Query 002940
Match_columns 863
No_of_seqs 298 out of 924
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 07:20:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002940.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002940hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kmv_A Alpha-L-arabinofuranosi 99.8 7.7E-21 2.6E-25 186.8 10.7 112 725-845 8-120 (157)
2 1wd3_A Alpha-L-arabinofuranosi 99.8 2.5E-21 8.6E-26 214.9 3.0 153 690-859 296-453 (482)
3 3kmv_A Alpha-L-arabinofuranosi 99.7 8.8E-17 3E-21 158.1 11.3 125 680-828 23-150 (157)
4 3akh_A Putative secreted alpha 99.3 4E-12 1.4E-16 145.9 11.1 126 716-851 311-437 (468)
5 1wd3_A Alpha-L-arabinofuranosi 99.2 2.7E-11 9.2E-16 135.1 10.7 149 658-826 324-481 (482)
6 2ahf_A Unsaturated glucuronyl 99.2 1.3E-10 4.4E-15 129.9 14.6 230 181-439 43-316 (377)
7 2zzr_A Unsaturated glucuronyl 99.1 4.5E-10 1.6E-14 126.1 16.1 226 181-439 69-341 (397)
8 3akh_A Putative secreted alpha 99.1 1.6E-10 5.5E-15 132.6 12.0 135 666-826 322-459 (468)
9 3pmm_A Putative cytoplasmic pr 98.8 9.3E-09 3.2E-13 115.2 11.1 229 182-446 70-334 (382)
10 3k11_A Putative glycosyl hydro 98.7 1.1E-07 3.9E-12 108.1 14.4 300 114-446 18-366 (445)
11 3k7x_A LIN0763 protein; Q92DQ0 98.7 1.3E-07 4.5E-12 104.6 14.3 168 183-373 49-236 (349)
12 2gz6_A N-acetyl-D-glucosamine 98.5 1.3E-06 4.3E-11 96.9 17.1 243 181-437 54-333 (388)
13 1nc5_A Hypothetical protein YT 98.4 2.6E-07 8.9E-12 102.9 8.6 229 181-443 42-313 (373)
14 3gt5_A N-acetylglucosamine 2-e 98.2 1.5E-05 5.2E-10 89.4 14.7 240 181-437 53-339 (402)
15 3k7x_A LIN0763 protein; Q92DQ0 98.1 1.7E-05 5.7E-10 87.8 13.3 179 241-437 42-242 (349)
16 2gz6_A N-acetyl-D-glucosamine 97.9 2.3E-05 7.8E-10 86.8 9.8 182 182-373 117-327 (388)
17 2zbl_A Putative isomerase; N-a 97.9 0.00014 4.7E-09 82.1 15.5 245 181-442 52-349 (421)
18 3pmm_A Putative cytoplasmic pr 97.8 0.00025 8.6E-09 79.3 16.7 234 196-462 22-290 (382)
19 3gt5_A N-acetylglucosamine 2-e 97.5 0.00029 9.9E-09 78.9 11.0 183 183-373 116-333 (402)
20 1fp3_A N-acyl-D-glucosamine 2- 97.4 0.00095 3.2E-08 74.3 13.9 248 182-444 58-349 (402)
21 2zbl_A Putative isomerase; N-a 96.9 0.0019 6.6E-08 72.7 9.0 182 184-373 115-339 (421)
22 1nc5_A Hypothetical protein YT 96.8 0.0039 1.3E-07 69.2 11.0 166 267-452 13-186 (373)
23 3k11_A Putative glycosyl hydro 96.8 0.012 4.2E-07 66.9 14.9 235 195-458 26-317 (445)
24 1fp3_A N-acyl-D-glucosamine 2- 96.7 0.0034 1.2E-07 69.8 8.7 176 183-373 125-337 (402)
25 2zzr_A Unsaturated glucuronyl 96.5 0.0084 2.9E-07 67.3 10.7 140 186-330 179-340 (397)
26 2ahf_A Unsaturated glucuronyl 96.5 0.0081 2.8E-07 67.0 10.0 140 186-330 154-315 (377)
27 3h7l_A Endoglucanase; dehydrog 96.2 0.091 3.1E-06 61.6 17.2 242 199-461 190-497 (586)
28 1nxc_A Mannosyl-oligosaccharid 94.7 0.085 2.9E-06 60.5 10.0 195 251-458 110-353 (478)
29 3e6u_A LANC-like protein 1; al 93.7 0.19 6.6E-06 56.3 10.0 128 186-331 237-366 (411)
30 1x9d_A Endoplasmic reticulum m 92.7 0.48 1.6E-05 55.0 11.4 176 251-436 174-391 (538)
31 3e6u_A LANC-like protein 1; al 92.5 0.11 3.6E-06 58.5 5.4 179 182-373 167-358 (411)
32 2ri9_A Mannosyl-oligosaccharid 90.5 0.94 3.2E-05 51.9 10.5 178 251-437 92-323 (475)
33 1hcu_A Alpha-1,2-mannosidase; 89.3 0.95 3.3E-05 52.2 9.4 178 251-437 105-336 (503)
34 1ks8_A Endo-B-1,4-glucanase; c 88.1 2.5 8.5E-05 47.8 11.6 264 166-460 48-351 (433)
35 1dl2_A Class I alpha-1,2-manno 87.5 0.77 2.6E-05 53.0 7.1 80 251-330 104-203 (511)
36 1ut9_A Cellulose 1,4-beta-cell 87.3 2 6.8E-05 50.7 10.6 129 199-329 227-381 (609)
37 3gzk_A Cellulase; fold from GH 87.2 1.4 5E-05 51.1 9.2 160 166-330 137-334 (537)
38 1nxc_A Mannosyl-oligosaccharid 86.8 0.97 3.3E-05 51.8 7.3 188 191-386 184-414 (478)
39 2g0d_A Nisin biosynthesis prot 86.6 3.2 0.00011 45.9 11.3 176 187-373 141-348 (409)
40 2yik_A Endoglucanase; hydrolas 85.6 2.3 7.9E-05 50.2 10.0 158 166-329 110-306 (611)
41 1clc_A Endoglucanase CELD; EC: 83.2 1.9 6.5E-05 51.2 7.8 200 124-329 123-377 (639)
42 1tf4_A T. fusca endo/EXO-cellu 82.6 5.3 0.00018 47.1 11.2 159 166-330 49-241 (605)
43 2ri9_A Mannosyl-oligosaccharid 82.6 3.7 0.00013 47.0 9.6 132 193-333 175-327 (475)
44 2g0d_A Nisin biosynthesis prot 82.5 5.1 0.00017 44.2 10.6 128 187-328 213-353 (409)
45 2xfg_A Endoglucanase 1; hydrol 82.2 4.9 0.00017 45.9 10.4 157 166-329 70-260 (466)
46 1ia6_A Cellulase CEL9M; cellul 79.9 5.9 0.0002 44.8 10.0 267 166-460 50-355 (441)
47 1g87_A Endocellulase 9G; endog 79.7 10 0.00035 44.8 12.3 157 166-330 49-239 (614)
48 1r76_A Pectate lyase; A-helica 79.3 34 0.0012 38.3 15.6 147 63-222 19-192 (408)
49 1hcu_A Alpha-1,2-mannosidase; 78.8 9.8 0.00034 43.8 11.5 136 181-325 101-269 (503)
50 2v8i_A Pectate lyase; periplas 74.5 4.8 0.00016 45.6 7.0 72 252-328 379-454 (543)
51 2yug_A Protein FRG1; spliceoso 69.9 36 0.0012 32.8 11.4 92 676-791 34-127 (155)
52 2kll_A Interleukin-33; beta-tr 68.7 80 0.0027 29.8 16.5 113 662-791 20-134 (161)
53 3h7l_A Endoglucanase; dehydrog 64.7 24 0.00082 41.4 10.4 136 186-329 309-478 (586)
54 1ia6_A Cellulase CEL9M; cellul 64.2 12 0.0004 42.4 7.5 122 185-328 213-336 (441)
55 1ks8_A Endo-B-1,4-glucanase; c 62.9 18 0.0006 40.8 8.7 118 185-329 215-335 (433)
56 2v8i_A Pectate lyase; periplas 62.5 23 0.00077 40.2 9.1 87 182-281 375-461 (543)
57 2w87_A Esterase D, XYL-CBM35; 54.5 39 0.0013 31.7 8.3 38 542-580 40-78 (139)
58 1x9d_A Endoplasmic reticulum m 46.6 57 0.002 37.8 9.4 139 181-326 170-327 (538)
59 2w3j_A Carbohydrate binding mo 46.5 66 0.0022 30.4 8.5 38 542-580 40-78 (145)
60 1dl2_A Class I alpha-1,2-manno 41.4 1.2E+02 0.004 35.0 10.9 141 182-327 101-266 (511)
61 1gxm_A Pectate lyase; mechanis 36.0 95 0.0033 33.8 8.6 97 177-282 71-182 (332)
62 2wry_A IL-1 beta, interleukin- 33.2 28 0.00097 34.1 3.6 37 762-803 110-146 (162)
63 2nvh_A IL-1 beta, interleukin- 32.1 20 0.00067 34.9 2.2 28 774-803 108-135 (153)
64 2ila_A Interleukin-1 alpha; cy 31.3 19 0.00065 35.1 1.9 26 774-803 114-139 (155)
65 1md6_A Interleukin 1 family, m 30.9 20 0.00068 34.9 2.0 27 775-803 107-133 (154)
66 2w47_A Lipolytic enzyme, G-D-S 29.7 1.6E+02 0.0055 27.4 8.2 38 542-580 41-79 (144)
67 1ilt_A Interleukin-1 receptor 27.1 23 0.00079 34.3 1.7 27 775-803 108-134 (152)
68 3llp_A Fascin; beta-trefoil, a 26.6 5.3E+02 0.018 29.4 13.1 51 735-791 226-276 (493)
69 3ltq_A Interleukin-1 beta; lan 22.0 39 0.0013 33.4 2.2 28 774-803 126-153 (171)
70 1dm9_A Hypothetical 15.5 KD pr 21.4 1E+02 0.0035 28.8 5.0 34 572-614 35-68 (133)
71 2x2s_A Agglutinin, agglutinin 20.2 1.9E+02 0.0065 27.8 6.4 45 758-803 92-138 (153)
No 1
>3kmv_A Alpha-L-arabinofuranosidase B; protein:carboydrate interactions, carbohydrate-binding modul trefoil fold, CBM42, sugar binding protein; 1.80A {Clostridium thermocellum}
Probab=99.83 E-value=7.7e-21 Score=186.83 Aligned_cols=112 Identities=21% Similarity=0.327 Sum_probs=100.9
Q ss_pred CCccccCCCCCCCceEEeecCCceEEEecCCCCCCCceEEEeeccCCCC-CeEEEeecCCcceEEEEeeccCCCCcEEEE
Q 002940 725 GKSVMLEPFDSPGMLVIQHETDDELVVTDSFIAQGSSVFHLVAGLDGGD-RTVSLESETYKGCFVYTAVNLQSSESTKLG 803 (863)
Q Consensus 725 g~~v~l~p~~~p~~~v~~~~~~~~l~v~~~~~~~~~s~f~~vpGl~g~~-g~vSles~~~pg~~~~~~~~~~~g~~~~l~ 803 (863)
++.|+|+++++|++||||++..+ ++++++...+|++|++||||++.+ |+|||||+++||+|||+. |..|+|+
T Consensus 8 ~~~vsl~S~n~p~~ylRh~~~~~--~~~~~~~~~~datF~vvpGLa~~~~g~VSfES~n~Pg~yLRh~-----~~~l~L~ 80 (157)
T 3kmv_A 8 ITKAKFQSYNYPNMYIRHANFDA--RIDENVTPEMDSQWELVPGLANSGDGYVSIQSVNYPGYYLRHS-----NYDLSLE 80 (157)
T ss_dssp --CBEEEESSSTTCEEEEETTEE--EEESSCSSGGGGCEEEEECSSCCSTTEEEEEESSSTTEEEEEE-----TTEEEEE
T ss_pred CccEEEEecCCCCcEEEEeCCeE--EEccCCCCccCceEEEeCCcCCCCCCEEEEEECCCCCcEEEEe-----CCEEEEe
Confidence 45899999999999999997765 667777788999999999998865 899999999999999996 8999999
Q ss_pred eecCCCccccccccceecccCCCccCCceEEEecCCCcchhc
Q 002940 804 CISESTEAGFNNAASFVIEKGLSEYHPISFVAKGANRNFLLA 845 (863)
Q Consensus 804 ~~~~~~~~~f~~~asF~~~~gl~~y~piSf~a~g~~~~~ll~ 845 (863)
+ .++++.|+++|+|..++||++...+||++...++.||..
T Consensus 81 ~--~~~s~~f~~dATF~~~~GLa~~~~vSfeS~n~Pg~yLrh 120 (157)
T 3kmv_A 81 K--NDGTSLFAESATFKIVPGLADPSYISFQSYNFPTRYIRH 120 (157)
T ss_dssp E--CCSCHHHHHTTCEEEEECSSCTTSEEEEESSSTTEEEEE
T ss_pred c--cCCCCCccCCceEEEccCccCCCcEEEEEEcCCCeEEEE
Confidence 7 578889999999999999999999999999999999976
No 2
>1wd3_A Alpha-L-arabinofuranosidase B; beta-sandwich, beta-trefoil, hydrolase; HET: NAG; 1.75A {Aspergillus kawachii} SCOP: b.29.1.21 b.42.8.1 PDB: 1wd4_A* 2d44_A* 2d43_A*
Probab=99.81 E-value=2.5e-21 Score=214.89 Aligned_cols=153 Identities=16% Similarity=0.174 Sum_probs=126.3
Q ss_pred eecCCCCCccccceEEEEEecCCCCCccccccCCCCCccccCCCC--CCCceEEeecCCceEEEecC---CCCCCCceEE
Q 002940 690 EKFPKSGTDAALHATFRLILNDSSGSEFSSLNDFIGKSVMLEPFD--SPGMLVIQHETDDELVVTDS---FIAQGSSVFH 764 (863)
Q Consensus 690 ~~~p~~gt~~~~~~~fr~~~~~~~~~~~~~p~~~~g~~v~l~p~~--~p~~~v~~~~~~~~l~v~~~---~~~~~~s~f~ 764 (863)
...|.+|||.++||+||.+-..+.+ ....|.-..|..|+|++.+ +|++||||.+...+|....+ .....|++|+
T Consensus 296 ~~~Psd~Td~aVqAnivAa~y~~~s-~~s~pgLa~g~~VSLrs~s~n~PgrYLRH~~~~vrL~~V~s~sSa~~k~DATF~ 374 (482)
T 1wd3_A 296 SGYPSDDTENSVQENIVAAKYVVGS-LVSGPSFTSGEVVSLRVTTPGYTTRYIAHTDTTVNTQVVDDDSSTTLKEEASWT 374 (482)
T ss_dssp SSCCCHHHHHHHHHHHHHHCEEECC-CCCSSCCCTTCEEEEEECSTTCTTEEEEEETTEEEEEECCTTSCHHHHHHTCEE
T ss_pred ecCCChHHHHHHhhceeeeeccCCc-cccCCccccCceEEEEECcCCCCCeEEEEcCCcEEEEecccCCCcccccceeEE
Confidence 3468899999999999955222222 4455666889999999888 99999999966654443222 2235789999
Q ss_pred EeeccCCCCCeEEEeecCCcceEEEEeeccCCCCcEEEEeecCCCccccccccceecccCCCccCCceEEEecCCCcchh
Q 002940 765 LVAGLDGGDRTVSLESETYKGCFVYTAVNLQSSESTKLGCISESTEAGFNNAASFVIEKGLSEYHPISFVAKGANRNFLL 844 (863)
Q Consensus 765 ~vpGl~g~~g~vSles~~~pg~~~~~~~~~~~g~~~~l~~~~~~~~~~f~~~asF~~~~gl~~y~piSf~a~g~~~~~ll 844 (863)
+||||++ +++|||||+++|||||||. +.+|+|+ + .++++.|+++|||..++||++++ +||++.+
T Consensus 375 VVpGLAd-~g~VSFES~n~PG~YLRH~-----n~~LrL~-~-~DgS~~FrqDATF~~~~GL~~~g-vSFeS~n------- 438 (482)
T 1wd3_A 375 VVTGLAN-SQCFSFESVDTPGSYIRHY-----NFELLLN-A-NDGTKQFHEDATFCPQAALNGEG-TSLRSWS------- 438 (482)
T ss_dssp EEECSSC-TTSEEEEESSSTTEEEEEE-----TTEEEEE-E-CCCCHHHHHHTCEEEEECTTSSS-EEEEESS-------
T ss_pred EeccccC-CCeEEEEecCCCCceEEEe-----CCEEEEe-c-CCCCcccccCceeEeccCCCCCc-eeEEEEC-------
Confidence 9999998 7999999999999999996 8899999 4 48888999999999999999988 9999998
Q ss_pred cccccccccceEEEE
Q 002940 845 APLLSLRDESYTVYF 859 (863)
Q Consensus 845 ~pl~~~~~~~~~~~~ 859 (863)
.|..-||++.|++|-
T Consensus 439 ~PgrYLRH~n~~Lyl 453 (482)
T 1wd3_A 439 YPTRYFRHYENVLYA 453 (482)
T ss_dssp STTCEEEEETTEEEE
T ss_pred CCCcEEEEeCCEEEE
Confidence 788888999999997
No 3
>3kmv_A Alpha-L-arabinofuranosidase B; protein:carboydrate interactions, carbohydrate-binding modul trefoil fold, CBM42, sugar binding protein; 1.80A {Clostridium thermocellum}
Probab=99.68 E-value=8.8e-17 Score=158.05 Aligned_cols=125 Identities=14% Similarity=0.181 Sum_probs=94.1
Q ss_pred EeecCCceeeeecCCCCCccccceEEEEEecCCCCCccccccCCCCCccccCCCCCCCceEEeecCCceEEEecCCCC--
Q 002940 680 LTNSNQSITMEKFPKSGTDAALHATFRLILNDSSGSEFSSLNDFIGKSVMLEPFDSPGMLVIQHETDDELVVTDSFIA-- 757 (863)
Q Consensus 680 ~~~~~~~~~~~~~p~~gt~~~~~~~fr~~~~~~~~~~~~~p~~~~g~~v~l~p~~~p~~~v~~~~~~~~l~v~~~~~~-- 757 (863)
+...+..+.+.. +....-.|+||++.+-.++ .+-.|++|+.++|++||||+|.++ +|+.+..+
T Consensus 23 lRh~~~~~~~~~----~~~~~~datF~vvpGLa~~---------~~g~VSfES~n~Pg~yLRh~~~~l--~L~~~~~s~~ 87 (157)
T 3kmv_A 23 IRHANFDARIDE----NVTPEMDSQWELVPGLANS---------GDGYVSIQSVNYPGYYLRHSNYDL--SLEKNDGTSL 87 (157)
T ss_dssp EEEETTEEEEES----SCSSGGGGCEEEEECSSCC---------STTEEEEEESSSTTEEEEEETTEE--EEEECCSCHH
T ss_pred EEEeCCeEEEcc----CCCCccCceEEEeCCcCCC---------CCCEEEEEECCCCCcEEEEeCCEE--EEeccCCCCC
Confidence 344555555543 2334678999999552222 113799999999999999996655 66654433
Q ss_pred -CCCceEEEeeccCCCCCeEEEeecCCcceEEEEeeccCCCCcEEEEeecCCCccccccccceecccCCCcc
Q 002940 758 -QGSSVFHLVAGLDGGDRTVSLESETYKGCFVYTAVNLQSSESTKLGCISESTEAGFNNAASFVIEKGLSEY 828 (863)
Q Consensus 758 -~~~s~f~~vpGl~g~~g~vSles~~~pg~~~~~~~~~~~g~~~~l~~~~~~~~~~f~~~asF~~~~gl~~y 828 (863)
..|+.|++||||++ +|.|||||.++||||||+. |..++|+| . +++.|+++|||...+|.-+-
T Consensus 88 f~~dATF~~~~GLa~-~~~vSfeS~n~Pg~yLrh~-----~~~l~l~~--~-~t~~fr~dATF~~~~~~~~~ 150 (157)
T 3kmv_A 88 FAESATFKIVPGLAD-PSYISFQSYNFPTRYIRHY-----NYLLRLDE--I-VTELDRQDATFKIISEDTQL 150 (157)
T ss_dssp HHHTTCEEEEECSSC-TTSEEEEESSSTTEEEEEE-----TTEEEEEE--C-CSHHHHHHTCEEEEC-----
T ss_pred ccCCceEEEccCccC-CCcEEEEEEcCCCeEEEEE-----CCEEEEec--C-CCchhccCCeEEEecCcchh
Confidence 57899999999999 7999999999999999997 88999997 3 68889999999999997653
No 4
>3akh_A Putative secreted alpha L-arabinofuranosidase II; five-bladed beta propeller, beta-trefoil, hydrolase; HET: AHR; 1.70A {Streptomyces avermitilis} PDB: 3akf_A* 3akg_A* 3aki_A*
Probab=99.31 E-value=4e-12 Score=145.90 Aligned_cols=126 Identities=22% Similarity=0.284 Sum_probs=108.7
Q ss_pred ccccccCCCCCccccCCCCCCCceEEeecCCceEEEecCCCCCCCceEEEeeccCCCCCeEEEeecCCcceEEEEeeccC
Q 002940 716 EFSSLNDFIGKSVMLEPFDSPGMLVIQHETDDELVVTDSFIAQGSSVFHLVAGLDGGDRTVSLESETYKGCFVYTAVNLQ 795 (863)
Q Consensus 716 ~~~~p~~~~g~~v~l~p~~~p~~~v~~~~~~~~l~v~~~~~~~~~s~f~~vpGl~g~~g~vSles~~~pg~~~~~~~~~~ 795 (863)
.+..|...+.+.+++++.+.|+.||||.+ ..|+++.+.....+++|++||||++ +++|||||+++||.|||+.
T Consensus 311 ~~~~~~~~g~~~~s~~s~~~pg~ylrh~~--~~v~l~~~~~~~~d~tf~~~~gl~~-~~~~s~~s~~ypg~~lr~~---- 383 (468)
T 3akh_A 311 NFGIPVADGVTPVRFSSYNYPDRYIRHWD--FRARIEANVTNLADSQFRVVTGLAG-SGTISLESANYPGYYLRHK---- 383 (468)
T ss_dssp ECCCCCCSEECCBCEEESSSTTCEEEEET--TEEEEESSCSSGGGGCEEEEECTTC-TTCEEEEESSSTTEEEEEE----
T ss_pred EeccccccCccccccccccccccEEEEec--CcEEEccCCCCcccceEEEccCCCC-CceEEEEEEeCCCeEEEEE----
Confidence 46667777777889999999999999984 4578887766678999999999988 6999999999999999996
Q ss_pred CCCcEEEEeecCCCccccccccceecccCCCcc-CCceEEEecCCCcchhccccccc
Q 002940 796 SSESTKLGCISESTEAGFNNAASFVIEKGLSEY-HPISFVAKGANRNFLLAPLLSLR 851 (863)
Q Consensus 796 ~g~~~~l~~~~~~~~~~f~~~asF~~~~gl~~y-~piSf~a~g~~~~~ll~pl~~~~ 851 (863)
+..|+|+ + .++++.|+++|+|++++||++- ..+||+....+..||.+==++|+
T Consensus 384 -~~~~~~~-~-~~~~~~~~~~atf~~~~g~~~~~~~~s~~s~~~p~~~lr~~~~~l~ 437 (468)
T 3akh_A 384 -NYEVWVE-K-NDGSSAFKNDASFSRRAGLADSADGIAFESYNYPGRYLRHYENLLR 437 (468)
T ss_dssp -TTEEEEE-E-CCSCHHHHHHTCEEEEECSSCTTTCEEEEESSSTTEEEEEETTEEE
T ss_pred -CCEEEEe-c-CCCCccccCCCcEEEecCcCCCcCcEEEEeecCCceEEEEeCCeEE
Confidence 7799999 3 4778889999999999999997 89999999999999875444443
No 5
>1wd3_A Alpha-L-arabinofuranosidase B; beta-sandwich, beta-trefoil, hydrolase; HET: NAG; 1.75A {Aspergillus kawachii} SCOP: b.29.1.21 b.42.8.1 PDB: 1wd4_A* 2d44_A* 2d43_A*
Probab=99.21 E-value=2.7e-11 Score=135.10 Aligned_cols=149 Identities=18% Similarity=0.263 Sum_probs=109.9
Q ss_pred ccCCCCCcceeeeeec-CCeeEEEeecCCceeeeecCC-CCCccccceEEEEEecCCCCCccccccCCCCCccccCCCCC
Q 002940 658 IPASYNSQLITFTQEY-GNTKFVLTNSNQSITMEKFPK-SGTDAALHATFRLILNDSSGSEFSSLNDFIGKSVMLEPFDS 735 (863)
Q Consensus 658 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~-~gt~~~~~~~fr~~~~~~~~~~~~~p~~~~g~~v~l~p~~~ 735 (863)
.|.......++|+-.+ +.+.+.|.+.++.+.+++... ..+...-+|+|+++.+-.+ ...|++|+.+.
T Consensus 324 ~pgLa~g~~VSLrs~s~n~PgrYLRH~~~~vrL~~V~s~sSa~~k~DATF~VVpGLAd-----------~g~VSFES~n~ 392 (482)
T 1wd3_A 324 GPSFTSGEVVSLRVTTPGYTTRYIAHTDTTVNTQVVDDDSSTTLKEEASWTVVTGLAN-----------SQCFSFESVDT 392 (482)
T ss_dssp SSCCCTTCEEEEEECSTTCTTEEEEEETTEEEEEECCTTSCHHHHHHTCEEEEECSSC-----------TTSEEEEESSS
T ss_pred CCccccCceEEEEECcCCCCCeEEEEcCCcEEEEecccCCCcccccceeEEEeccccC-----------CCeEEEEecCC
Confidence 4544456678886654 334456667888887777533 2234466899999864222 23589999999
Q ss_pred CCceEEeecCCceEEEecCCC---CCCCceEEEeeccCCCCCeEEEeecCCcceEEEEeeccCCCCcEEEEee----cCC
Q 002940 736 PGMLVIQHETDDELVVTDSFI---AQGSSVFHLVAGLDGGDRTVSLESETYKGCFVYTAVNLQSSESTKLGCI----SES 808 (863)
Q Consensus 736 p~~~v~~~~~~~~l~v~~~~~---~~~~s~f~~vpGl~g~~g~vSles~~~pg~~~~~~~~~~~g~~~~l~~~----~~~ 808 (863)
|+.||||.+ ..|+|+++.. -..|+.|++++||.+ +| |||||.++||.||||. +..|.|.-. .-+
T Consensus 393 PG~YLRH~n--~~LrL~~~DgS~~FrqDATF~~~~GL~~-~g-vSFeS~n~PgrYLRH~-----n~~Lyla~~gg~~~~d 463 (482)
T 1wd3_A 393 PGSYIRHYN--FELLLNANDGTKQFHEDATFCPQAALNG-EG-TSLRSWSYPTRYFRHY-----ENVLYAASNGGVQTFD 463 (482)
T ss_dssp TTEEEEEET--TEEEEEECCCCHHHHHHTCEEEEECTTS-SS-EEEEESSSTTCEEEEE-----TTEEEEECSSCSSGGG
T ss_pred CCceEEEeC--CEEEEecCCCCcccccCceeEeccCCCC-Cc-eeEEEECCCCcEEEEe-----CCEEEEecCCCccccc
Confidence 999999984 5667776443 236899999999988 56 9999999999999997 778999520 124
Q ss_pred CccccccccceecccCCC
Q 002940 809 TEAGFNNAASFVIEKGLS 826 (863)
Q Consensus 809 ~~~~f~~~asF~~~~gl~ 826 (863)
+++.|++++||+...|++
T Consensus 464 ~t~~f~~DaTF~v~~pwA 481 (482)
T 1wd3_A 464 SKTSFNNDVSFEIETAFA 481 (482)
T ss_dssp CSTTHHHHTCEEEEECTT
T ss_pred CcccccCCceEEeccCCC
Confidence 567799999999999876
No 6
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=99.18 E-value=1.3e-10 Score=129.93 Aligned_cols=230 Identities=13% Similarity=0.089 Sum_probs=143.4
Q ss_pred ccchHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHhcCCcccccCCchhhhhhhhcCCCccchhhHHHHHHHHHHHHH
Q 002940 181 FVGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYT 260 (863)
Q Consensus 181 ~~GhyLsala~~ya~TgD~~lk~k~~~~Vd~L~~~Q~~~~dGYlga~p~~~~~r~~~l~~~W~pyYt~HKI~aGLld~Y~ 260 (863)
+.|.|++.++++|..|+|+++++.++.+.+.+.+.-.+ +..-.+|+.++.| +..+...|+
T Consensus 43 t~GF~~g~lw~~ye~Tgd~~~~~~a~~~~~~l~~~~~~---------------~~~~~~HD~Gf~~-----~~s~~~~y~ 102 (377)
T 2ahf_A 43 TDGFWSGILWLCYEYTGDEQYREGAVRTVASFRERLDR---------------FENLDHHNIGFLY-----SLSAKAQWI 102 (377)
T ss_dssp CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTT---------------TTTCCBSTHHHHH-----HTTHHHHHH
T ss_pred CcchHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhhc---------------ccCCCCCCchHhh-----HHHHHHHHH
Confidence 58999999999999999999999999998877643210 0011246666644 334557899
Q ss_pred HcCCHhHHHHHHHHHHHHHHHhhh---hhccchh---hhh--hccccccccchH-HHHHHHHHhcCCHHHHHHHhhccc-
Q 002940 261 YADNAEALRMTTWMVEYFYNRVQN---VIKKYSI---ERH--WQTLNEEAGGMN-DVLYKLFCITQDPKHLMLAHLFDK- 330 (863)
Q Consensus 261 ~tGn~~AL~va~~~ad~~~~r~~~---~~~~~~~---~~~--~~~l~~E~GGmn-e~L~~LY~~TGd~ryL~lA~~f~~- 330 (863)
+|||+++++++...|++++.|+.+ .|+.+.. ..+ +.++++- || +.|++.+++|||++|++.|.+..+
T Consensus 103 ltg~~~~~~~~~~aA~~L~~r~~~~~g~i~sw~~~~~~~~~~~~iID~m---mni~~L~~A~~~~gd~~y~~~A~~~a~~ 179 (377)
T 2ahf_A 103 VEKDESARKLALDAADVLMRRWRADAGIIQAWGPKGDPENGGRIIIDCL---LNLPLLLWAGEQTGDPEYRRVAEAHALK 179 (377)
T ss_dssp HHCCHHHHHHHHHHHHHHHTTEETTTTEECCBSSTTCTTTTTEEEGGGG---GGHHHHHHHHHHHCCTHHHHHHHHHHHH
T ss_pred HhCCHHHHHHHHHHHHHHHHhCCCCCCeEEeccCCCCCCCCceEEechH---HHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 999999999999999999999874 2343321 111 2345665 56 789999999999999999987321
Q ss_pred --ccccch---hh--ccCCCCCC--CcccCCC-------------CeeehhhHHHHHhCCchhhc----------cceec
Q 002940 331 --PCFLGL---LA--LQADDISG--FHSNTHI-------------PIVIGSQMRYEVTGDQLHKE----------GHQLE 378 (863)
Q Consensus 331 --~~~~~~---la--~~~D~l~~--~Hanthi-------------P~~~G~A~~Y~~TGD~~yl~----------~h~y~ 378 (863)
+..+.+ +. ..-|...| .|..++. =.+.|.+..|++|+|++|++ .|. .
T Consensus 180 ~l~~~~r~dgs~~h~~~~D~~tG~~~~~~t~qG~~dds~WaRGqAw~i~gl~~ly~~T~d~~yL~~A~~la~~~l~~~-~ 258 (377)
T 2ahf_A 180 SRRFLVRGDDSSYHTFYFDPENGNAIRGGTHQGNTDGSTWTRGQAWGIYGFALNSRYLGNADLLETAKRMARHFLARV-P 258 (377)
T ss_dssp HHHHTBBTTSCBCSEEEECTTTCCEEEEECSSSSSTTSCBHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTC-C
T ss_pred HHHhCcCCCCCeEEEEEeeCCCCCeeeCCCcCCcCCcchhHHHHHHHHHHHHHHHHHHCChHHHHHHHHHHHHHHHhh-H
Confidence 111111 00 00011111 1222221 13588999999999999998 332 2
Q ss_pred cccCCCCCCCCcCCc-cccccCCCCCccchhHHHHHHHHHHHhhc-ccccchHHHHHHHHHhh
Q 002940 379 SSGTNIGHFNFKSDP-KRLASNLDSNTEESCTTYNMLKVSRHLFR-WTKEIAYADYYERSLTN 439 (863)
Q Consensus 379 tGG~s~~E~~~f~~p-~~l~~~l~~~~~EtCat~nmlkl~~~L~~-~tgD~~YaD~~ERalyN 439 (863)
-.|. .+|.-. ..+.....+..+-.+++++++++++.+-. -.++.+|.+..|+++-.
