhccCC------------------------CCeEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHH
Confidence 54 45554443221 111237899999999999865332222 233333333333
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+ ++.+|+..|||||+|-.|+||+.- .|-++|.|||-++++.
T Consensus 685 LeGLkYLHen~IVHRDIKGDNVLvNTy-SGvlKISDFGTsKRLA 727 (1226)
T KOG4279|consen 685 LEGLKYLHENKIVHRDIKGDNVLVNTY-SGVLKISDFGTSKRLA 727 (1226)
T ss_pred HHHhhhhhhcceeeccccCCcEEEeec-cceEEecccccchhhc
Confidence 3 788899999999999999999864 4889999999988764
No 423
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=98.79 E-value=3.5e-09 Score=109.89 Aligned_cols=140 Identities=18% Similarity=0.178 Sum_probs=93.3
Q ss_pred ccccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHH
Q 002927 8 FVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 86 (864)
Q Consensus 8 fd~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 86 (864)
+..+.||.|--|.|-.+..+ +|+..|+||++-.-+.+ +|+++.
T Consensus 65 is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~KAR------------------------------------rEVeLH 108 (400)
T KOG0604|consen 65 ISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSPKAR------------------------------------REVELH 108 (400)
T ss_pred ehhhhhccccCCceEEEEeccchhhhHHHHHhcCHHHH------------------------------------hHhhhh
Confidence 34578999999999999876 89999999865332221 111111
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCC-CEEEeeEEe---cC--CceEEEeecCCcCCCChHHHhhc-CCCHHHHHH
Q 002927 87 SEAENTRIVSANLGCKNKHEDSNKKPAYEV-DVLIPEVIQ---SS--ETVLILEFMDGIRLNDCESLEAF-GVNKQKVVE 159 (864)
Q Consensus 87 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~-~v~vP~v~~---~~--~~vLvmE~i~G~~L~~~~~~~~~-~~~~~~l~~ 159 (864)
- +.. .++ .|.|-.||. .. ...+|||.++|+.|......+.. .+..++.++
T Consensus 109 w------~~s-----------------~h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~e 165 (400)
T KOG0604|consen 109 W------MAS-----------------GHPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASE 165 (400)
T ss_pred h------hhc-----------------CCCceEEeehhhhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHH
Confidence 0 000 111 355666665 22 23579999999999776543322 244555555
Q ss_pred HHHHHH--HHHHHhcCeeccCCCCCCeEEccC-CCCceEEEecccccccC
Q 002927 160 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKD-PPHRPILLDFGLTKKLS 206 (864)
Q Consensus 160 ~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~-~~g~i~LiDFG~~~~l~ 206 (864)
.+-++. +..+|..+|-|||+||+|+|.... ++..++|.|||++++-.
T Consensus 166 I~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~ 215 (400)
T KOG0604|consen 166 IMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQ 215 (400)
T ss_pred HHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccccccC
Confidence 444433 788999999999999999999743 34568999999998754
No 424
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=98.78 E-value=1.9e-08 Score=105.14 Aligned_cols=138 Identities=16% Similarity=0.198 Sum_probs=87.6
Q ss_pred ccccccccceeeEEEE-ecCCCEEEEEEec--CCh-HHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 10 ETPLATASIAQVHRAT-LVDGRQVVVKVQH--QGI-KTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 10 ~~plasaSigqV~~A~-l~~G~~VAVKv~~--p~i-~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
.+-||+|.+|.|-.++ +.+|.++||||.. |+- +.++-++.+++..-
T Consensus 83 ~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~C------------------------------ 132 (463)
T KOG0607|consen 83 SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQC------------------------------ 132 (463)
T ss_pred HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHh------------------------------
Confidence 4789999999999998 4599999999853 332 22222222111100
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH--H
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT--R 163 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~--~ 163 (864)
.--+|+-.+-+.|++ .++.|||||-+.|++|-.... ++.-+...+..+.+- .
T Consensus 133 -qgh~nilqLiefFEd------------------------d~~FYLVfEKm~GGplLshI~-~~~~F~E~EAs~vvkdia 186 (463)
T KOG0607|consen 133 -QGHKNILQLIEFFED------------------------DTRFYLVFEKMRGGPLLSHIQ-KRKHFNEREASRVVKDIA 186 (463)
T ss_pred -cCCccHHHHHHHhcc------------------------cceEEEEEecccCchHHHHHH-HhhhccHHHHHHHHHHHH
Confidence 001233333333321 566789999999999876543 223344444333332 2
Q ss_pred HHHHHHHhcCeeccCCCCCCeEEccCCC--CceEEEecccccc
Q 002927 164 AYAHQIYVDGFFNGDPHPGNFLVSKDPP--HRPILLDFGLTKK 204 (864)
Q Consensus 164 ~~l~~i~~~G~~H~D~hPgNIlv~~~~~--g~i~LiDFG~~~~ 204 (864)
..+..+|..||-|||+||+|||-... + .-++|+||-+...
T Consensus 187 ~aLdFlH~kgIAHRDlKPENiLC~~p-n~vsPvKiCDfDLgSg 228 (463)
T KOG0607|consen 187 SALDFLHTKGIAHRDLKPENILCESP-NKVSPVKICDFDLGSG 228 (463)
T ss_pred HHHHHHhhcCcccccCCccceeecCC-CCcCceeeeccccccc
Confidence 34889999999999999999998642 2 3488999977543
No 425
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=98.78 E-value=1.2e-08 Score=111.25 Aligned_cols=145 Identities=17% Similarity=0.167 Sum_probs=104.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|+||.|+-.+.+ +|+.+|.|-+ |-+.+++ -..|.--.+|.
T Consensus 191 RvlGkGGFGEV~acqvraTGKMYAcKkL----------~KKRiKk------------------------r~ge~maLnEk 236 (591)
T KOG0986|consen 191 RVLGKGGFGEVCACQVRATGKMYACKKL----------DKKRIKK------------------------RKGETMALNEK 236 (591)
T ss_pred EEEecccccceeEEEEecchhhHHHHHH----------HHHHHHH------------------------hhhhHHhhHHH
Confidence 78999999999999976 8999999832 1111110 01122234566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---cCCceEEEeecCCcCCCChHH-HhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCES-LEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLvmE~i~G~~L~~~~~-~~~~~~~~~~l~~~~~~~~ 165 (864)
..++++.. .+.|---|. ....+|||..+.|++|.-.+. ....+++.++..-..++++
T Consensus 237 ~iL~kV~s-------------------~FiVslaYAfeTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~ 297 (591)
T KOG0986|consen 237 QILEKVSS-------------------PFIVSLAYAFETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEII 297 (591)
T ss_pred HHHHHhcc-------------------CcEEEEeeeecCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHH
Confidence 67766543 234444443 456789999999999875432 2345788777766666655
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHH
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMK 210 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r 210 (864)
++.+|+.+||.||+||.|||+++. |.+.|.|.|++..+++..+
T Consensus 298 cGLehlH~~~iVYRDLKPeNILLDd~--GhvRISDLGLAvei~~g~~ 342 (591)
T KOG0986|consen 298 CGLEHLHRRRIVYRDLKPENILLDDH--GHVRISDLGLAVEIPEGKP 342 (591)
T ss_pred hhHHHHHhcceeeccCChhheeeccC--CCeEeeccceEEecCCCCc
Confidence 899999999999999999999976 9999999999999987654
No 426
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=98.77 E-value=1.5e-08 Score=113.32 Aligned_cols=153 Identities=20% Similarity=0.272 Sum_probs=88.7
Q ss_pred ccccc-ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhh
Q 002927 5 FMDFV-ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKE 82 (864)
Q Consensus 5 F~~fd-~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~E 82 (864)
|++|- -.|+|+|.||||..|+.+ +..+|+||.... +++.-|- |++ .+++. .+- .
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~K---eRIL~Dt--------Wvr--DrkLG--tVp--------~- 615 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFK---ERILVDT--------WVR--DRKLG--TVP--------S- 615 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhh---hhhhhhh--------hhc--ccccC--ccc--------h-
Confidence 33443 379999999999999987 678999997542 2332222 111 01111 111 1
Q ss_pred ccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCC-CEEEeeEEe-cCCceEEEeec-CCcCCCChHHHhhcCCCHH--HH
Q 002927 83 LDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEV-DVLIPEVIQ-SSETVLILEFM-DGIRLNDCESLEAFGVNKQ--KV 157 (864)
Q Consensus 83 ld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~-~v~vP~v~~-~~~~vLvmE~i-~G~~L~~~~~~~~~~~~~~--~l 157 (864)
|..-+.++..+ .++ .+.+-.+++ ....+|+||-- +|+.|.|+.... ...+.. ++
T Consensus 616 -----EIqIla~l~~~---------------sH~NIlKlLdfFEddd~yyl~te~hg~gIDLFd~IE~k-p~m~E~eAk~ 674 (772)
T KOG1152|consen 616 -----EIQILATLNKH---------------SHENILKLLDFFEDDDYYYLETEVHGEGIDLFDFIEFK-PRMDEPEAKL 674 (772)
T ss_pred -----hHHHHHHhhhc---------------CccchhhhhheeecCCeeEEEecCCCCCcchhhhhhcc-CccchHHHHH
Confidence 22222332211 000 111222222 34467888853 566777765432 223322 22
Q ss_pred HHHHHHHHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 158 VEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 158 ~~~~~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
+-..+.+-.+.+|..||+|||+|-+|+.|+.. |.++|||||.+..
T Consensus 675 IFkQV~agi~hlh~~~ivhrdikdenvivd~~--g~~klidfgsaa~ 719 (772)
T KOG1152|consen 675 IFKQVVAGIKHLHDQGIVHRDIKDENVIVDSN--GFVKLIDFGSAAY 719 (772)
T ss_pred HHHHHHhccccccccCceecccccccEEEecC--CeEEEeeccchhh
Confidence 22233334778899999999999999999854 9999999998654
No 427
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=98.73 E-value=1.9e-08 Score=105.01 Aligned_cols=79 Identities=19% Similarity=0.278 Sum_probs=51.9
Q ss_pred CceEEEeecCCcCCCChHHHh----hcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCC--CCceEEEec
Q 002927 128 ETVLILEFMDGIRLNDCESLE----AFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDP--PHRPILLDF 199 (864)
Q Consensus 128 ~~vLvmE~i~G~~L~~~~~~~----~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~--~g~i~LiDF 199 (864)
...|+.||.+- +|..+.... ...+.+..+-..+.+++ +..+|+.-++||||||.||||..++ .|+++|.||
T Consensus 102 ~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDl 180 (438)
T KOG0666|consen 102 KVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADL 180 (438)
T ss_pred eEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecc
Confidence 34699999982 222222211 12233333333444444 6777999999999999999998542 389999999
Q ss_pred ccccccCh
Q 002927 200 GLTKKLSS 207 (864)
Q Consensus 200 G~~~~l~~ 207 (864)
|+++.+..
T Consensus 181 GlaR~~~~ 188 (438)
T KOG0666|consen 181 GLARLFNN 188 (438)
T ss_pred cHHHHhhc
Confidence 99876644
No 428
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.72 E-value=4.3e-09 Score=119.34 Aligned_cols=140 Identities=14% Similarity=0.184 Sum_probs=95.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
.-+|||++|-||||+.+ +|+.+|||+.+-.-.+. +. . +.+|+-..+|.
T Consensus 21 qrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd----~~-------------------~--------iqqei~~~~dc 69 (829)
T KOG0576|consen 21 QRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDD----FS-------------------G--------IQQEIGMLRDC 69 (829)
T ss_pred eeecCCcccchhhhcccccCchhhheeeeccCCcc----cc-------------------c--------cccceeeeecC
Confidence 46999999999999986 89999999875222111 11 1 11222222332
Q ss_pred H--HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 E--NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~--n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
+ |+-.+-..+- +..+-.++||||.|++|.|..... ..+...+++...-+..
T Consensus 70 ~h~nivay~gsyl------------------------r~dklwicMEycgggslQdiy~~T-gplselqiayvcRetl~g 124 (829)
T KOG0576|consen 70 RHPNIVAYFGSYL------------------------RRDKLWICMEYCGGGSLQDIYHVT-GPLSELQIAYVCRETLQG 124 (829)
T ss_pred CCcChHHHHhhhh------------------------hhcCcEEEEEecCCCcccceeeec-ccchhHHHHHHHhhhhcc
Confidence 2 1111111110 134567999999999999975432 2344555655555544
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
++.+|..|=+|||+|-+||++++. |.+++.|||.++.++..
