BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002933
(864 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SIU2|NCBP1_ARATH Nuclear cap-binding protein subunit 1 OS=Arabidopsis thaliana
GN=ABH1 PE=1 SV=2
Length = 848
Score = 1270 bits (3287), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 602/865 (69%), Positives = 724/865 (83%), Gaps = 18/865 (2%)
Query: 1 MSSWKNLLLKIGDNCPEYGNSDDLKDHIETCFGVIRRELEHSSDDVPHYIINCAEQIPHK 60
MS+WK LLL+IG+ PEYG S D KDHIETCFGVIRRE+E S D V +++ CAEQ+PHK
Sbjct: 1 MSNWKTLLLRIGEKGPEYGTSSDYKDHIETCFGVIRREIERSGDQVLPFLLQCAEQLPHK 60
Query: 61 IPLYGTLVGLLNLENEDFVKKVVETTQRKFQDALDSGNCDRIRILMRFLTVMMCSKILQP 120
IPLYGTL+GLLNLENEDFV+K+VE+ FQ ALDSGNC+ IRIL+RF+T ++CSK++QP
Sbjct: 61 IPLYGTLIGLLNLENEDFVQKLVESVHANFQVALDSGNCNSIRILLRFMTSLLCSKVIQP 120
Query: 121 GSLVVVFETLLSSAATTVDEDKGNPSWQARADFYVTCILSCLPWGGAELIEQVPEEIERV 180
SL+VVFETLLSSAATTVDE+KGNPSWQ +ADFYV CILS LPWGG+EL EQVP+EIERV
Sbjct: 121 ASLIVVFETLLSSAATTVDEEKGNPSWQPQADFYVICILSSLPWGGSELAEQVPDEIERV 180
Query: 181 MAGLEAYLSIRRHTSDTGLSFFEEDDESGKGLVEKDFLEDLWHRVQALSSNGWKLDSVPR 240
+ G++AYLSIR+++S +GL+FF + E L EKDF+EDL R+Q+L+SNGWKL+SVPR
Sbjct: 181 LVGIQAYLSIRKNSSTSGLNFFH-NGEFESSLAEKDFVEDLLDRIQSLASNGWKLESVPR 239
Query: 241 PHLSFEAQLVSGKSHEFGPISCPEQPDVPTAVSGITHGKQKHDAELKYPQRIRRLNIFPA 300
PHLSFEAQLV+GK HE PI C EQP P+ S GKQKHDA +YPQRIRRLNIFPA
Sbjct: 240 PHLSFEAQLVAGKFHELRPIKCMEQPSPPSDHSRAYSGKQKHDALTRYPQRIRRLNIFPA 299
Query: 301 SKSEVDMQPIDRFILEEYLLDVLLFFNGCRKECAFYMVNLPVPFRYEYLMAETIFSQLLL 360
+K E D+QPIDRF++EEYLLDVL + NGCRKECA YM NLPV FRYEYLMAET+FSQ+LL
Sbjct: 300 NKME-DVQPIDRFVVEEYLLDVLFYLNGCRKECASYMANLPVTFRYEYLMAETLFSQILL 358
Query: 361 LPQPPFKPIYYTLVIMDLCKALPGAFPAVVAGAVRALFDKIADLDMECRIRFILWFSHHL 420
LPQPPFK +YYTLVIMDLCKALPGAFPAVVAGAVRALF+KI+DLDME R R ILWFSHHL
Sbjct: 359 LPQPPFKTLYYTLVIMDLCKALPGAFPAVVAGAVRALFEKISDLDMESRTRLILWFSHHL 418
Query: 421 SNFQFIWPWEEWAYVLDLPKWAPQRVFVQEVLEREVRLSYWDKVKQSIENAPALEELLPP 480
SNFQFIWPWEEWA+VLDLPKWAP+RVFVQE+L+REVRLSYWDK+KQSIENA ALEELLPP
Sbjct: 419 SNFQFIWPWEEWAFVLDLPKWAPKRVFVQEILQREVRLSYWDKIKQSIENATALEELLPP 478
Query: 481 KGGPNFKYSMEDGRERSEEHALSAELTNKVKGRQTAREIIVWVEESVYPIHGLGVTIKVV 540
K GPNF YS+E+G+E++EE LSAEL+ KVK +QTAR++IVW+EE++YP+HG VT+ +V
Sbjct: 479 KAGPNFMYSLEEGKEKTEEQQLSAELSRKVKEKQTARDMIVWIEETIYPVHGFEVTLTIV 538
Query: 541 VQTLLDIGSKSFTHLITVLERYGQVISKICPDHDKQLMLIEEVSLFWKNNTQNAAISIDR 600
VQTLLDIGSKSFTHL+TVLERYGQV SK+CPD+DKQ+ML+ +VS +WKNN Q A++IDR
Sbjct: 539 VQTLLDIGSKSFTHLVTVLERYGQVFSKLCPDNDKQVMLLSQVSTYWKNNVQMTAVAIDR 598
Query: 601 MMGYRLISNLAIVRWVFSPENIDQFHASDRPWEVLRNAVSKTYNRICDLRKEIISLKKGV 660
MMGYRL+SN AIVRWVFSPEN+DQFH SD+PWE+L NA++KTYNRI DLRK+I ++ K V
Sbjct: 599 MMGYRLVSNQAIVRWVFSPENVDQFHVSDQPWEILGNALNKTYNRISDLRKDISNITKNV 658
Query: 661 TLAEEAAAKAKAELEAAESKLSLVDGEPVLGGNPARLSRLKLHAEKAKNEEISAKESLEA 720
+AE+A+A A+ ELEAAESKLSLV+GEPVLG NPA++ RLK EK E+S +ESLEA
Sbjct: 659 LVAEKASANARVELEAAESKLSLVEGEPVLGENPAKMKRLKSTVEKTGEAELSLRESLEA 718
Query: 721 KEALFARAVEENEALYLSLYRNFSNVLMERLPDASRAGTLQDLKSTHADAMAVDLEEPSA 780
KEAL RA+ E E L L L+++F VL ERLPD ++ ++QDLKS A+ ++PSA
Sbjct: 719 KEALLNRALSETEVLLLLLFQSFLGVLKERLPDPTKVRSVQDLKSIGAED-----DKPSA 773
Query: 781 MELDNENGRPKKSQSNGGSSGNVYNIGEKEQWCLSTLGYVKAFSRQYASEIWPHMEKLDA 840
M++D+ENG PKKS +GE+EQWCLSTLGY+ AF+RQYASEIWPHMEKL++
Sbjct: 774 MDVDSENGNPKKS----------CEVGEREQWCLSTLGYLTAFTRQYASEIWPHMEKLES 823
Query: 841 EVLS-EDTHPLFRRAVYSGLHRPIN 864
EV S ED HPLF +A+ S L P++
Sbjct: 824 EVFSGEDVHPLFLQAISSALQFPLH 848
>sp|Q10LJ0|NCBP1_ORYSJ Nuclear cap-binding protein subunit 1 OS=Oryza sativa subsp.
japonica GN=ABH1 PE=2 SV=1
Length = 867
Score = 1158 bits (2996), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 550/865 (63%), Positives = 689/865 (79%), Gaps = 7/865 (0%)
Query: 2 SSWKNLLLKIGDNCPEYGNSDDLKDHIETCFGVIRRELEHSSDDVPHYIINCAEQIPHKI 61
+ W+ LLL+IGD CPEYG S D K+HIETC+GV+ RE EHS D + +++ CA+Q+PHKI
Sbjct: 3 AGWRTLLLRIGDRCPEYGGSADHKEHIETCYGVLCREYEHSKDAMFEFLLQCADQLPHKI 62
Query: 62 PLYGTLVGLLNLENEDFVKKVVETTQRKFQDALDSGNCDRIRILMRFLTVMMCSKILQPG 121
P +G L+GL+NLENEDF K +V+TT QDAL + N DRIRIL+RFL +MCSK++ P
Sbjct: 63 PFFGVLIGLINLENEDFSKGIVDTTHANLQDALHNENRDRIRILLRFLCGLMCSKVVLPN 122
Query: 122 SLVVVFETLLSSAATTVDEDKGNPSWQARADFYVTCILSCLPWGGAELIEQVPEEIERVM 181
S++ FE LLSSAAT +DE+ GNPSWQ RADFYV CIL+ LPWGG+EL EQVP+E ERV+
Sbjct: 123 SIIETFEALLSSAATILDEETGNPSWQPRADFYVYCILASLPWGGSELFEQVPDEFERVL 182
Query: 182 AGLEAYLSIRRHTSDTGLSFFEEDDESGKGLVEKDFLEDLWHRVQALSSNGWKLDSVPRP 241
G+++Y+SIRRH D S FE D+ G +KDF+EDLW R+Q LS NGWK+ SVP+P
Sbjct: 183 VGIQSYISIRRHFDDIAFSVFETDE--GNSPNKKDFIEDLWERIQVLSRNGWKVKSVPKP 240
Query: 242 HLSFEAQLVSGKSHEFGPISCPEQPDVPTAVSGITHGKQKHDAELKYPQRIRRLNIFPAS 301
HLSFEAQLV+G SH F PISCP P + + S I G++KH+A+LKYPQR+RRL+IFP +
Sbjct: 241 HLSFEAQLVAGVSHRFSPISCPP-PTISQSSSEIVKGQEKHEADLKYPQRLRRLHIFPTN 299
Query: 302 KSEVDMQPIDRFILEEYLLDVLLFFNGCRKECAFYMVNLPVPFRYEYLMAETIFSQLLLL 361
K+E +MQP+DRF++EE +LDVLLFFNGCRKECAFY+V+LPVPFRYEYLMAETIFSQLLLL
Sbjct: 300 KAE-NMQPVDRFVVEECILDVLLFFNGCRKECAFYLVSLPVPFRYEYLMAETIFSQLLLL 358
Query: 362 PQPPFKPIYYTLVIMDLCKALPGAFPAVVAGAVRALFDKIADLDMECRIRFILWFSHHLS 421
P PPF+PIYYTLVI+DLCKALPGAFP+VV GAV ALFD+I+++DMECR R ILWFSHHLS
Sbjct: 359 PNPPFRPIYYTLVIIDLCKALPGAFPSVVVGAVHALFDRISNMDMECRTRLILWFSHHLS 418
Query: 422 NFQFIWPWEEWAYVLDLPKWAPQRVFVQEVLEREVRLSYWDKVKQSIENAPALEELLPPK 481
NFQFIWPW+EWAYV DLPKWAPQRVFVQEVLERE+RLSY+DK+KQSIE+A LEELLPPK
Sbjct: 419 NFQFIWPWQEWAYVKDLPKWAPQRVFVQEVLEREIRLSYFDKIKQSIEDAVELEELLPPK 478
Query: 482 GGPNFKYSMEDGRERSEEHALSAELTNKVKGRQTAREIIVWVEESVYPIHGLGVTIKVVV 541
GPNF+Y ++G+E ++ H LS EL V+GR+T +II WV+E + P++G + VV
Sbjct: 479 AGPNFRYHSDEGKESTDGHRLSKELVAMVRGRKTQGDIISWVDEKIIPVNGAKFALDVVS 538
Query: 542 QTLLDIGSKSFTHLITVLERYGQVISKICPDHDKQLMLIEEVSLFWKNNTQNAAISIDRM 601
QTLLDIGSKSFTHLITVLERYGQ+ISK+CP+ + QL+L++EVS +WKN+TQ AI+IDRM
Sbjct: 539 QTLLDIGSKSFTHLITVLERYGQIISKLCPNEEMQLLLMDEVSAYWKNSTQMIAIAIDRM 598
Query: 602 MGYRLISNLAIVRWVFSPENIDQFHASDRPWEVLRNAVSKTYNRICDLRKEIISLKKGVT 661
MGYRL+SNLAIV+WVFSP N+DQFH SDRPWE+LRNAVSKTYNRI DLRKEI +L+KG+
Sbjct: 599 MGYRLLSNLAIVKWVFSPANVDQFHVSDRPWEILRNAVSKTYNRIFDLRKEIQTLRKGLQ 658
Query: 662 LAEEAAAKAKAELEAAESKLSLVDGEPVLGGNPARLSRLKLHAEKAKNEEISAKESLEAK 721
A+EA+ KA ELE A+S + +VDG+PV NP RL RL+ A+KAK E++ +ESLEAK
Sbjct: 659 AAKEASEKAARELEEAKSIIEIVDGQPVPSENPGRLRRLQARADKAKEGEVTTEESLEAK 718
Query: 722 EALFARAVEENEALYLSLYRNFSNVLMERLPDASRAGTLQDLKST--HADAMAVDLEEPS 779
EAL AR +EE++ L L+++F VL ERLP S G + +L++ + ++ A D E +
Sbjct: 719 EALLARGLEESKELLRLLFKSFVEVLTERLPPISADGDVPNLRAGDPNVNSSARD-PEAT 777
Query: 780 AMELDNENGRPKKSQSNGGSSGNVYNIGEKEQWCLSTLGYVKAFSRQYASEIWPHMEKLD 839
ME+DNENG SQ NG + +N+GE EQWCL TLGY+K+FSRQYA+EIW H+ LD
Sbjct: 778 TMEIDNENGGDNDSQLNGQNKKISHNVGELEQWCLCTLGYLKSFSRQYATEIWSHIAMLD 837
Query: 840 AEVLSEDTHPLFRRAVYSGLHRPIN 864
E+ + HPL R+A +SGL RP +
Sbjct: 838 QEIFVGNIHPLIRKAAFSGLCRPTS 862
>sp|Q6DIE2|NCBP1_XENTR Nuclear cap-binding protein subunit 1 OS=Xenopus tropicalis
GN=ncbp1 PE=2 SV=1
Length = 791
Score = 292 bits (747), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 212/787 (26%), Positives = 375/787 (47%), Gaps = 118/787 (14%)
Query: 5 KNLLLKIGDNCPEYGNSDDLKDHIETCFGVIRRELEHSSDDVPHYIINCAEQIPHKIPLY 64
++L+ ++G+ ++ L+ ++E GV+ +L + + + + A +P K+ +Y
Sbjct: 32 ESLICRVGEK-----STSSLESNLEGLAGVLEADLPNYKSKILRILCSVARTLPEKMTVY 86
Query: 65 GTLVGLLNLENEDFVKKVVETTQRKFQDALDSGNCDRIRILMRFLTVMMCSKILQPGSLV 124
TLVGLLN N +F + VE R ++ + + L+RFL ++ ++ S+V
Sbjct: 87 TTLVGLLNARNYNFGGEFVEAMIRHLKETIKLNAYNEAVYLVRFLCDLVNCHVIAAPSMV 146
Query: 125 VVFETLLSSAATTVDEDKGNPSWQARADFYVTCILSCLPWGGAELIEQVPEEIERVMAGL 184
+FE+ + T +ED Q R+D+YV +LS LPW G EL E+ E++R+++ +
Sbjct: 147 AMFESFV---GVTQEEDIP----QVRSDWYVYAVLSSLPWVGKELYEKKDVEMDRILSQI 199
Query: 185 EAYLSIRRHTSDTGLSFFEEDDESGKGLVEKDFLEDLWHRVQALSSNGWKLDSVPRPHLS 244
EAYL R+ + L + + K ++++L+ LW ++Q L + W+ + RP+L+
Sbjct: 200 EAYLKQRQKLHVSILQVWSAE----KPHPQEEYLDCLWAQIQKLKKDRWQERHILRPYLA 255
Query: 245 FEAQLVSGKSHEFGPISCPEQPDVPTAVSGITHGKQKHDAELKYPQRIRRL--------- 295
F++ L H P + P + D+ P+ + R+
Sbjct: 256 FDSVLCEALQHNLPPFTPPPHTE---------------DSVYPVPRVVFRMFDYTDAPEG 300
Query: 296 NIFPASKSEVDMQPIDRFILEEYLLDVLLFFNGCRKECAFYMVNLP----VPFRYEYLMA 351
+ P S S ++RF++EE L +L RK CA +++ P +P Y +
Sbjct: 301 PVMPGSHS------VERFVIEENLHCILRSHWRERKTCAAQLLSYPEKNKIPLNYH--IV 352
Query: 352 ETIFSQLLLLPQPPFKPIYYTLVIMDLCKALPGAFPAVVAGAVRALFDKIADLDMECRIR 411
E IF +L LP PP + YT ++++LCK PG+ P V+A A L+ ++ ++ C R
Sbjct: 353 EVIFGELFQLPNPPHLDVMYTTLLIELCKLQPGSLPQVLAQASEMLYTRLDTMNTICIDR 412
Query: 412 FILWFSHHLSNFQFIWPWEEWAYVL--DLPKWAPQRVFVQEVLEREVRLSYWDKVKQSIE 469
FI WFSHHLSNFQF W WE+W+ L DL K PQ FV+EVLE+ +RLSY ++ +
Sbjct: 413 FINWFSHHLSNFQFRWNWEDWSDCLSQDLDKPKPQ--FVREVLEKCMRLSYHQRILDIV- 469
Query: 470 NAPALEELLPPKGGPNFKYSMEDGRERSEEHALSAELTNKVKGRQTAREIIVWVEESVYP 529
A L P FKY ++ ++++ LTN +K + + +EI +++ P
Sbjct: 470 -PAAFSALYPASPSCVFKYG-DESNSALPGYSVAVALTNAIKNKASDKEIFNILKDIPNP 527
Query: 530 ------IHGLG---VTIKVVVQTLLDIGSKSFTHLITVLERYGQVISKICPDHDKQLMLI 580
G+ + I+V VQTLL + SKSF+H + L ++ + + + +L ++
Sbjct: 528 NQDDDDDEGISFNPLKIEVFVQTLLSLASKSFSHSFSALAKFHDIFKALSESDEGKLHIL 587
Query: 581 EEVSLFWKNNTQNAAISIDRMMGYRLISNLAIVRWVFSPE---NIDQFHASDRPWEVLRN 637
V WKN+ Q A+ +D+M+ +++ A+ W+FSPE + +F+ WE+L +
Sbjct: 588 RVVYDIWKNHPQMIAVLVDKMIRTQIVDCAAVANWIFSPELSRDFPRFYI----WEILHS 643
Query: 638 AVSKTYNRICDLRKEIISLKKGVTLAEEAAAKAKAELEAAESKLSLVDGEPVLGGNPARL 697
+ K + ++KE+ +K RL
Sbjct: 644 TIRKMNKHVQKIQKELEDMK-------------------------------------LRL 666
Query: 698 SRLKLHAEKAKNEEISAK------ESLEAKEALFARAVEENEALYLSLYRNFSNVLMERL 751
++ H + N+E S + E +E + A E + L+L +++ F +L E L
Sbjct: 667 AKQHKHRDSDDNDEDSGRKDGPLEEQIERLQEKVESAQSEQKNLFLVIFQRFIMILTEHL 726
Query: 752 PDASRAG 758
G
Sbjct: 727 VRCETGG 733
>sp|Q6GQD0|NBP1B_XENLA Nuclear cap-binding protein subunit 1-B OS=Xenopus laevis
GN=ncbp1-b PE=2 SV=1
Length = 791
Score = 292 bits (747), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 214/787 (27%), Positives = 377/787 (47%), Gaps = 118/787 (14%)
Query: 5 KNLLLKIGDNCPEYGNSDDLKDHIETCFGVIRRELEHSSDDVPHYIINCAEQIPHKIPLY 64
