Your job contains 1 sequence.
>002944
MANGTDSEEKFVVLSKIRVGLKREFEFALKVQSEICGSLGRTRARKVQSNVDSGCVLGPP
EVKKLKTYESRKKRKRQEQSVVVKETEDKREEEVKSDVFDVINERERPIREKESKDDSEN
MGVGERGALMNVEEVKVVSERREEGNDEFGKVVIGVEEEKKNECDEVLMNVEENKYGELD
GMGGSARTEEEKNECGEPVVGVEEERRNECNQVLTNVEENEHSEVDREKAENDLIGEVKN
EFEEVVAVVEEEKKDESDRVAMDVEEVKCEEVGLGKEYEPGRVQMEMDEEKKNDIERELV
ENGVLESSMVGKHSSTLCNGESNVAKSVAVDGNDEGKTVNVVVERPLRRFTRSLLQQKVE
LAKGSLSKDGGKRSDVTEVANDGVGGPVKQETVMKPRKVMRKFYSKLKNFLESGILEGMS
VMYIRGSKVKGPGVSGLRGVVKGSGISCFCDDCKGNQVVTPAVFELHAGSSNKRPPEYIY
LENGKTLRDIMNVCKDSPLETLEKAVRMVLGSSSMKKANFCLNCRVSFSNAGVEELMLLC
KSCVELKESQAGSAEIKEPLSHSSEMEPQPPSVELEESPAPSGELTDTSNRSPEPNSAQT
SSHSKMKSSSVKSHGKITRKDLRMHKLVFEEGGLEDGAEVGYFVRGEKFLVGYKKGFGIL
CTCCNSEVSPSQFEAHAGWASRRKPFQHIYTSNGVSLHELSIKLSLERPFSSKENDDLCG
ICMDGGDLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYCMNTFQKEKFVEYNANARAAGRI
EGVDPFAQMVSRCIRIVQTPDTELGGCVLCRGRDFCKSRFGRRTVILCDQCEREYHVGCL
KDHGMEDLQVPQLLVYDTISFWL
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 002944
(863 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2040550 - symbol:AT2G36720 "AT2G36720" species... 831 3.1e-108 2
TAIR|locus:2147391 - symbol:AT5G36740 species:3702 "Arabi... 247 3.1e-20 3
TAIR|locus:2832118 - symbol:AT5G36670 species:3702 "Arabi... 247 3.3e-20 3
TAIR|locus:2201021 - symbol:AT1G05380 "AT1G05380" species... 258 5.3e-18 3
TAIR|locus:2086395 - symbol:ROS4 "AT3G14980" species:3702... 229 4.4e-14 3
UNIPROTKB|C9JFR1 - symbol:AIRE "Autoimmune regulator" spe... 185 3.0e-13 1
TAIR|locus:2168088 - symbol:AT5G59830 "AT5G59830" species... 212 3.0e-13 2
TAIR|locus:2173179 - symbol:AT5G13660 "AT5G13660" species... 206 4.3e-13 1
ZFIN|ZDB-GENE-071008-4 - symbol:aire "autoimmune regulato... 203 8.4e-13 1
UNIPROTKB|E1BIC4 - symbol:AIRE "Uncharacterized protein" ... 177 8.0e-12 2
UNIPROTKB|C9JL37 - symbol:AIRE "Autoimmune regulator" spe... 185 2.6e-11 1
UNIPROTKB|O43918 - symbol:AIRE "Autoimmune regulator" spe... 184 3.5e-11 2
UNIPROTKB|I3LD78 - symbol:I3LD78 "Uncharacterized protein... 172 8.3e-11 3
UNIPROTKB|I3LQA6 - symbol:AIRE "Uncharacterized protein" ... 184 1.2e-10 1
UNIPROTKB|I3LF49 - symbol:I3LF49 "Uncharacterized protein... 172 1.4e-10 2
UNIPROTKB|F1PPM4 - symbol:AIRE "Uncharacterized protein" ... 184 2.4e-10 2
RGD|1311139 - symbol:Aire "autoimmune regulator" species:... 175 2.7e-10 2
TAIR|locus:2178828 - symbol:AT5G58610 "AT5G58610" species... 184 3.1e-10 1
ZFIN|ZDB-GENE-030131-2773 - symbol:trim33 "tripartite mot... 174 3.5e-10 2
UNIPROTKB|F1NMG7 - symbol:F1NMG7 "Uncharacterized protein... 185 3.7e-10 2
ZFIN|ZDB-GENE-030131-5913 - symbol:trim24 "tripartite mot... 173 4.3e-10 2
UNIPROTKB|F1SNJ6 - symbol:LOC100620590 "Uncharacterized p... 167 4.8e-10 2
UNIPROTKB|I3LBT0 - symbol:I3LBT0 "Uncharacterized protein... 172 6.7e-10 2
UNIPROTKB|F1PLN6 - symbol:TRIM33 "Uncharacterized protein... 170 7.8e-10 2
MGI|MGI:1338803 - symbol:Aire "autoimmune regulator (auto... 177 1.1e-09 2
UNIPROTKB|E7EN20 - symbol:TRIM33 "E3 ubiquitin-protein li... 168 1.3e-09 2
UNIPROTKB|H0YF52 - symbol:TRIM66 "Tripartite motif-contai... 166 1.9e-09 1
UNIPROTKB|H0Y612 - symbol:TRIM33 "E3 ubiquitin-protein li... 168 1.9e-09 2
UNIPROTKB|F1MNE1 - symbol:TRIM33 "Uncharacterized protein... 170 2.2e-09 2
UNIPROTKB|F1P5H8 - symbol:TRIM33 "Uncharacterized protein... 169 2.9e-09 2
UNIPROTKB|Q9UPN9 - symbol:TRIM33 "E3 ubiquitin-protein li... 168 3.5e-09 2
RGD|1307339 - symbol:Trim33 "tripartite motif-containing ... 168 4.5e-09 2
UNIPROTKB|F1NBP6 - symbol:F1NBP6 "Uncharacterized protein... 183 5.1e-09 3
MGI|MGI:2137357 - symbol:Trim33 "tripartite motif-contain... 168 5.9e-09 2
UNIPROTKB|J9NRN3 - symbol:CHD5 "Uncharacterized protein" ... 152 9.3e-09 2
UNIPROTKB|F1NRM1 - symbol:F1NRM1 "Uncharacterized protein... 171 9.3e-09 2
UNIPROTKB|J3QQU3 - symbol:PHF12 "PHD finger protein 12" s... 142 1.2e-08 1
UNIPROTKB|F1PT90 - symbol:TRIM66 "Uncharacterized protein... 177 1.4e-08 2
RGD|1582725 - symbol:Chd5 "chromodomain helicase DNA bind... 152 2.8e-08 2
DICTYBASE|DDB_G0277341 - symbol:DDB_G0277341 "PHD zinc fi... 158 6.3e-08 2
UNIPROTKB|K7EQP5 - symbol:PHF12 "PHD finger protein 12" s... 135 6.7e-08 1
UNIPROTKB|F1RGC2 - symbol:TRIM66 "Uncharacterized protein... 170 7.5e-08 2
ZFIN|ZDB-GENE-121031-4 - symbol:chd3 "chromodomain helica... 134 8.9e-08 3
ZFIN|ZDB-GENE-040724-145 - symbol:trim66 "tripartite moti... 165 1.2e-07 2
UNIPROTKB|D4AB82 - symbol:Trim24 "Protein Trim24" species... 164 1.4e-07 3
UNIPROTKB|K7EJ43 - symbol:PHF12 "PHD finger protein 12" s... 144 1.4e-07 1
CGD|CAL0003038 - symbol:orf19.6506 species:5476 "Candida ... 141 1.5e-07 3
UNIPROTKB|F1P4C7 - symbol:TRIM24 "Uncharacterized protein... 165 1.6e-07 2
UNIPROTKB|B5MCJ9 - symbol:TRIM66 "Tripartite motif-contai... 166 1.6e-07 2
MGI|MGI:2152406 - symbol:Trim66 "tripartite motif-contain... 167 2.0e-07 2
UNIPROTKB|E2RNG5 - symbol:LOC609728 "Uncharacterized prot... 169 2.1e-07 3
ZFIN|ZDB-GENE-050417-474 - symbol:zgc:113411 "zgc:113411"... 153 2.5e-07 2
UNIPROTKB|O15164 - symbol:TRIM24 "Transcription intermedi... 167 3.4e-07 3
RGD|1595847 - symbol:Trim66 "tripartite motif-containing ... 167 3.6e-07 2
UNIPROTKB|H7C2H0 - symbol:CHD3 "Chromodomain-helicase-DNA... 145 3.7e-07 4
UNIPROTKB|F1LPP8 - symbol:Chd3 "Protein Chd3" species:101... 144 4.2e-07 5
UNIPROTKB|F2Z2R5 - symbol:CHD5 "Chromodomain-helicase-DNA... 152 5.4e-07 3
UNIPROTKB|F1MP49 - symbol:TRIM24 "Uncharacterized protein... 165 5.5e-07 3
UNIPROTKB|F1MD96 - symbol:F1MD96 "Uncharacterized protein... 172 7.8e-07 3
UNIPROTKB|O15016 - symbol:TRIM66 "Tripartite motif-contai... 166 9.0e-07 3
SGD|S000004680 - symbol:RCO1 "Essential subunit of the hi... 146 1.1e-06 2
FB|FBgn0023395 - symbol:Chd3 "Chd3" species:7227 "Drosoph... 150 1.1e-06 1
ZFIN|ZDB-GENE-030131-3876 - symbol:phf12a "PHD finger pro... 156 1.2e-06 2
UNIPROTKB|E2R1M3 - symbol:CHD5 "Uncharacterized protein" ... 152 1.6e-06 1
UNIPROTKB|H0Y9U6 - symbol:WHSC1 "Histone-lysine N-methylt... 140 1.8e-06 1
ZFIN|ZDB-GENE-041111-187 - symbol:chd4a "chromodomain hel... 156 1.9e-06 2
UNIPROTKB|Q12873 - symbol:CHD3 "Chromodomain-helicase-DNA... 145 2.1e-06 4
MGI|MGI:109275 - symbol:Trim24 "tripartite motif-containi... 160 2.3e-06 3
UNIPROTKB|E9PG89 - symbol:CHD3 "Chromodomain-helicase-DNA... 145 2.3e-06 4
UNIPROTKB|Q5TH12 - symbol:ZMYND8 "Protein kinase C-bindin... 126 2.5e-06 1
UNIPROTKB|Q8TDI0 - symbol:CHD5 "Chromodomain-helicase-DNA... 152 2.5e-06 3
FB|FBgn0029861 - symbol:CG3815 species:7227 "Drosophila m... 145 3.5e-06 2
UNIPROTKB|Q9HB58 - symbol:SP110 "Sp110 nuclear body prote... 143 3.9e-06 2
UNIPROTKB|F1NH78 - symbol:F1NH78 "Uncharacterized protein... 153 4.2e-06 2
UNIPROTKB|F1NH79 - symbol:CHD4 "Uncharacterized protein" ... 153 4.8e-06 2
UNIPROTKB|G3N175 - symbol:G3N175 "Uncharacterized protein... 135 5.0e-06 1
FB|FBgn0023097 - symbol:bon "bonus" species:7227 "Drosoph... 148 6.4e-06 2
FB|FBgn0262519 - symbol:Mi-2 species:7227 "Drosophila mel... 151 6.5e-06 3
MGI|MGI:1344380 - symbol:Chd4 "chromodomain helicase DNA ... 152 7.3e-06 3
UNIPROTKB|J9NUG7 - symbol:WHSC1 "Uncharacterized protein"... 140 7.7e-06 4
UNIPROTKB|F1PK46 - symbol:WHSC1 "Uncharacterized protein"... 140 7.8e-06 4
ZFIN|ZDB-GENE-030131-4532 - symbol:chd4b "chromodomain he... 155 8.0e-06 2
UNIPROTKB|C9J9G2 - symbol:PHF12 "PHD finger protein 12" s... 144 8.3e-06 2
ZFIN|ZDB-GENE-030131-2581 - symbol:whsc1 "Wolf-Hirschhorn... 143 8.3e-06 3
WB|WBGene00002637 - symbol:let-418 species:6239 "Caenorha... 134 9.3e-06 3
UNIPROTKB|G5EBZ4 - symbol:let-418 "Protein let-418" speci... 134 9.3e-06 3
UNIPROTKB|G3MZ32 - symbol:G3MZ32 "Uncharacterized protein... 130 9.4e-06 1
UNIPROTKB|F1N544 - symbol:CHD3 "Uncharacterized protein" ... 145 1.0e-05 4
UNIPROTKB|F1N3F6 - symbol:CHD4 "Uncharacterized protein" ... 152 1.2e-05 3
UNIPROTKB|Q2TAK2 - symbol:PHF12 "PHF12 protein" species:9... 144 1.3e-05 2
UNIPROTKB|D4AC30 - symbol:D4AC30 "Uncharacterized protein... 143 1.4e-05 2
UNIPROTKB|E2QYC0 - symbol:PHF12 "Uncharacterized protein"... 144 1.6e-05 2
UNIPROTKB|F1NP02 - symbol:PHF21A "Uncharacterized protein... 137 1.7e-05 1
UNIPROTKB|E1C765 - symbol:WHSC1 "Uncharacterized protein"... 137 1.8e-05 3
UNIPROTKB|F1MFF9 - symbol:Bt.62145 "Uncharacterized prote... 152 1.9e-05 2
UNIPROTKB|F1P5P6 - symbol:PHF21A "Uncharacterized protein... 137 1.9e-05 1
UNIPROTKB|I3LDB0 - symbol:I3LDB0 "Uncharacterized protein... 136 2.0e-05 1
ZFIN|ZDB-GENE-030131-6456 - symbol:phf21ab "PHD finger pr... 133 2.0e-05 2
MGI|MGI:1924057 - symbol:Phf12 "PHD finger protein 12" sp... 144 2.0e-05 2
UNIPROTKB|E1B7A1 - symbol:PHF12 "Uncharacterized protein"... 144 2.0e-05 2
WARNING: Descriptions of 73 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2040550 [details] [associations]
symbol:AT2G36720 "AT2G36720" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009630 "gravitropism" evidence=RCA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016746 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 HSSP:Q14839 eggNOG:NOG145066 EMBL:AY093116
EMBL:BT008812 IPI:IPI00537974 RefSeq:NP_850270.1 UniGene:At.37517
ProteinModelPortal:Q8RWG0 SMR:Q8RWG0 PaxDb:Q8RWG0 PRIDE:Q8RWG0
EnsemblPlants:AT2G36720.1 GeneID:818244 KEGG:ath:AT2G36720
TAIR:At2g36720 HOGENOM:HOG000149118 InParanoid:Q8RWG0 OMA:DSCPRAF
PhylomeDB:Q8RWG0 ProtClustDB:CLSN2680077 Genevestigator:Q8RWG0
Uniprot:Q8RWG0
Length = 1007
Score = 831 (297.6 bits), Expect = 3.1e-108, Sum P(2) = 3.1e-108
Identities = 144/237 (60%), Positives = 177/237 (74%)
Query: 617 ITRKDLRMHKLVFEEGGLEDGAEVGYFVRGEKFLVGYKKGFGILCTCCNSEVSPSQFEAH 676
+ RKD +HKLVF+ GGL +G E+GY+ RG+K L GYK G GI C CC EVSPS FEAH
Sbjct: 516 LARKDQGLHKLVFDRGGLPEGTELGYYARGQKLLGGYKMGAGIYCYCCKCEVSPSLFEAH 575
Query: 677 AGWASRRKPFQHIYTSNGVSLHELSIKLSLERPFSSKENDDLCGICMDGGDLLCCDSCPR 736
AGWASRRKP+ +IYTSNGVSLHE + S R +S+ +N+DLC IC DGG+LL CDSCPR
Sbjct: 576 AGWASRRKPYFYIYTSNGVSLHEWATTFSHGRKYSANDNNDLCVICADGGNLLLCDSCPR 635
Query: 737 AFHIDCVSLPGIPSGTWHCRYCMNTFQKEKFVEYNANARAAGRIEGVDPFAQMVSRCIRI 796
AFHI+CVSLP IP G WHC+YC N F E EYN N+ A G++EGVDP Q+ RCIR+
Sbjct: 636 AFHIECVSLPSIPRGNWHCKYCENKFTSEIAGEYNVNSSAVGQLEGVDPVDQLAGRCIRV 695
Query: 797 VQTPDTELGGCVLCRGRDFCKSRFGRRTVILCDQCEREYHVGCLKDHGMEDL-QVPQ 852
V+ + E GCVLC G DFC+S FG RT+I+CDQCE+EYH+GCL + DL ++P+
Sbjct: 696 VKNMEAETNGCVLCSGSDFCRSGFGPRTIIICDQCEKEYHIGCLSSQNIVDLKELPK 752
Score = 259 (96.2 bits), Expect = 3.1e-108, Sum P(2) = 3.1e-108
Identities = 56/181 (30%), Positives = 100/181 (55%)
Query: 407 LKNFLESGILEGMSVMYIRGSKVKGPGVSGLRGVVKGSGISCFCDDCKGNQVVTPAVFEL 466
+++ E+G+L+G+SV+Y+ G+ VK LRG+++ GI C C C V++ + FE+
Sbjct: 264 VRDLFETGLLDGLSVVYM-GT-VKSQAFP-LRGIIRDGGILCSCSSCDWANVISTSKFEI 320
Query: 467 HAGSSNKRPPEYIYLENGKTLRDIMNVCKDSPLETLEKAVRMVLGSSSMKKANFCLNCRV 526
HA +R +YI ENGK+L D++N+ +++PL LE + + +S +K C C+
Sbjct: 321 HACKQYRRASQYICFENGKSLLDVLNISRNTPLHALEATILDAVDYASKEKRFTCKRCKG 380
Query: 527 SFSNAGVEELMLLCKSCVELKESQAGSAEIKEPLSHSSEM-EPQPPSVELEESPAPSGEL 585
F + + LCKSC E++ SQA A + S + + P +++ P+ S +
Sbjct: 381 PFPFSSLGHRGFLCKSCSEVETSQASLAATRTSTSAPACITSPVKSRLKITRKPSESTSI 440
Query: 586 T 586
+
Sbjct: 441 S 441
Score = 120 (47.3 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 31/82 (37%), Positives = 45/82 (54%)
Query: 410 FLESGILEGMSV-MYIRGSKVKGPGVSGLRGVVKGSGISCFCDDCKGNQVVTPAVFELHA 468
F G+ EG + Y RG K+ G G G+GI C+C C+ V+P++FE HA
Sbjct: 528 FDRGGLPEGTELGYYARGQKLLG-------GYKMGAGIYCYCCKCE----VSPSLFEAHA 576
Query: 469 GSSNKRPPE-YIYLENGKTLRD 489
G +++R P YIY NG +L +
Sbjct: 577 GWASRRKPYFYIYTSNGVSLHE 598
Score = 73 (30.8 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 14/45 (31%), Positives = 20/45 (44%)
Query: 717 DLCGICMDGGDLLCCDSCPRAFHIDCVS------LPGIPSGTWHC 755
D C ++ CD C + +HI C+S L +P G W C
Sbjct: 713 DFCRSGFGPRTIIICDQCEKEYHIGCLSSQNIVDLKELPKGNWFC 757
>TAIR|locus:2147391 [details] [associations]
symbol:AT5G36740 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
SMART:SM00384 EMBL:CP002688 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 InterPro:IPR020478 PRINTS:PR00929 Gene3D:3.40.630.30
InterPro:IPR016181 SUPFAM:SSF55729 GO:GO:0016746 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 UniGene:At.55161 IPI:IPI00544011
RefSeq:NP_568540.1 UniGene:At.55166 ProteinModelPortal:F4K4H9
SMR:F4K4H9 EnsemblPlants:AT5G36740.1 GeneID:833643
KEGG:ath:AT5G36740 OMA:IDTWTSG Uniprot:F4K4H9
Length = 1179
Score = 247 (92.0 bits), Expect = 3.1e-20, Sum P(3) = 3.1e-20
Identities = 52/129 (40%), Positives = 69/129 (53%)
Query: 658 GILCTCCNSEVSPSQFEAHAGWASRRKPFQHIYTSNGVSL----HELSIKLSLER----- 708
GI C CC+ S FE HAG +R +PF+ +Y G SL HE K S +
Sbjct: 581 GIRCNCCDEVFSVLDFEVHAG-GNRNQPFKSLYLEGGNSLLQCLHESMNKQSESQLKGYH 639
Query: 709 --PFSSKE-NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYCMNTF-QK 764
F S + NDD CGIC DGGDL+CCD CP FH C+ + PSG W+C C F +K
Sbjct: 640 FVDFGSGDPNDDTCGICGDGGDLICCDGCPSTFHQSCLDIKKFPSGAWYCYNCSCKFCEK 699
Query: 765 EKFVEYNAN 773
++ ++ +
Sbjct: 700 DEAAKHETS 708
Score = 92 (37.4 bits), Expect = 0.00050, Sum P(3) = 0.00050
Identities = 24/77 (31%), Positives = 38/77 (49%)
Query: 437 LRGVVKGSGISCFCDDCKGNQVVTPAVFELHAGSSNKRPPEYIYLENGKTLRDIMNVCKD 496
L G++ GI C C D +V + FE+HAG + +P + +YLE G +L ++ +
Sbjct: 573 LEGIITKEGIRCNCCD----EVFSVLDFEVHAGGNRNQPFKSLYLEGGNSLLQCLHESMN 628
Query: 497 SPLETLEKAVRMV-LGS 512
E+ K V GS
Sbjct: 629 KQSESQLKGYHFVDFGS 645
Score = 87 (35.7 bits), Expect = 3.1e-20, Sum P(3) = 3.1e-20
Identities = 46/173 (26%), Positives = 79/173 (45%)
Query: 281 GRVQMEMD-EEKKNDIERE-LVENGVLESSMVGKHSSTLCNGESNVAKSVAVDGN--DEG 336
G V+ ++ ++KK IERE L+ VL S V + L N + + K+V GN G
Sbjct: 38 GNVENVIEIKDKKKVIEREILITRRVLRSGSVARD---LVNSDKH-CKAVKRKGNVVSGG 93
Query: 337 KTVNVVVERPLRRFTRSLLQQKVELAKGSLSKDGGKRSDVTEVANDGVGGPVKQETVMKP 396
+V+ V E + +SL+ +++ +G RS+V + D K+E V +
Sbjct: 94 SSVDEVKEEVKQECVKSLVPEEI---RGD-----DFRSEVKVESKDDRSDDGKEEKVQRK 145
Query: 397 RKVMRKFYSKLKNFLESGILEGMSVMYIRGSKVKGPGVSGLRGVVKGSGISCF 449
R RKF ++ ++G++ + G K + G + +V GS CF
Sbjct: 146 RGRPRKFGMSSQSD-DNGLISNCKLRTSLGKKKELVGDDNVEKLVGGS---CF 194
Score = 45 (20.9 bits), Expect = 0.00050, Sum P(3) = 0.00050
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 825 VILCDQCEREYHVGCL 840
+I CD C +H CL
Sbjct: 662 LICCDGCPSTFHQSCL 677
Score = 43 (20.2 bits), Expect = 3.1e-20, Sum P(3) = 3.1e-20
Identities = 13/55 (23%), Positives = 24/55 (43%)
Query: 544 VELKESQAGSAEIKEPLSHSSEMEPQPPSVELEESPAPSGELTDTS-NRSPEPNS 597
VE+K+ + G E+ + +P V++ S T+ R+PE +S
Sbjct: 225 VEIKDDECGIVELHDEELQVKRKRGRPRKVQISSQSDESRPNTNCKLARTPELSS 279
Score = 41 (19.5 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 18/59 (30%), Positives = 26/59 (44%)
Query: 62 VKKLKTYESRKKRKRQEQSVVVKETEDKREEEVKSDVFDVINERERPIREKESKDDSEN 120
VK L E R R E V E++D R ++ K + V +R RP + S +N
Sbjct: 108 VKSLVPEEIRGDDFRSEVKV---ESKDDRSDDGKEE--KVQRKRGRPRKFGMSSQSDDN 161
Score = 37 (18.1 bits), Expect = 4.1e-15, Sum P(3) = 4.1e-15
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 150 GKVVIGVEEEKKNECDEVLMNVE 172
G V V+EE K EC + L+ E
Sbjct: 93 GSSVDEVKEEVKQECVKSLVPEE 115
>TAIR|locus:2832118 [details] [associations]
symbol:AT5G36670 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
SMART:SM00384 EMBL:CP002688 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 InterPro:IPR020478 PRINTS:PR00929 Gene3D:3.40.630.30
InterPro:IPR016181 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 IPI:IPI00527539 RefSeq:NP_568537.1 UniGene:At.55161
ProteinModelPortal:F4K4G6 SMR:F4K4G6 EnsemblPlants:AT5G36670.1
GeneID:833632 KEGG:ath:AT5G36670 ArrayExpress:F4K4G6 Uniprot:F4K4G6
Length = 1193
Score = 247 (92.0 bits), Expect = 3.3e-20, Sum P(3) = 3.3e-20
Identities = 52/129 (40%), Positives = 69/129 (53%)
Query: 658 GILCTCCNSEVSPSQFEAHAGWASRRKPFQHIYTSNGVSL----HELSIKLSLER----- 708
GI C CC+ S FE HAG +R +PF+ +Y G SL HE K S +
Sbjct: 581 GIRCNCCDEVFSVLDFEVHAG-GNRNQPFKSLYLEGGNSLLQCLHESMNKQSESQLKGYH 639
Query: 709 --PFSSKE-NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYCMNTF-QK 764
F S + NDD CGIC DGGDL+CCD CP FH C+ + PSG W+C C F +K
Sbjct: 640 FVDFGSGDPNDDTCGICGDGGDLICCDGCPSTFHQSCLDIKKFPSGAWYCYNCSCKFCEK 699
Query: 765 EKFVEYNAN 773
++ ++ +
Sbjct: 700 DEAAKHETS 708
Score = 92 (37.4 bits), Expect = 0.00052, Sum P(3) = 0.00052
Identities = 24/77 (31%), Positives = 38/77 (49%)
Query: 437 LRGVVKGSGISCFCDDCKGNQVVTPAVFELHAGSSNKRPPEYIYLENGKTLRDIMNVCKD 496
L G++ GI C C D +V + FE+HAG + +P + +YLE G +L ++ +
Sbjct: 573 LEGIITKEGIRCNCCD----EVFSVLDFEVHAGGNRNQPFKSLYLEGGNSLLQCLHESMN 628
Query: 497 SPLETLEKAVRMV-LGS 512
E+ K V GS
Sbjct: 629 KQSESQLKGYHFVDFGS 645
Score = 87 (35.7 bits), Expect = 3.3e-20, Sum P(3) = 3.3e-20
Identities = 46/173 (26%), Positives = 79/173 (45%)
Query: 281 GRVQMEMD-EEKKNDIERE-LVENGVLESSMVGKHSSTLCNGESNVAKSVAVDGN--DEG 336
G V+ ++ ++KK IERE L+ VL S V + L N + + K+V GN G
Sbjct: 38 GNVENVIEIKDKKKVIEREILITRRVLRSGSVARD---LVNSDKH-CKAVKRKGNVVSGG 93
Query: 337 KTVNVVVERPLRRFTRSLLQQKVELAKGSLSKDGGKRSDVTEVANDGVGGPVKQETVMKP 396
+V+ V E + +SL+ +++ +G RS+V + D K+E V +
Sbjct: 94 SSVDEVKEEVKQECVKSLVPEEI---RGD-----DFRSEVKVESKDDRSDDGKEEKVQRK 145
Query: 397 RKVMRKFYSKLKNFLESGILEGMSVMYIRGSKVKGPGVSGLRGVVKGSGISCF 449
R RKF ++ ++G++ + G K + G + +V GS CF
Sbjct: 146 RGRPRKFGMSSQSD-DNGLISNCKLRTSLGKKKELVGDDNVEKLVGGS---CF 194
Score = 45 (20.9 bits), Expect = 0.00052, Sum P(3) = 0.00052
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 825 VILCDQCEREYHVGCL 840
+I CD C +H CL
Sbjct: 662 LICCDGCPSTFHQSCL 677
Score = 43 (20.2 bits), Expect = 3.3e-20, Sum P(3) = 3.3e-20
Identities = 13/55 (23%), Positives = 24/55 (43%)
Query: 544 VELKESQAGSAEIKEPLSHSSEMEPQPPSVELEESPAPSGELTDTS-NRSPEPNS 597
VE+K+ + G E+ + +P V++ S T+ R+PE +S
Sbjct: 225 VEIKDDECGIVELHDEELQVKRKRGRPRKVQISSQSDESRPNTNCKLARTPELSS 279
Score = 41 (19.5 bits), Expect = 1.7e-15, Sum P(3) = 1.7e-15
Identities = 18/59 (30%), Positives = 26/59 (44%)
Query: 62 VKKLKTYESRKKRKRQEQSVVVKETEDKREEEVKSDVFDVINERERPIREKESKDDSEN 120
VK L E R R E V E++D R ++ K + V +R RP + S +N
Sbjct: 108 VKSLVPEEIRGDDFRSEVKV---ESKDDRSDDGKEE--KVQRKRGRPRKFGMSSQSDDN 161
Score = 37 (18.1 bits), Expect = 4.3e-15, Sum P(3) = 4.3e-15
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 150 GKVVIGVEEEKKNECDEVLMNVE 172
G V V+EE K EC + L+ E
Sbjct: 93 GSSVDEVKEEVKQECVKSLVPEE 115
>TAIR|locus:2201021 [details] [associations]
symbol:AT1G05380 "AT1G05380" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IC;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00249 EMBL:CP002684
GO:GO:0046872 GO:GO:0008270 Gene3D:3.40.630.30 InterPro:IPR016181
SUPFAM:SSF55729 GO:GO:0016746 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 EMBL:AC005106 HSSP:Q14839
IPI:IPI00532257 RefSeq:NP_001117233.1 RefSeq:NP_563736.3
UniGene:At.15326 ProteinModelPortal:Q9ZW00 SMR:Q9ZW00 PRIDE:Q9ZW00
EnsemblPlants:AT1G05380.1 EnsemblPlants:AT1G05380.2 GeneID:837039
KEGG:ath:AT1G05380 TAIR:At1g05380 InParanoid:Q9ZW00 OMA:RIRSSIK
PhylomeDB:Q9ZW00 ProtClustDB:CLSN2699134 Genevestigator:Q9ZW00
Uniprot:Q9ZW00
Length = 1138
Score = 258 (95.9 bits), Expect = 5.3e-18, Sum P(3) = 5.3e-18
Identities = 57/149 (38%), Positives = 84/149 (56%)
Query: 628 VFEEGGLEDGAEVGYFVR-GEKFLV-GYKKGFGILCTCCNSEVSPSQFEAHAGWASRRKP 685
+ E G ++ +V Y R G K ++ G+ GI C CC+ ++ S+FE HAG S + P
Sbjct: 524 LIESGVVQLRQKVQYMRRRGAKVMLEGWITREGIHCDCCSKILTVSRFEIHAGSKSCQ-P 582
Query: 686 FQHIYTSNGVSLHELSIK----------LSLERPFSSKE--NDDLCGICMDGGDLLCCDS 733
FQ+IY +G SL + ++ L+L + + + NDD CGIC DGGDL+CCD
Sbjct: 583 FQNIYLESGASLLQCQVRAWNMQKDATNLALHQVDTDGDDPNDDACGICGDGGDLICCDG 642
Query: 734 CPRAFHIDCVSLPGIPSGTWHCRYCMNTF 762
CP +H +C+ + +PSG WHC C F
Sbjct: 643 CPSTYHQNCLGMQVLPSGDWHCPNCTCKF 671
Score = 57 (25.1 bits), Expect = 5.3e-18, Sum P(3) = 5.3e-18
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 824 TVILCDQCEREYHVGCLKD 842
+++ C CER YH CL D
Sbjct: 687 SLLSCGMCERRYHQLCLND 705
Score = 39 (18.8 bits), Expect = 5.3e-18, Sum P(3) = 5.3e-18
Identities = 14/39 (35%), Positives = 17/39 (43%)
Query: 70 SRK-KRKRQEQSVVVKETEDKREEEVKSDVFDVINERER 107
SRK KRK+ E S KE K + V + E R
Sbjct: 265 SRKSKRKKSEYSKPKKEFNTKSKSTFPELVNPDVREERR 303
>TAIR|locus:2086395 [details] [associations]
symbol:ROS4 "AT3G14980" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0007267 "cell-cell signaling"
evidence=RCA] [GO:0009616 "virus induced gene silencing"
evidence=RCA] [GO:0010267 "production of ta-siRNAs involved in RNA
interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0004402
"histone acetyltransferase activity" evidence=IDA] [GO:0010385
"double-stranded methylated DNA binding" evidence=IPI] [GO:0042393
"histone binding" evidence=IDA] [GO:0043971 "histone H3-K18
acetylation" evidence=IDA] [GO:0043972 "histone H3-K23 acetylation"
evidence=IDA] [GO:0044030 "regulation of DNA methylation"
evidence=IMP] [GO:0044154 "histone H3-K14 acetylation"
evidence=IDA] [GO:0080188 "RNA-directed DNA methylation"
evidence=IMP] InterPro:IPR001841 InterPro:IPR000182
InterPro:IPR001739 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS51186 SMART:SM00184
SMART:SM00249 GO:GO:0009506 GO:GO:0005634 EMBL:CP002686
GO:GO:0046872 GO:GO:0008270 Gene3D:3.40.630.30 InterPro:IPR016181
SUPFAM:SSF55729 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0042393 Gene3D:3.30.890.10
GO:GO:0044030 GO:GO:0044154 GO:GO:0004402 GO:GO:0010385
GO:GO:0043971 UniGene:At.53322 UniGene:At.73310 IPI:IPI00540986
RefSeq:NP_188116.1 ProteinModelPortal:F4IXE7 SMR:F4IXE7
PRIDE:F4IXE7 EnsemblPlants:AT3G14980.1 GeneID:820727
KEGG:ath:AT3G14980 OMA:AECNSKL GO:GO:0043972 GO:GO:0080188
Uniprot:F4IXE7
Length = 1189
Score = 229 (85.7 bits), Expect = 4.4e-14, Sum P(3) = 4.4e-14
Identities = 43/113 (38%), Positives = 65/113 (57%)
Query: 658 GILCTCCNSEVSPSQFEAHAGWASRRKPFQHIYTSNG-----VSLHELSIKLS------- 705
G++CTCCN VS S+F+ HAG+ ++ P +++ +G L S +
Sbjct: 657 GVVCTCCNKTVSLSEFKNHAGF-NQNCPCLNLFMGSGKPFASCQLEAWSAEYKARRNGWR 715
Query: 706 LERPFSSKENDDLCGICMDGGDLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYC 758
LE+ NDD CG+C DGG+L+CCD+CP FH C+S+ +P G+W+C C
Sbjct: 716 LEKASDDDPNDDSCGVCGDGGELICCDNCPSTFHQACLSMQVLPEGSWYCSSC 768
Score = 47 (21.6 bits), Expect = 4.4e-14, Sum P(3) = 4.4e-14
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 828 CDQCEREYHVGCLK 841
C QC +YH CL+
Sbjct: 789 CSQCAHKYHGTCLQ 802
Score = 42 (19.8 bits), Expect = 4.4e-14, Sum P(3) = 4.4e-14
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 424 IRGSKVKGPGVSGLRGVVKGSGISCFCDDCKGNQ 457
++ S VKG V L G+V G S D C G +
Sbjct: 145 LKHSIVKGREVY-LGGIVSGKCKSLNLDKCDGKE 177
Score = 41 (19.5 bits), Expect = 5.6e-14, Sum P(3) = 5.6e-14
Identities = 15/54 (27%), Positives = 28/54 (51%)
Query: 293 NDIERELVENGVLESSMVGKHSSTLCNGESNV-AKSVAVDGNDEGKTVNVVVER 345
+DI RE + ++ESS G +S+ S V + V + G GK ++ +++
Sbjct: 119 SDIARETIPLHLVESSNKGVSTSSYLLKHSIVKGREVYLGGIVSGKCKSLNLDK 172
Score = 39 (18.8 bits), Expect = 9.0e-14, Sum P(3) = 9.0e-14
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 70 SRKKRKRQE-QSVVVKETEDKREEEVKSDV 98
S+K R E QS++ KE E+E +
Sbjct: 429 SQKVSSRLERQSIIGKEISGTHEQEASKGI 458
>UNIPROTKB|C9JFR1 [details] [associations]
symbol:AIRE "Autoimmune regulator" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AP001060 IPI:IPI00031188
HGNC:HGNC:360 ProteinModelPortal:C9JFR1 SMR:C9JFR1 STRING:C9JFR1
Ensembl:ENST00000329347 HOGENOM:HOG000207903 ArrayExpress:C9JFR1
Bgee:C9JFR1 Uniprot:C9JFR1
Length = 244
Score = 185 (70.2 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 30/56 (53%), Positives = 39/56 (69%)
Query: 712 SKENDDLCGICMDGGDLLCCDSCPRAFHIDCVSLP--GIPSGTWHCRYCMNTFQKE 765
S +N+D C +C DGG+L+CCD CPRAFH+ C+S P IPSGTW C C+ +E
Sbjct: 85 SPKNEDECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQATVQE 140
>TAIR|locus:2168088 [details] [associations]
symbol:AT5G59830 "AT5G59830" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0048573 "photoperiodism, flowering" evidence=RCA]
EMBL:CP002688 IPI:IPI00541231 RefSeq:NP_200791.2 RefSeq:NP_974964.1
UniGene:At.29202 UniGene:At.29203 EnsemblPlants:AT5G59830.1
EnsemblPlants:AT5G59830.2 GeneID:836104 KEGG:ath:AT5G59830
OMA:FQAATRE Uniprot:F4JXC7
Length = 425
Score = 212 (79.7 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 52/157 (33%), Positives = 80/157 (50%)
Query: 364 GSLSKDGGKRSDVTEVANDGVGG-P-VKQETVMKPRKVMRKFYSKLKNFLESGILEGMSV 421
GS G S+ +VA +G P K E ++ F S +++ + +G+L+G+ V
Sbjct: 250 GSSQTSSGVVSE-QQVAKPSLGSLPKTKAEAKSSKKEASTSFPSNVRSLISTGMLDGVPV 308
Query: 422 MYIRGSKVKGPGVSGLRGVVKGSGISCFCDDCKGNQVVTPAVFELHAGSSNKRPPEYIYL 481
Y+ S+ + LRGV+KGSG C C C +V+ FE HAG K P +IY
Sbjct: 309 KYVSVSREE------LRGVIKGSGYLCGCQTCDFTKVLNAYAFERHAGCKTKHPNNHIYF 362
Query: 482 ENGKTLRDIMNVCKDSPLETLEKAVRMVLGSSSMKKA 518
ENGKT+ I+ +++P L ++ V GS +KA
Sbjct: 363 ENGKTIYQIVQELRNTPESILFDVIQTVFGSPINQKA 399
Score = 37 (18.1 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 359 VELAKGSLSKDGGKRSDVTEV 379
VE+A G DG ++ V+ V
Sbjct: 137 VEVAGGCFGGDGNRKLPVSRV 157
>TAIR|locus:2173179 [details] [associations]
symbol:AT5G13660 "AT5G13660" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002688 EMBL:AB006704 eggNOG:NOG12793
UniGene:At.32033 UniGene:At.66715 IPI:IPI00892118
RefSeq:NP_001119218.1 EnsemblPlants:AT5G13660.2 GeneID:831211
KEGG:ath:AT5G13660 TAIR:At5g13660 HOGENOM:HOG000064604 OMA:EQHANCK
PhylomeDB:B3H544 ProtClustDB:CLSN2702252 Genevestigator:B3H544
Uniprot:B3H544
Length = 537
Score = 206 (77.6 bits), Expect = 4.3e-13, P = 4.3e-13
Identities = 47/134 (35%), Positives = 73/134 (54%)
Query: 387 PVKQETVMKPRKVMRKFYSKLKNFLESGILEGMSVMYIRGSKVKGPGVSGLRGVVKGSGI 446
P ++T + F S +K+ L +GI +G++V Y S+ + L+G++KG+G
Sbjct: 382 PKIKDTKTAKKGSTNTFPSNVKSLLSTGIFDGVTVKYYSWSREQ----RNLKGMIKGTGY 437
Query: 447 SCFCDDCKGNQVVTPAVFELHAGSSNKRPPEYIYLENGKTLRDIMNVCKDSPLETLEKAV 506
C C +CK N+V+ FE HA K P +IY ENGKT+ ++ K++P E L A+
Sbjct: 438 LCGCGNCKLNKVLNAYEFEQHANCKTKHPNNHIYFENGKTIYGVVQELKNTPQEKLFDAI 497
Query: 507 RMVLGSSSMKKANF 520
+ V GS K NF
Sbjct: 498 QNVTGSDINHK-NF 510
>ZFIN|ZDB-GENE-071008-4 [details] [associations]
symbol:aire "autoimmune regulator" species:7955
"Danio rerio" [GO:0045182 "translation regulator activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006959
"humoral immune response" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000770
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR008087
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414
SMART:SM00184 SMART:SM00249 ZFIN:ZDB-GENE-071008-4 GO:GO:0005634
GO:GO:0005737 GO:GO:0006417 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0045182 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0006959 Gene3D:3.10.390.10 InterPro:IPR010919
SUPFAM:SSF63763 GeneTree:ENSGT00440000034278 EMBL:BX649390
IPI:IPI00876716 Ensembl:ENSDART00000079317 Bgee:F1Q623
Uniprot:F1Q623
Length = 513
Score = 203 (76.5 bits), Expect = 8.4e-13, P = 8.4e-13
Identities = 49/146 (33%), Positives = 70/146 (47%)
Query: 710 FSSKENDDLCGICMDGGDLLCCDSCPRAFHIDCVSLP--GIPSGTWHCRYCMNTFQKEK- 766
F+ + NDD C +C DGG+L+CCD CPRAFH+ C+ P IP GTW C+ C + K++
Sbjct: 288 FAVEHNDDECAVCKDGGELICCDGCPRAFHLSCLVPPLTSIPRGTWRCQLCQSNRLKDRT 347
Query: 767 --FVEYNANARAAGRIEGVDPFAQMVSRCIRIV-----------QTPDTELGGCVLCRGR 813
V+ A ++G F+ + S + V Q+ D E G + G
Sbjct: 348 YTHVQPPATETSSGSAVDFSFFSSLSSTSLSTVSASSSAQSMGLQSSDGERVGIRMACG- 406
Query: 814 DFCKSRFGRRTVILCDQCEREYHVGC 839
C G +I C QC + YH C
Sbjct: 407 -ICYLTRGE--LITCPQCLQAYHALC 429
>UNIPROTKB|E1BIC4 [details] [associations]
symbol:AIRE "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006959 "humoral
immune response" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0045182 "translation regulator activity"
evidence=IEA] InterPro:IPR000770 InterPro:IPR001965
InterPro:IPR004865 InterPro:IPR008087 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01342 Pfam:PF03172 PRINTS:PR01711
PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414 SMART:SM00249
SMART:SM00258 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
GO:GO:0006417 GO:GO:0046872 GO:GO:0015629 GO:GO:0008270
GO:GO:0045944 GO:GO:0003682 GO:GO:0045182 GO:GO:0044212
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 OMA:NDDECAV
GO:GO:0006959 Gene3D:3.10.390.10 InterPro:IPR010919 SUPFAM:SSF63763