T Consensus 125 l~ylhs~gk~hRdiKGanilltd~--gDvklaDfgvsaqitat 165 (829)
T KOG0576|consen 125 LKYLHSQGKIHRDIKGANILLTDE--GDVKLADFGVSAQITAT 165 (829)
T ss_pred chhhhcCCcccccccccceeeccc--CceeecccCchhhhhhh
Confidence 888999999999999999999976 89999999999888654
No 429
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=98.72 E-value=1.1e-09 Score=110.53 Aligned_cols=140 Identities=19% Similarity=0.241 Sum_probs=85.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|+.|.|+.|||.... +|+..|+|+..-..-. . -++. ++.+|+
T Consensus 17 e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~--~-------------------~~~e--------------~l~rEa 61 (355)
T KOG0033|consen 17 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS--A-------------------RDFQ--------------KLEREA 61 (355)
T ss_pred HHHccCchHHHHHHHhccchHHHHHHHhhhhhhc--c-------------------ccHH--------------HHHHHH
Confidence 46999999999999865 8999999964211000 0 0111 133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHH---HHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQK---VVEEIT 162 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~---l~~~~~ 162 (864)
+--+.+++ .+|-++.. .+-++||.|+++|..|-.-.. .+.-+.... ..++++
T Consensus 62 rIC~~LqH--------------------P~IvrL~~ti~~~~~~ylvFe~m~G~dl~~eIV-~R~~ySEa~aSH~~rQiL 120 (355)
T KOG0033|consen 62 RICRKLQH--------------------PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV-AREFYSEADASHCIQQIL 120 (355)
T ss_pred HHHHhcCC--------------------CcEeehhhhhcccceeEEEEecccchHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 44333322 22333332 355889999999988753221 111111111 222222
Q ss_pred HHHHHHHHhcCeeccCCCCCCeEEccCCC-CceEEEecccccccCh
Q 002927 163 RAYAHQIYVDGFFNGDPHPGNFLVSKDPP-HRPILLDFGLTKKLSS 207 (864)
Q Consensus 163 ~~~l~~i~~~G~~H~D~hPgNIlv~~~~~-g~i~LiDFG~~~~l~~ 207 (864)
++ +...|..||+|||+||.|+++....+ .-++|.|||++..+.+
T Consensus 121 ea-l~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~ 165 (355)
T KOG0033|consen 121 EA-LAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVND 165 (355)
T ss_pred HH-HHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCC
Confidence 22 56678999999999999999975433 3589999999999873
No 430
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=98.70 E-value=4.1e-08 Score=99.80 Aligned_cols=78 Identities=19% Similarity=0.227 Sum_probs=61.5
Q ss_pred CCceEEEeecCCcCCCChHHHhh-c--CCCHHHHHHHHHHHH--HHHHHhcC--eeccCCCCCCeEEccCCCCceEEEec
Q 002927 127 SETVLILEFMDGIRLNDCESLEA-F--GVNKQKVVEEITRAY--AHQIYVDG--FFNGDPHPGNFLVSKDPPHRPILLDF 199 (864)
Q Consensus 127 ~~~vLvmE~i~G~~L~~~~~~~~-~--~~~~~~l~~~~~~~~--l~~i~~~G--~~H~D~hPgNIlv~~~~~g~i~LiDF 199 (864)
...+|+..|..-++|.|...... . -++..+++..+...+ ++++|+.. +.|+|+||+||++.++ +.++|.||
T Consensus 96 ~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~--~~~vl~D~ 173 (302)
T KOG2345|consen 96 HEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDS--GLPVLMDL 173 (302)
T ss_pred eeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCC--CceEEEec
Confidence 44678999887777777654322 2 356777877777666 99999999 9999999999999864 89999999
Q ss_pred ccccccC
Q 002927 200 GLTKKLS 206 (864)
Q Consensus 200 G~~~~l~ 206 (864)
|.+...+
T Consensus 174 GS~~~a~ 180 (302)
T KOG2345|consen 174 GSATQAP 180 (302)
T ss_pred cCccccc
Confidence 9987654
No 431
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.68 E-value=1.6e-08 Score=105.90 Aligned_cols=147 Identities=18% Similarity=0.165 Sum_probs=91.3
Q ss_pred ccccc-cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhc
Q 002927 6 MDFVE-TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 83 (864)
Q Consensus 6 ~~fd~-~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~El 83 (864)
.+|+. +.||.||++.|-.++++ +.+.+|+||.+...- .|- -+++++-.
T Consensus 250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~----ndd----------------edidwvqt---------- 299 (593)
T KOG0695|consen 250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELV----NDD----------------EDIDWVQT---------- 299 (593)
T ss_pred ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhc----CCc----------------ccchhHHh----------
Confidence 45664 78999999999999986 788999998653221 111 11111111
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHH
Q 002927 84 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEI 161 (864)
Q Consensus 84 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~ 161 (864)
|-...+. +.| ...-|-+..-+. .++.+.|.||++|+.|--.....+ ....-.++...-
T Consensus 300 ----ek~vfe~-asn---------------~pflvglhscfqtesrlffvieyv~ggdlmfhmqrqrklpeeharfys~e 359 (593)
T KOG0695|consen 300 ----EKHVFEQ-ASN---------------NPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAE 359 (593)
T ss_pred ----hHHHHHh-ccC---------------CCeEEehhhhhcccceEEEEEEEecCcceeeehhhhhcCcHHHhhhhhHH
Confidence 1111111 111 011111222222 466789999999998865443221 111122333333
Q ss_pred HHHHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 162 TRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 162 ~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
+.+.+..+|+.||+.||+|-.|+|++.+ |.|+|.|+||+++
T Consensus 360 i~lal~flh~rgiiyrdlkldnvlldae--ghikltdygmcke 400 (593)
T KOG0695|consen 360 ICLALNFLHERGIIYRDLKLDNVLLDAE--GHIKLTDYGMCKE 400 (593)
T ss_pred HHHHHHHHhhcCeeeeeccccceEEccC--Cceeecccchhhc
Confidence 4455888999999999999999999976 9999999999875
No 432
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.67 E-value=4.6e-08 Score=101.12 Aligned_cols=103 Identities=21% Similarity=0.291 Sum_probs=73.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--c------CCceEEEeecCCc-CCCChHHHhh--cCCC
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--S------SETVLILEFMDGI-RLNDCESLEA--FGVN 153 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~------~~~vLvmE~i~G~-~L~~~~~~~~--~~~~ 153 (864)
..+|.+++.++++. ++.+|+++. . .+.+|+||+++|. +|.++..... ....
T Consensus 58 a~~E~~~~~~L~~~------------------Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~ 119 (206)
T PF06293_consen 58 AKREWRNLQRLREA------------------GIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQ 119 (206)
T ss_pred HHHHHHHHHHHHHc------------------CCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhh
Confidence 56788999998762 577888864 1 2348999999994 6777654211 1112
Q ss_pred HHHHHHHHHHHHHHHHHhcCeeccCCCCCCeEEccCC-CCceEEEecccccccC
Q 002927 154 KQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKKLS 206 (864)
Q Consensus 154 ~~~l~~~~~~~~l~~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~l~ 206 (864)
...+++.+.+. +..+|..||+|+|++|+||||+.++ +.++.||||+-+..-.
T Consensus 120 ~~~ll~~l~~~-i~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~ 172 (206)
T PF06293_consen 120 RRELLRALARL-IAKLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRP 172 (206)
T ss_pred HHHHHHHHHHH-HHHHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeCC
Confidence 34555555544 7789999999999999999999752 2379999999877654
No 433
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.67 E-value=7.8e-08 Score=104.98 Aligned_cols=143 Identities=15% Similarity=0.151 Sum_probs=95.9
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+-||.|-||.|+||++ .|+.|||||-.-.-+..-.++-+|...++ +++|
T Consensus 217 e~IGkGRyGEVwrG~w-rGe~VAVKiF~srdE~SWfrEtEIYqTvm----------------------------LRHE-- 265 (513)
T KOG2052|consen 217 EIIGKGRFGEVWRGRW-RGEDVAVKIFSSRDERSWFRETEIYQTVM----------------------------LRHE-- 265 (513)
T ss_pred EEecCccccceeeccc-cCCceEEEEecccchhhhhhHHHHHHHHH----------------------------hccc--
Confidence 5699999999999998 59999999865433333323322222111 1111
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQ 168 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~ 168 (864)
|+-.|-.. + .+ +. ...|+.+||.+|-+-++|.|++. +..++.+...+....+. +..
T Consensus 266 NILgFIaa--D---~~-------~~--------gs~TQLwLvTdYHe~GSL~DyL~--r~tv~~~~ml~LalS~AsGLaH 323 (513)
T KOG2052|consen 266 NILGFIAA--D---NK-------DN--------GSWTQLWLVTDYHEHGSLYDYLN--RNTVTTEGMLKLALSIASGLAH 323 (513)
T ss_pred hhhhhhhc--c---cc-------CC--------CceEEEEEeeecccCCcHHHHHh--hccCCHHHHHHHHHHHhhhHHH
Confidence 33333110 0 00 00 01467789999999999999854 46677777766665544 666
Q ss_pred HH--------hcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 169 IY--------VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 169 i~--------~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+| .-.|-|||+|.-||||..+ |.-+|.|+|++.+.+..
T Consensus 324 LH~eI~GTqgKPaIAHRDlKSKNILVKkn--~~C~IADLGLAv~h~~~ 369 (513)
T KOG2052|consen 324 LHMEIVGTQGKPAIAHRDLKSKNILVKKN--GTCCIADLGLAVRHDSD 369 (513)
T ss_pred HHHHHhcCCCCchhhccccccccEEEccC--CcEEEeeceeeEEeccc
Confidence 66 3479999999999999865 89999999999876653
No 434
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.64 E-value=2.6e-08 Score=116.83 Aligned_cols=139 Identities=21% Similarity=0.261 Sum_probs=100.8
Q ss_pred cccccccceeeEEEEec------CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 11 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 11 ~plasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
+-||.|.||.||+|+.. +-..||||.++.....+ ...|
T Consensus 492 ~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~------------------------------------~~~d 535 (774)
T KOG1026|consen 492 EELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQ------------------------------------ARQD 535 (774)
T ss_pred hhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHH------------------------------------HHHH
Confidence 56999999999999964 23579999766544333 2346
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhc-------C--
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAF-------G-- 151 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~-------~-- 151 (864)
|++||.-+..|.| + .|-+++. ....+||.||++-++|.+++..... +
T Consensus 536 F~REaeLla~l~H------------------~--nIVrLlGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~ 595 (774)
T KOG1026|consen 536 FRREAELLAELQH------------------P--NIVRLLGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQD 595 (774)
T ss_pred HHHHHHHHHhccC------------------C--CeEEEEEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCC
Confidence 7888887777644 2 2334443 4568999999999999998664321 1
Q ss_pred ----CCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 152 ----VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 152 ----~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+...+++....++. +.+|-++.||||||---|.||.+. ..++|.||||++.+-.
T Consensus 596 ~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~--l~VKIsDfGLsRdiYs 655 (774)
T KOG1026|consen 596 TPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGEN--LVVKISDFGLSRDIYS 655 (774)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccc--eEEEecccccchhhhh
Confidence 33445555555544 667779999999999999999865 7899999999987543
No 435
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=98.61 E-value=1.6e-07 Score=96.53 Aligned_cols=78 Identities=26% Similarity=0.343 Sum_probs=56.8
Q ss_pred CCceEEEeecCCcCCCChHHHhhcCCCH---HHHHHHHHHHHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 127 SETVLILEFMDGIRLNDCESLEAFGVNK---QKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 127 ~~~vLvmE~i~G~~L~~~~~~~~~~~~~---~~l~~~~~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
.-.|.+|||++=++|..- ....|+-. +++.+.+.. .+..+|..++||||||.+||||-+...-+++|+|||...
T Consensus 95 d~YvF~qE~aP~gdL~sn--v~~~GigE~~~K~v~~ql~S-Ai~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~ 171 (378)
T KOG1345|consen 95 DAYVFVQEFAPRGDLRSN--VEAAGIGEANTKKVFAQLLS-AIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTR 171 (378)
T ss_pred ceEEEeeccCccchhhhh--cCcccccHHHHHHHHHHHHH-HHHHhhccchhhcccccceEEEecCCccEEEeeeccccc
Confidence 345899999998887754 23344432 344444443 477889999999999999999965434689999999987
Q ss_pred ccCh
Q 002927 204 KLSS 207 (864)
Q Consensus 204 ~l~~ 207 (864)
....
T Consensus 172 k~g~ 175 (378)
T KOG1345|consen 172 KVGT 175 (378)
T ss_pred ccCc
Confidence 6543
No 436
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=98.59 E-value=7.8e-08 Score=108.26 Aligned_cols=140 Identities=19% Similarity=0.198 Sum_probs=100.6
Q ss_pred cccccccceeeEEEEecC---CC--EEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 11 TPLATASIAQVHRATLVD---GR--QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~---G~--~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
+-||.|-||-||.|+..+ |+ .||||+=+.+..- +. . | .|
T Consensus 395 r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~-------------------------d~-----t-----e-kf 438 (974)
T KOG4257|consen 395 RLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTP-------------------------DD-----T-----E-KF 438 (974)
T ss_pred HhhcCCcccceeeeEecccccCcceeeeeehhccCCCh-------------------------hh-----H-----H-HH
Confidence 569999999999999643 44 4788864432211 00 0 0 26
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 162 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~ 162 (864)
..||--++.|.| .+|-+++. ....+||||.++=+.|..++..++..++...+.....
T Consensus 439 lqEa~iMrnfdH--------------------phIikLIGv~~e~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~ 498 (974)
T KOG4257|consen 439 LQEASIMRNFDH--------------------PHIIKLIGVCVEQPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCY 498 (974)
T ss_pred HHHHHHHHhCCC--------------------cchhheeeeeeccceeEEEecccchhHHHHHHhccccchHHHHHHHHH
Confidence 667766665533 23444443 3457899999998899888776666666666666555
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
++. +..++...|+|||+-..||||... ..++|.|||+++-++++
T Consensus 499 Qi~talaYLeSkrfVHRDIAaRNiLVsSp--~CVKLaDFGLSR~~ed~ 544 (974)
T KOG4257|consen 499 QICTALAYLESKRFVHRDIAARNILVSSP--QCVKLADFGLSRYLEDD 544 (974)
T ss_pred HHHHHHHHHHhhchhhhhhhhhheeecCc--ceeeecccchhhhcccc
Confidence 554 778899999999999999999864 68999999999988764
No 437
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=98.59 E-value=2.9e-08 Score=114.81 Aligned_cols=84 Identities=20% Similarity=0.162 Sum_probs=71.9
Q ss_pred CCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 127 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 127 ~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
+..-||++|++++.|.|..+..+..+-.+.++....++. ++.|++++++||||-..|+||..- ..+++.|||+++-
T Consensus 770 s~~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP--~hvkitdfgla~l 847 (1177)
T KOG1025|consen 770 STLQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSP--NHVKITDFGLAKL 847 (1177)
T ss_pred chHHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCC--CeEEEEecchhhc
Confidence 445689999999999999888877788888888887776 888999999999999999999853 6899999999998
Q ss_pred cChHHHHH
Q 002927 205 LSSSMKQA 212 (864)
Q Consensus 205 l~~~~r~~ 212 (864)
+.++..+.