T Consensus 259 ~d~~-----pywd~~~~~~~~~~~d~Sa~aiaA~~Ll~L~~~~~~~~~~~~~Y~~~A~~~l~~ 316 (377)
T 2ahf_A 259 EDGV-----VYWDFEVPQEPSSYRDSSASAITACGLLEIASQLDESDPERQRFIDAAKTTVTA 316 (377)
T ss_dssp TTSS-----CBSBTTSCCCTTSCBCHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHH
T ss_pred HhCC-----cccccCCCccCCCccCCCHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHH
Confidence 1111 023211 11211122345567777888887766310 01367899999998843
No 7
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=99.13 E-value=4.5e-10 Score=126.14 Aligned_cols=226 Identities=13% Similarity=0.068 Sum_probs=141.7
Q ss_pred ccchHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHhcCCcccccCCchhhhhhhhcCCCccchhhHHHHHHHHHHHHH
Q 002940 181 FVGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYT 260 (863)
Q Consensus 181 ~~GhyLsala~~ya~TgD~~lk~k~~~~Vd~L~~~Q~~~~dGYlga~p~~~~~r~~~l~~~W~pyYt~HKI~aGLld~Y~ 260 (863)
+.|.|++.++++|..|+|+++++.++.+.+.+.+.-.+ +..-.+||.++.| +..+...|+
T Consensus 69 t~GF~~G~lw~~ye~Tgd~~~~~~a~~~~~~l~~~~~~---------------~~~~~~HD~GF~~-----~~s~~~~y~ 128 (397)
T 2zzr_A 69 TNGFWTGCLWLAYEYNQDKKLKNIAHKNVLSFLNRINN---------------RIALDHHDLGFLY-----TPSCTAEYR 128 (397)
T ss_dssp CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHT---------------TCSCCSSTHHHHH-----TTTHHHHHH
T ss_pred CcchHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhhh---------------cccCCCCCchHHH-----HHHHHHHHH
Confidence 48999999999999999999999999998877653331 0011246656554 233446899
Q ss_pred HcCCHhHHHHHHHHHHHHHHHhhhh---hccch---h-hhhhccccccccchH-HHHHHHHHhcCCHHHHHHHhhccc--
Q 002940 261 YADNAEALRMTTWMVEYFYNRVQNV---IKKYS---I-ERHWQTLNEEAGGMN-DVLYKLFCITQDPKHLMLAHLFDK-- 330 (863)
Q Consensus 261 ~tGn~~AL~va~~~ad~~~~r~~~~---~~~~~---~-~~~~~~l~~E~GGmn-e~L~~LY~~TGd~ryL~lA~~f~~-- 330 (863)
+|||+++++++...|++++.|+.+. |+.+. . ...+.++++- || +.|++.+++|||++|++.|.+..+
T Consensus 129 ltg~~~~~~~~~~aA~~L~~r~~~~~g~iqsw~~~~~~~~~~~iID~~---mni~~L~~A~~~~gd~~y~~~A~~ha~~~ 205 (397)
T 2zzr_A 129 INGDVKALEATIKAADKLMERYQEKGGFIQAWGELGYKEHYRLIIDCL---LNIQLLFFAYEQTGDEKYRQVAVNHFYAS 205 (397)
T ss_dssp HHCCHHHHHHHHHHHHHHHTTEETTTTEECCSSSTTCGGGCEEETTHH---HHTHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HhCCHHHHHHHHHHHHHHHHHhCcCCCEEEecccCCCCCCCceeechH---hHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 9999999999999999999998642 23322 0 1122334554 77 789999999999999999986321
Q ss_pred -ccccch---hh--ccCCCCCCC--cccCCC-------------CeeehhhHHHHHhCCchhhc----------cceecc
Q 002940 331 -PCFLGL---LA--LQADDISGF--HSNTHI-------------PIVIGSQMRYEVTGDQLHKE----------GHQLES 379 (863)
Q Consensus 331 -~~~~~~---la--~~~D~l~~~--Hanthi-------------P~~~G~A~~Y~~TGD~~yl~----------~h~y~t 379 (863)
+..+.+ +. ..-|+..|. |..|+. =.+.|.+..|+.|||++|++ .|. .-
T Consensus 206 l~~~~r~dgs~~h~~~~d~~~G~~~~~~t~qGy~dds~WaRGqAw~i~gl~~lY~~T~d~~yL~~A~~la~~~l~~~-~~ 284 (397)
T 2zzr_A 206 ANNVVRDDSSAFHTFYFDPETGEPLKGVTRQGYSDESSWARGQAWGIYGIPLSYRKMKDYQQIILFKGMTNYFLNRL-PE 284 (397)
T ss_dssp HHHTBCTTSCBCSEEEECTTTCCEEEEECTTSSSTTSCBHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTC-CT
T ss_pred HHhCcCCCCCeEEEEEeeCCCCCcccCCcccccCcchhhHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhh-HH
Confidence 111110 00 000111111 111111 13678899999999999998 332 21
Q ss_pred ccCCCCCCCCcC-CccccccCCCCCccchhHHHHHHHHHHHhhccccc---ch--HHHHHHHHHhh
Q 002940 380 SGTNIGHFNFKS-DPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKE---IA--YADYYERSLTN 439 (863)
Q Consensus 380 GG~s~~E~~~f~-~p~~l~~~l~~~~~EtCat~nmlkl~~~L~~~tgD---~~--YaD~~ERalyN 439 (863)
.|. .+|. ..+.++....+..+-.+++++++++++. +++ .+ |.+..|+++-.
T Consensus 285 d~~-----pywdt~~~~~~~~~~D~Sa~aiaA~~Ll~L~~~----~~~~~~~~~~Y~~~A~~~l~~ 341 (397)
T 2zzr_A 285 DKV-----SYWDLIFTDGSGQPRDTSATATAVCGIHEMLKY----LPEVDPDKETYKYAMHTMLRS 341 (397)
T ss_dssp TSC-----CBSBTTCCTTSCCCBCHHHHHHHHHHHHHHHTT----SCTTCTTHHHHHHHHHHHHHH
T ss_pred hCC-----ccccCCCCCCCCCcCCCCHHHHHHHHHHHHHHh----cCccchhhHHHHHHHHHHHHH
Confidence 111 1232 1111222222345566777778776655 454 67 99999998844
No 8
>3akh_A Putative secreted alpha L-arabinofuranosidase II; five-bladed beta propeller, beta-trefoil, hydrolase; HET: AHR; 1.70A {Streptomyces avermitilis} PDB: 3akf_A* 3akg_A* 3aki_A*
Probab=99.12 E-value=1.6e-10 Score=132.62 Aligned_cols=135 Identities=18% Similarity=0.212 Sum_probs=98.1
Q ss_pred ceeeeeecCCeeEEEeecCCceeeeecCCCCCccccceEEEEEecCCCCCccccccCCCCCccccCCCCCCCceEEeecC
Q 002940 666 LITFTQEYGNTKFVLTNSNQSITMEKFPKSGTDAALHATFRLILNDSSGSEFSSLNDFIGKSVMLEPFDSPGMLVIQHET 745 (863)
Q Consensus 666 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~gt~~~~~~~fr~~~~~~~~~~~~~p~~~~g~~v~l~p~~~p~~~v~~~~~ 745 (863)
++++....-...|. .+.++.|.++.- ++ ....++||++.+-. +...+++++.++|+.|+||+
T Consensus 322 ~~s~~s~~~pg~yl-rh~~~~v~l~~~---~~-~~~d~tf~~~~gl~-----------~~~~~s~~s~~ypg~~lr~~-- 383 (468)
T 3akh_A 322 PVRFSSYNYPDRYI-RHWDFRARIEAN---VT-NLADSQFRVVTGLA-----------GSGTISLESANYPGYYLRHK-- 383 (468)
T ss_dssp CBCEEESSSTTCEE-EEETTEEEEESS---CS-SGGGGCEEEEECTT-----------CTTCEEEEESSSTTEEEEEE--
T ss_pred ccccccccccccEE-EEecCcEEEccC---CC-CcccceEEEccCCC-----------CCceEEEEEEeCCCeEEEEE--
Confidence 44554433223454 366677777752 33 36899999884311 12347899999999999998
Q ss_pred CceEEEecCCCC---CCCceEEEeeccCCCCCeEEEeecCCcceEEEEeeccCCCCcEEEEeecCCCccccccccceecc
Q 002940 746 DDELVVTDSFIA---QGSSVFHLVAGLDGGDRTVSLESETYKGCFVYTAVNLQSSESTKLGCISESTEAGFNNAASFVIE 822 (863)
Q Consensus 746 ~~~l~v~~~~~~---~~~s~f~~vpGl~g~~g~vSles~~~pg~~~~~~~~~~~g~~~~l~~~~~~~~~~f~~~asF~~~ 822 (863)
|..|+|++...+ .+|+.|++||||++..+.|||||+++||.|||+. +..|+|+ + .+++.|+++|+|+..
T Consensus 384 ~~~~~~~~~~~~~~~~~~atf~~~~g~~~~~~~~s~~s~~~p~~~lr~~-----~~~l~~~-~--~~~~~~~~~atf~~~ 455 (468)
T 3akh_A 384 NYEVWVEKNDGSSAFKNDASFSRRAGLADSADGIAFESYNYPGRYLRHY-----ENLLRIQ-P--VSTALDRQDATFYAE 455 (468)
T ss_dssp TTEEEEEECCSCHHHHHHTCEEEEECSSCTTTCEEEEESSSTTEEEEEE-----TTEEEEE-E--CCSHHHHHHTCEEEC
T ss_pred CCEEEEecCCCCccccCCCcEEEecCcCCCcCcEEEEeecCCceEEEEe-----CCeEEEc-c--CCCchhcccceeeec
Confidence 556688754432 3689999999999844899999999999999997 7789999 3 346779999999999
Q ss_pred cCCC
Q 002940 823 KGLS 826 (863)
Q Consensus 823 ~gl~ 826 (863)
+++.
T Consensus 456 ~~~~ 459 (468)
T 3akh_A 456 KLAA 459 (468)
T ss_dssp C---
T ss_pred cchh
Confidence 8864
No 9
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=98.82 E-value=9.3e-09 Score=115.17 Aligned_cols=229 Identities=11% Similarity=0.027 Sum_probs=132.7
Q ss_pred cchHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHhcCCcccccCCchhhhhhhhcCCCccchhhHHHHHHHHHHHHHH
Q 002940 182 VGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTY 261 (863)
Q Consensus 182 ~GhyLsala~~ya~TgD~~lk~k~~~~Vd~L~~~Q~~~~dGYlga~p~~~~~r~~~l~~~W~pyYt~HKI~aGLld~Y~~ 261 (863)
.|.++.+++.+|..|+|+++++.++.+++.+.+ + +|-+ .+. ++-.+ +..+++.|+.
T Consensus 70 ~G~~~~gl~~~ye~Tgd~~y~~~a~~~~~~~~~--~---~~~~-----------~n~-D~~~~-------~~~l~~lY~~ 125 (382)
T 3pmm_A 70 HGVGLYGIYQYYQQTGDIEMRDIIDRWFADRFA--E---GATT-----------KNV-NTMAP-------FLTLAYRFEE 125 (382)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH--H---CCCC-----------CCT-TTTTT-------HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHc--C---CCCc-----------Ccc-cchHH-------HHHHHHHHHH
Confidence 689999999999999999999999999986642 2 1211 011 11122 2345689999
Q ss_pred cCCHhHHHHHHHHHHHHHHHhhhhhc-cchh------hhhhccccccccchH-HHHHHHHHhcCCHHHHHHHhhcc---c
Q 002940 262 ADNAEALRMTTWMVEYFYNRVQNVIK-KYSI------ERHWQTLNEEAGGMN-DVLYKLFCITQDPKHLMLAHLFD---K 330 (863)
Q Consensus 262 tGn~~AL~va~~~ad~~~~r~~~~~~-~~~~------~~~~~~l~~E~GGmn-e~L~~LY~~TGd~ryL~lA~~f~---~ 330 (863)
||+++.++++..+++++.+++.+... +..- ...+..++.- -|+ +.|+++|++|||++|++.|.+.. .
T Consensus 126 Tgd~~Yl~~a~~~ad~L~~~~~r~~~Ggf~~~~~~~~~~~~~WiDgl--~M~~p~La~~~~~tgd~~y~d~A~~q~~~~~ 203 (382)
T 3pmm_A 126 TGRMAYLPWLESWAEWAMHEMPRTEQGGMQHMTLAEENHQQMWDDTL--MMTVLPLAKIGKLLNRPQYVEEATYQFLLHV 203 (382)
T ss_dssp HCCGGGHHHHHHHHHHHHHTSCBCGGGCBCCCCSSCCCTTEEETTHH--HHTHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHHhhCCCCcCCCeeeecCCCCCCCcEEecch--hhhHHHHHHHHHHHCCHHHHHHHHHHHHHHH
Confidence 99999999999999999865432111 1100 0001112211 266 67899999999999999986532 2
Q ss_pred ccccchhhccCCCCCCCcccCCC------C---------eeehhhHHHHH-------hCCchhhc--cceeccccC-CCC
Q 002940 331 PCFLGLLALQADDISGFHSNTHI------P---------IVIGSQMRYEV-------TGDQLHKE--GHQLESSGT-NIG 385 (863)
Q Consensus 331 ~~~~~~la~~~D~l~~~Hanthi------P---------~~~G~A~~Y~~-------TGD~~yl~--~h~y~tGG~-s~~ 385 (863)
+.++++. +.+ ..|..++. + .++|.++.|+. +++++|++ .++ +.+-. -.+
T Consensus 204 ~~l~D~~----tGl-~~h~~~~~~~~~~~~~~WaRG~gW~~~gl~~~l~~l~~p~~~~~~~~~~~~~~~~-a~~~~~~q~ 277 (382)
T 3pmm_A 204 QNLMDRE----TGL-WFHGWNYEGRHNFARARWARGNSWLTMVIPDFLELVDLPEGNAVRRYLITVLDAQ-IAALAECQD 277 (382)
T ss_dssp HHHBCTT----TSC-BCSEEETTTTBCTTCCCBHHHHHHHHHHHHHHHHHHCCCTTCHHHHHHHHHHHHH-HHHHHHHCC
T ss_pred HHccCCC----CCC-eeeeccCCCCCCCCcceecccccHHHHHHHHHHHhhcCCcchhhHHHHHHHHHHH-HHHHHHcCC
Confidence 2333331 111 22433221 2 24778888987 44455555 111 00000 012
Q ss_pred CCCCcCCccccccCCCCCccchhHHHHHHHHHHHhhcccccchHHHHHHHHHhhhcccccC
Q 002940 386 HFNFKSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLGIQR 446 (863)
Q Consensus 386 E~~~f~~p~~l~~~l~~~~~EtCat~nmlkl~~~L~~~tgD~~YaD~~ERalyN~iLa~q~ 446 (863)
|.+.|..--.-+....+.++-.+.+|+|++..+.=+. +.+|.+..||++ +++....+
T Consensus 278 ~~G~W~~~~d~~~~y~EsSatA~~ay~ll~~~~~g~l---~~~Y~~~a~ka~-~~l~~~i~ 334 (382)
T 3pmm_A 278 DSGLWHTLLDDPHSYLEASATAGFAYGILKAVRKRYV---GQHYAGVAEKAI-RGIVQNIS 334 (382)
T ss_dssp TTSCEESBTTCTTSCEEHHHHHHHHHHHHHHHHTTSS---CGGGHHHHHHHH-HHHHHTBC
T ss_pred CCCChhhccCCCCCCccccHHHHHHHHHHHHHHcCCC---cHHHHHHHHHHH-HHHHhhCC
Confidence 3335542100011112233445556888887773221 368999999965 78877665
No 10
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.69 E-value=1.1e-07 Score=108.11 Aligned_cols=300 Identities=11% Similarity=0.008 Sum_probs=171.6
Q ss_pred ccccccCCCeEeCCCchhHHHHHHHHHHHHccCccchhHHHHHhcCCCCCCCCCCCCCCC------CcCccCcccchHHH
Q 002940 114 FLKEVSLHDVRLGSDSMHWRAQQTNLEYLLMLDVDKLVWNFRKTARLPAPGEPYGGWEEP------SCELRGHFVGHYLS 187 (863)
Q Consensus 114 ~~~p~pl~~VrL~~~~~~~~~~~~~~~yLl~ld~drlL~~FR~~agL~~~g~~ygGWE~~------~~~l~Gh~~GhyLs 187 (863)
+-.+.|.+.++.+ ..++..++-.+||....|.+++..= .|- .-..|..|... ...+.-...|..++
T Consensus 18 ~~~~~~~~~~~~~---~i~~~~d~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~y~~Gv~l~ 89 (445)
T 3k11_A 18 PAYQGTYGDLTPE---QVKKDIDRVFAYIDKETPARVVDKN---TGK--VITDYTAMGDEAQLERGAFRLASYEWGVTYS 89 (445)
T ss_dssp CCCSSCCSCCCHH---HHHHHHHHHHHHHHHTSCCCEEETT---TCC--EECCTTTCCTTEEECCCSSCTTSHHHHHHHH
T ss_pred CCCCCCCCcCCHH---HHHHHHHHHHHHHhccCcceeecCC---CCc--eeccccccccccccccCCcccCccCHHHHHH
Confidence 3456888888765 3567788888999987777766431 110 00123344431 22222244689999
Q ss_pred HHHHHHHhcCcHHHHHHHHHHHHHHHHH------HHhcCCcccccCCchhhhhhh--hcCCCccchhhHHHHHHHHHHHH
Q 002940 188 ASALMWASTHNESLKEKMSAVVSALSAC------QKEIGSGYLSAFPTEQFDRLE--ALIPVWAPYYTIHKILAGLLDQY 259 (863)
Q Consensus 188 ala~~ya~TgD~~lk~k~~~~Vd~L~~~------Q~~~~dGYlga~p~~~~~r~~--~l~~~W~pyYt~HKI~aGLld~Y 259 (863)
|++.+|..|+|+++++.+++.++.+.+. +.. .+|.+..- +.+... .+ ++ | +. +..+|+..|
T Consensus 90 gl~~ay~~Tgd~kY~~ya~~~~dfi~~~~p~~~~~~~-~~G~l~~~---~r~~~~~~~L-DD----~-g~-~~~~Li~lY 158 (445)
T 3k11_A 90 ALIAAAETTGDKRYTDYVQNRFRFLAEVAPHFKRVYE-EKGKTDSQ---LLQILTPHAL-DD----A-GA-VCTAMIKLR 158 (445)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHSCCCHH---HHHHHSCCSG-GG----T-HH-HHHHHHHHH
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHhccchhhhhhh-ccCCeecc---cccccCCCcc-hh----H-HH-HHHHHHHHH
Confidence 9999999999999999999999877653 111 24443210 000000 01 11 1 22 446688999
Q ss_pred HHcCCHhHHHHHHHHHHHHHHHhhhhhcc-ch---hhhhhccccccccchH-HHHHHHHHhcCCHH--HHHHHhhcc---
Q 002940 260 TYADNAEALRMTTWMVEYFYNRVQNVIKK-YS---IERHWQTLNEEAGGMN-DVLYKLFCITQDPK--HLMLAHLFD--- 329 (863)
Q Consensus 260 ~~tGn~~AL~va~~~ad~~~~r~~~~~~~-~~---~~~~~~~l~~E~GGmn-e~L~~LY~~TGd~r--yL~lA~~f~--- 329 (863)
+.|+++++++++..++||+..++.+.-.+ .. ....+..+++-+ |+ +.|++++++|||++ |++.|.+-.
T Consensus 159 ~~T~d~~yl~~a~~~ad~L~~~~pRt~~Ggf~h~~~~~~q~WiD~ly--M~~pfla~~~~~tgd~~~~y~d~A~~q~~~~ 236 (445)
T 3k11_A 159 LKDESLPVDGLIQNYFDFIINKEYRLADGTFARNRPQRNTLWLDDMF--MGIPAVAQMSRYDKEAKNKYLAEAVKQFLQF 236 (445)
T ss_dssp HHCTTCCCHHHHHHHHHHHHHTSCBCTTCCBCBCSSSTTEEETHHHH--HHHHHHHHHHHHCGGGHHHHHHHHHHHHHHH
T ss_pred HhcCCHHHHHHHHHHHHHHHHcCCCCCCCceeecCCCCCceEecchh--hHHHHHHHHHHHHCCcchHHHHHHHHHHHHH
Confidence 99999999999999999999887431111 10 000111123321 67 67899999999999 999987632
Q ss_pred cccccchhhccCCCCCCCcccCCC-----C---------eeehhhHHHHH-----hCCchhhc-cceeccccC-CCCCCC
Q 002940 330 KPCFLGLLALQADDISGFHSNTHI-----P---------IVIGSQMRYEV-----TGDQLHKE-GHQLESSGT-NIGHFN 388 (863)
Q Consensus 330 ~~~~~~~la~~~D~l~~~Hanthi-----P---------~~~G~A~~Y~~-----TGD~~yl~-~h~y~tGG~-s~~E~~ 388 (863)
.+.++++.. .| ..|..++. + .++|.++.|++ ++.+.+++ .+-.+.+-. -.+|.+
T Consensus 237 ~~~l~D~~t----GL-~~Hg~~~~~~~~~~~~WaRGnGW~~~gl~~~l~~lp~~~~~r~~l~~~~~~~a~~l~~~Q~~~G 311 (445)
T 3k11_A 237 ADRMFIPEK----GL-YRHGWVESSTDHPAFCWARANGWALLTACELLDVLPEDYPQRPKVMDYFRAHVRGVTALQSGEG 311 (445)
T ss_dssp HHHHEETTT----TE-ECSEEETTCSSCCCCCBHHHHHHHHHHHHHHHHHSCTTCTTHHHHHHHHHHHHHHHHTTCCTTS
T ss_pred HHhcccCCC----CC-EeeeecCCCCCCCcceecccchHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHhCCCCC
Confidence 223444321 11 12332221 2 24778888886 44445554 000000000 012333
Q ss_pred CcCCccccccCCCCCccc----hhHHHHHHHHHHHhhcccccchHHHHHHHHHhhhcccccC
Q 002940 389 FKSDPKRLASNLDSNTEE----SCTTYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLGIQR 446 (863)
Q Consensus 389 ~f~~p~~l~~~l~~~~~E----tCat~nmlkl~~~L~~~tgD~~YaD~~ERalyN~iLa~q~ 446 (863)
.|.. .+ +.+.++-| .+.+|+|++..+.-+ -....|.+..+|++ +++....+
T Consensus 312 ~W~~--vl--d~~~~y~EsSaTAmfaygllkgvr~G~--Ld~~~Y~~~A~ka~-~~L~~~i~ 366 (445)
T 3k11_A 312 FWHQ--LL--DCNDSYLETSATAIYVYCLAHAINKGW--IDAIAYGPVAQLGW-HAVAGKIN 366 (445)
T ss_dssp CEES--BT--TCTTSCEEHHHHHHHHHHHHHHHHHTS--SCHHHHHHHHHHHH-HHHHTTBC
T ss_pred chhh--cc--CCCCCCCCccHHHHHHHHHHHHHHcCC--CCHHHHHHHHHHHH-HHHHHhCC
Confidence 5542 11 11334444 555688888877533 22346999999876 67776554
No 11
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=98.68 E-value=1.3e-07 Score=104.58 Aligned_cols=168 Identities=11% Similarity=0.069 Sum_probs=105.8
Q ss_pred chHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHhcCCcccccCCchhhhhhhhcCCCccchhhHHHHHHHHHHHHHHc
Q 002940 183 GHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTYA 262 (863)
Q Consensus 183 GhyLsala~~ya~TgD~~lk~k~~~~Vd~L~~~Q~~~~dGYlga~p~~~~~r~~~l~~~W~pyYt~HKI~aGLld~Y~~t 262 (863)
++.+++++.+|..|+|+++++.+.+.+..+... .+|++ +..+.+.. .| +..+++++|+.|
T Consensus 49 a~~~~~l~d~~~~tgd~~y~~~a~~~~~~~~~~----~~~~~---~~~~~DD~-----a~--------~~la~~~aye~t 108 (349)
T 3k7x_A 49 AHLVEVRLDAYLRTKKQADLEVAEKTYLHNKNR----NGGTL---IHDFYDDM-----LW--------NALAAYRLYKAT 108 (349)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH----TTSSS---CCSBHHHH-----HH--------HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhc----CCCCC---CccCccHH-----HH--------HHHHHHHHHHHH
Confidence 344699999999999999999999988876542 22332 11111111 11 124677999999
Q ss_pred CCHhHHHHHHHHHHHH-HHHhhhhhccchhhhhhccc------cccccchHHHHHHHHHhcCCHHHHHHHhhccc---cc
Q 002940 263 DNAEALRMTTWMVEYF-YNRVQNVIKKYSIERHWQTL------NEEAGGMNDVLYKLFCITQDPKHLMLAHLFDK---PC 332 (863)
Q Consensus 263 Gn~~AL~va~~~ad~~-~~r~~~~~~~~~~~~~~~~l------~~E~GGmne~L~~LY~~TGd~ryL~lA~~f~~---~~ 332 (863)
|+++.|++|.++++++ ..++.+...+ .-.|..- .+.-|.+-.++++||++|||++|++.|++..+ ..
T Consensus 109 ~~~~yL~~A~~l~~~l~~~~wd~~~gG---Gi~W~~~~~~~knaisN~~~~~~la~l~~~tgd~~Yl~~A~~~~~w~~~~ 185 (349)
T 3k7x_A 109 GKSIYLEDAQLVWQDLVDTGWNDIMGG---GFAWRRPQMYYKNTPVNAPFIILSCWLYNELNETKYLEWAMKTYEWQTKV 185 (349)
T ss_dssp CCHHHHHHHHHHHHHHHHHTBCSGGGS---CBEEETTEEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHhCCCCCCCC---ceEecCCCccccchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhc
Confidence 9999999999999999 6776542211 1112211 01112344788999999999999999987532 22
Q ss_pred ccchhhccCCCCC----------CCcccCCCCeeehhhHHHHHhCCchhhc
Q 002940 333 FLGLLALQADDIS----------GFHSNTHIPIVIGSQMRYEVTGDQLHKE 373 (863)
Q Consensus 333 ~~~~la~~~D~l~----------~~HanthiP~~~G~A~~Y~~TGD~~yl~ 373 (863)
++++.-.-.|.+. ..++..+...+.|.+.+|++|||++|++
T Consensus 186 l~d~~g~v~Dg~~~~~~g~~~~~~~~tYnqg~~l~g~~~LY~~T~d~~yl~ 236 (349)
T 3k7x_A 186 LVREDGFVEDGINRLEDGTIDYEWKFTYNQGVYIGANLELYRITKEAIYLD 236 (349)
T ss_dssp HBCTTSCBCCEECTTSSSCBCTTCCCHHHHHHHHHHHHHHHHHHCCHHHHH
T ss_pred CCCCCCeEecCCccCCCCccCCcCeeeHHHHHHHHHHHHHHHhhCcHHHHH
Confidence 3332100001110 0111112234678899999999999998
No 12
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=98.53 E-value=1.3e-06 Score=96.94 Aligned_cols=243 Identities=10% Similarity=-0.032 Sum_probs=136.3
Q ss_pred ccchHHHHHHHHHHh-cCcHHHHHHHHHHHHHHHHH-HHhcCCcccccCCchhhhhhhhcCCCccchhhHHHHHHHHHHH
Q 002940 181 FVGHYLSASALMWAS-THNESLKEKMSAVVSALSAC-QKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQ 258 (863)
Q Consensus 181 ~~GhyLsala~~ya~-TgD~~lk~k~~~~Vd~L~~~-Q~~~~dGYlga~p~~~~~r~~~l~~~W~pyYt~HKI~aGLld~ 258 (863)
..+..+.+++.+|.. ++|+++++.++..++.|.+. +.. ..|+..+...+- +. .. .-...|..-.++.|+..+
T Consensus 54 ~nar~i~~~a~a~~~~~~~~~~~~~A~~~~~~l~~~~~~~-~Gg~~~~~d~dg--~~--~~-~~~~~~~~af~i~al~~~ 127 (388)
T 2gz6_A 54 LQNRQVWTFSMLCNQLEKRENWLKIARNGAKFLAQHGRDD-EGNWYFALTRGG--EP--LV-QPYNIFSDCFAAMAFSQY 127 (388)
T ss_dssp HHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHSBCT-TSCBCSEECTTS--CB--CC-CCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCCC-CCCEEEEEcCCC--Cc--cc-CCcchHHHHHHHHHHHHH
Confidence 456677888999998 89999999999999999887 442 345655442100 00 00 001112222255678889
Q ss_pred HHHcCCHhHHHHHHHHHHHHHHHhhhhhccchhhhhhcccccccc-----chHHHHHHHHHhcCCHHHHHHHhhccc---
Q 002940 259 YTYADNAEALRMTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAG-----GMNDVLYKLFCITQDPKHLMLAHLFDK--- 330 (863)
Q Consensus 259 Y~~tGn~~AL~va~~~ad~~~~r~~~~~~~~~~~~~~~~l~~E~G-----Gmne~L~~LY~~TGd~ryL~lA~~f~~--- 330 (863)
|++||++++|+.|.++++++.+++.+. .+...... .......| -+.+++..||++|||++|++.|+.+.+
T Consensus 128 y~~tg~~~~l~~A~~~~~~i~~~~~d~-~g~~~~~~-~~~~~~~~~~~~~~~~~all~l~~~t~d~~~~~~A~~~~~~~~ 205 (388)
T 2gz6_A 128 ALASGEEWAKDVAMQAYNNVLRRKDNP-KGKYTKTY-PGTRPMKALAVPMILANLTLEMEWLLPQETLENVLAATVQEVM 205 (388)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHTC----------------CCCCEETHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHhcCC-CcccCccc-CCCCCCCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 999999999999999999998765321 11110000 00000011 122678899999999999999987642
Q ss_pred ccccchhhcc-----CCCCCCCcccCCCC-eeeh--------hhHHHHHhCCchhhc----------cceec--cccCCC
Q 002940 331 PCFLGLLALQ-----ADDISGFHSNTHIP-IVIG--------SQMRYEVTGDQLHKE----------GHQLE--SSGTNI 384 (863)
Q Consensus 331 ~~~~~~la~~-----~D~l~~~HanthiP-~~~G--------~A~~Y~~TGD~~yl~----------~h~y~--tGG~s~ 384 (863)
..+.++.... .+.....- ..... ...| ..+.+++|||++|++ .+++- +||.-.
T Consensus 206 ~~~~~~~~g~~~e~~~~~w~~~~-~~~~~~~~pgh~~e~a~lL~~~~~~tgd~~~~~~A~~~~~~~~~~g~d~~~Gg~~~ 284 (388)
T 2gz6_A 206 GDFLDQEQGLMYENVAPDGSHID-CFEGRLINPGHGIEAMWFIMDIARRKNDSKTINQAVDVVLNILNFAWDNEYGGLYY 284 (388)
T ss_dssp HTTEETTTTEECSEECTTSCCCC-STTTTEECHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHBCTTTCSBCS
T ss_pred HHHhccCCCeEEEEECCCCCCCC-CcccCcCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhccCCCCCEEE
Confidence 1222221000 00000000 00001 1123 234478999999988 11111 133211
Q ss_pred CCCCCcCCc-cccccCCCCCccchhHHHHHHHHHHHhhcccccchHHHHHHHHH
Q 002940 385 GHFNFKSDP-KRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERSL 437 (863)
Q Consensus 385 ~E~~~f~~p-~~l~~~l~~~~~EtCat~nmlkl~~~L~~~tgD~~YaD~~ERal 437 (863)
+.+. +.....+.....-.+...+++.-+-.+++.|||.+|.+.++++.
T Consensus 285 -----~~~~~g~~~~~~~~~~~~~W~qae~i~a~~~ly~~tgd~~yl~~a~~~~ 333 (388)
T 2gz6_A 285 -----FMDAAGHPPQQLEWDQKLWWVHLESLVALAMGYRLTGRDACWAWYQKMH 333 (388)
T ss_dssp -----CEETTSCCCSCTTTTCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred -----eecCCCCccccCcCCCcCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 0000 00000111244456777888888888999999999999998864
No 13
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=98.45 E-value=2.6e-07 Score=102.92 Aligned_cols=229 Identities=14% Similarity=0.098 Sum_probs=136.2
Q ss_pred ccchHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHhcCCcccccCCchhhhhhhhcCCCccchhhHHHHHHHHHHHHH
Q 002940 181 FVGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYT 260 (863)
Q Consensus 181 ~~GhyLsala~~ya~TgD~~lk~k~~~~Vd~L~~~Q~~~~dGYlga~p~~~~~r~~~l~~~W~pyYt~HKI~aGLld~Y~ 260 (863)
+.|.++++++.+|..|+|+++++.+...++.+. + .+|.+. +.... ++ +.. +..++++.|+
T Consensus 42 ~~G~~~~gl~~~y~~tgd~~y~~~a~~~~~~~~---~--~~g~l~-~~~~~------lD-d~~-------~g~~ll~lY~ 101 (373)
T 1nc5_A 42 HQGVFLCGVLRLWEATGEKRYFEYAKAYADLLI---D--DNGNLL-FRRDE------LD-AIQ-------AGLILFPLYE 101 (373)
T ss_dssp HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHB---C--TTCCBC-CCTTC------GG-GTG-------GGGGHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh---C--CCCccc-CCCCC------cc-hHH-------HHHHHHHHHH
Confidence 378999999999999999999999999998764 2 456554 32111 11 111 2245678999
Q ss_pred HcCCHhHHHHHHHHHHHHHHHhhhhhccchh-h--hhhccccccccchH-HHHHHHHHhcCCHHHHHHHhhccc---ccc
Q 002940 261 YADNAEALRMTTWMVEYFYNRVQNVIKKYSI-E--RHWQTLNEEAGGMN-DVLYKLFCITQDPKHLMLAHLFDK---PCF 333 (863)
Q Consensus 261 ~tGn~~AL~va~~~ad~~~~r~~~~~~~~~~-~--~~~~~l~~E~GGmn-e~L~~LY~~TGd~ryL~lA~~f~~---~~~ 333 (863)
.||+++.++++..+++++..++...-.+... . ..+..+++-+ |+ +.|+++|++|||++|++.|.+..+ ..+
T Consensus 102 ~Tgd~~yl~~a~~la~~l~~~~r~~~G~fw~~~~~~~~~w~D~l~--m~~p~L~~l~~~tgd~~y~d~A~~~~~~~~~~l 179 (373)
T 1nc5_A 102 QTKDERYVKAAKRLRSLYGTLNRTSEGGFWHKDGYPYQMWLDGLY--MGGPFALKYANLKQETELFDQVVLQESLMRKHT 179 (373)
T ss_dssp HHCCHHHHHHHHHHHGGGGTSCBCTTSCBCSCTTSTTEEETHHHH--HHHHHHHHHHHHHTCTHHHHHHHHHHHHHHHHH
T ss_pred HhCCHHHHHHHHHHHHHHHhccCCCCCCeeccCCCCCeEEeCcHH--HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999996544211011100 0 0011122221 55 788999999999999999977432 223
Q ss_pred cchhhccCCCCCCCcccCC-------------CC---------eeehhhHHHHH-----hCCchhhc--cceeccccC-C
Q 002940 334 LGLLALQADDISGFHSNTH-------------IP---------IVIGSQMRYEV-----TGDQLHKE--GHQLESSGT-N 383 (863)
Q Consensus 334 ~~~la~~~D~l~~~Hanth-------------iP---------~~~G~A~~Y~~-----TGD~~yl~--~h~y~tGG~-s 383 (863)
+++. +.+ ..|..++ -| .++|.++.|++ ++++.|++ .++ +.+-. -
T Consensus 180 ~D~~----tGl-~~h~~~~~~~~~w~d~~tg~~~~~WaRg~gW~~~gl~~~l~~lp~~~~~~~~~~~~~~~~-a~~l~~~ 253 (373)
T 1nc5_A 180 KDAK----TGL-FYHAWDEAKKMPWANEETGCSPEFWARSIGWYVMSLADMIEELPKKHPNRHVWKNTLQDM-IKSICRY 253 (373)
T ss_dssp BCTT----TSC-BCSEEETTCCSTTSCTTTCBCSCCBHHHHHHHHHHHHHHGGGSCTTCHHHHHHHHHHHHH-HHHHHTT
T ss_pred cCCC----CCC-EEeecCCccccccccccCCCCCCcccchHhHHHHHHHHHHHhCCccchhHHHHHHHHHHH-HHHHHHh
Confidence 3331 111 1132221 12 24667788888 67777777 111 11000 0
Q ss_pred CC-CCCCcCCccccc-cCCCCCccc----hhHHHHHHHHHHHhhcccccchHHHHHHHHHhhhccc
Q 002940 384 IG-HFNFKSDPKRLA-SNLDSNTEE----SCTTYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLG 443 (863)
Q Consensus 384 ~~-E~~~f~~p~~l~-~~l~~~~~E----tCat~nmlkl~~~L~~~tgD~~YaD~~ERalyN~iLa 443 (863)
.+ |++.|.. .+. ...+.++-| .+.+|.|++..+.-+. |.+|.+.+||++ +++..