GeneTree:ENSGT00440000034278 EMBL:DAAA02003438 EMBL:DAAA02003439
IPI:IPI00693894 Ensembl:ENSBTAT00000031852 Uniprot:E1BIC4
Length = 561
Score = 177 (67.4 bits), Expect = 8.0e-12, Sum P(2) = 8.0e-12
Identities = 31/61 (50%), Positives = 41/61 (67%)
Query: 709 PFSSKENDDLCGICMDGGDLLCCDSCPRAFHIDCVSLP--GIPSGTWHCRYCMN--TFQK 764
P ++N+D C C DGG+LLCCD CPRAFH+ C++ P IPSGTW C C+ T Q+
Sbjct: 297 PQLHQKNEDECAACRDGGELLCCDGCPRAFHLACLTPPLSEIPSGTWRCSNCVQGTTAQR 356
Query: 765 E 765
+
Sbjct: 357 D 357
Score = 66 (28.3 bits), Expect = 8.0e-12, Sum P(2) = 8.0e-12
Identities = 42/146 (28%), Positives = 56/146 (38%)
Query: 336 GKTVNVVVERPLRRFTRSLLQQKVELAKGSLSKDGGKRSDVTEVANDGVGGPVKQETVMK 395
G V++ RP + R L++ + +LS G + AN G +T K
Sbjct: 124 GPKATVLLPRPPTK--RKALEEPRTVPPAALSPRG-----TSSPANTG------SQTKTK 170
Query: 396 PRKVMRKFYSKLKNFLESGILEGMSVMYIRGSKVKGPGVSGLRGVVKG--------SGIS 447
P K + L +GI + MS R V V G RG V+G SG S
Sbjct: 171 PAKKPESNAEPQRLPLGNGI-QTMSTSVQRAMAVSSGDVPGARGAVEGILIQQVFESGGS 229
Query: 448 CFCDDCKGNQVVTPAVFELHAGSSNK 473
C G + TP FE AG NK
Sbjct: 230 KKCIQV-GGEFYTPNKFEDPAGGKNK 254
>UNIPROTKB|C9JL37 [details] [associations]
symbol:AIRE "Autoimmune regulator" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AP001060 HGNC:HGNC:360
HOGENOM:HOG000060093 IPI:IPI00480202 ProteinModelPortal:C9JL37
SMR:C9JL37 STRING:C9JL37 Ensembl:ENST00000355347
ArrayExpress:C9JL37 Bgee:C9JL37 Uniprot:C9JL37
Length = 338
Score = 185 (70.2 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 30/56 (53%), Positives = 39/56 (69%)
Query: 712 SKENDDLCGICMDGGDLLCCDSCPRAFHIDCVSLP--GIPSGTWHCRYCMNTFQKE 765
S +N+D C +C DGG+L+CCD CPRAFH+ C+S P IPSGTW C C+ +E
Sbjct: 85 SPKNEDECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQATVQE 140
>UNIPROTKB|O43918 [details] [associations]
symbol:AIRE "Autoimmune regulator" species:9606 "Homo
sapiens" [GO:0045182 "translation regulator activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0042393 "histone binding" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IDA] [GO:0006955 "immune
response" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0015629 "actin cytoskeleton" evidence=IDA] InterPro:IPR000770
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR008087
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414
SMART:SM00249 SMART:SM00258 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0045893 GO:GO:0006955 GO:GO:0006417
GO:GO:0046872 GO:GO:0015629 GO:GO:0008270 GO:GO:0045944
EMBL:CH471079 GO:GO:0006351 GO:GO:0003682 GO:GO:0045182
GO:GO:0044212 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AB006682 EMBL:AB006683 EMBL:AB006684
EMBL:AB006685 EMBL:Z97990 EMBL:AJ009610 EMBL:AP001754 EMBL:AP001060
EMBL:BC137268 EMBL:BC137270 IPI:IPI00015149 IPI:IPI00031178
IPI:IPI00031188 RefSeq:NP_000374.1 UniGene:Hs.129829 PDB:1XWH
PDB:2KE1 PDB:2KFT PDB:2LRI PDBsum:1XWH PDBsum:2KE1 PDBsum:2KFT
PDBsum:2LRI ProteinModelPortal:O43918 SMR:O43918 DIP:DIP-47504N
IntAct:O43918 MINT:MINT-6542056 STRING:O43918 PhosphoSite:O43918
PRIDE:O43918 Ensembl:ENST00000291582 Ensembl:ENST00000337909
Ensembl:ENST00000397994 Ensembl:ENST00000468282 GeneID:326
KEGG:hsa:326 UCSC:uc002zei.2 CTD:326 GeneCards:GC21P045705
HGNC:HGNC:360 HPA:HPA038267 MIM:109100 MIM:240300 MIM:607358
neXtProt:NX_O43918 Orphanet:3453 PharmGKB:PA24654 eggNOG:NOG317492
HOGENOM:HOG000060093 HOVERGEN:HBG014961 InParanoid:O43918 KO:K10603
OMA:NDDECAV OrthoDB:EOG4VX25M PhylomeDB:O43918
EvolutionaryTrace:O43918 GenomeRNAi:326 NextBio:1337
ArrayExpress:O43918 Bgee:O43918 CleanEx:HS_AIRE
Genevestigator:O43918 GermOnline:ENSG00000160224 GO:GO:0042393
GO:GO:0006959 Gene3D:3.10.390.10 InterPro:IPR010919 SUPFAM:SSF63763
Uniprot:O43918
Length = 545
Score = 184 (69.8 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 30/59 (50%), Positives = 40/59 (67%)
Query: 709 PFSSKENDDLCGICMDGGDLLCCDSCPRAFHIDCVSLP--GIPSGTWHCRYCMNTFQKE 765
P ++N+D C +C DGG+L+CCD CPRAFH+ C+S P IPSGTW C C+ +E
Sbjct: 289 PQLHQKNEDECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQATVQE 347
Score = 52 (23.4 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 29/99 (29%), Positives = 37/99 (37%)
Query: 383 GVGGPVKQETVMKPRKVMRKFYSKLKNFLESGILEGMSVMYIRGSKVKGPGVSGLRGVVK 442
G P Q KP K + + L +GI + MS R + V G RG V+
Sbjct: 150 GTASPGSQLKA-KPPKKPESSAEQQRLPLGNGI-QTMSASVQRAVAMSSGDVPGARGAVE 207
Query: 443 G--------SGISCFCDDCKGNQVVTPAVFELHAGSSNK 473
G SG S C G + TP+ FE NK
Sbjct: 208 GILIQQVFESGGSKKCIQV-GGEFYTPSKFEDSGSGKNK 245
>UNIPROTKB|I3LD78 [details] [associations]
symbol:I3LD78 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00530000062982 Ensembl:ENSSSCT00000022292 OMA:HCLELED
Uniprot:I3LD78
Length = 948
Score = 172 (65.6 bits), Expect = 8.3e-11, Sum P(3) = 8.3e-11
Identities = 32/89 (35%), Positives = 52/89 (58%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDC--VSLPGIPSGTWHCRYCMNTFQKEKFVEYNA 772
N+D C +C +GGDLLCC+ CP+ FH+ C +L PSG W C +C + + E VEY+
Sbjct: 707 NEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIGKPE--VEYDC 764
Query: 773 N----ARAAGRIEGVDPFAQMVSRCIRIV 797
+ ++ ++G+ P Q +C R++
Sbjct: 765 DNLQHSKKGKTVQGLSPVDQR--KCERLL 791
Score = 60 (26.2 bits), Expect = 8.3e-11, Sum P(3) = 8.3e-11
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 543 CVELKESQAGSAEIKEPLSH---SSEMEPQPPSVELEESPAPS 582
C+EL++ AGS+ + LS S + PQP S + SP PS
Sbjct: 506 CLELED--AGSSSLDNLLSRYISGSHLPPQPTST-MNPSPGPS 545
Score = 60 (26.2 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 27/115 (23%), Positives = 47/115 (40%)
Query: 2 ANGTDSEEKFVVLSKIRVGLKREFEFALKVQSEICGSLGRTRARKVQSNVDSGCVLGPPE 61
++G +E+ + +V +K+E + EIC G + K + S C+L PE
Sbjct: 577 SSGRTAEKTSLSFKSDQVKVKQE----PGTEDEICSFSGAVKQEKTEDGRRSACMLSSPE 632
Query: 62 ---VKKLKT---YESRKKRKRQEQSVVVKETEDKREEEVKSDVFDVINERERPIR 110
L T ES ++ V E D E +S + ++N + P+R
Sbjct: 633 SSLTPPLSTNLHLESELDALASLENHVKTEPTDMNESCKQSGLSSLVNGKS-PVR 686
Score = 54 (24.1 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 21/66 (31%), Positives = 29/66 (43%)
Query: 512 SSSMKKANFCLNCRVSFSNAG--VEELMLLCKSCVE----LKESQAGSAEIKEPLSHSSE 565
SS K C +C + S G VE LCK+C+E +K ++ KE +S S
Sbjct: 33 SSDEKSEQVCTSCEDNASAVGFCVECGEWLCKTCIEAHQRVKFTKDHLIRKKEDVSESVG 92
Query: 566 MEPQPP 571
Q P
Sbjct: 93 ASGQRP 98
Score = 53 (23.7 bits), Expect = 8.3e-11, Sum P(3) = 8.3e-11
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 66 KTYESRKKRKRQEQSVVVKETEDKREEEVKSDVFDVINE 104
K Y + Q + V ET + E+E+K +F +INE
Sbjct: 159 KNYVHFAATQVQNRIKEVNETNKRVEQEIKVAIFTLINE 197
Score = 39 (18.8 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 28/121 (23%), Positives = 46/121 (38%)
Query: 265 EEVKCEEVGLGKEY--EPGRVQMEMDEEKKNDIERELVENGVLESSMVGKHSSTLCNGES 322
E+ C G K+ E GR M ++ + L N LES + L + E+
Sbjct: 603 EDEICSFSGAVKQEKTEDGRRSACMLSSPESSLTPPLSTNLHLESEL-----DALASLEN 657
Query: 323 NVAKSVAVDGNDEGKTVNVVVERPLRRFTRSLLQQKVELAKGSLSKDGGKRSDVTEVAND 382
+V K+ D N+ K + + RSL+ + + +KD D V +
Sbjct: 658 HV-KTEPTDMNESCKQSGLSSLVNGKSPVRSLMHRSARIGGDGSNKDDDPNEDWCAVCQN 716
Query: 383 G 383
G
Sbjct: 717 G 717
Score = 38 (18.4 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 8/36 (22%), Positives = 17/36 (47%)
Query: 564 SEMEPQPPSVELEESPAPSGELTDTSNRSPEPNSAQ 599
++ Q + +++ PAP T T+ + P + Q
Sbjct: 347 AQKHQQLQQMRMQQPPAPVPTTTATTQQHPRQAAPQ 382
>UNIPROTKB|I3LQA6 [details] [associations]
symbol:AIRE "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006959 "humoral
immune response" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0045182 "translation regulator activity"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000770
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR008087
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414
SMART:SM00184 SMART:SM00249 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0006417 GO:GO:0046872 GO:GO:0015629
GO:GO:0008270 GO:GO:0045944 GO:GO:0003682 GO:GO:0045182
GO:GO:0044212 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 OMA:NDDECAV GO:GO:0006959 Gene3D:3.10.390.10
InterPro:IPR010919 SUPFAM:SSF63763 GeneTree:ENSGT00440000034278
EMBL:FP312783 Ensembl:ENSSSCT00000030488 Uniprot:I3LQA6
Length = 564
Score = 184 (69.8 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 29/53 (54%), Positives = 38/53 (71%)
Query: 709 PFSSKENDDLCGICMDGGDLLCCDSCPRAFHIDCVSLP--GIPSGTWHCRYCM 759
P ++N+D C +C DGG+L+CCD CPRAFH+ C+S P IPSGTW C C+
Sbjct: 297 PQPHQKNEDECAVCRDGGELICCDGCPRAFHLACLSPPLRDIPSGTWRCSSCL 349
>UNIPROTKB|I3LF49 [details] [associations]
symbol:I3LF49 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00530000062982 Ensembl:ENSSSCT00000030965
Uniprot:I3LF49
Length = 591
Score = 172 (65.6 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 32/89 (35%), Positives = 52/89 (58%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDC--VSLPGIPSGTWHCRYCMNTFQKEKFVEYNA 772
N+D C +C +GGDLLCC+ CP+ FH+ C +L PSG W C +C + + E VEY+
Sbjct: 367 NEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIGKPE--VEYDC 424
Query: 773 N----ARAAGRIEGVDPFAQMVSRCIRIV 797
+ ++ ++G+ P Q +C R++
Sbjct: 425 DNLQHSKKGKTVQGLSPVDQR--KCERLL 451
Score = 60 (26.2 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 543 CVELKESQAGSAEIKEPLSH---SSEMEPQPPSVELEESPAPS 582
C+EL++ AGS+ + LS S + PQP S + SP PS
Sbjct: 166 CLELED--AGSSSLDNLLSRYISGSHLPPQPTST-MNPSPGPS 205
Score = 60 (26.2 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 27/115 (23%), Positives = 47/115 (40%)
Query: 2 ANGTDSEEKFVVLSKIRVGLKREFEFALKVQSEICGSLGRTRARKVQSNVDSGCVLGPPE 61
++G +E+ + +V +K+E + EIC G + K + S C+L PE
Sbjct: 237 SSGRTAEKTSLSFKSDQVKVKQE----PGTEDEICSFSGAVKQEKTEDGRRSACMLSSPE 292
Query: 62 ---VKKLKT---YESRKKRKRQEQSVVVKETEDKREEEVKSDVFDVINERERPIR 110
L T ES ++ V E D E +S + ++N + P+R
Sbjct: 293 SSLTPPLSTNLHLESELDALASLENHVKTEPTDMNESCKQSGLSSLVNGKS-PVR 346
Score = 39 (18.8 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 28/121 (23%), Positives = 46/121 (38%)
Query: 265 EEVKCEEVGLGKEY--EPGRVQMEMDEEKKNDIERELVENGVLESSMVGKHSSTLCNGES 322
E+ C G K+ E GR M ++ + L N LES + L + E+
Sbjct: 263 EDEICSFSGAVKQEKTEDGRRSACMLSSPESSLTPPLSTNLHLESEL-----DALASLEN 317
Query: 323 NVAKSVAVDGNDEGKTVNVVVERPLRRFTRSLLQQKVELAKGSLSKDGGKRSDVTEVAND 382
+V K+ D N+ K + + RSL+ + + +KD D V +
Sbjct: 318 HV-KTEPTDMNESCKQSGLSSLVNGKSPVRSLMHRSARIGGDGSNKDDDPNEDWCAVCQN 376
Query: 383 G 383
G
Sbjct: 377 G 377
Score = 38 (18.4 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 8/36 (22%), Positives = 17/36 (47%)
Query: 564 SEMEPQPPSVELEESPAPSGELTDTSNRSPEPNSAQ 599
++ Q + +++ PAP T T+ + P + Q
Sbjct: 7 AQKHQQLQQMRMQQPPAPVPTTTATTQQHPRQAAPQ 42
>UNIPROTKB|F1PPM4 [details] [associations]
symbol:AIRE "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045182 "translation regulator activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000770
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR008087
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414
SMART:SM00249 SMART:SM00258 GO:GO:0005634 GO:GO:0005737
GO:GO:0006417 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0045182 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 OMA:NDDECAV GO:GO:0006959 Gene3D:3.10.390.10
InterPro:IPR010919 SUPFAM:SSF63763 GeneTree:ENSGT00440000034278
EMBL:AAEX03016632 Ensembl:ENSCAFT00000017065 Uniprot:F1PPM4
Length = 547
Score = 184 (69.8 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 29/53 (54%), Positives = 38/53 (71%)
Query: 709 PFSSKENDDLCGICMDGGDLLCCDSCPRAFHIDCVSLP--GIPSGTWHCRYCM 759
P ++N+D C +C DGG+L+CCD CPRAFH+ C+S P IPSGTW C C+
Sbjct: 289 PQLQQKNEDECAVCRDGGELICCDGCPRAFHLACLSPPLHDIPSGTWRCSSCL 341
Score = 44 (20.5 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 22/71 (30%), Positives = 30/71 (42%)
Query: 411 LESGILEGMSVMYIRGSKVKGPGVSGLRGVVKG--------SGISCFCDDCKGNQVVTPA 462
L +GI + MS R V V G G ++G SG S C G + TP+
Sbjct: 177 LGNGI-QTMSTSVQRAVTVSSGDVPGACGALEGILIQQVFESGGSKKCIQV-GGEFYTPS 234
Query: 463 VFELHAGSSNK 473
FE +G N+
Sbjct: 235 KFEDPSGGKNR 245
>RGD|1311139 [details] [associations]
symbol:Aire "autoimmune regulator" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005622 "intracellular"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0005886 "plasma membrane"
evidence=IEA;ISO] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0006959 "humoral immune response"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA;ISO] [GO:0015629 "actin
cytoskeleton" evidence=IEA;ISO] [GO:0042393 "histone binding"
evidence=IEA;ISO] [GO:0042802 "identical protein binding"
evidence=IEA;ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0045182 "translation regulator
activity" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000770 InterPro:IPR001965 InterPro:IPR004865
InterPro:IPR008087 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342
Pfam:PF03172 PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864
PROSITE:PS51414 SMART:SM00249 SMART:SM00258 RGD:1311139
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0006417
GO:GO:0046872 GO:GO:0015629 GO:GO:0008270 GO:GO:0045944
GO:GO:0003682 GO:GO:0045182 GO:GO:0044212 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 OMA:NDDECAV OrthoDB:EOG4VX25M
GO:GO:0006959 Gene3D:3.10.390.10 InterPro:IPR010919 SUPFAM:SSF63763
GeneTree:ENSGT00440000034278 IPI:IPI00360526
Ensembl:ENSRNOT00000001611 UCSC:RGD:1311139 Uniprot:D3ZV49
Length = 551
Score = 175 (66.7 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 28/53 (52%), Positives = 37/53 (69%)
Query: 709 PFSSKENDDLCGICMDGGDLLCCDSCPRAFHIDCVSLP--GIPSGTWHCRYCM 759
P ++N+D C +C DGG+L+CCD CPRAFH+ C+S P IPSG W C C+
Sbjct: 291 PQVHQKNEDECAVCHDGGELICCDGCPRAFHLACLSPPLQEIPSGLWRCSCCL 343
Score = 53 (23.7 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 26/98 (26%), Positives = 34/98 (34%)
Query: 553 SAEIKEPLSHSSEMEPQPPSVELEESPAPSGELTDTSNRSPEPNSAQTXXXXXXXXXXXX 612
S I P SHS P+ P LE P G T S + A T
Sbjct: 149 SKSISSPGSHSKAKPPKKPEGNLESQRLPLGNGIQTMAASVQ--RAVTVSSGDVPGSRGA 206
Query: 613 XXXXITRKDLRMHKLVFEEGGLEDGAEVG-YFVRGEKF 649
+ ++ VFE GG + +VG F + KF
Sbjct: 207 VEGILIQQ-------VFESGGSKKCIQVGGEFYKPSKF 237
Score = 46 (21.3 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 28/104 (26%), Positives = 42/104 (40%)
Query: 379 VANDGVGGPVKQETVMKPRKVMRKFYSKLKNFLESGILEGMSVMYIRGSKVKGPGVSGLR 438
+A+ + P P+K S+ + L +GI + M+ R V V G R
Sbjct: 147 LASKSISSPGSHSKAKPPKKPEGNLESQ-RLPLGNGI-QTMAASVQRAVTVSSGDVPGSR 204
Query: 439 GVVKG--------SGISCFCDDCKGNQVVTPAVFELHAGS-SNK 473
G V+G SG S C G + P+ FE +G+ NK
Sbjct: 205 GAVEGILIQQVFESGGSKKCIQV-GGEFYKPSKFEDPSGNLKNK 247
>TAIR|locus:2178828 [details] [associations]
symbol:AT5G58610 "AT5G58610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0042991
"transcription factor import into nucleus" evidence=RCA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 INTERPRO:IPR008395 EMBL:CP002688 GO:GO:0046872
GO:GO:0008270 Gene3D:3.40.630.30 InterPro:IPR016181 SUPFAM:SSF55729
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Pfam:PF05641 InterPro:IPR014002
SMART:SM00743 IPI:IPI00519073 RefSeq:NP_200669.1 UniGene:At.55614
ProteinModelPortal:F4KGA3 SMR:F4KGA3 EnsemblPlants:AT5G58610.1
GeneID:835975 KEGG:ath:AT5G58610 OMA:RITQDWN Uniprot:F4KGA3
Length = 1065
Score = 184 (69.8 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 41/112 (36%), Positives = 56/112 (50%)
Query: 658 GILCTCCNSEVSPSQFEAHAGWASRRKPFQHIYTSNGVSLHELSIKLSLER-----PFSS 712
GI C+CC + + FE HA AS +I+ +G SL E ++ +R P
Sbjct: 626 GIKCSCCRRVFTINGFEVHANGASCSGA-ANIFLDDGRSLLECQVEAYKKRKKAQPPDML 684
Query: 713 K------ENDDLCGICMDGGDLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYC 758
K END C +C GG L+ CD CP AFH +C+ L +P G W C+ C
Sbjct: 685 KMKLRQGENDVFCSVCHYGGKLILCDGCPSAFHANCLGLEDVPDGDWFCQSC 736
>ZFIN|ZDB-GENE-030131-2773 [details] [associations]
symbol:trim33 "tripartite motif-containing 33"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0033333
"fin development" evidence=IMP] [GO:0030218 "erythrocyte
differentiation" evidence=IGI;IMP] [GO:0034243 "regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IGI] [GO:0035162 "embryonic hemopoiesis" evidence=IMP]
[GO:0035166 "post-embryonic hemopoiesis" evidence=IMP] [GO:0060215
"primitive hemopoiesis" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00249 SMART:SM00297 SMART:SM00336
SMART:SM00502 Prosite:PS00518 ZFIN:ZDB-GENE-030131-2773
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 GO:GO:0030218
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370 GO:GO:0034243
GO:GO:0035166 GO:GO:0060215 HOGENOM:HOG000252971 HOVERGEN:HBG054599
GeneTree:ENSGT00530000062982 CTD:51592 KO:K08883 GO:GO:0033333
EMBL:BX321886 IPI:IPI00512685 RefSeq:NP_001002871.2
UniGene:Dr.80165 SMR:B0S5U2 Ensembl:ENSDART00000020116
GeneID:324053 KEGG:dre:324053 NextBio:20808565 Uniprot:B0S5U2
Length = 1176
Score = 174 (66.3 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 29/61 (47%), Positives = 38/61 (62%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDC--VSLPGIPSGTWHCRYCMNTFQKEKFVEYNA 772
N+D C +C +GG+LLCCD CP+ FHI C +L PSG W C +C N E +EYN
Sbjct: 933 NEDWCAVCQNGGELLCCDHCPKVFHITCHIPTLKSSPSGDWMCTFCRNLANPE--IEYNC 990
Query: 773 N 773
+
Sbjct: 991 D 991
Score = 62 (26.9 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 17/44 (38%), Positives = 25/44 (56%)
Query: 61 EVKKLKTYESRKKRKRQEQSVVVKETEDKREEEVKSDVFDVINE 104
E + L Y + + +KR ++ V ET K E E+K VF +INE
Sbjct: 351 EKRGLVEYSASEVQKRLKE---VAETHKKVEHEIKIAVFTLINE 391
Score = 44 (20.5 bits), Expect = 7.5e-08, Sum P(3) = 7.5e-08
Identities = 12/48 (25%), Positives = 18/48 (37%)
Query: 553 SAEIKEPLSHSSEMEPQPPSVELEESPAPSGELTDTSNRSPEPNSAQT 600
+AE +P P PPS + + A + T P P S +
Sbjct: 82 NAESADPPPPPPPPPPPPPSTPADSTAAAASPAVVTEMSPPPPASTSS 129
Score = 44 (20.5 bits), Expect = 7.5e-08, Sum P(3) = 7.5e-08
Identities = 14/51 (27%), Positives = 24/51 (47%)
Query: 521 CLNCRVSFSNAG--VEELMLLCKSCVELKESQAGSAEIKEPLSHSSEMEPQ 569
C +C + S G VE LCK+C+E + + + K + E+ P+
Sbjct: 235 CTSCEDNASAIGFCVECGEWLCKTCIEAHQRVKFTKDHK--IRKKEEVSPE 283
Score = 41 (19.5 bits), Expect = 7.5e-08, Sum P(3) = 7.5e-08
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 158 EEKKNECDEVLMNVEENKYG-ELDGMGGSARTE 189
+ K +C E N+E G E +G GG+ E
Sbjct: 3 DNKGQDCTESSANMEVEASGTEENGDGGAKEPE 35
Score = 41 (19.5 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 564 SEMEPQPPSVELEESPAPSG--ELTDT 588
+EM P PP+ S P+ L DT
Sbjct: 117 TEMSPPPPASTSSSSSTPAAPINLLDT 143
Score = 38 (18.4 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 55 CVLGPPEVKKLKTYESRKKRKRQEQSV 81
C+ VK K ++ RKK + +SV
Sbjct: 259 CIEAHQRVKFTKDHKIRKKEEVSPESV 285
Score = 37 (18.1 bits), Expect = 3.7e-07, Sum P(3) = 3.7e-07
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 571 PSVELEESPAPSGELTDTSNRSP 593
P+V E SP P T +S+ +P
Sbjct: 113 PAVVTEMSPPPPAS-TSSSSSTP 134
Score = 37 (18.1 bits), Expect = 3.7e-07, Sum P(3) = 3.7e-07
Identities = 10/47 (21%), Positives = 17/47 (36%)
Query: 549 SQAGSAEIKEPLSHSSEMEPQPPSVELEESPAPSGELTDTSNRSPEP 595
S G E + ++ +P PP P P D++ + P
Sbjct: 69 SSGGGGEATDGTPNAESADPPPPPPP--PPPPPPSTPADSTAAAASP 113
>UNIPROTKB|F1NMG7 [details] [associations]
symbol:F1NMG7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0045182 "translation regulator activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001965
InterPro:IPR004865 InterPro:IPR008087 InterPro:IPR019787
Pfam:PF00628 Pfam:PF03172 PRINTS:PR01711 PROSITE:PS50016
PROSITE:PS51414 SMART:SM00249 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0006417 GO:GO:0046872 GO:GO:0015629
GO:GO:0008270 GO:GO:0045944 GO:GO:0003682 GO:GO:0045182
GO:GO:0044212 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 OMA:NDDECAV GO:GO:0006959
GeneTree:ENSGT00440000034278 EMBL:AADN02024441 EMBL:AADN02024442
IPI:IPI00575755 Ensembl:ENSGALT00000002020 ArrayExpress:F1NMG7
Uniprot:F1NMG7
Length = 584
Score = 185 (70.2 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 709 PFSSKENDDLCGICMDGGDLLCCDSCPRAFHIDCV--SLPGIPSGTWHCRYCM 759
P ++N+D C +C DGG+L+CCD CPRAFH+ C+ LP +PSGTW C C+
Sbjct: 449 PHPRQDNEDECAVCGDGGELICCDGCPRAFHLPCLVPPLPRVPSGTWQCSSCV 501
Score = 150 (57.9 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 26/59 (44%), Positives = 37/59 (62%)
Query: 705 SLERPFSSKENDDLCGICMDGGDLLCCDSCPRAFHIDCV--SLPGIPSGT----WHCRY 757
S E ++N+D C +C DGG+L+CCD CPRAFH+ C+ LP +PS W+C +
Sbjct: 290 SQEPALYQQDNEDECAVCGDGGELICCDGCPRAFHLPCLVPPLPRVPSPATAPLWNCTH 348
Score = 52 (23.4 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 825 VILCDQCEREYHVGCL 840
+I CD C R +H+ CL
Sbjct: 468 LICCDGCPRAFHLPCL 483
Score = 42 (19.8 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 12/47 (25%), Positives = 20/47 (42%)
Query: 14 LSKIRVGLKREFEFALKVQSEICGSLGRTRARKVQSNVDSGCVLGPP 60
L + G + EF + E G+ R+R+ K S + + PP
Sbjct: 225 LGSTKAGSRARDEFCVPAAGEELGARSRSRSLKPASRPRAPQSVRPP 271
>ZFIN|ZDB-GENE-030131-5913 [details] [associations]
symbol:trim24 "tripartite motif-containing 24"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 Prosite:PS00518
ZFIN:ZDB-GENE-030131-5913 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:AY598454
IPI:IPI00483547 UniGene:Dr.16482 ProteinModelPortal:Q6E2N2
SMR:Q6E2N2 HOVERGEN:HBG097569 ArrayExpress:Q6E2N2 Uniprot:Q6E2N2
Length = 961
Score = 173 (66.0 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 28/62 (45%), Positives = 39/62 (62%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDC--VSLPGIPSGTWHCRYCMNTFQKEKFVEYNA 772
N+D C +C +GG+L+CCD CP+ FH+ C SL PSG W+C C + E ++YN
Sbjct: 696 NEDWCAVCQNGGELICCDKCPKVFHLSCHVPSLTASPSGEWYCTLCRDLNSPE--MQYNV 753
Query: 773 NA 774
NA
Sbjct: 754 NA 755
Score = 60 (26.2 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 18/59 (30%), Positives = 31/59 (52%)
Query: 506 VRMVLGSSSMKKANFCLNCRVSFSNAGVEELMLL---CKSCVELKESQAGSAEIKEPLS 561
VRM++ +++ + C C++SFS+ + L L CK C+ S AG+ + LS
Sbjct: 38 VRMMMMMAALM--DVCPVCKLSFSSREPKLLPCLHSFCKRCLPAHSSPAGTTSTAKQLS 94
Score = 40 (19.1 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 519 NFCLNCRVSFSNAGVEELMLLCKSCVELKESQAGSAEIKE 558
NF + V ++ +E+ LC SC + E+ E E
Sbjct: 113 NFFVKDSVEVPSSTMEKSCQLCMSCDDNTEASGFCVECVE 152
Score = 38 (18.4 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 70 SRKKRKRQEQS-VVVKETEDKREEEVK 95
S K+R+R V+V + E + ++EV+
Sbjct: 631 STKRRRRSSPGPVIVIKDEPEDDDEVR 657
>UNIPROTKB|F1SNJ6 [details] [associations]
symbol:LOC100620590 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0002039 "p53
binding" evidence=IEA] [GO:0071391 "cellular response to estrogen
stimulus" evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IEA] [GO:0070562 "regulation of vitamin D receptor
signaling pathway" evidence=IEA] [GO:0055074 "calcium ion
homeostasis" evidence=IEA] [GO:0046777 "protein
autophosphorylation" evidence=IEA] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0034056 "estrogen response element binding" evidence=IEA]
[GO:0031647 "regulation of protein stability" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005726 "perichromatin
fibrils" evidence=IEA] [GO:0005719 "nuclear euchromatin"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249 SMART:SM00297
GO:GO:0005737 GO:GO:0045892 GO:GO:0045893 GO:GO:0008285
GO:GO:0042981 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0046777 GO:GO:0003682 GO:GO:0004672 GO:GO:0031647
GO:GO:0030163 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005719 GO:GO:0004842 GO:GO:0055074
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0071391 GO:GO:0034056 GO:GO:0070562
GO:GO:0005726 EMBL:FP236752 Ensembl:ENSSSCT00000017986
Uniprot:F1SNJ6
Length = 301
Score = 167 (63.8 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 27/62 (43%), Positives = 40/62 (64%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDC--VSLPGIPSGTWHCRYCMNTFQKEKFVEYNA 772
N+D C +C +GG+LLCC+ CP+ FH+ C +L PSG W C +C + + E VEY+
Sbjct: 76 NEDWCAVCQNGGELLCCEKCPKVFHLSCHVPTLANFPSGEWICTFCRDLSKPE--VEYDC 133
Query: 773 NA 774
+A
Sbjct: 134 DA 135
Score = 47 (21.6 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 13/48 (27%), Positives = 20/48 (41%)
Query: 546 LKESQAGSAEIKEPLSHSSEMEPQPPSVELEESPAPSGELTDTSNRSP 593
L SQ+ ++E S + + P + E S E D S +SP
Sbjct: 16 LNSSQSSASEESVLRSDAPDSTGDQPGLHQETSSTGKSEWLDASQKSP 63
>UNIPROTKB|I3LBT0 [details] [associations]
symbol:I3LBT0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00530000062982 Ensembl:ENSSSCT00000029002
Uniprot:I3LBT0
Length = 945
Score = 172 (65.6 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
Identities = 32/89 (35%), Positives = 52/89 (58%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDC--VSLPGIPSGTWHCRYCMNTFQKEKFVEYNA 772
N+D C +C +GGDLLCC+ CP+ FH+ C +L PSG W C +C + + E VEY+
Sbjct: 704 NEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIGKPE--VEYDC 761
Query: 773 N----ARAAGRIEGVDPFAQMVSRCIRIV 797
+ ++ ++G+ P Q +C R++
Sbjct: 762 DNLQHSKKGKTVQGLSPVDQR--KCERLL 788
Score = 59 (25.8 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
Identities = 22/85 (25%), Positives = 34/85 (40%)
Query: 32 QSEICGSLGRTRARKVQSNVDSGCVLGPPE---VKKLKT---YESRKKRKRQEQSVVVKE 85
+ EIC G + K + S C+L PE L T ES ++ V E
Sbjct: 600 EDEICSFSGAVKQEKTEDGRRSACMLSSPESSLTPPLSTNLHLESELDALASLENHVKTE 659
Query: 86 TEDKREEEVKSDVFDVINERERPIR 110
D E +S + ++N + P+R
Sbjct: 660 PTDMNESCKQSGLSSLVNGKS-PVR 683
Score = 53 (23.7 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 512 SSSMKKANFCLNCRVSFSNAG--VEELMLLCKSCVE 545
SS K C +C + S G VE LCK+C+E
Sbjct: 34 SSDEKSEQVCTSCEDNASAVGFCVECGEWLCKTCIE 69
Score = 52 (23.4 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 83 VKETEDKREEEVKSDVFDVINE 104
V ET + E+E+K +F +INE
Sbjct: 180 VNETNKRVEQEIKVAIFTLINE 201
Score = 39 (18.8 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 28/121 (23%), Positives = 46/121 (38%)
Query: 265 EEVKCEEVGLGKEY--EPGRVQMEMDEEKKNDIERELVENGVLESSMVGKHSSTLCNGES 322
E+ C G K+ E GR M ++ + L N LES + L + E+
Sbjct: 600 EDEICSFSGAVKQEKTEDGRRSACMLSSPESSLTPPLSTNLHLESEL-----DALASLEN 654
Query: 323 NVAKSVAVDGNDEGKTVNVVVERPLRRFTRSLLQQKVELAKGSLSKDGGKRSDVTEVAND 382
+V K+ D N+ K + + RSL+ + + +KD D V +
Sbjct: 655 HV-KTEPTDMNESCKQSGLSSLVNGKSPVRSLMHRSARIGGDGSNKDDDPNEDWCAVCQN 713
Query: 383 G 383
G
Sbjct: 714 G 714
Score = 38 (18.4 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 8/36 (22%), Positives = 17/36 (47%)
Query: 564 SEMEPQPPSVELEESPAPSGELTDTSNRSPEPNSAQ 599
++ Q + +++ PAP T T+ + P + Q
Sbjct: 351 AQKHQQLQQMRMQQPPAPVPTTTATTQQHPRQAAPQ 386
>UNIPROTKB|F1PLN6 [details] [associations]
symbol:TRIM33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070412 "R-SMAD binding" evidence=IEA]
[GO:0070410 "co-SMAD binding" evidence=IEA] [GO:0030514 "negative
regulation of BMP signaling pathway" evidence=IEA] [GO:0017015
"regulation of transforming growth factor beta receptor signaling
pathway" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119 SMART:SM00184
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
Prosite:PS00518 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370 GO:GO:0030514
GO:GO:0017015 GeneTree:ENSGT00530000062982 OMA:PIRSLMH
EMBL:AAEX03010993 Ensembl:ENSCAFT00000015037 Uniprot:F1PLN6
Length = 995
Score = 170 (64.9 bits), Expect = 7.8e-10, Sum P(2) = 7.8e-10
Identities = 35/96 (36%), Positives = 55/96 (57%)
Query: 711 SSKE---NDDLCGICMDGGDLLCCDSCPRAFHIDC--VSLPGIPSGTWHCRYCMNTFQKE 765
SSK+ N+D C +C +GGDLLCC+ CP+ FH+ C +L PSG W C +C + + E
Sbjct: 747 SSKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIGKPE 806
Query: 766 KFVEYNAN----ARAAGRIEGVDPFAQMVSRCIRIV 797
VEY+ + ++ +G+ P Q +C R++
Sbjct: 807 --VEYDCDNLQHSKKGKTAQGLSPVDQR--KCERLL 838
Score = 61 (26.5 bits), Expect = 7.8e-10, Sum P(2) = 7.8e-10
Identities = 28/115 (24%), Positives = 47/115 (40%)
Query: 2 ANGTDSEEKFVVLSKIRVGLKREFEFALKVQSEICGSLGRTRARKVQSNVDSGCVLGPPE 61
++G +E+ + +V +K+E + EIC G + K + S C+L PE
Sbjct: 624 SSGRTAEKTSLSFKSDQVKVKQE----PGTEDEICSFSGAVKQEKTEDGRRSACMLSSPE 679
Query: 62 ---VKKLKT---YESRKKRKRQEQSVVVKETEDKREEEVKSDVFDVINERERPIR 110
L T ES ++ V E D E +S + ++N + PIR
Sbjct: 680 SSLTPPLSTNLHLESELDALASLENHVKTEPADTNESCKQSGLSSLVNGKS-PIR 733
Score = 54 (24.1 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 21/66 (31%), Positives = 29/66 (43%)
Query: 512 SSSMKKANFCLNCRVSFSNAG--VEELMLLCKSCVE----LKESQAGSAEIKEPLSHSSE 565