T Consensus 848 l~~d~~ey 855 (1177)
T KOG1025|consen 848 LAPDEKEY 855 (1177)
T ss_pred cCcccccc
Confidence 87765543
No 438
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=98.54 E-value=2.4e-07 Score=117.94 Aligned_cols=125 Identities=15% Similarity=0.192 Sum_probs=79.1
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|.||+|+.+ +|+.||||..+..... ...|.
T Consensus 696 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-----------------------------------------~~~~~ 734 (968)
T PLN00113 696 NVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI-----------------------------------------PSSEI 734 (968)
T ss_pred cEEccCCCeeEEEEEECCCCcEEEEEEccCCccc-----------------------------------------cHHHH
Confidence 57999999999999975 8999999975421100 00122
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+.+++ ++ .|.+++. ....+|||||++|++|.++.. . .+.......+.++.
T Consensus 735 ~~l~~l~------------------Hp--nIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~--~--l~~~~~~~i~~~ia 790 (968)
T PLN00113 735 ADMGKLQ------------------HP--NIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLR--N--LSWERRRKIAIGIA 790 (968)
T ss_pred HHHhhCC------------------CC--CcceEEEEEEcCCCCEEEEeCCCCCcHHHHHh--c--CCHHHHHHHHHHHH
Confidence 2222322 12 2333432 456789999999999988753 1 33333333333322
Q ss_pred --HHHHH---hcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 166 --AHQIY---VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 166 --l~~i~---~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
+..+| ..+++|||+||.||+++.+ +..++ +||..+
T Consensus 791 ~~L~yLH~~~~~~iiH~dlkp~Nil~~~~--~~~~~-~~~~~~ 830 (968)
T PLN00113 791 KALRFLHCRCSPAVVVGNLSPEKIIIDGK--DEPHL-RLSLPG 830 (968)
T ss_pred HHHHHhccCCCCCeecCCCCHHhEEECCC--CceEE-Eecccc
Confidence 67778 6699999999999999865 44443 355544
No 439
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=98.53 E-value=1.6e-07 Score=101.05 Aligned_cols=171 Identities=12% Similarity=0.116 Sum_probs=105.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
.-+|+|.||+|-....+ +++.|||||.+- + ..++++ -+.|.
T Consensus 95 ~~lGeGtFGkV~ec~D~~~~~~vAlKIik~---------------V-----------------~kYreA------a~iEi 136 (415)
T KOG0671|consen 95 DLLGEGTFGKVVECWDRETKEHVALKIIKN---------------V-----------------DKYREA------ALIEI 136 (415)
T ss_pred hhhcCCcccceEEEeecCCCceehHHHHHH---------------H-----------------HHHhhH------HHHHH
Confidence 45899999999999975 689999996541 1 111111 11245
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeE---Ee-cCCceEEEeecCCcCCCChHHHhh-cCCCH---HHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEV---IQ-SSETVLILEFMDGIRLNDCESLEA-FGVNK---QKVVEEI 161 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v---~~-~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~---~~l~~~~ 161 (864)
+.++++.+.-- .....+-.+ +. .+..+||.|.+ |.++.|.+.... ..+.. +.++.++
T Consensus 137 ~vLqki~~~DP--------------~g~~rcv~m~~wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL 201 (415)
T KOG0671|consen 137 EVLQKINESDP--------------NGKFRCVQMRDWFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQL 201 (415)
T ss_pred HHHHHHHhcCC--------------CCceEEEeeehhhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHH
Confidence 55556544210 111222223 22 67788999976 788888754321 11222 3344444
Q ss_pred HHHHHHHHHhcCeeccCCCCCCeEEccCC------------------CCceEEEecccccccChHHHHHHHHHHHHHHhC
Q 002927 162 TRAYAHQIYVDGFFNGDPHPGNFLVSKDP------------------PHRPILLDFGLTKKLSSSMKQALAKMFFAAAEG 223 (864)
Q Consensus 162 ~~~~l~~i~~~G~~H~D~hPgNIlv~~~~------------------~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~ 223 (864)
+++ +..+|..+++|-||||+||++.... ...|++||||.+..-.+.. ..++.-
T Consensus 202 ~~s-v~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h--------s~iVsT 272 (415)
T KOG0671|consen 202 LES-VAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH--------STIVST 272 (415)
T ss_pred HHH-HHHHHhcceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccCc--------ceeeec
Confidence 444 6678999999999999999975320 1347899999987655443 223333
Q ss_pred CHHHHHHHHHHcCCCcCCCc
Q 002927 224 DHVALLSAFAEMGLRLRLDV 243 (864)
Q Consensus 224 d~~~~~~~~~~~G~~~~~~~ 243 (864)
...++-+.+++||.....|.
T Consensus 273 RHYRAPEViLgLGwS~pCDv 292 (415)
T KOG0671|consen 273 RHYRAPEVILGLGWSQPCDV 292 (415)
T ss_pred cccCCchheeccCcCCccCc
Confidence 34456788889998755553
No 440
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.50 E-value=8e-07 Score=93.19 Aligned_cols=32 Identities=22% Similarity=0.264 Sum_probs=26.8
Q ss_pred cCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 172 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 172 ~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..++|+|+||+||+++++ + +.+|||+.++.=+
T Consensus 153 ~~~~HgD~~~~Nii~~~~--~-~~iIDwe~a~~Gd 184 (226)
T TIGR02172 153 STCLHGDFQIGNLITSGK--G-TYWIDLGDFGYGN 184 (226)
T ss_pred CceEecCCCCCcEEEcCC--C-cEEEechhcCcCC
Confidence 467899999999999854 5 9999999887543
No 441
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=98.47 E-value=1.8e-07 Score=99.14 Aligned_cols=180 Identities=14% Similarity=0.261 Sum_probs=120.8
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+-||-|--+-||.+-..+|++.++|+-|-|-.. ++.++.=-..+.. .-...++. ..-|.-.+|..
T Consensus 98 nqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtS-----FR~Vk~kRDY~r~---r~~~sWly-------LSRlaa~kEfa 162 (465)
T KOG2268|consen 98 NQIGVGKESDIYVVADEEGNPLILKLHRLGRTS-----FRNVKNKRDYLRK---RKSGSWLY-------LSRLAATKEFA 162 (465)
T ss_pred cccccccccceEEEecCCCCchhHHHHhhhhhh-----HHHhhhhhhhHhc---CCccchhh-------hHHHHHHHHHH
Confidence 568888889999999889999999976644321 1111111111110 00111110 11222345556
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHHHHHHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIY 170 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~l~~i~ 170 (864)
-++.+.+ ..+.||+++.+++++.|||+++|.+|..+..+ .++..+...++.++. .+-
T Consensus 163 fmkaL~e------------------~gfpVPkpiD~~RH~Vvmelv~g~Pl~~v~~v----~d~~~ly~~lm~~Iv-~la 219 (465)
T KOG2268|consen 163 FMKALYE------------------RGFPVPKPIDHNRHCVVMELVDGYPLRQVRHV----EDPPTLYDDLMGLIV-RLA 219 (465)
T ss_pred HHHHHHH------------------cCCCCCCcccccceeeHHHhhcccceeeeeec----CChHHHHHHHHHHHH-HHH
Confidence 6666654 25779999999999999999999999987432 356777777776654 456
Q ss_pred hcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHHHHHHHHHHHHHhCCHHHHHHHHH-HcCC
Q 002927 171 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFA-EMGL 237 (864)
Q Consensus 171 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~-~~G~ 237 (864)
.+|+||+|-.--||||.++ +++++|||-.+...+.+.-+.| ..+|.+=+.+.++ ..|.
T Consensus 220 ~~GlIHgDFNEFNimv~dd--~~i~vIDFPQmvS~sh~nA~~Y-------FdRDv~Ci~~fFrKkf~Y 278 (465)
T KOG2268|consen 220 NHGLIHGDFNEFNIMVKDD--DKIVVIDFPQMVSTSHPNAEYY-------FDRDVECIRAFFRKKFGY 278 (465)
T ss_pred HcCceecccchheeEEecC--CCEEEeechHhhccCCCcccee-------ecccHHHHHHHHHHhcCC
Confidence 8999999999999999965 8999999998888776655444 4566666665554 3454
No 442
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=98.40 E-value=1.8e-07 Score=98.44 Aligned_cols=100 Identities=19% Similarity=0.315 Sum_probs=69.5
Q ss_pred CCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 127 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 127 ~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
.+.++|||++++ +|.++.. ...|-+.+...+.+.+ ++.+|..||+||||||.||+|..+ +.++++|||++..
T Consensus 94 ~e~y~v~e~m~~-nl~~vi~---~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~--~~lKi~dfg~ar~ 167 (369)
T KOG0665|consen 94 QEVYLVMELMDA-NLCQVIL---MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSD--CTLKILDFGLART 167 (369)
T ss_pred HhHHHHHHhhhh-HHHHHHH---HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecch--hheeeccchhhcc
Confidence 456799999974 4444433 3356666766666655 888999999999999999999976 8999999999987
Q ss_pred cChHHHHHHHHHHHHHHhCCHHHHHHHHHHcCCC
Q 002927 205 LSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLR 238 (864)
Q Consensus 205 l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~G~~ 238 (864)
-...++-. -.+...+..+.+++.++|..
T Consensus 168 e~~~~~mt------pyVvtRyyrapevil~~~~k 195 (369)
T KOG0665|consen 168 EDTDFMMT------PYVVTRYYRAPEVILGMGYK 195 (369)
T ss_pred cCcccccC------chhheeeccCchheeccCCc
Confidence 66552211 11223344455666666643
No 443
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.38 E-value=8.3e-06 Score=86.49 Aligned_cols=34 Identities=18% Similarity=0.133 Sum_probs=27.6
Q ss_pred cCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 172 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 172 ~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..++|+|+||+|||++.+ +.+.||||+.++.-++
T Consensus 163 ~~l~HgD~~~~Nil~~~~--~~~~iIDwe~a~~gdp 196 (244)
T cd05150 163 LVVTHGDACLPNIIVDPG--KFSGFIDLGRLGVADR 196 (244)
T ss_pred eEEECCCCCCccEEEeCC--cEEEEEEccccccccH
Confidence 469999999999999853 5567999998875443
No 444
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.37 E-value=2.4e-06 Score=89.16 Aligned_cols=36 Identities=31% Similarity=0.378 Sum_probs=24.7
Q ss_pred hcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 171 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 171 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+++|+|+||+|||++++ ++++.||||+.++.-++
T Consensus 165 ~~~~~HgD~~~~Nil~~~~-~~~i~iID~e~a~~~~~ 200 (239)
T PF01636_consen 165 PPVLIHGDLHPGNILVDPS-DGRIGIIDFEDAGWGDP 200 (239)
T ss_dssp CEEEE-SS-SGGGEEEESS-TTEEEE--GTT-EEEET
T ss_pred CcEEEEeccccccceeeec-cceeEEEecccceECCH
Confidence 4679999999999999932 37788999999876544
No 445
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=98.35 E-value=1.6e-07 Score=103.73 Aligned_cols=78 Identities=19% Similarity=0.187 Sum_probs=59.5
Q ss_pred ceEEEeecCCcCCCChHHHhhcCCC--HHHHHHHHHHHHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 129 TVLILEFMDGIRLNDCESLEAFGVN--KQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 129 ~vLvmE~i~G~~L~~~~~~~~~~~~--~~~l~~~~~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
-|+.||-|-|+.|...+.- +..++ ..++.-.++--.+..+|++||+.|||||+|+|++.+ |-++|.|||.++.+.
T Consensus 495 vYmLmEaClGGElWTiLrd-Rg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~--Gy~KLVDFGFAKki~ 571 (732)
T KOG0614|consen 495 VYMLMEACLGGELWTILRD-RGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNR--GYLKLVDFGFAKKIG 571 (732)
T ss_pred hhhhHHhhcCchhhhhhhh-cCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccC--CceEEeehhhHHHhc
Confidence 4689999999999887542 22232 234444444444889999999999999999999966 999999999999886
Q ss_pred hHH
Q 002927 207 SSM 209 (864)
Q Consensus 207 ~~~ 209 (864)
...
T Consensus 572 ~g~ 574 (732)
T KOG0614|consen 572 SGR 574 (732)
T ss_pred cCC
Confidence 543
No 446
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=98.33 E-value=7.8e-06 Score=92.11 Aligned_cols=52 Identities=13% Similarity=0.353 Sum_probs=37.9
Q ss_pred hcCeeccCCCCCCeEEccCCCCceEEEecccc--cccChHHHHHHHHHHHHHHhCCH
Q 002927 171 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLT--KKLSSSMKQALAKMFFAAAEGDH 225 (864)
Q Consensus 171 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~--~~l~~~~r~~~~~l~~a~~~~d~ 225 (864)
...++|+|+||||||+..+ .+++|||=++ +...=+.-..+..++.+.+..+.