T Consensus 254 q~~~dG~W~~--~ld~~~~~~~~~EsSatA~~ay~l~~g~~~g~l---~~~Y~~~a~k~~-~~l~~ 313 (373)
T 1nc5_A 254 QDKETGLWYQ--IVDKGDRSDNWLESSGSCLYMYAIAKGINKGYL---DRAYETTLLKAY-QGLIQ 313 (373)
T ss_dssp SCTTTSCCBS--BTTCTTSTTCCBCHHHHHHHHHHHHHHHHHTSS---CGGGHHHHHHHH-HHHHH
T ss_pred cCCCCCceee--ecCCCCCCCCCccccHHHHHHHHHHHHHHCCCC---cHHHHHHHHHHH-HHHHH
Confidence 11 2334441 111 111233445 6777899988766332 468999999988 67665
No 14
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=98.16 E-value=1.5e-05 Score=89.41 Aligned_cols=240 Identities=10% Similarity=0.067 Sum_probs=142.3
Q ss_pred ccchHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHhcC-CcccccCCchhhhhhhhcCCCccchhhHHHHHHHHHHHH
Q 002940 181 FVGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIG-SGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQY 259 (863)
Q Consensus 181 ~~GhyLsala~~ya~TgD~~lk~k~~~~Vd~L~~~Q~~~~-dGYlga~p~~~~~r~~~l~~~W~pyYt~HKI~aGLld~Y 259 (863)
+.|..+.++|.+|..++++++++.++..++.|.+.-.... .||...+.+. +. . ..=...|..--++.|+++ |
T Consensus 53 ~n~r~i~~~a~a~~~~g~~~~l~~A~~~~~fl~~~~~d~~~Gg~~~~~~dG---~~--~-~~~~~lyd~Af~i~al~~-~ 125 (402)
T 3gt5_A 53 SSTRFVFNYAMAYLQFGTAEYLDAVHHGLSYVRDVHRNPATGGYAWTLCDD---RV--E-DDTNHCYGLAFVMLAYSC-G 125 (402)
T ss_dssp HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTBCTTTSCBCSEEETT---EE--E-ECCEEHHHHHHHHHHHHH-H
T ss_pred HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHhCccCCCCcEEEEeeCC---CC--C-cCCcchHHHHHHHHHHHH-H
Confidence 4678889999999999999999999999999876422112 4665444110 00 0 000123443446677877 7
Q ss_pred HHcCCHhHHHHHHHHHHHHHHHhhhhhcc-ch--hhhhhccccccccchH------HHHHHHHHhcCCHHHHHHHhhccc
Q 002940 260 TYADNAEALRMTTWMVEYFYNRVQNVIKK-YS--IERHWQTLNEEAGGMN------DVLYKLFCITQDPKHLMLAHLFDK 330 (863)
Q Consensus 260 ~~tGn~~AL~va~~~ad~~~~r~~~~~~~-~~--~~~~~~~l~~E~GGmn------e~L~~LY~~TGd~ryL~lA~~f~~ 330 (863)
..||++++|+.|.++.+++.+++.....+ .. ...-|. +.... ++| +++.+||++|||++|++.|+...+
T Consensus 126 ~~tgd~~~l~~A~~l~~~i~~~f~d~~~G~~~~~~~~~~~-~~~~~-~~n~~m~l~eall~L~~~tgd~~~~~~a~~l~~ 203 (402)
T 3gt5_A 126 LKVGIKQAREWMDETWCLLERHFWDAEYGLYKDEADAQWN-FTRYR-GQNANMHMCEAMLAAYEASGEQRYLERALVLAD 203 (402)
T ss_dssp HHTTCTTHHHHHHHHHHHHHHHTEETTTTEECCEECTTCC-BCSCE-EHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred HHhCChhHHHHHHHHHHHHHHHhcCCcCCCchhhhCCCCC-CCCCC-CCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHH
Confidence 78999999999999999999886431111 10 001111 11101 122 678999999999999999987543
Q ss_pred ---ccccchhhc----cC-CCCCC-CcccCCCC--------eeehh--------hHHHHHhCCchhhc----------cc
Q 002940 331 ---PCFLGLLAL----QA-DDISG-FHSNTHIP--------IVIGS--------QMRYEVTGDQLHKE----------GH 375 (863)
Q Consensus 331 ---~~~~~~la~----~~-D~l~~-~HanthiP--------~~~G~--------A~~Y~~TGD~~yl~----------~h 375 (863)
..|.++... .- +.... ...|..-| +-.|| ...++++|++.|++ .+
T Consensus 204 ~~~~~f~~~~~g~l~e~~~~dw~~~~~~~~~~~~~~~~~~~~~pGH~iE~awlLl~~~~~~~~~~~~~~A~~l~~~~~~~ 283 (402)
T 3gt5_A 204 RITRRQAAKADGLVWEHYDMRWEVDWDYNRDNPKHLFRPWGFQPGHQTEWAKLLLILDRYIEVEWLVPVARSLFDVAVAR 283 (402)
T ss_dssp HHHTHHHHTTTTSCCSEECTTSCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHCCCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHhhCccCCeeEEEECCCCCCccccccCCcccccCcCCCCCChHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHh
Confidence 222222100 00 00000 00011111 23465 33478899999988 12
Q ss_pred eec--cccCCCCCCCCcCCccccccCCCCCccchhHHHHHHHHHHHhhcccccchHHHHHHHHH
Q 002940 376 QLE--SSGTNIGHFNFKSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERSL 437 (863)
Q Consensus 376 ~y~--tGG~s~~E~~~f~~p~~l~~~l~~~~~EtCat~nmlkl~~~L~~~tgD~~YaD~~ERal 437 (863)
++- .||+-. +.+.+ +......-..+...+.|.-+-.|++.|||.+|.+.++++.
T Consensus 284 gwd~~~Gg~~~-----~~d~~---g~~~~~~k~~W~qaEal~a~l~ly~~tgd~~yl~~a~~~~ 339 (402)
T 3gt5_A 284 SWDAVRGGLCY-----GFAPD---GTICDDDKYFWVQAESLAAAALLATRSGDERYWQWYDRLW 339 (402)
T ss_dssp HBCTTTCSBCS-----EECTT---SCEEECCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred cccCCCCcEEE-----EEcCC---CCeeeCCcceeHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 211 244311 11111 1112456678888888988999999999999999998875
No 15
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=98.11 E-value=1.7e-05 Score=87.79 Aligned_cols=179 Identities=18% Similarity=0.194 Sum_probs=104.5
Q ss_pred CccchhhHHHHHHHHHHHHHHcCCHhHHHHHHHHHHHHHHHhhh-hhccchhhhhhccccccccchHHHHHHHHHhcCCH
Q 002940 241 VWAPYYTIHKILAGLLDQYTYADNAEALRMTTWMVEYFYNRVQN-VIKKYSIERHWQTLNEEAGGMNDVLYKLFCITQDP 319 (863)
Q Consensus 241 ~W~pyYt~HKI~aGLld~Y~~tGn~~AL~va~~~ad~~~~r~~~-~~~~~~~~~~~~~l~~E~GGmne~L~~LY~~TGd~ 319 (863)
.|--+++.|.+ .+|+++|++||+++.++++.+..+++..+-.. .+....++.-| +-.++..+|++|||+
T Consensus 42 ~~~yWW~a~~~-~~l~d~~~~tgd~~y~~~a~~~~~~~~~~~~~~~~~~~~DD~a~---------~~la~~~aye~t~~~ 111 (349)
T 3k7x_A 42 VFNYWWLAHLV-EVRLDAYLRTKKQADLEVAEKTYLHNKNRNGGTLIHDFYDDMLW---------NALAAYRLYKATGKS 111 (349)
T ss_dssp SCCHHHHHHHH-HHHHHHHHHHCCHHHHHHHHHHHHHHHHHTTSSSCCSBHHHHHH---------HHHHHHHHHHHHCCH
T ss_pred CCCccHHHHHH-HHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCCCCCccCccHHHH---------HHHHHHHHHHHHCCc
Confidence 34445578874 88999999999999999999999998765321 11122221111 236899999999999
Q ss_pred HHHHHHhhccc----ccccchhhccCCCCCCCcccC----------CCCeeehhhHHHHHhCCchhhc--ccee---ccc
Q 002940 320 KHLMLAHLFDK----PCFLGLLALQADDISGFHSNT----------HIPIVIGSQMRYEVTGDQLHKE--GHQL---ESS 380 (863)
Q Consensus 320 ryL~lA~~f~~----~~~~~~la~~~D~l~~~Hant----------hiP~~~G~A~~Y~~TGD~~yl~--~h~y---~tG 380 (863)
+||++|+.+.+ ..+.++.. .++..+. ..+.+...+++|++|||+.|++ .+++ ..+
T Consensus 112 ~yL~~A~~l~~~l~~~~wd~~~g------GGi~W~~~~~~~knaisN~~~~~~la~l~~~tgd~~Yl~~A~~~~~w~~~~ 185 (349)
T 3k7x_A 112 IYLEDAQLVWQDLVDTGWNDIMG------GGFAWRRPQMYYKNTPVNAPFIILSCWLYNELNETKYLEWAMKTYEWQTKV 185 (349)
T ss_dssp HHHHHHHHHHHHHHHHTBCSGGG------SCBEEETTEEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCCCCCC------CceEecCCCccccchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhc
Confidence 99999986432 22222111 1222111 1123456788899999999998 1110 011
Q ss_pred cCCCCCCCCcCCccccc--cCCCCCccchhHHHHHHHHHHHhhcccccchHHHHHHHHH
Q 002940 381 GTNIGHFNFKSDPKRLA--SNLDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERSL 437 (863)
Q Consensus 381 G~s~~E~~~f~~p~~l~--~~l~~~~~EtCat~nmlkl~~~L~~~tgD~~YaD~~ERal 437 (863)
-+. .+ ..+.+.-... +.......=|=+.--+|.-+-.|++.|+|++|.+..++++
T Consensus 186 l~d-~~-g~v~Dg~~~~~~g~~~~~~~~tYnqg~~l~g~~~LY~~T~d~~yl~~a~~l~ 242 (349)
T 3k7x_A 186 LVR-ED-GFVEDGINRLEDGTIDYEWKFTYNQGVYIGANLELYRITKEAIYLDTANKTA 242 (349)
T ss_dssp HBC-TT-SCBCCEECTTSSSCBCTTCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred CCC-CC-CeEecCCccCCCCccCCcCeeeHHHHHHHHHHHHHHHhhCcHHHHHHHHHHH
Confidence 110 01 0111110000 0011111112122236777788999999999999999876
No 16
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=97.92 E-value=2.3e-05 Score=86.78 Aligned_cols=182 Identities=9% Similarity=-0.062 Sum_probs=104.5
Q ss_pred cchHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHhcCCcccccCCchhhhhhhhcCCCccchhhHHHHHHHHHHHHHH
Q 002940 182 VGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTY 261 (863)
Q Consensus 182 ~GhyLsala~~ya~TgD~~lk~k~~~~Vd~L~~~Q~~~~dGYlga~p~~~~~r~~~l~~~W~pyYt~HKI~aGLld~Y~~ 261 (863)
-+.++.|++.+|..|+|+++++.+.++.+.+.+.... ++|++..... ..+..+ .+--..|.+ .++++.|++
T Consensus 117 ~af~i~al~~~y~~tg~~~~l~~A~~~~~~i~~~~~d-~~g~~~~~~~----~~~~~~---~~~~~~~~~-~all~l~~~ 187 (388)
T 2gz6_A 117 DCFAAMAFSQYALASGEEWAKDVAMQAYNNVLRRKDN-PKGKYTKTYP----GTRPMK---ALAVPMILA-NLTLEMEWL 187 (388)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTC-------------------CCCCE---ETHHHHHHH-HHHHHTGGG
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcC-CCcccCcccC----CCCCCC---CCCHHHHHH-HHHHHHHHH
Confidence 5678889999999999999999999999998876542 4566533211 000011 122234444 457789999
Q ss_pred cCCHhHHHHHHHHHHHHHHHhhhhhcc----chhhhhhcccc------ccccch---HHHHHHHHHhcCCHHHHHHHhhc
Q 002940 262 ADNAEALRMTTWMVEYFYNRVQNVIKK----YSIERHWQTLN------EEAGGM---NDVLYKLFCITQDPKHLMLAHLF 328 (863)
Q Consensus 262 tGn~~AL~va~~~ad~~~~r~~~~~~~----~~~~~~~~~l~------~E~GGm---ne~L~~LY~~TGd~ryL~lA~~f 328 (863)
||+++.++.|.++++.+.+++...-.+ .....| ..+. .+.|+. ...|.+++++|||++|++.|+..
T Consensus 188 t~d~~~~~~A~~~~~~~~~~~~~~~~g~~~e~~~~~w-~~~~~~~~~~~~pgh~~e~a~lL~~~~~~tgd~~~~~~A~~~ 266 (388)
T 2gz6_A 188 LPQETLENVLAATVQEVMGDFLDQEQGLMYENVAPDG-SHIDCFEGRLINPGHGIEAMWFIMDIARRKNDSKTINQAVDV 266 (388)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTEETTTTEECSEECTTS-CCCCSTTTTEECHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCCC-CCCCCcccCcCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 999999999999999998876421111 111112 1111 111211 14688999999999999999875
Q ss_pred cccc---ccchhhcc-CCCC--CCC-c---c-cC-----CCCeeehhhHHHHHhCCchhhc
Q 002940 329 DKPC---FLGLLALQ-ADDI--SGF-H---S-NT-----HIPIVIGSQMRYEVTGDQLHKE 373 (863)
Q Consensus 329 ~~~~---~~~~la~~-~D~l--~~~-H---a-nt-----hiP~~~G~A~~Y~~TGD~~yl~ 373 (863)
.+.. ..++...+ .+.+ .+. . . ++ |...+.|++..|++|||++|++
T Consensus 267 ~~~~~~~g~d~~~Gg~~~~~~~~g~~~~~~~~~~~~~W~qae~i~a~~~ly~~tgd~~yl~ 327 (388)
T 2gz6_A 267 VLNILNFAWDNEYGGLYYFMDAAGHPPQQLEWDQKLWWVHLESLVALAMGYRLTGRDACWA 327 (388)
T ss_dssp HHHHHHHHBCTTTCSBCSCEETTSCCCSCTTTTCEEHHHHHHHHHHHHHHHHHHCCHHHHH
T ss_pred HHHHHHHhccCCCCCEEEeecCCCCccccCcCCCcCcHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 4321 11111000 0000 000 0 0 00 1113577889999999999987
No 17
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=97.88 E-value=0.00014 Score=82.09 Aligned_cols=245 Identities=9% Similarity=0.077 Sum_probs=139.6
Q ss_pred ccchHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHh-cCCcccccCCchhhhhhhhcCCCccchhhHHHHHHHHHHHH
Q 002940 181 FVGHYLSASALMWASTHNESLKEKMSAVVSALSACQKE-IGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQY 259 (863)
Q Consensus 181 ~~GhyLsala~~ya~TgD~~lk~k~~~~Vd~L~~~Q~~-~~dGYlga~p~~~~~r~~~l~~~W~pyYt~HKI~aGLld~Y 259 (863)
..|--+.+.|.+|. ++++++++.++..++.|.+.-.. .+.||+.+... ..+... . ...|..=-++.++++ |
T Consensus 52 ~nar~i~~~a~a~~-~g~~~~l~~A~~~~~fl~~~~~D~~~GG~~~s~d~----dg~~~~-~-k~lyd~Af~i~al~~-~ 123 (421)
T 2zbl_A 52 ITARMLHVYSVAAS-MGRPGAYDLVDHGIKAMNGALRDKKYGGWYACVND----QGVVDA-S-KQGYQHFFALLGAAS-A 123 (421)
T ss_dssp HHHHHHHHHHHHHH-TTCTTHHHHHHHHHHHHTTTTBCTTTSSBCSEEET----TEEEEC-C-EEHHHHHHHHHHHHH-H
T ss_pred HHHHHHHHHHHHHH-cCChhHHHHHHHHHHHHHHhccCcCCCeEEEEeCC----CCCcCC-c-hhHHHHHHHHHHHHH-H
Confidence 45777788899987 99999999999999988765321 12467643311 000001 1 234444446667877 9
Q ss_pred HHcCCHhHHHHHHHHHHHHHHHhhhhhcc-ch--hhhhhccccc--cccc---hHHHHHHHHHhcCCHHHHHHHhhccc-
Q 002940 260 TYADNAEALRMTTWMVEYFYNRVQNVIKK-YS--IERHWQTLNE--EAGG---MNDVLYKLFCITQDPKHLMLAHLFDK- 330 (863)
Q Consensus 260 ~~tGn~~AL~va~~~ad~~~~r~~~~~~~-~~--~~~~~~~l~~--E~GG---mne~L~~LY~~TGd~ryL~lA~~f~~- 330 (863)
+.||++++++++....+++.+.+.....+ +. ..+-+..+.. ...+ +.++|.+||++|||++|++.|++..+
T Consensus 124 ~~tg~~~~l~~a~~~~~~l~~~~~d~~~Ggf~~~~d~d~~~~~~~~~~n~~m~~~~al~~l~~~tgd~~~~~~A~~~~~~ 203 (421)
T 2zbl_A 124 VTTGHPEARKLLDYTIEVIEKYFWSEEEQMCLESWDEAFSQTEDYRGGNANMHAVEAFLIVYDVTHDKKWLDRALRIASV 203 (421)
T ss_dssp HTTTCTTHHHHHHHHHHHHHHHTEETTTTEECCEECTTSCSBCSCEEHHHHHHHHHHHHHHHHTTCCTHHHHHHHHHHHH
T ss_pred HHhCCccHHHHHHHHHHHHHHHhccCCCCCeeeeecCCCCcccccCCCcHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Confidence 99999999999999999998876431111 10 0000111000 0001 24788999999999999988876432
Q ss_pred --ccccch----hhc-cCCC---CCCCc----ccCCCC--eeeh--------hhHHHHHh---CC--c-hhhc-------
Q 002940 331 --PCFLGL----LAL-QADD---ISGFH----SNTHIP--IVIG--------SQMRYEVT---GD--Q-LHKE------- 373 (863)
Q Consensus 331 --~~~~~~----la~-~~D~---l~~~H----anthiP--~~~G--------~A~~Y~~T---GD--~-~yl~------- 373 (863)
..+..+ +.. -.+. +.+.. .+...| +-.| ....|+++ || + .|++
T Consensus 204 ~~~~~~~~~~~~l~~~f~~~~~~~~~~~~dd~~~r~~~~~~~pgh~iE~~wlLl~~~~~~~~~~~~~~~~~l~~A~~l~~ 283 (421)
T 2zbl_A 204 IIHDVARNGDYRVNEHFDSQWNPIRDYNKDNPAHRFRAYGGTPGAWIEWGRLMLHLHAALEARFETPPAWLLEDAKGLFH 283 (421)
T ss_dssp HCCCCCGGGTTCCCCEECTTSCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHHHHTTCCCCTHHHHHHHHHHH
T ss_pred HHHHhccCCCCchhhhcCCccccchhccCCCcccccccCCCCCChHHHHHHHHHHHHHHcccccccchHHHHHHHHHHHH
Confidence 112111 000 0000 10000 000111 1134 34558898 66 5 7877
Q ss_pred ---cceec---cccCCCCCCCCcCCccccccCCCCCccchhHHHHHHHHHHHhhcccccchHHHHHHHHHhhhcc
Q 002940 374 ---GHQLE---SSGTNIGHFNFKSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERSLTNGVL 442 (863)
Q Consensus 374 ---~h~y~---tGG~s~~E~~~f~~p~~l~~~l~~~~~EtCat~nmlkl~~~L~~~tgD~~YaD~~ERalyN~iL 442 (863)
.+++- .||.- ++.++ .+.+.....+.+...+++.-+-.|++.|||.+|.+.+++++ +.+.
T Consensus 284 ~~~~~g~d~~~~GG~~-----~~~~~---~g~~~~~~k~~w~~aea~~all~l~~~tgd~~yl~~a~~~~-~~~~ 349 (421)
T 2zbl_A 284 ATIRDAWAPDGADGFV-----YSVDW---DGKPIVRERVRWPIVEAMGTAYALYTLTDDSQYEEWYQKWW-DYCI 349 (421)
T ss_dssp HHHHHHBSCSSSSSBC-----SCBCT---TSCBSCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH-HHHH
T ss_pred HHHHHhcCCCCCCcEE-----EeecC---CCCccCCCcccHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH-HHHH
Confidence 23331 13321 11111 11223456677778888888888999999999999999864 4443
No 18
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=97.84 E-value=0.00025 Score=79.26 Aligned_cols=234 Identities=11% Similarity=-0.025 Sum_probs=127.1
Q ss_pred cCcHHHHHHHHHHHHHHHHHHHhcCCcccc-cCCchhhhhhhhcCCCccchhhHHHHHHHHHHHHHHcCCHhHHHHHHHH
Q 002940 196 THNESLKEKMSAVVSALSACQKEIGSGYLS-AFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTYADNAEALRMTTWM 274 (863)
Q Consensus 196 TgD~~lk~k~~~~Vd~L~~~Q~~~~dGYlg-a~p~~~~~r~~~l~~~W~pyYt~HKI~aGLld~Y~~tGn~~AL~va~~~ 274 (863)
...++++++++.+++.|...++ .+|.+. .+|+..... ...-..|. |..+. .+.||..+|+.||+++.++.+.+.
T Consensus 22 ~~~~~~~~~l~~~~~~l~~~~~--~~~~f~~~~~~~~~~d-~k~~~~W~-Wt~G~-~~~gl~~~ye~Tgd~~y~~~a~~~ 96 (382)
T 3pmm_A 22 IARSELQALIRNVTQNLVNIKD--ESGQFLLRLDDGRVID-TKGWAGWE-WTHGV-GLYGIYQYYQQTGDIEMRDIIDRW 96 (382)
T ss_dssp SCHHHHHHHHHHHHHHHHHCCC--TTCTTCEECTTSCEEC-SSSTTSCS-HHHHH-HHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhccC--ccccccccCCcccccc-CCCCcCcc-ccHHH-HHHHHHHHHHHHCCHHHHHHHHHH
Confidence 3457899999999999977766 444432 222110000 00112221 12232 456788999999999999999987
Q ss_pred HHHHHHHhhhhhccchhhhhhccccccccchHHHHHHHHHhcCCHHHHHHHhhcccc---cccchhhccCCCCCCCccc-
Q 002940 275 VEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKP---CFLGLLALQADDISGFHSN- 350 (863)
Q Consensus 275 ad~~~~r~~~~~~~~~~~~~~~~l~~E~GGmne~L~~LY~~TGd~ryL~lA~~f~~~---~~~~~la~~~D~l~~~Han- 350 (863)
.+.+... +.+. .+-..+.+-.+|..||++|||++|++.|....+. .+......+ + .|..
T Consensus 97 ~~~~~~~------~~~~------~n~D~~~~~~~l~~lY~~Tgd~~Yl~~a~~~ad~L~~~~~r~~~Gg---f--~~~~~ 159 (382)
T 3pmm_A 97 FADRFAE------GATT------KNVNTMAPFLTLAYRFEETGRMAYLPWLESWAEWAMHEMPRTEQGG---M--QHMTL 159 (382)
T ss_dssp HHHHHHH------CCCC------CCTTTTTTHHHHHHHHHHHCCGGGHHHHHHHHHHHHHTSCBCGGGC---B--CCCCS
T ss_pred HHHHHcC------CCCc------CcccchHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhCCCCcCCC---e--eeecC
Confidence 7755321 1111 1111122335789999999999999998765431 111111110 0 1211
Q ss_pred ---CCCCe-----eeh---hhHHHHHhCCchhhc----------ccee--ccccCCCCCCCCcCCccccccC-C-C--CC
Q 002940 351 ---THIPI-----VIG---SQMRYEVTGDQLHKE----------GHQL--ESSGTNIGHFNFKSDPKRLASN-L-D--SN 403 (863)
Q Consensus 351 ---thiP~-----~~G---~A~~Y~~TGD~~yl~----------~h~y--~tGG~s~~E~~~f~~p~~l~~~-l-~--~~ 403 (863)
....+ .++ .+..|++|||++|++ ++.+ .||-. ++.-+..... . + =.
T Consensus 160 ~~~~~~~~WiDgl~M~~p~La~~~~~tgd~~y~d~A~~q~~~~~~~l~D~~tGl~-------~h~~~~~~~~~~~~~~Wa 232 (382)
T 3pmm_A 160 AEENHQQMWDDTLMMTVLPLAKIGKLLNRPQYVEEATYQFLLHVQNLMDRETGLW-------FHGWNYEGRHNFARARWA 232 (382)
T ss_dssp SCCCTTEEETTHHHHTHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHBCTTTSCB-------CSEEETTTTBCTTCCCBH
T ss_pred CCCCCCcEEecchhhhHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHccCCCCCCe-------eeeccCCCCCCCCcceec
Confidence 01111 122 466799999999988 2333 12211 1100000000 0 0 01
Q ss_pred ccchhHHHHHHHHHHHhh---cccccchHHHHHHHHHhhhcccccCCCCCCcEEEeccCCCC
Q 002940 404 TEESCTTYNMLKVSRHLF---RWTKEIAYADYYERSLTNGVLGIQRGTEPGVMIYLLPLAPG 462 (863)
Q Consensus 404 ~~EtCat~nmlkl~~~L~---~~tgD~~YaD~~ERalyN~iLa~q~~~~~g~~~Y~~PL~~g 462 (863)
..-.-..++|..+.+.|- ..+++.+|.+.+++.+ ++++..|+. .| +.+..+..|+
T Consensus 233 RG~gW~~~gl~~~l~~l~~p~~~~~~~~~~~~~~~~a-~~~~~~q~~--~G-~W~~~~d~~~ 290 (382)
T 3pmm_A 233 RGNSWLTMVIPDFLELVDLPEGNAVRRYLITVLDAQI-AALAECQDD--SG-LWHTLLDDPH 290 (382)
T ss_dssp HHHHHHHHHHHHHHHHHCCCTTCHHHHHHHHHHHHHH-HHHHHHCCT--TS-CEESBTTCTT
T ss_pred ccccHHHHHHHHHHHhhcCCcchhhHHHHHHHHHHHH-HHHHHcCCC--CC-ChhhccCCCC
Confidence 244567788888887751 2345677888887766 788888863 34 6665444443
No 19
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=97.52 E-value=0.00029 Score=78.94 Aligned_cols=183 Identities=10% Similarity=-0.006 Sum_probs=105.2
Q ss_pred chHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH-HhcCCcccccCCchhhhhhhhcCCCccchhhHHHHHHHHHHHHHH
Q 002940 183 GHYLSASALMWASTHNESLKEKMSAVVSALSACQ-KEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTY 261 (863)
Q Consensus 183 GhyLsala~~ya~TgD~~lk~k~~~~Vd~L~~~Q-~~~~dGYlga~p~~~~~r~~~l~~~W~pyYt~HKI~aGLld~Y~~ 261 (863)
.+.+-|++. |..|+|++.++++..+.+.+.+.- +..+.||...+... +. + ...-.+.-.+|.+.+ ++..|++
T Consensus 116 Af~i~al~~-~~~tgd~~~l~~A~~l~~~i~~~f~d~~~G~~~~~~~~~-~~-~---~~~~~~n~~m~l~ea-ll~L~~~ 188 (402)
T 3gt5_A 116 AFVMLAYSC-GLKVGIKQAREWMDETWCLLERHFWDAEYGLYKDEADAQ-WN-F---TRYRGQNANMHMCEA-MLAAYEA 188 (402)
T ss_dssp HHHHHHHHH-HHHTTCTTHHHHHHHHHHHHHHHTEETTTTEECCEECTT-CC-B---CSCEEHHHHHHHHHH-HHHHHHH
T ss_pred HHHHHHHHH-HHHhCChhHHHHHHHHHHHHHHHhcCCcCCCchhhhCCC-CC-C---CCCCCCCHHHHHHHH-HHHHHHh
Confidence 345567777 667999999999999999887763 22234555333211 11 1 110112224555555 6689999
Q ss_pred cCCHhHHHHHHHHHHHHHHHhhhh----hccchhhhhhcccc--------------ccccchH---HHHHHHHHhcCCHH
Q 002940 262 ADNAEALRMTTWMVEYFYNRVQNV----IKKYSIERHWQTLN--------------EEAGGMN---DVLYKLFCITQDPK 320 (863)
Q Consensus 262 tGn~~AL~va~~~ad~~~~r~~~~----~~~~~~~~~~~~l~--------------~E~GGmn---e~L~~LY~~TGd~r 320 (863)
||+++.++.+.++++.+..++... +.......|..... .+.|-+- ..|.+++++||+++
T Consensus 189 tgd~~~~~~a~~l~~~~~~~f~~~~~g~l~e~~~~dw~~~~~~~~~~~~~~~~~~~~~pGH~iE~awlLl~~~~~~~~~~ 268 (402)
T 3gt5_A 189 SGEQRYLERALVLADRITRRQAAKADGLVWEHYDMRWEVDWDYNRDNPKHLFRPWGFQPGHQTEWAKLLLILDRYIEVEW 268 (402)
T ss_dssp HCCHHHHHHHHHHHHHHHTHHHHTTTTSCCSEECTTSCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHCCCTT
T ss_pred hCCHHHHHHHHHHHHHHHHHhhCccCCeeEEEECCCCCCccccccCCcccccCcCCCCCChHHHHHHHHHHHHHhhCcHH
Confidence 999999999999999998765321 11111112211100 1223222 35788999999999
Q ss_pred HHHHHhhccccc---ccchhhcc----CCCCCCCccc------CCCCeeehhhHHHHHhCCchhhc
Q 002940 321 HLMLAHLFDKPC---FLGLLALQ----ADDISGFHSN------THIPIVIGSQMRYEVTGDQLHKE 373 (863)
Q Consensus 321 yL~lA~~f~~~~---~~~~la~~----~D~l~~~Han------thiP~~~G~A~~Y~~TGD~~yl~ 373 (863)
|++.|+.+.+.. ..++...+ .|. .+.-.. .|...++|++.+|+.|||++|++
T Consensus 269 ~~~~A~~l~~~~~~~gwd~~~Gg~~~~~d~-~g~~~~~~k~~W~qaEal~a~l~ly~~tgd~~yl~ 333 (402)
T 3gt5_A 269 LVPVARSLFDVAVARSWDAVRGGLCYGFAP-DGTICDDDKYFWVQAESLAAAALLATRSGDERYWQ 333 (402)
T ss_dssp HHHHHHHHHHHHHHHHBCTTTCSBCSEECT-TSCEEECCEEHHHHHHHHHHHHHHHHHHCCHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCCCCcEEEEEcC-CCCeeeCCcceeHHHHHHHHHHHHHHHhCCHHHHH
Confidence 999998864321 12211000 000 000000 01112567888999999999988
No 20
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=97.45 E-value=0.00095 Score=74.33 Aligned_cols=248 Identities=8% Similarity=-0.064 Sum_probs=135.2
Q ss_pred cchHHHHHHHHHHhc---CcHHHHHHHHHHHHHHHHHH-HhcCC-cccccCCchhhhhhhhcCCCccchhhHHHHHHHHH
Q 002940 182 VGHYLSASALMWAST---HNESLKEKMSAVVSALSACQ-KEIGS-GYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLL 256 (863)
Q Consensus 182 ~GhyLsala~~ya~T---gD~~lk~k~~~~Vd~L~~~Q-~~~~d-GYlga~p~~~~~r~~~l~~~W~pyYt~HKI~aGLl 256 (863)
.+..|.+.|.+|..+ +++++++.++..++.|.+.- +..+. ||....... .+.. +.-...|..=-+..+++
T Consensus 58 nar~l~~~a~a~~~~~~~~~~~~l~~A~~~~~fl~~~~~d~~gg~g~~~s~d~d----g~~~-~~~~~lyd~af~~~a~~ 132 (402)
T 1fp3_A 58 QGRQVWMYCRLYRKLERFHRPELLDAAKAGGEFLLRHARVAPPEKKCAFVLTRD----GRPV-KVQRSIFSECFYTMAMN 132 (402)
T ss_dssp HHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHTBSSTTSCCBCSEECTT----SCEE-ECCSSSHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHhccCcCCCCceEEEECCC----CCcc-ccccchHHHHHHHHHHH
Confidence 344467788888876 99999999999999998873 31123 676443210 0000 00011222222556788
Q ss_pred HHHHHcCCHhHHHHHHHHHHHHHHHhh-hhhccchhhh--hhccccccccc-hH--HHHHH---HHHhcCCHHHHHHHhh
Q 002940 257 DQYTYADNAEALRMTTWMVEYFYNRVQ-NVIKKYSIER--HWQTLNEEAGG-MN--DVLYK---LFCITQDPKHLMLAHL 327 (863)
Q Consensus 257 d~Y~~tGn~~AL~va~~~ad~~~~r~~-~~~~~~~~~~--~~~~l~~E~GG-mn--e~L~~---LY~~TGd~ryL~lA~~ 327 (863)
++|+.||+++++++|.++.+++.+.+. .. .+..... -+.... ..++ |. +++.. ||.+|+++ |++.|+.