SS K C +C + S G VE LCK+C+E +K ++ KE +S S
Sbjct: 76 SSDEKSEQVCTSCEDNASAVGFCVECGEWLCKTCIEAHQRVKFTKDHLIRKKEDVSESVG 135
Query: 566 MEPQPP 571
Q P
Sbjct: 136 ASGQRP 141
Score = 53 (23.7 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 66 KTYESRKKRKRQEQSVVVKETEDKREEEVKSDVFDVINE 104
K Y + Q + V ET + E+E+K +F +INE
Sbjct: 202 KNYVHFAATQVQNRIKEVNETNKRVEQEIKVAIFTLINE 240
Score = 41 (19.5 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 8/36 (22%), Positives = 17/36 (47%)
Query: 564 SEMEPQPPSVELEESPAPSGELTDTSNRSPEPNSAQ 599
++ Q + +++ PAP T T+ + P + Q
Sbjct: 393 AQKHQQLQQMRMQQPPAPVSTTTTTTQQHPRQAAPQ 428
Score = 39 (18.8 bits), Expect = 2.1e-08, Sum P(3) = 2.1e-08
Identities = 29/121 (23%), Positives = 46/121 (38%)
Query: 265 EEVKCEEVGLGKEY--EPGRVQMEMDEEKKNDIERELVENGVLESSMVGKHSSTLCNGES 322
E+ C G K+ E GR M ++ + L N LES + L + E+
Sbjct: 650 EDEICSFSGAVKQEKTEDGRRSACMLSSPESSLTPPLSTNLHLESEL-----DALASLEN 704
Query: 323 NVAKSVAVDGNDEGKTVNVVVERPLRRFTRSLLQQKVELAKGSLSKDGGKRSDVTEVAND 382
+V K+ D N+ K + + RSL+ + + SKD D V +
Sbjct: 705 HV-KTEPADTNESCKQSGLSSLVNGKSPIRSLVHRSSRIGGDGSSKDDDPNEDWCAVCQN 763
Query: 383 G 383
G
Sbjct: 764 G 764
>MGI|MGI:1338803 [details] [associations]
symbol:Aire "autoimmune regulator (autoimmune
polyendocrinopathy candidiasis ectodermal dystrophy)" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0005622 "intracellular"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006959 "humoral
immune response" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0045182 "translation regulator activity" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP;IDA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000770 InterPro:IPR001965 InterPro:IPR004865
InterPro:IPR008087 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342
Pfam:PF03172 PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864
PROSITE:PS51414 SMART:SM00184 SMART:SM00249 SMART:SM00258
MGI:MGI:1338803 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
GO:GO:0006417 GO:GO:0046872 GO:GO:0015629 GO:GO:0008270
GO:GO:0045944 GO:GO:0006351 GO:GO:0003682 GO:GO:0045182
GO:GO:0044212 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 CTD:326 eggNOG:NOG317492 HOVERGEN:HBG014961
KO:K10603 OMA:NDDECAV GO:GO:0042393 GO:GO:0006959
Gene3D:3.10.390.10 InterPro:IPR010919 SUPFAM:SSF63763 EMBL:AF105002
EMBL:AF128772 EMBL:AF128773 EMBL:AJ007715 EMBL:AF079536
EMBL:AJ132243 EMBL:AF128115 EMBL:AF128116 EMBL:AF128117
EMBL:AF128118 EMBL:AF128119 EMBL:AF128120 EMBL:AF128121
EMBL:AF128122 EMBL:AF128123 EMBL:AF128124 EMBL:AF128125
EMBL:AJ243821 IPI:IPI00129025 IPI:IPI00223523 IPI:IPI00223524
IPI:IPI00223525 IPI:IPI00230215 IPI:IPI00230216 IPI:IPI00230217
IPI:IPI00230218 IPI:IPI00230219 IPI:IPI00230220 IPI:IPI00230221
IPI:IPI00400171 RefSeq:NP_001258478.1 RefSeq:NP_001258479.1
RefSeq:NP_001258480.1 RefSeq:NP_001258481.1 RefSeq:NP_001258482.1
RefSeq:NP_001258483.1 RefSeq:NP_001258484.1 RefSeq:NP_001258485.1
RefSeq:NP_001258486.1 RefSeq:NP_001258487.1 RefSeq:NP_001258488.1
RefSeq:NP_033776.1 UniGene:Mm.35300 ProteinModelPortal:Q9Z0E3
SMR:Q9Z0E3 DIP:DIP-31030N IntAct:Q9Z0E3 STRING:Q9Z0E3
PhosphoSite:Q9Z0E3 PRIDE:Q9Z0E3 Ensembl:ENSMUST00000019257
Ensembl:ENSMUST00000105395 Ensembl:ENSMUST00000105396
Ensembl:ENSMUST00000128241 Ensembl:ENSMUST00000130972
Ensembl:ENSMUST00000140636 Ensembl:ENSMUST00000145975
Ensembl:ENSMUST00000148469 Ensembl:ENSMUST00000154374
Ensembl:ENSMUST00000155021 Ensembl:ENSMUST00000156417 GeneID:11634
KEGG:mmu:11634 UCSC:uc007fws.1 UCSC:uc007fwt.1 UCSC:uc007fwu.1
UCSC:uc007fwv.1 UCSC:uc007fww.1 UCSC:uc007fwx.1 UCSC:uc007fwz.1
UCSC:uc007fxa.1 UCSC:uc007fxb.1 GeneTree:ENSGT00440000034278
InParanoid:Q9Z0E3 ChiTaRS:AIRE NextBio:279201 Bgee:Q9Z0E3
Genevestigator:Q9Z0E3 GermOnline:ENSMUSG00000000731 Uniprot:Q9Z0E3
Length = 552
Score = 177 (67.4 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 709 PFSSKENDDLCGICMDGGDLLCCDSCPRAFHIDCVSLP--GIPSGTWHCRYCM 759
P +++N+D C +C DGG+L+CCD CPRAFH+ C+S P IPSG W C C+
Sbjct: 291 PQVNQKNEDECAVCHDGGELICCDGCPRAFHLACLSPPLQEIPSGLWRCSCCL 343
Score = 45 (20.9 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 30/104 (28%), Positives = 41/104 (39%)
Query: 379 VANDGVGGPVKQETVMKPRKVMRKFYSKLKNFLESGILEGMSVMYIRGSKVKGPGVSGLR 438
+A+ V P P+K S+ L +GI + M+ R V V G R
Sbjct: 147 LASKSVSSPGSHLKTKPPKKPDGNLESQHLP-LGNGI-QTMAASVQRAVTVASGDVPGTR 204
Query: 439 GVVKG--------SGISCFCDDCKGNQVVTPAVFELHAGS-SNK 473
G V+G SG S C G + TP FE +G+ NK
Sbjct: 205 GAVEGILIQQVFESGRSKKCIQV-GGEFYTPNKFEDPSGNLKNK 247
Score = 44 (20.5 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 10/31 (32%), Positives = 12/31 (38%)
Query: 553 SAEIKEPLSHSSEMEPQPPSVELEESPAPSG 583
S + P SH P+ P LE P G
Sbjct: 149 SKSVSSPGSHLKTKPPKKPDGNLESQHLPLG 179
>UNIPROTKB|E7EN20 [details] [associations]
symbol:TRIM33 "E3 ubiquitin-protein ligase TRIM33"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249 SMART:SM00297
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 EMBL:AL390241 EMBL:AL035410 HGNC:HGNC:16290
ChiTaRS:TRIM33 IPI:IPI00748247 ProteinModelPortal:E7EN20 SMR:E7EN20
Ensembl:ENST00000450349 UCSC:uc010owr.2 ArrayExpress:E7EN20
Bgee:E7EN20 Uniprot:E7EN20
Length = 759
Score = 168 (64.2 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 32/89 (35%), Positives = 51/89 (57%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDC--VSLPGIPSGTWHCRYCMNTFQKEKFVEYNA 772
N+D C +C +GGDLLCC+ CP+ FH+ C +L PSG W C +C + + E VEY+
Sbjct: 518 NEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIGKPE--VEYDC 575
Query: 773 N----ARAAGRIEGVDPFAQMVSRCIRIV 797
+ ++ +G+ P Q +C R++
Sbjct: 576 DNLQHSKKGKTAQGLSPVDQR--KCERLL 602
Score = 58 (25.5 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 28/115 (24%), Positives = 47/115 (40%)
Query: 2 ANGTDSEEKFVVLSKIRVGLKREFEFALKVQSEICGSLGRTRARKVQSNVDSGCVLGPPE 61
++G +E+ + +V +K+E + EIC G + K + S C+L PE
Sbjct: 388 SSGRTAEKTSLSFKSDQVKVKQE----PGTEDEICSFSGGVKQEKTEDGRRSACMLSSPE 443
Query: 62 ---VKKLKT---YESRKKRKRQEQSVVVKETEDKREEEVKSDVFDVINERERPIR 110
L T ES ++ V E D E +S + ++N + PIR
Sbjct: 444 SSLTPPLSTNLHLESELDALASLENHVKIEPADMNESCKQSGLSSLVNGKS-PIR 497
Score = 39 (18.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 8/36 (22%), Positives = 17/36 (47%)
Query: 564 SEMEPQPPSVELEESPAPSGELTDTSNRSPEPNSAQ 599
++ Q + +++ PAP T T+ + P + Q
Sbjct: 133 AQKHQQLQQMRMQQPPAPVPTTTTTTQQHPRQAAPQ 168
>UNIPROTKB|H0YF52 [details] [associations]
symbol:TRIM66 "Tripartite motif-containing protein 66"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249 SMART:SM00297
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:AC091053
EMBL:AC104360 HGNC:HGNC:29005 Ensembl:ENST00000530502
Uniprot:H0YF52
Length = 286
Score = 166 (63.5 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 29/64 (45%), Positives = 40/64 (62%)
Query: 714 ENDDLCGICMDGGDLLCCDSCPRAFHIDC--VSLPGIPSGTWHCRYCMNTFQKEKFVEYN 771
EN+D C +C++GG+LLCCD CP+ FH+ C +L P G W C C + Q E +EY+
Sbjct: 100 ENEDFCAVCLNGGELLCCDRCPKVFHLSCHVPALLSFPGGEWVCTLCRSLTQPE--MEYD 157
Query: 772 A-NA 774
NA
Sbjct: 158 CENA 161
>UNIPROTKB|H0Y612 [details] [associations]
symbol:TRIM33 "E3 ubiquitin-protein ligase TRIM33"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:AL390241
EMBL:AL035410 HGNC:HGNC:16290 ChiTaRS:TRIM33
ProteinModelPortal:H0Y612 PRIDE:H0Y612 Ensembl:ENST00000448034
Bgee:H0Y612 Uniprot:H0Y612
Length = 888
Score = 168 (64.2 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 32/89 (35%), Positives = 51/89 (57%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDC--VSLPGIPSGTWHCRYCMNTFQKEKFVEYNA 772
N+D C +C +GGDLLCC+ CP+ FH+ C +L PSG W C +C + + E VEY+
Sbjct: 647 NEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIGKPE--VEYDC 704
Query: 773 N----ARAAGRIEGVDPFAQMVSRCIRIV 797
+ ++ +G+ P Q +C R++
Sbjct: 705 DNLQHSKKGKTAQGLSPVDQR--KCERLL 731
Score = 58 (25.5 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 28/115 (24%), Positives = 47/115 (40%)
Query: 2 ANGTDSEEKFVVLSKIRVGLKREFEFALKVQSEICGSLGRTRARKVQSNVDSGCVLGPPE 61
++G +E+ + +V +K+E + EIC G + K + S C+L PE
Sbjct: 517 SSGRTAEKTSLSFKSDQVKVKQE----PGTEDEICSFSGGVKQEKTEDGRRSACMLSSPE 572
Query: 62 ---VKKLKT---YESRKKRKRQEQSVVVKETEDKREEEVKSDVFDVINERERPIR 110
L T ES ++ V E D E +S + ++N + PIR
Sbjct: 573 SSLTPPLSTNLHLESELDALASLENHVKIEPADMNESCKQSGLSSLVNGKS-PIR 626
Score = 53 (23.7 bits), Expect = 2.3e-08, Sum P(3) = 2.3e-08
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 66 KTYESRKKRKRQEQSVVVKETEDKREEEVKSDVFDVINE 104
K Y + Q + V ET + E+E+K +F +INE
Sbjct: 71 KNYVHFAATQVQNRIKEVNETNKRVEQEIKVAIFTLINE 109
Score = 39 (18.8 bits), Expect = 2.3e-08, Sum P(3) = 2.3e-08
Identities = 8/36 (22%), Positives = 17/36 (47%)
Query: 564 SEMEPQPPSVELEESPAPSGELTDTSNRSPEPNSAQ 599
++ Q + +++ PAP T T+ + P + Q
Sbjct: 262 AQKHQQLQQMRMQQPPAPVPTTTTTTQQHPRQAAPQ 297
>UNIPROTKB|F1MNE1 [details] [associations]
symbol:TRIM33 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070412 "R-SMAD binding" evidence=IEA] [GO:0070410
"co-SMAD binding" evidence=IEA] [GO:0030514 "negative regulation of
BMP signaling pathway" evidence=IEA] [GO:0017015 "regulation of
transforming growth factor beta receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
Pfam:PF13639 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 Prosite:PS00518
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR017907
Gene3D:1.20.920.10 SUPFAM:SSF47370 GO:GO:0030514 GO:GO:0017015
GeneTree:ENSGT00530000062982 CTD:51592 KO:K08883 OMA:PIRSLMH
EMBL:DAAA02007465 EMBL:DAAA02007466 EMBL:DAAA02007467
IPI:IPI00717094 RefSeq:NP_001192947.1 UniGene:Bt.91873
ProteinModelPortal:F1MNE1 PRIDE:F1MNE1 Ensembl:ENSBTAT00000001967
GeneID:533296 KEGG:bta:533296 NextBio:20875989 Uniprot:F1MNE1
Length = 1126
Score = 170 (64.9 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 35/96 (36%), Positives = 55/96 (57%)
Query: 711 SSKE---NDDLCGICMDGGDLLCCDSCPRAFHIDC--VSLPGIPSGTWHCRYCMNTFQKE 765
SSK+ N+D C +C +GGDLLCC+ CP+ FH+ C +L PSG W C +C + + E
Sbjct: 878 SSKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIGKPE 937
Query: 766 KFVEYNAN----ARAAGRIEGVDPFAQMVSRCIRIV 797
VEY+ + ++ +G+ P Q +C R++
Sbjct: 938 --VEYDCDNLQHSKKGKTAQGLSPVDQR--KCERLL 969
Score = 58 (25.5 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 22/85 (25%), Positives = 34/85 (40%)
Query: 32 QSEICGSLGRTRARKVQSNVDSGCVLGPPE---VKKLKT---YESRKKRKRQEQSVVVKE 85
+ EIC G + K + S C+L PE L T ES ++ V E
Sbjct: 781 EDEICSFSGAVKQEKTEDGRRSACMLSSPESSLTPPLSTNLHLESELDTLTSLENHVKTE 840
Query: 86 TEDKREEEVKSDVFDVINERERPIR 110
D E +S + ++N + P+R
Sbjct: 841 PADMNESCKQSGLNSLVNGKS-PVR 864
Score = 54 (24.1 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 21/66 (31%), Positives = 29/66 (43%)
Query: 512 SSSMKKANFCLNCRVSFSNAG--VEELMLLCKSCVE----LKESQAGSAEIKEPLSHSSE 565
SS K C +C + S G VE LCK+C+E +K ++ KE +S S
Sbjct: 208 SSDEKSEQVCTSCEDNASAVGFCVECGEWLCKTCIEAHQRVKFTKDHLIRKKEDVSESVG 267
Query: 566 MEPQPP 571
Q P
Sbjct: 268 ASGQRP 273
Score = 53 (23.7 bits), Expect = 3.3e-09, Sum P(3) = 3.3e-09
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 66 KTYESRKKRKRQEQSVVVKETEDKREEEVKSDVFDVINE 104
K Y + Q + V ET + E+E+K +F +INE
Sbjct: 334 KNYVHFAATQVQNRIKEVNETNKRVEQEIKVAIFTLINE 372
Score = 49 (22.3 bits), Expect = 3.3e-09, Sum P(3) = 3.3e-09
Identities = 32/123 (26%), Positives = 50/123 (40%)
Query: 265 EEVKCEEVGLGKEY--EPGRVQMEMDEEKKNDIERELVENGVLESSMVGKHSSTLCNGES 322
E+ C G K+ E GR M ++ + L N LES + TL + E+
Sbjct: 781 EDEICSFSGAVKQEKTEDGRRSACMLSSPESSLTPPLSTNLHLESEL-----DTLTSLEN 835
Query: 323 NVAKSVAVDGNDEGKT--VNVVVERPLRRFTRSLLQQKVELAKGSLSKDGGKRSDVTEVA 380
+V K+ D N+ K +N +V + RSL+ + + SKD D V
Sbjct: 836 HV-KTEPADMNESCKQSGLNSLVNG--KSPVRSLMHRSARIGGDGSSKDDDPNEDWCAVC 892
Query: 381 NDG 383
+G
Sbjct: 893 QNG 895
>UNIPROTKB|F1P5H8 [details] [associations]
symbol:TRIM33 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0017015 "regulation of
transforming growth factor beta receptor signaling pathway"
evidence=IEA] [GO:0030514 "negative regulation of BMP signaling
pathway" evidence=IEA] [GO:0070410 "co-SMAD binding" evidence=IEA]
[GO:0070412 "R-SMAD binding" evidence=IEA] InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 GO:GO:0030514 GO:GO:0017015
GeneTree:ENSGT00530000062982 OMA:PIRSLMH EMBL:AADN02045019
IPI:IPI00589805 Ensembl:ENSGALT00000003070 Uniprot:F1P5H8
Length = 947
Score = 169 (64.5 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 32/89 (35%), Positives = 51/89 (57%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDC--VSLPGIPSGTWHCRYCMNTFQKEKFVEYNA 772
N+D C +C +GGDLLCC+ CP+ FH+ C +L PSG W C +C + + E VEY+
Sbjct: 723 NEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDLSKPE--VEYDC 780
Query: 773 N----ARAAGRIEGVDPFAQMVSRCIRIV 797
+ ++ +G+ P Q +C R++
Sbjct: 781 DNLQHSKKGKTAQGLSPVDQR--KCERLL 807
Score = 56 (24.8 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 16/60 (26%), Positives = 27/60 (45%)
Query: 2 ANGTDSEEKFVVLSKIRVGLKREFEFALKVQSEICGSLGRTRARKVQSNVDSGCVLGPPE 61
++G +E+ V +V +K+E + EIC G + K + S C+L PE
Sbjct: 594 SSGRTAEKTSVNFKSDQVKVKQE----PGTEEEICSFSGAVKQEKTEDGRRSACMLSSPE 649
Score = 55 (24.4 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 66 KTYESRKKRKRQEQSVVVKETEDKREEEVKSDVFDVINE 104
K Y + + Q + V ET + E+E+K +F +INE
Sbjct: 182 KNYVNFAATQVQNRIKEVNETNKRVEQEIKVAIFTLINE 220
Score = 54 (24.1 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 19/60 (31%), Positives = 28/60 (46%)
Query: 512 SSSMKKANFCLNCRVSFSNAG--VEELMLLCKSCVELKESQAGSAE--IKEPLSHSSEME 567
SS K C +C + S G VE LCK+C+E + + + I++ SSE E
Sbjct: 53 SSDEKSEQVCTSCEDNASAVGFCVECGEWLCKTCIEAHQRVKFTKDHMIRKKEDVSSETE 112
>UNIPROTKB|Q9UPN9 [details] [associations]
symbol:TRIM33 "E3 ubiquitin-protein ligase TRIM33"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0008270 "zinc ion binding" evidence=NAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0017015
"regulation of transforming growth factor beta receptor signaling
pathway" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030514 "negative regulation of BMP signaling pathway"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006351 "transcription,
DNA-dependent" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0007179
"transforming growth factor beta receptor signaling pathway"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070410 "co-SMAD
binding" evidence=IPI] [GO:0070412 "R-SMAD binding" evidence=IPI]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] Reactome:REACT_71
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 Pfam:PF13639 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00249 SMART:SM00297 SMART:SM00336
SMART:SM00502 UniPathway:UPA00143 EMBL:AF119043 Prosite:PS00518
Reactome:REACT_111102 GO:GO:0005654 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0000122 GO:GO:0007179 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0004842 GO:GO:0006367
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 GO:GO:0030514 GO:GO:0017015
MIM:188550 Orphanet:146 PDB:3U5N PDB:3U5O PDB:3U5P PDBsum:3U5N
PDBsum:3U5O PDBsum:3U5P EMBL:AL390241 HOVERGEN:HBG054599
EMBL:AF220136 EMBL:AF220137 EMBL:AB029036 EMBL:AL035410
EMBL:AJ132948 IPI:IPI00010252 IPI:IPI00221114 RefSeq:NP_056990.3
RefSeq:NP_148980.2 UniGene:Hs.26837 PDB:3U5M PDBsum:3U5M
ProteinModelPortal:Q9UPN9 SMR:Q9UPN9 DIP:DIP-54262N IntAct:Q9UPN9
STRING:Q9UPN9 PhosphoSite:Q9UPN9 DMDM:12643365 PaxDb:Q9UPN9
PRIDE:Q9UPN9 Ensembl:ENST00000358465 Ensembl:ENST00000369543
GeneID:51592 KEGG:hsa:51592 UCSC:uc001eew.3 UCSC:uc001eex.3
CTD:51592 GeneCards:GC01M114935 H-InvDB:HIX0000910 HGNC:HGNC:16290
HPA:HPA004345 MIM:605769 neXtProt:NX_Q9UPN9 PharmGKB:PA38118
InParanoid:Q9UPN9 KO:K08883 OMA:PIRSLMH OrthoDB:EOG4SN1N0
PhylomeDB:Q9UPN9 ChiTaRS:TRIM33 GenomeRNAi:51592 NextBio:55433
PMAP-CutDB:Q9UPN9 ArrayExpress:Q9UPN9 Bgee:Q9UPN9 CleanEx:HS_TRIM33
Genevestigator:Q9UPN9 GermOnline:ENSG00000197323 Uniprot:Q9UPN9
Length = 1127
Score = 168 (64.2 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 32/89 (35%), Positives = 51/89 (57%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDC--VSLPGIPSGTWHCRYCMNTFQKEKFVEYNA 772
N+D C +C +GGDLLCC+ CP+ FH+ C +L PSG W C +C + + E VEY+
Sbjct: 886 NEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIGKPE--VEYDC 943
Query: 773 N----ARAAGRIEGVDPFAQMVSRCIRIV 797
+ ++ +G+ P Q +C R++
Sbjct: 944 DNLQHSKKGKTAQGLSPVDQR--KCERLL 970
Score = 58 (25.5 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 28/115 (24%), Positives = 47/115 (40%)
Query: 2 ANGTDSEEKFVVLSKIRVGLKREFEFALKVQSEICGSLGRTRARKVQSNVDSGCVLGPPE 61
++G +E+ + +V +K+E + EIC G + K + S C+L PE
Sbjct: 756 SSGRTAEKTSLSFKSDQVKVKQE----PGTEDEICSFSGGVKQEKTEDGRRSACMLSSPE 811
Query: 62 ---VKKLKT---YESRKKRKRQEQSVVVKETEDKREEEVKSDVFDVINERERPIR 110
L T ES ++ V E D E +S + ++N + PIR
Sbjct: 812 SSLTPPLSTNLHLESELDALASLENHVKIEPADMNESCKQSGLSSLVNGKS-PIR 865
Score = 54 (24.1 bits), Expect = 4.3e-08, Sum P(3) = 4.3e-08
Identities = 21/66 (31%), Positives = 29/66 (43%)
Query: 512 SSSMKKANFCLNCRVSFSNAG--VEELMLLCKSCVE----LKESQAGSAEIKEPLSHSSE 565
SS K C +C + S G VE LCK+C+E +K ++ KE +S S
Sbjct: 208 SSDEKSEQVCTSCEDNASAVGFCVECGEWLCKTCIEAHQRVKFTKDHLIRKKEDVSESVG 267
Query: 566 MEPQPP 571
Q P
Sbjct: 268 ASGQRP 273
Score = 53 (23.7 bits), Expect = 5.4e-08, Sum P(3) = 5.4e-08
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 66 KTYESRKKRKRQEQSVVVKETEDKREEEVKSDVFDVINE 104
K Y + Q + V ET + E+E+K +F +INE
Sbjct: 334 KNYVHFAATQVQNRIKEVNETNKRVEQEIKVAIFTLINE 372
Score = 39 (18.8 bits), Expect = 4.3e-08, Sum P(3) = 4.3e-08
Identities = 8/36 (22%), Positives = 17/36 (47%)
Query: 564 SEMEPQPPSVELEESPAPSGELTDTSNRSPEPNSAQ 599
++ Q + +++ PAP T T+ + P + Q
Sbjct: 525 AQKHQQLQQMRMQQPPAPVPTTTTTTQQHPRQAAPQ 560
>RGD|1307339 [details] [associations]
symbol:Trim33 "tripartite motif-containing 33" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0017015 "regulation of transforming growth factor
beta receptor signaling pathway" evidence=ISO] [GO:0030514
"negative regulation of BMP signaling pathway" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0070410 "co-SMAD binding" evidence=ISO]
[GO:0070412 "R-SMAD binding" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
Pfam:PF13639 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 RGD:1307339
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00530000062982 IPI:IPI00957392
Ensembl:ENSRNOT00000025600 UCSC:RGD:1307339 NextBio:688291
ArrayExpress:D3ZUM5 Uniprot:D3ZUM5
Length = 1127
Score = 168 (64.2 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 32/89 (35%), Positives = 51/89 (57%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDC--VSLPGIPSGTWHCRYCMNTFQKEKFVEYNA 772
N+D C +C +GGDLLCC+ CP+ FH+ C +L PSG W C +C + + E VEY+
Sbjct: 903 NEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIGKPE--VEYDC 960
Query: 773 N----ARAAGRIEGVDPFAQMVSRCIRIV 797
+ ++ +G+ P Q +C R++
Sbjct: 961 DNMQHSKKGKTAQGLSPVDQR--KCERLL 987
Score = 57 (25.1 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 23/85 (27%), Positives = 34/85 (40%)
Query: 32 QSEICGSLGRTRARKVQSNVDSGCVLGPPE---VKKLKT---YESRKKRKRQEQSVVVKE 85
+ EIC G + K + S C+L PE L T ES ++ V E
Sbjct: 799 EEEICSFSGAVKQEKTEDGRRSACMLSSPESSLTPPLSTNLHLESELDTLTSLENHVKTE 858
Query: 86 TEDKREEEVKSDVFDVINERERPIR 110
D E +S + ++N + PIR
Sbjct: 859 PADISESCKQSGLSSLVNGKS-PIR 882
Score = 54 (24.1 bits), Expect = 2.7e-08, Sum P(3) = 2.7e-08
Identities = 21/66 (31%), Positives = 29/66 (43%)
Query: 512 SSSMKKANFCLNCRVSFSNAG--VEELMLLCKSCVE----LKESQAGSAEIKEPLSHSSE 565
SS K C +C + S G VE LCK+C+E +K ++ KE +S S
Sbjct: 226 SSDEKSEQVCTSCEDNASAVGFCVECGEWLCKTCIEAHQRVKFTKDHLIRKKEDVSESVG 285
Query: 566 MEPQPP 571
Q P
Sbjct: 286 TSGQRP 291
Score = 53 (23.7 bits), Expect = 3.4e-08, Sum P(3) = 3.4e-08
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 66 KTYESRKKRKRQEQSVVVKETEDKREEEVKSDVFDVINE 104
K Y + Q + V ET + E+E+K +F +INE
Sbjct: 352 KNYVHFAATQVQNRIKEVNETNKRVEQEIKVAIFTLINE 390
Score = 41 (19.5 bits), Expect = 2.7e-08, Sum P(3) = 2.7e-08
Identities = 9/36 (25%), Positives = 17/36 (47%)
Query: 564 SEMEPQPPSVELEESPAPSGELTDTSNRSPEPNSAQ 599
++ Q + L++ PAP T T+ + P + Q
Sbjct: 543 AQKHQQLQQMRLQQPPAPVPTTTTTTQQHPRQAAPQ 578
Score = 37 (18.1 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 7/14 (50%), Positives = 8/14 (57%)
Query: 36 CGSLGRTRARKVQS 49
CGS GRT + S
Sbjct: 771 CGSSGRTAEKSAHS 784
>UNIPROTKB|F1NBP6 [details] [associations]
symbol:F1NBP6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0010369 "chromocenter"
evidence=IEA] [GO:0016235 "aggresome" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
Prosite:PS00518 GO:GO:0005634 GO:GO:0045892 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0016235 InterPro:IPR017907 Gene3D:1.20.920.10
SUPFAM:SSF47370 GO:GO:0010369 GeneTree:ENSGT00530000062982
OMA:HMENERA EMBL:AADN02030565 IPI:IPI00595769
Ensembl:ENSGALT00000009581 Uniprot:F1NBP6
Length = 1025
Score = 183 (69.5 bits), Expect = 5.1e-09, Sum P(3) = 5.1e-09
Identities = 37/97 (38%), Positives = 55/97 (56%)
Query: 707 ERPFSSKENDDLCGICMDGGDLLCCDSCPRAFHIDC--VSLPGIPSGTWHCRYCMNTFQK 764
E+ ++ EN+D C +C++GG+LLCCD CP+ FH+ C +L P G W C C N +
Sbjct: 774 EKEVNTIENEDFCAVCLNGGELLCCDHCPKVFHLSCHVPALLSFPVGEWVCTLCRNPMKP 833
Query: 765 EKFVEYNA-NARAAGRIE---GVDPFAQMVSRCIRIV 797
E VEY+ N R A G+D + Q +C ++V
Sbjct: 834 E--VEYDCENTRYAHSYNAQYGLDDYDQ--KKCEKLV 866
Score = 46 (21.3 bits), Expect = 5.1e-09, Sum P(3) = 5.1e-09
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 562 HSSEMEPQPPSVELEESPAPS-----GELTDTSNRSPEPNSAQT 600
+S+E++ Q P+V L+ S S E S+ SP S Q+
Sbjct: 564 NSTELDAQKPAVPLDRSKISSMSQSLDEEVSVSSHSPGTTSQQS 607
Score = 39 (18.8 bits), Expect = 5.1e-09, Sum P(3) = 5.1e-09
Identities = 10/23 (43%), Positives = 17/23 (73%)
Query: 61 EVKKLKTYESRKKRKRQEQSVVV 83
+++K+ T E R+K ++Q Q VVV
Sbjct: 265 QLEKI-TNERRQKLEQQLQGVVV 286
>MGI|MGI:2137357 [details] [associations]
symbol:Trim33 "tripartite motif-containing 33" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0017015 "regulation
of transforming growth factor beta receptor signaling pathway"
evidence=ISO] [GO:0030514 "negative regulation of BMP signaling
pathway" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0070410 "co-SMAD binding" evidence=ISO]
[GO:0070412 "R-SMAD binding" evidence=ISO] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 Pfam:PF13639 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
UniPathway:UPA00143 MGI:MGI:2137357 Prosite:PS00518 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0016874
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0070412 InterPro:IPR017907
Gene3D:1.20.920.10 SUPFAM:SSF47370 eggNOG:COG5076 GO:GO:0030514
GO:GO:0017015 GO:GO:0070410 HOGENOM:HOG000252971 HOVERGEN:HBG054599
CTD:51592 KO:K08883 OrthoDB:EOG4SN1N0 EMBL:AY458590 EMBL:AK129293
EMBL:AF220138 IPI:IPI00409904 IPI:IPI00480381 RefSeq:NP_001073299.1
RefSeq:NP_444400.2 UniGene:Mm.195036 ProteinModelPortal:Q99PP7
SMR:Q99PP7 DIP:DIP-59674N IntAct:Q99PP7 STRING:Q99PP7
PhosphoSite:Q99PP7 PaxDb:Q99PP7 PRIDE:Q99PP7 GeneID:94093
KEGG:mmu:94093 UCSC:uc008qsv.1 UCSC:uc008qsw.1 InParanoid:Q99PP7
NextBio:352085 Bgee:Q99PP7 CleanEx:MM_TRIM33 Genevestigator:Q99PP7
GermOnline:ENSMUSG00000033014 Uniprot:Q99PP7
Length = 1142
Score = 168 (64.2 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 32/89 (35%), Positives = 51/89 (57%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDC--VSLPGIPSGTWHCRYCMNTFQKEKFVEYNA 772
N+D C +C +GGDLLCC+ CP+ FH+ C +L PSG W C +C + + E VEY+
Sbjct: 901 NEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIGKPE--VEYDC 958
Query: 773 N----ARAAGRIEGVDPFAQMVSRCIRIV 797
+ ++ +G+ P Q +C R++
Sbjct: 959 DNMQHSKKGKTAQGLSPVDQR--KCERLL 985
Score = 56 (24.8 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 23/85 (27%), Positives = 35/85 (41%)
Query: 32 QSEICGSLGRTRARKVQSNVDSGCVLGPPE---VKKLKT---YESRKKRKRQEQSVVVKE 85
+ EIC G + K + S C+L PE L T ES ++ V E
Sbjct: 797 EEEICSFSGAVKQEKTEDGRRSACMLSSPESSLTPPLSTNLHLESELDTLTGLENHVKTE 856
Query: 86 TEDKREEEVKSDVFDVINERERPIR 110
D E +S + +++N + PIR
Sbjct: 857 PTDISESCKQSGLSNLVNGKS-PIR 880
Score = 54 (24.1 bits), Expect = 3.6e-08, Sum P(3) = 3.6e-08
Identities = 21/66 (31%), Positives = 29/66 (43%)
Query: 512 SSSMKKANFCLNCRVSFSNAG--VEELMLLCKSCVE----LKESQAGSAEIKEPLSHSSE 565
SS K C +C + S G VE LCK+C+E +K ++ KE +S S
Sbjct: 224 SSDEKSEQVCTSCEDNASAVGFCVECGEWLCKTCIEAHQRVKFTKDHLIRKKEDVSESVG 283
Query: 566 MEPQPP 571
Q P
Sbjct: 284 TSGQRP 289
Score = 53 (23.7 bits), Expect = 4.5e-08, Sum P(3) = 4.5e-08
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 66 KTYESRKKRKRQEQSVVVKETEDKREEEVKSDVFDVINE 104
K Y + Q + V ET + E+E+K +F +INE
Sbjct: 350 KNYVHFAATQVQNRIKEVNETNKRVEQEIKVAIFTLINE 388
Score = 40 (19.1 bits), Expect = 3.6e-08, Sum P(3) = 3.6e-08
Identities = 9/36 (25%), Positives = 17/36 (47%)
Query: 564 SEMEPQPPSVELEESPAPSGELTDTSNRSPEPNSAQ 599
++ Q + L++ PAP T T+ + P + Q
Sbjct: 541 AQKHQQLQQMRLQQPPAPIPTTTATTQQHPRQAAPQ 576
Score = 37 (18.1 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 7/14 (50%), Positives = 8/14 (57%)
Query: 36 CGSLGRTRARKVQS 49
CGS GRT + S
Sbjct: 769 CGSSGRTAEKSAHS 782
>UNIPROTKB|J9NRN3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 EMBL:AAEX03003895
EMBL:AAEX03003896 EMBL:AAEX03003897 Ensembl:ENSCAFT00000044104
Uniprot:J9NRN3
Length = 1195
Score = 152 (58.6 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 25/51 (49%), Positives = 35/51 (68%)
Query: 713 KENDD---LCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
+E DD C +C DGG+LLCCD+CP ++H+ C++ LP IP+G W C C
Sbjct: 384 EEEDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRC 434
Score = 134 (52.2 bits), Expect = 6.0e-08, Sum P(3) = 6.0e-08
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 714 ENDDLCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
++ D C +C GG+++ CD+CPRA+H+ C+ L P G W C +C
Sbjct: 315 DHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHC 361
Score = 71 (30.1 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 19/55 (34%), Positives = 32/55 (58%)
Query: 63 KKLKTYESRKKRKRQEQSV-VVKETEDKREEEVKSDVFDVINERERPIREKESKD 116
KKLK S+ KRK++E S + E ED EE+ +S+ D +++ + K+ K+
Sbjct: 28 KKLKENRSKGKRKKKEGSNDELSENEDDLEEKSESEGSDYSPNKKKKKKLKDKKE 82
Score = 57 (25.1 bits), Expect = 6.0e-08, Sum P(3) = 6.0e-08
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 801 DTELGGCVLCRG--RDFCKSRFGRRTVILCDQCEREYHVGCL 840
+ E GGC +FC+ ++ CD C YH+ CL
Sbjct: 376 EEEEGGCEEEEDDHMEFCRVCKDGGELLCCDACPSSYHLHCL 417
Score = 51 (23.0 bits), Expect = 5.9e-06, Sum P(3) = 5.9e-06
Identities = 11/44 (25%), Positives = 23/44 (52%)
Query: 76 RQEQSVVVKETEDKREEEVKSDVFDVINERERPIREKESKDDSE 119
++++S +KE K + + K D ++E E + EK + S+
Sbjct: 23 KKKKSKKLKENRSKGKRKKKEGSNDELSENEDDLEEKSESEGSD 66
Score = 42 (19.8 bits), Expect = 4.6e-05, Sum P(3) = 4.6e-05
Identities = 8/30 (26%), Positives = 18/30 (60%)
Query: 68 YESRKKRKRQEQSVVVKETEDKREEEVKSD 97
Y KK+K++ + K+ + KR+++ + D
Sbjct: 67 YSPNKKKKKKLKDKKEKKAKRKRKDDDEDD 96
>UNIPROTKB|F1NRM1 [details] [associations]
symbol:F1NRM1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0045182 "translation regulator
activity" evidence=IEA] InterPro:IPR001965 InterPro:IPR004865
InterPro:IPR008087 InterPro:IPR019787 Pfam:PF00628 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS51414 SMART:SM00249
GO:GO:0005634 GO:GO:0005737 GO:GO:0006417 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0045182 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0006959
GeneTree:ENSGT00440000034278 EMBL:AADN02024441 EMBL:AADN02024442
IPI:IPI01017196 Ensembl:ENSGALT00000041318 ArrayExpress:F1NRM1
Uniprot:F1NRM1
Length = 537
Score = 171 (65.3 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 34/96 (35%), Positives = 52/96 (54%)
Query: 666 SEVSPSQFEAHAGWASRRKPFQHIY-TSNGVSLHELSIKLSLERPFSSKENDDLCGICMD 724
+ +S ++E GW R P ++ ++G L+ P ++N+D C +C D
Sbjct: 384 TSLSTGRWEV-TGWEVPRSPAAWLHPAADGEPLY----------PHPRQDNEDECAVCGD 432
Query: 725 GGDLLCCDSCPRAFHIDCV--SLPGIPSGTWHCRYC 758
GG+L+CCD CPRAFH+ C+ LP +P G W C C
Sbjct: 433 GGELICCDGCPRAFHLPCLVPPLPRVPRGLWLCSSC 468
Score = 151 (58.2 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 25/57 (43%), Positives = 37/57 (64%)