++L+ ++G+ ++ L+ ++E GV+ +L + + + + A +P K+ +Y
Sbjct: 32 ESLICRVGEK-----STSSLESNLEGLAGVLEADLPNYKNKILRILCFVARLLPEKMTVY 86
Query: 65 GTLVGLLNLENEDFVKKVVETTQRKFQDALDSGNCDRIRILMRFLTVMMCSKILQPGSLV 124
TLVGLLN N +F + VE R ++ + + L+RFL ++ ++ S+V
Sbjct: 87 TTLVGLLNARNYNFGGEFVEAMIRHLKETIKLNAYNEAIYLVRFLCDLVNCHVIAAPSMV 146
Query: 125 VVFETLLSSAATTVDEDKGNPSWQARADFYVTCILSCLPWGGAELIEQVPEEIERVMAGL 184
+FE+ + T +ED Q R+D+YV +LS LPW G EL E+ E++++++ +
Sbjct: 147 AMFESFV---GVTQEEDIP----QVRSDWYVYAVLSSLPWVGKELYEKKDVEMDQILSQI 199
Query: 185 EAYLSIRRHTSDTGLSFFEEDDESGKGLVEKDFLEDLWHRVQALSSNGWKLDSVPRPHLS 244
EAYL R+ + L + + K ++++L+ LW +VQ L + W+ + RP+L+
Sbjct: 200 EAYLKQRQKLHLSILQVWSAE----KPHPQEEYLDCLWAQVQKLKKDRWQERHIQRPYLA 255
Query: 245 FEAQLVSGKSHEFGPISCPEQPDVPTAVSGITHGKQKHDAELKYPQRIRRL--------- 295
F++ L H P + P + D+ P+ I R+
Sbjct: 256 FDSVLCEALQHNLPPFTPPPHTE---------------DSVYPVPRVIFRMFDYTDAPEG 300
Query: 296 NIFPASKSEVDMQPIDRFILEEYLLDVLLFFNGCRKECAFYMVNLP----VPFRYEYLMA 351
+ P S S ++RF++EE L +L RK CA +++ P +P Y +
Sbjct: 301 PVMPGSHS------VERFVIEENLHCILKSHWRERKTCAAQLLSYPEKNKIPLNYH--IV 352
Query: 352 ETIFSQLLLLPQPPFKPIYYTLVIMDLCKALPGAFPAVVAGAVRALFDKIADLDMECRIR 411
E IF +L LP PP + YT ++++LCK PG+ P V+A A L+ ++ ++ C R
Sbjct: 353 EVIFGELFQLPSPPQIDVMYTTLLIELCKLQPGSLPQVLAQASEMLYTRLDTMNTTCIDR 412
Query: 412 FILWFSHHLSNFQFIWPWEEWAYVL--DLPKWAPQRVFVQEVLEREVRLSYWDKVKQSIE 469
FI WFSHHLSNFQF W WE+WA L DL K PQ FV+EVLE+ +RLSY ++ ++
Sbjct: 413 FINWFSHHLSNFQFRWNWEDWADCLSQDLDKPKPQ--FVREVLEKCMRLSYHQRI---LD 467
Query: 470 NAPALEELLPPKGGPNFKYSMEDGRERSEEHALSAELTNKVKGRQTAREIIVWVE----- 524
PA L P N ++ ++++ LTN +K + + +EI ++
Sbjct: 468 IVPATFSALYPANPSNVIKYGDESNSALPGYSVAVILTNAIKNKASDKEIFNILKDIPNP 527
Query: 525 -ESVYPIHGLG---VTIKVVVQTLLDIGSKSFTHLITVLERYGQVISKICPDHDKQLMLI 580
+ Y G+G + I+V VQTLL++ SKSF+H + L ++ + + + +L ++
Sbjct: 528 NQDDYDDEGIGFNPLKIEVFVQTLLNLASKSFSHSFSALAKFHDIFKALSESDEGKLHIL 587
Query: 581 EEVSLFWKNNTQNAAISIDRMMGYRLISNLAIVRWVFSPE---NIDQFHASDRPWEVLRN 637
V WKN+ Q A+ +D+M+ +++ A+ W+FSPE + +F+ WE+L +
Sbjct: 588 RVVYDVWKNHPQMIAVLLDKMIRTQIVDCAAVANWIFSPELSPDFTRFYI----WEILHS 643
Query: 638 AVSKTYNRICDLRKEIISLKKGVTLAEEAAAKAKAELEAAESKLSLVDGEPVLGGNPARL 697
+ K + ++KE+ K+ RL
Sbjct: 644 TIRKMNKHVQKIQKELEDTKQ-------------------------------------RL 666
Query: 698 SRLKLHAEKAKNEEISAK------ESLEAKEALFARAVEENEALYLSLYRNFSNVLMERL 751
++ H + N+E S + E +E + A E + L+L +++ F +L E L
Sbjct: 667 AKQHKHRDSDDNDEDSGRKDGPLEEQIERLQEKVESAQSEQKNLFLVIFQRFIMILTEHL 726
Query: 752 PDASRAG 758
G
Sbjct: 727 VRCETGG 733
>sp|Q09161|NCBP1_HUMAN Nuclear cap-binding protein subunit 1 OS=Homo sapiens GN=NCBP1 PE=1
SV=1
Length = 790
Score = 290 bits (743), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 196/674 (29%), Positives = 335/674 (49%), Gaps = 71/674 (10%)
Query: 5 KNLLLKIGDNCPEYGNSDDLKDHIETCFGVIRRELEHSSDDVPHYIINCAEQIPHKIPLY 64
++L+ K+G+ ++ L+ ++E GV+ +L + + + A +P K+ +Y
Sbjct: 32 ESLICKVGEK-----SACSLESNLEGLAGVLEADLPNYKSKILRLLCTVARLLPEKLTIY 86
Query: 65 GTLVGLLNLENEDFVKKVVETTQRKFQDALDSGNCDRIRILMRFLTVMMCSKILQPGSLV 124
TLVGLLN N +F + VE R+ +++L + N + L+RFL+ ++ ++ S+V
Sbjct: 87 TTLVGLLNARNYNFGGEFVEAMIRQLKESLKANNYNEAVYLVRFLSDLVNCHVIAAPSMV 146
Query: 125 VVFETLLSSAATTVDEDKGNPSWQARADFYVTCILSCLPWGGAELIEQVPEEIERVMAGL 184
+FE +S T +ED Q R D+YV LS LPW G EL E+ E++R+ A
Sbjct: 147 AMFENFVS---VTQEEDVP----QVRRDWYVYAFLSSLPWVGKELYEKKDAEMDRIFANT 199
Query: 185 EAYLSIRRHTSDTGLSFFEEDDESGKGLVEKDFLEDLWHRVQALSSNGWKLDSVPRPHLS 244
E+YL R+ T L + D K ++++L+ LW ++Q L + W+ + RP+L+
Sbjct: 200 ESYLKRRQKTHVPMLQVWTAD----KPHPQEEYLDCLWAQIQKLKKDRWQERHILRPYLA 255
Query: 245 FEAQLVSGKSHEFGPISCPEQPDVPTAVSGITHGKQKHDAELKYPQRIRRL--------- 295
F++ L H P + P + D+ P+ I R+
Sbjct: 256 FDSILCEALQHNLPPFTPPPHTE---------------DSVYPMPRVIFRMFDYTDDPEG 300
Query: 296 NIFPASKSEVDMQPIDRFILEEYLLDVLLFFNGCRKECAFYMVNLP----VPFRYEYLMA 351
+ P S S ++RF++EE L ++ RK CA +V+ P +P Y +
Sbjct: 301 PVMPGSHS------VERFVIEENLHCIIKSHWKERKTCAAQLVSYPGKNKIPLNYH--IV 352
Query: 352 ETIFSQLLLLPQPPFKPIYYTLVIMDLCKALPGAFPAVVAGAVRALFDKIADLDMECRIR 411
E IF++L LP PP + YT ++++LCK PG+ P V+A A L+ ++ ++ C R
Sbjct: 353 EVIFAELFQLPAPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDR 412
Query: 412 FILWFSHHLSNFQFIWPWEEWAYVLDLPKWAPQRVFVQEVLEREVRLSYWDKVKQSIENA 471
FI WFSHHLSNFQF W WE+W+ L +P+ FV+EVLE+ +RLSY ++ +
Sbjct: 413 FINWFSHHLSNFQFRWSWEDWSDCLSQDPESPKPKFVREVLEKCMRLSYHQRILDIV--P 470
Query: 472 PALEELLPPKGGPNFKYSMEDGRERSEE---HALSAELTNKVKGRQTAREIIVWVEESVY 528
P L P +KY G E S H+++ L K + T EI +++
Sbjct: 471 PTFSALCPANPTCIYKY----GDESSNSLPGHSVALCLAVAFKSKATNDEIFSILKDVPN 526
Query: 529 P------IHGLG---VTIKVVVQTLLDIGSKSFTHLITVLERYGQVISKICPDHDKQLML 579
P G + I+V VQTLL + +KSF+H + L ++ +V + + +L +
Sbjct: 527 PNQDDDDDEGFSFNPLKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHV 586
Query: 580 IEEVSLFWKNNTQNAAISIDRMMGYRLISNLAIVRWVFSPENIDQFHASDRPWEVLRNAV 639
+ + W+N+ Q A+ +D+M+ +++ A+ W+FS E F WE+L + +
Sbjct: 587 LRVMFEVWRNHPQMIAVLVDKMIRTQIVDCAAVANWIFSSELSRDF-TRLFVWEILHSTI 645
Query: 640 SKTYNRICDLRKEI 653
K + ++KE+
Sbjct: 646 RKMNKHVLKIQKEL 659
>sp|Q6GQ80|NBP1A_XENLA Nuclear cap-binding protein subunit 1-A OS=Xenopus laevis
GN=ncbp1-a PE=2 SV=1
Length = 791
Score = 288 bits (737), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 211/781 (27%), Positives = 376/781 (48%), Gaps = 120/781 (15%)
Query: 5 KNLLLKIGDNCPEYGNSDDLKDHIETCFGVIRRELEHSSDDVPHYIINCAEQIPHKIPLY 64
++L+ ++G+ ++ L+ ++E GV+ +L + + + A +P K+ +Y
Sbjct: 32 ESLICRVGEK-----STSSLESNLEGLAGVLEADLPNYKSKILRILCFVARLLPEKMSVY 86
Query: 65 GTLVGLLNLENEDFVKKVVETTQRKFQDALDSGNCDRIRILMRFLTVMMCSKILQPGSLV 124
TLVGLLN N +F + VE R ++ + L+RFL+ ++ ++ S+V
Sbjct: 87 STLVGLLNARNYNFGGEFVEAMIRHLKETIKLNAYSEAVYLVRFLSDLVNCHVIAAPSMV 146
Query: 125 VVFETLLSSAATTVDEDKGNPSWQARADFYVTCILSCLPWGGAELIEQVPEEIERVMAGL 184
+FE+ + T +ED Q R+D+YV +LS LPW G EL E+ E++R+++ +
Sbjct: 147 AMFESFV---GVTQEEDIP----QVRSDWYVYAVLSSLPWVGKELYEKKDVEMDRILSQI 199
Query: 185 EAYLSIRRHTSDTGLSFFEEDDESGKGLVEKDFLEDLWHRVQALSSNGWKLDSVPRPHLS 244
EAYL R+ + L + + K ++++L+ LW ++Q L + W+ + RP+L+
Sbjct: 200 EAYLKQRQKLHVSILQVWSAE----KPHPQEEYLDCLWAQIQKLKKDRWQERHILRPYLA 255
Query: 245 FEAQLVSGKSHEFGPISCPEQPDVPTAVSGITHGKQKHDAELKYPQRIRRL--------- 295
F++ L H P + P + D+ P+ + R+
Sbjct: 256 FDSVLCEALQHNLPPFTPPPHTE---------------DSVYPVPRVVFRMFDYTDAPEG 300
Query: 296 NIFPASKSEVDMQPIDRFILEEYLLDVLLFFNGCRKECAFYMVNLP----VPFRYEYLMA 351
+ P S S ++RF++EE L +L RK CA +++ P +P Y +
Sbjct: 301 PVMPGSHS------VERFVIEENLHCILKSHWRERKTCAAQLLSYPEKNKIPLNYH--IV 352
Query: 352 ETIFSQLLLLPQPPFKPIYYTLVIMDLCKALPGAFPAVVAGAVRALFDKIADLDMECRIR 411
E IF +L LP PP + YT ++++LCK PG+ P V+A A L+ ++ ++ C R
Sbjct: 353 EVIFGELFQLPTPPHIDVMYTTLLIELCKLQPGSLPQVLAQASEMLYTRLDTMNTICIDR 412
Query: 412 FILWFSHHLSNFQFIWPWEEWAYVL--DLPKWAPQRVFVQEVLEREVRLSYWDKVKQSIE 469
FI WFSHHLSNFQF W WE+WA L DL K PQ FV+EVLE+ +RLSY ++ ++
Sbjct: 413 FINWFSHHLSNFQFRWNWEDWADCLSQDLNKPKPQ--FVREVLEKCMRLSYHQRI---LD 467
Query: 470 NAPA-LEELLPPKGGPNFKYSMEDGRERSEEHALSAELTNKVKGRQTAREIIVWVEESVY 528
PA L P FKY ++ ++++ LTN++K + + +EI +++
Sbjct: 468 IVPATFSALYPASPSCVFKYG-DESNSALPGYSVAVTLTNEIKNKASDKEIFNILKDIPN 526
Query: 529 P------IHGLG---VTIKVVVQTLLDIGSKSFTHLITVLERYGQVISKICPDHDKQLML 579
P G+ + I+V VQ+LL++ SKSF+H + L ++ + + + +L +
Sbjct: 527 PNQDDDDDEGISFNPLKIEVFVQSLLNLASKSFSHAFSALAKFHDIFKALSESDEGKLHI 586
Query: 580 IEEVSLFWKNNTQNAAISIDRMMGYRLISNLAIVRWVFSPE---NIDQFHASDRPWEVLR 636
+ WKN+ Q A+ +D+M+ +++ A+ W+FSPE + +F+ WE+L
Sbjct: 587 LRVAYDVWKNHPQMIAVLVDKMIRTQIVDCAAVANWIFSPELSHDFTRFYI----WEILH 642
Query: 637 NAVSKTYNRICDLRKEIISLKKGVTLAEEAAAKAKAELEAAESKLSLVDGEPVLGGNPAR 696
+ + K + ++KE+ K+ R
Sbjct: 643 STIRKMNKHVQKIQKELEETKQ-------------------------------------R 665
Query: 697 LSRLKLHAEKAKNEEISAK------ESLEAKEALFARAVEENEALYLSLYRNFSNVLMER 750
L++ H + N+E S + E +E + A E + L+L +++ F +L E
Sbjct: 666 LAKQHKHRDSDDNDEDSGRKDGPLEEQIERLQEKVESAQSEQKNLFLVIFQRFIMILTEH 725
Query: 751 L 751
L
Sbjct: 726 L 726
>sp|Q56A27|NCBP1_RAT Nuclear cap-binding protein subunit 1 OS=Rattus norvegicus GN=Ncbp1
PE=1 SV=1
Length = 790
Score = 288 bits (736), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 212/780 (27%), Positives = 365/780 (46%), Gaps = 103/780 (13%)
Query: 5 KNLLLKIGDNCPEYGNSDDLKDHIETCFGVIRRELEHSSDDVPHYIINCAEQIPHKIPLY 64
++L+ K+G+ ++ L+ ++E GV+ +L + + + A +P K+ +Y
Sbjct: 32 ESLICKVGEK-----SACSLESNLEGLAGVLEADLPNYKSKILRLLCTVARLLPEKLTIY 86
Query: 65 GTLVGLLNLENEDFVKKVVETTQRKFQDALDSGNCDRIRILMRFLTVMMCSKILQPGSLV 124
TLVGLLN N +F + VE R+ +++L + N + L+RFL+ ++ ++ S+V
Sbjct: 87 TTLVGLLNARNYNFGGEFVEAMIRQLKESLKANNYNEAVYLVRFLSDLVNCHVIAAPSMV 146
Query: 125 VVFETLLSSAATTVDEDKGNPSWQARADFYVTCILSCLPWGGAELIEQVPEEIERVMAGL 184
+FE +S T +ED Q R D+YV LS LPW G EL E+ E++R+ +
Sbjct: 147 AMFENFVS---VTQEEDVP----QVRRDWYVYAFLSSLPWVGKELYEKKDAEMDRIFSST 199
Query: 185 EAYLSIRRHTSDTGLSFFEEDDESGKGLVEKDFLEDLWHRVQALSSNGWKLDSVPRPHLS 244
E+YL R+ T L + D K ++++L+ LW ++Q L + W+ + RP+L+
Sbjct: 200 ESYLKRRQKTHVPMLQVWTAD----KPHPQEEYLDCLWAQIQKLKKDRWQERHILRPYLA 255
Query: 245 FEAQLVSGKSHEFGPISCPEQPDVPTAVSGITHGKQKHDAELKYPQRIRRL--------- 295
F++ L H P + P + D+ P+ I R+
Sbjct: 256 FDSILCEALQHNLPPFTPPPHTE---------------DSVYPMPRVIFRMFDYTDDPEG 300
Query: 296 NIFPASKSEVDMQPIDRFILEEYLLDVLLFFNGCRKECAFYMVNLP----VPFRYEYLMA 351
+ P S S ++RF++EE L ++ + RK CA +V+ P +P Y +
Sbjct: 301 PVMPGSHS------VERFVIEENLHCIIKSYWKERKTCAAQLVSYPGKNKIPLNYH--IV 352
Query: 352 ETIFSQLLLLPQPPFKPIYYTLVIMDLCKALPGAFPAVVAGAVRALFDKIADLDMECRIR 411
E IF++L LP PP + YT ++++LCK PG+ P V+A A L+ ++ + C R
Sbjct: 353 EVIFAELFQLPAPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMSTTCVDR 412
Query: 412 FILWFSHHLSNFQFIWPWEEWAYVLDLPKWAPQRVFVQEVLEREVRLSYWDKVKQSIENA 471
FI WFSHHLSNFQF W WE+W+ L +P+ FV+EVLE+ +RLSY + +
Sbjct: 413 FINWFSHHLSNFQFRWSWEDWSDCLTQDLESPKPKFVREVLEKCMRLSYHQHILDIV--P 470
Query: 472 PALEELLPPKGGPNFKYSMEDGRERSEE---HALSAELTNKVKGRQTAREIIVWVEESVY 528
P L P +KY G E S H+++ L+ K + T EI +++
Sbjct: 471 PTFSALCPANPTCIYKY----GDESSNSLPGHSVALCLSVAFKSKATNDEIFSILKDVPN 526
Query: 529 P---------IHGLGVTIKVVVQTLLDIGSKSFTHLITVLERYGQVISKICPDHDKQLML 579