T Consensus 133 ~~~~atgd~~~~~~A~~l~~~~~~~~~d~~-~G~f~~~~~~~~~~~-~~~~~m~~~~~~l~l~~l~~~~~~~-~~~~a~~ 209 (402)
T 1fp3_A 133 ELWRVTAEARYQSEAVDMMDQIVHWVREDP-SGLGRPQLPGAVASE-SMAVPMMLLCLVEQLGEEDEELAGR-YAQLGHW 209 (402)
T ss_dssp HHHHHHCCHHHHHHHHHHHHHHHHHHHTCG-GGGCCCCCTTSCCEE-ETHHHHHHHHHHHHHHTTCHHHHHH-THHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHhccCC-CcccCccccCccCCC-CcchHHHHHHHHHHHHHHHHhcCcH-HHHHHHH
Confidence 999999999999999999999988764 21 1111000 011000 0011 12 34555 77888665 8877776
Q ss_pred ccc---ccccchhhc----cCC-CCCCCcccCC-CCeeeh--------hhHHHHHhCCchhhc------cce-ecc----
Q 002940 328 FDK---PCFLGLLAL----QAD-DISGFHSNTH-IPIVIG--------SQMRYEVTGDQLHKE------GHQ-LES---- 379 (863)
Q Consensus 328 f~~---~~~~~~la~----~~D-~l~~~Hanth-iP~~~G--------~A~~Y~~TGD~~yl~------~h~-y~t---- 379 (863)
..+ .. +.+... ..| ..... .+.. -++-.| .+..|+++||+.|++ ..+ ...
T Consensus 210 ~~~~~~~~-~~~~~~~~~e~~d~dw~~~-~~~~g~~~~pgh~ie~~wlL~~a~~~~~~~~~l~~A~~~~~~~~~~~~~d~ 287 (402)
T 1fp3_A 210 CARRILQH-VQRDGQAVLENVSEDGEEL-SGCLGRHQNPGHALEAGWFLLRHSSRSGDAKLRAHVIDTFLLLPFRSGWDA 287 (402)
T ss_dssp HHHHHHTT-EETTTTEECSEEETTSCBC-CHHHHHEECHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTHHHHHHHBCT
T ss_pred HHHHHHHH-hCcCCCeEEEEECCCCCcc-CCCCCCCCCCCcHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHhccC
Confidence 432 11 222100 000 00000 0000 012234 344488999999988 222 222
Q ss_pred --ccCCCCCCCCcCCccccccCCCCCccchhHHHHHHHHHHHhhcccccchHHHHHHHHHhhhcccc
Q 002940 380 --SGTNIGHFNFKSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLGI 444 (863)
Q Consensus 380 --GG~s~~E~~~f~~p~~l~~~l~~~~~EtCat~nmlkl~~~L~~~tgD~~YaD~~ERalyN~iLa~ 444 (863)
||.--. .. ..+.....+.+.....+...+++.-+-.|++.|||.+|.+.++++. +-+...
T Consensus 288 ~~gg~~~~---~~-~~g~~~~~l~d~~~~~W~qaea~~a~l~ly~~tgd~~yl~~a~~~~-~~~~~~ 349 (402)
T 1fp3_A 288 DHGGLFYF---QD-ADGLCPTQLEWAMKLWWPHSEAMIAFLMGYSESGDPALLRLFYQVA-EYTFRQ 349 (402)
T ss_dssp TTCSBCSC---EE-TTSCCCSSTTTTCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH-HHHHHH
T ss_pred CCCCEEEe---ec-CCCCccccCcCCCcCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH-HHHHHh
Confidence 222110 00 0111112233455566888888888889999999999999888853 444444
No 21
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=96.88 E-value=0.0019 Score=72.71 Aligned_cols=182 Identities=11% Similarity=0.018 Sum_probs=103.4
Q ss_pred hHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHhc-CCcccccCCchhhhhhhhcCCCccchhhHHHHHHHHHHHHHHc
Q 002940 184 HYLSASALMWASTHNESLKEKMSAVVSALSACQKEI-GSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTYA 262 (863)
Q Consensus 184 hyLsala~~ya~TgD~~lk~k~~~~Vd~L~~~Q~~~-~dGYlga~p~~~~~r~~~l~~~W~pyYt~HKI~aGLld~Y~~t 262 (863)
..+.|++. |..|+|++.++.++.+++.+.+.=... ..||..+.+... +..+ ....|.+ .+|.+. +++..|+++
T Consensus 115 f~i~al~~-~~~tg~~~~l~~a~~~~~~l~~~~~d~~~Ggf~~~~d~d~-~~~~-~~~~~n~--~m~~~~-al~~l~~~t 188 (421)
T 2zbl_A 115 FALLGAAS-AVTTGHPEARKLLDYTIEVIEKYFWSEEEQMCLESWDEAF-SQTE-DYRGGNA--NMHAVE-AFLIVYDVT 188 (421)
T ss_dssp HHHHHHHH-HHTTTCTTHHHHHHHHHHHHHHHTEETTTTEECCEECTTS-CSBC-SCEEHHH--HHHHHH-HHHHHHHTT
T ss_pred HHHHHHHH-HHHhCCccHHHHHHHHHHHHHHHhccCCCCCeeeeecCCC-Cccc-ccCCCcH--HHHHHH-HHHHHHHhh
Confidence 45567777 899999999999999998887643211 346766554210 0011 0111221 234454 466899999
Q ss_pred CCHhHHHHHHHHHHHHHHHhhhh----hccchhhhhhcccc----c----------cccc-hH--HHHHHHHHhc---CC
Q 002940 263 DNAEALRMTTWMVEYFYNRVQNV----IKKYSIERHWQTLN----E----------EAGG-MN--DVLYKLFCIT---QD 318 (863)
Q Consensus 263 Gn~~AL~va~~~ad~~~~r~~~~----~~~~~~~~~~~~l~----~----------E~GG-mn--e~L~~LY~~T---Gd 318 (863)
|+++.++.|.++++.+..++.+. +.......|..... . +.|= ++ ..|.++|+.| ||
T Consensus 189 gd~~~~~~A~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~dd~~~r~~~~~~~pgh~iE~~wlLl~~~~~~~~~~~ 268 (421)
T 2zbl_A 189 HDKKWLDRALRIASVIIHDVARNGDYRVNEHFDSQWNPIRDYNKDNPAHRFRAYGGTPGAWIEWGRLMLHLHAALEARFE 268 (421)
T ss_dssp CCTHHHHHHHHHHHHHCCCCCGGGTTCCCCEECTTSCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHHHHhccCCCCchhhhcCCccccchhccCCCcccccccCCCCCChHHHHHHHHHHHHHHcccccc
Confidence 99999999999999987654321 11111111111111 0 1221 22 4678999999 66
Q ss_pred --H-HHHHHHhhcccc---cccchh-hccCCCCCCCcccCCCC-----------eeehhhHHHHHhCCchhhc
Q 002940 319 --P-KHLMLAHLFDKP---CFLGLL-ALQADDISGFHSNTHIP-----------IVIGSQMRYEVTGDQLHKE 373 (863)
Q Consensus 319 --~-ryL~lA~~f~~~---~~~~~l-a~~~D~l~~~HanthiP-----------~~~G~A~~Y~~TGD~~yl~ 373 (863)
+ +|++.|+.+.+. .+.++. ..+ .+.........+ .+.+.+.+|++|||++|++
T Consensus 269 ~~~~~~l~~A~~l~~~~~~~g~d~~~~GG--~~~~~~~~g~~~~~~k~~w~~aea~~all~l~~~tgd~~yl~ 339 (421)
T 2zbl_A 269 TPPAWLLEDAKGLFHATIRDAWAPDGADG--FVYSVDWDGKPIVRERVRWPIVEAMGTAYALYTLTDDSQYEE 339 (421)
T ss_dssp CCCTHHHHHHHHHHHHHHHHHBSCSSSSS--BCSCBCTTSCBSCCCEEHHHHHHHHHHHHHHHHHHCCHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHhcCCCCCCc--EEEeecCCCCccCCCcccHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 5 899999775432 122211 000 000000001111 2467888999999999987
No 22
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=96.85 E-value=0.0039 Score=69.21 Aligned_cols=166 Identities=10% Similarity=-0.043 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHHHHHhhhhhccchhhhhhccccccccchHHHHHHHHHhcCCHHHHHHHhhcccccccchhhccCCCCC-
Q 002940 267 ALRMTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQADDIS- 345 (863)
Q Consensus 267 AL~va~~~ad~~~~r~~~~~~~~~~~~~~~~l~~E~GGmne~L~~LY~~TGd~ryL~lA~~f~~~~~~~~la~~~D~l~- 345 (863)
....+.+|+|++.++..+.... ....| +-+.|-|-.+|..+|++|||++|++.|+...+..+ .+ .+ .+.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~-~~~~W----~w~~G~~~~gl~~~y~~tgd~~y~~~a~~~~~~~~-~~--~g--~l~~ 82 (373)
T 1nc5_A 13 PLTYAEALANTIMNTYTVEELP-PANRW----HYHQGVFLCGVLRLWEATGEKRYFEYAKAYADLLI-DD--NG--NLLF 82 (373)
T ss_dssp HHHHHHHHHHHHHHHCCTTTSS-STTCC----CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHB-CT--TC--CBCC
T ss_pred hHHHHHHHHHHHHHhCCCcccC-CCCCc----chhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh-CC--CC--cccC
Confidence 4578899999999876532110 01112 11345566899999999999999999987654211 11 00 110
Q ss_pred -CCcccCCCCeeehhhHHHHHhCCchhhc-----cceeccccCCCCCCCCcCCccccccCCCCCccchhHH-HHHHHHHH
Q 002940 346 -GFHSNTHIPIVIGSQMRYEVTGDQLHKE-----GHQLESSGTNIGHFNFKSDPKRLASNLDSNTEESCTT-YNMLKVSR 418 (863)
Q Consensus 346 -~~HanthiP~~~G~A~~Y~~TGD~~yl~-----~h~y~tGG~s~~E~~~f~~p~~l~~~l~~~~~EtCat-~nmlkl~~ 418 (863)
..+.. +.....+...+|+.|||++|++ .... ..-.-..+-.+|..+ ......-|-. +=.+-+.-
T Consensus 83 ~~~~lD-d~~~g~~ll~lY~~Tgd~~yl~~a~~la~~l-~~~~r~~~G~fw~~~-------~~~~~~w~D~l~m~~p~L~ 153 (373)
T 1nc5_A 83 RRDELD-AIQAGLILFPLYEQTKDERYVKAAKRLRSLY-GTLNRTSEGGFWHKD-------GYPYQMWLDGLYMGGPFAL 153 (373)
T ss_dssp CTTCGG-GTGGGGGHHHHHHHHCCHHHHHHHHHHHGGG-GTSCBCTTSCBCSCT-------TSTTEEETHHHHHHHHHHH
T ss_pred CCCCcc-hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH-HhccCCCCCCeeccC-------CCCCeEEeCcHHHHHHHHH
Confidence 00111 2224456778899999999988 1111 111101011134321 1112222333 22244556
Q ss_pred HhhcccccchHHHHHHHHHhhhcccccCCCCCCc
Q 002940 419 HLFRWTKEIAYADYYERSLTNGVLGIQRGTEPGV 452 (863)
Q Consensus 419 ~L~~~tgD~~YaD~~ERalyN~iLa~q~~~~~g~ 452 (863)
++.++|||++|.|.+++.+-...---.++ +.|.
T Consensus 154 ~l~~~tgd~~y~d~A~~~~~~~~~~l~D~-~tGl 186 (373)
T 1nc5_A 154 KYANLKQETELFDQVVLQESLMRKHTKDA-KTGL 186 (373)
T ss_dssp HHHHHHTCTHHHHHHHHHHHHHHHHHBCT-TTSC
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHhcCC-CCCC
Confidence 67899999999999999775554333444 4453
No 23
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=96.82 E-value=0.012 Score=66.89 Aligned_cols=235 Identities=11% Similarity=0.073 Sum_probs=126.7
Q ss_pred hcCcHHHHHHHHHHHHHHHH-----HHHh-cCCccccc--CCchhhhhhhhcC-CCccchhhHHHHHHHHHHHHHHcCCH
Q 002940 195 STHNESLKEKMSAVVSALSA-----CQKE-IGSGYLSA--FPTEQFDRLEALI-PVWAPYYTIHKILAGLLDQYTYADNA 265 (863)
Q Consensus 195 ~TgD~~lk~k~~~~Vd~L~~-----~Q~~-~~dGYlga--~p~~~~~r~~~l~-~~W~pyYt~HKI~aGLld~Y~~tGn~ 265 (863)
....+++++.++.+++.|.+ .-.+ .+.=+++- .+... .+.... ..|. |+.=.++.||..+|+.||++
T Consensus 26 ~~~~~~i~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--y~~Gv~l~gl~~ay~~Tgd~ 101 (445)
T 3k11_A 26 DLTPEQVKKDIDRVFAYIDKETPARVVDKNTGKVITDYTAMGDEA--QLERGAFRLAS--YEWGVTYSALIAAAETTGDK 101 (445)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTSCCCEEETTTCCEECCTTTCCTTE--EECCCSSCTTS--HHHHHHHHHHHHHHHHHCCH
T ss_pred cCCHHHHHHHHHHHHHHHhccCcceeecCCCCceecccccccccc--ccccCCcccCc--cCHHHHHHHHHHHHHHHCCH
Confidence 34567899999999998876 1111 01111110 11100 000011 1111 23334668899999999999
Q ss_pred hHHHHHHHHHHHHHHHhh---hhhc--cchhhhh-----hccccccccchHHHHHHHHHhcCCHHHHHHHhhcccc---c
Q 002940 266 EALRMTTWMVEYFYNRVQ---NVIK--KYSIERH-----WQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKP---C 332 (863)
Q Consensus 266 ~AL~va~~~ad~~~~r~~---~~~~--~~~~~~~-----~~~l~~E~GGmne~L~~LY~~TGd~ryL~lA~~f~~~---~ 332 (863)
+.++.+.+.++++.+.+. .+.. +....++ -..++. .|.|...|+++|+.|+|++|++.|....+. .
T Consensus 102 kY~~ya~~~~dfi~~~~p~~~~~~~~~G~l~~~~r~~~~~~~LDD-~g~~~~~Li~lY~~T~d~~yl~~a~~~ad~L~~~ 180 (445)
T 3k11_A 102 RYTDYVQNRFRFLAEVAPHFKRVYEEKGKTDSQLLQILTPHALDD-AGAVCTAMIKLRLKDESLPVDGLIQNYFDFIINK 180 (445)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHSCCSGGG-THHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhccchhhhhhhccCCeecccccccCCCcchh-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHc
Confidence 999999999998765321 0100 0000000 011222 355668899999999999999998764321 1
Q ss_pred ccchhhccCCCCCC-CcccCCCC-e-----eeh---hhHHHHHhCCch--hhc----------ccee--cccc-------
Q 002940 333 FLGLLALQADDISG-FHSNTHIP-I-----VIG---SQMRYEVTGDQL--HKE----------GHQL--ESSG------- 381 (863)
Q Consensus 333 ~~~~la~~~D~l~~-~HanthiP-~-----~~G---~A~~Y~~TGD~~--yl~----------~h~y--~tGG------- 381 (863)
+.. ..-.+ .|...... + .++ .+..+++|||++ |++ ++++ .||-
T Consensus 181 ~pR------t~~Ggf~h~~~~~~q~WiD~lyM~~pfla~~~~~tgd~~~~y~d~A~~q~~~~~~~l~D~~tGL~~Hg~~~ 254 (445)
T 3k11_A 181 EYR------LADGTFARNRPQRNTLWLDDMFMGIPAVAQMSRYDKEAKNKYLAEAVKQFLQFADRMFIPEKGLYRHGWVE 254 (445)
T ss_dssp SCB------CTTCCBCBCSSSTTEEETHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHEETTTTEECSEEET
T ss_pred CCC------CCCCceeecCCCCCceEecchhhHHHHHHHHHHHHCCcchHHHHHHHHHHHHHHHhcccCCCCCEeeeecC
Confidence 111 00111 23221111 1 133 355688999999 887 2222 1111
Q ss_pred ---CCCCCCCCcCCccccccCCCCCccchhHHHHHHHHHHHhhc-ccccchHHHHHHHHHhhhcccccCCCCCCcEEEec
Q 002940 382 ---TNIGHFNFKSDPKRLASNLDSNTEESCTTYNMLKVSRHLFR-WTKEIAYADYYERSLTNGVLGIQRGTEPGVMIYLL 457 (863)
Q Consensus 382 ---~s~~E~~~f~~p~~l~~~l~~~~~EtCat~nmlkl~~~L~~-~tgD~~YaD~~ERalyN~iLa~q~~~~~g~~~Y~~ 457 (863)
.+... +|. ..-.-..++|..+.+.|-. .++...|.+.+++.+ ++++..|+. .| +++..
T Consensus 255 ~~~~~~~~--~Wa------------RGnGW~~~gl~~~l~~lp~~~~~r~~l~~~~~~~a-~~l~~~Q~~--~G-~W~~v 316 (445)
T 3k11_A 255 SSTDHPAF--CWA------------RANGWALLTACELLDVLPEDYPQRPKVMDYFRAHV-RGVTALQSG--EG-FWHQL 316 (445)
T ss_dssp TCSSCCCC--CBH------------HHHHHHHHHHHHHHHHSCTTCTTHHHHHHHHHHHH-HHHHTTCCT--TS-CEESB
T ss_pred CCCCCCcc--eec------------ccchHHHHHHHHHHHhcccccccHHHHHHHHHHHH-HHHHHhCCC--CC-chhhc
Confidence 11111 221 2345677788887777643 345567777777766 888888863 34 56543
Q ss_pred c
Q 002940 458 P 458 (863)
Q Consensus 458 P 458 (863)
+
T Consensus 317 l 317 (445)
T 3k11_A 317 L 317 (445)
T ss_dssp T
T ss_pred c
Confidence 3
No 24
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=96.66 E-value=0.0034 Score=69.80 Aligned_cols=176 Identities=14% Similarity=0.081 Sum_probs=98.3
Q ss_pred chHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHhcCCcccccCCchhhhhhhhcCCCccchhhHHHHHHHHHH---HH
Q 002940 183 GHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLD---QY 259 (863)
Q Consensus 183 GhyLsala~~ya~TgD~~lk~k~~~~Vd~L~~~Q~~~~dGYlga~p~~~~~r~~~l~~~W~pyYt~HKI~aGLld---~Y 259 (863)
..++-|++.+|..|+|++.++.+..+++.+.+.-...+.|++.+.... +...+. + -.++|.+.+ ++. .|
T Consensus 125 af~~~a~~~~~~atgd~~~~~~A~~l~~~~~~~~~d~~~G~f~~~~~~----~~~~~~-~--~~~m~~~~~-~l~l~~l~ 196 (402)
T 1fp3_A 125 CFYTMAMNELWRVTAEARYQSEAVDMMDQIVHWVREDPSGLGRPQLPG----AVASES-M--AVPMMLLCL-VEQLGEED 196 (402)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHTCGGGGCCCCCTT----SCCEEE-T--HHHHHHHHH-HHHHHTTC
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhccCCCcccCccccC----ccCCCC-c--chHHHHHHH-HHHHHHHH
Confidence 477889999999999999999999999988876531256776433211 111110 0 111244333 334 45
Q ss_pred HHcCCHhHHHHHHHHHHHHHHHhhh---hhccchhhhhhccc-c-----cccc-chH--HHHHHHHHhcCCHHHHHHHhh
Q 002940 260 TYADNAEALRMTTWMVEYFYNRVQN---VIKKYSIERHWQTL-N-----EEAG-GMN--DVLYKLFCITQDPKHLMLAHL 327 (863)
Q Consensus 260 ~~tGn~~AL~va~~~ad~~~~r~~~---~~~~~~~~~~~~~l-~-----~E~G-Gmn--e~L~~LY~~TGd~ryL~lA~~ 327 (863)
..+++ +.++.+.++.+.+..++.. .+....+..| ... + .+.| .++ ..|+++++++||++|++.|+.
T Consensus 197 ~~~~~-~~~~~a~~~~~~~~~~~~~~~~~~~e~~d~dw-~~~~~~~g~~~~pgh~ie~~wlL~~a~~~~~~~~~l~~A~~ 274 (402)
T 1fp3_A 197 EELAG-RYAQLGHWCARRILQHVQRDGQAVLENVSEDG-EELSGCLGRHQNPGHALEAGWFLLRHSSRSGDAKLRAHVID 274 (402)
T ss_dssp HHHHH-HTHHHHHHHHHHHHTTEETTTTEECSEEETTS-CBCCHHHHHEECHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HhcCc-HHHHHHHHHHHHHHHHhCcCCCeEEEEECCCC-CccCCCCCCCCCCCcHHHHHHHHHHHHHHcCChHHHHHHHH
Confidence 66644 3677888877777654211 0111111111 110 0 1111 122 268899999999999999977
Q ss_pred ccccc----ccchhhccCCCCCCCcc---cCCCC---------------eeehhhHHHHHhCCchhhc
Q 002940 328 FDKPC----FLGLLALQADDISGFHS---NTHIP---------------IVIGSQMRYEVTGDQLHKE 373 (863)
Q Consensus 328 f~~~~----~~~~la~~~D~l~~~Ha---nthiP---------------~~~G~A~~Y~~TGD~~yl~ 373 (863)
..+.. ..++.. ..+ .|. ..+.+ .+.|++.+|++|||++|++
T Consensus 275 ~~~~~~~~~~~d~~~---gg~--~~~~~~~g~~~~~l~d~~~~~W~qaea~~a~l~ly~~tgd~~yl~ 337 (402)
T 1fp3_A 275 TFLLLPFRSGWDADH---GGL--FYFQDADGLCPTQLEWAMKLWWPHSEAMIAFLMGYSESGDPALLR 337 (402)
T ss_dssp HHTHHHHHHHBCTTT---CSB--CSCEETTSCCCSSTTTTCEEHHHHHHHHHHHHHHHHHHCCHHHHH
T ss_pred HHHHHHHHHhccCCC---CCE--EEeecCCCCccccCcCCCcCcHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 54322 111100 001 111 11111 1578889999999999988
No 25
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=96.52 E-value=0.0084 Score=67.31 Aligned_cols=140 Identities=16% Similarity=0.113 Sum_probs=91.7
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHhcCCcccccCCchhhh----h------hhh--cCCCccchhhHHHHHH
Q 002940 186 LSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFD----R------LEA--LIPVWAPYYTIHKILA 253 (863)
Q Consensus 186 Lsala~~ya~TgD~~lk~k~~~~Vd~L~~~Q~~~~dGYlga~p~~~~~----r------~~~--l~~~W~pyYt~HKI~a 253 (863)
+++|+.++..++|+++++.+.+-.+-+.+..-. +|| +.+-.-.++ . ... .+..|+.=+.. .+.
T Consensus 179 i~~L~~A~~~~gd~~y~~~A~~ha~~~l~~~~r-~dg--s~~h~~~~d~~~G~~~~~~t~qGy~dds~WaRGqAw--~i~ 253 (397)
T 2zzr_A 179 IQLLFFAYEQTGDEKYRQVAVNHFYASANNVVR-DDS--SAFHTFYFDPETGEPLKGVTRQGYSDESSWARGQAW--GIY 253 (397)
T ss_dssp THHHHHHHHHHCCHHHHHHHHHHHHHHHHHTBC-TTS--CBCSEEEECTTTCCEEEEECTTSSSTTSCBHHHHHH--HHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCcC-CCC--CeEEEEEeeCCCCCcccCCcccccCcchhhHHHHHH--HHH
Confidence 688999999999999999999988888877632 333 111110110 0 000 11246665555 678
Q ss_pred HHHHHHHHcCCHhHHHHHHHHHHHHHHHhhhhhccchhh----hhhccccccc-cchHHHHHHHHHhcCC---HH--HHH
Q 002940 254 GLLDQYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSIE----RHWQTLNEEA-GGMNDVLYKLFCITQD---PK--HLM 323 (863)
Q Consensus 254 GLld~Y~~tGn~~AL~va~~~ad~~~~r~~~~~~~~~~~----~~~~~l~~E~-GGmne~L~~LY~~TGd---~r--yL~ 323 (863)
|+++.|++||+++.|+.|.++++++.+++..-...+.+. ......+..- ..+...|.+|++.|++ ++ |++
T Consensus 254 gl~~lY~~T~d~~yL~~A~~la~~~l~~~~~d~~pywdt~~~~~~~~~~D~Sa~aiaA~~Ll~L~~~~~~~~~~~~~Y~~ 333 (397)
T 2zzr_A 254 GIPLSYRKMKDYQQIILFKGMTNYFLNRLPEDKVSYWDLIFTDGSGQPRDTSATATAVCGIHEMLKYLPEVDPDKETYKY 333 (397)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHHHHHHTCCTTSCCBSBTTCCTTSCCCBCHHHHHHHHHHHHHHHTTSCTTCTTHHHHHH
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHhCCccccCCCCCCCCCcCCCCHHHHHHHHHHHHHHhcCccchhhHHHHH
Confidence 899999999999999999999999998874210001000 0001111111 1344789999999997 78 999
Q ss_pred HHhhccc
Q 002940 324 LAHLFDK 330 (863)
Q Consensus 324 lA~~f~~ 330 (863)
.|++..+
T Consensus 334 ~A~~~l~ 340 (397)
T 2zzr_A 334 AMHTMLR 340 (397)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9988764
No 26
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=96.45 E-value=0.0081 Score=67.02 Aligned_cols=140 Identities=15% Similarity=0.024 Sum_probs=91.8
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHhcCCcccccCCchhhh--------hhh----hcCCCccchhhHHHHHH
Q 002940 186 LSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFD--------RLE----ALIPVWAPYYTIHKILA 253 (863)
Q Consensus 186 Lsala~~ya~TgD~~lk~k~~~~Vd~L~~~Q~~~~dGYlga~p~~~~~--------r~~----~l~~~W~pyYt~HKI~a 253 (863)
|++|+.++..++|+++++.+.+-++-+.+..-. +||= .+-...|+ .+. .....|+.=+.. ++.
T Consensus 154 i~~L~~A~~~~gd~~y~~~A~~~a~~~l~~~~r-~dgs--~~h~~~~D~~tG~~~~~~t~qG~~dds~WaRGqAw--~i~ 228 (377)
T 2ahf_A 154 LPLLLWAGEQTGDPEYRRVAEAHALKSRRFLVR-GDDS--SYHTFYFDPENGNAIRGGTHQGNTDGSTWTRGQAW--GIY 228 (377)
T ss_dssp HHHHHHHHHHHCCTHHHHHHHHHHHHHHHHTBB-TTSC--BCSEEEECTTTCCEEEEECSSSSSTTSCBHHHHHH--HHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCcC-CCCC--eEEEEEeeCCCCCeeeCCCcCCcCCcchhHHHHHH--HHH
Confidence 889999999999999999999998888877642 3441 11110111 000 012356655555 677
Q ss_pred HHHHHHHHcCCHhHHHHHHHHHHHHHHHhhhhhccchhhh----hhccccccc-cchHHHHHHHHHhcC-----CHHHHH
Q 002940 254 GLLDQYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSIER----HWQTLNEEA-GGMNDVLYKLFCITQ-----DPKHLM 323 (863)
Q Consensus 254 GLld~Y~~tGn~~AL~va~~~ad~~~~r~~~~~~~~~~~~----~~~~l~~E~-GGmne~L~~LY~~TG-----d~ryL~ 323 (863)
|+++.|++|++++.|+.|+++++++.+++.+-...+.+.. ........- ..+...|.+|++.|+ +++|++
T Consensus 229 gl~~ly~~T~d~~yL~~A~~la~~~l~~~~~d~~pywd~~~~~~~~~~~d~Sa~aiaA~~Ll~L~~~~~~~~~~~~~Y~~ 308 (377)
T 2ahf_A 229 GFALNSRYLGNADLLETAKRMARHFLARVPEDGVVYWDFEVPQEPSSYRDSSASAITACGLLEIASQLDESDPERQRFID 308 (377)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHTTCCTTSSCBSBTTSCCCTTSCBCHHHHHHHHHHHHHHHHTSCTTCHHHHHHHH
T ss_pred HHHHHHHHHCChHHHHHHHHHHHHHHHhhHHhCCcccccCCCccCCCccCCCHHHHHHHHHHHHHHhcCccccchHHHHH
Confidence 8999999999999999999999999987632100010000 000111111 134478999999996 789999
Q ss_pred HHhhccc
Q 002940 324 LAHLFDK 330 (863)
Q Consensus 324 lA~~f~~ 330 (863)
.|++..+
T Consensus 309 ~A~~~l~ 315 (377)
T 2ahf_A 309 AAKTTVT 315 (377)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998764
No 27
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=96.18 E-value=0.091 Score=61.63 Aligned_cols=242 Identities=13% Similarity=0.018 Sum_probs=124.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccccCCchhhhhhhh------------cCCCccchh-------hHHHHHHHHHHHH
Q 002940 199 ESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEA------------LIPVWAPYY-------TIHKILAGLLDQY 259 (863)
Q Consensus 199 ~~lk~k~~~~Vd~L~~~Q~~~~dGYlga~p~~~~~r~~~------------l~~~W~pyY-------t~HKI~aGLld~Y 259 (863)
+.+++.++.-+|.|++||. ++|++-.- +.+.|.. ...+..+.| ++ ...++|-.++
T Consensus 190 ~~lldE~rWg~D~llkm~~--~~g~~y~q---Vgd~W~~d~~~R~~~~~~~~~~~~~~~y~~~~~~~ag-l~aAALA~As 263 (586)
T 3h7l_A 190 TRLIEEALFGADFLVRMQN--EKGFFYMT---VFDKWSKDTAQREICAYETQLGHKFDDYQAGFRQGGG-VAIAALAAAS 263 (586)
T ss_dssp HHHHHHHHHHHHHHHHTBC--TTSCBBCE---EECTTCCCGGGCEEEEEETTTTEEESCCBCCGGGTHH-HHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhccc--CCCeEEEE---ecCCCCCCCCccccccccCCCCCCCcceecCCCCcHH-HHHHHHHHHh
Confidence 5788888889999999999 78875321 1111110 001111112 11 2344454555
Q ss_pred HH-----cCCHhHHHHHHHHHHHHHHHhhhhhccchhhhhhccccccccchHHHHHHHHHhcCCHHHHHHHhhccc----
Q 002940 260 TY-----ADNAEALRMTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDK---- 330 (863)
Q Consensus 260 ~~-----tGn~~AL~va~~~ad~~~~r~~~~~~~~~~~~~~~~l~~E~GGmne~L~~LY~~TGd~ryL~lA~~f~~---- 330 (863)
++ .+.++.|+.|+++.+|+.+....+... .+ .-...|+ -+-.+.+|||+.|||++||+.|..+.+
T Consensus 264 rvf~d~~~~a~~~L~aA~~a~~fa~~~~~~y~~~--g~---~~~~De~-~~~WAA~eLy~ATgd~~YL~~a~~~a~~l~~ 337 (586)
T 3h7l_A 264 RLGVHGEYDQQKYRNAAENGYWHLKEHNTQYLND--GE---ENIIDEY-CALLASVELFKATKETRYLEESRLWAQRLVA 337 (586)
T ss_dssp TSSSCSSSCHHHHHHHHHHHHHHHHHHHHHHSTT--SC---CCHHHHH-HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHT
T ss_pred cccCCCCcChHHHHHHHHHHHHHHHhcCccccCC--CC---ccchhHH-HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 55 456789999999999998653322110 00 0011232 235678899999999999999876421
Q ss_pred -------ccccchhhccCCCCCCCcccCCCCeeehhhHHHHHhCCchhhc----------c----------------cee
Q 002940 331 -------PCFLGLLALQADDISGFHSNTHIPIVIGSQMRYEVTGDQLHKE----------G----------------HQL 377 (863)
Q Consensus 331 -------~~~~~~la~~~D~l~~~HanthiP~~~G~A~~Y~~TGD~~yl~----------~----------------h~y 377 (863)
..++|.-...+ .-+..|+.....-++..++..++++|+.+.+ . +.|
T Consensus 338 ~~~~~~~~g~~w~~~d~~-~r~~~d~a~~gl~~iaLl~l~~~~~d~~~~~~a~~~i~~~~d~~l~~~~~~~npfg~~~~~ 416 (586)
T 3h7l_A 338 RQMSDEQIQHFWSANQDG-SRPYFHAAEAGLPTIALCEYLAIEDDSVQTESVKCIVNRACEFEIKISNKVTNPFGYPRQY 416 (586)
T ss_dssp TEECCSSCSSEEBSSSSS-SSBCCCTTTTTHHHHHHHHHHHHCCSTTTTHHHHHHHHHHHHHHHHHHHSSCCSSCCCCEE
T ss_pred hccCCccCCCcCCCcccC-CcccccccccHHHHHHHHHhhhhcCChHHHHHHHHHHHHHhhhhhhhcccccCccccHHHH
Confidence 12222210000 0112233221112344566678999875544 1 134
Q ss_pred ccccCCCCCCCCcCCccccccCCCCCc-cchhHHHHHHHHHHHhhccccc----chHHHHHHHHHhhhcccccCCCCCCc
Q 002940 378 ESSGTNIGHFNFKSDPKRLASNLDSNT-EESCTTYNMLKVSRHLFRWTKE----IAYADYYERSLTNGVLGIQRGTEPGV 452 (863)
Q Consensus 378 ~tGG~s~~E~~~f~~p~~l~~~l~~~~-~EtCat~nmlkl~~~L~~~tgD----~~YaD~~ERalyN~iLa~q~~~~~g~ 452 (863)
+.+..+..+..+|. |..-.. ..-= .+.=...|...++-..+.+++| .+|.|.....+ |=|||.- | -.
T Consensus 417 ~~~~~~~~~~~y~~-p~~~~~--~y~WqGsN~~~an~a~~~~~a~~~~~~~~~~~~y~~~a~~ql-dyiLG~N-p---~~ 488 (586)
T 3h7l_A 417 VKGVNESKRDAFFV-AHNNES--GYWWQGENARLGSLATMAYLAQPHIASQEIQQQLSVFAQDAL-NWIVGLN-P---YD 488 (586)
T ss_dssp ECCTTSCCEEESSC-CSSSTT--SSCCCCCHHHHHHHHHHHHHSGGGCCCHHHHHHHHHHHHHHH-HHHBTCS-T---TC
T ss_pred hhhhcccccccccc-ccCCCC--CCeeeChHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHhh-hhhccCC-C---CC
Confidence 33222211111222 111000 0011 2333445556666666778888 78888887766 7778763 2 23
Q ss_pred EEEeccCCC
Q 002940 453 MIYLLPLAP 461 (863)
Q Consensus 453 ~~Y~~PL~~ 461 (863)
+.|++..+.