T Consensus 222 ~~~l~HgDl~~gni~~~~~---~~~viD~E~a~~G~~~~Dlg~~lanl~~~~~~~~~ 275 (401)
T PRK09550 222 AEALLHGDLHTGSIFVTEE---ETKVIDPEFAFYGPIGFDIGTFIANLLLNYCSQPG 275 (401)
T ss_pred CCceeeccCCcccEEeeCC---CcEEEeccccccCChHHHHHHHHHHHHHHHhcCcc
Confidence 3578999999999999753 6999998644 44444455567777777766544
No 447
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=98.31 E-value=3.7e-06 Score=88.77 Aligned_cols=34 Identities=35% Similarity=0.553 Sum_probs=27.1
Q ss_pred hcCeeccCCCCCCeEEccCCCCce-EEEecccccccCh
Q 002927 171 VDGFFNGDPHPGNFLVSKDPPHRP-ILLDFGLTKKLSS 207 (864)
Q Consensus 171 ~~G~~H~D~hPgNIlv~~~~~g~i-~LiDFG~~~~l~~ 207 (864)
..+++|+|+||+||+|+. +++ .||||+.+..=++
T Consensus 163 ~~~l~HGD~~~~Nvlv~~---~~i~giIDw~~a~~gDp 197 (235)
T cd05155 163 PPVWFHGDLAPGNLLVQD---GRLSAVIDFGCLGVGDP 197 (235)
T ss_pred CceEEeCCCCCCcEEEEC---CCEEEEEeCcccCcCCh
Confidence 356999999999999974 354 6999998776544
No 448
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=98.30 E-value=3.6e-06 Score=90.71 Aligned_cols=137 Identities=21% Similarity=0.246 Sum_probs=88.5
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.++.|++|+||++... ..+++|+..+...... .....+.+|..
T Consensus 6 ~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~----------------------------------~~~~~~~~e~~ 49 (384)
T COG0515 6 RKLGEGSFGEVYLARDR--KLVALKVLAKKLESKS----------------------------------KEVERFLREIQ 49 (384)
T ss_pred EeecCCCCeEEEEEEec--cEEEEEeechhhccch----------------------------------hHHHHHHHHHH
Confidence 46889999999999976 8899998775543221 00111334444
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhh--cCCCHHHHHHHHHHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEA--FGVNKQKVVEEITRA 164 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~--~~~~~~~l~~~~~~~ 164 (864)
-...+.+ .. .+.+++ . ....+++||++.|..+.++..... ...........+.+.
T Consensus 50 ~~~~~~~-----------------~~--~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (384)
T COG0515 50 ILASLNH-----------------PP--NIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQI 110 (384)
T ss_pred HHHHccC-----------------Cc--ceeeEEEEEecCCEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHH
Confidence 3333321 10 122222 2 233589999999999985543221 134444444444443
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCCC-ceEEEecccccc
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPH-RPILLDFGLTKK 204 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g-~i~LiDFG~~~~ 204 (864)
. +..+|..|++|||+||.||+++.. + .++++|||++..
T Consensus 111 ~~~l~~~H~~~~~hrd~kp~nil~~~~--~~~~~l~dfg~~~~ 151 (384)
T COG0515 111 LSALEYLHSKGIIHRDIKPENILLDRD--GRVVKLIDFGLAKL 151 (384)
T ss_pred HHHHHHHHhCCeeccCCCHHHeeecCC--CCeEEEeccCccee
Confidence 3 568999999999999999999965 5 699999999883
No 449
>PRK10593 hypothetical protein; Provisional
Probab=98.30 E-value=3.2e-06 Score=92.48 Aligned_cols=76 Identities=16% Similarity=0.131 Sum_probs=55.5
Q ss_pred ccccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 10 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
.++|+.|.+++||+....+| .++||+.+...... .+..|+
T Consensus 19 ~~~i~~G~~~~vy~~~~~~~-~~~~k~~~~~~~~~---------------------------------------~~~~Ea 58 (297)
T PRK10593 19 VECISEQPYAALWALYDSQG-NPMPLMARSFSTPG---------------------------------------VAQQEA 58 (297)
T ss_pred eeecCCccceeEEEEEcCCC-CEEEEEecccccch---------------------------------------HHHHHH
Confidence 37999999999999986556 58889865321110 155688
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-------cCCceEEEeecCCcCCC
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-------SSETVLILEFMDGIRLN 142 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-------~~~~vLvmE~i~G~~L~ 142 (864)
++++.+++. ..+.||+|+. .+..+|||||++|.++.
T Consensus 59 ~~L~~L~~~-----------------~~vpVP~V~~~~~~~~~~g~~~LVmE~i~G~~~~ 101 (297)
T PRK10593 59 WKLSMLARS-----------------GTVRMPTVYGVMTHEQSPGPDVLLLERLRGVSVE 101 (297)
T ss_pred HHHHHHccC-----------------CCCCcCcEEEEeccCCcCCCeEEEEeccCCEecC
Confidence 888888642 2478999994 14579999999998774
No 450
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.28 E-value=8.5e-06 Score=79.92 Aligned_cols=125 Identities=23% Similarity=0.371 Sum_probs=91.7
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+-||.|..|.||.+.. .|.+||+||||++.... .+..||+
T Consensus 28 ~~L~KG~~s~Vyl~~~-~~~~~a~Kvrr~ds~r~---------------------------------------~l~kEak 67 (201)
T COG2112 28 KELAKGTTSVVYLGEW-RGGEVALKVRRRDSPRR---------------------------------------NLEKEAK 67 (201)
T ss_pred hhhhcccccEEEEeec-cCceEEEEEecCCcchh---------------------------------------hHHHHHH
Confidence 5699999999999997 46699999999876532 1445787
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHHHHHHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIY 170 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~l~~i~ 170 (864)
-++.++.. -..|++|.-++..+.|||++|.+|.++.. +.+++.+.+.+-+++ -+=
T Consensus 68 iLeil~g~-------------------~~~p~vy~yg~~~i~me~i~G~~L~~~~~----~~~rk~l~~vlE~a~--~LD 122 (201)
T COG2112 68 ILEILAGE-------------------GVTPEVYFYGEDFIRMEYIDGRPLGKLEI----GGDRKHLLRVLEKAY--KLD 122 (201)
T ss_pred HHHHhhhc-------------------CCCceEEEechhhhhhhhhcCcchhhhhh----cccHHHHHHHHHHHH--HHH
Confidence 77776552 24689988777778899999999988643 225666665555544 223
Q ss_pred hcCeeccCCCCC--CeEEccCCCCceEEEeccccc
Q 002927 171 VDGFFNGDPHPG--NFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 171 ~~G~~H~D~hPg--NIlv~~~~~g~i~LiDFG~~~ 203 (864)
..||-|..++-+ ||++.+ +++.||||--++
T Consensus 123 ~~GI~H~El~~~~k~vlv~~---~~~~iIDFd~At 154 (201)
T COG2112 123 RLGIEHGELSRPWKNVLVND---RDVYIIDFDSAT 154 (201)
T ss_pred HhccchhhhcCCceeEEecC---CcEEEEEccchh
Confidence 569999999843 666642 589999998776
No 451
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=98.21 E-value=1.2e-06 Score=98.77 Aligned_cols=138 Identities=18% Similarity=0.185 Sum_probs=89.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
.-||-|-+|.||.|.++ -.-.||||.++.+.-+ ++ .|..||
T Consensus 273 hKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMe----------------------------ve----------EFLkEA 314 (1157)
T KOG4278|consen 273 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----------------------------VE----------EFLKEA 314 (1157)
T ss_pred eccCCCcccceeeeeeeccceeeehhhhhhcchh----------------------------HH----------HHHHHH
Confidence 56999999999999987 4678999965533211 11 155566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cC---CceEEEeecCCcCCCChHHHhhcC-CCHHHHHH--HHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SS---ETVLILEFMDGIRLNDCESLEAFG-VNKQKVVE--EIT 162 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~---~~vLvmE~i~G~~L~~~~~~~~~~-~~~~~l~~--~~~ 162 (864)
..++.+.|.. +-++.. |+ ..||+.||+.-+.|-|+++..... +..--++. ..+
T Consensus 315 AvMKeikHpN--------------------LVqLLGVCT~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQI 374 (1157)
T KOG4278|consen 315 AVMKEIKHPN--------------------LVQLLGVCTHEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQI 374 (1157)
T ss_pred HHHHhhcCcc--------------------HHHHhhhhccCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHH
Confidence 6655543310 001111 32 468999999888887775432211 11111111 222
Q ss_pred HHHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 163 RAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 163 ~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
...++++-..+||||||-..|.||.++ .-+++.|||+++.++.+
T Consensus 375 sSaMeYLEkknFIHRDLAARNCLVgEn--hiVKvADFGLsRlMtgD 418 (1157)
T KOG4278|consen 375 SSAMEYLEKKNFIHRDLAARNCLVGEN--HIVKVADFGLSRLMTGD 418 (1157)
T ss_pred HHHHHHHHHhhhhhhhhhhhhcccccc--ceEEeeccchhhhhcCC
Confidence 333677778999999999999999865 67889999998877644
No 452
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=98.16 E-value=5.9e-06 Score=99.28 Aligned_cols=139 Identities=16% Similarity=0.148 Sum_probs=94.3
Q ss_pred ccccccceeeEEEEec----C----CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhc
Q 002927 12 PLATASIAQVHRATLV----D----GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 83 (864)
Q Consensus 12 plasaSigqV~~A~l~----~----G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~El 83 (864)
++|+|.||+|++|.++ . ...||||..+......-..
T Consensus 303 ~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~------------------------------------ 346 (609)
T KOG0200|consen 303 YLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKK------------------------------------ 346 (609)
T ss_pred eeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHH------------------------------------
Confidence 9999999999999964 1 3579999877665442111
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---cCCceEEEeecCCcCCCChHHHhh-----------
Q 002927 84 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEA----------- 149 (864)
Q Consensus 84 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~~~----------- 149 (864)
++..|.+.+..+.. ++++ +.-+-. .+..++|+||++.+.|.+++...+
T Consensus 347 ~~~~El~~m~~~g~-----------------H~ni-v~llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~ 408 (609)
T KOG0200|consen 347 DLMSELNVLKELGK-----------------HPNI-VNLLGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVF 408 (609)
T ss_pred HHHHHHHHHHHhcC-----------------Ccch-hhheeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCC
Confidence 13334444444322 1111 111111 345789999999999988865444
Q ss_pred ----cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 150 ----FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 150 ----~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..+...++.....++. ++.+....++|||+-.-|||+..+ ..+++.|||+++...
T Consensus 409 ~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~--~~~kIaDFGlar~~~ 469 (609)
T KOG0200|consen 409 PNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITKN--KVIKIADFGLARDHY 469 (609)
T ss_pred ccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCC--CEEEEccccceeccC
Confidence 1155566666655555 677788999999999999999865 678999999998543
No 453
>PLN02756 S-methyl-5-thioribose kinase
Probab=98.13 E-value=2.4e-05 Score=87.79 Aligned_cols=51 Identities=20% Similarity=0.356 Sum_probs=36.5
Q ss_pred hcCeeccCCCCCCeEEccCCCCceEEEec--ccccccChHHHHHHHHHHHHHHhCC
Q 002927 171 VDGFFNGDPHPGNFLVSKDPPHRPILLDF--GLTKKLSSSMKQALAKMFFAAAEGD 224 (864)
Q Consensus 171 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDF--G~~~~l~~~~r~~~~~l~~a~~~~d 224 (864)
....+|+|+||||||+.++ ..++||. ...+...=+.-..+..++.+...++
T Consensus 229 ~~~L~HGDl~~g~i~~~~~---~~~~id~ef~~~g~~~~d~g~~~~~~~~~~~~~~ 281 (418)
T PLN02756 229 AQALVHGDLHTGSVMVTPD---STQVIDPEFAFYGPMGFDIGAFLGNLILAYFAQD 281 (418)
T ss_pred ccceeecCCCCCcEEEcCC---CceEecchhhccCchHHhHHHHHhhhHHHHhhCc
Confidence 3679999999999999864 5889994 5555544444456667777766554
No 454
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=98.13 E-value=2.1e-05 Score=82.77 Aligned_cols=77 Identities=17% Similarity=0.246 Sum_probs=54.2
Q ss_pred ccccccccceeeEEEEecC--CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHH
Q 002927 10 ETPLATASIAQVHRATLVD--GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 87 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~~--G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~ 87 (864)
-+|+..|-...||+....+ ++.|++|+..++... -+|..+
T Consensus 3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~--------------------------------------~~d~~~ 44 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTEL--------------------------------------IIDRER 44 (235)
T ss_pred EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccc--------------------------------------eecHHH
Confidence 4789999999999998764 689999987654221 123345
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCC
Q 002927 88 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLND 143 (864)
Q Consensus 88 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~ 143 (864)
|.+.+..++.. .+ +|+++...+..++|||++|.++..
T Consensus 45 E~~~~~~l~~~------------------gl-~P~v~~~~~~~~l~e~i~G~~l~~ 81 (235)
T cd05157 45 ELRIHKLLSKH------------------GL-APKLYATFQNGLIYEFIPGRTLEP 81 (235)
T ss_pred HHHHHHHHHhC------------------CC-CCeEEEEeCCcEEEEeeCCCcCCH
Confidence 77777666541 23 678876545678999999988753
No 455
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.09 E-value=4.6e-06 Score=95.11 Aligned_cols=76 Identities=16% Similarity=0.135 Sum_probs=57.1
Q ss_pred ceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhc--CeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 129 TVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVD--GFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 129 ~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~--G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
.++|.|.+.+++|..+.+ +....+.+.+-.++-+++ |..+|.+ -|+|||||-.||||+.. .|.++|.|.|++..