P + I+V VQTLL + +KSF+H + L ++ +V + +L +
Sbjct: 527 PNQVDDDDEGFRFNPLKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDKGKLHV 586
Query: 580 IEEVSLFWKNNTQNAAISIDRMMGYRLISNLAIVRWVFSPENIDQFHASDRPWEVLRNAV 639
+ + W+N+ Q A+ +D+M+ +++ A+ W+FS E F WE+L + +
Sbjct: 587 LRVMFEVWRNHPQMIAVLVDKMIRTQIVDCAAVANWIFSSELSRDF-TRLFVWEILHSTI 645
Query: 640 SKTYNRICDLRKEIISLKKGVTLAEEAAAKAKAELEAAESKLSLVDGEPVLGGNPARLSR 699
K + ++KE+ E A + A S + G ++ R
Sbjct: 646 RKMNKHVLKIQKEL-----------EEAKEKLARQHKRRSDDDDRGSDRKDGALEEQIER 694
Query: 700 LKLHAEKAKNEEISAKESLEAKEALFARAVEENEALYLSLYRNFSNVLMERLPDASRAGT 759
L+ E A++E+ + L+L +++ F +L E L GT
Sbjct: 695 LQEKVESAQSEQ---------------------KNLFLVIFQRFIMILTEHLVRCETDGT 733
>sp|Q3UYV9|NCBP1_MOUSE Nuclear cap-binding protein subunit 1 OS=Mus musculus GN=Ncbp1 PE=1
SV=2
Length = 790
Score = 287 bits (734), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 212/780 (27%), Positives = 365/780 (46%), Gaps = 103/780 (13%)
Query: 5 KNLLLKIGDNCPEYGNSDDLKDHIETCFGVIRRELEHSSDDVPHYIINCAEQIPHKIPLY 64
++L+ K+G+ ++ L+ ++E GV+ +L + + + A +P K+ +Y
Sbjct: 32 ESLICKVGEK-----SACSLESNLEGLAGVLEADLPNYKSKILRLLCTVARLLPEKLTIY 86
Query: 65 GTLVGLLNLENEDFVKKVVETTQRKFQDALDSGNCDRIRILMRFLTVMMCSKILQPGSLV 124
TLVGLLN N +F + VE R+ +++L + N + L+RFL+ ++ ++ S+V
Sbjct: 87 TTLVGLLNARNYNFGGEFVEAMIRQLKESLKANNYNEAVYLVRFLSDLVNCHVIAAPSMV 146
Query: 125 VVFETLLSSAATTVDEDKGNPSWQARADFYVTCILSCLPWGGAELIEQVPEEIERVMAGL 184
+FE +S T +ED Q R D+YV LS LPW G EL E+ E++R+ +
Sbjct: 147 AMFENFVS---VTQEEDVP----QVRRDWYVYAFLSSLPWVGKELYEKKDAEMDRIFSTT 199
Query: 185 EAYLSIRRHTSDTGLSFFEEDDESGKGLVEKDFLEDLWHRVQALSSNGWKLDSVPRPHLS 244
E+YL R+ T L + D K ++++L+ LW ++Q L + W+ + RP+L+
Sbjct: 200 ESYLKRRQKTHVPMLQVWTAD----KPHPQEEYLDCLWAQIQKLKKDRWQERHILRPYLA 255
Query: 245 FEAQLVSGKSHEFGPISCPEQPDVPTAVSGITHGKQKHDAELKYPQRIRRL--------- 295
F++ L H P + P + D+ P+ I R+
Sbjct: 256 FDSILCEALQHNLPPFTPPPHTE---------------DSVYPMPRVIFRMFDYTDDPEG 300
Query: 296 NIFPASKSEVDMQPIDRFILEEYLLDVLLFFNGCRKECAFYMVNLP----VPFRYEYLMA 351
+ P S S ++RF++EE L ++ + RK CA +V+ P +P Y +
Sbjct: 301 PVMPGSHS------VERFVIEENLHCIIKSYWKERKTCAAQLVSYPGKNKIPLNYH--IV 352
Query: 352 ETIFSQLLLLPQPPFKPIYYTLVIMDLCKALPGAFPAVVAGAVRALFDKIADLDMECRIR 411
E IF++L LP PP + YT ++++LCK PG+ P V+A A L+ ++ + C R
Sbjct: 353 EVIFAELFQLPAPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMSTTCVDR 412
Query: 412 FILWFSHHLSNFQFIWPWEEWAYVLDLPKWAPQRVFVQEVLEREVRLSYWDKVKQSIENA 471
FI WFSHHLSNFQF W WE+W+ L +P+ FV+EVLE+ +RLSY + +
Sbjct: 413 FINWFSHHLSNFQFRWSWEDWSDCLTQDLESPKPKFVREVLEKCMRLSYHQHILDIV--P 470
Query: 472 PALEELLPPKGGPNFKYSMEDGRERSEE---HALSAELTNKVKGRQTAREIIVWVEESVY 528
P L P +KY G E S H+++ L+ K + T EI +++
Sbjct: 471 PTFSALCPANPTCIYKY----GDESSNSLPGHSVALCLSVAFKSKATNDEIFSILKDVPN 526
Query: 529 P---------IHGLGVTIKVVVQTLLDIGSKSFTHLITVLERYGQVISKICPDHDKQLML 579
P + I+V VQTLL + +KSF+H + L ++ +V + +L +
Sbjct: 527 PNQVDDDDEGFRFNPLKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDKGKLHV 586
Query: 580 IEEVSLFWKNNTQNAAISIDRMMGYRLISNLAIVRWVFSPENIDQFHASDRPWEVLRNAV 639
+ + W+N+ Q A+ +D+M+ +++ A+ W+FS E F WE+L + +
Sbjct: 587 LRVMFEVWRNHPQMIAVLVDKMIRTQIVDCAAVANWIFSSELSRDF-TRLFVWEILHSTI 645
Query: 640 SKTYNRICDLRKEIISLKKGVTLAEEAAAKAKAELEAAESKLSLVDGEPVLGGNPARLSR 699
K + ++KE+ E A + A S + G ++ R
Sbjct: 646 RKMNKHVLKIQKEL-----------EEAKEKLARQHKRRSDDDDRSSDRKDGALEEQIER 694
Query: 700 LKLHAEKAKNEEISAKESLEAKEALFARAVEENEALYLSLYRNFSNVLMERLPDASRAGT 759
L+ E A++E+ + L+L +++ F +L E L GT
Sbjct: 695 LQEKVEAAQSEQ---------------------KNLFLVIFQRFIMILTEHLVRCETDGT 733
>sp|Q7PX35|NCBP1_ANOGA Nuclear cap-binding protein subunit 1 OS=Anopheles gambiae GN=Cbp80
PE=3 SV=4
Length = 807
Score = 284 bits (727), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 185/682 (27%), Positives = 335/682 (49%), Gaps = 70/682 (10%)
Query: 5 KNLLLKIGDNCPEYGNSDDLKDHIETCFGVIRRELEHSSDDVPHYIINCAEQIPHKIPLY 64
+ L+L++G+N ++ L+ ++E V+ +L + + + +C ++P K +Y
Sbjct: 35 ETLILRVGEN-----STSSLESNLEGLVSVLESDLGNFRSKILRILSDCPIKMPEKCTIY 89
Query: 65 GTLVGLLNLENEDFVKKVVETTQRKFQDALDSGNCDRIRILMRFLTVMMCSKILQPGSLV 124
T+VGL+N +N +F + VE + F+D+L D R +RFL ++ ++ SL+
Sbjct: 90 STMVGLMNAKNYNFGGEFVEYMVKTFKDSLKQCQWDAARYALRFLADLVNCHVISTNSLL 149
Query: 125 VVFETLLSSAATTVDEDKGNPSWQARADFYVTCILSCLPWGGAELIEQVPEEIERVMAGL 184
+ ++++ +A +ED Q R D+YV +LS LPW G EL E+ +E ++ +
Sbjct: 150 QLLDSMVDAA----NEDNVP---QVRRDWYVFAVLSTLPWVGRELYEKKESALENLLVRI 202
Query: 185 EAYLSIRRHTSDTGLSFFEEDDESGKGLVEKDFLEDLWHRVQALSSNGWKLDSVPRPHLS 244
E +L+ R L + D ++++L+ LW +++ L + W +PRP+L+
Sbjct: 203 EVFLNKRTKKHHNALRVWSVDAPHP----QEEYLDCLWAQIRKLRQDNWTEKHIPRPYLA 258
Query: 245 FEAQLVSGKSHEFGPISCPEQPDVPTAVSGITHGKQKHDAELKYPQRIRRL--------- 295
F++ L H I P D E P + R+
Sbjct: 259 FDSVLCEALQHNIPVIHPPPHQD---------------SFEYPMPWVVYRMFDYTDCPPG 303
Query: 296 NIFPASKSEVDMQPIDRFILEEYLLDVLLFFNGCRKECAFYMVNLP----VPFRYEYLMA 351
I P + S I+RF++EE+L ++ RK+CA +++ LP +P EY +
Sbjct: 304 PILPGAHS------IERFLIEEHLHSIIEMHRWERKDCAIHLLMLPYKDKIPL--EYCIV 355
Query: 352 ETIFSQLLLLPQPPFKPIYYTLVIMDLCKALPGAFPAVVAGAVRALFDKIADLDMECRIR 411
E IF++L +P P + I Y ++++LCK P P V+A A LF +I ++ C R
Sbjct: 356 EVIFAELFHMPTPRYLEICYGSILIELCKQQPSKMPQVLAQATEILFMRIDSMNTSCFDR 415
Query: 412 FILWFSHHLSNFQFIWPWEEWAYVLDLPKWAPQRVFVQEVLEREVRLSYWDKVKQSIENA 471
F+ WFS+HLSNFQF W W++W L L P+ F+QEVL + +R SY D+ K+ +
Sbjct: 416 FVNWFSYHLSNFQFRWSWDDWDSCLLLENEHPRPKFIQEVLLKCLRFSYHDRFKEMMPEG 475
Query: 472 PALEELLPPKGGPNFKYSMEDGRERSEEHALSAELTNKVKGRQTAREIIVWVEE------ 525
A +L+P P++KYSME G A + +L ++ + A +++ + +
Sbjct: 476 YA--KLIPKPPVPHYKYSME-GAASLPGTATAHKLVVAIRQKCNAEDVLNELNDLPNSRD 532
Query: 526 ------SVYPIHGLGVTIKVVVQTLLDIGSKSFTHLITVLERYGQVISKICPDHDKQLML 579
+ P + L I V VQTLL++GSKSF+H + ++ V + + Q+ +
Sbjct: 533 ASDTDMAEAPFNPLK--IDVFVQTLLNLGSKSFSHSFAAISKFHAVFKALAETEEAQICI 590
Query: 580 IEEVSLFWKNNTQNAAISIDRMMGYRLISNLAIVRWVFSPENIDQFHASDRPWEVLRNAV 639
+ + W ++ Q + +D+++ +++ A+ WVFS E + +F WE+L +
Sbjct: 591 LHNMFELWVDHQQMMVVIVDKLLKVQIVECSAVATWVFSKEMVGEF-TKMYLWEILHLTI 649
Query: 640 SKTYNRICDLRKEIISLKKGVT 661
K + L +E+ K+ +
Sbjct: 650 KKMNQHVTKLSREMNEAKEKLA 671
>sp|B4JM29|NCBP1_DROGR Nuclear cap-binding protein subunit 1 OS=Drosophila grimshawi
GN=Cbp80 PE=3 SV=1
Length = 800
Score = 283 bits (724), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 198/771 (25%), Positives = 364/771 (47%), Gaps = 80/771 (10%)
Query: 5 KNLLLKIGDNCPEYGNSDDLKDHIETCFGVIRRELEHSSDDVPHYIINCAEQIPHKIPLY 64
++L+L++G+ ++ ++ ++E V+ +L + + +CA ++P K +Y
Sbjct: 35 ESLILRVGER-----STSSVESNLEGLVSVLEADLGTFRLKILRILSDCAVRMPEKCTVY 89
Query: 65 GTLVGLLNLENEDFVKKVVETTQRKFQDALDSGNCDRIRILMRFLTVMMCSKILQPGSLV 124
TLVGLLN +N F + V+ + F+++L D R +RFL ++ ++ SL+
Sbjct: 90 TTLVGLLNAKNYKFGGEFVDHMVKTFKESLKLCRWDAARYSLRFLADLVNCHVISATSLL 149
Query: 125 VVFETLLSSAATTVDEDKGNPSWQARADFYVTCILSCLPWGGAELIEQVPEEIERVMAGL 184
+ +T+ +D + Q R D++V +LS LPW G +L E+ +E ++ +
Sbjct: 150 QLLDTM-------IDVSNEDTVPQVRRDWFVFAVLSTLPWVGRDLYEKKESSLESLLLRI 202
Query: 185 EAYLSIRRHTSDTGLSFFEEDDESGKGLVEKDFLEDLWHRVQALSSNGWKLDSVPRPHLS 244
E YL+ R L + D ++++L+ LW +++ L + W +PRP+L
Sbjct: 203 EVYLNKRSKKHHNALRVWTSDAPHP----QEEYLDCLWAQIRKLRQDNWAEKHIPRPYLV 258
Query: 245 FEAQLVSGKSHEFGPISCPEQPDVPTAVSGITHGKQKHDAELKYPQRIRRLNIF---PAS 301
F++ L H I+ P D + E P + R+ + P
Sbjct: 259 FDSILCEALQHNLPQITPPPHHD---------------NFEYPMPWVVYRMFDYTDCPDG 303
Query: 302 KSEVDMQPIDRFILEEYLLDVLLFFNGCRKECAFYMVNLPVPFR--YEYLMAETIFSQLL 359
+ I+RF++EE+L ++ + RK+CA ++N P + EY + E IF++L
Sbjct: 304 PNLPGAHSIERFLIEEHLHHIIETHHRERKDCAAQLLNFPFKHKIPLEYCIVEVIFAELF 363
Query: 360 LLPQPPFKPIYYTLVIMDLCKALPGAFPAVVAGAVRALFDKIADLDMECRIRFILWFSHH 419
+P P + I Y ++++LCK PG P V+A A LF +I ++ C RF+ WFS+H
Sbjct: 364 HMPTPRYLDICYGSILIELCKLQPGTLPQVLAQATEILFMRIDSMNTSCFDRFVNWFSYH 423
Query: 420 LSNFQFIWPWEEWAYVLDLPKWAPQRVFVQEVLEREVRLSYWDKVKQSIENAPALEELLP 479
LSNF+F W W+EW L L P+ F+QEVL + +RLSY ++ + + A +L+P
Sbjct: 424 LSNFKFTWSWDEWDSCLLLDAEHPRPKFIQEVLLKCLRLSYHQRITEMMPTTYA--KLIP 481
Query: 480 PKGGPNFKYSMEDGRERSEEHALSAELTNKVKGRQTAREIIVWVEESVYPIHGL------ 533
PN+KY+ E+ ++ +L ++ + T E++ ++E P G
Sbjct: 482 VTPVPNYKYTSEEAANLPGT-TVALQLVGAIRQKCTPEEVVNILKE--IPSSGYSGEEMS 538
Query: 534 -----GVTIKVVVQTLLDIGSKSFTHLITVLERYGQVISKICPDHDKQLMLIEEVSLFWK 588
+ I V VQTLL++GSKSF+H + ++ V + + Q+ ++ + W
Sbjct: 539 DGSFNALKIDVFVQTLLNLGSKSFSHSFAAISKFHVVFRALAETEEAQICILHNIFELWS 598
Query: 589 NNTQNAAISIDRMMGYRLISNLAIVRWVFSPENIDQFHASDRPWEVLRNAVSKTYNRICD 648
++ Q + ID+++ +++ A+ W+FS E +F WE+L + K
Sbjct: 599 SHQQMMVVLIDKLLKLQIVDCSAVATWIFSKEMTGEF-TKMYLWEILHLTIKK------- 650
Query: 649 LRKEIISLKKGVTLAEEAAAKAKAELEAAESKLSLVDGEPVLGGNPARLSRLKLHAEKAK 708
+ K +I L ++ A+E +KA + + +P+ HA+K
Sbjct: 651 MNKHVIKLNVELSDAKEKLSKADSSSSDTDEDTPHKRKKPI------------THADKPS 698
Query: 709 NEEIS-AKESLEAKEALFARAVEENEALYLSLYRNFSNVLMERLPDASRAG 758
E + +E LEA + L+L +++ F +L E L + G
Sbjct: 699 EEVVERMEEKLEAANV-------NQKRLFLIVFQRFIMILSEHLLRSDTDG 742
>sp|B3NU52|NCBP1_DROER Nuclear cap-binding protein subunit 1 OS=Drosophila erecta GN=Cbp80
PE=3 SV=1
Length = 800
Score = 283 bits (723), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 198/771 (25%), Positives = 367/771 (47%), Gaps = 80/771 (10%)
Query: 5 KNLLLKIGDNCPEYGNSDDLKDHIETCFGVIRRELEHSSDDVPHYIINCAEQIPHKIPLY 64
++L+L++G+ ++ ++ ++E V+ +L + + +CA ++P K +Y
Sbjct: 35 ESLILRVGER-----STSSVESNLEGLVSVLEADLGTFRLKILRILSDCAVRMPEKCTVY 89
Query: 65 GTLVGLLNLENEDFVKKVVETTQRKFQDALDSGNCDRIRILMRFLTVMMCSKILQPGSLV 124
TLVGLLN +N F + V+ + F+++L D R +RFL ++ ++ SL+
Sbjct: 90 TTLVGLLNAKNYKFGGEFVDHMVKTFKESLKMCRWDAARYSLRFLADLVNCHVISATSLL 149
Query: 125 VVFETLLSSAATTVDEDKGNPSWQARADFYVTCILSCLPWGGAELIEQVPEEIERVMAGL 184
+ +T+ +D + Q R D++V +LS LPW G +L E+ +E ++ +
Sbjct: 150 QLLDTM-------IDVSNEDTVPQVRRDWFVFAVLSTLPWVGRDLYEKKESALESLLLRI 202
Query: 185 EAYLSIRRHTSDTGLSFFEEDDESGKGLVEKDFLEDLWHRVQALSSNGWKLDSVPRPHLS 244
E YL+ R L + D ++++L+ LW +++ L + W +PRP+L
Sbjct: 203 EVYLNKRSKKHHNALRVWSSDAPHP----QEEYLDCLWAQIRKLRQDNWAEKHIPRPYLV 258
Query: 245 FEAQLVSGKSHEFGPISCPEQPDVPTAVSGITHGKQKHDAELKYPQRIRRLNIF---PAS 301
F++ L H I P D + E P + R+ + P
