Query 002932
Match_columns 864
No_of_seqs 448 out of 3057
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 07:02:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002932.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002932hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3zyv_A AOH1; oxidoreductase, m 100.0 6E-179 2E-183 1688.6 57.6 794 8-863 4-827 (1335)
2 3unc_A Xanthine dehydrogenase/ 100.0 1E-172 5E-177 1620.9 68.4 791 13-863 5-822 (1332)
3 2w3s_A Xanthine dehydrogenase; 100.0 1E-104 5E-109 908.7 34.9 444 12-549 1-453 (462)
4 1vlb_A Aldehyde oxidoreductase 100.0 8.1E-92 2.8E-96 862.8 39.2 424 12-863 2-443 (907)
5 1dgj_A Aldehyde oxidoreductase 100.0 1.3E-91 4.4E-96 861.1 37.4 425 12-863 2-445 (907)
6 3nvz_B Xanthine dehydrogenase/ 100.0 3.8E-59 1.3E-63 509.7 28.8 294 233-550 2-304 (305)
7 3hrd_C Nicotinate dehydrogenas 100.0 2.2E-58 7.7E-63 501.3 24.2 277 240-550 3-290 (296)
8 3nvw_A Xanthine dehydrogenase/ 100.0 2E-59 6.9E-64 458.9 14.1 162 11-184 2-163 (164)
9 3hrd_A Nicotinate dehydrogenas 100.0 3.3E-58 1.1E-62 523.2 23.9 254 599-863 3-261 (425)
10 1t3q_C Quinoline 2-oxidoreduct 100.0 3.3E-56 1.1E-60 482.5 26.8 271 240-550 5-283 (288)
11 1n62_C Carbon monoxide dehydro 100.0 4.3E-55 1.5E-59 474.2 26.7 274 240-550 5-286 (288)
12 1rm6_B 4-hydroxybenzoyl-COA re 100.0 8.5E-55 2.9E-59 476.4 25.5 270 240-548 6-322 (324)
13 3nvz_C Xanthine dehydrogenase/ 100.0 2.3E-55 8E-60 530.7 22.4 251 602-863 1-252 (755)
14 1rm6_A 4-hydroxybenzoyl-COA re 100.0 1.1E-54 3.7E-59 526.8 22.8 256 599-863 6-268 (769)
15 3hrd_D Nicotinate dehydrogenas 100.0 1.2E-54 4.1E-59 425.6 18.4 152 11-186 3-154 (160)
16 2w3s_B Xanthine dehydrogenase; 100.0 7.3E-54 2.5E-58 519.6 23.9 250 603-863 2-252 (777)
17 1t3q_B Quinoline 2-oxidoreduct 100.0 1.1E-53 3.7E-58 519.3 19.6 253 603-863 13-278 (788)
18 1ffv_C CUTM, flavoprotein of c 100.0 2.7E-52 9.1E-57 452.1 27.1 273 240-549 5-285 (287)
19 1ffv_B CUTL, molybdoprotein of 100.0 1.9E-53 6.6E-58 517.5 17.5 254 602-863 16-291 (803)
20 1n62_B Carbon monoxide dehydro 100.0 2.1E-53 7.1E-58 518.1 16.8 254 602-863 19-294 (809)
21 1ffv_A CUTS, iron-sulfur prote 100.0 1E-51 3.5E-56 407.3 17.3 152 11-186 3-154 (163)
22 1n62_A Carbon monoxide dehydro 100.0 1.4E-51 4.9E-56 407.4 17.5 153 11-186 3-155 (166)
23 1rm6_C 4-hydroxybenzoyl-COA re 100.0 5.4E-47 1.9E-51 374.6 16.9 153 10-186 1-153 (161)
24 1t3q_A Quinoline 2-oxidoreduct 100.0 1.8E-42 6E-47 345.6 16.5 153 9-185 7-159 (168)
25 3vr8_B Iron-sulfur subunit of 98.9 9E-10 3.1E-14 117.9 6.9 69 21-101 55-128 (282)
26 2wdq_B Succinate dehydrogenase 98.9 2.5E-09 8.5E-14 112.3 8.0 68 21-100 21-95 (238)
27 2bs2_B Quinol-fumarate reducta 98.8 1.7E-08 5.7E-13 106.2 10.5 69 21-101 24-96 (241)
28 3c8y_A Iron hydrogenase 1; dit 98.8 3.7E-09 1.3E-13 124.6 5.9 107 14-138 2-115 (574)
29 2h88_B Succinate dehydrogenase 98.7 1.5E-08 5.2E-13 107.3 8.9 82 8-101 6-104 (252)
30 1kf6_B Fumarate reductase iron 98.3 5.4E-07 1.8E-11 94.7 7.7 68 21-101 24-95 (243)
31 1l5p_A Ferredoxin; [2Fe-2S] cl 98.2 8.3E-06 2.8E-10 72.7 9.9 79 13-93 2-91 (93)
32 2wlb_A ETP1-FD, electron trans 97.8 2.2E-05 7.4E-10 71.3 5.9 54 9-65 1-56 (103)
33 1iue_A Ferredoxin; electron tr 97.8 3.2E-05 1.1E-09 69.5 6.9 51 11-64 2-52 (98)
34 1uxy_A MURB, uridine diphospho 97.8 2.1E-05 7.2E-10 86.6 6.3 153 240-422 15-180 (340)
35 1a70_A Ferredoxin; iron-sulfur 97.7 4.3E-05 1.5E-09 68.6 6.9 51 11-64 2-52 (97)
36 1jq4_A Methane monooxygenase c 97.7 2.2E-05 7.5E-10 70.6 4.6 51 11-64 2-55 (98)
37 1hsk_A UDP-N-acetylenolpyruvoy 97.7 3.3E-05 1.1E-09 84.7 6.5 153 241-422 50-208 (326)
38 1wri_A Ferredoxin II, ferredox 97.6 9.4E-05 3.2E-09 65.8 7.0 49 12-64 2-50 (93)
39 1frr_A Ferredoxin I; electron 97.6 8.2E-05 2.8E-09 66.2 6.3 49 12-64 2-51 (95)
40 1awd_A Ferredoxin; electron tr 97.6 0.00013 4.3E-09 65.1 7.5 49 13-64 2-50 (94)
41 1frd_A Heterocyst [2Fe-2S] fer 97.5 0.00011 3.9E-09 65.8 6.7 51 11-64 2-54 (98)
42 1czp_A Ferredoxin I; [2Fe-2S] 97.4 0.00023 8E-09 63.8 6.2 51 11-64 2-54 (98)
43 3lxf_A Ferredoxin; iron, iron- 97.3 0.00029 9.9E-09 64.0 6.0 80 13-94 2-99 (104)
44 1xlq_A Putidaredoxin, PDX; [2F 97.2 0.0004 1.4E-08 63.1 5.4 51 13-65 2-54 (106)
45 1uwm_A Ferredoxin VI, FDVI; el 97.1 0.00045 1.5E-08 62.8 5.5 51 13-65 2-54 (106)
46 3hui_A Ferredoxin; cytochrome 97.1 0.00062 2.1E-08 64.1 6.1 52 12-65 22-75 (126)
47 1i7h_A Ferredoxin; 2Fe-2S,elec 97.0 0.00049 1.7E-08 63.1 4.9 50 13-65 3-57 (111)
48 1b9r_A Protein (terpredoxin); 96.8 0.00054 1.9E-08 62.2 2.9 51 13-65 2-54 (105)
49 3tx1_A UDP-N-acetylenolpyruvoy 96.5 0.0044 1.5E-07 67.6 7.9 154 240-421 55-213 (322)
50 3i9v_3 NADH-quinone oxidoreduc 96.3 0.0021 7.2E-08 78.4 4.8 103 13-128 1-126 (783)
51 2y5c_A Adrenodoxin-like protei 96.1 0.0071 2.4E-07 55.1 6.1 50 13-65 7-58 (109)
52 2bt6_A Adrenodoxin 1; rutheniu 96.0 0.0056 1.9E-07 55.7 4.9 49 13-64 8-60 (108)
53 1doi_A 2Fe-2S ferredoxin; halo 96.0 0.0034 1.2E-07 59.2 3.5 49 12-64 28-76 (128)
54 2vfr_A Xylitol oxidase, aldito 95.8 0.0036 1.2E-07 70.8 3.1 102 241-365 22-123 (422)
55 4feh_A Oxidoreductase DPRE1; a 95.7 0.039 1.3E-06 63.4 11.2 155 241-422 44-213 (481)
56 4bby_A Alkyldihydroxyacetoneph 95.4 0.013 4.3E-07 70.1 6.1 109 241-367 207-319 (658)
57 3ah7_A [2Fe-2S]ferredoxin; [2F 95.1 0.026 8.9E-07 51.6 5.9 42 19-65 15-57 (113)
58 1krh_A Benzoate 1,2-dioxygenas 95.1 0.019 6.4E-07 62.6 5.8 48 14-64 4-54 (338)
59 2uuu_A Alkyldihydroxyacetoneph 94.9 0.02 7E-07 67.3 5.5 109 241-367 139-250 (584)
60 3pm9_A Putative oxidoreductase 94.8 0.013 4.3E-07 67.4 3.5 106 241-367 53-161 (476)
61 3i99_A UDP-N-acetylenolpyruvoy 94.5 0.053 1.8E-06 59.8 7.2 103 240-367 31-137 (357)
62 3js8_A Cholesterol oxidase; ch 94.3 0.11 3.8E-06 60.2 9.6 156 240-422 30-216 (540)
63 2pia_A Phthalate dioxygenase r 94.1 0.038 1.3E-06 59.9 4.9 48 14-64 238-285 (321)
64 3n9z_C Adrenodoxin; cytochrome 94.0 0.012 4.1E-07 55.0 0.6 49 13-64 7-59 (123)
65 1f0x_A DLDH, D-lactate dehydro 93.8 0.037 1.3E-06 64.8 4.6 82 241-324 47-133 (571)
66 1e8g_A Vanillyl-alcohol oxidas 93.7 0.054 1.8E-06 63.5 5.7 109 241-367 72-185 (560)
67 1wvf_A 4-cresol dehydrogenase 93.1 0.047 1.6E-06 63.3 3.8 106 241-365 58-167 (520)
68 2i0k_A Oxidoreductase; MIX alp 93.0 0.045 1.5E-06 64.1 3.5 105 241-365 37-148 (561)
69 2exr_A Cytokinin dehydrogenase 92.7 0.093 3.2E-06 60.9 5.4 104 241-366 63-176 (524)
70 1y56_A Hypothetical protein PH 92.1 0.16 5.4E-06 58.3 6.4 70 12-98 14-90 (493)
71 2gqt_A UDP-N-acetylenolpyruvyl 90.9 0.16 5.6E-06 53.7 4.4 141 243-422 25-171 (268)
72 3zyy_X Iron-sulfur cluster bin 90.4 0.26 8.9E-06 58.0 6.0 48 12-64 4-52 (631)
73 3rja_A Carbohydrate oxidase; p 90.3 0.42 1.4E-05 54.7 7.6 84 240-324 37-121 (473)
74 1w1o_A Cytokinin dehydrogenase 90.3 0.12 4.3E-06 60.0 3.2 156 241-422 70-244 (534)
75 3fw9_A Reticuline oxidase; BI- 89.1 0.62 2.1E-05 53.6 7.7 156 240-421 46-214 (495)
76 2bvf_A 6-hydroxy-D-nicotine ox 88.4 0.51 1.8E-05 53.7 6.4 82 240-324 39-120 (459)
77 2y3s_A TAML; oxidoreductase; H 88.4 0.66 2.2E-05 53.8 7.4 82 240-323 59-140 (530)
78 2wdx_A Putative hexose oxidase 87.7 0.75 2.6E-05 53.3 7.2 82 240-323 58-139 (523)
79 2ipi_A Aclacinomycin oxidoredu 87.3 0.77 2.6E-05 53.1 7.0 80 240-323 56-137 (521)
80 3vte_A Tetrahydrocannabinolic 87.1 0.7 2.4E-05 53.4 6.5 83 240-324 54-137 (518)
81 1zr6_A Glucooligosaccharide ox 86.9 0.77 2.6E-05 52.9 6.8 80 241-323 44-124 (503)
82 3pop_A GILR oxidase; FAD bindi 86.9 0.84 2.9E-05 52.6 7.0 82 240-323 35-116 (501)
83 3hrd_B Nicotinate dehydrogenas 83.8 1.8 6.2E-05 47.0 7.4 60 786-845 21-91 (330)
84 2gag_A Heterotetrameric sarcos 82.6 3.3 0.00011 51.5 10.1 83 11-101 20-112 (965)
85 3nvz_C Xanthine dehydrogenase/ 81.1 0.85 2.9E-05 55.2 3.9 74 786-861 444-528 (755)
86 1rm6_A 4-hydroxybenzoyl-COA re 80.3 2.1 7.3E-05 51.8 7.0 73 786-860 457-540 (769)
87 1n62_B Carbon monoxide dehydro 78.4 3.5 0.00012 50.2 8.1 72 788-861 506-588 (809)
88 2w3s_B Xanthine dehydrogenase; 76.9 2.6 8.7E-05 51.2 6.2 72 787-860 465-547 (777)
89 1ffv_B CUTL, molybdoprotein of 76.4 3.2 0.00011 50.6 6.9 71 788-860 500-581 (803)
90 1t3q_B Quinoline 2-oxidoreduct 75.7 3.3 0.00011 50.3 6.8 72 788-861 484-565 (788)
91 1dgj_A Aldehyde oxidoreductase 73.6 5.4 0.00018 49.2 8.0 74 786-861 631-718 (907)
92 3tsh_A Pollen allergen PHL P 4 68.5 7.7 0.00026 44.4 7.3 82 241-324 54-138 (500)
93 3unc_A Xanthine dehydrogenase/ 66.8 3.7 0.00013 52.7 4.5 73 786-860 1014-1097(1332)
94 1vlb_A Aldehyde oxidoreductase 65.3 5.7 0.00019 49.0 5.6 74 786-861 629-716 (907)
95 3zyv_A AOH1; oxidoreductase, m 62.7 4.9 0.00017 51.7 4.6 60 785-844 1018-1088(1335)
96 1tyg_B YJBS; alpha beta barrel 51.0 16 0.00055 31.6 4.5 32 10-45 17-49 (87)
97 2l32_A Small archaeal modifier 49.6 11 0.00037 31.5 3.1 34 12-46 1-34 (74)
98 2kl0_A Putative thiamin biosyn 42.3 25 0.00084 29.2 4.1 61 15-100 2-63 (73)
99 1v2y_A 3300001G02RIK protein; 42.2 14 0.00049 33.0 2.9 32 6-38 2-34 (105)
100 1erd_A Pheromone ER-2; NMR {Eu 38.9 14 0.00048 25.8 1.7 28 109-136 5-32 (40)
101 3kwl_A Uncharacterized protein 38.3 31 0.0011 39.6 5.6 96 21-138 43-172 (514)
102 1rrb_A RAF-1 RBD, RAF proto-on 36.9 18 0.00063 32.3 2.6 44 13-64 20-64 (107)
103 2k5p_A THis protein, thiamine- 33.7 21 0.00072 30.1 2.4 66 14-100 1-67 (78)
104 1ep3_B Dihydroorotate dehydrog 33.2 16 0.00053 37.7 1.8 16 48-63 223-238 (262)
105 3abf_A 4-oxalocrotonate tautom 30.2 19 0.00065 28.2 1.5 31 813-843 24-57 (64)
106 1f0z_A THis protein; ubiquitin 26.0 24 0.00083 28.4 1.4 27 15-45 2-28 (66)
107 2l5b_A Activator of apoptosis 24.2 50 0.0017 22.3 2.3 15 849-863 15-29 (32)
108 4hcn_B Polyubiquitin, ubiquiti 23.7 48 0.0016 28.6 3.0 35 5-40 16-51 (98)
109 1v5t_A 8430435I17RIK protein; 23.4 59 0.002 27.6 3.5 39 8-47 4-43 (90)
110 3ny5_A Serine/threonine-protei 22.3 2.2E+02 0.0074 25.0 6.7 73 12-100 14-87 (96)
111 2opa_A Probable tautomerase YW 20.1 37 0.0013 26.2 1.4 31 812-842 22-55 (61)
No 1
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=100.00 E-value=6.4e-179 Score=1688.56 Aligned_cols=794 Identities=29% Similarity=0.488 Sum_probs=682.7
Q ss_pred CCceeEEEEEECCEEEEEecCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEeecCCCcccCCceeecccccchhh
Q 002932 8 GGTRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCS 87 (864)
Q Consensus 8 ~~~~~~i~~~lNg~~~~~~~~~~~~~Ll~~LR~~~~l~g~K~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~p~~~ 87 (864)
.-.+..|.|+|||+++++++++|++|||+|||++++|||||+||+||+||||||+|+++|+.++++.+++|||||+|+++
T Consensus 4 ~~~~~~l~F~vNG~~v~~~~~~p~~tLl~~LR~~~~ltGTK~gC~EG~CGACtV~v~~~~~~~~~~~~~avNsCl~~l~~ 83 (1335)
T 3zyv_A 4 SKESDELIFFVNGKKVTERNADPEVNLLFYLRKVIRLTGTKYGCGGGDCGACTVMISRYDPISKRISHFSATACLVPICS 83 (1335)
T ss_dssp ---CCCEEEEETTEEEEESSCCTTCBHHHHHHHTTCCTTSCCSCSSSSSCTTEEEEEEEETTTTEEEEEEEETTTCBGGG
T ss_pred CCCCCeEEEEECCEEEEeCCCCcCccHHHHHhccCCCcccccccCCCCCcceEEEEeeEeCCCCeEEEEEhhHHHHHHHH
Confidence 33456799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCceeEEecCCCCCCCCcchHhHHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHHhCCc
Q 002932 88 VNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNL 167 (864)
Q Consensus 88 ~~g~~i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtPG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnl 167 (864)
+||++|+|||||++.+++||||||+|+++|||||||||||||||||+||+|+ +.| |+++|+++|+|||
T Consensus 84 ~~g~~v~TvEglg~~~~~lHpvQ~~~a~~hgsQCGFCTPGfVMSmyall~~~-----~~p-------t~~~ie~al~GNL 151 (1335)
T 3zyv_A 84 LHGAAVTTVEGIGSTKTRIHPVQERIAKGHGTQCGFCTPGMVMSIYTLLRNH-----PEP-------STEQIMETLGGNL 151 (1335)
T ss_dssp CTTCEEECHHHHCCTTSCCCHHHHHHHHTTCCSSCTTHHHHHHHHHHHHHHC-----SSC-------CHHHHHHHHTTCC
T ss_pred hcCCEEEeeCCCCCCCCCCCHHHHHHHhcCCCcCCCCCcHHHHHHHHHHHcC-----CCC-------CHHHHHHHhCCcc
Confidence 9999999999999888899999999999999999999999999999999764 555 6999999999999
Q ss_pred cccCCChhHHHHHHHhhhcccccccC--CCcccccCCc----------ccccccCCCCCCCCCcccCCCcccccc----c
Q 002932 168 CRCTGYRPIADACKSFAADVDIEDLG--INSFWAKGES----------KEVKISRLPPYKHNGELCRFPLFLKKE----N 231 (864)
Q Consensus 168 CRCtgy~~i~~a~~~~~~~~~~~~~~--~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~p~~l~~~----~ 231 (864)
|||||||||+||+|+|+.+.++++.+ ..||...... +.....++++++++++ ++|||+|... .
T Consensus 152 CRCTGYRPIldA~ksfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~e-~ifppel~~~~~~~~ 230 (1335)
T 3zyv_A 152 CRCTGYRPIVESAKSFCPSSTCCQMNGEGKCCLDEEKNEPERKNSVCTKLYEKKEFQPLDPTQE-LIFPPELMRMAEESQ 230 (1335)
T ss_dssp CSSSCSHHHHHHHHTTCC-----------------------------CCSSCGGGSCCCCGGGS-CCCCHHHHHHHC--C
T ss_pred cccCCCHHHHHHHHHhhccCccccccCCCcccccccccCcccccccccccccccccCCCCcccc-ccCCHHHHhhhhccc
Confidence 99999999999999999887665542 1333222111 0123456788998875 5999998642 2
Q ss_pred CcceeecC-CceEEecCCHHHHHHHHhhhcCCCCCcceEEccCccceEeee--cccCceeeeCCCCccccceEecCCcEE
Q 002932 232 SSAMLLDV-KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKE--VEHYDKYIDIRYIPELSVIRRDQTGIE 308 (864)
Q Consensus 232 ~~~~~~~~-~~~~~~P~tl~eal~ll~~~~~~~~~~a~lvaGgTdl~v~k~--~~~~~~lIdl~~I~EL~~I~~~~~~l~ 308 (864)
...+.+.+ +.+||+|+||+|+++|++ ++|+++||+|||+++++.. ...++.+||+++|+||+.|+.++++|+
T Consensus 231 ~~~l~~~g~~~~w~~P~tl~el~~l~~-----~~p~a~lvaGnT~~gl~~~~~~~~~~~~I~~~~v~EL~~i~~~~~~l~ 305 (1335)
T 3zyv_A 231 NTVLTFRGERTTWIAPGTLNDLLELKM-----KHPSAPLVIGNTYLGLHMKFTDVSYPIIISPARILELFVVTNTKQGLT 305 (1335)
T ss_dssp CCCEEEECSSCEEEECSSHHHHHHHHH-----HCTTSCBCSSCTTHHHHHC--CCCCSEEECCTTCGGGSCEECCTTEEE
T ss_pred cceeeecCCCceEecCCCHHHHHHHHH-----HCCCCeEEEecccceeeEeecCCCCCeEEEcCcchhHheEEecCCEEE
Confidence 34577777 889999999999999999 4799999999999999532 267899999999999999999999999
Q ss_pred ecccccHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHhccccccCCcccCCccccccCCCCCCchHHHHHhcCcEEEEE
Q 002932 309 IGATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIM 388 (864)
Q Consensus 309 IGA~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~f~sD~~p~LlaldA~v~l~ 388 (864)
|||+|||+++++.|++.+++++++.+++||.|.+++++|||+||||+||||||||++||+ ||++|+|+|+||+|+|.
T Consensus 306 IGA~vtls~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~fAs~qIRN~aTigGNI~~asPi---sD~~p~L~A~~A~l~l~ 382 (1335)
T 3zyv_A 306 LGTGLSLTQVKNVLSDVVSRLPKEKTQIYCALLKQLKTLAGQQIRNVASLGGHIISRLPT---SDLNPILGIGNCILNVA 382 (1335)
T ss_dssp EETTCBHHHHHHHHHHHHTTSCTTTCTTHHHHHHHHTTSSCHHHHHHCBHHHHHHTCCTT---CSSHHHHGGGTCEEEEE
T ss_pred EcccCcHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHhcchhhcCcccccCceeccCCc---chHHHHHHhhCCEEEEe
Confidence 999999999999999888888888889999999999999999999999999999999999 99999999999999999
Q ss_pred eCCeeEEEehhhhh-c---CCCCCCCceEEEEEcCCCCccCCcccCCCcceEEEEEEeccCCCCCccceeeeeEEEEEcC
Q 002932 389 TGQKCEKLMLEEFL-E---RPPLDSRSILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSP 464 (864)
Q Consensus 389 s~~g~R~vpl~dF~-~---~~~l~~~Eii~~I~iP~~~~~~~~~~~~~~~~~~~~~K~~~R~~~~dia~v~~A~~v~~~~ 464 (864)
+.+|.|++|++||| . ++.|+++|||.+|+||.+.+ ..+|++||+++| +++|||+||+||++.+++
T Consensus 383 ~~~g~r~i~l~d~F~~gyrk~~l~~~eil~si~iP~~~~----------~~~~~~yK~s~R-~d~dia~Vnaa~~v~l~~ 451 (1335)
T 3zyv_A 383 STEGIQQIPLNDHFLAGVPDAILKPEQVLISVFVPRSSK----------WEFVSAFRQAPR-QQNAFATVNAGMKVVFKE 451 (1335)
T ss_dssp CSSCEEEEECCTTTSCC----CCCTTCEEEEEEEECCCT----------TEEEEEEEECSS-SSSSCCSEEEEEEEEC--
T ss_pred cCCceEEEechHhhhhcccccccCCCcEEEEeeccCCch----------hhhhhheeeccc-cccchhhheeeeeEEEec
Confidence 99999999998854 3 57899999999999999876 678899999999 899999999999999975
Q ss_pred CCCCCCceeeeeEEEEcccCCCcceeHHHHHHHHcCCCCCHHHHHHHHHHHhhcCCCCCCC--CCHHHHhHHHHHHHHHH
Q 002932 465 CKTGDGIRVNNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGT--SIPAYRSSLAVGFLYEF 542 (864)
Q Consensus 465 ~~~~~~~~i~~~ria~Ggv~~~~p~ra~~~E~~L~Gk~l~~~~l~~a~~~l~~e~~p~~~~--~sa~YRr~la~~L~~r~ 542 (864)
+ +++|+++||+||||+++ |+|++++|++|+||+|+++++++|++.|.+++.|..+. +|++||+.||.+||+||
T Consensus 452 ~----~~~v~~~~iafGGma~~-~~rA~~te~~L~Gk~~~~~~l~~A~~~L~~e~~p~~~~~g~~~~YR~~la~~ll~kf 526 (1335)
T 3zyv_A 452 D----TNTITDLGILYGGIGAT-VISADKSCRQLIGRCWDEEMLDDAGKMICEEVSLLMAAPGGMEEYRKTLAISFLFMF 526 (1335)
T ss_dssp ------CBCSEEEEEEESSSSS-CC---CTTGGGTTCBC---CHHHHHHHHHHHHHHC--CTTCCHHHHHHHHHHHHHHH
T ss_pred C----CCeEeEEEEEEecCcCc-cccHHHHHHHhcCCCCCHHHHHHHHHHHHhhcCCCcCCCCccHHHHHHHHHHHHHHH
Confidence 2 47999999999999999 99999999999999999999999999999999887664 58999999999999999
Q ss_pred HHHHhhhhcCCCccccCCCCCCCCccccccccccccccccccccccCccccccccC----cCCcCCCCcccccccccccc
Q 002932 543 FGSLTEMKNGISRDWLCGYSNNVSLKDSHVQQNHKQFDESKVPTLLSSAEQVVQLS----REYYPVGEPITKSGAALQAS 618 (864)
Q Consensus 543 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~g~q~~~~~----~~~~~vG~~~~r~d~~~kvt 618 (864)
|+++..+++...+. ..+ +.+ .... +....+++++++|.|.|+.. +.+++||||++|+|+..|||
T Consensus 527 ~l~~~~~~~~~~~~---~~~---~~~-----~~~~-~~~~~~~~~~~~~~q~~~~~~~~~~~~~~IGk~v~R~d~~~kvt 594 (1335)
T 3zyv_A 527 YLDVLKQLKTRDPH---KYP---DIS-----QKLL-HILEDFPLTMPYGMQSFQDVDFQQPLQDPIGRPIMHQSGIKHAT 594 (1335)
T ss_dssp HHHHHHHHHHHC------------CC-----HHHH-GGGCCCCCC---CCEECCCCCTTSCTTCCTTSCCCCTTHHHHHH
T ss_pred HHHHHHhhcccccc---cCC---Ccc-----hhhc-ccccccCCCCCCcccccccccccCCCCCCCCCCCcCcChHHHCC
Confidence 99998876421110 000 000 0111 13567899999999999764 45678999999999999999
Q ss_pred cceeccccCCCCCCceEEEEEecCCcCceeccCCCCcCCCCCCEEEEEEcCCCCCCCCCCCCcccCCCcccccCCceeec
Q 002932 619 GEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCA 698 (864)
Q Consensus 619 G~a~Y~~Di~~~~gmL~a~ivrSp~a~a~I~~ID~s~A~~~pGVv~vvt~~Dip~~g~n~~~~~~~~~~p~~a~~~V~y~ 698 (864)
|+++|++|++.+|||||+++||||++||+|++||+++|++||||++|+|++|+| +.|. ..++|+|++++|+|+
T Consensus 595 G~a~Y~~Di~~~pgmL~a~~vrSp~aharI~sID~s~A~~~pGV~aV~T~~DiP--~~~~-----~~~~~~la~d~Vr~~ 667 (1335)
T 3zyv_A 595 GEAVFCDDMSVLPGELFLAVVTSSKSHAKIISLDASEALASLGVVDVVTARDVP--GDNG-----REEESLYAQDEVICV 667 (1335)
T ss_dssp TCCCCSTTSCCCTTCEEEEEEECSSSSEEEEEEECHHHHHSTTEEEEECGGGCS--SCCC-------CCCSSCCSEECST
T ss_pred CcccccccCCCCCCCEEEEEEeCCCCCeEEEEEEhHHHhcCCCeEEEEehhhcC--CcCC-----CCCcccCCCCeEEEc
Confidence 999999999756999999999999999999999999999999999999999999 5443 368999999999999
Q ss_pred CCcEEEEEeCCHHHHHHhcccceEEEecCCCCCccCCHHHHHhcCCCccCCCccccCCCCChhhhcccCCEEEEEEEEEE
Q 002932 699 GQPVAFVVADSQKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAAEIKL 778 (864)
Q Consensus 699 GqpVa~VvAet~~~A~~Aa~~V~V~y~~e~l~p~v~~~~~Al~~~~~~~~~~~~~~~~~Gd~~~a~~~a~~vvve~~~~~ 778 (864)
|||||+|||+|+++|++|+++|+|+| |+++|.+.++++|++.+++...+ .....||++++|++||++ ||++|++
T Consensus 668 Gq~VA~VvAet~~~A~~Aa~~V~VeY--e~l~P~v~~~~~a~~~~~~~~~~---~~~~~Gd~~~af~~a~~v-ve~~y~~ 741 (1335)
T 3zyv_A 668 GQIVCAVAADSYAHAQQAAKKVKIVY--QDIEPMIVTVQDALQYESFIGPE---RKLEQGNVEEAFQCADQI-LEGEVHL 741 (1335)
T ss_dssp TCEEEEEEESSHHHHHHHHTTCEEEE--EECSCCCCSHHHHHHTTCCEEEE---EEEEESCHHHHTTSSSEE-EEEEEEE
T ss_pred CCEEEEEEECCHHHHHHHhcCCeEEE--EeCCCccCCHHHHhhcccccCcc---ccccCCCHHHHHhhCCeE-EEEEEEE
Confidence 99999999999999999999999999 78866788999999987653211 135789999999999996 9999999
Q ss_pred CccccCCCCCCeEEEEEC-CCCcEEEEeCCCChHHHHHHHHHHhCCCCCCEEEEeCCcCCCCCCCCCCChHHHHHHHHHH
Q 002932 779 GSQYYFYMETQTALAVPD-EDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGKAIKAMPFNIVGATIE 857 (864)
Q Consensus 779 ~~q~H~~mEp~~a~A~~~-~dg~l~V~~stQ~p~~~r~~vA~~Lglp~~kV~V~~~~~GGgFGgK~~~~~~~~~~aAlaA 857 (864)
++|+|+||||++++|+|+ +||+|+||+|||+|+.+|..||++||||++||||+++++|||||+|.+....++++||+||
T Consensus 742 ~~~~h~~mEp~~~~a~~~~edg~l~v~~sTQ~p~~~r~~lA~~Lglp~~kVrV~~~~vGGGFG~K~~~~~~~~~~aAlaA 821 (1335)
T 3zyv_A 742 GGQEHFYMETQSVRVVPKGEDKEMDIYVSSQDAAFTQEMVARTLGIPKNRINCHVKRVGGAFGGKASKPGLLASVAAVAA 821 (1335)
T ss_dssp CCBCCCCSSCCEEEEEECSSTTCEEEEECCSCHHHHHHHHHHHHTCCGGGEEEEESCCSCCTTTTSSHHHHHHHHHHHHH
T ss_pred CceeccccCCcceEEEEECCCCeEEEEECCcCHHHHHHHHHHHHCCCCceEEEEeCCccCCCCccccCchHHHHHHHHHH
Confidence 999999999999999998 5678999999999999999999999999999999999999999999986566788899999
Q ss_pred HHcCCC
Q 002932 858 LLTVYR 863 (864)
Q Consensus 858 ~~t~~~ 863 (864)
+++|||
T Consensus 822 ~~~gRP 827 (1335)
T 3zyv_A 822 QKTGRP 827 (1335)
T ss_dssp HHHCSC
T ss_pred HHhCCC
Confidence 999998
No 2
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=100.00 E-value=1.5e-172 Score=1620.85 Aligned_cols=791 Identities=30% Similarity=0.525 Sum_probs=694.0
Q ss_pred EEEEEECCEEEEEecCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEeecCCCcccCCceeecccccchhhccCce
Q 002932 13 SVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCL 92 (864)
Q Consensus 13 ~i~~~lNg~~~~~~~~~~~~~Ll~~LR~~~~l~g~K~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~p~~~~~g~~ 92 (864)
.|+|+|||+++++.+++|+++||+|||+++||||||+||++|+||||||+|+++|+.+++++|++|||||+|+++++|++
T Consensus 5 ~i~~~vNg~~~~~~~~~p~~~ll~~LR~~~~ltgtk~gC~~g~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~ 84 (1332)
T 3unc_A 5 ELVFFVNGKKVVEKNADPETTLLAYLRRKLGLRGTKLGCGEGGCGACTVMLSKYDRLQDKIIHFSANACLAPICTLHHVA 84 (1332)
T ss_dssp CEEEEETTEEEEETTCCTTCBHHHHHHHTSCCTTSCCSCSSSSSCTTEEEEEEEETTTTEEEEEEEETTTCBGGGCTTCE
T ss_pred cEEEEECCEEEEeecCCCCCCHHHHHhhhcCCCCcCCCcCCCCCCCcEEEEecccccccccCCeEeehHHhhHHHhCCCE
Confidence 69999999999986699999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCCCCCCCcchHhHHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHHhCCccccCC
Q 002932 93 ITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTG 172 (864)
Q Consensus 93 i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtPG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRCtg 172 (864)
|+|||||++.++.|||||+||+++|++|||||||||||++|+||+++ |.| |++||+++|+||||||||
T Consensus 85 i~TiEgl~~~~~~~hpvq~a~~~~~~~QCG~CtpG~vms~~~ll~~~-----~~p-------~~~~i~~~l~gnlCRCtg 152 (1332)
T 3unc_A 85 VTTVEGIGSTKTRLHPVQERIAKSHGSQCGFCTPGIVMSMYTLLRNQ-----PEP-------TVEEIEDAFQGNLCRCTG 152 (1332)
T ss_dssp EECGGGTCCTTSCCCHHHHHHHHTTCCSSCTTHHHHHHHHHHHHHHC-----SSC-------CHHHHHHTTTTCCCSSSC
T ss_pred EEEeccccCCCCCcCHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhc-----CCC-------CHHHHHHHHhCCcccCCC
Confidence 99999998755689999999999999999999999999999999653 555 699999999999999999
Q ss_pred ChhHHHHHHHhhhccccc---ccCCCcccccCCcc-------cccccCCCCCCCCCcccCCCcccc---cccCcceeecC
Q 002932 173 YRPIADACKSFAADVDIE---DLGINSFWAKGESK-------EVKISRLPPYKHNGELCRFPLFLK---KENSSAMLLDV 239 (864)
Q Consensus 173 y~~i~~a~~~~~~~~~~~---~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~p~~l~---~~~~~~~~~~~ 239 (864)
|++|++|++.++.+.++| +.|.+||+++.+++ -+..++|++|+++++ +||||+|+ .....++.+.+
T Consensus 153 y~~i~~a~~~~~~~~~~c~~~~~g~~cc~~~~~~~~~~~~~~~~~~~~~~~~d~~~e-~ifpp~L~~~~~~~~~~l~~~~ 231 (1332)
T 3unc_A 153 YRPILQGFRTFAKNGGCCGGNGNNPNCCMNQKKDHTVTLSPSLFNPEEFMPLDPTQE-PIFPPELLRLKDVPPKQLRFEG 231 (1332)
T ss_dssp SHHHHHHHGGGC----------------------------CCSCCGGGSCCCCGGGS-CCCCHHHHHHTTSCCCCEEEEC
T ss_pred chhHHHHHHHHhhcCCcccccccCCccccccccccccccccccccccccCCCCcccc-ccCCHHHhhhccccCCceEecC
Confidence 999999999999876554 23456776543221 124466889999864 59999997 23445677877
Q ss_pred -CceEEecCCHHHHHHHHhhhcCCCCCcceEEccCccceEe-eec-ccCceeeeCCCCccccceEecCCcEEecccccHH
Q 002932 240 -KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYY-KEV-EHYDKYIDIRYIPELSVIRRDQTGIEIGATVTIS 316 (864)
Q Consensus 240 -~~~~~~P~tl~eal~ll~~~~~~~~~~a~lvaGgTdl~v~-k~~-~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~ 316 (864)
+++|++|+||+||++||++ ++++++|||||+|+++ |.+ ..++.+|||++|+||+.|+.++++|+|||+|||+
T Consensus 232 ~~~~~~~P~sl~ea~~ll~~-----~~~a~lvaGgT~l~~~~k~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vtl~ 306 (1332)
T 3unc_A 232 ERVTWIQASTLKELLDLKAQ-----HPEAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHGPEGISFGAACALS 306 (1332)
T ss_dssp SSCEEEECCSHHHHHHHHHH-----CTTCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEECSSEEEEETTCBHH
T ss_pred CceEEEccCCHHHHHHHHhh-----CCCCEEEEeCcHHHHHhhcCCCCCCeEEEcCCCHHhCceEEeCCEEEEEecChHH
Confidence 8999999999999999994 6899999999999994 443 6789999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhhhhhhhHHHHHHHHHHhccccccCCcccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCeeEEE
Q 002932 317 KAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKL 396 (864)
Q Consensus 317 ~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~f~sD~~p~LlaldA~v~l~s~~g~R~v 396 (864)
+|++.+++.+.+++++..+.+|.|.+++++|||+||||+||||||||+++|. ||++|+|+||||+|+|.+.+|+|+|
T Consensus 307 ~l~~~l~~~~~~~~~~~~~~~p~L~~a~~~ias~qIRN~aTiGGNI~~asp~---sD~~~~LlAl~A~v~l~~~~G~R~i 383 (1332)
T 3unc_A 307 SVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITASPI---SDLNPVFMASGTKLTIVSRGTRRTV 383 (1332)
T ss_dssp HHHHHHHHHHHHSCGGGCHHHHHHHHHHHTSSCHHHHHHCBHHHHHHHCCTT---CSSHHHHHHTTCEEEEEETTEEEEE
T ss_pred HHHHHHHHHhhhccccccchhHHHHHHHHHhCCHHHhceeeccceecccCCc---hhHHHHHHHcCCEEEEEeCCCcEEE
Confidence 9999987766666666778899999999999999999999999999999998 9999999999999999999999999
Q ss_pred ehhh-hhc---CCCCCCCceEEEEEcCCCCccCCcccCCCcceEEEEEEeccCCCCCccceeeeeEEEEEcCCCCCCCce
Q 002932 397 MLEE-FLE---RPPLDSRSILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIR 472 (864)
Q Consensus 397 pl~d-F~~---~~~l~~~Eii~~I~iP~~~~~~~~~~~~~~~~~~~~~K~~~R~~~~dia~v~~A~~v~~~~~~~~~~~~ 472 (864)
|++| ||. ++.|.++|||++|+||.+.. +.++.+||+++| +++|||+||+|+.++++++ +++
T Consensus 384 pl~d~Ff~g~~~t~L~~~Eil~~I~iP~~~~----------~~~~~~~K~~~R-~~~d~A~V~~A~~v~~~~~----~~~ 448 (1332)
T 3unc_A 384 PMDHTFFPSYRKTLLGPEEILLSIEIPYSRE----------DEFFSAFKQASR-REDDIAKVTCGMRVLFQPG----SMQ 448 (1332)
T ss_dssp ECCGGGCCSTTCCSCCTTCEEEEEEEECCCT----------TEEEEEEEECSS-SSSCCCSEEEEEEEEESTT----SSB
T ss_pred EhHHhhhhccccccCCCCcEEEEEEecCCCC----------CcceEEEEEecC-CCCCcceEEEEEEEEEcCC----CCe
Confidence 9999 997 68999999999999998865 466788999999 8999999999999999741 379
Q ss_pred eeeeEEEEcccCCCcceeHHHHHHHHcCCCCCHHHHHHHHHHHhhcCC-CCCCC-CCHHHHhHHHHHHHHHHHHHHhhhh
Q 002932 473 VNNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVV-PEDGT-SIPAYRSSLAVGFLYEFFGSLTEMK 550 (864)
Q Consensus 473 i~~~ria~Ggv~~~~p~ra~~~E~~L~Gk~l~~~~l~~a~~~l~~e~~-p~~~~-~sa~YRr~la~~L~~r~l~~~~~~~ 550 (864)
|+++||+||||+++ |+|++++|++|.||+|+++++++|++.+.+++. |.++. +|++||++|+.+||+|||+++.+++
T Consensus 449 i~~~rIa~Ggva~~-p~ra~~~E~~L~Gk~~~~~~l~~A~~~l~~~~~~~~~d~~gs~eYR~~La~~ll~r~l~~v~~~~ 527 (1332)
T 3unc_A 449 VKELALCYGGMADR-TISALKTTQKQLSKFWNEKLLQDVCAGLAEELSLSPDAPGGMIEFRRTLTLSFFFKFYLTVLKKL 527 (1332)
T ss_dssp EEEEEEEEESSSSS-CEECHHHHHTTTTCBSSHHHHHHHHHHHHHHTCCCTTCTTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEECCCCc-cccHHHHHHHhcCCCCcHHHHHHHHHHHHhhCCCCcccccCCHHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999 999999999999999999999999999999996 56655 6999999999999999999999887
Q ss_pred cCCCccccCCCCCCCCccccccccccccccccccccccCccccccc----cCcCCcCCCCcccccccccccccceecccc
Q 002932 551 NGISRDWLCGYSNNVSLKDSHVQQNHKQFDESKVPTLLSSAEQVVQ----LSREYYPVGEPITKSGAALQASGEAIYVDD 626 (864)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~g~q~~~----~~~~~~~vG~~~~r~d~~~kvtG~a~Y~~D 626 (864)
+.. +.. +.+.+++ ... ++...++||+|+|.|.|+ +.+++++|||+++|+|+..||||+++|++|
T Consensus 528 ~~~-~~~--~~~~~~~--------~~~-s~~~~~~~~~~~g~q~~~~~~~~~~~~~~iG~~v~R~d~~~kvtG~a~Y~~D 595 (1332)
T 3unc_A 528 GKD-SKD--KCGKLDP--------TYT-SATLLFQKDPPANIQLFQEVPNGQSKEDTVGRPLPHLAAAMQASGEAVYCDD 595 (1332)
T ss_dssp CC-----------CCT--------TTG-GGGCCCCCCCCEEEEECCCCCTTCCTTCCTTSCCCCTTHHHHHHTCSCCGGG
T ss_pred ccc-ccc--ccCCCCh--------hhc-cccccccCCCCCceeeeecccccccccCcCCCCCcCcchHHhcccccccccc
Confidence 431 000 0000111 111 135678999999999998 457889999999999999999999999999
Q ss_pred CCCCCCceEEEEEecCCcCceeccCCCCcCCCCCCEEEEEEcCCCCCCCCCCCCcccCCCcccccCCceeecCCcEEEEE
Q 002932 627 IPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVV 706 (864)
Q Consensus 627 i~~~~gmL~a~ivrSp~a~a~I~~ID~s~A~~~pGVv~vvt~~Dip~~g~n~~~~~~~~~~p~~a~~~V~y~GqpVa~Vv 706 (864)
++.+|||||+++||||++||+|++||+++|++||||++|+|++|+| +.|.. . ...++|+|++++|+|+|||||+||
T Consensus 596 i~~~pgmL~a~~vrSp~aha~I~sID~s~A~~~pGV~~V~t~~Dip--~~~~~-g-~~~d~~~la~~~Vry~GqpVa~Vv 671 (1332)
T 3unc_A 596 IPRYENELFLRLVTSTRAHAKIKSIDVSEAQKVPGFVCFLSADDIP--GSNET-G-LFNDETVFAKDTVTCVGHIIGAVV 671 (1332)
T ss_dssp SCCBTTCEEEEEEECSSSSEEEEEEECTTGGGSTTEEEEECGGGCS--SCSEE-S-TTSCEESSCCSEECSTTCEEEEEE
T ss_pred cCCCCCcEEEEEEeCCCCCeeEeeechHHHhcCCCEEEEEeccccC--CcccC-C-CCCCcccccCceEEEcCCeEEEEE
Confidence 9745899999999999999999999999999999999999999999 55531 1 346899999999999999999999
Q ss_pred eCCHHHHHHhcccceEEEecCCCCCccCCHHHHHhcCCCccCCCccccCCCCChhhhcccCCEEEEEEEEEECccccCCC
Q 002932 707 ADSQKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAAEIKLGSQYYFYM 786 (864)
Q Consensus 707 Aet~~~A~~Aa~~V~V~y~~e~l~p~v~~~~~Al~~~~~~~~~~~~~~~~~Gd~~~a~~~a~~vvve~~~~~~~q~H~~m 786 (864)
|+|+|+|++|+++|+|+| |++ |+++|+++|+++++++... .....||++++|++|+++ ||++|++++|+|+||
T Consensus 672 A~t~~~A~~Aa~~v~Vey--e~l-p~v~~~~~A~~~~~~~~~~---~~~~~Gd~~~afa~A~~v-ve~~y~~~~~~H~~m 744 (1332)
T 3unc_A 672 ADTPEHAERAAHVVKVTY--EDL-PAIITIEDAIKNNSFYGSE---LKIEKGDLKKGFSEADNV-VSGELYIGGQDHFYL 744 (1332)
T ss_dssp ESSHHHHHHHHHTCEEEE--EEC-CCCCSHHHHHHTTCEEEEE---EEEEESCHHHHHHHCSEE-EEEEEEECCBCCCCS
T ss_pred ECCHHHHHHHhhcCceEE--EcC-CCcCCHHHHhhccCccCCc---cccccCCHhHHhhcCCeE-eeeeEEeCCccccCC
Confidence 999999999999999999 888 8999999999988653211 135789999999999996 999999999999999
Q ss_pred CCCeEEEEEC-CCCcEEEEeCCCChHHHHHHHHHHhCCCCCCEEEEeCCcCCCCCCCCCCChHHHHHHHHHHHHcCCC
Q 002932 787 ETQTALAVPD-EDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGKAIKAMPFNIVGATIELLTVYR 863 (864)
Q Consensus 787 Ep~~a~A~~~-~dg~l~V~~stQ~p~~~r~~vA~~Lglp~~kV~V~~~~~GGgFGgK~~~~~~~~~~aAlaA~~t~~~ 863 (864)
||++|+|+|+ ++|+|+||+|||+|+.+|..||++||||++||||+++++|||||+|.+....++++||++|+++|||
T Consensus 745 Ep~~~~A~~~~~~g~l~v~~sTQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFG~K~~~~~~~~~~aAlaA~~~gRP 822 (1332)
T 3unc_A 745 ETHCTIAIPKGEEGEMELFVSTQNAMKTQSFVAKMLGVPVNRILVRVKRMGGGFGGKETRSTLVSVAVALAAYKTGHP 822 (1332)
T ss_dssp SCCEEEEEECSSTTCEEEEECCSCHHHHHHHHHHHHTCCGGGEEEEECCCSCCTTTTSSTTHHHHHHHHHHHHHHSSC
T ss_pred CCceEEEEEeCCCCeEEEEECCCCHHHHHHHHHHHhCCCchhEEEEeCCCCCCCCCCCcccchHHHHHHHHHHHhCCC
Confidence 9999999998 6778999999999999999999999999999999999999999999986556788899999999998
No 3
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=100.00 E-value=1.5e-104 Score=908.72 Aligned_cols=444 Identities=27% Similarity=0.451 Sum_probs=393.1
Q ss_pred eEEEEEECCEEEEEecCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEeecCCCcccCCceeecccccchhhccCc
Q 002932 12 HSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGC 91 (864)
Q Consensus 12 ~~i~~~lNg~~~~~~~~~~~~~Ll~~LR~~~~l~g~K~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~p~~~~~g~ 91 (864)
|+|+|+|||+.+++++++|+++|||||| +++|||||.||++|+||||||+|+++| ||++||||++|+.+++|+
T Consensus 1 ~~~~~~vNg~~~~~~~~~~~~~Ll~~Lr-~~~l~g~k~gC~~G~CGaCtV~v~~~~------~g~~v~sCl~~~~~~~g~ 73 (462)
T 2w3s_A 1 MEIAFLLNGETRRVRIEDPTQSLLEWLR-AEGLTGTKEGCNEGDCGACTVMIRDAA------GSRAVNACLMMLPQIAGK 73 (462)
T ss_dssp CEEEEEETTEEEEEECSCTTCBHHHHHH-HTTCTTSCCSCSSSSSCTTEEEEEETT------EEEEEETTTCBGGGGTTC
T ss_pred CcEEEEECCEEEEEecCCCCCcHHHHHH-HcCCCccCCCCCCCCcCCcEEEEEecC------CCeEEEchhhhHHHhCCC
Confidence 5799999999999955899999999999 999999999999999999999999887 689999999999999999
Q ss_pred eeEEecCCCCCCCCcchHhHHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHHhCCccccC
Q 002932 92 LITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCT 171 (864)
Q Consensus 92 ~i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtPG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRCt 171 (864)
+|+|||||++.++.+||||+||+++|++|||||||||||++++|| + | |++||+++|+|||||||
T Consensus 74 ~i~TiEgl~~~~~~~~~~q~a~~~~~~~QCG~CtpG~im~~~~ll-~--------p-------~~~~i~~~l~gnlCRCt 137 (462)
T 2w3s_A 74 ALRTIEGIAAPDGRLHPVQQAMIDHHGSQCGFCTPGFIVSMAAAH-D--------R-------DRKDYDDLLAGNLCRCT 137 (462)
T ss_dssp EEECGGGTSCTTSCCCHHHHHHHHTTCCSSCTTHHHHHHHHHHHH-H--------T-------TCCCHHHHSTTCCCSSS
T ss_pred cEEEECCCCCCCCCCCHHHHHHHHhCCCCCCCCcchHHHHHHHHH-C--------C-------CHHHHHHHHcCCcccCC
Confidence 999999998645789999999999999999999999999999999 2 2 57899999999999999
Q ss_pred CChhHHHHHHHhhhcccccccCCCcccccCCcccccccCCCCCCCCCcccCCCcccccccCcceee--cC-CceEEecCC
Q 002932 172 GYRPIADACKSFAADVDIEDLGINSFWAKGESKEVKISRLPPYKHNGELCRFPLFLKKENSSAMLL--DV-KGSWHSPIS 248 (864)
Q Consensus 172 gy~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~--~~-~~~~~~P~t 248 (864)
||++|++|++.++......++ ..+..+ + ...+.+ .+ ...|++|+|
T Consensus 138 gy~~i~~a~~~~~~~~~~~~~-------------~~~~~~------~-------------~~~~~~~~gG~a~~y~~P~s 185 (462)
T 2w3s_A 138 GYAPILRAAEAAAGEPPADWL-------------QADAAF------T-------------LAQLSSGVRGQTAPAFLPET 185 (462)
T ss_dssp CSHHHHHHHHHHHTSCCCHHH-------------HHGGGC------C--------------------------CCBCCSS
T ss_pred CcHHHHHHHHHHhhccccccc-------------cCcccc------c-------------ccceeEcCCCCccEEEecCC
Confidence 999999999998731100000 000000 0 011222 13 358999999
Q ss_pred HHHHHHHHhhhcCCCCCcceEEccCccceE-eeec-ccCceeeeCCCCccccceEecCCcEEecccccHHHHHHHHHHHh
Q 002932 249 VQELRNVLESVEGSNQISSKLVAGNTGMGY-YKEV-EHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIEALKEET 326 (864)
Q Consensus 249 l~eal~ll~~~~~~~~~~a~lvaGgTdl~v-~k~~-~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~~~l~~~~ 326 (864)
++||++++++ .+++++++|||+|++ +|.+ ..++.+|||++|+||+.|+.++++|+|||+||+++|++.+++
T Consensus 186 l~ea~~ll~~-----~~~a~ilaGGT~L~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vtl~~l~~~l~~-- 258 (462)
T 2w3s_A 186 SDALADWYLA-----HPEATLIAGGTDVSLWVTKALRDLPEVAFLSHCKDLAQIRETPDGYGIGAGVTIAALRAFAEG-- 258 (462)
T ss_dssp HHHHHHHHHH-----CTTCEEESSCTTTTHHHHTSCCCCCSEEECTTCGGGSCEEEETTEEEEETTCBHHHHHHHHTT--
T ss_pred HHHHHHHHhh-----CCCCEEEeCCchhhhhhhccCCCCCEEEEcCCChhhCcEEEcCCEEEEccCCcHHHHHHHHHH--
Confidence 9999999984 578999999999999 4544 578999999999999999999999999999999999987432
Q ss_pred hhhhhhhhhhHHHHHHHHHHhccccccCCcccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCeeEEEehhhhhc---
Q 002932 327 KEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEEFLE--- 403 (864)
Q Consensus 327 ~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~f~sD~~p~LlaldA~v~l~s~~g~R~vpl~dF~~--- 403 (864)
.+|.|+++++++||+||||+|||||||++++|. ||++++|+||||+|+|.+.+|.|++|++|||.