T Consensus 489 ~s~v~G~G~ 497 (586)
T 3h7l_A 489 MCMLDGHGR 497 (586)
T ss_dssp CBCBTTSSS
T ss_pred CccEEeeCC
Confidence 455554443
No 28
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1
Probab=94.75 E-value=0.085 Score=60.51 Aligned_cols=195 Identities=12% Similarity=0.075 Sum_probs=108.9
Q ss_pred HHHHHHHHHHHcCCHhHHHHHHHHHHHHHHHhhhhhccchhh-----------hhhc----cccccccchHHHHHHHHHh
Q 002940 251 ILAGLLDQYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSIE-----------RHWQ----TLNEEAGGMNDVLYKLFCI 315 (863)
Q Consensus 251 I~aGLld~Y~~tGn~~AL~va~~~ad~~~~r~~~~~~~~~~~-----------~~~~----~l~~E~GGmne~L~~LY~~ 315 (863)
++-|||.+|.++|++..|+.|+.+||.+..-|.. ..+.+.. ..|. ..-.|.|.+..-+..|.++
T Consensus 110 ~LGGLLSAy~Lsgd~~lL~kA~dLad~LlpAFdT-ptgiP~~~vnl~~g~~~~~~~~~~~~s~lAe~gsl~LEF~~LS~l 188 (478)
T 1nxc_A 110 FVGGLLSAYYLSGEEIFRKKAVELGVKLLPAFHT-PSGIPWALLNMKSGIGRNWPWASGGSSILAEFGTLHLEFMHLSHL 188 (478)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHHGGGGCS-SSSCCCSEEETTTCCEECCTTSGGGCEEHHHHTTCHHHHHHHHHH
T ss_pred hhhhhhhhhhccCCHHHHHHHHHHHHHHHHhhcC-CCCCCcceeecccccCCCCcccCCCCcccccccchhhhHHHHHHH
Confidence 6789999999999999999999999999866542 1111100 0011 1223556677778899999
Q ss_pred cCCHHHHHHHhhcccccccchhhccCCCCCCCcccCC--C----Ceeeh---------hhHHHHHhC--Cchhhc-----
Q 002940 316 TQDPKHLMLAHLFDKPCFLGLLALQADDISGFHSNTH--I----PIVIG---------SQMRYEVTG--DQLHKE----- 373 (863)
Q Consensus 316 TGd~ryL~lA~~f~~~~~~~~la~~~D~l~~~Hanth--i----P~~~G---------~A~~Y~~TG--D~~yl~----- 373 (863)
|||++|.+.|++..+. ++... ..+.|-+.+-|.+ . -.-+| ..+.|.++| |+.|++
T Consensus 189 TGd~~Y~~~a~~~~~~--l~~~~-~~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~YEYLlK~~il~g~~d~~~~~m~~~a 265 (478)
T 1nxc_A 189 SGDPVFAEKVMKIRTV--LNKLD-KPEGLYPNYLNPSSGQWGQHHVSVGGLGDSFYEYLLKAWLMSDKTDLEAKKMYFDA 265 (478)
T ss_dssp HCCTHHHHHHHHHHHH--HHHSC-CGGGCCCSEECTTTCCBCSCEECSSTTTHHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred HCChHHHHHHHHHHHH--HHhcC-CCCCccccccCCCCCCccCceeeecCCCchHHHHHHHHHHHcCCchHHHHHHHHHH
Confidence 9999999999986431 11100 0011111111111 0 11233 345567787 567766
Q ss_pred -----cceeccccCCCCCCCCcCCccccccCC-CCCccchhHHHHHHHHHHHhhcccccchHHHHHHHH------Hhhhc
Q 002940 374 -----GHQLESSGTNIGHFNFKSDPKRLASNL-DSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERS------LTNGV 441 (863)
Q Consensus 374 -----~h~y~tGG~s~~E~~~f~~p~~l~~~l-~~~~~EtCat~nmlkl~~~L~~~tgD~~YaD~~ERa------lyN~i 441 (863)
+|+.-. +.+.. .|..... .+.+ +....=+|-.-+|+-|.-.++......+|++..++. +|+..
T Consensus 266 ~~~i~~~l~~~---~~~~~-~~v~~~~-~~~~~~~~~hL~cF~gG~~aLg~~~~~~~~~~~~l~~a~~l~~tC~~~y~~~ 340 (478)
T 1nxc_A 266 VQAIETHLIRK---SSGGL-TYIAEWK-GGLLEHKMGHLTCFAGGMFALGADGAPEARAQHYLELGAEIARTCHESYNRT 340 (478)
T ss_dssp HHHHHHHTEEE---CTTSC-EEECEEE-TTEEECEEETGGGGHHHHHHHTSTTSCTTCHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHhccc---CCCCc-EEEEecc-CCcccccccchhhhhHHHHHhccccccccchHHHHHHHHHHHHHHHHHHHhc
Confidence 444321 11110 1111000 0011 233456899999998887776655556788777765 45555
Q ss_pred ccccCCCCCCcEEEecc
Q 002940 442 LGIQRGTEPGVMIYLLP 458 (863)
Q Consensus 442 La~q~~~~~g~~~Y~~P 458 (863)
..+.-| ..+++++
T Consensus 341 ~tgl~P----E~~~~~~ 353 (478)
T 1nxc_A 341 YVKLGP----EAFRFDG 353 (478)
T ss_dssp SSSSCC----SEEESST
T ss_pred ccCCCC----eEEEecc
Confidence 544433 2455543
No 29
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=93.74 E-value=0.19 Score=56.34 Aligned_cols=128 Identities=16% Similarity=0.098 Sum_probs=82.6
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHhcCCcccccCCchhhhhhhhcCCCccchhhHHHHHHHHHHHHHHcCCH
Q 002940 186 LSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTYADNA 265 (863)
Q Consensus 186 Lsala~~ya~TgD~~lk~k~~~~Vd~L~~~Q~~~~dGYlga~p~~~~~r~~~l~~~W~pyYt~HKI~aGLld~Y~~tGn~ 265 (863)
+-++..++..++|+++++.+...++.+.+.|. ++|. +|...-+. .+....|--=-.+ |...++.+++.++++
T Consensus 237 ~~~Ll~~~~~~~~~~~~~~i~~~l~~l~~~~~--~~g~---wp~~~~~~-~~~~~~wChG~~G--i~~~l~~~~~~~~~~ 308 (411)
T 3e6u_A 237 YYYLMQPSLQVSQGKLHSLVKPSVDYVCQLKF--PSGN---YPPCIGDN-RDLLVHWCHGAPG--VIYMLIQAYKVFREE 308 (411)
T ss_dssp HHHHTCGGGCCCHHHHHHTHHHHHHHHHHTCC--TTSC---CCSBTTCC-CCCCCSSSSSHHH--HHHHHHHHHHHHCCH
T ss_pred HHHHHHHHhhcChHHHHHHHHHHHHHHHHhhc--cCCC---CCCCCCcc-cCccccccCCcHH--HHHHHHHHHHHcCCH
Confidence 34555566789999999999999999998887 5664 23211000 0001122211133 445566888999999
Q ss_pred hHHHHHHHHHHHHHHHhhhhhccchhhhhhcccccccc--chHHHHHHHHHhcCCHHHHHHHhhcccc
Q 002940 266 EALRMTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAG--GMNDVLYKLFCITQDPKHLMLAHLFDKP 331 (863)
Q Consensus 266 ~AL~va~~~ad~~~~r~~~~~~~~~~~~~~~~l~~E~G--Gmne~L~~LY~~TGd~ryL~lA~~f~~~ 331 (863)
+.++.+.+.++.+.++ .. .... ..-| +| |.-+.|.++|+.|||++|++.|+++.+.
T Consensus 309 ~~~~~a~~~~~~~~~~--g~----~~~~---~~lC-hG~aG~~~~ll~~~~~t~~~~~~~~A~~~~~~ 366 (411)
T 3e6u_A 309 KYLCDAYQCADVIWQY--GL----LKKG---YGLC-HGSAGNAYAFLTLYNLTQDMKYLYRACKFAEW 366 (411)
T ss_dssp HHHHHHHHHHHHHHHH--CS----BTTC---SCST-TSHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc--Cc----cCCC---Ccee-cChHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 9999999888766542 10 0000 0111 23 5668999999999999999999987653
No 30
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A
Probab=92.75 E-value=0.48 Score=55.02 Aligned_cols=176 Identities=16% Similarity=0.128 Sum_probs=99.2
Q ss_pred HHHHHHHHHHHcCCHhHHHHHHHHHHHHHHHhhhhhccchhhh-----------hhc--cccccccchHHHHHHHHHhcC
Q 002940 251 ILAGLLDQYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSIER-----------HWQ--TLNEEAGGMNDVLYKLFCITQ 317 (863)
Q Consensus 251 I~aGLld~Y~~tGn~~AL~va~~~ad~~~~r~~~~~~~~~~~~-----------~~~--~l~~E~GGmne~L~~LY~~TG 317 (863)
++-|||.+|.++|++..|+.|+.+||.+..-|.. ..+.+... .|. ..-.|.|.+..-+..|.++||
T Consensus 174 ~LGGLLSAy~Lsgd~~lL~kA~dLadrLlpAFdT-ptgiP~~~vnl~~g~~~~~~~~~~s~lAe~GSl~LEF~~LS~LTG 252 (538)
T 1x9d_A 174 ILGGLLSAYHLSGDSLFLRKAEDFGNRLMPAFRT-PSKIPYSDVNIGTGVAHPPRWTSDSTVAEVTSIQLEFRELSRLTG 252 (538)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHHGGGGCS-TTSCCCSEEETTTCCEECCTTCSEEEHHHHHSSHHHHHHHHHHHC
T ss_pred hhhhhhhHHHhcCCHHHHHHHHHHHHHHHHhhcC-CCCCCcceeeecccccCCCCcCCCceeccccceeeeHHHHHHHhC
Confidence 6799999999999999999999999999865542 11111100 011 112355667777889999999
Q ss_pred CHHHHHHHhhcccccccchhhccCCCCCCCcccCC--C-----Ceeeh---------hhHHHHHhC--Cchhhc------
Q 002940 318 DPKHLMLAHLFDKPCFLGLLALQADDISGFHSNTH--I-----PIVIG---------SQMRYEVTG--DQLHKE------ 373 (863)
Q Consensus 318 d~ryL~lA~~f~~~~~~~~la~~~D~l~~~Hanth--i-----P~~~G---------~A~~Y~~TG--D~~yl~------ 373 (863)
|++|.+.|++..+. ++......+.|-+.+-+.+ . -.-+| ..+.|.++| |+.|++
T Consensus 253 d~~Y~~~a~r~~~~--l~~~~~~~~GL~p~~i~~~tG~~~~~~~~~lGa~~DS~YEYLlK~~il~g~~d~~y~~my~~a~ 330 (538)
T 1x9d_A 253 DKKFQEAVEKVTQH--IHGLSGKKDGLVPMFINTHSGLFTHLGVFTLGARADSYYEYLLKQWIQGGKQETQLLEDYVEAI 330 (538)
T ss_dssp CTHHHHHHHHHHHH--HHTCSCCBTTBCCSEEETTTCCEESTTEECSSTTTHHHHHHHHHHHHHTTSCCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHH--HHhcccCCCCCcceEEeCCCCCccCCcceeecCCccHHHHHHHHHHHHcCCchHHHHHHHHHHH
Confidence 99999999986431 1110000111111111111 1 12233 345677888 777776
Q ss_pred ----cceeccccCCCCCCCCcCCccccccCC-CCCccchhHHHHHHHHHHHhhcccccchHHHHHHHH
Q 002940 374 ----GHQLESSGTNIGHFNFKSDPKRLASNL-DSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERS 436 (863)
Q Consensus 374 ----~h~y~tGG~s~~E~~~f~~p~~l~~~l-~~~~~EtCat~nmlkl~~~L~~~tgD~~YaD~~ERa 436 (863)
+|++-... ... ..|..... .+.+ +....=+|-.-+|+-|.-.++. +.+|++..++.
T Consensus 331 ~~i~~~L~~~~~--~~~-~~~v~~~~-~g~~~~~~~hL~cF~gG~~aLgg~~~~---~~~~l~~a~~L 391 (538)
T 1x9d_A 331 EGVRTHLLRHSE--PSK-LTFVGELA-HGRFSAKMDHLVCFLPGTLALGVYHGL---PASHMELAQEL 391 (538)
T ss_dssp HHHHHHTEEECT--TTC-CEEECEEE-TTEEECEEEGGGGHHHHHHHHHHHTTC---CHHHHHHHHHH
T ss_pred HHHHHHhccCCC--CCC-ceEEEecc-CCccCcccchHhhhhhhHHHhcCcccC---cHHHHHHHHHH
Confidence 44432110 011 01111000 0111 2345678999999999988753 34566666554
No 31
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=92.49 E-value=0.11 Score=58.50 Aligned_cols=179 Identities=11% Similarity=-0.016 Sum_probs=97.5
Q ss_pred cchHHHHHHHHHHhcCcHHHHHH-HHHHHHHHHHHHHh----cCCcccccCCchhhhhhhh-cCCCccchhhHHHHHHHH
Q 002940 182 VGHYLSASALMWASTHNESLKEK-MSAVVSALSACQKE----IGSGYLSAFPTEQFDRLEA-LIPVWAPYYTIHKILAGL 255 (863)
Q Consensus 182 ~GhyLsala~~ya~TgD~~lk~k-~~~~Vd~L~~~Q~~----~~dGYlga~p~~~~~r~~~-l~~~W~pyYt~HKI~aGL 255 (863)
..-|+-++-.++..++|+++.+. +.++++.+.++-+. ..... ..|- .+ .|.. ....|+-=.++ |+..|
T Consensus 167 ~AG~l~aLl~L~~~~~~~~~~~~~i~~i~~~ii~~g~~~~~~~~~~~--~~pl-~~-~w~~~~~~G~aHG~aG--I~~~L 240 (411)
T 3e6u_A 167 RIGYIYALLFVNKNFGVEKIPQSHIQQICETILTSGENLARKRNFTA--KSPL-MY-EWYQEYYVGAAHGLAG--IYYYL 240 (411)
T ss_dssp HHHHHHHHHHHHHHHSSCCSCHHHHHHHHHHHHHHHHHHHHHTTTTT--TCSC-CC-CBTTBCBCSTTTSHHH--HHHHH
T ss_pred cHHHHHHHHHHHHHcCCccchHHHHHHHHHHHHHHHHHHHHhccccC--CCCc-ce-eecCccCCcccccHHH--HHHHH
Confidence 33456677778888998765544 45666666554321 01000 0110 00 0100 11112211223 55556
Q ss_pred HHHHHHcCCHhHHHHHHHHHHHHHHHhhhhhccchhh---hhhcccccccc--chHHHHHHHHHhcCCHHHHHHHhhccc
Q 002940 256 LDQYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSIE---RHWQTLNEEAG--GMNDVLYKLFCITQDPKHLMLAHLFDK 330 (863)
Q Consensus 256 ld~Y~~tGn~~AL~va~~~ad~~~~r~~~~~~~~~~~---~~~~~l~~E~G--Gmne~L~~LY~~TGd~ryL~lA~~f~~ 330 (863)
+..+..+++++.++.+.+..+|+.+...+. ..++.. ......+--+| |+-.++..+++.++|++|++.|.+..+
T Consensus 241 l~~~~~~~~~~~~~~i~~~l~~l~~~~~~~-g~wp~~~~~~~~~~~~wChG~~Gi~~~l~~~~~~~~~~~~~~~a~~~~~ 319 (411)
T 3e6u_A 241 MQPSLQVSQGKLHSLVKPSVDYVCQLKFPS-GNYPPCIGDNRDLLVHWCHGAPGVIYMLIQAYKVFREEKYLCDAYQCAD 319 (411)
T ss_dssp TCGGGCCCHHHHHHTHHHHHHHHHHTCCTT-SCCCSBTTCCCCCCCSSSSSHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred HHHHhhcChHHHHHHHHHHHHHHHHhhccC-CCCCCCCCcccCccccccCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 666778999999999999999998754321 112110 00001111245 788999999999999999999987543
Q ss_pred ccccchhhccCCCCCCCcccCCCCe--eehhhHHHHHhCCchhhc
Q 002940 331 PCFLGLLALQADDISGFHSNTHIPI--VIGSQMRYEVTGDQLHKE 373 (863)
Q Consensus 331 ~~~~~~la~~~D~l~~~HanthiP~--~~G~A~~Y~~TGD~~yl~ 373 (863)
..+ . . ..+...+...|... .....+.|+.|||++|++
T Consensus 320 ~~~--~--~--g~~~~~~~lChG~aG~~~~ll~~~~~t~~~~~~~ 358 (411)
T 3e6u_A 320 VIW--Q--Y--GLLKKGYGLCHGSAGNAYAFLTLYNLTQDMKYLY 358 (411)
T ss_dssp HHH--H--H--CSBTTCSCSTTSHHHHHHHHHHHHHHHCCHHHHH
T ss_pred HHH--h--c--CccCCCCceecChHHHHHHHHHHHHHhCCHHHHH
Confidence 211 1 0 00011122334332 233566799999999988
No 32
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A*
Probab=90.48 E-value=0.94 Score=51.91 Aligned_cols=178 Identities=11% Similarity=0.034 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHc-CC-----------HhHHHHHHHHHHHHHHHhhhhhccchhh--------hhh--ccccccccchHHH
Q 002940 251 ILAGLLDQYTYA-DN-----------AEALRMTTWMVEYFYNRVQNVIKKYSIE--------RHW--QTLNEEAGGMNDV 308 (863)
Q Consensus 251 I~aGLld~Y~~t-Gn-----------~~AL~va~~~ad~~~~r~~~~~~~~~~~--------~~~--~~l~~E~GGmne~ 308 (863)
++-|||.+|.++ |+ +..|+.|+.+||.+..-|.. ..+.+.. .+. ...-.|.|.+..-
T Consensus 92 ~LGGLLSAy~Ls~g~~~~~~~~~~~~~~lL~kA~dLadrLlpAF~T-ptgiP~~~vnl~~~~~~~~~~~~~Ae~gsl~LE 170 (475)
T 2ri9_A 92 YLAGMLSGYDLLQGPAKNLVDNQDLIDGLLDQSRNLADVLKFAFDT-PSGVPYNNINITSHGNDGATTNGLAVTGTLVLE 170 (475)
T ss_dssp HHHHHHHHHHHHHTTTTTSCCCHHHHHHHHHHHHHHHHHHGGGGCS-SSSCCCSEECTTTCCBCCCSEEEHHHHHSCHHH
T ss_pred hHhHHhHHHHhccCccccccccccchHHHHHHHHHHHHHHHHhhcC-CCCCCCceeecccCCCcCCCccchhccccceee
Confidence 679999999999 77 68999999999998765542 1111111 000 0112355666777
Q ss_pred HHHHHHhcCCHHHHHHHhhcccccccchh--h-ccCCCCCCCcccCC--C----Ceeeh---------hhHHHHHhCCc-
Q 002940 309 LYKLFCITQDPKHLMLAHLFDKPCFLGLL--A-LQADDISGFHSNTH--I----PIVIG---------SQMRYEVTGDQ- 369 (863)
Q Consensus 309 L~~LY~~TGd~ryL~lA~~f~~~~~~~~l--a-~~~D~l~~~Hanth--i----P~~~G---------~A~~Y~~TGD~- 369 (863)
+..|.++|||++|.+.|++..+.-. ... . ...+.|-+.+-|.+ . -.-+| ..+.|.++|+.
T Consensus 171 F~~LS~lTGd~~Y~~~a~~~~~~l~-~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~YEYLlK~~il~g~~~ 249 (475)
T 2ri9_A 171 WTRLSDLTGDEEYAKLSQKAESYLL-KPQPSSSEPFPGLVGSSININDGQFADSRVSWNGGDDSFYEYLIKMYVYDPKRF 249 (475)
T ss_dssp HHHHHHHHSCTHHHHHHHHHHHHHH-SCSSGGGCSBTTBCCSEEETTTCCBCCCCBCSSTTTHHHHHHHHHHHHHCTTTT
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHH-hhccccccCCCCCcceEEeCCCCcccCCceeecCCcchHHHHHHHHHHHcCCch
Confidence 8899999999999999998643110 000 0 00111211121111 1 12233 34567888875
Q ss_pred -hhhc----------cceeccccCCCCCCCCcCCcccccc-CC-CCCccchhHHHHHHHHHHHhhcccccchHHHHHHHH
Q 002940 370 -LHKE----------GHQLESSGTNIGHFNFKSDPKRLAS-NL-DSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERS 436 (863)
Q Consensus 370 -~yl~----------~h~y~tGG~s~~E~~~f~~p~~l~~-~l-~~~~~EtCat~nmlkl~~~L~~~tgD~~YaD~~ERa 436 (863)
.|++ +|+.-.-. .... ..|.. ...+ .+ +....=+|-.-+|+-|.-.++. ..+|++..++.
T Consensus 250 ~~~~~m~~~a~~~i~~~l~~~~~-~~~~-~~~v~--~~~~~~~~~~~~hL~cF~~G~~aLgg~~~~---~~~~~~~a~~l 322 (475)
T 2ri9_A 250 ETYKDRWVLAAESTIKHLKSHPK-SRPD-LTFLS--SYSNRNYDLSSQHLTCFDGGSFLLGGTVLD---RQDFIDFGLEL 322 (475)
T ss_dssp HHHHHHHHHHHHHHHHHTEECCS-SCTT-CCEEC--EEETTEEECEEETGGGGHHHHHHHHHHHHT---CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccCCC-CCCC-ceEEE--eccCCccccccchHHHhHHHHHHhcccccc---cHHHHHHHHHH
Confidence 5665 33332110 0001 01111 0001 11 2345568999999999987764 45677776665
Q ss_pred H
Q 002940 437 L 437 (863)
Q Consensus 437 l 437 (863)
.
T Consensus 323 ~ 323 (475)
T 2ri9_A 323 V 323 (475)
T ss_dssp H
T ss_pred H
Confidence 4
No 33
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1
Probab=89.29 E-value=0.95 Score=52.20 Aligned_cols=178 Identities=14% Similarity=0.025 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHcCC------------HhHHHHHHHHHHHHHHHhhhhhccchhh--------hhhc---cccccccchHH
Q 002940 251 ILAGLLDQYTYADN------------AEALRMTTWMVEYFYNRVQNVIKKYSIE--------RHWQ---TLNEEAGGMND 307 (863)
Q Consensus 251 I~aGLld~Y~~tGn------------~~AL~va~~~ad~~~~r~~~~~~~~~~~--------~~~~---~l~~E~GGmne 307 (863)
++-|||.+|.++|+ +..|+.|+.+||.+..-|.. ..+.+.. ..+. ..-.|.|.+..
T Consensus 105 ~LGGLLSAy~Ls~~~~~~~~~~~~~~~~lL~kA~dLadrLlpAFdT-ptgiP~~~vnl~~~~~~~~~~~~~~Ae~gsl~L 183 (503)
T 1hcu_A 105 YLGGLLSAYDLLRGPFSSLATNQTLVNSLLRQAQTLANGLKVAFTT-PSGVPDPTVFFNPTVRRSGASSNNVAEIGSLVL 183 (503)
T ss_dssp HHHHHHHHHHHHHTTTGGGCCCHHHHHHHHHHHHHHHHHHGGGGCS-SSSCCCSEEECSSSCEECCCSEEEHHHHTTSHH
T ss_pred hHhHHHHHHHHccCccccccccccchHHHHHHHHHHHHHHHHhhcC-CCCCCcceeecccCCCCCCCCccccccccceee
Confidence 67999999999998 48999999999998765542 1111110 0010 11235566777
Q ss_pred HHHHHHHhcCCHHHHHHHhhcccccccchhh--ccCCCCCCCcccCC--C----Ceeeh---------hhHHHHHhCCc-
Q 002940 308 VLYKLFCITQDPKHLMLAHLFDKPCFLGLLA--LQADDISGFHSNTH--I----PIVIG---------SQMRYEVTGDQ- 369 (863)
Q Consensus 308 ~L~~LY~~TGd~ryL~lA~~f~~~~~~~~la--~~~D~l~~~Hanth--i----P~~~G---------~A~~Y~~TGD~- 369 (863)
-+..|.++|||++|.+.|++..+.-. .... ...+.|-+.+-|.+ . -.-+| ..+.|.++|+.
T Consensus 184 EF~~LS~lTGd~~Y~~~a~~~~~~l~-~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~YEYLlK~~il~g~~~ 262 (503)
T 1hcu_A 184 EWTRLSDLTGNPQYAQLAQKGESYLL-NPKGSPEAWPGLIGTFVSTSNGTFQDSSGSWSGLMDSFYEYLIKMYLYDPVAF 262 (503)
T ss_dssp HHHHHHHHHSCTHHHHHHHHHHHHHH-SCCBSCCSBTTBCCSEEETTTCCBCCCEECSSTTTHHHHHHHHHHHHHCTTTT
T ss_pred ehHHHHHHhCChHHHHHHHHHHHHHH-hhhcccCCCCCceeeEEeCCCCcccCCeeeecCCCccHHHHHHHHHHHcCCch
Confidence 78899999999999999998643100 0000 00111211121111 1 12233 34567888875
Q ss_pred -hhhc----------cceeccccCCCCCCCCcCCcccccc-CC-CCCccchhHHHHHHHHHHHhhcccccchHHHHHHHH
Q 002940 370 -LHKE----------GHQLESSGTNIGHFNFKSDPKRLAS-NL-DSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERS 436 (863)
Q Consensus 370 -~yl~----------~h~y~tGG~s~~E~~~f~~p~~l~~-~l-~~~~~EtCat~nmlkl~~~L~~~tgD~~YaD~~ERa 436 (863)
.|++ +|+.-.-. .... ..|.. ...+ .+ +....=+|-.-+|+-|.-.++. ..+|++..++.
T Consensus 263 ~~y~~m~~~a~~~i~~~l~~~~~-~~~~-~~~v~--~~~~~~~~~~~~hL~cF~~G~~aLgg~~~~---~~~~~~~a~~L 335 (503)
T 1hcu_A 263 AHYKDRWVLGADSTIGHLGSHPS-TRKD-LTFLS--SYNGQSTSPNSGHLASFGGGNFILGGILLN---EQKYIDFGIKL 335 (503)
T ss_dssp HHHHHHHHHHHHHHHHHTEECBT-TCTT-CCEEC--EEETTEEESEEEGGGGGHHHHHHHHHHHHT---CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccCCC-CCCC-ceEEE--eccCCccccccchhhhhhhHHHHhcCcccc---cHHHHHHHHHH
Confidence 5665 33332110 0001 01111 0001 11 2345668999999999987764 45677776665
Q ss_pred H
Q 002940 437 L 437 (863)
Q Consensus 437 l 437 (863)
.
T Consensus 336 ~ 336 (503)
T 1hcu_A 336 A 336 (503)
T ss_dssp H
T ss_pred H
Confidence 4
No 34
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A
Probab=88.12 E-value=2.5 Score=47.81 Aligned_cols=264 Identities=14% Similarity=0.073 Sum_probs=124.5
Q ss_pred CCCCCCCCCcCccCcccchH-HHHHHHHHHhc--------CcHHHHHHHHHHHHHHHHHHHhcCCcccccCC-ch-----
Q 002940 166 PYGGWEEPSCELRGHFVGHY-LSASALMWAST--------HNESLKEKMSAVVSALSACQKEIGSGYLSAFP-TE----- 230 (863)
Q Consensus 166 ~ygGWE~~~~~l~Gh~~Ghy-Lsala~~ya~T--------gD~~lk~k~~~~Vd~L~~~Q~~~~dGYlga~p-~~----- 230 (863)
-.|||-..+-..+=.+++.| +..|++.+... +-+.+++.++.-+|.|++||. ++|.+-.-- ..
T Consensus 48 l~GGwyDAGD~~Ky~~p~a~t~~~L~w~~~e~~~~~~~~~~~~d~ldeikwg~D~llk~~~--~~g~~y~qVgd~~~Dh~ 125 (433)
T 1ks8_A 48 LTGGYFDAGDFVKFGFPMAYTATVLAWGLIDFEAGYSSAGALDDGRKAVKWATDYFIKAHT--SQNEFYGQVGQGDADHA 125 (433)
T ss_dssp CCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHCC--BTTBEEEEESCHHHHHT
T ss_pred CCCceeECCCCCeeccchHHHHHHHHHHHHHhHHhhhcCCchHHHHHHHHHHHHHHHHhcc--CCCcEEEEeCCCCcCCc
Confidence 46899765433333344444 23444444332 347899999999999999998 444321100 00
Q ss_pred hhhhhhhc---CCCcc-----chh-hHHHHHHHHHHHHHHcCC------HhHHHHHHHHHHHHHHHhhhhhccchhhhhh
Q 002940 231 QFDRLEAL---IPVWA-----PYY-TIHKILAGLLDQYTYADN------AEALRMTTWMVEYFYNRVQNVIKKYSIERHW 295 (863)
Q Consensus 231 ~~~r~~~l---~~~W~-----pyY-t~HKI~aGLld~Y~~tGn------~~AL~va~~~ad~~~~r~~~~~~~~~~~~~~ 295 (863)
.+.+-++. +..+. |-- ..-.+-+.|-++++.-.+ ++.|+.|+++-+|..+.-+......+...
T Consensus 126 ~w~~Pe~~~~~R~~y~~~~~~pgs~~a~~~AAalA~as~vfk~~D~~yA~~~L~~A~~~~~fa~~~~~~y~~~~~~~~-- 203 (433)
T 1ks8_A 126 FWGRPEDMTMARPAYKIDTSRPGSDLAGETAAALAAASIVFRNVDGTYSNNLLTHARQLFDFANNYRGKYSDSITDAR-- 203 (433)
T ss_dssp CCSCGGGCCSCCCEEEECSSSCCHHHHHHHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHHHHHHHSCCCHHHHSGGGG--
T ss_pred ccCCHhhCCCCCceeeccCCCCccHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCcCC--
Confidence 11122221 11110 110 111233333344554432 57888899998888753211100000000
Q ss_pred ccccccccc---hHHHHHHHHHhcCCHHHHHHHhhcccccccchhhccCCCCCCCcccCCCCeeehh-hHHHHHhCCchh
Q 002940 296 QTLNEEAGG---MNDVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQADDISGFHSNTHIPIVIGS-QMRYEVTGDQLH 371 (863)
Q Consensus 296 ~~l~~E~GG---mne~L~~LY~~TGd~ryL~lA~~f~~~~~~~~la~~~D~l~~~HanthiP~~~G~-A~~Y~~TGD~~y 371 (863)
. .=++.|- +..+-+|||..|||++||+.|+.+....-.. .....+. .. .+..|. ..+.++++++.|
T Consensus 204 ~-~Y~ss~~~DE~~WAAa~Ly~aTgd~~Yl~~~~~~~~~~~~~---~~~~~~~---Wd---~~~~g~~~lla~~~~~~~~ 273 (433)
T 1ks8_A 204 N-FYASADYRDELVWAAAWLYRATNDNTYLNTAESLYDEFGLQ---NWGGGLN---WD---SKVSGVQVLLAKLTNKQAY 273 (433)
T ss_dssp G-TSCCCCTHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHTTGG---GSCCCCC---SS---CCHHHHHHHHHHHHCCHHH
T ss_pred C-CCCCCCcccHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCcC---cCcCCcC---cc---chhhHHHHHHhhccChHHH
Confidence 0 0011111 2245579999999999999998754321000 0000010 00 122343 334577888888
Q ss_pred hc---c--ceeccccCCCCCCCCcCCccccccCCCCCccchhHHHHHHHHHHHhhcc-cccchHHHHHHHHHhhhccccc
Q 002940 372 KE---G--HQLESSGTNIGHFNFKSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRW-TKEIAYADYYERSLTNGVLGIQ 445 (863)
Q Consensus 372 l~---~--h~y~tGG~s~~E~~~f~~p~~l~~~l~~~~~EtCat~nmlkl~~~L~~~-tgD~~YaD~~ERalyN~iLa~q 445 (863)
++ . ..+. .+. . ..|+.++- + ..-...=-+.|+.+++-....+ +++.+|.+...+.+ |=|||.
T Consensus 274 ~~~~~~~~~~~~-~~~---~----~tp~Gl~~-~-~~WGs~~~~~n~a~l~~~~~~~~~~~~~y~~~A~~ql-dYiLG~- 341 (433)
T 1ks8_A 274 KDTVQSYVNYLI-NNQ---Q----KTPKGLLY-I-DMWGTLRHAANAAFIMLEAAELGLSASSYRQFAQTQI-DYALGD- 341 (433)
T ss_dssp HHHHHHHHHHHH-HTS---C----BCTTSCBC-C-CSTTHHHHHHHHHHHHHHHHHTTSSHHHHHHHHHHHH-HHHHTT-
T ss_pred HHHHHHHHHHHH-hcC---C----cCCCCcee-e-cCCchhHHHHHHHHHHHHHHhcCCCHHHHHHHHHHhH-hhccCC-
Confidence 76 0 0111 110 0 01111110 0 0111111123444444444455 78899999887765 888887
Q ss_pred CCCCCCcEEEeccCC
Q 002940 446 RGTEPGVMIYLLPLA 460 (863)
Q Consensus 446 ~~~~~g~~~Y~~PL~ 460 (863)
++ ..|+...+
T Consensus 342 n~-----~SyvvG~G 351 (433)
T 1ks8_A 342 GG-----RSFVCGFG 351 (433)
T ss_dssp TS-----SCCBTTSS
T ss_pred CC-----cceEeccC
Confidence 22 25665544
No 35
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A*
Probab=87.48 E-value=0.77 Score=53.04 Aligned_cols=80 Identities=14% Similarity=0.088 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHc------CCHhHHHHHHHHHHHHHHHhhhhhccchhh-----------hhh---ccccccccchHHHHH
Q 002940 251 ILAGLLDQYTYA------DNAEALRMTTWMVEYFYNRVQNVIKKYSIE-----------RHW---QTLNEEAGGMNDVLY 310 (863)
Q Consensus 251 I~aGLld~Y~~t------Gn~~AL~va~~~ad~~~~r~~~~~~~~~~~-----------~~~---~~l~~E~GGmne~L~ 310 (863)
++-|||.+|.++ |++..|+.|+.+||.+..-|..-..+.+.. ..+ ...-.|.|.+..-+.