Sbjct: 259 FDSILCEALQHNLPAIVPPPHHD---------------NFEYPMPWVVYRMFDYTDCPDG 303
Query: 302 KSEVDMQPIDRFILEEYLLDVLLFFNGCRKECAFYMVNLPVPFR--YEYLMAETIFSQLL 359
+ I+RF++EE+L ++ ++ RK+CA +++ P + EY + E IF++L
Sbjct: 304 PNLPGAHSIERFLIEEHLHHIIETYHHERKDCAAQLLSFPFKHKIPLEYCIVEVIFAELF 363
Query: 360 LLPQPPFKPIYYTLVIMDLCKALPGAFPAVVAGAVRALFDKIADLDMECRIRFILWFSHH 419
+P P + I Y ++++LCK P P V+A A LF +I ++ C RF+ WFS+H
Sbjct: 364 HMPTPRYLDICYGSILIELCKLQPATLPQVLAQATEILFMRIDSMNTSCFDRFVNWFSYH 423
Query: 420 LSNFQFIWPWEEWAYVLDLPKWAPQRVFVQEVLEREVRLSYWDKVKQSIENAPALEELLP 479
LSNF+F W W+EW L L P+ F+QEVL++ +RLSY ++ + + A +L+P
Sbjct: 424 LSNFKFTWSWDEWDSCLLLDGEHPRPKFIQEVLQKCLRLSYHQRITEMMPTTYA--KLIP 481
Query: 480 PKGGPNFKYSMEDGRERSEEHALSAELTNKVKGRQTAREIIVWVEESVYPIHGL------ 533
PN+KY+ E+ A++ +L ++ + T E++ +++ P G
Sbjct: 482 LTPVPNYKYANEEAANLPGT-AVAHQLVVAIRQKCTPEEVVTILKD--IPSSGYSGEEMS 538
Query: 534 -----GVTIKVVVQTLLDIGSKSFTHLITVLERYGQVISKICPDHDKQLMLIEEVSLFWK 588
+ I V VQTLL++GSKSF+H + ++ V + + Q+ ++ + W
Sbjct: 539 DGSFNALKIDVFVQTLLNLGSKSFSHSFAAISKFHSVFRALAETEEAQICILHNIYELWS 598
Query: 589 NNTQNAAISIDRMMGYRLISNLAIVRWVFSPENIDQFHASDRPWEVLRNAVSKTYNRICD 648
++ Q + ID+++ +++ A+ W+FS E +F WE+L + K
Sbjct: 599 SHQQMMVVLIDKLLKLQIVDCSAVATWIFSKEMTGEF-TKMYLWEILHLTIKK------- 650
Query: 649 LRKEIISLKKGVTLAEEAAAKAKAELEAAESKLSLVDGEPVLGGNPARLSRLKLHAEKAK 708
+ K +I L ++ A++ AKA + +E S +P+ HA+K
Sbjct: 651 MNKHVIKLNSELSEAKDKLAKADSSSSDSEDDSSHKRKKPI------------THADKPS 698
Query: 709 NEEIS-AKESLEAKEALFARAVEENEALYLSLYRNFSNVLMERLPDASRAG 758
E + +E LEA + L+L +++ F +L E L + G
Sbjct: 699 EEVVERMEEKLEAANV-------NQKRLFLIVFQRFIMILSEHLLRSDTDG 742
>sp|B4NC41|NCBP1_DROWI Nuclear cap-binding protein subunit 1 OS=Drosophila willistoni
GN=Cbp80 PE=3 SV=1
Length = 800
Score = 281 bits (720), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 199/772 (25%), Positives = 366/772 (47%), Gaps = 82/772 (10%)
Query: 5 KNLLLKIGDNCPEYGNSDDLKDHIETCFGVIRRELEHSSDDVPHYIINCAEQIPHKIPLY 64
++L+L++G+ ++ ++ ++E V+ +L + + +CA ++P K +Y
Sbjct: 35 ESLILRVGER-----STSSVESNLEGLVSVLEADLGTFRLKILRILSDCAVRMPEKCTVY 89
Query: 65 GTLVGLLNLENEDFVKKVVETTQRKFQDALDSGNCDRIRILMRFLTVMMCSKILQPGSLV 124
TLVGLLN +N F + V+ + F+++L D R +RFL ++ ++ SL+
Sbjct: 90 TTLVGLLNAKNYKFGGEFVDHMVKTFKESLKLCRWDAARYSLRFLADLVNCHVISATSLL 149
Query: 125 VVFETLLSSAATTVDEDKGNPSWQARADFYVTCILSCLPWGGAELIEQVPEEIERVMAGL 184
+ +T+ +D + Q R D++V +LS LPW G +L E+ +E ++ +
Sbjct: 150 QLLDTM-------IDVSNEDTVPQVRRDWFVFAVLSTLPWVGRDLYEKKESALESLLLRI 202
Query: 185 EAYLSIRRHTSDTGLSFFEEDDESGKGLVEKDFLEDLWHRVQALSSNGWKLDSVPRPHLS 244
E YL+ R L + D ++++L+ LW +++ L + W +PRP+L
Sbjct: 203 EVYLNKRSKKHHNALRVWSSDAPHP----QEEYLDCLWAQIRKLRQDNWAEKHIPRPYLV 258
Query: 245 FEAQLVSGKSHEFGPISCPEQPDVPTAVSGITHGKQKHDA-ELKYPQRIRRLNIF---PA 300
F++ L H I P HDA E P + R+ + P
Sbjct: 259 FDSILCEALQHNLPQIIPPPH----------------HDAFEYPMPWVVYRMFDYTDCPD 302
Query: 301 SKSEVDMQPIDRFILEEYLLDVLLFFNGCRKECAFYMVNLPVPFR--YEYLMAETIFSQL 358
+ I+RF++EE+L ++ + RK+CA ++N P + EY + E IF++L
Sbjct: 303 GPNLPGAHSIERFLIEEHLHHIIETHHYERKDCAAQLLNFPFKHKIPLEYCIVEVIFAEL 362
Query: 359 LLLPQPPFKPIYYTLVIMDLCKALPGAFPAVVAGAVRALFDKIADLDMECRIRFILWFSH 418
+P P + I Y ++++LCK PG P V+A A LF +I ++ C RF+ WFS+
Sbjct: 363 FHMPTPRYLDICYGSILIELCKLQPGTLPQVLAQATEILFMRIDSMNTSCFDRFVNWFSY 422
Query: 419 HLSNFQFIWPWEEWAYVLDLPKWAPQRVFVQEVLEREVRLSYWDKVKQSIENAPALEELL 478
HLSNF+F W W+EW L L P+ F+QEVL++ +RLSY ++ + + A +L+
Sbjct: 423 HLSNFKFTWSWDEWDSCLLLEAEHPRPKFIQEVLQKCLRLSYHQRITEMMPTTYA--KLI 480
Query: 479 PPKGGPNFKYSMEDGRERSEEHALSAELTNKVKGRQTAREIIVWVEESVYPIHGL----- 533
P PN+KY+ E+ ++ +L ++ + T E++ ++E P G
Sbjct: 481 PLTPVPNYKYANEEAANLPGT-TVAHQLVVAIRQKCTPEEVVNILKE--IPSSGYSGEEM 537
Query: 534 ------GVTIKVVVQTLLDIGSKSFTHLITVLERYGQVISKICPDHDKQLMLIEEVSLFW 587
+ I V VQTLL++GSKSF+H + ++ V + + Q+ ++ + W
Sbjct: 538 SDGSFNALKIDVFVQTLLNLGSKSFSHSFAAISKFHAVFRALAETEEAQICILHNIFELW 597
Query: 588 KNNTQNAAISIDRMMGYRLISNLAIVRWVFSPENIDQFHASDRPWEVLRNAVSKTYNRIC 647
++ Q + ID+++ +++ A+ W+FS E +F WE+L + K
Sbjct: 598 SSHQQMMVVLIDKLLKLQIVDCSAVATWIFSKEMTGEF-TKMYLWEILHLTIKK------ 650
Query: 648 DLRKEIISLKKGVTLAEEAAAKAKAELEAAESKLSLVDGEPVLGGNPARLSRLKLHAEKA 707
+ K +I L ++ A++ +KA + ++ P + + HA+K
Sbjct: 651 -MNKHVIKLNTELSDAKDKLSKADSSSSDSDE------------DTPHKRKKPITHADKP 697
Query: 708 KNEEIS-AKESLEAKEALFARAVEENEALYLSLYRNFSNVLMERLPDASRAG 758
E + +E LEA + L+L +++ F +L E L + G
Sbjct: 698 SEEVVERMEEKLEAANV-------NQKRLFLIVFQRFIMILSEHLLRSDTDG 742
>sp|Q5ZJZ6|NCBP1_CHICK Nuclear cap-binding protein subunit 1 OS=Gallus gallus GN=NCBP1
PE=2 SV=1
Length = 793
Score = 281 bits (720), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 194/672 (28%), Positives = 333/672 (49%), Gaps = 67/672 (9%)
Query: 5 KNLLLKIGDNCPEYGNSDDLKDHIETCFGVIRRELEHSSDDVPHYIINCAEQIPHKIPLY 64
++L+ ++G+ ++ L+ ++E GV+ +L + + + A +P K+ +Y
Sbjct: 34 ESLICRVGEK-----SNSSLESNLEGLAGVLEADLPNYKSKILRILCTVARLLPEKLTVY 88
Query: 65 GTLVGLLNLENEDFVKKVVETTQRKFQDALDSGNCDRIRILMRFLTVMMCSKILQPGSLV 124
TLVGLLN N +F + VE R+ ++ L + L+RFL+ ++ ++ S+V
Sbjct: 89 TTLVGLLNARNYNFGGEFVEAMIRQLKECLKVNMYNEAVHLVRFLSDLVNCHVIAAPSMV 148
Query: 125 VVFETLLSSAATTVDEDKGNPSWQARADFYVTCILSCLPWGGAELIEQVPEEIERVMAGL 184
+FE +S T +ED Q R D+Y+ LS LPW G EL E+ E++R+++
Sbjct: 149 AMFENFVS---VTQEEDVP----QVRCDWYIFAFLSSLPWVGKELYEKKDAEMDRLLSQT 201
Query: 185 EAYLSIRRHTSDTGLSFFEEDDESGKGLVEKDFLEDLWHRVQALSSNGWKLDSVPRPHLS 244
E+YL R+ L + D K ++++L+ LW ++Q L + W+ + RP+L+
Sbjct: 202 ESYLKRRQKIHVPMLQVWTAD----KPHPQEEYLDCLWSQIQKLKKDRWQERHILRPYLA 257
Query: 245 FEAQLVSGKSHEFGPISCPEQPDVPTAVSGITHGKQKHDAELKYPQRIRRL--------- 295
F++ L H P + P + D+ P+ I R+
Sbjct: 258 FDSILCEALQHNLPPFTPPPHTE---------------DSVYPMPRVIFRMFDYTDDPEG 302
Query: 296 NIFPASKSEVDMQPIDRFILEEYLLDVLLFFNGCRKECAFYMVNLP----VPFRYEYLMA 351
+ P S S ++RF++EE L ++ RK CA +++ P +P Y +
Sbjct: 303 PVMPGSHS------VERFVIEENLHCIIKSHWKERKTCAAQLLSYPGNNKIPLNYH--IV 354
Query: 352 ETIFSQLLLLPQPPFKPIYYTLVIMDLCKALPGAFPAVVAGAVRALFDKIADLDMECRIR 411
E IF++L LP PP + YT ++++LCK PG+ P V+A A L+ ++ ++ C R
Sbjct: 355 EVIFAELFQLPSPPHIEVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDR 414
Query: 412 FILWFSHHLSNFQFIWPWEEWAYVLDLPKWAPQRVFVQEVLEREVRLSYWDKVKQSIENA 471
FI WFSHHLSNFQF W WE+W+ L P+ FV+EVLE+ +RLSY ++ I+
Sbjct: 415 FINWFSHHLSNFQFRWSWEDWSDCLTQDLEKPKPKFVREVLEKCMRLSYHQRI---IDIV 471
Query: 472 PALEELLPPKGGPNFKYSMEDGRERS-EEHALSAELTNKVKGRQTAREIIVWVEESVYPI 530
PA +L P P Y D RS + ++ LT +K + + EI +++ P
Sbjct: 472 PASFSVLSP-ANPVCIYKYGDESNRSLPGYTVALCLTIAIKNKASNDEIFSILKDVPNPN 530
Query: 531 HGL----GVT-----IKVVVQTLLDIGSKSFTHLITVLERYGQVISKICPDHDKQLMLIE 581
G T I+V VQTLL + +KSF+H + L ++ +V + + +L ++
Sbjct: 531 QDDDDDEGFTFNPLKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLR 590
Query: 582 EVSLFWKNNTQNAAISIDRMMGYRLISNLAIVRWVFSPENIDQFHASDRPWEVLRNAVSK 641
V WKN+ Q A+ +D+M+ +++ A+ W+FS E F WE+L + + K
Sbjct: 591 VVYEVWKNHPQMIAVLVDKMIRTQIVDCAAVANWIFSSELAHDF-TRFYIWEILHSTIRK 649
Query: 642 TYNRICDLRKEI 653
+ + KE+
Sbjct: 650 MNKHVLKIHKEL 661
>sp|B4L2J8|NCBP1_DROMO Nuclear cap-binding protein subunit 1 OS=Drosophila mojavensis
GN=Cbp80 PE=3 SV=1
Length = 800
Score = 281 bits (720), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 199/773 (25%), Positives = 364/773 (47%), Gaps = 84/773 (10%)
Query: 5 KNLLLKIGDNCPEYGNSDDLKDHIETCFGVIRRELEHSSDDVPHYIINCAEQIPHKIPLY 64
++L+L++G+ ++ ++ ++E V+ +L + + +CA ++P K +Y
Sbjct: 35 ESLILRVGER-----STSSVESNLEGLVSVLEADLGTFRLKILRILSDCAVRMPEKCTVY 89
Query: 65 GTLVGLLNLENEDFVKKVVETTQRKFQDALDSGNCDRIRILMRFLTVMMCSKILQPGSLV 124
TLVGLLN +N F + V+ + F+++L D R +RFL ++ ++ SL+
Sbjct: 90 TTLVGLLNAKNYKFGGEFVDHMVKTFKESLKLCRWDAARYSLRFLADLVNCHVISATSLL 149
Query: 125 VVFETLLSSAATTVDEDKGNPSWQARADFYVTCILSCLPWGGAELIEQVPEEIERVMAGL 184
+ +T+ +D + Q R D++V +LS LPW G +L E+ +E ++ +
Sbjct: 150 QLLDTM-------IDVSNEDTVPQVRRDWFVFAVLSTLPWVGRDLYEKKESALESLLLRI 202
Query: 185 EAYLSIRRHTSDTGLSFFEEDDESGKGLVEKDFLEDLWHRVQALSSNGWKLDSVPRPHLS 244
E YL+ R L + D ++++L+ LW +++ L + W +PRP+L
Sbjct: 203 EVYLNKRSKKHHNALRVWSSDAPHP----QEEYLDCLWAQIRKLRQDNWAEKHIPRPYLV 258
Query: 245 FEAQLVSGKSHEFGPISCPEQPDVPTAVSGITHGKQKHDAELKYPQ-----RIRRLNIFP 299
F++ L H I+ P H A +YP R+ P
Sbjct: 259 FDSILCEALQHNLPQITPP-----------------PHHASFEYPMPWVVYRMFDYTDCP 301
Query: 300 ASKSEVDMQPIDRFILEEYLLDVLLFFNGCRKECAFYMVNLPVPFR--YEYLMAETIFSQ 357
+ I+RF++EE+L ++ + RK+CA ++N P + EY + E IF++
Sbjct: 302 DGPNLPGAHSIERFLIEEHLHHIIETHHHERKDCAAQLLNFPFKHKIPLEYCIVEVIFAE 361
Query: 358 LLLLPQPPFKPIYYTLVIMDLCKALPGAFPAVVAGAVRALFDKIADLDMECRIRFILWFS 417
L +P P + I Y ++++LCK PG P V+A A LF +I ++ C RF+ WFS
Sbjct: 362 LFHMPTPRYLDICYGSILIELCKLQPGTLPQVLAQATEILFMRIDSMNTSCFDRFVNWFS 421
Query: 418 HHLSNFQFIWPWEEWAYVLDLPKWAPQRVFVQEVLEREVRLSYWDKVKQSIENAPALEEL 477
+HLSNF+F W W+EW L L P+ F+QEVL++ +RLSY ++ + + A +L
Sbjct: 422 YHLSNFKFTWSWDEWDSCLLLDAEHPRPKFIQEVLQKCLRLSYHQRITEMMPTTYA--KL 479
Query: 478 LPPKGGPNFKYSMEDGRERSEEHALSAELTNKVKGRQTAREIIVWVEESVYPIHGL---- 533
+P PN+KY+ E+ ++ +L ++ + T E++ ++E P G
Sbjct: 480 IPAPPVPNYKYTNEEAANLPGI-TVALQLVGAIRQKCTPEEVVNILKE--IPNTGYSGEE 536
Query: 534 -------GVTIKVVVQTLLDIGSKSFTHLITVLERYGQVISKICPDHDKQLMLIEEVSLF 586
+ I V VQTLL++GSKSF+H + ++ V + + Q+ ++ +
Sbjct: 537 MSDGSFNALKIDVFVQTLLNLGSKSFSHSFAAISKFHAVFRALAETEEAQICILHNIFEL 596
Query: 587 WKNNTQNAAISIDRMMGYRLISNLAIVRWVFSPENIDQFHASDRPWEVLRNAVSKTYNRI 646
W ++ Q + ID+++ +++ A+ W+FS E +F WE+L + K
Sbjct: 597 WSSHQQMMVVLIDKLLKLQIVDCSAVATWIFSKEMTGEF-TKMYLWEILHLTIKK----- 650
Query: 647 CDLRKEIISLKKGVTLAEEAAAKAKAELEAAESKLSLVDGEPVLGGNPARLSRLKLHAEK 706
+ K +I L ++ A+E +KA + + +P+ HA+K
Sbjct: 651 --MNKHVIKLNTELSEAKEKLSKADSSSSDTDEDTPHKRKKPI------------THADK 696
Query: 707 AKNEEIS-AKESLEAKEALFARAVEENEALYLSLYRNFSNVLMERLPDASRAG 758
E + +E LEA + L+L +++ F +L E L + G
Sbjct: 697 PSEEVVERMEEKLEAANV-------NQKRLFLIVFQRFIMILSEHLLRSDTDG 742
>sp|B3MS75|NCBP1_DROAN Nuclear cap-binding protein subunit 1 OS=Drosophila ananassae
GN=Cbp80 PE=3 SV=1
Length = 800
Score = 281 bits (718), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 196/772 (25%), Positives = 364/772 (47%), Gaps = 82/772 (10%)