T Consensus 259 ---------~~p~L~~a~~~ia~~qIRN~gTvGGNl~~~sp~---sD~~~~L~ALdA~v~l~~~~G~R~vp~~dF~~g~~ 326 (462)
T 2w3s_A 259 ---------PHPALAGLLRRFASEQVRQVATIGGNIANGSPI---GDGPPALIAMGASLTLRRGQERRRMPLEDFFLEYR 326 (462)
T ss_dssp ---------TCHHHHHHHTTSSCHHHHTTCBHHHHHHHTCTT---CSHHHHHHHTTCEEEEEBTTBCCCCBGGGGEEETT
T ss_pred ---------HhHHHHHHHHHhCChhheeeEEcccccccCCCc---chHHHHHHHcCCEEEEEeCCceEEEEHHHhhcccc
Confidence 589999999999999999999999999999998 99999999999999999999999999999997
Q ss_pred CCCCCCCceEEEEEcCCCCccCCcccCCCcceEEEEEEeccCCCCCccceeeeeEEEEEcCCCCCCCceeeeeEEEEccc
Q 002932 404 RPPLDSRSILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFGAF 483 (864)
Q Consensus 404 ~~~l~~~Eii~~I~iP~~~~~~~~~~~~~~~~~~~~~K~~~R~~~~dia~v~~A~~v~~~~~~~~~~~~i~~~ria~Ggv 483 (864)
++.|+++|||++|+||.+.. . +.+||+++| +++|||+||+|+.++++ +++|+++||+|||+
T Consensus 327 ~t~L~~~Eii~~i~iP~~~~----------~--~~~~K~~~R-~~~d~a~v~~A~~~~~~------~~~i~~~ria~Ggv 387 (462)
T 2w3s_A 327 KQDRRPGEFVESVTLPKSAP----------G--LRCYKLSKR-FDQDISAVCGCLNLTLK------GSKIETARIAFGGM 387 (462)
T ss_dssp EESCCTTCEEEEEEEESCCS----------S--EEEEEECSS-SSSCCCSEEEEEEEEEE------TTEEEEEEEEEESS
T ss_pred cccCCCCcEEEEEEEecCCC----------C--ceEEEEccc-cccchhheeEEEEEEEc------CCeEEEEEEEEEcC
Confidence 46899999999999998764 3 678999999 89999999999999997 36899999999999
Q ss_pred CCCcceeHHHHHHHHcCCCCCHHHHHHHHHHHhhcCCCCCCC-CCHHHHhHHHHHHHHHHHHHHhhh
Q 002932 484 GTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGT-SIPAYRSSLAVGFLYEFFGSLTEM 549 (864)
Q Consensus 484 ~~~~p~ra~~~E~~L~Gk~l~~~~l~~a~~~l~~e~~p~~~~-~sa~YRr~la~~L~~r~l~~~~~~ 549 (864)
+++ |+|++++|++|.||+|+++++++|++.+.+++.|.+|. +|++||++|+.+|++|++.++..+
T Consensus 388 a~~-p~ra~~~E~~L~G~~~~~~~~~~a~~~~~~~~~p~~d~rgs~~YR~~la~~l~~r~l~~~~~~ 453 (462)
T 2w3s_A 388 AGV-PKRAAAFEAALIGQDFREDTIAAALPLLAQDFTPLSDMRASAAYRMNAAQAMALRYVRELSGE 453 (462)
T ss_dssp SSS-CEECHHHHHTTTTSBCSHHHHHHHGGGHHHHCCCCCBTTBCHHHHHHHHHHHHHHHHHHTTTC
T ss_pred CCc-ceEhHHHHHHhcCCCCCHHHHHHHHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcc
Confidence 999 99999999999999999999999999999999999987 599999999999999999988654
No 4
>1vlb_A Aldehyde oxidoreductase; iron-sulphur cluster; HET: PCD; 1.28A {Desulfovibrio gigas} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1 PDB: 1sij_A* 1zcs_A* 3fah_A* 3fc4_A* 3l4p_A*
Probab=100.00 E-value=8.1e-92 Score=862.81 Aligned_cols=424 Identities=26% Similarity=0.379 Sum_probs=369.1
Q ss_pred eEEEEEECCEEEEEecCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEeecCCCcccCCceeecccccchhhc-cC
Q 002932 12 HSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSV-NG 90 (864)
Q Consensus 12 ~~i~~~lNg~~~~~~~~~~~~~Ll~~LR~~~~l~g~K~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~p~~~~-~g 90 (864)
++|+|+|||+.++++ ++|+++|||+||++++|||||.||++|.||||||+| ||++++||++|+.++ +|
T Consensus 2 ~~~~~~~ng~~~~~~-~~~~~~ll~~Lr~~~~l~g~k~gC~~g~CGaCtv~v----------dg~~~~sC~~~~~~~~~g 70 (907)
T 1vlb_A 2 IQKVITVNGIEQNLF-VDAEALLSDVLRQQLGLTGVKVGCEQGQCGACSVIL----------DGKVVRACVTKMKRVADG 70 (907)
T ss_dssp EEEEEEETTEEEEEE-ECTTSBHHHHHHHTTCCTTSCCSSSSSSSCTTEEEE----------TTEEEEGGGCBGGGSCTT
T ss_pred ceEEEEECCEEEEEe-cCCCChHHHHHHHhcCCCeecCCCCCCCcCccEEEE----------CCeEeechHhHHHHHcCC
Confidence 469999999999997 899999999999999999999999999999999999 799999999999999 99
Q ss_pred ceeEEecCCCCCCCCcchHhHHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHHh--CCcc
Q 002932 91 CLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIA--GNLC 168 (864)
Q Consensus 91 ~~i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtPG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~--gnlC 168 (864)
++|+|||||++ .+.|||+|+||+++|++|||||||||||++++||++ +|+| |++||+++|+ ||||
T Consensus 71 ~~i~Tiegl~~-~~~~~~~q~a~~~~~~~qCG~c~pg~~~~~~~ll~~-----~~~p-------~~~~i~~~~~~~gn~c 137 (907)
T 1vlb_A 71 AQITTIEGVGQ-PENLHPLQKAWVLHGGAQCGFCSPGFIVSAKGLLDT-----NADP-------SREDVRDWFQKHRNAC 137 (907)
T ss_dssp CEEECHHHHCB-TTBCCHHHHHHHHHTCCSSCTTHHHHHHHHHHHHTT-----CSSC-------CHHHHHHHHHHTTCCC
T ss_pred CcEEEECCCCC-CcCcCHHHHHHHHcCCCCCCcChHHHHHHHHHHHHc-----CCCC-------CHHHHHHHHHhcCCCc
Confidence 99999999986 568999999999999999999999999999999943 4666 6999999999 9999
Q ss_pred ccCCChhHHHHHHHhhhcccccccCCCcccccCCcccccccCCCCCCCCCcccCCCcccccccCcceeecCCceEEecCC
Q 002932 169 RCTGYRPIADACKSFAADVDIEDLGINSFWAKGESKEVKISRLPPYKHNGELCRFPLFLKKENSSAMLLDVKGSWHSPIS 248 (864)
Q Consensus 169 RCtgy~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~P~t 248 (864)
|||||.+|++|++.++..
T Consensus 138 RctgY~~i~~a~~~aa~~-------------------------------------------------------------- 155 (907)
T 1vlb_A 138 RCTGYKPLVDAVMDAAAV-------------------------------------------------------------- 155 (907)
T ss_dssp SSSCSHHHHHHHHHHHHH--------------------------------------------------------------
T ss_pred cccchHHHHHHHHHHHHh--------------------------------------------------------------
Confidence 999999999999864310
Q ss_pred HHHHHHHHhhhcCCCCCcceEEccCccceEeeecccCceeeeCCCCccccceEecCCcEEecccccHHHHHHHHHHHhhh
Q 002932 249 VQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIEALKEETKE 328 (864)
Q Consensus 249 l~eal~ll~~~~~~~~~~a~lvaGgTdl~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~~~l~~~~~~ 328 (864)
+. .
T Consensus 156 -------~~------~---------------------------------------------------------------- 158 (907)
T 1vlb_A 156 -------IN------G---------------------------------------------------------------- 158 (907)
T ss_dssp -------HT------T----------------------------------------------------------------
T ss_pred -------hc------c----------------------------------------------------------------
Confidence 00 0
Q ss_pred hhhhhhhhHHHHHHHHHHhccccccCCcccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCeeEEEehhhhhcCCCCC
Q 002932 329 FHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEEFLERPPLD 408 (864)
Q Consensus 329 ~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~f~sD~~p~LlaldA~v~l~s~~g~R~vpl~dF~~~~~l~ 408 (864)
+ .
T Consensus 159 --------------------------------------~----~------------------------------------ 160 (907)
T 1vlb_A 159 --------------------------------------K----K------------------------------------ 160 (907)
T ss_dssp --------------------------------------S----S------------------------------------
T ss_pred --------------------------------------C----C------------------------------------
Confidence 0 0
Q ss_pred CCceEEEEEcCCCCccCCcccCCCcceEEEEEEeccCCCCCccceeeeeEEEEEcCCCCCCCceeeeeEEEEcccCCCcc
Q 002932 409 SRSILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFGAFGTKHA 488 (864)
Q Consensus 409 ~~Eii~~I~iP~~~~~~~~~~~~~~~~~~~~~K~~~R~~~~dia~v~~A~~v~~~~~~~~~~~~i~~~ria~Ggv~~~~p 488 (864)
++. . . +
T Consensus 161 ------------~~~----------~---------------------------------------------------~-~ 166 (907)
T 1vlb_A 161 ------------PET----------D---------------------------------------------------L-E 166 (907)
T ss_dssp ------------CGG----------G---------------------------------------------------G-S
T ss_pred ------------ccc----------c---------------------------------------------------c-c
Confidence 000 0 0 0
Q ss_pred eeHHHHHHHHcCCCCCHHHHHHHHHHHhhcCCCCCCCCCHHHHhHHHHHHHHHHHHHHhhhhcCCCccccCCCCCCCCcc
Q 002932 489 IRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGTSIPAYRSSLAVGFLYEFFGSLTEMKNGISRDWLCGYSNNVSLK 568 (864)
Q Consensus 489 ~ra~~~E~~L~Gk~l~~~~l~~a~~~l~~e~~p~~~~~sa~YRr~la~~L~~r~l~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (864)
.+
T Consensus 167 -------------------------------------------------------------~k----------------- 168 (907)
T 1vlb_A 167 -------------------------------------------------------------FK----------------- 168 (907)
T ss_dssp -------------------------------------------------------------CC-----------------
T ss_pred -------------------------------------------------------------cc-----------------
Confidence 00
Q ss_pred ccccccccccccccccccccCccccccccCcCCcCCCCcccccccccccccceeccccC---CCCCCceEEEEEecCCcC
Q 002932 569 DSHVQQNHKQFDESKVPTLLSSAEQVVQLSREYYPVGEPITKSGAALQASGEAIYVDDI---PSPINCLYGAFIYSTKPL 645 (864)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~s~g~q~~~~~~~~~~vG~~~~r~d~~~kvtG~a~Y~~Di---~~~~gmL~a~ivrSp~a~ 645 (864)
.+.++++|||+++|+|+..||||+++|++|+ . +|||||+++||||++|
T Consensus 169 ----------------------------~p~~~~~iG~~~~R~d~~~kvtG~a~Y~~D~~~~~-~~gmL~a~~vrSp~ah 219 (907)
T 1vlb_A 169 ----------------------------MPADGRIWGSKYPRPTAVAKVTGTLDYGADLGLKM-PAGTLHLAMVQAKVSH 219 (907)
T ss_dssp ----------------------------CCSSCCCTTSCCCCTTHHHHHTTCSCCHHHHHHTS-CTTCEEEEEEECSSSS
T ss_pred ----------------------------CccccccCCCcCccccchhhcCCceeeecccCcCC-CCCCeEEEEEecCCCC
Confidence 0012256899999999999999999999999 6 8999999999999999
Q ss_pred ceeccCCCCcCCCCCCEEEEEEcCCCCCCCCCCCCc------ccCCCcccccCCceeecCCcEEEEEeCCHHHHHHhccc
Q 002932 646 ARIKGIEFKSESVPDVVTALLSYKDIPEGGQNIGSK------TIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADV 719 (864)
Q Consensus 646 a~I~~ID~s~A~~~pGVv~vvt~~Dip~~g~n~~~~------~~~~~~p~~a~~~V~y~GqpVa~VvAet~~~A~~Aa~~ 719 (864)
|+|++||+++|++||||++|+|++|+|......+.. ....++|+|++++|+|+|||||+|||+|+|+|++|+++
T Consensus 220 arI~sID~s~A~~~pGV~~V~t~~D~p~~~~~~g~~~~~~~~~~~~~~~~la~~~Vr~~Gq~VA~VvA~t~~~A~~Aa~~ 299 (907)
T 1vlb_A 220 ANIKGIDTSEALTMPGVHSVITHKDVKGKNRITGLITFPTNKGDGWDRPILCDEKVFQYGDCIALVCADSEANARAAAEK 299 (907)
T ss_dssp EEEEEEECHHHHTSTTEEEEECGGGCCSCSEECCSSCCTTCSSCSCCEESSCSSEECSTTCEEEEEEESSHHHHHHHHTT
T ss_pred eEEEEechhHHhcCCCeEEEEEcccCcccccccCccccccccccCCCchhccCCeEEEcCCeEEEEEECCHHHHHHHhcc
Confidence 999999999999999999999999998311111110 02358899999999999999999999999999999999
Q ss_pred ceEEEecCCCCCccCCHHHHHhcCCC--ccCCCcc---ccCCCCChhhhc-ccCCEEEEEEEEEECccccCCCCCCeEEE
Q 002932 720 AVVDYEMGNLEPPILSVEEAVDRSSL--FEVPSFL---YPKPVGDISKGM-NEADHRILAAEIKLGSQYYFYMETQTALA 793 (864)
Q Consensus 720 V~V~y~~e~l~p~v~~~~~Al~~~~~--~~~~~~~---~~~~~Gd~~~a~-~~a~~vvve~~~~~~~q~H~~mEp~~a~A 793 (864)
|+|+| |++ |+++|+++|++++++ |+..+|+ ....+||++++| ++|+++ ||++|++++|+|+||||++++|
T Consensus 300 v~Vey--e~l-p~v~~~~~Al~~~a~~i~~~~~n~~~~~~~~~Gd~~~af~a~A~~v-ve~~y~~~~~~h~~mEp~~~~A 375 (907)
T 1vlb_A 300 VKVDL--EEL-PAYMSGPAAAAEDAIEIHPGTPNVYFEQPIVKGEDTGPIFASADVT-VEGDFYVGRQPHMPIEPDVAFA 375 (907)
T ss_dssp CEEEE--EEC-CCCCSHHHHHSTTCCCSSTTSCSEEEEEEEEESSCHHHHHHHCSEE-EEEEEEECCCCCCCSSCCEEEE
T ss_pred eEEEE--EcC-CCCCCHHHHHhhcCccccccccccccccccccCChhhhhcccCCeE-EEEEEEECCccccCCCCCeEEE
Confidence 99999 888 899999999998874 3321343 234689999999 999996 9999999999999999999999
Q ss_pred EECCCCcEEEEeCCCChHHHHHHHHHHhCCCCCCEEEEeCCcCCCCCCCCCCChHHHHHHHHHHHHcCCC
Q 002932 794 VPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGKAIKAMPFNIVGATIELLTVYR 863 (864)
Q Consensus 794 ~~~~dg~l~V~~stQ~p~~~r~~vA~~Lglp~~kV~V~~~~~GGgFGgK~~~~~~~~~~aAlaA~~t~~~ 863 (864)
+|++||+|+||+|||+|+.+|..||++||||++||||+++++|||||+|.+.. . ++.+|++|+++|||
T Consensus 376 ~~~~~g~l~v~~stQ~p~~~r~~lA~~Lglp~~~VrV~~~~vGGgFG~K~~~~-~-~~~aA~~A~~~grP 443 (907)
T 1vlb_A 376 YMGDDGKCYIHSKSIGVHLHLYMIAPGVGLEPDQLVLVANPMGGTFGYKFSPT-S-EALVAVAAMATGRP 443 (907)
T ss_dssp EECTTSCEEEEESCSCHHHHHHHHHHHHTCCGGGEEEEECCCSCCTTGGGSCS-S-HHHHHHHHHHHSSC
T ss_pred EEcCCCcEEEEECCcChHHHHHHHHHHhCCChhhEEEEeCcCCCCCCCCcccc-H-HHHHHHHHHHhCCC
Confidence 99976799999999999999999999999999999999999999999999864 3 67889999999998
No 5
>1dgj_A Aldehyde oxidoreductase; beta half-barrel, four-helix bundle, beta barrel; HET: MCN; 2.80A {Desulfovibrio desulfuricans} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1
Probab=100.00 E-value=1.3e-91 Score=861.06 Aligned_cols=425 Identities=26% Similarity=0.370 Sum_probs=368.8
Q ss_pred eEEEEEECCEEEEEecCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEeecCCCcccCCceeecccccchhhc-cC
Q 002932 12 HSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSV-NG 90 (864)
Q Consensus 12 ~~i~~~lNg~~~~~~~~~~~~~Ll~~LR~~~~l~g~K~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~p~~~~-~g 90 (864)
++|+|+|||+.++++ ++|+++|||+||++++|||||.||++|.||||||+| ||++++||++|+.++ +|
T Consensus 2 ~~~~~~~ng~~~~~~-~~~~~~ll~~Lr~~~~l~g~k~gC~~G~CGaCtv~v----------dg~~v~sC~~~~~~~~~g 70 (907)
T 1dgj_A 2 ETKTLIVNGMARRLL-VSPNDLLVDVLRSQLQLTSVKVGCGKGQCGACTVIL----------DGKVVRACIIKMSRVAEN 70 (907)
T ss_dssp EEEECEETTBCCEEE-ECTTCBHHHHHHHTTCCTTSCCSSSSSSSCTTEEEE----------TTEEEEGGGCBGGGSCTT
T ss_pred ceEEEEECCEEEEEe-cCCCCcHHHHHHHhcCCCccCCCCCCCCcCceEEEE----------CCeEeehhHhHHHHHcCC
Confidence 469999999999997 899999999999999999999999999999999999 799999999999999 99
Q ss_pred ceeEEecCCCCCCCCcchHhHHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHHh--CCcc
Q 002932 91 CLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIA--GNLC 168 (864)
Q Consensus 91 ~~i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtPG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~--gnlC 168 (864)
++|+|||||++ .+.|||+|+||+++|++|||||||||||++++||++ +|+| |++||+++|+ ||||
T Consensus 71 ~~i~TiEgl~~-~~~~~~~q~a~~~~~~~qCG~c~pg~~~~~~~ll~~-----~~~p-------~~~~i~~~~~~~gnlc 137 (907)
T 1dgj_A 71 ASVTTLEGIGA-PDCLHPLQHAWIQHGAAQCGFCTPGFIVSAKALLDE-----NVAP-------SREDVRDWFQKHHNIC 137 (907)
T ss_dssp CEEECGGGTCB-TTBCCHHHHHHHHHTCCSSCTTHHHHHHHHHHHHHH-----CSSC-------CHHHHHHHHHHTTCCC
T ss_pred CcEEEECCCCC-CcccCHHHHHHHHcCCCCCCcChhHHHHHHHHHHhc-----CCCC-------CHHHHHHHHHhcCCCc
Confidence 99999999986 578999999999999999999999999999999965 3555 6999999999 9999
Q ss_pred ccCCChhHHHHHHHhhhcccccccCCCcccccCCcccccccCCCCCCCCCcccCCCcccccccCcceeecCCceEEecCC
Q 002932 169 RCTGYRPIADACKSFAADVDIEDLGINSFWAKGESKEVKISRLPPYKHNGELCRFPLFLKKENSSAMLLDVKGSWHSPIS 248 (864)
Q Consensus 169 RCtgy~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~P~t 248 (864)
|||||.+|++|++.++..
T Consensus 138 RctgY~~i~~a~~~aa~~-------------------------------------------------------------- 155 (907)
T 1dgj_A 138 RCTGYKPLVDAVMDAAAI-------------------------------------------------------------- 155 (907)
T ss_dssp SSSCSHHHHHHHHHHHHH--------------------------------------------------------------
T ss_pred ccccHHHHHHHHHHHHHh--------------------------------------------------------------
Confidence 999999999999864310
Q ss_pred HHHHHHHHhhhcCCCCCcceEEccCccceEeeecccCceeeeCCCCccccceEecCCcEEecccccHHHHHHHHHHHhhh
Q 002932 249 VQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIEALKEETKE 328 (864)
Q Consensus 249 l~eal~ll~~~~~~~~~~a~lvaGgTdl~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~~~l~~~~~~ 328 (864)
++ .+ .
T Consensus 156 -------~~------~~-------------------------------~------------------------------- 160 (907)
T 1dgj_A 156 -------LR------GE-------------------------------K------------------------------- 160 (907)
T ss_dssp -------HT------TS-------------------------------S-------------------------------
T ss_pred -------hc------cC-------------------------------C-------------------------------
Confidence 00 00 0
Q ss_pred hhhhhhhhHHHHHHHHHHhccccccCCcccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCeeEEEehhhhhcCCCCC
Q 002932 329 FHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEEFLERPPLD 408 (864)
Q Consensus 329 ~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~f~sD~~p~LlaldA~v~l~s~~g~R~vpl~dF~~~~~l~ 408 (864)
.| .+ |
T Consensus 161 -------------------------------------~~----~~---------------------------~------- 165 (907)
T 1dgj_A 161 -------------------------------------TV----EE---------------------------I------- 165 (907)
T ss_dssp -------------------------------------CH----HH---------------------------H-------
T ss_pred -------------------------------------Ch----hh---------------------------h-------
Confidence 00 00 0
Q ss_pred CCceEEEEEcCCCCccCCcccCCCcceEEEEEEeccCCCCCccceeeeeEEEEEcCCCCCCCceeeeeEEEEcccCCCcc
Q 002932 409 SRSILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFGAFGTKHA 488 (864)
Q Consensus 409 ~~Eii~~I~iP~~~~~~~~~~~~~~~~~~~~~K~~~R~~~~dia~v~~A~~v~~~~~~~~~~~~i~~~ria~Ggv~~~~p 488 (864)
+
T Consensus 166 -------------------------------------------------------------------------------~ 166 (907)
T 1dgj_A 166 -------------------------------------------------------------------------------S 166 (907)
T ss_dssp -------------------------------------------------------------------------------S
T ss_pred -------------------------------------------------------------------------------c
Confidence 0
Q ss_pred eeHHHHHHHHcCCCCCHHHHHHHHHHHhhcCCCCCCCCCHHHHhHHHHHHHHHHHHHHhhhhcCCCccccCCCCCCCCcc
Q 002932 489 IRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGTSIPAYRSSLAVGFLYEFFGSLTEMKNGISRDWLCGYSNNVSLK 568 (864)
Q Consensus 489 ~ra~~~E~~L~Gk~l~~~~l~~a~~~l~~e~~p~~~~~sa~YRr~la~~L~~r~l~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (864)
++
T Consensus 167 -------------------------------------------------------------~k----------------- 168 (907)
T 1dgj_A 167 -------------------------------------------------------------FK----------------- 168 (907)
T ss_dssp -------------------------------------------------------------CC-----------------
T ss_pred -------------------------------------------------------------cc-----------------
Confidence 00
Q ss_pred ccccccccccccccccccccCccccccccCcCCcCCCCcccccccccccccceecccc--CCCCCCceEEEEEecCCcCc
Q 002932 569 DSHVQQNHKQFDESKVPTLLSSAEQVVQLSREYYPVGEPITKSGAALQASGEAIYVDD--IPSPINCLYGAFIYSTKPLA 646 (864)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~s~g~q~~~~~~~~~~vG~~~~r~d~~~kvtG~a~Y~~D--i~~~~gmL~a~ivrSp~a~a 646 (864)
.+.++++|||+++|+|+..||||+++|++| ++.+|||||+++||||++||
T Consensus 169 ----------------------------~p~~~~~iG~~~~R~d~~~kvtG~a~Y~~D~~~~~~~gmL~a~~vrSp~aha 220 (907)
T 1dgj_A 169 ----------------------------MPADGRIWGSSIPRPSAVAKVTGLAEFGADAALRMPENTLHLALAQAKVSHA 220 (907)
T ss_dssp ----------------------------CCTTCCCTTSCCCCTTHHHHHHTCCCBHHHHGGGSCTTCEEEEEEECSSSSE
T ss_pred ----------------------------CcccccccCCCCCCcchhhhcCCceEeecCcCccCCCCCeEEEEEecCCCCE
Confidence 001124689999999999999999999999 83379999999999999999
Q ss_pred eeccCCCCcCCCCCCEEEEEEcCCCCCCCCCCCCc------ccCCCcccccCCceeecCCcEEEEEeCCHHHHHHhcccc
Q 002932 647 RIKGIEFKSESVPDVVTALLSYKDIPEGGQNIGSK------TIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVA 720 (864)
Q Consensus 647 ~I~~ID~s~A~~~pGVv~vvt~~Dip~~g~n~~~~------~~~~~~p~~a~~~V~y~GqpVa~VvAet~~~A~~Aa~~V 720 (864)
+|++||+++|++||||++|+|++|+|......+.. ....++|+|++++|+|+|||||+|||+|+|+|++|+++|
T Consensus 221 rI~sID~s~A~~~PGV~~V~t~~D~p~~~~~~g~~~~~~~~~~~~~~~~la~~~Vry~Gq~VA~VvAet~~~A~~Aa~~v 300 (907)
T 1dgj_A 221 LIKGIDTSEAEKMPGVYKVLTHKDVKGKNRITGLITFPTNKGDGWERPILNDSKIFQYGDALAIVCADSEANARAAAEKV 300 (907)
T ss_dssp EEEEEECHHHHHSTTEEEEECGGGCCSCSEECCSSCCTTCSSCSCCEESSCSSEECSTTCEEEEEEESSHHHHHHHHTTC
T ss_pred EEEeCChHHHhcCCCcEEEEEcccCCccccccCccccccccccCCCcccccCCeEEEcCCeEEEEEECCHHHHHHHhccc
Confidence 99999999999999999999999998311111110 023588999999999999999999999999999999999
Q ss_pred eEEEecCCCCCccCCHHHHHhcCCC--ccCCCcc---ccCCCCChhhhc--ccCCEEEEEEEEEECccccCCCCCCeEEE
Q 002932 721 VVDYEMGNLEPPILSVEEAVDRSSL--FEVPSFL---YPKPVGDISKGM--NEADHRILAAEIKLGSQYYFYMETQTALA 793 (864)
Q Consensus 721 ~V~y~~e~l~p~v~~~~~Al~~~~~--~~~~~~~---~~~~~Gd~~~a~--~~a~~vvve~~~~~~~q~H~~mEp~~a~A 793 (864)
+|+| |++ |+++|+++|++++++ |+..+|+ ....+||++++| ++|+++ ||++|++++|+|+||||++|+|
T Consensus 301 ~Vey--e~l-p~v~~~~~Al~~~a~~i~~~~~n~~~~~~~~~Gd~~~af~~a~A~~v-ve~~y~~~~~~h~~mEp~~~~A 376 (907)
T 1dgj_A 301 KFDL--ELL-PEYMSAPEAMAPDAIEIHPGTPNVYYDQLEEKGEDTVPFFNDPANVV-AEGSYYTQRQPHLPIEPDVGYG 376 (907)
T ss_dssp EEEE--EEC-CCCCSHHHHHSTTCCCSBTTBCSEEEEEEEEESSCSHHHHSCTTSEE-EEEEEEECCCCCCCSSCCEEEE
T ss_pred EEEE--EcC-CCCCCHHHHHhhcCcccccccccccceeccccCChhhhhcccCCCEE-EEEEEEECCccccCCCCCeEEE
Confidence 9999 888 899999999998874 4321243 234689999999 999996 9999999999999999999999
Q ss_pred EECCCCcEEEEeCCCChHHHHHHHHHHhCCC-CCCEEEEeCCcCCCCCCCCCCChHHHHHHHHHHHHcCCC
Q 002932 794 VPDEDNCLVVYSSIQCPESAHATIARCLGIP-EHNVRVITRRVGGAFGGKAIKAMPFNIVGATIELLTVYR 863 (864)
Q Consensus 794 ~~~~dg~l~V~~stQ~p~~~r~~vA~~Lglp-~~kV~V~~~~~GGgFGgK~~~~~~~~~~aAlaA~~t~~~ 863 (864)
+|++||+|+||+|||+|+.+|..||++|||| ++||||+++++|||||+|.+.. . ++.||++|+++|||
T Consensus 377 ~~~~~g~l~v~~stQ~p~~~r~~lA~~Lglp~~~~VrV~~~~vGGgFG~K~~~~-~-~~~aA~~A~~~grP 445 (907)
T 1dgj_A 377 YINEQGQVVIHSKSVAIHLHALMIAPGLGLEFPKDLVLVQNTTGGTFGYKFSPT-M-EALVGVAVMATGRP 445 (907)
T ss_dssp EECTTSCEEEEECCSCHHHHHHHHHHHHTCCTTTTEEEEECBCSCCTTGGGSCS-S-HHHHHHHHHHHCSC
T ss_pred EEcCCCcEEEEECCcCHHHHHHHHHHHhCCCCCccEEEEeCCCCCCCCCCcccc-H-HHHHHHHHHHhCCC
Confidence 9997679999999999999999999999999 9999999999999999999864 3 67889999999998
No 6
>3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B*
Probab=100.00 E-value=3.8e-59 Score=509.68 Aligned_cols=294 Identities=22% Similarity=0.403 Sum_probs=267.6
Q ss_pred cceeecC-CceEEecCCHHHHHHHHhhhcCCCCCcceEEccCccceEe-eec-ccCceeeeCCCCccccceEecCCcEEe
Q 002932 233 SAMLLDV-KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYY-KEV-EHYDKYIDIRYIPELSVIRRDQTGIEI 309 (864)
Q Consensus 233 ~~~~~~~-~~~~~~P~tl~eal~ll~~~~~~~~~~a~lvaGgTdl~v~-k~~-~~~~~lIdl~~I~EL~~I~~~~~~l~I 309 (864)
+++.+.+ .++|++|+|++||+++|++ +++++++||||+|+++ +.+ ..++.+|||++|+||+.|+.++++|+|
T Consensus 2 ~~l~~~g~~~~y~~P~sl~ea~~ll~~-----~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~I 76 (305)
T 3nvz_B 2 KQLRFEGERVTWIQASTLKELLDLKAQ-----HPEAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHGPEGISF 76 (305)
T ss_dssp CCEEEECSSCEEEECCSHHHHHHHHHH-----CTTCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEECSSEEEE
T ss_pred CceEecCCCeEEEccCCHHHHHHHHHh-----CCCCEEEECccHHHHHHhcCCCCCCEEEECCCChhhcceEECCCeEEE
Confidence 4567777 8999999999999999984 5789999999999984 433 678999999999999999999999999
Q ss_pred cccccHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHhccccccCCcccCCccccccCCCCCCchHHHHHhcCcEEEEEe
Q 002932 310 GATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMT 389 (864)
Q Consensus 310 GA~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~f~sD~~p~LlaldA~v~l~s 389 (864)
||+||+++|++++.+.+..+|....+.+|.|++++++|||+||||+||||||||+++|. ||++|+|+||||+|+|.+
T Consensus 77 GA~vt~~~l~~~~~~~~~~~p~~~~~~~p~L~~a~~~ia~~qiRN~aTiGGNl~~a~p~---sD~~~~L~AldA~v~l~~ 153 (305)
T 3nvz_B 77 GAACALSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITASPI---SDLNPVFMASGTKLTIVS 153 (305)
T ss_dssp ETTCBHHHHHHHHHHHHHHSCGGGCHHHHHHHHHHTTSSCHHHHTTCBHHHHHHHCCTT---CSSHHHHHHHTCEEEEEE
T ss_pred ccCCcHHHHHHHHHhhhcccchhhhhhhHHHHHHHHHhCCHHHhCeeechheeCCCCCc---hHHHHHHHHcCCEEEEEc
Confidence 99999999999877655555555667899999999999999999999999999999998 999999999999999999
Q ss_pred CCeeEEEehh-hhhc---CCCCCCCceEEEEEcCCCCccCCcccCCCcceEEEEEEeccCCCCCccceeeeeEEEEEcCC
Q 002932 390 GQKCEKLMLE-EFLE---RPPLDSRSILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPC 465 (864)
Q Consensus 390 ~~g~R~vpl~-dF~~---~~~l~~~Eii~~I~iP~~~~~~~~~~~~~~~~~~~~~K~~~R~~~~dia~v~~A~~v~~~~~ 465 (864)
.+|+|+||++ |||. ++.|.++|||++|+||.+.. +.++.+||+++| +++|||+||+|+.++++++
T Consensus 154 ~~G~R~vp~~~df~~g~~~t~l~~~Eil~~I~iP~~~~----------~~~~~~~k~~~R-~~~d~a~v~~A~~~~~~~~ 222 (305)
T 3nvz_B 154 RGTRRTVPMDHTFFPSYRKTLLGPEEILLSIEIPYSRE----------DEFFSAFKQASR-REDDIAKVTCGMRVLFQPG 222 (305)
T ss_dssp TTEEEEEECCGGGCCSTTCCSCCTTCEEEEEEEECCCT----------TEEEEEEECSCC-CSSSSCCCEEEEEEEESTT
T ss_pred CCCcEEEEeehHhhcCcccccCCCCcEEEEEEecCCCC----------CCceEEEEEEec-CCCChhheEEEEEEEEeCC
Confidence 9999999998 8997 57899999999999998865 456778999999 8999999999999999741
Q ss_pred CCCCCceeeeeEEEEcccCCCcceeHHHHHHHHcCCCCCHHHHHHHHHHHhhcCC-CCCCC-CCHHHHhHHHHHHHHHHH
Q 002932 466 KTGDGIRVNNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVV-PEDGT-SIPAYRSSLAVGFLYEFF 543 (864)
Q Consensus 466 ~~~~~~~i~~~ria~Ggv~~~~p~ra~~~E~~L~Gk~l~~~~l~~a~~~l~~e~~-p~~~~-~sa~YRr~la~~L~~r~l 543 (864)
+++|+++||+|||++++ |+|++++|++|.||+|+++++++|++.+.+++. |.+|. +|++||++|+.+|++|||
T Consensus 223 ----~~~i~~~ria~Ggv~~~-p~ra~~~E~~L~G~~~~~~~~~~a~~~~~~~~~~~~~d~~~s~~YR~~la~~l~~r~l 297 (305)
T 3nvz_B 223 ----SMQVKELALCYGGMADR-TISALKTTQKQLSKFWNEKLLQDVCAGLAEELSLSPDAPGGMIEFRRTLTLSFFFKFY 297 (305)
T ss_dssp ----SSBEEEEEEEEESSSSS-CEECHHHHHTTTTCBSSHHHHHHHHHHHHHHTCCCTTCTTCCHHHHHHHHHHHHHHHH
T ss_pred ----CCeEEEEEEEEEcccCc-EeeHHHHHHHhcCCCCCHHHHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 37999999999999999 999999999999999999999999999999996 66665 699999999999999999
Q ss_pred HHHhhhh
Q 002932 544 GSLTEMK 550 (864)
Q Consensus 544 ~~~~~~~ 550 (864)
.++.+++
T Consensus 298 ~~~~~~l 304 (305)
T 3nvz_B 298 LTVLKKL 304 (305)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 9998764
No 7
>3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=100.00 E-value=2.2e-58 Score=501.30 Aligned_cols=277 Identities=21% Similarity=0.286 Sum_probs=255.4
Q ss_pred CceEEecCCHHHHHHHHhhhcCCCCC--cceEEccCccceE-eeec-ccCceeeeCCCCccccceEecCCcEEecccccH
Q 002932 240 KGSWHSPISVQELRNVLESVEGSNQI--SSKLVAGNTGMGY-YKEV-EHYDKYIDIRYIPELSVIRRDQTGIEIGATVTI 315 (864)
Q Consensus 240 ~~~~~~P~tl~eal~ll~~~~~~~~~--~a~lvaGgTdl~v-~k~~-~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl 315 (864)
.|+|++|+||+||+++|++ ++ +++++||||+|++ +|.+ ..|+.+|||++|+||++|+.++++|+|||+||+
T Consensus 3 ~f~y~~P~sl~ea~~ll~~-----~~~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vt~ 77 (296)
T 3hrd_C 3 DFEFFAPKTLEEAKGLLHQ-----YKDVPPAIIAGGTDLVIEINDRWEKPDVVIDIKKLKELEYIRVEENTIHIGALSTF 77 (296)
T ss_dssp CCEEECCSSHHHHHHHHHH-----TTTSCCEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEECSSEEEEETTCBH
T ss_pred ceeEeCCCCHHHHHHHHHh-----CCCCCeEEEECCcHHHHHhhcCCCCCCeEEEcccChhhcceEEcCCeEEEccCCcH
Confidence 4899999999999999995 34 5999999999999 4554 579999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHhccccccCCcccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCeeEE
Q 002932 316 SKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEK 395 (864)
Q Consensus 316 ~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~f~sD~~p~LlaldA~v~l~s~~g~R~ 395 (864)
++|+++.. ..+++|.|.+++++|||+||||+||||||||+++|. ||++|+|+||||+|+|.+.+|+|+
T Consensus 78 ~~l~~~~~---------~~~~~p~L~~a~~~ias~qIRN~aTiGGNi~~a~p~---sD~~~~LlAldA~v~l~~~~g~R~ 145 (296)
T 3hrd_C 78 TQIENHPF---------IRSHVRALYKAASQVGSPQIRNLGTIGGNLSTSSVA---GDGVSAMTTLDATVVLESVRGTRQ 145 (296)
T ss_dssp HHHHHCHH---------HHHHCHHHHHHHHTSSCHHHHHHCBHHHHHHHTCTT---CHHHHHHHHTTCEEEEEETTEEEE
T ss_pred HHHHhChh---------hhhHhHHHHHHHHHhCCHHHhcceehhhhhccCCCc---hHHHHHHHHhCcEEEEEcCCceEE
Confidence 99997521 123699999999999999999999999999999998 999999999999999999999999
Q ss_pred Eehhhhhc------CCCCCCCceEEEEEcCCCCccCCcccCCCcceEEEEEEeccCCCCCccceeeeeEEEEEcCCCCCC
Q 002932 396 LMLEEFLE------RPPLDSRSILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGD 469 (864)
Q Consensus 396 vpl~dF~~------~~~l~~~Eii~~I~iP~~~~~~~~~~~~~~~~~~~~~K~~~R~~~~dia~v~~A~~v~~~~~~~~~ 469 (864)
||++|||. ++.|+++|||++|+||.+.. +.++.+||+++| +++|||+||+|+.+++++
T Consensus 146 vp~~dF~~g~~~~~~t~L~~~Eil~~I~iP~~~~----------~~~~~~~K~~~R-~~~d~a~v~~A~~~~~~~----- 209 (296)
T 3hrd_C 146 MKLTDFFDGEGFKRRNALEADEIMTEVIIDRPDA----------HSASAFYKLAKR-KSLAISVIGGGMAVKVDD----- 209 (296)
T ss_dssp EEHHHHHHCCSSSSSSSCCTTCEEEEEEEECCCT----------TEEEEEEEECSS-SSSCCCSEEEEEEEEEET-----
T ss_pred EEHHHHhcccccccccCCCCCcEEEEEEecCCCC----------CCceEEEEeccc-cccchhhheEEEEEEEcC-----
Confidence 99999997 67899999999999999864 466778899999 899999999999999974
Q ss_pred CceeeeeEEEEcccCCCcceeHHHHHHHHcCCCCCHHHHHHHHHHHhhcCCCCCCC-CCHHHHhHHHHHHHHHHHHHHhh
Q 002932 470 GIRVNNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGT-SIPAYRSSLAVGFLYEFFGSLTE 548 (864)
Q Consensus 470 ~~~i~~~ria~Ggv~~~~p~ra~~~E~~L~Gk~l~~~~l~~a~~~l~~e~~p~~~~-~sa~YRr~la~~L~~r~l~~~~~ 548 (864)
+++|+++||+|||++++ |+|++++|++|.||+|+++++++|++.+.+++.|.+|. +|++||++|+.+|++|+|.++..