T Consensus 118 in~iTEL~TSGtLr~Y~k-k~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~-~G~VKIGDLGLAtl 195 (632)
T KOG0584|consen 118 INFITELFTSGTLREYRK-KHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGN-LGEVKIGDLGLATL 195 (632)
T ss_pred eeeeeecccCCcHHHHHH-HhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCC-cCceeecchhHHHH
Confidence 579999999999998854 233455554444444443 5566654 59999999999999863 69999999999886
Q ss_pred cC
Q 002927 205 LS 206 (864)
Q Consensus 205 l~ 206 (864)
+.
T Consensus 196 ~r 197 (632)
T KOG0584|consen 196 LR 197 (632)
T ss_pred hh
Confidence 54
No 456
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=98.07 E-value=4.2e-05 Score=81.82 Aligned_cols=137 Identities=18% Similarity=0.147 Sum_probs=84.7
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
.++..|-..++|+.. .+|+.++||+..++... -.+|..+|.+
T Consensus 2 ~~~~~G~tn~~y~~~-~~~~~~vlR~~~~~~~~-------------------------------------~~~~r~~E~~ 43 (256)
T TIGR02721 2 QTLSGGLTNRSWRIE-HPGISFVWRPQSPVCKA-------------------------------------LGVDRQREYQ 43 (256)
T ss_pred CcCCCcCcCCeEEEE-eCCccEEEeeCCccccc-------------------------------------ccCcHHHHHH
Confidence 467788889999987 47889999975543211 0134556777
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCCh--------HH-------Hhhc-----
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDC--------ES-------LEAF----- 150 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~--------~~-------~~~~----- 150 (864)
.++.+... .+ .|+++......++|||++|.++... .. +...
T Consensus 44 ~l~~l~~~------------------g~-~P~~i~~~~~~~v~e~i~G~~~~~~~~~~~~~~~~la~~l~~lH~~~~~~~ 104 (256)
T TIGR02721 44 ILQALSAL------------------GL-APKPILVNEHWLLVEWLEGEVITLDQFVALDLLLELAALLHQLHSQPRFGY 104 (256)
T ss_pred HHHHHHhc------------------CC-CCceEEEeCCEEEEEeccCcccccccccCchhHHHHHHHHHHHhCCCCCCC
Confidence 77776541 12 5888875567899999999887642 00 0000
Q ss_pred CCCHH-HHHHH---H--------HHHHHHHHH--------hcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 151 GVNKQ-KVVEE---I--------TRAYAHQIY--------VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 151 ~~~~~-~l~~~---~--------~~~~l~~i~--------~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+.. .+... + ....++.+. ...++|+|+||+||+++.+ + +.||||..++.=++
T Consensus 105 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~Nil~~~~--~-~~lIDwE~a~~gdp 178 (256)
T TIGR02721 105 PLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAYNLVVTPQ--G-LKLIDWEYASDGDI 178 (256)
T ss_pred CCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcCcEEEeCC--C-CEEEeccccCcCCH
Confidence 01111 11110 0 001122221 2369999999999999854 4 89999998886554
No 457
>PRK09902 hypothetical protein; Provisional
Probab=98.03 E-value=4.4e-05 Score=78.08 Aligned_cols=149 Identities=14% Similarity=0.145 Sum_probs=96.0
Q ss_pred ccccccccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 6 MDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 6 ~~fd~~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
+.+|+---+.|+.+.|++-.+ +|+.+=||-|.-.+...+ ..|. -+--|
T Consensus 19 ~wve~pN~~rgG~SgV~r~~~-~g~~~ylKrq~nhl~~s~----------------r~P~---------------g~ptf 66 (216)
T PRK09902 19 DWVEEPNYRRNGMSGVQCVER-NGKKLYVKRMTHHLFHSV----------------RYPF---------------GRPTI 66 (216)
T ss_pred ceecCCCcCCCCcceEEEEEe-CCcEEEEEeccCcccccc----------------cCCC---------------CchHH
Confidence 345555556799999999776 677899996642222110 0011 12236
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--------cCCceEEEeecCC-cCCCChHHHhh-cCCCH-
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--------SSETVLILEFMDG-IRLNDCESLEA-FGVNK- 154 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--------~~~~vLvmE~i~G-~~L~~~~~~~~-~~~~~- 154 (864)
.+|..+++++++. .+.||++.. .-+.+||+|-++| .+|.++..... ...+.
T Consensus 67 ~rE~~~L~~L~~~------------------GvPVP~pvf~~~~k~~~~~rA~LVTe~L~g~~~L~~~l~~~~~~~~~~~ 128 (216)
T PRK09902 67 VREVAVIKELERA------------------GVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDE 128 (216)
T ss_pred HHHHHHHHHHHHc------------------CCCCCccceeeeeccCCceEEEEEEEeCCCCccHHHHHhcCCcCCcchH
Confidence 7788899998773 355777764 1236899999987 46766632111 11121
Q ss_pred --HHHHHHHHHHHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 155 --QKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 155 --~~l~~~~~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
..+...+.+ .+.++|..|+.|+||-|-||+++.+++-.+.||||--++..
T Consensus 129 ~k~~il~~va~-~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~~ 180 (216)
T PRK09902 129 VRQAMLKAVAL-AFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRR 180 (216)
T ss_pred HHHHHHHHHHH-HHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccchh
Confidence 244444444 37899999999999999999998552223999999866543
No 458
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.00 E-value=1e-05 Score=89.70 Aligned_cols=128 Identities=17% Similarity=0.168 Sum_probs=72.8
Q ss_pred ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 10 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
.+-||-|-|+.|+.|... +.+-||+||++-.- .+.+.... |
T Consensus 83 ~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq--------------------------------hYtEaAlD------E 124 (590)
T KOG1290|consen 83 QRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ--------------------------------HYTEAALD------E 124 (590)
T ss_pred EEeccccccceeEEEeeccCCeEEEEEEEehhh--------------------------------HHHHHHHH------H
Confidence 367999999999999975 67899999987311 11111112 2
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-------c-CCceEEEeecCCcCCCChHHH-hhcCCCHHHHHH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-------S-SETVLILEFMDGIRLNDCESL-EAFGVNKQKVVE 159 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-------~-~~~vLvmE~i~G~~L~~~~~~-~~~~~~~~~l~~ 159 (864)
.+-+.+++..= ..+...-+|-+++. . ...+||.|++ |..|-.+... .-.|+....+-+
T Consensus 125 IklL~~v~~~D------------p~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~ 191 (590)
T KOG1290|consen 125 IKLLQQVREGD------------PNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKE 191 (590)
T ss_pred HHHHHHHHhcC------------CCCCCCceeeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHH
Confidence 22333333210 00111122333332 2 2356999988 6555554332 223444433333
Q ss_pred HHHHHH--HHHHH-hcCeeccCCCCCCeEEcc
Q 002927 160 EITRAY--AHQIY-VDGFFNGDPHPGNFLVSK 188 (864)
Q Consensus 160 ~~~~~~--l~~i~-~~G~~H~D~hPgNIlv~~ 188 (864)
.+.+++ |..+| +.||||-|+||+|||+..
T Consensus 192 I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~ 223 (590)
T KOG1290|consen 192 ICRQVLTGLDYLHRECGIIHTDLKPENVLLCS 223 (590)
T ss_pred HHHHHHHHHHHHHHhcCccccCCCcceeeeec
Confidence 332322 67777 579999999999999964
No 459
>PRK12396 5-methylribose kinase; Reviewed
Probab=97.96 E-value=2e-05 Score=87.92 Aligned_cols=52 Identities=23% Similarity=0.501 Sum_probs=42.8
Q ss_pred hcCeeccCCCCCCeEEccCCCCceEEEe--cccccccChHHHHHHHHHHHHHHhCCH
Q 002927 171 VDGFFNGDPHPGNFLVSKDPPHRPILLD--FGLTKKLSSSMKQALAKMFFAAAEGDH 225 (864)
Q Consensus 171 ~~G~~H~D~hPgNIlv~~~~~g~i~LiD--FG~~~~l~~~~r~~~~~l~~a~~~~d~ 225 (864)
...++|+|+|||||||+++ .+++|| |+..+.+.=+.-..+..++.+.+.++.
T Consensus 226 ~~aLlHGDlHtGSI~v~~~---~~kvIDpEFAfyGP~gFDiG~~lanll~ay~~~~~ 279 (409)
T PRK12396 226 AQALIHGDLHTGSVFVKND---STKVIDPEFAFYGPMGYDIGNVMANLMFAWVNADA 279 (409)
T ss_pred chhhccCcCCCCCEEecCC---ceEEEcccccccCCcHHHHHHHHHHHHHHHhcCcc
Confidence 4678999999999999864 699999 677777777777888899988876654
No 460
>PLN00181 protein SPA1-RELATED; Provisional
Probab=97.95 E-value=7.2e-06 Score=102.08 Aligned_cols=74 Identities=12% Similarity=0.114 Sum_probs=51.3
Q ss_pred CCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 127 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 127 ~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
...|++|||. +.+|.+++......++...+...+.+++ +..+|+.||+|||+||.|||+... |+++++|||++.
T Consensus 53 ~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~--~~~k~~d~~~~~ 128 (793)
T PLN00181 53 DSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSF--NHVSFIESASCS 128 (793)
T ss_pred chhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEccc--CcEEEeeccccC
Confidence 3457889987 4588877643233456666655555544 788999999999999999999743 455555555543
No 461
>PRK05231 homoserine kinase; Provisional
Probab=97.95 E-value=5.3e-05 Score=83.80 Aligned_cols=33 Identities=21% Similarity=0.244 Sum_probs=26.6
Q ss_pred hcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 171 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 171 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
..|++|+|+||+||+++.+ ....+|||+.++.-
T Consensus 186 p~~liHgD~~~~Nil~~~~--~~~~iIDf~~~~~~ 218 (319)
T PRK05231 186 PRGVIHADLFRDNVLFEGD--RLSGFIDFYFACND 218 (319)
T ss_pred CcccCCCCCCCCcEEEECC--ceEEEEecccccCC
Confidence 4599999999999999743 33479999988753
No 462
>PRK15442 beta-lactamase TEM; Provisional
Probab=97.85 E-value=0.0011 Score=71.72 Aligned_cols=36 Identities=31% Similarity=0.478 Sum_probs=33.8
Q ss_pred CCCCccccccccHHHHHHHHHHHHHCCCCCccCchh
Q 002927 413 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 448 (864)
Q Consensus 413 ~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~ 448 (864)
+.|..|+++|+.|.+++++++..+++|+++||++|.
T Consensus 57 n~d~~fp~aSt~K~~i~~avl~~v~~g~l~L~~~v~ 92 (284)
T PRK15442 57 RPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIH 92 (284)
T ss_pred cCCCcccchHHHHHHHHHHHHHHHHCCCCCCCceEE
Confidence 568889999999999999999999999999999876
No 463
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=97.84 E-value=0.00045 Score=74.79 Aligned_cols=35 Identities=31% Similarity=0.509 Sum_probs=28.4
Q ss_pred cCeeccCCCCCCeEEccCCCCce-EEEecccccccChH
Q 002927 172 DGFFNGDPHPGNFLVSKDPPHRP-ILLDFGLTKKLSSS 208 (864)
Q Consensus 172 ~G~~H~D~hPgNIlv~~~~~g~i-~LiDFG~~~~l~~~ 208 (864)
..++|+|+||+|||++++ +++ .||||+++..-++.
T Consensus 185 ~~lvHGD~~~~Nilv~~~--~~~~gviDWe~a~iGDPa 220 (276)
T cd05152 185 TVLVHGDLHPGHILIDED--ARVTGLIDWTEAKVGDPA 220 (276)
T ss_pred CeeEeCCCCCCcEEEeCC--CCEEEEECcHhcccCCHH
Confidence 468999999999999853 565 69999998876553
No 464
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.81 E-value=9.5e-05 Score=80.79 Aligned_cols=31 Identities=23% Similarity=0.313 Sum_probs=26.6
Q ss_pred cCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 172 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 172 ~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
.+++|+|+||+||+++.+ +.+.||||+.+..
T Consensus 175 ~~l~HgD~~~~Nil~~~~--~~~~iIDfe~a~~ 205 (296)
T cd05153 175 RGVIHADLFRDNVLFDGD--ELSGVIDFYFACT 205 (296)
T ss_pred CcCCccCcCcccEEEeCC--ceEEEeehhhhcC
Confidence 689999999999999854 4568999998775
No 465
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=97.74 E-value=7.7e-05 Score=80.20 Aligned_cols=40 Identities=28% Similarity=0.442 Sum_probs=30.3
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
...+|..|++|+|++|.|++++.+ |.+.|.||+.+.....