Query: 5 KNLLLKIGDNCPEYGNSDDLKDHIETCFGVIRRELEHSSDDVPHYIINCAEQIPHKIPLY 64
++L+L++G+ ++ ++ ++E V+ +L + + +CA ++P K +Y
Sbjct: 35 ESLILRVGER-----STSSVESNLEGLVSVLEADLGTFRLKILRILSDCAVRMPEKCTVY 89
Query: 65 GTLVGLLNLENEDFVKKVVETTQRKFQDALDSGNCDRIRILMRFLTVMMCSKILQPGSLV 124
TLVGLLN +N F + V+ + F+++L D R +RFL ++ ++ SL+
Sbjct: 90 TTLVGLLNAKNYKFGGEFVDHMVKTFKESLKLCRWDAARYSLRFLADLVNCHVISATSLL 149
Query: 125 VVFETLLSSAATTVDEDKGNPSWQARADFYVTCILSCLPWGGAELIEQVPEEIERVMAGL 184
+ +T+ +D + Q R D++V +LS LPW G +L E+ +E ++ +
Sbjct: 150 QLLDTM-------IDVSNEDTVPQVRRDWFVFAVLSTLPWVGRDLYEKKESALESLLLRI 202
Query: 185 EAYLSIRRHTSDTGLSFFEEDDESGKGLVEKDFLEDLWHRVQALSSNGWKLDSVPRPHLS 244
E YL+ R L + D ++++L+ LW +++ L + W +PRP+L
Sbjct: 203 EVYLNKRSKKHHNALRVWSSDAPHP----QEEYLDCLWAQIRKLRQDNWAEKHIPRPYLV 258
Query: 245 FEAQLVSGKSHEFGPISCPEQPDVPTAVSGITHGKQKHDA-ELKYPQRIRRLNIF---PA 300
F++ L H I P HDA E P + R+ + P
Sbjct: 259 FDSILCEALQHNLPQIVPPSH----------------HDAFEYPMPWVVYRMFDYTDCPD 302
Query: 301 SKSEVDMQPIDRFILEEYLLDVLLFFNGCRKECAFYMVNLPVPFR--YEYLMAETIFSQL 358
+ I+RF++EE+L ++ ++ RK+CA +++ P + EY + E IF++L
Sbjct: 303 GPNLPGAHSIERFLIEEHLHHIIETYHHERKDCAAQLLSFPFKHKIPLEYCIVEVIFAEL 362
Query: 359 LLLPQPPFKPIYYTLVIMDLCKALPGAFPAVVAGAVRALFDKIADLDMECRIRFILWFSH 418
+P P + I Y ++++LCK P P V+A A LF +I ++ C RF+ WFS+
Sbjct: 363 FHMPTPRYLDICYGSILIELCKLQPATLPQVLAQATEILFMRIDSMNTSCFDRFVNWFSY 422
Query: 419 HLSNFQFIWPWEEWAYVLDLPKWAPQRVFVQEVLEREVRLSYWDKVKQSIENAPALEELL 478
HLSNF+F W W+EW L L P+ F+QEVL++ +RLSY ++ + + +L+
Sbjct: 423 HLSNFKFTWSWDEWDSCLLLDAEHPRPKFIQEVLQKCLRLSYHQRITEMMPTTYL--KLI 480
Query: 479 PPKGGPNFKYSMEDGRERSEEHALSAELTNKVKGRQTAREIIVWVEESVYPIHGL----- 533
PP PN+KY+ E+ ++ +L ++ + E++ ++E P G
Sbjct: 481 PPTPSPNYKYANEEAANLPGT-TVAHQLVVAIRQKCLPEEVVNILKE--IPSSGYSGEEM 537
Query: 534 ------GVTIKVVVQTLLDIGSKSFTHLITVLERYGQVISKICPDHDKQLMLIEEVSLFW 587
+ I V VQTLL++GSKSF+H + ++ V + + Q+ ++ + W
Sbjct: 538 SDGSFNALKIDVFVQTLLNLGSKSFSHSFAAISKFHSVFRALAETEEAQICILHNIFELW 597
Query: 588 KNNTQNAAISIDRMMGYRLISNLAIVRWVFSPENIDQFHASDRPWEVLRNAVSKTYNRIC 647
+ Q + ID+++ +++ A+ W+FS E +F WE+L + K
Sbjct: 598 STHQQMMVVLIDKLLKLQIVDCSAVATWIFSKEMTGEF-TKMYLWEILHLTIKK------ 650
Query: 648 DLRKEIISLKKGVTLAEEAAAKAKAELEAAESKLSLVDGEPVLGGNPARLSRLKLHAEKA 707
+ K +I L ++ A++ +KA + ++ P + + HA+K
Sbjct: 651 -MNKHVIKLNTELSEAKDKLSKADSSSSDSDDD------------TPHKRKKPITHADKP 697
Query: 708 KNEEIS-AKESLEAKEALFARAVEENEALYLSLYRNFSNVLMERLPDASRAG 758
E + +E LEA + L+L +++ F +L E L + G
Sbjct: 698 SEEVVERMEEKLEAANV-------NQKRLFLIVFQRFIMILSEHLLRSDTDG 742
>sp|Q29G82|NCBP1_DROPS Nuclear cap-binding protein subunit 1 OS=Drosophila pseudoobscura
pseudoobscura GN=Cbp80 PE=3 SV=1
Length = 800
Score = 280 bits (717), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 193/773 (24%), Positives = 364/773 (47%), Gaps = 84/773 (10%)
Query: 5 KNLLLKIGDNCPEYGNSDDLKDHIETCFGVIRRELEHSSDDVPHYIINCAEQIPHKIPLY 64
++L+L++G+ ++ ++ ++E V+ +L + + +CA ++P K +Y
Sbjct: 35 ESLILRVGER-----STSSVESNLEGLVSVLEADLGTFRLKILRILSDCAVRMPEKCTVY 89
Query: 65 GTLVGLLNLENEDFVKKVVETTQRKFQDALDSGNCDRIRILMRFLTVMMCSKILQPGSLV 124
TLVGLLN +N F + V+ + F+++L D R +RFL ++ ++ SL+
Sbjct: 90 TTLVGLLNAKNYKFGGEFVDHMVKTFKESLKMCRWDAARYSLRFLADLVNCHVISATSLL 149
Query: 125 VVFETLLSSAATTVDEDKGNPSWQARADFYVTCILSCLPWGGAELIEQVPEEIERVMAGL 184
+ +T+ +D + Q R D++V +LS LPW G +L E+ +E ++ +
Sbjct: 150 QLLDTM-------IDVSNEDTVPQVRRDWFVFAVLSTLPWVGRDLYEKKESALESLLLRI 202
Query: 185 EAYLSIRRHTSDTGLSFFEEDDESGKGLVEKDFLEDLWHRVQALSSNGWKLDSVPRPHLS 244
E YL+ R L + D ++++L+ LW +++ L + W +PRP+L+
Sbjct: 203 EVYLNKRSKKHHNALRVWSSDAPHP----QEEYLDCLWAQIRKLRQDNWAEKHIPRPYLT 258
Query: 245 FEAQLVSGKSHEFGPISCPEQPDVPTAVSGITHGKQKHDAELKYPQ-----RIRRLNIFP 299
F+ L H I P H+ YP R+ P
Sbjct: 259 FDTILCEALQHNLPQIIPP-----------------PHNDAFVYPMPWVVYRMFDYTDCP 301
Query: 300 ASKSEVDMQPIDRFILEEYLLDVLLFFNGCRKECAFYMVNLPVPFR--YEYLMAETIFSQ 357
+ I+RF++EE+L ++ ++ RK+CA +++ P + EY + E IF++
Sbjct: 302 DGPNLPGAHSIERFLIEEHLHHIIETYHHERKDCAAQLLSFPFKHKIPLEYCIVEVIFAE 361
Query: 358 LLLLPQPPFKPIYYTLVIMDLCKALPGAFPAVVAGAVRALFDKIADLDMECRIRFILWFS 417
L +P P + I Y ++++LCK P P V+A A LF +I ++ C RF+ WFS
Sbjct: 362 LFHMPTPRYLDICYGSILIELCKLQPATLPQVLAQATEILFMRIDSMNTSCFDRFVNWFS 421
Query: 418 HHLSNFQFIWPWEEWAYVLDLPKWAPQRVFVQEVLEREVRLSYWDKVKQSIENAPALEEL 477
+HLSNF+F W W+EW L L P+ F+QEVL++ +RLSY ++ + + +L
Sbjct: 422 YHLSNFKFTWSWDEWDSCLLLDGEHPRPKFIQEVLQKCLRLSYHQRITEMMPTTYG--KL 479
Query: 478 LPPKGGPNFKYSMEDGRERSEEHALSAELTNKVKGRQTAREIIVWVEESVYPIHGL---- 533
+P PNFKY+ E+ A++ +L ++ + + E++ ++E P G
Sbjct: 480 IPQVPVPNFKYASEEAASLPGT-AVAHQLVVAIRQKCSPEEVVNILKE--IPNSGYSGEE 536
Query: 534 -------GVTIKVVVQTLLDIGSKSFTHLITVLERYGQVISKICPDHDKQLMLIEEVSLF 586
+ I V VQTLL++GSKSF+H + ++ V + + Q+ ++ +
Sbjct: 537 MSDGTFNALKIDVFVQTLLNLGSKSFSHSFAAISKFHSVFRALAETEEAQICVLHNIYEL 596
Query: 587 WKNNTQNAAISIDRMMGYRLISNLAIVRWVFSPENIDQFHASDRPWEVLRNAVSKTYNRI 646
W ++ Q + +D+++ +++ A+ W+FS E +F WE+L + K
Sbjct: 597 WSSHQQMMVVLVDKLLKLQIVDCSAVATWIFSKEMTSEF-TKMYLWEILHLTIKK----- 650
Query: 647 CDLRKEIISLKKGVTLAEEAAAKAKAELEAAESKLSLVDGEPVLGGNPARLSRLKLHAEK 706
+ K +I L +++A++ +KA + ++ +P+ HA+K
Sbjct: 651 --MNKHVIKLNTELSVAKDKLSKADSSSSESDEDAPTKRKKPI------------THADK 696
Query: 707 AKNEEIS-AKESLEAKEALFARAVEENEALYLSLYRNFSNVLMERLPDASRAG 758
E + +E LEA + L+L +++ F +L E + + G
Sbjct: 697 PSEEAVERMEEKLEAANV-------NQKRLFLIVFQRFIMILSEHMLRSDTDG 742
>sp|B4GW22|NCBP1_DROPE Nuclear cap-binding protein subunit 1 OS=Drosophila persimilis
GN=Cbp80 PE=3 SV=1
Length = 800
Score = 280 bits (717), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 193/773 (24%), Positives = 364/773 (47%), Gaps = 84/773 (10%)
Query: 5 KNLLLKIGDNCPEYGNSDDLKDHIETCFGVIRRELEHSSDDVPHYIINCAEQIPHKIPLY 64
++L+L++G+ ++ ++ ++E V+ +L + + +CA ++P K +Y
Sbjct: 35 ESLILRVGER-----STSSVESNLEGLVSVLEADLGTFRLKILRILSDCAVRMPEKCTVY 89
Query: 65 GTLVGLLNLENEDFVKKVVETTQRKFQDALDSGNCDRIRILMRFLTVMMCSKILQPGSLV 124
TLVGLLN +N F + V+ + F+++L D R +RFL ++ ++ SL+
Sbjct: 90 TTLVGLLNAKNYKFGGEFVDHMVKTFKESLKMCRWDAARYSLRFLADLVNCHVISATSLL 149
Query: 125 VVFETLLSSAATTVDEDKGNPSWQARADFYVTCILSCLPWGGAELIEQVPEEIERVMAGL 184
+ +T+ +D + Q R D++V +LS LPW G +L E+ +E ++ +
Sbjct: 150 QLLDTM-------IDVSNEDTVPQVRRDWFVFAVLSTLPWVGRDLYEKKESALESLLLRI 202
Query: 185 EAYLSIRRHTSDTGLSFFEEDDESGKGLVEKDFLEDLWHRVQALSSNGWKLDSVPRPHLS 244
E YL+ R L + D ++++L+ LW +++ L + W +PRP+L+
Sbjct: 203 EVYLNKRSKKHHNALRVWSSDAPHP----QEEYLDCLWAQIRKLRQDNWAEKHIPRPYLT 258
Query: 245 FEAQLVSGKSHEFGPISCPEQPDVPTAVSGITHGKQKHDAELKYPQ-----RIRRLNIFP 299
F+ L H I P H+ YP R+ P
Sbjct: 259 FDTILCEALQHNLPQIIPP-----------------PHNDAFVYPMPWVVYRMFDYTDCP 301
Query: 300 ASKSEVDMQPIDRFILEEYLLDVLLFFNGCRKECAFYMVNLPVPFR--YEYLMAETIFSQ 357
+ I+RF++EE+L ++ ++ RK+CA +++ P + EY + E IF++
Sbjct: 302 DGPNLPGAHSIERFLIEEHLHHIIETYHHERKDCAAQLLSFPFKHKIPLEYCIVEVIFAE 361
Query: 358 LLLLPQPPFKPIYYTLVIMDLCKALPGAFPAVVAGAVRALFDKIADLDMECRIRFILWFS 417
L +P P + I Y ++++LCK P P V+A A LF +I ++ C RF+ WFS
Sbjct: 362 LFHMPTPRYLDICYGSILIELCKLQPATLPQVLAQATEILFMRIDSMNTSCFDRFVNWFS 421
Query: 418 HHLSNFQFIWPWEEWAYVLDLPKWAPQRVFVQEVLEREVRLSYWDKVKQSIENAPALEEL 477
+HLSNF+F W W+EW L L P+ F+QEVL++ +RLSY ++ + + +L
Sbjct: 422 YHLSNFKFTWSWDEWDSCLLLDGEHPRPKFIQEVLQKCLRLSYHQRITEMMPTTYG--KL 479
Query: 478 LPPKGGPNFKYSMEDGRERSEEHALSAELTNKVKGRQTAREIIVWVEESVYPIHGL---- 533
+P PNFKY+ E+ A++ +L ++ + + E++ ++E P G
Sbjct: 480 IPQVPVPNFKYASEEAASLPGT-AVAHQLVVAIRQKCSPEEVVNILKE--IPNSGYSGEE 536
Query: 534 -------GVTIKVVVQTLLDIGSKSFTHLITVLERYGQVISKICPDHDKQLMLIEEVSLF 586
+ I V VQTLL++GSKSF+H + ++ V + + Q+ ++ +
Sbjct: 537 MSDGTFNALKIDVFVQTLLNLGSKSFSHSFAAISKFHSVFRALAETEEAQICVLHNIYEL 596
Query: 587 WKNNTQNAAISIDRMMGYRLISNLAIVRWVFSPENIDQFHASDRPWEVLRNAVSKTYNRI 646
W ++ Q + +D+++ +++ A+ W+FS E +F WE+L + K
Sbjct: 597 WSSHQQMMVVLVDKLLKLQIVDCSAVATWIFSKEMTSEF-TKMYLWEILHLTIKK----- 650
Query: 647 CDLRKEIISLKKGVTLAEEAAAKAKAELEAAESKLSLVDGEPVLGGNPARLSRLKLHAEK 706
+ K +I L +++A++ +KA + ++ +P+ HA+K
Sbjct: 651 --MNKHVIKLNTELSVAKDKLSKADSSSSESDEDAPTKRKKPI------------THADK 696
Query: 707 AKNEEIS-AKESLEAKEALFARAVEENEALYLSLYRNFSNVLMERLPDASRAG 758
E + +E LEA + L+L +++ F +L E + + G
Sbjct: 697 PSEEAVERMEEKLEAANV-------NQKRLFLIVFQRFIMILSEHMLRSDTDG 742
>sp|B4Q034|NCBP1_DROYA Nuclear cap-binding protein subunit 1 OS=Drosophila yakuba GN=Cbp80
PE=3 SV=1
Length = 800
Score = 279 bits (714), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 197/771 (25%), Positives = 366/771 (47%), Gaps = 80/771 (10%)
Query: 5 KNLLLKIGDNCPEYGNSDDLKDHIETCFGVIRRELEHSSDDVPHYIINCAEQIPHKIPLY 64
++L+L++G+ ++ ++ ++E V+ +L + + +CA ++P K +Y
Sbjct: 35 ESLILRVGER-----STSSVESNLEGLVSVLEADLGTFRLKILRILSDCAVRMPEKCTVY 89
Query: 65 GTLVGLLNLENEDFVKKVVETTQRKFQDALDSGNCDRIRILMRFLTVMMCSKILQPGSLV 124
TLVGLLN +N F + V+ + F+++L D R +RFL ++ ++ SL+
Sbjct: 90 TTLVGLLNAKNYKFGGEFVDHMVKTFKESLKLCRWDAARYSLRFLADLVNCHVISATSLL 149
Query: 125 VVFETLLSSAATTVDEDKGNPSWQARADFYVTCILSCLPWGGAELIEQVPEEIERVMAGL 184
+ +T+ +D + Q R D++V +LS LPW G +L E+ +E ++ +
Sbjct: 150 QLLDTM-------IDVSNEDTVPQVRRDWFVFAVLSTLPWVGRDLYEKKESALESLLLRI 202
Query: 185 EAYLSIRRHTSDTGLSFFEEDDESGKGLVEKDFLEDLWHRVQALSSNGWKLDSVPRPHLS 244
E YL+ R L + D ++++L+ LW +++ L + W +PRP+L
Sbjct: 203 EVYLNKRSKKHHNALRVWSSDAPHP----QEEYLDCLWAQIRKLRQDNWAEKHIPRPYLV 258
Query: 245 FEAQLVSGKSHEFGPISCPEQPDVPTAVSGITHGKQKHDAELKYPQRIRRLNIF---PAS 301
F++ L H I P D + E P + R+ + P
Sbjct: 259 FDSILCEALQHNLPAIVPPPHHD---------------NFEYPMPWVVYRMFDYTDCPDG 303
Query: 302 KSEVDMQPIDRFILEEYLLDVLLFFNGCRKECAFYMVNLPVPFR--YEYLMAETIFSQLL 359
+ I+RF++EE+L ++ ++ RK+CA +++ P + EY + E IF++L
Sbjct: 304 PNLPGAHSIERFLIEEHLHHIIETYHHERKDCAAQLLSFPFKHKIPLEYCIVEVIFAELF 363
Query: 360 LLPQPPFKPIYYTLVIMDLCKALPGAFPAVVAGAVRALFDKIADLDMECRIRFILWFSHH 419
+P P + I Y ++++LCK P P V+A A LF +I ++ C RF+ WFS+H
Sbjct: 364 HMPTPRYLDICYGSILIELCKLQPATLPQVLAQATEILFMRIDSMNTSCFDRFVNWFSYH 423
Query: 420 LSNFQFIWPWEEWAYVLDLPKWAPQRVFVQEVLEREVRLSYWDKVKQSIENAPALEELLP 479
LSNF+F W W+EW L L P+ F+QEVL++ +RLSY ++ + + A +L+P
Sbjct: 424 LSNFKFTWSWDEWDSCLLLDGEHPRPKFIQEVLQKCLRLSYHQRITEMMPTTYA--KLIP 481
Query: 480 PKGGPNFKYSMEDGRERSEEHALSAELTNKVKGRQTAREIIVWVEESVYPIHGL------ 533
PN+KY+ E+ ++ +L ++ + T E++ +++ P G