T Consensus 210 ~g~i~~~ria~Ggv~~~-p~ra~~~E~~L~G~~~~~~~~~~a~~~~~~~~~p~~d~r~s~~YR~~la~~l~~r~l~~~~~ 288 (296)
T 3hrd_C 210 AGVCTWASMRGGCIGRY-PLHFKQAEEMLVGAPLTMETMEATLPILHDTVYDMARARPSVLYKKESVQGVFKKLFVDILD 288 (296)
T ss_dssp TTEEEEEEEEEETSSSS-CEECHHHHHHHTTSBCCHHHHHTTHHHHHHHHHHHTTTCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEEEEECCCcc-ccchHHHHHHhcCCCCCHHHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 46999999999999999 99999999999999999999999999999999998887 59999999999999999999998
Q ss_pred hh
Q 002932 549 MK 550 (864)
Q Consensus 549 ~~ 550 (864)
+.
T Consensus 289 ~~ 290 (296)
T 3hrd_C 289 QL 290 (296)
T ss_dssp HH
T ss_pred Hh
Confidence 75
No 8
>3nvw_A Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, guanine, oxidoredu; HET: FAD MTE GUN; 1.60A {Bos taurus} PDB: 3etr_A* 3ns1_A* 3nvv_A* 3nrz_A* 3nvy_A* 3nvz_A* 3rca_A* 3sr6_A* 3eub_A*
Probab=100.00 E-value=2e-59 Score=458.87 Aligned_cols=162 Identities=50% Similarity=0.995 Sum_probs=150.8
Q ss_pred eeEEEEEECCEEEEEecCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEeecCCCcccCCceeecccccchhhccC
Q 002932 11 RHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNG 90 (864)
Q Consensus 11 ~~~i~~~lNg~~~~~~~~~~~~~Ll~~LR~~~~l~g~K~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~p~~~~~g 90 (864)
+++|+|+|||+++...+++|+++||||||+++||||||.||++|+||||||+|+++++.++++.|++||||++|+.+++|
T Consensus 2 ~~~i~~~vNG~~~~~~~~~p~~~Ll~~LR~~lgltGtK~GC~~G~CGACTVlvd~~~~~~~~~~g~~v~SCl~~a~~~~G 81 (164)
T 3nvw_A 2 ADELVFFVNGKKVVEKNADPETTLLAYLRRKLGLRGTKLGCGEGGCGACTVMLSKYDRLQDKIIHFSANACLAPICTLHH 81 (164)
T ss_dssp CCCEEEEETTEEEEETTCCTTCBHHHHHHHTSCCTTSCCSCSSSSSCTTEEEEEEEETTTTEEEEEEEETTTCBGGGCTT
T ss_pred CceEEEEECCEEEEEecCCCCCCHHHHHHHHcCCCCcCCCcCCCCCCCCEEEEccccccccccCCcEEehhhhhHHHhCC
Confidence 46799999999975434899999999999999999999999999999999999999888888889999999999999999
Q ss_pred ceeEEecCCCCCCCCcchHhHHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHHhCCcccc
Q 002932 91 CLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRC 170 (864)
Q Consensus 91 ~~i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtPG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRC 170 (864)
++|+|||||++.++.|||||+||+++|++|||||||||||++++||++ +|+| |++||+++|+||||||
T Consensus 82 ~~I~TiEGL~~~~~~lhpvQ~af~~~~~~QCGfCtPG~imsa~aLl~~-----~p~p-------t~~eI~~al~GNlCRC 149 (164)
T 3nvw_A 82 VAVTTVEGIGSTKTRLHPVQERIAKSHGSQCGFCTPGIVMSMYTLLRN-----QPEP-------TVEEIEDAFQGNLCRC 149 (164)
T ss_dssp CEEECGGGTCCTTSCCCHHHHHHHHTTCCSSCTTHHHHHHHHHHHHHH-----CSSC-------CHHHHHTSCTTCCCSS
T ss_pred cceEEecccCCCCCccCHHHHHHHHcCCCcCccchhhHHHHHHHHHHh-----CCCC-------CHHHHHHHHcCCCCCC
Confidence 999999999865567999999999999999999999999999999965 3666 6999999999999999
Q ss_pred CCChhHHHHHHHhh
Q 002932 171 TGYRPIADACKSFA 184 (864)
Q Consensus 171 tgy~~i~~a~~~~~ 184 (864)
|||++|++|+++|+
T Consensus 150 TgY~~I~~Av~~~~ 163 (164)
T 3nvw_A 150 TGYRPILQGFRTFA 163 (164)
T ss_dssp SCSHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHh
Confidence 99999999999886
No 9
>3hrd_A Nicotinate dehydrogenase large molybdopterin subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=100.00 E-value=3.3e-58 Score=523.19 Aligned_cols=254 Identities=25% Similarity=0.379 Sum_probs=231.7
Q ss_pred cCCcCCCCcccccccccccccceeccccCCCCCCceEEEEEecCCcCceeccCCCCcCCCCCCEEEEEEcCCCCCCCCCC
Q 002932 599 REYYPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNI 678 (864)
Q Consensus 599 ~~~~~vG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~ivrSp~a~a~I~~ID~s~A~~~pGVv~vvt~~Dip~~g~n~ 678 (864)
+++++|||+++|+|+..||||+++|++|+. +|||||++++|||++||+|++||+++|++||||++|+|++|+| +.|.
T Consensus 3 ~~~~~iG~~~~R~d~~~kvtG~a~Y~~Di~-~pgmL~a~~vrSp~a~a~I~siD~s~A~~~pGV~~V~t~~d~p--~~~~ 79 (425)
T 3hrd_A 3 KDYQVLGKNKVKVDSLEKVMGTAKFAADYS-FPDMLYAGVFRSTVPHARIVSLDLSKARAIDGVEAVLDYHAIP--GKNR 79 (425)
T ss_dssp CCCSSTBCCCCCTTHHHHHHTCCCBGGGCC-CTTCEEEEEEECSSSSEEEEEEECHHHHTSTTEEEEECGGGCS--SCCC
T ss_pred CCCCccCCcCcCcchHHHCCCceecccccC-CCCCEEEEEEeCCCCCEEEEEeEhHHHhcCCCeEEEEEcccCC--CcCc
Confidence 567899999999999999999999999997 7999999999999999999999999999999999999999998 5442
Q ss_pred CCcccCCCcccccCCceeecCCcEEEEEeCCHHHHHHhcccceEEEecCCCCCccCCHHHHHhcCCC--ccCCCcc---c
Q 002932 679 GSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSSL--FEVPSFL---Y 753 (864)
Q Consensus 679 ~~~~~~~~~p~~a~~~V~y~GqpVa~VvAet~~~A~~Aa~~V~V~y~~e~l~p~v~~~~~Al~~~~~--~~~~~~~---~ 753 (864)
......++|+|++++|+|+|||||+|||+|+|+|++|+++|+|+| |++ |+++|+++|++++++ |+ +.|+ .
T Consensus 80 -~~~~~~~~~~la~~~Vr~~G~~VA~VvA~t~~~A~~A~~~v~V~y--e~l-p~v~~~~~a~~~~a~~~~~-~~n~~~~~ 154 (425)
T 3hrd_A 80 -FGIIIKDEPCLVDDKVRRYGDAIAVVAAQTPDLVQEALDAITIEY--EEL-EGIFTMERALEEDSPAIHG-DTNIHQVK 154 (425)
T ss_dssp -BCSSSCCBCSSCSSCBCSTTCEEEEEEESSHHHHHHHHHHCEEEE--EEC-CCCCCHHHHHSTTSCCSST-TCSEEEEE
T ss_pred -CCCCCCccccccCceEEECCCeEEEEEECCHHHHHHHhcCCeEEE--EeC-CCCCCHHHHhhcCCccccC-CCcccccc
Confidence 123346899999999999999999999999999999999999999 788 899999999998864 33 2343 1
Q ss_pred cCCCCChhhhcccCCEEEEEEEEEECccccCCCCCCeEEEEECCCCcEEEEeCCCChHHHHHHHHHHhCCCCCCEEEEeC
Q 002932 754 PKPVGDISKGMNEADHRILAAEIKLGSQYYFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITR 833 (864)
Q Consensus 754 ~~~~Gd~~~a~~~a~~vvve~~~~~~~q~H~~mEp~~a~A~~~~dg~l~V~~stQ~p~~~r~~vA~~Lglp~~kV~V~~~ 833 (864)
....||++++|++|+++ ||++|++|+|+|+||||++|+|+|+++|+|+||+|||+|+.+|..||++||||++||+|+++
T Consensus 155 ~~~~Gd~~~a~a~A~~v-ve~~y~~~~~~H~~mEp~~~~A~~~~~g~l~v~~stQ~p~~~r~~vA~~Lglp~~~VrV~~~ 233 (425)
T 3hrd_A 155 HLEYGDVDAAFKQCDIV-VEDTYSTHRLTHMFIEPDAGVSYYDNEGMLTVVVSTQNPHYDRGEVAGMLALPNSKVRIIQA 233 (425)
T ss_dssp EEEESCHHHHHHTCSEE-EEEEEEECCCCCCCSSCCEEEEEECTTCCEEEEECCSCHHHHHHHHHHHTTCCGGGEEEEEC
T ss_pred ccccCCHHHHhhcCceE-EEEEEEeCCccccCCCCceEEEEECCCCeEEEEECCCCHHHHHHHHHHHhCCChhhEEEEeC
Confidence 35789999999999996 99999999999999999999999997778999999999999999999999999999999999
Q ss_pred CcCCCCCCCCCCChHHHHHHHHHHHHcCCC
Q 002932 834 RVGGAFGGKAIKAMPFNIVGATIELLTVYR 863 (864)
Q Consensus 834 ~~GGgFGgK~~~~~~~~~~aAlaA~~t~~~ 863 (864)
++|||||+|.+... .+.||++|+++|||
T Consensus 234 ~vGGgFG~K~~~~~--~~~aa~~A~~~grP 261 (425)
T 3hrd_A 234 TTGGGFGGKLDLSV--QCHCALLTYHTKKP 261 (425)
T ss_dssp BCCCCTTTTSSCSS--HHHHHHHHHHHCSC
T ss_pred CCCCCCCCCcccCH--HHHHHHHHHHhCCC
Confidence 99999999997543 35789999999998
No 10
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3
Probab=100.00 E-value=3.3e-56 Score=482.46 Aligned_cols=271 Identities=23% Similarity=0.289 Sum_probs=248.9
Q ss_pred CceEEecCCHHHHHHHHhhhcCCCCCcceEEccCccceEe-eec-ccCceeeeCCCCccccceEecCCcEEecccccHHH
Q 002932 240 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYY-KEV-EHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISK 317 (864)
Q Consensus 240 ~~~~~~P~tl~eal~ll~~~~~~~~~~a~lvaGgTdl~v~-k~~-~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~ 317 (864)
.|+|++|+|++||+++|+ ++++++++||||+|+++ |.+ ..|+.+|||++|+||+.|+.++++|+|||+||+++
T Consensus 5 ~f~y~~P~sl~ea~~ll~-----~~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vt~~~ 79 (288)
T 1t3q_C 5 AFSYRAPASLQEVIQVLA-----DDPDARIIAGGQSLLPLLAFRLVYPSCLVDLRNVSELFEISQSAGILSVGAMVTHFR 79 (288)
T ss_dssp CCEEECCSSHHHHHHHHH-----HCTTCEEESSCTTHHHHHHTTCCCCSEEEECTTCGGGGCEEEETTEEEEETTCBHHH
T ss_pred CceEECCCCHHHHHHHHh-----hCCCCEEEeCchhHHHHHhcCCCCCCEEEECCCChhhcCeEEcCCEEEEcCCCcHHH
Confidence 479999999999999998 35789999999999994 544 67899999999999999999999999999999999
Q ss_pred HHHH--HHHHhhhhhhhhhhhHHHHHHHHHHhccccccCCcccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCeeEE
Q 002932 318 AIEA--LKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEK 395 (864)
Q Consensus 318 l~~~--l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~f~sD~~p~LlaldA~v~l~s~~g~R~ 395 (864)
|+++ +++ .+|.|.+++++|||+||||+||||||||+++|. ||++|+|+||||+|+|.+.+|+|+
T Consensus 80 l~~~~~~~~-----------~~p~L~~a~~~ias~qiRN~aTiGGNi~~a~p~---sD~~~~L~Al~A~v~l~~~~g~R~ 145 (288)
T 1t3q_C 80 NKTDPTVAK-----------CVPILPKVLAHVAHQAVRNRGTLGGSLAHADAG---AEMPFLMATLGATMYIASSAGVRS 145 (288)
T ss_dssp HHHCHHHHH-----------HCTHHHHHHTTSSCHHHHTTCBHHHHHHHTCTT---CHHHHHHHHTTCEEEEEETTEEEE
T ss_pred HhcCHHHHH-----------HHHHHHHHHHHhCCHHHHcceechhhcccCCCc---HHHHHHHHHcCcEEEEEcCCceEE
Confidence 9984 332 589999999999999999999999999999998 999999999999999999999999
Q ss_pred Eehhhhhc---CCCCCCCceEEEEEcCCCCccCCcccCCCcceEEEEEEeccCCCCCccceeeeeEEEEEcCCCCCCCce
Q 002932 396 LMLEEFLE---RPPLDSRSILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIR 472 (864)
Q Consensus 396 vpl~dF~~---~~~l~~~Eii~~I~iP~~~~~~~~~~~~~~~~~~~~~K~~~R~~~~dia~v~~A~~v~~~~~~~~~~~~ 472 (864)
||++|||. ++.|+++|||++|+||.+.. ... ++|+++| .. |||+||+|+.++++ +++
T Consensus 146 vp~~dF~~g~~~t~L~~~Eil~~I~iP~~~~----------~~~--y~K~~~R-~~-d~a~v~~a~~~~~~------~~~ 205 (288)
T 1t3q_C 146 VSATDFMKGHYFTDLEAGEVLVRVEIPIPAL----------HWE--FDEYARR-KG-DYALVMAAAGLSMQ------GGR 205 (288)
T ss_dssp EEHHHHEEETTEESCCTTCEEEEEEEECCSS----------EEE--EEEECSS-TT-SCCSEEEEEEEEEE------TTE
T ss_pred EEHHHHhcCcccccCCCCCEEEEEEecCCCC----------CCc--EEEeCCC-cc-chhheEEEEEEEEc------CCe
Confidence 99999997 47899999999999998864 232 6888866 44 99999999999997 368
Q ss_pred eeeeEEEEcccCCCcceeHHHHHHHHcCCCCCHHHHHHHHHHHhhcCCCCCCC-CCHHHHhHHHHHHHHHHHHHHhhhh
Q 002932 473 VNNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGT-SIPAYRSSLAVGFLYEFFGSLTEMK 550 (864)
Q Consensus 473 i~~~ria~Ggv~~~~p~ra~~~E~~L~Gk~l~~~~l~~a~~~l~~e~~p~~~~-~sa~YRr~la~~L~~r~l~~~~~~~ 550 (864)
|+++||+|||++++ |+|++++|++|.||+|+++++++|++.+.+++.|.+|. +|++||++|+.+|++|++.++.++.
T Consensus 206 i~~~ria~Ggv~~~-p~r~~~~E~~L~G~~~~~~~~~~a~~~~~~~~~p~~d~r~s~~YR~~l~~~l~~r~l~~~~~~~ 283 (288)
T 1t3q_C 206 CVAARIALGAVEER-AHQAIRANDFLVGKVIDESTAATAAELATEGLEPRSDIHGSRDLRLSLAKAITQRVILKAAQGA 283 (288)
T ss_dssp EEEEEEEEESSSSS-CEECHHHHHHHTTCCCCHHHHHHHHHHHHTTCCCCCBTTBCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEECCCCe-eEEcHHHHHHhcCCCCCHHHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999 99999999999999999999999999999999999987 5999999999999999999998764
No 11
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C*
Probab=100.00 E-value=4.3e-55 Score=474.21 Aligned_cols=274 Identities=19% Similarity=0.233 Sum_probs=250.5
Q ss_pred CceEEecCCHHHHHHHHhhhcCCCCCcceEEccCccceEe-eec-ccCceeeeCCCCccccceEecCCcEEecccccHHH
Q 002932 240 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYY-KEV-EHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISK 317 (864)
Q Consensus 240 ~~~~~~P~tl~eal~ll~~~~~~~~~~a~lvaGgTdl~v~-k~~-~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~ 317 (864)
.|+|++|+|++||+++|+++ .+++++++|||+|+++ +.+ ..++.+|||++|+||+.|+.++++|+|||+||+++
T Consensus 5 ~~~~~~P~sl~ea~~ll~~~----~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~~t~~~ 80 (288)
T 1n62_C 5 SFDYHRPKSIADAVALLTKL----GEDARPLAGGHSLIPIMKTRLATPEHLVDLRDIGDLVGIREEGTDVVIGAMTTQHA 80 (288)
T ss_dssp CCEEECCSSHHHHHHHHHHH----GGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGSCEEEETTEEEEETTCBHHH
T ss_pred ceEEECcCCHHHHHHHHHhc----CCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcceEecCCEEEEccCCcHHH
Confidence 47899999999999999853 3789999999999994 665 57899999999999999999999999999999999
Q ss_pred HHHH--HHHHhhhhhhhhhhhHHHHHHHHHHhccccccCCcccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCeeEE
Q 002932 318 AIEA--LKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEK 395 (864)
Q Consensus 318 l~~~--l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~f~sD~~p~LlaldA~v~l~s~~g~R~ 395 (864)
|+++ +++ .+|.|.+++++|||+||||+||||||||+++|. ||++|+|+||||+|+|.+.+|.|+
T Consensus 81 l~~~~~~~~-----------~~p~L~~a~~~ia~~qiRN~gTiGGnl~~a~p~---sD~~~~L~Al~A~v~l~~~~G~r~ 146 (288)
T 1n62_C 81 LIGSDFLAA-----------KLPIIRETSLLIADPQIRYMGTIGGNAANGDPG---NDMPALMQCLGAAYELTGPEGARI 146 (288)
T ss_dssp HHHCHHHHH-----------HCHHHHHHHTTSSCHHHHHHCBHHHHHHSCCTT---CSHHHHHHHHTCEEEEEETTEEEE
T ss_pred HhcChHHHH-----------HHHHHHHHHHHhCCHHHHccccccchhccCCCc---hHHHHHHHHhCcEEEEEeCCccEE
Confidence 9963 432 589999999999999999999999999999998 999999999999999999999999
Q ss_pred Eehhhhhc---CCCCCCCceEEEEEcCCCCccCCcccCCCcceEEEEEEeccCCCCCccceeeeeEEEEEcCCCCCCCce
Q 002932 396 LMLEEFLE---RPPLDSRSILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIR 472 (864)
Q Consensus 396 vpl~dF~~---~~~l~~~Eii~~I~iP~~~~~~~~~~~~~~~~~~~~~K~~~R~~~~dia~v~~A~~v~~~~~~~~~~~~ 472 (864)
||++|||. ++.|+++|||++|+||.+.. +..+.++|++ | +..|||+||+|+.++++ +++
T Consensus 147 v~~~df~~g~~~t~l~~~eil~~i~ip~~~~----------~~~~~y~k~~-r-r~~d~a~v~~a~~~~~~------~~~ 208 (288)
T 1n62_C 147 VAARDYYQGAYFTAIEPGELLTAIRIPVPPT----------GHGYAYEKLK-R-KIGDYATAAAAVVLTMS------GGK 208 (288)
T ss_dssp EEHHHHEEETTEESCCTTCEEEEEEEECCCT----------TCEEEEEEEC-S-STTCCCSEEEEEEEEEE------TTE
T ss_pred EEHHHHhcCcccccCCCCCEEEEEEeCCCCC----------CCceEEEEeC-C-CccCHhheeEEEEEEEc------CCe
Confidence 99999997 46899999999999998865 3446677887 5 36699999999999997 368
Q ss_pred eeeeEEEEcccCCCcceeHHHHHHHHcCCCCCHHHHHHHHHHHhhcCCCCCCC-CCHHHHhHHHHHHHHHHHHHHhhhh
Q 002932 473 VNNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGT-SIPAYRSSLAVGFLYEFFGSLTEMK 550 (864)
Q Consensus 473 i~~~ria~Ggv~~~~p~ra~~~E~~L~Gk~l~~~~l~~a~~~l~~e~~p~~~~-~sa~YRr~la~~L~~r~l~~~~~~~ 550 (864)
|+++||+|||++++ |+|++++|++|.||.|+++++++|++.+.+++.|.+|. +|++||++|+.+|++|++.++.++.
T Consensus 209 i~~~ria~Ggv~~~-p~ra~~~E~~L~G~~~~~~~~~~a~~~~~~~~~p~~d~r~s~~YR~~l~~~l~~r~l~~~~~~~ 286 (288)
T 1n62_C 209 CVTASIGLTNVANT-PLWAEEAGKVLVGTALDKPALDKAVALAEAITAPASDGRGPAEYRTKMAGVMLRRAVERAKARA 286 (288)
T ss_dssp EEEEEEEEESSSSS-CEECHHHHHHHTTSCCCHHHHHHHHHHHHHHCCCCCBTTBCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEEECCcCc-eEECHHHHHHhcCCCCCHHHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999 99999999999999999999999999999999999987 5999999999999999999988653
No 12
>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B*
Probab=100.00 E-value=8.5e-55 Score=476.41 Aligned_cols=270 Identities=19% Similarity=0.200 Sum_probs=246.1
Q ss_pred CceEEecCCHHHHHHHHhhhcCCCCCcceEEccCccceE-eeec-ccCceeeeCCCCccccceEecCC-cEEecccccHH
Q 002932 240 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGY-YKEV-EHYDKYIDIRYIPELSVIRRDQT-GIEIGATVTIS 316 (864)
Q Consensus 240 ~~~~~~P~tl~eal~ll~~~~~~~~~~a~lvaGgTdl~v-~k~~-~~~~~lIdl~~I~EL~~I~~~~~-~l~IGA~vTl~ 316 (864)
.|+|++|+||+||+++|+ + +++++|||||+|++ +|.+ ..|+.+|||++|+||+.|+.+++ +|+|||+||++
T Consensus 6 ~f~y~~P~sl~ea~~ll~-----~-~~a~~lAGGT~l~~~~k~~~~~p~~lIdi~~i~eL~~I~~~~~~~l~IGA~vt~~ 79 (324)
T 1rm6_B 6 DFRTHRPATLADAVNALA-----A-EATLPLGAGTDLLPNLRRGLGHPAALVDLTGIDGLATISTLADGSLRIGAGATLE 79 (324)
T ss_dssp CCEEECCSSHHHHHHHTT-----S-TTEEEESSCTTHHHHHHTTSCCCSEEEECTTSTTTTCEEECTTSCEEEETTCBHH
T ss_pred ceEEEccCCHHHHHHHHh-----C-CCCEEEECchhHHHHHhccCCCCCEEEECCCChhhcceEECCCCeEEEccCCcHH
Confidence 478999999999999998 3 78999999999998 5665 67999999999999999999765 99999999999
Q ss_pred HHHHHHHHHhhhhhhhhhhhHHHHHHHHHHhccccccCCcccCCcc----------------------------------
Q 002932 317 KAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNL---------------------------------- 362 (864)
Q Consensus 317 ~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI---------------------------------- 362 (864)
+|+++.. ..+.+|.|++++++|||+||||+|||||||
T Consensus 80 ~l~~~~~---------~~~~~p~L~~a~~~ias~qIRN~aTiGGNl~~~~rC~y~~~~~~~k~~g~~c~a~~g~~~~~a~ 150 (324)
T 1rm6_B 80 AIAEHDA---------IRTTWPALAQAAESVAGPTHRAAATLGGNLCQDTRCTFYNQSEWWRSGNGYCLKYKGDKCHVIV 150 (324)
T ss_dssp HHHHCHH---------HHHHSHHHHHHHHHSSCHHHHHHCBHHHHHTCCCBCTTTSSCHHHHHHTTCBTTBBCSCCSSST
T ss_pred HHHhChH---------HHHHHHHHHHHHHHhCCHHHcceeEeeeecccccccccccccccccccCccccccccccceeec
Confidence 9998621 123599999999999999999999999999
Q ss_pred ----ccccCCCCCCchHHHHHhcCcEEEEEeCCeeEEEehhhhhc-----CCCCCCCceEEEEEcCCCCccCCcccCCCc
Q 002932 363 ----VMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEEFLE-----RPPLDSRSILLSVEIPCWDLTRNVTSETNS 433 (864)
Q Consensus 363 ----~~asp~~f~sD~~p~LlaldA~v~l~s~~g~R~vpl~dF~~-----~~~l~~~Eii~~I~iP~~~~~~~~~~~~~~ 433 (864)
|+++|. ||++|+|+||||+|+|.+.+|+|+||++|||. ++.|+++|||++|+||.+ .
T Consensus 151 ~g~~c~a~p~---sD~~~~L~AldA~v~l~~~~g~R~vp~~dF~~~~~~~~t~L~~~Eil~~I~iP~~-~---------- 216 (324)
T 1rm6_B 151 KSDRCYATYH---GDVAPALMVLDARAEIVGPAGKRTVPVAQLFRESGAEHLTLEKGELLAAIEVPPT-G---------- 216 (324)
T ss_dssp TCSSCCCBCC---CSHHHHHHHTTCEEEEEETTEEEEEEGGGGBCSCTTSCBCCCTTCEEEEEEECCC-T----------
T ss_pred ccccccCCCc---chhHHHHHHcCCEEEEEeCCCcEEEEHHHHhcCCccccccCCCCCEEEEEEecCC-C----------
Confidence 588887 99999999999999999999999999999996 468999999999999963 2
Q ss_pred ceEEEEEEeccCCCCCccceeeeeEEEEEcCCCCCCCceeeeeEEEEcccCCCcceeHHHHHHHHcCCCCCHHHHHHHHH
Q 002932 434 VLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIK 513 (864)
Q Consensus 434 ~~~~~~~K~~~R~~~~dia~v~~A~~v~~~~~~~~~~~~i~~~ria~Ggv~~~~p~ra~~~E~~L~Gk~l~~~~l~~a~~ 513 (864)
...+.++|+++| +++|||+||+|+.++++ +++|+++||+|||++++ |+|+ ++|++| ||.|+++++++|.+
T Consensus 217 ~~~~~y~K~~~R-~~~d~a~v~~A~~~~~~------~~~i~~~ria~Ggva~~-p~ra-~~E~~L-G~~~~~~~~~~a~~ 286 (324)
T 1rm6_B 217 AWSAAYSKVRIR-DAVDFPLAGVAAALQRD------GDRIAGLRVAITGSNSA-PLMV-PVDALL-GGNWDDAAAETLAQ 286 (324)
T ss_dssp TCEEEEEEECSS-SSSCCCSEEEEEEEEEE------TTEEEEEEEEEESSSSS-CEEC-CCGGGT-TSCCSHHHHHHHHH
T ss_pred CCceEEEEECcC-CccchhhEEEEEEEEEc------CCcEEEEEEEEEcCCCe-EEeh-HHHHHc-CCCCCHHHHHHHHH
Confidence 345667899999 89999999999999997 36899999999999999 9999 999999 99999999999999
Q ss_pred HHhhcCCCCCCC-CCHHHHhHHHHHHHHHHHHHHhh
Q 002932 514 LLRDSVVPEDGT-SIPAYRSSLAVGFLYEFFGSLTE 548 (864)
Q Consensus 514 ~l~~e~~p~~~~-~sa~YRr~la~~L~~r~l~~~~~ 548 (864)
.+.+++.|.+|. +|++||++|+.+|++|++.++..
T Consensus 287 ~~~~~~~p~~d~r~s~~YR~~la~~l~~r~l~~~~~ 322 (324)
T 1rm6_B 287 LVRKTSNVLRTTITGVKYRRRVLLAISRKVVDQLWE 322 (324)
T ss_dssp HHHHHCCCCTTSSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999987 59999999999999999998864
No 13
>3nvz_C Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3ns1_C* 3etr_C* 3nvv_C* 3nvw_C* 3nrz_C* 3nvy_C* 3eub_C* 3b9j_C* 1fiq_C* 3rca_C* 3sr6_C*
Probab=100.00 E-value=2.3e-55 Score=530.67 Aligned_cols=251 Identities=35% Similarity=0.578 Sum_probs=229.8
Q ss_pred cCCCCcccccccccccccceeccccCCCCCCceEEEEEecCCcCceeccCCCCcCCCCCCEEEEEEcCCCCCCCCCCCCc
Q 002932 602 YPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNIGSK 681 (864)
Q Consensus 602 ~~vG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~ivrSp~a~a~I~~ID~s~A~~~pGVv~vvt~~Dip~~g~n~~~~ 681 (864)
++|||+++|+|+..||||+++|++|++.+|||||++++|||++||+|++||+++|++||||++|+|++|+| +.|.. .
T Consensus 1 ~~iG~~~~R~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~aha~I~siD~s~A~~~pGV~~V~t~~d~p--~~~~~-g 77 (755)
T 3nvz_C 1 DTVGRPLPHLAAAMQASGEAVYCDDIPRYENELFLRLVTSTRAHAKIKSIDVSEAQKVPGFVCFLSADDIP--GSNET-G 77 (755)
T ss_dssp CCTTSCCCCTTHHHHHHTCSCCGGGSCCBTTCEEEEEEECSSSSEEEEEEECTTGGGSTTEEEEECGGGCS--SCSEE-S
T ss_pred CCCCCCCcCcchHHhcccccccccccCCCCCcEEEEEEECCCCCeEEEEeehHHHhcCCCeEEEEEcCCCC--ccccC-C
Confidence 57999999999999999999999999745899999999999999999999999999999999999999998 55531 1
Q ss_pred ccCCCcccccCCceeecCCcEEEEEeCCHHHHHHhcccceEEEecCCCCCccCCHHHHHhcCCCccCCCccccCCCCChh
Q 002932 682 TIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDIS 761 (864)
Q Consensus 682 ~~~~~~p~~a~~~V~y~GqpVa~VvAet~~~A~~Aa~~V~V~y~~e~l~p~v~~~~~Al~~~~~~~~~~~~~~~~~Gd~~ 761 (864)
...++|+|++++|+|+||||++|||+|+|+|++|+++|+|+| |++ |+++|+++|++++++... . ....+||++
T Consensus 78 -~~~~~~~la~~~Vry~Gq~Va~VvA~t~~~A~~Aa~~v~Vey--e~l-p~v~~~~~a~~~~~~~~~-~--~~~~~Gd~~ 150 (755)
T 3nvz_C 78 -LFNDETVFAKDTVTCVGHIIGAVVADTPEHAERAAHVVKVTY--EDL-PAIITIEDAIKNNSFYGS-E--LKIEKGDLK 150 (755)
T ss_dssp -TTSCEESSCCSEECSTTCEEEEEEESSHHHHHHHHHTCEEEE--EEC-CCCCSHHHHHHTTCEEEE-E--EEEEESCHH
T ss_pred -CCCCcccccCCeEEEcCCeEEEEEECCHHHHHHHhcccceEE--EcC-CCCCCHHHHhhccCccCC-C--cccccCCHh
Confidence 346899999999999999999999999999999999999999 888 899999999988764321 1 135789999
Q ss_pred hhcccCCEEEEEEEEEECccccCCCCCCeEEEEEC-CCCcEEEEeCCCChHHHHHHHHHHhCCCCCCEEEEeCCcCCCCC
Q 002932 762 KGMNEADHRILAAEIKLGSQYYFYMETQTALAVPD-EDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFG 840 (864)
Q Consensus 762 ~a~~~a~~vvve~~~~~~~q~H~~mEp~~a~A~~~-~dg~l~V~~stQ~p~~~r~~vA~~Lglp~~kV~V~~~~~GGgFG 840 (864)
++|++|+++ ||++|++++|+|+||||++|+|+|+ ++|+|+||+|||+|+.+|..||++||||++||||+++++|||||
T Consensus 151 ~a~a~A~~v-ve~~y~~~~~~h~~mEp~~~~A~~~~~~g~l~v~~stQ~p~~~r~~lA~~Lglp~~~VrV~~~~vGGgFG 229 (755)
T 3nvz_C 151 KGFSEADNV-VSGELYIGGQDHFYLETHCTIAIPKGEEGEMELFVSTQNAMKTQSFVAKMLGVPVNRILVRVKRMGGGFG 229 (755)
T ss_dssp HHHHHCSEE-EEEEEEECCBCCCCSSCCEEEEEECSSTTCEEEEECCSCHHHHHHHHHHHHTCCGGGEEEEECCCSCCTT
T ss_pred HHhhcCCeE-EEEEEEeCCccccCCCCceEEEEEeCCCCeEEEEECCCCHHHHHHHHHHHHCCCCccEEEEECCCCCCCC
Confidence 999999996 9999999999999999999999998 66789999999999999999999999999999999999999999
Q ss_pred CCCCCChHHHHHHHHHHHHcCCC
Q 002932 841 GKAIKAMPFNIVGATIELLTVYR 863 (864)
Q Consensus 841 gK~~~~~~~~~~aAlaA~~t~~~ 863 (864)
+|.+....+++.||++|+++|||
T Consensus 230 ~K~~~~~~~~~~aa~aA~~~grP 252 (755)
T 3nvz_C 230 GKETRSTLVSVAVALAAYKTGHP 252 (755)
T ss_dssp TTSSTTHHHHHHHHHHHHHHSSC
T ss_pred CcccccchHHHHHHHHHHHhCCC
Confidence 99976555678899999999998
No 14
>1rm6_A 4-hydroxybenzoyl-COA reductase alpha subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.41.1.1 d.133.1.1 PDB: 1sb3_A*
Probab=100.00 E-value=1.1e-54 Score=526.84 Aligned_cols=256 Identities=25% Similarity=0.335 Sum_probs=229.8
Q ss_pred cCCcCCCCcccccccccccccceeccccCCCCCCceEEEEEecCCcCceeccCCCCcCCCCCCEEEEEEcCCCCCCCCCC
Q 002932 599 REYYPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNI 678 (864)
Q Consensus 599 ~~~~~vG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~ivrSp~a~a~I~~ID~s~A~~~pGVv~vvt~~Dip~~g~n~ 678 (864)
+++++|||+++|+|+..||||+++|++|+. +|||||+++||||++||+|++||+++|++||||++|+|++|+| + |.
T Consensus 6 ~~~~~iG~~~~R~d~~~kvtG~a~Y~~D~~-~~gmL~a~~vrSp~aharI~siD~s~A~~~pGV~~V~t~~Dip--~-~~ 81 (769)
T 1rm6_A 6 PQHGTVGVRTPLVDGVEKVTGKAKYTADIA-APDALVGRILRSPHAHARILAIDTSAAEALEGVIAVCTGAETP--V-PF 81 (769)
T ss_dssp ---CCTTSCCCCTTHHHHHHTCCCBGGGCC-CTTCEEEEEEECSSSSEEEEEEECHHHHHSTTEEEEEEGGGCC--S-CB
T ss_pred cccCcCCCCCcCcchHHhccceeeehhccC-CCCCEEEEEEECCCCCeEEEeeehhHHhcCCCeEEEEehHHcC--C-cc
Confidence 457889999999999999999999999996 8999999999999999999999999999999999999999998 4 43
Q ss_pred CCcccCCCcccccCCceeecCCcEEEEEeCCHHHHHHhcccceEEEecCCCCCccCCHHHHHhcCCC--ccC-CCcc---
Q 002932 679 GSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSSL--FEV-PSFL--- 752 (864)
Q Consensus 679 ~~~~~~~~~p~~a~~~V~y~GqpVa~VvAet~~~A~~Aa~~V~V~y~~e~l~p~v~~~~~Al~~~~~--~~~-~~~~--- 752 (864)
+......++|+|++++|+|+|||||+|||+|+|+|++|+++|+|+| |++ |+++|+++|++++++ |+. +.|+
T Consensus 82 g~~~~~~~~~~la~~~Vry~Gq~VA~VvA~t~~~A~~A~~~v~Vey--e~l-p~v~~~~~al~~~a~~~~~~~~~n~~~~ 158 (769)
T 1rm6_A 82 GVLPIAENEYPLARDKVRYRGDPVAAVAAIDEVTAEKALALIKVDY--EVL-PAYMTPKAAMKAGAIALHDDKPNNILRE 158 (769)
T ss_dssp CSSTTCCCBCSSCSSEECSTTCEEEEEEESSHHHHHHHHHHCEEEE--EEC-CCCCSHHHHHSTTCCCSSTTCTTSEEEE
T ss_pred CCCCCCCCcccccCCEEEEcCCeEEEEEECCHHHHHHHhCCCeEEE--eeC-CCCCCHHHHhccCCceeccCCCCccccc
Confidence 3211146889999999999999999999999999999999999999 888 899999999998874 432 1343
Q ss_pred ccCCCCChhhhcccCCEEEEEEEEEECccccCCCCCCeEEEEECC-CCcEEEEeCCCChHHHHHHHHHHhCCCCCCEEEE
Q 002932 753 YPKPVGDISKGMNEADHRILAAEIKLGSQYYFYMETQTALAVPDE-DNCLVVYSSIQCPESAHATIARCLGIPEHNVRVI 831 (864)
Q Consensus 753 ~~~~~Gd~~~a~~~a~~vvve~~~~~~~q~H~~mEp~~a~A~~~~-dg~l~V~~stQ~p~~~r~~vA~~Lglp~~kV~V~ 831 (864)
....+||++++|++|+++ ||++|++++|+|+||||++|+|+|++ ||+|+||+|||+|+.+|..||++||||++||||+
T Consensus 159 ~~~~~Gd~~~a~a~A~~v-ve~~y~~~~~~h~~mEp~~~~A~~~~~~g~l~v~~stQ~p~~~r~~~A~~Lglp~~~VrV~ 237 (769)
T 1rm6_A 159 VHAEFGDVAAAFAEADLI-REKTYTFAEVNHVHMELNATLAEYDPVRDMLTLNTTTQVPYYVHLKVAACLQMDSARIRVI 237 (769)
T ss_dssp EEEEESCHHHHHHTCSEE-EEEEEEECCBCCCCSSCCEEEEEEETTTTEEEEEECCSCHHHHHHHHHHHHTCCGGGEEEE
T ss_pred cccccCChhhhhccCCEE-EEEEEEECCccccCCCCceEEEEEeCCCCeEEEEECCcCHHHHHHHHHHHhCCCHHHEEEE
Confidence 234689999999999996 99999999999999999999999986 6799999999999999999999999999999999
Q ss_pred eCCcCCCCCCCCCCChHHHHHHHHHHHHcCCC
Q 002932 832 TRRVGGAFGGKAIKAMPFNIVGATIELLTVYR 863 (864)
Q Consensus 832 ~~~~GGgFGgK~~~~~~~~~~aAlaA~~t~~~ 863 (864)
++++|||||+|.+... .++.||++|+++|||
T Consensus 238 ~~~vGGgFG~K~~~~~-~~~~aA~~A~~~grP 268 (769)
T 1rm6_A 238 KPFLGGGFGARTEALH-FEIIAGLLARKAKGT 268 (769)
T ss_dssp CCBCCCCTTTTSSCCH-HHHHHHHHHHHHTSE
T ss_pred eCCCCCCCCCcccccc-HHHHHHHHHHHhCCC
Confidence 9999999999998642 477899999999998
No 15
>3hrd_D Nicotinate dehydrogenase small FES subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=100.00 E-value=1.2e-54 Score=425.61 Aligned_cols=152 Identities=36% Similarity=0.646 Sum_probs=143.6
Q ss_pred eeEEEEEECCEEEEEecCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEeecCCCcccCCceeecccccchhhccC
Q 002932 11 RHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNG 90 (864)
Q Consensus 11 ~~~i~~~lNg~~~~~~~~~~~~~Ll~~LR~~~~l~g~K~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~p~~~~~g 90 (864)
+|+|+|+|||++++++ ++|+++|||+||+++||+|+|.||++|.||||||+| ||++|+||++|+.+++|
T Consensus 3 ~~~i~~~vNG~~~~v~-v~p~~tLLd~LR~~lgltgtk~gC~~G~CGACtV~v----------dG~~v~sC~~~~~~~~G 71 (160)
T 3hrd_D 3 KITINLNLNGEARSIV-TEPNKRLLDLLREDFGLTSVKEGCSEGECGACTVIF----------NGDPVTTCCMLAGQADE 71 (160)
T ss_dssp CEEEEEEETTEEEEEE-ECSSSBHHHHHHTTSCCTTSCCSSSSSSSCTTEEEE----------TTEEEEGGGSBGGGGTT
T ss_pred cceEEEEECCEEEEEe-cCCCCCHHHHHHHhcCCCccccccCCCCCCCCEEEE----------CCEEEEchhhhhhhhCC
Confidence 4789999999999997 899999999999999999999999999999999999 79999999999999999
Q ss_pred ceeEEecCCCCCCCCcchHhHHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHHhCCcccc
Q 002932 91 CLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRC 170 (864)
Q Consensus 91 ~~i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtPG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRC 170 (864)
++|+|||||++ ++.|||||+||+++|++|||||||||||++++||++ +|+| |++||+++|+||||||
T Consensus 72 ~~I~TiEgl~~-~~~l~pvq~af~~~~~~QCGfCtpG~ims~~all~~-----~~~p-------t~~eI~~al~GNlCRC 138 (160)
T 3hrd_D 72 STIITLEGVAE-DGKPSLLQQCFLEAGAVQCGYCTPGMILTAKALLDK-----NPDP-------TDEEITVAMSGNLCRC 138 (160)
T ss_dssp EEEECGGGTSB-TTBCCHHHHHHHHHTCCSSCSSHHHHHHHHHHHHTT-----CSSC-------CHHHHHHHHTTCCCSS
T ss_pred CceEEeCCCCC-CCccCHHHHHHHHcCCCcCCcchhhHHHHHHHHHHh-----CCCC-------CHHHHHHHHcCCCCCC
Confidence 99999999986 567999999999999999999999999999999954 4666 6999999999999999
Q ss_pred CCChhHHHHHHHhhhc
Q 002932 171 TGYRPIADACKSFAAD 186 (864)
Q Consensus 171 tgy~~i~~a~~~~~~~ 186 (864)
|||++|++|++.++..