T Consensus 158 vA~Lh~~GlVHgdi~~~nfll~~~--G~v~Lg~F~~~~r~g~ 197 (288)
T PF14531_consen 158 VANLHSYGLVHGDIKPENFLLDQD--GGVFLGDFSSLVRAGT 197 (288)
T ss_dssp HHHHHHTTEEEST-SGGGEEE-TT--S-EEE--GGGEEETTE
T ss_pred HHHHhhcceEecccceeeEEEcCC--CCEEEcChHHHeecCc
Confidence 567799999999999999999976 9999999998776554
No 466
>PF00768 Peptidase_S11: D-alanyl-D-alanine carboxypeptidase This is family S11 in the peptidase classification. ; InterPro: IPR001967 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S11 (D-Ala-D-Ala carboxypeptidase A family, clan SE). The protein fold of the peptidase domain for members of this family resembles that of D-Ala-D-Ala-carboxypeptidase B, the type example for clan SE. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endo-peptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S27) of serine protease have been identified, these being grouped into 6 clans (SA, SB, SC, SE, SF and SG) on the basis of structural similarity and other functional evidence. Structures are known for four of the clans (SA, SB, SC and SE): these appear to be totally unrelated, suggesting at least four evolutionary origins of serine peptidases and possibly many more []. Not with standing their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C clans have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (SA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. Bacterial cell walls are complex structures containing amino acids and amino sugars, with alternating chains of N-acetylglucosamine and N-acetyl-muramic acid units linked by short peptides []: the link peptide in Escherichia coli is L-alanyl-D-isoglutamyl-L-meso-diaminopimelyl-D-alanine. The chains are usually cross-linked between the carboxyl of D-alanine and the free amino group of diaminopimelate. During the synthesis of peptidoglycan, the precursor has the described tetramer sequence with an added C-terminal D-alanine []. D-Ala-D-Ala carboxypeptidase A is involved in the metabolism of cell components []; it is synthesised with a leader peptide to target it to the cell membrane []. After cleavage of the leader peptide, the enzyme is retained in the membrane by a C-terminal anchor. There are three families of serine-type D-Ala-D-Ala peptidase, which are also known as low molecular weight penicillin-binding proteins. Family S11 contains only D-Ala-D-Ala peptidases, unlike families S12 and S13, which contain other enzymes, such as class C beta-lactamases and D-amino-peptidases []. Although these enzymes are serine proteases, some members of family S11 are partially inhibited by thiol-blocking agents [].; GO: 0009002 serine-type D-Ala-D-Ala carboxypeptidase activity, 0006508 proteolysis; PDB: 2BCF_A 1TVF_A 3MFD_B 1ES3_A 1ESI_A 1ES4_A 1ES2_A 1SKF_A 1ES5_A 1J9M_A ....
Probab=97.74 E-value=0.00023 Score=75.14 Aligned_cols=45 Identities=29% Similarity=0.432 Sum_probs=38.7
Q ss_pred ecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCCccCchh
Q 002927 391 KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 448 (864)
Q Consensus 391 ~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~ 448 (864)
..|++++++ +.+..+++||+||++|+++++..+++|+|+++++|.
T Consensus 20 ~tG~iL~~k-------------n~~~~~~~ASlTKlmTa~~~le~~~~~~l~~~~~v~ 64 (240)
T PF00768_consen 20 DTGKILYSK-------------NADEKRPPASLTKLMTAYVVLEAIKNGKLSLDDKVT 64 (240)
T ss_dssp TTSEEEEEE-------------STTSEBE-GGGHHHHHHHHHHHHHHTTSSTTTCEEE
T ss_pred CCCcChhhc-------------ccCceechhhHHHHHHHHHHHHHHHcCCCCcccccc
Confidence 568888864 567889999999999999999999999999998764
No 467
>COG1686 DacC D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane]
Probab=97.72 E-value=0.00019 Score=80.58 Aligned_cols=45 Identities=29% Similarity=0.417 Sum_probs=40.4
Q ss_pred ecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCCccCchh
Q 002927 391 KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 448 (864)
Q Consensus 391 ~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~ 448 (864)
..|++++++ +.|+.+++||+||++|+..++..++.|+|++|++|.
T Consensus 47 ~sGkVLy~k-------------n~d~~~~pASlTKlMTayv~~ea~~~gki~~~~~v~ 91 (389)
T COG1686 47 DSGKVLYSK-------------NADARRPPASLTKLMTAYVVLEALKAGKIKLDDKVT 91 (389)
T ss_pred CCCcEeecc-------------CCCCCCCccHHHHHHHHHHHHHHhhccCCCccceec
Confidence 678888753 678999999999999999999999999999999875
No 468
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=97.72 E-value=7.3e-05 Score=81.03 Aligned_cols=72 Identities=26% Similarity=0.460 Sum_probs=46.6
Q ss_pred ccccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 10 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
.+||+.|.|.++|+.+ .+++.+-||+........ |..|+
T Consensus 22 ~~~v~GG~i~~a~~~~-~~~~~~FvK~~~~~~~~~----------------------------------------f~~Ea 60 (288)
T PF03881_consen 22 IEPVSGGDINEAYRLD-TDGGSYFVKVNSESGRDM----------------------------------------FEGEA 60 (288)
T ss_dssp EEEE--SSSSEEEEEE-TTS-EEEEEEEEGGGCCH----------------------------------------HHHHH
T ss_pred eEecCCCChhheEEEE-CCCccEEEEecChhhHHH----------------------------------------HHHHH
Confidence 4799999999999988 588999999876322211 56688
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCc
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGI 139 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~ 139 (864)
..++.+++. ..+.||+|+. .+..+|+|||++..
T Consensus 61 ~gL~~L~~~-----------------~~~~vP~vi~~G~~~~~~fLlle~l~~~ 97 (288)
T PF03881_consen 61 EGLKALAEA-----------------NPIRVPKVIAWGEYDDDAFLLLEFLEMG 97 (288)
T ss_dssp HHHHHHCHT-----------------TTSBS--EEEEEE-SSCCEEEEE-----
T ss_pred HHHHHHHhc-----------------CCCCCCeEEEEEeecCCceEEEEeecCC
Confidence 888888552 2578999985 45679999999887
No 469
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.69 E-value=0.0002 Score=78.51 Aligned_cols=37 Identities=22% Similarity=0.299 Sum_probs=29.5
Q ss_pred hcCeeccCCCCCCeEEccC--CCCceEEEecccccccCh
Q 002927 171 VDGFFNGDPHPGNFLVSKD--PPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 171 ~~G~~H~D~hPgNIlv~~~--~~g~i~LiDFG~~~~l~~ 207 (864)
..++.|+|+||+|||++.+ .++.++||||..++.-++
T Consensus 178 ~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~~~p 216 (302)
T cd05156 178 PVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASYNYR 216 (302)
T ss_pred CceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCCCCc
Confidence 3578999999999999852 026799999999886554
No 470
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.68 E-value=0.00033 Score=77.04 Aligned_cols=33 Identities=24% Similarity=0.308 Sum_probs=27.6
Q ss_pred hcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 171 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 171 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
..+++|+|+|++||+++.+ +...+|||+.+..-
T Consensus 186 ~~~l~HgD~~~~Nvl~~~~--~~~~vIDfd~~~~~ 218 (307)
T TIGR00938 186 PRGVIHADLFPDNVLFDGD--SVKGVIDFYFACTD 218 (307)
T ss_pred CCccCCCCCCcCcEEEECC--ceEEEeecccccCc
Confidence 3799999999999999854 55689999988653
No 471
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=97.65 E-value=0.00022 Score=78.59 Aligned_cols=29 Identities=31% Similarity=0.517 Sum_probs=25.1
Q ss_pred eeccCCCCCCeEEccCCCCc-eEEEecccccc
Q 002927 174 FFNGDPHPGNFLVSKDPPHR-PILLDFGLTKK 204 (864)
Q Consensus 174 ~~H~D~hPgNIlv~~~~~g~-i~LiDFG~~~~ 204 (864)
++|+|+||+||+++.+ .. ..+||||-++.
T Consensus 199 iIH~D~~~~NVl~d~~--~~~~g~iDFdDa~~ 228 (331)
T COG2334 199 IIHGDLHPDNVLFDDD--TDVSGFIDFDDAGY 228 (331)
T ss_pred eeecCCCccceeEcCC--CCeeeEEEcccccc
Confidence 9999999999999965 33 78999998874
No 472
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=97.65 E-value=0.00021 Score=79.01 Aligned_cols=51 Identities=24% Similarity=0.438 Sum_probs=37.3
Q ss_pred hcCeeccCCCCCCeEEccCCCCceEEEeccc--ccccChHHHHHHHHHHHHHHhCC
Q 002927 171 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGL--TKKLSSSMKQALAKMFFAAAEGD 224 (864)
Q Consensus 171 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~--~~~l~~~~r~~~~~l~~a~~~~d 224 (864)
...++|+|+||||||+.++ .+++|||-+ .+...-+.-..+..++.+.+.++
T Consensus 191 ~~~llHGDl~~gNi~~~~~---~~~~iD~e~~~~G~~~~Dlg~~ianL~l~~~~~~ 243 (370)
T TIGR01767 191 AETLLHGDLHSGSIFVSEH---ETKVIDPEFAFYGPIGFDIGQFIANLFLNALSRD 243 (370)
T ss_pred cceeeeccCCcccEEEcCC---CCEEEcCcccccCchHhhHHHHHHHHHHHHhCcc
Confidence 3578999999999999753 588999864 44444445566777777766554
No 473
>PLN02876 acyl-CoA dehydrogenase
Probab=97.60 E-value=0.00023 Score=88.80 Aligned_cols=83 Identities=17% Similarity=0.278 Sum_probs=55.4
Q ss_pred ccccccccccceeeEEEEecCC---CEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 8 FVETPLATASIAQVHRATLVDG---RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 8 fd~~plasaSigqV~~A~l~~G---~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
+.-++++.|....+|+.+..+| ..+++|...++.... ...+
T Consensus 41 ~~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~------------------------------------~~~~ 84 (822)
T PLN02876 41 FKVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQ------------------------------------SAHA 84 (822)
T ss_pred eeEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCc------------------------------------cHHH
Confidence 3457889999999999887544 478888765542100 0112
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-c------CCceEEEeecCCcCCCC
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S------SETVLILEFMDGIRLND 143 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~------~~~vLvmE~i~G~~L~~ 143 (864)
+.+|++.++.+.. ...+.||+++. | +..++||||++|..+.+
T Consensus 85 ~~rE~~~l~~L~~-----------------~~~vpVP~v~~~~~d~~v~G~~flVME~v~G~~~~~ 133 (822)
T PLN02876 85 VEREYQVLRALGE-----------------HTDVPVPKVYCLCTDASVIGTAFYIMEYLEGRIFVD 133 (822)
T ss_pred HHHHHHHHHHHhh-----------------cCCCCCCcEEEEecCCCcCCCceEEEEecCCcccCC
Confidence 4567777777653 23578899885 2 34689999999987653
No 474
>PRK10001 D-alanyl-D-alanine carboxypeptidase fraction C; Provisional
Probab=97.57 E-value=0.00031 Score=79.22 Aligned_cols=45 Identities=22% Similarity=0.303 Sum_probs=39.0
Q ss_pred ecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCCccCchh
Q 002927 391 KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 448 (864)
Q Consensus 391 ~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~ 448 (864)
..|+++|++ +.|..+++||+||++|++.++..+++|+++||+.|.
T Consensus 48 ~TG~vL~~k-------------nad~~~~pAS~TKlMTa~v~~e~i~~g~l~ldd~v~ 92 (400)
T PRK10001 48 ASGKVLAEG-------------NADEKLDPASLTKIMTSYVVGQALKADKIKLTDMVT 92 (400)
T ss_pred CCCcChhhc-------------CcCCCcCchHHHHHHHHHHHHHHHHcCCCCCCCEEE
Confidence 578888753 557789999999999999999999999999999753
No 475
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.51 E-value=0.0023 Score=65.44 Aligned_cols=156 Identities=15% Similarity=0.189 Sum_probs=91.1
Q ss_pred ccccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 10 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
..|||+|+-=-||. +++....+|||.+|.....-... .++.....+... .++ +++|.
T Consensus 6 ~~~i~~G~~R~cy~--HP~dp~~cIKV~~~~~~~~~~~~-------~~~~k~~~~~~~--------~~~------~~~E~ 62 (199)
T PF10707_consen 6 SDLIAQGGERDCYQ--HPDDPNLCIKVMRPDRGERRRPF-------KRWLKRLRPKSR--------YRQ------NRREL 62 (199)
T ss_pred CcccccCCCceEEE--CCCCCCeEEEEEccccccccccc-------hhHHHhhcccch--------hHH------HHHHH
Confidence 47899998766664 34667899999998761111111 111111111111 112 33344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---cC-CceEEEeecC---C---cCCCChHHHhhcCCCHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SS-ETVLILEFMD---G---IRLNDCESLEAFGVNKQKVVE 159 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~-~~vLvmE~i~---G---~~L~~~~~~~~~~~~~~~l~~ 159 (864)
+...++.. . .+....++|++|. ++ -.-+|+|.|. | .+|.++. ...+++. -..
