Query 002934
Match_columns 864
No_of_seqs 387 out of 1537
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 07:06:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002934.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002934hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ooi_A Histone-lysine N-methyl 100.0 1.4E-42 4.9E-47 360.5 15.1 201 598-847 16-229 (232)
2 3bo5_A Histone-lysine N-methyl 100.0 5E-41 1.7E-45 359.5 17.7 191 649-849 56-285 (290)
3 3ope_A Probable histone-lysine 100.0 8.8E-41 3E-45 344.7 18.3 187 614-848 20-212 (222)
4 3h6l_A Histone-lysine N-methyl 100.0 6.9E-39 2.4E-43 341.2 15.4 145 703-847 105-254 (278)
5 1mvh_A Cryptic LOCI regulator 100.0 5.7E-38 2E-42 337.1 16.0 146 702-847 124-295 (299)
6 3hna_A Histone-lysine N-methyl 100.0 9.2E-38 3.1E-42 333.8 13.7 140 702-847 134-286 (287)
7 1ml9_A Histone H3 methyltransf 100.0 5.5E-37 1.9E-41 329.6 14.1 146 702-847 120-299 (302)
8 2r3a_A Histone-lysine N-methyl 100.0 3.8E-36 1.3E-40 323.1 14.9 146 702-847 127-297 (300)
9 2w5y_A Histone-lysine N-methyl 100.0 5.4E-34 1.8E-38 288.9 11.8 145 703-847 40-189 (192)
10 3f9x_A Histone-lysine N-methyl 100.0 3.1E-32 1.1E-36 267.2 12.7 131 704-834 19-155 (166)
11 2f69_A Histone-lysine N-methyl 99.9 1.1E-27 3.8E-32 253.0 13.7 117 714-834 108-235 (261)
12 1h3i_A Histone H3 lysine 4 spe 99.9 5.7E-26 2E-30 242.0 12.1 117 714-834 162-289 (293)
13 1n3j_A A612L, histone H3 lysin 99.9 1.3E-26 4.5E-31 216.8 6.2 107 714-833 3-109 (119)
14 2qpw_A PR domain zinc finger p 99.9 7.3E-26 2.5E-30 221.1 8.5 117 703-833 18-145 (149)
15 3s8p_A Histone-lysine N-methyl 99.9 1.5E-23 5E-28 222.5 2.2 122 722-848 143-267 (273)
16 3rq4_A Histone-lysine N-methyl 99.8 5.2E-21 1.8E-25 200.7 5.3 115 723-843 116-233 (247)
17 3ep0_A PR domain zinc finger p 99.8 2.7E-19 9.3E-24 178.4 9.2 112 712-833 24-147 (170)
18 3db5_A PR domain zinc finger p 99.7 3.9E-18 1.3E-22 166.8 10.9 122 703-833 12-143 (151)
19 3dal_A PR domain zinc finger p 99.7 1.8E-18 6.3E-23 175.8 7.0 110 712-831 55-175 (196)
20 3ray_A PR domain-containing pr 99.6 3.9E-15 1.3E-19 155.0 8.7 105 712-830 69-183 (237)
21 3ihx_A PR domain zinc finger p 99.5 8.5E-15 2.9E-19 143.6 6.3 102 714-831 22-140 (152)
22 3qwp_A SET and MYND domain-con 98.2 5.6E-07 1.9E-11 100.7 4.5 44 785-832 200-243 (429)
23 3n71_A Histone lysine methyltr 98.2 7E-07 2.4E-11 101.8 4.6 44 786-831 200-254 (490)
24 3qww_A SET and MYND domain-con 98.0 2E-06 6.9E-11 96.5 4.2 43 786-832 201-243 (433)
25 2llk_A Cyclin-D-binding MYB-li 96.4 0.0022 7.4E-08 55.8 3.7 51 169-222 18-68 (73)
26 3qxy_A N-lysine methyltransfer 96.2 0.0027 9.2E-08 71.7 4.1 41 787-831 223-263 (449)
27 2h21_A Ribulose-1,5 bisphospha 96.1 0.0027 9.3E-08 71.0 3.5 45 787-831 190-241 (440)
28 2cqr_A RSGI RUH-043, DNAJ homo 95.6 0.013 4.4E-07 50.9 5.2 53 170-222 14-68 (73)
29 2lr8_A CAsp8-associated protei 94.1 0.0039 1.3E-07 53.5 0.0 47 176-222 16-62 (70)
30 3smt_A Histone-lysine N-methyl 94.7 0.017 5.8E-07 66.2 4.0 41 787-830 273-313 (497)
31 2cu7_A KIAA1915 protein; nucle 94.6 0.041 1.4E-06 47.0 5.2 53 170-225 5-58 (72)
32 2yqk_A Arginine-glutamic acid 94.2 0.062 2.1E-06 45.1 5.3 44 497-541 9-52 (63)
33 2yum_A ZZZ3 protein, zinc fing 94.0 0.049 1.7E-06 46.7 4.4 53 170-222 4-61 (75)
34 2crg_A Metastasis associated p 94.0 0.068 2.3E-06 45.8 5.2 44 497-541 8-51 (70)
35 2eqr_A N-COR1, N-COR, nuclear 93.9 0.077 2.6E-06 44.1 5.3 43 497-541 12-54 (61)
36 2din_A Cell division cycle 5-l 93.7 0.056 1.9E-06 45.3 4.2 52 169-223 4-55 (66)
37 1x41_A Transcriptional adaptor 93.7 0.047 1.6E-06 45.1 3.6 48 173-222 7-55 (60)
38 3sjm_A Telomeric repeat-bindin 93.4 0.054 1.9E-06 45.6 3.5 49 173-223 10-61 (64)
39 2d9a_A B-MYB, MYB-related prot 93.2 0.055 1.9E-06 44.5 3.3 50 171-222 5-55 (60)
40 1guu_A C-MYB, MYB proto-oncoge 93.2 0.066 2.3E-06 42.6 3.6 46 174-221 3-49 (52)
41 2elk_A SPCC24B10.08C protein; 93.0 0.069 2.4E-06 43.9 3.6 45 174-220 9-55 (58)
42 2cjj_A Radialis; plant develop 92.4 0.091 3.1E-06 47.6 3.8 50 174-223 8-59 (93)
43 2cqq_A RSGI RUH-037, DNAJ homo 92.4 0.095 3.3E-06 45.3 3.7 50 174-223 8-58 (72)
44 1ug2_A 2610100B20RIK gene prod 91.9 0.091 3.1E-06 47.5 3.1 47 176-222 35-82 (95)
45 1w0t_A Telomeric repeat bindin 91.4 0.14 4.8E-06 41.1 3.5 47 174-222 2-51 (53)
46 2k9n_A MYB24; R2R3 domain, DNA 91.0 0.22 7.6E-06 45.4 4.8 48 173-223 52-100 (107)
47 3osg_A MYB21; transcription-DN 90.8 0.17 5.8E-06 47.5 4.0 51 170-223 58-109 (126)
48 1gvd_A MYB proto-oncogene prot 90.6 0.14 4.7E-06 40.9 2.7 46 174-221 3-49 (52)
49 1gv2_A C-MYB, MYB proto-oncoge 90.2 0.19 6.6E-06 45.4 3.7 51 170-223 52-103 (105)
50 2iw5_B Protein corest, REST co 90.1 0.27 9.2E-06 51.1 5.0 44 497-542 133-176 (235)
51 3h6l_A Histone-lysine N-methyl 89.6 0.15 5.3E-06 54.3 2.9 38 616-653 63-111 (278)
52 2yus_A SWI/SNF-related matrix- 89.4 0.13 4.3E-06 45.2 1.7 47 173-222 17-64 (79)
53 4a69_C Nuclear receptor corepr 88.9 0.5 1.7E-05 42.7 5.2 43 497-541 43-85 (94)
54 2dim_A Cell division cycle 5-l 87.7 0.35 1.2E-05 40.9 3.3 48 173-222 8-56 (70)
55 1ity_A TRF1; helix-turn-helix, 87.2 0.39 1.3E-05 40.5 3.3 51 171-223 7-60 (69)
56 2ltp_A Nuclear receptor corepr 87.1 0.12 4E-06 46.2 0.0 51 170-223 12-63 (89)
57 1h8a_C AMV V-MYB, MYB transfor 87.1 0.34 1.2E-05 45.4 3.1 50 171-223 76-126 (128)
58 2yus_A SWI/SNF-related matrix- 85.3 1.4 4.7E-05 38.6 5.9 43 497-541 18-60 (79)
59 2cu7_A KIAA1915 protein; nucle 84.7 1.7 5.7E-05 37.0 6.0 40 497-538 9-48 (72)
60 2k9n_A MYB24; R2R3 domain, DNA 84.6 0.59 2E-05 42.5 3.4 46 174-221 1-47 (107)
61 1x41_A Transcriptional adaptor 84.5 1.6 5.4E-05 35.8 5.6 40 497-538 8-48 (60)
62 3zqc_A MYB3; transcription-DNA 83.8 0.98 3.4E-05 42.5 4.6 51 171-224 51-102 (131)
63 1gv2_A C-MYB, MYB proto-oncoge 83.7 0.54 1.9E-05 42.4 2.7 46 174-221 4-50 (105)
64 2yum_A ZZZ3 protein, zinc fing 81.9 1.7 6E-05 37.0 5.0 40 497-538 8-53 (75)
65 1h89_C C-MYB, MYB proto-oncoge 81.8 0.76 2.6E-05 44.5 3.0 51 170-223 106-157 (159)
66 2elk_A SPCC24B10.08C protein; 81.5 2.1 7.2E-05 35.0 5.1 40 497-538 9-50 (58)
67 1h8a_C AMV V-MYB, MYB transfor 80.4 1.2 4E-05 41.7 3.7 52 169-222 22-74 (128)
68 3osg_A MYB21; transcription-DN 80.4 0.93 3.2E-05 42.5 3.0 47 172-221 9-56 (126)
69 1ign_A Protein (RAP1); RAP1,ye 79.3 0.84 2.9E-05 47.9 2.5 52 173-224 7-62 (246)
70 1guu_A C-MYB, MYB proto-oncoge 79.2 2.8 9.5E-05 33.1 5.1 40 497-538 3-43 (52)
71 2xag_B REST corepressor 1; ami 79.0 1.7 5.9E-05 49.7 5.2 44 497-542 380-423 (482)
72 2cqr_A RSGI RUH-043, DNAJ homo 77.2 3.9 0.00013 35.4 5.7 43 495-539 16-62 (73)
73 2d9a_A B-MYB, MYB-related prot 75.7 4.4 0.00015 33.0 5.4 40 497-538 8-48 (60)
74 1wgx_A KIAA1903 protein; MYB D 74.5 1.4 4.7E-05 38.4 2.1 47 176-222 10-58 (73)
75 1mvh_A Cryptic LOCI regulator 73.1 1.9 6.4E-05 46.3 3.3 37 617-653 67-131 (299)
76 1gvd_A MYB proto-oncogene prot 72.6 4.9 0.00017 31.7 4.8 40 497-538 3-43 (52)
77 1x58_A Hypothetical protein 49 70.7 3 0.0001 35.3 3.2 49 173-223 7-58 (62)
78 2dim_A Cell division cycle 5-l 69.4 7.5 0.00026 32.6 5.5 40 497-538 9-49 (70)
79 3hna_A Histone-lysine N-methyl 69.2 2 6.7E-05 45.9 2.3 39 615-653 79-141 (287)
80 1h89_C C-MYB, MYB proto-oncoge 68.1 3.3 0.00011 40.0 3.5 49 172-222 56-105 (159)
81 2ltp_A Nuclear receptor corepr 70.4 1.1 3.9E-05 39.7 0.0 42 496-539 15-56 (89)
82 1w0t_A Telomeric repeat bindin 66.8 6 0.00021 31.4 4.2 29 498-526 3-32 (53)
83 2llk_A Cyclin-D-binding MYB-li 65.3 4.6 0.00016 34.9 3.5 40 496-538 22-61 (73)
84 2eqr_A N-COR1, N-COR, nuclear 65.0 5.1 0.00017 33.0 3.5 48 172-222 10-58 (61)
85 3sjm_A Telomeric repeat-bindin 64.9 9.8 0.00034 31.8 5.3 45 497-541 11-59 (64)
86 1ity_A TRF1; helix-turn-helix, 64.8 6.5 0.00022 32.9 4.2 45 497-541 10-58 (69)
87 3qww_A SET and MYND domain-con 63.7 4.9 0.00017 44.9 4.3 31 714-744 6-36 (433)
88 2din_A Cell division cycle 5-l 63.5 8.7 0.0003 31.8 4.7 39 496-537 8-46 (66)
89 2ckx_A NGTRF1, telomere bindin 61.9 5 0.00017 35.5 3.1 46 176-223 2-52 (83)
90 2y9y_A Imitation switch protei 60.3 6.2 0.00021 43.8 4.2 48 174-221 228-289 (374)
91 2aje_A Telomere repeat-binding 60.0 9.1 0.00031 35.3 4.6 49 173-223 12-65 (105)
92 3n71_A Histone lysine methyltr 59.5 6.7 0.00023 44.6 4.4 31 714-744 6-36 (490)
93 3bo5_A Histone-lysine N-methyl 58.8 5.9 0.0002 42.2 3.6 21 615-635 58-80 (290)
94 3qwp_A SET and MYND domain-con 58.0 7.3 0.00025 43.3 4.4 30 714-743 4-33 (429)
95 2juh_A Telomere binding protei 56.0 8 0.00027 36.6 3.6 50 172-223 15-69 (121)
96 2xus_A Breast cancer metastasi 55.3 8.4 0.00029 31.1 3.0 31 22-52 13-43 (49)
97 2cjj_A Radialis; plant develop 53.8 18 0.00061 32.6 5.3 42 497-540 8-53 (93)
98 2roh_A RTBP1, telomere binding 52.8 9.3 0.00032 36.2 3.4 51 173-223 30-83 (122)
99 1ofc_X ISWI protein; nuclear p 52.6 11 0.00039 40.7 4.5 49 173-221 211-273 (304)
100 2l9z_A PR domain zinc finger p 52.6 5.4 0.00019 30.8 1.5 21 251-271 6-29 (39)
101 3hm5_A DNA methyltransferase 1 51.4 13 0.00044 33.7 4.0 46 175-223 31-82 (93)
102 3ope_A Probable histone-lysine 51.3 6.5 0.00022 40.1 2.3 42 612-653 24-67 (222)
103 2xag_B REST corepressor 1; ami 50.0 3.4 0.00012 47.3 0.0 43 497-541 189-231 (482)
104 1ml9_A Histone H3 methyltransf 48.0 7.2 0.00025 41.7 2.2 19 616-634 47-68 (302)
105 2lua_A Protein MALE-specific l 41.9 13 0.00043 30.4 2.1 19 660-678 19-37 (52)
106 3smt_A Histone-lysine N-methyl 37.4 21 0.00073 40.7 4.0 32 716-747 94-125 (497)
107 1wgx_A KIAA1903 protein; MYB D 36.8 55 0.0019 28.3 5.5 44 496-541 7-54 (73)
108 1rju_V Metallothionein; Cu(I)- 36.4 26 0.00089 25.8 2.8 12 637-648 15-26 (36)
109 1x58_A Hypothetical protein 49 35.2 29 0.00099 29.3 3.4 28 497-524 8-35 (62)
110 2iw5_B Protein corest, REST co 34.7 26 0.0009 36.5 3.7 47 174-223 133-180 (235)
111 1fex_A TRF2-interacting telome 32.9 32 0.0011 28.3 3.3 45 175-219 3-55 (59)
112 2cqq_A RSGI RUH-037, DNAJ homo 32.7 88 0.003 26.7 6.1 42 497-541 8-53 (72)
113 1pft_A TFIIB, PFTFIIBN; N-term 31.8 44 0.0015 26.1 3.8 34 144-178 12-49 (50)
114 3zqc_A MYB3; transcription-DNA 31.5 46 0.0016 31.0 4.6 42 497-540 54-95 (131)
115 3qxy_A N-lysine methyltransfer 31.2 36 0.0012 38.2 4.4 34 715-748 38-72 (449)
116 3lcn_C MRNA transport factor G 28.0 75 0.0026 22.8 3.9 21 28-48 5-25 (29)
117 3ooi_A Histone-lysine N-methyl 25.0 24 0.00082 36.2 1.5 26 627-652 59-85 (232)
118 1ofc_X ISWI protein; nuclear p 23.4 59 0.002 35.2 4.1 44 497-542 110-154 (304)
119 2ckx_A NGTRF1, telomere bindin 22.7 82 0.0028 27.7 4.2 27 499-525 2-29 (83)
120 1wvo_A Sialic acid synthase; a 21.0 30 0.001 30.0 1.1 17 812-828 8-24 (79)
No 1
>3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens}
Probab=100.00 E-value=1.4e-42 Score=360.47 Aligned_cols=201 Identities=30% Similarity=0.556 Sum_probs=170.7
Q ss_pred CCcchhhcccCCcc--------CCcCCcCCCCCCCCCCCCcccCCCccccCCCCCCccccccccCcccCCCCccCCCccc
Q 002934 598 HPSIWKRIADGKNQ--------SCKQYTPCGCQSMCGKQCPCLHNGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPC 669 (864)
Q Consensus 598 ~p~~~kri~~~k~~--------~~~~y~PC~c~~~C~~~C~C~~~g~~Ce~~CgC~~~C~nRf~GC~C~~~~C~t~~CpC 669 (864)
.||.|++|+..+.. ...+...|+|... ++..|+|+.+|.||+.
T Consensus 16 ~pp~y~~i~~n~~~~~~~~~~~~~~~~~~C~C~~~-------------~~~~C~~~~~C~nr~~---------------- 66 (232)
T 3ooi_A 16 KPPPYKHIKVNRPIGRVQIFTADLSEIPRCNCKAT-------------DENPCGIDSECINRML---------------- 66 (232)
T ss_dssp SCCCCEECSSCEECTTCCCCCCCGGGSCCCSCCTT-------------SSSTTCTTSCCHHHHT----------------
T ss_pred CCCCceEeeccccccccccccCCcccCCcccccCC-------------CCCCCCCCCCCcCcCc----------------
Confidence 57778888764421 1123445555432 4667999999999975
Q ss_pred ccccCccCcccCcCcccCCCCCCCCCCCCCCCCCCCchhhhhcccCcEEEEecCCCCceeeeccccCCCCeeeEeccccc
Q 002934 670 FAAGRECDPDVCRNCWVSCGDGSLGEPPKRGDGQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNSVSKNDYLGEYTGELI 749 (864)
Q Consensus 670 ~~a~rECdPd~C~~C~~sCg~g~l~~p~~~~~~~C~N~~lqrg~~~~l~V~kS~~kG~GLfA~edI~KGefI~EY~GEVI 749 (864)
.+||+|..|. |+ ..|+|+.+|++...+|+|++++.+||||||+++|++|+||+||+||||
T Consensus 67 ---~~EC~~~~C~-c~----------------~~C~Nr~~q~~~~~~lev~~t~~kG~Gl~A~~~I~~G~~I~ey~Gevi 126 (232)
T 3ooi_A 67 ---LYECHPTVCP-AG----------------GRCQNQCFSKRQYPEVEIFRTLQRGWGLRTKTDIKKGEFVNEYVGELI 126 (232)
T ss_dssp ---TBCCCTTTCT-TG----------------GGCCCCHHHHTCCCCEEEEECSSSSEEEEESSCBCTTCEEEECCEEEE
T ss_pred ---eeEeCCCCCC-CC----------------CCcCCccccCCCCccEEEEEcCCceeEEEECceecCCceeeEeeeecc
Confidence 5888887775 32 379999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHhhhhhccc--CccccccCCCcEEEeccccCCccccccCCCCCCcceeEEEEcCeeEEEEEEccCCCCCCeEEE
Q 002934 750 SHREADKRGKIYDRA--NSSFLFDLNDQYVLDAYRKGDKLKFANHSSNPNCFAKVMLVAGDHRVGIFAKEHIEASEELFY 827 (864)
Q Consensus 750 s~~Ea~rR~k~yd~~--~~sYlf~L~~~~~IDAt~~GN~aRFINHSC~PNc~~~~~~V~G~~RI~~fA~RDI~aGEELTf 827 (864)
+..++++|...+... ...|+|.++.+++|||+.+||++|||||||+|||.++.|.+++.++|+|||+|||++||||||
T Consensus 127 ~~~e~~~r~~~~~~~~~~~~y~~~l~~~~~IDa~~~Gn~aRfiNHSC~PN~~~~~~~~~~~~~i~~~A~RdI~~GEELT~ 206 (232)
T 3ooi_A 127 DEEECRARIRYAQEHDITNFYMLTLDKDRIIDAGPKGNYARFMNHCCQPNCETQKWSVNGDTRVGLFALSDIKAGTELTF 206 (232)
T ss_dssp CHHHHHHHHHHHHHTTCCCCCEEEEETTEEEEEEEEECGGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCBCEE
T ss_pred CHHHHHHHHHHHhhcCCCceeeeecCcceEEeccccccccccccccCCCCeEEEEEEECCceEEEEEECCccCCCCEEEE
Confidence 999999997766543 357889999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCC---CCCCcccCCCCCCC
Q 002934 828 DYRYGP---DQAPAWARKPEGSK 847 (864)
Q Consensus 828 DYgy~~---d~~pcwC~~pe~~~ 847 (864)
||++.. ...+|+|+.++|+.
T Consensus 207 dY~~~~~~~~~~~C~CGs~~CrG 229 (232)
T 3ooi_A 207 NYNLECLGNGKTVCKCGAPNCSG 229 (232)
T ss_dssp CCTTCSTTCTTCBCCCCCTTCCS
T ss_pred ECCCCcCCCCCcEeECCCCcCcC
Confidence 999654 45899999999984
No 2
>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens}
Probab=100.00 E-value=5e-41 Score=359.47 Aligned_cols=191 Identities=25% Similarity=0.491 Sum_probs=169.0
Q ss_pred cccccCcccCCCCccCCCcccccccCccCcccCc--------------CcccCCCCCCCCCCCCCCCCCCCchhhhhccc
Q 002934 649 KNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCR--------------NCWVSCGDGSLGEPPKRGDGQCGNMRLLLRQQ 714 (864)
Q Consensus 649 ~nRf~GC~C~~~~C~t~~CpC~~a~rECdPd~C~--------------~C~~sCg~g~l~~p~~~~~~~C~N~~lqrg~~ 714 (864)
.++|+||.|..+.|.+..|+|++.+.+|+++.|. +|+..|+|+ ..|.|+.+|++.+
T Consensus 56 ~~~~~gC~C~~~~C~~~~C~C~~~~~~y~~~~~l~~~~~~~~~~~~~~EC~~~C~C~----------~~C~Nr~~q~g~~ 125 (290)
T 3bo5_A 56 QITFPGCICVKTPCLPGTCSCLRHGENYDDNSCLRDIGSGGKYAEPVFECNVLCRCS----------DHCRNRVVQKGLQ 125 (290)
T ss_dssp SCCCCCCCCCSSCCCTTTCGGGTTSCSBCTTSCBCC-----CCCCCEECCCTTCCSC----------TTCTTCCGGGCCC
T ss_pred cccCCCCCCCCCCcCCCCCcchhhcCccCccccccccccccccCCceEeCCCCCCCC----------CCCCCeEcccCCc
Confidence 4568899998888998899999998889887764 566777664 4899999999999
Q ss_pred CcEEEEecCCCCceeeeccccCCCCeeeEecccccCHHHHHHhhhhhcccCccccccCCC--------cEEEeccccCCc
Q 002934 715 QRILLAKSDVAGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLND--------QYVLDAYRKGDK 786 (864)
Q Consensus 715 ~~l~V~kS~~kG~GLfA~edI~KGefI~EY~GEVIs~~Ea~rR~k~yd~~~~sYlf~L~~--------~~~IDAt~~GN~ 786 (864)
.+|+|++++.+||||||+++|++|+||+||+||||+..|+++|...|+....+|+|.++. .++|||+.+||+
T Consensus 126 ~~l~V~~s~~~G~Gl~A~~~I~~G~~I~EY~Gevi~~~e~~~R~~~~~~~~~~Y~~~l~~~~~~~~~~~~~IDa~~~GN~ 205 (290)
T 3bo5_A 126 FHFQVFKTHKKGWGLRTLEFIPKGRFVCEYAGEVLGFSEVQRRIHLQTKSDSNYIIAIREHVYNGQVMETFVDPTYIGNI 205 (290)
T ss_dssp SCEEEEECSSSSEEEEESSCBCTTCEEEECCEEEECHHHHHHHHTTCCSSCCCCCEEEEECC-----EEEEEEEEEEECG
T ss_pred ccEEEEEcCCCcceEeECCccCCCCEEEEEeeEEeCHHHHHHHHHhhcccCCcceeeecccccCCccceeEEeeeecCCc
Confidence 999999999999999999999999999999999999999999988887777889998753 378999999999
Q ss_pred cccccCCCCCCcceeEEEEcC-eeEEEEEEccCCCCCCeEEEecCCCC----------------CCCCcccCCCCCCCCC
Q 002934 787 LKFANHSSNPNCFAKVMLVAG-DHRVGIFAKEHIEASEELFYDYRYGP----------------DQAPAWARKPEGSKRE 849 (864)
Q Consensus 787 aRFINHSC~PNc~~~~~~V~G-~~RI~~fA~RDI~aGEELTfDYgy~~----------------d~~pcwC~~pe~~~~d 849 (864)
+|||||||+|||.++.|.+++ .++|+|||+|||++||||||||++.. ...+|+||.++|+..-
T Consensus 206 arfiNHSC~PN~~~~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~~~~~~~~~~~~~~~~~~~~~~~C~CGs~~CrG~l 285 (290)
T 3bo5_A 206 GRFLNHSCEPNLLMIPVRIDSMVPKLALFAAKDIVPEEELSYDYSGRYLNLTVSASKERLDHGKLRKPCYCGAKSCTAFL 285 (290)
T ss_dssp GGGCEECSSCSEEEEEEESSSSSCEEEEEESSCBCTTCEEEECTTSCTTCCSSSEEEEEEECSSCCCBCCCCCTTCCSBC
T ss_pred hheeeecCCCCEEEEEEEeCCCceEEEEEEccccCCCCEEEEECCCccccccccccccccccCCCCccccCCCcCCCccC
Confidence 999999999999998888876 58999999999999999999998542 2468999999998653
No 3
>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens}
Probab=100.00 E-value=8.8e-41 Score=344.67 Aligned_cols=187 Identities=29% Similarity=0.544 Sum_probs=159.4
Q ss_pred cCCcCCCCCCCCCCCCcccCCCccccCCCCCCccccccccCcccCCCCccCCCcccccccCccCcccCcCcccCCCCCCC
Q 002934 614 KQYTPCGCQSMCGKQCPCLHNGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSL 693 (864)
Q Consensus 614 ~~y~PC~c~~~C~~~C~C~~~g~~Ce~~CgC~~~C~nRf~GC~C~~~~C~t~~CpC~~a~rECdPd~C~~C~~sCg~g~l 693 (864)
.+...|+|..++. +..|+|+.+|.||+. ..||+|+.|. |+
T Consensus 20 ~~~~~C~C~~~~~------------~~~~~c~~~C~nr~~-------------------~~EC~~~~C~-C~-------- 59 (222)
T 3ope_A 20 YEATTCNCKKPDD------------DTRKGCVDDCLNRMI-------------------FAECSPNTCP-CG-------- 59 (222)
T ss_dssp CCCCCCCCCCCSC------------SSSCSSCSCCTTGGG-------------------TBCCCTTTCT-TT--------
T ss_pred ccCccccCcCCCc------------CCCCCCcccCcCcCe-------------------EeEeCCCCCc-CC--------
Confidence 3556677765431 224677777888764 6888887775 31
Q ss_pred CCCCCCCCCCCCchhhhhcccC-cEEEEecCCCCceeeeccccCCCCeeeEecccccCHHHHHHhhh-hhcccCcccccc
Q 002934 694 GEPPKRGDGQCGNMRLLLRQQQ-RILLAKSDVAGWGAFLKNSVSKNDYLGEYTGELISHREADKRGK-IYDRANSSFLFD 771 (864)
Q Consensus 694 ~~p~~~~~~~C~N~~lqrg~~~-~l~V~kS~~kG~GLfA~edI~KGefI~EY~GEVIs~~Ea~rR~k-~yd~~~~sYlf~ 771 (864)
..|.|+++|++... +|+|++++.+||||||+++|++|+||+||+||||+.+|+.+|.. .|.....+|+|.