Sbjct: 482 LTPVPNYKYANEEAANLPGT-TVAHQLVVAIRQKCTPEEVVNILKD--IPSSGYSGEEMS 538
Query: 534 -----GVTIKVVVQTLLDIGSKSFTHLITVLERYGQVISKICPDHDKQLMLIEEVSLFWK 588
+ I V VQTLL++GSKSF+H + ++ V + + Q+ ++ + W
Sbjct: 539 DGSFNALKIDVFVQTLLNLGSKSFSHSFAAISKFHSVFRALAETEEAQICILHNIYELWS 598
Query: 589 NNTQNAAISIDRMMGYRLISNLAIVRWVFSPENIDQFHASDRPWEVLRNAVSKTYNRICD 648
++ Q + ID+++ +++ A+ W+FS E +F WE+L + K
Sbjct: 599 SHQQMMVVLIDKLLKLQIVDCSAVATWIFSKEMTGEF-TKMYLWEILHLTIKK------- 650
Query: 649 LRKEIISLKKGVTLAEEAAAKAKAELEAAESKLSLVDGEPVLGGNPARLSRLKLHAEKAK 708
+ K +I L ++ A++ AKA + +E S +P+ HA+K
Sbjct: 651 MNKHVIKLNSELSEAKDKLAKADSSSSDSEDDSSHKRKKPI------------THADKPS 698
Query: 709 NEEIS-AKESLEAKEALFARAVEENEALYLSLYRNFSNVLMERLPDASRAG 758
E + +E LEA + L+L +++ F +L E L + G
Sbjct: 699 EEVVERMEEKLEAANV-------NQKRLFLIVFQRFIMILSEHLLRSDTDG 742
>sp|Q7K4N3|NCBP1_DROME Nuclear cap-binding protein subunit 1 OS=Drosophila melanogaster
GN=Cbp80 PE=1 SV=1
Length = 800
Score = 279 bits (714), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 197/771 (25%), Positives = 366/771 (47%), Gaps = 80/771 (10%)
Query: 5 KNLLLKIGDNCPEYGNSDDLKDHIETCFGVIRRELEHSSDDVPHYIINCAEQIPHKIPLY 64
++L+L++G+ ++ ++ ++E V+ +L + + +CA ++P K +Y
Sbjct: 35 ESLILRVGER-----STSSVESNLEGLVSVLEADLGTFRLKILRILSDCAVRMPEKCTVY 89
Query: 65 GTLVGLLNLENEDFVKKVVETTQRKFQDALDSGNCDRIRILMRFLTVMMCSKILQPGSLV 124
TLVGLLN +N F + V+ + F+++L D R +RFL ++ ++ SL+
Sbjct: 90 TTLVGLLNAKNYKFGGEFVDHMVKTFKESLKMCRWDAARYSLRFLADLVNCHVISATSLL 149
Query: 125 VVFETLLSSAATTVDEDKGNPSWQARADFYVTCILSCLPWGGAELIEQVPEEIERVMAGL 184
+ +T+ +D + Q R D++V +LS LPW G +L E+ +E ++ +
Sbjct: 150 QLLDTM-------IDVSNEDTVPQVRRDWFVFAVLSTLPWVGRDLYEKKESALESLLLRI 202
Query: 185 EAYLSIRRHTSDTGLSFFEEDDESGKGLVEKDFLEDLWHRVQALSSNGWKLDSVPRPHLS 244
E YL+ R L + D ++++L+ LW +++ L + W +PRP+L
Sbjct: 203 EVYLNKRSKKHHNALRVWSSDAPHP----QEEYLDCLWAQIRKLRQDNWAEKHIPRPYLV 258
Query: 245 FEAQLVSGKSHEFGPISCPEQPDVPTAVSGITHGKQKHDAELKYPQRIRRLNIF---PAS 301
F++ L H I P D + E P + R+ + P
Sbjct: 259 FDSILCEALQHNLPTIVPPPHHD---------------NFEYPMPWVVYRMFDYTDCPDG 303
Query: 302 KSEVDMQPIDRFILEEYLLDVLLFFNGCRKECAFYMVNLPVPFR--YEYLMAETIFSQLL 359
+ I+RF++EE+L ++ ++ RK+CA +++ P + EY + E +F++L
Sbjct: 304 PNLPGAHSIERFLIEEHLHHIIETYHHERKDCAAQLLSFPYKHKIPLEYCIVEVVFAELF 363
Query: 360 LLPQPPFKPIYYTLVIMDLCKALPGAFPAVVAGAVRALFDKIADLDMECRIRFILWFSHH 419
+P P + I Y ++++LCK P P V+A A LF +I ++ C RF+ WFS+H
Sbjct: 364 HMPTPRYLDICYGSILIELCKLQPATLPQVLAQATEILFMRIDSMNTSCFDRFVNWFSYH 423
Query: 420 LSNFQFIWPWEEWAYVLDLPKWAPQRVFVQEVLEREVRLSYWDKVKQSIENAPALEELLP 479
LSNF+F W W+EW L L P+ F+QEVL++ +RLSY ++ + + A +L+P
Sbjct: 424 LSNFKFTWSWDEWDSCLLLDGEHPRPKFIQEVLQKCLRLSYHQRITEMMPTTYA--KLIP 481
Query: 480 PKGGPNFKYSMEDGRERSEEHALSAELTNKVKGRQTAREIIVWVEESVYPIHGL------ 533
PN+KY+ E+ ++ +L ++ + T E++ +++ P G
Sbjct: 482 LTPVPNYKYANEEAANLPGT-TVAHQLVVAIRQKCTPEEVVNILKD--IPNSGYSGEEMS 538
Query: 534 -----GVTIKVVVQTLLDIGSKSFTHLITVLERYGQVISKICPDHDKQLMLIEEVSLFWK 588
+ I V VQTLL++GSKSF+H + ++ V + + Q+ ++ + W
Sbjct: 539 DGSFNALKIDVFVQTLLNLGSKSFSHSFAAISKFHSVFRALAETEEAQICILHNIFELWS 598
Query: 589 NNTQNAAISIDRMMGYRLISNLAIVRWVFSPENIDQFHASDRPWEVLRNAVSKTYNRICD 648
++ Q + ID+++ +++ A+ W+FS E +F WE+L + K
Sbjct: 599 SHQQMMVVLIDKLLKLQIVDCSAVATWIFSKEMTGEF-TKLYLWEILHLTIKK------- 650
Query: 649 LRKEIISLKKGVTLAEEAAAKAKAELEAAESKLSLVDGEPVLGGNPARLSRLKLHAEKAK 708
+ K +I L ++ A+E AKA + +E S +P+ HA+K
Sbjct: 651 MNKHVIKLNTELSEAKEKLAKADSSSSDSEDDSSHKRKKPI------------THADKPS 698
Query: 709 NEEIS-AKESLEAKEALFARAVEENEALYLSLYRNFSNVLMERLPDASRAG 758
E + +E LEA + L+L +++ F +L E L + G
Sbjct: 699 EEVVERMEEKLEAANV-------NQKRLFLIVFQRFIMILSEHLLRSDTDG 742
>sp|B4I0W6|NCBP1_DROSE Nuclear cap-binding protein subunit 1 OS=Drosophila sechellia
GN=Cbp80 PE=3 SV=1
Length = 800
Score = 277 bits (709), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 196/771 (25%), Positives = 366/771 (47%), Gaps = 80/771 (10%)
Query: 5 KNLLLKIGDNCPEYGNSDDLKDHIETCFGVIRRELEHSSDDVPHYIINCAEQIPHKIPLY 64
++L+L++G+ ++ ++ ++E V+ +L + + +CA ++P K +Y
Sbjct: 35 ESLILRVGER-----STSSVESNLEGLVSVLEADLGTFRLKILRILSDCAVRMPEKCTVY 89
Query: 65 GTLVGLLNLENEDFVKKVVETTQRKFQDALDSGNCDRIRILMRFLTVMMCSKILQPGSLV 124
TLVGLLN +N F + V+ + F+++L D R +RFL ++ ++ SL+
Sbjct: 90 TTLVGLLNAKNYKFGGEFVDHMVKTFKESLKMCRWDAARYSLRFLADLVNCHVISATSLL 149
Query: 125 VVFETLLSSAATTVDEDKGNPSWQARADFYVTCILSCLPWGGAELIEQVPEEIERVMAGL 184
+ +T+ +D + Q R D++V +LS LPW G +L E+ +E ++ +
Sbjct: 150 QLLDTM-------IDVSNEDTVPQVRRDWFVFAVLSTLPWVGRDLYEKKESALESLLLRI 202
Query: 185 EAYLSIRRHTSDTGLSFFEEDDESGKGLVEKDFLEDLWHRVQALSSNGWKLDSVPRPHLS 244
E YL+ R L + D ++++L+ LW +++ L + W +PRP+L
Sbjct: 203 EVYLNKRSKKHHNALRVWSSDAPHP----QEEYLDCLWAQIRKLRQDNWAEKHIPRPYLV 258
Query: 245 FEAQLVSGKSHEFGPISCPEQPDVPTAVSGITHGKQKHDAELKYPQRIRRLNIF---PAS 301
F++ L H I P D + E P + R+ + P
Sbjct: 259 FDSILCEALQHNLPTIVPPPHHD---------------NFEYPMPWVVYRMFDYTDCPDG 303
Query: 302 KSEVDMQPIDRFILEEYLLDVLLFFNGCRKECAFYMVNLPVPFR--YEYLMAETIFSQLL 359
+ I+RF++EE+L ++ ++ RK+CA +++ P + EY + E +F++L
Sbjct: 304 PNLPGAHSIERFLIEEHLHHIIETYHHERKDCAAQLLSFPYKHKIPLEYCIVEVVFAELF 363
Query: 360 LLPQPPFKPIYYTLVIMDLCKALPGAFPAVVAGAVRALFDKIADLDMECRIRFILWFSHH 419
+P P + I Y ++++LCK P P V+A A LF +I ++ C RF+ WFS+H
Sbjct: 364 HMPTPRYLDICYGSILIELCKLQPATLPQVLAQATEILFMRIDSMNTSCFDRFVNWFSYH 423
Query: 420 LSNFQFIWPWEEWAYVLDLPKWAPQRVFVQEVLEREVRLSYWDKVKQSIENAPALEELLP 479
LSNF+F W W+EW L L P+ F+QEVL++ +RLSY ++ + + A +L+P
Sbjct: 424 LSNFKFTWSWDEWDSWLLLDGEHPRPKFIQEVLQKCLRLSYHQRITEMMPTTYA--KLIP 481
Query: 480 PKGGPNFKYSMEDGRERSEEHALSAELTNKVKGRQTAREIIVWVEESVYPIHGL------ 533
PN+KY+ E+ ++ +L ++ + T E++ +++ P G
Sbjct: 482 LTPVPNYKYANEEAASLPGT-TVAHQLVVAIRQKCTPEEVVNILKD--IPNSGYSGEEMS 538
Query: 534 -----GVTIKVVVQTLLDIGSKSFTHLITVLERYGQVISKICPDHDKQLMLIEEVSLFWK 588
+ I V VQTLL++GSKSF+H + ++ V + + Q+ ++ + W
Sbjct: 539 DGSFNALKIDVFVQTLLNLGSKSFSHSFAAISKFHSVFRALAETEEAQICILHNIFELWS 598
Query: 589 NNTQNAAISIDRMMGYRLISNLAIVRWVFSPENIDQFHASDRPWEVLRNAVSKTYNRICD 648
++ Q + ID+++ +++ A+ W+FS E +F WE+L + K
Sbjct: 599 SHQQMMVVLIDKLLKLQIVDCSAVATWIFSKEMTGEF-TKLYLWEILHLTIKK------- 650
Query: 649 LRKEIISLKKGVTLAEEAAAKAKAELEAAESKLSLVDGEPVLGGNPARLSRLKLHAEKAK 708
+ K +I L ++ A++ AKA + +E S +P+ HA+K
Sbjct: 651 MNKHVIKLNSELSEAKDKLAKADSSSSDSEDDSSHKRKKPI------------THADKPS 698
Query: 709 NEEIS-AKESLEAKEALFARAVEENEALYLSLYRNFSNVLMERLPDASRAG 758
E + +E LEA + L+L +++ F +L E L + G
Sbjct: 699 EEVVERMEEKLEAANV-------NQKRLFLIVFQRFIMILSEHLLRSDTDG 742
>sp|C0H906|NCBP1_SALSA Nuclear cap-binding protein subunit 1 OS=Salmo salar GN=ncbp1 PE=2
SV=1
Length = 796
Score = 276 bits (707), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 191/722 (26%), Positives = 358/722 (49%), Gaps = 56/722 (7%)
Query: 5 KNLLLKIGDNCPEYGNSDDLKDHIETCFGVIRRELEHSSDDVPHYIINCAEQIPHKIPLY 64
++L+ ++G+ ++ L+ ++E GV+ +L + + + + A +P K+ +Y
Sbjct: 32 ESLICRVGEK-----STSSLESNLEGLAGVLEADLPNYKNKILRILCAVARLLPEKLTVY 86
Query: 65 GTLVGLLNLENEDFVKKVVETTQRKFQDALDSGNCDRIRILMRFLTVMMCSKILQPGSLV 124
TLVGLLN N +F + VE R+ ++ L + L+RFL ++ ++ S+V
Sbjct: 87 TTLVGLLNARNYNFGGEFVEAMIRQLKETLKANLYTDALYLVRFLCDLVNCHVIAAPSMV 146
Query: 125 VVFETLLSSAATTVDEDKGNPSWQARADFYVTCILSCLPWGGAELIEQVPEEIERVMAGL 184
+FE +S T +ED Q R+D++V +LS LPW G EL E+ E++R++ +
Sbjct: 147 AMFENFVS---VTQEEDVP----QVRSDWFVYAVLSSLPWVGKELDEKKDVEMDRLLNQI 199
Query: 185 EAYLSIRRHTSDTGLSFFEEDDESGKGLVEKDFLEDLWHRVQALSSNGWKLDSVPRPHLS 244
+ YL R T L + + K ++++L+ L+ ++Q L + W+ + RP+++
Sbjct: 200 DGYLKRRLKTHVPMLQVWTAE----KPHPQEEYLDCLYAQIQKLKKDRWQERHILRPYIA 255
Query: 245 FEAQLVSGKSHEFGPISCP-EQPDVPTAVSGITHGKQKHDAELKYPQRIRRLNIFPASKS 303
F++ L H P + P PD + + + + P + P S S
Sbjct: 256 FDSVLCEALQHNLPPFTPPAHMPDCQYPMPRVIFRMFDYTDAPEGP-------VMPGSHS 308
Query: 304 EVDMQPIDRFILEEYLLDVLLFFNGCRKECAFYMVNLP----VPFRYEYLMAETIFSQLL 359
++RF++E+ L +++ RK CA +++ P +P Y + E IF +L
Sbjct: 309 ------VERFVIEDNLHNIIKSHWKERKTCAAQLLSYPGKNKIPLNYH--IVEVIFGELF 360
Query: 360 LLPQPPFKPIYYTLVIMDLCKALPGAFPAVVAGAVRALFDKIADLDMECRIRFILWFSHH 419
LP PP + YT ++++LCK PG+ P V+A A ++ ++ ++ C R + WFSHH
Sbjct: 361 QLPCPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMMYVRLDTMNTICIDRLLNWFSHH 420
Query: 420 LSNFQFIWPWEEWAYVLDLPKWAPQRVFVQEVLEREVRLSYWDKVKQSIENAPALEELLP 479
LSNFQF W W++W L L P+ FV+EVLE+ +RLSY ++ + P L+P
Sbjct: 421 LSNFQFRWSWDDWVDCLALDADKPKPKFVKEVLEKCMRLSYHQRIVDIV--PPTFSGLIP 478
Query: 480 PKGGPNFKYSMEDGRERS-EEHALSAELTNKVKGRQTAREIIVWVEESVYPIH------G 532
P F Y +D + +A++ + N +K R + EI+ +++ P G
Sbjct: 479 --ADPIFFYKYQDEANSALPGYAVAIAVGNAIKNRASNEEILTVLKDVPNPNQEDDDDEG 536
Query: 533 LG---VTIKVVVQTLLDIGSKSFTHLITVLERYGQVISKICPDHDKQLMLIEEVSLFWKN 589
G + I+V +QTLL + +KSF+H + L ++ +++ + + +L ++ V WKN
Sbjct: 537 EGFNPLKIEVFLQTLLHLAAKSFSHSFSALAKFHEILKALTDCDEGKLHILRVVYEVWKN 596
Query: 590 NTQNAAISIDRMMGYRLISNLAIVRWVFSPENIDQFHASDRPWEVLRNAVSKTYNRICDL 649
+ Q ++ +D+++ +++ A+ W+FSP +F WE+L + + K + +
Sbjct: 597 HPQMVSVLVDKLIRTQIVDCAAVANWLFSPSMAHEF-TRFYVWEILHSTIRKMNKHVQKI 655
Query: 650 RKEIISLKKGVTLAEEAAAKAKAELEAAESKLSLVDGEPVLGGNPARLSRLKLHAEKAKN 709
+KE+ K + + K + E E DG+ ++ RL+ E A++
Sbjct: 656 QKELEEAKDKLERQQHKKQKDSGDEEDMEKNSEDEDGQL-----EEQIERLQEKVESAQS 710
Query: 710 EE 711
E+
Sbjct: 711 EQ 712
>sp|Q16UN6|NCBP1_AEDAE Nuclear cap-binding protein subunit 1 OS=Aedes aegypti GN=Cbp80
PE=3 SV=1
Length = 813
Score = 275 bits (704), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 197/752 (26%), Positives = 350/752 (46%), Gaps = 80/752 (10%)
Query: 33 GVIRRELEHSSDDVPHYIINCAEQIPHKIPLYGTLVGLLNLENEDFVKKVVETTQRKFQD 92
V+ +L + + + C ++P K +Y T+VGL+N +N +F + V+ + F++
Sbjct: 58 SVLESDLGNFRSKILRILSECPIKMPEKCTIYSTMVGLMNAKNYNFGGEFVDHMVKTFKE 117
Query: 93 ALDSGNCDRIRILMRFLTVMMCSKILQPGSLVVVFETLLSSAATTVDEDKGNPSWQARAD 152
+L D R +RFL+ ++ ++ SL+ + + ++ +A +ED Q R D
Sbjct: 118 SLKQCRWDAARYALRFLSDLVNCHVISTNSLLQLLDNMVDAA----NEDSVP---QVRRD 170
Query: 153 FYVTCILSCLPWGGAELIEQVPEEIERVMAGLEAYLSIRRHTSDTGLSFFEEDDESGKGL 212
+YV +LS LPW G EL E+ +E ++ +E +L+ R L + D
Sbjct: 171 WYVFAVLSTLPWVGRELYEKKESALENLLVRIEVFLNKRTKKHHNSLRVWSVDAPHP--- 227
Query: 213 VEKDFLEDLWHRVQALSSNGWKLDSVPRPHLSFEAQLVSGKSHEFGPISCPEQPDVPTAV 272