T Consensus 139 tgY~~I~~Av~~aa~~ 154 (160)
T 3hrd_D 139 TGYIKIHAAVRYAVER 154 (160)
T ss_dssp SCSHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHH
Confidence 9999999999998753
No 16
>2w3s_B Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 1jrp_B* 2w3r_B* 1jro_B* 2w54_B* 2w55_B*
Probab=100.00 E-value=7.3e-54 Score=519.60 Aligned_cols=250 Identities=32% Similarity=0.474 Sum_probs=227.5
Q ss_pred CCCCcccccccccccccceeccccCCCCCCceEEEEEecCCcCceeccCCCCcCCCCCCEEEEEEcCCCCCCCCCCCCcc
Q 002932 603 PVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNIGSKT 682 (864)
Q Consensus 603 ~vG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~ivrSp~a~a~I~~ID~s~A~~~pGVv~vvt~~Dip~~g~n~~~~~ 682 (864)
+|||+++|+|+..||||+++|++|++.+|||||+++||||++||+|++||+++|++||||++|+|++|+| +.|. ...
T Consensus 2 ~iG~~~~R~d~~~kvtG~a~Y~~D~~~~~gmL~a~~vrSp~a~a~I~siD~s~A~~~pGV~~V~t~~d~p--~~~~-~g~ 78 (777)
T 2w3s_B 2 SVGKPLPHDSARAHVTGQARYLDDLPCPANTLHLAFGLSTEASAAITGLDLEPVRESPGVIAVFTAADLP--HDND-ASP 78 (777)
T ss_dssp CTTSCCCCTTHHHHHHTCCCCGGGSCCCTTCEEEEEEECSCSSEEEEEEECHHHHTSTTEEEEEEGGGCS--SCCC-CCS
T ss_pred CCCCCCCCcchHHhccccceeccccCCCCCCEEEEEEECCCCCeEEEEeEhHHHhcCCCcEEEEEcccCC--Cccc-CCC
Confidence 5899999999999999999999999547999999999999999999999999999999999999999998 4442 122
Q ss_pred cCCCcccccCCceeecCCcEEEEEeCCHHHHHHhcccceEEEecCCCCCccCCHHHHHhcCC-CccCCCccccCCCCChh
Q 002932 683 IFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSS-LFEVPSFLYPKPVGDIS 761 (864)
Q Consensus 683 ~~~~~p~~a~~~V~y~GqpVa~VvAet~~~A~~Aa~~V~V~y~~e~l~p~v~~~~~Al~~~~-~~~~~~~~~~~~~Gd~~ 761 (864)
...++|+|++++|+|+||||++|||+|+|+|++|+++|+|+| |++ |+++|+++|++++. +.. .. ....+||++
T Consensus 79 ~~~~~~~la~~~Vry~GqpVa~VvA~t~~~A~~Aa~~v~V~y--e~l-p~v~~~~~a~~~~~~~~~-~~--~~~~~Gd~~ 152 (777)
T 2w3s_B 79 APSPEPVLATGEVHFVGQPIFLVAATSHRAARIAARKARITY--APR-PAILTLDQALAADSRFEG-GP--VIWARGDVE 152 (777)
T ss_dssp SSSCCCSSCCSEECSTTCEEEEEEESSHHHHHHHHTTCEEEE--EEC-CCCCSHHHHHHHTCBSSS-SC--EEEEESCHH
T ss_pred CCCCcccccCceEEecCCeEEEEEECCHHHHHHHhcceEEEE--EcC-CCCCCHHHHhhccCcccc-Cc--cccccCChh
Confidence 346899999999999999999999999999999999999999 888 89999999998743 211 11 134689999
Q ss_pred hhcccCCEEEEEEEEEECccccCCCCCCeEEEEECCCCcEEEEeCCCChHHHHHHHHHHhCCCCCCEEEEeCCcCCCCCC
Q 002932 762 KGMNEADHRILAAEIKLGSQYYFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGG 841 (864)
Q Consensus 762 ~a~~~a~~vvve~~~~~~~q~H~~mEp~~a~A~~~~dg~l~V~~stQ~p~~~r~~vA~~Lglp~~kV~V~~~~~GGgFGg 841 (864)
++|++|+++ ||++|++++|+|+||||++|+|+|++|+ |+||+|||+|+.+|..||++||||++||||+++++|||||+
T Consensus 153 ~a~a~A~~v-ve~~y~~~~~~h~~mEp~~~~A~~~~~~-l~v~~stQ~p~~~r~~vA~~Lglp~~~VrV~~~~vGGgFG~ 230 (777)
T 2w3s_B 153 TALAGAAHL-AEGCFEIGGQEHFYLEGQAALALPAEGG-VVIHCSSQHPSEIQHKVAHALGLAFHDVRVEMRRMGGGFGG 230 (777)
T ss_dssp HHHHTCSEE-EEEEEEECCCCCCCSSCCEEEEEEETTE-EEEEESCSCHHHHHHHHHHHHTCCGGGEEEEECCCSCCTTT
T ss_pred HHhhcCCeE-EEEEEEECCccccCCcCCeEEEEEECCc-cEEEECCcCHHHHHHHHHHHHCCCHHHEEEEeCCCCCCCCc
Confidence 999999996 9999999999999999999999999776 99999999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHHcCCC
Q 002932 842 KAIKAMPFNIVGATIELLTVYR 863 (864)
Q Consensus 842 K~~~~~~~~~~aAlaA~~t~~~ 863 (864)
|.+.....++.||++|+++|||
T Consensus 231 K~~~~~~~~~~aA~~A~~~grP 252 (777)
T 2w3s_B 231 KESQGNHLAIACAVAARATGRP 252 (777)
T ss_dssp TTTTTHHHHHHHHHHHHHHSSC
T ss_pred CccccchHHHHHHHHHHHhCCC
Confidence 9976666788999999999998
No 17
>1t3q_B Quinoline 2-oxidoreductase large subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.41.1.1 d.133.1.1
Probab=100.00 E-value=1.1e-53 Score=519.32 Aligned_cols=253 Identities=23% Similarity=0.287 Sum_probs=226.3
Q ss_pred CCCCcccccccccccccceeccccCCCCCCceEEEEEecCCcCceeccCCCCcCCCCCCEEEEEEcCCCCCCCCC--CCC
Q 002932 603 PVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQN--IGS 680 (864)
Q Consensus 603 ~vG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~ivrSp~a~a~I~~ID~s~A~~~pGVv~vvt~~Dip~~g~n--~~~ 680 (864)
.|||+++|+|+..||||+++|++|+. +|||||+++||||++||+|++||+++|++||||++|+|++|+| +.| .+.
T Consensus 13 ~iG~~~~R~d~~~kvtG~a~Y~~D~~-~pgmL~a~~vrSp~aharI~sID~s~A~~~pGV~~V~t~~D~p--~~~~~~~~ 89 (788)
T 1t3q_B 13 SIGTSVLRREDTRLLTGRGRYIADLV-LSGMLHVASLRSPFAHARIVSIDVADAQALPGVELVWCGADVA--ELSQGIVA 89 (788)
T ss_dssp STTSCCCCTTHHHHHTTCCCBGGGCC-CTTCEEEEEEECSSSSEEEEEEECHHHHHSTTEEEEEEHHHHH--TTCCCEEE
T ss_pred cCCCCCcCcchHHhCccceecccccC-CCCCEEEEEEecCCCCEEEEEeEhHHHhhCCCeEEEEeHHHCc--ccccccCc
Confidence 69999999999999999999999996 8999999999999999999999999999999999999999998 433 111
Q ss_pred ccc-----CCCcccccCCceeecCCcEEEEEeCCHHHHHHhcccceEEEecCCCCCccCCHHHHHhcCC-CccC-CCcc-
Q 002932 681 KTI-----FGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSS-LFEV-PSFL- 752 (864)
Q Consensus 681 ~~~-----~~~~p~~a~~~V~y~GqpVa~VvAet~~~A~~Aa~~V~V~y~~e~l~p~v~~~~~Al~~~~-~~~~-~~~~- 752 (864)
... ..+.|+|++++|+|+|||||+|||+|+|+|++|+++|+|+| |++ |+++|+++|+++++ +|+. +.|+
T Consensus 90 ~~~~~~~~~~~~~~la~~~Vry~Gq~VA~VvA~t~~~A~~Aa~~v~Vey--e~l-p~v~~~~~Al~~~a~i~~~~~~n~~ 166 (788)
T 1t3q_B 90 TMQVEGFQTTIQPLLANGVTRFVGEIVAVVVASSRAIAEDAAQLIQVEY--EEL-PAVTGIEAALEGEARANDTLAGNVV 166 (788)
T ss_dssp CCSSTTCCCEEECSSCCSEECSTTCEEEEEEESSHHHHHHHHTTCEEEE--EEC-CCCCSHHHHHHCSCCSCTTSSSSEE
T ss_pred ccccccccCCccccccCCeEEEcCCeEEEEEECCHHHHHHHhCCCeEEE--eeC-CCcCCHHHHhhccCcccCCCCCccc
Confidence 001 12347799999999999999999999999999999999999 888 89999999999876 3442 2343
Q ss_pred --ccCCCCChhhhcccCCEEEEEEEEEECccccCCCCCCeEEEEECC-CCcEEEEeCCCChHHHHHHHHHHhCCCCCCEE
Q 002932 753 --YPKPVGDISKGMNEADHRILAAEIKLGSQYYFYMETQTALAVPDE-DNCLVVYSSIQCPESAHATIARCLGIPEHNVR 829 (864)
Q Consensus 753 --~~~~~Gd~~~a~~~a~~vvve~~~~~~~q~H~~mEp~~a~A~~~~-dg~l~V~~stQ~p~~~r~~vA~~Lglp~~kV~ 829 (864)
.....||++++|++|+++ ||++|++++|+|+||||++|+|+|++ ||+|+||+|||+|+.+|..||++||||++|||
T Consensus 167 ~~~~~~~Gd~~~afa~A~~v-ve~~y~~~~~~h~~mEp~~~~A~~~~~~g~l~v~~stQ~p~~~r~~lA~~Lglp~~~Vr 245 (788)
T 1t3q_B 167 SRTSRARDELAPIFASSAGV-VRGQFSCGRVSACPMETRGAVAQYEWTTQQLILWTATQMPSFVRTMVAMFCAIPEHLIE 245 (788)
T ss_dssp EEEEEEECCCHHHHHHSSEE-EEEEEEECBBCCCCSSCCEEEEEEETTTTEEEEEECCSCHHHHHHHHHHHHTCCGGGEE
T ss_pred cccccccCChhhhhccCCcE-EEEEEEECCEeccCCCCceEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHCCChHHEE
Confidence 234689999999999996 99999999999999999999999986 67999999999999999999999999999999
Q ss_pred EEeCCcCCCCCCCCCCChHHHHHHHHHHHHcCCC
Q 002932 830 VITRRVGGAFGGKAIKAMPFNIVGATIELLTVYR 863 (864)
Q Consensus 830 V~~~~~GGgFGgK~~~~~~~~~~aAlaA~~t~~~ 863 (864)
|+++++|||||+|.+.. ..++.||++|+++|||
T Consensus 246 V~~~~vGGgFG~K~~~~-~~~~~aA~~A~~~grP 278 (788)
T 1t3q_B 246 VRVPDVGGGFGQKAHLH-PEELLVCLLSRALGRP 278 (788)
T ss_dssp EECCBCSCCTTTTSSCC-HHHHHHHHHHHHHTSC
T ss_pred EEeCCCCCCCCCCCccc-hHHHHHHHHHHHhCCC
Confidence 99999999999999864 3477899999999998
No 18
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C*
Probab=100.00 E-value=2.7e-52 Score=452.11 Aligned_cols=273 Identities=20% Similarity=0.267 Sum_probs=249.3
Q ss_pred CceEEecCCHHHHHHHHhhhcCCCCCcceEEccCccceEe-eec-ccCceeeeCCCCccccceEecCCcEEecccccHHH
Q 002932 240 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYY-KEV-EHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISK 317 (864)
Q Consensus 240 ~~~~~~P~tl~eal~ll~~~~~~~~~~a~lvaGgTdl~v~-k~~-~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~ 317 (864)
.|+|++|+|++|++++++++ .+++++++|||+|+++ +.+ ..+..+|||++|+||+.|+.++++|+|||+||+++
T Consensus 5 ~~~~~~P~s~~ea~~ll~~~----~~~~~ilaGGT~ll~~~~~~~~~~~~lIdl~~i~eL~~i~~~~~~l~iGA~~tl~~ 80 (287)
T 1ffv_C 5 RFEYHAPKSVGEAVALLGQL----GSDAKLLAGGHSLLPMMKLRFAQPEHLIDINRIPELRGIREEGSTVVIGAMTVEND 80 (287)
T ss_dssp CCEEECCSSHHHHHHHHHHH----GGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEEETTEEEEETTCBHHH
T ss_pred cceEECCCCHHHHHHHHHhc----CCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcceEecCCEEEEccCCcHHH
Confidence 47899999999999999853 3789999999999994 665 56899999999999999999999999999999999
Q ss_pred HHHH--HHHHhhhhhhhhhhhHHHHHHHHHHhccccccCCcccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCeeEE
Q 002932 318 AIEA--LKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEK 395 (864)
Q Consensus 318 l~~~--l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~f~sD~~p~LlaldA~v~l~s~~g~R~ 395 (864)
|.++ +++ .+|.|.++++++||+||||+|||||||++++|. +|++++|+||||+|++.+.+|.|+
T Consensus 81 l~~~~~~~~-----------~~~~L~~a~~~~a~~qiRN~gTvGGni~~~~~~---~D~~~~l~Al~A~v~~~~~~G~r~ 146 (287)
T 1ffv_C 81 LISSPIVQA-----------RLPLLAEAAKLIADPQVRNRGTIGGDIAHGDPG---NDHPALSIAVEAHFVLEGPNGRRT 146 (287)
T ss_dssp HHHCHHHHH-----------HCHHHHHHGGGSSCTTGGGTCBHHHHHHTCCTT---CSHHHHHHHTTCEEEEEETTEEEE
T ss_pred HhhChHHHH-----------HhHHHHHHHHHhCCHHHhcceechhhhccCCCc---HHHHHHHHHcCcEEEEEcCCceEE
Confidence 9973 432 589999999999999999999999999999998 999999999999999999999999
Q ss_pred Eehhhhhc---CCCCCCCceEEEEEcCCCCccCCcccCCCcceEEEEEEeccCCCCCccceeeeeEEEEEcCCCCCCCce
Q 002932 396 LMLEEFLE---RPPLDSRSILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIR 472 (864)
Q Consensus 396 vpl~dF~~---~~~l~~~Eii~~I~iP~~~~~~~~~~~~~~~~~~~~~K~~~R~~~~dia~v~~A~~v~~~~~~~~~~~~ 472 (864)
+|++|||. ++.|+++|||++|.||.+.. +..+.++|++ | ++.|||+||+|+.++++ +++
T Consensus 147 i~~~df~~g~~~t~l~~~eii~~i~ip~~~~----------~~~~~~~k~~-r-r~~d~a~v~~a~~~~~~------~~~ 208 (287)
T 1ffv_C 147 VPADGFFLGTYMTLLEENEVMVEIRVPAFAQ----------GTGWAYEKLK-R-KTGDWATAGCAVVMRKS------GNT 208 (287)
T ss_dssp EESTTTEEETTEESCCTTCEEEEEEEECCCT----------TCEEEEEEEC-S-STTSCCSEEEEEEEEEE------TTE
T ss_pred EEHHHHhcCcccccCCCCCEEEEEEecCCCC----------CCceEEEEEC-C-cccchhheEEEEEEEEc------CCe
Confidence 99999997 46899999999999998865 3456677887 4 35699999999999997 368
Q ss_pred eeeeEEEEcccCCCcceeHHHHHHHHcCCCCCHHHHHHHHHHHhhcCCCCCCC-CCHHHHhHHHHHHHHHHHHHHhhh
Q 002932 473 VNNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGT-SIPAYRSSLAVGFLYEFFGSLTEM 549 (864)
Q Consensus 473 i~~~ria~Ggv~~~~p~ra~~~E~~L~Gk~l~~~~l~~a~~~l~~e~~p~~~~-~sa~YRr~la~~L~~r~l~~~~~~ 549 (864)
|+++||+|||++++ |+|++++|++|.||+|+++++++|++.+.+++.|.+|. +|++||++|+.+|++|++.++.++
T Consensus 209 i~~~ria~Ggv~~~-p~ra~~~E~~L~G~~~~~~~~~~a~~~~~~~~~p~~d~r~s~~YR~~l~~~l~~r~l~~~~~~ 285 (287)
T 1ffv_C 209 VSHIRIALTNVAPT-ALRAEAAEAALLGKAFTKEAVQAAADAAIAICEPAEDLRGDADYKTAMAGQMVKRALNAAWAR 285 (287)
T ss_dssp EEEEEEEEESSSSS-CEECHHHHHTTBTSBCCHHHHHHHHHHHHHTCCCCCBTTBCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEEcccCC-cccCHHHHHHhcCCCCCHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999 99999999999999999999999999999999999987 599999999999999999998764
No 19
>1ffv_B CUTL, molybdoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.41.1.1 d.133.1.1 PDB: 1ffu_B*
Probab=100.00 E-value=1.9e-53 Score=517.53 Aligned_cols=254 Identities=22% Similarity=0.235 Sum_probs=226.7
Q ss_pred cCCCCcccccccccccccceeccccCCCCCCceEEEEEecCCcCceeccCCCCcCCCCCCEEEEEEcCCCCCCCCCCCCc
Q 002932 602 YPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNIGSK 681 (864)
Q Consensus 602 ~~vG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~ivrSp~a~a~I~~ID~s~A~~~pGVv~vvt~~Dip~~g~n~~~~ 681 (864)
+.|||+++|+|+..||||+++|++|++ +|||||+++||||++||+|++||+++|++||||++|+|++|+| +.+.+..
T Consensus 16 ~~iG~~~~R~d~~~kvtG~a~Y~~D~~-~pgmL~a~~vrSp~aharI~sID~s~A~~~PGV~~V~t~~D~p--~~~~~~~ 92 (803)
T 1ffv_B 16 AGMGASRLRKEDARFIQGKGNYVDDIK-MPGMLHMDIVRAPIAHGRIKKIHKDAALAMPGVHAVLTAEDLK--PLKLHWM 92 (803)
T ss_dssp TCTTCCCCCSSHHHHTTTCCCCGGGCC-CTTCEEEEEEECSSSSEEEEEEECHHHHHSTTEEEEECHHHHG--GGTCSEE
T ss_pred ccCCCCCcCcChHhhcccceecccccC-CCCCEEEEEEeCCCCCeEEEEeehHHHhcCCCeEEEEehhhcc--Ccccccc
Confidence 569999999999999999999999997 7999999999999999999999999999999999999999998 3222211
Q ss_pred c--cCCCcccccCCceeecCCcEEEEEeCCHHHHHHhcccceEEEecCCCCCccCCHHHHHhcCC--CccC-CC------
Q 002932 682 T--IFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSS--LFEV-PS------ 750 (864)
Q Consensus 682 ~--~~~~~p~~a~~~V~y~GqpVa~VvAet~~~A~~Aa~~V~V~y~~e~l~p~v~~~~~Al~~~~--~~~~-~~------ 750 (864)
. ...++|+|++++|+|+|||||+|||+|+|+|++|+++|+|+| |++ |+++|+++|+++++ +|+. +.
T Consensus 93 ~~~~~~~~~~la~~~Vry~Gq~VA~VvA~t~~~A~~Aa~~v~Vey--e~l-p~v~~~~~Al~~~a~~i~~~~~~~~~~~~ 169 (803)
T 1ffv_B 93 PTLAGDVAAVLADEKVHFQMQEVAIVIADDRYIAADAVEAVKVEY--DEL-PVVIDPIDALKPDAPVLREDLAGKTSGAH 169 (803)
T ss_dssp ECTTSCEEESSCCSEECSTTCEEEEEEESSHHHHHHHHHHCEEEE--EEC-CCCCCHHHHTSTTCCCSCGGGTTCCEETT
T ss_pred cccCCCccccccCceEEEcCCcEEEEEECCHHHHHHHhcCCEEEE--eeC-CccCCHHHHhhcCCceecccccccccccc
Confidence 0 123678999999999999999999999999999999999999 888 89999999999876 3442 12
Q ss_pred ------cc---ccCCC-CChhhhcccCCEEEEEEEEEECccccCCCCCCeEEEEECC-CCcEEEEeCCCChHHHHHHHHH
Q 002932 751 ------FL---YPKPV-GDISKGMNEADHRILAAEIKLGSQYYFYMETQTALAVPDE-DNCLVVYSSIQCPESAHATIAR 819 (864)
Q Consensus 751 ------~~---~~~~~-Gd~~~a~~~a~~vvve~~~~~~~q~H~~mEp~~a~A~~~~-dg~l~V~~stQ~p~~~r~~vA~ 819 (864)
|+ ....+ ||++++|++|+++ ||++|++++|+|+||||++|+|+|++ ||+|+||+|||+|+.+|..||+
T Consensus 170 ~~~~~~n~~~~~~~~~~Gd~~~afa~A~~v-ve~~y~~~~~~h~~mEp~~~~A~~~~~~g~l~v~~stQ~p~~~r~~lA~ 248 (803)
T 1ffv_B 170 GPREHHNHIFTWGAGDKAATDAVFANAPVT-VSQHMYYPRVHPCPLETCGCVASFDPIKGDLTTYITSQAPHVVRTVVSM 248 (803)
T ss_dssp EECSSTTEEEEEEEECHHHHHHHHHHCSEE-EEEEEEECCBCCCCSSCCEEEEEEETTTTEEEEEECCSCHHHHHHHHHH
T ss_pred cccccccccccccccccCChhhhhccCCEE-EEEEEEECCEeccCCCCceEEEEEeCCCceEEEEECCCCHHHHHHHHHH
Confidence 43 12357 9999999999996 99999999999999999999999985 6799999999999999999999
Q ss_pred HhCCCCCCEEEEeCCcCCCCCCCCCCChHHHHHHHHHHHHcCCC
Q 002932 820 CLGIPEHNVRVITRRVGGAFGGKAIKAMPFNIVGATIELLTVYR 863 (864)
Q Consensus 820 ~Lglp~~kV~V~~~~~GGgFGgK~~~~~~~~~~aAlaA~~t~~~ 863 (864)
+||||++||||+++++|||||+|... ....+.||++|+++|||
T Consensus 249 ~Lglp~~~VrV~~~~vGGgFG~K~~~-~~~~~~aa~~A~~~grP 291 (803)
T 1ffv_B 249 LSGIPESKVRIVSPDIGGGFGNKVGI-YPGYVCAIVASIVLGRP 291 (803)
T ss_dssp HHCCCGGGEEEECCCCSCCTTTTSSC-CHHHHHHHHHHHHHTSC
T ss_pred HhCCCHHHEEEEeCCCCCCCCccccc-cHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999875 34456799999999998
No 20
>1n62_B Carbon monoxide dehydrogenase large chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.41.1.1 d.133.1.1 PDB: 1n5w_B* 1n61_B* 1n60_B* 1n63_B* 1zxi_B*
Probab=100.00 E-value=2.1e-53 Score=518.14 Aligned_cols=254 Identities=23% Similarity=0.276 Sum_probs=226.9
Q ss_pred cCCCCcccccccccccccceeccccCCCCCCceEEEEEecCCcCceeccCCCCcCCCCCCEEEEEEcCCCCCCCCCCCCc
Q 002932 602 YPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNIGSK 681 (864)
Q Consensus 602 ~~vG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~ivrSp~a~a~I~~ID~s~A~~~pGVv~vvt~~Dip~~g~n~~~~ 681 (864)
+.|||+++|+|+..||||+++|++|++ +|||||+++||||++||+|++||+++|++||||++|+|++|+| +.|....
T Consensus 19 ~~iG~~~~R~d~~~kvtG~a~Y~~D~~-~pgmL~a~~vrSp~aha~I~sID~s~A~~~PGV~~V~t~~D~p--~~~~~~~ 95 (809)
T 1n62_B 19 QGMGCKRKRVEDIRFTQGKGNYVDDVK-LPGMLFGDFVRSSHAHARIKSIDTSKAKALPGVFAVLTAADLK--PLNLHYM 95 (809)
T ss_dssp TCTTCCCCCTHHHHHTTTCCCBGGGCC-CTTCEEEEEEECSCSSEEEEEEECHHHHHSTTEEEEEEHHHHG--GGTCSEE
T ss_pred ccCCCCCcCcchHHhccceeeehhhcC-CCCCEEEEEEeCCCCceEEEecchHHHhhCCCeEEEEEhHHcc--ccccccc
Confidence 359999999999999999999999997 7999999999999999999999999999999999999999998 4432111
Q ss_pred c--cCCCcccccCCceeecCCcEEEEEeCCHHHHHHhcccceEEEecCCCCCccCCHHHHHhcCC--CccC-CC------
Q 002932 682 T--IFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSS--LFEV-PS------ 750 (864)
Q Consensus 682 ~--~~~~~p~~a~~~V~y~GqpVa~VvAet~~~A~~Aa~~V~V~y~~e~l~p~v~~~~~Al~~~~--~~~~-~~------ 750 (864)
. ...++|+|++++|+|+|||||+|||+|+|+|++|+++|+|+| |++ |+++|+++|+++++ +|+. +.
T Consensus 96 ~~~~~~~~~~la~~~Vry~Gq~VA~VvA~t~~~A~~Aa~~v~Vey--e~l-p~v~~~~~Al~~~a~~i~~~~~~~~~~~~ 172 (809)
T 1n62_B 96 PTLAGDVQAVLADEKVLFQNQEVAFVVAKDRYVAADAIELVEVDY--EPL-PVLVDPFKAMEPDAPLLREDIKDKMTGAH 172 (809)
T ss_dssp ECTTSSEEESSCSSEECSTTCEEEEEEESSHHHHHHHHHHCEEEE--EEC-CCCCCGGGTTSTTCCCCCGGGTTCCEETT
T ss_pred cccCCCCcccccCceEEEcCCcEEEEEECCHHHHHHHhCcceEEE--EeC-CCcCCHHHHhhcCCceecccccccccccc
Confidence 1 114679999999999999999999999999999999999999 888 99999999999876 3442 12
Q ss_pred ------cc---ccCCC-CChhhhcccCCEEEEEEEEEECccccCCCCCCeEEEEECC-CCcEEEEeCCCChHHHHHHHHH
Q 002932 751 ------FL---YPKPV-GDISKGMNEADHRILAAEIKLGSQYYFYMETQTALAVPDE-DNCLVVYSSIQCPESAHATIAR 819 (864)
Q Consensus 751 ------~~---~~~~~-Gd~~~a~~~a~~vvve~~~~~~~q~H~~mEp~~a~A~~~~-dg~l~V~~stQ~p~~~r~~vA~ 819 (864)
|+ ....+ ||++++|++|+++ ||++|++++|+|+||||++|+|+|++ ||+|+||+|||+|+.+|..||+
T Consensus 173 ~~~~~~n~~~~~~~~~~Gd~~~afa~A~~v-ve~~y~~~~~~h~~mEp~~~~A~~~~~~g~l~v~~stQ~p~~~r~~~A~ 251 (809)
T 1n62_B 173 GARKHHNHIFRWEIGDKEGTDATFAKAEVV-SKDMFTYHRVHPSPLETCQCVASMDKIKGELTLWGTFQAPHVIRTVVSL 251 (809)
T ss_dssp EECSSTTEEEEEEEECHHHHHHHHHHCSEE-EEEEEEECCBCCCCSSCCEEEEEEETTTTEEEEEECCSSHHHHHHHHHH
T ss_pred cccccccccccccccccCChhhhhccCCEE-EEEEEEECCEeccCCCCceEEEEEeCCCCeEEEEECCcChHHHHHHHHH
Confidence 43 12357 9999999999996 99999999999999999999999985 6799999999999999999999
Q ss_pred HhCCCCCCEEEEeCCcCCCCCCCCCCChHHHHHHHHHHHHcCCC
Q 002932 820 CLGIPEHNVRVITRRVGGAFGGKAIKAMPFNIVGATIELLTVYR 863 (864)
Q Consensus 820 ~Lglp~~kV~V~~~~~GGgFGgK~~~~~~~~~~aAlaA~~t~~~ 863 (864)
+||||++||||+++++|||||+|... ....+.||++|+++|||
T Consensus 252 ~Lglp~~~VrV~~~~vGGgFG~K~~~-~~~~~~aA~~A~~~grP 294 (809)
T 1n62_B 252 ISGLPEHKIHVIAPDIGGGFGNKVGA-YSGYVCAVVASIVLGVP 294 (809)
T ss_dssp HHCCCGGGEEEECCBCSCCTTTTSSC-CHHHHHHHHHHHHHSSC
T ss_pred HhCCCHHHEEEEeCCCCCCCcccccc-chHHHHHHHHHHHhCCC
Confidence 99999999999999999999999875 34356799999999998
No 21
>1ffv_A CUTS, iron-sulfur protein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: a.56.1.1 d.15.4.2 PDB: 1ffu_A*
Probab=100.00 E-value=1e-51 Score=407.32 Aligned_cols=152 Identities=38% Similarity=0.728 Sum_probs=143.2
Q ss_pred eeEEEEEECCEEEEEecCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEeecCCCcccCCceeecccccchhhccC
Q 002932 11 RHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNG 90 (864)
Q Consensus 11 ~~~i~~~lNg~~~~~~~~~~~~~Ll~~LR~~~~l~g~K~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~p~~~~~g 90 (864)
.++|+|+|||++++++ ++|+++|||+||++++++|+|.||++|.||||||+| ||++|+||++|+.+++|
T Consensus 3 ~~~i~~~vNG~~~~~~-v~~~~tLLd~LR~~lgltg~k~gC~~G~CGaCtV~v----------dG~~v~sC~~~~~~~~G 71 (163)
T 1ffv_A 3 KKIITVNVNGKAQEKA-VEPRTLLIHFLREELNLTGAHIGCETSHCGACTVDI----------DGRSVKSCTHLAVQCDG 71 (163)
T ss_dssp CEEEEEEETTEEEEEE-ECTTCBHHHHHHHTSCCTTSCCCCSSSCSCTTEEEE----------TTEEEEGGGSBGGGGTT
T ss_pred CceEEEEECCEEEEEe-cCCCCcHHHHHHhcCCCcccccCCCCCCCCCCEEEE----------CCcEecchHhhHHHhCC
Confidence 3589999999999997 799999999999999999999999999999999999 79999999999999999
Q ss_pred ceeEEecCCCCCCCCcchHhHHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHHhCCcccc
Q 002932 91 CLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRC 170 (864)
Q Consensus 91 ~~i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtPG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRC 170 (864)
++|+|||||++ .+.+||+|++|+++|++|||||||||||++++||++ +|+| |++||+++|+||||||
T Consensus 72 ~~I~TiEgL~~-~~~l~pvq~a~~~~~~~QCG~CtpG~imsa~all~~-----~~~p-------t~~ei~~~l~gnlCRC 138 (163)
T 1ffv_A 72 SEVLTVEGLAN-KGVLHAVQEGFYKEHGLQCGFCTPGMLMRAYRFLQE-----NPNP-------TEAEIRMGMTGNLCRC 138 (163)
T ss_dssp CEEECGGGTSB-TTBCCHHHHHHHHTTCCSSCSSHHHHHHHHHHHHHH-----CSSC-------CHHHHHHHTTTCCCSS
T ss_pred ceEEEECCCCC-CCCcCHHHHHHHHhCCccCccccHhHHHHHHHHHHc-----CCCC-------CHHHHHHHHcCCccCC
Confidence 99999999986 578999999999999999999999999999999965 3555 6999999999999999
Q ss_pred CCChhHHHHHHHhhhc
Q 002932 171 TGYRPIADACKSFAAD 186 (864)
Q Consensus 171 tgy~~i~~a~~~~~~~ 186 (864)
|||++|++|++.++..
T Consensus 139 tgY~~I~~Av~~~a~~ 154 (163)
T 1ffv_A 139 TGYQNIVKAVQYAARK 154 (163)
T ss_dssp SCSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH
Confidence 9999999999998753
No 22
>1n62_A Carbon monoxide dehydrogenase small chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: a.56.1.1 d.15.4.2 PDB: 1n5w_A* 1n61_A* 1n60_A* 1n63_A* 1zxi_A*
Probab=100.00 E-value=1.4e-51 Score=407.44 Aligned_cols=153 Identities=37% Similarity=0.724 Sum_probs=143.4
Q ss_pred eeEEEEEECCEEEEEecCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEeecCCCcccCCceeecccccchhhccC
Q 002932 11 RHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNG 90 (864)
Q Consensus 11 ~~~i~~~lNg~~~~~~~~~~~~~Ll~~LR~~~~l~g~K~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~p~~~~~g 90 (864)
.|+|+|+|||+.++++ ++|+++|||+||+.++++|+|.||++|.||+|||+| ||++|+||++|+.+++|
T Consensus 3 ~~~i~~~vNG~~~~~~-v~~~~tLLd~LR~~lgl~g~k~gC~~G~CGaCtV~v----------dG~~v~SC~~~~~~~~G 71 (166)
T 1n62_A 3 KAHIELTINGHPVEAL-VEPRTLLIHFIREQQNLTGAHIGCDTSHCGACTVDL----------DGMSVKSCTMFAVQANG 71 (166)
T ss_dssp CEEEEEEETTEEEEEE-ECTTCBHHHHHHHTSCCTTSCCCCSSSCSCTTEEEE----------TTEEEEGGGSBGGGGTT
T ss_pred CceEEEEECCEEEEEe-cCCCCcHHHHHHHcCCCCccccCCCCCCCCCCEEEE----------CCcEEechhhhHHHhCC
Confidence 3689999999999997 799999999999999999999999999999999999 79999999999999999
Q ss_pred ceeEEecCCCCCCCCcchHhHHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHHhCCcccc
Q 002932 91 CLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRC 170 (864)
Q Consensus 91 ~~i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtPG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRC 170 (864)
++|+|||||++.++.+||+|++|+++|++|||||||||||++++||++ +|+| |++||+++|+||||||
T Consensus 72 ~~V~TiEgL~~~~~~~~pvq~a~~~~~~~QCG~CtpG~imsa~all~~-----~~~p-------t~~eI~~~l~gNlCRC 139 (166)
T 1n62_A 72 ASITTIEGMAAPDGTLSALQEGFRMMHGLQCGYCTPGMIMRSHRLLQE-----NPSP-------TEAEIRFGIGGNLCRC 139 (166)
T ss_dssp CEEECGGGSSCTTSCCCHHHHHHHHTTCCSSCSSHHHHHHHHHHHHHH-----CSSC-------CHHHHHHHTTTCCCSS
T ss_pred ceEEEeCCCCCcCCccCHHHHHHHHcCCccCCccchhHHHHHHHHHHc-----CCCC-------CHHHHHHHHcCCccCC
Confidence 999999999853467999999999999999999999999999999965 3555 6999999999999999
Q ss_pred CCChhHHHHHHHhhhc
Q 002932 171 TGYRPIADACKSFAAD 186 (864)
Q Consensus 171 tgy~~i~~a~~~~~~~ 186 (864)
|||++|++|++.++..
T Consensus 140 tgY~~I~~Av~~~a~~ 155 (166)
T 1n62_A 140 TGYQNIVKAIQYAAAK 155 (166)
T ss_dssp STTHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH
Confidence 9999999999998753
No 23
>1rm6_C 4-hydroxybenzoyl-COA reductase gamma subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: a.56.1.1 d.15.4.2 PDB: 1sb3_C*
Probab=100.00 E-value=5.4e-47 Score=374.57 Aligned_cols=153 Identities=37% Similarity=0.639 Sum_probs=143.5
Q ss_pred ceeEEEEEECCEEEEEecCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEeecCCCcccCCceeecccccchhhcc
Q 002932 10 TRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVN 89 (864)
Q Consensus 10 ~~~~i~~~lNg~~~~~~~~~~~~~Ll~~LR~~~~l~g~K~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~p~~~~~ 89 (864)
++++|+|+|||++++++ ++|++|||++||+.++++|+|.||++|.||+|||+| ||++++||++|+..++
T Consensus 1 m~~~i~~~vNG~~~~v~-~~~~~tLL~~Lr~~~gl~g~k~gC~~G~CGaCtV~v----------dG~~v~sC~~~~~~~~ 69 (161)
T 1rm6_C 1 MKNILRLTLNGRAREDL-VPDNMLLLDYLRETVGLTGTKQGCDGGECGACTVLV----------DDRPRLACSTLAHQVA 69 (161)
T ss_dssp CEEEEEEEETTEEEEEE-EETTCBHHHHHHHTTCCTTSCCCSSSSSSCTTEEEE----------TTEEEEGGGSBGGGGT
T ss_pred CCceEEEEECCEEEEEe-cCCcCcHHHHHHHcCCCcccccCCCCCCCCCCEEEE----------CCcEEechHHHHHHhC
Confidence 35689999999999997 799999999999999999999999999999999999 7999999999999999
Q ss_pred CceeEEecCCCCCCCCcchHhHHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHHhCCccc
Q 002932 90 GCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCR 169 (864)
Q Consensus 90 g~~i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtPG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCR 169 (864)
|++|+|||||++ .+.+||+|++|+++|+.|||||||||||++|+||+++ |+| |+++|+++|+|||||
T Consensus 70 G~~v~TiEgL~~-~~~~~p~q~a~~~~~~~qCG~Ctpg~im~a~~ll~~~-----~~p-------t~~~i~~~l~gnlcR 136 (161)
T 1rm6_C 70 GKKVETVESLAT-QGTLSKLQAAFHEKLGTQCGFCTPGMIMASEALLRKN-----PSP-------SRDEIKAALAGNLCR 136 (161)
T ss_dssp TSEEECGGGSSB-TTBCCHHHHHHHHHTCCSSCSSHHHHHHHHHHHHHHC-----SSC-------CHHHHHHHTTTCCCS
T ss_pred CceEEEECCCCC-CCccCHHHHHHHHhCCCcCCCCchHHHHHHHHHHhcC-----CCC-------CHHHHHHHHcCCeEC
Confidence 999999999986 5679999999999999999999999999999999653 555 699999999999999
Q ss_pred cCCChhHHHHHHHhhhc
Q 002932 170 CTGYRPIADACKSFAAD 186 (864)
Q Consensus 170 Ctgy~~i~~a~~~~~~~ 186 (864)
||||++|++|++.++..
T Consensus 137 Ctgy~~i~~A~~~~~~~ 153 (161)
T 1rm6_C 137 CTGYVKIIKSVETAAAA 153 (161)
T ss_dssp SSCSHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHH
Confidence 99999999999998753
No 24
>1t3q_A Quinoline 2-oxidoreductase small subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: a.56.1.1 d.15.4.2
Probab=100.00 E-value=1.8e-42 Score=345.57 Aligned_cols=153 Identities=37% Similarity=0.705 Sum_probs=143.0
Q ss_pred CceeEEEEEECCEEEEEecCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEeecCCCcccCCceeecccccchhhc
Q 002932 9 GTRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSV 88 (864)
Q Consensus 9 ~~~~~i~~~lNg~~~~~~~~~~~~~Ll~~LR~~~~l~g~K~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~p~~~~ 88 (864)
++.|.|+|+|||+.++++ ++|++|||++||+.+|++|+|.||++|.||+|+|+| +|++++||++|+..+
T Consensus 7 ~~~m~i~~~ing~~~~~~-v~~~~tlL~~Lr~~~gl~g~~~~C~~G~CGaC~V~v----------dG~~v~sC~~~~~~~ 75 (168)
T 1t3q_A 7 SQLMRISATINGKPRVFY-VEPRMHLADALREVVGLTGTKIGCEQGVCGSCTILI----------DGAPMRSCLTLAVQA 75 (168)
T ss_dssp CCCEEEEEEETTEEEEEE-ECTTSBHHHHHHHTTCCTTSCCSCSSSSSCTTEEEE----------TTEEEEGGGSBGGGG
T ss_pred CCcceEEEEECCEEEEEe-cCCCCcHHHHHHhcCCCCccccCCCCCCCCCcEEEE----------CCCEeechhhHHHHh
Confidence 467889999999999997 799999999999989999999999999999999999 799999999999999
Q ss_pred cCceeEEecCCCCCCCCcchHhHHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHHhCCcc
Q 002932 89 NGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLC 168 (864)
Q Consensus 89 ~g~~i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtPG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlC 168 (864)
+|++|+|||||++ ...+||+|++|+++|+.|||||+|||+|++++||.++ |+| ++++|+++|+||+|
T Consensus 76 ~G~~v~Tiegl~~-~~~~~~~q~a~~~~~~~qCG~C~pg~i~~a~~ll~~~-----~~p-------~~~~i~~~l~gnlc 142 (168)
T 1t3q_A 76 EGCSIETVEGLSQ-GEKLNALQDSFRRHHALQCGFCTAGMLATARSILAEN-----PAP-------SRDEVREVMSGNLC 142 (168)
T ss_dssp TTCEEECGGGTCC-SSSCCHHHHHHHHTTCCSSCSSHHHHHHHHHHHHHHC-----SSC-------CHHHHHHHGGGSCC
T ss_pred CCCeEEEEcCCCC-ccccCHHHHHHHHhCCCcCCCchHHHHHHHHHHHhcC-----CCC-------CHHHHHHHHcCCcc
Confidence 9999999999986 5679999999999999999999999999999999543 455 58999999999999
Q ss_pred ccCCChhHHHHHHHhhh
Q 002932 169 RCTGYRPIADACKSFAA 185 (864)
Q Consensus 169 RCtgy~~i~~a~~~~~~ 185 (864)
|||+|++|++|++.++.