T Consensus 104 ~LGGLLSAy~Ls~~~~~~~d~~lL~kA~dLadrLlpAFd~TptgiP~~~vnl~~g~~~~~~~~~~~s~~Ae~gSl~LEF~ 183 (511)
T 1dl2_A 104 MLGGLLSAYHLSDVLEVGNKTVYLNKAIDLGDRLALAFLSTQTGIPYSSINLHSGQAVKNHADGGASSTAEFTTLQMEFK 183 (511)
T ss_dssp HHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHGGGGSSSSSCCCSEEETTTCCEECCSSGGGCEEHHHHSSCHHHHH
T ss_pred hhhhhhhHHHhcccccCCCcHHHHHHHHHHHHHHHHhhcCCCCCCCCceeecccCCCCCCCCCCcccccccccceeeeHH
Confidence 679999999999 999999999999999987665111111110 011 111235677777888
Q ss_pred HHHHhcCCHHHHHHHhhccc
Q 002940 311 KLFCITQDPKHLMLAHLFDK 330 (863)
Q Consensus 311 ~LY~~TGd~ryL~lA~~f~~ 330 (863)
.|.++|||++|.+.|++..+
T Consensus 184 ~LS~LTGd~~Y~~~a~r~~~ 203 (511)
T 1dl2_A 184 YLAYLTGNRTYWELVERVYE 203 (511)
T ss_dssp HHHHHHTCHHHHHHHHTTHH
T ss_pred HHHHHHCChHHHHHHHHHHH
Confidence 99999999999999998653
No 36
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A*
Probab=87.31 E-value=2 Score=50.72 Aligned_cols=129 Identities=5% Similarity=-0.129 Sum_probs=65.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcc---cccC--Cc---hhh----hhhhhcC---CCccchhhHH-HHHHHHHHHHHHc
Q 002940 199 ESLKEKMSAVVSALSACQKEIGSGY---LSAF--PT---EQF----DRLEALI---PVWAPYYTIH-KILAGLLDQYTYA 262 (863)
Q Consensus 199 ~~lk~k~~~~Vd~L~~~Q~~~~dGY---lga~--p~---~~~----~r~~~l~---~~W~pyYt~H-KI~aGLld~Y~~t 262 (863)
+.+++.++.-.|.|++||. ++|+ +-.. .. ..| .+-++.. ....|--..- .+-+.|-++++.-
T Consensus 227 ~d~ldeikwg~D~llk~q~--~~g~~~~~~g~v~~~~~D~~w~g~~~~Pe~~~~~R~~~~p~t~~~~~~AAalAaas~vf 304 (609)
T 1ut9_A 227 PDILDEARWEIEFFKKMQV--TEKEDPSIAGMVHHKIHDFRWTALGMLPHEDPQPRYLRPVSTAATLNFAATLAQSARLW 304 (609)
T ss_dssp CHHHHHHHHHHHHHHHHBC--CTTTCGGGTTCEECEEEESSCCCSSCCGGGCCSBEEECCEEHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcc--CCCCcceEEEEecCCCCCcccCCCCCChhhCCCceeecCCCcHHHHHHHHHHHHHHHhc
Confidence 5799999999999999998 6774 1000 00 000 0001110 0011111111 1222233444543
Q ss_pred CC------HhHHHHHHHHHHHHHHHhhhhhccch-hhhhhccccccccc---hHHHHHHHHHhcCCHHHHHHHhhcc
Q 002940 263 DN------AEALRMTTWMVEYFYNRVQNVIKKYS-IERHWQTLNEEAGG---MNDVLYKLFCITQDPKHLMLAHLFD 329 (863)
Q Consensus 263 Gn------~~AL~va~~~ad~~~~r~~~~~~~~~-~~~~~~~l~~E~GG---mne~L~~LY~~TGd~ryL~lA~~f~ 329 (863)
.+ ++.|+.|+++-+|..+.-..+....+ ........=++.+- +..+-+|||..|||+.||+.|+...
T Consensus 305 k~~d~~ya~~~L~~A~~~~~fa~~~~~~y~~~~~~~~~~~~~~Y~ss~~~DEl~WAAawLy~ATgd~~Yl~~a~~~~ 381 (609)
T 1ut9_A 305 KDYDPTFAADCLEKAEIAWQAALKHPDIYAEYTPGSGGPGGGPYNDDYVGDEFYWAACELYVTTGKDEYKNYLMNSP 381 (609)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHHHCTTCCBCCCCSSSSCBSCCCCBSCCHHHHHHHHHHHHHHHCCHHHHHHHHTST
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHhCcccccccccccCccCCCCCCCCCcccHHHHHHHHHHHHhCCHHHHHHHHHhh
Confidence 32 57888899999988754222111000 00000000011110 2345579999999999999998754
No 37
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A*
Probab=87.19 E-value=1.4 Score=51.12 Aligned_cols=160 Identities=12% Similarity=-0.008 Sum_probs=82.9
Q ss_pred CCCCCCCCCcCccCcccchHH-HHHHHHHHhc--------------C---cHHHHHHHHHHHHHHHHHHHhcCCccccc-
Q 002940 166 PYGGWEEPSCELRGHFVGHYL-SASALMWAST--------------H---NESLKEKMSAVVSALSACQKEIGSGYLSA- 226 (863)
Q Consensus 166 ~ygGWE~~~~~l~Gh~~GhyL-sala~~ya~T--------------g---D~~lk~k~~~~Vd~L~~~Q~~~~dGYlga- 226 (863)
-.|||-..+-..+=.+++.+- ..|.++|... + -+.+++.++.-+|.|++||... +|.+-.
T Consensus 137 l~GGwyDAGD~~K~~~p~a~t~~~L~~a~~~~~~~~~~~~~i~es~~~~~~~d~ldeikwg~D~llk~~~~~-~g~~y~~ 215 (537)
T 3gzk_A 137 CPGGWHDAGDYGKYTVPAAKAVADLLLAHEYFPAALAHVRPMRSVHRAPHLPPALEVAREEIAWLLTMQDPA-TGGVYHK 215 (537)
T ss_dssp CCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHCHHHHHTCCCSGGGSCSSCCCHHHHHHHHHHHHHHHTBCTT-TCCBBSE
T ss_pred cccceecCCCcceecccHHHHHHHHHHHHHHhhhhhhhhhccccccCcccHHHHHHHHHHHHHHHHhcccCC-CCeEEEE
Confidence 468896654333333333332 3345555421 1 2578999999999999999731 122211
Q ss_pred CCchhh----hhhhhcC---CCccchhh-HHHHHHHHHHHHHHcCC------HhHHHHHHHHHHHHHHHhhhhhccchhh
Q 002940 227 FPTEQF----DRLEALI---PVWAPYYT-IHKILAGLLDQYTYADN------AEALRMTTWMVEYFYNRVQNVIKKYSIE 292 (863)
Q Consensus 227 ~p~~~~----~r~~~l~---~~W~pyYt-~HKI~aGLld~Y~~tGn------~~AL~va~~~ad~~~~r~~~~~~~~~~~ 292 (863)
.-...| .+-++.. .....--. --.+-+.|-.+++.-++ ++.|+.|+++.+|+.+.-..... .+..
T Consensus 216 v~~~~w~g~~~~Pe~~~~~R~~~~~~t~~~~~~AAalA~as~vf~~~D~~yA~~~L~~A~~~~~fa~~~~~~~~~-~~~~ 294 (537)
T 3gzk_A 216 VTTPSFPPLDTRPEDDDAPLVLSPISYAATATFCAAMAHAALVYRPFDPALSSCCADAARRAYAWLGAHEMQPFH-NPDG 294 (537)
T ss_dssp EECSSCCCTTCCGGGCCSCEEECCBCHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHTSCCCCCC-CCTT
T ss_pred ecCCCcCCCCcCcccCCCcceEeecCCcHHHHHHHHHHHHHHhhcccCHHHHHHHHHHHHHHHHHHHhccccccc-CCcc
Confidence 000001 1111111 11100001 11233444466777777 78999999999998753221100 0000
Q ss_pred hh-h-c---cccccccchHHHHHHHHHhcCCHHHHHHHhhccc
Q 002940 293 RH-W-Q---TLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDK 330 (863)
Q Consensus 293 ~~-~-~---~l~~E~GGmne~L~~LY~~TGd~ryL~lA~~f~~ 330 (863)
.. . . -...| +..+.+|||+.|||+.||+.|+.+..
T Consensus 295 ~~~~~Y~~~~~~De---l~wAA~~Ly~aTgd~~Yl~~a~~~~~ 334 (537)
T 3gzk_A 295 ILTGEYGDAELRDE---LLWASCALLRMTGDSAWARVCEPLLD 334 (537)
T ss_dssp CCSCCCCCSCCHHH---HHHHHHHHHHHHCCGGGHHHHHHHHH
T ss_pred cccCCcCCCccchH---HHHHHHHHHHHhCCHHHHHHHHHhhh
Confidence 00 0 0 00112 34677899999999999999987643
No 38
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1
Probab=86.84 E-value=0.97 Score=51.82 Aligned_cols=188 Identities=16% Similarity=0.130 Sum_probs=99.5
Q ss_pred HHHHhcCcHHHHHHHHHHHHHHHHHHHhcCCcccccCCchhhhhhhhcCCCc----cchhhHHHHHHHHHHHHHHcC--C
Q 002940 191 LMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVW----APYYTIHKILAGLLDQYTYAD--N 264 (863)
Q Consensus 191 ~~ya~TgD~~lk~k~~~~Vd~L~~~Q~~~~dGYlga~p~~~~~r~~~l~~~W----~pyYt~HKI~aGLld~Y~~tG--n 264 (863)
.+...|||+++.++++++.+.|.+.|. .+|-++.+-...-..|....-.+ -.|| --|+-+|.++| +
T Consensus 184 ~LS~lTGd~~Y~~~a~~~~~~l~~~~~--~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~Y------EYLlK~~il~g~~d 255 (478)
T 1nxc_A 184 HLSHLSGDPVFAEKVMKIRTVLNKLDK--PEGLYPNYLNPSSGQWGQHHVSVGGLGDSFY------EYLLKAWLMSDKTD 255 (478)
T ss_dssp HHHHHHCCTHHHHHHHHHHHHHHHSCC--GGGCCCSEECTTTCCBCSCEECSSTTTHHHH------HHHHHHHHHTTTCC
T ss_pred HHHHHHCChHHHHHHHHHHHHHHhcCC--CCCccccccCCCCCCccCceeeecCCCchHH------HHHHHHHHHcCCch
Confidence 344689999999999999998887765 55655433110000111000001 1345 33667888887 4
Q ss_pred HhHHHHHHHHHHHHHHHhhhh-------hccchhhh---hhccccccccchHHHHHHHHHhcCCHHHHHHHhhcccccc-
Q 002940 265 AEALRMTTWMVEYFYNRVQNV-------IKKYSIER---HWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCF- 333 (863)
Q Consensus 265 ~~AL~va~~~ad~~~~r~~~~-------~~~~~~~~---~~~~l~~E~GGmne~L~~LY~~TGd~ryL~lA~~f~~~~~- 333 (863)
++.+++-....+-+.+.+... +....... ...-+.|-.|||--.-.++......++|+++|+.+.+.++
T Consensus 256 ~~~~~m~~~a~~~i~~~l~~~~~~~~~~v~~~~~~~~~~~~~hL~cF~gG~~aLg~~~~~~~~~~~~l~~a~~l~~tC~~ 335 (478)
T 1nxc_A 256 LEAKKMYFDAVQAIETHLIRKSSGGLTYIAEWKGGLLEHKMGHLTCFAGGMFALGADGAPEARAQHYLELGAEIARTCHE 335 (478)
T ss_dssp HHHHHHHHHHHHHHHHHTEEECTTSCEEECEEETTEEECEEETGGGGHHHHHHHTSTTSCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCCCCcEEEEeccCCcccccccchhhhhHHHHHhccccccccchHHHHHHHHHHHHHHHH
Confidence 677888777777776654210 00000000 0122457667774222333333344789999988754332
Q ss_pred --------cchhhccCCCC---CCCc-ccCCC---C-eeehhhHHHHHhCCchhhc----------cceeccccCCCCC
Q 002940 334 --------LGLLALQADDI---SGFH-SNTHI---P-IVIGSQMRYEVTGDQLHKE----------GHQLESSGTNIGH 386 (863)
Q Consensus 334 --------~~~la~~~D~l---~~~H-anthi---P-~~~G~A~~Y~~TGD~~yl~----------~h~y~tGG~s~~E 386 (863)
+.|+...-+.- .... ...|- | .+...-.+||+|||+.|++ ++.-+-+|.++-.
T Consensus 336 ~y~~~~tgl~PE~~~~~~~~~~~~~~~~~~~y~LRPE~iES~fylyR~TgD~~yre~gw~~f~ai~k~~r~~~G~a~i~ 414 (478)
T 1nxc_A 336 SYNRTYVKLGPEAFRFDGGVEAIATRQNEKYYILRPEVIETYMYMWRLTHDPKYRTWAWEAVEALESHCRVNGGYSGLR 414 (478)
T ss_dssp HHHTSSSSSCCSEEESSTTCSSBCCSGGGCCBCSCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTEETTEECCBS
T ss_pred HHHhcccCCCCeEEEeccCcccccccccccccCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhhccccccccc
Confidence 11221100000 0000 00111 2 3566777899999999999 5555566666543
No 39
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A
Probab=86.56 E-value=3.2 Score=45.85 Aligned_cols=176 Identities=9% Similarity=-0.131 Sum_probs=90.9
Q ss_pred HHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHhcCC---cccccCCchhh-----hhhhh--cCCCccchhhHHHHHHHHH
Q 002940 187 SASALMWASTHNESLKEKMSAVVSALSACQKEIGS---GYLSAFPTEQF-----DRLEA--LIPVWAPYYTIHKILAGLL 256 (863)
Q Consensus 187 sala~~ya~TgD~~lk~k~~~~Vd~L~~~Q~~~~d---GYlga~p~~~~-----~r~~~--l~~~W~pyYt~HKI~aGLl 256 (863)
+++..+.....++...+.+..+++.|.+.++ .+. +|..+. +..+ ..+.. ..-.|+-=..+ |+.-|.
T Consensus 141 aGi~~~Ll~l~~~~~~~~~~~~~~~l~~~~~-~~~~~~~w~~~~-~~~~~~~~~~~~~~~~~~~G~aHG~aG--i~~~L~ 216 (409)
T 2g0d_A 141 SGILSYLLLINDEQYDDLKILIINFLSNLTK-ENNGLISLYIKS-ENQMSQSESEMYPLGCLNMGLAHGLAG--VGCILA 216 (409)
T ss_dssp HHHHHHHTTCCCGGGHHHHHHHHHHHHHTTS-CCSSSCTTCBCG-GGSSSHHHHHHCTTCBEECCTTTSHHH--HHHHHH
T ss_pred HHHHHHHHHccCchhHHHHHHHHHHHHHHHh-cCCCCCceeecC-CccccchhhhcCCCCCccCCchhhHHH--HHHHHH
Confidence 3333333344567777788888888877654 122 333221 0000 00110 01111111122 443333
Q ss_pred HHHHHcC--CHhHHHHHHHHHHHHHHHhhh-hhcc-chh---h--h---------hhcccccccc--chHHHHHHHHHhc
Q 002940 257 DQYTYAD--NAEALRMTTWMVEYFYNRVQN-VIKK-YSI---E--R---------HWQTLNEEAG--GMNDVLYKLFCIT 316 (863)
Q Consensus 257 d~Y~~tG--n~~AL~va~~~ad~~~~r~~~-~~~~-~~~---~--~---------~~~~l~~E~G--Gmne~L~~LY~~T 316 (863)
.+| .+| +++.++.+.+..+|+.+.... .-.. ++. . . .....+--+| |+-.++..+|+.+
T Consensus 217 ~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~wp~g~~~~~~~~~~~~~~~~~~~~~WChG~~Gi~~~l~~~~~~~ 295 (409)
T 2g0d_A 217 YAH-IKGYSNEASLSALQKIIFIYEKFELERKKQFLWKDGLVADELKKEKVIREASFIRDAWCYGGPGISLLYLYGGLAL 295 (409)
T ss_dssp HHH-HHTCCCHHHHHHHHHHHHHHHHHCCCGGGTTCCCSEECHHHHHHTSCCSCCSCCCCCSSSSHHHHHHHHHHHHHHT
T ss_pred HHH-HhCCCChhHHHHHHHHHHHHHHHHhcCCCCCcCCCccccHhhhcccccccCCCCCCcCCCCCHHHHHHHHHHHHHc
Confidence 344 455 789999999999999654221 0001 111 0 0 0001111245 7888999999999
Q ss_pred CCHHHHHHHhhcccccccchhhccCCCCCCCcccCCCCee--ehhhHHHHHhCCchhhc
Q 002940 317 QDPKHLMLAHLFDKPCFLGLLALQADDISGFHSNTHIPIV--IGSQMRYEVTGDQLHKE 373 (863)
Q Consensus 317 Gd~ryL~lA~~f~~~~~~~~la~~~D~l~~~HanthiP~~--~G~A~~Y~~TGD~~yl~ 373 (863)
+|++|++.|+...+..+-. ......+.-.|...- .-....|+.|+|++|++
T Consensus 296 ~d~~~~~~a~~~~~~~~~~------~~~~~~~~LCHG~aG~~~~l~~l~~~~~~~~~~~ 348 (409)
T 2g0d_A 296 DNDYFVDKAEKILESAMQR------KLGIDSYMICHGYSGLIEICSLFKRLLNTKKFDS 348 (409)
T ss_dssp TCHHHHHHHHHHHHHHHHH------CTTCCSCCTTTSHHHHHHHHHHHHHHHCCCTTHH
T ss_pred CCHHHHHHHHHHHHHHHHh------ccCCCCCCCCChHHHHHHHHHHHHHHhCCHHHHH
Confidence 9999999998765432211 001111223344322 22556799999999877
No 40
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum}
Probab=85.64 E-value=2.3 Score=50.19 Aligned_cols=158 Identities=14% Similarity=0.116 Sum_probs=79.9
Q ss_pred CCCCCCCCCcCccCcccchH-HHHHHHHHHhc--------CcHHHHHHHHHHHHHHHHHH----Hh--------cCCccc
Q 002940 166 PYGGWEEPSCELRGHFVGHY-LSASALMWAST--------HNESLKEKMSAVVSALSACQ----KE--------IGSGYL 224 (863)
Q Consensus 166 ~ygGWE~~~~~l~Gh~~Ghy-Lsala~~ya~T--------gD~~lk~k~~~~Vd~L~~~Q----~~--------~~dGYl 224 (863)
-.|||-..+-..+=.+++.| +..|++.|... +-+.+++.++.-.|+|++|| .. .+||..
T Consensus 110 lsGGwyDAGD~~Ky~~p~a~t~~~L~w~~~e~~~~~~~~g~~~d~ldeikwg~Dyllkmq~~~~~~~~g~~y~qVgdg~~ 189 (611)
T 2yik_A 110 VSGGFHDAGDHVKFGLPEAYAASTVGWGYYEFKDQFRATGQAVHAEVILRYFNDYFMRCTFRDASGNVVAFCHQVGDGDI 189 (611)
T ss_dssp CCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHSHHHHHHTTCHHHHHHHHHHHHHHHHHTEEECTTSCEEEEEEEESCHHH
T ss_pred CCCCceeCCCCCeeccchHHHHHHHHHHHHHhHHHHhhcCCchhHHHHHHHHHHHHHHcccccccCCCCcEEEEeCCCCc
Confidence 46899765433333334443 23455444432 34789999999999999996 42 133311
Q ss_pred ccCCchhhhhhhhc---CCCc-----cchhh-HHHHHHHHHHHHHHcCC------HhHHHHHHHHHHHHHHHhhhhhccc
Q 002940 225 SAFPTEQFDRLEAL---IPVW-----APYYT-IHKILAGLLDQYTYADN------AEALRMTTWMVEYFYNRVQNVIKKY 289 (863)
Q Consensus 225 ga~p~~~~~r~~~l---~~~W-----~pyYt-~HKI~aGLld~Y~~tGn------~~AL~va~~~ad~~~~r~~~~~~~~ 289 (863)
.- ..|.+-++. +..| -|--. .-..-+.|-++++.-.+ ++.|+.|+++-+|..+.-..+....
T Consensus 190 Dh---~~w~~Pe~~~~~R~~y~v~~~~pgsd~a~~~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~~~~fA~~~~~~y~~~~ 266 (611)
T 2yik_A 190 DH---AFWGAPENDTMFRRGWFITKEKPGTDIISATAASLAINYMNFKDTDPQYAAKSLDYAKALFDFAEKNPKGVVQGE 266 (611)
T ss_dssp HT---TCCSCGGGCCSCCCEEEEBTTBCCHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCCCCCCGG
T ss_pred cc---cCCCChhhCCCCCcceeecCCCCccHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCcccCCC
Confidence 00 011111111 1111 01100 11123334345554433 5788899999998875422211111
Q ss_pred hhhhhhccccccccc---hHHHHHHHHHhcCCHHHHHHHhhcc
Q 002940 290 SIERHWQTLNEEAGG---MNDVLYKLFCITQDPKHLMLAHLFD 329 (863)
Q Consensus 290 ~~~~~~~~l~~E~GG---mne~L~~LY~~TGd~ryL~lA~~f~ 329 (863)
+... . .=++.|- +..+-+|||..|||+.||+.|+.+.
T Consensus 267 ~~~~-~--~Y~ss~~~DEl~WAAawLy~ATgd~~Yl~~a~~~~ 306 (611)
T 2yik_A 267 DGPK-G--YYGSSKWQDDYCWAAAWLYLATQNEHYLDEAFKYY 306 (611)
T ss_dssp GTTT-T--TSCCCCSHHHHHHHHHHHHHHHCCHHHHHHHHHHC
T ss_pred cccC-c--CCCCCCcccHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 0000 0 0011111 2345579999999999999998764
No 41
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2
Probab=83.23 E-value=1.9 Score=51.21 Aligned_cols=200 Identities=10% Similarity=0.026 Sum_probs=99.3
Q ss_pred EeCCCchhHHHHHHHHHHHHc------cCccchhHHHHHhcCCCCCC------------CCCCCCCCCCcCccCcccchH
Q 002940 124 RLGSDSMHWRAQQTNLEYLLM------LDVDKLVWNFRKTARLPAPG------------EPYGGWEEPSCELRGHFVGHY 185 (863)
Q Consensus 124 rL~~~~~~~~~~~~~~~yLl~------ld~drlL~~FR~~agL~~~g------------~~ygGWE~~~~~l~Gh~~Ghy 185 (863)
++.+ ..+.+.++.-+.|+-. ++.+.-...+|..+++...+ .-.|||-..+-..+-.++..|
T Consensus 123 ~I~~-~~Y~~al~~sl~ff~~QRsG~~lp~~~~~~~Wr~~s~h~D~~~~~~~~~~~~~vDl~GGwyDAGD~~Kf~~p~a~ 201 (639)
T 1clc_A 123 KIAM-NVYEDAFKTAMLGMYLLRCGTSVSATYNGIHYSHGPCHTNDAYLDYINGQHTKKDSTKGWHDAGDYNKYVVNAGI 201 (639)
T ss_dssp EECT-TTTHHHHHHHHHHHHHTBCSSCEEEEETTEEEEECCCCTTCCBCTTTTSCCCBCCCCCSBCCSSSCCEEHHHHHH
T ss_pred eech-hhhhHHHHHHHHHHHHhcCCCcCccccccCccCCCccccCCccccccCCCCccccCCCcceeCCCCCEeCccHHH
Confidence 3443 3457777777666541 22111121266666653321 256888765433443444444
Q ss_pred -HHHHHHHHHhcC----------------cHHHHHHHHHHHHHHHHHHHhcCCccccc-CCchhhh---hhhhcCCCccc
Q 002940 186 -LSASALMWASTH----------------NESLKEKMSAVVSALSACQKEIGSGYLSA-FPTEQFD---RLEALIPVWAP 244 (863)
Q Consensus 186 -Lsala~~ya~Tg----------------D~~lk~k~~~~Vd~L~~~Q~~~~dGYlga-~p~~~~~---r~~~l~~~W~p 244 (863)
+..|++.|...+ -+.+++.++.-.|+|++||...++|.+-. .-...++ +-++.. .|
T Consensus 202 t~~~L~w~~~~~~~~~~~~~~~ipes~~~~~d~ldeikwg~Dyllk~q~~~~~g~~y~~vgd~~~~~~~~Pe~~~---~~ 278 (639)
T 1clc_A 202 TVGSMFLAWEHFKDQLEPVALEIPEKNNSIPDFLDELKYEIDWILTMQYPDGSGRVAHKVSTRNFGGFIMPENEH---DE 278 (639)
T ss_dssp HHHHHHHHHHHSHHHHTTCCCSSGGGGSSSCHHHHHHHHHHHHHHTTBCTTSSCCBEEEEECSSCCCSCCGGGCC---SC
T ss_pred HHHHHHHHHHHhhhhhhccccCCccCCCcHHHHHHHHHHHHHHHHHhccccCCCeEEEEecCCCCCCCCCchhcC---CC
Confidence 345666665432 16788999999999999997322033311 0000010 001110 11
Q ss_pred hhh-------HHHHHHHHHHHHHHcCC------HhHHHHHHHHHHHHHHHhhhhhccchhhhhhccccccccc---hHHH
Q 002940 245 YYT-------IHKILAGLLDQYTYADN------AEALRMTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGG---MNDV 308 (863)
Q Consensus 245 yYt-------~HKI~aGLld~Y~~tGn------~~AL~va~~~ad~~~~r~~~~~~~~~~~~~~~~l~~E~GG---mne~ 308 (863)
.|. .-..-+.|-++++.-.+ ++.|+.|+++-+|..+.-..... .+...... .=++.+- +..+
T Consensus 279 R~~~~~~s~~a~e~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~y~-~~~~~~~g-~Y~ss~~~DEl~WA 356 (639)
T 1clc_A 279 RFFVPWSSAATADFVAMTAMAARIFRPYDPQYAEKCINAAKVSYEFLKNNPANVFA-NQSGFSTG-EYATVSDADDRLWA 356 (639)
T ss_dssp CEEEEECHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHCCSCCCC-CCTTCCSC-CCCCSCSHHHHHHH
T ss_pred ceEecCCcHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCCccC-CCcccccc-ccCCCCcchHHHHH
Confidence 110 01122333344554432 57888888888888753211000 00000000 0011110 2345
Q ss_pred HHHHHHhcCCHHHHHHHhhcc
Q 002940 309 LYKLFCITQDPKHLMLAHLFD 329 (863)
Q Consensus 309 L~~LY~~TGd~ryL~lA~~f~ 329 (863)
-+|||..|||+.||+.|+...
T Consensus 357 AawLy~ATgd~~Yl~~a~~~~ 377 (639)
T 1clc_A 357 AAEMWETLGDEEYLRDFENRA 377 (639)
T ss_dssp HHHHHHHHCCHHHHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHH
Confidence 579999999999999998764
No 42
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A*
Probab=82.63 E-value=5.3 Score=47.09 Aligned_cols=159 Identities=13% Similarity=0.076 Sum_probs=80.0
Q ss_pred CCCCCCCCCcCccCcccchHH-HHHHHHHHhc--------CcHHHHHHHHHHHHHHHHHHHhcCCcccccC-Cc-----h
Q 002940 166 PYGGWEEPSCELRGHFVGHYL-SASALMWAST--------HNESLKEKMSAVVSALSACQKEIGSGYLSAF-PT-----E 230 (863)
Q Consensus 166 ~ygGWE~~~~~l~Gh~~GhyL-sala~~ya~T--------gD~~lk~k~~~~Vd~L~~~Q~~~~dGYlga~-p~-----~ 230 (863)
-.|||-..+-..+=.+++.|- ..|++.|... +-+.+++.++.-.|.|++||. .+|.|-.- -. .
T Consensus 49 l~GGwyDAGD~~Ky~~p~a~t~~~L~w~~~e~~~~~~~~g~~~d~ldeikwg~Dyllk~~~--~~~~~y~qVGdg~~DH~ 126 (605)
T 1tf4_A 49 LTGGWYDAGDHVKFGFPMAFTATMLAWGAIESPEGYIRSGQMPYLKDNLRWVNDYFIKAHP--SPNVLYVQVGDGDADHK 126 (605)
T ss_dssp CCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHCHHHHHHTTCHHHHHHHHHHHHHHHHHTCS--BTTBEEEEESCHHHHHH
T ss_pred CCCceeECCCCCEeccchHHHHHHHHHHHHHhHHHHhhcCCcccHHHHHHHHHHHHHHhcc--CCCeEEEEeCCCCcCcc
Confidence 467997654333333344432 3444443322 346789999999999999986 33322110 00 0
Q ss_pred hhhhhhhc---CCCcc-----chhh-HHHHHHHHHHHHHHcCC------HhHHHHHHHHHHHHHHHhhhhhccchhhhhh
Q 002940 231 QFDRLEAL---IPVWA-----PYYT-IHKILAGLLDQYTYADN------AEALRMTTWMVEYFYNRVQNVIKKYSIERHW 295 (863)
Q Consensus 231 ~~~r~~~l---~~~W~-----pyYt-~HKI~aGLld~Y~~tGn------~~AL~va~~~ad~~~~r~~~~~~~~~~~~~~ 295 (863)
.|.+.|.. +..+. |--. .-..-++|-++++.-.+ ++.|+.|+++-+|..+.-+......+.....
T Consensus 127 ~w~~pe~m~~~r~~y~~~~~~pgsd~a~~~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~~~~fA~~~~g~y~~~~~~~~~Y 206 (605)
T 1tf4_A 127 WWGPAEVMPMERPSFKVDPSCPGSDVAAETAAAMAASSIVFADDDPAYAATLVQHAKQLYTFADTYRGVYSDCVPAGAFY 206 (605)
T ss_dssp CCSCGGGCCSCCCEEEEBTTBCCHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCCCGGGTSTTHHHH
T ss_pred ccCChhhCCCCCceeEecCCCCcchHHHHHHHHHHHHHhhccccCHHHHHHHHHHHHHHHHHHHHcCCCcCCCCCccccc
Confidence 12222221 11111 0001 11233344345554442 5788889999888875322111100000000
Q ss_pred ccccccccc----hHHHHHHHHHhcCCHHHHHHHhhccc
Q 002940 296 QTLNEEAGG----MNDVLYKLFCITQDPKHLMLAHLFDK 330 (863)
Q Consensus 296 ~~l~~E~GG----mne~L~~LY~~TGd~ryL~lA~~f~~ 330 (863)
+++.| +..+-+|||..|||++||+.|+.+..
T Consensus 207 ----~s~s~~~DEl~WAAawLy~ATgd~~Yl~~a~~~~~ 241 (605)
T 1tf4_A 207 ----NSWSGYQDELVWGAYWLYKATGDDSYLAKAEYEYD 241 (605)
T ss_dssp ----CCSSCSHHHHHHHHHHHHHHHCCHHHHHHHHHHGG
T ss_pred ----cCCCCCchHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 11111 23556799999999999999987543
No 43
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A*
Probab=82.57 E-value=3.7 Score=46.96 Aligned_cols=132 Identities=14% Similarity=0.062 Sum_probs=71.9
Q ss_pred HHhcCcHHHHHHHHHHHHHHHHHH--Hh-cCCcccccCCchhhhhhhhcCCCcc----chhhHHHHHHHHHHHHHHcCCH
Q 002940 193 WASTHNESLKEKMSAVVSALSACQ--KE-IGSGYLSAFPTEQFDRLEALIPVWA----PYYTIHKILAGLLDQYTYADNA 265 (863)
Q Consensus 193 ya~TgD~~lk~k~~~~Vd~L~~~Q--~~-~~dGYlga~p~~~~~r~~~l~~~W~----pyYt~HKI~aGLld~Y~~tGn~ 265 (863)
-..|||+++.++++++.+.|.+.| .. ..+|-++.+-...-.+|....-.|+ .|| -=|+-+|.++|+.
T Consensus 175 S~lTGd~~Y~~~a~~~~~~l~~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~Y------EYLlK~~il~g~~ 248 (475)
T 2ri9_A 175 SDLTGDEEYAKLSQKAESYLLKPQPSSSEPFPGLVGSSININDGQFADSRVSWNGGDDSFY------EYLIKMYVYDPKR 248 (475)
T ss_dssp HHHHSCTHHHHHHHHHHHHHHSCSSGGGCSBTTBCCSEEETTTCCBCCCCBCSSTTTHHHH------HHHHHHHHHCTTT
T ss_pred HHHhCCHHHHHHHHHHHHHHHhhccccccCCCCCcceEEeCCCCcccCCceeecCCcchHH------HHHHHHHHHcCCc
Confidence 458999999999999999998776 10 1345444321100001111011111 355 3366889999885
Q ss_pred --hHHHHHHHHHHHHHHHhhhhh---cc------chhh---hhhccccccccchHHHHHHHHHhcCCHHHHHHHhhcccc
Q 002940 266 --EALRMTTWMVEYFYNRVQNVI---KK------YSIE---RHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKP 331 (863)
Q Consensus 266 --~AL~va~~~ad~~~~r~~~~~---~~------~~~~---~~~~~l~~E~GGmne~L~~LY~~TGd~ryL~lA~~f~~~ 331 (863)
+.+++-....+=+.+.+.... .+ .... .+..-+.|-.|||--.=.+ +-++++|+++|+.+.+.