++++L+ LW +++ L + W +PRP+L+F++ L H I P
Sbjct: 228 -QEEYLDCLWAQIRKLRQDNWAEKHIPRPYLAFDSVLCEALQHNLPLIHPP--------- 277
Query: 273 SGITHGKQKHDAELKYPQ-----RIRRLNIFPASKSEVDMQPIDRFILEEYLLDVLLFFN 327
H +YP R+ PA I+RF++EE+L ++ +
Sbjct: 278 --------PHQDSFEYPMPWVVYRMFDYTDCPAGPILPGAHSIERFLIEEHLHSIIEAHH 329
Query: 328 GCRKECAFYMVNLP----VPFRYEYLMAETIFSQLLLLPQPPFKPIYYTLVIMDLCKALP 383
RK+CA ++NL +P EY + E IF++L +P P + I Y ++++LCK P
Sbjct: 330 WERKDCAANLLNLSYKDKIPL--EYCIVEVIFAELFKMPTPRYLDICYGSILIELCKLQP 387
Query: 384 GAFPAVVAGAVRALFDKIADLDMECRIRFILWFSHHLSNFQFIWPWEEWAYVLDLPKWAP 443
P V+A A LF +I ++ C RF WFS+HLSNFQF W W++W L L P
Sbjct: 388 SKMPQVLAQATEILFMRIDSMNTSCFDRFANWFSYHLSNFQFRWSWDDWDSCLLLEPEHP 447
Query: 444 QRVFVQEVLEREVRLSYWDKVKQSIENAPALEELLPPKGGPNFKYSMEDG---------- 493
+ F++EVL + +RLSY D+ K+ + +L+P P +KY+ME
Sbjct: 448 RPKFIEEVLLKCLRLSYHDRFKEMMPE--TYSKLIPKPPMPTYKYTMEGAASLPGTATAH 505
Query: 494 ------RERSEEHALSAELTNKVKGRQTAREIIVWVEESVYPIHGLGVTIKVVVQTLLDI 547
R++ + EL + R+T+ + VE + P+ I V VQTLL++
Sbjct: 506 KLVVAIRQKCTPEDVLNELKDLPNPRETSENDM--VESTFNPL-----KIDVFVQTLLNL 558
Query: 548 GSKSFTHLITVLERYGQVISKICPDHDKQLMLIEEVSLFWKNNTQNAAISIDRMMGYRLI 607
GSKSF+H + ++ V + + Q+ ++ V W N+ Q + ID+++ +++
Sbjct: 559 GSKSFSHTFAAISKFHLVFKTLAETEEAQICILHNVFELWVNHQQMMVVIIDKLLKTQIV 618
Query: 608 SNLAIVRWVFSPENIDQFHASDRPWEVLRNAVSKTYNRICDLRKEIISLKKGVTLAEEAA 667
A+ WVFS E + +F WE+L + K + + + L K ++ A+E
Sbjct: 619 ECSAVATWVFSKEMVGEF-TKMYLWEILHLTIKK-------MNQHVTKLSKELSDAKERL 670
Query: 668 AKAKAELEAAESKLSLVDGEPVLGGNPARLSRLKLHAEKAKNEEIS-AKESLEAKEALFA 726
+ + + + G + R + +A+K E++ +E LEA
Sbjct: 671 DRNAESSSSESEEETAPAGTDAVTPQRRRKKPIGDNADKPTEEQVERMEEKLEA------ 724
Query: 727 RAVEENEALYLSLYRNFSNVLMERLPDASRAG 758
A + + L+L +++ F +L E L G
Sbjct: 725 -AYVDQKRLFLIIFQRFIMILSEHLVKCDTDG 755
>sp|Q55D17|NCBP1_DICDI Nuclear cap-binding protein subunit 1 OS=Dictyostelium discoideum
GN=ncbp1 PE=3 SV=1
Length = 772
Score = 269 bits (687), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 191/686 (27%), Positives = 323/686 (47%), Gaps = 98/686 (14%)
Query: 2 SSWKNLLLKIGDNCPEYGNSDDLKDHIETCFGVIRRELEHSSDDVPHYIINCAEQIPHKI 61
S +L+++IGD + L+ +I+ + ++ S + + C + +K
Sbjct: 38 SKLTSLIVRIGDKA-----TSSLESNIDALANALLADIPKQSSLIQDILFKCVSSLTYKT 92
Query: 62 PLYGTLVGLLNLENEDFVKKVVETTQRKFQDALDSGNCDRIRILMRFLTVMMCSKILQPG 121
P+Y TLVGL+N++N +F K+VV + A++ ++L+RF+ ++ + +L
Sbjct: 93 PIYATLVGLINVKNSEFGKEVVCRLVDEIFSAMEKKKFHNAKLLIRFIPELVNANVLTIN 152
Query: 122 SLVVVFETLLSSAATTVDEDKGNPSWQARADFYVTCILSCLPWGGAELIEQVPEEIERVM 181
++ ++ETLLS T+ P+ +AD++V +LS +PW G L +++ V+
Sbjct: 153 AIFELYETLLSVLNTS----DYTPN---KADYFVFLVLSTIPWIGEHLSHNHSGQLDAVI 205
Query: 182 AGLEAYLSIRRHTSDTGLSFFEEDDESGKGLVEKDFLEDLWHRVQAL--SSNGWKLDSVP 239
E+Y+ R TG F + +G D LE + ++++L W ++ +
Sbjct: 206 EECESYIQSR----STGDKKFYQAYNNG---YTDDRLESMLKQIKSLRDCDQPWIVNGIL 258
Query: 240 RPHLSFEAQLVSGKS--HEFGPISCPEQPDVPTAVSGITHGKQKHDAELKYPQRIRRLNI 297
RP+ F L S S H I PE D +L+YP + +
Sbjct: 259 RPYKHFNETLTSSSSQQHILPTIHFPE------------------DEKLEYPNNLNK--- 297
Query: 298 FPASK--SEVDMQPIDRFILEEYLLDVLLFFNGCRKECAFYMVNLPVPFRYEYLMAETIF 355
P + S + ++R+I+E+Y++D+L FFN KEC+ ++ +LPV + ++ ETI
Sbjct: 298 -PLFRVLSNDNNNSVERYIVEDYIIDILSFFNSDHKECSKFIYSLPVENEIDDIVVETIL 356
Query: 356 SQLLLLPQPPFKPIYYTLVIMDLCKALPGAFPAVVAGAVRALFDKIADLDMECRIRFILW 415
++ +LP+P FKPIYY+++ +D K+ P P V A A+ LF+ I LD E RF L
Sbjct: 357 GEMFMLPEPTFKPIYYSVLFVDFFKSQPSVIP-VFAYAINLLFENIHKLDFEVMDRFALA 415
Query: 416 FSHHLSNFQFIWPWEEWAYVLDLPKWAPQR------------------------------ 445
F+HHLSNF + W W +WA L P A
Sbjct: 416 FAHHLSNFDYKWIWSDWAQSLVPPTAAAAAAAATTTVEGSTSNENKEDSTATTTAIIEDE 475
Query: 446 ----------VFVQEVLEREVRLSYWDKVKQSIENAPA-LEELLPPKGGPNFKYSMEDG- 493
++++ VL RLSY +K+KQ N P+ + LPP P FK+ D
Sbjct: 476 NQIRNRELRIIYIKRVLSSLCRLSYLEKIKQ---NLPSEYHQYLPPSPAPTFKFLNADNP 532
Query: 494 -RERSEEHALSAELTNKVKGRQTAREIIVWVEESVYPIHGLGVTIKVVVQTLLDIGSKSF 552
E E A S +L K ++ II V P H + + ++++ + +L IGS SF
Sbjct: 533 EEESKELIAESHKLLLSFKTKEPLENIISHVAN--IPSH-INI-VELLTKCILQIGSTSF 588
Query: 553 THLITVLERYGQVISKICPDHDKQLMLIEEVSLFWKNNTQNAAISIDRMMGYRLISNLAI 612
+HL +ERY + + D + I + FWK + Q+ I +D+ + +++I +
Sbjct: 589 SHLTYAIERYITLFKTVLKSQDDRQECIRSIFEFWKLSHQHIVIVVDKFVTFKIIYPIDT 648
Query: 613 VRWVFSPENIDQFHASDRPWEVLRNA 638
V W PENID+F WE L N+
Sbjct: 649 VTWFMKPENIDRFITEPFTWECLHNS 674
>sp|B4M7T6|NCBP1_DROVI Nuclear cap-binding protein subunit 1 OS=Drosophila virilis
GN=Cbp80 PE=3 SV=1
Length = 783
Score = 251 bits (642), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 191/765 (24%), Positives = 352/765 (46%), Gaps = 85/765 (11%)
Query: 5 KNLLLKIGDNCPEYGNSDDLKDHIETCFGVIRRELEHSSDDVPHYIINCAEQIPHKIPLY 64
++L+L++G+ ++ ++ ++E V+ +L + + +CA ++P K +Y
Sbjct: 35 ESLILRVGER-----STSSVESNLEGLVSVLEADLGTFRLKILRILSDCAVRMPEKCTVY 89
Query: 65 GTLVGLLNLENEDFVKKVVETTQRKFQDALDSGNCDRIRILMRFLTVMMCSKILQPGSLV 124
TLVGLLN +N F + V+ + F+++L D R +RFL ++ ++ SL+
Sbjct: 90 TTLVGLLNAKNYKFGGEFVDYMVKTFKESLKLCRWDAARYSLRFLADLVNCHVISATSLL 149
Query: 125 VVFETLLSSAATTVDEDKGNPSWQARADFYVTCILSCLPWGGAELIEQVPEEIERVMAGL 184
+ +T+ +D + Q R D++V +LS LPW G +L E+ +E ++ +
Sbjct: 150 QLLDTI-------IDVSNEDTVPQVRRDWFVFAVLSTLPWVGRDLYEKKESALESLLLRI 202
Query: 185 EAYLSIRRHTSDTGLSFFEEDDESGKGLVEKDFLEDLWHRVQALSSNGWKLDSVPRPHLS 244
E YL+ R L + D ++++L+ LW +++ L + W +PRP+L
Sbjct: 203 EVYLNKRSKKHHNALRVWSSDAPHP----QEEYLDCLWAQIRKLRQDNWAEKHIPRPYLV 258
Query: 245 FEAQLVSGKSHEFGPISCPEQPDVPTAVSGITHGKQKHDAELKYPQ-----RIRRLNIFP 299
F+A L H I+ P HDA ++YP R+ P
Sbjct: 259 FDAILCEALQHNLPQITPPPH----------------HDA-IEYPMPWVVYRMFDYTDCP 301
Query: 300 ASKSEVDMQPIDRFILEEYLLDVLLFFNGCRKECAFYMVNLPVPFR--YEYLMAETIFSQ 357
+ I+RF++EE+L ++ + RK+CA ++N P + EY + E IF++
Sbjct: 302 DGPNLPGAHSIERFLIEEHLHHIIETHHHERKDCAAQLLNFPFKHKIPLEYCIVEVIFAE 361
Query: 358 LLLLPQPPFKPIYYTLVIMDLCKALPGAFPAVVAGAVRALFDKIADLDMECRIRFILWFS 417
L +P P + I Y ++++LCK PG P V+A A LF +I ++ C RF+ WFS
Sbjct: 362 LFHMPTPRYLDICYGSILIELCKLQPGTLPQVLAQATEILFMRIDSMNTSCFDRFVNWFS 421
Query: 418 HHLSNFQFIWPWEEWAYVLDLPKWAPQRVFVQEVLEREVRLSYWDKVKQSIENAPALEEL 477
+HLSNF+F W W+EW L L P+ F+QEVL++ +RLSY ++ + + A +L
Sbjct: 422 YHLSNFKFTWSWDEWDSCLLLDAEHPRPKFIQEVLQKCLRLSYHQRITEMMPTTYA--KL 479
Query: 478 LPPKGGPNFKYSMEDGRERSEEHALSAELTNKVKGRQTAREIIVWVEESVYPIHGLGVTI 537
+P PN+KY+ E+ ++ +L ++ + T E++ ++E P G
Sbjct: 480 IPVMPVPNYKYTSEEAANLPGT-TVALQLVGAIRQKCTPEEVVNILKE--IPSSGYSGE- 535
Query: 538 KVVVQTLLDIGSKSFTHL---ITVLERYGQVISKICPDHDKQLMLIEEVSLFWKNNTQNA 594
++ SF L ++ V + + Q+ ++ + W ++ Q
Sbjct: 536 --------EMSDGSFNALKIDFCGQSKFHVVFRALAETEEAQICILHNIFELWSSHQQMM 587
Query: 595 AISIDRMMGYRLISNLAIVRWVFSPENIDQFHASDRPWEVLRNAVSKTYNRICDLRKEII 654
+ ID+++ +++ A+ W+FS E +F WE+L + K + K +I
Sbjct: 588 VVLIDKLLKLQIVDCSAVATWIFSKEMTGEF-TKMYLWEILHLTIKK-------MNKHVI 639
Query: 655 SLKKGVTLAEEAAAKAKAELEAAESKLSLVDGEPVLGGNPARLSRLKLHAEKAKNEEIS- 713
L + A+E +KA + + +P+ HA+K E +
Sbjct: 640 KLDTELDNAKEKLSKADSSSSDTDEDTPHKRKKPI------------THADKPSEEVVER 687
Query: 714 AKESLEAKEALFARAVEENEALYLSLYRNFSNVLMERLPDASRAG 758
+E LEA + L+L +++ F +L E L + G
Sbjct: 688 MEEKLEAANV-------NQKRLFLIVFQRFIMILSEHLLRSDTDG 725
>sp|A8XG63|NCBP1_CAEBR Nuclear cap-binding protein subunit 1 OS=Caenorhabditis briggsae
GN=ncbp-1 PE=3 SV=3
Length = 793
Score = 233 bits (594), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 182/688 (26%), Positives = 319/688 (46%), Gaps = 72/688 (10%)
Query: 10 KIGDNCPEYGNSDDLKDHIETCFGVIRRELEHSSDDVPHYIINCAEQIPHKIPLYGTLVG 69
K+GD ++ ++E + +LE + + CA +P+++ +Y TLVG
Sbjct: 37 KVGDK----NTGSSIEANLEKLTAFLHDDLEKYRSSIIDIVAGCAIYLPNRVTVYTTLVG 92
Query: 70 LLNLENEDFVKKVVETTQRKFQDALDSGNCDRIRILMRFLTVMMCSKILQPGSLVVVFET 129
LLN +N +F VVE + QD L + L FL + S +L S+ E+
Sbjct: 93 LLNAKNFNFGGDVVEKLIAEQQDLLLKQKYQEAQNLAIFLCDLGNSGVLTAQSIGEYLES 152
Query: 130 LLSSAATTVDEDKGNPSWQARADFYVTCILSCLPWGGAELIEQVPEEIERVMAGLEAYLS 189
+++A ++ P Q R D+Y+ +L CLPW G EL E+ E++E ++ + YL
Sbjct: 153 FIAAAF-----EENMP--QVRNDYYIQTVLRCLPWIGKELTEKAQEQMENIVEAVGKYLE 205
Query: 190 IRRHTSDTGLSFFEEDDESGKGLVEKDFLEDLWHRVQALSSNGWKLDSVPRPHLSFEAQL 249
+R L + E + ++D+LE L +++ L + W + +PR + +FEA L
Sbjct: 206 MRNKNHVPLLRVWREGSTDQE---QEDYLESLSAQIENLRTANWMQNHIPRYYNTFEAVL 262
Query: 250 VSGKSHEFGPISCPEQPDVPTAVSGITHGKQKHDAELKYPQRIRRLNIFPASKSEVDMQ- 308
H S PE H +++ YP + +F + D Q
Sbjct: 263 QDALQHNLPSFSSPE-----------------HTSDMIYPYPLVVFRLFQDADCGTDSQL 305
Query: 309 ----PIDRFILEEYLLDVLLFFNGCRKECAFYMVNL-------PVPFRYEYLMAETIFSQ 357
IDRF+ E + ++ RK CA ++ PV F L+ ETIF Q
Sbjct: 306 PSGHSIDRFLFEGEISWIIEKNQFNRKSCARELLAFADENPTAPVGF----LIFETIFGQ 361
Query: 358 LLLLPQPPFKPIYYTLVIMDLCKALPGAFPAVVAGAVRALFDKIADLDMECRIRFILWFS 417
+L LP P+ I++ ++++L K P +P ++ V +F + + C R + WFS
Sbjct: 362 MLRLPHAPYPAIFHCSLVLELLKLKPNDYPNILCKTVDLIFSRADSMQPICIDRMVDWFS 421
Query: 418 HHLSNFQFIWPWEEWAYVLDLPKWAPQRVFVQEVLEREVRLSYWDKVKQSIENAPALEEL 477
HLSNFQ+ + W+EW + +++ ++VF++EV+E+ RL ++K+ I P+
Sbjct: 422 FHLSNFQYRYTWDEWKDCISNDEFSGRQVFLREVIEKCRRLGSYEKI---IAALPSDFVK 478
Query: 478 LPPKGGPNFKYSMEDGRERSEEHALSAE---LTNKVKGRQTAREIIVWV------EESVY 528
+ P P +Y ++ EE A+S T + RQ A + + +E Y
Sbjct: 479 IHP-ASPEIRYLLD------EEDAMSQRAETFTQMFQERQPADAFLKELKSTDENDELPY 531
Query: 529 PIHGLGVTIKVVVQTLLDIGSKSFTHLITVLERYGQVISKICPDHDK-QLMLIEEVSLFW 587
I+ GV + V +L + SK+++H + L RY + +C ++ Q L+E + W
Sbjct: 532 NINEFGVFVTV----MLKMASKTYSHNFSALFRYKDTLKTVCDAAEQYQEKLLETLYSCW 587
Query: 588 KNNTQNAAISIDRMMGYRLISNLAIVRWVFSPENIDQFHASDRPWEVLRNAVSKTYNRIC 647
K+N Q I D+++ ++I ++V W+F E + Q H +EVL A+ K +I
Sbjct: 588 KSNQQMLMILTDKLLKMQIIDCSSVVGWLFD-EKMWQEHNRQWLFEVLNQALEKLTRQIN 646
Query: 648 DLRKEIISLKKGVTLAEEAAAKAKAELE 675
+ K+I L + V E+ ++E
Sbjct: 647 VVEKDIKDLTEKVESKEKVTEAGDVKME 674
>sp|O01763|NCBP1_CAEEL Nuclear cap-binding protein subunit 1 OS=Caenorhabditis elegans
GN=ncbp-1 PE=3 SV=3
Length = 798
Score = 225 bits (573), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 189/697 (27%), Positives = 324/697 (46%), Gaps = 76/697 (10%)
Query: 10 KIGDNCPEYGNSDDLKDHIETCFGVIRRELEHSSDDVPHYIINCAEQIPHKIPLYGTLVG 69
K+G+N G+S ++ +++ + +LE + I CA +P+++ +Y TLVG