T Consensus 143 RCt~y~~~v~A~~~~~~ 159 (168)
T 1t3q_A 143 RCTGYETIIDAITDPAV 159 (168)
T ss_dssp SSSCSHHHHHHHTCHHH
T ss_pred cCCCchHHHHHHHHHHH
Confidence 99999999999998764
No 25
>3vr8_B Iron-sulfur subunit of succinate dehydrogenase; membrane protein, reductase, mitochondria MEMB oxidoreductase; HET: FAD HEM RQX EPH; 2.81A {Ascaris suum} PDB: 3vrb_B*
Probab=98.92 E-value=9e-10 Score=117.88 Aligned_cols=69 Identities=23% Similarity=0.392 Sum_probs=60.1
Q ss_pred EEEEEecCCC-CCcHHHHHhh---ccC-CcccccCCCCCCCCccEEEEeecCCCcccCCceeecccccchhhccCceeEE
Q 002932 21 EKFEVSSVDP-STTLLEFLRY---HTR-FKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLITT 95 (864)
Q Consensus 21 ~~~~~~~~~~-~~~Ll~~LR~---~~~-l~g~K~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~p~~~~~g~~i~T 95 (864)
+.++++ +++ ++||||+||+ +++ .+++|.||++|.||+|+|.| ||+++.||++++....| .++|
T Consensus 55 ~~~~v~-v~~~~~tlLdaL~~i~~~~~ptl~~~~~C~~G~CGsC~V~I----------nG~~~laC~t~v~~~~~-~~~t 122 (282)
T 3vr8_B 55 QKFDVD-LDKCGTMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNI----------AGENTLACICNIDQNTS-KTTK 122 (282)
T ss_pred EEEEEE-eCCCCCcHHHHHHhcCcccCCceeecCCCCCCCCCCCEEEE----------CCEEecchhhhHhHhcC-CcEE
Confidence 467776 677 9999999996 334 48999999999999999999 89999999999987666 7999
Q ss_pred ecCCCC
Q 002932 96 SEGLGN 101 (864)
Q Consensus 96 vEgl~~ 101 (864)
||||.+
T Consensus 123 IepL~~ 128 (282)
T 3vr8_B 123 IYPLPH 128 (282)
T ss_pred eccCCC
Confidence 999975
No 26
>2wdq_B Succinate dehydrogenase iron-sulfur subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_B* 2acz_B* 1nek_B* 2wdr_B* 2wdv_B* 2ws3_B* 2wu2_B* 2wu5_B* 2wp9_B*
Probab=98.87 E-value=2.5e-09 Score=112.26 Aligned_cols=68 Identities=21% Similarity=0.284 Sum_probs=61.1
Q ss_pred EEEEEecCCC--CCcHHHHHhhcc---CCcccccCCCCCCCCccEEEEeecCCCcccCCceeecccccchhh--ccCcee
Q 002932 21 EKFEVSSVDP--STTLLEFLRYHT---RFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCS--VNGCLI 93 (864)
Q Consensus 21 ~~~~~~~~~~--~~~Ll~~LR~~~---~l~g~K~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~p~~~--~~g~~i 93 (864)
+.++++ +++ ++|||++||+.. +..+++.||++|.||+|+|.| +|+++.||.+++.. +.|.+
T Consensus 21 ~~~~v~-~~~~~~~tll~~l~~~~~~~~~l~~~~~C~~g~Cg~C~v~v----------~G~~~laC~~~~~~~g~~~~~- 88 (238)
T 2wdq_B 21 QDYTLE-ADEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSDGLNM----------NGKNGLACITPISALNQPGKK- 88 (238)
T ss_dssp EEEEEE-CCTTCCCBHHHHHHHHHHHCTTCCCCCSSSSSSSCTTEEEE----------TTEEEEGGGCBGGGTCCTTSC-
T ss_pred EEEEee-cCCCCCChHHHHHHHhcccCCCccccccCCCCCCCCCEEEE----------CCEEEcccccchhhhccCCCC-
Confidence 457776 788 999999999875 789999999999999999999 79999999999999 77777
Q ss_pred EEecCCC
Q 002932 94 TTSEGLG 100 (864)
Q Consensus 94 ~TvEgl~ 100 (864)
+|||+|.
T Consensus 89 ~~ie~l~ 95 (238)
T 2wdq_B 89 IVIRPLP 95 (238)
T ss_dssp EEEECCT
T ss_pred EEEeeCC
Confidence 8999996
No 27
>2bs2_B Quinol-fumarate reductase iron-sulfur subunit B; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.1.2.1 d.15.4.2 PDB: 2bs3_B* 1e7p_B* 1qlb_B* 2bs4_B*
Probab=98.78 E-value=1.7e-08 Score=106.17 Aligned_cols=69 Identities=20% Similarity=0.349 Sum_probs=60.0
Q ss_pred EEEEEecCCCCCcHHHHHhh---ccCC-cccccCCCCCCCCccEEEEeecCCCcccCCceeecccccchhhccCceeEEe
Q 002932 21 EKFEVSSVDPSTTLLEFLRY---HTRF-KSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLITTS 96 (864)
Q Consensus 21 ~~~~~~~~~~~~~Ll~~LR~---~~~l-~g~K~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~p~~~~~g~~i~Tv 96 (864)
+.++++ +++++|||+.||. +++. .+++.+|.+|.||+|+|.| +|+++.||.+++..++| .++||
T Consensus 24 ~~~~v~-~~~~~tlL~~l~~~~~~~~~~l~~~~~c~~g~Cg~C~v~i----------~G~~~~aC~~~~~~~~g-~~~~i 91 (241)
T 2bs2_B 24 QEYKIE-EAPSMTIFIVLNMIRETYDPDLNFDFVCRAGICGSCGMMI----------NGRPSLACRTLTKDFED-GVITL 91 (241)
T ss_dssp EEEEEE-CCTTCBHHHHHHHHHHHTCTTCCCCCSSSSSSSCTTEEEE----------TTEEEEGGGCBGGGCTT-SEEEE
T ss_pred EEEEEe-CCCCChHHHHHHHhchhcCCCCccCCCCCCCCCCCCEeEE----------CCCeecchhCcHhHcCC-CeEEE
Confidence 457776 7899999999986 3344 4789999999999999999 79999999999999987 89999
Q ss_pred cCCCC
Q 002932 97 EGLGN 101 (864)
Q Consensus 97 Egl~~ 101 (864)
|+|.+
T Consensus 92 e~l~~ 96 (241)
T 2bs2_B 92 LPLPA 96 (241)
T ss_dssp ECCTT
T ss_pred ecCCC
Confidence 99974
No 28
>3c8y_A Iron hydrogenase 1; dithiomethylether, H-cluster, iron-sulfur binding, oxidoreductase; HET: HCN; 1.39A {Clostridium pasteurianum} SCOP: c.96.1.1 d.15.4.2 d.58.1.5 PDB: 1c4c_A* 1c4a_A* 1feh_A*
Probab=98.77 E-value=3.7e-09 Score=124.65 Aligned_cols=107 Identities=23% Similarity=0.447 Sum_probs=87.8
Q ss_pred EEEEECCEEEEEecCCCCCcHHHHHhhccCCccc----ccCC-C-CCCCCccEEEEeecCCCcccCCce-eecccccchh
Q 002932 14 VVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSV----KLGC-G-EGGCGACVVLLSKYNPELDQLEDF-TISSCLTLLC 86 (864)
Q Consensus 14 i~~~lNg~~~~~~~~~~~~~Ll~~LR~~~~l~g~----K~gC-~-~G~CGaCtV~~~~~~~~~~~~~~~-~v~sCl~p~~ 86 (864)
|+|+|||+.+++ ++++|||+.||+. |+... ..+| + .|.||+|+|.+ +|+ .+.||.+++.
T Consensus 2 v~~~ing~~v~v---~~g~tiL~a~~~~-gi~ip~lC~~~~~~~~~G~Cg~C~V~v----------~g~~~~~aC~t~v~ 67 (574)
T 3c8y_A 2 KTIIINGVQFNT---DEDTTILKFARDN-NIDISALCFLNNCNNDINKCEICTVEV----------EGTGLVTACDTLIE 67 (574)
T ss_dssp EEEEETTEEEEE---CCCCBHHHHHHHT-TCCCCCSSCBTTBCCSSSCCCTTEEEE----------TTTEEEEGGGCBCC
T ss_pred eEEEECCEEEEe---CCCCHHHHHHHHc-CCCCCcccCCCCCCCCcccCCCCEEEe----------CCCcccccCCCCcc
Confidence 899999998875 5799999999985 66322 1344 5 89999999999 566 8999999987
Q ss_pred hccCceeEEecCCCCCCCCcchHhHHHHhcCCCCCCCCChHHHHHHHHHHHh
Q 002932 87 SVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVD 138 (864)
Q Consensus 87 ~~~g~~i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtPG~vm~~~~ll~~ 138 (864)
+|..|.|.++... ..-+.+++.|...|..+|++|.++..+.+..+...
T Consensus 68 --~gm~V~T~~~~~~--~~r~~~lelll~~h~~~C~~C~~~~~C~Lq~~a~~ 115 (574)
T 3c8y_A 68 --DGMIINTNSDAVN--EKIKSRISQLLDIHEFKCGPCNRRENCEFLKLVIK 115 (574)
T ss_dssp --TTCEEESSCHHHH--HHHHHHHHHHHTTSCCCCTTCTTTTSCHHHHHHHH
T ss_pred --cceeEEecchhhh--hhHHHHHHHHHhccCCCCCcCCCCcchHHHHHHHH
Confidence 8999999999863 23367999999999999999999988888777543
No 29
>2h88_B Succinate dehydrogenase IP subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_B* 1yq3_B* 2fbw_B* 2h89_B* 2wqy_B* 3aef_B* 3abv_B* 3ae1_B* 3ae3_B* 3ae2_B* 3ae5_B* 3ae6_B* 3ae7_B* 3ae8_B* 3ae9_B* 3aea_B* 3aeb_B* 3aec_B* 3aed_B* 3aee_B* ...
Probab=98.74 E-value=1.5e-08 Score=107.27 Aligned_cols=82 Identities=20% Similarity=0.325 Sum_probs=66.8
Q ss_pred CCceeEEEEEE---C----C-----EEEEEecCCC-CCcHHHHHhhcc----CCcccccCCCCCCCCccEEEEeecCCCc
Q 002932 8 GGTRHSVVFAV---N----G-----EKFEVSSVDP-STTLLEFLRYHT----RFKSVKLGCGEGGCGACVVLLSKYNPEL 70 (864)
Q Consensus 8 ~~~~~~i~~~l---N----g-----~~~~~~~~~~-~~~Ll~~LR~~~----~l~g~K~gC~~G~CGaCtV~~~~~~~~~ 70 (864)
.+..++++|.| | + +.++++ +++ ++||||.||+.. ...+++.+|.+|.||+|+|.|
T Consensus 6 ~~~~~~~~~~i~R~~~~~~~~~~~~~~~~v~-~~~~~~tlLd~l~~~~~~~~p~l~~~~~c~~g~Cg~C~v~i------- 77 (252)
T 2h88_B 6 AATSRIKKFSIYRWDPDKPGDKPRMQTYEVD-LNKCGPMVLDALIKIKNELDSTLTFRRSCREGICGSCAMNI------- 77 (252)
T ss_dssp --CCCEEEEEEEECCTTSTTSCCEEEEEEEE-GGGSCSBHHHHHHHHHHHTCTTCCCCCSCSSSSSCTTEEEE-------
T ss_pred CCCCceEEEEEEEeCCCCCCCCceEEEEEEe-cCCCCChHHHHHHHhCcccCCCccccCCCCCCCCCCCEEEE-------
Confidence 34456677766 2 3 567777 677 999999999842 267899999999999999999
Q ss_pred ccCCceeecccccchhhccCceeEEecCCCC
Q 002932 71 DQLEDFTISSCLTLLCSVNGCLITTSEGLGN 101 (864)
Q Consensus 71 ~~~~~~~v~sCl~p~~~~~g~~i~TvEgl~~ 101 (864)
+|+++.||.+++..++|. ++|||+|.+
T Consensus 78 ---~G~~~~aC~~~~~~~~g~-~~~iepl~~ 104 (252)
T 2h88_B 78 ---AGGNTLACTKKIDPDLSK-TTKIYPLPH 104 (252)
T ss_dssp ---TTEEEEGGGSBCCCCTTS-CEEEECSTT
T ss_pred ---CCcEEccccCCHhHcCCC-ceEEecccC
Confidence 799999999999999877 899999974
No 30
>1kf6_B Fumarate reductase iron-sulfur protein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.1.2.1 d.15.4.2 PDB: 1kfy_B* 1l0v_B* 2b76_B* 3cir_B* 3p4p_B* 3p4q_B* 3p4r_B* 3p4s_B*
Probab=98.35 E-value=5.4e-07 Score=94.71 Aligned_cols=68 Identities=28% Similarity=0.455 Sum_probs=57.1
Q ss_pred EEEEEecCCCCCcHHHHHhhc----cCCcccccCCCCCCCCccEEEEeecCCCcccCCceeecccccchhhccCceeEEe
Q 002932 21 EKFEVSSVDPSTTLLEFLRYH----TRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLITTS 96 (864)
Q Consensus 21 ~~~~~~~~~~~~~Ll~~LR~~----~~l~g~K~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~p~~~~~g~~i~Tv 96 (864)
+.++++ +++++|||+.||+. ....+++.+|.+|.||+|+|.| +|+++.||.+++....+ ++||
T Consensus 24 ~~~~~~-~~~~~tll~al~~~~~~~~p~l~~~~~c~~G~Cg~C~v~v----------~G~~~~aC~~~~~~~~~--~~~i 90 (243)
T 1kf6_B 24 AFYEVP-YDATTSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGMMV----------NNVPKLACKTFLRDYTD--GMKV 90 (243)
T ss_dssp EEEEEE-ECTTCBHHHHHHHHHHHTCTTCCCCCCCSSSSSCCCEEEE----------TTEEEEGGGCBGGGCTT--CEEE
T ss_pred EEEEEe-cCCCChHHHHHHHcCcccCCCcccccCCCCCcCCCCEeEE----------CCEEEeeeeeEHhhCCC--cEEE
Confidence 456666 68999999999974 1234789999999999999999 79999999999988765 6999
Q ss_pred cCCCC
Q 002932 97 EGLGN 101 (864)
Q Consensus 97 Egl~~ 101 (864)
|+|..
T Consensus 91 ~~l~~ 95 (243)
T 1kf6_B 91 EALAN 95 (243)
T ss_dssp ECCTT
T ss_pred EecCC
Confidence 99864
No 31
>1l5p_A Ferredoxin; [2Fe-2S] cluster, electron transfer, iron-sulfur protein, metalloprotein, oxidoreductase; 2.20A {Trichomonas vaginalis} SCOP: d.15.4.1
Probab=98.16 E-value=8.3e-06 Score=72.72 Aligned_cols=79 Identities=18% Similarity=0.278 Sum_probs=58.5
Q ss_pred EEEEEECCEEEEEecCCCCCcHHHHHhhccCCcccccCCC-CCCCCccEEEEeecCC--Ccc-------cCCceeecccc
Q 002932 13 SVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCG-EGGCGACVVLLSKYNP--ELD-------QLEDFTISSCL 82 (864)
Q Consensus 13 ~i~~~lNg~~~~~~~~~~~~~Ll~~LR~~~~l~g~K~gC~-~G~CGaCtV~~~~~~~--~~~-------~~~~~~v~sCl 82 (864)
+|+|.+||+.++++ ++++++||+.|++. |+.|++.+|+ .|.||+|.|.|..-.. .+. ....-.+.+|.
T Consensus 2 ~v~i~~~g~~~~~~-~~~g~tll~a~~~~-gi~gi~~~C~G~G~Cg~C~v~v~~g~~~~~~~~e~~~L~~~~~g~rLaCq 79 (93)
T 1l5p_A 2 TITAVKGGVKKQLK-FEDDQTLFTVLTEA-GLMSADDTCQGNKACGKCICKHVSGKVAAAEDDEKEFLEDQPANARLACA 79 (93)
T ss_dssp EEEEEETTEEEEEE-CCTTEEHHHHHHTT-TSSCCTTSCSSSSSSCCCEEEEEESCCCCCCHHHHHHHTTSCTTEEEGGG
T ss_pred eEEEEeCCcEEEEE-ECCCChHHHHHHHc-CCCcCCcCCCCcCCcCCCEEEECCCcCCCCCHHHHHHhcCCCCCcEEeeE
Confidence 57899999998887 79999999999986 9999999999 9999999999954111 000 11222456776
Q ss_pred c-chhhccCcee
Q 002932 83 T-LLCSVNGCLI 93 (864)
Q Consensus 83 ~-p~~~~~g~~i 93 (864)
. |...++|..|
T Consensus 80 ~~~~~d~~g~~v 91 (93)
T 1l5p_A 80 ITLSGENDGAVF 91 (93)
T ss_dssp CEECGGGTTCEE
T ss_pred CEECCCCCceEE
Confidence 4 4455666544
No 32
>2wlb_A ETP1-FD, electron transfer protein 1, mitochondrial; iron-sulfur, iron, transport, ferredoxin, adrenodoxin-like, electron transport; 2.60A {Schizosaccharomyces pombe}
Probab=97.80 E-value=2.2e-05 Score=71.26 Aligned_cols=54 Identities=19% Similarity=0.466 Sum_probs=46.7
Q ss_pred CceeEEEEE-ECCEEEEEecCCCCCcHHHHHhhccCCcccccCCC-CCCCCccEEEEee
Q 002932 9 GTRHSVVFA-VNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCG-EGGCGACVVLLSK 65 (864)
Q Consensus 9 ~~~~~i~~~-lNg~~~~~~~~~~~~~Ll~~LR~~~~l~g~K~gC~-~G~CGaCtV~~~~ 65 (864)
|....|+|. .||+.++++ +++++|||+.|++. |+. ++.+|+ .|.||.|.|.|..
T Consensus 1 ~~~~~v~~~~~~g~~~~~~-~~~g~tlL~a~~~~-gi~-i~~~C~g~G~Cg~C~v~v~~ 56 (103)
T 2wlb_A 1 GTGIKVFFVTPEGREIMIE-GNEGDSILDLAHAN-NID-LEGACEGSVACSTCHVIVDP 56 (103)
T ss_dssp CCCEEEEEECTTCCEEEEE-ECTTCBHHHHHHHT-TCC-CCCTTTTSSCCSTTEEEECH
T ss_pred CCceEEEEEeCCCCEEEEE-ECCCCHHHHHHHHc-CCC-cCcCCCCCCCcCCCEEEECC
Confidence 456789999 999777776 68999999999986 888 999999 7999999999853
No 33
>1iue_A Ferredoxin; electron transport, iron-sulfur; 1.70A {Plasmodium falciparum} SCOP: d.15.4.1
Probab=97.80 E-value=3.2e-05 Score=69.51 Aligned_cols=51 Identities=14% Similarity=0.358 Sum_probs=43.6
Q ss_pred eeEEEEEECCEEEEEecCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEe
Q 002932 11 RHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLS 64 (864)
Q Consensus 11 ~~~i~~~lNg~~~~~~~~~~~~~Ll~~LR~~~~l~g~K~gC~~G~CGaCtV~~~ 64 (864)
..+|+|.+||..++++ ++++++||+.|++. |+ .++.+|+.|.||.|.|.|.
T Consensus 2 ~~~v~~~~~~~~~~~~-~~~g~tlL~a~~~~-gi-~i~~~C~~G~Cg~C~v~v~ 52 (98)
T 1iue_A 2 FYNITLRTNDGEKKIE-CNEDEYILDASERQ-NV-ELPYSCRGGSCSTCAAKLV 52 (98)
T ss_dssp EEEEEEEETTEEEEEE-EETTSCHHHHHHHT-TC-CCCCSSCSSSSSTTEEEEE
T ss_pred cEEEEEEeCCCeEEEE-eCCCCcHHHHHHHc-CC-CCCCCCCCCcCCCCEEEEe
Confidence 4578999999666665 67899999999976 88 6999999999999999983
No 34
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=97.77 E-value=2.1e-05 Score=86.57 Aligned_cols=153 Identities=13% Similarity=0.078 Sum_probs=99.8
Q ss_pred CceEEecCCHHHHHHHHhhhcCCCCCcceEEccCccceEeeecccCceeeeCCCCccccceEecC-CcEEecccccHHHH
Q 002932 240 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQ-TGIEIGATVTISKA 318 (864)
Q Consensus 240 ~~~~~~P~tl~eal~ll~~~~~~~~~~a~lvaGgTdl~v~k~~~~~~~lIdl~~I~EL~~I~~~~-~~l~IGA~vTl~~l 318 (864)
...+++|+|.+|+.++++.... ..-...+++|||.+.+-.. ....+|+++ +.++..++.++ ..+++||++++.+|
T Consensus 15 a~~~v~p~s~eel~~~l~~a~~-~~~pv~vlGgGSnll~~d~--~~GvVI~l~-~~~i~~i~~~~~~~v~vgAG~~~~~l 90 (340)
T 1uxy_A 15 AQHIVCAEDEQQLLNAWQYATA-EGQPVLILGEGSNVLFLED--YRGTVIINR-IKGIEIHDEPDAWYLHVGAGENWHRL 90 (340)
T ss_dssp EEEEEEESSHHHHHHHHHHHHH-TTCCEEEESSCTTEEECSC--EEEEEEEEC-CCCEEEEECSSEEEEEEETTSBHHHH
T ss_pred ccEEEEeCCHHHHHHHHHHHHH-cCCCEEEECCCcCCcccCC--CCeEEEEcc-CCCcEEEecCCCeEEEEecCCCHHHH
Confidence 3468899999999998874311 2346789999999977432 356889985 66666555555 58999999999999
Q ss_pred HHHHHHHhhhhhhhhhhhHHHHHHHH---HHhccccccCCcccCCccccccCCCCCCchHHHHHhcCcEEEEEeC-Ce-e
Q 002932 319 IEALKEETKEFHSEALMVFKKIAGHM---EKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTG-QK-C 393 (864)
Q Consensus 319 ~~~l~~~~~~~~~~~~~~~~~L~~~l---~~ias~qIRN~aTiGGNI~~asp~~f~sD~~p~LlaldA~v~l~s~-~g-~ 393 (864)
.+.+.+. .+..|..+. ..+|+..++|.|+-|++++..-. .|++... +| .
T Consensus 91 ~~~~~~~----------Gl~Gle~~~gIPGtVGGa~~~NaGayG~ei~d~v~----------------~v~vv~~~~G~v 144 (340)
T 1uxy_A 91 VKYTLQE----------GMPGLENLALIPGCVGSSPIQNIGAYGVELQRVCA----------------YVDSVELATGKQ 144 (340)
T ss_dssp HHHHHHT----------TCCSCGGGTTCCSBGGGTTTTTCEETTEEGGGTEE----------------EEEEEETTTTEE
T ss_pred HHHHHHC----------CCCccccccCCccchhHHHHhccccchhhHHhhee----------------EEEEEECCCCcE
Confidence 9986543 111111111 35666677777776666553321 2677774 66 4
Q ss_pred EEEehhhhhc--CC-CCC----CCceEEEEEcCCCC
Q 002932 394 EKLMLEEFLE--RP-PLD----SRSILLSVEIPCWD 422 (864)
Q Consensus 394 R~vpl~dF~~--~~-~l~----~~Eii~~I~iP~~~ 422 (864)
++++-+|++- +. .+. ...||+++.+...+
T Consensus 145 ~~~~~~d~~~gYR~s~~~~~~~~~gIVt~v~~~L~~ 180 (340)
T 1uxy_A 145 VRLTAKECRFGYRDSIFKHEYQDRFAIVAVGLRLPK 180 (340)
T ss_dssp EEEETGGGTCBTTBCGGGTTTTTTEEEEEEEEEEES
T ss_pred EEEeHHHhccccCcCccCCcCCCCEEEEEEEEEEEc
Confidence 8888888553 22 222 26789988876543
No 35
>1a70_A Ferredoxin; iron-sulfur protein, photosynthesis, electron transport; 1.70A {Spinacia oleracea} SCOP: d.15.4.1 PDB: 1pfd_A
Probab=97.75 E-value=4.3e-05 Score=68.55 Aligned_cols=51 Identities=16% Similarity=0.322 Sum_probs=43.0
Q ss_pred eeEEEEEECCEEEEEecCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEe
Q 002932 11 RHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLS 64 (864)
Q Consensus 11 ~~~i~~~lNg~~~~~~~~~~~~~Ll~~LR~~~~l~g~K~gC~~G~CGaCtV~~~ 64 (864)
..+|+|..+|..++++ +++++|||+.|++. |+. ++.+|+.|.||+|.|.|.
T Consensus 2 ~~~v~~~~~~~~~~~~-~~~g~tlL~a~~~~-gi~-i~~~C~~G~Cg~C~v~v~ 52 (97)
T 1a70_A 2 AYKVTLVTPTGNVEFQ-CPDDVYILDAAEEE-GID-LPYSCRAGSCSSCAGKLK 52 (97)
T ss_dssp EEEEEEEETTEEEEEE-EETTSCHHHHHHHT-TCC-CCCSSSSSCSSTTEEEEE
T ss_pred eEEEEEEeCCceEEEE-eCCCCcHHHHHHHc-CCC-cccCCCCcCCCCCeEEEc
Confidence 3578888777566666 67899999999975 887 999999999999999983
No 36
>1jq4_A Methane monooxygenase component C; [2Fe-2S] ferredoxin, oxidoreductase; NMR {Methylococcus capsulatus str} SCOP: d.15.4.2
Probab=97.72 E-value=2.2e-05 Score=70.56 Aligned_cols=51 Identities=20% Similarity=0.403 Sum_probs=43.9
Q ss_pred eeEEEEEEC---CEEEEEecCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEe
Q 002932 11 RHSVVFAVN---GEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLS 64 (864)
Q Consensus 11 ~~~i~~~lN---g~~~~~~~~~~~~~Ll~~LR~~~~l~g~K~gC~~G~CGaCtV~~~ 64 (864)
+++++++|| |..++++ ++++++||+.||+. |+. ++.+|+.|.||+|.|.|.
T Consensus 2 ~~~~~v~~~~~~~~~~~~~-~~~g~tlL~a~~~~-gi~-i~~~C~~G~Cg~C~v~v~ 55 (98)
T 1jq4_A 2 QRVHTITAVTEDGESLRFE-CRSDEDVITAALRQ-NIF-LMSSCREGGCATCKALCS 55 (98)
T ss_dssp CCEEEEEEEETTTEEEEEE-EESCCTHHHHHHHH-TCC-CCCSCCSSCCCCCCBCEE
T ss_pred CCcEEEEEEecCCCcEEEE-eCCCChHHHHHHHc-CCC-CcCCCCCCCCCCCEEEEE
Confidence 356788888 7777776 68899999999975 887 999999999999999983
No 37
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=97.70 E-value=3.3e-05 Score=84.67 Aligned_cols=153 Identities=14% Similarity=0.151 Sum_probs=97.3
Q ss_pred ceEEecCCHHHHHHHHhhhcCCCCCcceEEccCccceEeeecccCceeeeCCCCccccceEecCCcEEecccccHHHHHH
Q 002932 241 GSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIE 320 (864)
Q Consensus 241 ~~~~~P~tl~eal~ll~~~~~~~~~~a~lvaGgTdl~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~~ 320 (864)
..+++|+|.+|+.++++.... ..-...+++|||++..-.. .....+||+++ |+.|+.+++.+++||++++.+|.+
T Consensus 50 ~~vv~P~s~eev~~~l~~a~~-~~~pv~~~GgGtnl~~~~~-~~~gvvI~l~~---m~~i~id~~~v~v~aGv~~~~l~~ 124 (326)
T 1hsk_A 50 DFYITPTKNEEVQAVVKYAYQ-NEIPVTYLGNGSNIIIREG-GIRGIVISLLS---LDHIEVSDDAIIAGSGAAIIDVSR 124 (326)
T ss_dssp EEEECCSSHHHHHHHHHHHHH-TTCCEEEESSCSSEEECTT-CEEEEEEECTT---CCCEEEETTEEEEETTSBHHHHHH
T ss_pred eEEEEcCCHHHHHHHHHHHHH-cCCCEEEECCCCccccCCC-CCCeEEEEeCC---CCceEEcCCEEEEeCCCcHHHHHH
Confidence 458899999999998874211 2346889999999865321 12468999986 667766778999999999999999
Q ss_pred HHHHHhhhhhhhhhhhHHHHHHHHHHhccccccCCcccCCccccc-cCCCCCCchHHHHHhcCcEEEEEeCCe-eEEEeh
Q 002932 321 ALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMA-QRKHFPSDVATVLLGAGAMVNIMTGQK-CEKLML 398 (864)
Q Consensus 321 ~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~a-sp~~f~sD~~p~LlaldA~v~l~s~~g-~R~vpl 398 (864)
.+.+.- ++. +..++.. -+||||++++. ...+ ..+.=.++ .+++...+| .++++-
T Consensus 125 ~l~~~G----------l~g----Le~~~~~----PgtvGG~i~~naggyG--~~~~d~v~----~v~vv~~~G~i~~~~~ 180 (326)
T 1hsk_A 125 VARDYA----------LTG----LEFACGI----PGSIGGAVYMNAGAYG--GEVKDCID----YALCVNEQGSLIKLTT 180 (326)
T ss_dssp HHHHTT----------EES----CGGGTTC----CSBHHHHHHHTCEETT--EEHHHHEE----EEEEECTTSCEEEEET
T ss_pred HHHHCC----------Ccc----ccccCCC----cchhhHHHhcccccCc--hhhhhhEE----EEEEEeCCCCEEEECh
Confidence 865430 110 0011111 15899998753 3332 12322222 455666777 477777
Q ss_pred hhhhcC---CCC-CCCceEEEEEcCCCC
Q 002932 399 EEFLER---PPL-DSRSILLSVEIPCWD 422 (864)
Q Consensus 399 ~dF~~~---~~l-~~~Eii~~I~iP~~~ 422 (864)
++++.. ..| ..+.||+++.+...+
T Consensus 181 ~~~~~gyr~~~l~s~ggIIt~~~l~l~p 208 (326)
T 1hsk_A 181 KELELDYRNSIIQKEHLVVLEAAFTLAP 208 (326)
T ss_dssp TTTTCBTTBCHHHHTTCEEEEEEEECEE
T ss_pred HHcCCCccccccCCCCEEEEEEEEEEEc
Confidence 775431 222 236899999987654
No 38
>1wri_A Ferredoxin II, ferredoxin; electron transport; 1.20A {Equisetum arvense} SCOP: d.15.4.1
Probab=97.62 E-value=9.4e-05 Score=65.79 Aligned_cols=49 Identities=18% Similarity=0.451 Sum_probs=42.5
Q ss_pred eEEEEEECCEEEEEecCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEe
Q 002932 12 HSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLS 64 (864)
Q Consensus 12 ~~i~~~lNg~~~~~~~~~~~~~Ll~~LR~~~~l~g~K~gC~~G~CGaCtV~~~ 64 (864)
..|+|..||..++++ +++++|||+.|++. | .++.+|+.|.||.|.|.|.
T Consensus 2 ~~V~~~~~~~~~~~~-~~~g~tlL~a~~~~-g--~i~~~C~~G~Cg~C~v~v~ 50 (93)
T 1wri_A 2 YKVTLKTPDGDITFD-VEPGERLIDIGSEK-A--DLPLSCQAGACSTCLGKIV 50 (93)
T ss_dssp EEEEEEETTEEEEEE-ECTTSCHHHHHHHH-S--CCCCSSSSSSSSTTEEEEE
T ss_pred EEEEEEECCCeEEEE-ECCCCcHHHHHHHC-c--CCCCCCCCCCCCCCEEEEe
Confidence 468898888666776 68999999999986 7 7999999999999999983
No 39
>1frr_A Ferredoxin I; electron transfer(iron-sulfur protein); 1.80A {Equisetum arvense} SCOP: d.15.4.1
Probab=97.59 E-value=8.2e-05 Score=66.25 Aligned_cols=49 Identities=22% Similarity=0.525 Sum_probs=41.0
Q ss_pred eEEEEE-ECCEEEEEecCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEe
Q 002932 12 HSVVFA-VNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLS 64 (864)
Q Consensus 12 ~~i~~~-lNg~~~~~~~~~~~~~Ll~~LR~~~~l~g~K~gC~~G~CGaCtV~~~ 64 (864)
.+|+|. .|| .++++ +++++|||+.|++. |+. ...+|+.|.||.|.|.|.
T Consensus 2 ~~v~~~~~~g-~~~~~-~~~g~tlL~a~~~~-gi~-i~~~C~~G~Cg~C~v~v~ 51 (95)
T 1frr_A 2 YKTVLKTPSG-EFTLD-VPEGTTILDAAEEA-GYD-LPFSCRAGACSSCLGKVV 51 (95)
T ss_dssp EEEEEEETTE-EEEEE-ECTTCCHHHHHHHT-TCC-CCCSSSSSSSSTTEEEEE
T ss_pred eEEEEEeCCC-cEEEE-eCCCCcHHHHHHHc-CCC-CCCCCCCcCCCCCEEEEE
Confidence 468887 888 45555 57899999999876 874 899999999999999995
No 40
>1awd_A Ferredoxin; electron transport, eukaryotic, green ALGA, electron transfer, metalloprotein; 1.40A {'chlorella' fusca} SCOP: d.15.4.1
Probab=97.59 E-value=0.00013 Score=65.06 Aligned_cols=49 Identities=14% Similarity=0.335 Sum_probs=41.6
Q ss_pred EEEEEECCEEEEEecCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEe
Q 002932 13 SVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLS 64 (864)
Q Consensus 13 ~i~~~lNg~~~~~~~~~~~~~Ll~~LR~~~~l~g~K~gC~~G~CGaCtV~~~ 64 (864)
+|+|..++..++++ +++++|||+.|++. |+ .++.+|+.|.||.|.|.|.
T Consensus 2 ~v~~~~~~g~~~~~-~~~g~tlL~a~~~~-gi-~i~~~C~~G~Cg~C~v~v~ 50 (94)
T 1awd_A 2 KVTLKTPSGEETIE-CPEDTYILDAAEEA-GL-DLPYSCRAGACSSCAGKVE 50 (94)
T ss_dssp EEEEEETTEEEEEE-CCTTSCHHHHHHHT-TC-CCCCSSSSSSSSTTEEEEE
T ss_pred EEEEEeCCCcEEEE-ECCCCcHHHHHHHc-CC-CCCcCCCCCcCCCCEEEEE
Confidence 58888765566676 78999999999975 87 5999999999999999983
No 41
>1frd_A Heterocyst [2Fe-2S] ferredoxin; electron transport; 1.70A {Nostoc SP} SCOP: d.15.4.1
Probab=97.55 E-value=0.00011 Score=65.77 Aligned_cols=51 Identities=20% Similarity=0.400 Sum_probs=41.8
Q ss_pred eeEEEEEECCE--EEEEecCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEe
Q 002932 11 RHSVVFAVNGE--KFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLS 64 (864)
Q Consensus 11 ~~~i~~~lNg~--~~~~~~~~~~~~Ll~~LR~~~~l~g~K~gC~~G~CGaCtV~~~ 64 (864)
...|+|..|+. .++++ +++++|||+.|++. |+. ...+|+.|.||.|.|.|.
T Consensus 2 ~~~V~~~~~~~~~~~~~~-~~~g~tlL~a~~~~-gi~-i~~~C~~G~Cg~C~v~v~ 54 (98)
T 1frd_A 2 SYQVRLINKKQDIDTTIE-IDEETTILDGAEEN-GIE-LPFSCHSGSCSSCVGKVV 54 (98)
T ss_dssp EEEEEEEETTTTEEEEEE-EETTSCHHHHHHHT-TCC-CCCSSSSSSSSTTEEEEE
T ss_pred ceEEEEEeCCCCCCEEEE-eCCCCcHHHHHHHc-CCC-cccCCCCCCCCCCEEEEE
Confidence 35788988542 55665 57899999999875 876 899999999999999984
No 42
>1czp_A Ferredoxin I; [2Fe-2S] protein, crystal reduced with dithionite, electron; 1.17A {Nostoc SP} SCOP: d.15.4.1 PDB: 1ewy_C* 1fxa_A 1qt9_A 1qog_A 1j7c_A 1j7b_A 1qof_A 1qob_A 1j7a_A 1qoa_A 1rfk_A 3p63_A 4fxc_A 3ab5_A 1roe_A 2cjn_A 2cjo_A 1off_A 1dox_A 1doy_A ...
Probab=97.36 E-value=0.00023 Score=63.81 Aligned_cols=51 Identities=22% Similarity=0.459 Sum_probs=40.8
Q ss_pred eeEEEEEECCE--EEEEecCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEe
Q 002932 11 RHSVVFAVNGE--KFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLS 64 (864)
Q Consensus 11 ~~~i~~~lNg~--~~~~~~~~~~~~Ll~~LR~~~~l~g~K~gC~~G~CGaCtV~~~ 64 (864)
...|+|..++. ..+++ +++++|||+.|++. |+. +..+|+.|.||+|.|.|.
T Consensus 2 ~~~V~~~~~~~~~~~~~~-~~~g~tlL~a~~~~-gi~-i~~~C~~G~Cg~C~v~v~ 54 (98)
T 1czp_A 2 TFKVTLINEAEGTKHEIE-VPDDEYILDAAEEQ-GYD-LPFSCRAGACSTCAGKLV 54 (98)
T ss_dssp EEEEEEEETTTTEEEEEE-EETTSCHHHHHHHT-TCC-CCCSSSSSSSSTTEEEEE
T ss_pred ceEEEEEeCCCCCcEEEE-eCCCCCHHHHHHHc-CCC-ccCCCCCCCCCCCeEEEc
Confidence 35678877542 45555 57899999999875 887 999999999999999983
No 43
>3lxf_A Ferredoxin; iron, iron-sulfur, metal-binding, metal protein; 2.30A {Novosphingobium aromaticivorans} SCOP: d.15.4.0
Probab=97.29 E-value=0.00029 Score=64.03 Aligned_cols=80 Identities=21% Similarity=0.386 Sum_probs=57.7
Q ss_pred EEEEE-ECCEEEEEecCCCCCcHHHHHhhccCCcccccCCC-CCCCCccEEEEeecC-----CC--------c--ccCCc
Q 002932 13 SVVFA-VNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCG-EGGCGACVVLLSKYN-----PE--------L--DQLED 75 (864)
Q Consensus 13 ~i~~~-lNg~~~~~~~~~~~~~Ll~~LR~~~~l~g~K~gC~-~G~CGaCtV~~~~~~-----~~--------~--~~~~~ 75 (864)
+|+|. .||+.++++ +.++++||+.|++. |+.|...+|+ .|.||.|.|.|..-. +. + ..+..
T Consensus 2 ~vt~~~~~G~~~~~~-~~~g~tll~a~~~~-gi~~i~~~C~G~G~CgtC~v~v~~g~~~~l~~~~~~e~~~L~~~~~~~~ 79 (104)
T 3lxf_A 2 AILVTTRDGTRTEIQ-AEPGLSLMEALRDA-GIDELLALCGGCCSCATCHVLVAPAFADRLPALSGDENDLLDSSDHRTP 79 (104)
T ss_dssp EEEEECTTSCEEEEE-CCTTSBHHHHHHHT-TCTTCCCTTCSSSSCSTTEEEECGGGGGGSCCCCHHHHHHHHTSTTCCT
T ss_pred EEEEEeCCCCEEEEE-ECCCChHHHHHHHc-CCCCCCcCCCCCCCCCCCEEEECCcccccCCCCCHHHHHHhccccccCC
Confidence 46665 589999997 79999999999976 9999999999 999999999985421 00 0 11223
Q ss_pred eeecccccchh-hccCceeE
Q 002932 76 FTISSCLTLLC-SVNGCLIT 94 (864)
Q Consensus 76 ~~v~sCl~p~~-~~~g~~i~ 94 (864)
-.+.+|.+.+. .++|..|.
T Consensus 80 g~rLaCq~~~~~dl~gl~v~ 99 (104)
T 3lxf_A 80 HSRLSCQITINDKLEGLEVE 99 (104)
T ss_dssp TEEEGGGCBCCGGGTTCEEE
T ss_pred CcEEEeeCEEccCCCCEEEE
Confidence 34667776543 45666654
No 44
>1xlq_A Putidaredoxin, PDX; [2Fe-2S], ferredoxin, oxidoreductase; 1.45A {Pseudomonas putida} SCOP: d.15.4.1 PDB: 1xlp_A 1oqr_A 1r7s_A 1pdx_A 1yji_A 1yjj_A 1oqq_A 1xln_A 1xlo_A 3lb8_C* 1put_A 1gpx_A
Probab=97.15 E-value=0.0004 Score=63.12 Aligned_cols=51 Identities=22% Similarity=0.497 Sum_probs=43.8
Q ss_pred EEEE-EECCEEEEEecCCCCCcHHHHHhhccCCcccccCCC-CCCCCccEEEEee
Q 002932 13 SVVF-AVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCG-EGGCGACVVLLSK 65 (864)
Q Consensus 13 ~i~~-~lNg~~~~~~~~~~~~~Ll~~LR~~~~l~g~K~gC~-~G~CGaCtV~~~~ 65 (864)
+|+| ..||+.++++ +.+++|||+.+++. |+.|....|+ .|.||.|.|.|..
T Consensus 2 ~V~~~~~~g~~~~~~-~~~g~tlLeaa~~~-gi~~i~~~C~g~G~CgtC~v~v~~ 54 (106)
T 1xlq_A 2 KVVYVSHDGTRRELD-VADGVSLMQAAVSN-GIYDIVGDCGGSASCATCHVYVNE 54 (106)
T ss_dssp EEEEECTTSCEEEEE-CCTTCBHHHHHHHT-TCTTSCCTTCSSSSSCTTEEEECT
T ss_pred EEEEEeCCCCEEEEE-ECCCCcHHHHHHHc-CCCCCCcCCCCCcccCcCEEEECC
Confidence 5788 5799777776 78999999999875 8888999995 8999999999853
No 45
>1uwm_A Ferredoxin VI, FDVI; electron transport, metal-binding, iron-sulfur, iron, 2Fe-2S; 2.0A {Rhodobacter capsulatus} SCOP: d.15.4.1 PDB: 1e9m_A
Probab=97.13 E-value=0.00045 Score=62.79 Aligned_cols=51 Identities=25% Similarity=0.594 Sum_probs=43.7
Q ss_pred EEEE-EECCEEEEEecCCCCCcHHHHHhhccCCcccccCCC-CCCCCccEEEEee
Q 002932 13 SVVF-AVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCG-EGGCGACVVLLSK 65 (864)
Q Consensus 13 ~i~~-~lNg~~~~~~~~~~~~~Ll~~LR~~~~l~g~K~gC~-~G~CGaCtV~~~~ 65 (864)
+|+| ..||+.++++ +.+++|||+.+++. |+.|....|+ .|.||.|.|.|..