Query: 707 ERPFSSKENDDLCGICMDGGDLLCCDSCPRAFHIDCV--SLPGIPSGT----WHCRY 757
+ P ++N+D C +C DGG+L+CCD CPRAFH+ C+ LP +PS W+C +
Sbjct: 283 QEPALYQDNEDECAVCGDGGELICCDGCPRAFHLPCLVPPLPRVPSPATAPLWNCTH 339
Score = 52 (23.4 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 825 VILCDQCEREYHVGCL 840
+I CD C R +H+ CL
Sbjct: 436 LICCDGCPRAFHLPCL 451
Score = 42 (19.8 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 12/47 (25%), Positives = 20/47 (42%)
Query: 14 LSKIRVGLKREFEFALKVQSEICGSLGRTRARKVQSNVDSGCVLGPP 60
L + G + EF + E G+ R+R+ K S + + PP
Sbjct: 217 LGSTKAGSRARDEFCVPAAGEELGARSRSRSLKPASRPRAPQSVRPP 263
>UNIPROTKB|J3QQU3 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AC024267 HGNC:HGNC:20816
ChiTaRS:PHF12 ProteinModelPortal:J3QQU3 Ensembl:ENST00000583524
Uniprot:J3QQU3
Length = 129
Score = 142 (55.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 24/48 (50%), Positives = 28/48 (58%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLP----GIPSGTWHCRYC 758
N D C C +GGDLLCCD CP AFH+ C + P +P G W C C
Sbjct: 55 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC 102
>UNIPROTKB|F1PT90 [details] [associations]
symbol:TRIM66 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00530000062982 OMA:HMENERA EMBL:AAEX03012891
Ensembl:ENSCAFT00000011106 Uniprot:F1PT90
Length = 1374
Score = 177 (67.4 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 31/65 (47%), Positives = 42/65 (64%)
Query: 714 ENDDLCGICMDGGDLLCCDSCPRAFHIDC--VSLPGIPSGTWHCRYCMNTFQKEKFVEYN 771
EN+D C +C++GG+LLCCD CP+ FH+ C +L G P G W C C + Q E +EY+
Sbjct: 1126 ENEDFCAVCLNGGELLCCDRCPKVFHLSCHLPALLGFPGGDWVCTLCRSLTQPE--MEYD 1183
Query: 772 A-NAR 775
NAR
Sbjct: 1184 CENAR 1188
Score = 45 (20.9 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 30/133 (22%), Positives = 58/133 (43%)
Query: 276 KEYEPGRVQMEMDEEKKNDIERE-LVENGVLESSMVGKHSSTLCNGESNVAKSVAVDGND 334
KEYE +E++ ++ I RE + LE + SS GE V K + N+
Sbjct: 992 KEYENFEEALELNVKENQSIRREPKIPYVRLERLKICAASS----GEMPVFK-LKPQKNE 1046
Query: 335 EGKTVNVVVERPLRRFTRSLLQQKVELAKGSLSKD-GGKRSDVTEVAN----DGVGGPVK 389
+ + +++E + S+ + L + GG++ VT +A +G G +
Sbjct: 1047 QDGSFLLIIECGTESSSMSIKVSQNNLPDAIQAPSLGGRKVTVTSLAGQQPPEGEGASPE 1106
Query: 390 QETVMKPRKVMRK 402
++ ++ PR + K
Sbjct: 1107 EQRLI-PRTLGAK 1118
Score = 42 (19.8 bits), Expect = 2.0e-07, Sum P(3) = 2.0e-07
Identities = 9/30 (30%), Positives = 19/30 (63%)
Query: 544 VELKESQAGSAEIKEPLSHSSEMEPQPPSV 573
+E+ + A +E++EP++ S + P P+V
Sbjct: 950 LEVSKDLAIPSELEEPINLSVKKPPVVPAV 979
Score = 41 (19.5 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 14/55 (25%), Positives = 25/55 (45%)
Query: 539 LCKSCVELKESQAGSAEIKEPLSHSSEMEPQPPSVELEESPAPSGELTDTSNRSP 593
+ ++C E KE +A A I ++ + + E PAP G L +++ P
Sbjct: 137 MARNCSECKEKRA--AHIL--CTYCNRWLCSSCTEEHRHGPAPGGPLFPRAHKGP 187
Score = 38 (18.4 bits), Expect = 2.0e-07, Sum P(3) = 2.0e-07
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 360 ELAK-GSLSKDGGKRSDVTEVANDGVGGP 387
+LA G ++ +GG+ S A G+ GP
Sbjct: 394 QLASLGCITTEGGQLSRADTPAYGGLQGP 422
>RGD|1582725 [details] [associations]
symbol:Chd5 "chromodomain helicase DNA binding protein 5"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1582725 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OrthoDB:EOG4WH8JX
IPI:IPI00948282 Ensembl:ENSRNOT00000067364 UCSC:RGD:1582725
ArrayExpress:D4A5U0 Uniprot:D4A5U0
Length = 1940
Score = 152 (58.6 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 25/51 (49%), Positives = 35/51 (68%)
Query: 713 KENDD---LCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
+E DD C +C DGG+LLCCD+CP ++H+ C++ LP IP+G W C C
Sbjct: 408 EEEDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRC 458
Score = 134 (52.2 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 714 ENDDLCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
++ D C +C GG+++ CD+CPRA+H+ C+ L P G W C +C
Sbjct: 339 DHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHC 385
Score = 71 (30.1 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 19/56 (33%), Positives = 35/56 (62%)
Query: 63 KKLKTYESRKKRKRQEQSV-VVKETEDKREEEVKSDVFDV--INERERPIREKESK 115
KKLK +S+ KRK++E S + E E+ EE+ +S+ D ++++ ++EK+ K
Sbjct: 53 KKLKESKSKGKRKKKEGSNDELSENEEDLEEKSESEGSDYSPTKKKKKKLKEKKEK 108
Score = 57 (25.1 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 801 DTELGGCVLCRG--RDFCKSRFGRRTVILCDQCEREYHVGCL 840
+ E GGC +FC+ ++ CD C YH+ CL
Sbjct: 400 EEEEGGCEEEEDDHMEFCRVCKDGGELLCCDACPSSYHLHCL 441
Score = 50 (22.7 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 83 VKETEDKREEEVKSDVFDVINERERPIREKESKDDSE 119
+KE++ K + + K D ++E E + EK + S+
Sbjct: 55 LKESKSKGKRKKKEGSNDELSENEEDLEEKSESEGSD 91
Score = 50 (22.7 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 15/50 (30%), Positives = 25/50 (50%)
Query: 48 QSNVDSGCVLGPPEVKKLKTYESR-KKRKRQEQSVVVKETEDKREEEVKS 96
+ + G P + KK K E + KK KR+++ ++ ED +E KS
Sbjct: 83 EKSESEGSDYSPTKKKKKKLKEKKEKKAKRKKRDEDEEDNEDGGLKEPKS 132
Score = 41 (19.5 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 13/47 (27%), Positives = 26/47 (55%)
Query: 68 YESRKKRKRQEQSVVVKETEDKREEEVKSDVFDVINERERPIREKES 114
Y KK+K++ +KE ++K+ + K D + NE + ++E +S
Sbjct: 92 YSPTKKKKKK-----LKEKKEKKAKRKKRDEDEEDNE-DGGLKEPKS 132
Score = 39 (18.8 bits), Expect = 0.00042, Sum P(3) = 0.00042
Identities = 8/36 (22%), Positives = 21/36 (58%)
Query: 257 SDRVAMDVEEVKCEEVGLGKEYEPGRVQMEMDEEKK 292
+D ++ + E+++ + G +Y P + + + +EKK
Sbjct: 71 NDELSENEEDLEEKSESEGSDYSPTKKKKKKLKEKK 106
>DICTYBASE|DDB_G0277341 [details] [associations]
symbol:DDB_G0277341 "PHD zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 dictyBase:DDB_G0277341 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AAFI02000019 eggNOG:NOG145066
RefSeq:XP_642746.2 ProteinModelPortal:Q86K47 SMR:Q86K47
EnsemblProtists:DDB0219998 GeneID:8620936 KEGG:ddi:DDB_G0277341
InParanoid:Q86K47 OMA:ASMPSEF Uniprot:Q86K47
Length = 914
Score = 158 (60.7 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 28/54 (51%), Positives = 37/54 (68%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLP--GIPSGTWHCRYCMNTFQKEK 766
NDD C C DGGDLLCCD+C +FH+ C++ P IPSG W C C T++K++
Sbjct: 60 NDDYCSGCGDGGDLLCCDNCQASFHLICLNPPLNEIPSGDWFCDSC--TYKKQQ 111
Score = 54 (24.1 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 8/31 (25%), Positives = 16/31 (51%)
Query: 811 RGRDFCKSRFGRRTVILCDQCEREYHVGCLK 841
+G CK + ++ C++C +H CL+
Sbjct: 195 KGCQSCKDSSNQTDIVQCNRCNSCFHTFCLE 225
>UNIPROTKB|K7EQP5 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 EMBL:AC024267 HGNC:HGNC:20816
Ensembl:ENST00000583747 Uniprot:K7EQP5
Length = 117
Score = 135 (52.6 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 23/45 (51%), Positives = 27/45 (60%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLP----GIPSGTWHC 755
N D C C +GGDLLCCD CP AFH+ C + P +P G W C
Sbjct: 73 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMC 117
>UNIPROTKB|F1RGC2 [details] [associations]
symbol:TRIM66 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0016235 "aggresome" evidence=IEA]
[GO:0010369 "chromocenter" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119
SMART:SM00249 SMART:SM00297 SMART:SM00502 GO:GO:0005634
GO:GO:0045892 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0016235 Gene3D:1.20.920.10
SUPFAM:SSF47370 GO:GO:0010369 GeneTree:ENSGT00530000062982
OMA:HMENERA EMBL:FP102759 Ensembl:ENSSSCT00000015917 Uniprot:F1RGC2
Length = 1238
Score = 170 (64.9 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 31/71 (43%), Positives = 44/71 (61%)
Query: 709 PFSSKENDDLCGICMDGGDLLCCDSCPRAFHIDCVSLPGI---PSGTWHCRYCMNTFQKE 765
P + EN+D C +C++GG+LLCCD CP+ +H+ C LP + P G W C C + Q E
Sbjct: 985 PPAPVENEDFCAVCLNGGELLCCDRCPKVYHLSC-HLPALLSFPGGDWVCTLCRSLTQPE 1043
Query: 766 KFVEYNA-NAR 775
+EY+ NAR
Sbjct: 1044 --MEYDCENAR 1052
Score = 44 (20.5 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 654 KKGFGILCTCCNSEVSPSQFEAH 676
K+ ILCT CN + S E H
Sbjct: 21 KRAAHILCTYCNRWLCSSCTEEH 43
Score = 42 (19.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 16/56 (28%), Positives = 25/56 (44%)
Query: 538 LLCKSCVELKESQAGSAEIKEPLSHSSEMEPQPPSVELEESPAPSGELTDTSNRSP 593
L +SC E KE +A A I ++ + + E PAP G L + ++P
Sbjct: 10 LFFQSCSECKEKRA--AHIL--CTYCNRWLCSSCTEEHRHGPAPGGLLLPRTQKAP 61
Score = 41 (19.5 bits), Expect = 5.8e-07, Sum P(3) = 5.8e-07
Identities = 15/51 (29%), Positives = 23/51 (45%)
Query: 549 SQAGSAEIKEPLSHSSEMEPQPPSVELEESPAPSGELTDTSNRSPEPNSAQ 599
SQAG + P ++ P P + L+ +P S E +T S P S +
Sbjct: 724 SQAGPCLMSGP----AQAVPGPTACPLQTAPPASDEQPETGP-SCSPGSGR 769
Score = 40 (19.1 bits), Expect = 5.8e-07, Sum P(3) = 5.8e-07
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 360 ELAK-GSLSKDGGKRSDVTEVANDGVGGP 387
+LA G ++ DGG+ S A G GP
Sbjct: 268 QLASLGCITTDGGQLSRADPPAYGGFQGP 296
Score = 37 (18.1 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 553 SAEIKEP-LSHSSEMEPQPPSVELEESPAP 581
S ++ +P L EP+ S L + PAP
Sbjct: 388 SPKLLQPWLDTQPPAEPESGSQRLGQPPAP 417
>ZFIN|ZDB-GENE-121031-4 [details] [associations]
symbol:chd3 "chromodomain helicase DNA binding
protein 3" species:7955 "Danio rerio" [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR001965
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00628 Pfam:PF08073
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 ZFIN:ZDB-GENE-121031-4
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0016818 EMBL:BC127572
EMBL:BC127574 IPI:IPI00488488 UniGene:Dr.66871 eggNOG:NOG299768
InParanoid:A0PJQ7 OMA:DSTHEET Uniprot:A0PJQ7
Length = 430
Score = 134 (52.2 bits), Expect = 8.9e-08, Sum P(3) = 8.9e-08
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 714 ENDDLCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
++ D C +C GG+++ CD+CPRA+H+ C+ L P G W C +C
Sbjct: 381 DHQDYCEVCQQGGEIILCDTCPRAYHLVCLEPELEKAPEGKWSCPHC 427
Score = 68 (29.0 bits), Expect = 8.9e-08, Sum P(3) = 8.9e-08
Identities = 28/113 (24%), Positives = 50/113 (44%)
Query: 14 LSKIRVGLKREFEFALKVQSEICGSLGRTRARK-VQSNV--DSGCVLGPPEVKKLKTYES 70
L K + G K++ E K E G + + R RK ++S++ DS Y
Sbjct: 70 LGKKKRGPKKKKE-TKKKDKEKEGKIAKARKRKKIESDIERDSEPDYAMNSDSAASDYGG 128
Query: 71 RKKRKRQEQSVVVKETEDKREEEVKSDVFDVINERERPIREKESKDDSENMGV 123
KK+K++ + K+T+ K++E+ S E +P+ K S + G+
Sbjct: 129 EKKKKKKHKDKKEKKTKKKKKEDEDS----THEETTKPVEMKTSAQLAREWGL 177
Score = 61 (26.5 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 18/66 (27%), Positives = 35/66 (53%)
Query: 59 PPEVKKLKTYESR----KKRKRQEQSVVVKETEDKREEEVKSDVFDVINERERPIREKE- 113
PP ++K KT E + KKR + + K+ + K+ ++ + + N+R++ +E
Sbjct: 270 PPPLRKAKTKEGKGPGYKKRSKSPRVSDKKKPKPKKMAPLRIKLGAIGNKRKKSSSSEEV 329
Query: 114 SKDDSE 119
+DDSE
Sbjct: 330 DEDDSE 335
Score = 41 (19.5 bits), Expect = 8.9e-08, Sum P(3) = 8.9e-08
Identities = 15/48 (31%), Positives = 21/48 (43%)
Query: 551 AGSAEIKEPLSH---SSEMEPQPPSVELEESPAPSGELTDTSNRSPEP 595
A +A + E +S S E PQPP L ++ G+ RS P
Sbjct: 248 AAAAAVAEQVSAATASPEPPPQPPP--LRKAKTKEGKGPGYKKRSKSP 293
>ZFIN|ZDB-GENE-040724-145 [details] [associations]
symbol:trim66 "tripartite motif containing 66"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 ZFIN:ZDB-GENE-040724-145
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 GeneTree:ENSGT00530000062982 EMBL:BX323591
IPI:IPI00516161 Ensembl:ENSDART00000076510 Uniprot:F1QYE4
Length = 1119
Score = 165 (63.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 29/60 (48%), Positives = 36/60 (60%)
Query: 714 ENDDLCGICMDGGDLLCCDSCPRAFHIDCVSLP--GIPSGTWHCRYCMNTFQKEKFVEYN 771
EN+D C +C+ GGDLLCCD CP+ FH+ C P P G W C C + Q E VEY+
Sbjct: 901 ENEDFCAVCLIGGDLLCCDRCPKVFHLSCHVPPLHSFPVGDWICTLCRDVEQPE--VEYD 958
Score = 46 (21.3 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 550 QAGSAEIKEPLSHSSEMEPQP-PSVEL 575
+ GS + + HSS + PQP P + +
Sbjct: 280 EGGSRSYSDVVGHSSILRPQPVPCIAM 306
Score = 46 (21.3 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 34/130 (26%), Positives = 52/130 (40%)
Query: 468 AGS-SNKRPPEYIYLENGKTLRDIMNVCKDSPLETLEKAVRMVLGSSSMKKANFCLNCRV 526
+GS + +PP + N D ++V KD+ L+ + + S + A
Sbjct: 750 SGSLEDSQPPVQEFC-NINQESDALSVSKDAVLQPDAEEIHSDDSPSDLISAPGSDFQTE 808
Query: 527 SFSNAGVE-ELMLLCKSCVELKESQAGSAEIKEPLSHSSEMEPQPPSV-ELEESPAPSGE 584
S A VE EL + VE ES S ++ E + EME P S E+ + P E
Sbjct: 809 STREADVESELPQESELQVE-SESDVISEQLPESVLSEQEMESDPDSTAEVNLNLEPECE 867
Query: 585 LTDTSNRSPE 594
SP+
Sbjct: 868 WETEQPVSPQ 877
Score = 44 (20.5 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 12/39 (30%), Positives = 17/39 (43%)
Query: 358 KVELAKGSLSKDGGKRSDVTEVANDGVGGPVKQETVMKP 396
K+ LA G L +GG RS V + + P + P
Sbjct: 269 KIPLALGQLVVEGGSRSYSDVVGHSSILRPQPVPCIAMP 307
>UNIPROTKB|D4AB82 [details] [associations]
symbol:Trim24 "Protein Trim24" species:10116 "Rattus
norvegicus" [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 RGD:1560596
Prosite:PS00518 GO:GO:0005737 GO:GO:0045892 GO:GO:0045893
GO:GO:0008285 GO:GO:0042981 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0046777 GO:GO:0003682 GO:GO:0004672
GO:GO:0031647 GO:GO:0030163 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005719 GO:GO:0004842 GO:GO:0055074
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071391 GO:GO:0034056
GO:GO:0070562 GO:GO:0005726 OrthoDB:EOG4P8FH9 IPI:IPI00566577
Ensembl:ENSRNOT00000017848 ArrayExpress:D4AB82 Uniprot:D4AB82
Length = 1048
Score = 164 (62.8 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 27/62 (43%), Positives = 40/62 (64%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDC--VSLPGIPSGTWHCRYCMNTFQKEKFVEYNA 772
N+D C +C +GG+LLCC+ CP+ FH+ C +L PSG W C +C + + E VEY+
Sbjct: 824 NEDWCAVCQNGGELLCCEKCPKVFHLTCHVPTLTHFPSGEWICTFCRDLSKPE--VEYDC 881
Query: 773 NA 774
+A
Sbjct: 882 DA 883
Score = 53 (23.7 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 14/48 (29%), Positives = 22/48 (45%)
Query: 546 LKESQAGSAEIKEPLSHSSEMEPQPPSVELEESPAPSGELTDTSNRSP 593
L SQ+ ++E S + + P++ E SP E D S +SP
Sbjct: 764 LNSSQSSASEETVLRSDAPDSTGDQPALHHENSPNGKSEWPDASQKSP 811
Score = 50 (22.7 bits), Expect = 2.8e-07, Sum P(3) = 2.8e-07
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 569 QPPSVELEESPAPSGELTDTSNRSPEPN 596
Q PS+ L+ P P L + N SP+PN
Sbjct: 502 QQPSISLQHPP-P--RLINFQNHSPKPN 526
Score = 38 (18.4 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 327 SVAVDGNDEGKTVNVVVERPLRRFTRSLLQQKVELAKGSLSK 368
++ V+ N +GK + +E + L+QQ+ E+A LSK
Sbjct: 314 TLMVEINKKGKALLHQLESLAKDHRMKLMQQQQEVA--GLSK 353
Score = 38 (18.4 bits), Expect = 4.3e-06, Sum P(3) = 4.3e-06
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 567 EPQPPSVELEESP---APS----GELTDTSNRSP 593
+P+PPS +SP PS G +T TS P
Sbjct: 648 QPRPPSNRTVQSPNSSVPSPGLAGPVTMTSVHPP 681
Score = 37 (18.1 bits), Expect = 5.4e-06, Sum P(3) = 5.4e-06
Identities = 18/78 (23%), Positives = 31/78 (39%)
Query: 502 LEKAVRMVLGSSSMKKANFCLNCRVSFSNAGVEELMLLCKSCVELKESQAGSAEIKEPLS 561
L +R +S + +C SF + ++ L +E KESQ + +
Sbjct: 385 LRHLLRARCDASPVTNNTIQFHCDPSF---WAQNIINLGSLVIEEKESQPQMPKQNPVVE 441
Query: 562 HSSEMEPQPPSVELEESP 579
SS+ PS +L + P
Sbjct: 442 QSSQPPGGLPSNQLSKFP 459
>UNIPROTKB|K7EJ43 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AC024267 HGNC:HGNC:20816
Ensembl:ENST00000584685 Uniprot:K7EJ43
Length = 215
Score = 144 (55.7 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 26/56 (46%), Positives = 33/56 (58%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLP----GIPSGTWHCRYCMNTFQKEK 766
N D C C +GGDLLCCD CP AFH+ C + P +P G W C C T +++K
Sbjct: 79 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC--TVRRKK 132
>CGD|CAL0003038 [details] [associations]
symbol:orf19.6506 species:5476 "Candida albicans" [GO:0032221
"Rpd3S complex" evidence=IEA] [GO:0033698 "Rpd3L complex"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0060195 "negative
regulation of antisense RNA transcription" evidence=IEA]
[GO:0030174 "regulation of DNA-dependent DNA replication
initiation" evidence=IEA] [GO:0016575 "histone deacetylation"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 CGD:CAL0003038 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AACQ01000020 EMBL:AACQ01000016
eggNOG:NOG145066 RefSeq:XP_720831.1 RefSeq:XP_721344.1
RefSeq:XP_888831.1 ProteinModelPortal:Q5AH34 GeneID:3637022
GeneID:3637451 GeneID:3703842 KEGG:cal:CaO19.13859
KEGG:cal:CaO19.6506 KEGG:cal:CaO19_6506 Uniprot:Q5AH34
Length = 688
Score = 141 (54.7 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 28/82 (34%), Positives = 37/82 (45%)
Query: 691 TSNGVSLHELSIKLSLERPFSSKENDDLCGICMDGGDLLCCDSCPRAFHIDCVSLP--GI 748
TSNG + + K E KENDD C C G +CC+ CP++FH C P
Sbjct: 245 TSNGSIVKQEKDKHHEEEEEEVKENDDFCFACGMPGIFICCEKCPKSFHFTCCDPPIEEA 304
Query: 749 PSGTWHCRYCMNTFQKEKFVEY 770
P W+CR C E ++
Sbjct: 305 PEDEWYCRECYTKVHPESIQDW 326
Score = 67 (28.6 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 818 SRFGRRTVILCDQCEREYHVGCL 840
S RRT+I CD C YH+ CL
Sbjct: 418 SGLNRRTLIHCDYCPLVYHIDCL 440
Score = 41 (19.5 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 9/46 (19%), Positives = 23/46 (50%)
Query: 66 KTYESRKKRKRQEQSVVVKETEDKREEEVKSDVFDVINERERPIRE 111
KT K+ R + ++ E ++++ K + N ++RP+++
Sbjct: 181 KTSSKPKRTTRLKLTLRTPTQETGKQQQQKRSLDGSANAKQRPLKK 226
>UNIPROTKB|F1P4C7 [details] [associations]
symbol:TRIM24 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0002039 "p53 binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003713 "transcription
coactivator activity" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005719 "nuclear euchromatin"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0031647 "regulation
of protein stability" evidence=IEA] [GO:0034056 "estrogen response
element binding" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046777 "protein
autophosphorylation" evidence=IEA] [GO:0055074 "calcium ion
homeostasis" evidence=IEA] [GO:0070562 "regulation of vitamin D
receptor signaling pathway" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IEA] [GO:0071391 "cellular response
to estrogen stimulus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0016922 "ligand-dependent nuclear receptor
binding" evidence=ISS] InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 GO:GO:0005737
GO:GO:0045892 GO:GO:0045893 GO:GO:0008285 GO:GO:0042981
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0046777
GO:GO:0003682 GO:GO:0004672 GO:GO:0031647 GO:GO:0030163
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0005719
GO:GO:0004842 GO:GO:0055074 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0016922 GO:GO:0071391
GO:GO:0034056 GO:GO:0070562 GO:GO:0005726 OMA:FWAQNIF
GeneTree:ENSGT00530000062982 EMBL:AADN02006351 EMBL:AADN02006352
IPI:IPI00591737 Ensembl:ENSGALT00000020916 Uniprot:F1P4C7
Length = 928
Score = 165 (63.1 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 27/61 (44%), Positives = 39/61 (63%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDC--VSLPGIPSGTWHCRYCMNTFQKEKFVEYNA 772
N+D C +C +GG+LLCC+ CP+ FH+ C SL PSG W C +C + + E VEY+
Sbjct: 703 NEDWCAVCQNGGELLCCEKCPKVFHLSCHVPSLMSFPSGEWICTFCRDLSKPE--VEYDC 760
Query: 773 N 773
+
Sbjct: 761 D 761
Score = 43 (20.2 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 327 SVAVDGNDEGKTVNVVVERPLRRFTRSLLQQKVELAKGSLSK 368
++ V+ N +GK + +E + L+QQ++E+A LSK
Sbjct: 198 TLMVEINKKGKALLHQLETLAKEHRMKLMQQQLEVA--GLSK 237
>UNIPROTKB|B5MCJ9 [details] [associations]
symbol:TRIM66 "Tripartite motif-containing protein 66"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010369 "chromocenter" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0016235 "aggresome" evidence=IDA]
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
GO:GO:0005634 GO:GO:0045892 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0016235
Gene3D:1.20.920.10 SUPFAM:SSF47370 GO:GO:0010369 EMBL:AC091053
EMBL:AC104360 IPI:IPI00941834 HGNC:HGNC:29005 HOGENOM:HOG000074104
HOVERGEN:HBG057849 ProteinModelPortal:B5MCJ9 SMR:B5MCJ9
STRING:B5MCJ9 PRIDE:B5MCJ9 Ensembl:ENST00000402157 OMA:HMENERA
OrthoDB:EOG42V8FR ArrayExpress:B5MCJ9 Bgee:B5MCJ9 Uniprot:B5MCJ9
Length = 1245
Score = 166 (63.5 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 29/64 (45%), Positives = 40/64 (62%)
Query: 714 ENDDLCGICMDGGDLLCCDSCPRAFHIDC--VSLPGIPSGTWHCRYCMNTFQKEKFVEYN 771
EN+D C +C++GG+LLCCD CP+ FH+ C +L P G W C C + Q E +EY+
Sbjct: 997 ENEDFCAVCLNGGELLCCDRCPKVFHLSCHVPALLSFPGGEWVCTLCRSLTQPE--MEYD 1054
Query: 772 A-NA 774
NA
Sbjct: 1055 CENA 1058
Score = 45 (20.9 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 14/40 (35%), Positives = 16/40 (40%)
Query: 559 PLSHSSEMEPQPPSVELEESPAPSGELTDTSNRSPEPNSA 598
PL H P PP P PS L + + SP P A
Sbjct: 461 PLPHPPPPLPPPPQQPHPPLP-PSQHLASSQHESP-PGPA 498
>MGI|MGI:2152406 [details] [associations]
symbol:Trim66 "tripartite motif-containing 66" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010369 "chromocenter" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249
SMART:SM00297 SMART:SM00502 MGI:MGI:2152406 GO:GO:0005634
GO:GO:0045892 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076 GO:GO:0010369
EMBL:AJ307670 GeneTree:ENSGT00530000062982 CTD:9866
HOGENOM:HOG000074104 HOVERGEN:HBG057849 KO:K12032 EMBL:AY572455
EMBL:AC124457 IPI:IPI00776191 IPI:IPI00853877 RefSeq:NP_862901.3
UniGene:Mm.183528 ProteinModelPortal:Q924W6 SMR:Q924W6
STRING:Q924W6 PhosphoSite:Q924W6 PRIDE:Q924W6
Ensembl:ENSMUST00000033339 GeneID:330627 KEGG:mmu:330627
InParanoid:Q924W6 NextBio:399482 Bgee:Q924W6 CleanEx:MM_TRIM66
Genevestigator:Q924W6 Uniprot:Q924W6
Length = 1242
Score = 167 (63.8 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 29/65 (44%), Positives = 41/65 (63%)
Query: 714 ENDDLCGICMDGGDLLCCDSCPRAFHIDC--VSLPGIPSGTWHCRYCMNTFQKEKFVEYN 771
EN+D C +C++GG+LLCCD CP+ +H+ C +L P G W C C + Q E +EY+
Sbjct: 994 ENEDFCAVCINGGELLCCDRCPKVYHLSCHVPALLSFPGGEWVCTLCRSLTQPE--MEYD 1051
Query: 772 A-NAR 775
NAR
Sbjct: 1052 CENAR 1056
Score = 43 (20.2 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 566 MEPQPPSVELEESPAPSGEL 585
+EPQPP+ + S P +L
Sbjct: 389 LEPQPPAEQESTSQRPGPQL 408
Score = 39 (18.8 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 12/43 (27%), Positives = 17/43 (39%)
Query: 557 KEPLSHSSEMEPQPPSVELEESPAP-SGELTDTSNRSPEPNSA 598
++P P PP + P P S L + + SP P A
Sbjct: 453 QQPQQQPPPPPPPPPPPQHAPPPLPPSQHLASSQHESP-PGPA 494
>UNIPROTKB|E2RNG5 [details] [associations]
symbol:LOC609728 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00249 SMART:SM00297 SMART:SM00336
SMART:SM00502 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR017907 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 OMA:FWAQNIF
GeneTree:ENSGT00530000062982 EMBL:AAEX03010233
Ensembl:ENSCAFT00000006974 Uniprot:E2RNG5
Length = 1052
Score = 169 (64.5 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 36/90 (40%), Positives = 52/90 (57%)
Query: 691 TSNGVS-LHELSIKLSLERPFSSKE---NDDLCGICMDGGDLLCCDSCPRAFHIDC--VS 744
+SNG S + S K L + KE N+D C +C +GG+LLCC+ CP+ FH+ C +
Sbjct: 799 SSNGKSDWLDASQKSPLHVGETRKEDDPNEDWCAVCQNGGELLCCEKCPKVFHLSCHVPT 858
Query: 745 LPGIPSGTWHCRYCMNTFQKEKFVEYNANA 774
L PSG W C +C + + E VEY+ +A
Sbjct: 859 LANFPSGEWICTFCRDLSKPE--VEYDCDA 886
Score = 46 (21.3 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 569 QPPSVELEESPAPSGELTDTSNRSPEPN 596
Q PS+ + P P L + N SP+PN
Sbjct: 505 QQPSIS-HQQPPP--RLINFQNHSPKPN 529
Score = 38 (18.4 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 327 SVAVDGNDEGKTVNVVVERPLRRFTRSLLQQKVELAKGSLSK 368
++ V+ N +GK + +E + L+QQ+ E+A LSK
Sbjct: 317 TLMVEINKKGKALLHQLESLAKDHRMKLMQQQQEVA--GLSK 356
Score = 38 (18.4 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 567 EPQPPSVELEESP---APS----GELTDTSNRSP 593
+P+PPS +SP PS G +T TS P
Sbjct: 651 QPRPPSNRTVQSPNSSVPSPGLAGPVTMTSVHPP 684
>ZFIN|ZDB-GENE-050417-474 [details] [associations]
symbol:zgc:113411 "zgc:113411" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000770 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342
PROSITE:PS50016 PROSITE:PS50864 SMART:SM00249 SMART:SM00258
ZFIN:ZDB-GENE-050417-474 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 Gene3D:3.10.390.10 InterPro:IPR010919
SUPFAM:SSF63763 Gene3D:1.20.920.10 EMBL:BC093591 IPI:IPI00570096
UniGene:Dr.31417 ProteinModelPortal:Q566E8 HOVERGEN:HBG099637
InParanoid:Q566E8 Uniprot:Q566E8
Length = 408
Score = 153 (58.9 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 28/78 (35%), Positives = 40/78 (51%)
Query: 685 PFQHIYTSNGVSLHELSIKLSLERPFSSKENDDLCGICMDGGDLLCCDSCPRAFHIDCVS 744
P + + LH ++ + + NDD+C +C G+L+CCD CPRAFH C
Sbjct: 219 PLGRLIKKKVLELHTINCDCEICQELDQHLNDDVCFVCNSEGNLVCCDECPRAFHHHC-H 277
Query: 745 LPGIP---SGTWHCRYCM 759
LP +P SG W C C+
Sbjct: 278 LPAVPEDSSGKWSCIICV 295
Score = 43 (20.2 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 21/87 (24%), Positives = 39/87 (44%)
Query: 13 VLSKIRVGLKREFE-FALKVQSEICGSLGRTRARKVQSNVDSGCVLGPPEVKKLKTY-ES 70
+LS+ R EFE F K +++ + + +Q ++ G +L P K + + E
Sbjct: 64 ILSEDRWFTPTEFERFGRKEKNKKWRTSILCKGITLQKLIEDGFLL-PKTFMKGRIHGEK 122
Query: 71 RKKRKRQEQSVVVKETEDKREEEVKSD 97
+KKR Q V++ E + + D
Sbjct: 123 QKKRPEVLQQQVLESAEKSNGSQGEDD 149
Score = 37 (18.1 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 7/39 (17%), Positives = 21/39 (53%)
Query: 274 LGKEYEPGRVQMEMDEEKKNDIERELVENGVLESSMVGK 312
L K + GR+ E +++ ++++++E+ + G+
Sbjct: 109 LPKTFMKGRIHGEKQKKRPEVLQQQVLESAEKSNGSQGE 147
>UNIPROTKB|O15164 [details] [associations]
symbol:TRIM24 "Transcription intermediary factor 1-alpha"
species:9606 "Homo sapiens" [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0005719 "nuclear euchromatin" evidence=IEA]
[GO:0005726 "perichromatin fibrils" evidence=IEA] [GO:0008285
"negative regulation of cell proliferation" evidence=IEA]
[GO:0016922 "ligand-dependent nuclear receptor binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046777 "protein
autophosphorylation" evidence=IEA] [GO:0055074 "calcium ion
homeostasis" evidence=IEA] [GO:0070562 "regulation of vitamin D
receptor signaling pathway" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0003713 "transcription coactivator activity"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0071391 "cellular response to estrogen stimulus" evidence=IDA]
[GO:0034056 "estrogen response element binding" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IDA] [GO:0035064
"methylated histone residue binding" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0002039 "p53 binding"
evidence=IPI] [GO:0042981 "regulation of apoptotic process"
evidence=IMP] [GO:0031647 "regulation of protein stability"
evidence=IMP] [GO:0030163 "protein catabolic process" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005102
"receptor binding" evidence=TAS] [GO:0006366 "transcription from
RNA polymerase II promoter" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005829 GO:GO:0005634 Reactome:REACT_116125 GO:GO:0045892
GO:GO:0045893 GO:GO:0008285 GO:GO:0042981 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0005102 GO:GO:0046777
GO:GO:0003682 GO:GO:0004672 GO:GO:0031647 GO:GO:0003713
GO:GO:0006366 GO:GO:0030163 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005719 GO:GO:0004842 EMBL:CH236950
EMBL:CH471070 GO:GO:0055074 InterPro:IPR017907 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076 GO:GO:0070577
InterPro:IPR018359 GO:GO:0071391 MIM:188550 Orphanet:146
GO:GO:0034056 PDB:3O34 PDB:3O35 PDB:3O37 PDBsum:3O34 PDBsum:3O35
PDBsum:3O37 PDB:3O36 PDBsum:3O36 GO:GO:0070562 GO:GO:0005726
EMBL:AC013429 EMBL:AF009353 EMBL:AF119042 EMBL:AK075306
EMBL:AC008265 EMBL:BC028689 IPI:IPI00005184 IPI:IPI00184317
RefSeq:NP_003843.3 RefSeq:NP_056989.2 UniGene:Hs.490287 PDB:2YYN
PDB:3O33 PDBsum:2YYN PDBsum:3O33 ProteinModelPortal:O15164
SMR:O15164 DIP:DIP-52713N IntAct:O15164 STRING:O15164
PhosphoSite:O15164 PaxDb:O15164 PRIDE:O15164 DNASU:8805
Ensembl:ENST00000343526 Ensembl:ENST00000415680 GeneID:8805
KEGG:hsa:8805 UCSC:uc003vub.3 UCSC:uc003vuc.3 CTD:8805
GeneCards:GC07P138144 HGNC:HGNC:11812 HPA:HPA043495 MIM:603406
neXtProt:NX_O15164 PharmGKB:PA36519 HOGENOM:HOG000252971
HOVERGEN:HBG054599 InParanoid:O15164 KO:K08881 OMA:FWAQNIF
OrthoDB:EOG4P8FH9 PhylomeDB:O15164 ChiTaRS:TRIM24
EvolutionaryTrace:O15164 GenomeRNAi:8805 NextBio:33028
ArrayExpress:O15164 Bgee:O15164 CleanEx:HS_TRIM24
Genevestigator:O15164 GermOnline:ENSG00000122779 Uniprot:O15164