T Consensus 60 --------~~C~Nr~~q~~~~~~~lev~~t~~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~e~~~r~~~~~~~~~~~y~~~ 131 (222)
T 3ope_A 60 --------EQCCNQRIQRHEWVQCLERFRAEEKGWGIRTKEPLKAGQFIIEYLGEVVSEQEFRNRMIEQYHNHSDHYCLN 131 (222)
T ss_dssp --------TSCSSCTTTTTCCCSCCEEEECTTSSEEEECSSCBCTTCEEEECCSEEECHHHHHHHHHHTSTTCCSCCEEE
T ss_pred --------CCCCCceEeCCCccccEEEEEcCCCceEEEECceECCCCEEEEecceecCHHHHHHHHHHHhcccCCeEEEe
Confidence 37999999998765 59999999999999999999999999999999999999988853 455556789999
Q ss_pred CCCcEEEeccccCCccccccCCCCCCcceeEEEEcCeeEEEEEEccCCCCCCeEEEecCCCCC----CCCcccCCCCCCC
Q 002934 772 LNDQYVLDAYRKGDKLKFANHSSNPNCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYRYGPD----QAPAWARKPEGSK 847 (864)
Q Consensus 772 L~~~~~IDAt~~GN~aRFINHSC~PNc~~~~~~V~G~~RI~~fA~RDI~aGEELTfDYgy~~d----~~pcwC~~pe~~~ 847 (864)
++..++|||+.+||++|||||||+|||.++.|.+++.++|+|||+|||++||||||||++... ..+|.|+.++|+.
T Consensus 132 l~~~~~IDa~~~Gn~aRfiNHSC~PN~~~~~~~~~~~~~i~~~A~RdI~~GEELT~dY~~~~~~~~~~~~C~CGs~~Crg 211 (222)
T 3ope_A 132 LDSGMVIDSYRMGNEARFINHSCDPNCEMQKWSVNGVYRIGLYALKDMPAGTELTYDYNFHSFNVEKQQLCKCGFEKCRG 211 (222)
T ss_dssp EETTEEEECSSEECGGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECTTSSBCCCSCCCBCCCCCTTCCS
T ss_pred cCCCEEEeCccccccceeeccCCCCCeEeEEEEECCeEEEEEEECCccCCCCEEEEECCCcccCCcCCCEeeCCCcCCCC
Confidence 999999999999999999999999999999999999999999999999999999999997532 4789999999985
Q ss_pred C
Q 002934 848 R 848 (864)
Q Consensus 848 ~ 848 (864)
.
T Consensus 212 ~ 212 (222)
T 3ope_A 212 I 212 (222)
T ss_dssp B
T ss_pred c
Confidence 3
No 4
>3h6l_A Histone-lysine N-methyltransferase SETD2; SET domain-containing protein 2, S-adenos methionine, structural genomics, structural genomics consor SGC; HET: SAM; 1.99A {Homo sapiens} PDB: 4fmu_A* 4h12_A*
Probab=100.00 E-value=6.9e-39 Score=341.15 Aligned_cols=145 Identities=28% Similarity=0.548 Sum_probs=135.1
Q ss_pred CCCchhhhhcccCcEEEEecCCCCceeeeccccCCCCeeeEecccccCHHHHHHhhhhhccc--CccccccCCCcEEEec
Q 002934 703 QCGNMRLLLRQQQRILLAKSDVAGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRA--NSSFLFDLNDQYVLDA 780 (864)
Q Consensus 703 ~C~N~~lqrg~~~~l~V~kS~~kG~GLfA~edI~KGefI~EY~GEVIs~~Ea~rR~k~yd~~--~~sYlf~L~~~~~IDA 780 (864)
.|.|+.+|+++..+|+|++++.+||||||+++|++|+||+||+||||+..++++|...|... ...|+|.++.+++|||
T Consensus 105 ~C~Nr~~q~g~~~~leV~~t~~kG~Gl~A~~~I~~G~~I~EY~Gevi~~~e~~~R~~~y~~~~~~~~y~~~l~~~~~IDa 184 (278)
T 3h6l_A 105 YCSNRRFQRKQHADVEVILTEKKGWGLRAAKDLPSNTFVLEYCGEVLDHKEFKARVKEYARNKNIHYYFMALKNDEIIDA 184 (278)
T ss_dssp GCSSCTTTTTCCCCEEEEECSSSCEEEEESSCBCTTCEEEECCCEEECHHHHHHHHHHHHHTTCCCCCEEEEETTEEEEC
T ss_pred CCCCccccCCCccCEEEEEcCCCceEEEeCCccCCCCEeEEeeeeecCHHHHHHHHHHHHhccCccceeecccCCeEEeC
Confidence 79999999999999999999999999999999999999999999999999999998888654 3456778899999999
Q ss_pred cccCCccccccCCCCCCcceeEEEEcCeeEEEEEEccCCCCCCeEEEecCCCC---CCCCcccCCCCCCC
Q 002934 781 YRKGDKLKFANHSSNPNCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYRYGP---DQAPAWARKPEGSK 847 (864)
Q Consensus 781 t~~GN~aRFINHSC~PNc~~~~~~V~G~~RI~~fA~RDI~aGEELTfDYgy~~---d~~pcwC~~pe~~~ 847 (864)
+.+||++|||||||+|||.++.|.++|.++|+|||+|||++||||||||++.. ...+|+|+.++|+.
T Consensus 185 ~~~GN~aRFiNHSC~PN~~~~~~~v~g~~ri~~fA~RdI~~GEELT~dY~~~~~~~~~~~C~CGs~~Crg 254 (278)
T 3h6l_A 185 TQKGNCSRFMNHSCEPNCETQKWTVNGQLRVGFFTTKLVPSGSELTFDYQFQRYGKEAQKCFCGSANCRG 254 (278)
T ss_dssp SSEECGGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECCTTTEECSSCEECCCCCTTCCS
T ss_pred cccCChhhhcccCCCCCceeEEEEeCCceEEEEEECCccCCCCEEEEecCCCcCCCCCcEeECCCCCCee
Confidence 99999999999999999999999999999999999999999999999999753 45799999999984
No 5
>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A
Probab=100.00 E-value=5.7e-38 Score=337.11 Aligned_cols=146 Identities=28% Similarity=0.410 Sum_probs=122.6
Q ss_pred CCCCchhhhhcccCcEEEEecCCCCceeeeccccCCCCeeeEecccccCHHHHHHhhhhhcccCccccccCCC-----cE
Q 002934 702 GQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLND-----QY 776 (864)
Q Consensus 702 ~~C~N~~lqrg~~~~l~V~kS~~kG~GLfA~edI~KGefI~EY~GEVIs~~Ea~rR~k~yd~~~~sYlf~L~~-----~~ 776 (864)
..|.|+.+|++...+|+|++++.+||||||+++|++|+||+||+||||+..|+++|...|+..+.+|+|.++. .+
T Consensus 124 ~~C~Nr~~q~g~~~~l~v~~t~~~G~Gv~A~~~I~kG~~I~EY~Gevi~~~ea~~R~~~y~~~~~~Y~f~l~~~~~~~~~ 203 (299)
T 1mvh_A 124 MECPNRVVQRGRTLPLEIFKTKEKGWGVRSLRFAPAGTFITCYLGEVITSAEAAKRDKNYDDDGITYLFDLDMFDDASEY 203 (299)
T ss_dssp TTCTTCTGGGCCCSCEEEEECSSSSEEEEESSCBCTTCEEEECCCEEEEHHHHHHHHTTCCSCSCCCEEEECSSCSSSCE
T ss_pred CCcCCccccccccccEEEEEcCCCcceEeeCceeCCCCEEEEeeeEECcHHHHHHHHHhhhccCceEEEEecCCCCCccE
Confidence 3899999999999999999999999999999999999999999999999999999999998888899999874 58
Q ss_pred EEeccccCCccccccCCCCCCcceeEEEEc----CeeEEEEEEccCCCCCCeEEEecCCCCC-----------------C
Q 002934 777 VLDAYRKGDKLKFANHSSNPNCFAKVMLVA----GDHRVGIFAKEHIEASEELFYDYRYGPD-----------------Q 835 (864)
Q Consensus 777 ~IDAt~~GN~aRFINHSC~PNc~~~~~~V~----G~~RI~~fA~RDI~aGEELTfDYgy~~d-----------------~ 835 (864)
+|||+.+||++|||||||+|||.+..++++ +.++|+|||+|||++||||||||++... .
T Consensus 204 ~IDa~~~GN~aRfiNHSC~PN~~~~~v~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~~~~~~~~~~~~~~~~~~~k~~ 283 (299)
T 1mvh_A 204 TVDAQNYGDVSRFFNHSCSPNIAIYSAVRNHGFRTIYDLAFFAIKDIQPLEELTFDYAGAKDFSPVQSQKSQQNRISKLR 283 (299)
T ss_dssp EEECSSEECGGGGCEECSSCSEEEEEEESCTTCTTSCEEEEEESSCBCTTCBCEECCCTTSSSSCCC-------------
T ss_pred EEeCcccCChhheEeecCCCCeEEEEEEeecCCCCceEEEEEEccCcCCCCEEEEEcCCcccccccccccccccccccCC
Confidence 999999999999999999999988766554 3579999999999999999999986543 1
Q ss_pred CCcccCCCCCCC
Q 002934 836 APAWARKPEGSK 847 (864)
Q Consensus 836 ~pcwC~~pe~~~ 847 (864)
.+|+||.++|+.
T Consensus 284 ~~C~CGs~~Crg 295 (299)
T 1mvh_A 284 RQCKCGSANCRG 295 (299)
T ss_dssp ------------
T ss_pred cCcCCCCCCCcc
Confidence 589999999874
No 6
>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A*
Probab=100.00 E-value=9.2e-38 Score=333.84 Aligned_cols=140 Identities=31% Similarity=0.500 Sum_probs=125.5
Q ss_pred CCCCchhhhhcccCcEEEEecCCCCceeeeccccCCCCeeeEecccccCHHHHHHhhhhhcccCccccccCCCc----EE
Q 002934 702 GQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQ----YV 777 (864)
Q Consensus 702 ~~C~N~~lqrg~~~~l~V~kS~~kG~GLfA~edI~KGefI~EY~GEVIs~~Ea~rR~k~yd~~~~sYlf~L~~~----~~ 777 (864)
..|.|+.+|++...+|+|++++.+||||||+++|++|+||+||+||||+..|++.|. ..+|+|.++.. ++
T Consensus 134 ~~C~Nr~~q~g~~~~l~v~~t~~kG~Gv~A~~~I~~G~~I~eY~Gevi~~~e~~~r~------~~~Y~f~l~~~~~~~~~ 207 (287)
T 3hna_A 134 RNCRNRVVQNGLRARLQLYRTRDMGWGVRSLQDIPPGTFVCEYVGELISDSEADVRE------EDSYLFDLDNKDGEVYC 207 (287)
T ss_dssp TTCSSCSGGGCCCSCEEEEECSSSSEEEEESSCBCTTCEEEEECEEEEEHHHHHTCS------CCTTEEESCCSSSSCEE
T ss_pred CCCCCcccCcCCcccEEEEEcCCCceEEEeCcccCCCCEEEEeeeEEccHHHHhhhc------ccceEEEeccCCCceEE
Confidence 489999999999999999999999999999999999999999999999999998763 46899988754 79
Q ss_pred EeccccCCccccccCCCCCCcceeEEEEcC----eeEEEEEEccCCCCCCeEEEecCCC-----CCCCCcccCCCCCCC
Q 002934 778 LDAYRKGDKLKFANHSSNPNCFAKVMLVAG----DHRVGIFAKEHIEASEELFYDYRYG-----PDQAPAWARKPEGSK 847 (864)
Q Consensus 778 IDAt~~GN~aRFINHSC~PNc~~~~~~V~G----~~RI~~fA~RDI~aGEELTfDYgy~-----~d~~pcwC~~pe~~~ 847 (864)
|||+.+||++|||||||+||+.+..+++.+ .++|+|||+|||++||||||||++. ....+|+|+.++|+.
T Consensus 208 IDa~~~GN~aRFiNHSC~PN~~~~~v~~~~~d~~~~~i~~~A~RdI~~GEELT~dYg~~~~~~~~~~~~C~CGs~~CRg 286 (287)
T 3hna_A 208 IDARFYGNVSRFINHHCEPNLVPVRVFMAHQDLRFPRIAFFSTRLIEAGEQLGFDYGERFWDIKGKLFSCRCGSPKCRH 286 (287)
T ss_dssp EEEEEEECGGGGCEECSSCSEEEEEEESSCCCTTCCEEEEEESSCBCTTCBCEECCCHHHHHHHTTTCCCCCCCTTCSC
T ss_pred EeccccCCchheeeecCCCCceeEEEEEecCCCCceeEEEEEcceeCCCCeEEEeCCCcccccCCCcCEeeCCCCCCCC
Confidence 999999999999999999999987766543 3699999999999999999999853 245799999999874
No 7
>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A*
Probab=100.00 E-value=5.5e-37 Score=329.57 Aligned_cols=146 Identities=22% Similarity=0.367 Sum_probs=116.4
Q ss_pred CCCCchhhhhcccCcEEEEecCCCCceeeeccccCCCCeeeEecccccCHHHHHHhhhhhcc--cCccccccCCC-----
Q 002934 702 GQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDR--ANSSFLFDLND----- 774 (864)
Q Consensus 702 ~~C~N~~lqrg~~~~l~V~kS~~kG~GLfA~edI~KGefI~EY~GEVIs~~Ea~rR~k~yd~--~~~sYlf~L~~----- 774 (864)
..|.|+.+|++...+|+|++++.+||||||+++|++|+||+||+||||+.+|+++|...|.. ....|+|.|+.
T Consensus 120 ~~C~Nr~~q~g~~~~l~v~~t~~kG~Gv~A~~~I~~G~~I~EY~Gevi~~~e~~~R~~~~~~~~~~~~Y~f~l~~~~~~~ 199 (302)
T 1ml9_A 120 KDCPNRVVERGRTVPLQIFRTKDRGWGVKCPVNIKRGQFVDRYLGEIITSEEADRRRAESTIARRKDVYLFALDKFSDPD 199 (302)
T ss_dssp TTCTTCHHHHCCCSCEEEEECSSSCEEEECSSCBCTTCEEEECCCEEECHHHHHHHHHHSCGGGCHHHHEEECCSSCCSS
T ss_pred CCCCCcccccCCccceEEEEcCCCceEEEECCeeCCCCEEEEEeeEEeCHHHHHHHHHHHhhhcCCceEEEEeccccCcc
Confidence 48999999999999999999999999999999999999999999999999999999877643 34579998864
Q ss_pred ---------cEEEeccccCCccccccCCCCCCcceeEEEEc----CeeEEEEEEccCCCCCCeEEEecCCCCC-------
Q 002934 775 ---------QYVLDAYRKGDKLKFANHSSNPNCFAKVMLVA----GDHRVGIFAKEHIEASEELFYDYRYGPD------- 834 (864)
Q Consensus 775 ---------~~~IDAt~~GN~aRFINHSC~PNc~~~~~~V~----G~~RI~~fA~RDI~aGEELTfDYgy~~d------- 834 (864)
.++|||+.+||++|||||||+|||.+..+..+ +.++|+|||+|||++||||||||++...
T Consensus 200 ~~d~~~~~~~~~IDa~~~GN~arfiNHSC~PN~~~~~~~~~~~~~~~~~i~~~A~rdI~~GeELt~dY~~~~~~~~~~~~ 279 (302)
T 1ml9_A 200 SLDPLLAGQPLEVDGEYMSGPTRFINHSCDPNMAIFARVGDHADKHIHDLALFAIKDIPKGTELTFDYVNGLTGLESDAH 279 (302)
T ss_dssp SSCHHHHSCCCEEECSSEECGGGGCEECSSCSEEEEEEESSGGGGGGCEEEEEESSCBCTTCEEEECTTC----------
T ss_pred cccccccCCcEEEeCcccCCHHHhcccCCCCCeeEEEEEeccCCCCceEEEEEECCCcCCCCEEEEEECCCccccccccc
Confidence 58999999999999999999999987654432 2369999999999999999999986432
Q ss_pred -------CCCcccCCCCCCC
Q 002934 835 -------QAPAWARKPEGSK 847 (864)
Q Consensus 835 -------~~pcwC~~pe~~~ 847 (864)
..+|+||.++|+.
T Consensus 280 ~~~k~~~~~~C~CGs~~Crg 299 (302)
T 1ml9_A 280 DPSKISEMTKCLCGTAKCRG 299 (302)
T ss_dssp --------------------
T ss_pred cccccCCCcEeeCCCCcCcc
Confidence 2589999999874
No 8
>2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.8e-36 Score=323.14 Aligned_cols=146 Identities=28% Similarity=0.511 Sum_probs=133.1
Q ss_pred CCCCchhhhhcccCcEEEEecC-CCCceeeeccccCCCCeeeEecccccCHHHHHHhhhhhcccCccccccCC---CcEE
Q 002934 702 GQCGNMRLLLRQQQRILLAKSD-VAGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLN---DQYV 777 (864)
Q Consensus 702 ~~C~N~~lqrg~~~~l~V~kS~-~kG~GLfA~edI~KGefI~EY~GEVIs~~Ea~rR~k~yd~~~~sYlf~L~---~~~~ 777 (864)
..|.|+.+|++.+.+|+|+++. .+||||||.++|++|+||+||+||||+.+|+++|...|+..+.+|+|.++ ..++
T Consensus 127 ~~C~Nr~~q~g~~~~l~vfrt~~~kG~Gl~A~~~I~~G~~I~EY~Gevi~~~ea~~R~~~y~~~~~~Y~f~l~~~~~~~~ 206 (300)
T 2r3a_A 127 PDCPNRIVQKGTQYSLCIFRTSNGRGWGVKTLVKIKRMSFVMEYVGEVITSEEAERRGQFYDNKGITYLFDLDYESDEFT 206 (300)
T ss_dssp TTCTTCSGGGCCCSCEEEEECSSSCCEEEEESSCBCTTCEEEEECCEEEEHHHHHHHHHTCCHHHHHTEEECCSSCSSEE
T ss_pred CcCCCccccccccccEEEEEeCCCceEEEEeCccccCCCEeEEEeeEEecHHHHHHHHHHhhhccccEEEEeecCCceEE
Confidence 3899999999999999999986 69999999999999999999999999999999999999888889999886 5699
Q ss_pred EeccccCCccccccCCCCCCcceeEEEEc----CeeEEEEEEccCCCCCCeEEEecCCCCC-----------------CC
Q 002934 778 LDAYRKGDKLKFANHSSNPNCFAKVMLVA----GDHRVGIFAKEHIEASEELFYDYRYGPD-----------------QA 836 (864)
Q Consensus 778 IDAt~~GN~aRFINHSC~PNc~~~~~~V~----G~~RI~~fA~RDI~aGEELTfDYgy~~d-----------------~~ 836 (864)
|||+.+||++|||||||+|||.+..|.++ +.++|+|||+|||++||||||||++... ..
T Consensus 207 IDa~~~GN~aRfiNHSC~PN~~~~~v~~~~~d~~~~~i~~~A~rdI~~GEELt~dY~~~~~~~~~~~~~d~~~~~~~~~~ 286 (300)
T 2r3a_A 207 VDAARYGNVSHFVNHSCDPNLQVFNVFIDNLDTRLPRIALFSTRTINAGEELTFDYQMKGSGDISSDSIDHSPAKKRVRT 286 (300)
T ss_dssp EECSSEECGGGGCEECSSCSEEEEEEESSCCCTTSCEEEEEESSCBCTTCEEEECGGGSSCC--------------CCCC
T ss_pred EecccccChHHheecCCCCCEEEEEEEeccCCCCceEEEEEEccCCCCCCEEEEECCCCccccccccccccccccccCCC
Confidence 99999999999999999999998888775 3579999999999999999999986521 36
Q ss_pred CcccCCCCCCC
Q 002934 837 PAWARKPEGSK 847 (864)
Q Consensus 837 pcwC~~pe~~~ 847 (864)
+|+||.++|+.
T Consensus 287 ~C~CGs~~Crg 297 (300)
T 2r3a_A 287 VCKCGAVTCRG 297 (300)
T ss_dssp BCCCCCTTCCS
T ss_pred EeeCCCccccc
Confidence 89999999985
No 9
>2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A*
Probab=100.00 E-value=5.4e-34 Score=288.92 Aligned_cols=145 Identities=30% Similarity=0.548 Sum_probs=132.7
Q ss_pred CCCchhhhhcccCcEEEEecCCCCceeeeccccCCCCeeeEecccccCHHHHHHhhhhhcccC-ccccccCCCcEEEecc
Q 002934 703 QCGNMRLLLRQQQRILLAKSDVAGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRAN-SSFLFDLNDQYVLDAY 781 (864)
Q Consensus 703 ~C~N~~lqrg~~~~l~V~kS~~kG~GLfA~edI~KGefI~EY~GEVIs~~Ea~rR~k~yd~~~-~sYlf~L~~~~~IDAt 781 (864)
.|.++.+|++...+|+|++++++||||||+++|++|+||+||+||||+..++++|...|+..+ ..|+|.++..++|||+
T Consensus 40 ~~~~~~l~~~~~~~l~V~~s~~~G~GlfA~~~I~~G~~I~EY~Gevi~~~e~~~R~~~y~~~~~~~Y~f~l~~~~~IDa~ 119 (192)
T 2w5y_A 40 PMRFRHLKKTSKEAVGVYRSPIHGRGLFCKRNIDAGEMVIEYAGNVIRSIQTDKREKYYDSKGIGCYMFRIDDSEVVDAT 119 (192)
T ss_dssp HHHHTTHHHHHHHHEEEEECSSSSEEEEESSCBCTTCEEEECCSEEEEGGGHHHHHHHHHHHTCCCCEEECSSSEEEECT
T ss_pred chhHHHHhccCCCcEEEEEcCCceeEEEECcccCCCCEEEEeeeeEechHHHHHHHHHHhhcCCceeeeeecCceEEECc
Confidence 567788888888999999999999999999999999999999999999999999988887654 4799999999999999
Q ss_pred ccCCccccccCCCCCCcceeEEEEcCeeEEEEEEccCCCCCCeEEEecCCCCC----CCCcccCCCCCCC
Q 002934 782 RKGDKLKFANHSSNPNCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYRYGPD----QAPAWARKPEGSK 847 (864)
Q Consensus 782 ~~GN~aRFINHSC~PNc~~~~~~V~G~~RI~~fA~RDI~aGEELTfDYgy~~d----~~pcwC~~pe~~~ 847 (864)
..||++|||||||+|||.+..|.++|..+|+|||+|||++||||||||++... ..+|+|+.++|+.