T Consensus 2 ~v~~~~~~g~~~~~~-~~~g~tlL~aa~~~-gi~~i~~~C~g~G~CgtC~v~v~~ 54 (106)
T 1uwm_A 2 KIIFIEHNGTRHEVE-AKPGLTVMEAARDN-GVPGIDADCGGACACSTCHAYVDP 54 (106)
T ss_dssp EEEEECTTCCEEEEE-CCTTSBHHHHHHTT-TCTTCCCTTSSSSSSCTTEEEECH
T ss_pred EEEEEeCCCCEEEEE-ECCCCcHHHHHHHc-CCCCcccCCCCCCCcCcCEEEECC
Confidence 5788 5789777776 78999999999875 8888999995 8999999999854
No 46
>3hui_A Ferredoxin; cytochrome P450, electron transfer, iron, iron-sulfur, metal-binding, electron transport; 2.01A {Rhodopseudomonas palustris}
Probab=97.08 E-value=0.00062 Score=64.08 Aligned_cols=52 Identities=25% Similarity=0.485 Sum_probs=44.9
Q ss_pred eEEEEE-ECCEEEEEecCCCCCcHHHHHhhccCCcccccCCC-CCCCCccEEEEee
Q 002932 12 HSVVFA-VNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCG-EGGCGACVVLLSK 65 (864)
Q Consensus 12 ~~i~~~-lNg~~~~~~~~~~~~~Ll~~LR~~~~l~g~K~gC~-~G~CGaCtV~~~~ 65 (864)
.+|+|. .+|+.++++ +.++++||+.|++. |+.|....|+ .|.||.|.|.|..
T Consensus 22 ~~Vt~~~~~G~~~~v~-~~~G~tLL~aa~~~-gi~gi~~~C~G~G~CgtC~v~v~~ 75 (126)
T 3hui_A 22 AKINFVDHTGETRTVE-VEEGATVMEAAIRN-AIPGVEAECGGACACATCHVYVDE 75 (126)
T ss_dssp EEEEEECTTSCEEEEE-EETTSBHHHHHHTT-TCTTCCCTTSSSSCCSTTEEEECG
T ss_pred eEEEEEeCCCCEEEEE-ECCCCcHHHHHHHc-CCCCCccCCCCCCCCCCCEEEECC
Confidence 367887 789777776 68999999999976 9999999998 8999999999854
No 47
>1i7h_A Ferredoxin; 2Fe-2S,electron transport; 1.70A {Escherichia coli} SCOP: d.15.4.1
Probab=97.04 E-value=0.00049 Score=63.15 Aligned_cols=50 Identities=12% Similarity=0.357 Sum_probs=39.7
Q ss_pred EEEEEEC-C---EEEEEecCCCCCcHHHHHhhccCCcccccCC-CCCCCCccEEEEee
Q 002932 13 SVVFAVN-G---EKFEVSSVDPSTTLLEFLRYHTRFKSVKLGC-GEGGCGACVVLLSK 65 (864)
Q Consensus 13 ~i~~~lN-g---~~~~~~~~~~~~~Ll~~LR~~~~l~g~K~gC-~~G~CGaCtV~~~~ 65 (864)
+|+|..| | ..++++ +++++|||+.|++. |+. +..+| +.|.||.|.|.|..
T Consensus 3 ~i~~~~~~g~~~~~~~~~-~~~g~tlL~a~~~~-gi~-i~~~C~~~G~Cg~C~v~v~~ 57 (111)
T 1i7h_A 3 KIVILPHQDLCPDGAVLE-ANSGETILDAALRN-GIE-IEHACEKSCACTTCHCIVRE 57 (111)
T ss_dssp EEEECCBTTTBTTCEEEE-CCTTCBHHHHHHHT-TCC-CCCTTSSSSCCSTTEEEEEE
T ss_pred EEEEEeCCCcCCCCeEEE-eCCCCcHHHHHHHc-CCC-CcccCCCCCcCCCCEEEEcc
Confidence 5888883 2 334454 57899999999876 876 99999 59999999999853
No 48
>1b9r_A Protein (terpredoxin); structure from molmol, ferredoxin; NMR {Pseudomonas SP} SCOP: d.15.4.1
Probab=96.79 E-value=0.00054 Score=62.17 Aligned_cols=51 Identities=20% Similarity=0.458 Sum_probs=43.4
Q ss_pred EEEE-EECCEEEEEecCCCCCcHHHHHhhccCCcccccCCC-CCCCCccEEEEee
Q 002932 13 SVVF-AVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCG-EGGCGACVVLLSK 65 (864)
Q Consensus 13 ~i~~-~lNg~~~~~~~~~~~~~Ll~~LR~~~~l~g~K~gC~-~G~CGaCtV~~~~ 65 (864)
+|+| ..||+.++++ +.+++|||+.+++. |+.|....|+ .|.||.|.|.|..
T Consensus 2 ~V~~~~~~g~~~~~~-~~~g~tlL~aa~~~-gi~~i~~~C~g~G~CgtC~v~v~~ 54 (105)
T 1b9r_A 2 RVVFIDEQSGEYAVD-AQDGQSLMEVATQN-GVPGIVAECGGSCVCATCRIEIED 54 (105)
T ss_dssp EEEECCTTTSCEEEE-CCTTCCTTHHHHHH-TCCCCCCSSTTSSCCCCCCCEECT
T ss_pred EEEEEeCCCCEEEEE-ECCCChHHHHHHHc-CCCCcCcCCCCCCCcCcCEEEECC
Confidence 5778 5789767776 68899999999876 8888999998 7999999999853
No 49
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=96.47 E-value=0.0044 Score=67.57 Aligned_cols=154 Identities=17% Similarity=0.242 Sum_probs=92.0
Q ss_pred CceEEecCCHHHHHHHHhhhcCCCCCcceEEccCccceEeeecccCceeeeCCCCccccceEecCCcEEecccccHHHHH
Q 002932 240 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAI 319 (864)
Q Consensus 240 ~~~~~~P~tl~eal~ll~~~~~~~~~~a~lvaGgTdl~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~ 319 (864)
...+++|+|.+|+.++++.... ..-...+++|||.+.+-.. .....+||+++ |+.|..+++.+++||++++.+|.
T Consensus 55 p~~vv~P~s~eev~~~v~~a~~-~~~pv~v~GgGsnl~~~~~-~~~gvvI~l~~---~~~I~~d~~~v~v~aG~~~~~l~ 129 (322)
T 3tx1_A 55 ADVFVMPKTIEEAQEVVAYCHQ-NKIPLTILGNGSNLIIKDG-GIRGVILHLDL---LQTIERNNTQIVAMSGAKLIDTA 129 (322)
T ss_dssp EEEEEECSSHHHHHHHHHHHHH-TTCCEEEESCCTTEEECTT-CEEEEEEECTT---CCCEEEETTEEEEETTSBHHHHH
T ss_pred eeEEEEeCCHHHHHHHHHHHHH-cCCcEEEECCccCCCcCCC-CCCeEEEECCC---CCcEEECCCEEEEecCcCHHHHH
Confidence 3468999999999888763211 2346788999999865221 23468899974 66677778899999999999999
Q ss_pred HHHHHHhhhhhhhhhhhHHHHHHHHHHhccccccCCcccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCe-eEEEeh
Q 002932 320 EALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQK-CEKLML 398 (864)
Q Consensus 320 ~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~f~sD~~p~LlaldA~v~l~s~~g-~R~vpl 398 (864)
+.+.+.- +. -+...++. -+||||++++.... |-..+.-.+ -.+++...+| .++++-
T Consensus 130 ~~l~~~G----------l~----Gle~~~gi----PgTVGGav~~NaGg-yGg~~~d~v----~~vevV~~~G~i~~~~~ 186 (322)
T 3tx1_A 130 KFALNES----------LS----GLEFACGI----PGSIGGALHMNAGA-YGGEISDVL----EAATVLTQTGELKKLKR 186 (322)
T ss_dssp HHHHHTT----------EE----SCGGGTTC----CSBHHHHHHHTCEE-TTEEHHHHE----EEEEEECTTSCEEEEEG
T ss_pred HHHHHcC----------Cc----ccccCCCC----cchhHHHHHhCccC-cccchHhhE----EEEEEEcCCCCEEEech
Confidence 9866431 00 01112222 28999999764331 111222222 1344445555 455666
Q ss_pred hh-hhc-C-CCCC-CCceEEEEEcCCC
Q 002932 399 EE-FLE-R-PPLD-SRSILLSVEIPCW 421 (864)
Q Consensus 399 ~d-F~~-~-~~l~-~~Eii~~I~iP~~ 421 (864)
+| +|. + ..+. .+.||+++.+...
T Consensus 187 ~~~~~~yR~s~~g~~~~IIt~~tl~L~ 213 (322)
T 3tx1_A 187 SELKAAYRFSTIAEKNYIVLDATFSLA 213 (322)
T ss_dssp GGCC--CC-CTTTGGGCEEEEEEEECE
T ss_pred HHcCcchhhcccCCCCEEEEEEEEEEE
Confidence 66 333 2 2222 2458887776543
No 50
>3i9v_3 NADH-quinone oxidoreductase subunit 3; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_3* 2fug_3* 3iam_3* 3ias_3* 3m9s_3*
Probab=96.34 E-value=0.0021 Score=78.44 Aligned_cols=103 Identities=23% Similarity=0.379 Sum_probs=70.6
Q ss_pred EEEEEECCEEEEEecCCCCCcHHHHHhhccCCcccccCC------CCCCCCccEEEEeec--CCC-------ccc----C
Q 002932 13 SVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGC------GEGGCGACVVLLSKY--NPE-------LDQ----L 73 (864)
Q Consensus 13 ~i~~~lNg~~~~~~~~~~~~~Ll~~LR~~~~l~g~K~gC------~~G~CGaCtV~~~~~--~~~-------~~~----~ 73 (864)
+++|+|||+.+++ .+++|||+.++.. |+. .-.-| ..|.|+.|.|.|... +.. .|+ .
T Consensus 1 mv~i~idg~~~~v---~~g~til~a~~~~-gi~-ip~~C~~~~~~~~G~C~~C~V~v~~~~~~~~g~~~~~~~G~~~~~~ 75 (783)
T 3i9v_3 1 MVRVKVNDRIVEV---PPGTSVMDAVFHA-GYD-VPLFCSEKHLSPIGACRMCLVRIGLPKKGPDGKPLLNEKGEPEIQW 75 (783)
T ss_dssp CEEEECSSCEEEE---CTTCBHHHHHHHT-TCC-CCCSSCCTTSCCCCCSCCSEEEEECC-----------------CCB
T ss_pred CeEEEECCEEEEe---CCCChHHHHHHHh-CCC-ccccCCCCCCCCCcccCCcEEEeccccccccccccccccccccccc
Confidence 4899999998876 4799999999864 543 23345 899999999999521 100 010 1
Q ss_pred CceeecccccchhhccCceeEEecCCCCCCCCcc----hHhHHHHhcCCCCCCCCChHH
Q 002932 74 EDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFH----PIHQRFAGFHASQCGFCTPGM 128 (864)
Q Consensus 74 ~~~~v~sCl~p~~~~~g~~i~TvEgl~~~~~~~h----~iq~a~~~~~~~qCG~CtPG~ 128 (864)
..+.+.||.+|+. +|+.|.|- ..... -+-+-|..+|-.-|..|..|=
T Consensus 76 ~~~~~~aC~t~v~--~gm~v~t~------~~~~~~~r~~~le~ll~nhp~dC~~C~~~g 126 (783)
T 3i9v_3 76 QPKLAASCVTAVA--DGMVVDTL------SDVVREAQAGMVEFTLLNHPLDCPTCDKGG 126 (783)
T ss_dssp CSSCEETTTCBCC--SSEEEESS------SHHHHHHHHHHHHHHHTSCCCCTTTCTTGG
T ss_pred CCCcccccCCCCC--CCCEEEEC------CHHHHHHHHHHHHHHHhcCCCCCccCCCCC
Confidence 2367899999975 69999873 11222 244556678888999998764
No 51
>2y5c_A Adrenodoxin-like protein, mitochondrial; electron transport, iron-sulfur cluster biogenesis; 1.70A {Homo sapiens}
Probab=96.13 E-value=0.0071 Score=55.14 Aligned_cols=50 Identities=26% Similarity=0.501 Sum_probs=40.2
Q ss_pred EEEEE-ECCEEEEEecCCCCCcHHHHHhhccCCcccccCCCC-CCCCccEEEEee
Q 002932 13 SVVFA-VNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGE-GGCGACVVLLSK 65 (864)
Q Consensus 13 ~i~~~-lNg~~~~~~~~~~~~~Ll~~LR~~~~l~g~K~gC~~-G~CGaCtV~~~~ 65 (864)
+|+|. -||+.++++ +.++++||+.+++. |+. ....|+. |.||.|.|.|..
T Consensus 7 ~v~~~~~~g~~~~~~-~~~g~tlL~aa~~~-gi~-i~~~C~g~G~CgtC~v~v~~ 58 (109)
T 2y5c_A 7 NVVFVDRSGQRIPVS-GRVGDNVLHLAQRH-GVD-LEGACEASLACSTCHVYVSE 58 (109)
T ss_dssp EEEEECTTSCEEEEE-EETTCBHHHHHHHT-TCC-CCCTTSSSSSCCTTEEEECH
T ss_pred EEEEEcCCCCEEEEE-ECCCCcHHHHHHHc-CCC-CCcCCCCCcCcCccEEEECC
Confidence 45553 489987776 68899999999875 765 7889987 999999999853
No 52
>2bt6_A Adrenodoxin 1; ruthenium(II) bipyridyl complex, intramolecular electron TRA electron transport, metal-binding; HET: RUA; 1.50A {Bos taurus} SCOP: d.15.4.1 PDB: 1ayf_A 3n9y_C* 2jqr_B* 3na0_C*
Probab=96.04 E-value=0.0056 Score=55.72 Aligned_cols=49 Identities=18% Similarity=0.447 Sum_probs=39.4
Q ss_pred EEEEE-ECCEEEEEecCCCCCcHHHHHhhccCCcccc--cCCCC-CCCCccEEEEe
Q 002932 13 SVVFA-VNGEKFEVSSVDPSTTLLEFLRYHTRFKSVK--LGCGE-GGCGACVVLLS 64 (864)
Q Consensus 13 ~i~~~-lNg~~~~~~~~~~~~~Ll~~LR~~~~l~g~K--~gC~~-G~CGaCtV~~~ 64 (864)
+|+|. -+|+.++++ +.++++||+.+++. |+. .. ..|+. |.||.|.|.|.
T Consensus 8 ~V~~~~~~g~~~~v~-~~~g~tLL~aa~~~-gi~-i~~~~~Cgg~G~CgtC~v~v~ 60 (108)
T 2bt6_A 8 TVHFINRDGETLTTK-GKIGDSLLDVVVQN-NLD-IDGFGACEGTLACSTCHLIFE 60 (108)
T ss_dssp EEEEECTTSCEEEEE-EETTCBHHHHHHHT-TCC-CTTTTTTSSSSSBSTTEEECC
T ss_pred EEEEECCCCCEEEEE-ECCCChHHHHHHHc-CCC-CCcccCCCCCcCcCCCEEEEC
Confidence 45555 469978887 68899999999875 654 66 89975 99999999995
No 53
>1doi_A 2Fe-2S ferredoxin; halophilic protein, redox protein, iron-sulfur, electron transport; 1.90A {Haloarcula marismortui} SCOP: d.15.4.1 PDB: 1e0z_A* 1e10_A
Probab=96.03 E-value=0.0034 Score=59.17 Aligned_cols=49 Identities=14% Similarity=0.371 Sum_probs=39.7
Q ss_pred eEEEEEECCEEEEEecCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEe
Q 002932 12 HSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLS 64 (864)
Q Consensus 12 ~~i~~~lNg~~~~~~~~~~~~~Ll~~LR~~~~l~g~K~gC~~G~CGaCtV~~~ 64 (864)
.+|+|..||+. +++ +++++|||+.|++. |+. ...+|+.|.||.|.|.|.
T Consensus 28 ~~i~i~~~g~~-~v~-v~~g~tlL~aa~~~-Gi~-i~~~C~~G~CgtC~v~v~ 76 (128)
T 1doi_A 28 SDMDLDDEDYG-SLE-VNEGEYILEAAEAQ-GYD-WPFSCRAGACANCAAIVL 76 (128)
T ss_dssp HHSCCCTTTEE-EEE-CCTTSCHHHHHHHT-TCC-CCCSSSSSSSSTTEEEEE
T ss_pred cEEEEEeCCcE-EEE-ECCCCcHHHHHHHc-CCC-CccCCCccCCCCCEeEEe
Confidence 34677889962 444 57899999999875 775 889999999999999984
No 54
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=95.80 E-value=0.0036 Score=70.81 Aligned_cols=102 Identities=11% Similarity=0.193 Sum_probs=71.6
Q ss_pred ceEEecCCHHHHHHHHhhhcCCCCCcceEEccCccceEeeecccCceeeeCCCCccccceEecCCcEEecccccHHHHHH
Q 002932 241 GSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIE 320 (864)
Q Consensus 241 ~~~~~P~tl~eal~ll~~~~~~~~~~a~lvaGgTdl~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~~ 320 (864)
..+++|+|.+|+.++++. ....++++|||+....-.......+||++++..+..+..++..++++|++++.+|.+
T Consensus 22 ~~v~~P~s~~ev~~~v~~-----a~~v~~~G~G~s~~~~~~~~~~g~vi~l~~l~~i~~~d~~~~~v~v~aG~~l~~l~~ 96 (422)
T 2vfr_A 22 KELLRPHSLDALRALVAD-----SARVRVLGSGHSFNEIAEPGDGGVLLSLAGLPSVVDVDTAARTVRVGGGVRYAELAR 96 (422)
T ss_dssp SSCBCCSSHHHHHHHHHH-----CSSEEECSSCCCCSSTTCCCTTCEEECSTTSCCCEEEETTTTEEEEETTCBHHHHHH
T ss_pred CEEEeCCCHHHHHHHHHh-----CCCEEEEECCCCCCCCccCCCCcEEEEhhhCCCcEEEcCCCCEEEEcCCCCHHHHHH
Confidence 346789999999999984 256788899987654211123568999987655444455567899999999999999
Q ss_pred HHHHHhhhhhhhhhhhHHHHHHHHHHhccccccCCcccCCccccc
Q 002932 321 ALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMA 365 (864)
Q Consensus 321 ~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~a 365 (864)
.+.+.- + .+..+.--+.+||||+|++.
T Consensus 97 ~l~~~G----------l--------~l~~~~~~~~~tvGG~i~~~ 123 (422)
T 2vfr_A 97 VVHARG----------L--------ALPNMASLPHISVAGSVATG 123 (422)
T ss_dssp HHHHTT----------E--------ECSCCCSSSCSBHHHHHHHT
T ss_pred HHHHcC----------C--------cccCCCCCCCeeHHHHHhcC
Confidence 876430 0 11122223568999999886
No 55
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=95.70 E-value=0.039 Score=63.42 Aligned_cols=155 Identities=12% Similarity=0.059 Sum_probs=95.0
Q ss_pred ceEEecCCHHHHHHHHhhhcCCC--CCcceEEccCccceEeeecccCceeeeCCCCccccceEecCCcEEecccccHHHH
Q 002932 241 GSWHSPISVQELRNVLESVEGSN--QISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKA 318 (864)
Q Consensus 241 ~~~~~P~tl~eal~ll~~~~~~~--~~~a~lvaGgTdl~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l 318 (864)
..+++|+|.+|+.++++.... . .-...+++||+++.-.. ......+||++++..+..+..+++.++++|++++.+|
T Consensus 44 ~~vv~P~s~eev~~~v~~a~~-~~~~~~v~~~G~G~s~~~~~-~~~~gvvIdl~~l~~i~~~d~~~~~v~v~aGv~l~~L 121 (481)
T 4feh_A 44 ANVLRTPDAEMIVKAVARVAE-SGGGRGAIARGLGRSYGDNA-QNGGGLVIDMTPLNTIHSIDADTKLVDIDAGVNLDQL 121 (481)
T ss_dssp EEEEECSCHHHHHHHHHHHHT-TTCTTCEEEECSSCSSSSTT-CCTTSEEEECTTCCCEEEEETTTTEEEEETTCBHHHH
T ss_pred CEEEeCCCHHHHHHHHHHHHH-cCCCceEEEEeCCcCCCCCC-CCcCeEEEECccCCCceEEcCCCCEEEEcCCccHHHH
Confidence 467899999999988874321 1 24578899999872110 0135689999886554444455668999999999999
Q ss_pred HHHHHHHhhhhhhhhhhhHHHHHHHHHHhccccccCCcccCCccccccCC------CCCCchHHHHHhcCcEEEEEeCCe
Q 002932 319 IEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRK------HFPSDVATVLLGAGAMVNIMTGQK 392 (864)
Q Consensus 319 ~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~------~f~sD~~p~LlaldA~v~l~s~~g 392 (864)
.+.+.+.- ..++. .+.+ .-+||||+|++..-. +.-+|.+ -.+++...+|
T Consensus 122 ~~~l~~~G--------l~l~~---------~~g~-~~~tvGGaia~~a~G~~~~~~G~~~d~V-------~~~evV~~dG 176 (481)
T 4feh_A 122 MKAALPFG--------LWVPV---------LPGT-RQVTVGGAIACDIHGKNHHSAGSFGNHV-------RSMDLLTADG 176 (481)
T ss_dssp HHHHGGGT--------EECSC---------CCSC-SCCBHHHHHHTTCCCTTHHHHCCGGGGE-------EEEEEECTTS
T ss_pred HHHHHHcC--------CEEEE---------eCCc-CccccCCccccccCCCCcccCCCccceE-------eEEEEEeCCC
Confidence 99865320 00110 1223 246999999875321 1112211 2456666666
Q ss_pred -eEEEehh----hhhc--CCCCCCCceEEEEEcCCCC
Q 002932 393 -CEKLMLE----EFLE--RPPLDSRSILLSVEIPCWD 422 (864)
Q Consensus 393 -~R~vpl~----dF~~--~~~l~~~Eii~~I~iP~~~ 422 (864)
.+++.-+ |+|. ...+..--||+++.|...+
T Consensus 177 ~v~~~s~~~~~~dLf~a~rgs~G~~GIIt~~tl~l~p 213 (481)
T 4feh_A 177 EIRHLTPTGEDAELFWATVGGNGLTGIIMRATIEMTP 213 (481)
T ss_dssp CEEEECSSSTTHHHHHHHTTCTTTTCEEEEEEEECEE
T ss_pred CEEEeCCCCCChHHHHHhhccCCCceEEEEEEEEEEe
Confidence 4455544 6442 3334455699998886544
No 56
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=95.43 E-value=0.013 Score=70.14 Aligned_cols=109 Identities=12% Similarity=0.065 Sum_probs=75.2
Q ss_pred ceEEecCCHHHHHHHHhhhcCCCCCcceEEccCccceE--eee--cccCceeeeCCCCccccceEecCCcEEecccccHH
Q 002932 241 GSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGY--YKE--VEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTIS 316 (864)
Q Consensus 241 ~~~~~P~tl~eal~ll~~~~~~~~~~a~lvaGgTdl~v--~k~--~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~ 316 (864)
.-.++|+|.+|+.++++-... ..-...+.+|||++.- ... ....-.+||++++..+..|..++..++++|+|++.
T Consensus 207 ~aVV~P~s~eeV~~iv~~A~~-~~ipVvprGgGTsl~GG~~~~~~~~~ggVvLDlsrMnrIleiD~~~~~atVeaGv~~~ 285 (658)
T 4bby_A 207 DIVLWPTCHDDVVKIVNLACK-YNLCIIPIGGGTSVSYGLMCPADETRTIISLDTSQMNRILWVDENNLTAHVEAGITGQ 285 (658)
T ss_dssp SEEEECCSHHHHHHHHHHHHH-TTCEEEEESSCCCSSSTTCCCTTCCSCEEEEECTTCCCEEEEETTTTEEEEETTCBHH
T ss_pred CEEEeeCCHHHHHHHHHHHHH-CCCeEEEECCCcCCCCCCCCCCCCCCcEEEEECccCCCcEEEcCCCCEEEEecCchHH
Confidence 457899999999998863210 1234667799998742 111 12234789999876665666678899999999999
Q ss_pred HHHHHHHHHhhhhhhhhhhhHHHHHHHHHHhccccccCCcccCCccccccC
Q 002932 317 KAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQR 367 (864)
Q Consensus 317 ~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp 367 (864)
+|.+.++++--.+ | -.|+=.+.+||||||++.+.
T Consensus 286 ~L~~~L~~~Gl~l--------p---------~dP~S~~~aTIGG~iAtna~ 319 (658)
T 4bby_A 286 ELERQLKESGYCT--------G---------HEPDSLEFSTVGGWISTRAS 319 (658)
T ss_dssp HHHHHHHHHTEEC--------C---------CCCTTTTTCBHHHHHHHTCC
T ss_pred HHHHHHHHcCCcc--------C---------CCCCCccccEEeehhhcCCC
Confidence 9999876541111 1 13455678999999998765
No 57
>3ah7_A [2Fe-2S]ferredoxin; [2Fe-2S] cluster, iron-sulfur cluster biosynthes pseudomonas, metal binding protein; 1.90A {Pseudomonas putida}
Probab=95.13 E-value=0.026 Score=51.64 Aligned_cols=42 Identities=31% Similarity=0.683 Sum_probs=33.4
Q ss_pred CCEEEEEecCCCCCcHHHHHhhccCCcccccCCC-CCCCCccEEEEee
Q 002932 19 NGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCG-EGGCGACVVLLSK 65 (864)
Q Consensus 19 Ng~~~~~~~~~~~~~Ll~~LR~~~~l~g~K~gC~-~G~CGaCtV~~~~ 65 (864)
||+. ++ +.+++|||+.+++. |+. ....|+ .|.||.|.|.|..
T Consensus 15 ~~~~--v~-~~~g~tlL~aa~~~-Gi~-i~~~C~g~G~CgtC~v~v~~ 57 (113)
T 3ah7_A 15 EGLT--VE-VKPGTNILELAHDH-HIE-MESACGGVKACTTCHCIVRK 57 (113)
T ss_dssp TCEE--EE-CCTTCBHHHHHHHT-TCC-CCCTTCSSSSCSTTEEEEEE
T ss_pred CCeE--EE-ECCCCcHHHHHHHc-CCC-CCcCCCCCCCcCCCEEEEcC
Confidence 4454 44 57899999999875 775 789998 6999999999853
No 58
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=95.13 E-value=0.019 Score=62.63 Aligned_cols=48 Identities=21% Similarity=0.446 Sum_probs=38.9
Q ss_pred EEEEEC---CEEEEEecCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEe
Q 002932 14 VVFAVN---GEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLS 64 (864)
Q Consensus 14 i~~~lN---g~~~~~~~~~~~~~Ll~~LR~~~~l~g~K~gC~~G~CGaCtV~~~ 64 (864)
.+++++ |..++++ +++++|||+.+++. |+. ....|+.|.||.|.|.|.
T Consensus 4 ~~v~~~~~~~~~~~~~-~~~g~tll~a~~~~-gi~-i~~~C~~g~Cg~C~v~v~ 54 (338)
T 1krh_A 4 HQVALQFEDGVTRFIC-IAQGETLSDAAYRQ-QIN-IPMDCREGECGTCRAFCE 54 (338)
T ss_dssp EEEEEECTTSCEEEEE-ECTTCCHHHHHHHT-TCC-CSCSCSSSSSCTTEEEEE
T ss_pred eEEEEEEcCCCcEEEE-eCCCCcHHHHHHHc-CCC-cccCCCCcCCCCCEEEEe
Confidence 445555 6667776 68899999999875 775 889999999999999983
No 59
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=94.89 E-value=0.02 Score=67.34 Aligned_cols=109 Identities=13% Similarity=0.099 Sum_probs=71.5
Q ss_pred ceEEecCCHHHHHHHHhhhcCCCCCcceEEccCccceE--eeec-ccCceeeeCCCCccccceEecCCcEEecccccHHH
Q 002932 241 GSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGY--YKEV-EHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISK 317 (864)
Q Consensus 241 ~~~~~P~tl~eal~ll~~~~~~~~~~a~lvaGgTdl~v--~k~~-~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~ 317 (864)
..+++|+|.+|+.++++-... ..-...+.+|||.+.- .... ....++||++++..+..|..++..++++|++++.+
T Consensus 139 ~~vv~P~s~eeV~~iv~~a~~-~~~pv~~~GgGts~~gg~~~~~~~~g~vvidl~~mn~I~~id~~~~~v~v~aGv~~~~ 217 (584)
T 2uuu_A 139 DLIVLPHSHEEVERLVQLAHK-YNVVIIPMGGGSNIVGAIEPVSNERFTVSIDMRRMNKVLWVDRREMTACIQVGIMGPE 217 (584)
T ss_dssp SEEECCCSHHHHHHHHHHHHH-HTCEEEEESSCCCSSCTTSCCCCSSCEEEEECTTCCCEEEEETTTTEEEEETTCBHHH
T ss_pred CEEEeCCCHHHHHHHHHHHHH-cCCeEEEEeCCCCCCCCCcccCCCCCEEEEECCCCCccEEEcCCCCEEEECCCCcHHH
Confidence 357899999999988763210 1345778899999752 1211 12346899987655544455567899999999999
Q ss_pred HHHHHHHHhhhhhhhhhhhHHHHHHHHHHhccccccCCcccCCccccccC
Q 002932 318 AIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQR 367 (864)
Q Consensus 318 l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp 367 (864)
|.+.+.+.-- .+ -..|.-...+||||||++...
T Consensus 218 l~~~l~~~Gl--------~~---------~~~p~s~~~~tvGG~ia~na~ 250 (584)
T 2uuu_A 218 LEKQLHKQGV--------SL---------GHDPDSFEFSTLGGWLATCSS 250 (584)
T ss_dssp HHHHHHHTTE--------EC---------CCCCTTGGGCBHHHHHHHTCC
T ss_pred HHHHHHHcCC--------ee---------CcCCCccCCeeEeeeccCCCC
Confidence 9998765310 01 012222345899999987754
No 60
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=94.84 E-value=0.013 Score=67.45 Aligned_cols=106 Identities=18% Similarity=0.202 Sum_probs=73.0
Q ss_pred ceEEecCCHHHHHHHHhhhcCCCCCcceEEccCccceE--eeecccCceeeeCCCCccccceEecCCcEEecccccHHHH
Q 002932 241 GSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGY--YKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKA 318 (864)
Q Consensus 241 ~~~~~P~tl~eal~ll~~~~~~~~~~a~lvaGgTdl~v--~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l 318 (864)
..+++|+|.+|+.++++-... ..-...+.+|||++.- .. .....+||++++..+..|..++..++++|++++.+|
T Consensus 53 ~~vv~P~s~eeV~~~v~~a~~-~~~pv~~~GgGt~~~g~~~~--~~ggvvIdl~~m~~i~~id~~~~~v~V~aGv~~~~l 129 (476)
T 3pm9_A 53 PLVLRPGSTEEVVAICKLANE-ARVALVPQGGNTGLVGGQTP--HNGEVVISLKRMDKIREIDTSSNTITVEAGAILQRV 129 (476)
T ss_dssp SCEECCCSHHHHHHHHHHHHH-HTCCEEEESSSCCSSSTTCC--CSSCEEEECTTCCCEEEEETTTTEEEEETTCBHHHH
T ss_pred CEEEecCCHHHHHHHHHHHHH-cCCeEEEEeCCCCCCCCccC--CCCcEEEEeeCCCceEEEcCCCCeEEECCCcCHHHH
Confidence 357899999999888763211 1346788899999841 11 123689999986655555566788999999999999
Q ss_pred HHHHHHHhhhhhhhhhhhHHHHHHHHHHhc-cccccCCcccCCccccccC
Q 002932 319 IEALKEETKEFHSEALMVFKKIAGHMEKIA-SRFIRNSASVGGNLVMAQR 367 (864)
Q Consensus 319 ~~~l~~~~~~~~~~~~~~~~~L~~~l~~ia-s~qIRN~aTiGGNI~~asp 367 (864)
.+.+.+.-- .++ .+.-...+|||||+++...
T Consensus 130 ~~~l~~~Gl------------------~~~~~~~s~~~~tvGG~ia~nag 161 (476)
T 3pm9_A 130 QEKAAEVDR------------------LFPLSLGAQGSCTIGGNLSTNAG 161 (476)
T ss_dssp HHHHHHTTE------------------ECCCCCTTTTTCBHHHHHHHTCC
T ss_pred HHHHHHhCC------------------ccCCCCCCCCcEEEccccCCCCC
Confidence 998764310 111 2333557999999986544
No 61
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=94.48 E-value=0.053 Score=59.79 Aligned_cols=103 Identities=12% Similarity=0.090 Sum_probs=68.3
Q ss_pred CceEEecCCHHHHHHHHhhhcCCCCCcceEEccCccceEeeecccCceeeeCCCCccccceEec----CCcEEecccccH
Q 002932 240 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRD----QTGIEIGATVTI 315 (864)
Q Consensus 240 ~~~~~~P~tl~eal~ll~~~~~~~~~~a~lvaGgTdl~v~k~~~~~~~lIdl~~I~EL~~I~~~----~~~l~IGA~vTl 315 (864)
...+++|+|.+|+.++++.... ..-...+++|||.+.+-.. ....+|+++ |+.|+.+ +..+++||++++
T Consensus 31 a~~vv~p~s~eel~~~v~~a~~-~~ipv~vlGgGSNll~~d~--~~GvVI~l~----~~~i~v~~~~~~~~v~v~AG~~~ 103 (357)
T 3i99_A 31 AAQLVVAESIDDLKALYCSAEW-ASLPKLIIGKGSNMLFTCH--YTGMIVVNR----LNGIEHQQDDDYHRLHVAGGEDW 103 (357)
T ss_dssp EEEEEEECSHHHHHHHHSSSTT-TTSCEEEESSCTTEEECSC--EEEEEEEEC----CCCEEEEECSSEEEEEEETTSBH
T ss_pred ceEEEEECCHHHHHHHHHHHHH-cCCCEEEECCCcCcccCCC--CCeEEEEcC----CCceEEeccCCceEEEEeCCCcH
Confidence 4578999999999999873211 2345788999998865322 345788885 4445443 237999999999
Q ss_pred HHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHhccccccCCcccCCccccccC
Q 002932 316 SKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQR 367 (864)
Q Consensus 316 ~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp 367 (864)
.+|.+.+.+. .+. -+...++.. +||||++++...
T Consensus 104 ~~l~~~a~~~----------Gl~----GlE~l~gIP----GtVGGav~~NaG 137 (357)
T 3i99_A 104 PSLVSWCVEQ----------GIG----GLENLALIP----GCAGSAPIQNIG 137 (357)
T ss_dssp HHHHHHHHHT----------TCT----TCGGGTTCC----SBGGGTTTTTCE
T ss_pred HHHHHHHHHc----------CCc----CccccCCCC----chhHHHHHhchh
Confidence 9999986543 010 122233333 799999987543
No 62
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=94.27 E-value=0.11 Score=60.22 Aligned_cols=156 Identities=11% Similarity=0.099 Sum_probs=91.7
Q ss_pred CceEEecCCHHHHHHHHhhhcCCCCCcceEEccCccce-E-eeecc--cCceeeeCC-CCccccceEec--CCcEEeccc
Q 002932 240 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMG-Y-YKEVE--HYDKYIDIR-YIPELSVIRRD--QTGIEIGAT 312 (864)
Q Consensus 240 ~~~~~~P~tl~eal~ll~~~~~~~~~~a~lvaGgTdl~-v-~k~~~--~~~~lIdl~-~I~EL~~I~~~--~~~l~IGA~ 312 (864)
...+++|+|.+|+.++++.... .+-..++++||+++. + ...+. ....+||++ ++..+ .|..+ ...+++||+
T Consensus 30 P~~vv~P~s~eEV~~~Vk~A~~-~~~pv~v~GgGhs~~~l~~~gG~~~~~GVvIdls~~Ln~I-~vD~~~~~~tVtV~AG 107 (540)
T 3js8_A 30 DVWTCAPRSADEVVKVANWAKD-NGYKVRARGMMHNWSPLTLAAGVSCPAVVLLDTTRYLTAM-SIDASGPVAKVTAQAG 107 (540)
T ss_dssp EEEEECCSSHHHHHHHHHHHHH-HTCEEEEECSCCCSSCSSCCTTCSSCSEEEEETTTTCCCE-EEECSSSSEEEEEETT
T ss_pred ccEEEEcCCHHHHHHHHHHHHH-cCCeEEEEeCCCCcccccccCCCCCCCeEEEECcCcCCCE-EECCCCCccEEEEccC
Confidence 3467999999999988763211 134678889999984 2 22211 234689995 45544 33332 258999999
Q ss_pred ccHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHhc-cccccCCcccCCcccccc-CC---------------CCCCchH
Q 002932 313 VTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIA-SRFIRNSASVGGNLVMAQ-RK---------------HFPSDVA 375 (864)
Q Consensus 313 vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ia-s~qIRN~aTiGGNI~~as-p~---------------~f~sD~~ 375 (864)
+++.+|.+.+.+.- + .+. .+.+ ..+||||.|++.. .. +..+|
T Consensus 108 v~l~~L~~~L~~~G----------L--------~l~~~~gi-~~~TVGGaia~gagG~~~~~~G~~~~~g~~~G~~~D-- 166 (540)
T 3js8_A 108 ITMEALLTGLEKAG----------L--------GVTAAPAP-GDLTLGGVLAINGHGTAIPAKGERRLAGASYGSISN-- 166 (540)
T ss_dssp SBHHHHHHHHHHTT----------E--------ECSCCCSC-SCSBHHHHHHTTCCCCBCCCTTCCCCTTCCSSCGGG--
T ss_pred CCHHHHHHHHHHcC----------C--------EEEecCCC-CCeEEcccccCCCCcccccccccccccccccccHHH--
Confidence 99999999876431 0 011 1223 4589999997642 21 22233
Q ss_pred HHHHhcCcEEEEEeCC----eeEEEehh--hhhc-CCCCCCCceEEEEEcCCCC
Q 002932 376 TVLLGAGAMVNIMTGQ----KCEKLMLE--EFLE-RPPLDSRSILLSVEIPCWD 422 (864)
Q Consensus 376 p~LlaldA~v~l~s~~----g~R~vpl~--dF~~-~~~l~~~Eii~~I~iP~~~ 422 (864)
..++.+|.+.+.. ..+++.-+ ||+. ...+..+ ||+++.+...+
T Consensus 167 ---~V~~levV~adG~~~~~~i~~~s~~~~DL~a~r~G~G~g-IVTevtlrl~P 216 (540)
T 3js8_A 167 ---LVLSLTAVVYDKASGAYALRKFARNDPQIAPLLAHVGRS-LIVEATLQAAP 216 (540)
T ss_dssp ---GEEEEEEEEEETTTTEEEEEEEETTSGGGHHHHTCTTSS-CEEEEEEEEEE
T ss_pred ---hEEEEEEEcCCCCCceeeEEEeCCCChhHHHHHhcCCCe-EEEEEEEEEEE
Confidence 2344555554443 24555432 4432 2223445 99999886544
No 63
>2pia_A Phthalate dioxygenase reductase; HET: FMN; 2.00A {Burkholderia cepacia} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=94.09 E-value=0.038 Score=59.92 Aligned_cols=48 Identities=23% Similarity=0.499 Sum_probs=36.3
Q ss_pred EEEEECCEEEEEecCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEe
Q 002932 14 VVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLS 64 (864)
Q Consensus 14 i~~~lNg~~~~~~~~~~~~~Ll~~LR~~~~l~g~K~gC~~G~CGaCtV~~~ 64 (864)
+++++.+...+++ +.++++||+.|++. |+. ...+|+.|.||.|.|-|.
T Consensus 238 ~~v~~~~~~~~~~-~~~~~~ll~a~~~~-g~~-~~~~C~~G~Cg~C~~~v~ 285 (321)
T 2pia_A 238 FTVRLSRSGTSFE-IPANRSILEVLRDA-NVR-VPSSCESGTCGSCKTALC 285 (321)
T ss_dssp EEEEETTTCCEEE-ECTTSCHHHHHHHT-TCC-CCCSCSSSSSCTTEEEEE
T ss_pred EEEEEeCCCeEEE-ECCCCcHHHHHHHc-CCC-CCCCCCCCCCCCCEEEEe
Confidence 4445544334444 46899999999864 776 889999999999999884
No 64
>3n9z_C Adrenodoxin; cytochrome P450, 22-hydroxycholesterol, cholesterol SIDE CHA cleavage, structural genomics; HET: HEM HC9; 2.17A {Homo sapiens} SCOP: d.15.4.1 PDB: 3na1_C* 3p1m_A* 1l6u_A 1l6v_A 1e6e_B* 1cje_A
Probab=93.96 E-value=0.012 Score=54.97 Aligned_cols=49 Identities=18% Similarity=0.450 Sum_probs=12.1
Q ss_pred EEEEE-ECCEEEEEecCCCCCcHHHHHhhccCCcccc--cCCC-CCCCCccEEEEe
Q 002932 13 SVVFA-VNGEKFEVSSVDPSTTLLEFLRYHTRFKSVK--LGCG-EGGCGACVVLLS 64 (864)
Q Consensus 13 ~i~~~-lNg~~~~~~~~~~~~~Ll~~LR~~~~l~g~K--~gC~-~G~CGaCtV~~~ 64 (864)
+|+|. -+|+.++++ +.++++|++.+++. |+. .. ..|+ .|.||.|-|.|.
T Consensus 7 ~Vtf~~~~G~~~~v~-~~~G~tLl~aa~~~-gi~-i~g~~~CgG~g~CgtC~v~v~ 59 (123)
T 3n9z_C 7 TVHFINRDGETLTTK-GKVGDSLLDVVVEN-NLD-IDGFGACEGTLACSTCHLIFE 59 (123)
T ss_dssp ---------------------------------------CTTCSSSSCSTTBC---
T ss_pred EEEEEeCCCCEEEEE-ECCCCcHHHHHHHc-CCC-CCcCCCCCCCCEeCCCeeEEe
Confidence 46665 589888887 78999999999875 665 45 7898 899999999885
No 65
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=93.84 E-value=0.037 Score=64.83 Aligned_cols=82 Identities=21% Similarity=0.093 Sum_probs=55.8
Q ss_pred ceEEecCCHHHHHHHHhhhcCCCCCcceEEccCccceE--eeec---ccCceeeeCCCCccccceEecCCcEEecccccH
Q 002932 241 GSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGY--YKEV---EHYDKYIDIRYIPELSVIRRDQTGIEIGATVTI 315 (864)
Q Consensus 241 ~~~~~P~tl~eal~ll~~~~~~~~~~a~lvaGgTdl~v--~k~~---~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl 315 (864)
...++|+|.+|+.++++.... ..-...+.+|||++.- .... .+..++||++++..+..|. ++..++++|++++
T Consensus 47 ~~Vv~P~s~~eV~~iv~~a~~-~~~~v~~~GgGt~~~G~~~~~~~~~~r~gvvIdl~rmn~I~~id-~~~~v~v~aGv~l 124 (571)
T 1f0x_A 47 LAVVFPGSLLELWRVLKACVT-ADKIILMQAANTGLTEGSTPNGNDYDRDVVIISTLRLDKLHVLG-KGEQVLAYPGTTL 124 (571)
T ss_dssp SEEECCSSHHHHHHHHHHHHH-TTCEEEEESSCCCSSSTTSCCBSCCSSCEEEEECTTCCCEEEET-TTTEEEECTTCBH
T ss_pred cEEEeeCCHHHHHHHHHHHHH-cCCCEEEECCCcCCCCCccCCCcCCcCceEEEECcccCCceeEC-CCCeEEEcCCcCH
Confidence 457899999999988763211 1345677899999742 1111 1136899998754333333 3467999999999
Q ss_pred HHHHHHHHH
Q 002932 316 SKAIEALKE 324 (864)
Q Consensus 316 ~~l~~~l~~ 324 (864)
.+|.+.+.+
T Consensus 125 ~~L~~~l~~ 133 (571)
T 1f0x_A 125 YSLEKALKP 133 (571)
T ss_dssp HHHHHHHGG
T ss_pred HHHHHHHHh
Confidence 999998754
No 66
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=93.72 E-value=0.054 Score=63.46 Aligned_cols=109 Identities=13% Similarity=0.077 Sum_probs=69.6
Q ss_pred ceEEecCCHHHHHHHHhhhcCCCCCcceEEccCccceEeeec---ccCceeeeC-CCCccccceEecCCcEEecccccHH
Q 002932 241 GSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEV---EHYDKYIDI-RYIPELSVIRRDQTGIEIGATVTIS 316 (864)
Q Consensus 241 ~~~~~P~tl~eal~ll~~~~~~~~~~a~lvaGgTdl~v~k~~---~~~~~lIdl-~~I~EL~~I~~~~~~l~IGA~vTl~ 316 (864)
.-+++|+|.+|+.++++-... ..-...+.+|||.+.+ ... .....+||+ +++..+..|..++..++++++|++.