Length = 1050
Score = 167 (63.8 bits), Expect = 3.4e-07, Sum P(3) = 3.4e-07
Identities = 27/62 (43%), Positives = 40/62 (64%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDC--VSLPGIPSGTWHCRYCMNTFQKEKFVEYNA 772
N+D C +C +GG+LLCC+ CP+ FH+ C +L PSG W C +C + + E VEY+
Sbjct: 825 NEDWCAVCQNGGELLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFCRDLSKPE--VEYDC 882
Query: 773 NA 774
+A
Sbjct: 883 DA 884
Score = 46 (21.3 bits), Expect = 3.4e-07, Sum P(3) = 3.4e-07
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 569 QPPSVELEESPAPSGELTDTSNRSPEPN 596
Q PS+ + P P L + N SP+PN
Sbjct: 503 QQPSIS-HQQPPP--RLINFQNHSPKPN 527
Score = 41 (19.5 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 12/48 (25%), Positives = 20/48 (41%)
Query: 546 LKESQAGSAEIKEPLSHSSEMEPQPPSVELEESPAPSGELTDTSNRSP 593
L SQ+ ++E S + + P + + S E D S +SP
Sbjct: 765 LNSSQSSTSEETVLRSDAPDSTGDQPGLHQDNSSNGKSEWLDPSQKSP 812
Score = 38 (18.4 bits), Expect = 3.4e-07, Sum P(3) = 3.4e-07
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 327 SVAVDGNDEGKTVNVVVERPLRRFTRSLLQQKVELAKGSLSK 368
++ V+ N +GK + +E + L+QQ+ E+A LSK
Sbjct: 315 TLMVEINKKGKALLHQLESLAKDHRMKLMQQQQEVA--GLSK 354
Score = 38 (18.4 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 567 EPQPPSVELEESP---APS----GELTDTSNRSP 593
+P+PPS +SP PS G +T TS P
Sbjct: 649 QPRPPSNRTVQSPNSSVPSPGLAGPVTMTSVHPP 682
>RGD|1595847 [details] [associations]
symbol:Trim66 "tripartite motif-containing 66" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010369 "chromocenter" evidence=ISO] [GO:0016235
"aggresome" evidence=ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 RGD:1595847 GO:GO:0005634 GO:GO:0045892
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0016235 Gene3D:1.20.920.10 SUPFAM:SSF47370
GO:GO:0010369 GeneTree:ENSGT00530000062982 IPI:IPI00366002
PRIDE:F1M6Z0 Ensembl:ENSRNOT00000019368 UCSC:RGD:1595847
NextBio:676966 ArrayExpress:F1M6Z0 Uniprot:F1M6Z0
Length = 1307
Score = 167 (63.8 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 29/65 (44%), Positives = 41/65 (63%)
Query: 714 ENDDLCGICMDGGDLLCCDSCPRAFHIDC--VSLPGIPSGTWHCRYCMNTFQKEKFVEYN 771
EN+D C +C++GG+LLCCD CP+ +H+ C +L P G W C C + Q E +EY+
Sbjct: 1059 ENEDFCAVCINGGELLCCDRCPKVYHLSCHVPALLSFPGGEWVCTLCRSLTQPE--MEYD 1116
Query: 772 A-NAR 775
NAR
Sbjct: 1117 CENAR 1121
Score = 41 (19.5 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 566 MEPQPPSVELEESPAPSGEL 585
+EPQPP+ + S P +L
Sbjct: 453 LEPQPPAEQEGTSQRPGQQL 472
Score = 38 (18.4 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 9/37 (24%), Positives = 18/37 (48%)
Query: 554 AEIKEPLSHSSEMEPQPPSVELEESPAPSGELTDTSN 590
+E++EP++ S + P + +P S L + N
Sbjct: 890 SELEEPINLSVKKPLLAPVISTAAAPQQSRNLKEYEN 926
>UNIPROTKB|H7C2H0 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR000953 InterPro:IPR001965
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00628 Pfam:PF08073
PROSITE:PS50013 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
SMART:SM00298 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR023780 HGNC:HGNC:1918 ChiTaRS:CHD3 EMBL:AC104581
GO:GO:0016818 Ensembl:ENST00000452447 Uniprot:H7C2H0
Length = 525
Score = 145 (56.1 bits), Expect = 3.6e-06, Sum P(3) = 3.6e-06
Identities = 26/57 (45%), Positives = 35/57 (61%)
Query: 707 ERPFSSKENDD---LCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
E +E DD C +C DGG+LLCCD+C ++HI C++ LP IP+G W C C
Sbjct: 315 EEEGEKEEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRC 371
Score = 141 (54.7 bits), Expect = 3.7e-07, Sum P(4) = 3.7e-07
Identities = 27/86 (31%), Positives = 41/86 (47%)
Query: 714 ENDDLCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC----MNTFQKEKF 767
++ D C +C GG+++ CD+CPRA+H+ C+ L P G W C +C + KE+
Sbjct: 248 DHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQWEAKEEE 307
Query: 768 VEYNANARAAGRIEGVDPFAQMVSRC 793
EY G E D + C
Sbjct: 308 EEYEEEGEEEGEKEEEDDHMEYCRVC 333
Score = 52 (23.4 bits), Expect = 3.7e-07, Sum P(4) = 3.7e-07
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 814 DFCKSRFGRRTVILCDQCEREYHVGCL 840
++C+ ++ CD C YH+ CL
Sbjct: 328 EYCRVCKDGGELLCCDACISSYHIHCL 354
Score = 45 (20.9 bits), Expect = 3.7e-07, Sum P(4) = 3.7e-07
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 563 SSEMEPQPPSVELEESPAPSGELTDTSNRSPEP 595
SS+ P+P E EES SG + S R P
Sbjct: 183 SSDEGPEP---EAEESDLDSGSVHSASGRPDGP 212
Score = 44 (20.5 bits), Expect = 7.7e-07, Sum P(3) = 7.7e-07
Identities = 21/65 (32%), Positives = 27/65 (41%)
Query: 48 QSNVDSGCVL-------GPPEVKKLKTYE-SRKKRKRQEQSVVVKETEDKREEEVKSDVF 99
+S++DSG V GP KKLK RKK+K V E E E D
Sbjct: 194 ESDLDSGSVHSASGRPDGPVRTKKLKRGRPGRKKKKVLGCPAVAGEEEVDGYETDHQDYC 253
Query: 100 DVINE 104
+V +
Sbjct: 254 EVCQQ 258
Score = 40 (19.1 bits), Expect = 3.7e-07, Sum P(4) = 3.7e-07
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 59 PPEVKKLKTYESRKK-RKRQEQSVVVKETEDK 89
PP +++ KT E + KR+ +S V + K
Sbjct: 127 PPPIRRAKTKEGKGPGHKRRSKSPRVPDGRKK 158
>UNIPROTKB|F1LPP8 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR000953 InterPro:IPR001965
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00628 Pfam:PF08073
PROSITE:PS50013 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
SMART:SM00298 Pfam:PF00385 RGD:1311923 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
GeneTree:ENSGT00560000076896 GO:GO:0016818 IPI:IPI00779114
Ensembl:ENSRNOT00000057058 ArrayExpress:F1LPP8 Uniprot:F1LPP8
Length = 710
Score = 144 (55.7 bits), Expect = 1.1e-06, Sum P(4) = 1.1e-06
Identities = 25/51 (49%), Positives = 34/51 (66%)
Query: 713 KENDD---LCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
+E DD C +C DGG+LLCCD+C ++HI C++ LP IP+G W C C
Sbjct: 463 EEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRC 513
Score = 134 (52.2 bits), Expect = 4.2e-07, Sum P(5) = 4.2e-07
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 714 ENDDLCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
++ D C +C GG+++ CD+CPRA+H+ C+ L P G W C +C
Sbjct: 391 DHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHC 437
Score = 57 (25.1 bits), Expect = 4.2e-07, Sum P(5) = 4.2e-07
Identities = 21/74 (28%), Positives = 33/74 (44%)
Query: 58 GPPEVKKLKTYESRKKRKRQEQSVVVKETEDKREE-EVKSDVFDVI--NERERPIREK-E 113
GP + K+ K + RK++K + E ++ RE+ E + +R R REK E
Sbjct: 66 GPKKQKENKPGKPRKRKKLDSEEEFGSERDEYREKSESGGSEYGTGPGRKRRRKHREKRE 125
Query: 114 SKDDSENMGVGERG 127
K G G+ G
Sbjct: 126 KKTKRRKRGEGDGG 139
Score = 52 (23.4 bits), Expect = 4.2e-07, Sum P(5) = 4.2e-07
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 814 DFCKSRFGRRTVILCDQCEREYHVGCL 840
++C+ ++ CD C YH+ CL
Sbjct: 470 EYCRVCKDGGELLCCDACISSYHIHCL 496
Score = 42 (19.8 bits), Expect = 4.2e-07, Sum P(5) = 4.2e-07
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 571 PSVELEESPAPSGELTDTSNRSPEPNSAQ 599
P E EES SG + S R P A+
Sbjct: 331 PEPEAEESDLDSGSVHSASGRPDGPVRAK 359
Score = 37 (18.1 bits), Expect = 4.2e-07, Sum P(5) = 4.2e-07
Identities = 24/107 (22%), Positives = 39/107 (36%)
Query: 477 EYIYLENGKTLRDIMN--VCKDSPLETLEKAVRMVLGSSSMKKANFCLNCRVSFSNAGVE 534
+Y L N K M + K +P + K + +LG+ K F N S A V
Sbjct: 168 DYHTLTNYKAFSQFMRPLIAKKNPKIPMSKMMT-ILGA---KWREFSANNPFKGSAAAVA 223
Query: 535 ELMLLCKSCVELKESQAGSAEIKEPLSHSSEMEPQPPSVELEESPAP 581
+ V + ++ +S ++ + P P L PAP
Sbjct: 224 AAAAAAAAAV--------AEQVSAAVSSATPIAPSGPPPALPPPPAP 262
>UNIPROTKB|F2Z2R5 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AL031847
GO:GO:0008026 InterPro:IPR023780 EMBL:AL035406 HGNC:HGNC:16816
ChiTaRS:CHD5 IPI:IPI00444866 ProteinModelPortal:F2Z2R5 SMR:F2Z2R5
Ensembl:ENST00000496404 ArrayExpress:F2Z2R5 Bgee:F2Z2R5
Uniprot:F2Z2R5
Length = 1225
Score = 152 (58.6 bits), Expect = 5.4e-07, Sum P(3) = 5.4e-07
Identities = 25/51 (49%), Positives = 35/51 (68%)
Query: 713 KENDD---LCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
+E DD C +C DGG+LLCCD+CP ++H+ C++ LP IP+G W C C
Sbjct: 410 EEEDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRC 460
Score = 134 (52.2 bits), Expect = 1.4e-06, Sum P(4) = 1.4e-06
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 714 ENDDLCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
++ D C +C GG+++ CD+CPRA+H+ C+ L P G W C +C
Sbjct: 341 DHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHC 387
Score = 63 (27.2 bits), Expect = 5.4e-07, Sum P(3) = 5.4e-07
Identities = 17/55 (30%), Positives = 32/55 (58%)
Query: 63 KKLKTYESRKKRKRQEQSV-VVKETEDKREEEVKSDVFDVINERERPIREKESKD 116
KKLK + + KRK++E S + E E+ EE+ +S+ D +++ + K+ K+
Sbjct: 54 KKLKENKCKGKRKKKEGSNDELSENEEDLEEKSESEGSDYSPNKKKKKKLKDKKE 108
Score = 57 (25.1 bits), Expect = 1.4e-06, Sum P(4) = 1.4e-06
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 801 DTELGGCVLCRG--RDFCKSRFGRRTVILCDQCEREYHVGCL 840
+ E GGC +FC+ ++ CD C YH+ CL
Sbjct: 402 EEEEGGCEEEEDDHMEFCRVCKDGGELLCCDACPSSYHLHCL 443
Score = 49 (22.3 bits), Expect = 3.1e-05, Sum P(4) = 3.1e-05
Identities = 13/50 (26%), Positives = 26/50 (52%)
Query: 70 SRKKRKRQEQSVVVKETEDKREEEVKSDVFDVINERERPIREKESKDDSE 119
S K+K+ ++ +KE + K + + K D ++E E + EK + S+
Sbjct: 46 SLPKKKKPKK---LKENKCKGKRKKKEGSNDELSENEEDLEEKSESEGSD 92
Score = 42 (19.8 bits), Expect = 0.00015, Sum P(4) = 0.00015
Identities = 8/30 (26%), Positives = 18/30 (60%)
Query: 68 YESRKKRKRQEQSVVVKETEDKREEEVKSD 97
Y KK+K++ + K+ + K+++E + D
Sbjct: 93 YSPNKKKKKKLKDKKEKKAKRKKKDEDEDD 122
Score = 38 (18.4 bits), Expect = 0.00035, Sum P(4) = 0.00035
Identities = 7/36 (19%), Positives = 21/36 (58%)
Query: 257 SDRVAMDVEEVKCEEVGLGKEYEPGRVQMEMDEEKK 292
+D ++ + E+++ + G +Y P + + + ++KK
Sbjct: 72 NDELSENEEDLEEKSESEGSDYSPNKKKKKKLKDKK 107
Score = 37 (18.1 bits), Expect = 5.4e-07, Sum P(3) = 5.4e-07
Identities = 19/52 (36%), Positives = 23/52 (44%)
Query: 424 IRGSKVK-GPGVSGLRGVVKGSGISCFCDDCKGNQVVTPAVFELHAGSSNKR 474
IR +K K G G G+R +KGS KG T + G SNKR
Sbjct: 239 IRKAKTKEGKG-PGVRKKIKGSKDG----KKKGKGKKTAGLKFRFGGISNKR 285
>UNIPROTKB|F1MP49 [details] [associations]
symbol:TRIM24 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071391 "cellular response to estrogen stimulus"
evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IEA] [GO:0070562 "regulation of vitamin D receptor
signaling pathway" evidence=IEA] [GO:0055074 "calcium ion
homeostasis" evidence=IEA] [GO:0046777 "protein
autophosphorylation" evidence=IEA] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0034056 "estrogen response element binding" evidence=IEA]
[GO:0031647 "regulation of protein stability" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005726 "perichromatin
fibrils" evidence=IEA] [GO:0005719 "nuclear euchromatin"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0002039 "p53
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0045893 GO:GO:0008285 GO:GO:0042981
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0046777
GO:GO:0003682 GO:GO:0004672 GO:GO:0031647 GO:GO:0030163
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0005719
GO:GO:0004842 GO:GO:0055074 InterPro:IPR017907 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071391
GO:GO:0034056 GO:GO:0070562 GO:GO:0005726 OMA:FWAQNIF
GeneTree:ENSGT00530000062982 EMBL:DAAA02011697 EMBL:DAAA02011696
IPI:IPI01000481 Ensembl:ENSBTAT00000003151 Uniprot:F1MP49
Length = 1053
Score = 165 (63.1 bits), Expect = 5.5e-07, Sum P(3) = 5.5e-07
Identities = 35/89 (39%), Positives = 50/89 (56%)
Query: 691 TSNGVSLH-ELSIKLSLERPFSSKE---NDDLCGICMDGGDLLCCDSCPRAFHIDC--VS 744
+SNG S + S K L KE N+D C +C +GG+LLCC+ CP+ FH+ C +
Sbjct: 800 SSNGKSEWLDASQKSPLHAGEMRKEDDPNEDWCAVCQNGGELLCCEKCPKVFHLSCHVPT 859
Query: 745 LPGIPSGTWHCRYCMNTFQKEKFVEYNAN 773
L PSG W C +C + + E VEY+ +
Sbjct: 860 LANFPSGEWICTFCRDLSKPE--VEYDCD 886
Score = 46 (21.3 bits), Expect = 5.5e-07, Sum P(3) = 5.5e-07
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 569 QPPSVELEESPAPSGELTDTSNRSPEPN 596
Q PS+ + P P L + N SP+PN
Sbjct: 503 QQPSIS-HQQPPP--RLINFQNHSPKPN 527
Score = 38 (18.4 bits), Expect = 5.5e-07, Sum P(3) = 5.5e-07
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 327 SVAVDGNDEGKTVNVVVERPLRRFTRSLLQQKVELAKGSLSK 368
++ V+ N +GK + +E + L+QQ+ E+A LSK
Sbjct: 315 TLMVEINKKGKALLHQLESLAKDHRMKLMQQQQEVA--GLSK 354
Score = 38 (18.4 bits), Expect = 3.5e-06, Sum P(3) = 3.5e-06
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 567 EPQPPSVELEESP---APS----GELTDTSNRSP 593
+P+PPS +SP PS G +T TS P
Sbjct: 652 QPRPPSNRTVQSPNSSVPSPGLAGPVTMTSVHPP 685
>UNIPROTKB|F1MD96 [details] [associations]
symbol:F1MD96 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0016235 "aggresome" evidence=IEA]
[GO:0010369 "chromocenter" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
GO:GO:0005634 GO:GO:0045892 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0016235
Gene3D:1.20.920.10 SUPFAM:SSF47370 GO:GO:0010369
GeneTree:ENSGT00530000062982 OMA:HMENERA EMBL:DAAA02040745
EMBL:DAAA02040746 IPI:IPI01003121 Ensembl:ENSBTAT00000027831
Uniprot:F1MD96
Length = 1268
Score = 172 (65.6 bits), Expect = 7.8e-07, Sum P(3) = 7.8e-07
Identities = 31/66 (46%), Positives = 42/66 (63%)
Query: 714 ENDDLCGICMDGGDLLCCDSCPRAFHIDCVSLPGI---PSGTWHCRYCMNTFQKEKFVEY 770
EN+D C +C++GG+LLCCD CP+ +H+ C LP + P G W C C + Q E VEY
Sbjct: 1020 ENEDFCAVCLNGGELLCCDRCPKVYHLSC-HLPALLSFPGGDWVCTLCRSLTQPE--VEY 1076
Query: 771 NA-NAR 775
+ NAR
Sbjct: 1077 DCENAR 1082
Score = 40 (19.1 bits), Expect = 7.8e-07, Sum P(3) = 7.8e-07
Identities = 12/48 (25%), Positives = 19/48 (39%)
Query: 554 AEIKEPLSHSSEMEPQPPSVELEESPAP---SGELTDTSNRSPEPNSA 598
+ + P + P PP ++ P P S L + + SP P A
Sbjct: 469 SHFQPPPQQQLPLPPPPPPPPQQQPPLPLPPSQHLASSQHESP-PGPA 515
Score = 38 (18.4 bits), Expect = 7.8e-07, Sum P(3) = 7.8e-07
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 360 ELAK-GSLSKDGGKRSDVTEVANDGVGGP 387
+LA G ++ +GG+ S A G+ GP
Sbjct: 280 QLASLGCITTEGGQLSRADTPAYGGLQGP 308
Score = 38 (18.4 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 568 PQP-PSVELEESPAPSGELTDTSNRSPEPNSAQT 600
PQ PS+ + SPA + +D S P S T
Sbjct: 730 PQSMPSLMSDPSPAIASLASDHSQAGPNLMSGPT 763
>UNIPROTKB|O15016 [details] [associations]
symbol:TRIM66 "Tripartite motif-containing protein 66"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0016235 "aggresome" evidence=IDA]
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119
SMART:SM00249 SMART:SM00297 SMART:SM00502 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0016235 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 EMBL:AJ400879 EMBL:AC091053
EMBL:AB002296 EMBL:AC104360 IPI:IPI00004420 IPI:IPI00941834
RefSeq:NP_055633.1 UniGene:Hs.130836 ProteinModelPortal:O15016
SMR:O15016 STRING:O15016 PhosphoSite:O15016 PaxDb:O15016
PRIDE:O15016 Ensembl:ENST00000299550 GeneID:9866 KEGG:hsa:9866
UCSC:uc010rbo.2 CTD:9866 GeneCards:GC11M008595 H-InvDB:HIX0201585
HGNC:HGNC:29005 HPA:HPA027420 MIM:612000 neXtProt:NX_O15016
PharmGKB:PA134954583 HOGENOM:HOG000074104 HOVERGEN:HBG057849
KO:K12032 GenomeRNAi:9866 NextBio:37189 ArrayExpress:O15016
Bgee:O15016 CleanEx:HS_TRIM66 Genevestigator:O15016
GermOnline:ENSG00000166436 Uniprot:O15016
Length = 1216
Score = 166 (63.5 bits), Expect = 9.0e-07, Sum P(3) = 9.0e-07
Identities = 29/64 (45%), Positives = 40/64 (62%)
Query: 714 ENDDLCGICMDGGDLLCCDSCPRAFHIDC--VSLPGIPSGTWHCRYCMNTFQKEKFVEYN 771
EN+D C +C++GG+LLCCD CP+ FH+ C +L P G W C C + Q E +EY+
Sbjct: 968 ENEDFCAVCLNGGELLCCDRCPKVFHLSCHVPALLSFPGGEWVCTLCRSLTQPE--MEYD 1025
Query: 772 A-NA 774
NA
Sbjct: 1026 CENA 1029
Score = 45 (20.9 bits), Expect = 9.0e-07, Sum P(3) = 9.0e-07
Identities = 14/40 (35%), Positives = 16/40 (40%)
Query: 559 PLSHSSEMEPQPPSVELEESPAPSGELTDTSNRSPEPNSA 598
PL H P PP P PS L + + SP P A
Sbjct: 463 PLPHPPPPLPPPPQQPHPPLP-PSQHLASSQHESP-PGPA 500
Score = 38 (18.4 bits), Expect = 9.0e-07, Sum P(3) = 9.0e-07
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 537 MLLCKSCVELKESQAGSAEIKEPLSH 562
ML C SC+ ++ + ++E L +
Sbjct: 82 MLTCHSCLVVEHKEHRCRHVEEVLQN 107
>SGD|S000004680 [details] [associations]
symbol:RCO1 "Essential subunit of the histone deacetylase
Rpd3S complex" species:4932 "Saccharomyces cerevisiae" [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0060195 "negative regulation of
antisense RNA transcription" evidence=IMP] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0033698 "Rpd3L complex" evidence=IDA] [GO:0016575
"histone deacetylation" evidence=IMP] [GO:0032221 "Rpd3S complex"
evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0030174 "regulation of DNA-dependent DNA
replication initiation" evidence=IMP] [GO:0006368 "transcription
elongation from RNA polymerase II promoter" evidence=IGI]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
SGD:S000004680 GO:GO:0046872 GO:GO:0008270 EMBL:Z48952
EMBL:BK006946 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006368 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0033698 GO:GO:0016575 GO:GO:0030174
GO:GO:0032221 GO:GO:0060195 eggNOG:NOG145066
GeneTree:ENSGT00440000033777 PIR:S52835 RefSeq:NP_013791.1
ProteinModelPortal:Q04779 SMR:Q04779 DIP:DIP-1959N IntAct:Q04779
MINT:MINT-497703 STRING:Q04779 PaxDb:Q04779 PeptideAtlas:Q04779
EnsemblFungi:YMR075W GeneID:855097 KEGG:sce:YMR075W CYGD:YMR075w
HOGENOM:HOG000066043 OMA:FLCCDTC OrthoDB:EOG4TQQJV NextBio:978414
Genevestigator:Q04779 GermOnline:YMR075W Uniprot:Q04779
Length = 684
Score = 146 (56.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 714 ENDDLCGICMDGGDLLCCDSCPRAFHIDCVSLP----GIPSGTWHCRYC 758
EN+D C C G LCCD+CP++FH C+ P +P G WHC C
Sbjct: 258 ENEDFCSACNQSGSFLCCDTCPKSFHFLCLDPPIDPNNLPKGDWHCNEC 306
Score = 51 (23.0 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 7/26 (26%), Positives = 15/26 (57%)
Query: 823 RTVILCDQCEREYHVGCLKDHGMEDL 848
R ++ CD C+ +H+ C+ ++L
Sbjct: 435 RLIMTCDYCQTPWHLDCVPRASFKNL 460
>FB|FBgn0023395 [details] [associations]
symbol:Chd3 "Chd3" species:7227 "Drosophila melanogaster"
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS;NAS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0004386 "helicase
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 EMBL:AE014296 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0006333
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 PROSITE:PS00598 GeneTree:ENSGT00560000076896
InterPro:IPR009463 Pfam:PF06465 EMBL:AY071503 EMBL:AF007780
RefSeq:NP_649111.1 ProteinModelPortal:O16102 SMR:O16102
DIP:DIP-21327N MINT:MINT-1651376 STRING:O16102 PaxDb:O16102
EnsemblMetazoa:FBtr0074998 GeneID:40111 KEGG:dme:Dmel_CG9594
UCSC:CG9594-RA CTD:1107 FlyBase:FBgn0023395 InParanoid:O16102
OMA:IKWRDLA OrthoDB:EOG4JH9WN PhylomeDB:O16102 GenomeRNAi:40111
NextBio:817050 Bgee:O16102 GermOnline:CG9594 Uniprot:O16102
Length = 892
Score = 150 (57.9 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 24/47 (51%), Positives = 31/47 (65%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLP--GIPSGTWHCRYCM 759
+++ C +C DGGDLLCCDSCP +H C+S P IP G W C C+
Sbjct: 34 DEEYCKVCSDGGDLLCCDSCPSVYHRTCLSPPLKSIPKGDWICPRCI 80
>ZFIN|ZDB-GENE-030131-3876 [details] [associations]
symbol:phf12a "PHD finger protein 12a"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000253 InterPro:IPR001965 InterPro:IPR008984
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016
SMART:SM00249 ZFIN:ZDB-GENE-030131-3876 GO:GO:0046872 GO:GO:0008270
Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GeneTree:ENSGT00440000033777
EMBL:CU694807 IPI:IPI00897047 RefSeq:XP_001919955.3
UniGene:Dr.79049 Ensembl:ENSDART00000111104 GeneID:562152
KEGG:dre:562152 CTD:562152 NextBio:20884273 Uniprot:E7EXI6
Length = 941
Score = 156 (60.0 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 28/56 (50%), Positives = 35/56 (62%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLP----GIPSGTWHCRYCMNTFQKEK 766
N D+C C +GGDLLCCD CP AFH+ C + P +PSG W C C T +K+K
Sbjct: 55 NHDICDSCREGGDLLCCDHCPAAFHLQCCNPPLSREMLPSGDWMCHRC--TVRKKK 108
Score = 44 (20.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 17/48 (35%), Positives = 21/48 (43%)
Query: 797 VQTPDTELGGCVLCR-GRDFCK--SRFGRRT-VILCDQCEREYHVGCL 840
V+ P EL C L C SR R +I CD C +H+ CL
Sbjct: 265 VKRPQHELDSCGLVPLPVKVCYTCSRSCRLAPLIQCDFCPLLFHMDCL 312
Score = 38 (18.4 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 12/56 (21%), Positives = 23/56 (41%)
Query: 790 VSRCIRIVQT-PDTELGGCVLCRGRDFCKSRFGRRTVILCDQCEREYHVGCLKDHG 844
V+ C R + ++ C+ G C G+ I D+ ++Y + +HG
Sbjct: 739 VNMCYRSLHIGTGADMDVCLTNYGH--CNYVSGKHACIFYDENTKQYELLNYSEHG 792
>UNIPROTKB|E2R1M3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:AAEX03003895 EMBL:AAEX03003896 EMBL:AAEX03003897
Ensembl:ENSCAFT00000031086 Uniprot:E2R1M3
Length = 1812
Score = 152 (58.6 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 25/51 (49%), Positives = 35/51 (68%)
Query: 713 KENDD---LCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
+E DD C +C DGG+LLCCD+CP ++H+ C++ LP IP+G W C C
Sbjct: 273 EEEDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRC 323
Score = 134 (52.2 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 714 ENDDLCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
++ D C +C GG+++ CD+CPRA+H+ C+ L P G W C +C
Sbjct: 204 DHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHC 250
Score = 57 (25.1 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 801 DTELGGCVLCRG--RDFCKSRFGRRTVILCDQCEREYHVGCL 840
+ E GGC +FC+ ++ CD C YH+ CL
Sbjct: 265 EEEEGGCEEEEDDHMEFCRVCKDGGELLCCDACPSSYHLHCL 306
>UNIPROTKB|H0Y9U6 [details] [associations]
symbol:WHSC1 "Histone-lysine N-methyltransferase NSD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 Pfam:PF00855 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR000313
PROSITE:PS50812 SMART:SM00293 EMBL:AL132868 EMBL:AC105448
HGNC:HGNC:12766 ChiTaRS:WHSC1 Ensembl:ENST00000514329
Uniprot:H0Y9U6
Length = 284
Score = 140 (54.3 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 22/44 (50%), Positives = 29/44 (65%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYC 758
N C +C GG LLCC+SCP AFH DC+++ +P G+W C C
Sbjct: 154 NVSWCFVCSKGGSLLCCESCPAAFHPDCLNIE-MPDGSWFCNDC 196
>ZFIN|ZDB-GENE-041111-187 [details] [associations]
symbol:chd4a "chromodomain helicase DNA binding
protein 4a" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-041111-187
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX004850
IPI:IPI00962864 Ensembl:ENSDART00000005453 ArrayExpress:F1QWV5
Bgee:F1QWV5 Uniprot:F1QWV5
Length = 1930
Score = 156 (60.0 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 28/60 (46%), Positives = 39/60 (65%)
Query: 712 SKEND---DLCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYCMNTFQKEK 766
++E+D + C +C DGG+LLCCDSCP ++HI C++ LP IP+G W C C K K
Sbjct: 423 AEEDDHHMEFCRVCKDGGELLCCDSCPSSYHIHCLNPPLPEIPNGEWICPRCTCPSMKGK 482
Score = 137 (53.3 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 714 ENDDLCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
++ D C +C GG+++ CD+CPRA+H+ C+ + P GTW C +C
Sbjct: 351 DHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGTWSCPHC 397
Score = 58 (25.5 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 814 DFCKSRFGRRTVILCDQCEREYHVGCL 840
+FC+ ++ CD C YH+ CL
Sbjct: 431 EFCRVCKDGGELLCCDSCPSSYHIHCL 457
Score = 49 (22.3 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 15/66 (22%), Positives = 29/66 (43%)
Query: 70 SRKKRKRQEQSVVVK-------ETEDKREEEVKSDVFDVINERERPIREKESKDDSENMG 122
S++ R R+E+ + + +D E+ +S+ D R++ R +KD N
Sbjct: 51 SKRNRSRREEIGISSPEPGEGPDLDDGEEDRSESEGSDYTPGRKKKKRASTAKDKKRNSS 110
Query: 123 VGERGA 128
ER +
Sbjct: 111 AAERNS 116
Score = 47 (21.6 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 71 RKKRKRQEQSVVVKETEDKREEEVKSDVFDVINERERPIREK-ESKDDSE 119
RKK+KR + +DK+ ++ ++R P E+ E DDSE
Sbjct: 93 RKKKKRASTA------KDKKRNSSAAERNSAASKRREPEEEEDEDDDDSE 136
Score = 47 (21.6 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 14/51 (27%), Positives = 23/51 (45%)
Query: 70 SRKKRKRQEQSVVVKETEDKREEEVKSDVFDVINERERPIREKESKDDSEN 120
S R E V++E +D EE ++D V +++ +ESK N
Sbjct: 4 SEDDRDDFEHRSVMQEEDDLEEELSENDAPKVKKKKKAKKSSRESKGSKRN 54
Score = 41 (19.5 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 15/63 (23%), Positives = 31/63 (49%)
Query: 62 VKKLKTYESR----KKRKRQEQSVVVKETEDKREEEVKSDVFDVINERERPIREKESKD- 116
V+K KT E + +K+ + K+ + K+ +K + ++R+R E++ D
Sbjct: 245 VRKAKTKEGKGPNARKKSKPAPKPQEKKVKTKKVAPLKIKLGGFNSKRKRSSSEEDDVDV 304
Query: 117 DSE 119
DS+
Sbjct: 305 DSD 307
Score = 40 (19.1 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 60 PEVKKLKTYESRKKRKRQEQSVVVKETEDKREE-EVKSDVFD 100
P KK K + K +KR + KR E E + D D
Sbjct: 91 PGRKKKKRASTAKDKKRNSSAAERNSAASKRREPEEEEDEDD 132
Score = 39 (18.8 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 60 PEVKKLKTYESRKKRKRQEQSVVVKETEDKREE 92
P+VKK K K +K +S K +REE
Sbjct: 33 PKVKKKK-----KAKKSSRESKGSKRNRSRREE 60
>UNIPROTKB|Q12873 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0004386 "helicase activity" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0008270
"zinc ion binding" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007051 "spindle organization" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0051297 "centrosome organization" evidence=IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=TAS] [GO:0016581 "NuRD complex" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IDA] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
EMBL:CH471108 GO:GO:0005730 GO:GO:0051297 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006357 GO:GO:0006351
GO:GO:0016568 Gene3D:1.10.30.10 GO:GO:0045111 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004003
InterPro:IPR019786 PROSITE:PS01359
Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0007051 GO:GO:0016581 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 HOGENOM:HOG000231124
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1107 EMBL:U91543 EMBL:AF006515 EMBL:U08379 IPI:IPI00373870
IPI:IPI00411592 RefSeq:NP_001005271.2 RefSeq:NP_001005273.1
RefSeq:NP_005843.2 UniGene:Hs.25601 ProteinModelPortal:Q12873
SMR:Q12873 DIP:DIP-32496N IntAct:Q12873 MINT:MINT-1185641
STRING:Q12873 PhosphoSite:Q12873 DMDM:88911273 PaxDb:Q12873
PRIDE:Q12873 Ensembl:ENST00000330494 Ensembl:ENST00000358181
GeneID:1107 KEGG:hsa:1107 UCSC:uc002gje.2 UCSC:uc002gjf.2
GeneCards:GC17P007788 H-InvDB:HIX0013516 HGNC:HGNC:1918
HPA:HPA043368 MIM:602120 neXtProt:NX_Q12873 PharmGKB:PA26454
HOVERGEN:HBG005326 KO:K11642 PhylomeDB:Q12873 ChiTaRS:CHD3
GenomeRNAi:1107 NextBio:4590 ArrayExpress:Q12873 Bgee:Q12873
CleanEx:HS_CHD3 Genevestigator:Q12873 GermOnline:ENSG00000170004
Uniprot:Q12873
Length = 2000
Score = 145 (56.1 bits), Expect = 4.5e-06, Sum P(3) = 4.5e-06
Identities = 26/57 (45%), Positives = 35/57 (61%)
Query: 707 ERPFSSKENDD---LCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
E +E DD C +C DGG+LLCCD+C ++HI C++ LP IP+G W C C
Sbjct: 444 EEEGEKEEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRC 500
Score = 141 (54.7 bits), Expect = 2.1e-06, Sum P(4) = 2.1e-06
Identities = 27/86 (31%), Positives = 41/86 (47%)
Query: 714 ENDDLCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC----MNTFQKEKF 767
++ D C +C GG+++ CD+CPRA+H+ C+ L P G W C +C + KE+
Sbjct: 377 DHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQWEAKEEE 436
Query: 768 VEYNANARAAGRIEGVDPFAQMVSRC 793
EY G E D + C
Sbjct: 437 EEYEEEGEEEGEKEEEDDHMEYCRVC 462
Score = 64 (27.6 bits), Expect = 2.1e-06, Sum P(4) = 2.1e-06
Identities = 22/74 (29%), Positives = 34/74 (45%)
Query: 58 GPPEVKKLKTYESRKKRKRQEQSVVVKETEDKREE-EVKSDVFDVI--NERERPIREK-E 113
GP + K+ K + RK++KR + E ++ RE+ E + +R R REK E
Sbjct: 53 GPKKQKENKPGKPRKRKKRDSEEEFGSERDEYREKSESGGSEYGTGPGRKRRRKHREKKE 112
Query: 114 SKDDSENMGVGERG 127
K G G+ G
Sbjct: 113 KKTKRRKKGEGDGG 126
Score = 52 (23.4 bits), Expect = 2.1e-06, Sum P(4) = 2.1e-06
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 814 DFCKSRFGRRTVILCDQCEREYHVGCL 840
++C+ ++ CD C YH+ CL
Sbjct: 457 EYCRVCKDGGELLCCDACISSYHIHCL 483
Score = 44 (20.5 bits), Expect = 8.9e-05, Sum P(3) = 8.9e-05
Identities = 21/65 (32%), Positives = 27/65 (41%)
Query: 48 QSNVDSGCVL-------GPPEVKKLKTYE-SRKKRKRQEQSVVVKETEDKREEEVKSDVF 99
+S++DSG V GP KKLK RKK+K V E E E D
Sbjct: 323 ESDLDSGSVHSASGRPDGPVRTKKLKRGRPGRKKKKVLGCPAVAGEEEVDGYETDHQDYC 382
Query: 100 DVINE 104