T Consensus 120 ~~Gn~arfiNHSC~PN~~~~~~~~~g~~~i~i~A~rdI~~GEELt~dY~~~~~~~~~~~~C~Cgs~~Crg 189 (192)
T 2w5y_A 120 MHGNAARFINHSCEPNCYSRVINIDGQKHIVIFAMRKIYRGEELTYDYKFPIEDASNKLPCNCGAKKCRK 189 (192)
T ss_dssp TTCCGGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCEEEECCCC-------CCBCCCCCTTCCS
T ss_pred cccChhHhhccCCCCCEEEEEEEECCcEEEEEEECcccCCCCEEEEEcCCchhcCCCCceeECCCCCCcC
Confidence 99999999999999999999999999999999999999999999999997653 4799999999874
No 10
>3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 4ij8_A* 2bqz_A*
Probab=99.97 E-value=3.1e-32 Score=267.17 Aligned_cols=131 Identities=26% Similarity=0.431 Sum_probs=119.1
Q ss_pred CCchhhhhcccCcEEEEecCCCCceeeeccccCCCCeeeEecccccCHHHHHHhhhhhccc--Ccccccc---CCCcEEE
Q 002934 704 CGNMRLLLRQQQRILLAKSDVAGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRA--NSSFLFD---LNDQYVL 778 (864)
Q Consensus 704 C~N~~lqrg~~~~l~V~kS~~kG~GLfA~edI~KGefI~EY~GEVIs~~Ea~rR~k~yd~~--~~sYlf~---L~~~~~I 778 (864)
..++.+|++...+|+|+.++.+||||||+++|++|+||+||+|++|+..+++.|...|... ...|+|. ++..++|
T Consensus 19 ~~~~~~q~g~~~~l~v~~~~~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~~~~~r~~~~~~~~~~~~y~~~~~~~~~~~~i 98 (166)
T 3f9x_A 19 RIDELIESGKEEGMKIDLIDGKGRGVIATKQFSRGDFVVEYHGDLIEITDAKKREALYAQDPSTGCYMYYFQYLSKTYCV 98 (166)
T ss_dssp HHHHHHHHTCCTTEEEEEETTTEEEEEESSCBCTTCEEEECCSEEEEHHHHHHHHHHHTTCTTSCCCEEEEEETTEEEEE
T ss_pred HHHHHHHcCCccCeEEEECCCceeEEEECCCcCCCCEEEEeeceEcCHHHHHHHHHHHhhccCCCceEEEEecCCCCeEE
Confidence 3467789999999999999999999999999999999999999999999999999888764 2345543 6788999
Q ss_pred ecccc-CCccccccCCCCCCcceeEEEEcCeeEEEEEEccCCCCCCeEEEecCCCCC
Q 002934 779 DAYRK-GDKLKFANHSSNPNCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYRYGPD 834 (864)
Q Consensus 779 DAt~~-GN~aRFINHSC~PNc~~~~~~V~G~~RI~~fA~RDI~aGEELTfDYgy~~d 834 (864)
||+.. ||++|||||||+|||.+..+.+++.++|+|||+|||.+||||||||++...
T Consensus 99 Da~~~~Gn~aRfiNHSC~PN~~~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~~~~ 155 (166)
T 3f9x_A 99 DATRETNRLGRLINHSKCGNCQTKLHDIDGVPHLILIASRDIAAGEELLFDYGDRSK 155 (166)
T ss_dssp ECCSCCSCSGGGCEECTTCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECCCCCCH
T ss_pred echhcCCChhheeecCCCCCeeEEEEEECCeeEEEEEECCcCCCCCEEEEEcCCChh
Confidence 99996 999999999999999999999999999999999999999999999998754
No 11
>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A*
Probab=99.95 E-value=1.1e-27 Score=252.98 Aligned_cols=117 Identities=29% Similarity=0.371 Sum_probs=103.8
Q ss_pred cCcEEEEecCCC--CceeeeccccCCCCeeeEecccccCHHHHHHhhhhhcccCccccccCCCcEEEecc--------cc
Q 002934 714 QQRILLAKSDVA--GWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAY--------RK 783 (864)
Q Consensus 714 ~~~l~V~kS~~k--G~GLfA~edI~KGefI~EY~GEVIs~~Ea~rR~k~yd~~~~sYlf~L~~~~~IDAt--------~~ 783 (864)
...|+|++|.++ ||||||+++|++|+||+||+||||+..++++|...|+ .|+|.++..++|||+ .+
T Consensus 108 ~~~~~v~~S~i~~kG~GvfA~~~I~~G~~I~eY~Gevi~~~e~~~R~~~~~----~~~f~l~~~~~IDa~~~~~~~~~~~ 183 (261)
T 2f69_A 108 SERVYVAESLISSAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSRDWALN----GNTLSLDEETVIDVPEPYNHVSKYC 183 (261)
T ss_dssp HTTEEEEECSSTTCCEEEEESSCBCTTCEEEEECCEEECHHHHHTSCGGGC----SSCEECSSSCEEECCTTTTSTTTCC
T ss_pred CceEEEEecCCCCCceEEEECcccCCCCEEEEEeeEEeCHHHHHHHhhhhc----cceeeecCCeEEEcccccccccccc
Confidence 467999999986 9999999999999999999999999999999976663 578999999999995 59
Q ss_pred CCccccccCCCCCCcceeEEEEcCe-eEEEEEEccCCCCCCeEEEecCCCCC
Q 002934 784 GDKLKFANHSSNPNCFAKVMLVAGD-HRVGIFAKEHIEASEELFYDYRYGPD 834 (864)
Q Consensus 784 GN~aRFINHSC~PNc~~~~~~V~G~-~RI~~fA~RDI~aGEELTfDYgy~~d 834 (864)
||++|||||||+|||.+..|...+. ..|+|||+|||++||||||||++..+
T Consensus 184 Gn~aRfiNHSC~PN~~~~~~~~~~~~~~i~i~A~RdI~~GEELt~dYg~~~~ 235 (261)
T 2f69_A 184 ASLGHKANHSFTPNCIYDMFVHPRFGPIKCIRTLRAVEADEELTVAYGYDHS 235 (261)
T ss_dssp SCCGGGCEECSSCSEEEEEEEETTTEEEEEEEESSCBCTTCEEEECCCCCSC
T ss_pred ccceeeEeeCCCCCeEEEEEEcCCCCcEEEEEECcccCCCCEEEEEcCCccc
Confidence 9999999999999999988743333 34599999999999999999998776
No 12
>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A
Probab=99.93 E-value=5.7e-26 Score=242.02 Aligned_cols=117 Identities=28% Similarity=0.360 Sum_probs=104.0
Q ss_pred cCcEEEEecCCCC--ceeeeccccCCCCeeeEecccccCHHHHHHhhhhhcccCccccccCCCcEEEec--------ccc
Q 002934 714 QQRILLAKSDVAG--WGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDA--------YRK 783 (864)
Q Consensus 714 ~~~l~V~kS~~kG--~GLfA~edI~KGefI~EY~GEVIs~~Ea~rR~k~yd~~~~sYlf~L~~~~~IDA--------t~~ 783 (864)
.+.|.|++|+++| |||||+++|++|+||+||+||+|+..++++|...+. .|+|.++..++||| +..
T Consensus 162 ~~~~~v~~S~i~GkG~Gvfa~~~I~~G~~I~ey~Ge~i~~~~~~~r~~~~~----~~~~~l~~~~~iDa~~~~~~~~~~~ 237 (293)
T 1h3i_A 162 SERVYVAESLISSAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSRDWALN----GNTLSLDEETVIDVPEPYNHVSKYC 237 (293)
T ss_dssp HTTEEEEECSSSSSSEEEEESSCBCTTCEEEEECCEEECHHHHHHSCGGGC----TTEEECSSSCEEECCTTTTSTTTCC
T ss_pred ceeEEEeeeecCCCcceEEECCcCCCCCEEEEeccEEcCHHHHhHHhhhcc----cCEEecCCCEEEeCcccccccceee
Confidence 4689999999866 999999999999999999999999999999976553 57899999999999 779
Q ss_pred CCccccccCCCCCCcceeEEEEcCeeE-EEEEEccCCCCCCeEEEecCCCCC
Q 002934 784 GDKLKFANHSSNPNCFAKVMLVAGDHR-VGIFAKEHIEASEELFYDYRYGPD 834 (864)
Q Consensus 784 GN~aRFINHSC~PNc~~~~~~V~G~~R-I~~fA~RDI~aGEELTfDYgy~~d 834 (864)
||++|||||||+|||.+..+...+..+ |+|||+|||++||||||||++..+
T Consensus 238 gn~ar~iNHsc~pN~~~~~~~~~~~~~~~~~~a~r~I~~geElt~~Yg~~~~ 289 (293)
T 1h3i_A 238 ASLGHKANHSFTPNCIYDMFVHPRFGPIKCIRTLRAVEADEELTVAYGYDHS 289 (293)
T ss_dssp SCCGGGSEEESSCSEEEEEEEETTTEEEEEEEESSCBCTTCEEEEEEETTBC
T ss_pred ccceeeeccCCCCCeEEEEEEcCCCCcEEEEEECCccCCCCEEEEecCCCCC
Confidence 999999999999999998875444345 599999999999999999998754
No 13
>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A*
Probab=99.93 E-value=1.3e-26 Score=216.80 Aligned_cols=107 Identities=24% Similarity=0.341 Sum_probs=96.0
Q ss_pred cCcEEEEecCCCCceeeeccccCCCCeeeEecccccCHHHHHHhhhhhcccCccccccCCCcEEEeccccCCccccccCC
Q 002934 714 QQRILLAKSDVAGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHS 793 (864)
Q Consensus 714 ~~~l~V~kS~~kG~GLfA~edI~KGefI~EY~GEVIs~~Ea~rR~k~yd~~~~sYlf~L~~~~~IDAt~~GN~aRFINHS 793 (864)
.++++|++++++||||||+++|++|++|+||.|++++..+++. ....|+|.++. |++..||.+||||||
T Consensus 3 ~~~~~v~~s~~~G~GvfA~~~I~~G~~I~ey~g~vi~~~e~~~-------~~~~y~f~~~~----d~~~~~~~~~~~NHs 71 (119)
T 1n3j_A 3 NDRVIVKKSPLGGYGVFARKSFEKGELVEECLCIVRHNDDWGT-------ALEDYLFSRKN----MSAMALGFGAIFNHS 71 (119)
T ss_dssp CSSEEEECSCSSCCEEEECCCBCSCEEECCCCCEEECSHHHHH-------HSCSEEEEETT----EEEEESSSHHHHHSC
T ss_pred CCCEEEEECCCceeEEEECCcCCCCCEEEEeeEEEECHHHHhh-------ccCCeEEEeCC----ccccccCceeeeccC
Confidence 4789999999999999999999999999999999999988865 23568898877 899999999999999
Q ss_pred CCCCcceeEEEEcCeeEEEEEEccCCCCCCeEEEecCCCC
Q 002934 794 SNPNCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYRYGP 833 (864)
Q Consensus 794 C~PNc~~~~~~V~G~~RI~~fA~RDI~aGEELTfDYgy~~ 833 (864)
|+|||.+.. +.+..++.|+|+|||++||||||||+...
T Consensus 72 c~pN~~~~~--~~~~~~~~~~A~rdI~~GeElt~~Y~~~~ 109 (119)
T 1n3j_A 72 KDPNARHEL--TAGLKRMRIFTIKPIAIGEEITISYGDDY 109 (119)
T ss_dssp SSCCCEEEE--CSSSSCEEEEECSCBCSSEEECCCCCCCC
T ss_pred CCCCeeEEE--ECCCeEEEEEEccccCCCCEEEEecCchh
Confidence 999997654 46778999999999999999999998663
No 14
>2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A*
Probab=99.92 E-value=7.3e-26 Score=221.12 Aligned_cols=117 Identities=19% Similarity=0.276 Sum_probs=97.9
Q ss_pred CCCchhhhhcccCcEEEEecCC--CCceeeeccccCCCCeeeEecccccCHHHHHHhhhhhcccCccccccCC---C-cE
Q 002934 703 QCGNMRLLLRQQQRILLAKSDV--AGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLN---D-QY 776 (864)
Q Consensus 703 ~C~N~~lqrg~~~~l~V~kS~~--kG~GLfA~edI~KGefI~EY~GEVIs~~Ea~rR~k~yd~~~~sYlf~L~---~-~~ 776 (864)
.+.|+ .++.....|.|++|.+ +||||||+++|++|++|+||+||+|+..++. ...|+|.+. . .+
T Consensus 18 ~~~~~-~~~~lp~~l~l~~S~i~~~G~GVfA~~~I~kG~~~gey~Ge~i~~~e~~---------~~~Y~f~i~~~~~~~~ 87 (149)
T 2qpw_A 18 EVPEH-VLRGLPEEVRLFPSAVDKTRIGVWATKPILKGKKFGPFVGDKKKRSQVK---------NNVYMWEVYYPNLGWM 87 (149)
T ss_dssp GSCHH-HHHTCCTTEEEEECSSCTTSEEEEESSCBCTTCEECCCCCEEECGGGCC---------CSSSEEEEEETTTEEE
T ss_pred hhhHH-HHhCCCCCeEEEEcCCCCCceEEEECCccCCCCEEEEEeCEEcCHHHhc---------cCceEEEEecCCCeeE
Confidence 34454 3456788999999975 6999999999999999999999999877542 357999873 3 36
Q ss_pred EEeccc--cCCccccccCCCCC---CcceeEEEEcCeeEEEEEEccCCCCCCeEEEecCCCC
Q 002934 777 VLDAYR--KGDKLKFANHSSNP---NCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYRYGP 833 (864)
Q Consensus 777 ~IDAt~--~GN~aRFINHSC~P---Nc~~~~~~V~G~~RI~~fA~RDI~aGEELTfDYgy~~ 833 (864)
+|||+. .||++|||||||+| ||.+.. ...+|.|||+|||++||||||||+..+
T Consensus 88 ~IDa~~~~~gn~~RfINhSc~p~eqNl~~~~----~~~~I~~~A~RdI~~GEEL~~dY~~~~ 145 (149)
T 2qpw_A 88 CIDATDPEKGNWLRYVNWACSGEEQNLFPLE----INRAIYYKTLKPIAPGEELLVWYNGED 145 (149)
T ss_dssp EEECSSGGGSCGGGGCEECBTTBTCCEEEEE----ETTEEEEEESSCBCTTCBCEECCCCCC
T ss_pred EEeCCCCCCCcceeeeeccCChhhcCEEEEE----ECCEEEEEEccCCCCCCEEEEccCCcc
Confidence 899998 99999999999999 987632 346899999999999999999998654
No 15
>3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens}
Probab=99.87 E-value=1.5e-23 Score=222.50 Aligned_cols=122 Identities=19% Similarity=0.152 Sum_probs=90.5
Q ss_pred cCCCCceeeeccccCCCCeeeEecccccCHHHHHHhhhhhcccCccccccCCCcEEEeccccCCccccccCCCCCCccee
Q 002934 722 SDVAGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHSSNPNCFAK 801 (864)
Q Consensus 722 S~~kG~GLfA~edI~KGefI~EY~GEVIs~~Ea~rR~k~yd~~~~sYlf~L~~~~~IDAt~~GN~aRFINHSC~PNc~~~ 801 (864)
++.+||||||+++|++|+||+||+|+|+...+++.+.-. ......|.+.... ...+++.+||.+|||||||+|||.+
T Consensus 143 ~e~~G~GlfA~~~I~kGe~I~EY~Geii~~~e~ee~~~~-~~~~~dF~i~~s~-~~~~a~~~g~~arfiNHSC~PN~~~- 219 (273)
T 3s8p_A 143 SEQNGAKIVATKEWKRNDKIELLVGCIAELSEIEENMLL-RHGENDFSVMYST-RKNCAQLWLGPAAFINHDCRPNCKF- 219 (273)
T ss_dssp TCSSEEEEEESSCBCTTCEEEEEEEEEEEECHHHHHHHC-CTTTSCTTEEEET-TTTEEEEEESGGGGCEECSSCSEEE-
T ss_pred ecCCCceEEECCccCCCCEEEEEEEEEccccHHHHHHHh-hhcccccceeccc-cccccceecchHHhhCCCCCCCeEE-
Confidence 445999999999999999999999999877766554211 1111223222111 1134788999999999999999965
Q ss_pred EEEEcCeeEEEEEEccCCCCCCeEEEecCCCC---CCCCcccCCCCCCCC
Q 002934 802 VMLVAGDHRVGIFAKEHIEASEELFYDYRYGP---DQAPAWARKPEGSKR 848 (864)
Q Consensus 802 ~~~V~G~~RI~~fA~RDI~aGEELTfDYgy~~---d~~pcwC~~pe~~~~ 848 (864)
+ ..|..+|+|+|+|||++||||||||+... ....|.|+.++|+..
T Consensus 220 -~-~~~~~~i~i~A~RdI~~GEELt~~Y~~~~~~~~~f~C~C~~c~crG~ 267 (273)
T 3s8p_A 220 -V-STGRDTACVKALRDIEPGEEISCYYGDGFFGENNEFCECYTCERRGT 267 (273)
T ss_dssp -E-EEETTEEEEEESSCBCTTCBCEECCCTTTTSGGGTTCCCHHHHHHTC
T ss_pred -E-EcCCCEEEEEECceeCCCCEEEEecCchhcCCCCeEEECCCCcCCCC
Confidence 2 34556899999999999999999998554 346899988777643
No 16
>3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens}
Probab=99.81 E-value=5.2e-21 Score=200.68 Aligned_cols=115 Identities=19% Similarity=0.152 Sum_probs=84.3
Q ss_pred CCCCceeeeccccCCCCeeeEecccccCHHHHHHhhhhhcccCccccccCCCcEEEeccccCCccccccCCCCCCcceeE
Q 002934 723 DVAGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHSSNPNCFAKV 802 (864)
Q Consensus 723 ~~kG~GLfA~edI~KGefI~EY~GEVIs~~Ea~rR~k~yd~~~~sYlf~L~~~~~IDAt~~GN~aRFINHSC~PNc~~~~ 802 (864)
..+||||||.++|++|++|+||+|+|+...+++.+. +......|.+... ...+++..+||.+|||||||.|||.+..
T Consensus 116 ~~~G~Gv~A~~~I~kGE~I~ey~Geli~~t~~e~~~--~~~~~n~f~i~~~-~~~~~~~l~~~~ar~iNHSC~PN~~~~~ 192 (247)
T 3rq4_A 116 ETNGAKIVSTRAWKKNEKLELLVGCIAELREADEGL--LRAGENDFSIMYS-TRKRSAQLWLGPAAFINHDCKPNCKFVP 192 (247)
T ss_dssp CSSCEEEEESSCBCTTCEEEEEEEEEEECCGGGGGG--CCTTTSCTTEEEE-TTTTEEEEEESGGGGCEECSSCSEEEEE
T ss_pred cCCcceEEeCCccCCCCEEEEEEeEEEeCcHHHHHh--hhccCCcEEEEec-CCcccceeecchhhhcCCCCCCCEEEEE
Confidence 458999999999999999999999998665555532 2222222322211 1124678899999999999999996533
Q ss_pred EEEcCeeEEEEEEccCCCCCCeEEEecCCCC---CCCCcccCCC
Q 002934 803 MLVAGDHRVGIFAKEHIEASEELFYDYRYGP---DQAPAWARKP 843 (864)
Q Consensus 803 ~~V~G~~RI~~fA~RDI~aGEELTfDYgy~~---d~~pcwC~~p 843 (864)
+ +..+|.|+|+|||++||||||+|+... ....|.|+.+
T Consensus 193 --~-~~~~i~v~A~rdI~~GEElt~~Y~~~~~~~~~f~C~C~~C 233 (247)
T 3rq4_A 193 --A-DGNAACVKVLRDIEPGDEVTCFYGEGFFGEKNEHCECHTC 233 (247)
T ss_dssp --E-TTTEEEEEESSCBCTTCBCEECCCTTSSSGGGTTCCCHHH
T ss_pred --e-CCCEEEEEECCcCCCCCEEEEecCchhcCCCCCEEECCCC
Confidence 3 346899999999999999999998543 2356776643
No 17
>3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens}
Probab=99.78 E-value=2.7e-19 Score=178.36 Aligned_cols=112 Identities=21% Similarity=0.338 Sum_probs=83.0
Q ss_pred cccCcEEEEecCC--CCceeeeccccCCCCeeeEecccccCHHHHHHhhhhhcccCccccccCC---C--cEEEeccc--
Q 002934 712 RQQQRILLAKSDV--AGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLN---D--QYVLDAYR-- 782 (864)
Q Consensus 712 g~~~~l~V~kS~~--kG~GLfA~edI~KGefI~EY~GEVIs~~Ea~rR~k~yd~~~~sYlf~L~---~--~~~IDAt~-- 782 (864)
.....|.|.+|.+ +|+||||+++|++|++|++|.|++++.++++.. .+..|+|.+. . .++||++.
T Consensus 24 sLP~~l~l~~S~i~~~G~GVfA~~~IpkGt~fGpY~Ge~i~~~ea~~~------~~~~y~w~i~~~~G~~~~~IDa~~e~ 97 (170)
T 3ep0_A 24 VLPAEVIIAQSSIPGEGLGIFSKTWIKAGTEMGPFTGRVIAPEHVDIC------KNNNLMWEVFNEDGTVRYFIDASQED 97 (170)
T ss_dssp SCCTTEEEEECSSSSCSEEEEESSCBCTTCEEEEECCEEECC----------------CEEEEECTTSSEEEEEECC---
T ss_pred CCCCCeEEEEcCCCCCceEEEECcccCCCCEEEecCceecCHHHhccc------cCCceEEEEecCCCcEEEEEECCCCC
Confidence 3467899999977 489999999999999999999999999887642 3457888663 2 27999998
Q ss_pred cCCccccccCCCC---CCcceeEEEEcCeeEEEEEEccCCCCCCeEEEecCCCC
Q 002934 783 KGDKLKFANHSSN---PNCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYRYGP 833 (864)
Q Consensus 783 ~GN~aRFINHSC~---PNc~~~~~~V~G~~RI~~fA~RDI~aGEELTfDYgy~~ 833 (864)
.||++|||||+|. +|+.+.. + ..+|.|+|+|||.+||||+|+|+-.+
T Consensus 98 ~~NWmR~Vn~A~~~~eqNl~a~q--~--~~~I~~~a~RdI~pGeELlvwYg~~y 147 (170)
T 3ep0_A 98 HRSWMTYIKCARNEQEQNLEVVQ--I--GTSIFYKAIEMIPPDQELLVWYGNSH 147 (170)
T ss_dssp ---GGGGCEECSSTTTCCEEEEE--E--TTEEEEEESSCBCTTCBCEEEECC--
T ss_pred CcceeeeEEecCCcccCCeeeEE--E--CCEEEEEECcCcCCCCEEEEeeCHHH
Confidence 8999999999996 8986543 2 35899999999999999999998554
No 18
>3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens}
Probab=99.74 E-value=3.9e-18 Score=166.78 Aligned_cols=122 Identities=14% Similarity=0.208 Sum_probs=86.8
Q ss_pred CCCchhhhhcccCcEEEEecC-CCCceeeeccccCCCCeeeEecccccCHHHHHHhhhhhcccCccccccCC--C--cEE
Q 002934 703 QCGNMRLLLRQQQRILLAKSD-VAGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLN--D--QYV 777 (864)
Q Consensus 703 ~C~N~~lqrg~~~~l~V~kS~-~kG~GLfA~edI~KGefI~EY~GEVIs~~Ea~rR~k~yd~~~~sYlf~L~--~--~~~ 777 (864)
...++.. .-....|.|..|. .+|+||||+++|++|+++++|.|++++..++..|. ..+..|+|.+. . .++
T Consensus 12 ~v~~ra~-~slP~~l~l~~S~~~~g~GVfa~~~Ip~G~~fGPy~Ge~~~~~e~~~~~----~~~~~y~w~i~~~~~~~~~ 86 (151)
T 3db5_A 12 PIESRAR-LSLPKQLVLRQSIVGAEVGVWTGETIPVRTCFGPLIGQQSHSMEVAEWT----DKAVNHIWKIYHNGVLEFC 86 (151)
T ss_dssp CCCCHHH-HTCCTTEEEEECC---CEEEEESSCBCTTCEECCCCCEEEC---------------CCSEEEEEETTEEEEE
T ss_pred cCCChHH-hcCCCCeEEEEccCCCceEEEEecccCCCCEEEEeccEEeCHHHhhccc----ccCCCceEEEEeCCCEEEE
Confidence 3444433 3456778898863 48999999999999999999999999999887752 12345777542 2 368
Q ss_pred Eeccc--cCCccccccCCCC---CCcceeEEEEcCeeEEEEEEccCCCCCCeEEEecCCCC
Q 002934 778 LDAYR--KGDKLKFANHSSN---PNCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYRYGP 833 (864)
Q Consensus 778 IDAt~--~GN~aRFINHSC~---PNc~~~~~~V~G~~RI~~fA~RDI~aGEELTfDYgy~~ 833 (864)
||++. .||++|||||+|. +|+.+.. . ..+|.|+|+|||.+||||+|+|+-.+
T Consensus 87 iD~~~~~~~NWmR~Vn~A~~~~eqNl~a~q--~--~~~I~~~a~rdI~pGeELlv~Yg~~y 143 (151)
T 3db5_A 87 IITTDENECNWMMFVRKARNREEQNLVAYP--H--DGKIFFCTSQDIPPENELLFYYSRDY 143 (151)
T ss_dssp EECCCTTTSCGGGGCEECSSTTTCCEEEEE--E--TTEEEEEESSCBCTTCBCEEEECC--
T ss_pred EECcCCCCCcceeEEEecCCcccCceEEEE--E--CCEEEEEEccccCCCCEEEEecCHHH
Confidence 99997 5999999999996 5987643 2 36799999999999999999998544
No 19
>3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens}
Probab=99.73 E-value=1.8e-18 Score=175.84 Aligned_cols=110 Identities=18% Similarity=0.307 Sum_probs=90.9
Q ss_pred cccCcEEEEecCC--CCceeeeccccCCCCeeeEecccccCHHHHHHhhhhhcccCccccccCC--C--cEEEeccc--c
Q 002934 712 RQQQRILLAKSDV--AGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLN--D--QYVLDAYR--K 783 (864)
Q Consensus 712 g~~~~l~V~kS~~--kG~GLfA~edI~KGefI~EY~GEVIs~~Ea~rR~k~yd~~~~sYlf~L~--~--~~~IDAt~--~ 783 (864)
-....|.|..|.+ +|+||||+++|++|+++++|.|++++.+++.+ ..+..|+|.+. . .++|||+. .