T Consensus 72 ~~Vv~P~s~~eV~~iv~~a~~-~~~pv~~~g~Gt~~~~-gg~~p~~~~gvvidl~~~mn~il~id~~~~~v~v~aGv~~~ 149 (560)
T 1e8g_A 72 SAIVAPRNVADVQSIVGLANK-FSFPLWPISIGRNSGY-GGAAPRVSGSVVLDMGKNMNRVLEVNVEGAYCVVEPGVTYH 149 (560)
T ss_dssp SEEECCSSHHHHHHHHHHHHH-HTCCEEEESSCCCTTT-TTTCCSSTTCEEEECTTTCCCEEEEETTTTEEEECTTCBHH
T ss_pred cEEEeCCCHHHHHHHHHHHHH-cCCcEEEecCCCcCCc-CCCCCCcCCEEEEEchHhcCCeEEEcCCCCEEEEeCCCCHH
Confidence 457899999999988763210 1234556689998754 111 124689999 7654443344456789999999999
Q ss_pred HHHHHHHHHhhhhhhhhhhhHHHHHHHHHHhc-cccccCCcccCCccccccC
Q 002932 317 KAIEALKEETKEFHSEALMVFKKIAGHMEKIA-SRFIRNSASVGGNLVMAQR 367 (864)
Q Consensus 317 ~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ia-s~qIRN~aTiGGNI~~asp 367 (864)
+|.+.+.+.-- . + .++ .+.-.+.+|||||+++...
T Consensus 150 ~l~~~l~~~Gl--------~-~-------~~~~~p~~~~~~tigG~~~~~g~ 185 (560)
T 1e8g_A 150 DLHNYLEANNL--------R-D-------KLWLDVPDLGGGSVLGNAVERGV 185 (560)
T ss_dssp HHHHHHHHTTC--------T-T-------TEECCCCSSTTSBHHHHHHTTCB
T ss_pred HHHHHHHHcCC--------c-c-------ccCCCCCCCCccchhhhccCCCC
Confidence 99998764310 0 0 011 2344458999999875443
No 67
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=93.10 E-value=0.047 Score=63.34 Aligned_cols=106 Identities=13% Similarity=0.176 Sum_probs=68.1
Q ss_pred ceEEecCCHHHHHHHHhhhcCCCCCcceEEccCccceEeeec---ccCceeeeCCCCccccceEecCCcEEecccccHHH
Q 002932 241 GSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEV---EHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISK 317 (864)
Q Consensus 241 ~~~~~P~tl~eal~ll~~~~~~~~~~a~lvaGgTdl~v~k~~---~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~ 317 (864)
.-+++|+|.+|+.++++-... ..-...+++|||.+.+ ... .....+||++++..+..|..++..++++|++++.+
T Consensus 58 ~~vv~P~s~~ev~~~v~~a~~-~~~pv~~~g~G~~~~~-g~~~~~~~~gvvidl~~m~~i~~id~~~~~v~v~aGv~~~~ 135 (520)
T 1wvf_A 58 SAAVTATTVEQVQGVVKICNE-HKIPIWTISTGRNFGY-GSAAPVQRGQVILDLKKMNKIIKIDPEMCYALVEPGVTFGQ 135 (520)
T ss_dssp SEEEECCSHHHHHHHHHHHHH-HTCCEEEESSCCCTTT-TTTSCSSTTCEEEECTTCCCEEEEETTTTEEEECTTCCHHH
T ss_pred CEEEecCCHHHHHHHHHHHHH-CCCcEEEEcCCCCCCC-CCCCCCCCCeEEEECCCCCceEEECCCCCEEEECCCCCHHH
Confidence 458899999999888763210 1234567789998853 110 13468999987544433344467899999999999
Q ss_pred HHHHHHHHhhhhhhhhhhhHHHHHHHHHHhcc-ccccCCcccCCccccc
Q 002932 318 AIEALKEETKEFHSEALMVFKKIAGHMEKIAS-RFIRNSASVGGNLVMA 365 (864)
Q Consensus 318 l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias-~qIRN~aTiGGNI~~a 365 (864)
|.+.+.+.- .. ...+ +.-.+.+|||||+++.
T Consensus 136 l~~~l~~~G---------l~--------~~~~~~p~~~~~~igG~~~~~ 167 (520)
T 1wvf_A 136 MYDYIQENN---------LP--------VMLSFSAPSAIAGPVGNTMDR 167 (520)
T ss_dssp HHHHHHHTT---------CS--------EECCCCSSCTTCCHHHHHHTT
T ss_pred HHHHHHHcC---------Cc--------ccCCCCCCCCeeeeeecccCC
Confidence 999876531 00 0111 2233489999998543
No 68
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=93.04 E-value=0.045 Score=64.14 Aligned_cols=105 Identities=12% Similarity=0.124 Sum_probs=69.1
Q ss_pred ceEEecCCHHHHHHHHhhhcCCCCCcceEEccCccceE--eeec--ccCceeeeC-CCCccccceEe--cCCcEEecccc
Q 002932 241 GSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGY--YKEV--EHYDKYIDI-RYIPELSVIRR--DQTGIEIGATV 313 (864)
Q Consensus 241 ~~~~~P~tl~eal~ll~~~~~~~~~~a~lvaGgTdl~v--~k~~--~~~~~lIdl-~~I~EL~~I~~--~~~~l~IGA~v 313 (864)
..+++|+|.+|+.++++.... ..-..++++|||++.- .... .....+||+ +++..+ .|.. ++..++++|++
T Consensus 37 ~~vv~P~s~~ev~~~v~~a~~-~~~~v~~~G~G~s~~~~~l~~~~~~~~gvvIdl~~~l~~i-~vd~~~~~~~v~v~aGv 114 (561)
T 2i0k_A 37 TWVCSPKTPQDVVRLANWAHE-HDYKIRPRGAMAGWTPLTVEKGANVEKVILADTMTHLNGI-TVNTGGPVATVTAGAGA 114 (561)
T ss_dssp EEEECCSSHHHHHHHHHHHHH-HTCEEEEECCCCCCCTTSSCTTCCCTTEEEEECTTTSCCE-EEECCSSSCEEEEETTS
T ss_pred CEEEecCCHHHHHHHHHHHHH-CCCcEEEECCCCCcccccccCCCcCCCeEEEechhhCCce-EecCcCCccEEEEcCCC
Confidence 467999999999998863211 1346788899999742 1111 124579999 776554 4444 45789999999
Q ss_pred cHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHhccccccCCcccCCccccc
Q 002932 314 TISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMA 365 (864)
Q Consensus 314 Tl~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~a 365 (864)
++.+|.+.+.++- ..+| . .+.+ ..+||||.|++.
T Consensus 115 ~l~~L~~~l~~~G--------l~l~-------~--~~~~-~~~TvGG~i~~~ 148 (561)
T 2i0k_A 115 SIEAIVTELQKHD--------LGWA-------N--LPAP-GVLSIGGALAVN 148 (561)
T ss_dssp BHHHHHHHHHHTT--------EECS-------S--CCSC-TTCBHHHHHHTT
T ss_pred CHHHHHHHHHHcC--------Cccc-------c--cCCC-CCcccCCCcccC
Confidence 9999999876431 0011 1 1222 568999999764
No 69
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=92.66 E-value=0.093 Score=60.95 Aligned_cols=104 Identities=11% Similarity=0.099 Sum_probs=69.1
Q ss_pred ceEEecCCHHHHHHHHhhhcCCCCCcceEEccCccceEeeecc--cCceeeeCCCCccccceEe-----cC--CcEEecc
Q 002932 241 GSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVE--HYDKYIDIRYIPELSVIRR-----DQ--TGIEIGA 311 (864)
Q Consensus 241 ~~~~~P~tl~eal~ll~~~~~~~~~~a~lvaGgTdl~v~k~~~--~~~~lIdl~~I~EL~~I~~-----~~--~~l~IGA 311 (864)
.-.++|+|.+|+.++++-......-...+.+|||++. ... ....+||++++..+ .|.. ++ ..++++|
T Consensus 63 ~~vv~P~s~eeV~~iv~~a~~~~~~~v~~~GgGts~~---g~~~~~~gvvidl~~m~~i-~i~~~~~~~~~~~~~v~v~a 138 (524)
T 2exr_A 63 LAVVRPVGPEDIAGAVKAALRSDKLTVAARGNGHSIN---GQAMAEGGLVVDMSTTAEN-HFEVGYLSGGDATAFVDVSG 138 (524)
T ss_dssp SEEEECSSHHHHHHHHHHHHHSSSCCEEEESSSCCSS---STTCCTTSEEEEGGGGTTS-CEEEEECCSSSSSEEEEEET
T ss_pred CEEEecCCHHHHHHHHHHHHhhcCceEEEECCCcCCC---CcccCCCEEEEECcCCCCc-EEeecccCCCCCceEEEEeC
Confidence 4578999999999988742100123577889999974 211 23589999876555 4555 33 5799999
Q ss_pred cccHHHHHHH-HHHHhhhhhhhhhhhHHHHHHHHHHhccccccCCcccCCcccccc
Q 002932 312 TVTISKAIEA-LKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQ 366 (864)
Q Consensus 312 ~vTl~~l~~~-l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~as 366 (864)
++++.++.+. +++. . | ...++.--+.+||||+|++..
T Consensus 139 Gv~~~~l~~~~l~~~----------G---l-----~~~~~~s~~~~tiGG~va~ng 176 (524)
T 2exr_A 139 GALWEDVLKRCVSEY----------G---L-----APRSWTDYLGLTVGGTLSNAG 176 (524)
T ss_dssp TCBHHHHHHHHHHHH----------S---E-----ECSCCCSCCSSBHHHHHTTCC
T ss_pred CcCHHHHHHHHHHHc----------C---C-----CCCCCCcCCceeecccCCCCC
Confidence 9999998654 3222 0 0 023333346799999999864
No 70
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=92.07 E-value=0.16 Score=58.33 Aligned_cols=70 Identities=13% Similarity=0.094 Sum_probs=49.1
Q ss_pred eEEEEEECCEEEEEecCCCCCcHHHHHhhccCCcc----cccCCCCCC--CCccEEEEeecCCCcccCCcee-ecccccc
Q 002932 12 HSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKS----VKLGCGEGG--CGACVVLLSKYNPELDQLEDFT-ISSCLTL 84 (864)
Q Consensus 12 ~~i~~~lNg~~~~~~~~~~~~~Ll~~LR~~~~l~g----~K~gC~~G~--CGaCtV~~~~~~~~~~~~~~~~-v~sCl~p 84 (864)
.+++|++||+.+++. +.+||++.|+.. |..- .+. =..|. ||+|.|-+ ++.+ +++|.++
T Consensus 14 ~~v~~~~dg~~~~~~---~g~ti~~a~~~~-g~~~~~~~~~~-~p~g~~~~~~c~v~v----------~g~~~~~ac~~~ 78 (493)
T 1y56_A 14 KKVTIYFEGKELEAY---EGEKLPVALLAN-EIYWLTTSNEG-RKRGAFTFGPVPMTV----------NGVKGLEARRIK 78 (493)
T ss_dssp CEEEEEETTEEEEEE---TTCBHHHHHHHT-TCCCCEECTTS-CEECSSSSSCCEEBS----------SSCTTEEGGGCB
T ss_pred CeEEEEECCEEEEec---CCCHHHHHHHHC-CCceecCCCCC-CCCccccceEEEEEE----------CCEecccceeEE
Confidence 469999999998875 699999998754 4321 222 12344 88999988 3443 8899999
Q ss_pred hhhccCceeEEecC
Q 002932 85 LCSVNGCLITTSEG 98 (864)
Q Consensus 85 ~~~~~g~~i~TvEg 98 (864)
+ .+|..+.|-.+
T Consensus 79 v--~~Gm~v~t~~~ 90 (493)
T 1y56_A 79 V--KDGMKIERQGY 90 (493)
T ss_dssp C--CTTCEEBCCCT
T ss_pred c--ccCcEEecccC
Confidence 6 46877776433
No 71
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A*
Probab=90.85 E-value=0.16 Score=53.68 Aligned_cols=141 Identities=15% Similarity=0.126 Sum_probs=86.1
Q ss_pred EEecCCHHHHHHHHhhhcCCCCCcceEEccCccceEeeecccC-ceeeeCCCCccccceEecCCcEEecccccHHHHHHH
Q 002932 243 WHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHY-DKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIEA 321 (864)
Q Consensus 243 ~~~P~tl~eal~ll~~~~~~~~~~a~lvaGgTdl~v~k~~~~~-~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~~~ 321 (864)
+++|+|.+|+.+++. -...++.|||.+.+-.. ... ..+|++++ |+.|+.+ + ++||++++.+|.+.
T Consensus 25 vv~p~s~edv~~~v~-------ipv~v~GgGsnll~~d~-~~~~GvVI~l~~---~~~I~vd-~--~v~aG~~~~~l~~~ 90 (268)
T 2gqt_A 25 LWTVETREELKRATE-------APYRVLGNGSNLLVLDE-GVPERVIRLAGE---FQTYDLK-G--WVGAGTLLPLLVQE 90 (268)
T ss_dssp EEEECSHHHHHHHTT-------SCEEECSSSSSEEECTT-CCSSEEEEECGG---GGCBCTT-S--EEETTSBHHHHHHH
T ss_pred EEEeCCHHHHHHHhC-------CCeEEcCCCcCceecCC-CcCCeEEEEcCC---CCCcEEc-C--EEECCCCHHHHHHH
Confidence 999999999999882 46788999998865322 223 68899864 5666554 3 99999999999998
Q ss_pred HHHHhhhhhhhhhhhHHHHHHHHHHhccccccCCcccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCe-eEEEehhh
Q 002932 322 LKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQK-CEKLMLEE 400 (864)
Q Consensus 322 l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~f~sD~~p~LlaldA~v~l~s~~g-~R~vpl~d 400 (864)
+.+.- +. -+...+... +||||++++.... |-..+.-.+ + .|++. .+| .+++.-+|
T Consensus 91 ~~~~G----------l~----Gle~~~giP----GtvGGav~~NaGa-yG~e~~d~v--~--~v~vv-~~G~v~~~~~~~ 146 (268)
T 2gqt_A 91 AARAG----------LS----GLEGLLGIP----AQVGGAVKMNAGT-RFGEMADAL--E--AVEVF-HDGAFHVYCPEE 146 (268)
T ss_dssp HHHTT----------EE----SCGGGTTCC----CBHHHHHHTTCEE-TTEEGGGGE--E--EEEEE-ETTEEEEECGGG
T ss_pred HHHcC----------Cc----CCccccCcc----chhHHHHHhcccc-CchhHHhhe--e--EEEEE-CCCcEEEEchHH
Confidence 65431 10 111223322 6899998775431 111111111 1 34444 555 56676666
Q ss_pred -hhc-C-CCCC-CCceEEEEEcCCCC
Q 002932 401 -FLE-R-PPLD-SRSILLSVEIPCWD 422 (864)
Q Consensus 401 -F~~-~-~~l~-~~Eii~~I~iP~~~ 422 (864)
+|. + ..+. .+ ||+++.+...+
T Consensus 147 l~~~YR~s~~~~~g-IVt~~~~~L~~ 171 (268)
T 2gqt_A 147 LGFGYRKSHLPPGG-IVTRVRLKLKE 171 (268)
T ss_dssp SCCBTTBCCCSTTC-EEEEEEECCEE
T ss_pred cccccCCCCcCCCc-eEEEEEEEEEe
Confidence 443 2 2232 24 88988876543
No 72
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=90.40 E-value=0.26 Score=58.02 Aligned_cols=48 Identities=29% Similarity=0.621 Sum_probs=39.7
Q ss_pred eEEEEEECCEEEEEecCCCCCcHHHHHhhccCCcccccCCC-CCCCCccEEEEe
Q 002932 12 HSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCG-EGGCGACVVLLS 64 (864)
Q Consensus 12 ~~i~~~lNg~~~~~~~~~~~~~Ll~~LR~~~~l~g~K~gC~-~G~CGaCtV~~~ 64 (864)
..|+|.-+|+.+++ ++++|||+.+++. |+. ...+|+ .|.||.|.|.|.
T Consensus 4 ~~V~~~~sg~~v~v---~~G~tLLeAa~~a-Gi~-ip~~C~G~G~CGtC~v~V~ 52 (631)
T 3zyy_X 4 YKVLFKPDQKEVAI---SENTNLMEALNLA-GIN-IKTVCGGAGTCGKCLVRVV 52 (631)
T ss_dssp EEEEEETTTEEEEE---CTTSCHHHHHHHH-TCC-CCCSCCCSSCCSTTEEEEE
T ss_pred eEEEEecCCeEEEE---CCCCcHHHHHHHc-CCC-CCcCCCCCCcCCCCEEEEe
Confidence 35778878877665 5799999999875 774 889999 999999999884
No 73
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=90.34 E-value=0.42 Score=54.66 Aligned_cols=84 Identities=4% Similarity=0.065 Sum_probs=59.4
Q ss_pred CceEEecCCHHHHHHHHhhhcCCCCCcceEEccCccceEeee-cccCceeeeCCCCccccceEecCCcEEecccccHHHH
Q 002932 240 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKE-VEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKA 318 (864)
Q Consensus 240 ~~~~~~P~tl~eal~ll~~~~~~~~~~a~lvaGgTdl~v~k~-~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l 318 (864)
...+++|+|.+|+.++++.... .+-...+.+||+++.-+.. ......+||++++..+..+..++..+++||++++.+|
T Consensus 37 p~~vv~P~s~~dv~~~v~~a~~-~~~~v~v~ggGh~~~g~~~~~~~~~vvIdl~~~~~i~~vd~~~~~v~v~aG~~~~~l 115 (473)
T 3rja_A 37 PTAIAQTQTTAHIQSAVQCAKK-LNLKVSAKSGGHSYASFGFGGENGHLMVQLDRMIDVISYNDKTGIAHVEPGARLGHL 115 (473)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-TTCCEEEESSCCCTTCGGGTSSSSCEEEECTTCCCEEEEETTTTEEEECTTCBHHHH
T ss_pred CCEEEEeCCHHHHHHHHHHHHH-cCCeEEEEcCCCCCCCCcccCCCCeEEEECCCCCceEEEcCCCCEEEECCCCCHHHH
Confidence 3468999999999888763211 2346888999999752111 1234589999886544444445678999999999999
Q ss_pred HHHHHH
Q 002932 319 IEALKE 324 (864)
Q Consensus 319 ~~~l~~ 324 (864)
.+.+.+
T Consensus 116 ~~~l~~ 121 (473)
T 3rja_A 116 ATVLND 121 (473)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988654
No 74
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=90.32 E-value=0.12 Score=59.99 Aligned_cols=156 Identities=11% Similarity=0.034 Sum_probs=90.4
Q ss_pred ceEEecCCHHHHHHHHhhhcC-CC-CCcceEEccCccceEeeecccCceeeeCCCCcccc---ceEec--CCcEEecccc
Q 002932 241 GSWHSPISVQELRNVLESVEG-SN-QISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELS---VIRRD--QTGIEIGATV 313 (864)
Q Consensus 241 ~~~~~P~tl~eal~ll~~~~~-~~-~~~a~lvaGgTdl~v~k~~~~~~~lIdl~~I~EL~---~I~~~--~~~l~IGA~v 313 (864)
..+++|+|.+|+.++++-... .. +-...+.+|||++.-... .....+||++++..+. .++.+ +..+++||++
T Consensus 70 ~~vv~P~s~~ev~~~v~~a~~~~~~~~~v~~~G~G~~~~g~~~-~~~gvvi~l~~m~~i~~~~~~~~d~~~~~v~v~aGv 148 (534)
T 1w1o_A 70 AAVLYPSSTGDLVALLSAANSTPGWPYTIAFRGRGHSLMGQAF-APGGVVVNMASLGDAAAPPRINVSADGRYVDAGGEQ 148 (534)
T ss_dssp SEEECCSSHHHHHHHHHHHHHCTTCCCCEEEESSCCCSSSTTC-CTTSEEEEGGGGGCSSSSCSEEECTTSSEEEEETTC
T ss_pred CEEEecCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCcC-CCCeEEEECccccccccCccEEEcCCCCEEEECCCc
Confidence 357899999999988763210 01 224677899999742111 1246899998755441 13443 4689999999
Q ss_pred cHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHhccccccCCcccCCccccccCC------CCCCchHHHHHhcCcEEEE
Q 002932 314 TISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRK------HFPSDVATVLLGAGAMVNI 387 (864)
Q Consensus 314 Tl~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~------~f~sD~~p~LlaldA~v~l 387 (864)
++.++.+.+.+. .+ ...++.-...+||||++++.... +..+|.+ + .+++
T Consensus 149 ~~~~l~~~~~~~----------Gl--------~~~~~~~~~~~tvGG~v~~~g~g~~~~~yG~~~d~v-----~--~~ev 203 (534)
T 1w1o_A 149 VWIDVLRASLAR----------GV--------APRSWTDYLYLTVGGTLSNAGISGQAFRHGPQISNV-----L--EMDV 203 (534)
T ss_dssp BHHHHHHHHHTT----------TE--------EESCCCSSCCSBHHHHHTTCCCSTTHHHHCCGGGSE-----E--EEEE
T ss_pred CHHHHHHHHHHC----------CC--------cccCCCCCCCEEeceeccCCCccccccccccHhhhE-----E--EEEE
Confidence 999998876532 00 02233333578999999875432 2122211 2 3445
Q ss_pred EeCCee-EEEeh---hhhhc--CCCCCCCceEEEEEcCCCC
Q 002932 388 MTGQKC-EKLML---EEFLE--RPPLDSRSILLSVEIPCWD 422 (864)
Q Consensus 388 ~s~~g~-R~vpl---~dF~~--~~~l~~~Eii~~I~iP~~~ 422 (864)
...+|+ .+..- .|.|. ......--|||++.+...+
T Consensus 204 V~~dG~v~~~~~~~~~dL~~~~rGs~G~~GIVt~~~l~l~p 244 (534)
T 1w1o_A 204 ITGHGEMVTCSKQLNADLFDAVLGGLGQFGVITRARIAVEP 244 (534)
T ss_dssp EETTSCEEEEESSSSHHHHHHHTTCTTCSEEEEEEEEEEEE
T ss_pred EeCCccEEEECCCCChhhHhhhcCCCCCcEEEEEEEEEEEE
Confidence 556663 33333 34332 2222334588888775543
No 75
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=89.08 E-value=0.62 Score=53.59 Aligned_cols=156 Identities=13% Similarity=0.093 Sum_probs=90.6
Q ss_pred CceEEecCCHHHHHHHHhhhcCCCCCcceEEccCccceEeeec-ccCceeeeCCCCccccceEecCCcEEecccccHHHH
Q 002932 240 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEV-EHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKA 318 (864)
Q Consensus 240 ~~~~~~P~tl~eal~ll~~~~~~~~~~a~lvaGgTdl~v~k~~-~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l 318 (864)
..-+++|+|.+|+.++++-... .+-...+.+||+++.-.... .....+||++++..+ .+..++..+++||++|+.+|
T Consensus 46 P~~vv~P~s~~dV~~~v~~a~~-~~~~v~vrGgGh~~~g~~~~~~~ggvvIdl~~m~~i-~vd~~~~~v~V~aG~~l~~l 123 (495)
T 3fw9_A 46 PSAIILPGSKEELSNTIRCIRK-GSWTIRLRSGGHSYEGLSYTSDTPFILIDLMNLNRV-SIDLESETAWVESGSTLGEL 123 (495)
T ss_dssp CSEEECCCSHHHHHHHHHHHHT-SSCEEEEESSCCCTTCTTSCCSSCEEEEECTTCCCE-EEETTTTEEEEETTCBHHHH
T ss_pred CCEEEecCCHHHHHHHHHHHHH-cCCeEEEECCCcCCCCccccCCCCeEEEECCCCCcE-EEeCCCCEEEEcCCCCHHHH
Confidence 3468999999999988764321 23457888999997321110 123589999885544 34445678999999999999
Q ss_pred HHHHHHHhhhhhhhhhhhHHHHHHHHHHhccccccCCcccCCccccccCC------CCCCchHHHHHhcCcEEEEEeCCe
Q 002932 319 IEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRK------HFPSDVATVLLGAGAMVNIMTGQK 392 (864)
Q Consensus 319 ~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~------~f~sD~~p~LlaldA~v~l~s~~g 392 (864)
.+.+.+.-.. -.+| ..+-...+|||++....-. +...|.+ -.+++...+|
T Consensus 124 ~~~l~~~g~g------l~~~-----------~G~~~~vgigG~~~gGg~G~~~~~~G~~~D~v-------~~~~vV~adG 179 (495)
T 3fw9_A 124 YYAITESSSK------LGFT-----------AGWCPTVGTGGHISGGGFGMMSRKYGLAADNV-------VDAILIDANG 179 (495)
T ss_dssp HHHHHHHCSS------EECC-----------CCSCTTCBHHHHHHTCCCCTTHHHHCCGGGGE-------EEEEEECTTC
T ss_pred HHHHHHhcCC------ceec-----------cCCCCCCeEeeeccCCCCcccccCCCchhheE-------EEEEEEcCCC
Confidence 8876542000 0011 1233466788887665432 1112322 2455556666
Q ss_pred eEEE---ehhhhhc--CC-CCCCCceEEEEEcCCC
Q 002932 393 CEKL---MLEEFLE--RP-PLDSRSILLSVEIPCW 421 (864)
Q Consensus 393 ~R~v---pl~dF~~--~~-~l~~~Eii~~I~iP~~ 421 (864)
+..- .=.|+|- +. ....--||+++.+...
T Consensus 180 ~i~~~~~~~~DLf~a~rGg~~g~~GIVt~~~l~l~ 214 (495)
T 3fw9_A 180 AILDRQAMGEDVFWAIRGGGGGVWGAIYAWKIKLL 214 (495)
T ss_dssp CEECHHHHCHHHHHHHTTSCTTSSCEEEEEEEECE
T ss_pred CEEEcCCCChhhhhhhhcccCCCcEEEEEEEEEEE
Confidence 4322 1125442 22 3333459999887554
No 76
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=88.41 E-value=0.51 Score=53.66 Aligned_cols=82 Identities=12% Similarity=0.161 Sum_probs=57.8
Q ss_pred CceEEecCCHHHHHHHHhhhcCCCCCcceEEccCccceEeeecccCceeeeCCCCccccceEecCCcEEecccccHHHHH
Q 002932 240 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAI 319 (864)
Q Consensus 240 ~~~~~~P~tl~eal~ll~~~~~~~~~~a~lvaGgTdl~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~ 319 (864)
...+++|+|.+|+.++++.... .+-...+.+||+++.-... .....+||++++..+ .+..++..+++||++++.+|.
T Consensus 39 p~~vv~p~s~~dv~~~v~~a~~-~~~~~~v~ggGh~~~~~~~-~~~gvvi~l~~l~~i-~~d~~~~~v~v~aG~~~~~l~ 115 (459)
T 2bvf_A 39 PSLIARCLSAGDVAKSVRYACD-NGLEISVRSGGHNPNGYAT-NDGGIVLDLRLMNSI-HIDTAGSRARIGGGVISGDLV 115 (459)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-HTCCEEEESSCCCTTCTTC-CSSSEEEECTTCCCE-EEETTTTEEEEETTCBHHHHH
T ss_pred CCEEEecCCHHHHHHHHHHHHH-cCCcEEEEcCCcCCCCccc-cCCeEEEECCCCCCE-EECCCCCEEEECCCCCHHHHH
Confidence 3467899999999887763211 1346788999999753211 235689999875544 233346689999999999999
Q ss_pred HHHHH
Q 002932 320 EALKE 324 (864)
Q Consensus 320 ~~l~~ 324 (864)
+.+.+
T Consensus 116 ~~l~~ 120 (459)
T 2bvf_A 116 KEAAK 120 (459)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 98654
No 77
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=88.40 E-value=0.66 Score=53.84 Aligned_cols=82 Identities=12% Similarity=0.126 Sum_probs=56.9
Q ss_pred CceEEecCCHHHHHHHHhhhcCCCCCcceEEccCccceEeeecccCceeeeCCCCccccceEecCCcEEecccccHHHHH
Q 002932 240 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAI 319 (864)
Q Consensus 240 ~~~~~~P~tl~eal~ll~~~~~~~~~~a~lvaGgTdl~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~ 319 (864)
....++|+|.+|+.++++-... ..-...+.+||+++...........+||++++..+ .+..++..++|||++++.+|.
T Consensus 59 p~~vv~p~s~~dv~~~v~~a~~-~~~~v~v~ggGh~~~g~~~~~~~gvvIdl~~l~~i-~~d~~~~~v~v~aG~~~~~l~ 136 (530)
T 2y3s_A 59 PEEIHLVGSAAEIEQVLSRAVR-SGKRVAVRSGGHCYEDFVANSDVRVVMDMSRLSAV-GFDEERGAFAVEAGATLGAVY 136 (530)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-TTCCEEEESSCCCSSSTTTCTTCCEEEECTTCCCE-EEETTTTEEEEETTCBHHHHH
T ss_pred CCEEEecCCHHHHHHHHHHHHH-cCCcEEEECCCCCCCCCcccCCCeEEEEcccCCCE-EEcCCCCEEEEeCCCCHHHHH
Confidence 3467899999998887753211 23468889999987442211234689999875443 333344689999999999999
Q ss_pred HHHH
Q 002932 320 EALK 323 (864)
Q Consensus 320 ~~l~ 323 (864)
+.+.
T Consensus 137 ~~l~ 140 (530)
T 2y3s_A 137 KTLF 140 (530)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8764
No 78
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=87.68 E-value=0.75 Score=53.28 Aligned_cols=82 Identities=16% Similarity=0.152 Sum_probs=57.0
Q ss_pred CceEEecCCHHHHHHHHhhhcCCCCCcceEEccCccceEeeecccCceeeeCCCCccccceEecCCcEEecccccHHHHH
Q 002932 240 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAI 319 (864)
Q Consensus 240 ~~~~~~P~tl~eal~ll~~~~~~~~~~a~lvaGgTdl~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~ 319 (864)
..-+++|+|.+|+.++++-... .+-...+.+||+++...........+||++++..+ .+..++..++|||++++.+|.
T Consensus 58 p~~vv~p~s~~dv~~~v~~a~~-~~~~~~v~ggGh~~~g~~~~~~~gvvIdl~~m~~i-~~d~~~~~v~v~aG~~~~~l~ 135 (523)
T 2wdx_A 58 PDYIHLVGSTQQVADAVEETVR-TGKRVAVRSGGHCFEDFVDNPDVKVIIDMSLLTEI-AYDPSMNAFLIEPGNTLSEVY 135 (523)
T ss_dssp CSEEEECSSHHHHHHHHHHHHH-HTCCEEEESSCCCSSSSSSSTTCCEEEECTTCCCE-EEETTTTEEEECTTCBHHHHH
T ss_pred CCEEEEeCCHHHHHHHHHHHHH-cCCcEEEEcCCCCCCCCccCCCCeEEEEcccCCCE-EEcCCCCEEEEcCCCCHHHHH
Confidence 3568999999998887753211 13467888999987542211234689999875443 333346689999999999999
Q ss_pred HHHH
Q 002932 320 EALK 323 (864)
Q Consensus 320 ~~l~ 323 (864)
+.+.
T Consensus 136 ~~l~ 139 (523)
T 2wdx_A 136 EKLY 139 (523)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8865
No 79
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=87.26 E-value=0.77 Score=53.12 Aligned_cols=80 Identities=9% Similarity=0.090 Sum_probs=56.6
Q ss_pred CceEEecCCHHHHHHHHhhhcCCCCCcceEEccCccceEeeecccCceeeeCCCCccccceEec--CCcEEecccccHHH
Q 002932 240 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRD--QTGIEIGATVTISK 317 (864)
Q Consensus 240 ~~~~~~P~tl~eal~ll~~~~~~~~~~a~lvaGgTdl~v~k~~~~~~~lIdl~~I~EL~~I~~~--~~~l~IGA~vTl~~ 317 (864)
..-.++|+|.+|+.++++-... ..-...+.+||+++...........+||++++ +.|+.+ +..++|||++++.+
T Consensus 56 p~~vv~p~s~~dv~~~v~~a~~-~~~~~~vrggGh~~~g~~~~~~~gvvIdl~~l---~~i~~d~~~~~v~v~aG~~~~~ 131 (521)
T 2ipi_A 56 PDVVYVVHTADQVVDAVNQAMA-AGQRIAVRSGGHCFEGFVDDPAVRAVIDMSQM---RQVFYDSGKRAFAVEPGATLGE 131 (521)
T ss_dssp CSEEEECSSHHHHHHHHHHHHH-HTCCEEEESSCCCTTCGGGCTTCCEEEECTTC---CCEEEETTTTEEEECTTSBHHH
T ss_pred CCEEEEcCCHHHHHHHHHHHHH-cCCeEEEECCCcCCCCCcccCCCeEEEecccC---CCeEEeCCCCEEEEeCCcCHHH
Confidence 3467899999998887753211 13467889999987542211234689999875 555444 66899999999999
Q ss_pred HHHHHH
Q 002932 318 AIEALK 323 (864)
Q Consensus 318 l~~~l~ 323 (864)
|.+.+.
T Consensus 132 l~~~l~ 137 (521)
T 2ipi_A 132 TYRALY 137 (521)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998764
No 80
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=87.08 E-value=0.7 Score=53.44 Aligned_cols=83 Identities=10% Similarity=0.038 Sum_probs=57.6
Q ss_pred CceEEecCCHHHHHHHHhhhcCCCCCcceEEccCccceEeee-cccCceeeeCCCCccccceEecCCcEEecccccHHHH
Q 002932 240 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKE-VEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKA 318 (864)
Q Consensus 240 ~~~~~~P~tl~eal~ll~~~~~~~~~~a~lvaGgTdl~v~k~-~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l 318 (864)
..-+++|+|.+|+.++++-... .+-...+.+||+++..... ......+||++++..+ .|..++..+++||++++.+|
T Consensus 54 P~~vv~P~s~~dV~~~v~~a~~-~~~~v~vrggGh~~~g~~~~~~~~gvvIdl~~l~~i-~vd~~~~~v~V~aG~~l~~l 131 (518)
T 3vte_A 54 PLVIVTPSNNSHIQATILCSKK-VGLQIRTRSGGHDAEGMSYISQVPFVVVDLRNMHSI-KIDVHSQTAWVEAGATLGEV 131 (518)
T ss_dssp CSEEECCCSHHHHHHHHHHHHH-HTCEEEEESSCCCTTCTTTCCSSSEEEEECTTCCCE-EEETTTTEEEEETTCBHHHH
T ss_pred CCEEEEeCCHHHHHHHHHHHHH-cCCcEEEECCCcCCCCCccCCCCCeEEEECCCCcee-EEeCCCCEEEEeCCccHHHH
Confidence 3568999999999887763211 1345788899999743221 0124689999875444 24445678999999999999
Q ss_pred HHHHHH
Q 002932 319 IEALKE 324 (864)
Q Consensus 319 ~~~l~~ 324 (864)
.+.+.+
T Consensus 132 ~~~l~~ 137 (518)
T 3vte_A 132 YYWINE 137 (518)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887654
No 81
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=86.95 E-value=0.77 Score=52.88 Aligned_cols=80 Identities=11% Similarity=0.124 Sum_probs=56.4
Q ss_pred ceEEecCCHHHHHHHHhhhcCCCCCcceEEccCccceEeeec-ccCceeeeCCCCccccceEecCCcEEecccccHHHHH
Q 002932 241 GSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEV-EHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAI 319 (864)
Q Consensus 241 ~~~~~P~tl~eal~ll~~~~~~~~~~a~lvaGgTdl~v~k~~-~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~ 319 (864)
..+++|+|.+|+.++++-... .+-...+.+||+++...... .....+||++++..+ .+. ++..+++||++++.+|.
T Consensus 44 ~~vv~p~s~~dv~~~v~~a~~-~~~~~~v~ggGh~~~~~~~~~~~~gvvIdl~~l~~i-~~d-~~~~v~v~aG~~~~~l~ 120 (503)
T 1zr6_A 44 AAIAIPRSTEDIAAAVQCGLD-AGVQISAKGGGHSYGSYGFGGEDGHLMLELDRMYRV-SVD-DNNVATIQGGARLGYTA 120 (503)
T ss_dssp SEEEECCSHHHHHHHHHHHHH-HTCCEEEESSCCCTTCTTTTSSSSCEEEECTTCCCE-EEC-TTSCEEEETTCBHHHHH
T ss_pred CEEEEeCCHHHHHHHHHHHHH-cCCeEEEECCCcCCCCCcccCCCCcEEEECccCCCE-EEC-CCCeEEEecCCCHHHHH
Confidence 457899999999887753211 13467889999998542211 233689999875444 333 46689999999999999
Q ss_pred HHHH
Q 002932 320 EALK 323 (864)
Q Consensus 320 ~~l~ 323 (864)
+.+.
T Consensus 121 ~~l~ 124 (503)
T 1zr6_A 121 LELL 124 (503)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8864
No 82
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=86.94 E-value=0.84 Score=52.57 Aligned_cols=82 Identities=13% Similarity=0.192 Sum_probs=57.0
Q ss_pred CceEEecCCHHHHHHHHhhhcCCCCCcceEEccCccceEeeecccCceeeeCCCCccccceEecCCcEEecccccHHHHH
Q 002932 240 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAI 319 (864)
Q Consensus 240 ~~~~~~P~tl~eal~ll~~~~~~~~~~a~lvaGgTdl~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~ 319 (864)
....++|+|.+|+.++++-... .+-...+.+||+++.-.-.......+||++++..+ .+..++..++|||++++.+|.
T Consensus 35 P~~vv~P~s~~dV~~~v~~a~~-~~~~v~vrggGh~~~g~~~~~~~gvvIdl~~l~~i-~vd~~~~~v~v~aG~~~~~l~ 112 (501)
T 3pop_A 35 PEEFFLPATPDDVVASLQKAVT-EGRGVACRSGGHCGQDFVGTPRRDLVLDLHNLHAI-GPAADGAGVRVGSGATVDQVQ 112 (501)
T ss_dssp CSEEEECSSHHHHHHHHHHHHH-TTCCEEEESSCCCSSSTTTSSCCSEEEECTTCCCE-EECTTSSSEEEETTCBHHHHH
T ss_pred CCEEEEeCCHHHHHHHHHHHHH-cCCeEEEEeCCccCCCccccCCCEEEEEecccCCe-EEcCCCCEEEEECCcCHHHHH
Confidence 3468899999999887763211 23467888999987532111224689999885443 233345689999999999999
Q ss_pred HHHH
Q 002932 320 EALK 323 (864)
Q Consensus 320 ~~l~ 323 (864)
+.+.
T Consensus 113 ~~l~ 116 (501)
T 3pop_A 113 KALF 116 (501)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8764
No 83
>3hrd_B Nicotinate dehydrogenase medium molybdopterin subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=83.78 E-value=1.8 Score=47.03 Aligned_cols=60 Identities=13% Similarity=0.063 Sum_probs=46.2
Q ss_pred CCCCeEEEEECCCCcEEEEeCCC----ChH-HHHHHHHHHhCCCCCCEEEEe------CCcCCCCCCCCCC
Q 002932 786 METQTALAVPDEDNCLVVYSSIQ----CPE-SAHATIARCLGIPEHNVRVIT------RRVGGAFGGKAIK 845 (864)
Q Consensus 786 mEp~~a~A~~~~dg~l~V~~stQ----~p~-~~r~~vA~~Lglp~~kV~V~~------~~~GGgFGgK~~~ 845 (864)
..+.++....+.||.++|+++.+ ..+ .+...+|+.||+|.++|+|.. ++.+|.+|++.+.
T Consensus 21 ~~~~~a~v~i~~DG~V~v~~g~~emGQG~~T~laQIaAe~Lgi~~e~V~v~~~DT~~~p~~~~T~gSrst~ 91 (330)
T 3hrd_B 21 PNPAAAFVEIHGDGSANVMFGAADIGQGSGTAMAQIAAEELGLDYEKIHVTWGDTMVTPDGGATSASRQTL 91 (330)
T ss_dssp CCCEEEEEEECTTSCEEEEECCCCSSSCHHHHHHHHHHHHHTCCGGGEEEEESBTTTSCCCCCSCTTCHHH
T ss_pred CCcceEEEEEeCCCeEEEEECCCCCCCCHHHHHHHHHHHHhCCCHHHEEEEecCCCCCCCCCCCcchHhHH
Confidence 45677888888889999999864 444 345677999999999999985 4557778877653
No 84
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=82.65 E-value=3.3 Score=51.53 Aligned_cols=83 Identities=16% Similarity=0.177 Sum_probs=59.1
Q ss_pred eeEEEEEECCEEEEEecCCCCCcHHHHHhhccCCc----ccccC------CCCCCCCccEEEEeecCCCcccCCceeecc
Q 002932 11 RHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFK----SVKLG------CGEGGCGACVVLLSKYNPELDQLEDFTISS 80 (864)
Q Consensus 11 ~~~i~~~lNg~~~~~~~~~~~~~Ll~~LR~~~~l~----g~K~g------C~~G~CGaCtV~~~~~~~~~~~~~~~~v~s 80 (864)
..+|+|++||+.++.. +..||...|... |.. ++|.+ |+-|.|..|.|-+.+.. .+......+.+
T Consensus 20 ~~~~~~~~dG~~~~~~---~g~tv~~aL~~~-Gv~~~~~s~~~~~prg~~~~~~~c~~~~v~v~~~~--~g~~~~~~~~a 93 (965)
T 2gag_A 20 EEALSLTVDGAKLSAF---RGDTVASALLAN-GVRRAGNSLYLDRPRGIFAAGVEEPNALVTVSARH--EQDIDESMLPA 93 (965)
T ss_dssp EEEEEEEETTEEEEEE---ETCBHHHHHHHT-TCCBCSCCTTTCCCCBCCCSSTTCCSCEEEECCCS--TTCCCEEEEEG
T ss_pred CCeEEEEECCEEEEec---CCCHHHHHHHHc-CCeEeecCCCCCCCcccccCCccCCceEEEEccCC--CCCcCCccccc
Confidence 3579999999999875 588999999654 433 22333 77799999999994100 11112456789
Q ss_pred cccchhhccCceeEEecCCCC
Q 002932 81 CLTLLCSVNGCLITTSEGLGN 101 (864)
Q Consensus 81 Cl~p~~~~~g~~i~TvEgl~~ 101 (864)
|.+++ .+|..|.|..|++.
T Consensus 94 c~~~~--~~gm~~~~~~glg~ 112 (965)
T 2gag_A 94 TTVPV--TEDLNATLLSGLGV 112 (965)
T ss_dssp GGCBC--CTTEEEEECSSCBC
T ss_pred eeeec--ccceEeecccCCCC
Confidence 98886 58999999888874
No 85
>3nvz_C Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3ns1_C* 3etr_C* 3nvv_C* 3nvw_C* 3nrz_C* 3nvy_C* 3eub_C* 3b9j_C* 1fiq_C* 3rca_C* 3sr6_C*
Probab=81.14 E-value=0.85 Score=55.18 Aligned_cols=74 Identities=9% Similarity=0.030 Sum_probs=52.3
Q ss_pred CCCCeEEEEECCCCcEEEEeCCC----ChHH-HHHHHHHHhCCCCCCEEEEe------CCcCCCCCCCCCCChHHHHHHH
Q 002932 786 METQTALAVPDEDNCLVVYSSIQ----CPES-AHATIARCLGIPEHNVRVIT------RRVGGAFGGKAIKAMPFNIVGA 854 (864)
Q Consensus 786 mEp~~a~A~~~~dg~l~V~~stQ----~p~~-~r~~vA~~Lglp~~kV~V~~------~~~GGgFGgK~~~~~~~~~~aA 854 (864)
+.+.++.+....||.++|+++++ ..+- +...+|+.||||.++|+|.. +..+|.+|++.+. ....++.