+V +
Sbjct: 383 EVCQQ 387
Score = 41 (19.5 bits), Expect = 2.1e-06, Sum P(4) = 2.1e-06
Identities = 10/25 (40%), Positives = 11/25 (44%)
Query: 571 PSVELEESPAPSGELTDTSNRSPEP 595
P E EES SG + S R P
Sbjct: 317 PEPEAEESDLDSGSVHSASGRPDGP 341
Score = 40 (19.1 bits), Expect = 0.00041, Sum P(4) = 0.00041
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 59 PPEVKKLKTYESRKK-RKRQEQSVVVKETEDK 89
PP +++ KT E + KR+ +S V + K
Sbjct: 252 PPPIRRAKTKEGKGPGHKRRSKSPRVPDGRKK 283
Score = 40 (19.1 bits), Expect = 0.00041, Sum P(4) = 0.00041
Identities = 16/64 (25%), Positives = 28/64 (43%)
Query: 61 EVKKLKTYESRKKRKRQEQSVVVKETEDKREEEVKSDVFDVINERERPIREKESKDDSEN 120
+++ L + KKRKR + + R+ + + + +ER+ REK SE
Sbjct: 37 DIRLLPSALGVKKRKRGPKKQKENKPGKPRKRKKRDSEEEFGSERDE-YREKSESGGSE- 94
Query: 121 MGVG 124
G G
Sbjct: 95 YGTG 98
>MGI|MGI:109275 [details] [associations]
symbol:Trim24 "tripartite motif-containing 24" species:10090
"Mus musculus" [GO:0002039 "p53 binding" evidence=ISO;IPI]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=ISO;IDA] [GO:0003713 "transcription coactivator
activity" evidence=ISO;IDA] [GO:0004672 "protein kinase activity"
evidence=IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005719 "nuclear euchromatin" evidence=IDA]
[GO:0005726 "perichromatin fibrils" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=ISO] [GO:0008285 "negative
regulation of cell proliferation" evidence=IGI;IMP] [GO:0010628
"positive regulation of gene expression" evidence=IGI;IMP]
[GO:0016567 "protein ubiquitination" evidence=ISO;IDA] [GO:0016874
"ligase activity" evidence=IEA] [GO:0016922 "ligand-dependent
nuclear receptor binding" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=ISO;IMP] [GO:0031647 "regulation of
protein stability" evidence=ISO;IMP] [GO:0034056 "estrogen response
element binding" evidence=ISO] [GO:0042981 "regulation of apoptotic
process" evidence=ISO;IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IGI]
[GO:0046777 "protein autophosphorylation" evidence=IDA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0055074 "calcium ion
homeostasis" evidence=IMP] [GO:0070562 "regulation of vitamin D
receptor signaling pathway" evidence=IMP] [GO:0070577 "histone
acetyl-lysine binding" evidence=ISO] [GO:0071391 "cellular response
to estrogen stimulus" evidence=ISO] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 UniPathway:UPA00143
MGI:MGI:109275 Prosite:PS00518 GO:GO:0005737 GO:GO:0045892
GO:GO:0045893 GO:GO:0008285 GO:GO:0042981 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0046777 GO:GO:0006351
GO:GO:0003682 GO:GO:0004672 GO:GO:0031647 GO:GO:0003713
GO:GO:0030163 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005719 GO:GO:0004842 GO:GO:0055074
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 GO:GO:0070577 InterPro:IPR018359
GO:GO:0016922 GO:GO:0071391 GO:GO:0034056 GO:GO:0070562
GO:GO:0005726 CTD:8805 HOGENOM:HOG000252971 HOVERGEN:HBG054599
KO:K08881 OMA:FWAQNIF OrthoDB:EOG4P8FH9 ChiTaRS:TRIM24 EMBL:S78221
EMBL:S78219 EMBL:BC056959 IPI:IPI00131130 IPI:IPI00227778
PIR:S55259 RefSeq:NP_001258993.1 RefSeq:NP_659542.3
UniGene:Mm.41063 ProteinModelPortal:Q64127 SMR:Q64127
DIP:DIP-31476N IntAct:Q64127 STRING:Q64127 PhosphoSite:Q64127
PaxDb:Q64127 PRIDE:Q64127 Ensembl:ENSMUST00000031859
Ensembl:ENSMUST00000120428 GeneID:21848 KEGG:mmu:21848
UCSC:uc009bjk.1 UCSC:uc009bjl.1 GeneTree:ENSGT00530000062982
InParanoid:Q64127 NextBio:301326 Bgee:Q64127 CleanEx:MM_TRIM24
Genevestigator:Q64127 GermOnline:ENSMUSG00000029833 Uniprot:Q64127
Length = 1051
Score = 160 (61.4 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 33/89 (37%), Positives = 51/89 (57%)
Query: 691 TSNGVS-LHELSIKLSLERPFSSKE---NDDLCGICMDGGDLLCCDSCPRAFHIDC--VS 744
+SNG S + S K + + KE N+D C +C +GG+LLCC+ CP+ FH+ C +
Sbjct: 798 SSNGKSEWSDASQKSPVHVGETRKEDDPNEDWCAVCQNGGELLCCEKCPKVFHLTCHVPT 857
Query: 745 LPGIPSGTWHCRYCMNTFQKEKFVEYNAN 773
L PSG W C +C + + E V+Y+ +
Sbjct: 858 LTNFPSGEWICTFCRDLSKPE--VDYDCD 884
Score = 45 (20.9 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 569 QPPSVELEESPAPSGELTDTSNRSPEPN 596
Q PS+ + P P L + N SP+PN
Sbjct: 503 QQPSIS-HQHPPP--RLINFQNHSPKPN 527
Score = 38 (18.4 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 327 SVAVDGNDEGKTVNVVVERPLRRFTRSLLQQKVELAKGSLSK 368
++ V+ N +GK + +E + L+QQ+ E+A LSK
Sbjct: 315 TLMVEINKKGKALLHQLESLAKDHRMKLMQQQQEVA--GLSK 354
Score = 38 (18.4 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 567 EPQPPSVELEESP---APS----GELTDTSNRSP 593
+P+PPS +SP PS G +T TS P
Sbjct: 650 QPRPPSNRTVQSPNSSVPSPGLAGPVTMTSVHPP 683
Score = 38 (18.4 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 18/78 (23%), Positives = 31/78 (39%)
Query: 502 LEKAVRMVLGSSSMKKANFCLNCRVSFSNAGVEELMLLCKSCVELKESQAGSAEIKEPLS 561
L +R +S + +C SF + ++ L +E KESQ + +
Sbjct: 386 LRHLLRARCDASPVTNTTIQFHCDPSF---WAQNIINLGSLVIEDKESQPQMPKQNPVVE 442
Query: 562 HSSEMEPQPPSVELEESP 579
SS+ PS +L + P
Sbjct: 443 QSSQPPGGLPSNQLSKFP 460
>UNIPROTKB|E9PG89 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0006333 "chromatin assembly or
disassembly" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IDA] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005730 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 GO:GO:0045111
GO:GO:0006333 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1107 RefSeq:NP_001005271.2 UniGene:Hs.25601 GeneID:1107
KEGG:hsa:1107 HGNC:HGNC:1918 KO:K11642 ChiTaRS:CHD3 GenomeRNAi:1107
NextBio:4590 EMBL:AC104581 IPI:IPI00465222
ProteinModelPortal:E9PG89 SMR:E9PG89 PRIDE:E9PG89
Ensembl:ENST00000380358 UCSC:uc002gjd.2 OMA:EPEPGYR
ArrayExpress:E9PG89 Bgee:E9PG89 Uniprot:E9PG89
Length = 2059
Score = 145 (56.1 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 26/57 (45%), Positives = 35/57 (61%)
Query: 707 ERPFSSKENDD---LCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
E +E DD C +C DGG+LLCCD+C ++HI C++ LP IP+G W C C
Sbjct: 503 EEEGEKEEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRC 559
Score = 141 (54.7 bits), Expect = 2.3e-06, Sum P(4) = 2.3e-06
Identities = 27/86 (31%), Positives = 41/86 (47%)
Query: 714 ENDDLCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC----MNTFQKEKF 767
++ D C +C GG+++ CD+CPRA+H+ C+ L P G W C +C + KE+
Sbjct: 436 DHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQWEAKEEE 495
Query: 768 VEYNANARAAGRIEGVDPFAQMVSRC 793
EY G E D + C
Sbjct: 496 EEYEEEGEEEGEKEEEDDHMEYCRVC 521
Score = 64 (27.6 bits), Expect = 2.3e-06, Sum P(4) = 2.3e-06
Identities = 22/74 (29%), Positives = 34/74 (45%)
Query: 58 GPPEVKKLKTYESRKKRKRQEQSVVVKETEDKREE-EVKSDVFDVI--NERERPIREK-E 113
GP + K+ K + RK++KR + E ++ RE+ E + +R R REK E
Sbjct: 112 GPKKQKENKPGKPRKRKKRDSEEEFGSERDEYREKSESGGSEYGTGPGRKRRRKHREKKE 171
Query: 114 SKDDSENMGVGERG 127
K G G+ G
Sbjct: 172 KKTKRRKKGEGDGG 185
Score = 56 (24.8 bits), Expect = 1.4e-05, Sum P(4) = 1.4e-05
Identities = 16/56 (28%), Positives = 29/56 (51%)
Query: 72 KKRKRQEQSVVVKETEDKREEEVKSDVFDVINERERPIREKESKDDSENMGVGERG 127
+ + +E+ +VV E E++ EEE + + + + E + +DD E GV RG
Sbjct: 6 RDEEEEEEEMVVSEEEEEEEEEGDEEEEEEVEAAD----EDDEEDDDE--GVLGRG 55
Score = 52 (23.4 bits), Expect = 2.3e-06, Sum P(4) = 2.3e-06
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 814 DFCKSRFGRRTVILCDQCEREYHVGCL 840
++C+ ++ CD C YH+ CL
Sbjct: 516 EYCRVCKDGGELLCCDACISSYHIHCL 542
Score = 44 (20.5 bits), Expect = 9.7e-05, Sum P(3) = 9.7e-05
Identities = 21/65 (32%), Positives = 27/65 (41%)
Query: 48 QSNVDSGCVL-------GPPEVKKLKTYE-SRKKRKRQEQSVVVKETEDKREEEVKSDVF 99
+S++DSG V GP KKLK RKK+K V E E E D
Sbjct: 382 ESDLDSGSVHSASGRPDGPVRTKKLKRGRPGRKKKKVLGCPAVAGEEEVDGYETDHQDYC 441
Query: 100 DVINE 104
+V +
Sbjct: 442 EVCQQ 446
Score = 42 (19.8 bits), Expect = 0.00030, Sum P(4) = 0.00030
Identities = 18/69 (26%), Positives = 29/69 (42%)
Query: 59 PPEVKKLKTYESR---KKRKRQEQSVVVKETEDKREEEVKSDVFDVINERERPIREKESK 115
PP+ ++ S KKRKR + + R+ + + + +ER+ REK
Sbjct: 91 PPDKDDIRLLPSALGVKKRKRGPKKQKENKPGKPRKRKKRDSEEEFGSERDE-YREKSES 149
Query: 116 DDSENMGVG 124
SE G G
Sbjct: 150 GGSE-YGTG 157
Score = 41 (19.5 bits), Expect = 2.3e-06, Sum P(4) = 2.3e-06
Identities = 10/25 (40%), Positives = 11/25 (44%)
Query: 571 PSVELEESPAPSGELTDTSNRSPEP 595
P E EES SG + S R P
Sbjct: 376 PEPEAEESDLDSGSVHSASGRPDGP 400
Score = 40 (19.1 bits), Expect = 0.00047, Sum P(4) = 0.00047
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 59 PPEVKKLKTYESRKK-RKRQEQSVVVKETEDK 89
PP +++ KT E + KR+ +S V + K
Sbjct: 311 PPPIRRAKTKEGKGPGHKRRSKSPRVPDGRKK 342
Score = 37 (18.1 bits), Expect = 0.00089, Sum P(4) = 0.00089
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 213 VLTNVEENEHSEVDREKAE 231
V++ EE E E D E+ E
Sbjct: 16 VVSEEEEEEEEEGDEEEEE 34
>UNIPROTKB|Q5TH12 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 GO:GO:0046872 GO:GO:0008270
GO:GO:0016301 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:AL049540
EMBL:AL031666 UniGene:Hs.446240 UniGene:Hs.658553 UniGene:Hs.668465
HGNC:HGNC:9397 EMBL:AL390212 IPI:IPI00872983 SMR:Q5TH12
STRING:Q5TH12 Ensembl:ENST00000435836 HOVERGEN:HBG105145
Uniprot:Q5TH12
Length = 175
Score = 126 (49.4 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 27/89 (30%), Positives = 42/89 (47%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYCMNTFQKEKFVEYNANA 774
ND C +C G +LCC+ CPR +H C+ L P G W C C E +E + A
Sbjct: 62 NDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPECEKITVAE-CIETQSKA 120
Query: 775 RAAGRIEGVDPFAQMVSRCIRIVQTPDTE 803
IE + + ++ I+ ++ P T+
Sbjct: 121 MTMLTIEQL---SYLLKFAIQKMKQPGTD 146
>UNIPROTKB|Q8TDI0 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
EMBL:AF425231 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AL031847
GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598
HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 OrthoDB:EOG4WH8JX
EMBL:AL035406 EMBL:AL117491 EMBL:AB007913 IPI:IPI00152535
PIR:T17269 RefSeq:NP_056372.1 UniGene:Hs.522898
ProteinModelPortal:Q8TDI0 SMR:Q8TDI0 IntAct:Q8TDI0 STRING:Q8TDI0
PhosphoSite:Q8TDI0 DMDM:51701343 PaxDb:Q8TDI0 PRIDE:Q8TDI0
DNASU:26038 Ensembl:ENST00000262450 GeneID:26038 KEGG:hsa:26038
UCSC:uc001amb.2 CTD:26038 GeneCards:GC01M006096 HGNC:HGNC:16816
HPA:HPA015809 MIM:610771 neXtProt:NX_Q8TDI0 PharmGKB:PA134969178
InParanoid:Q8TDI0 KO:K14435 OMA:KRIDDGD PhylomeDB:Q8TDI0
ChiTaRS:CHD5 GenomeRNAi:26038 NextBio:47863 ArrayExpress:Q8TDI0
Bgee:Q8TDI0 CleanEx:HS_CHD5 Genevestigator:Q8TDI0
GermOnline:ENSG00000116254 Uniprot:Q8TDI0
Length = 1954
Score = 152 (58.6 bits), Expect = 2.5e-06, Sum P(3) = 2.5e-06
Identities = 25/51 (49%), Positives = 35/51 (68%)
Query: 713 KENDD---LCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
+E DD C +C DGG+LLCCD+CP ++H+ C++ LP IP+G W C C
Sbjct: 410 EEEDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRC 460
Score = 134 (52.2 bits), Expect = 9.7e-06, Sum P(4) = 9.7e-06
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 714 ENDDLCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
++ D C +C GG+++ CD+CPRA+H+ C+ L P G W C +C
Sbjct: 341 DHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHC 387
Score = 63 (27.2 bits), Expect = 2.5e-06, Sum P(3) = 2.5e-06
Identities = 17/55 (30%), Positives = 32/55 (58%)
Query: 63 KKLKTYESRKKRKRQEQSV-VVKETEDKREEEVKSDVFDVINERERPIREKESKD 116
KKLK + + KRK++E S + E E+ EE+ +S+ D +++ + K+ K+
Sbjct: 54 KKLKENKCKGKRKKKEGSNDELSENEEDLEEKSESEGSDYSPNKKKKKKLKDKKE 108
Score = 57 (25.1 bits), Expect = 9.7e-06, Sum P(4) = 9.7e-06
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 801 DTELGGCVLCRG--RDFCKSRFGRRTVILCDQCEREYHVGCL 840
+ E GGC +FC+ ++ CD C YH+ CL
Sbjct: 402 EEEEGGCEEEEDDHMEFCRVCKDGGELLCCDACPSSYHLHCL 443
Score = 49 (22.3 bits), Expect = 0.00021, Sum P(4) = 0.00021
Identities = 13/50 (26%), Positives = 26/50 (52%)
Query: 70 SRKKRKRQEQSVVVKETEDKREEEVKSDVFDVINERERPIREKESKDDSE 119
S K+K+ ++ +KE + K + + K D ++E E + EK + S+
Sbjct: 46 SLPKKKKPKK---LKENKCKGKRKKKEGSNDELSENEEDLEEKSESEGSD 92
Score = 42 (19.8 bits), Expect = 0.00098, Sum P(4) = 0.00098
Identities = 8/30 (26%), Positives = 18/30 (60%)
Query: 68 YESRKKRKRQEQSVVVKETEDKREEEVKSD 97
Y KK+K++ + K+ + K+++E + D
Sbjct: 93 YSPNKKKKKKLKDKKEKKAKRKKKDEDEDD 122
Score = 37 (18.1 bits), Expect = 2.5e-06, Sum P(3) = 2.5e-06
Identities = 19/52 (36%), Positives = 23/52 (44%)
Query: 424 IRGSKVK-GPGVSGLRGVVKGSGISCFCDDCKGNQVVTPAVFELHAGSSNKR 474
IR +K K G G G+R +KGS KG T + G SNKR
Sbjct: 239 IRKAKTKEGKG-PGVRKKIKGSKDG----KKKGKGKKTAGLKFRFGGISNKR 285
>FB|FBgn0029861 [details] [associations]
symbol:CG3815 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0070822 "Sin3-type complex" evidence=IDA]
InterPro:IPR000253 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016 SMART:SM00249
GO:GO:0046872 EMBL:AE014298 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0070822 HSSP:Q14839
eggNOG:NOG145066 GeneTree:ENSGT00440000033777 EMBL:AY069054
RefSeq:NP_572311.1 UniGene:Dm.2312 SMR:Q9W410 IntAct:Q9W410
MINT:MINT-921456 STRING:Q9W410 EnsemblMetazoa:FBtr0070899
GeneID:31571 KEGG:dme:Dmel_CG3815 UCSC:CG3815-RA
FlyBase:FBgn0029861 InParanoid:Q9W410 OMA:SEFGTEV OrthoDB:EOG45HQC9
GenomeRNAi:31571 NextBio:774240 Uniprot:Q9W410
Length = 878
Score = 145 (56.1 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 33/82 (40%), Positives = 42/82 (51%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLP----GIPSGTWHCRYCMNTFQKEKFVEY 770
N D C C +GG+LLCCD CP +FH+ C P IPSG W C C + K +
Sbjct: 52 NHDYCDACEEGGNLLCCDRCPSSFHLQCHDPPLSEEDIPSGQWLCHSC----RMSKLSQP 107
Query: 771 NANARAAGRIEGVDPFAQMVSR 792
A++ A +E V P A SR
Sbjct: 108 PASSSKASSVERV-PSAGSGSR 128
Score = 50 (22.7 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 815 FCKSRFGRRTVILCDQCEREYHVGCL 840
+C R +I CD C +H CL
Sbjct: 261 YCTRSCKRAPLISCDYCPLYFHQDCL 286
>UNIPROTKB|Q9HB58 [details] [associations]
symbol:SP110 "Sp110 nuclear body protein" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0019048 "virus-host
interaction" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0007165 "signal transduction"
evidence=TAS] InterPro:IPR000770 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR019787
Pfam:PF01342 Pfam:PF03172 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50864 PROSITE:PS51414 SMART:SM00249 SMART:SM00258
SMART:SM00297 GO:GO:0019048 GO:GO:0005730 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 EMBL:CH471063 GO:GO:0008270
GO:GO:0006351 GO:GO:0004871 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR019786 PROSITE:PS01359 Gene3D:3.10.390.10
InterPro:IPR010919 SUPFAM:SSF63763 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 HOGENOM:HOG000089984 EMBL:AC009950
HOVERGEN:HBG006294 EMBL:L22342 EMBL:L22343 EMBL:AF280094
EMBL:AF280095 EMBL:AK026488 EMBL:BC019059 IPI:IPI00162549
IPI:IPI00220746 IPI:IPI00398959 IPI:IPI00472430 IPI:IPI00873254
IPI:IPI00913939 PIR:A49515 RefSeq:NP_001171944.1 RefSeq:NP_004500.3
RefSeq:NP_536349.2 UniGene:Hs.145150 ProteinModelPortal:Q9HB58
SMR:Q9HB58 IntAct:Q9HB58 MINT:MINT-1401836 STRING:Q9HB58
PhosphoSite:Q9HB58 DMDM:209572781 PaxDb:Q9HB58 PRIDE:Q9HB58
DNASU:3431 Ensembl:ENST00000258381 Ensembl:ENST00000258382
Ensembl:ENST00000358662 GeneID:3431 KEGG:hsa:3431 UCSC:uc002vqg.3
UCSC:uc002vqh.3 UCSC:uc010fxj.3 UCSC:uc010fxk.3 CTD:3431
GeneCards:GC02M230997 HGNC:HGNC:5401 HPA:HPA047036 MIM:235550
MIM:604457 neXtProt:NX_Q9HB58 Orphanet:79124 PharmGKB:PA35104
eggNOG:NOG306672 OMA:DGTSEMN GenomeRNAi:3431 NextBio:13528
ArrayExpress:Q9HB58 Bgee:Q9HB58 CleanEx:HS_SP110
Genevestigator:Q9HB58 GermOnline:ENSG00000135899 Uniprot:Q9HB58
Length = 689
Score = 143 (55.4 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 40/121 (33%), Positives = 58/121 (47%)
Query: 646 GEKFLVGYKKGF--GILCTCCNSE----VSPSQFEAHAGWASRRKPFQHIYTSNGVSLHE 699
GE + YKK G C +E ++P++FE G K ++ G++L E
Sbjct: 469 GEAKGILYKKKMKHGSSVKCIRNEDGTWLTPNEFEVE-GKGRNAKNWKRNIRCEGMTLGE 527
Query: 700 LSIKLSLERPFSSKENDDLCGICMDGGDLLCCDSCPRAFHIDCVSLPGIPSGT--WHCRY 757
L L+R +N D C +C GG LLCC +CPR FH DC +P + + W C +
Sbjct: 528 L-----LKR-----KNSDECEVCCQGGQLLCCGTCPRVFHEDC-HIPPVEAKRMLWSCTF 576
Query: 758 C 758
C
Sbjct: 577 C 577
Score = 49 (22.3 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 563 SSEMEPQPPSVE-LEESP-APSGELTDTSNRSPEPNSAQ 599
S + PQ E +E P +P G + + + SPEPN +
Sbjct: 225 SDNLIPQIRDKEDPQEMPHSPLGSMPEIRDNSPEPNDPE 263
Score = 48 (22.0 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 26/107 (24%), Positives = 42/107 (39%)
Query: 71 RKKRKRQEQSVVVKETEDKREEEVKSDVFDVINERERPIREKESKDDSENMGVGERGALM 130
+KK KR +Q V K+ + V++ E R R +E D + M G+R
Sbjct: 309 QKKLKRVDQ-VPQKKDDSTCNSTVETRAQKARTECARKSRSEEIIDGTSEMNEGKRSQKT 367
Query: 131 NXXXXXXXXXXXXXGN--DEFGKVVIGVEEEKKNEC--DEVLMNVEE 173
G+ E +VV V + K + EV+M V++
Sbjct: 368 PSTPRRVTQGAASPGHGIQEKLQVVDKVTQRKDDSTWNSEVMMRVQK 414
Score = 41 (19.5 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 17 IRVGLKREFEFALKVQSEICGSLGRTRARKVQS 49
I+ LKR + K C S TRA+K ++
Sbjct: 308 IQKKLKRVDQVPQKKDDSTCNSTVETRAQKART 340
>UNIPROTKB|F1NH78 [details] [associations]
symbol:F1NH78 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:AADN02040929 EMBL:AADN02040930 IPI:IPI00571784
Ensembl:ENSGALT00000023340 ArrayExpress:F1NH78 Uniprot:F1NH78
Length = 1781
Score = 153 (58.9 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 26/57 (45%), Positives = 36/57 (63%)
Query: 707 ERPFSSKENDD---LCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
E +E DD C +C DGG+LLCCD+CP ++H+ C++ LP IP+G W C C
Sbjct: 333 EEEGGEEEEDDHMEFCRVCKDGGELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRC 389
Score = 134 (52.2 bits), Expect = 6.6e-05, Sum P(3) = 6.6e-05
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 714 ENDDLCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
++ D C +C GG+++ CD+CPRA+H+ C+ L P G W C +C
Sbjct: 271 DHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHC 317
Score = 55 (24.4 bits), Expect = 6.6e-05, Sum P(3) = 6.6e-05
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 814 DFCKSRFGRRTVILCDQCEREYHVGCL 840
+FC+ ++ CD C YH+ CL
Sbjct: 346 EFCRVCKDGGELLCCDTCPSSYHLHCL 372
Score = 48 (22.0 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 9/30 (30%), Positives = 19/30 (63%)
Query: 68 YESRKKRKRQEQSVVVKETEDKREEEVKSD 97
Y KK+K++ + K+T+ K+++E + D
Sbjct: 24 YSPNKKKKKKLKEKKEKKTKRKKKDEEEDD 53
Score = 46 (21.3 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 9/36 (25%), Positives = 21/36 (58%)
Query: 257 SDRVAMDVEEVKCEEVGLGKEYEPGRVQMEMDEEKK 292
+D ++ + EE++ + G +Y P + + + +EKK
Sbjct: 3 NDEISDNDEEIEEKSESEGSDYSPNKKKKKKLKEKK 38
Score = 46 (21.3 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 15/65 (23%), Positives = 34/65 (52%)
Query: 59 PPEVKKLKTYESRK---KRKRQEQSVVVKETEDKREEEVKSDVFDVINERER-PIREKES 114
PP ++K KT E + K+K + K+ + K+ +K + ++R++ E+E
Sbjct: 166 PPVIRKAKTKEGKGPGVKKKIKSSKDGKKKGKGKKMAGLKFRFGGIPSKRKKGSSSEEEE 225
Query: 115 KDDSE 119
+++S+
Sbjct: 226 REESD 230
Score = 38 (18.4 bits), Expect = 0.00064, Sum P(3) = 0.00064
Identities = 18/75 (24%), Positives = 32/75 (42%)
Query: 58 GPPEVKKLKTYESRKKRKRQEQSVVVKETEDKREEEVKSDVFDVINERERPIREKESKDD 117
GP KK+K+ + KK+ + ++ +K + K ERE + S +
Sbjct: 179 GPGVKKKIKSSKDGKKKGKGKKMAGLKFRFGGIPSKRKKGSSSEEEEREESDFDSASINS 238
Query: 118 SE-----NMGVGERG 127
S + G+G+RG
Sbjct: 239 SSVRSECSAGLGKRG 253
>UNIPROTKB|F1NH79 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:AADN02061139 EMBL:AADN02061140 EMBL:AADN02061141
EMBL:AADN02061142 EMBL:AADN02061143 IPI:IPI00598956
Ensembl:ENSGALT00000023339 OMA:DGEHEHQ Uniprot:F1NH79
Length = 1895
Score = 153 (58.9 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 26/53 (49%), Positives = 36/53 (67%)
Query: 712 SKENDD----LCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
++E DD C +C DGG+LLCCD+CP ++HI C++ LP IP+G W C C
Sbjct: 411 AEEEDDHHMEFCRVCKDGGELLCCDACPSSYHIHCLNPPLPEIPNGEWLCPRC 463
Score = 131 (51.2 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 714 ENDDLCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
++ D C +C GG+++ CD+CPRA+H+ C+ + P G W C +C
Sbjct: 338 DHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHC 384
Score = 57 (25.1 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 814 DFCKSRFGRRTVILCDQCEREYHVGCL 840
+FC+ ++ CD C YH+ CL
Sbjct: 420 EFCRVCKDGGELLCCDACPSSYHIHCL 446
Score = 48 (22.0 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 12/44 (27%), Positives = 24/44 (54%)
Query: 58 GPPEVKKLKTYESRK-KRKRQEQSVVVKETEDKREEEVKSDVFD 100
G + KKL + +K K KR+E+ +E +D +E + + + +
Sbjct: 82 GKKKKKKLGPKKEKKSKAKRKEEEDEEEEDDDSKEPKSSTQLLE 125
Score = 46 (21.3 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 16/40 (40%), Positives = 21/40 (52%)
Query: 57 LGPPEVKKLKTYESRKKRKRQEQSVVVKETEDKREEEVKS 96
LGP + KK S+ KRK +E +E ED +E KS
Sbjct: 89 LGPKKEKK-----SKAKRKEEED----EEEEDDDSKEPKS 119
Score = 45 (20.9 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 16/62 (25%), Positives = 27/62 (43%)
Query: 61 EVKKLKTYESRKKRKRQEQSVVVKETEDKREE-EVKSDVFDVINERERPIREKES--KDD 117
E + LK + +K +K +E V K+E + + D E + E+E + D
Sbjct: 14 EAETLKIKKKKKPKKLKEPKVPKLSKRQKKESLSLLPQLGDSSGEGNEFVEEEEEVLRSD 73
Query: 118 SE 119
SE
Sbjct: 74 SE 75
Score = 38 (18.4 bits), Expect = 0.00099, Sum P(3) = 0.00099
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 68 YESRKKRKRQEQSVVVKETEDKREEE 93
Y KK+K++ K+++ KR+EE
Sbjct: 79 YTPGKKKKKKLGPKKEKKSKAKRKEE 104
>UNIPROTKB|G3N175 [details] [associations]
symbol:G3N175 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000770 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01342 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50864
SMART:SM00249 SMART:SM00297 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:3.10.390.10 InterPro:IPR010919
SUPFAM:SSF63763 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00510000046835 EMBL:DAAA02006184
Ensembl:ENSBTAT00000064013 OMA:NCKKFNK Uniprot:G3N175
Length = 258
Score = 135 (52.6 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 35/107 (32%), Positives = 50/107 (46%)
Query: 663 CCNSE----VSPSQFEAHAGWASRRKPFQHIYTSNGVSLHELSIKLSLERPFSSKEN--- 715
C SE +P +FE G R K ++ G L L K + P ++ +N
Sbjct: 16 CIQSENGDWFTPREFEIRGGHG-RSKNWKISVRCGGRPLLWLMEKRGPKSPDNTLDNLCL 74
Query: 716 --DDLCGICMDGGDLLCCDSCPRAFHIDCVSLPGIPS--GTWHCRYC 758
D+C C DGG L CCD+C R+FH DC +P + + W C +C
Sbjct: 75 GNSDVCETCRDGGKLFCCDTCSRSFHEDC-HIPPVETEKDPWSCTFC 120
>FB|FBgn0023097 [details] [associations]
symbol:bon "bonus" species:7227 "Drosophila melanogaster"
[GO:0003713 "transcription coactivator activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0007422 "peripheral
nervous system development" evidence=TAS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0006325 "chromatin organization" evidence=IMP]
[GO:0048813 "dendrite morphogenesis" evidence=IMP] [GO:0048666
"neuron development" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IMP] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 GO:GO:0005634 GO:GO:0007411
GO:GO:0046872 GO:GO:0008270 GO:GO:0007422 GO:GO:0003682
GO:GO:0048813 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0006325 Gene3D:1.20.920.10 SUPFAM:SSF47370
HSSP:Q9UIG0 FlyBase:FBgn0023097 EMBL:AF210315
ProteinModelPortal:Q9U3Y7 SMR:Q9U3Y7 STRING:Q9U3Y7 PRIDE:Q9U3Y7
InParanoid:Q9U3Y7 OrthoDB:EOG48KPS6 ArrayExpress:Q9U3Y7 Bgee:Q9U3Y7
Uniprot:Q9U3Y7
Length = 1133
Score = 148 (57.2 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 25/74 (33%), Positives = 43/74 (58%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDC--VSLPGIP--SGTWHCRYCMNTFQKEKFVEY 770
N+D C +C+DGG+L+CCD CP+ FH +C ++ +P S +W C C+N KE
Sbjct: 896 NEDWCAVCLDGGELMCCDKCPKVFHQNCHIPAISSLPDESESWQCLLCVNI--KELTKTE 953
Query: 771 NANARAAGRIEGVD 784
+ ++G + ++
Sbjct: 954 GSEKSSSGELSALE 967
Score = 47 (21.6 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 7/42 (16%), Positives = 27/42 (64%)
Query: 264 VEEVKCEEVGLGKEYEPGRVQMEMDEEKKNDIERELVENGVL 305
++++KC+ + P R+Q+++++ +D+++ + + G++
Sbjct: 403 LQKLKCQRADIPNPEIPVRIQVQLNQV--SDLQKVISQLGII 442
Score = 41 (19.5 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 29/125 (23%), Positives = 50/125 (40%)
Query: 426 GSKVKGPGVSGLRGVVKGSGI--SCFCDDCKGNQVVTPAVFELHAGSSNKRPPEYIYLEN 483
G G G+ GL G + S S C C V T + EYI ++
Sbjct: 152 GDSGDGVGLLGLTGEGQKSSAAASIQCSSCSDGAVATSWCVDCS---------EYI-CDS 201
Query: 484 GKTLRDIMNVCKDSPLETLEKAVRMVL-GSSSMKKANFC-LNCRVSFSNAGVEELMLLCK 541
+ + KD ++ ++A L G++ + K + C L+ + E+L L C+
Sbjct: 202 CVQAHQRLKITKDHTIKPKDEANNEQLAGAAGVDKLHMCQLHPQ--------EKLSLFCE 253
Query: 542 SCVEL 546
+C +L
Sbjct: 254 TCDKL 258
>FB|FBgn0262519 [details] [associations]
symbol:Mi-2 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=IDA;NAS] [GO:0005634
"nucleus" evidence=ISS;IDA;NAS] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0016581 "NuRD complex" evidence=ISS;TAS]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS;IDA] [GO:0003678 "DNA
helicase activity" evidence=ISS] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007517 "muscle
organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0031491 "nucleosome binding"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0070615
"nucleosome-dependent ATPase activity" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 EMBL:AE014296 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0000122
GO:GO:0048813 GO:GO:0007517 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005700 GO:GO:0042766 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
EMBL:AF119716 EMBL:AY113368 RefSeq:NP_001163476.1
RefSeq:NP_649154.2 UniGene:Dm.28317 ProteinModelPortal:O97159
SMR:O97159 DIP:DIP-22862N IntAct:O97159 MINT:MINT-864813
STRING:O97159 PaxDb:O97159 EnsemblMetazoa:FBtr0074919
EnsemblMetazoa:FBtr0302046 GeneID:40170 KEGG:dme:Dmel_CG8103
CTD:40170 FlyBase:FBgn0262519 InParanoid:O97159 OrthoDB:EOG4T76J4
ChiTaRS:Mi-2 GenomeRNAi:40170 NextBio:817384 Bgee:O97159
GermOnline:CG8103 Uniprot:O97159
Length = 1982
Score = 151 (58.2 bits), Expect = 6.5e-06, Sum P(3) = 6.5e-06
Identities = 24/47 (51%), Positives = 31/47 (65%)
Query: 714 ENDDLCGICMDGGDLLCCDSCPRAFHIDCVSLP--GIPSGTWHCRYC 758
E+ + C +C DGG+LLCCDSCP A+H C++ P IP G W C C
Sbjct: 435 EHQEFCRVCKDGGELLCCDSCPSAYHTFCLNPPLDTIPDGDWRCPRC 481
Score = 135 (52.6 bits), Expect = 2.9e-05, Sum P(3) = 2.9e-05
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 714 ENDDLCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
E+ D C +C GG+++ CD+CPRA+H+ C+ L P G W C +C
Sbjct: 375 EHQDYCEVCQQGGEIILCDTCPRAYHLVCLEPELDEPPEGKWSCPHC 421
Score = 58 (25.5 bits), Expect = 6.5e-06, Sum P(3) = 6.5e-06
Identities = 20/73 (27%), Positives = 31/73 (42%)
Query: 47 VQSNVDSGCVLGPPEVKKLKTYESRKKRKRQEQSVVVKETEDKREEEVKSDVFDVINERE 106
++ N D P + ++ K + RK RK +E+ K+ + K E E SD E E
Sbjct: 35 LKPNNDEDDDYDPEDSRRKKKGKKRKTRKGEEKGRKKKKRK-KNESEEDSDFVQHDEEVE 93
Query: 107 RPIREKESKDDSE 119
P K + E
Sbjct: 94 YPSTSKRGRKRKE 106
Score = 58 (25.5 bits), Expect = 3.1e-05, Sum P(4) = 3.1e-05
Identities = 22/77 (28%), Positives = 35/77 (45%)
Query: 41 RTRARKVQSNVDSGCVLGPPEVKKLKTYESRKKRKRQEQSVVVKETEDKREEEVKS--DV 98
+ + +K +S DS V EV+ T + +KRK ++Q+ KE+ V+
Sbjct: 71 KKKRKKNESEEDSDFVQHDEEVEYPSTSKRGRKRKEEKQAAKEKESASSGMPSVEDVCSA 130
Query: 99 FDVIN-ERERPIREKES 114
F V N E E E +S
Sbjct: 131 FSVCNVEIEYSEEELQS 147
Score = 54 (24.1 bits), Expect = 2.9e-05, Sum P(3) = 2.9e-05
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 813 RDFCKSRFGRRTVILCDQCEREYHVGCL 840
++FC+ ++ CD C YH CL
Sbjct: 437 QEFCRVCKDGGELLCCDSCPSAYHTFCL 464
Score = 53 (23.7 bits), Expect = 2.9e-05, Sum P(3) = 2.9e-05
Identities = 16/56 (28%), Positives = 25/56 (44%)
Query: 77 QEQSVVVKETEDKREE-----EVKSDVFDVINERERPIREKESKDDSENMGVGERG 127
Q +SV E E+ R E D+++ E E E+E K + G G++G
Sbjct: 207 QARSVTGDEPEEPRSSRSSRNEKPDDIYEEAVEEEEEEEEEEKKPRRKRSGRGKKG 262
Score = 46 (21.3 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 574 ELEESPAPSGELTDTSNRSPEPNS 597
E +E AP+ EL++ S+ +PN+
Sbjct: 16 EAQEDNAPAAELSNDSDAPLKPNN 39
Score = 43 (20.2 bits), Expect = 0.00083, Sum P(4) = 0.00083
Identities = 10/39 (25%), Positives = 21/39 (53%)
Query: 84 KETED--KREEEVKSD---VFDVINERERPIREKESKDD 117
+E +D + EEE + D ++ N+ + P++ +DD
Sbjct: 5 EENDDNFQEEEEAQEDNAPAAELSNDSDAPLKPNNDEDD 43