T Consensus 55 SLP~~L~lr~S~i~~~G~GVfa~~~IpkGt~fGPY~Ge~~~~~e~~~------~~~~~y~w~i~~~g~~~~~IDas~e~~ 128 (196)
T 3dal_A 55 SLPRNLLFKYATNSEEVIGVMSKEYIPKGTRFGPLIGEIYTNDTVPK------NANRKYFWRIYSRGELHHFIDGFNEEK 128 (196)
T ss_dssp TCCTTEEEEECTTSCCEEEEEESSCBCTTEEECCCCCEEECTTTCC---------CCTTEEEEEETTEEEEEEECCCTTS
T ss_pred cCCCCeEEEECCCCCceeEEEEccccCCCCEEEeccceEcCHHHhhh------ccCCcceeeeccCCCEEEEEECCCCCC
Confidence 4467899999977 89999999999999999999999999877543 23457888763 2 37999987 8
Q ss_pred CCccccccCCCC---CCcceeEEEEcCeeEEEEEEccCCCCCCeEEEecCC
Q 002934 784 GDKLKFANHSSN---PNCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYRY 831 (864)
Q Consensus 784 GN~aRFINHSC~---PNc~~~~~~V~G~~RI~~fA~RDI~aGEELTfDYgy 831 (864)
||++|||||+|. +|+.+.. . ..+|.|+|+|||.+||||+|+|+-
T Consensus 129 gNWmRfVn~A~~~~eqNl~a~q--~--~~~I~y~a~RdI~pGeELlvwYg~ 175 (196)
T 3dal_A 129 SNWMRYVNPAHSPREQNLAACQ--N--GMNIYFYTIKPIPANQELLVWYCR 175 (196)
T ss_dssp SCGGGGCEECSSTTTCCEEEEE--E--TTEEEEEESSCBCTTCBCEEEECH
T ss_pred CceEEeEEecCCcccCCcEEEE--E--CCEEEEEECcccCCCCEEEEecCH
Confidence 999999999996 7986633 2 368999999999999999999983
No 20
>3ray_A PR domain-containing protein 11; structural genomics consortium, SGC, histone methylation, Zn transcriptional regulation, chromatin, transcription; 1.73A {Homo sapiens}
Probab=99.56 E-value=3.9e-15 Score=155.01 Aligned_cols=105 Identities=17% Similarity=0.174 Sum_probs=84.3
Q ss_pred cccCcEEEEecCCCCceeeec-cccCCCCeeeEecccccCHHHHHHhhhhhcccCccccccCC----CcEEEeccc--cC
Q 002934 712 RQQQRILLAKSDVAGWGAFLK-NSVSKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLN----DQYVLDAYR--KG 784 (864)
Q Consensus 712 g~~~~l~V~kS~~kG~GLfA~-edI~KGefI~EY~GEVIs~~Ea~rR~k~yd~~~~sYlf~L~----~~~~IDAt~--~G 784 (864)
-....|.|.+|...|+|||+. +.|++|+.+++|.|++++..+++ ..|+|.+. ..++||+.. .|
T Consensus 69 SLP~~L~vr~S~i~~~Gv~~~~~~IpkGt~fGPY~Ge~~s~~ea~----------~~y~wei~~~~g~~~~IDgsde~~g 138 (237)
T 3ray_A 69 TIPQGMEVVKDTSGESDVRCVNEVIPKGHIFGPYEGQISTQDKSA----------GFFSWLIVDKNNRYKSIDGSDETKA 138 (237)
T ss_dssp TCCTTEEEEECTTSCEEEEECSSCBCTTEEECCCCSEEECC---------------CCEEEEECTTSCEEEEECCCTTTS
T ss_pred cCCCCeEEEEcCCCCcceEEEeCcCCCCCEEEecccEEcChHHcc----------ccceEEEEcCCCcEEEEecCCCCCC
Confidence 345679999999999999987 89999999999999999887653 23555432 236899997 79
Q ss_pred CccccccCCCC---CCcceeEEEEcCeeEEEEEEccCCCCCCeEEEecC
Q 002934 785 DKLKFANHSSN---PNCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYR 830 (864)
Q Consensus 785 N~aRFINHSC~---PNc~~~~~~V~G~~RI~~fA~RDI~aGEELTfDYg 830 (864)
|++|||||+|. +|+.+.. . ..+|.|+|+|+|.+||||+|+|+
T Consensus 139 NWmRfVn~Ar~~~EqNL~A~q--~--~~~Iyy~a~RdI~pGeELlVwYg 183 (237)
T 3ray_A 139 NWMRYVVISREEREQNLLAFQ--H--SERIYFRACRDIRPGEWLRVWYS 183 (237)
T ss_dssp CGGGGCEECCCTTTCCEEEEE--E--TTEEEEEESSCBCTTCBCEEEEC
T ss_pred cceeEEEcCCCcccccceeEE--e--CCEEEEEEccccCCCCEEEEeeC
Confidence 99999999996 6876533 2 36799999999999999999997
No 21
>3ihx_A PR domain zinc finger protein 10; PRDM10, methyltransferase, structural genomics, structural G consortium, SGC, DNA-binding, metal-binding, nucleus; 2.50A {Homo sapiens}
Probab=99.51 E-value=8.5e-15 Score=143.57 Aligned_cols=102 Identities=18% Similarity=0.201 Sum_probs=79.5
Q ss_pred cCcEEEEecCCCCceeeeccccCCCCeeeEecccccCHHHHHHhhhhhcccCccccccC------------CCcEEEecc
Q 002934 714 QQRILLAKSDVAGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDL------------NDQYVLDAY 781 (864)
Q Consensus 714 ~~~l~V~kS~~kG~GLfA~edI~KGefI~EY~GEVIs~~Ea~rR~k~yd~~~~sYlf~L------------~~~~~IDAt 781 (864)
...|+|.+ .|+||||+++|++|+.+++|.|++++.+++.. ..|+|.+ +..++||++
T Consensus 22 P~~L~i~~---~g~GVfA~~~IpkGt~fGPy~Ge~~~~~e~~~---------~~~~~~v~~~d~~~~~~~~~~~~~iD~~ 89 (152)
T 3ihx_A 22 PLVLYIDR---FLGGVFSKRRIPKRTQFGPVEGPLVRGSELKD---------CYIHLKVSLDKGDRKERDLHEDLWFELS 89 (152)
T ss_dssp CTTEEECT---TTCSEEESSCBCSSCEECCCCSCEECSTTCCS---------SSCCCBC---------------CEECCC
T ss_pred CcceEEee---cCCeEEECceecCCCEEEeeccEEcCHHHhcc---------CcceEEEEccccccccccCCccEEEEcc
Confidence 34566654 58999999999999999999999999876532 2233322 125799998
Q ss_pred c--cCCccccccCCCC---CCcceeEEEEcCeeEEEEEEccCCCCCCeEEEecCC
Q 002934 782 R--KGDKLKFANHSSN---PNCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYRY 831 (864)
Q Consensus 782 ~--~GN~aRFINHSC~---PNc~~~~~~V~G~~RI~~fA~RDI~aGEELTfDYgy 831 (864)
. .||++|||||+|. +|+.+.. ...+|.|.|+|+|.+||||+++|+-
T Consensus 90 ~~~~~NWmr~vn~a~~~~eqNl~a~q----~~~~I~~~~~r~I~pGeELlv~Y~~ 140 (152)
T 3ihx_A 90 DETLCNWMMFVRPAQNHLEQNLVAYQ----YGHHVYYTTIKNVEPKQELKVWYAA 140 (152)
T ss_dssp CTTTSCGGGGCCBCCSTTTCCEEEEE----CSSSEEEEESSCBCTTCBCCEEECH
T ss_pred CCCCCcceeeeeccCCccCCCcEEEE----eCCeEEEEEeeecCCCCEEEEechH
Confidence 7 5999999999997 7886532 2457889999999999999999983
No 22
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.22 E-value=5.6e-07 Score=100.66 Aligned_cols=44 Identities=32% Similarity=0.380 Sum_probs=36.2
Q ss_pred CccccccCCCCCCcceeEEEEcCeeEEEEEEccCCCCCCeEEEecCCC
Q 002934 785 DKLKFANHSSNPNCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYRYG 832 (864)
Q Consensus 785 N~aRFINHSC~PNc~~~~~~V~G~~RI~~fA~RDI~aGEELTfDYgy~ 832 (864)
..+.||||||.|||.+.. . | .++.|+|+|||++|||||++|...
T Consensus 200 ~~~s~~NHsC~PN~~~~~--~-~-~~~~~~a~r~I~~GeEl~isY~~~ 243 (429)
T 3qwp_A 200 PSISLLNHSCDPNCSIVF--N-G-PHLLLRAVRDIEVGEELTICYLDM 243 (429)
T ss_dssp TTGGGCEECSSCSEEEEE--E-T-TEEEEEECSCBCTTCEEEECCSCS
T ss_pred hhhHhhCcCCCCCeEEEE--e-C-CEEEEEEeeeECCCCEEEEEecCC
Confidence 457899999999996532 2 3 468899999999999999999743
No 23
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.19 E-value=7e-07 Score=101.78 Aligned_cols=44 Identities=32% Similarity=0.446 Sum_probs=35.5
Q ss_pred ccccccCCCCCCcceeEEEEcCe-----------eEEEEEEccCCCCCCeEEEecCC
Q 002934 786 KLKFANHSSNPNCFAKVMLVAGD-----------HRVGIFAKEHIEASEELFYDYRY 831 (864)
Q Consensus 786 ~aRFINHSC~PNc~~~~~~V~G~-----------~RI~~fA~RDI~aGEELTfDYgy 831 (864)
.+.||||||.|||.+.. .++. .+|.|+|+|||++||||||+|..
T Consensus 200 ~~s~~NHSC~PN~~~~~--~~~~~~~~~~~~~~~~~~~v~A~rdI~~GEEltisY~~ 254 (490)
T 3n71_A 200 NLGLVNHDCWPNCTVIF--NNGNHEAVKSMFHTQMRIELRALGKISEGEELTVSYID 254 (490)
T ss_dssp TGGGCEECSSCSEEEEE--ECCCCSSSCCCGGGSCEEEEEESSCBCTTCBCEECSSC
T ss_pred hhhhcccCCCCCeeEEe--cCCccccccccccccceEEEEECCCCCCCCEEEEeecC
Confidence 35688999999996433 3332 28999999999999999999973
No 24
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.04 E-value=2e-06 Score=96.54 Aligned_cols=43 Identities=26% Similarity=0.379 Sum_probs=34.9
Q ss_pred ccccccCCCCCCcceeEEEEcCeeEEEEEEccCCCCCCeEEEecCCC
Q 002934 786 KLKFANHSSNPNCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYRYG 832 (864)
Q Consensus 786 ~aRFINHSC~PNc~~~~~~V~G~~RI~~fA~RDI~aGEELTfDYgy~ 832 (864)
.+.|+||||.|||.+. + +| .++.|+|+|||++|||||++|+..
T Consensus 201 ~~s~~NHsC~PN~~~~--~-~~-~~~~~~a~r~I~~Geel~i~Y~~~ 243 (433)
T 3qww_A 201 DVALMNHSCCPNVIVT--Y-KG-TLAEVRAVQEIHPGDEVFTSYIDL 243 (433)
T ss_dssp TGGGSEECSSCSEEEE--E-ET-TEEEEEESSCBCTTCEEEECCSCT
T ss_pred cccccCCCCCCCceEE--E-cC-CEEEEEeccCcCCCCEEEEeecCC
Confidence 4568999999998653 2 23 368899999999999999999743
No 25
>2llk_A Cyclin-D-binding MYB-like transcription factor 1; helix bundle, SGC, structural genomics consortium, NESG, NOR structural genomics consortium; NMR {Homo sapiens}
Probab=96.37 E-value=0.0022 Score=55.79 Aligned_cols=51 Identities=20% Similarity=0.265 Sum_probs=44.8
Q ss_pred CCccccccCCcccchhhhhHhhhcCChHHHHHHHHHHhcCCcHHHHHHHHHhHh
Q 002934 169 EPEEEKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFIGIATSEVQDRYSTLKE 222 (864)
Q Consensus 169 e~eeek~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~~~~~sei~eRy~~L~~ 222 (864)
+|.--|..|++.||.+|....+++|-. -..||++|++++-+|++||+.|+.
T Consensus 18 dP~i~k~~wT~EED~~L~~l~~~~G~k---W~~IA~~lgRt~~q~knRw~~L~~ 68 (73)
T 2llk_A 18 GDRNHVGKYTPEEIEKLKELRIKHGND---WATIGAALGRSASSVKDRCRLMKD 68 (73)
T ss_dssp -CCCCCCSSCHHHHHHHHHHHHHHSSC---HHHHHHHHTSCHHHHHHHHHHCSC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCCC---HHHHHHHhCCCHHHHHHHHHHHHH
Confidence 344557789999999999999999976 888999889999999999999876
No 26
>3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A*
Probab=96.16 E-value=0.0027 Score=71.69 Aligned_cols=41 Identities=22% Similarity=0.317 Sum_probs=33.4
Q ss_pred cccccCCCCCCcceeEEEEcCeeEEEEEEccCCCCCCeEEEecCC
Q 002934 787 LKFANHSSNPNCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYRY 831 (864)
Q Consensus 787 aRFINHSC~PNc~~~~~~V~G~~RI~~fA~RDI~aGEELTfDYgy 831 (864)
+-++||+|.||+.+. .++ ..+.++|.|+|++|||||++||.
T Consensus 223 ~D~~NH~~~~~~~~~---~~~-~~~~~~a~~~i~~Geei~~~YG~ 263 (449)
T 3qxy_A 223 ADILNHLANHNANLE---YSA-NCLRMVATQPIPKGHEIFNTYGQ 263 (449)
T ss_dssp GGGCEECSSCSEEEE---ECS-SEEEEEESSCBCTTCEEEECCSS
T ss_pred HHHhcCCCCCCeEEE---EeC-CeEEEEECCCcCCCchhhccCCC
Confidence 457999999998542 233 36889999999999999999984
No 27
>2h21_A Ribulose-1,5 bisphosphate carboxylase/oxygenase; SET domain, protein lysine methyltransferase, transferase; HET: SAM; 2.45A {Pisum sativum} SCOP: a.166.1.1 b.85.7.3 PDB: 2h23_A* 2h2e_A* 2h2j_A* 1p0y_A* 1ozv_A* 1mlv_A*
Probab=96.07 E-value=0.0027 Score=70.98 Aligned_cols=45 Identities=20% Similarity=0.299 Sum_probs=34.1
Q ss_pred cccccCCCCCCcceeEEEEcC-------eeEEEEEEccCCCCCCeEEEecCC
Q 002934 787 LKFANHSSNPNCFAKVMLVAG-------DHRVGIFAKEHIEASEELFYDYRY 831 (864)
Q Consensus 787 aRFINHSC~PNc~~~~~~V~G-------~~RI~~fA~RDI~aGEELTfDYgy 831 (864)
+=++||++.||.....|.+.+ ...+.+.|.|+|++||||+++||.
T Consensus 190 ~D~~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~i~~Geei~~sYG~ 241 (440)
T 2h21_A 190 ADLINHSAGVTTEDHAYEVKGAAGLFSWDYLFSLKSPLSVKAGEQVYIQYDL 241 (440)
T ss_dssp TTSCEECTTCCCCCCEEEC----------CEEEEEESSCBCTTSBCEECSCT
T ss_pred hHhhcCCCCcccccceeeecCcccccCCCceEEEEECCCCCCCCEEEEeCCC
Confidence 347899999986444454433 457889999999999999999984
No 28
>2cqr_A RSGI RUH-043, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=95.64 E-value=0.013 Score=50.92 Aligned_cols=53 Identities=9% Similarity=0.290 Sum_probs=46.0
Q ss_pred CccccccCCcccchhhhhHhhhcCCh-HHHHHHHHHHh-cCCcHHHHHHHHHhHh
Q 002934 170 PEEEKHEFSDGEDRILWTVFEEHGLG-EEVINAVSQFI-GIATSEVQDRYSTLKE 222 (864)
Q Consensus 170 ~eeek~~f~~~ed~~~~~~~~e~g~s-d~v~~~l~~~~-~~~~sei~eRy~~L~~ 222 (864)
++-.+..|+..||.+|..+++.||.. ..=...||++| ++|..++++||+.|.+
T Consensus 14 ~~~~~~~WT~eEd~~L~~al~~~g~~~~~rW~~IA~~vpGRT~~qcr~Ry~~L~~ 68 (73)
T 2cqr_A 14 ARSAEEPWTQNQQKLLELALQQYPRGSSDCWDKIARCVPSKSKEDCIARYKLLVS 68 (73)
T ss_dssp TTCSSCCCCHHHHHHHHHHHHHSCSSSHHHHHHHGGGCSSSCHHHHHHHHHHHHS
T ss_pred cccCCCCCCHHHHHHHHHHHHHcCCCCCchHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 44456779999999999999999964 34479999999 8999999999999987
No 29
>2lr8_A CAsp8-associated protein 2; structural genomics, northeast structural genomics consortiu PSI-biology, apoptosis; NMR {Homo sapiens}
Probab=94.05 E-value=0.0039 Score=53.46 Aligned_cols=47 Identities=13% Similarity=0.331 Sum_probs=44.0
Q ss_pred cCCcccchhhhhHhhhcCChHHHHHHHHHHhcCCcHHHHHHHHHhHh
Q 002934 176 EFSDGEDRILWTVFEEHGLGEEVINAVSQFIGIATSEVQDRYSTLKE 222 (864)
Q Consensus 176 ~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~~~~~sei~eRy~~L~~ 222 (864)
-.+..+|++|=.+.|+-|-+++.|..||+.|+.++.||.+||..|..
T Consensus 16 lWTReeDR~IL~~cq~~G~s~~tfa~iA~~Lnks~~QV~~RF~~Lm~ 62 (70)
T 2lr8_A 16 LWTRNDDRVILLECQKRGPSSKTFAYLAAKLDKNPNQVSERFQQLMK 62 (70)
Confidence 46778999999999999999999999999999999999999999875
No 30
>3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens}
Probab=94.71 E-value=0.017 Score=66.17 Aligned_cols=41 Identities=20% Similarity=0.250 Sum_probs=31.6
Q ss_pred cccccCCCCCCcceeEEEEcCeeEEEEEEccCCCCCCeEEEecC
Q 002934 787 LKFANHSSNPNCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYR 830 (864)
Q Consensus 787 aRFINHSC~PNc~~~~~~V~G~~RI~~fA~RDI~aGEELTfDYg 830 (864)
+=++||+|.||.. .|.. ....+.++|.|+|++|||||++||
T Consensus 273 ~Dm~NH~~~~~~~--~~~~-~~~~~~~~a~~~i~~Geei~isYG 313 (497)
T 3smt_A 273 WDMCNHTNGLITT--GYNL-EDDRCECVALQDFRAGEQIYIFYG 313 (497)
T ss_dssp GGGCEECSCSEEE--EEET-TTTEEEEEESSCBCTTCEEEECCC
T ss_pred HHhhcCCCcccce--eeec-cCCeEEEEeCCccCCCCEEEEeCC
Confidence 4578999999631 2322 334678899999999999999997
No 31
>2cu7_A KIAA1915 protein; nuclear protein, SANT domain, DNA binding, regulation of transcription, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=94.57 E-value=0.041 Score=47.01 Aligned_cols=53 Identities=9% Similarity=0.055 Sum_probs=45.0
Q ss_pred CccccccCCcccchhhhhHhhhcCChHHHHHHHHHHh-cCCcHHHHHHHHHhHhhcC
Q 002934 170 PEEEKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLKEKYD 225 (864)
Q Consensus 170 ~eeek~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~-~~~~sei~eRy~~L~~k~~ 225 (864)
|.-.+..|++.||.+|-..+++||- -...||++| +++..+|+.||..+..+..
T Consensus 5 p~~~~~~WT~eEd~~l~~~~~~~G~---~W~~Ia~~~~~Rt~~q~k~r~~~~l~~~~ 58 (72)
T 2cu7_A 5 SSGYSVKWTIEEKELFEQGLAKFGR---RWTKISKLIGSRTVLQVKSYARQYFKNKV 58 (72)
T ss_dssp CSSCCCCCCHHHHHHHHHHHHHTCS---CHHHHHHHHSSSCHHHHHHHHHHHHHHHS
T ss_pred CCcCCCCCCHHHHHHHHHHHHHHCc---CHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 3445778999999999999999998 477888888 8999999999998876543
No 32
>2yqk_A Arginine-glutamic acid dipeptide repeats protein; structure genomics, SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.16 E-value=0.062 Score=45.10 Aligned_cols=44 Identities=27% Similarity=0.428 Sum_probs=38.7
Q ss_pred CCCCcHHHHHHHHHhHhhcCCchHHHHHhhhCCCCcHHHHHHHHh
Q 002934 497 SSEWKPIEKELYLKGVEIFGRNSCLIARNLLSGLKTCMEVSTYMR 541 (864)
Q Consensus 497 ~~~W~~~E~~l~~k~v~ifG~N~C~iA~~ll~g~KTC~EV~~ym~ 541 (864)
...||.-|..+|+.++..||+|+-.|++.++ +.||-.+|-+|..
T Consensus 9 ~~~WT~eE~~~Fe~~l~~yGKdf~~I~~~~v-~~Kt~~~~v~fYY 52 (63)
T 2yqk_A 9 EKCWTEDEVKRFVKGLRQYGKNFFRIRKELL-PNKETGELITFYY 52 (63)
T ss_dssp CCSCCHHHHHHHHHHHHHTCSCHHHHHHHSC-TTSCHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHhCccHHHHHHHHc-CCCcHHHHHHHHh
Confidence 4689999999999999999999999998533 7899999988664
No 33
>2yum_A ZZZ3 protein, zinc finger ZZ-type-containing protein 3; transcription, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.97 E-value=0.049 Score=46.73 Aligned_cols=53 Identities=8% Similarity=0.051 Sum_probs=44.2
Q ss_pred CccccccCCcccchhhhhHhhhcCChH---HHHHHHHHHh-cCCcHHHHHHH-HHhHh
Q 002934 170 PEEEKHEFSDGEDRILWTVFEEHGLGE---EVINAVSQFI-GIATSEVQDRY-STLKE 222 (864)
Q Consensus 170 ~eeek~~f~~~ed~~~~~~~~e~g~sd---~v~~~l~~~~-~~~~sei~eRy-~~L~~ 222 (864)
|.--|..|+..||.+|...++.||... .=...||++| ++|+.++++|| +.|..
T Consensus 4 p~~~~~~WT~eEd~~L~~~v~~~g~~~~~~~~W~~IA~~~~~Rt~~qcr~r~~~~l~~ 61 (75)
T 2yum_A 4 GSSGNQLWTVEEQKKLEQLLIKYPPEEVESRRWQKIADELGNRTAKQVASQVQKYFIK 61 (75)
T ss_dssp CCCCSSCCCHHHHHHHHHHHHHSCCCSCHHHHHHHHHHHHSSSCHHHHHHHHHHHHGG
T ss_pred CCCCCCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 445577899999999999999999643 5578999999 79999999999 55554
No 34
>2crg_A Metastasis associated protein MTA3; transcription factor, helix turn helix, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.4.1.3
Probab=93.96 E-value=0.068 Score=45.83 Aligned_cols=44 Identities=23% Similarity=0.420 Sum_probs=39.1
Q ss_pred CCCCcHHHHHHHHHhHhhcCCchHHHHHhhhCCCCcHHHHHHHHh
Q 002934 497 SSEWKPIEKELYLKGVEIFGRNSCLIARNLLSGLKTCMEVSTYMR 541 (864)
Q Consensus 497 ~~~W~~~E~~l~~k~v~ifG~N~C~iA~~ll~g~KTC~EV~~ym~ 541 (864)
...||+-|..+|+.++..||+|+-.|++.+| +.||-.+|-+|..
T Consensus 8 ~~~WT~eE~~~Fe~~l~~yGKdf~~I~~~~v-~~Kt~~~~v~fYY 51 (70)
T 2crg_A 8 MEEWSASEACLFEEALEKYGKDFNDIRQDFL-PWKSLTSIIEYYY 51 (70)
T ss_dssp SCCCCHHHHHHHHHHHHHTCSCHHHHHHTTC-SSSCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCccHHHHHHHHc-CCCCHHHHHHHHH
Confidence 5689999999999999999999999999533 7899999988765
No 35
>2eqr_A N-COR1, N-COR, nuclear receptor corepressor 1; SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.91 E-value=0.077 Score=44.12 Aligned_cols=43 Identities=26% Similarity=0.299 Sum_probs=38.0
Q ss_pred CCCCcHHHHHHHHHhHhhcCCchHHHHHhhhCCCCcHHHHHHHHh
Q 002934 497 SSEWKPIEKELYLKGVEIFGRNSCLIARNLLSGLKTCMEVSTYMR 541 (864)
Q Consensus 497 ~~~W~~~E~~l~~k~v~ifG~N~C~iA~~ll~g~KTC~EV~~ym~ 541 (864)
...||+-|..||+.++..||+++-.||..| +.||-.+|-.|..
T Consensus 12 ~~~WT~eE~~~F~~~~~~~gk~w~~Ia~~l--~~rt~~~~v~~Yy 54 (61)
T 2eqr_A 12 MNVWTDHEKEIFKDKFIQHPKNFGLIASYL--ERKSVPDCVLYYY 54 (61)
T ss_dssp CCSCCHHHHHHHHHHHHHSTTCHHHHHHHC--TTSCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCCHHHHHHHc--CCCCHHHHHHHHH
Confidence 468999999999999999999999999765 6799999977654
No 36
>2din_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.74 E-value=0.056 Score=45.33 Aligned_cols=52 Identities=19% Similarity=0.276 Sum_probs=44.9
Q ss_pred CCccccccCCcccchhhhhHhhhcCChHHHHHHHHHHhcCCcHHHHHHHHHhHhh
Q 002934 169 EPEEEKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFIGIATSEVQDRYSTLKEK 223 (864)
Q Consensus 169 e~eeek~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~~~~~sei~eRy~~L~~k 223 (864)
.|.--|..|+..||.+|-...+++|- --..||+++++++.++++||..+..+
T Consensus 4 ~P~~~k~~WT~eED~~L~~~~~~~g~---~W~~Ia~~~gRt~~qcr~Rw~~~l~~ 55 (66)
T 2din_A 4 GSSGKKTEWSREEEEKLLHLAKLMPT---QWRTIAPIIGRTAAQCLEHYEFLLDK 55 (66)
T ss_dssp SSSSSCCCCCHHHHHHHHHHHHHCTT---CHHHHHHHHSSCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHcCC---CHHHHhcccCcCHHHHHHHHHHHhCh
Confidence 35556788999999999999999997 36788888899999999999988654
No 37
>1x41_A Transcriptional adaptor 2-like, isoform B; transcriptional adaptor protein2, transcriptional activation, MYB domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=93.65 E-value=0.047 Score=45.08 Aligned_cols=48 Identities=15% Similarity=0.255 Sum_probs=41.0
Q ss_pred ccccCCcccchhhhhHhhhcCChHHHHHHHHHHh-cCCcHHHHHHHHHhHh
Q 002934 173 EKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLKE 222 (864)
Q Consensus 173 ek~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~-~~~~sei~eRy~~L~~ 222 (864)
-+..|+..||.+|-.+++.||... -..||++| ++++.++++||...-.