T Consensus 444 ~~~~~a~v~l~~DG~v~v~~g~~e~GQG~~T~~aQiaAe~Lgi~~e~V~v~~~DT~~~p~~~~t~aSr~t~--~~G~Av~ 521 (755)
T 3nvz_C 444 LNQAGALIHVYTDGSVLVSHGGTEMGQGLHTKMVQVASKALKIPISKIYISETSTNTVPNSSPTAASVSTD--IYGQAVY 521 (755)
T ss_dssp GCEEEEEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTSCGGGEECCCEETTTSCSCCCSCTTCHHH--HHHHHHH
T ss_pred CCcceEEEEEecCCeEEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHEEEECCCCCCCCCCCCCchhHHHH--HHHHHHH
Confidence 45677888888889999999975 4443 45667899999999999964 3457888888753 2333444
Q ss_pred HHHHHcC
Q 002932 855 TIELLTV 861 (864)
Q Consensus 855 laA~~t~ 861 (864)
.||.++.
T Consensus 522 ~Aa~~l~ 528 (755)
T 3nvz_C 522 EACQTIL 528 (755)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4555543
No 86
>1rm6_A 4-hydroxybenzoyl-COA reductase alpha subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.41.1.1 d.133.1.1 PDB: 1sb3_A*
Probab=80.27 E-value=2.1 Score=51.84 Aligned_cols=73 Identities=15% Similarity=0.120 Sum_probs=52.7
Q ss_pred CCCCeEEEEECCCCcEEEEeCCCCh----H-HHHHHHHHHhCCCCCCEEEEe------CCcCCCCCCCCCCChHHHHHHH
Q 002932 786 METQTALAVPDEDNCLVVYSSIQCP----E-SAHATIARCLGIPEHNVRVIT------RRVGGAFGGKAIKAMPFNIVGA 854 (864)
Q Consensus 786 mEp~~a~A~~~~dg~l~V~~stQ~p----~-~~r~~vA~~Lglp~~kV~V~~------~~~GGgFGgK~~~~~~~~~~aA 854 (864)
+...++.+....||.++|+++++.. + .+...+|+.||+|.++|+|.. +..+|.+|++.+. ....++-
T Consensus 457 ~~~~~a~v~l~~dG~v~v~~g~~e~GqG~~T~~aQiaAe~Lgip~e~V~v~~~DT~~~p~~~~t~aSr~t~--~~G~Av~ 534 (769)
T 1rm6_A 457 EPHATVNLKLDFDGGITLLTGAADIGQGSNTMASQVAAEVLGVRLSRIRVISADSALTPKDNGSYSSRVTF--MVGNASI 534 (769)
T ss_dssp CCSEEEEEEECTTCCEEEEECCCCSSSCHHHHHHHHHHHHHTCCGGGEEEEESBTTTSCCCCCSCTTCHHH--HHHHHHH
T ss_pred CCCccEEEEEeCCCeEEEEECCccCCCCHHHHHHHHHHHHhCCCHHHEEEecCCCCCCCCCCCCccchHHH--HHHHHHH
Confidence 3567788888889999999988544 3 456778999999999999985 4567788877653 2333344
Q ss_pred HHHHHc
Q 002932 855 TIELLT 860 (864)
Q Consensus 855 laA~~t 860 (864)
.||.++
T Consensus 535 ~Aa~~l 540 (769)
T 1rm6_A 535 SAAEEL 540 (769)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 455544
No 87
>1n62_B Carbon monoxide dehydrogenase large chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.41.1.1 d.133.1.1 PDB: 1n5w_B* 1n61_B* 1n60_B* 1n63_B* 1zxi_B*
Probab=78.44 E-value=3.5 Score=50.22 Aligned_cols=72 Identities=15% Similarity=0.151 Sum_probs=53.2
Q ss_pred CCeEEEEECCCCcEEEEeCCCCh----H-HHHHHHHHHhCCCCCCEEEEe------CCcCCCCCCCCCCChHHHHHHHHH
Q 002932 788 TQTALAVPDEDNCLVVYSSIQCP----E-SAHATIARCLGIPEHNVRVIT------RRVGGAFGGKAIKAMPFNIVGATI 856 (864)
Q Consensus 788 p~~a~A~~~~dg~l~V~~stQ~p----~-~~r~~vA~~Lglp~~kV~V~~------~~~GGgFGgK~~~~~~~~~~aAla 856 (864)
..++.+....||.++|+++++.. + .+...+|+.||||.++|+|.. +..+|.+|++.+.. ...++-.|
T Consensus 506 ~~~a~v~l~~DG~v~v~~g~~e~GqG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~~t~aSr~t~~--~G~Av~~A 583 (809)
T 1n62_B 506 FDSAEIRIHPTGSVIARMGTKSQGQGHETTYAQIIATELGIPADDIMIEEGNTDTAPYGLGTYGSRSTPT--AGAATAVA 583 (809)
T ss_dssp CEEEEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTCCGGGEEEECCBTTTSCCCCCSCTTCTTTT--HHHHHHHH
T ss_pred cccEEEEEecCCeEEEEECCCCCCCCHHHHHHHHHHHHhCCCHHHEEEecCCCCCCCCCCCcccchHHHH--HHHHHHHH
Confidence 35678888889999999988554 3 355778999999999999985 45688899988753 33344455
Q ss_pred HHHcC
Q 002932 857 ELLTV 861 (864)
Q Consensus 857 A~~t~ 861 (864)
|.++.
T Consensus 584 a~~l~ 588 (809)
T 1n62_B 584 ARKIK 588 (809)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65543
No 88
>2w3s_B Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 1jrp_B* 2w3r_B* 1jro_B* 2w54_B* 2w55_B*
Probab=76.88 E-value=2.6 Score=51.20 Aligned_cols=72 Identities=13% Similarity=0.017 Sum_probs=51.3
Q ss_pred CCCeEEEEECCCCcEEEEeCCCCh----H-HHHHHHHHHhCCCCCCEEEEe------CCcCCCCCCCCCCChHHHHHHHH
Q 002932 787 ETQTALAVPDEDNCLVVYSSIQCP----E-SAHATIARCLGIPEHNVRVIT------RRVGGAFGGKAIKAMPFNIVGAT 855 (864)
Q Consensus 787 Ep~~a~A~~~~dg~l~V~~stQ~p----~-~~r~~vA~~Lglp~~kV~V~~------~~~GGgFGgK~~~~~~~~~~aAl 855 (864)
...++.+....||.++|+++++.. + .+...+|+.||||.++|+|.. +..+|.+|++.+. ....++-.
T Consensus 465 ~~~~a~v~l~~DG~v~v~~g~~e~GqG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~~t~aSr~t~--~~G~Av~~ 542 (777)
T 2w3s_B 465 NQAGALVQIYTDGSVALNHGGTEMGQGLHAKMVQVAAAVLGIDPVQVRITATDTSKVPNTSATAASSGAD--MNGMAVKD 542 (777)
T ss_dssp CEEEEEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTSCGGGEEECCEETTTSCSCCCSCTTCHHH--HHHHHHHH
T ss_pred CCCceEEEEccCCeEEEEECCccCCCChhHHHHHHHHHHHCCCHHHEEEEcCCCCCCCCCCCCccchHHH--HHHHHHHH
Confidence 346678888888999999987543 3 355777999999999999974 5668888888753 23333434
Q ss_pred HHHHc
Q 002932 856 IELLT 860 (864)
Q Consensus 856 aA~~t 860 (864)
||.++
T Consensus 543 Aa~~l 547 (777)
T 2w3s_B 543 ACETL 547 (777)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55544
No 89
>1ffv_B CUTL, molybdoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.41.1.1 d.133.1.1 PDB: 1ffu_B*
Probab=76.42 E-value=3.2 Score=50.58 Aligned_cols=71 Identities=14% Similarity=0.074 Sum_probs=51.4
Q ss_pred CCeEEEEECCCCcEEEEeCCCCh----H-HHHHHHHHHhCCCCCCEEEEe------CCcCCCCCCCCCCChHHHHHHHHH
Q 002932 788 TQTALAVPDEDNCLVVYSSIQCP----E-SAHATIARCLGIPEHNVRVIT------RRVGGAFGGKAIKAMPFNIVGATI 856 (864)
Q Consensus 788 p~~a~A~~~~dg~l~V~~stQ~p----~-~~r~~vA~~Lglp~~kV~V~~------~~~GGgFGgK~~~~~~~~~~aAla 856 (864)
..++.+....||.++|+++++.. + .+...+|+.||+|.++|+|.. +..+|.+|++.+. ....++-.|
T Consensus 500 ~~~a~v~l~~dG~v~v~~g~~e~GqG~~T~~aQiaAe~LGi~~e~V~v~~~DT~~~p~~~~t~aSr~t~--~~G~Av~~A 577 (803)
T 1ffv_B 500 FDSCEIRIHPTGSAIARMGTITQGQGHQTTYAQIIATELGIPSEVIQVEEGDTSTAPYGLGTYGSRSTP--VAGAAIALA 577 (803)
T ss_dssp CEEEEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTCCGGGEEEECCBTTTSCCCCCSCTTCHHH--HHHHHHHHH
T ss_pred cccEEEEEecCCeEEEEECCcCCCCCHHHHHHHHHHHHHCCCHHHEEEecCCCCCCCCCCCcccchHHH--HHHHHHHHH
Confidence 36678888889999999988544 3 356778999999999999985 4557788887653 233344445
Q ss_pred HHHc
Q 002932 857 ELLT 860 (864)
Q Consensus 857 A~~t 860 (864)
|.++
T Consensus 578 a~~l 581 (803)
T 1ffv_B 578 ARKI 581 (803)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5554
No 90
>1t3q_B Quinoline 2-oxidoreductase large subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.41.1.1 d.133.1.1
Probab=75.70 E-value=3.3 Score=50.28 Aligned_cols=72 Identities=17% Similarity=0.123 Sum_probs=51.3
Q ss_pred CCeEEEEECCCCcEEEEeCCCCh----H-HHHHHHHHHhCCCCCCEEEEe-----CCcCCCCCCCCCCChHHHHHHHHHH
Q 002932 788 TQTALAVPDEDNCLVVYSSIQCP----E-SAHATIARCLGIPEHNVRVIT-----RRVGGAFGGKAIKAMPFNIVGATIE 857 (864)
Q Consensus 788 p~~a~A~~~~dg~l~V~~stQ~p----~-~~r~~vA~~Lglp~~kV~V~~-----~~~GGgFGgK~~~~~~~~~~aAlaA 857 (864)
..++.+....||.++|+++++.. + .+...+|+.||+|.++|+|.. +..+|.+|++.+. ....++-.||
T Consensus 484 ~~~a~v~l~~dG~v~v~~g~~e~GqG~~T~~aQiaAe~LGip~~~V~v~~~DT~~p~~~~t~aSr~t~--~~G~Av~~Aa 561 (788)
T 1t3q_B 484 HDSATVRIDPTGKVTVTTSLASSGQGHETTLAQIAADVLGVPASDVVIQAGSTKNTYGFGAYASRGAV--IGAGSIGRAA 561 (788)
T ss_dssp CBEEEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTSCGGGEEEECSBTTSCCBCCSCTTCHHH--HHHHHHHHHH
T ss_pred cccEEEEEecCCeEEEEECCcCCCCCHHHHHHHHHHHHHCCCHHHEEEecCCCCCCCCCCCccchHHH--HHHHHHHHHH
Confidence 36678888888999999987544 3 355778999999999999996 4567777777642 2333444455
Q ss_pred HHcC
Q 002932 858 LLTV 861 (864)
Q Consensus 858 ~~t~ 861 (864)
.+++
T Consensus 562 ~~l~ 565 (788)
T 1t3q_B 562 SIVR 565 (788)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 91
>1dgj_A Aldehyde oxidoreductase; beta half-barrel, four-helix bundle, beta barrel; HET: MCN; 2.80A {Desulfovibrio desulfuricans} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1
Probab=73.61 E-value=5.4 Score=49.22 Aligned_cols=74 Identities=16% Similarity=0.157 Sum_probs=54.7
Q ss_pred CCCCeEEEEECCCCcEEEEeCCCCh----H-HHHHHHHHHh---CCCCCCEEEEe------CCcCCCCCCCCCCChHHHH
Q 002932 786 METQTALAVPDEDNCLVVYSSIQCP----E-SAHATIARCL---GIPEHNVRVIT------RRVGGAFGGKAIKAMPFNI 851 (864)
Q Consensus 786 mEp~~a~A~~~~dg~l~V~~stQ~p----~-~~r~~vA~~L---glp~~kV~V~~------~~~GGgFGgK~~~~~~~~~ 851 (864)
+...++.+..+.||.++|+++++.. + .+...+|+.| |+|.++|+|.. +..+|.+|++.+. ....
T Consensus 631 ~~~~~a~v~l~~DG~v~v~~g~~e~GqG~~T~~aQiaAe~L~~~Gip~~~V~v~~~DT~~~p~~~~t~gSr~t~--~~G~ 708 (907)
T 1dgj_A 631 PDTSEAWVELNDDGSVTLGNSWEDHGQGADAGSLGTAHEALRPLGITPENIHLVMNDTSKTPNSGPAGGSRSQV--VTGN 708 (907)
T ss_dssp SCEEEEEEEECTTSCEEEEECCCCSSSCHHHHHHHHHHHHTGGGTCCGGGEEEEESBTTTSCCCCCSCTTCTTT--HHHH
T ss_pred CCCccEEEEEeCCCeEEEEECCcCCCccHHHHHHHHHHHHHhhcCCCHHHEEEecCCCCCCCCCCCCccchHHH--HHHH
Confidence 3556788888889999999988554 3 3567789999 99999999985 5567888888864 3344
Q ss_pred HHHHHHHHcC
Q 002932 852 VGATIELLTV 861 (864)
Q Consensus 852 ~aAlaA~~t~ 861 (864)
++-.||.++.
T Consensus 709 Av~~Aa~~l~ 718 (907)
T 1dgj_A 709 AIRVACEMLI 718 (907)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4445665543
No 92
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=68.48 E-value=7.7 Score=44.39 Aligned_cols=82 Identities=7% Similarity=0.136 Sum_probs=54.1
Q ss_pred ceEEecCCHHHHHHHHhhhcCCCCCcceEEccCccce-E-eeec-ccCceeeeCCCCccccceEecCCcEEecccccHHH
Q 002932 241 GSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMG-Y-YKEV-EHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISK 317 (864)
Q Consensus 241 ~~~~~P~tl~eal~ll~~~~~~~~~~a~lvaGgTdl~-v-~k~~-~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~ 317 (864)
.-.++|+|.+|..++++-... .+-...+-+||++.. . .... .....+||++++..+ .+..+...++||+++++.+
T Consensus 54 ~~vv~p~~~~~v~~~v~~a~~-~~~~~~~r~gGh~~~g~s~~~~~~~~~~~idl~~~~~v-~~d~~~~~~~v~~G~~~~~ 131 (500)
T 3tsh_A 54 LYIITPTQVSHIQSAVVCGRR-HSVRIRVRSGGHDYEGLSYRSLQPETFAVVDLNKMRAV-WVDGKARTAWVDSGAQLGE 131 (500)
T ss_dssp SEEECCSSHHHHHHHHHHHHH-TTCEEEEESSCCCTTCTTTCCSSSCCEEEEECTTCCCE-EEETTTTEEEEETTSBHHH
T ss_pred eEEEEcCCHHHHHHHHHHHHH-CCCcEEEEcCCcCCCCCcCCCCCcCCeEEEECcCCCCE-EECCCCCEEEEccCcCHHH
Confidence 357899999998887652210 123456668888752 2 1111 234578999986543 3444567899999999999
Q ss_pred HHHHHHH
Q 002932 318 AIEALKE 324 (864)
Q Consensus 318 l~~~l~~ 324 (864)
+.+.+.+
T Consensus 132 ~~~~l~~ 138 (500)
T 3tsh_A 132 LYYAIYK 138 (500)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9887654
No 93
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=66.84 E-value=3.7 Score=52.73 Aligned_cols=73 Identities=10% Similarity=0.022 Sum_probs=51.4
Q ss_pred CCCCeEEEEECCCCcEEEEeCCC----ChHH-HHHHHHHHhCCCCCCEEEEe------CCcCCCCCCCCCCChHHHHHHH
Q 002932 786 METQTALAVPDEDNCLVVYSSIQ----CPES-AHATIARCLGIPEHNVRVIT------RRVGGAFGGKAIKAMPFNIVGA 854 (864)
Q Consensus 786 mEp~~a~A~~~~dg~l~V~~stQ----~p~~-~r~~vA~~Lglp~~kV~V~~------~~~GGgFGgK~~~~~~~~~~aA 854 (864)
+.+.++.+....||.++|+++++ ..+- +...+|+.||+|.++|+|.. +..+|.+|++.+. ....++.
T Consensus 1014 ~~~~~a~v~l~~DGsv~v~~g~~e~GQG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~P~~~~t~aSr~t~--~~G~Av~ 1091 (1332)
T 3unc_A 1014 LNQAGALIHVYTDGSVLVSHGGTEMGQGLHTKMVQVASKALKIPISKIYISETSTNTVPNSSPTAASVSTD--IYGQAVY 1091 (1332)
T ss_dssp GCEEEEEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTSCGGGEECCCEETTTSCSCCCSCTTCHHH--HHHHHHH
T ss_pred CCcceEEEEEcCCCeEEEEECCcCCCCCHHHHHHHHHHHHhCCCHHHEEEEcCCCCCCCCCCCccHHHHHH--HHHHHHH
Confidence 45677888888889999999974 4444 44566899999999999974 3457888887653 2333344
Q ss_pred HHHHHc
Q 002932 855 TIELLT 860 (864)
Q Consensus 855 laA~~t 860 (864)
.||.++
T Consensus 1092 ~A~~~l 1097 (1332)
T 3unc_A 1092 EACQTI 1097 (1332)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 455544
No 94
>1vlb_A Aldehyde oxidoreductase; iron-sulphur cluster; HET: PCD; 1.28A {Desulfovibrio gigas} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1 PDB: 1sij_A* 1zcs_A* 3fah_A* 3fc4_A* 3l4p_A*
Probab=65.30 E-value=5.7 Score=49.03 Aligned_cols=74 Identities=12% Similarity=0.067 Sum_probs=53.1
Q ss_pred CCCCeEEEEECCCCcEEEEeCCCCh----H-HHHHHHHHHh---CCCCCCEEEEe------CCcCCCCCCCCCCChHHHH
Q 002932 786 METQTALAVPDEDNCLVVYSSIQCP----E-SAHATIARCL---GIPEHNVRVIT------RRVGGAFGGKAIKAMPFNI 851 (864)
Q Consensus 786 mEp~~a~A~~~~dg~l~V~~stQ~p----~-~~r~~vA~~L---glp~~kV~V~~------~~~GGgFGgK~~~~~~~~~ 851 (864)
+...++.+....||.++|+++++.. + .+...+|+.| |+|.++|+|.. +..+|.+|++.+. ....
T Consensus 629 ~~~~~a~v~l~~DG~v~v~~g~~e~GqG~~T~~aQiaAe~L~~~Gip~~~V~v~~~DT~~~p~~~~t~gSr~t~--~~G~ 706 (907)
T 1vlb_A 629 PDASEAWAELNADGTITVHTAWEDHGQGADIGCVGTAHEALRPMGVAPEKIKFTWPNTATTPNSGPSGGSRQQV--MTGN 706 (907)
T ss_dssp TCEEEEEEEECTTSCEEEECCCCCSSSCHHHHHHHHHHHHHGGGTCCGGGEEECCCBTTTSCCCCCSCTTCHHH--HHHH
T ss_pred CCCccEEEEEeCCCeEEEEECCccCCCCHHHHHHHHHHHHHhhcCCCHHHEEEecCCCCCCCCCCCCccchHHH--HHHH
Confidence 3456788888889999999988544 3 3557789999 99999999985 4567888888653 2333
Q ss_pred HHHHHHHHcC
Q 002932 852 VGATIELLTV 861 (864)
Q Consensus 852 ~aAlaA~~t~ 861 (864)
++-.||.++.
T Consensus 707 Av~~Aa~~l~ 716 (907)
T 1vlb_A 707 AIRVACENLL 716 (907)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4444555543
No 95
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=62.69 E-value=4.9 Score=51.67 Aligned_cols=60 Identities=13% Similarity=0.028 Sum_probs=45.8
Q ss_pred CCCCCeEEEEECCCCcEEEEeCCCCh----H-HHHHHHHHHhCCCCCCEEEE------eCCcCCCCCCCCC
Q 002932 785 YMETQTALAVPDEDNCLVVYSSIQCP----E-SAHATIARCLGIPEHNVRVI------TRRVGGAFGGKAI 844 (864)
Q Consensus 785 ~mEp~~a~A~~~~dg~l~V~~stQ~p----~-~~r~~vA~~Lglp~~kV~V~------~~~~GGgFGgK~~ 844 (864)
.....++++....||.++|+.+++.. + .+...+|+.||+|.++|+|. .+..+|.+|++.+
T Consensus 1018 ~~~~~~a~v~i~~DGsv~v~~G~~e~GQG~~T~~aQiaAe~LGip~e~I~v~~~DT~~~P~~~gt~gSr~t 1088 (1335)
T 3zyv_A 1018 FYYQAAALVQIYTDGSVLVAHGGVELGQGINTKMIQVASRELKIPMSYIHLDEMSTVTVPNTVTTGASTGA 1088 (1335)
T ss_dssp GGGCEEEEEEECTTSCEEECBSCCCSSSCHHHHHHHHHHHHHTSCGGGEEECCEETTTSCSCCCSCTTCHH
T ss_pred cccceeEEEEEeCCCcEEEEECCcCCCCchhHHHHHHHHHHhCCCHHHEEEecCCcCCCCCCCCCcccHHH
Confidence 34556778888888999999988654 2 35567789999999999996 4566777777754
No 96
>1tyg_B YJBS; alpha beta barrel, protein-protein complex, THis, BIOS protein; 3.15A {Bacillus subtilis} SCOP: d.15.3.2
Probab=50.96 E-value=16 Score=31.56 Aligned_cols=32 Identities=13% Similarity=0.235 Sum_probs=21.4
Q ss_pred ceeEEEEEECCEEEEEecCCCC-CcHHHHHhhccCCc
Q 002932 10 TRHSVVFAVNGEKFEVSSVDPS-TTLLEFLRYHTRFK 45 (864)
Q Consensus 10 ~~~~i~~~lNg~~~~~~~~~~~-~~Ll~~LR~~~~l~ 45 (864)
....++++|||+.+++. .. .||.++|.. +++.
T Consensus 17 ~~~~M~I~vNGe~~el~---~~~~Tv~dLL~~-L~~~ 49 (87)
T 1tyg_B 17 IGGRHMLQLNGKDVKWK---KDTGTIQDLLAS-YQLE 49 (87)
T ss_dssp -----CEEETTEEECCS---SSCCBHHHHHHH-TTCT
T ss_pred CCcceEEEECCEEEECC---CCCCcHHHHHHH-hCCC
Confidence 34567899999998864 44 899999975 5654
No 97
>2l32_A Small archaeal modifier protein 2; protein BIN; NMR {Haloferax volcanii}
Probab=49.65 E-value=11 Score=31.53 Aligned_cols=34 Identities=24% Similarity=0.307 Sum_probs=26.1
Q ss_pred eEEEEEECCEEEEEecCCCCCcHHHHHhhccCCcc
Q 002932 12 HSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKS 46 (864)
Q Consensus 12 ~~i~~~lNg~~~~~~~~~~~~~Ll~~LR~~~~l~g 46 (864)
|+|++.|||+....-++++..|+.|+|+. +++..
T Consensus 1 M~v~Vkl~g~~~~~~ev~~g~Tv~dLL~~-Lgl~~ 34 (74)
T 2l32_A 1 MNVTVEVVGEETSEVAVDDDGTYADLVRA-VDLSP 34 (74)
T ss_dssp CEEEEECSSSSEEEEECSTTCSHHHHHHT-TCCCS
T ss_pred CEEEEEEeCccceeEEcCCCCcHHHHHHH-cCCCc
Confidence 78999999986332247789999999974 67763
No 98
>2kl0_A Putative thiamin biosynthesis THis; structural genomics, PSI-2, protein structure initiative, N structural genomics consortium, NESG; NMR {Rhodopseudomonas palustris} PDB: 2lek_A
Probab=42.28 E-value=25 Score=29.23 Aligned_cols=61 Identities=20% Similarity=0.129 Sum_probs=39.2
Q ss_pred EEEECCEEEEEecCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEeecCCCcccCCceeecccccchhhc-cCcee
Q 002932 15 VFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSV-NGCLI 93 (864)
Q Consensus 15 ~~~lNg~~~~~~~~~~~~~Ll~~LR~~~~l~g~K~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~p~~~~-~g~~i 93 (864)
+++|||+++++ ..+||.++|.+ +++.. -.|.|.+ |+.-|..--..-..+ +|-.|
T Consensus 2 ~I~vNG~~~e~----~~~Tl~~LL~~-l~~~~----------~~vAV~v----------Ng~iVpr~~~~~~~L~dGD~v 56 (73)
T 2kl0_A 2 LVTINGEQREV----QSASVAALMTE-LDCTG----------GHFAVAL----------NYDVVPRGKWDETPVTAGDEI 56 (73)
T ss_dssp CEEETTEEECC----CCSBHHHHHHH-TTCCS----------SSCEEEE----------SSSEECHHHHTTCBCCTTCEE
T ss_pred EEEECCEEEEc----CCCcHHHHHHH-cCCCC----------CcEEEEE----------CCEECChHHcCcccCCCCCEE
Confidence 57999998876 36999999974 67652 2346777 555554443322233 56777
Q ss_pred EEecCCC
Q 002932 94 TTSEGLG 100 (864)
Q Consensus 94 ~TvEgl~ 100 (864)
.-+--++
T Consensus 57 eIv~~Vg 63 (73)
T 2kl0_A 57 EILTPRQ 63 (73)
T ss_dssp EEECCCC
T ss_pred EEEcccc
Confidence 6666665
No 99
>1v2y_A 3300001G02RIK protein; hypothetical protein, ubiquitin-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.15.1.1
Probab=42.25 E-value=14 Score=33.02 Aligned_cols=32 Identities=25% Similarity=0.390 Sum_probs=27.1
Q ss_pred CCCCceeEEEE-EECCEEEEEecCCCCCcHHHHH
Q 002932 6 QHGGTRHSVVF-AVNGEKFEVSSVDPSTTLLEFL 38 (864)
Q Consensus 6 ~~~~~~~~i~~-~lNg~~~~~~~~~~~~~Ll~~L 38 (864)
+.+|..|.|++ +++|+.++++ |+|+.|+.++=
T Consensus 2 ~~~~~~M~I~Vk~l~g~~~~v~-V~~~~TV~dLK 34 (105)
T 1v2y_A 2 SSGSSGMTVRVCKMDGEVMPVV-VVQNATVLDLK 34 (105)
T ss_dssp CCCCCSEEEEEECSSSCEEEEE-ECTTCBHHHHH
T ss_pred CCCCCcEEEEEEecCCCEEEEE-ECCCChHHHHH
Confidence 45777899999 6899999998 89999988754
No 100
>1erd_A Pheromone ER-2; NMR {Euplotes raikovi} SCOP: a.10.1.1
Probab=38.88 E-value=14 Score=25.83 Aligned_cols=28 Identities=21% Similarity=0.507 Sum_probs=25.4
Q ss_pred HhHHHHhcCCCCCCCCChHHHHHHHHHH
Q 002932 109 IHQRFAGFHASQCGFCTPGMCMSLFSAL 136 (864)
Q Consensus 109 iq~a~~~~~~~qCG~CtPG~vm~~~~ll 136 (864)
..|||+.+.-+-||||.--.-|+..++-
T Consensus 5 ceqamascehtmcgycqgplymtcigit 32 (40)
T 1erd_A 5 CEQAMASCEHTMCGYCQGPLYMTCIGIT 32 (40)
T ss_dssp HHHHHHHTCGGGGGGSCHHHHHHHHHHH
T ss_pred HHHHHHhccccccccccCCeeEEEEeec
Confidence 5789999999999999999999998876
No 101
>3kwl_A Uncharacterized protein; putative oxidoreductase, multidomain, unknown function; 1.94A {Helicobacter pylori}
Probab=38.32 E-value=31 Score=39.62 Aligned_cols=96 Identities=7% Similarity=0.064 Sum_probs=62.0
Q ss_pred EEEEEecCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEeecCCCcccCCceeecccccchhhcc---CceeEEec
Q 002932 21 EKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVN---GCLITTSE 97 (864)
Q Consensus 21 ~~~~~~~~~~~~~Ll~~LR~~~~l~g~K~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~p~~~~~---g~~i~TvE 97 (864)
+.++|+ +++++|+||.|..- . -..|.+ +|.+.| ||++..+ .+++..+. | ..+|||
T Consensus 43 ~~y~v~-~~~~~~vLd~L~~i-k----~l~fr~----sCam~I----------NG~~~la-~t~~~~~~~~~~-~~i~ie 100 (514)
T 3kwl_A 43 ESYFLE-YQEDQYLLDLLKQL-K----GVSYSE----NIALKI----------NQIAVFE-DAKVSDLVAFFS-KEWVLD 100 (514)
T ss_dssp EEEEEE-CCTTCBHHHHHTTS-T----TCCCCS----SCCEEE----------TTEEECS-CCBHHHHHHHHC-SEEEEE
T ss_pred EEEEEe-CCCCCcHHHHHHHh-h----hCeeec----cceEEE----------CCEehhh-hhhHHHHhhccC-CcEEEE
Confidence 467786 78999999999653 2 444776 899999 8999999 55554431 3 367899
Q ss_pred CCCCCC-------------CCcchH----------hHHHHh---cCCCCCC-----CCChHHHHHHHHHHHh
Q 002932 98 GLGNSK-------------TGFHPI----------HQRFAG---FHASQCG-----FCTPGMCMSLFSALVD 138 (864)
Q Consensus 98 gl~~~~-------------~~~h~i----------q~a~~~---~~~~qCG-----~CtPG~vm~~~~ll~~ 138 (864)
-|.+-. +.|..| ++.-.+ +-.+-|. |-.|..++-+|-++..
T Consensus 101 Pl~~~pvikDLvvD~~~f~~~~~~i~~~~p~~~~~~~~~~~~~~~C~~aCp~~~~~f~Gpa~l~~a~r~~~d 172 (514)
T 3kwl_A 101 PLSKRYALKDLMIDEKAVLKNYEDFFKQVPYITKGEKEELEKFIQINFINPQTNPKYLGDGFFLYVKWLMKR 172 (514)
T ss_dssp CSCSTTEEETTEECHHHHHGGGHHHHHTCTTSCHHHHHGGGGTGGGGGTCCCCCTTCCCHHHHHHHHHHHHH
T ss_pred ECCCCcccccceeccHHHHHHHHHhhcCCCCCCHHHHHHHhhcChhhccCCCCCcccCcHHHHHHHHHHhcC
Confidence 997521 123333 211111 2222333 8889999999988843
No 102
>1rrb_A RAF-1 RBD, RAF proto-oncogene serine/threonine-protein kinase; RAS-binding domain, transferase, riken structural genomics/proteomics initiative; NMR {Rattus norvegicus} SCOP: d.15.1.5
Probab=36.95 E-value=18 Score=32.29 Aligned_cols=44 Identities=16% Similarity=0.237 Sum_probs=32.2
Q ss_pred EEEEEE-CCEEEEEecCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEe
Q 002932 13 SVVFAV-NGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLS 64 (864)
Q Consensus 13 ~i~~~l-Ng~~~~~~~~~~~~~Ll~~LR~~~~l~g~K~gC~~G~CGaCtV~~~ 64 (864)
.|..+| |+++-.|+ |.|.+||-|.|-.-+.+++. .|--|.|-..
T Consensus 20 ~ir~hLPNqQrT~V~-VrpG~tlrdaL~KaLk~R~L-------~pe~C~Vy~~ 64 (107)
T 1rrb_A 20 TIRVFLPNKQRTVVN-VRNGMSLHDCLMKALKVRGL-------QPECCAVFRL 64 (107)
T ss_dssp EEEEECTTTCCEEEE-CCTTCBHHHHHHHHHHHHTC-------CTTTEEEEEC
T ss_pred eEEEECCCCCeEEEE-ecCCcCHHHHHHHHHHHcCC-------CHHHceeEEc
Confidence 577777 77777776 89999999999665554444 2566888754
No 103
>2k5p_A THis protein, thiamine-biosynthesis protein; NESG, GMR137, structural genomics, PSI-2, protein structure initiative; NMR {Geobacter metallireducens gs-15} PDB: 3cwi_A
Probab=33.66 E-value=21 Score=30.09 Aligned_cols=66 Identities=18% Similarity=0.137 Sum_probs=39.8
Q ss_pred EEEEECCEEEEEecCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEeecCCCcccCCceeecccccchhhc-cCce
Q 002932 14 VVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSV-NGCL 92 (864)
Q Consensus 14 i~~~lNg~~~~~~~~~~~~~Ll~~LR~~~~l~g~K~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~p~~~~-~g~~ 92 (864)
++++|||+++++.. ...+||.++|.+ +++.. -..|.|.+ |+.-|..--..-..+ +|-.
T Consensus 1 M~I~vNGe~~e~~~-~~~~Tl~~LL~~-l~~~~---------~~~vAVav----------Ng~iVpr~~~~~~~L~dGD~ 59 (78)
T 2k5p_A 1 MNLTVNGKPSTVDG-AESLNVTELLSA-LKVAQ---------AEYVTVEL----------NGEVLEREAFDATTVKDGDA 59 (78)
T ss_dssp CEEEETTEEEECSS-CSCEEHHHHHHH-HTCSC---------TTTCCEEE----------TTEECCTTHHHHCEECSSBC
T ss_pred CEEEECCEEEEcCC-CCCCcHHHHHHH-cCCCC---------CCcEEEEE----------CCEECChHHcCcccCCCCCE
Confidence 36899999988641 146899999975 57651 11245777 555555443332233 4666
Q ss_pred eEEecCCC
Q 002932 93 ITTSEGLG 100 (864)
Q Consensus 93 i~TvEgl~ 100 (864)
|.-+--++
T Consensus 60 IEIv~~Vg 67 (78)
T 2k5p_A 60 VEFLYFMG 67 (78)
T ss_dssp EEECCCCC
T ss_pred EEEEeeec
Confidence 66555554
No 104
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B*
Probab=33.16 E-value=16 Score=37.68 Aligned_cols=16 Identities=44% Similarity=0.947 Sum_probs=14.4
Q ss_pred ccCCCCCCCCccEEEE
Q 002932 48 KLGCGEGGCGACVVLL 63 (864)
Q Consensus 48 K~gC~~G~CGaCtV~~ 63 (864)
+-.|+.|.||+|+|-.
T Consensus 223 ~m~CG~G~C~~C~~~~ 238 (262)
T 1ep3_B 223 RMACGIGACYACVEHD 238 (262)
T ss_dssp CCSSSSSSSCTTEEEE
T ss_pred cccCcccccccCCccc
Confidence 4689999999999976
No 105
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=30.19 E-value=19 Score=28.24 Aligned_cols=31 Identities=39% Similarity=0.432 Sum_probs=24.9
Q ss_pred HHHHHHHHhCCCCCCEEEEeCCcCC---CCCCCC
Q 002932 813 AHATIARCLGIPEHNVRVITRRVGG---AFGGKA 843 (864)
Q Consensus 813 ~r~~vA~~Lglp~~kV~V~~~~~GG---gFGgK~ 843 (864)
+-+.+++.||+|++.|.|....+-. ||||+.
T Consensus 24 lt~~l~~~lg~~~~~v~V~i~e~~~~~w~~gG~~ 57 (64)
T 3abf_A 24 LTEMASRLLGEPYEEVRVILYEVRRDQWAAGGVL 57 (64)
T ss_dssp HHHHHHHHTTCCGGGEEEEEEEECGGGEEETTEE
T ss_pred HHHHHHHHhCCCcccEEEEEEEcCHHHeeECCEE
Confidence 4457788999999999999887765 777764
No 106
>1f0z_A THis protein; ubiquitin fold, transport protein; NMR {Escherichia coli} SCOP: d.15.3.2 PDB: 1zud_2
Probab=25.99 E-value=24 Score=28.35 Aligned_cols=27 Identities=15% Similarity=0.223 Sum_probs=20.8
Q ss_pred EEEECCEEEEEecCCCCCcHHHHHhhccCCc
Q 002932 15 VFAVNGEKFEVSSVDPSTTLLEFLRYHTRFK 45 (864)
Q Consensus 15 ~~~lNg~~~~~~~~~~~~~Ll~~LR~~~~l~ 45 (864)
+++|||+.+++. ...|+.++|+. +++.
T Consensus 2 ~i~vNg~~~~~~---~~~tv~~ll~~-l~~~ 28 (66)
T 1f0z_A 2 QILFNDQAMQCA---AGQTVHELLEQ-LDQR 28 (66)
T ss_dssp CEEESSCEECCC---TTCCHHHHHHH-HTCC
T ss_pred EEEECCEEEEcC---CCCcHHHHHHH-cCCC
Confidence 589999998764 46899999975 5553
No 107
>2l5b_A Activator of apoptosis harakiri; BCL-2, BH3-only, transmembrane domain; NMR {Synthetic}
Probab=24.16 E-value=50 Score=22.28 Aligned_cols=15 Identities=27% Similarity=0.031 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHcCCC
Q 002932 849 FNIVGATIELLTVYR 863 (864)
Q Consensus 849 ~~~~aAlaA~~t~~~ 863 (864)
.+..+|+||+++|||
T Consensus 15 aa~vaalaawll~rr 29 (32)
T 2l5b_A 15 AAQVAALAAWLLGRR 29 (32)
T ss_dssp HHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHhcc
Confidence 344578999999997
No 108
>4hcn_B Polyubiquitin, ubiquitin; ubiquitin/NEDD8 deamidase, NEDD8, protein binding; 2.60A {Saccharomyces cerevisiae}
Probab=23.73 E-value=48 Score=28.65 Aligned_cols=35 Identities=14% Similarity=0.217 Sum_probs=24.9
Q ss_pred CCCCCceeEEEEE-ECCEEEEEecCCCCCcHHHHHhh
Q 002932 5 QQHGGTRHSVVFA-VNGEKFEVSSVDPSTTLLEFLRY 40 (864)
Q Consensus 5 ~~~~~~~~~i~~~-lNg~~~~~~~~~~~~~Ll~~LR~ 40 (864)
-++.+..|.|.+. +||+.+.++ ++++.|+.++-..
T Consensus 16 ~~~~~~~m~I~Vk~~~g~~~~l~-v~~~~TV~~LK~~ 51 (98)
T 4hcn_B 16 LYFQGRPMQIFVKTLTGKTITLE-VESSDTIDNVKSK 51 (98)
T ss_dssp ------CCEEEEEETTCCEEEEE-CCTTCBHHHHHHH
T ss_pred CCCCCCeEEEEEEeCCCCEEEEE-ECCCCcHHHHHHH
Confidence 4567788999998 699999997 8999999887654
No 109
>1v5t_A 8430435I17RIK protein; hypothetical protein, ubiquitin-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.15.1.1 PDB: 2kx3_A
Probab=23.37 E-value=59 Score=27.65 Aligned_cols=39 Identities=15% Similarity=0.455 Sum_probs=28.9
Q ss_pred CCceeEEEEEECCEEEEE-ecCCCCCcHHHHHhhccCCccc
Q 002932 8 GGTRHSVVFAVNGEKFEV-SSVDPSTTLLEFLRYHTRFKSV 47 (864)
Q Consensus 8 ~~~~~~i~~~lNg~~~~~-~~~~~~~~Ll~~LR~~~~l~g~ 47 (864)
+...|.|++..+|+.+.+ + ++++.|+.++-..-...+|+
T Consensus 4 ~~~~m~i~Vk~~g~~~~i~~-v~~~~TV~~lK~~I~~~~gi 43 (90)
T 1v5t_A 4 GSSGLPIIVKWGGQEYSVTT-LSEDDTVLDLKQFLKTLTGV 43 (90)
T ss_dssp CCCSCCEEEEETTEEEEECS-CCSSSBHHHHHHHHHHHTCC
T ss_pred CCceEEEEEEECCEEEEEEE-eCCCCCHHHHHHHHHHHHCc
Confidence 345678888889999999 6 89999998877543334443
No 110
>3ny5_A Serine/threonine-protein kinase B-RAF; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics consortium; HET: MSE; 1.99A {Homo sapiens} SCOP: d.15.1.0
Probab=22.32 E-value=2.2e+02 Score=24.98 Aligned_cols=73 Identities=16% Similarity=0.079 Sum_probs=46.0
Q ss_pred eEEEEEE-CCEEEEEecCCCCCcHHHHHhhccCCcccccCCCCCCCCccEEEEeecCCCcccCCceeecccccchhhccC
Q 002932 12 HSVVFAV-NGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNG 90 (864)
Q Consensus 12 ~~i~~~l-Ng~~~~~~~~~~~~~Ll~~LR~~~~l~g~K~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~p~~~~~g 90 (864)
..|+.+| |+++-.|+ |.|++||-+.|-.-+.+++. .|-.|.|-... ++....+++. +-+..+.|
T Consensus 14 ~~irvhLPNqQrT~V~-VrpG~tlrdaL~KaLk~R~L-------~pe~C~Vy~~~-~~~~~~I~Wd------tDi~~L~g 78 (96)
T 3ny5_A 14 PIVRVFLPNKQRTVVP-ARCGVTVRDSLKKALMMRGL-------IPECCAVYRIQ-DGEKKPIGWD------TDISWLTG 78 (96)
T ss_dssp CEEEEEETTTEEEEEE-CCTTCBHHHHHHHHHHTTTC-------CGGGEEEEECC----CEEECTT------BBGGGGTT
T ss_pred CEEEEECCCCceEEEE-ecCCcCHHHHHHHHHHHcCC-------ChHHeEEEEcc-CCCcCccccc------ccchhccc
Confidence 4567777 77787776 89999999999766655555 35568887532 1212222222 22347778
Q ss_pred ceeEEecCCC
Q 002932 91 CLITTSEGLG 100 (864)
Q Consensus 91 ~~i~TvEgl~ 100 (864)
.+| .||-|.
T Consensus 79 eEL-~Ve~ld 87 (96)
T 3ny5_A 79 EEL-HVEVLE 87 (96)
T ss_dssp CEE-EEEECC
T ss_pred ceE-Eehhhh
Confidence 887 477765
No 111
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=20.06 E-value=37 Score=26.20 Aligned_cols=31 Identities=19% Similarity=0.333 Sum_probs=23.1
Q ss_pred HHHHHHHHHhCCCCCCEEEEeCCcCC---CCCCC
Q 002932 812 SAHATIARCLGIPEHNVRVITRRVGG---AFGGK 842 (864)
Q Consensus 812 ~~r~~vA~~Lglp~~kV~V~~~~~GG---gFGgK 842 (864)
.+...+++.||+|+++|.|....+.. ||||+
T Consensus 22 ~i~~~l~~~lg~~~~~v~V~i~e~~~~~w~~gG~ 55 (61)
T 2opa_A 22 KVTEAVKETTGASEEKIVVFIEEMRKDHYAVAGK 55 (61)
T ss_dssp HHHHHHHHHHCCCGGGCEEEEEEECGGGCEETTE
T ss_pred HHHHHHHHHhCcCcCeEEEEEEEcCHHHeeECCE
Confidence 34567788999999999998776643 55554
Done!