Score = 40 (19.1 bits), Expect = 0.00056, Sum P(3) = 0.00056
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 59 PPEVKKLKTYESRKKRKRQEQSVVVKETEDKREEEVK 95
P E + ++ + K E++V +E E++ EEE K
Sbjct: 216 PEEPRSSRSSRNEKPDDIYEEAV--EEEEEEEEEEKK 250
Score = 40 (19.1 bits), Expect = 0.00056, Sum P(3) = 0.00056
Identities = 16/54 (29%), Positives = 25/54 (46%)
Query: 64 KLKTYESRKKR---KRQEQSVVVKETEDKREEEV--KSDVFDVINERERPIREK 112
K+K RK+ + Q+ S + D E + KSD D +E+E P+ K
Sbjct: 273 KIKLLGKRKRDSSDEEQDASGASERDSDLEFERMLQKSD--DSADEKEAPVSSK 324
Score = 39 (18.8 bits), Expect = 6.5e-06, Sum P(3) = 6.5e-06
Identities = 11/27 (40%), Positives = 12/27 (44%)
Query: 275 GKEYEPGRVQMEMDEEKKNDIERELVE 301
G E E R EK +DI E VE
Sbjct: 213 GDEPEEPRSSRSSRNEKPDDIYEEAVE 239
>MGI|MGI:1344380 [details] [associations]
symbol:Chd4 "chromodomain helicase DNA binding protein 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=ISO] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016818
"hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0043234
"protein complex" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 MGI:MGI:1344380 Pfam:PF00385
GO:GO:0005524 GO:GO:0005737 GO:GO:0005813 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
GeneTree:ENSGT00560000076896 HOGENOM:HOG000231124
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
HOVERGEN:HBG005326 CTD:1108 KO:K11643 OrthoDB:EOG4WH8JX
ChiTaRS:CHD4 EMBL:BC058578 IPI:IPI00396802 RefSeq:NP_666091.1
UniGene:Mm.333388 ProteinModelPortal:Q6PDQ2 SMR:Q6PDQ2
DIP:DIP-59651N IntAct:Q6PDQ2 STRING:Q6PDQ2 PhosphoSite:Q6PDQ2
PaxDb:Q6PDQ2 PRIDE:Q6PDQ2 Ensembl:ENSMUST00000056889 GeneID:107932
KEGG:mmu:107932 UCSC:uc009dtk.1 NextBio:359735 PMAP-CutDB:Q6PDQ2
Bgee:Q6PDQ2 CleanEx:MM_CHD4 Genevestigator:Q6PDQ2
GermOnline:ENSMUSG00000063870 Uniprot:Q6PDQ2
Length = 1915
Score = 152 (58.6 bits), Expect = 7.3e-06, Sum P(3) = 7.3e-06
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 713 KENDD----LCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
+E DD C +C DGG+LLCCD+CP ++HI C++ LP IP+G W C C
Sbjct: 435 EEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRC 486
Score = 131 (51.2 bits), Expect = 5.4e-05, Sum P(4) = 5.4e-05
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 714 ENDDLCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
++ D C +C GG+++ CD+CPRA+H+ C+ + P G W C +C
Sbjct: 361 DHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHC 407
Score = 57 (25.1 bits), Expect = 5.4e-05, Sum P(4) = 5.4e-05
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 814 DFCKSRFGRRTVILCDQCEREYHVGCL 840
+FC+ ++ CD C YH+ CL
Sbjct: 443 EFCRVCKDGGELLCCDTCPSSYHIHCL 469
Score = 51 (23.0 bits), Expect = 7.3e-06, Sum P(3) = 7.3e-06
Identities = 26/76 (34%), Positives = 37/76 (48%)
Query: 21 LKREFEFALKVQSEICGSLGRTRARKVQSNVDSGCVLGPPEVKKLKTYESRKKRKRQEQS 80
++ E E AL+ SE GS T +K + LGP + KK S+ KRK +E+
Sbjct: 86 VEEEEEVALRSDSE--GS-DYTPGKKKKKK------LGPKKEKK-----SKSKRKEEEE- 130
Query: 81 VVVKETEDKREEEVKS 96
+E ED +E KS
Sbjct: 131 ---EEDEDDDSKEPKS 143
Score = 47 (21.6 bits), Expect = 0.00013, Sum P(4) = 0.00013
Identities = 12/44 (27%), Positives = 23/44 (52%)
Query: 58 GPPEVKKLKTYESRK-KRKRQEQSVVVKETEDKREEEVKSDVFD 100
G + KKL + +K K KR+E+ E +D +E + + + +
Sbjct: 106 GKKKKKKLGPKKEKKSKSKRKEEEEEEDEDDDSKEPKSSAQLLE 149
Score = 44 (20.5 bits), Expect = 7.3e-06, Sum P(3) = 7.3e-06
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 551 AGSAEIKEPLSHSSEMEPQPPSVELEESPAPSGE 584
A + + E + ++E+ P PP VE+ A + E
Sbjct: 224 AAAVAVVESMVTATEVAPPPPPVEVPIRKAKTKE 257
Score = 42 (19.8 bits), Expect = 0.00039, Sum P(4) = 0.00039
Identities = 12/50 (24%), Positives = 26/50 (52%)
Query: 68 YESRKKRKRQEQSVVVKETEDKREEEVKSDVFDVINERERPIREKESKDD 117
Y KK+K++ K+++ KR+EE + + D ++ + P + +D
Sbjct: 103 YTPGKKKKKKLGPKKEKKSKSKRKEEEEEE--DEDDDSKEPKSSAQLLED 150
Score = 41 (19.5 bits), Expect = 0.00052, Sum P(3) = 0.00052
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 63 KKLKTYESRKKRKRQEQSVVVKETEDKREE 92
KKL+T ++KK+K +E+ V E ++
Sbjct: 337 KKLRT--AKKKKKGEEEVTAVDGYETDHQD 364
Score = 41 (19.5 bits), Expect = 0.00052, Sum P(3) = 0.00052
Identities = 10/41 (24%), Positives = 18/41 (43%)
Query: 554 AEIKEPLSHSSEMEPQPPSVELEESPAPSGELTDTSNRSPE 594
+E + P + +P ++ +S EL D+S PE
Sbjct: 44 SEAETPKLKKKKKPKKPRDPKIPKSKRQKKELGDSSGEGPE 84
Score = 40 (19.1 bits), Expect = 0.00060, Sum P(4) = 0.00060
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 265 EEVKCEEVGLGKEYEPGRVQMEM---DEEKKNDIERE 298
EEV G +Y PG+ + + +EKK+ +R+
Sbjct: 90 EEVALRSDSEGSDYTPGKKKKKKLGPKKEKKSKSKRK 126
>UNIPROTKB|J9NUG7 [details] [associations]
symbol:WHSC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR009071 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50280
PROSITE:PS51215 SMART:SM00184 SMART:SM00249 SMART:SM00317
SMART:SM00570 Pfam:PF00855 Pfam:PF00505 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 EMBL:AAEX03002459
Ensembl:ENSCAFT00000043831 Uniprot:J9NUG7
Length = 1359
Score = 140 (54.3 bits), Expect = 7.7e-06, Sum P(4) = 7.7e-06
Identities = 22/44 (50%), Positives = 29/44 (65%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYC 758
N C +C GG LLCC+SCP AFH DC+++ +P G+W C C
Sbjct: 824 NVSWCFVCSKGGSLLCCESCPAAFHPDCLNID-MPDGSWFCNDC 866
Score = 51 (23.0 bits), Expect = 7.7e-06, Sum P(4) = 7.7e-06
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 825 VILCDQ--CEREYHVGCL 840
++LCD+ C + YH+ CL
Sbjct: 1245 LVLCDRKSCTKAYHLSCL 1262
Score = 49 (22.3 bits), Expect = 7.7e-06, Sum P(4) = 7.7e-06
Identities = 19/71 (26%), Positives = 27/71 (38%)
Query: 529 SNAGVEELMLLCKSCVELKESQAGSAEIKEPLSHSSEMEPQPPSVELEESPAPSGELTDT 588
S A + L CK K ++A +A P S SS P E E S P E ++
Sbjct: 578 SQAATKHLSDACKPLK--KRNRASTAASSTPFSKSSS--PSASLTENEVSDGPGDEPLES 633
Query: 589 SNRSPEPNSAQ 599
S + +
Sbjct: 634 PYESADETQTE 644
Score = 45 (20.9 bits), Expect = 7.7e-06, Sum P(4) = 7.7e-06
Identities = 33/122 (27%), Positives = 51/122 (41%)
Query: 311 GKHSSTLCNGESNVAKSVAVDGNDEGKTVNVVVERPLRRFTRSLLQQKVELAKGSLSKDG 370
G H + L ES K + N N E L+ T++ + K L + S+ DG
Sbjct: 87 GAHDAKL-RFESQEGKGLGTPPNTT-PIKNGSPEIKLK-ITKTYMNGK-PLFESSICGDG 142
Query: 371 GKRSDVTEVANDGVGGPVKQETVMKPRKVMRKFYSKLKNFLESGILEGMSVMYIRGSKVK 430
+ V++ +G Q+ K R+ RK K +FLE G++E V SK+
Sbjct: 143 A--AAVSQSEENG------QKAENKARR-SRKRSIKYDSFLEQGLVEAALV-----SKIS 188
Query: 431 GP 432
P
Sbjct: 189 SP 190
Score = 44 (20.5 bits), Expect = 9.7e-06, Sum P(4) = 9.7e-06
Identities = 14/40 (35%), Positives = 16/40 (40%)
Query: 332 GNDEGKTVNVVVERPLRRFTRSLLQQKVELAKGSLSKDGG 371
GN GKT N V R F S L +G + K G
Sbjct: 24 GNTNGKTQNCEVNRECSVFL-SKAHLSTSLQEGVMQKFNG 62
Score = 41 (19.5 bits), Expect = 1.9e-05, Sum P(4) = 1.9e-05
Identities = 14/62 (22%), Positives = 31/62 (50%)
Query: 76 RQEQSVVVKETEDKREEEVKS---DVFDVINERERP--------IREKESKDDSENMGVG 124
++ + VV E D EE++ +D++NE+++ + +S++DS N+
Sbjct: 460 QKHRDEVVAEHPDASGEEIEELLGSQWDMLNEKQKARYNTKFALVASSQSEEDSGNINGK 519
Query: 125 ER 126
+R
Sbjct: 520 KR 521
Score = 40 (19.1 bits), Expect = 2.3e-05, Sum P(4) = 2.3e-05
Identities = 9/26 (34%), Positives = 18/26 (69%)
Query: 291 KKNDIERE-LVENGVLESSMVGKHSS 315
+K I+ + +E G++E+++V K SS
Sbjct: 164 RKRSIKYDSFLEQGLVEAALVSKISS 189
Score = 40 (19.1 bits), Expect = 5.7e-05, Sum P(4) = 5.7e-05
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 548 ESQAGSAEIKE---PLSHSSEMEPQPPSVELEESPAPSGELTD 587
+SQA + + + PL + S +S +PS LT+
Sbjct: 577 KSQAATKHLSDACKPLKKRNRASTAASSTPFSKSSSPSASLTE 619
Score = 39 (18.8 bits), Expect = 7.0e-05, Sum P(4) = 7.0e-05
Identities = 14/59 (23%), Positives = 28/59 (47%)
Query: 526 VSFSNAGVEELMLLCKSCVELKESQAGSAEIKEPLSHSSEMEPQPPSVELEESPAPSGE 584
V+F G E LC+ + ++A ++ +P+S + + V+ EE+ + S E
Sbjct: 277 VAFEGEGQFEK--LCQESAKQAPTKAEKIKLLKPISGKLRAQWEMGIVQAEEAASMSIE 333
>UNIPROTKB|F1PK46 [details] [associations]
symbol:WHSC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR009071 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50280
PROSITE:PS51215 SMART:SM00184 SMART:SM00249 SMART:SM00317
SMART:SM00570 Pfam:PF00855 Pfam:PF00505 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 OMA:DVKRCVV
EMBL:AAEX03002459 Ensembl:ENSCAFT00000023738 Uniprot:F1PK46
Length = 1362
Score = 140 (54.3 bits), Expect = 7.8e-06, Sum P(4) = 7.8e-06
Identities = 22/44 (50%), Positives = 29/44 (65%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYC 758
N C +C GG LLCC+SCP AFH DC+++ +P G+W C C
Sbjct: 827 NVSWCFVCSKGGSLLCCESCPAAFHPDCLNID-MPDGSWFCNDC 869
Score = 51 (23.0 bits), Expect = 7.8e-06, Sum P(4) = 7.8e-06
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 825 VILCDQ--CEREYHVGCL 840
++LCD+ C + YH+ CL
Sbjct: 1248 LVLCDRKSCTKAYHLSCL 1265
Score = 49 (22.3 bits), Expect = 7.8e-06, Sum P(4) = 7.8e-06
Identities = 19/71 (26%), Positives = 27/71 (38%)
Query: 529 SNAGVEELMLLCKSCVELKESQAGSAEIKEPLSHSSEMEPQPPSVELEESPAPSGELTDT 588
S A + L CK K ++A +A P S SS P E E S P E ++
Sbjct: 581 SQAATKHLSDACKPLK--KRNRASTAASSTPFSKSSS--PSASLTENEVSDGPGDEPLES 636
Query: 589 SNRSPEPNSAQ 599
S + +
Sbjct: 637 PYESADETQTE 647
Score = 45 (20.9 bits), Expect = 7.8e-06, Sum P(4) = 7.8e-06
Identities = 33/122 (27%), Positives = 51/122 (41%)
Query: 311 GKHSSTLCNGESNVAKSVAVDGNDEGKTVNVVVERPLRRFTRSLLQQKVELAKGSLSKDG 370
G H + L ES K + N N E L+ T++ + K L + S+ DG
Sbjct: 87 GAHDAKL-RFESQEGKGLGTPPNTT-PIKNGSPEIKLK-ITKTYMNGK-PLFESSICGDG 142
Query: 371 GKRSDVTEVANDGVGGPVKQETVMKPRKVMRKFYSKLKNFLESGILEGMSVMYIRGSKVK 430
+ V++ +G Q+ K R+ RK K +FLE G++E V SK+
Sbjct: 143 A--AAVSQSEENG------QKAENKARR-SRKRSIKYDSFLEQGLVEAALV-----SKIS 188
Query: 431 GP 432
P
Sbjct: 189 SP 190
Score = 44 (20.5 bits), Expect = 9.7e-06, Sum P(4) = 9.7e-06
Identities = 14/40 (35%), Positives = 16/40 (40%)
Query: 332 GNDEGKTVNVVVERPLRRFTRSLLQQKVELAKGSLSKDGG 371
GN GKT N V R F S L +G + K G
Sbjct: 24 GNTNGKTQNCEVNRECSVFL-SKAHLSTSLQEGVMQKFNG 62
Score = 41 (19.5 bits), Expect = 1.9e-05, Sum P(4) = 1.9e-05
Identities = 14/62 (22%), Positives = 31/62 (50%)
Query: 76 RQEQSVVVKETEDKREEEVKS---DVFDVINERERP--------IREKESKDDSENMGVG 124
++ + VV E D EE++ +D++NE+++ + +S++DS N+
Sbjct: 463 QKHRDEVVAEHPDASGEEIEELLGSQWDMLNEKQKARYNTKFALVASSQSEEDSGNINGK 522
Query: 125 ER 126
+R
Sbjct: 523 KR 524
Score = 40 (19.1 bits), Expect = 2.4e-05, Sum P(4) = 2.4e-05
Identities = 9/26 (34%), Positives = 18/26 (69%)
Query: 291 KKNDIERE-LVENGVLESSMVGKHSS 315
+K I+ + +E G++E+++V K SS
Sbjct: 164 RKRSIKYDSFLEQGLVEAALVSKISS 189
Score = 40 (19.1 bits), Expect = 5.7e-05, Sum P(4) = 5.7e-05
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 548 ESQAGSAEIKE---PLSHSSEMEPQPPSVELEESPAPSGELTD 587
+SQA + + + PL + S +S +PS LT+
Sbjct: 580 KSQAATKHLSDACKPLKKRNRASTAASSTPFSKSSSPSASLTE 622
Score = 39 (18.8 bits), Expect = 7.1e-05, Sum P(4) = 7.1e-05
Identities = 14/59 (23%), Positives = 28/59 (47%)
Query: 526 VSFSNAGVEELMLLCKSCVELKESQAGSAEIKEPLSHSSEMEPQPPSVELEESPAPSGE 584
V+F G E LC+ + ++A ++ +P+S + + V+ EE+ + S E
Sbjct: 280 VAFEGEGQFEK--LCQESAKQAPTKAEKIKLLKPISGKLRAQWEMGIVQAEEAASMSIE 336
>ZFIN|ZDB-GENE-030131-4532 [details] [associations]
symbol:chd4b "chromodomain helicase DNA binding
protein 4b" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-030131-4532
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX511250
IPI:IPI00931161 RefSeq:XP_685699.4 UniGene:Dr.75373
Ensembl:ENSDART00000092902 Ensembl:ENSDART00000148389 GeneID:560622
KEGG:dre:560622 CTD:560622 NextBio:20883532 Uniprot:F1RBT2
Length = 1953
Score = 155 (59.6 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 27/60 (45%), Positives = 39/60 (65%)
Query: 713 KENDD----LCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYCMNTFQKEK 766
+E DD C +C DGG+LLCCD+CP ++H+ C++ LP IP+G W C C++ K K
Sbjct: 450 EEEDDHHMEFCRVCKDGGELLCCDTCPSSYHLHCLNPPLPDIPNGEWICPRCLSPPLKGK 509
Score = 152 (58.6 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 40/130 (30%), Positives = 62/130 (47%)
Query: 714 ENDDLCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYCMNTFQKEKFVEYN 771
++ D C +C GG+++ CD+CPRA+H+ C+ + P GTW C +C +KE +++
Sbjct: 373 DHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMERAPEGTWSCPHC----EKEG-IQWE 427
Query: 772 ANARAA-GRIEGVDPFAQMVSRCIRIVQTPDTELGGCVLCRGRDFCKSRFGRRTVILCDQ 830
A ++ G E D R V+ D CR CK G ++ CD
Sbjct: 428 AREESSEGEEENDDG-----RRDDGDVEEEDDH--HMEFCR---VCKDG-GE--LLCCDT 474
Query: 831 CEREYHVGCL 840
C YH+ CL
Sbjct: 475 CPSSYHLHCL 484
Score = 44 (20.5 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 11/61 (18%), Positives = 31/61 (50%)
Query: 61 EVKKLKTYESRKKRKRQEQSVVVKETEDKREEEVKSDVFDVINERERPIREKESKDDSEN 120
++ + T +S+KK+K ++ + KR++ ++ ++ E IR E +++ +
Sbjct: 21 QISETDTPKSKKKKKAKKSR---ESRTSKRQKVIREEIAVSSPEVMEAIRMAEGEEEEDR 77
Query: 121 M 121
+
Sbjct: 78 V 78
Score = 43 (20.2 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 70 SRKKRKRQEQSVVVKETEDKREEEVKSDVFDVINERERPIREKESKDDSEN 120
S+KK+KR S K+ + E K+ ++R+ P E+E DD ++
Sbjct: 91 SKKKKKRSSSS---KDRKKGSAGE-KAGGSGGKSKRKEPEPEEEDDDDDDD 137
Score = 42 (19.8 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 16/65 (24%), Positives = 28/65 (43%)
Query: 59 PPEV--KKLKTYESRKKRKRQEQSVVVKETEDKREEEVKSDVFDV-INERERPIREKESK 115
PP V +K KT E + R++ K +DK+ + K + + +R +
Sbjct: 268 PPAVPLRKAKTKEGKGPNARRKTKPTPKP-QDKKSKAKKVAPLKIKLGNFKRKRSSSGEE 326
Query: 116 DDSEN 120
DD E+
Sbjct: 327 DDGES 331
Score = 37 (18.1 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 85 ETEDKREEEVKSDVFDVINERERPIREKESKDDSENMGVGER 126
E E+ R +S+ D +++ R SKD + GE+
Sbjct: 72 EEEEDRVMRSESEGSDYAPSKKKKKRSSSSKDRKKG-SAGEK 112
>UNIPROTKB|C9J9G2 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AC024267 HGNC:HGNC:20816
HOGENOM:HOG000220810 ChiTaRS:PHF12 IPI:IPI00952567
ProteinModelPortal:C9J9G2 STRING:C9J9G2 Ensembl:ENST00000378879
UCSC:uc002hdh.1 ArrayExpress:C9J9G2 Uniprot:C9J9G2
Length = 705
Score = 144 (55.7 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 26/56 (46%), Positives = 33/56 (58%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLP----GIPSGTWHCRYCMNTFQKEK 766
N D C C +GGDLLCCD CP AFH+ C + P +P G W C C T +++K
Sbjct: 55 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC--TVRRKK 108
Score = 45 (20.9 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 825 VILCDQCEREYHVGCLK 841
+I CD C +H+ CL+
Sbjct: 286 LIQCDYCPLLFHMDCLE 302
>ZFIN|ZDB-GENE-030131-2581 [details] [associations]
symbol:whsc1 "Wolf-Hirschhorn syndrome candidate
1" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0018024 "histone-lysine N-methyltransferase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0051216 "cartilage development" evidence=IMP] [GO:0010452
"histone H3-K36 methylation" evidence=IMP] [GO:0048706 "embryonic
skeletal system development" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0032259 "methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 ZFIN:ZDB-GENE-030131-2581
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 GO:GO:0051216
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
GO:GO:0048706 SMART:SM00293 EMBL:CR556722 KO:K11424 GO:GO:0010452
CTD:7468 EMBL:CT573111 IPI:IPI00492725 RefSeq:NP_001076020.1
UniGene:Dr.78031 Ensembl:ENSDART00000009499 GeneID:100000709
KEGG:dre:100000709 HOVERGEN:HBG106834 OMA:FESECLN NextBio:20784754
Uniprot:B8JIA4
Length = 1461
Score = 143 (55.4 bits), Expect = 8.3e-06, Sum P(3) = 8.3e-06
Identities = 26/56 (46%), Positives = 35/56 (62%)
Query: 712 SKENDDLCGICMDGGDLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYCMNTFQKEKF 767
S N C IC GG LLCC+SCP AFH DC+++ +P G+W C C + +K K+
Sbjct: 919 SHVNVSWCFICSKGGRLLCCESCPAAFHPDCLNI-AMPDGSWFCNDCRSG-KKPKY 972
Score = 51 (23.0 bits), Expect = 8.3e-06, Sum P(3) = 8.3e-06
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 825 VILCDQ--CEREYHVGCL 840
++LCD+ C + YH+ CL
Sbjct: 1339 LVLCDKKGCTKAYHLSCL 1356
Score = 49 (22.3 bits), Expect = 8.3e-06, Sum P(3) = 8.3e-06
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 262 MDVEEVKCEEVGLGKEYEPGRVQMEMDEEKKNDIEREL-VENGVLES 307
+ V+ KC V LG + P R +++ EEK + + L + GVL S
Sbjct: 126 LTVKITKCV-VNLGGK--PNRYEVDYTEEKAEETDAPLRLPEGVLTS 169
Score = 41 (19.5 bits), Expect = 5.2e-05, Sum P(3) = 5.2e-05
Identities = 27/117 (23%), Positives = 48/117 (41%)
Query: 22 KREFEFALKVQSEICGSLGRTRARKVQSNVDSGCVLGPPEVKKLKTY--ESRKKRKR--Q 77
K++ K +S++ + + K S+ + + P ++ KT E+RK+ K+ +
Sbjct: 638 KQDVTLQPKKKSKLEKDFKKWKCPKAASSAPAA--VPAPRGRRRKTDRDENRKRSKKASK 695
Query: 78 EQSVVVKETEDKREEEVKSDVFDVIN--------ERERPIREKESKDDSENMGVGER 126
E+ + KR+EE F E ERP +S D+S ER
Sbjct: 696 EEPPPKAKRGRKRKEESGRQSFPASKKCRPSSYAEPERPDSPSDSTDESHPSKKAER 752
Score = 39 (18.8 bits), Expect = 8.1e-05, Sum P(3) = 8.1e-05
Identities = 9/45 (20%), Positives = 20/45 (44%)
Query: 47 VQSNVDSGCVLGPPEVKKLKTYESRKKRKRQEQSVVVKETEDKRE 91
+ S+ SG P + +K +R+K++ +V E ++
Sbjct: 472 IDSSTSSGKTALPRKARKPSVKTNRRKQRSSTIEWIVTEASSAKQ 516
>WB|WBGene00002637 [details] [associations]
symbol:let-418 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0048557 "embryonic digestive tract
morphogenesis" evidence=IGI] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0008134 "transcription
factor binding" evidence=IPI] [GO:0016581 "NuRD complex"
evidence=ISS] [GO:0040027 "negative regulation of vulval
development" evidence=IMP] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
Length = 1829
Score = 134 (52.2 bits), Expect = 9.3e-06, Sum P(3) = 9.3e-06
Identities = 24/59 (40%), Positives = 34/59 (57%)
Query: 703 KLSLERPFSSKENDDLCGICMDGGDLLCCDSCPRAFHIDCV--SLPGIPSGTWHCRYCM 759
K LE+ EN+D C C G+LL CD+CPRA+H C+ ++ P G W C +C+
Sbjct: 244 KAKLEKG-EEAENNDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHCI 301
Score = 56 (24.8 bits), Expect = 9.3e-06, Sum P(3) = 9.3e-06
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 814 DFCKSRFGRRTVILCDQCEREYHVGCL 840
+FCK ++LCD C +H C+
Sbjct: 318 EFCKICKETENLLLCDSCVCSFHAYCI 344
Score = 56 (24.8 bits), Expect = 9.3e-06, Sum P(3) = 9.3e-06
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 59 PPEVKKLKTYESRKKRKRQEQSVVVKETED--KREEEVKSD-VFDVINERERPIREKESK 115
PP KT +R+KR+ + +E E K++E+++ D V D + R + E+E K
Sbjct: 172 PPRSAPTKTRSARRKRRDSDAPDSDQEFEAFIKQQEQLEDDLVKDKEDARIKRAAEREEK 231
Score = 46 (21.3 bits), Expect = 0.00013, Sum P(4) = 0.00013
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 77 QEQSVVVKETEDKREEEVKSDVFDV-INERERPIREKESK 115
+E SV TE+ EEE + + +ER+R R+K K
Sbjct: 17 EEGSVTQDATEETEEEEEQEQGDEAGPSERKRSSRKKGGK 56
Score = 42 (19.8 bits), Expect = 0.00013, Sum P(4) = 0.00013
Identities = 14/46 (30%), Positives = 22/46 (47%)
Query: 276 KEYEPGRVQMEMDEEKKNDIERELVENGVLESSMVGKHSSTLCNGE 321
++ E V+ + D K ERE + G LE++ K + L GE
Sbjct: 207 EQLEDDLVKDKEDARIKRAAEREEKKKGALEAARAAKKAK-LEKGE 251
Score = 38 (18.4 bits), Expect = 0.00055, Sum P(3) = 0.00055
Identities = 9/40 (22%), Positives = 22/40 (55%)
Query: 353 SLLQQKVELAKGSLSKDGGKRSDVTEVANDG-VGGPVKQE 391
SL+ + + +GS+++D + ++ E G GP +++
Sbjct: 8 SLVDAEESMEEGSVTQDATEETEEEEEQEQGDEAGPSERK 47
>UNIPROTKB|G5EBZ4 [details] [associations]
symbol:let-418 "Protein let-418" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
Length = 1829
Score = 134 (52.2 bits), Expect = 9.3e-06, Sum P(3) = 9.3e-06
Identities = 24/59 (40%), Positives = 34/59 (57%)
Query: 703 KLSLERPFSSKENDDLCGICMDGGDLLCCDSCPRAFHIDCV--SLPGIPSGTWHCRYCM 759
K LE+ EN+D C C G+LL CD+CPRA+H C+ ++ P G W C +C+
Sbjct: 244 KAKLEKG-EEAENNDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHCI 301
Score = 56 (24.8 bits), Expect = 9.3e-06, Sum P(3) = 9.3e-06
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 814 DFCKSRFGRRTVILCDQCEREYHVGCL 840
+FCK ++LCD C +H C+
Sbjct: 318 EFCKICKETENLLLCDSCVCSFHAYCI 344
Score = 56 (24.8 bits), Expect = 9.3e-06, Sum P(3) = 9.3e-06
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 59 PPEVKKLKTYESRKKRKRQEQSVVVKETED--KREEEVKSD-VFDVINERERPIREKESK 115
PP KT +R+KR+ + +E E K++E+++ D V D + R + E+E K
Sbjct: 172 PPRSAPTKTRSARRKRRDSDAPDSDQEFEAFIKQQEQLEDDLVKDKEDARIKRAAEREEK 231
Score = 46 (21.3 bits), Expect = 0.00013, Sum P(4) = 0.00013
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 77 QEQSVVVKETEDKREEEVKSDVFDV-INERERPIREKESK 115
+E SV TE+ EEE + + +ER+R R+K K
Sbjct: 17 EEGSVTQDATEETEEEEEQEQGDEAGPSERKRSSRKKGGK 56
Score = 42 (19.8 bits), Expect = 0.00013, Sum P(4) = 0.00013
Identities = 14/46 (30%), Positives = 22/46 (47%)
Query: 276 KEYEPGRVQMEMDEEKKNDIERELVENGVLESSMVGKHSSTLCNGE 321
++ E V+ + D K ERE + G LE++ K + L GE
Sbjct: 207 EQLEDDLVKDKEDARIKRAAEREEKKKGALEAARAAKKAK-LEKGE 251
Score = 38 (18.4 bits), Expect = 0.00055, Sum P(3) = 0.00055
Identities = 9/40 (22%), Positives = 22/40 (55%)
Query: 353 SLLQQKVELAKGSLSKDGGKRSDVTEVANDG-VGGPVKQE 391
SL+ + + +GS+++D + ++ E G GP +++
Sbjct: 8 SLVDAEESMEEGSVTQDATEETEEEEEQEQGDEAGPSERK 47
>UNIPROTKB|G3MZ32 [details] [associations]
symbol:G3MZ32 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PROSITE:PS50014 PROSITE:PS50016
SMART:SM00249 SMART:SM00297 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 GeneTree:ENSGT00510000046835
EMBL:DAAA02006184 Ensembl:ENSBTAT00000063110 Uniprot:G3MZ32
Length = 218
Score = 130 (50.8 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 21/46 (45%), Positives = 28/46 (60%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLPGIPS--GTWHCRYC 758
N D+C C DGG L CCD+C R+FH DC +P + + W C +C
Sbjct: 36 NSDVCETCRDGGKLFCCDTCSRSFHEDC-HIPPVETEKDPWSCTFC 80
>UNIPROTKB|F1N544 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:DAAA02048806
IPI:IPI00716282 Ensembl:ENSBTAT00000019119 ArrayExpress:F1N544
Uniprot:F1N544
Length = 1998
Score = 145 (56.1 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 26/57 (45%), Positives = 35/57 (61%)
Query: 707 ERPFSSKENDD---LCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
E +E DD C +C DGG+LLCCD+C ++HI C++ LP IP+G W C C
Sbjct: 440 EEEGEKEEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRC 496
Score = 138 (53.6 bits), Expect = 1.0e-05, Sum P(4) = 1.0e-05
Identities = 26/86 (30%), Positives = 41/86 (47%)
Query: 714 ENDDLCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC----MNTFQKEKF 767
++ D C +C GG+++ CD+CPRA+H+ C+ L P G W C +C + KE+
Sbjct: 373 DHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQWEAKEEE 432
Query: 768 VEYNANARAAGRIEGVDPFAQMVSRC 793
+Y G E D + C
Sbjct: 433 EDYEEEGEEEGEKEEEDDHMEYCRVC 458
Score = 60 (26.2 bits), Expect = 1.0e-05, Sum P(4) = 1.0e-05
Identities = 22/74 (29%), Positives = 33/74 (44%)
Query: 58 GPPEVKKLKTYESRKKRKRQEQSVVVKETEDKREE-EVKSDVFDVI--NERERPIREK-E 113
GP + K+ K + RK++K + E ++ RE+ E + +R R REK E
Sbjct: 49 GPKKQKENKPGKPRKRKKLDSEEEFGSERDEYREKSESGGSEYGTGPGRKRRRKHREKKE 108
Query: 114 SKDDSENMGVGERG 127
K G GE G
Sbjct: 109 KKTKRRKKGEGEGG 122
Score = 52 (23.4 bits), Expect = 1.0e-05, Sum P(4) = 1.0e-05
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 814 DFCKSRFGRRTVILCDQCEREYHVGCL 840
++C+ ++ CD C YH+ CL
Sbjct: 453 EYCRVCKDGGELLCCDACISSYHIHCL 479
Score = 43 (20.2 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 21/65 (32%), Positives = 27/65 (41%)
Query: 48 QSNVDSGCVL-------GPPEVKKLKTYE-SRKKRKRQEQSVVVKETEDKREEEVKSDVF 99
+S++DSG V GP KKLK RKK+K V E E E D
Sbjct: 319 ESDLDSGSVHSASGRPDGPIRTKKLKRGRPGRKKKKVLGCPAVAGEEEIDGYETDHQDYC 378
Query: 100 DVINE 104
+V +
Sbjct: 379 EVCQQ 383
Score = 41 (19.5 bits), Expect = 1.0e-05, Sum P(4) = 1.0e-05
Identities = 10/25 (40%), Positives = 11/25 (44%)
Query: 571 PSVELEESPAPSGELTDTSNRSPEP 595
P E EES SG + S R P
Sbjct: 313 PEPEAEESDLDSGSVHSASGRPDGP 337
Score = 40 (19.1 bits), Expect = 0.00082, Sum P(4) = 0.00082
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 59 PPEVKKLKTYESRKK-RKRQEQSVVVKETEDK 89
PP +++ KT E + KR+ +S V + K
Sbjct: 248 PPPIRRAKTKEGKGPGHKRRSKSPRVPDGRKK 279
Score = 37 (18.1 bits), Expect = 2.5e-05, Sum P(4) = 2.5e-05
Identities = 10/40 (25%), Positives = 22/40 (55%)
Query: 271 EVGL--GKEYEPGRVQMEMDEEKKNDIERELVENGVLESS 308
++GL GK + G ++ DE + + E +++G + S+
Sbjct: 291 KLGLLGGKRKKGGSYVLQSDEGPEPEAEESDLDSGSVHSA 330
>UNIPROTKB|F1N3F6 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:ERMLLCR EMBL:DAAA02014463 IPI:IPI00877578
Ensembl:ENSBTAT00000019612 ArrayExpress:F1N3F6 Uniprot:F1N3F6
Length = 1934
Score = 152 (58.6 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 713 KENDD----LCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
+E DD C +C DGG+LLCCD+CP ++HI C++ LP IP+G W C C
Sbjct: 464 EEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRC 515
Score = 131 (51.2 bits), Expect = 8.8e-05, Sum P(4) = 8.8e-05
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 714 ENDDLCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
++ D C +C GG+++ CD+CPRA+H+ C+ + P G W C +C
Sbjct: 390 DHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHC 436
Score = 57 (25.1 bits), Expect = 8.8e-05, Sum P(4) = 8.8e-05
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 814 DFCKSRFGRRTVILCDQCEREYHVGCL 840
+FC+ ++ CD C YH+ CL
Sbjct: 472 EFCRVCKDGGELLCCDTCPSSYHIHCL 498
Score = 47 (21.6 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 12/47 (25%), Positives = 24/47 (51%)
Query: 551 AGSAEIKEPLSHSSEMEPQPPSVE--LEESPAPSG-ELTDTSNRSPE 594
A + + E + ++E+ P PP VE + ++ G +L + R P+
Sbjct: 251 AAAVAVVESMVTATEVAPPPPPVEVPIRKAKTKEGKDLGPNARRKPK 297
Score = 46 (21.3 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 68 YESRKKRKRQEQSVVVKETEDKREEEVKSDVFD 100
Y KK+K++ K+++ KR+EE + D D
Sbjct: 130 YTPGKKKKKKLGPKKEKKSKSKRKEEEEEDEDD 162
Score = 45 (20.9 bits), Expect = 0.00011, Sum P(4) = 0.00011
Identities = 11/44 (25%), Positives = 24/44 (54%)
Query: 58 GPPEVKKLKTYESRK-KRKRQEQSVVVKETEDKREEEVKSDVFD 100
G + KKL + +K K KR+E+ ++ +D +E + + + +
Sbjct: 133 GKKKKKKLGPKKEKKSKSKRKEEEEEDEDDDDSKEPKSSAQLLE 176
Score = 41 (19.5 bits), Expect = 0.00053, Sum P(3) = 0.00053
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 63 KKLKTYESRKKRKRQEQSVVVKETEDKREE 92
KKL+T ++KK+K +E+ V E ++
Sbjct: 366 KKLRT--TKKKKKGEEEVTAVDGYETDHQD 393
Score = 40 (19.1 bits), Expect = 0.00033, Sum P(4) = 0.00033
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 265 EEVKCEEVGLGKEYEPGRVQMEM---DEEKKNDIERE 298
EEV G +Y PG+ + + +EKK+ +R+
Sbjct: 117 EEVALRSDSEGSDYTPGKKKKKKLGPKKEKKSKSKRK 153
>UNIPROTKB|Q2TAK2 [details] [associations]
symbol:PHF12 "PHF12 protein" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AC024267 UniGene:Hs.444173 HGNC:HGNC:20816
HOVERGEN:HBG057884 ChiTaRS:PHF12 IPI:IPI00952567 EMBL:BC110882
ProteinModelPortal:Q2TAK2 SMR:Q2TAK2 STRING:Q2TAK2
Ensembl:ENST00000577226 UCSC:uc002hdi.1 Bgee:Q2TAK2 Uniprot:Q2TAK2
Length = 849
Score = 144 (55.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 26/56 (46%), Positives = 33/56 (58%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLP----GIPSGTWHCRYCMNTFQKEK 766
N D C C +GGDLLCCD CP AFH+ C + P +P G W C C T +++K
Sbjct: 55 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC--TVRRKK 108
Score = 45 (20.9 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 825 VILCDQCEREYHVGCLK 841
+I CD C +H+ CL+
Sbjct: 286 LIQCDYCPLLFHMDCLE 302
>UNIPROTKB|D4AC30 [details] [associations]
symbol:D4AC30 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 IPI:IPI00781625
Ensembl:ENSRNOT00000035130 ArrayExpress:D4AC30 Uniprot:D4AC30
Length = 786
Score = 143 (55.4 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 28/68 (41%), Positives = 36/68 (52%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLP----GIPSGTWHCRYCMNTFQKEKFVEY 770
N D C C +GGDLLCCD CP AFH+ C + P +P G W C C T +++
Sbjct: 55 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC--TVRRKASRTQ 112
Query: 771 NANARAAG 778
+A R G
Sbjct: 113 SAKLRWXG 120
Score = 45 (20.9 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 825 VILCDQCEREYHVGCLK 841
+I CD C +H+ CL+
Sbjct: 285 LIQCDYCPLLFHMDCLE 301
>UNIPROTKB|E2QYC0 [details] [associations]
symbol:PHF12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 OMA:MSSQAQG
GeneTree:ENSGT00440000033777 EMBL:AAEX03006672
Ensembl:ENSCAFT00000029911 Uniprot:E2QYC0
Length = 910
Score = 144 (55.7 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 26/56 (46%), Positives = 33/56 (58%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLP----GIPSGTWHCRYCMNTFQKEK 766
N D C C +GGDLLCCD CP AFH+ C + P +P G W C C T +++K
Sbjct: 55 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC--TVRRKK 108