T Consensus 7 ~~~~WT~eED~~L~~~v~~~G~~~--W~~Ia~~~~~Rt~~qcr~r~~~~l~ 55 (60)
T 1x41_A 7 GDPSWTAQEEMALLEAVMDCGFGN--WQDVANQMCTKTKEECEKHYMKYFS 55 (60)
T ss_dssp CCSSSCHHHHHHHHHHHHHTCTTC--HHHHHHHHTTSCHHHHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHHHHHHHHCcCc--HHHHHHHhCCCCHHHHHHHHHHHcc
Confidence 467899999999999999999743 67788888 7999999999987644
No 38
>3sjm_A Telomeric repeat-binding factor 2; human telomeric repeat binding protein 2, telomere, telomeri homeodomain proteins amino acid sequence; HET: DNA; 1.35A {Homo sapiens} PDB: 1xg1_A 1vfc_A 1vf9_A 1w0u_A
Probab=93.38 E-value=0.054 Score=45.64 Aligned_cols=49 Identities=20% Similarity=0.293 Sum_probs=41.1
Q ss_pred ccccCCcccchhhhhHhhhcCChHHHHHHHHHHh---cCCcHHHHHHHHHhHhh
Q 002934 173 EKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI---GIATSEVQDRYSTLKEK 223 (864)
Q Consensus 173 ek~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~---~~~~sei~eRy~~L~~k 223 (864)
.|+-|+..||.+|...+++||-.. -..|++++ ++++.++++||..|...
T Consensus 10 kk~~WT~eED~~L~~~V~~~G~~~--W~~Ia~~~~~~~Rt~~qcr~Rw~nl~k~ 61 (64)
T 3sjm_A 10 KKQKWTVEESEWVKAGVQKYGEGN--WAAISKNYPFVNRTAVMIKDRWRTMKRL 61 (64)
T ss_dssp CCCCCCHHHHHHHHHHHHHHCTTC--HHHHHHHSCCSSCCHHHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHccCCCc--hHHHHhhcCCCCCCHHHHHHHHHHHhcc
Confidence 477899999999999999999643 55667653 79999999999998763
No 39
>2d9a_A B-MYB, MYB-related protein B; DNA binding, structural genomics, unknown function, NPPSFA; NMR {Mus musculus}
Probab=93.25 E-value=0.055 Score=44.47 Aligned_cols=50 Identities=14% Similarity=0.232 Sum_probs=42.2
Q ss_pred ccccccCCcccchhhhhHhhhcCChHHHHHHHHHHh-cCCcHHHHHHHHHhHh
Q 002934 171 EEEKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLKE 222 (864)
Q Consensus 171 eeek~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~-~~~~sei~eRy~~L~~ 222 (864)
.--|..|+..||.+|...+++||... -..||++| ++++.++++||..+-.
T Consensus 5 ~~~k~~Wt~eED~~L~~~v~~~G~~~--W~~Ia~~~~~Rt~~qcr~Rw~~~l~ 55 (60)
T 2d9a_A 5 SSGKVKWTHEEDEQLRALVRQFGQQD--WKFLASHFPNRTDQQCQYRWLRVLS 55 (60)
T ss_dssp CCCCSCCCHHHHHHHHHHHHHTCTTC--HHHHHHHCSSSCHHHHHHHHHHTSC
T ss_pred CCCCCCCCHHHHHHHHHHHHHhCCCC--HHHHHHHccCCCHHHHHHHHHHHcC
Confidence 34577899999999999999999522 67888888 7999999999987754
No 40
>1guu_A C-MYB, MYB proto-oncogene protein; transcription, transcription regulation, DNA binding, ION bindi proto-oncogene, nuclear protein, activator; 1.6A {Mus musculus} SCOP: a.4.1.3 PDB: 1mbe_A 1mbf_A
Probab=93.19 E-value=0.066 Score=42.64 Aligned_cols=46 Identities=17% Similarity=0.353 Sum_probs=39.9
Q ss_pred cccCCcccchhhhhHhhhcCChHHHHHHHHHHh-cCCcHHHHHHHHHhH
Q 002934 174 KHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLK 221 (864)
Q Consensus 174 k~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~-~~~~sei~eRy~~L~ 221 (864)
|..|+..||.+|...+++||-. =-..||++| ++++.++++||..+-
T Consensus 3 ~~~Wt~eED~~L~~~v~~~G~~--~W~~Ia~~~~~Rt~~qcr~Rw~~~L 49 (52)
T 1guu_A 3 KTRWTREEDEKLKKLVEQNGTD--DWKVIANYLPNRTDVQCQHRWQKVL 49 (52)
T ss_dssp CCCCCHHHHHHHHHHHHHHCSS--CHHHHHHTSTTCCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCC--CHHHHHHHcCCCCHHHHHHHHHHHc
Confidence 4679999999999999999972 267888888 899999999998764
No 41
>2elk_A SPCC24B10.08C protein; hypothetical protein, structural genomics, NPPSFA; NMR {Schizosaccharomyces pombe}
Probab=93.04 E-value=0.069 Score=43.90 Aligned_cols=45 Identities=22% Similarity=0.480 Sum_probs=39.3
Q ss_pred cccCCcccchhhhhHhhhcCChHHHHHHHHHHhc--CCcHHHHHHHHHh
Q 002934 174 KHEFSDGEDRILWTVFEEHGLGEEVINAVSQFIG--IATSEVQDRYSTL 220 (864)
Q Consensus 174 k~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~~--~~~sei~eRy~~L 220 (864)
+..|+..||.+|...+++||..+ -..||++|+ +++.++++||..+
T Consensus 9 ~~~WT~eED~~L~~~v~~~G~~~--W~~IA~~~~~~Rt~~qcr~r~~~~ 55 (58)
T 2elk_A 9 DENWGADEELLLIDACETLGLGN--WADIADYVGNARTKEECRDHYLKT 55 (58)
T ss_dssp CCCCCHHHHHHHHHHHHHTTTTC--HHHHHHHHCSSCCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCcCC--HHHHHHHHCCCCCHHHHHHHHHHH
Confidence 56799999999999999999643 678899996 8999999999875
No 42
>2cjj_A Radialis; plant development, DNA-binding protein, MYB transcription FA DNA-binding, nuclear protein, floral asymmetry; 1.9A {Antirrhinum majus} SCOP: a.4.1.3
Probab=92.38 E-value=0.091 Score=47.61 Aligned_cols=50 Identities=18% Similarity=0.256 Sum_probs=43.2
Q ss_pred cccCCcccchhhhhHhhhcCChH-HHHHHHHHHh-cCCcHHHHHHHHHhHhh
Q 002934 174 KHEFSDGEDRILWTVFEEHGLGE-EVINAVSQFI-GIATSEVQDRYSTLKEK 223 (864)
Q Consensus 174 k~~f~~~ed~~~~~~~~e~g~sd-~v~~~l~~~~-~~~~sei~eRy~~L~~k 223 (864)
+..|+..||.+|..+++.||... .=.+.||++| ++|..|+++||+.|.+.
T Consensus 8 ~~~WT~eEd~~L~~al~~~~~~~~~rW~~IA~~vpGRT~~q~k~ry~~l~~d 59 (93)
T 2cjj_A 8 GRPWSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVED 59 (93)
T ss_dssp CCSCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHSTTCCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 56799999999999999998742 3478999999 79999999999999753
No 43
>2cqq_A RSGI RUH-037, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=92.38 E-value=0.095 Score=45.31 Aligned_cols=50 Identities=14% Similarity=0.199 Sum_probs=43.5
Q ss_pred cccCCcccchhhhhHhhhcCCh-HHHHHHHHHHhcCCcHHHHHHHHHhHhh
Q 002934 174 KHEFSDGEDRILWTVFEEHGLG-EEVINAVSQFIGIATSEVQDRYSTLKEK 223 (864)
Q Consensus 174 k~~f~~~ed~~~~~~~~e~g~s-d~v~~~l~~~~~~~~sei~eRy~~L~~k 223 (864)
...|+..||.+|-.+++.|+-. ..=.+.||++|+++..||++||+.|.+.
T Consensus 8 ~~~WT~eE~k~fe~al~~~p~~t~~RW~~IA~~lgRt~~eV~~~y~~L~~d 58 (72)
T 2cqq_A 8 APEWTEEDLSQLTRSMVKFPGGTPGRWEKIAHELGRSVTDVTTKAKQLKDS 58 (72)
T ss_dssp CCCCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHHTSCHHHHHHHHHHHHHS
T ss_pred CCCCCHHHHHHHHHHHHHCCCCCCcHHHHHHHHhCCCHHHHHHHHHHHHHh
Confidence 3569999999999999999863 2347999999999999999999999874
No 44
>1ug2_A 2610100B20RIK gene product; hypothetical protein, MYB-like DNA binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: a.4.1.3
Probab=91.87 E-value=0.091 Score=47.46 Aligned_cols=47 Identities=23% Similarity=0.423 Sum_probs=43.7
Q ss_pred cCCcccchhhhhHhhhcCChHHHHHHHHHHh-cCCcHHHHHHHHHhHh
Q 002934 176 EFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLKE 222 (864)
Q Consensus 176 ~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~-~~~~sei~eRy~~L~~ 222 (864)
..+..+|++|=...|+-|-+.+-|..||+.| ..++.||++||..|..
T Consensus 35 lWTRe~DR~IL~~cQ~~G~s~~tFa~iA~~L~Nks~nqV~~RFq~Lm~ 82 (95)
T 1ug2_A 35 LWTREADRVILTMCQEQGAQPHTFSVISQQLGNKTPVEVSHRFRELMQ 82 (95)
T ss_dssp SSCHHHHHHHHHHHHHTTSCTTTHHHHHHHHSSCCHHHHHHHHHHHHH
T ss_pred EeccccCHHHHHHHHhcCCChhHHHHHHHHHccCCHHHHHHHHHHHHH
Confidence 4778899999999999999999999999999 5999999999999865
No 45
>1w0t_A Telomeric repeat binding factor 1; telomere, DNA-binding protein, homeodomain, mitosis, cell cycle; 2.00A {Homo sapiens} SCOP: a.4.1.4 PDB: 1ba5_A
Probab=91.43 E-value=0.14 Score=41.06 Aligned_cols=47 Identities=19% Similarity=0.251 Sum_probs=39.3
Q ss_pred cccCCcccchhhhhHhhhcCChHHHHHHHHHHhc---CCcHHHHHHHHHhHh
Q 002934 174 KHEFSDGEDRILWTVFEEHGLGEEVINAVSQFIG---IATSEVQDRYSTLKE 222 (864)
Q Consensus 174 k~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~~---~~~sei~eRy~~L~~ 222 (864)
|.-|+..||.+|...+++||.. =-..|+++|. +++.++++||..|..
T Consensus 2 r~~WT~eEd~~L~~~v~~~G~~--~W~~Ia~~~~~~~Rt~~qcr~Rw~~~~k 51 (53)
T 1w0t_A 2 RQAWLWEEDKNLRSGVRKYGEG--NWSKILLHYKFNNRTSVMLKDRWRTMKK 51 (53)
T ss_dssp CCCCCHHHHHHHHHHHHHHCTT--CHHHHHHHSCCSSCCHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHHCcC--CHHHHHHHcCCCCCCHHHHHHHHHHHHc
Confidence 4679999999999999999953 2566777775 999999999998865
No 46
>2k9n_A MYB24; R2R3 domain, DNA-binding, nucleus, DNA binding protein; NMR {Trichomonas vaginalis} PDB: 2kdz_A
Probab=90.97 E-value=0.22 Score=45.37 Aligned_cols=48 Identities=21% Similarity=0.397 Sum_probs=43.1
Q ss_pred ccccCCcccchhhhhHhhhcCChHHHHHHHHHHh-cCCcHHHHHHHHHhHhh
Q 002934 173 EKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLKEK 223 (864)
Q Consensus 173 ek~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~-~~~~sei~eRy~~L~~k 223 (864)
.+..|++.||.+|-...++||-. -..||++| ++++.+|+.||..|..+
T Consensus 52 ~~~~WT~eEd~~L~~~~~~~G~~---W~~Ia~~l~gRt~~~~k~rw~~l~r~ 100 (107)
T 2k9n_A 52 RTDPWSPEEDMLLDQKYAEYGPK---WNKISKFLKNRSDNNIRNRWMMIARH 100 (107)
T ss_dssp TTCCCCHHHHHHHHHHHHHTCSC---HHHHHHHHSSSCHHHHHHHHHHHHHH
T ss_pred cccccCHHHHHHHHHHHHHhCcC---HHHHHHHCCCCCHHHHHHHHHHHHhh
Confidence 46789999999999999999974 78889999 99999999999999765
No 47
>3osg_A MYB21; transcription-DNA complex, MYB2, R2R3 domain, DNA binding PR transcription factor; 2.00A {Trichomonas vaginalis} PDB: 3osf_A
Probab=90.83 E-value=0.17 Score=47.53 Aligned_cols=51 Identities=22% Similarity=0.427 Sum_probs=44.7
Q ss_pred CccccccCCcccchhhhhHhhhcCChHHHHHHHHHHh-cCCcHHHHHHHHHhHhh
Q 002934 170 PEEEKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLKEK 223 (864)
Q Consensus 170 ~eeek~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~-~~~~sei~eRy~~L~~k 223 (864)
|.--+..|+..||.+|....++||-. -..||++| +++..+|+.||..|..+
T Consensus 58 p~~~~~~WT~eEd~~L~~~v~~~G~~---W~~Ia~~l~gRt~~~~k~rw~~l~~k 109 (126)
T 3osg_A 58 PSISHTPWTAEEDALLVQKIQEYGRQ---WAIIAKFFPGRTDIHIKNRWVTISNK 109 (126)
T ss_dssp TTSCCSCCCHHHHHHHHHHHHHHCSC---HHHHHTTSTTCCHHHHHHHHHHHHHH
T ss_pred cccccccCCHHHHHHHHHHHHHHCcC---HHHHHHHcCCCCHHHHHHHHHHHHHh
Confidence 33345679999999999999999975 78899999 99999999999999876
No 48
>1gvd_A MYB proto-oncogene protein; transcription, transcription regulation, C-MYB, DNA binding, ION binding, nuclear protein; 1.45A {Mus musculus} SCOP: a.4.1.3 PDB: 1gv5_A 1mbg_A 1mbh_A
Probab=90.59 E-value=0.14 Score=40.85 Aligned_cols=46 Identities=15% Similarity=0.296 Sum_probs=39.4
Q ss_pred cccCCcccchhhhhHhhhcCChHHHHHHHHHHh-cCCcHHHHHHHHHhH
Q 002934 174 KHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLK 221 (864)
Q Consensus 174 k~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~-~~~~sei~eRy~~L~ 221 (864)
|..|+..||.+|...+++||-. =-..||++| +++..++++||...-
T Consensus 3 k~~Wt~eED~~L~~~v~~~G~~--~W~~Ia~~~~~Rt~~qcr~Rw~~~L 49 (52)
T 1gvd_A 3 KGPWTKEEDQRLIKLVQKYGPK--RWSVIAKHLKGRIGKQCRERWHNHL 49 (52)
T ss_dssp CCSCCHHHHHHHHHHHHHHCTT--CHHHHHTTSTTCCHHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHHHHHCcC--hHHHHHHHcCCCCHHHHHHHHHHHc
Confidence 5679999999999999999952 267888888 899999999998653
No 49
>1gv2_A C-MYB, MYB proto-oncogene protein; transcription, DNA binding, ION binding; 1.68A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 PDB: 1mse_C* 1msf_C* 1a5j_A 1idy_A 1idz_A 1mbj_A 1mbk_A
Probab=90.25 E-value=0.19 Score=45.38 Aligned_cols=51 Identities=18% Similarity=0.492 Sum_probs=43.8
Q ss_pred CccccccCCcccchhhhhHhhhcCChHHHHHHHHHHh-cCCcHHHHHHHHHhHhh
Q 002934 170 PEEEKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLKEK 223 (864)
Q Consensus 170 ~eeek~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~-~~~~sei~eRy~~L~~k 223 (864)
|.-.+..|+..||.+|-...++||-. -..||++| ++++.+|+.||..|..+
T Consensus 52 p~~~~~~Wt~eEd~~L~~~~~~~G~~---W~~Ia~~l~gRt~~~~k~rw~~~~~~ 103 (105)
T 1gv2_A 52 PEVKKTSWTEEEDRIIYQAHKRLGNR---WAEIAKLLPGRTDNAIKNHWNSTMRR 103 (105)
T ss_dssp CCCCCCCCCHHHHHHHHHHHHHHSSC---HHHHHTTCTTCCHHHHHHHHHHHTC-
T ss_pred CcccccCCCHHHHHHHHHHHHHhCCC---HHHHHHHcCCCCHHHHHHHHHHHHhc
Confidence 33457789999999999999999964 78899999 99999999999988654
No 50
>2iw5_B Protein corest, REST corepressor 1; oxidoreductase-transcription regulator complex, oxidoreductase/repressor complex, histone demethylase, FAD; HET: FAD; 2.57A {Homo sapiens} SCOP: a.4.1.3 PDB: 2uxn_B* 2uxx_B* 2y48_B* 2v1d_B* 2x0l_B*
Probab=90.12 E-value=0.27 Score=51.14 Aligned_cols=44 Identities=20% Similarity=0.482 Sum_probs=40.0
Q ss_pred CCCCcHHHHHHHHHhHhhcCCchHHHHHhhhCCCCcHHHHHHHHhh
Q 002934 497 SSEWKPIEKELYLKGVEIFGRNSCLIARNLLSGLKTCMEVSTYMRD 542 (864)
Q Consensus 497 ~~~W~~~E~~l~~k~v~ifG~N~C~iA~~ll~g~KTC~EV~~ym~~ 542 (864)
...||.-|..+|+.++..||+++..||+.| ++||-.+|-.|-..
T Consensus 133 s~~WTeEE~~lFleAl~kYGKDW~~IAk~V--gTKT~~QcKnfY~~ 176 (235)
T 2iw5_B 133 NARWTTEEQLLAVQAIRKYGRDFQAISDVI--GNKSVVQVKNFFVN 176 (235)
T ss_dssp CSSCCHHHHHHHHHHHHHHSSCHHHHHHHH--SSCCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCcCHHHHHHHc--CCCCHHHHHHHHHH
Confidence 467999999999999999999999999987 88999999887764
No 51
>3h6l_A Histone-lysine N-methyltransferase SETD2; SET domain-containing protein 2, S-adenos methionine, structural genomics, structural genomics consor SGC; HET: SAM; 1.99A {Homo sapiens} PDB: 4fmu_A* 4h12_A*
Probab=89.57 E-value=0.15 Score=54.25 Aligned_cols=38 Identities=26% Similarity=0.558 Sum_probs=31.4
Q ss_pred CcCCCCCC-----------CCCCCCcccCCCccccCCCCCCcccccccc
Q 002934 616 YTPCGCQS-----------MCGKQCPCLHNGTCCEKYCGCSKSCKNRFR 653 (864)
Q Consensus 616 y~PC~c~~-----------~C~~~C~C~~~g~~Ce~~CgC~~~C~nRf~ 653 (864)
.+-|+|.. .|+.+|.+...-..|...|+|+..|.||..
T Consensus 63 ~~~C~C~~~~~~~~~~~~~~C~~~C~nr~~~~EC~~~C~C~~~C~Nr~~ 111 (278)
T 3h6l_A 63 RMQCECTPLSKDERAQGEIACGEDCLNRLLMIECSSRCPNGDYCSNRRF 111 (278)
T ss_dssp --CCCCCCCCHHHHHHTCCSSCTTCTTGGGTBCCCTTCTTGGGCSSCTT
T ss_pred cceeeccCCCcccccccCCCCCCCCCCcceEeccCCCCCcCCCCCCccc
Confidence 56799974 799999999888999999999999999853
No 52
>2yus_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; SWI/SNF complex 155 kDa subunit, BRG1-associated factor 155; NMR {Homo sapiens}
Probab=89.37 E-value=0.13 Score=45.20 Aligned_cols=47 Identities=19% Similarity=0.217 Sum_probs=41.3
Q ss_pred ccccCCcccchhhhhHhhhcCChHHHHHHHHHHh-cCCcHHHHHHHHHhHh
Q 002934 173 EKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLKE 222 (864)
Q Consensus 173 ek~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~-~~~~sei~eRy~~L~~ 222 (864)
.+..|+..||.+|-.+++.|| .=...||++| ++++.++++||..|-.
T Consensus 17 ~~~~WT~eEd~~Ll~~v~~~G---~~W~~IA~~v~~RT~~qcr~r~~~~~i 64 (79)
T 2yus_A 17 AGREWTEQETLLLLEALEMYK---DDWNKVSEHVGSRTQDECILHFLRLPI 64 (79)
T ss_dssp CSCCCCHHHHHHHHHHHHHSS---SCHHHHHHHHSSCCHHHHHHHHTTSCC
T ss_pred cCCCcCHHHHHHHHHHHHHhC---CCHHHHHHHcCCCCHHHHHHHHHHhcc
Confidence 467899999999999999999 3478899999 6999999999998843
No 53
>4a69_C Nuclear receptor corepressor 2; transcription, hydrolase; HET: I0P; 2.06A {Homo sapiens} PDB: 1xc5_A
Probab=88.86 E-value=0.5 Score=42.72 Aligned_cols=43 Identities=30% Similarity=0.295 Sum_probs=38.8
Q ss_pred CCCCcHHHHHHHHHhHhhcCCchHHHHHhhhCCCCcHHHHHHHHh
Q 002934 497 SSEWKPIEKELYLKGVEIFGRNSCLIARNLLSGLKTCMEVSTYMR 541 (864)
Q Consensus 497 ~~~W~~~E~~l~~k~v~ifG~N~C~iA~~ll~g~KTC~EV~~ym~ 541 (864)
...||.-|+.+|..+...||+++-.||..| +.||-.++-.|..
T Consensus 43 ~~~WT~eE~~~F~~~~~~~gK~F~~Ia~~l--~~Kt~~~cV~~YY 85 (94)
T 4a69_C 43 MNMWSEQEKETFREKFMQHPKNFGLIASFL--ERKTVAECVLYYY 85 (94)
T ss_dssp TCCCCHHHHHHHHHHHHHSTTCHHHHHHTC--TTCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCHHHHHHHc--CCCCHHHHHHHHh
Confidence 578999999999999999999999999865 8899999987665
No 54
>2dim_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=87.74 E-value=0.35 Score=40.86 Aligned_cols=48 Identities=13% Similarity=0.244 Sum_probs=40.5
Q ss_pred ccccCCcccchhhhhHhhhcCChHHHHHHHHHHh-cCCcHHHHHHHHHhHh
Q 002934 173 EKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLKE 222 (864)
Q Consensus 173 ek~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~-~~~~sei~eRy~~L~~ 222 (864)
-+.-|+..||.+|...++.||... -..||++| +++..++++||...-.
T Consensus 8 k~~~Wt~eED~~L~~~v~~~G~~~--W~~Ia~~l~~Rt~~qcr~Rw~~~L~ 56 (70)
T 2dim_A 8 KGGVWRNTEDEILKAAVMKYGKNQ--WSRIASLLHRKSAKQCKARWYEWLD 56 (70)
T ss_dssp TTCCCCHHHHHHHHHHHHHTCSSC--HHHHHHHSTTCCHHHHHHHHHHTSC
T ss_pred CCCCCCHHHHHHHHHHHHHHCcCC--HHHHHHHhcCCCHHHHHHHHHHHcC
Confidence 466899999999999999999532 57788888 6999999999987644
No 55
>1ity_A TRF1; helix-turn-helix, telomeres, DNA binding, MYB domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: a.4.1.4 PDB: 1iv6_A
Probab=87.21 E-value=0.39 Score=40.52 Aligned_cols=51 Identities=18% Similarity=0.238 Sum_probs=41.7
Q ss_pred ccccccCCcccchhhhhHhhhcCChHHHHHHHHHHh---cCCcHHHHHHHHHhHhh
Q 002934 171 EEEKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI---GIATSEVQDRYSTLKEK 223 (864)
Q Consensus 171 eeek~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~---~~~~sei~eRy~~L~~k 223 (864)
---+.-|+..||.+|...+++||.. =-..|+++| +++..++++||..+...