T Consensus 249 ~~~~~~m~~~a~~~i~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~hL~cF~~G~~aLgg~---~~~~~~~~~~a~~l~~t 325 (475)
T 2ri9_A 249 FETYKDRWVLAAESTIKHLKSHPKSRPDLTFLSSYSNRNYDLSSQHLTCFDGGSFLLGGT---VLDRQDFIDFGLELVDG 325 (475)
T ss_dssp THHHHHHHHHHHHHHHHHTEECCSSCTTCCEECEEETTEEECEEETGGGGHHHHHHHHHH---HHTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhccCCCCCCCceEEEeccCCccccccchHHHhHHHHHHhccc---ccccHHHHHHHHHHHHH
Confidence 666666666665554432110 00 0000 0012256777777522222 33578999999988765
Q ss_pred cc
Q 002940 332 CF 333 (863)
Q Consensus 332 ~~ 333 (863)
++
T Consensus 326 C~ 327 (475)
T 2ri9_A 326 CE 327 (475)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 44
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A
Probab=82.50 E-value=5.1 Score=44.21 Aligned_cols=128 Identities=13% Similarity=0.029 Sum_probs=77.1
Q ss_pred HHHHHHHHhc-CcHHHHHHHHHHHHHHHHHHHhcCCcccccCCc-hh-hhhh--------hhcCCCccchhhHHHHHHHH
Q 002940 187 SASALMWAST-HNESLKEKMSAVVSALSACQKEIGSGYLSAFPT-EQ-FDRL--------EALIPVWAPYYTIHKILAGL 255 (863)
Q Consensus 187 sala~~ya~T-gD~~lk~k~~~~Vd~L~~~Q~~~~dGYlga~p~-~~-~~r~--------~~l~~~W~pyYt~HKI~aGL 255 (863)
..++.++... .|+.+++.+...++.+.+.+...++|-. +|. .+ .+.. ......|.-=-.+ |...+
T Consensus 213 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~--wp~g~~~~~~~~~~~~~~~~~~~~~WChG~~G--i~~~l 288 (409)
T 2g0d_A 213 CILAYAHIKGYSNEASLSALQKIIFIYEKFELERKKQFL--WKDGLVADELKKEKVIREASFIRDAWCYGGPG--ISLLY 288 (409)
T ss_dssp HHHHHHHHHTCCCHHHHHHHHHHHHHHHHHCCCGGGTTC--CCSEECHHHHHHTSCCSCCSCCCCCSSSSHHH--HHHHH
T ss_pred HHHHHHHHhCCCChhHHHHHHHHHHHHHHHHhcCCCCCc--CCCccccHhhhcccccccCCCCCCcCCCCCHH--HHHHH
Confidence 3455555433 3899999999999998665432233321 111 00 0000 0011223211123 44556
Q ss_pred HHHHHHcCCHhHHHHHHHHHHHHHHHhhhhhccchhhhhhcccccccc--chHHHHHHHHHhcCCHHHHHHHhhc
Q 002940 256 LDQYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAG--GMNDVLYKLFCITQDPKHLMLAHLF 328 (863)
Q Consensus 256 ld~Y~~tGn~~AL~va~~~ad~~~~r~~~~~~~~~~~~~~~~l~~E~G--Gmne~L~~LY~~TGd~ryL~lA~~f 328 (863)
+.+|+.+++++.++.+.++++.+.++-.. .. ...-| +| |+-.+|..+|+.|+|++|++.|++|
T Consensus 289 ~~~~~~~~d~~~~~~a~~~~~~~~~~~~~------~~---~~~LC-HG~aG~~~~l~~l~~~~~~~~~~~~a~~~ 353 (409)
T 2g0d_A 289 LYGGLALDNDYFVDKAEKILESAMQRKLG------ID---SYMIC-HGYSGLIEICSLFKRLLNTKKFDSYMEEF 353 (409)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHCTT------CC---SCCTT-TSHHHHHHHHHHHHHHHCCCTTHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHhccC------CC---CCCCC-ChHHHHHHHHHHHHHHhCCHHHHHHHHHc
Confidence 67899999999999999999888764100 00 01112 23 6778999999999999999999874
No 45
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum}
Probab=82.20 E-value=4.9 Score=45.88 Aligned_cols=157 Identities=13% Similarity=0.144 Sum_probs=79.8
Q ss_pred CCCCCCCCCcCccCcccchH-HHHHHHHHHhc--------CcHHHHHHHHHHHHHHHHHHHhcCCccc-ccCCc-----h
Q 002940 166 PYGGWEEPSCELRGHFVGHY-LSASALMWAST--------HNESLKEKMSAVVSALSACQKEIGSGYL-SAFPT-----E 230 (863)
Q Consensus 166 ~ygGWE~~~~~l~Gh~~Ghy-Lsala~~ya~T--------gD~~lk~k~~~~Vd~L~~~Q~~~~dGYl-ga~p~-----~ 230 (863)
-.|||-..+-..+=.+++.| +..|++.|... +-+.+++.++.-.|.|++|+. .+|-| .-.-. .
T Consensus 70 lsGGwyDAGD~~Ky~~~~a~t~~~L~w~~~e~~~~~~~~~~~~d~ldeikwg~D~llk~~~--~~~~~y~qVgd~~~Dh~ 147 (466)
T 2xfg_A 70 LTGGWYDAGDHVKFNLPMSYSAAMLGWAVYEYEDAFKQSGQYNHILNNIKWACDYFIKCHP--EKDVYYYQVGDGHADHA 147 (466)
T ss_dssp CCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHCHHHHHHTTCHHHHHHHHHHHHHHHHHTCS--BTTEEEEEESCHHHHHT
T ss_pred CCCCceeCCCCCeeccccHHHHHHHHHHHHHhHHHHhcCCCchHHHHHHHHHHHHHHHhcc--CCCcEEEEeCCCCcccc
Confidence 46889765433333344444 23444444332 237899999999999999964 22211 11100 0
Q ss_pred hhhhhhhc---CCCcc-----chhhHH-HHHHHHHHHHHHcCC------HhHHHHHHHHHHHHHHHhhhhhccchhhhhh
Q 002940 231 QFDRLEAL---IPVWA-----PYYTIH-KILAGLLDQYTYADN------AEALRMTTWMVEYFYNRVQNVIKKYSIERHW 295 (863)
Q Consensus 231 ~~~r~~~l---~~~W~-----pyYt~H-KI~aGLld~Y~~tGn------~~AL~va~~~ad~~~~r~~~~~~~~~~~~~~ 295 (863)
.|.+-|.. +..+. |--..- .+-+.|-++++.-.+ ++.|+.|+++-+|..+.-... ..+... .
T Consensus 148 ~W~~pe~~~~~R~~y~i~~~~pgsd~a~e~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~--~~~~~~-~ 224 (466)
T 2xfg_A 148 WWGPAEVMPMERPSYKVDRSSPGSTVVAETSAALAIASIIFKKVDGEYSKECLKHAKELFEFADTTKSDD--GYTAAN-G 224 (466)
T ss_dssp CCSCGGGCCSCCCEEEEESSSCCHHHHHHHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHHHHHHHHCCCT--TCCTTT-T
T ss_pred ccCCcccCCCCCceeEecCCCCccHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHhcCCcC--CCCccc-c
Confidence 11111111 11110 111111 223333345555443 578889999999987643221 000000 0
Q ss_pred ccccccccc----hHHHHHHHHHhcCCHHHHHHHhhcc
Q 002940 296 QTLNEEAGG----MNDVLYKLFCITQDPKHLMLAHLFD 329 (863)
Q Consensus 296 ~~l~~E~GG----mne~L~~LY~~TGd~ryL~lA~~f~ 329 (863)
.-+.+.| +..+-+|||..|||++||+.|+.+.
T Consensus 225 --~Y~s~s~~~DEl~WAAawLy~ATgd~~Yl~~a~~~~ 260 (466)
T 2xfg_A 225 --FYNSWSGFYDELSWAAVWLYLATNDSSYLDKAESYS 260 (466)
T ss_dssp --TSCCSSCSHHHHHHHHHHHHHHHCCHHHHHHHHHTT
T ss_pred --ccCCCCCCchHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 0011111 2345579999999999999998764
No 46
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A*
Probab=79.93 E-value=5.9 Score=44.82 Aligned_cols=267 Identities=13% Similarity=0.076 Sum_probs=124.1
Q ss_pred CCCCCCCCCcCccCcccchH-HHHHHHHHHhc--------CcHHHHHHHHHHHHHHHHHHHhcCCccc-ccCCc-----h
Q 002940 166 PYGGWEEPSCELRGHFVGHY-LSASALMWAST--------HNESLKEKMSAVVSALSACQKEIGSGYL-SAFPT-----E 230 (863)
Q Consensus 166 ~ygGWE~~~~~l~Gh~~Ghy-Lsala~~ya~T--------gD~~lk~k~~~~Vd~L~~~Q~~~~dGYl-ga~p~-----~ 230 (863)
-.|||-..+-..+=.+++.| +..|++.|... +-+.+++.++.-.|.|++|+. .+|.+ .-... .
T Consensus 50 l~GGwyDAGD~~Ky~~p~a~t~~~L~w~~~e~~~~~~~~g~~~d~ldeikwg~D~llk~~~--~~~~~y~qVgd~~~Dh~ 127 (441)
T 1ia6_A 50 LTGGYHDAGDHVKFGLPQGYSAAILGWSLYEFKESFDATGNTTKMLQQLKYFTDYFLKSHP--NSTTFYYQVGEGNADHT 127 (441)
T ss_dssp CCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHCHHHHHHTTCHHHHHHHHHHHHHHHHHTCC--STTCEEEEESCHHHHTT
T ss_pred CCCCeeeCCCCCeeccchHHHHHHHHHHHHHhHHHHhhcCcHHHHHHHHHHHHHHHHHhcc--CCCcEEEEeCCCCcccc
Confidence 45899766433443444444 34555454443 237789999999999999964 22211 11111 0
Q ss_pred hhhhhhhc---CCC-cc-----chhhH-HHHHHHHHHHHHHcCC------HhHHHHHHHHHHHHHHHhhhhhccchhhhh
Q 002940 231 QFDRLEAL---IPV-WA-----PYYTI-HKILAGLLDQYTYADN------AEALRMTTWMVEYFYNRVQNVIKKYSIERH 294 (863)
Q Consensus 231 ~~~r~~~l---~~~-W~-----pyYt~-HKI~aGLld~Y~~tGn------~~AL~va~~~ad~~~~r~~~~~~~~~~~~~ 294 (863)
.|.+-|+. +.. |. |--.. -.+-+.|-+++++-.+ ++.|+.|+++-+|..+.-+. ......
T Consensus 128 ~w~~Pe~~~~~R~~~y~~~~~~p~sd~a~~~AAalAaas~vfk~~D~~yA~~~L~~A~~~~~fa~~~~g~----~~~~~~ 203 (441)
T 1ia6_A 128 YWGAPEEQTGQRPSLYKADPSSPASDILSETSAALTLMYLNYKNIDSAYATKCLNAAKELYAMGKANQGV----GNGQSF 203 (441)
T ss_dssp CCSCGGGCCSCCCCCEEEBTTBCCHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCSC----CCCTTT
T ss_pred ccCChhhCCCCCceeeEeCCCCCccHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCC----CCCCCC
Confidence 11122221 111 10 10111 1223333344554433 57888888888888653110 000000
Q ss_pred hcc--ccccccchHHHHHHHHHhcCCHHHHHHHhhcccccccchhhccCC-CCCCCcccCCCCeeehhhH-HHHHhCCch
Q 002940 295 WQT--LNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQAD-DISGFHSNTHIPIVIGSQM-RYEVTGDQL 370 (863)
Q Consensus 295 ~~~--l~~E~GGmne~L~~LY~~TGd~ryL~lA~~f~~~~~~~~la~~~D-~l~~~HanthiP~~~G~A~-~Y~~TGD~~ 370 (863)
... ...| +..+-+|||..|||++||+.|+.+..... .. ...+ ...+.|.= -.+..|... +.++++++.
T Consensus 204 Y~ss~~~DE---~~WAAa~Ly~aTgd~~Yl~~a~~~~~~~~--~~-~~~~~~~~~~~~W--d~~~~g~~~lla~~~~~~~ 275 (441)
T 1ia6_A 204 YQATSFGDD---LAWAATWLYTATNDSTYITDAEQFITLGN--TM-NENKMQDKWTMCW--DDMYVPAALRLAQITGKQI 275 (441)
T ss_dssp SCCCCSHHH---HHHHHHHHHHHHCCTHHHHHHHHHTTC---------CGGGCSSCSSS--SCCHHHHHHHHHHHHCCHH
T ss_pred CCCCCchhH---HHHHHHHHHHHhCCHHHHHHHHHHHhhhh--hc-ccccccCCCcCCc--cchHHHHHHHHHhccCcHH
Confidence 000 0112 23556799999999999999987643210 00 0000 00000100 012334333 467788888
Q ss_pred hhc--cc-e-eccccCCCCCCCCcCCccccccCCCCCccchhHHHHHHHHHHHhhcccccchHHHHHHHHHhhhcccccC
Q 002940 371 HKE--GH-Q-LESSGTNIGHFNFKSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLGIQR 446 (863)
Q Consensus 371 yl~--~h-~-y~tGG~s~~E~~~f~~p~~l~~~l~~~~~EtCat~nmlkl~~~L~~~tgD~~YaD~~ERalyN~iLa~q~ 446 (863)
|++ .. . +...++. ..|+.+.- + ..-...=-+.|+.+++..-..++++.+|.+...+.+ |=|||. +
T Consensus 276 ~~~~~~~~~~~~~~~~~-------~tp~Gl~~-~-~~WGs~~~~~~~a~l~~~~~~~~~~~~y~~~A~~ql-dYiLG~-N 344 (441)
T 1ia6_A 276 YKDAIEFNFNYWKTQVT-------TTPGGLKW-L-SNWGVLRYAAAESMVMLVYCKQNPDQSLLDLAKKQV-DYILGD-N 344 (441)
T ss_dssp HHHHHHHHHHHHHHTSC-------BCTTSCBC-C-CSTTHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHH-HHHHTC-S
T ss_pred HHHHHHHHHHHHHhhcc-------cCCCCcee-c-CCcchHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHH-HHhcCC-C
Confidence 876 11 0 1011110 00111110 0 011111112344444444455678899999887765 888885 3
Q ss_pred CCCCCcEEEeccCC
Q 002940 447 GTEPGVMIYLLPLA 460 (863)
Q Consensus 447 ~~~~g~~~Y~~PL~ 460 (863)
|. .+.|+...+
T Consensus 345 P~---~~SyvvG~G 355 (441)
T 1ia6_A 345 PA---NMSYIIGYG 355 (441)
T ss_dssp TT---CCCSBTTSS
T ss_pred CC---CceeEEecC
Confidence 32 235555443
No 47
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A*
Probab=79.74 E-value=10 Score=44.79 Aligned_cols=157 Identities=10% Similarity=0.091 Sum_probs=79.1
Q ss_pred CCCCCCCCCcCccCcccchH-HHHHHHHHHhc--------CcHHHHHHHHHHHHHHHHHHHhcCCcccc-cCCc-----h
Q 002940 166 PYGGWEEPSCELRGHFVGHY-LSASALMWAST--------HNESLKEKMSAVVSALSACQKEIGSGYLS-AFPT-----E 230 (863)
Q Consensus 166 ~ygGWE~~~~~l~Gh~~Ghy-Lsala~~ya~T--------gD~~lk~k~~~~Vd~L~~~Q~~~~dGYlg-a~p~-----~ 230 (863)
-.|||-..+-..+=.+++.| +..|++.|... +-+.+++.++.-.|.|++|+. .+|-|- -.-. .
T Consensus 49 lsGGwyDAGD~~Kf~~p~a~t~~~L~w~~~e~~~~~~~~g~~~d~ldeikwg~Dyllk~~~--~~~~~y~qVGdg~~DH~ 126 (614)
T 1g87_A 49 LTGGWYDAGDHVKFNLPMSYTSAMLAWSLYEDKDAYDKSGQTKYIMDGIKWANDYFIKCNP--TPGVYYYQVGDGGKDHS 126 (614)
T ss_dssp CCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTCC--STTCEEEEESCHHHHHT
T ss_pred CCCCeeeCCCCcEeccccHHHHHHHHHHHHHhHHHHhhCCChHHHHHHHHHHHHHHHHhcc--CCCcEEEEecCCCcCcc
Confidence 45799765433333334433 23344333222 346889999999999999964 222221 1000 0
Q ss_pred hhhhhhhcCCCccchh---------hH-HHHHHHHHHHHHHcCC------HhHHHHHHHHHHHHHHHhhhhhccchhhhh
Q 002940 231 QFDRLEALIPVWAPYY---------TI-HKILAGLLDQYTYADN------AEALRMTTWMVEYFYNRVQNVIKKYSIERH 294 (863)
Q Consensus 231 ~~~r~~~l~~~W~pyY---------t~-HKI~aGLld~Y~~tGn------~~AL~va~~~ad~~~~r~~~~~~~~~~~~~ 294 (863)
.|.+-|..... -|.| .. -.+-+.|-++++.-.+ ++.|+.|+++-+|..+.-... ....-
T Consensus 127 ~w~~pe~~~~~-r~~y~v~~~~pgsd~a~e~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~----~~~~~ 201 (614)
T 1g87_A 127 WWGPAEVMQME-RPSFKVDASKPGSAVCASTAASLASAAVVFKSSDPTYAEKCISHAKNLFDMADKAKSDA----GYTAA 201 (614)
T ss_dssp CCSCGGGCCSC-CCEEEECSSSCCHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHCCCT----TCCTT
T ss_pred ccCCcccCCCC-CcceEecCCCCccHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCCC----CCCcC
Confidence 12222221100 1112 11 1123333344554433 678889999999887642211 10000
Q ss_pred hccccccccc---hHHHHHHHHHhcCCHHHHHHHhhccc
Q 002940 295 WQTLNEEAGG---MNDVLYKLFCITQDPKHLMLAHLFDK 330 (863)
Q Consensus 295 ~~~l~~E~GG---mne~L~~LY~~TGd~ryL~lA~~f~~ 330 (863)
.. .-++.|- +..+-+|||..|||+.||+.|+.+..
T Consensus 202 ~~-~Y~ss~~~DEl~WAAawLy~ATgd~~Yl~~a~~~~~ 239 (614)
T 1g87_A 202 SG-YYSSSSFYDDLSWAAVWLYLATNDSTYLDKAESYVP 239 (614)
T ss_dssp TT-TSCCSCSHHHHHHHHHHHHHHHCCHHHHHHHHHTGG
T ss_pred cC-CcCCCCchhHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 00 0011111 23455799999999999999987653
No 48
>1r76_A Pectate lyase; A-helical structure; 2.65A {Azospirillum irakense} SCOP: a.102.5.1
Probab=79.27 E-value=34 Score=38.27 Aligned_cols=147 Identities=15% Similarity=0.158 Sum_probs=79.6
Q ss_pred CCCCCcchhhhccCchhhhhhhhhhccchHHHHHHHhhCCCCCCCCCCC--ccccccccCCCeEeCCCchhH-HHHHHHH
Q 002940 63 HLTPSDDSAWLSLMPRKILREEEQDELFSWAMLYRKIKNPGQFKVPERS--GEFLKEVSLHDVRLGSDSMHW-RAQQTNL 139 (863)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~pl~~VrL~~~~~~~-~~~~~~~ 139 (863)
-|.++.-++|++.+-|- ++ + -.-|.+.|....+.+.. +++++ ......+++.+ ++.||+ ...+..+
T Consensus 19 ~~~~~~~~~w~~y~~~s---~~-~-~~~~~a~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~----~~~~y~s~~A~~iA 87 (408)
T 1r76_A 19 SLPDTQRAAWQEYLARS---EA-Q-LSRDKASLAAELAPGQP--LPPPPAEGKGADTMPLDK----PAAWYTSKAARHVA 87 (408)
T ss_dssp SCSSSSCHHHHHHHHHH---HH-H-HHHHHHHHHHHSCTTCC--CCCCCCCSCCGGGSCSSS----CGGGGGSHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHh---HH-H-HHHHHHHHHHHhccCCC--CCCCCCCCCCccccccCC----chhhhchHHHHHHH
Confidence 46788889999987543 11 1 11356667777765331 11111 11234556655 357888 4456667
Q ss_pred HHHHccCc--cchhHHHHHhcCCCCCCCCC------------CCC---CC----CCcCccCcccchHHHHHHHHHHh-c-
Q 002940 140 EYLLMLDV--DKLVWNFRKTARLPAPGEPY------------GGW---EE----PSCELRGHFVGHYLSASALMWAS-T- 196 (863)
Q Consensus 140 ~yLl~ld~--drlL~~FR~~agL~~~g~~y------------gGW---E~----~~~~l~Gh~~GhyLsala~~ya~-T- 196 (863)
+.|+.... -.+-+|.-...-+..+...+ |.| +. ...-++=..+..-|-+|+.+|.. +
T Consensus 88 d~ll~~Q~~~GGW~kn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~DnddTa~vl~aL~rv~~~~t~ 167 (408)
T 1r76_A 88 DVIVSFQTPAGGWGKNQPRDGALRLPGQHYTGENVAKVKSGSNDLDAARDRDWHYVGTIDNDATVTEIRFLAQVVSQLAP 167 (408)
T ss_dssp HHHHHHCCTTSCCCSSCCSSSCCCCTTCCSSCCCCCCCC---------CCCCCSSSSBCGGGTTHHHHHHHHHHHHHSCG
T ss_pred HHHHHccccCCCCCCccccccccchhhhhcccccccccccccccchhhcccccCCCCCCCCchHHHHHHHHHHHHhhccc
Confidence 77774321 11111110000011111111 112 11 11123333455557788889988 7
Q ss_pred -CcHHHHHHHHHHHHHHHHHHHhcCCc
Q 002940 197 -HNESLKEKMSAVVSALSACQKEIGSG 222 (863)
Q Consensus 197 -gD~~lk~k~~~~Vd~L~~~Q~~~~dG 222 (863)
+++.+++.+.+-|++|+..|- ++|
T Consensus 168 ~~~~~y~~Ai~Rgl~wlL~mQ~--~nG 192 (408)
T 1r76_A 168 EEAAPYRDAALKGIEYLLASQF--PNG 192 (408)
T ss_dssp GGCHHHHHHHHHHHHHHHHHSC--TTS
T ss_pred cccHHHHHHHHHHHHHHHHccC--CCC
Confidence 899999999999999999999 555
No 49
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1
Probab=78.82 E-value=9.8 Score=43.82 Aligned_cols=136 Identities=13% Similarity=0.068 Sum_probs=75.8
Q ss_pred ccchHHHHHHHHHHhcCc------------HHHHHHHHHHHHHHHHHHHhcCCcccccCCchhhhhhhhcCCCccc----
Q 002940 181 FVGHYLSASALMWASTHN------------ESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAP---- 244 (863)
Q Consensus 181 ~~GhyLsala~~ya~TgD------------~~lk~k~~~~Vd~L~~~Q~~~~dGYlga~p~~~~~r~~~l~~~W~p---- 244 (863)
++-.||+++=-+|..++| +.|.+||..+-+.|..+=+. ++|- |++.-. +......|..
T Consensus 101 TtIR~LGGLLSAy~Ls~~~~~~~~~~~~~~~~lL~kA~dLadrLlpAFdT-ptgi--P~~~vn---l~~~~~~~~~~~~~ 174 (503)
T 1hcu_A 101 TNIRYLGGLLSAYDLLRGPFSSLATNQTLVNSLLRQAQTLANGLKVAFTT-PSGV--PDPTVF---FNPTVRRSGASSNN 174 (503)
T ss_dssp HHHHHHHHHHHHHHHHHTTTGGGCCCHHHHHHHHHHHHHHHHHHGGGGCS-SSSC--CCSEEE---CSSSCEECCCSEEE
T ss_pred eehhhHhHHHHHHHHccCccccccccccchHHHHHHHHHHHHHHHHhhcC-CCCC--Ccceee---cccCCCCCCCCccc
Confidence 356788888888888888 59999999999998755442 4442 222110 0000111111
Q ss_pred ---hhhHHHHHHHHHHHHHHcCCHhHHHHHHHHHHHHHHHhh--hhhccch---h---hhhhccccccccchH----HHH
Q 002940 245 ---YYTIHKILAGLLDQYTYADNAEALRMTTWMVEYFYNRVQ--NVIKKYS---I---ERHWQTLNEEAGGMN----DVL 309 (863)
Q Consensus 245 ---yYt~HKI~aGLld~Y~~tGn~~AL~va~~~ad~~~~r~~--~~~~~~~---~---~~~~~~l~~E~GGmn----e~L 309 (863)
.=+++ ++...| -++|||++..++|.+..+.+.+... ....++. + ...|.......|++. |-|
T Consensus 175 ~Ae~gsl~-LEF~~L--S~lTGd~~Y~~~a~~~~~~l~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~YEYL 251 (503)
T 1hcu_A 175 VAEIGSLV-LEWTRL--SDLTGNPQYAQLAQKGESYLLNPKGSPEAWPGLIGTFVSTSNGTFQDSSGSWSGLMDSFYEYL 251 (503)
T ss_dssp HHHHTTSH-HHHHHH--HHHHSCTHHHHHHHHHHHHHHSCCBSCCSBTTBCCSEEETTTCCBCCCEECSSTTTHHHHHHH
T ss_pred ccccccee-eehHHH--HHHhCChHHHHHHHHHHHHHHhhhcccCCCCCceeeEEeCCCCcccCCeeeecCCCccHHHHH
Confidence 11222 222232 4789999999999999999875321 0011110 0 000111112334554 566
Q ss_pred HHHHHhcCCH--HHHHHH
Q 002940 310 YKLFCITQDP--KHLMLA 325 (863)
Q Consensus 310 ~~LY~~TGd~--ryL~lA 325 (863)
.+.|-++|+. .|+++=
T Consensus 252 lK~~il~g~~~~~y~~m~ 269 (503)
T 1hcu_A 252 IKMYLYDPVAFAHYKDRW 269 (503)
T ss_dssp HHHHHHCTTTTHHHHHHH
T ss_pred HHHHHHcCCchHHHHHHH
Confidence 7889999874 676553
No 50
>2v8i_A Pectate lyase; periplasm, beta-elimination, pectin degradation; 1.50A {Yersinia enterocolitica} PDB: 2v8k_A* 2v8j_A
Probab=74.52 E-value=4.8 Score=45.57 Aligned_cols=72 Identities=13% Similarity=0.013 Sum_probs=45.7
Q ss_pred HHHHHHHHHHcCCHhHHHHHHHHHHHHHHHhhhhhccchhhh--h--hccccccccchHHHHHHHHHhcCCHHHHHHHhh
Q 002940 252 LAGLLDQYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSIER--H--WQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHL 327 (863)
Q Consensus 252 ~aGLld~Y~~tGn~~AL~va~~~ad~~~~r~~~~~~~~~~~~--~--~~~l~~E~GGmne~L~~LY~~TGd~ryL~lA~~ 327 (863)
+..++.+|+.++++...+++..|+..+- +++ +....... + ....+.- =+-.+|.+||+.|++++|+++|..
T Consensus 379 ll~~vra~~~s~D~~Lw~~~~~ma~~~~--lgd-i~~~~~~~~~~~~~~~~~sp--~lL~allEL~~atq~~~~l~lA~~ 453 (543)
T 2v8i_A 379 LISYARAYAIDNDPLLWKVARGIANDQG--LGD-IGTAPGKEVKVNMDTTNSDP--YALFALLDLYHASQVADYRKLAEK 453 (543)
T ss_dssp HHHHHHHHHHSCCHHHHHHHHHHHHHTT--CEE-CTTBTTBSCEECTTCCCCCH--HHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred hHHHHHHHHcCCCHHHHHHHHHHHhhCC--ccc-cCCCcCcccccccCCCCcCH--HHHHHHHHHHHHhCCHHHHHHHHH
Confidence 3446689999999999999999887663 111 11100000 0 0000100 023678899999999999999987
Q ss_pred c
Q 002940 328 F 328 (863)
Q Consensus 328 f 328 (863)
+
T Consensus 454 ~ 454 (543)
T 2v8i_A 454 I 454 (543)
T ss_dssp H
T ss_pred H
Confidence 4
No 51
>2yug_A Protein FRG1; spliceosome, facioscapulohumeral muscular dystrophy, FSHD1, beta-trefoil, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=69.87 E-value=36 Score=32.81 Aligned_cols=92 Identities=14% Similarity=0.150 Sum_probs=57.1
Q ss_pred eeEEEeecCCceeeeecCCC--CCccccceEEEEEecCCCCCccccccCCCCCccccCCCCCCCceEEeecCCceEEEec
Q 002940 676 TKFVLTNSNQSITMEKFPKS--GTDAALHATFRLILNDSSGSEFSSLNDFIGKSVMLEPFDSPGMLVIQHETDDELVVTD 753 (863)
Q Consensus 676 ~~~~~~~~~~~~~~~~~p~~--gt~~~~~~~fr~~~~~~~~~~~~~p~~~~g~~v~l~p~~~p~~~v~~~~~~~~l~v~~ 753 (863)
..|..+..||.+++. .|.. +......-+|.+..- .++.|+|.... +.|++-..-. .| +.+
T Consensus 34 ~~y~~A~~~G~~t~~-~~~~~~~~~~~~~E~f~l~~~-------------~~~~v~LRs~~--GkYLs~~~~G-~v-~a~ 95 (155)
T 2yug_A 34 GAYIHALDNGLFTLG-APHREVDEGPSPPEQFTAVKL-------------SDSRIALKSGY--GKYLGINSDG-LV-VGR 95 (155)
T ss_dssp SCBEEECTTSCEEEC-CCCSSSSCCCCTTTCEEEEEC-------------SSSCEEEEETT--SCBEEECSSS-BE-EEC
T ss_pred CCEEEEEcCCcEEEc-cccccccCCCCCcceEEEEEC-------------CCCEEEEEeCC--CCEEEecCCC-cE-Eec
Confidence 356666666765553 2322 444555668887742 11246666543 8888864222 23 344
Q ss_pred CCCCCCCceEEEeeccCCCCCeEEEeecCCcceEEEEe
Q 002940 754 SFIAQGSSVFHLVAGLDGGDRTVSLESETYKGCFVYTA 791 (863)
Q Consensus 754 ~~~~~~~s~f~~vpGl~g~~g~vSles~~~pg~~~~~~ 791 (863)
.....+..+|.+++= +|.+.|.+. -|+||...
T Consensus 96 a~~~g~~E~F~l~~~----~G~~aLra~--nG~yl~~~ 127 (155)
T 2yug_A 96 SDAIGPREQWEPVFQ----DGKMALLAS--NSCFIRCN 127 (155)
T ss_dssp CSSCCTTTBEEEECS----TTCCEEEET--TSCBEEEC
T ss_pred cCCCCCCCEEEEEEE----CCEEEEEeC--CCCEEEEc
Confidence 455578899999975 368999993 49999864
No 52
>2kll_A Interleukin-33; beta-trefoil, cytokine, polymorphism, secreted; NMR {Homo sapiens}
Probab=68.67 E-value=80 Score=29.79 Aligned_cols=113 Identities=17% Similarity=0.226 Sum_probs=70.3
Q ss_pred CCCcceeeeeecCCeeEEEeecCCceeeeecCCCCCccccceEEEEEecCCCCCccccccCCCCCcc--ccCCCCCCCce
Q 002940 662 YNSQLITFTQEYGNTKFVLTNSNQSITMEKFPKSGTDAALHATFRLILNDSSGSEFSSLNDFIGKSV--MLEPFDSPGML 739 (863)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~gt~~~~~~~fr~~~~~~~~~~~~~p~~~~g~~v--~l~p~~~p~~~ 739 (863)
||+|-++|.-++|.-...+. -+ .+.+.--...||.......+ -.+..+.+|+.+ .|.|- ++-.
T Consensus 20 YNDQsitFv~EdgsYeIyve---------Dl--~kdqekDkVLlryY~Sq~ps--~etgdgvdg~~LmVnlSP~--KDf~ 84 (161)
T 2kll_A 20 YNDQSITFALEDESYEIYVE---------DL--KKDEKKDKVLLSYYESQHPS--NESGDGVDGKMLMVTLSPT--KDFW 84 (161)
T ss_dssp TTTEEEEEEECSSCEEEEEE---------EC--CSCCCCCCEEEEEEECCCCT--TTSCCCCSCCCEEEEEESS--SSEE
T ss_pred ccCceEEEEEeCCcEEEEeh---------hh--ccchhcceEEEEeccCCCCc--cccCCCccccEEEEEcccc--ccee
Confidence 66666666665554333333 21 12334456788866443222 122333566666 45554 4666
Q ss_pred EEeecCCceEEEecCCCCCCCceEEEeeccCCCCCeEEEeecCCcceEEEEe
Q 002940 740 VIQHETDDELVVTDSFIAQGSSVFHLVAGLDGGDRTVSLESETYKGCFVYTA 791 (863)
Q Consensus 740 v~~~~~~~~l~v~~~~~~~~~s~f~~vpGl~g~~g~vSles~~~pg~~~~~~ 791 (863)
+-..+.+..+.+..--.+.++..|.+.--.. +..||||-.+.||.|+-+-
T Consensus 85 LHANnkehSVELqkce~~lPdQaFFvlH~~s--s~cVSFEck~~PGvfiGVK 134 (161)
T 2kll_A 85 LHANNKEHSVELHKCEKPLPDQAFFVLHNMH--SNCVSFECKTDPGVFIGVK 134 (161)
T ss_dssp EEEETTTTEEEEEECCSSCCTTTCEEEEECS--SSCEEEEESSSTTEEEEES
T ss_pred EecCCccceeEeecccCCCCcceEEEEecCC--CceEEEEecCCCceEEEec
Confidence 6666677777776666678888888874443 4799999999999999653
No 53
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=64.68 E-value=24 Score=41.39 Aligned_cols=136 Identities=14% Similarity=0.056 Sum_probs=75.4
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHhc-CCcccccCCchhhhhhhh-cCCCccchhhHHHHHHHHHHHHHHcC
Q 002940 186 LSASALMWASTHNESLKEKMSAVVSALSACQKEI-GSGYLSAFPTEQFDRLEA-LIPVWAPYYTIHKILAGLLDQYTYAD 263 (863)
Q Consensus 186 Lsala~~ya~TgD~~lk~k~~~~Vd~L~~~Q~~~-~dGYlga~p~~~~~r~~~-l~~~W~pyYt~HKI~aGLld~Y~~tG 263 (863)
+=|++.+|..|+|+++++++..+.+.+.+.+... ..||.-+-... +-+. .+..-... -...|+.+...++
T Consensus 309 ~WAA~eLy~ATgd~~YL~~a~~~a~~l~~~~~~~~~~g~~w~~~d~---~~r~~~d~a~~gl-----~~iaLl~l~~~~~ 380 (586)
T 3h7l_A 309 LLASVELFKATKETRYLEESRLWAQRLVARQMSDEQIQHFWSANQD---GSRPYFHAAEAGL-----PTIALCEYLAIED 380 (586)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHHTTEECCSSCSSEEBSSSS---SSSBCCCTTTTTH-----HHHHHHHHHHHCC
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccCCccCCCcCCCccc---CCcccccccccHH-----HHHHHHHhhhhcC
Confidence 6789999999999999999999999988777521 12332111100 0000 00011111 2233555667777
Q ss_pred C----HhHHHHHHHHHHHHHHHhhhhh------ccc----hh-h--hhhccccccc---c-ch-----H--HHHHHHHHh
Q 002940 264 N----AEALRMTTWMVEYFYNRVQNVI------KKY----SI-E--RHWQTLNEEA---G-GM-----N--DVLYKLFCI 315 (863)
Q Consensus 264 n----~~AL~va~~~ad~~~~r~~~~~------~~~----~~-~--~~~~~l~~E~---G-Gm-----n--e~L~~LY~~ 315 (863)
+ +++.+++.+.+++..+...++- ..+ .. + ........|. . |- | .++.-.|+.