T Consensus 63 ~~y~~l~~--~------------~~~~~~~i~r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l--~~~~~~~--~~~ 124 (199)
T PF10707_consen 63 RYYKQLSL--R------------RGVDWSHIPRFYGFVETNLGLGLVVELIRDADGNISPTLEDYL--KEGGLTE--ELR 124 (199)
T ss_pred HHHHHHhh--c------------cCCcccccccEeEEEecCCceEEEEEEEECCCCCcCccHHHHH--HcCCccH--HHH
Confidence 44444331 0 1345678899885 32 2458888873 3 2333332 3334444 444
Q ss_pred HHHHHHHHHHHhcCeeccCCCCCCeEEccCCCC--ceEEEe-cccccccC
Q 002927 160 EITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPH--RPILLD-FGLTKKLS 206 (864)
Q Consensus 160 ~~~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g--~i~LiD-FG~~~~l~ 206 (864)
.+++-+.+.+++++|+.+|++|.||++....++ +++||| ||....++
T Consensus 125 ~~L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~~~~~~lvlIDG~G~~~~ip 174 (199)
T PF10707_consen 125 QALDEFKRYLLDHHIVIRDLNPHNIVVQRRDSGEFRLVLIDGLGEKELIP 174 (199)
T ss_pred HHHHHHHHHHHHcCCeecCCCcccEEEEecCCCceEEEEEeCCCCccccc
Confidence 555666888899999999999999999865443 599999 78655543
No 476
>PRK10793 D-alanyl-D-alanine carboxypeptidase fraction A; Provisional
Probab=97.43 E-value=0.00094 Score=75.55 Aligned_cols=45 Identities=22% Similarity=0.271 Sum_probs=39.6
Q ss_pred ecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCCccCchh
Q 002927 391 KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 448 (864)
Q Consensus 391 ~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~ 448 (864)
..|++++++ +.|..+.+||+||++|+++++..+++|+++||++|.
T Consensus 55 ~tG~vL~~k-------------nad~~~~pASlTKlMTa~lvleai~~g~l~ld~~v~ 99 (403)
T PRK10793 55 NSGKVLAEQ-------------NADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVT 99 (403)
T ss_pred CCCcEehhc-------------CcCCCcCCHHHHHHHHHHHHHHHHHcCCCCCCCEEE
Confidence 678888764 557889999999999999999999999999999874
No 477
>KOG2269 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.42 E-value=0.00046 Score=73.62 Aligned_cols=192 Identities=14% Similarity=0.182 Sum_probs=115.3
Q ss_pred ccccccccccccccceeeEEEEe---cC--------CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhh--CCCCChHH
Q 002927 4 MFMDFVETPLATASIAQVHRATL---VD--------GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWA--EPQYDFNP 70 (864)
Q Consensus 4 ~F~~fd~~plasaSigqV~~A~l---~~--------G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~--~~~~~~~~ 70 (864)
+|+.++ --|+.|--+.|..|.- .+ -+++||||-+-.+.+.-.+|-- +..-+++. ..+.+...
T Consensus 252 vle~i~-GiIsTGKEsvvlHAY~GS~E~~~qd~ql~ptecAIKvfKTTLnEFKnRd~Y----iKDDfRFKDRFSK~NpR~ 326 (531)
T KOG2269|consen 252 VLESID-GIISTGKESVVLHAYAGSNEHGHQDPQLSPTECAIKVFKTTLNEFKNRDEY----IKDDFRFKDRFSKQNPRG 326 (531)
T ss_pred hHHhhh-hhhhcCcceEEEEeccCcccccccCcccCchHHHHHHHHHHHHHHhhhhhh----hccchhhhhhhcccCcHH
Confidence 455554 3577777788877742 11 2568888755433332222211 11111100 12345556
Q ss_pred HHHHHHHHhHhhccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhc
Q 002927 71 IIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAF 150 (864)
Q Consensus 71 ~~~e~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~ 150 (864)
++.-|.+ .|..|+.|++.. ++.+|.|..-.++||||.||.-.-+..- ++...
T Consensus 327 i~~mWAE---------kEmhNL~RMq~~------------------GlpcP~vV~lkkhvLVMsFiGd~~~aAP-kLK~v 378 (531)
T KOG2269|consen 327 ILKMWAE---------KEMHNLSRMQKH------------------GLPCPQVVKLKKHVLVMSFIGDQGLAAP-KLKNV 378 (531)
T ss_pred HHHHHHH---------HHHHHHHHHHhc------------------CCCCCceeeeecceEEEEeecCCCCCCc-ccccc
Confidence 6665554 488899998762 5677888777889999999943222211 11111
Q ss_pred CC--C-HHHHHHHHHHHHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHHHHHHHHHHHHHhCCHHH
Q 002927 151 GV--N-KQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVA 227 (864)
Q Consensus 151 ~~--~-~~~l~~~~~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~ 227 (864)
.+ + +......+..+..+..++.-++|+|+.--|+|... |++.+||-..+...+....-. ++.+|-..
T Consensus 379 ~l~d~E~~~aY~q~~~~M~~lY~Ec~LVHADlSEyN~Lw~~---gKvw~IDVsQsvep~HP~~Le-------FL~RDc~N 448 (531)
T KOG2269|consen 379 ELTDDERRNAYDQVQSIMCRLYKECLLVHADLSEYNLLWTP---GKVWVIDVSQSVEPSHPRSLE-------FLTRDCQN 448 (531)
T ss_pred ccChHHHHHHHHHHHHHHHHHHHhhheeecchhhhhheecC---CceEEEechhccCCCCcchhH-------HHHHHHHH
Confidence 11 1 22333344444455556889999999999999984 699999998777655433222 34577788
Q ss_pred HHHHHHHcCCC
Q 002927 228 LLSAFAEMGLR 238 (864)
Q Consensus 228 ~~~~~~~~G~~ 238 (864)
++..+...|..
T Consensus 449 i~~FF~r~G~p 459 (531)
T KOG2269|consen 449 IITFFTRIGTP 459 (531)
T ss_pred HHHHHHhcCCC
Confidence 88888888874
No 478
>PRK06148 hypothetical protein; Provisional
Probab=97.40 E-value=0.0029 Score=80.37 Aligned_cols=35 Identities=29% Similarity=0.343 Sum_probs=28.3
Q ss_pred hcCeeccCCCCCCeEEccCCCCceE-EEeccccccc
Q 002927 171 VDGFFNGDPHPGNFLVSKDPPHRPI-LLDFGLTKKL 205 (864)
Q Consensus 171 ~~G~~H~D~hPgNIlv~~~~~g~i~-LiDFG~~~~l 205 (864)
..+++|+|+|+.||+++.+.++++. |||||-+..-
T Consensus 202 p~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~~ 237 (1013)
T PRK06148 202 PAQVIHNDANDYNILVDADDGERISGLIDFGDAVHA 237 (1013)
T ss_pred CcceECCCCCcccEEEcCCCCcceEEEEECcccccc
Confidence 4789999999999999865323665 9999988763
No 479
>PRK11397 dacD D-alanyl-D-alanine carboxypeptidase; Provisional
Probab=97.36 E-value=0.001 Score=74.85 Aligned_cols=44 Identities=14% Similarity=0.209 Sum_probs=38.3
Q ss_pred ecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCCccCch
Q 002927 391 KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENI 447 (864)
Q Consensus 391 ~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v 447 (864)
..|+++|++ +.|..+++||+||++|+++++..+++|+++||+.|
T Consensus 45 ~tG~vL~~k-------------n~d~~~~pASlTKlMTa~lv~eai~~g~l~ld~~v 88 (388)
T PRK11397 45 TTGQILTAG-------------NEHQQRNPASLTKLMTGYVVDRAIDSHRITPDDIV 88 (388)
T ss_pred CCCcChhhc-------------CcCCCcCCHHHHHHHHHHHHHHHHHcCCCCCCCEE
Confidence 567887753 55778999999999999999999999999999975
No 480
>PRK11768 serine/threonine protein kinase; Provisional
Probab=97.20 E-value=0.0019 Score=71.77 Aligned_cols=30 Identities=33% Similarity=0.463 Sum_probs=25.4
Q ss_pred hcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 171 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 171 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
..|++|+|+||+||+++ + .+.||||+.++.
T Consensus 195 ~~~liHgD~h~~NvL~~-d---~~~iIDFDd~~~ 224 (325)
T PRK11768 195 RLLRLHGDCHPGNILWR-D---GPHFVDLDDARM 224 (325)
T ss_pred CccceecCCCchhcccc-C---CcEEEeCCCCCC
Confidence 45899999999999994 2 478999998875
No 481
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.19 E-value=0.0032 Score=64.57 Aligned_cols=75 Identities=19% Similarity=0.311 Sum_probs=53.3
Q ss_pred ccccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 10 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
.+++.-|.|-+.|+-.. ...++-||+..-... --|..||
T Consensus 21 r~~v~gG~inea~~v~d-g~~~~FvK~n~~~~~----------------------------------------~~f~AEa 59 (286)
T COG3001 21 REEVSGGDINEAWRLRD-GTDPFFVKCNQREQL----------------------------------------SMFTAEA 59 (286)
T ss_pred ccccCCccccceeEeec-CCcceEEEecchhhH----------------------------------------HHHHHHH
Confidence 36777777777776653 467899997542111 1166788
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCC
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLN 142 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~ 142 (864)
..++.+++. ..+.||+|+. .+..+|||||++=.++.
T Consensus 60 ~gL~~la~s-----------------~ti~VP~vi~~G~~~~~sylVle~L~~~~~d 99 (286)
T COG3001 60 DGLELLARS-----------------NTITVPKVIAVGASRDHSYLVLEYLPTGPLD 99 (286)
T ss_pred HHHHHHHhc-----------------CCccccceEEecCCCCeeEEEEeeccCCCCC
Confidence 888888763 2589999996 35689999999987776
No 482
>PLN02236 choline kinase
Probab=97.04 E-value=0.004 Score=69.64 Aligned_cols=35 Identities=17% Similarity=0.376 Sum_probs=29.1
Q ss_pred cCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 172 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 172 ~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+.|+|++++|||++++ ++.++||||..++.-++
T Consensus 200 ~~~cH~Dl~~~Nil~~~~-~~~~~lID~Eya~~~~~ 234 (344)
T PLN02236 200 IGFCHNDLQYGNIMIDEE-TRAITIIDYEYASYNPV 234 (344)
T ss_pred ceEEeCCCCcCcEEEeCC-CCcEEEEeehhccccch
Confidence 479999999999999853 36899999999886544
No 483
>PRK11669 pbpG D-alanyl-D-alanine endopeptidase; Provisional
Probab=96.86 E-value=0.0046 Score=67.26 Aligned_cols=41 Identities=34% Similarity=0.486 Sum_probs=33.7
Q ss_pred ecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCCccCchh
Q 002927 391 KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 448 (864)
Q Consensus 391 ~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~ 448 (864)
..|++++++ ++|..++++|+||++|+..++. ++++||++|.
T Consensus 50 ~tG~vL~~k-------------N~d~~~~pASlTKlmTalvvle----~~l~ld~~v~ 90 (306)
T PRK11669 50 NTNKVIYSS-------------NPDLVVPIASITKLMTAMVVLD----AKLPLDEKLK 90 (306)
T ss_pred CCCcEEEeE-------------CcCCCcCchHHHHHHHHHHHHH----cCCCCCCEEE
Confidence 578888853 5578899999999999999873 5789998764
No 484
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=96.74 E-value=0.0015 Score=71.10 Aligned_cols=73 Identities=14% Similarity=0.146 Sum_probs=46.3
Q ss_pred CceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCC--ceEEEeccccc
Q 002927 128 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPH--RPILLDFGLTK 203 (864)
Q Consensus 128 ~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g--~i~LiDFG~~~ 203 (864)
..+|||..-+ .+|..+.-.+. .....-.-.+++++ ..++|++|+-|||+|..|||+.-++|+ .+|+.||||+-
T Consensus 317 tlylvMkrY~-~tLr~yl~~~~--~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcL 393 (598)
T KOG4158|consen 317 TLYLVMKRYR-QTLREYLWTRH--RSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCL 393 (598)
T ss_pred eEEEehhcch-hhHHHHHhcCC--CchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceee
Confidence 4578888764 45554432221 12221122222222 667899999999999999999755443 58899999874
No 485
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=96.67 E-value=0.0079 Score=66.91 Aligned_cols=34 Identities=21% Similarity=0.334 Sum_probs=28.3
Q ss_pred CeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 173 GFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 173 G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
-+.|.|++|+|||+.++ ++++.||||..++.-++
T Consensus 183 v~CHnDl~~~NiL~~~~-~~~l~lID~EYag~nd~ 216 (330)
T PLN02421 183 VFAHNDLLSGNLMLNED-EGKLYFIDFEYGSYSYR 216 (330)
T ss_pred EEEECCCCcccEEEeCC-CCcEEEEcccccCCCcc
Confidence 38999999999999753 36899999999886554
No 486
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=96.62 E-value=0.0017 Score=77.65 Aligned_cols=70 Identities=16% Similarity=0.224 Sum_probs=49.5
Q ss_pred EeecCCcCCCChHHHh-hc-CCCHHHHHHHHHHHHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 133 LEFMDGIRLNDCESLE-AF-GVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 133 mE~i~G~~L~~~~~~~-~~-~~~~~~l~~~~~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
||||++ +|..+.... .. ..+...+.+.++.. ++.+|..|+-|||+||.|+++... |.++++|||.+..+.
T Consensus 400 mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~G-v~y~h~~GiahrdlK~enll~~~~--g~lki~Dfg~~~vf~ 471 (601)
T KOG0590|consen 400 MEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRG-VKYLHSMGLAHRDLKLENLLVTEN--GILKIIDFGAASVFR 471 (601)
T ss_pred hhcccH-HHHHHHhcccccchhhhhHHHHHHHHH-HHHHHhcCceeccCccccEEEecC--CceEEeecCcceeec
Confidence 999999 777764322 11 11222233333322 678899999999999999999975 899999999876543
No 487
>PRK06149 hypothetical protein; Provisional
Probab=96.62 E-value=0.0084 Score=76.13 Aligned_cols=34 Identities=24% Similarity=0.130 Sum_probs=27.7
Q ss_pred hcCeeccCCCCCCeEEccCCCCce---EEEecccccc
Q 002927 171 VDGFFNGDPHPGNFLVSKDPPHRP---ILLDFGLTKK 204 (864)
Q Consensus 171 ~~G~~H~D~hPgNIlv~~~~~g~i---~LiDFG~~~~ 204 (864)
..|++|+|+|+.||+|+.+.++.+ .|||||-+..