T Consensus 7 ~~~r~~WT~eED~~L~~~v~~~G~~--~W~~Ia~~~~~~~Rt~~qcr~Rw~~~l~p 60 (69)
T 1ity_A 7 ARKRQAWLWEEDKNLRSGVRKYGEG--NWSKILLHYKFNNRTSVMLKDRWRTMKKL 60 (69)
T ss_dssp SSSCCCCCHHHHHHHHHHHHHHCSS--CHHHHHHHSCCSSCCHHHHHHHHHHHHHT
T ss_pred CCCCCCCCHHHHHHHHHHHHHHCCC--cHHHHHHHcCcCCCCHHHHHHHHHHHcCC
Confidence 3456789999999999999999953 246667777 49999999999998764
No 56
>2ltp_A Nuclear receptor corepressor 2; SMRT, TRAC, SGC, structural genomics consortium, NESG, north structural genomics consortium; NMR {Homo sapiens}
Probab=87.06 E-value=0.12 Score=46.19 Aligned_cols=51 Identities=16% Similarity=0.208 Sum_probs=43.3
Q ss_pred CccccccCCcccchhhhhHhhhcCChHHHHHHHHHHh-cCCcHHHHHHHHHhHhh
Q 002934 170 PEEEKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLKEK 223 (864)
Q Consensus 170 ~eeek~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~-~~~~sei~eRy~~L~~k 223 (864)
|.--+..|+..||.+|-..+++||-. ...||++| ++|..+|++||..+..+
T Consensus 12 p~~~~~~WT~eEd~~l~~~~~~~G~~---W~~IA~~l~gRt~~q~k~r~~~~lrk 63 (89)
T 2ltp_A 12 ENLYFQGWTEEEMGTAKKGLLEHGRN---WSAIARMVGSKTVSQCKNFYFNYKKR 63 (89)
Confidence 33446679999999999999999983 88999999 89999999999876553
No 57
>1h8a_C AMV V-MYB, MYB transforming protein; transcription/DNA; 2.23A {Avian myeloblastosis virus} SCOP: a.4.1.3 a.4.1.3
Probab=87.06 E-value=0.34 Score=45.44 Aligned_cols=50 Identities=18% Similarity=0.454 Sum_probs=43.6
Q ss_pred ccccccCCcccchhhhhHhhhcCChHHHHHHHHHHh-cCCcHHHHHHHHHhHhh
Q 002934 171 EEEKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLKEK 223 (864)
Q Consensus 171 eeek~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~-~~~~sei~eRy~~L~~k 223 (864)
.-.+..|++.||.+|-...++||-. -..||++| ++++.+|+.||..|..+
T Consensus 76 ~~~~~~WT~eEd~~L~~~~~~~G~~---W~~Ia~~l~gRt~~~~k~r~~~~~~~ 126 (128)
T 1h8a_C 76 EVKKTSWTEEEDRIIYQAHKRLGNR---WAEIAKLLPGRTDNAVKNHWNSTMRR 126 (128)
T ss_dssp SSCCSCCCHHHHHHHHHHHHHHCSC---HHHHGGGSTTCCHHHHHHHHHTTTTC
T ss_pred ccccccCCHHHHHHHHHHHHHHCcC---HHHHHHHCCCCCHHHHHHHHHHHHhc
Confidence 3356789999999999999999964 77889999 99999999999988654
No 58
>2yus_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; SWI/SNF complex 155 kDa subunit, BRG1-associated factor 155; NMR {Homo sapiens}
Probab=85.31 E-value=1.4 Score=38.59 Aligned_cols=43 Identities=21% Similarity=0.331 Sum_probs=37.9
Q ss_pred CCCCcHHHHHHHHHhHhhcCCchHHHHHhhhCCCCcHHHHHHHHh
Q 002934 497 SSEWKPIEKELYLKGVEIFGRNSCLIARNLLSGLKTCMEVSTYMR 541 (864)
Q Consensus 497 ~~~W~~~E~~l~~k~v~ifG~N~C~iA~~ll~g~KTC~EV~~ym~ 541 (864)
...||.-|..+|+.+|..||.|.-.||..| +.||=.|+-.+..
T Consensus 18 ~~~WT~eEd~~Ll~~v~~~G~~W~~IA~~v--~~RT~~qcr~r~~ 60 (79)
T 2yus_A 18 GREWTEQETLLLLEALEMYKDDWNKVSEHV--GSRTQDECILHFL 60 (79)
T ss_dssp SCCCCHHHHHHHHHHHHHSSSCHHHHHHHH--SSCCHHHHHHHHT
T ss_pred CCCcCHHHHHHHHHHHHHhCCCHHHHHHHc--CCCCHHHHHHHHH
Confidence 568999999999999999999999999976 7799888876554
No 59
>2cu7_A KIAA1915 protein; nuclear protein, SANT domain, DNA binding, regulation of transcription, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=84.67 E-value=1.7 Score=36.95 Aligned_cols=40 Identities=35% Similarity=0.629 Sum_probs=35.0
Q ss_pred CCCCcHHHHHHHHHhHhhcCCchHHHHHhhhCCCCcHHHHHH
Q 002934 497 SSEWKPIEKELYLKGVEIFGRNSCLIARNLLSGLKTCMEVST 538 (864)
Q Consensus 497 ~~~W~~~E~~l~~k~v~ifG~N~C~iA~~ll~g~KTC~EV~~ 538 (864)
...||.-|..+++.+|..||.+.-.||..| +.+|=.+|-.
T Consensus 9 ~~~WT~eEd~~l~~~~~~~G~~W~~Ia~~~--~~Rt~~q~k~ 48 (72)
T 2cu7_A 9 SVKWTIEEKELFEQGLAKFGRRWTKISKLI--GSRTVLQVKS 48 (72)
T ss_dssp CCCCCHHHHHHHHHHHHHTCSCHHHHHHHH--SSSCHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCcCHHHHHHHc--CCCCHHHHHH
Confidence 568999999999999999999999999976 5688777754
No 60
>2k9n_A MYB24; R2R3 domain, DNA-binding, nucleus, DNA binding protein; NMR {Trichomonas vaginalis} PDB: 2kdz_A
Probab=84.57 E-value=0.59 Score=42.52 Aligned_cols=46 Identities=20% Similarity=0.296 Sum_probs=38.6
Q ss_pred cccCCcccchhhhhHhhhcCChHHHHHHHHHHh-cCCcHHHHHHHHHhH
Q 002934 174 KHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLK 221 (864)
Q Consensus 174 k~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~-~~~~sei~eRy~~L~ 221 (864)
|.-|+..||.+|...++.||..+ -..||++| ++++.++.+||...-
T Consensus 1 K~~Wt~eED~~L~~~v~~~g~~~--W~~Ia~~~~~Rt~~qcr~Rw~~~L 47 (107)
T 2k9n_A 1 KVKFTEEEDLKLQQLVMRYGAKD--WIRISQLMITRNPRQCRERWNNYI 47 (107)
T ss_dssp CCSSCHHHHHHHHHHHHHHCSSC--HHHHHHHTTTSCHHHHHHHHHHHS
T ss_pred CCCCCHHHHHHHHHHHHHHCCCC--HHHHhhhcCCCCHHHHHHHHHHHH
Confidence 55799999999999999999632 57788888 799999999997643
No 61
>1x41_A Transcriptional adaptor 2-like, isoform B; transcriptional adaptor protein2, transcriptional activation, MYB domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=84.50 E-value=1.6 Score=35.84 Aligned_cols=40 Identities=25% Similarity=0.239 Sum_probs=34.3
Q ss_pred CCCCcHHHHHHHHHhHhhcC-CchHHHHHhhhCCCCcHHHHHH
Q 002934 497 SSEWKPIEKELYLKGVEIFG-RNSCLIARNLLSGLKTCMEVST 538 (864)
Q Consensus 497 ~~~W~~~E~~l~~k~v~ifG-~N~C~iA~~ll~g~KTC~EV~~ 538 (864)
...||+-|-.+++.+|..|| .|.-.||..| +.+|=.|+-.
T Consensus 8 ~~~WT~eED~~L~~~v~~~G~~~W~~Ia~~~--~~Rt~~qcr~ 48 (60)
T 1x41_A 8 DPSWTAQEEMALLEAVMDCGFGNWQDVANQM--CTKTKEECEK 48 (60)
T ss_dssp CSSSCHHHHHHHHHHHHHTCTTCHHHHHHHH--TTSCHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCcCcHHHHHHHh--CCCCHHHHHH
Confidence 56799999999999999999 7999999987 5687666644
No 62
>3zqc_A MYB3; transcription-DNA complex, DNA-binding protein, nucleus; 2.90A {Trichomonas vaginalis}
Probab=83.82 E-value=0.98 Score=42.53 Aligned_cols=51 Identities=18% Similarity=0.381 Sum_probs=44.1
Q ss_pred ccccccCCcccchhhhhHhhhcCChHHHHHHHHHHh-cCCcHHHHHHHHHhHhhc
Q 002934 171 EEEKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLKEKY 224 (864)
Q Consensus 171 eeek~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~-~~~~sei~eRy~~L~~k~ 224 (864)
.--+..|+..||.+|-...++||-. -..||++| +++..+|+.||..+..+.
T Consensus 51 ~~~~~~Wt~eEd~~L~~~~~~~G~~---W~~Ia~~l~gRt~~~~k~rw~~~l~~~ 102 (131)
T 3zqc_A 51 AVVKHAWTPEEDETIFRNYLKLGSK---WSVIAKLIPGRTDNAIKNRWNSSISKR 102 (131)
T ss_dssp TCCCSCCCHHHHHHHHHHHHHSCSC---HHHHTTTSTTCCHHHHHHHHHHTTGGG
T ss_pred cccCCCCCHHHHHHHHHHHHHHCcC---HHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 3346689999999999999999975 78899999 999999999999887654
No 63
>1gv2_A C-MYB, MYB proto-oncogene protein; transcription, DNA binding, ION binding; 1.68A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 PDB: 1mse_C* 1msf_C* 1a5j_A 1idy_A 1idz_A 1mbj_A 1mbk_A
Probab=83.74 E-value=0.54 Score=42.40 Aligned_cols=46 Identities=13% Similarity=0.297 Sum_probs=40.2
Q ss_pred cccCCcccchhhhhHhhhcCChHHHHHHHHHHh-cCCcHHHHHHHHHhH
Q 002934 174 KHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLK 221 (864)
Q Consensus 174 k~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~-~~~~sei~eRy~~L~ 221 (864)
|..|+..||.+|...++.||... -..||++| ++++.++.+||...-
T Consensus 4 k~~WT~eED~~L~~~v~~~g~~~--W~~Ia~~l~~Rt~~qcr~Rw~~~l 50 (105)
T 1gv2_A 4 KGPWTKEEDQRVIKLVQKYGPKR--WSVIAKHLKGRIGKQCRERWHNHL 50 (105)
T ss_dssp CSCCCHHHHHHHHHHHHHHCTTC--HHHHHTTSTTCCHHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHHHHhCCCc--HHHHhhhhcCCCHHHHHHHHHhcc
Confidence 56799999999999999999732 67889999 899999999998754
No 64
>2yum_A ZZZ3 protein, zinc finger ZZ-type-containing protein 3; transcription, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=81.92 E-value=1.7 Score=36.96 Aligned_cols=40 Identities=23% Similarity=0.259 Sum_probs=34.4
Q ss_pred CCCCcHHHHHHHHHhHhhcC------CchHHHHHhhhCCCCcHHHHHH
Q 002934 497 SSEWKPIEKELYLKGVEIFG------RNSCLIARNLLSGLKTCMEVST 538 (864)
Q Consensus 497 ~~~W~~~E~~l~~k~v~ifG------~N~C~iA~~ll~g~KTC~EV~~ 538 (864)
...||.-|..+++.+|..|| .+.-.||..| +.+|=.||-.
T Consensus 8 ~~~WT~eEd~~L~~~v~~~g~~~~~~~~W~~IA~~~--~~Rt~~qcr~ 53 (75)
T 2yum_A 8 NQLWTVEEQKKLEQLLIKYPPEEVESRRWQKIADEL--GNRTAKQVAS 53 (75)
T ss_dssp SSCCCHHHHHHHHHHHHHSCCCSCHHHHHHHHHHHH--SSSCHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHh--CCCCHHHHHH
Confidence 56899999999999999999 7899999987 6688777744
No 65
>1h89_C C-MYB, MYB proto-oncogene protein; transcription/DNA; 2.45A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 a.4.1.3 PDB: 1h88_C
Probab=81.78 E-value=0.76 Score=44.54 Aligned_cols=51 Identities=18% Similarity=0.492 Sum_probs=43.9
Q ss_pred CccccccCCcccchhhhhHhhhcCChHHHHHHHHHHh-cCCcHHHHHHHHHhHhh
Q 002934 170 PEEEKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLKEK 223 (864)
Q Consensus 170 ~eeek~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~-~~~~sei~eRy~~L~~k 223 (864)
|.-.+..|++.||.+|-...++||-. -..||++| ++|+.+|+.||+.|..+
T Consensus 106 p~~~~~~WT~eEd~~L~~~~~~~g~~---W~~Ia~~l~gRt~~~~knr~~~~~r~ 157 (159)
T 1h89_C 106 PEVKKTSWTEEEDRIIYQAHKRLGNR---WAEIAKLLPGRTDNAIKNHWNSTMRR 157 (159)
T ss_dssp TTSCCSCCCHHHHHHHHHHHHHHCSC---HHHHHTTSTTCCHHHHHHHHHTTTCC
T ss_pred ccccccCCChHHHHHHHHHHHHHCCC---HHHHHHHCCCCCHHHHHHHHHHHHhc
Confidence 34457789999999999999999964 67888999 99999999999988654
No 66
>2elk_A SPCC24B10.08C protein; hypothetical protein, structural genomics, NPPSFA; NMR {Schizosaccharomyces pombe}
Probab=81.47 E-value=2.1 Score=34.98 Aligned_cols=40 Identities=28% Similarity=0.371 Sum_probs=33.8
Q ss_pred CCCCcHHHHHHHHHhHhhcC-CchHHHHHhhhCC-CCcHHHHHH
Q 002934 497 SSEWKPIEKELYLKGVEIFG-RNSCLIARNLLSG-LKTCMEVST 538 (864)
Q Consensus 497 ~~~W~~~E~~l~~k~v~ifG-~N~C~iA~~ll~g-~KTC~EV~~ 538 (864)
...||+-|-.+++.+|..|| .|.-.||+.| + .+|=.|+-.
T Consensus 9 ~~~WT~eED~~L~~~v~~~G~~~W~~IA~~~--~~~Rt~~qcr~ 50 (58)
T 2elk_A 9 DENWGADEELLLIDACETLGLGNWADIADYV--GNARTKEECRD 50 (58)
T ss_dssp CCCCCHHHHHHHHHHHHHTTTTCHHHHHHHH--CSSCCHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCcCCHHHHHHHH--CCCCCHHHHHH
Confidence 46799999999999999999 8999999976 5 677666543
No 67
>1h8a_C AMV V-MYB, MYB transforming protein; transcription/DNA; 2.23A {Avian myeloblastosis virus} SCOP: a.4.1.3 a.4.1.3
Probab=80.37 E-value=1.2 Score=41.69 Aligned_cols=52 Identities=15% Similarity=0.306 Sum_probs=43.5
Q ss_pred CCccccccCCcccchhhhhHhhhcCChHHHHHHHHHHh-cCCcHHHHHHHHHhHh
Q 002934 169 EPEEEKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLKE 222 (864)
Q Consensus 169 e~eeek~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~-~~~~sei~eRy~~L~~ 222 (864)
.|.-.|..|+..||.+|...+++||... -..||++| ++++.++.+||..+-.
T Consensus 22 ~p~~~k~~Wt~eED~~L~~~v~~~g~~~--W~~Ia~~l~~Rt~~qcr~Rw~~~l~ 74 (128)
T 1h8a_C 22 NPELNKGPWTKEEDQRVIEHVQKYGPKR--WSDIAKHLKGRIGKQCRERWHNHLN 74 (128)
T ss_dssp CTTCCCSCCCHHHHHHHHHHHHHTCSCC--HHHHHHHSSSCCHHHHHHHHHHTTC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCCCC--HHHHHHHhcCCcHHHHHHHHHHhcc
Confidence 3555678899999999999999999632 67888888 8999999999987543
No 68
>3osg_A MYB21; transcription-DNA complex, MYB2, R2R3 domain, DNA binding PR transcription factor; 2.00A {Trichomonas vaginalis} PDB: 3osf_A
Probab=80.37 E-value=0.93 Score=42.47 Aligned_cols=47 Identities=19% Similarity=0.350 Sum_probs=41.0
Q ss_pred cccccCCcccchhhhhHhhhcCChHHHHHHHHHHh-cCCcHHHHHHHHHhH
Q 002934 172 EEKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLK 221 (864)
Q Consensus 172 eek~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~-~~~~sei~eRy~~L~ 221 (864)
--|.-|+..||.+|...++.||. --..||++| ++++.++.+||...-
T Consensus 9 ~kk~~WT~eED~~L~~~v~~~G~---~W~~Ia~~~~~Rt~~qcr~Rw~~~l 56 (126)
T 3osg_A 9 AKKQKFTPEEDEMLKRAVAQHGS---DWKMIAATFPNRNARQCRDRWKNYL 56 (126)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHTT---CHHHHHHTCTTCCHHHHHHHHHHHT
T ss_pred CCCCCCCHHHHHHHHHHHHHhCC---CHHHHHHHcCCCCHHHHHHHHhhhc
Confidence 34677999999999999999997 378889888 999999999998754
No 69
>1ign_A Protein (RAP1); RAP1,yeast,telomeres,homoeodomain, DNA binding protein/DNA complex; HET: DNA; 2.25A {Saccharomyces cerevisiae} SCOP: a.4.1.6 a.4.1.6 PDB: 3ukg_A
Probab=79.28 E-value=0.84 Score=47.87 Aligned_cols=52 Identities=17% Similarity=0.394 Sum_probs=45.0
Q ss_pred ccccCCcccchhhhhHhhhcCC---hHHHHHHHHHHh-cCCcHHHHHHHHHhHhhc
Q 002934 173 EKHEFSDGEDRILWTVFEEHGL---GEEVINAVSQFI-GIATSEVQDRYSTLKEKY 224 (864)
Q Consensus 173 ek~~f~~~ed~~~~~~~~e~g~---sd~v~~~l~~~~-~~~~sei~eRy~~L~~k~ 224 (864)
-|..|++.||.+|-...+++|- +..-...||++| ++|.-.|++||+.+-.+.
T Consensus 7 ~k~~FT~EED~~Ile~v~k~Gn~r~ghk~W~~IAk~LpGRT~nsIRnRw~~~L~~~ 62 (246)
T 1ign_A 7 NKASFTDEEDEFILDVVRKNPTRRTTHTLYDEISHYVPNHTGNSIRHRFRVYLSKR 62 (246)
T ss_dssp -CCCCCHHHHHHHHHHHHTSGGGTTCSHHHHHHTTTSTTSCHHHHHHHHHHTTGGG
T ss_pred CCCCCCHHHHHHHHHHHHHhCcCccccccHHHHHHHcCCCCHHHHHHHHHHHHhhh
Confidence 3568999999999999999998 456789999999 999999999999976653
No 70
>1guu_A C-MYB, MYB proto-oncogene protein; transcription, transcription regulation, DNA binding, ION bindi proto-oncogene, nuclear protein, activator; 1.6A {Mus musculus} SCOP: a.4.1.3 PDB: 1mbe_A 1mbf_A
Probab=79.24 E-value=2.8 Score=33.10 Aligned_cols=40 Identities=28% Similarity=0.262 Sum_probs=33.0
Q ss_pred CCCCcHHHHHHHHHhHhhcCC-chHHHHHhhhCCCCcHHHHHH
Q 002934 497 SSEWKPIEKELYLKGVEIFGR-NSCLIARNLLSGLKTCMEVST 538 (864)
Q Consensus 497 ~~~W~~~E~~l~~k~v~ifG~-N~C~iA~~ll~g~KTC~EV~~ 538 (864)
...||+-|..+++.+|..||. +.-.||..| +.+|=.++-.
T Consensus 3 ~~~Wt~eED~~L~~~v~~~G~~~W~~Ia~~~--~~Rt~~qcr~ 43 (52)
T 1guu_A 3 KTRWTREEDEKLKKLVEQNGTDDWKVIANYL--PNRTDVQCQH 43 (52)
T ss_dssp CCCCCHHHHHHHHHHHHHHCSSCHHHHHHTS--TTCCHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCHHHHHHHc--CCCCHHHHHH
Confidence 467999999999999999998 999999976 4566555533
No 71
>2xag_B REST corepressor 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_B* 2xah_B* 2xaj_B* 2xaq_B* 2xas_B*
Probab=78.95 E-value=1.7 Score=49.66 Aligned_cols=44 Identities=20% Similarity=0.482 Sum_probs=40.6
Q ss_pred CCCCcHHHHHHHHHhHhhcCCchHHHHHhhhCCCCcHHHHHHHHhh
Q 002934 497 SSEWKPIEKELYLKGVEIFGRNSCLIARNLLSGLKTCMEVSTYMRD 542 (864)
Q Consensus 497 ~~~W~~~E~~l~~k~v~ifG~N~C~iA~~ll~g~KTC~EV~~ym~~ 542 (864)
...||.-|..+|+.++..||+|+-.||+.+ |+||-.+|-.|...
T Consensus 380 ~~~WT~eE~~~f~~al~~yGkdw~~IA~~V--gTKT~~Qvk~fy~~ 423 (482)
T 2xag_B 380 NARWTTEEQLLAVQAIRKYGRDFQAISDVI--GNKSVVQVKNFFVN 423 (482)
T ss_dssp CSCCCHHHHHHHHHHHHHHTTCHHHHHHHH--SSCCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCcCHHHHHHHh--CCCCHHHHHHHHHH
Confidence 468999999999999999999999999987 99999999888764
No 72
>2cqr_A RSGI RUH-043, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=77.19 E-value=3.9 Score=35.36 Aligned_cols=43 Identities=14% Similarity=0.118 Sum_probs=35.2
Q ss_pred ccCCCCcHHHHHHHHHhHhhcC----CchHHHHHhhhCCCCcHHHHHHH
Q 002934 495 LCSSEWKPIEKELYLKGVEIFG----RNSCLIARNLLSGLKTCMEVSTY 539 (864)
Q Consensus 495 ~~~~~W~~~E~~l~~k~v~ifG----~N~C~iA~~ll~g~KTC~EV~~y 539 (864)
.....||.-|..+|+.++..|| .+.=.||..| +.||=.||-.+
T Consensus 16 ~~~~~WT~eEd~~L~~al~~~g~~~~~rW~~IA~~v--pGRT~~qcr~R 62 (73)
T 2cqr_A 16 SAEEPWTQNQQKLLELALQQYPRGSSDCWDKIARCV--PSKSKEDCIAR 62 (73)
T ss_dssp CSSCCCCHHHHHHHHHHHHHSCSSSHHHHHHHGGGC--SSSCHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHHHcCCCCCchHHHHHHHc--CCCCHHHHHHH
Confidence 4567899999999999999999 5788999876 56887777543
No 73
>2d9a_A B-MYB, MYB-related protein B; DNA binding, structural genomics, unknown function, NPPSFA; NMR {Mus musculus}
Probab=75.73 E-value=4.4 Score=32.97 Aligned_cols=40 Identities=20% Similarity=0.248 Sum_probs=33.4
Q ss_pred CCCCcHHHHHHHHHhHhhcC-CchHHHHHhhhCCCCcHHHHHH
Q 002934 497 SSEWKPIEKELYLKGVEIFG-RNSCLIARNLLSGLKTCMEVST 538 (864)
Q Consensus 497 ~~~W~~~E~~l~~k~v~ifG-~N~C~iA~~ll~g~KTC~EV~~ 538 (864)
...||+-|..+++.+|..|| .+.-.||..| +.+|=.++-.
T Consensus 8 k~~Wt~eED~~L~~~v~~~G~~~W~~Ia~~~--~~Rt~~qcr~ 48 (60)
T 2d9a_A 8 KVKWTHEEDEQLRALVRQFGQQDWKFLASHF--PNRTDQQCQY 48 (60)
T ss_dssp CSCCCHHHHHHHHHHHHHTCTTCHHHHHHHC--SSSCHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCHHHHHHHc--cCCCHHHHHH
Confidence 56799999999999999999 5999999986 4577666644
No 74
>1wgx_A KIAA1903 protein; MYB DNA-binding domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=74.48 E-value=1.4 Score=38.37 Aligned_cols=47 Identities=17% Similarity=0.186 Sum_probs=40.5
Q ss_pred cCCcccchhhhhHhhhcCCh-HHHHHHHHHHh-cCCcHHHHHHHHHhHh
Q 002934 176 EFSDGEDRILWTVFEEHGLG-EEVINAVSQFI-GIATSEVQDRYSTLKE 222 (864)
Q Consensus 176 ~f~~~ed~~~~~~~~e~g~s-d~v~~~l~~~~-~~~~sei~eRy~~L~~ 222 (864)
..+..|+.+|..+++.|+.. ..-.+.||++| +.+..|++.||++|..
T Consensus 10 ~WT~eE~k~fe~ALa~~~~~tp~rWe~IA~~V~gKT~eE~~~hY~~l~~ 58 (73)
T 1wgx_A 10 EWNEKELQKLHCAFASLPKHKPGFWSEVAAAVGSRSPEECQRKYMENPR 58 (73)
T ss_dssp CCCHHHHHHHHHHHHHSCSSSSSHHHHHHHHTTTSCHHHHHHHHHHSSS
T ss_pred CCCHHHHHHHHHHHHHCCCCCccHHHHHHHHcCCCCHHHHHHHHHHHHh
Confidence 48999999999999999873 33468999999 5999999999999955
No 75
>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A
Probab=73.13 E-value=1.9 Score=46.29 Aligned_cols=37 Identities=38% Similarity=1.012 Sum_probs=29.5
Q ss_pred cCCCCCC--CCCC----CCcccCCC----------------------ccccCCCCCCcccccccc
Q 002934 617 TPCGCQS--MCGK----QCPCLHNG----------------------TCCEKYCGCSKSCKNRFR 653 (864)
Q Consensus 617 ~PC~c~~--~C~~----~C~C~~~g----------------------~~Ce~~CgC~~~C~nRf~ 653 (864)
..|+|.. .|.. +|.|.... ..|...|+|+..|.||..
T Consensus 67 ~gC~C~~~~~C~~~~~~~C~C~~~~~~~~~~~y~~~g~l~~~~~~~i~EC~~~C~C~~~C~Nr~~ 131 (299)
T 1mvh_A 67 SGCNCSSLGGCDLNNPSRCECLDDLDEPTHFAYDAQGRVRADTGAVIYECNSFCSCSMECPNRVV 131 (299)
T ss_dssp CCCCCCCSSSSCTTCTTTCSSSTTCCSSCCCSBCTTSSBCTTCCSEEECCCTTSCSCTTCTTCTG
T ss_pred CCCcCcCCCCcCCCCCCCCccccccccccccccCCCCceeecCCCCeEeCCCCCCCCCCcCCccc
Confidence 5699984 8975 79998543 479999999999999864
No 76
>1gvd_A MYB proto-oncogene protein; transcription, transcription regulation, C-MYB, DNA binding, ION binding, nuclear protein; 1.45A {Mus musculus} SCOP: a.4.1.3 PDB: 1gv5_A 1mbg_A 1mbh_A
Probab=72.61 E-value=4.9 Score=31.73 Aligned_cols=40 Identities=20% Similarity=0.316 Sum_probs=33.0
Q ss_pred CCCCcHHHHHHHHHhHhhcCC-chHHHHHhhhCCCCcHHHHHH
Q 002934 497 SSEWKPIEKELYLKGVEIFGR-NSCLIARNLLSGLKTCMEVST 538 (864)
Q Consensus 497 ~~~W~~~E~~l~~k~v~ifG~-N~C~iA~~ll~g~KTC~EV~~ 538 (864)
...||+-|-.++..+|..||. |.-.||..| +.+|=.++-.