Sbjct: 37 KVGENT---GSS--IECNLDKLTAFLHDDLEKYRASIIDIIAGCAIYLPNRVTVYTTLVG 91
Query: 70 LLNLENEDFVKKVVETTQRKFQDALDSGNCDRIRILMRFLTVMMCSKILQPGSLVVVFET 129
LLN +N +F VVE + QD L + L FL + S +L S+ E+
Sbjct: 92 LLNSKNFNFGGDVVEKLISEQQDLLSKQKYQEAQNLAIFLCDLGNSGVLTAQSIGEYLES 151
Query: 130 LLSSAATTVDEDKGNPSWQARADFYVTCILSCLPWGGAELIEQVPEEIERVMAGLEAYLS 189
+++A ++ P Q R D+Y+ +L CLPW G EL E+ PE++E + + YL
Sbjct: 152 FIAAAF-----EENMP--QVRNDYYIQTVLRCLPWIGKELTEKAPEQMENIGEAIGKYLE 204
Query: 190 IRRHTSDTGLSFFEEDDESGKGLVEKDFLEDLWHRVQALSSNGWKLDSVPRPHLSFEAQL 249
+R L + E K ++D+LE L +++AL + W + +PR + FE L
Sbjct: 205 LRNKNHVALLQVWREGSTDQK---QEDYLESLSAQIEALRNADWVENHIPRHYSGFETTL 261
Query: 250 VSGKSHEFGPISCPEQPDVPTAVSGITHGKQKHDAELKYPQRIRRLNIFP-ASKSEVDMQ 308
H PE H +++ YP + +F A S +
Sbjct: 262 QDALQHNLPSFQSPE-----------------HTSDMIYPYPLVVFRLFQDADCSAFSSK 304
Query: 309 P------IDRFILEEYLLDVLLFFNGCRKECA-----FYMVNLPVPFRYEYLMAETIFSQ 357
P IDRF+ E + ++ RK CA F N VP + L+ ETIF Q
Sbjct: 305 PLPGDSSIDRFLFEGEIAWIIEKNQFNRKACARELLAFAEENPSVPIGF--LIFETIFGQ 362
Query: 358 LLLLPQPPFKPIYYTLVIMDLCKALPGAFPAVVAGAVRALFDKIADLDMECRIRFILWFS 417
+L LP P+ I++ ++++L K P +P ++ V ++ + + C R + WFS
Sbjct: 363 MLRLPHAPYPAIFHCSLVLELLKLKPDDYPQILVQTVECIYRRADSMQPVCIDRMVDWFS 422
Query: 418 HHLSNFQFIWPWEEWAYVLDLPKWAPQRVFVQEVLEREVRLSYWDKVKQSIENAPALEEL 477
HLSNFQ+ + W +W L+ ++ ++FV+EV+E+ R ++K+ I P
Sbjct: 423 FHLSNFQYRYTWTDWKDCLNKDAFSGSQIFVREVIEKCRRFGSYEKI---IAALPQDFVK 479
Query: 478 LPPKGGPNFKYSMEDGRERSEEHAL---SAELTNKVKGRQTAREIIVWV------EESVY 528
+ P P +Y +++ E+ AL + T + RQ A + + +E Y
Sbjct: 480 IHP-CSPEVRYLIDE-----EDTALVQRAETFTQMFQERQPAEAFLNELKSNDENDELPY 533
Query: 529 PIHGLGVTIKVVVQTLLDIGSKSFTHLITVLERYGQVISKICPDHD-KQLMLIEEVSLFW 587
I+ G+ + V +L + SK+++H + L RY + +C + Q L+E + W
Sbjct: 534 NINEFGLFVMV----MLKMASKTYSHNFSALFRYQTTLKTVCDASELYQEKLLETLYSCW 589
Query: 588 KNNTQNAAISIDRMMGYRLISNLAIVRWVFSPENIDQFHASDRPW--EVLRNAVSKTYNR 645
K N Q I D+++ ++I A+V W+F E + Q H DR W EVL A+ K +
Sbjct: 590 KTNQQMLMILTDKLLKMQVIDCSAVVGWLFD-EKMWQEH--DRQWLFEVLNQALEKLTRQ 646
Query: 646 ICDLRKEIISL--KKGVTLAEEAAAKAKAELEAAESK 680
I + K+I L K + EE ++ +++ E+K
Sbjct: 647 INVVEKDIKELTEKTENKIKEEDDEESDIKMDEDETK 683
>sp|O14253|NCBP1_SCHPO Nuclear cap-binding protein subunit 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=cbc1 PE=1 SV=1
Length = 780
Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 150/654 (22%), Positives = 279/654 (42%), Gaps = 83/654 (12%)
Query: 50 IINCAEQ----IPHKIPLYGTLVGLLNLENEDFVKKVVETTQRKFQDALDSGNCDRIRIL 105
I++C + IP KIP TL+ +L ++K ++ L+S ++
Sbjct: 77 ILDCIQTTAFIIPVKIPHLATLIIRASLRVPLILEKAAAYFCLQYFTNLNSFLYYEAKVD 136
Query: 106 MRFLTVMMCSKILQPGSLVVVFETLLSSAATTVDEDKGNPSWQARADFYVTCILSCLPWG 165
+R L M S LQPG+L +F L A + ++ W D ++ IL LP+
Sbjct: 137 LRMLICM--SFALQPGTLKPLFSLL----ADAISKETKPSVW---GDNFLRIILINLPYF 187
Query: 166 GAELIEQVPEEI-ERVMAGLEAYLSIRRHTSDTGLSFFEEDDESGKGLVEKDFLEDLWHR 224
A + ++ ++ E Y+ R+ + D+ S + L DL ++
Sbjct: 188 IAANNDLGKKDFANEILDQCEIYVRHRKSSITLSNPLSIHDNLSEEEL-------DLLYK 240
Query: 225 VQALS-SNGWKLDSVPRPHLSFEAQLVSGKSHEFGPISCPEQPDVPTAVSGITHGKQKHD 283
LS N + + +P FE+ V P P +P T + +
Sbjct: 241 QLILSRENDFTFPYISQPWKFFESDFVHI---------VPVSPSIPEWTFQPTPQQNELP 291
Query: 284 AELKYPQRIRRLNIFPASKSEVDMQPIDRFILEEYLLDVLLFFNGCRKECAFYMVNLPVP 343
+ ++ + I ++ D + I + +DV+ R E A + +L V
Sbjct: 292 SFKRFFELFNNFEI----RTTPDASDVAASIFRDISVDVINHLEFNRVEAAQVLTDLDVY 347
Query: 344 FRY-------------------------EYLMAETIFSQLLLLPQPPFKPIYYTLVIMDL 378
F Y E ++ E + +LL +KP+YY ++++
Sbjct: 348 FTYKTFALRGTPVNELPNLDPSESRWKAEDIIVEAVLGELLGSQNTTYKPVYYHSLLIEC 407
Query: 379 CKALPGAFPAVVAGAVRALFDKIADLDMECRIRFILWFSHHLSNFQFIWPWEEWAYVLDL 438
C+ P +R ++ +DL ++ RFI WFSHHLSNF F W W EW ++L
Sbjct: 408 CRIAPKILAPTFGRVIRLMYTMSSDLPLQTLDRFIDWFSHHLSNFNFHWKWNEWIPDVEL 467
Query: 439 PKWAPQRVFVQEVLEREVRLSYWDKVKQSIENAPALEELLPPK-GGPNFKYSMEDGRERS 497
P++VF++E + RE+ LSY+ ++ S+ L LL + GPNF Y +
Sbjct: 468 DDLHPKKVFMRETITRELILSYYTRISDSL--PEELRCLLGEQPSGPNFVY-------EN 518
Query: 498 EEHAL---SAELTNKVKGRQTAREI-IVWVEESVYPIHGLGVTIKVVVQTLLDIGSKSFT 553
E H L S+++ ++ + E+ I+ E + + +++V+ +GS+SF+
Sbjct: 519 ETHPLYQQSSQIIEALRLHKPLEELDIILQSEEIQ--NSETSAVRLVMSCAYSLGSRSFS 576
Query: 554 HLITVLERYGQVISKICPDH-DKQLMLIEEVSLFWKNNTQNAAISIDRMMGYRLISNLAI 612
H + V E++ + D ++ +++E+ FWK NA + +D+M+ Y +IS +I
Sbjct: 577 HALNVFEKHLNTLKHFSRKSLDSEIEVVDELFSFWKLQPFNAVMWLDKMLNYSIISITSI 636
Query: 613 VRWVFSPENIDQFHASDRPWEVLRNAVSKTYNRICDLRKEIISLKKGVTLAEEA 666
+ W+ + + W + V+ T+N++ + +S K+ +L EA
Sbjct: 637 IEWLIKQDV--TIWSRSYTWSL----VNTTFNKLAARLRRSVSNKEDSSLINEA 684
>sp|P34160|NCBP1_YEAST Nuclear cap-binding protein complex subunit 1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=STO1 PE=1
SV=2
Length = 861
Score = 86.7 bits (213), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 139/311 (44%), Gaps = 36/311 (11%)
Query: 344 FRYEYLMAETIFSQLLLLPQPPFKPIYYTLVIMDLCKALPGAFPAVVAGAVRALFDKIAD 403
F+ E L ETI + LP Y+ +++D+C+ P A V A R + +
Sbjct: 412 FKIEDLAIETILGLIFKLPSVSQPFAYFYTLLVDICQNSPKAIAPVFGRAFRFFYSHLDS 471
Query: 404 LDMECRIRFILWFSHHLSNFQFIWPWEEW---AYVLDLPKWAPQRVFVQEVLEREVRL-S 459
LD E ++R++ WFS +SNF F W W EW + + P+ F + ++++E+RL S
Sbjct: 472 LDFELKLRYLDWFSIQMSNFNFSWKWNEWEDDSIKFGKYFYNPKVNFAKNLIQKELRLTS 531
Query: 460 YWDKVKQSI--ENAPALE-ELLPPKGGPNFKYSMEDGRERSEEHALSAELTNKVKG---R 513
+ +V+ S+ E L+ +P N+ S+ G E+ +L + +G
Sbjct: 532 NFSEVEDSLPQEFTKYLDTSYIPRDQLINYYQSLFTGYTVEEDSVRKNDLYFRQEGVPME 591
Query: 514 QTAREIIVWVEES-----VYPIHG-LG---------------VTIKVVVQTLLDIGSKSF 552
T R+I+ + ++ V + LG I ++VQ + D GS+S
Sbjct: 592 NTVRKILDYTHKANNSREVTELESILGELKNEYGSIISDFNRFVIILLVQAVTDSGSRSL 651
Query: 553 TH----LITVLERYGQVISKICPD-HDKQLMLIEEVSLFWKNNTQNAAISIDRMMGYRLI 607
+H + + E + +KI D K+ ++IE V FW N Q + D L+
Sbjct: 652 SHANKYINDLKEDLKTIFAKIELDIETKEYIIIEAVLTFWNANPQTGFLVADAFKYAGLL 711
Query: 608 SNLAIVRWVFS 618
++ I ++F+
Sbjct: 712 TSRTIFTFIFN 722
>sp|Q754H6|NCBP1_ASHGO Nuclear cap-binding protein complex subunit 1 OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=CBC1 PE=3 SV=2
Length = 860
Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 139/335 (41%), Gaps = 78/335 (23%)
Query: 344 FRYEYLMAETIFSQLLLLPQPPFKPIYYTLVIMDLCKALPGAFPAVVAGAVRALFDKIAD 403
++ E L E I + LP Y+ +++++C+ P A V A R ++ + +
Sbjct: 413 YKIEDLAIENILGLIFKLPTVTQSFAYFYTLLVEICQNSPKAIAPVFGRAFRLFYNNLDN 472
Query: 404 LDMECRIRFILWFSHHLSNFQFIWPWEEW---AYVLDLPKWAPQRVFVQEVLEREVRLSY 460
+D E ++R++ WFS +SNF F W W EW + + P+ F + ++ +E+RL+
Sbjct: 473 MDHELKMRYLDWFSIQMSNFNFSWKWNEWEQDSIAFSKSFYNPKITFAKNLIRKELRLT- 531
Query: 461 WDKVKQSIENAPALEELLPPKGGPNFKYSMEDGRERSEEHALSAELTNKVKGRQTAREII 520
N P +E+ L P+ FK + D S++ L++ + +G E+I
Sbjct: 532 --------SNRPDVEDSLTPE----FKQYL-DASYISKDQ-LASYYQSFFEGFSFDPEVI 577
Query: 521 ----VWVEESVYPI---------------------------------HGLGV------TI 537
+ + V+P HG + T+
Sbjct: 578 KDNDLLFKNEVFPFHEKVQLILDYIHKQPLEKNISELESLLEDIKSAHGDKIPDFNRFTV 637
Query: 538 KVVVQTLLDIGSKSFTH-----------LITVLERYGQVISKICPDHDKQLMLIEEVSLF 586
+++Q L+ G++S +H L+T+LE+ P K+ +IE V +
Sbjct: 638 TLLIQALVYSGNRSLSHANKYISDAKSDLVTILEKME------VPPEVKEQWIIEAVIRY 691
Query: 587 WKNNTQNAAISIDRMMGYRLISNLAIVRWVFSPEN 621
W N+QN + +D L++ +I+ + + N
Sbjct: 692 WNCNSQNGFLIVDSFKHSELVTAKSILTFSLTDLN 726
>sp|A4D0S4|LAMB4_HUMAN Laminin subunit beta-4 OS=Homo sapiens GN=LAMB4 PE=2 SV=1
Length = 1761
Score = 35.0 bits (79), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 12/131 (9%)
Query: 646 ICDLRKEIISLKKGVTLAEEAAAKAKAELEAAESKLSLVDGEPVLGGNPARLSRLKLHAE 705
I L I +KK V AE + K+ELE A+ + L DG +L ++L+ H +
Sbjct: 1590 ITQLTANITKIKKNVLQAENQTREMKSELELAKQRSGLEDGLSLL------QTKLQRHQD 1643
Query: 706 KAKNEEISAKESLEAKEALFARAVEENEALYLSLYRNFSNVLMERLPDASRAGTLQDLKS 765
A N ++ A ES + + + E + Y L R S + + G ++ LK
Sbjct: 1644 HAVNAKVQA-ESAQHQAGSLEKEFVELKKQYAILQRKTSTTGLTK----ETLGKVKQLKD 1698
Query: 766 THADAMAVDLE 776
A+ +A D E
Sbjct: 1699 A-AEKLAGDTE 1708
>sp|Q6PGW3|CJ076_DANRE UPF0668 protein C10orf76 homolog OS=Danio rerio GN=zgc:63733 PE=2
SV=2
Length = 689
Score = 34.3 bits (77), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 43/103 (41%), Gaps = 28/103 (27%)
Query: 680 KLSLVDGEPVLGGNPARLSRLKLHAEKAKNEEISAKESLEAKEALFAR------------ 727
KLS+VD EP L G L + HA N + KE E + F+
Sbjct: 231 KLSIVDDEPTLDG----LGMVIHHALTEYNRQYKEKEE-ENQGGFFSTLSSMVGSMFIAD 285
Query: 728 -----AVEENEALYLSLY------RNFSNVLMERLPDASRAGT 759
+V+ NEA+ L+LY RNF VL + P+ A T
Sbjct: 286 ADEKLSVQTNEAILLALYEAVHLNRNFITVLAQSHPEIDMAAT 328
>sp|P23098|DYHC_TRIGR Dynein beta chain, ciliary OS=Tripneustes gratilla PE=1 SV=1
Length = 4466
Score = 33.5 bits (75), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 13/82 (15%)
Query: 639 VSKTYNRICDLRKEIISLKKGVTLAEEAAAKAKAELEAAESKLSLVDGEPVLGGNPARLS 698
+ K YN CD+ + I+L+ KA EL+AA+ KL+L+ + + A L+
Sbjct: 3252 IVKFYNVYCDVEPKRIALQ-----------KANDELKAAQDKLALIKAK--IAELDANLA 3298
Query: 699 RLKLHAEKAKNEEISAKESLEA 720
L EKA ++++ ++ EA
Sbjct: 3299 ELTAQFEKATSDKLKCQQEAEA 3320
>sp|P39057|DYHC_HELCR Dynein beta chain, ciliary OS=Heliocidaris crassispina PE=1 SV=1
Length = 4466
Score = 33.5 bits (75), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 13/82 (15%)
Query: 639 VSKTYNRICDLRKEIISLKKGVTLAEEAAAKAKAELEAAESKLSLVDGEPVLGGNPARLS 698
+ K YN CD+ + I+L+ KA EL+AA+ KL+L+ + + A L+
Sbjct: 3252 IVKFYNVYCDVEPKRIALQ-----------KANDELKAAQDKLALIKAK--IAELDANLA 3298
Query: 699 RLKLHAEKAKNEEISAKESLEA 720
L EKA ++++ ++ EA
Sbjct: 3299 ELTAQFEKATSDKLKCQQEAEA 3320
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 325,148,509
Number of Sequences: 539616
Number of extensions: 14040899
Number of successful extensions: 39777
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 71
Number of HSP's that attempted gapping in prelim test: 39549
Number of HSP's gapped (non-prelim): 148
length of query: 864
length of database: 191,569,459
effective HSP length: 126
effective length of query: 738
effective length of database: 123,577,843
effective search space: 91200448134
effective search space used: 91200448134
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)