T Consensus 207 ~~g~IH~Dl~~~Nilv~~~~~~~~~v~giIDFgD~~~ 243 (972)
T PRK06149 207 PLQAVHLDITDDNVVGSRDADGRWQPDGVIDFGDLVR 243 (972)
T ss_pred cccccCCCCCcccEEEcCCCCCCcceeEEEEcccchh
Confidence 689999999999999986532443 7999998764
No 488
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=96.46 E-value=0.0014 Score=79.54 Aligned_cols=36 Identities=28% Similarity=0.252 Sum_probs=30.0
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
+.|+|+.|+.|+|+|-+||||+.= .=+.|.||-.-+
T Consensus 133 l~qcH~~gVcHGDIKsENILiTSW--NW~~LtDFAsFK 168 (1431)
T KOG1240|consen 133 LSQCHKLGVCHGDIKSENILITSW--NWLYLTDFASFK 168 (1431)
T ss_pred HHHHHHcCccccccccceEEEeee--chhhhhcccccC
Confidence 889999999999999999999853 346777887544
No 489
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=96.38 E-value=0.012 Score=64.44 Aligned_cols=36 Identities=22% Similarity=0.351 Sum_probs=30.2
Q ss_pred hcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 171 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 171 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
...++|+|.|+|||+++++ +.+.+|||+++..=++.
T Consensus 197 ~~~lvHGD~~~gNlii~~~--~~~gVlDwe~~~lGDP~ 232 (321)
T COG3173 197 PPVLVHGDYRPGNLIIDPG--RPTGVLDWELATLGDPL 232 (321)
T ss_pred CceeeeCCcccCCEEEeCC--CeeEEEeccccccCCcH
Confidence 3579999999999999965 56999999998876653
No 490
>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []. Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process
Probab=96.36 E-value=0.0057 Score=64.98 Aligned_cols=32 Identities=25% Similarity=0.249 Sum_probs=28.3
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIK 42 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~ 42 (864)
.++..|+.+.|++++..+|+++++|+..|.-.
T Consensus 8 ~~~~~g~~s~V~pv~~~dG~~avLKl~~p~~~ 39 (253)
T PF04655_consen 8 GPPAHGSSSLVVPVRRADGTPAVLKLAPPHAE 39 (253)
T ss_pred CCCCCCcceEEEEEEcCCCCeEEEEecCCccc
Confidence 57889999999999989999999999887543
No 491
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=96.34 E-value=0.0018 Score=78.54 Aligned_cols=37 Identities=32% Similarity=0.479 Sum_probs=33.8
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
++.+|..|++|||+||.|++|..- |.+++.|||+.+.
T Consensus 156 ~Eylh~ygivhrdlkpdnllIT~m--GhiKlTDfgLsk~ 192 (1205)
T KOG0606|consen 156 VEYLHSYGIVHRDLKPDNLLITSM--GHIKLTDFGLSKK 192 (1205)
T ss_pred hHhhccCCeecCCCCCCcceeeec--ccccccchhhhhh
Confidence 788999999999999999999965 9999999998664
No 492
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=96.21 E-value=0.0071 Score=69.98 Aligned_cols=104 Identities=20% Similarity=0.128 Sum_probs=70.2
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
.++.+|+++|+.|..+...... ..-.+.......+++.. +.++|..|++|+|+|+.||+++.+ |.+++.|||..+
T Consensus 69 ~~kl~l~ld~~rgg~lft~l~~-~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~--Ghi~~tdfglsk 145 (612)
T KOG0603|consen 69 DGKLYLILDFLRGGDLFTRLSK-EVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLE--GHIKLTDFGLSK 145 (612)
T ss_pred ccchhHhhhhcccchhhhcccc-CCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeeccc--CccccCCchhhh
Confidence 6788999999999776543221 11122333333333333 788899999999999999999966 999999999988
Q ss_pred ccChHHHHHHHHHHHHHHhCCHHHHHHHHHHcCCCcCCCc
Q 002927 204 KLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRLRLDV 243 (864)
Q Consensus 204 ~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~G~~~~~~~ 243 (864)
.+-+.... +++++.++..+.. |.....|-
T Consensus 146 e~v~~~~~----------cgt~eymApEI~~-gh~~a~D~ 174 (612)
T KOG0603|consen 146 EAVKEKIA----------CGTYEYRAPEIIN-GHLSAADW 174 (612)
T ss_pred HhHhhhhc----------ccchhhhhhHhhh-ccCCcccc
Confidence 77655444 5566555555555 44333343
No 493
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=96.13 E-value=0.018 Score=59.59 Aligned_cols=34 Identities=26% Similarity=0.377 Sum_probs=22.2
Q ss_pred cCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 172 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 172 ~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..+.|.|++|+|||+.. .++++.||||-.++.-+
T Consensus 143 ~v~cHnDl~~~Nil~~~-~~~~~~lIDfEya~~n~ 176 (211)
T PF01633_consen 143 LVFCHNDLNPGNILINN-KDGEVKLIDFEYAGYND 176 (211)
T ss_dssp EEEE-S--SGGGEEETS-SSSCEEE--GTT-EEEE
T ss_pred ceEeeccCccccEEecc-CCCeEEEecHHHHhhcc
Confidence 57899999999999932 23899999999888644
No 494
>PRK10271 thiK thiamine kinase; Provisional
Probab=95.26 E-value=0.058 Score=54.53 Aligned_cols=34 Identities=21% Similarity=0.169 Sum_probs=28.6
Q ss_pred hcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 171 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 171 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..-..|+|+||+||++.++ .++||||+.++.-++
T Consensus 76 ~~~p~H~D~~~~N~~~~~~---~~~lIDwe~a~~gDp 109 (188)
T PRK10271 76 RLAPLHMDVHAGNLVHSAS---GLRLIDWEYAGDGDI 109 (188)
T ss_pred CeeeecCCCCCccEEEECC---CEEEEeCCcccCCCH
Confidence 3467999999999999753 499999999987666
No 495
>PTZ00384 choline kinase; Provisional
Probab=95.00 E-value=0.14 Score=57.94 Aligned_cols=30 Identities=20% Similarity=0.152 Sum_probs=25.4
Q ss_pred cCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 172 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 172 ~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
..+.|-|++++||+... +++.||||=.++.
T Consensus 227 ~VfCHNDL~~gNIL~~~---~~l~lID~EYA~~ 256 (383)
T PTZ00384 227 VLFCHNDLFFTNILDFN---QGIYFIDFDFAGF 256 (383)
T ss_pred eeeeeccCCcccEEecC---CCEEEEEeccccC
Confidence 58899999999999753 4799999987764
No 496
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=94.67 E-value=0.0051 Score=69.81 Aligned_cols=76 Identities=20% Similarity=0.286 Sum_probs=52.0
Q ss_pred ceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHHHHHHH---h-cCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 129 TVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIY---V-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 129 ~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~l~~i~---~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
.++.|++|+-.+|.||+.-...+..+. . .+..-..+|+- + .|.+|+|+||.||+...+ .+++|.|||++..
T Consensus 331 lyI~Mn~c~~~tledWl~rr~~~e~~s-~--s~~~~~~~q~~~~~~yk~~ihrdlkp~nif~~~d--~q~kIgDFgl~ts 405 (516)
T KOG1033|consen 331 LYIQMNLCEKETLEDWLRRRRTGEERS-L--SLMLDIFKQIAPAVEYKGLIHRDLKPSNIFFSDD--DQLKIGDFGLVTS 405 (516)
T ss_pred hhhhhhhhhhhhHHHHhhCCCcccccc-h--hHHHHHHHhhccchhhccchhhhccccccccccc--hhhhhhhhhheee
Confidence 568999999999999965333222111 1 11111122221 1 899999999999999865 6899999999988
Q ss_pred cChHH
Q 002927 205 LSSSM 209 (864)
Q Consensus 205 l~~~~ 209 (864)
.+...
T Consensus 406 ~~~~~ 410 (516)
T KOG1033|consen 406 QDKDE 410 (516)
T ss_pred cccCC
Confidence 76554
No 497
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=94.10 E-value=0.37 Score=49.27 Aligned_cols=25 Identities=28% Similarity=0.379 Sum_probs=22.6
Q ss_pred cccccccc-eeeEEEEecCCCEEEEEE
Q 002927 11 TPLATASI-AQVHRATLVDGRQVVVKV 36 (864)
Q Consensus 11 ~plasaSi-gqV~~A~l~~G~~VAVKv 36 (864)
+=||.|+- |.|++++. +|+.+|||+
T Consensus 43 efLg~g~~~~~V~kv~I-~g~~YALKl 68 (207)
T PF13095_consen 43 EFLGHGSHDGYVFKVEI-DGRIYALKL 68 (207)
T ss_pred eecCCCCceeEEEEEEE-CCeEEEEEE
Confidence 45899999 99999997 789999998
No 498
>PTZ00296 choline kinase; Provisional
Probab=94.10 E-value=0.31 Score=56.33 Aligned_cols=79 Identities=18% Similarity=0.253 Sum_probs=54.5
Q ss_pred cccccccccccceeeEEEEecC---------CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHH
Q 002927 7 DFVETPLATASIAQVHRATLVD---------GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCK 77 (864)
Q Consensus 7 ~fd~~plasaSigqV~~A~l~~---------G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~ 77 (864)
+++-+||..|=--++|+....+ ++.|+|||-.++....+
T Consensus 107 ~I~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~te~lI-------------------------------- 154 (442)
T PTZ00296 107 DVRVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDVDELY-------------------------------- 154 (442)
T ss_pred cEEEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCcccee--------------------------------
Confidence 4555889888889999998642 56899998777665332
Q ss_pred HhHhhccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCC
Q 002927 78 EAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLN 142 (864)
Q Consensus 78 ~~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~ 142 (864)
|-..|..+...+.+. . .-|+++.....+.+.||++|.++.
T Consensus 155 ------dR~~E~~v~~~ls~~------------------g-i~P~l~~~f~gg~I~efi~g~~l~ 194 (442)
T PTZ00296 155 ------NPISEFEVYKTMSKY------------------R-IAPQLLNTFSGGRIEEWLYGDPLR 194 (442)
T ss_pred ------CHHHHHHHHHHHHHC------------------C-CCCceEEEeCCCEEEEeeCCccCC
Confidence 233466666666552 0 135666655678899999998665
No 499
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=93.23 E-value=0.099 Score=53.17 Aligned_cols=83 Identities=18% Similarity=0.218 Sum_probs=54.8
Q ss_pred EEeeEEecCCceEEEeecCCcCCC-------ChHHHhhcCCCHHHHHHHHHHHHHHHHHh---cCeeccCCCCCCeEEcc
Q 002927 119 LIPEVIQSSETVLILEFMDGIRLN-------DCESLEAFGVNKQKVVEEITRAYAHQIYV---DGFFNGDPHPGNFLVSK 188 (864)
Q Consensus 119 ~vP~v~~~~~~vLvmE~i~G~~L~-------~~~~~~~~~~~~~~l~~~~~~~~l~~i~~---~G~~H~D~hPgNIlv~~ 188 (864)
++|+++.+-.++.+.||+...++. ++.. ..-..+.+++..+++++ +.+.. ..|+-+|.+|+|+-|++
T Consensus 21 ~~pk~lG~CG~~~v~E~~~~~~~~~~~~~l~~~~~--~~w~~R~~iA~~lL~~l-~~l~~~~~~~~~lcDv~~~nfgv~~ 97 (188)
T PF12260_consen 21 PFPKLLGSCGRFYVVEYVGAGSLYGIYRPLSQFLQ--SPWEQRAKIALQLLELL-EELDHGPLGFFYLCDVSPDNFGVND 97 (188)
T ss_pred CCCCeeeECCCEEEEEeecCccccccccccccccc--cCHHHHHHHHHHHHHHH-HHHhcCCCCcEEEeecchHHeEEeC
Confidence 789999855567799999876543 3211 00011334445455443 33322 45888999999999996
Q ss_pred CCCCceEEEecccccccC
Q 002927 189 DPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 189 ~~~g~i~LiDFG~~~~l~ 206 (864)
+ |+++++|...+...+
T Consensus 98 ~--~~lk~iDld~v~~~~ 113 (188)
T PF12260_consen 98 D--GRLKLIDLDDVFVED 113 (188)
T ss_pred C--CcEEEEechhcchhH
Confidence 5 899999999877654
No 500
>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain. subfamily of choline kinases
Probab=92.83 E-value=0.096 Score=53.62 Aligned_cols=37 Identities=24% Similarity=0.295 Sum_probs=30.5
Q ss_pred hcCeeccCCCCCCeEEccCCCC---ceEEEecccccccCh
Q 002927 171 VDGFFNGDPHPGNFLVSKDPPH---RPILLDFGLTKKLSS 207 (864)
Q Consensus 171 ~~G~~H~D~hPgNIlv~~~~~g---~i~LiDFG~~~~l~~ 207 (864)
...+.|+|+|++|||+..+++| .+.|+||..++.-++
T Consensus 119 ~~vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~~g~p 158 (196)
T smart00587 119 FNVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSHYGSP 158 (196)
T ss_pred ceEEeeCCCCccceeeccCCCCCccceEEEecccCCcCCh
Confidence 4689999999999999865334 689999999887665
Done!