T Consensus 3 k~~Wt~eED~~L~~~v~~~G~~~W~~Ia~~~--~~Rt~~qcr~ 43 (52)
T 1gvd_A 3 KGPWTKEEDQRLIKLVQKYGPKRWSVIAKHL--KGRIGKQCRE 43 (52)
T ss_dssp CCSCCHHHHHHHHHHHHHHCTTCHHHHHTTS--TTCCHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCcChHHHHHHHc--CCCCHHHHHH
Confidence 467999999999999999997 799999976 4566566544
No 77
>1x58_A Hypothetical protein 4930532D21RIK; MUS musculus adult MALE testis cDNA, riken FULL-length enriched library, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.4.1.1
Probab=70.67 E-value=3 Score=35.27 Aligned_cols=49 Identities=16% Similarity=0.265 Sum_probs=40.3
Q ss_pred ccccCCcccchhhhhHhhhcCChHHHHHHHH--HHh-cCCcHHHHHHHHHhHhh
Q 002934 173 EKHEFSDGEDRILWTVFEEHGLGEEVINAVS--QFI-GIATSEVQDRYSTLKEK 223 (864)
Q Consensus 173 ek~~f~~~ed~~~~~~~~e~g~sd~v~~~l~--~~~-~~~~sei~eRy~~L~~k 223 (864)
-++.|++.||..|.--.++||- .=-.|+. .|| ++|.-+|+.||+.|...
T Consensus 7 ~r~~WT~EE~~~L~~gV~k~G~--~W~~I~~~y~f~~~RT~VdLKdk~r~L~k~ 58 (62)
T 1x58_A 7 GRKDFTKEEVNYLFHGVKTMGN--HWNSILWSFPFQKGRRAVDLAHKYHRLISG 58 (62)
T ss_dssp CSSSCCHHHHHHHHHHHHHHCS--CHHHHHHHSCCCTTCCHHHHHHHHHHHHTC
T ss_pred CCCCCCHHHHHHHHHHHHHHhH--hHHHHHHhCCCccCcccchHHHHHHHHHhc
Confidence 3678999999999999999997 2333443 366 99999999999999885
No 78
>2dim_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=69.38 E-value=7.5 Score=32.58 Aligned_cols=40 Identities=23% Similarity=0.328 Sum_probs=33.7
Q ss_pred CCCCcHHHHHHHHHhHhhcC-CchHHHHHhhhCCCCcHHHHHH
Q 002934 497 SSEWKPIEKELYLKGVEIFG-RNSCLIARNLLSGLKTCMEVST 538 (864)
Q Consensus 497 ~~~W~~~E~~l~~k~v~ifG-~N~C~iA~~ll~g~KTC~EV~~ 538 (864)
...||+-|-.+++.+|..|| .|.-.||..| +.+|=.++-.
T Consensus 9 ~~~Wt~eED~~L~~~v~~~G~~~W~~Ia~~l--~~Rt~~qcr~ 49 (70)
T 2dim_A 9 GGVWRNTEDEILKAAVMKYGKNQWSRIASLL--HRKSAKQCKA 49 (70)
T ss_dssp TCCCCHHHHHHHHHHHHHTCSSCHHHHHHHS--TTCCHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCcCCHHHHHHHh--cCCCHHHHHH
Confidence 46799999999999999999 7999999986 5577666644
No 79
>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A*
Probab=69.15 E-value=2 Score=45.93 Aligned_cols=39 Identities=28% Similarity=0.736 Sum_probs=30.2
Q ss_pred CCcCCCCCCCCCC-CCcccCC-----------------------CccccCCCCCCcccccccc
Q 002934 615 QYTPCGCQSMCGK-QCPCLHN-----------------------GTCCEKYCGCSKSCKNRFR 653 (864)
Q Consensus 615 ~y~PC~c~~~C~~-~C~C~~~-----------------------g~~Ce~~CgC~~~C~nRf~ 653 (864)
.+..|+|.+.|.. .|+|.+. -..|...|+|+..|.||..
T Consensus 79 ~~~gC~C~~~C~~~~C~C~~~~~~~~y~~~g~l~~~~~~~~~~~i~EC~~~C~C~~~C~Nr~~ 141 (287)
T 3hna_A 79 HLQYCVCIDDCSSSNCMCGQLSMRCWYDKDGRLLPEFNMAEPPLIFECNHACSCWRNCRNRVV 141 (287)
T ss_dssp GCCCCCCSSSSCSTTCHHHHHTSSCCBCTTSCBCTTCCSSSCCCEECCCTTSSSCTTCSSCSG
T ss_pred CCCCCcCcCCCCCCCCcCcccCcccccCCCCcccccccccCCceEEecCCCCCCCCCCCCccc
Confidence 4678999999974 8999741 1468888888888888863
No 80
>1h89_C C-MYB, MYB proto-oncogene protein; transcription/DNA; 2.45A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 a.4.1.3 PDB: 1h88_C
Probab=68.12 E-value=3.3 Score=40.02 Aligned_cols=49 Identities=12% Similarity=0.248 Sum_probs=41.3
Q ss_pred cccccCCcccchhhhhHhhhcCChHHHHHHHHHHh-cCCcHHHHHHHHHhHh
Q 002934 172 EEKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLKE 222 (864)
Q Consensus 172 eek~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~-~~~~sei~eRy~~L~~ 222 (864)
-.|..|+..||.+|...+++||-.. -..||++| ++++.++++||..+-.
T Consensus 56 ~~~~~Wt~eEd~~L~~~v~~~g~~~--W~~Ia~~l~~Rt~~qcr~Rw~~~l~ 105 (159)
T 1h89_C 56 LIKGPWTKEEDQRVIKLVQKYGPKR--WSVIAKHLKGRIGKQCRERWHNHLN 105 (159)
T ss_dssp CCCSCCCHHHHHHHHHHHHHHCSCC--HHHHHHTSTTCCHHHHHHHHHHTTC
T ss_pred cCCCCCChHHHHHHHHHHHHhCccc--HHHHHHHcCCCCHHHHHHHHHHHhC
Confidence 3477899999999999999999632 56788888 9999999999987644
No 81
>2ltp_A Nuclear receptor corepressor 2; SMRT, TRAC, SGC, structural genomics consortium, NESG, north structural genomics consortium; NMR {Homo sapiens}
Probab=70.42 E-value=1.1 Score=39.75 Aligned_cols=42 Identities=31% Similarity=0.371 Sum_probs=35.6
Q ss_pred cCCCCcHHHHHHHHHhHhhcCCchHHHHHhhhCCCCcHHHHHHH
Q 002934 496 CSSEWKPIEKELYLKGVEIFGRNSCLIARNLLSGLKTCMEVSTY 539 (864)
Q Consensus 496 ~~~~W~~~E~~l~~k~v~ifG~N~C~iA~~ll~g~KTC~EV~~y 539 (864)
....||.-|..+++.++..||.++..||..| +.+|=.+|-.+
T Consensus 15 ~~~~WT~eEd~~l~~~~~~~G~~W~~IA~~l--~gRt~~q~k~r 56 (89)
T 2ltp_A 15 YFQGWTEEEMGTAKKGLLEHGRNWSAIARMV--GSKTVSQCKNF 56 (89)
Confidence 3568999999999999999999999999976 56777777543
No 82
>1w0t_A Telomeric repeat binding factor 1; telomere, DNA-binding protein, homeodomain, mitosis, cell cycle; 2.00A {Homo sapiens} SCOP: a.4.1.4 PDB: 1ba5_A
Probab=66.78 E-value=6 Score=31.42 Aligned_cols=29 Identities=24% Similarity=0.279 Sum_probs=26.6
Q ss_pred CCCcHHHHHHHHHhHhhcC-CchHHHHHhh
Q 002934 498 SEWKPIEKELYLKGVEIFG-RNSCLIARNL 526 (864)
Q Consensus 498 ~~W~~~E~~l~~k~v~ifG-~N~C~iA~~l 526 (864)
..||+-|-.++..+|..|| .|.-.||..+
T Consensus 3 ~~WT~eEd~~L~~~v~~~G~~~W~~Ia~~~ 32 (53)
T 1w0t_A 3 QAWLWEEDKNLRSGVRKYGEGNWSKILLHY 32 (53)
T ss_dssp CCCCHHHHHHHHHHHHHHCTTCHHHHHHHS
T ss_pred CCCCHHHHHHHHHHHHHHCcCCHHHHHHHc
Confidence 4699999999999999999 6999999976
No 83
>2llk_A Cyclin-D-binding MYB-like transcription factor 1; helix bundle, SGC, structural genomics consortium, NESG, NOR structural genomics consortium; NMR {Homo sapiens}
Probab=65.32 E-value=4.6 Score=34.89 Aligned_cols=40 Identities=18% Similarity=0.122 Sum_probs=32.8
Q ss_pred cCCCCcHHHHHHHHHhHhhcCCchHHHHHhhhCCCCcHHHHHH
Q 002934 496 CSSEWKPIEKELYLKGVEIFGRNSCLIARNLLSGLKTCMEVST 538 (864)
Q Consensus 496 ~~~~W~~~E~~l~~k~v~ifG~N~C~iA~~ll~g~KTC~EV~~ 538 (864)
....||+-|..+++.++..||.+...||+.| .+|=.+|-.
T Consensus 22 ~k~~wT~EED~~L~~l~~~~G~kW~~IA~~l---gRt~~q~kn 61 (73)
T 2llk_A 22 HVGKYTPEEIEKLKELRIKHGNDWATIGAAL---GRSASSVKD 61 (73)
T ss_dssp CCCSSCHHHHHHHHHHHHHHSSCHHHHHHHH---TSCHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHh---CCCHHHHHH
Confidence 4578999999999999999999999999987 355445433
No 84
>2eqr_A N-COR1, N-COR, nuclear receptor corepressor 1; SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=64.97 E-value=5.1 Score=33.04 Aligned_cols=48 Identities=15% Similarity=0.207 Sum_probs=40.6
Q ss_pred cccccCCcccchhhhhHhhhcCChHHHHHHHHHHh-cCCcHHHHHHHHHhHh
Q 002934 172 EEKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLKE 222 (864)
Q Consensus 172 eek~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~-~~~~sei~eRy~~L~~ 222 (864)
.....|++.|+.++...+..||- -+..||++| ++++.++.++|-.-++
T Consensus 10 ~~~~~WT~eE~~~F~~~~~~~gk---~w~~Ia~~l~~rt~~~~v~~Yy~~Kk 58 (61)
T 2eqr_A 10 QFMNVWTDHEKEIFKDKFIQHPK---NFGLIASYLERKSVPDCVLYYYLTKK 58 (61)
T ss_dssp SCCCSCCHHHHHHHHHHHHHSTT---CHHHHHHHCTTSCHHHHHHHHHHHTC
T ss_pred ccCCCCCHHHHHHHHHHHHHhCC---CHHHHHHHcCCCCHHHHHHHHHHhcC
Confidence 35578999999999999999994 388999999 7899999999865443
No 85
>3sjm_A Telomeric repeat-binding factor 2; human telomeric repeat binding protein 2, telomere, telomeri homeodomain proteins amino acid sequence; HET: DNA; 1.35A {Homo sapiens} PDB: 1xg1_A 1vfc_A 1vf9_A 1w0u_A
Probab=64.89 E-value=9.8 Score=31.78 Aligned_cols=45 Identities=24% Similarity=0.305 Sum_probs=33.7
Q ss_pred CCCCcHHHHHHHHHhHhhcCC-chHHHHHhhhCCCCc---HHHHHHHHh
Q 002934 497 SSEWKPIEKELYLKGVEIFGR-NSCLIARNLLSGLKT---CMEVSTYMR 541 (864)
Q Consensus 497 ~~~W~~~E~~l~~k~v~ifG~-N~C~iA~~ll~g~KT---C~EV~~ym~ 541 (864)
...||+-|-.++..+|..||. +.-.||..+....+| |.+=|.-|.
T Consensus 11 k~~WT~eED~~L~~~V~~~G~~~W~~Ia~~~~~~~Rt~~qcr~Rw~nl~ 59 (64)
T 3sjm_A 11 KQKWTVEESEWVKAGVQKYGEGNWAAISKNYPFVNRTAVMIKDRWRTMK 59 (64)
T ss_dssp CCCCCHHHHHHHHHHHHHHCTTCHHHHHHHSCCSSCCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHccCCCchHHHHhhcCCCCCCHHHHHHHHHHHh
Confidence 467999999999999999995 899999875212355 555555443
No 86
>1ity_A TRF1; helix-turn-helix, telomeres, DNA binding, MYB domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: a.4.1.4 PDB: 1iv6_A
Probab=64.82 E-value=6.5 Score=32.95 Aligned_cols=45 Identities=20% Similarity=0.157 Sum_probs=33.4
Q ss_pred CCCCcHHHHHHHHHhHhhcC-CchHHHHHhhhCCCCc---HHHHHHHHh
Q 002934 497 SSEWKPIEKELYLKGVEIFG-RNSCLIARNLLSGLKT---CMEVSTYMR 541 (864)
Q Consensus 497 ~~~W~~~E~~l~~k~v~ifG-~N~C~iA~~ll~g~KT---C~EV~~ym~ 541 (864)
...||+-|-.+++.+|..|| .+.-.||..|-...+| |.+=|..+.
T Consensus 10 r~~WT~eED~~L~~~v~~~G~~~W~~Ia~~~~~~~Rt~~qcr~Rw~~~l 58 (69)
T 1ity_A 10 RQAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRWRTMK 58 (69)
T ss_dssp CCCCCHHHHHHHHHHHHHHCSSCHHHHHHHSCCSSCCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCCCcHHHHHHHcCcCCCCHHHHHHHHHHHc
Confidence 46799999999999999999 6999999976200455 444444443
No 87
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=63.72 E-value=4.9 Score=44.92 Aligned_cols=31 Identities=16% Similarity=-0.032 Sum_probs=28.0
Q ss_pred cCcEEEEecCCCCceeeeccccCCCCeeeEe
Q 002934 714 QQRILLAKSDVAGWGAFLKNSVSKNDYLGEY 744 (864)
Q Consensus 714 ~~~l~V~kS~~kG~GLfA~edI~KGefI~EY 744 (864)
...|+++.++.+|.||+|+++|++|+.|..-
T Consensus 6 ~~~ve~~~~~~~GRgl~A~r~i~~Ge~Il~e 36 (433)
T 3qww_A 6 RGGLERFCSAGKGRGLRALRPFHVGDLLFSC 36 (433)
T ss_dssp STTEEEEECTTSCEEEEESSCBCTTCEEEEE
T ss_pred CCcEEEeecCCCcCeEEECCCCCCCCEEEec
Confidence 3679999999999999999999999998754
No 88
>2din_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=63.54 E-value=8.7 Score=31.83 Aligned_cols=39 Identities=23% Similarity=0.341 Sum_probs=32.3
Q ss_pred cCCCCcHHHHHHHHHhHhhcCCchHHHHHhhhCCCCcHHHHH
Q 002934 496 CSSEWKPIEKELYLKGVEIFGRNSCLIARNLLSGLKTCMEVS 537 (864)
Q Consensus 496 ~~~~W~~~E~~l~~k~v~ifG~N~C~iA~~ll~g~KTC~EV~ 537 (864)
....||.-|..+++.++..||.+.-.||. |. | +|=.+|-
T Consensus 8 ~k~~WT~eED~~L~~~~~~~g~~W~~Ia~-~~-g-Rt~~qcr 46 (66)
T 2din_A 8 KKTEWSREEEEKLLHLAKLMPTQWRTIAP-II-G-RTAAQCL 46 (66)
T ss_dssp SCCCCCHHHHHHHHHHHHHCTTCHHHHHH-HH-S-SCHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCHHHHhc-cc-C-cCHHHHH
Confidence 35689999999999999999999999999 43 4 6655553
No 89
>2ckx_A NGTRF1, telomere binding protein TBP1; nuclear protein; 1.9A {Nicotiana tabacum} SCOP: a.4.1.3 PDB: 2qhb_A
Probab=61.89 E-value=5 Score=35.50 Aligned_cols=46 Identities=24% Similarity=0.247 Sum_probs=36.6
Q ss_pred cCCcccchhhhhHhhhcCChHHHHHHHHH-----HhcCCcHHHHHHHHHhHhh
Q 002934 176 EFSDGEDRILWTVFEEHGLGEEVINAVSQ-----FIGIATSEVQDRYSTLKEK 223 (864)
Q Consensus 176 ~f~~~ed~~~~~~~~e~g~sd~v~~~l~~-----~~~~~~sei~eRy~~L~~k 223 (864)
-|+..||.+|...++.||... -..|++ |-++|.-+|+.||.+|...
T Consensus 2 ~WT~eEd~~L~~gv~k~G~g~--W~~I~~~~~~~~~~RT~~~lKdrWrnllk~ 52 (83)
T 2ckx_A 2 PFSVAEVEALVEAVEHLGTGR--WRDVKMRAFDNADHRTYVDLKDKWKTLVHT 52 (83)
T ss_dssp CCCHHHHHHHHHHHHHHCSSC--HHHHHHHHCTTCTTSCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCC--cHHHHHhhccccCCCCHHHHHHHHHHHHHh
Confidence 589999999999999999732 223333 3499999999999999864
No 90
>2y9y_A Imitation switch protein 1 (DEL_ATPase); transcription, nuclear protein complex, chromatin remodeling nucleosome remodeling; 3.25A {Saccharomyces cerevisiae} PDB: 2y9z_A
Probab=60.30 E-value=6.2 Score=43.83 Aligned_cols=48 Identities=27% Similarity=0.346 Sum_probs=39.9
Q ss_pred cccCCcccchhhhhHhhhcCC-----hHHHHHHHHHH--------h-cCCcHHHHHHHHHhH
Q 002934 174 KHEFSDGEDRILWTVFEEHGL-----GEEVINAVSQF--------I-GIATSEVQDRYSTLK 221 (864)
Q Consensus 174 k~~f~~~ed~~~~~~~~e~g~-----sd~v~~~l~~~--------~-~~~~sei~eRy~~L~ 221 (864)
++.|++.||++|=..+-.||+ =++|-..|... | ++|+.||+.|.+.|-
T Consensus 228 ~k~yteeEDRfLL~~l~k~G~~~~g~we~Ir~~Ir~~p~FrFDwF~kSRT~~EL~rRc~tLi 289 (374)
T 2y9y_A 228 KRTYSEEEDRFILLMLFKYGLDRDDVYELVRDEIRDCPLFELDFYFRSRTPVELARRGNTLL 289 (374)
T ss_dssp CCCSCHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHCSGGGSCHHHHTCCHHHHHHHHHHHH
T ss_pred CCccCHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCcchhhhHHHhcCCHHHHHHHHHHHH
Confidence 578999999998888888988 67776555543 3 899999999999985
No 91
>2aje_A Telomere repeat-binding protein; DNA-binding, Trp, MYB motif, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: a.4.1.3
Probab=59.99 E-value=9.1 Score=35.31 Aligned_cols=49 Identities=22% Similarity=0.239 Sum_probs=39.1
Q ss_pred ccccCCcccchhhhhHhhhcCChHHHHHHHHH-H----hcCCcHHHHHHHHHhHhh
Q 002934 173 EKHEFSDGEDRILWTVFEEHGLGEEVINAVSQ-F----IGIATSEVQDRYSTLKEK 223 (864)
Q Consensus 173 ek~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~-~----~~~~~sei~eRy~~L~~k 223 (864)
-+.-||..||.+|...++.||-.. -..|+. + -++|.-+|+.||..|...
T Consensus 12 ~r~~WT~EEd~~L~~gV~k~G~g~--W~~I~~~~~~~f~~RT~v~lKdrWrnllk~ 65 (105)
T 2aje_A 12 IRRPFSVAEVEALVQAVEKLGTGR--WRDVKLCAFEDADHRTYVDLKDKWKTLVHT 65 (105)
T ss_dssp CCCSCCHHHHHHHHHHHHHHCSSS--HHHHHSSSSSSTTCCCHHHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHHhCCCC--hHHHHHHhccccCCCCHHHHHHHHHHHHhh
Confidence 467899999999999999999732 223333 2 389999999999999874
No 92
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=59.50 E-value=6.7 Score=44.58 Aligned_cols=31 Identities=13% Similarity=0.042 Sum_probs=28.2
Q ss_pred cCcEEEEecCCCCceeeeccccCCCCeeeEe
Q 002934 714 QQRILLAKSDVAGWGAFLKNSVSKNDYLGEY 744 (864)
Q Consensus 714 ~~~l~V~kS~~kG~GLfA~edI~KGefI~EY 744 (864)
...|+|..++.+|.||+|+++|++|+.|..-
T Consensus 6 ~~~v~v~~~~~~GR~lvAtr~i~~Ge~Il~e 36 (490)
T 3n71_A 6 MENVEVFTSEGKGRGLKATKEFWAADVIFAE 36 (490)
T ss_dssp CTTEEEEECSSSCEEEEESSCBCTTCEEEEE
T ss_pred CCceEEEecCCCCceEEeccCCCCCCEEEec
Confidence 4679999999999999999999999999753
No 93
>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens}
Probab=58.80 E-value=5.9 Score=42.25 Aligned_cols=21 Identities=33% Similarity=0.975 Sum_probs=15.6
Q ss_pred CCcCCCCC-CCCC-CCCcccCCC
Q 002934 615 QYTPCGCQ-SMCG-KQCPCLHNG 635 (864)
Q Consensus 615 ~y~PC~c~-~~C~-~~C~C~~~g 635 (864)
.+..|+|. +.|. ..|+|...+
T Consensus 58 ~~~gC~C~~~~C~~~~C~C~~~~ 80 (290)
T 3bo5_A 58 TFPGCICVKTPCLPGTCSCLRHG 80 (290)
T ss_dssp CCCCCCCCSSCCCTTTCGGGTTS
T ss_pred cCCCCCCCCCCcCCCCCcchhhc
Confidence 35679997 4787 579998754
No 94
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=58.00 E-value=7.3 Score=43.29 Aligned_cols=30 Identities=10% Similarity=0.017 Sum_probs=27.2
Q ss_pred cCcEEEEecCCCCceeeeccccCCCCeeeE
Q 002934 714 QQRILLAKSDVAGWGAFLKNSVSKNDYLGE 743 (864)
Q Consensus 714 ~~~l~V~kS~~kG~GLfA~edI~KGefI~E 743 (864)
...|+++.++.+|.||+|+++|++|+.|..
T Consensus 4 ~~~i~~~~~~~~GR~l~Atr~i~~Ge~Il~ 33 (429)
T 3qwp_A 4 PLKVEKFATANRGNGLRAVTPLRPGELLFR 33 (429)
T ss_dssp CCSEEEEECSSSSEEEEESSCBCTTCEEEE
T ss_pred ccceeecccCCCCCeEEeCCCCCCCCEEEe
Confidence 457888899999999999999999999876
No 95
>2juh_A Telomere binding protein TBP1; helix, nucleus, nuclear protein; NMR {Nicotiana glutinosa}
Probab=55.99 E-value=8 Score=36.60 Aligned_cols=50 Identities=22% Similarity=0.228 Sum_probs=39.7
Q ss_pred cccccCCcccchhhhhHhhhcCChHHHHHHHHHH-----hcCCcHHHHHHHHHhHhh
Q 002934 172 EEKHEFSDGEDRILWTVFEEHGLGEEVINAVSQF-----IGIATSEVQDRYSTLKEK 223 (864)
Q Consensus 172 eek~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~-----~~~~~sei~eRy~~L~~k 223 (864)
--+.-|+..||.+|...+++||-.. -..|+.+ -++|.-+|+.||..|...
T Consensus 15 r~r~~WT~EEd~~L~~gV~k~G~G~--W~~Ia~~~~~~f~~RT~v~lKdRWrnllk~ 69 (121)
T 2juh_A 15 RIRRPFSVAEVEALVEAVEHLGTGR--WRDVKMRAFDNADHRTYVDLKDKWKTLVHT 69 (121)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHGGGC--HHHHHHHHCSCCSSCCSHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHCCCC--HHHHHHHhccccCCCCHHHHHHHHHHHHhh
Confidence 4567899999999999999999621 3334443 399999999999999863
No 96
>2xus_A Breast cancer metastasis-suppressor 1; protein binding; 1.912A {Homo sapiens}
Probab=55.25 E-value=8.4 Score=31.15 Aligned_cols=31 Identities=19% Similarity=0.397 Sum_probs=28.1
Q ss_pred CcccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 002934 22 DGLGNLTYKLNQLKKQVQAERVVSVKDKIEK 52 (864)
Q Consensus 22 ~~~~~L~~~i~~LKkqi~~eR~~~ik~k~e~ 52 (864)
+.+..|...+..||.|+=.||+..|+.++++
T Consensus 13 d~l~~LEkqF~~LkEqlY~ERl~ql~~~Lee 43 (49)
T 2xus_A 13 SEMLDLEKQFSELKEKLFRERLSQLRLRLEE 43 (49)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4677888999999999999999999999886
No 97
>2cjj_A Radialis; plant development, DNA-binding protein, MYB transcription FA DNA-binding, nuclear protein, floral asymmetry; 1.9A {Antirrhinum majus} SCOP: a.4.1.3
Probab=53.80 E-value=18 Score=32.60 Aligned_cols=42 Identities=17% Similarity=0.301 Sum_probs=34.3
Q ss_pred CCCCcHHHHHHHHHhHhhcC----CchHHHHHhhhCCCCcHHHHHHHH
Q 002934 497 SSEWKPIEKELYLKGVEIFG----RNSCLIARNLLSGLKTCMEVSTYM 540 (864)
Q Consensus 497 ~~~W~~~E~~l~~k~v~ifG----~N~C~iA~~ll~g~KTC~EV~~ym 540 (864)
...||.-|..+|+.++..|| ...=.||..| +.||=.||-.+.