T Consensus 381 d~~~~~~a~~~i~~~~d~~l~~~~~~~npfg~~~~~~~~~~~~~~~~y~~p~~~~~~y~WqGsN~~~an~a~~~~~a~~~ 460 (586)
T 3h7l_A 381 DSVQTESVKCIVNRACEFEIKISNKVTNPFGYPRQYVKGVNESKRDAFFVAHNNESGYWWQGENARLGSLATMAYLAQPH 460 (586)
T ss_dssp STTTTHHHHHHHHHHHHHHHHHHHSSCCSSCCCCEEECCTTSCCEEESSCCSSSTTSSCCCCCHHHHHHHHHHHHHSGGG
T ss_pred ChHHHHHHHHHHHHHhhhhhhhcccccCccccHHHHhhhhccccccccccccCCCCCCeeeChHHHHHHHHHHHHHHHHh
Confidence 4 5888899999997554332210 000 00 0 0001111111 1 23 2 455677889
Q ss_pred cCC----HHHHHHHhhcc
Q 002940 316 TQD----PKHLMLAHLFD 329 (863)
Q Consensus 316 TGd----~ryL~lA~~f~ 329 (863)
++| ++|++.|+.=.
T Consensus 461 ~~~~~~~~~y~~~a~~ql 478 (586)
T 3h7l_A 461 IASQEIQQQLSVFAQDAL 478 (586)
T ss_dssp CCCHHHHHHHHHHHHHHH
T ss_pred cCCchhHHHHHHHHHHhh
Confidence 999 99999998643
No 54
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A*
Probab=64.23 E-value=12 Score=42.44 Aligned_cols=122 Identities=11% Similarity=0.118 Sum_probs=61.9
Q ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHhcCCcccccCCchhhhhhhhcCCCccchhhHHHHHHHHHHHHHHcCC
Q 002940 185 YLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTYADN 264 (863)
Q Consensus 185 yLsala~~ya~TgD~~lk~k~~~~Vd~L~~~Q~~~~dGYlga~p~~~~~r~~~l~~~W~pyYt~HKI~aGLld~Y~~tGn 264 (863)
++=|++.+|..|+|+.+++++........++|... ..+. ....|--...+..+ |+. +.+++
T Consensus 213 ~~WAAa~Ly~aTgd~~Yl~~a~~~~~~~~~~~~~~-~~~~-------------~~~~Wd~~~~g~~~---lla--~~~~~ 273 (441)
T 1ia6_A 213 LAWAATWLYTATNDSTYITDAEQFITLGNTMNENK-MQDK-------------WTMCWDDMYVPAAL---RLA--QITGK 273 (441)
T ss_dssp HHHHHHHHHHHHCCTHHHHHHHHHTTC------CG-GGCS-------------SCSSSSCCHHHHHH---HHH--HHHCC
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHhhhhhccccc-ccCC-------------CcCCccchHHHHHH---HHH--hccCc
Confidence 34588889999999999999987654443343310 0000 01234333323222 222 34678
Q ss_pred HhHHHHHHHHHHHHHHHhhhhhccchhhhhhccccccccchHHHH--HHHHHhcCCHHHHHHHhhc
Q 002940 265 AEALRMTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVL--YKLFCITQDPKHLMLAHLF 328 (863)
Q Consensus 265 ~~AL~va~~~ad~~~~r~~~~~~~~~~~~~~~~l~~E~GGmne~L--~~LY~~TGd~ryL~lA~~f 328 (863)
++..+.+.+.++++......-..++.....|....- ..|.++ .-.++.+++++|+++|+.=
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~tp~Gl~~~~~WGs~~~---~~~~a~l~~~~~~~~~~~~y~~~A~~q 336 (441)
T 1ia6_A 274 QIYKDAIEFNFNYWKTQVTTTPGGLKWLSNWGVLRY---AAAESMVMLVYCKQNPDQSLLDLAKKQ 336 (441)
T ss_dssp HHHHHHHHHHHHHHHHTSCBCTTSCBCCCSTTHHHH---HHHHHHHHHHHHHHSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcccCCCCceecCCcchHHH---HHHHHHHHHHHHhhcCHHHHHHHHHHH
Confidence 888888888887765332211011110001111100 123322 2336889999999999864
No 55
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A
Probab=62.92 E-value=18 Score=40.82 Aligned_cols=118 Identities=14% Similarity=0.137 Sum_probs=65.0
Q ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHhcCCcccccCCchhhhhhhhcCCCccchhhHHHHHHHHHHHHHHcCC
Q 002940 185 YLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTYADN 264 (863)
Q Consensus 185 yLsala~~ya~TgD~~lk~k~~~~Vd~L~~~Q~~~~dGYlga~p~~~~~r~~~l~~~W~pyYt~HKI~aGLld~Y~~tGn 264 (863)
++=|++.+|..|+|+.+++++....+.+.. + .+ .....|.-...+-.++ ..+.++.
T Consensus 215 ~~WAAa~Ly~aTgd~~Yl~~~~~~~~~~~~-~-----~~-------------~~~~~Wd~~~~g~~~l-----la~~~~~ 270 (433)
T 1ks8_A 215 LVWAAAWLYRATNDNTYLNTAESLYDEFGL-Q-----NW-------------GGGLNWDSKVSGVQVL-----LAKLTNK 270 (433)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHTTG-G-----GS-------------CCCCCSSCCHHHHHHH-----HHHHHCC
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcCc-C-----cC-------------cCCcCccchhhHHHHH-----HhhccCh
Confidence 345888899999999999999876543210 0 00 0112344333221111 1245688
Q ss_pred HhHHHHHHHHHHHHHHHhhhhhccchhhhhhccccccccchH--HHHHHHHHh-cCCHHHHHHHhhcc
Q 002940 265 AEALRMTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMN--DVLYKLFCI-TQDPKHLMLAHLFD 329 (863)
Q Consensus 265 ~~AL~va~~~ad~~~~r~~~~~~~~~~~~~~~~l~~E~GGmn--e~L~~LY~~-TGd~ryL~lA~~f~ 329 (863)
++..+.+...++++.........+......|....- -.| ..+...++. +++.+|+++|+.=+
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~tp~Gl~~~~~WGs~~~---~~n~a~l~~~~~~~~~~~~~y~~~A~~ql 335 (433)
T 1ks8_A 271 QAYKDTVQSYVNYLINNQQKTPKGLLYIDMWGTLRH---AANAAFIMLEAAELGLSASSYRQFAQTQI 335 (433)
T ss_dssp HHHHHHHHHHHHHHHHTSCBCTTSCBCCCSTTHHHH---HHHHHHHHHHHHHTTSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCcCCCCceeecCCchhHH---HHHHHHHHHHHHhcCCCHHHHHHHHHHhH
Confidence 889999999998887543211111111111211100 012 344455667 89999999998643
No 56
>2v8i_A Pectate lyase; periplasm, beta-elimination, pectin degradation; 1.50A {Yersinia enterocolitica} PDB: 2v8k_A* 2v8j_A
Probab=62.52 E-value=23 Score=40.24 Aligned_cols=87 Identities=16% Similarity=0.176 Sum_probs=60.8
Q ss_pred cchHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHhcCCcccccCCchhhhhhhhcCCCccchhhHHHHHHHHHHHHHH
Q 002940 182 VGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTY 261 (863)
Q Consensus 182 ~GhyLsala~~ya~TgD~~lk~k~~~~Vd~L~~~Q~~~~dGYlga~p~~~~~r~~~l~~~W~pyYt~HKI~aGLld~Y~~ 261 (863)
..+||=+++.+|+.++|++|.+-+..|...+ +=|=|++.+.. +..-+.+.+-.-.| ++.+|++.|+.
T Consensus 375 ~~~yll~~vra~~~s~D~~Lw~~~~~ma~~~-------~lgdi~~~~~~--~~~~~~~~~~~sp~----lL~allEL~~a 441 (543)
T 2v8i_A 375 GNEFLISYARAYAIDNDPLLWKVARGIANDQ-------GLGDIGTAPGK--EVKVNMDTTNSDPY----ALFALLDLYHA 441 (543)
T ss_dssp CHHHHHHHHHHHHHSCCHHHHHHHHHHHHHT-------TCEECTTBTTB--SCEECTTCCCCCHH----HHHHHHHHHHH
T ss_pred CchhhHHHHHHHHcCCCHHHHHHHHHHHhhC-------CccccCCCcCc--ccccccCCCCcCHH----HHHHHHHHHHH
Confidence 4789999999999999999998888765543 44555543211 00011222333333 34557799999
Q ss_pred cCCHhHHHHHHHHHHHHHHH
Q 002940 262 ADNAEALRMTTWMVEYFYNR 281 (863)
Q Consensus 262 tGn~~AL~va~~~ad~~~~r 281 (863)
|++++.++.|.++++-+.++
T Consensus 442 tq~~~~l~lA~~~g~nl~~~ 461 (543)
T 2v8i_A 442 SQVADYRKLAEKIGDNIIKI 461 (543)
T ss_dssp HCCHHHHHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999988754
No 57
>2w87_A Esterase D, XYL-CBM35; plant cell WALL degradation, carbohydrate protein binding, xylan, CMB35, glucuronic acid, hydrolase; HET: GCU; 1.60A {Cellvibrio japonicus} PDB: 2w46_A
Probab=54.48 E-value=39 Score=31.69 Aligned_cols=38 Identities=18% Similarity=0.239 Sum_probs=26.2
Q ss_pred EEEEEEEeCCCCeeeEEEEeccC-CccCCCcEEEECCeec
Q 002940 542 RVTLTFSSKGSGLTTSLNLRIPT-WTSSNGAKATLNGQDL 580 (863)
Q Consensus 542 ~VtltV~~~~~~~~ftL~LRIP~-Wa~~~~~~v~VNG~~~ 580 (863)
.|+++|+.. ++...+|.+|.-. ........|.|||+.+
T Consensus 40 ~v~~~V~v~-~aG~Y~l~~ryang~~~~r~~~l~VNG~~~ 78 (139)
T 2w87_A 40 AVVWAIDAT-SSGRRTLTIRYANGGTANRNGSLVINGGSN 78 (139)
T ss_dssp EEEEEEEES-SCEEEEEEEEEECCSSSCCCEEEEETTTTT
T ss_pred EEEEEEECC-CCcEEEEEEEEECCCCCCceEEEEECCEEc
Confidence 566777654 4677888888864 4322258999999875
No 58
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A
Probab=46.57 E-value=57 Score=37.80 Aligned_cols=139 Identities=11% Similarity=0.022 Sum_probs=80.0
Q ss_pred ccchHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHhcCCcccccCCchhhhhhhhcCCCccchh------hHHHHHHH
Q 002940 181 FVGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYY------TIHKILAG 254 (863)
Q Consensus 181 ~~GhyLsala~~ya~TgD~~lk~k~~~~Vd~L~~~Q~~~~dGYlga~p~~~~~r~~~l~~~W~pyY------t~HKI~aG 254 (863)
+.-.||+++=-+|..++|+.|.+|+..+-+.|..+=+. ++|- |++.--+..-......|..-- +++ ++..
T Consensus 170 TtIR~LGGLLSAy~Lsgd~~lL~kA~dLadrLlpAFdT-ptgi--P~~~vnl~~g~~~~~~~~~~s~lAe~GSl~-LEF~ 245 (538)
T 1x9d_A 170 STIRILGGLLSAYHLSGDSLFLRKAEDFGNRLMPAFRT-PSKI--PYSDVNIGTGVAHPPRWTSDSTVAEVTSIQ-LEFR 245 (538)
T ss_dssp HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHGGGGCS-TTSC--CCSEEETTTCCEECCTTCSEEEHHHHHSSH-HHHH
T ss_pred eehhhhhhhhhHHHhcCCHHHHHHHHHHHHHHHHhhcC-CCCC--CcceeeecccccCCCCcCCCceecccccee-eeHH
Confidence 35789999989999999999999999999999765542 4442 222110000000111222111 122 2222
Q ss_pred HHHHHHHcCCHhHHHHHHHHHHHHHHHhhhhhccch---h---hhhhccc-cccccchH----HHHHHHHHhcC--CHHH
Q 002940 255 LLDQYTYADNAEALRMTTWMVEYFYNRVQNVIKKYS---I---ERHWQTL-NEEAGGMN----DVLYKLFCITQ--DPKH 321 (863)
Q Consensus 255 Lld~Y~~tGn~~AL~va~~~ad~~~~r~~~~~~~~~---~---~~~~~~l-~~E~GGmn----e~L~~LY~~TG--d~ry 321 (863)
.| -++|||++..+++.+..+.+.+.... ..++. + ...|..- ..-.|++. |-|.+.|-++| |+.|
T Consensus 246 ~L--S~LTGd~~Y~~~a~r~~~~l~~~~~~-~~GL~p~~i~~~tG~~~~~~~~~lGa~~DS~YEYLlK~~il~g~~d~~y 322 (538)
T 1x9d_A 246 EL--SRLTGDKKFQEAVEKVTQHIHGLSGK-KDGLVPMFINTHSGLFTHLGVFTLGARADSYYEYLLKQWIQGGKQETQL 322 (538)
T ss_dssp HH--HHHHCCTHHHHHHHHHHHHHHTCSCC-BTTBCCSEEETTTCCEESTTEECSSTTTHHHHHHHHHHHHHTTSCCHHH
T ss_pred HH--HHHhCCcHHHHHHHHHHHHHHhcccC-CCCCcceEEeCCCCCccCCcceeecCCccHHHHHHHHHHHHcCCchHHH
Confidence 22 47899999999999999999753211 11110 0 0001111 22345555 56668899998 7888
Q ss_pred HHHHh
Q 002940 322 LMLAH 326 (863)
Q Consensus 322 L~lA~ 326 (863)
+++=.
T Consensus 323 ~~my~ 327 (538)
T 1x9d_A 323 LEDYV 327 (538)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76543
No 59
>2w3j_A Carbohydrate binding module; sugar-binding protein, family 35, uronic acid sugars; 1.70A {Uncultured bacterium}
Probab=46.50 E-value=66 Score=30.37 Aligned_cols=38 Identities=21% Similarity=0.264 Sum_probs=26.3
Q ss_pred EEEEEEEeCCCCeeeEEEEecc-CCccCCCcEEEECCeec
Q 002940 542 RVTLTFSSKGSGLTTSLNLRIP-TWTSSNGAKATLNGQDL 580 (863)
Q Consensus 542 ~VtltV~~~~~~~~ftL~LRIP-~Wa~~~~~~v~VNG~~~ 580 (863)
.|+++|+.. ++...+|.+|.- +........|.|||+.+
T Consensus 40 ~v~~~V~v~-~aG~Y~l~~ryang~~~~r~~~l~VNG~~~ 78 (145)
T 2w3j_A 40 SIVWSLSAA-SAKTYTAQIRFGNGGTSARRATVVVNDSQI 78 (145)
T ss_dssp EEEEEEEES-SCEEEEEEEEEECCSSSCCCEEEEETTEEE
T ss_pred EEEEEEECC-CCeEEEEEEEEECCCCCCeEEEEEECCeEe
Confidence 567777654 467788888886 34322257999999875
No 60
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A*
Probab=41.36 E-value=1.2e+02 Score=34.99 Aligned_cols=141 Identities=11% Similarity=0.069 Sum_probs=80.3
Q ss_pred cchHHHHHHHHHHhc------CcHHHHHHHHHHHHHHHHHHHhcCCcccccCCchhhhhhhhcCCCccc-------hhhH
Q 002940 182 VGHYLSASALMWAST------HNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAP-------YYTI 248 (863)
Q Consensus 182 ~GhyLsala~~ya~T------gD~~lk~k~~~~Vd~L~~~Q~~~~dGYlga~p~~~~~r~~~l~~~W~p-------yYt~ 248 (863)
+-.||+++=-+|..+ +|+.|.+||..+-+.|..+=+..++|- |++.-.+..-......|.. .=++
T Consensus 101 tIR~LGGLLSAy~Ls~~~~~~~d~~lL~kA~dLadrLlpAFd~Tptgi--P~~~vnl~~g~~~~~~~~~~~s~~Ae~gSl 178 (511)
T 1dl2_A 101 TIRMLGGLLSAYHLSDVLEVGNKTVYLNKAIDLGDRLALAFLSTQTGI--PYSSINLHSGQAVKNHADGGASSTAEFTTL 178 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHGGGGSSSSSC--CCSEEETTTCCEECCSSGGGCEEHHHHSSC
T ss_pred ehhhhhhhhhHHHhcccccCCCcHHHHHHHHHHHHHHHHhhcCCCCCC--CCceeecccCCCCCCCCCCcccccccccce
Confidence 567888888888888 999999999999999986655225552 2221100000000111211 1122
Q ss_pred HHHHHHHHHHHHHcCCHhHHHHHHHHHHHHHHHhhh--hhccch---h---hhhhccccccccchH----HHHHHHHHhc
Q 002940 249 HKILAGLLDQYTYADNAEALRMTTWMVEYFYNRVQN--VIKKYS---I---ERHWQTLNEEAGGMN----DVLYKLFCIT 316 (863)
Q Consensus 249 HKI~aGLld~Y~~tGn~~AL~va~~~ad~~~~r~~~--~~~~~~---~---~~~~~~l~~E~GGmn----e~L~~LY~~T 316 (863)
+ ++...| -++|||++..++|.+..+.+.+.-.. ...++. + ...|.--....|++. |-|.+.|-++
T Consensus 179 ~-LEF~~L--S~LTGd~~Y~~~a~r~~~~l~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~lGa~~DS~YEYLlK~~il~ 255 (511)
T 1dl2_A 179 Q-MEFKYL--AYLTGNRTYWELVERVYEPLYKNNDLLNTYDGLVPIYTFPDTGKFGASTIRFGSRGDSFYEYLLKQYLLT 255 (511)
T ss_dssp H-HHHHHH--HHHHTCHHHHHHHHTTHHHHHHHHTHHHHHTTCCBSEECTTTCCBCSCCBCSSTTTHHHHHHHHHHHHHH
T ss_pred e-eeHHHH--HHHHCChHHHHHHHHHHHHHHhcccccCCCCCCcceEEcCCCCCccCCeeeecCCCCcHHHHHHHHHHhc
Confidence 2 222232 47899999999999999998764310 111210 0 001111112335554 5667888889
Q ss_pred CCHHHHHHHhh
Q 002940 317 QDPKHLMLAHL 327 (863)
Q Consensus 317 Gd~ryL~lA~~ 327 (863)
+|+.|+++=+.
T Consensus 256 ~d~~y~~m~~~ 266 (511)
T 1dl2_A 256 HETLYYDLYRK 266 (511)
T ss_dssp CCHHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 99999876443
No 61
>1gxm_A Pectate lyase; mechanism, elimination; 1.32A {Cellvibrio cellulosa} SCOP: a.102.5.1 PDB: 1gxn_A 1gxo_A*
Probab=35.99 E-value=95 Score=33.76 Aligned_cols=97 Identities=15% Similarity=0.100 Sum_probs=61.7
Q ss_pred ccCcccchHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHhcCCcccccCCchhhhhhhhcCCCccchhhHHHHHHHHH
Q 002940 177 LRGHFVGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLL 256 (863)
Q Consensus 177 l~Gh~~GhyLsala~~ya~TgD~~lk~k~~~~Vd~L~~~Q~~~~dGYlga~p~~~~~r~~~l~~~W~pyYt~HKI~aGLl 256 (863)
++=..+..-|-+|+.+|..++++++++.+++-|++|+..|- ++|=.++|...- ..+ ....|+..- +++.++
T Consensus 71 ~DnddTa~vl~~Larv~~~~~~~~y~~Ai~Rgl~wlL~mQ~--~nGGWpqFdpd~-~~Y----l~~IpFnDD--vtarvL 141 (332)
T 1gxm_A 71 IDNGATITEMVFLAEVYKSGGNTKYRDAVRKAANFLVNSQY--STGALPQFYPLK-GGY----SDHATFNDN--GMAYAL 141 (332)
T ss_dssp CGGGTTHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC--TTSCCBSEESCC-SGG----GGSEECGGG--HHHHHH
T ss_pred ccCccHHHHHHHHHHHhccccchHHHHHHHHHHHHHHhccC--CCCCccccCCCc-ccc----cccCCcchH--HHHHHH
Confidence 34344566678889999999999999999999999999999 554333432110 000 112233321 444444
Q ss_pred HHHHHcCC---------------HhHHHHHHHHHHHHHHHh
Q 002940 257 DQYTYADN---------------AEALRMTTWMVEYFYNRV 282 (863)
Q Consensus 257 d~Y~~tGn---------------~~AL~va~~~ad~~~~r~ 282 (863)
......+. +++...+.|..+|+.+..
T Consensus 142 elL~~~~~~~~~~~~~~~~~~~~~~~~~av~Rgid~Llk~Q 182 (332)
T 1gxm_A 142 TVLDFAANKRAPFDTDVFSDNDRTRFKTAVTKGTDYILKAQ 182 (332)
T ss_dssp HHHHHHHTTCTTSCSTTSCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHhccCCccccccccchhhhhHHHHHHHHHHHHHhh
Confidence 44333322 677888999999998653
No 62
>2wry_A IL-1 beta, interleukin-1BETA; immune system, pyrogen, mitogen, inflammatory response; 1.58A {Gallus gallus} PDB: 3nj5_A
Probab=33.24 E-value=28 Score=34.06 Aligned_cols=37 Identities=24% Similarity=0.455 Sum_probs=26.6
Q ss_pred eEEEeeccCCCCCeEEEeecCCcceEEEEeeccCCCCcEEEE
Q 002940 762 VFHLVAGLDGGDRTVSLESETYKGCFVYTAVNLQSSESTKLG 803 (863)
Q Consensus 762 ~f~~vpGl~g~~g~vSles~~~pg~~~~~~~~~~~g~~~~l~ 803 (863)
-||-..|. ..+.+|||+.+||||+-.. ...+.-|.|.
T Consensus 110 Fyr~~~G~---~~~~tfESaa~PgWFI~Ts--~~~~qPV~Lt 146 (162)
T 2wry_A 110 FYRLDSPT---EGTTRFESAAFPGWFICTS--LQPRQPVGIT 146 (162)
T ss_dssp EEEEEETT---TTEEEEEESSSTTCEEEBC--SSSSEECEEE
T ss_pred EEEecCCC---CCceEEEeccCCCcEEEcC--CCCCeEEEee
Confidence 44555664 3699999999999999753 2346677776
No 63
>2nvh_A IL-1 beta, interleukin-1 beta, catabolin; water, hydration, protein folding, cytokine; 1.53A {Homo sapiens} SCOP: b.42.1.2 PDB: 1iob_A 1itb_A 2i1b_A 2kh2_A 1i1b_A 4i1b_A 5i1b_A 6i1b_A 7i1b_A 9ilb_A 4dep_A* 3o4o_A* 1twm_A 1twe_A 1s0l_A 1too_A 1t4q_A 41bi_A 21bi_A 1hib_A ...
Probab=32.14 E-value=20 Score=34.88 Aligned_cols=28 Identities=18% Similarity=0.347 Sum_probs=21.9
Q ss_pred CeEEEeecCCcceEEEEeeccCCCCcEEEE
Q 002940 774 RTVSLESETYKGCFVYTAVNLQSSESTKLG 803 (863)
Q Consensus 774 g~vSles~~~pg~~~~~~~~~~~g~~~~l~ 803 (863)
.+.+|||+.+||||+-.. ...+.-|.|.
T Consensus 108 ~~~~fESaa~PgWFI~Ts--~~~~qPV~Lt 135 (153)
T 2nvh_A 108 NKLEFESAQFPNWYISTS--QAENMPVFLG 135 (153)
T ss_dssp TEEEEEESSSTTCEEEBC--SSTTEECEEE
T ss_pred CeeEEEeccCCCcEEecC--CCCCeEEEee
Confidence 589999999999999753 2346677776
No 64
>2ila_A Interleukin-1 alpha; cytokine; 2.30A {Homo sapiens} SCOP: b.42.1.2 PDB: 2kki_A 2l5x_A
Probab=31.34 E-value=19 Score=35.07 Aligned_cols=26 Identities=15% Similarity=0.016 Sum_probs=21.3
Q ss_pred CeEEEeecCCcceEEEEeeccCCCCcEEEE
Q 002940 774 RTVSLESETYKGCFVYTAVNLQSSESTKLG 803 (863)
Q Consensus 774 g~vSles~~~pg~~~~~~~~~~~g~~~~l~ 803 (863)
.+.+|||+.+||||+-.. .+.-|.|.
T Consensus 114 ~~~~FESaa~PgWFI~Ts----~~qPV~Lt 139 (155)
T 2ila_A 114 TKNYFTSVAHPNLFIATK----QDYWVCLA 139 (155)
T ss_pred CeeEEEeccCCCcEEEcC----CCCCeEee
Confidence 589999999999999753 16677776
No 65
>1md6_A Interleukin 1 family, member 5 (delta); beta triple, alpha helix, immune system; 1.60A {Mus musculus} SCOP: b.42.1.2
Probab=30.85 E-value=20 Score=34.87 Aligned_cols=27 Identities=33% Similarity=0.562 Sum_probs=21.4
Q ss_pred eEEEeecCCcceEEEEeeccCCCCcEEEE
Q 002940 775 TVSLESETYKGCFVYTAVNLQSSESTKLG 803 (863)
Q Consensus 775 ~vSles~~~pg~~~~~~~~~~~g~~~~l~ 803 (863)
+.+|||+.+||||+-.. ...+.-|.|.
T Consensus 107 ~~tfESaa~PgWFI~Ts--~~~~qPV~Lt 133 (154)
T 1md6_A 107 TSSFESAAYPGWFLCTS--PEADQPVRLT 133 (154)
T ss_dssp CEEEEESSSTTCEEEBC--SSSSEECEEE
T ss_pred eEEEEeccCCCcEEecC--CCCCeEEEee
Confidence 89999999999999753 2346677776
No 66
>2w47_A Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1.40A {Clostridium thermocellum} PDB: 2w1w_A
Probab=29.68 E-value=1.6e+02 Score=27.36 Aligned_cols=38 Identities=18% Similarity=0.210 Sum_probs=23.2
Q ss_pred EEEEEEEeCCCCeeeEEEEeccC-CccCCCcEEEECCeec
Q 002940 542 RVTLTFSSKGSGLTTSLNLRIPT-WTSSNGAKATLNGQDL 580 (863)
Q Consensus 542 ~VtltV~~~~~~~~ftL~LRIP~-Wa~~~~~~v~VNG~~~ 580 (863)
.|+++|+.. ++...+|.||.=. -.......|.|||+.+
T Consensus 41 ~v~~~V~v~-~aG~Y~l~~ryan~~~~~~~~~l~VNG~~~ 79 (144)
T 2w47_A 41 YIEWNVNAP-SSGSYALIFRYANGTTANRPMRITVNGNIV 79 (144)
T ss_dssp EEEEEEEES-SSEEEEEEEEEECCSSSCCCEEEEETTEEE
T ss_pred EEEEEEECC-CCcEEEEEEEEECCCCCCeEEEEEECCeEe
Confidence 566666654 4566777777622 1111257899999863
No 67
>1ilt_A Interleukin-1 receptor antagonist; cytokine; 2.00A {Homo sapiens} SCOP: b.42.1.2 PDB: 1ilr_1 1ira_X* 2irt_A 1irp_A
Probab=27.11 E-value=23 Score=34.34 Aligned_cols=27 Identities=33% Similarity=0.519 Sum_probs=21.0
Q ss_pred eEEEeecCCcceEEEEeeccCCCCcEEEE
Q 002940 775 TVSLESETYKGCFVYTAVNLQSSESTKLG 803 (863)
Q Consensus 775 ~vSles~~~pg~~~~~~~~~~~g~~~~l~ 803 (863)
+.+|||+.+||||+-.. ...+.-|.|.
T Consensus 108 ~~~fESaa~PgWFI~Ts--~~~~~PV~Lt 134 (152)
T 1ilt_A 108 TTSFESAACPGWFLCTA--MEADQPVSLT 134 (152)
T ss_pred ceEEEeccCCCcEEEcC--CcCCeEEEee
Confidence 89999999999999753 2235567776
No 68
>3llp_A Fascin; beta-trefoil, actin bundling protein, cancer, metastasis, CE migration, acetylation, actin-binding, cytoplasm, phosphopr protein binding; HET: EPE; 1.80A {Homo sapiens} PDB: 1dfc_A* 3lna_A* 3o8k_A* 3p53_A* 4gov_A 4goy_A 4gp3_A 4gp0_A*
Probab=26.59 E-value=5.3e+02 Score=29.38 Aligned_cols=51 Identities=16% Similarity=0.107 Sum_probs=37.5
Q ss_pred CCCceEEeecCCceEEEecCCCCCCCceEEEeeccCCCCCeEEEeecCCcceEEEEe
Q 002940 735 SPGMLVIQHETDDELVVTDSFIAQGSSVFHLVAGLDGGDRTVSLESETYKGCFVYTA 791 (863)
Q Consensus 735 ~p~~~v~~~~~~~~l~v~~~~~~~~~s~f~~vpGl~g~~g~vSles~~~pg~~~~~~ 791 (863)
.-|.|+.-.+..-.|.+..+...+.+.+|.++- ..+.|+|++. .|+||...
T Consensus 226 ~~GkYL~~~g~~g~L~~~~~~~~g~~E~F~L~~----~~~qVaL~s~--ngkyVsa~ 276 (493)
T 3llp_A 226 CEGRYLAPSGPSGTLKAGKATKVGKDELFALEQ----SCAQVVLQAA--NERNVSTR 276 (493)
T ss_dssp TTSCBEEEETTTTEEEECC---CCGGGCEEEEE----CCCEEEEECT--TSCEEECC
T ss_pred CCCCEEeEECCCCeEEeccCCCCCCceEEEEEe----CCCEEEEEec--CCcEEEec
Confidence 667888887766556555556667799999996 3689999987 89999753
No 69
>3ltq_A Interleukin-1 beta; lanthanide binding TAG, LBT, terbium, IL1B, cytokine, inflam response, mitogen, pyrogen, secreted; 2.10A {Homo sapiens} SCOP: b.42.1.2
Probab=21.98 E-value=39 Score=33.42 Aligned_cols=28 Identities=18% Similarity=0.347 Sum_probs=21.3
Q ss_pred CeEEEeecCCcceEEEEeeccCCCCcEEEE
Q 002940 774 RTVSLESETYKGCFVYTAVNLQSSESTKLG 803 (863)
Q Consensus 774 g~vSles~~~pg~~~~~~~~~~~g~~~~l~ 803 (863)
.+.+|||+.+||+|+-.. ...+..|.|.
T Consensus 126 s~stFESaa~PGWFI~Ts--~~~~qPV~Lt 153 (171)
T 3ltq_A 126 NKLEFESAQFPNWYISTS--QAENMPVFLG 153 (171)
T ss_dssp TEEEEEESSSTTCEEEBC--SSTTEECEEE
T ss_pred CceEEEecCCCCCEEeec--CCCCeeEEee
Confidence 478999999999999753 2345567776
No 70
>1dm9_A Hypothetical 15.5 KD protein in MRCA-PCKA intergenic region; heat shock proteins, protein-RNA interactions, ribosome, structural genomics; 2.00A {Escherichia coli} SCOP: d.66.1.3 PDB: 3bbu_A
Probab=21.38 E-value=1e+02 Score=28.80 Aligned_cols=34 Identities=24% Similarity=0.141 Sum_probs=23.6
Q ss_pred EEEECCeecCCCCCCCEEEEEeecCCCCEEEEEecceeEEEec
Q 002940 572 KATLNGQDLPLPSPGNFLSVTKTWSSDDKLTIQLPLTLRTEAI 614 (863)
Q Consensus 572 ~v~VNG~~~~~~~~ggy~~I~R~Wk~GD~I~L~LPm~lr~~~~ 614 (863)
.|+|||+.+.. + + .-+.||+|+|.++-..+.+..
T Consensus 35 ~V~VNG~~vk~---s-~-----~V~~GD~I~I~~~~~~~~~~v 68 (133)
T 1dm9_A 35 KVHYNGQRSKP---S-K-----IVELNATLTLRQGNDERTVIV 68 (133)
T ss_dssp CEEETTEECCT---T-C-----BCCTTCEEEEEETTEEEEEEE
T ss_pred cEEECCEEcCC---C-C-----EeCCCCEEEEEeCCceeeEEE
Confidence 68999997532 1 2 126899999999876665443
No 71
>2x2s_A Agglutinin, agglutinin SSA; fungal lectin, beta-trefoil domain, cell adhesion; 1.60A {Sclerotinia sclerotiorum} PDB: 2x2t_A*
Probab=20.18 E-value=1.9e+02 Score=27.79 Aligned_cols=45 Identities=4% Similarity=-0.025 Sum_probs=33.9
Q ss_pred CCCceEEEee-ccCCCCCeEEEeecCCcceEEEEe-eccCCCCcEEEE
Q 002940 758 QGSSVFHLVA-GLDGGDRTVSLESETYKGCFVYTA-VNLQSSESTKLG 803 (863)
Q Consensus 758 ~~~s~f~~vp-Gl~g~~g~vSles~~~pg~~~~~~-~~~~~g~~~~l~ 803 (863)
.++..|||.| |-+| +|+..+|++..+|.=+-+. ....+|.+|..-
T Consensus 92 ~~~~rWrI~~~G~~~-~G~f~I~nk~~s~~vldV~~~~t~~GAdVi~~ 138 (153)
T 2x2s_A 92 DPSARWTIKPATTHQ-YEVFTINNKVSELGQLTVKDYSTHSGADVLSA 138 (153)
T ss_dssp CGGGCEEEEESCC---CCCEEEEESSGGGCEEEEGGGCCSTTCBEEEE
T ss_pred CccceEEEEeccccC-cceEEEecccCCCceEEeccCCCCCCceEEEe
Confidence 3789999998 9899 7999999999999888643 444567777554
Done!