T Consensus 8 ~~~WT~eEd~~L~~al~~~~~~~~~rW~~IA~~v--pGRT~~q~k~ry 53 (93)
T 2cjj_A 8 GRPWSAKENKAFERALAVYDKDTPDRWANVARAV--EGRTPEEVKKHY 53 (93)
T ss_dssp CCSCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHS--TTCCHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCCCchHHHHHHHc--CCCCHHHHHHHH
Confidence 46799999999999999996 5688999876 558877775543
No 98
>2roh_A RTBP1, telomere binding protein-1; plant, nucleus, DNA binding protein; NMR {Oryza sativa}
Probab=52.77 E-value=9.3 Score=36.20 Aligned_cols=51 Identities=20% Similarity=0.257 Sum_probs=38.8
Q ss_pred ccccCCcccchhhhhHhhhcCCh--HHHHHHHH-HHhcCCcHHHHHHHHHhHhh
Q 002934 173 EKHEFSDGEDRILWTVFEEHGLG--EEVINAVS-QFIGIATSEVQDRYSTLKEK 223 (864)
Q Consensus 173 ek~~f~~~ed~~~~~~~~e~g~s--d~v~~~l~-~~~~~~~sei~eRy~~L~~k 223 (864)
-+.-|+..||.+|...+++||-. -.|+..+- .|-++|.-+|+.||.+|...
T Consensus 30 ~r~~WT~EEd~~L~~gV~k~G~g~W~~I~~~~~~~~~~RT~vdlKdRWrnllk~ 83 (122)
T 2roh_A 30 IRRPFTVAEVELLVEAVEHLGTGRWRDVKFRAFENVHHRTYVDLKDKWKTLVHT 83 (122)
T ss_dssp CCCCCCHHHHHHHHHHHHHHSSSCHHHHHHHHHSSSCCCCHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCChHHHHHHhccccCCCCHHHHHHHHHHHHhh
Confidence 46789999999999999999972 12222211 12399999999999999854
No 99
>1ofc_X ISWI protein; nuclear protein, chromatin remodeling factor, ATPase, SANT domain, nucleosome recognition; HET: GLC G4D; 1.9A {Drosophila melanogaster} SCOP: a.4.1.3 a.4.1.13 a.187.1.1 PDB: 2nog_A
Probab=52.64 E-value=11 Score=40.69 Aligned_cols=49 Identities=29% Similarity=0.448 Sum_probs=38.0
Q ss_pred ccccCCcccchhhhhHhhhcCCh-HHHHHHHH------------HHh-cCCcHHHHHHHHHhH
Q 002934 173 EKHEFSDGEDRILWTVFEEHGLG-EEVINAVS------------QFI-GIATSEVQDRYSTLK 221 (864)
Q Consensus 173 ek~~f~~~ed~~~~~~~~e~g~s-d~v~~~l~------------~~~-~~~~sei~eRy~~L~ 221 (864)
-++.|++.||++|=..+..||+. +.+.+.|. =|| ++||.||+.|...|-
T Consensus 211 k~k~yteeEDRfLL~~l~k~G~~~~g~we~Ir~~Ir~~p~FrFDwf~kSRTp~el~rRc~tLi 273 (304)
T 1ofc_X 211 KGKNYTEIEDRFLVCMLHKLGFDKENVYEELRAAIRASPQFRFDWFIKSRTALELQRRCNTLI 273 (304)
T ss_dssp CCSSCCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHCGGGTTCHHHHTCCHHHHHHHHHHHH
T ss_pred CCCccCHHHHHHHHHHHHHhcCCCcchHHHHHHHHHhCcchhhhHHHhcCCHHHHHHHHHHHH
Confidence 45789999999988889999992 23444443 134 899999999998884
No 100
>2l9z_A PR domain zinc finger protein 4; zinc-binding domain, transcription; NMR {Homo sapiens}
Probab=52.62 E-value=5.4 Score=30.76 Aligned_cols=21 Identities=29% Similarity=0.724 Sum_probs=18.1
Q ss_pred hhccccccccccccc---ccCCcC
Q 002934 251 LDSFDNLFCRRCLLF---DCRLHG 271 (864)
Q Consensus 251 ldsFdnlFCRRClvf---DC~lHg 271 (864)
++..+.|||--|--| +|+.||
T Consensus 6 ~~~~~yl~CE~C~~~~~~~Cp~HG 29 (39)
T 2l9z_A 6 MATLFTIWCTLCDRAYPSDCPEHG 29 (39)
T ss_dssp SCCSCSEEEGGGTEEESSSBTTTB
T ss_pred chhhhhhHHHHHhhhchhhchhcC
Confidence 456789999999877 899999
No 101
>3hm5_A DNA methyltransferase 1-associated protein 1; DNA methylation, chromatin, structural genomics consortium, SGC, activator, chromatin regulator; HET: DNA; 1.80A {Homo sapiens}
Probab=51.39 E-value=13 Score=33.70 Aligned_cols=46 Identities=13% Similarity=0.268 Sum_probs=38.8
Q ss_pred ccCCcccchhhhhHhhhcCChHHHHHHHHHHh------cCCcHHHHHHHHHhHhh
Q 002934 175 HEFSDGEDRILWTVFEEHGLGEEVINAVSQFI------GIATSEVQDRYSTLKEK 223 (864)
Q Consensus 175 ~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~------~~~~sei~eRy~~L~~k 223 (864)
..++..|+..|--..+++||- +-+|+..+ ++|.++||+||-.+..+
T Consensus 31 ~~WTkEETd~Lf~L~~~fdlR---W~vI~DRy~~~~~~~Rt~EdLK~RyY~v~~~ 82 (93)
T 3hm5_A 31 DAWTKAETDHLFDLSRRFDLR---FVVIHDRYDHQQFKKRSVEDLKERYYHICAK 82 (93)
T ss_dssp TTBCHHHHHHHHHHHHHTTTC---HHHHHHHSCTTTSCCCCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCC---eeeehhhhccCCCCCCCHHHHHHHHHHHHHH
Confidence 468999999999999999996 55677777 69999999999777654
No 102
>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens}
Probab=51.33 E-value=6.5 Score=40.15 Aligned_cols=42 Identities=21% Similarity=0.419 Sum_probs=30.7
Q ss_pred CCcCCcCCCC-CCCCCCCCcccCCCccccC-CCCCCcccccccc
Q 002934 612 SCKQYTPCGC-QSMCGKQCPCLHNGTCCEK-YCGCSKSCKNRFR 653 (864)
Q Consensus 612 ~~~~y~PC~c-~~~C~~~C~C~~~g~~Ce~-~CgC~~~C~nRf~ 653 (864)
.|.-..|++- ...|+++|.+......|.. .|+|+..|.||..
T Consensus 24 ~C~C~~~~~~~~~~c~~~C~nr~~~~EC~~~~C~C~~~C~Nr~~ 67 (222)
T 3ope_A 24 TCNCKKPDDDTRKGCVDDCLNRMIFAECSPNTCPCGEQCCNQRI 67 (222)
T ss_dssp CCCCCCCSCSSSCSSCSCCTTGGGTBCCCTTTCTTTTSCSSCTT
T ss_pred cccCcCCCcCCCCCCcccCcCcCeEeEeCCCCCcCCCCCCCceE
Confidence 3443444332 1356789999999999997 8999999999853
No 103
>2xag_B REST corepressor 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_B* 2xah_B* 2xaj_B* 2xaq_B* 2xas_B*
Probab=50.01 E-value=3.4 Score=47.29 Aligned_cols=43 Identities=19% Similarity=0.311 Sum_probs=0.0
Q ss_pred CCCCcHHHHHHHHHhHhhcCCchHHHHHhhhCCCCcHHHHHHHHh
Q 002934 497 SSEWKPIEKELYLKGVEIFGRNSCLIARNLLSGLKTCMEVSTYMR 541 (864)
Q Consensus 497 ~~~W~~~E~~l~~k~v~ifG~N~C~iA~~ll~g~KTC~EV~~ym~ 541 (864)
...||..|+.+|..++.+||+|+-.|+..| ..||-.++-.|..
T Consensus 189 ~d~WT~eE~~lFe~al~~yGKdF~~I~~~l--p~Ksv~e~V~yYY 231 (482)
T 2xag_B 189 PDEWTVEDKVLFEQAFSFHGKTFHRIQQML--PDKSIASLVKFYY 231 (482)
T ss_dssp ---------------------------------------------
T ss_pred ccccCHHHHHHHHHHHHHcCccHHHHHHHc--CCCCHHHHHHHhc
Confidence 358999999999999999999999999865 7899999987665
No 104
>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A*
Probab=48.01 E-value=7.2 Score=41.66 Aligned_cols=19 Identities=37% Similarity=0.985 Sum_probs=13.9
Q ss_pred CcCCCCCC--CCC-CCCcccCC
Q 002934 616 YTPCGCQS--MCG-KQCPCLHN 634 (864)
Q Consensus 616 y~PC~c~~--~C~-~~C~C~~~ 634 (864)
...|+|.+ .|. ..|.|...
T Consensus 47 ~~gC~C~~~~~C~~~~C~C~~~ 68 (302)
T 1ml9_A 47 RVGCSCASDEECMYSTCQCLDE 68 (302)
T ss_dssp CCCCCCSSTTGGGSTTSGGGTT
T ss_pred CCCccCcCCCCcCCCCCcChhh
Confidence 35699986 786 57999763
No 105
>2lua_A Protein MALE-specific lethal-2; DNA binding protein, metal binding; NMR {Drosophila melanogaster}
Probab=41.88 E-value=13 Score=30.38 Aligned_cols=19 Identities=32% Similarity=1.093 Sum_probs=16.2
Q ss_pred CCccCCCcccccccCccCc
Q 002934 660 SQCRSRQCPCFAAGRECDP 678 (864)
Q Consensus 660 ~~C~t~~CpC~~a~rECdP 678 (864)
..|+...||||..+.-|..
T Consensus 19 ~TC~~~RCpCY~~~~sC~~ 37 (52)
T 2lua_A 19 TTCRNSRCPCYKSYNSCAG 37 (52)
T ss_dssp STTTSTTCHHHHTTCCCSS
T ss_pred eeEcCCccceecCCCccCC
Confidence 3799999999999988864
No 106
>3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens}
Probab=37.44 E-value=21 Score=40.67 Aligned_cols=32 Identities=6% Similarity=0.083 Sum_probs=27.4
Q ss_pred cEEEEecCCCCceeeeccccCCCCeeeEeccc
Q 002934 716 RILLAKSDVAGWGAFLKNSVSKNDYLGEYTGE 747 (864)
Q Consensus 716 ~l~V~kS~~kG~GLfA~edI~KGefI~EY~GE 747 (864)
.|.|...+..|+||+|+++|++|+.|...--.
T Consensus 94 ~v~i~~~~~~GrGl~A~~dI~~ge~ll~IP~~ 125 (497)
T 3smt_A 94 GFEMVNFKEEGFGLRATRDIKAEELFLWVPRK 125 (497)
T ss_dssp TEEEEEETTTEEEEEESSCBCTTCEEEEEEGG
T ss_pred ceEEEEcCCCccEEEEcccCCCCCEEEEcCHH
Confidence 57888888999999999999999998875444
No 107
>1wgx_A KIAA1903 protein; MYB DNA-binding domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=36.82 E-value=55 Score=28.35 Aligned_cols=44 Identities=14% Similarity=0.104 Sum_probs=35.5
Q ss_pred cCCCCcHHHHHHHHHhHhhcCC----chHHHHHhhhCCCCcHHHHHHHHh
Q 002934 496 CSSEWKPIEKELYLKGVEIFGR----NSCLIARNLLSGLKTCMEVSTYMR 541 (864)
Q Consensus 496 ~~~~W~~~E~~l~~k~v~ifG~----N~C~iA~~ll~g~KTC~EV~~ym~ 541 (864)
....||.-|..+|+.++.+|+. +.=.||..+ |.||=.||-..-.
T Consensus 7 ~~~~WT~eE~k~fe~ALa~~~~~tp~rWe~IA~~V--~gKT~eE~~~hY~ 54 (73)
T 1wgx_A 7 GDKEWNEKELQKLHCAFASLPKHKPGFWSEVAAAV--GSRSPEECQRKYM 54 (73)
T ss_dssp SSSCCCHHHHHHHHHHHHHSCSSSSSHHHHHHHHT--TTSCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCCccHHHHHHHHc--CCCCHHHHHHHHH
Confidence 3568999999999999999985 466788866 6699888876443
No 108
>1rju_V Metallothionein; Cu(I)-thiolate, metal binding protein; 1.44A {Synthetic} SCOP: g.46.1.1 PDB: 1aoo_A 1aqq_A 1aqr_A 1fmy_A
Probab=36.36 E-value=26 Score=25.77 Aligned_cols=12 Identities=42% Similarity=1.329 Sum_probs=5.6
Q ss_pred cccCCCCCCccc
Q 002934 637 CCEKYCGCSKSC 648 (864)
Q Consensus 637 ~Ce~~CgC~~~C 648 (864)
-|.+.|.|+..|
T Consensus 15 qcqkscscptgc 26 (36)
T 1rju_V 15 QCQKSCSCPTGC 26 (36)
T ss_dssp GGTTSCCSCTTC
T ss_pred HHhhcCCCCCCC
Confidence 345555554333
No 109
>1x58_A Hypothetical protein 4930532D21RIK; MUS musculus adult MALE testis cDNA, riken FULL-length enriched library, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.4.1.1
Probab=35.16 E-value=29 Score=29.30 Aligned_cols=28 Identities=18% Similarity=0.272 Sum_probs=25.7
Q ss_pred CCCCcHHHHHHHHHhHhhcCCchHHHHH
Q 002934 497 SSEWKPIEKELYLKGVEIFGRNSCLIAR 524 (864)
Q Consensus 497 ~~~W~~~E~~l~~k~v~ifG~N~C~iA~ 524 (864)
...||.-|...++.||+-||.+.-.|+.
T Consensus 8 r~~WT~EE~~~L~~gV~k~G~~W~~I~~ 35 (62)
T 1x58_A 8 RKDFTKEEVNYLFHGVKTMGNHWNSILW 35 (62)
T ss_dssp SSSCCHHHHHHHHHHHHHHCSCHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHhHhHHHHHH
Confidence 5689999999999999999999888885
No 110
>2iw5_B Protein corest, REST corepressor 1; oxidoreductase-transcription regulator complex, oxidoreductase/repressor complex, histone demethylase, FAD; HET: FAD; 2.57A {Homo sapiens} SCOP: a.4.1.3 PDB: 2uxn_B* 2uxx_B* 2y48_B* 2v1d_B* 2x0l_B*
Probab=34.67 E-value=26 Score=36.52 Aligned_cols=47 Identities=13% Similarity=0.284 Sum_probs=41.0
Q ss_pred cccCCcccchhhhhHhhhcCChHHHHHHHHHHh-cCCcHHHHHHHHHhHhh
Q 002934 174 KHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLKEK 223 (864)
Q Consensus 174 k~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~-~~~~sei~eRy~~L~~k 223 (864)
..-|++.|+.++-.+++.||-. +..||++| +.|..+|+..|..-+++
T Consensus 133 s~~WTeEE~~lFleAl~kYGKD---W~~IAk~VgTKT~~QcKnfY~~~kKR 180 (235)
T 2iw5_B 133 NARWTTEEQLLAVQAIRKYGRD---FQAISDVIGNKSVVQVKNFFVNYRRR 180 (235)
T ss_dssp CSSCCHHHHHHHHHHHHHHSSC---HHHHHHHHSSCCHHHHHHHHHHTTTT
T ss_pred CCCCCHHHHHHHHHHHHHHCcC---HHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 4569999999999999999976 99999999 78889999999766553
No 111
>1fex_A TRF2-interacting telomeric RAP1 protein; helix turn helix, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Synthetic} SCOP: a.4.1.3
Probab=32.90 E-value=32 Score=28.30 Aligned_cols=45 Identities=22% Similarity=0.392 Sum_probs=36.8
Q ss_pred ccCCcccchhhhhHhhhcCC------hHHHHHHHHH--HhcCCcHHHHHHHHH
Q 002934 175 HEFSDGEDRILWTVFEEHGL------GEEVINAVSQ--FIGIATSEVQDRYST 219 (864)
Q Consensus 175 ~~f~~~ed~~~~~~~~e~g~------sd~v~~~l~~--~~~~~~sei~eRy~~ 219 (864)
-.|++.||.+|...+.++.. ...+...|++ +-..|-.-..+||..
T Consensus 3 ~~FT~edD~~L~~~v~~~~~~~~~~~Gn~iwk~la~~~~~~HtwqSwRdRy~k 55 (59)
T 1fex_A 3 IAFTDADDVAILTYVKENARSPSSVTGNALWKAMEKSSLTQHSWQSLKDRYLK 55 (59)
T ss_dssp CCCCHHHHHHHHHHHHHTCCSTTTTTSSHHHHHHHHSCSSSCCSHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhccccCCCccHHHHHHHHHhHCCCCCHHHHHHHHHH
Confidence 46999999999999999943 4577788887 448888999999954
No 112
>2cqq_A RSGI RUH-037, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=32.71 E-value=88 Score=26.73 Aligned_cols=42 Identities=21% Similarity=0.344 Sum_probs=34.2
Q ss_pred CCCCcHHHHHHHHHhHhhcC----CchHHHHHhhhCCCCcHHHHHHHHh
Q 002934 497 SSEWKPIEKELYLKGVEIFG----RNSCLIARNLLSGLKTCMEVSTYMR 541 (864)
Q Consensus 497 ~~~W~~~E~~l~~k~v~ifG----~N~C~iA~~ll~g~KTC~EV~~ym~ 541 (864)
...||.-|..+|.+++..|+ ...=.||..| | ||=.||-.+..
T Consensus 8 ~~~WT~eE~k~fe~al~~~p~~t~~RW~~IA~~l--g-Rt~~eV~~~y~ 53 (72)
T 2cqq_A 8 APEWTEEDLSQLTRSMVKFPGGTPGRWEKIAHEL--G-RSVTDVTTKAK 53 (72)
T ss_dssp CCCCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHH--T-SCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHCCCCCCcHHHHHHHHh--C-CCHHHHHHHHH
Confidence 46799999999999999997 3577899886 4 88888866544
No 113
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=31.77 E-value=44 Score=26.09 Aligned_cols=34 Identities=32% Similarity=0.595 Sum_probs=25.2
Q ss_pred ccceeeEeCCCCeEEEecCC----ccccCCCccccccCC
Q 002934 144 GRRRIYYDQHGSEALVCSDS----EEDIIEPEEEKHEFS 178 (864)
Q Consensus 144 grrriYYD~~g~EalicSds----eee~~e~eeek~~f~ 178 (864)
|...|-||...|| |||..- +|++++...|=+-|+
T Consensus 12 ~~~~l~~d~~~ge-lvC~~CG~v~~e~~id~~~ewr~f~ 49 (50)
T 1pft_A 12 ESAELIYDPERGE-IVCAKCGYVIEENIIDMGPEWRAFD 49 (50)
T ss_dssp SCCCEEEETTTTE-EEESSSCCBCCCCCCCCCSSSSCCC
T ss_pred CCcceEEcCCCCe-EECcccCCcccccccccCCcccccC
Confidence 3347899999999 999886 455666666677775
No 114
>3zqc_A MYB3; transcription-DNA complex, DNA-binding protein, nucleus; 2.90A {Trichomonas vaginalis}
Probab=31.48 E-value=46 Score=31.01 Aligned_cols=42 Identities=19% Similarity=0.282 Sum_probs=34.6
Q ss_pred CCCCcHHHHHHHHHhHhhcCCchHHHHHhhhCCCCcHHHHHHHH
Q 002934 497 SSEWKPIEKELYLKGVEIFGRNSCLIARNLLSGLKTCMEVSTYM 540 (864)
Q Consensus 497 ~~~W~~~E~~l~~k~v~ifG~N~C~iA~~ll~g~KTC~EV~~ym 540 (864)
...||+-|..+++.+|..||.+.-.||..| +.+|=.+|-.+-
T Consensus 54 ~~~Wt~eEd~~L~~~~~~~G~~W~~Ia~~l--~gRt~~~~k~rw 95 (131)
T 3zqc_A 54 KHAWTPEEDETIFRNYLKLGSKWSVIAKLI--PGRTDNAIKNRW 95 (131)
T ss_dssp CSCCCHHHHHHHHHHHHHSCSCHHHHTTTS--TTCCHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCcCHHHHHHHc--CCCCHHHHHHHH
Confidence 457999999999999999999999999865 557766665543
No 115
>3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A*
Probab=31.16 E-value=36 Score=38.20 Aligned_cols=34 Identities=21% Similarity=0.367 Sum_probs=27.0
Q ss_pred CcEEEEec-CCCCceeeeccccCCCCeeeEecccc
Q 002934 715 QRILLAKS-DVAGWGAFLKNSVSKNDYLGEYTGEL 748 (864)
Q Consensus 715 ~~l~V~kS-~~kG~GLfA~edI~KGefI~EY~GEV 748 (864)
+.|.|... ...|+||+|+++|++|+.|...--.+
T Consensus 38 ~~v~i~~~~~~~G~Gv~A~~dI~~ge~ll~IP~~~ 72 (449)
T 3qxy_A 38 PKVAVSRQGTVAGYGMVARESVQAGELLFVVPRAA 72 (449)
T ss_dssp TTEEEESSSCSSSSEEEESSCBCTTCEEEEEEGGG
T ss_pred CceEEEecCCCceEEEEECCCCCCCCEEEEeCcHH
Confidence 46788764 46899999999999999998754443
No 116
>3lcn_C MRNA transport factor GFD1; nuclear mRNA export, metal-binding, nucleus, RNA-binding, ZI finger, membrane, nuclear pore complex; 2.00A {Saccharomyces cerevisiae}
Probab=27.99 E-value=75 Score=22.83 Aligned_cols=21 Identities=29% Similarity=0.442 Sum_probs=16.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHH
Q 002934 28 TYKLNQLKKQVQAERVVSVKD 48 (864)
Q Consensus 28 ~~~i~~LKkqi~~eR~~~ik~ 48 (864)
..+|..|||+|+..|..+=+.
T Consensus 5 ~sKm~lLKKKIEEQr~i~~~~ 25 (29)
T 3lcn_C 5 ASKMKLLKKKIEEQREILQKT 25 (29)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 568999999999888766443
No 117
>3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens}
Probab=25.04 E-value=24 Score=36.25 Aligned_cols=26 Identities=19% Similarity=0.390 Sum_probs=22.3
Q ss_pred CCCcccCCCccccC-CCCCCccccccc
Q 002934 627 KQCPCLHNGTCCEK-YCGCSKSCKNRF 652 (864)
Q Consensus 627 ~~C~C~~~g~~Ce~-~CgC~~~C~nRf 652 (864)
.+|.+......|.. .|+|...|.||.
T Consensus 59 ~~C~nr~~~~EC~~~~C~c~~~C~Nr~ 85 (232)
T 3ooi_A 59 SECINRMLLYECHPTVCPAGGRCQNQC 85 (232)
T ss_dssp SCCHHHHTTBCCCTTTCTTGGGCCCCH
T ss_pred CCCcCcCceeEeCCCCCCCCCCcCCcc
Confidence 46788888899998 799999999984
No 118
>1ofc_X ISWI protein; nuclear protein, chromatin remodeling factor, ATPase, SANT domain, nucleosome recognition; HET: GLC G4D; 1.9A {Drosophila melanogaster} SCOP: a.4.1.3 a.4.1.13 a.187.1.1 PDB: 2nog_A
Probab=23.38 E-value=59 Score=35.16 Aligned_cols=44 Identities=27% Similarity=0.375 Sum_probs=38.1
Q ss_pred CCCCcHHHHHHHHHhHhhcCCchHH-HHHhhhCCCCcHHHHHHHHhh
Q 002934 497 SSEWKPIEKELYLKGVEIFGRNSCL-IARNLLSGLKTCMEVSTYMRD 542 (864)
Q Consensus 497 ~~~W~~~E~~l~~k~v~ifG~N~C~-iA~~ll~g~KTC~EV~~ym~~ 542 (864)
-..|+.-|-..|.++.+.||++... ||.-+ +.||.-||-+|+..
T Consensus 110 F~~W~rrdf~~Fi~a~~kyGr~~~~~IA~ev--~~Kt~eEV~~Y~~v 154 (304)
T 1ofc_X 110 FTAWTKRDFNQFIKANEKYGRDDIDNIAKDV--EGKTPEEVIEYNAV 154 (304)
T ss_dssp CTTCCHHHHHHHHHHHHHHCTTCHHHHTTSS--TTCCHHHHHHHHHH
T ss_pred hcccCHHHHHHHHHHHHHhCHHHHHHHHHHh--cCCCHHHHHHHHHH
Confidence 4789999999999999999998766 77655 67999999999864
No 119
>2ckx_A NGTRF1, telomere binding protein TBP1; nuclear protein; 1.9A {Nicotiana tabacum} SCOP: a.4.1.3 PDB: 2qhb_A
Probab=22.65 E-value=82 Score=27.68 Aligned_cols=27 Identities=19% Similarity=0.171 Sum_probs=25.2
Q ss_pred CCcHHHHHHHHHhHhhcCC-chHHHHHh
Q 002934 499 EWKPIEKELYLKGVEIFGR-NSCLIARN 525 (864)
Q Consensus 499 ~W~~~E~~l~~k~v~ifG~-N~C~iA~~ 525 (864)
.||+-|..++..+|+.||. +.-.|++.
T Consensus 2 ~WT~eEd~~L~~gv~k~G~g~W~~I~~~ 29 (83)
T 2ckx_A 2 PFSVAEVEALVEAVEHLGTGRWRDVKMR 29 (83)
T ss_dssp CCCHHHHHHHHHHHHHHCSSCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCcHHHHHh
Confidence 5999999999999999998 99999985
No 120
>1wvo_A Sialic acid synthase; antifreeze protein like domain, N-acetylneuraminic acid phosphate synthase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.99 E-value=30 Score=30.03 Aligned_cols=17 Identities=29% Similarity=0.302 Sum_probs=14.9
Q ss_pred EEEEccCCCCCCeEEEe
Q 002934 812 GIFAKEHIEASEELFYD 828 (864)
Q Consensus 812 ~~fA~RDI~aGEELTfD 828 (864)
.++|.+||++||-||-+
T Consensus 8 slvA~rdI~~Gevit~~ 24 (79)
T 1wvo_A 8 SVVAKVKIPEGTILTMD 24 (79)
T ss_dssp EEEESSCBCTTCBCCGG
T ss_pred EEEEeCccCCCCCcCHH
Confidence 58899999999999854
Done!