Score = 45 (20.9 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 825 VILCDQCEREYHVGCLK 841
+I CD C +H+ CL+
Sbjct: 286 LIQCDYCPLLFHMDCLE 302
>UNIPROTKB|F1NP02 [details] [associations]
symbol:PHF21A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR017956 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02178 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 SMART:SM00384 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GeneTree:ENSGT00530000063984 EMBL:AADN02033506
EMBL:AADN02033505 IPI:IPI00680686 Ensembl:ENSGALT00000030514
ArrayExpress:F1NP02 Uniprot:F1NP02
Length = 603
Score = 137 (53.3 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 27/68 (39%), Positives = 37/68 (54%)
Query: 704 LSLERPFSSKEND---DLCGICMDGGDLLCCDSCPRAFHIDCVSLP--GIPSGTWHCRYC 758
+SL P SS + D D C +C G LL CD+C R +H+DC+ P IP G W C C
Sbjct: 398 VSLPSP-SSTDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPKC 456
Query: 759 MNTFQKEK 766
+ K++
Sbjct: 457 QDQMLKKE 464
>UNIPROTKB|E1C765 [details] [associations]
symbol:WHSC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0003149 "membranous septum
morphogenesis" evidence=IEA] [GO:0003289 "atrial septum primum
morphogenesis" evidence=IEA] [GO:0003290 "atrial septum secundum
morphogenesis" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0031965 "nuclear membrane" evidence=IEA] [GO:0060348 "bone
development" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR009071 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855 Pfam:PF00505
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0031965
GO:GO:0003682 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 OMA:DVKRCVV
EMBL:AADN02014946 IPI:IPI00588925 Ensembl:ENSGALT00000025327
Uniprot:E1C765
Length = 1372
Score = 137 (53.3 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 22/45 (48%), Positives = 31/45 (68%)
Query: 715 NDDLCGICM-DGGDLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYC 758
N C +C +GG LLCC+SCP AFH DC+++ +P G+W+C C
Sbjct: 835 NVSWCFVCSKEGGSLLCCESCPAAFHPDCLNIE-MPDGSWYCNDC 878
Score = 51 (23.0 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 825 VILCDQ--CEREYHVGCL 840
++LCD+ C + YH+ CL
Sbjct: 1257 LVLCDRKSCTKAYHLSCL 1274
Score = 51 (23.0 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 13/46 (28%), Positives = 24/46 (52%)
Query: 271 EVGLGKEYEPGRVQMEMDEEKKNDIERELVENGVLESSMVGKHSST 316
+V +E E E K++ L+E G++E+++V K SS+
Sbjct: 150 DVSQSEENEQKTTNKERRNRKRSIKYDSLLEQGLVEAALVSKTSSS 195
Score = 48 (22.0 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 20/63 (31%), Positives = 24/63 (38%)
Query: 312 KHSSTLCNGESNVAKSVAVD---GNDEGKTVNVVVERPLRRFTRSLLQQKVELAKGSLSK 368
K SS L + N K V GN GKT N V R + Q L +G + K
Sbjct: 6 KRSSQLLTRKINYLKMKQVPEILGNTNGKTQNCEVNRECSVYLGKA-QLSATLQEGVMQK 64
Query: 369 DGG 371
G
Sbjct: 65 YNG 67
>UNIPROTKB|F1MFF9 [details] [associations]
symbol:Bt.62145 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:DAAA02043090 IPI:IPI00688794
Ensembl:ENSBTAT00000010688 Uniprot:F1MFF9
Length = 1852
Score = 152 (58.6 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 25/51 (49%), Positives = 35/51 (68%)
Query: 713 KENDD---LCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
+E DD C +C DGG+LLCCD+CP ++H+ C++ LP IP+G W C C
Sbjct: 355 EEEDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRC 405
Score = 134 (52.2 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 714 ENDDLCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
++ D C +C GG+++ CD+CPRA+H+ C+ L P G W C +C
Sbjct: 286 DHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHC 332
Score = 58 (25.5 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 801 DTELGGCVLCRG--RDFCKSRFGRRTVILCDQCEREYHVGCL 840
D + GGC +FC+ ++ CD C YH+ CL
Sbjct: 347 DEDEGGCEEEEDDHMEFCRVCKDGGELLCCDACPSSYHLHCL 388
Score = 43 (20.2 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 14/50 (28%), Positives = 24/50 (48%)
Query: 48 QSNVDSGCVLGPPEVKKLKTYESR-KKRKRQEQSVVVKETEDKREEEVKS 96
+ + G P + KK K + + KK KR+++ + ED +E KS
Sbjct: 14 EKSESEGSDYSPNKKKKKKLKDKKEKKAKRKKKDDEEDDNEDGCLKEPKS 63
Score = 42 (19.8 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 72 KKRKRQEQSVVVKETEDKREE 92
K++K S V ED+REE
Sbjct: 214 KRKKGSSVSASVSSEEDEREE 234
Score = 40 (19.1 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 7/30 (23%), Positives = 18/30 (60%)
Query: 68 YESRKKRKRQEQSVVVKETEDKREEEVKSD 97
Y KK+K++ + K+ + K++++ + D
Sbjct: 23 YSPNKKKKKKLKDKKEKKAKRKKKDDEEDD 52
Score = 38 (18.4 bits), Expect = 0.00036, Sum P(3) = 0.00036
Identities = 7/36 (19%), Positives = 21/36 (58%)
Query: 257 SDRVAMDVEEVKCEEVGLGKEYEPGRVQMEMDEEKK 292
+D ++ + E+++ + G +Y P + + + ++KK
Sbjct: 2 NDELSENEEDLEEKSESEGSDYSPNKKKKKKLKDKK 37
>UNIPROTKB|F1P5P6 [details] [associations]
symbol:PHF21A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR017956 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02178 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 SMART:SM00384 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003682 GO:GO:0000122 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0000118
GeneTree:ENSGT00530000063984 EMBL:AADN02033506 EMBL:AADN02033505
IPI:IPI00574652 Ensembl:ENSGALT00000013689 ArrayExpress:F1P5P6
Uniprot:F1P5P6
Length = 651
Score = 137 (53.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 27/68 (39%), Positives = 37/68 (54%)
Query: 704 LSLERPFSSKEND---DLCGICMDGGDLLCCDSCPRAFHIDCVSLP--GIPSGTWHCRYC 758
+SL P SS + D D C +C G LL CD+C R +H+DC+ P IP G W C C
Sbjct: 446 VSLPSP-SSTDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPKC 504
Query: 759 MNTFQKEK 766
+ K++
Sbjct: 505 QDQMLKKE 512
>UNIPROTKB|I3LDB0 [details] [associations]
symbol:I3LDB0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0001967
"suckling behavior" evidence=IEA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00628 Pfam:PF02178
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 SMART:SM00384
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 OMA:SCTVNCN
GeneTree:ENSGT00530000063984 EMBL:FP101987
Ensembl:ENSSSCT00000023373 Uniprot:I3LDB0
Length = 563
Score = 136 (52.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 704 LSLERPFSSKEN--DDLCGICMDGGDLLCCDSCPRAFHIDCVSLP--GIPSGTWHCRYCM 759
+SL P S+ + +D C +C G LL CD+C R +H+DC+ P IP G W C C
Sbjct: 354 VSLPSPTSTDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQ 413
Query: 760 NTFQKEK 766
+ K++
Sbjct: 414 DQMLKKE 420
>ZFIN|ZDB-GENE-030131-6456 [details] [associations]
symbol:phf21ab "PHD finger protein 21Ab"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0060324
"face development" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00628 Pfam:PF02178
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 SMART:SM00384
ZFIN:ZDB-GENE-030131-6456 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0060324
GeneTree:ENSGT00530000063984 EMBL:BX088562 IPI:IPI00499307
UniGene:Dr.80349 Ensembl:ENSDART00000021577 NextBio:20885937
Bgee:E7F750 Uniprot:E7F750
Length = 796
Score = 133 (51.9 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 24/74 (32%), Positives = 37/74 (50%)
Query: 695 VSLHELSIKLSLERPFSSKENDDLCGICMDGGDLLCCDSCPRAFHIDCVSLP--GIPSGT 752
+S+H S+ ++D C +C G LL CD+C R +H+DC+ P IP G
Sbjct: 440 LSVHPHSVPQPSPSSGDGDIHEDFCTVCRRSGQLLMCDTCSRVYHLDCLDPPLKNIPKGM 499
Query: 753 WHCRYCMNTFQKEK 766
W C C + K++
Sbjct: 500 WICPKCQDQILKKE 513
Score = 54 (24.1 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 556 IKEPLSHSSEMEPQPPSVELEESP 579
IK P S S + P P V+ EESP
Sbjct: 301 IKTPPSSSPPLPPPPAKVKREESP 324
>MGI|MGI:1924057 [details] [associations]
symbol:Phf12 "PHD finger protein 12" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0001106 "RNA
polymerase II transcription corepressor activity" evidence=ISO]
[GO:0001222 "transcription corepressor binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016580 "Sin3 complex" evidence=ISO]
[GO:0017053 "transcriptional repressor complex" evidence=ISO]
[GO:0035091 "phosphatidylinositol binding" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000253 InterPro:IPR001965 InterPro:IPR008984
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016
SMART:SM00249 MGI:MGI:1924057 GO:GO:0017053 GO:GO:0046872
GO:GO:0008270 Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035091 GO:GO:0001106
GO:GO:0016580 EMBL:AL669840 CTD:57649 eggNOG:NOG145066
HOGENOM:HOG000220810 HOVERGEN:HBG057884 OMA:MSSQAQG
OrthoDB:EOG4VHK63 ChiTaRS:PHF12 EMBL:AL845484 EMBL:BC043080
EMBL:AK129383 IPI:IPI00330525 IPI:IPI00515364 RefSeq:NP_777277.2
UniGene:Mm.274329 ProteinModelPortal:Q5SPL2 SMR:Q5SPL2
DIP:DIP-59633N PhosphoSite:Q5SPL2 PRIDE:Q5SPL2
Ensembl:ENSMUST00000049167 Ensembl:ENSMUST00000108360 GeneID:268448
KEGG:mmu:268448 GeneTree:ENSGT00440000033777 InParanoid:Q5SPL2
NextBio:392291 Bgee:Q5SPL2 CleanEx:MM_PHF12 Genevestigator:Q5SPL2
GermOnline:ENSMUSG00000037791 Uniprot:Q5SPL2
Length = 1003
Score = 144 (55.7 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 26/56 (46%), Positives = 33/56 (58%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLP----GIPSGTWHCRYCMNTFQKEK 766
N D C C +GGDLLCCD CP AFH+ C + P +P G W C C T +++K
Sbjct: 55 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC--TVRRKK 108
Score = 45 (20.9 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 825 VILCDQCEREYHVGCLK 841
+I CD C +H+ CL+
Sbjct: 286 LIQCDYCPLLFHMDCLE 302
>UNIPROTKB|E1B7A1 [details] [associations]
symbol:PHF12 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0035091 "phosphatidylinositol binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0016580 "Sin3 complex" evidence=IEA] [GO:0001222 "transcription
corepressor binding" evidence=IEA] [GO:0001106 "RNA polymerase II
transcription corepressor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR000253 InterPro:IPR001965
InterPro:IPR008984 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006
PROSITE:PS50016 SMART:SM00249 GO:GO:0017053 GO:GO:0046872
GO:GO:0008270 Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035091 GO:GO:0001106
GO:GO:0016580 CTD:57649 OMA:MSSQAQG GeneTree:ENSGT00440000033777
EMBL:DAAA02048610 IPI:IPI00688031 RefSeq:NP_001179060.1
UniGene:Bt.52047 PRIDE:E1B7A1 Ensembl:ENSBTAT00000021255
GeneID:507057 KEGG:bta:507057 NextBio:20867881 Uniprot:E1B7A1
Length = 1004
Score = 144 (55.7 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 26/56 (46%), Positives = 33/56 (58%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLP----GIPSGTWHCRYCMNTFQKEK 766
N D C C +GGDLLCCD CP AFH+ C + P +P G W C C T +++K
Sbjct: 55 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC--TVRRKK 108
Score = 45 (20.9 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 825 VILCDQCEREYHVGCLK 841
+I CD C +H+ CL+
Sbjct: 286 LIQCDYCPLLFHMDCLE 302
>UNIPROTKB|Q96QT6 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0001222
"transcription corepressor binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0035091 "phosphatidylinositol binding"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0001106 "RNA
polymerase II transcription corepressor activity" evidence=IDA]
[GO:0016580 "Sin3 complex" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000253 InterPro:IPR001965
InterPro:IPR008984 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006
PROSITE:PS50016 SMART:SM00249 GO:GO:0017053 GO:GO:0046872
GO:GO:0008270 Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035091 EMBL:CH471159
GO:GO:0001106 GO:GO:0016580 PDB:2LKM PDBsum:2LKM EMBL:AY030283
EMBL:AK024290 EMBL:AK160370 EMBL:BC001657 EMBL:BC121044
EMBL:AB040956 IPI:IPI00290033 IPI:IPI00292750 IPI:IPI00441976
IPI:IPI00607816 RefSeq:NP_001028733.1 RefSeq:NP_065940.1
UniGene:Hs.444173 PDB:2L9S PDBsum:2L9S ProteinModelPortal:Q96QT6
SMR:Q96QT6 DIP:DIP-59632N IntAct:Q96QT6 STRING:Q96QT6
PhosphoSite:Q96QT6 DMDM:71153050 PaxDb:Q96QT6 PRIDE:Q96QT6
Ensembl:ENST00000268756 Ensembl:ENST00000332830 GeneID:57649
KEGG:hsa:57649 UCSC:uc002hdg.1 UCSC:uc002hdj.1 CTD:57649
GeneCards:GC17M027232 H-InvDB:HIX0202392 HGNC:HGNC:20816
HPA:HPA021410 neXtProt:NX_Q96QT6 PharmGKB:PA134954478
eggNOG:NOG145066 HOGENOM:HOG000220810 HOVERGEN:HBG057884
InParanoid:Q96QT6 OMA:MSSQAQG OrthoDB:EOG4VHK63 ChiTaRS:PHF12
EvolutionaryTrace:Q96QT6 GenomeRNAi:57649 NextBio:64390
ArrayExpress:Q96QT6 Bgee:Q96QT6 CleanEx:HS_PHF12
Genevestigator:Q96QT6 GermOnline:ENSG00000109118 Uniprot:Q96QT6
Length = 1004
Score = 144 (55.7 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 26/56 (46%), Positives = 33/56 (58%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLP----GIPSGTWHCRYCMNTFQKEK 766
N D C C +GGDLLCCD CP AFH+ C + P +P G W C C T +++K
Sbjct: 55 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC--TVRRKK 108
Score = 45 (20.9 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 825 VILCDQCEREYHVGCLK 841
+I CD C +H+ CL+
Sbjct: 286 LIQCDYCPLLFHMDCLE 302
>UNIPROTKB|F1RNA4 [details] [associations]
symbol:PHF12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035091 "phosphatidylinositol binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0016580 "Sin3 complex" evidence=IEA] [GO:0001222 "transcription
corepressor binding" evidence=IEA] [GO:0001106 "RNA polymerase II
transcription corepressor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR000253 InterPro:IPR001965
InterPro:IPR008984 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006
PROSITE:PS50016 SMART:SM00249 GO:GO:0017053 GO:GO:0046872
GO:GO:0008270 Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035091 GO:GO:0001106
GO:GO:0016580 CTD:57649 OMA:MSSQAQG GeneTree:ENSGT00440000033777
EMBL:FP236132 RefSeq:XP_003131823.2 UniGene:Ssc.50204
Ensembl:ENSSSCT00000019351 GeneID:100515341 KEGG:ssc:100515341
Uniprot:F1RNA4
Length = 1004
Score = 144 (55.7 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 26/56 (46%), Positives = 33/56 (58%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLP----GIPSGTWHCRYCMNTFQKEK 766
N D C C +GGDLLCCD CP AFH+ C + P +P G W C C T +++K
Sbjct: 55 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC--TVRRKK 108
Score = 45 (20.9 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 825 VILCDQCEREYHVGCLK 841
+I CD C +H+ CL+
Sbjct: 286 LIQCDYCPLLFHMDCLE 302
>UNIPROTKB|F1NX04 [details] [associations]
symbol:PHF12 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0001106
"RNA polymerase II transcription corepressor activity"
evidence=IEA] [GO:0001222 "transcription corepressor binding"
evidence=IEA] [GO:0016580 "Sin3 complex" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0035091
"phosphatidylinositol binding" evidence=IEA] InterPro:IPR000253
InterPro:IPR001965 InterPro:IPR008984 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016 SMART:SM00240
SMART:SM00249 GO:GO:0017053 GO:GO:0046872 GO:GO:0008270
Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035091 GO:GO:0001106
GO:GO:0016580 OMA:MSSQAQG GeneTree:ENSGT00440000033777
EMBL:AADN02025853 IPI:IPI00589363 Ensembl:ENSGALT00000006417
Uniprot:F1NX04
Length = 1007
Score = 144 (55.7 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 26/56 (46%), Positives = 33/56 (58%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLP----GIPSGTWHCRYCMNTFQKEK 766
N D C C +GGDLLCCD CP AFH+ C + P +P G W C C T +++K
Sbjct: 53 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC--TVRRKK 106
Score = 45 (20.9 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 825 VILCDQCEREYHVGCLK 841
+I CD C +H+ CL+
Sbjct: 282 LIQCDYCPLLFHMDCLE 298
>UNIPROTKB|E2RTI2 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:AAEX03003635
EMBL:AAEX03003636 Ensembl:ENSCAFT00000026729 Uniprot:E2RTI2
Length = 1998
Score = 145 (56.1 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 26/57 (45%), Positives = 35/57 (61%)
Query: 707 ERPFSSKENDD---LCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
E +E DD C +C DGG+LLCCD+C ++HI C++ LP IP+G W C C
Sbjct: 442 EEEGEKEEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRC 498
Score = 134 (52.2 bits), Expect = 5.0e-05, Sum P(4) = 5.0e-05
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 714 ENDDLCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
++ D C +C GG+++ CD+CPRA+H+ C+ L P G W C +C
Sbjct: 376 DHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHC 422
Score = 57 (25.1 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 21/74 (28%), Positives = 33/74 (44%)
Query: 58 GPPEVKKLKTYESRKKRKRQEQSVVVKETEDKREE-EVKSDVFDVI--NERERPIREK-E 113
GP + K+ K + RK++K + E ++ RE+ E + +R R REK E
Sbjct: 52 GPKKQKENKPGKPRKRKKLDSEEEFGSERDEYREKSESGGSEYGTGPGRKRRRKHREKKE 111
Query: 114 SKDDSENMGVGERG 127
K G G+ G
Sbjct: 112 KKTKRRKKGEGDGG 125
Score = 52 (23.4 bits), Expect = 5.0e-05, Sum P(4) = 5.0e-05
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 814 DFCKSRFGRRTVILCDQCEREYHVGCL 840
++C+ ++ CD C YH+ CL
Sbjct: 455 EYCRVCKDGGELLCCDACISSYHIHCL 481
Score = 41 (19.5 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 10/25 (40%), Positives = 11/25 (44%)
Query: 571 PSVELEESPAPSGELTDTSNRSPEP 595
P E EES SG + S R P
Sbjct: 316 PEPEAEESDLDSGSVHSASGRPDGP 340
Score = 37 (18.1 bits), Expect = 0.00012, Sum P(4) = 0.00012
Identities = 10/40 (25%), Positives = 22/40 (55%)
Query: 271 EVGL--GKEYEPGRVQMEMDEEKKNDIERELVENGVLESS 308
++GL GK + G ++ DE + + E +++G + S+
Sbjct: 294 KLGLLGGKRKKGGSYVLQSDEGPEPEAEESDLDSGSVHSA 333
>UNIPROTKB|F1ST12 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 CTD:1107 KO:K11642 OMA:EPEPGYR
EMBL:CU972380 RefSeq:XP_003132000.1 UniGene:Ssc.1663
Ensembl:ENSSSCT00000019548 GeneID:100188906 KEGG:ssc:100188906
Uniprot:F1ST12
Length = 2002
Score = 145 (56.1 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 26/57 (45%), Positives = 35/57 (61%)
Query: 707 ERPFSSKENDD---LCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
E +E DD C +C DGG+LLCCD+C ++HI C++ LP IP+G W C C
Sbjct: 444 EEEGEKEEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRC 500
Score = 137 (53.3 bits), Expect = 2.5e-05, Sum P(4) = 2.5e-05
Identities = 26/86 (30%), Positives = 41/86 (47%)
Query: 714 ENDDLCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC----MNTFQKEKF 767
++ D C +C GG+++ CD+CPRA+H+ C+ L P G W C +C + KE+
Sbjct: 377 DHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQWEAKEED 436
Query: 768 VEYNANARAAGRIEGVDPFAQMVSRC 793
+Y G E D + C
Sbjct: 437 DDYEEEGEEEGEKEEEDDHMEYCRVC 462
Score = 57 (25.1 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 21/74 (28%), Positives = 33/74 (44%)
Query: 58 GPPEVKKLKTYESRKKRKRQEQSVVVKETEDKREE-EVKSDVFDVI--NERERPIREK-E 113
GP + K+ K + RK++K + E ++ RE+ E + +R R REK E
Sbjct: 53 GPKKQKENKPGKPRKRKKLDSEEEFGSERDEYREKSESGGSEYGTGPGRKRRRKHREKKE 112
Query: 114 SKDDSENMGVGERG 127
K G G+ G
Sbjct: 113 KKTKRRKKGEGDGG 126
Score = 52 (23.4 bits), Expect = 2.5e-05, Sum P(4) = 2.5e-05
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 814 DFCKSRFGRRTVILCDQCEREYHVGCL 840
++C+ ++ CD C YH+ CL
Sbjct: 457 EYCRVCKDGGELLCCDACISSYHIHCL 483
Score = 44 (20.5 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 21/65 (32%), Positives = 27/65 (41%)
Query: 48 QSNVDSGCVL-------GPPEVKKLKTYE-SRKKRKRQEQSVVVKETEDKREEEVKSDVF 99
+S++DSG V GP KKLK RKK+K V E E E D
Sbjct: 323 ESDLDSGSVHSASGRPDGPVRTKKLKRGRPGRKKKKVLGCPAVAGEEEVDGYETDHQDYC 382
Query: 100 DVINE 104
+V +
Sbjct: 383 EVCQQ 387
Score = 41 (19.5 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 10/25 (40%), Positives = 11/25 (44%)
Query: 571 PSVELEESPAPSGELTDTSNRSPEP 595
P E EES SG + S R P
Sbjct: 317 PEPEAEESDLDSGSVHSASGRPDGP 341
Score = 37 (18.1 bits), Expect = 6.1e-05, Sum P(4) = 6.1e-05
Identities = 10/40 (25%), Positives = 22/40 (55%)
Query: 271 EVGL--GKEYEPGRVQMEMDEEKKNDIERELVENGVLESS 308
++GL GK + G ++ DE + + E +++G + S+
Sbjct: 295 KLGLLGGKRKKGGSYVLQSDEGPEPEAEESDLDSGSVHSA 334
>UNIPROTKB|F1LM99 [details] [associations]
symbol:F1LM99 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000253 InterPro:IPR001965 InterPro:IPR008984
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016
SMART:SM00249 GO:GO:0017053 GO:GO:0046872 GO:GO:0008270
Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035091 GO:GO:0001106
GO:GO:0016580 OMA:MSSQAQG GeneTree:ENSGT00440000033777
IPI:IPI00369959 Ensembl:ENSRNOT00000056234 ArrayExpress:F1LM99
Uniprot:F1LM99
Length = 1003
Score = 143 (55.4 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 28/68 (41%), Positives = 36/68 (52%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLP----GIPSGTWHCRYCMNTFQKEKFVEY 770
N D C C +GGDLLCCD CP AFH+ C + P +P G W C C T +++
Sbjct: 55 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC--TVRRKASRTQ 112
Query: 771 NANARAAG 778
+A R G
Sbjct: 113 SAKLRWXG 120
Score = 45 (20.9 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 825 VILCDQCEREYHVGCLK 841
+I CD C +H+ CL+
Sbjct: 285 LIQCDYCPLLFHMDCLE 301
>UNIPROTKB|E2RHA0 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 EMBL:AAEX03015287 RefSeq:XP_867754.2
Ensembl:ENSCAFT00000023774 GeneID:477714 KEGG:cfa:477714
Uniprot:E2RHA0
Length = 1912
Score = 152 (58.6 bits), Expect = 2.8e-05, Sum P(3) = 2.8e-05
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 713 KENDD----LCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
+E DD C +C DGG+LLCCD+CP ++HI C++ LP IP+G W C C
Sbjct: 442 EEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRC 493
Score = 131 (51.2 bits), Expect = 0.00020, Sum P(4) = 0.00020
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 714 ENDDLCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
++ D C +C GG+++ CD+CPRA+H+ C+ + P G W C +C
Sbjct: 368 DHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHC 414
Score = 57 (25.1 bits), Expect = 0.00020, Sum P(4) = 0.00020
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 814 DFCKSRFGRRTVILCDQCEREYHVGCL 840
+FC+ ++ CD C YH+ CL
Sbjct: 450 EFCRVCKDGGELLCCDTCPSSYHIHCL 476
Score = 45 (20.9 bits), Expect = 2.8e-05, Sum P(3) = 2.8e-05
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 68 YESRKKRKRQEQSVVVKETEDKREEEVKSD 97
Y KK+K++ K+++ KR+EE + D
Sbjct: 110 YTPGKKKKKKLGPKKEKKSKSKRKEEEEED 139
Score = 44 (20.5 bits), Expect = 2.8e-05, Sum P(3) = 2.8e-05
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 551 AGSAEIKEPLSHSSEMEPQPPSVELEESPAPSGE 584
A + + E + ++E+ P PP VE+ A + E
Sbjct: 231 AAAVAVVESMVTATEVAPPPPPVEVPIRKAKTKE 264
Score = 43 (20.2 bits), Expect = 0.00031, Sum P(4) = 0.00031
Identities = 11/44 (25%), Positives = 23/44 (52%)
Query: 58 GPPEVKKLKTYESRK-KRKRQEQSVVVKETEDKREEEVKSDVFD 100
G + KKL + +K K KR+E+ + +D +E + + + +
Sbjct: 113 GKKKKKKLGPKKEKKSKSKRKEEEEEDDDDDDSKEPKSSAQLLE 156
Score = 41 (19.5 bits), Expect = 0.00052, Sum P(3) = 0.00052
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 63 KKLKTYESRKKRKRQEQSVVVKETEDKREE 92
KKL+T ++KK+K +E+ V E ++
Sbjct: 344 KKLRT--TKKKKKGEEEVTAVDGYETDHQD 371
Score = 40 (19.1 bits), Expect = 0.00060, Sum P(4) = 0.00060
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 265 EEVKCEEVGLGKEYEPGRVQMEM---DEEKKNDIERE 298
EEV G +Y PG+ + + +EKK+ +R+
Sbjct: 97 EEVALRSDSEGSDYTPGKKKKKKLGPKKEKKSKSKRK 133
>UNIPROTKB|F1SLR5 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 OMA:ERMLLCR EMBL:CU914489 EMBL:GACC01000070
RefSeq:XP_003126577.3 UniGene:Ssc.25044 Ensembl:ENSSSCT00000000759
GeneID:100515610 KEGG:ssc:100515610 Uniprot:F1SLR5
Length = 1912
Score = 152 (58.6 bits), Expect = 2.8e-05, Sum P(3) = 2.8e-05
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 713 KENDD----LCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
+E DD C +C DGG+LLCCD+CP ++HI C++ LP IP+G W C C
Sbjct: 442 EEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRC 493
Score = 131 (51.2 bits), Expect = 0.00020, Sum P(4) = 0.00020
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 714 ENDDLCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
++ D C +C GG+++ CD+CPRA+H+ C+ + P G W C +C
Sbjct: 368 DHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHC 414
Score = 57 (25.1 bits), Expect = 0.00020, Sum P(4) = 0.00020
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 814 DFCKSRFGRRTVILCDQCEREYHVGCL 840
+FC+ ++ CD C YH+ CL
Sbjct: 450 EFCRVCKDGGELLCCDTCPSSYHIHCL 476
Score = 45 (20.9 bits), Expect = 2.8e-05, Sum P(3) = 2.8e-05
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 68 YESRKKRKRQEQSVVVKETEDKREEEVKSD 97
Y KK+K++ K+++ KR+EE + D
Sbjct: 110 YTPGKKKKKKLGPKKEKKSKSKRKEEEEED 139
Score = 44 (20.5 bits), Expect = 2.8e-05, Sum P(3) = 2.8e-05
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 551 AGSAEIKEPLSHSSEMEPQPPSVELEESPAPSGE 584
A + + E + ++E+ P PP VE+ A + E
Sbjct: 231 AAAVAVVESMVTATEVAPPPPPVEVPIRKAKTKE 264
Score = 43 (20.2 bits), Expect = 0.00031, Sum P(4) = 0.00031
Identities = 11/44 (25%), Positives = 23/44 (52%)
Query: 58 GPPEVKKLKTYESRK-KRKRQEQSVVVKETEDKREEEVKSDVFD 100
G + KKL + +K K KR+E+ + +D +E + + + +
Sbjct: 113 GKKKKKKLGPKKEKKSKSKRKEEEEEDDDDDDSKEPKSSAQLLE 156
Score = 41 (19.5 bits), Expect = 0.00052, Sum P(3) = 0.00052
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 63 KKLKTYESRKKRKRQEQSVVVKETEDKREE 92
KKL+T ++KK+K +E+ V E ++
Sbjct: 344 KKLRT--TKKKKKGEEEVTAVDGYETDHQD 371
Score = 40 (19.1 bits), Expect = 0.00060, Sum P(4) = 0.00060
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 265 EEVKCEEVGLGKEYEPGRVQMEM---DEEKKNDIERE 298
EEV G +Y PG+ + + +EKK+ +R+
Sbjct: 97 EEVALRSDSEGSDYTPGKKKKKKLGPKKEKKSKSKRK 133
>UNIPROTKB|J9NW81 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:ERMLLCR EMBL:AAEX03015287 Ensembl:ENSCAFT00000048002
Uniprot:J9NW81
Length = 1932
Score = 152 (58.6 bits), Expect = 2.9e-05, Sum P(3) = 2.9e-05
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 713 KENDD----LCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
+E DD C +C DGG+LLCCD+CP ++HI C++ LP IP+G W C C
Sbjct: 462 EEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRC 513
Score = 131 (51.2 bits), Expect = 0.00021, Sum P(4) = 0.00021
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 714 ENDDLCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
++ D C +C GG+++ CD+CPRA+H+ C+ + P G W C +C
Sbjct: 388 DHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHC 434
Score = 57 (25.1 bits), Expect = 0.00021, Sum P(4) = 0.00021
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 814 DFCKSRFGRRTVILCDQCEREYHVGCL 840
+FC+ ++ CD C YH+ CL
Sbjct: 470 EFCRVCKDGGELLCCDTCPSSYHIHCL 496
Score = 45 (20.9 bits), Expect = 2.9e-05, Sum P(3) = 2.9e-05
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 68 YESRKKRKRQEQSVVVKETEDKREEEVKSD 97
Y KK+K++ K+++ KR+EE + D
Sbjct: 130 YTPGKKKKKKLGPKKEKKSKSKRKEEEEED 159
Score = 44 (20.5 bits), Expect = 2.9e-05, Sum P(3) = 2.9e-05
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 551 AGSAEIKEPLSHSSEMEPQPPSVELEESPAPSGE 584
A + + E + ++E+ P PP VE+ A + E
Sbjct: 251 AAAVAVVESMVTATEVAPPPPPVEVPIRKAKTKE 284
Score = 43 (20.2 bits), Expect = 0.00032, Sum P(4) = 0.00032
Identities = 11/44 (25%), Positives = 23/44 (52%)
Query: 58 GPPEVKKLKTYESRK-KRKRQEQSVVVKETEDKREEEVKSDVFD 100
G + KKL + +K K KR+E+ + +D +E + + + +
Sbjct: 133 GKKKKKKLGPKKEKKSKSKRKEEEEEDDDDDDSKEPKSSAQLLE 176
Score = 41 (19.5 bits), Expect = 0.00053, Sum P(3) = 0.00053
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 63 KKLKTYESRKKRKRQEQSVVVKETEDKREE 92
KKL+T ++KK+K +E+ V E ++
Sbjct: 364 KKLRT--TKKKKKGEEEVTAVDGYETDHQD 391
Score = 40 (19.1 bits), Expect = 0.00063, Sum P(4) = 0.00062
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 265 EEVKCEEVGLGKEYEPGRVQMEM---DEEKKNDIERE 298
EEV G +Y PG+ + + +EKK+ +R+
Sbjct: 117 EEVALRSDSEGSDYTPGKKKKKKLGPKKEKKSKSKRK 153
>UNIPROTKB|F1SMZ1 [details] [associations]
symbol:SP110 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000770 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR004865 InterPro:IPR019787 Pfam:PF01342 Pfam:PF03172
PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414 SMART:SM00249
SMART:SM00258 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:3.10.390.10 InterPro:IPR010919
SUPFAM:SSF63763 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00510000046835 OMA:DGTSEMN EMBL:CU683888
Ensembl:ENSSSCT00000017706 Uniprot:F1SMZ1
Length = 679
Score = 136 (52.9 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 34/91 (37%), Positives = 46/91 (50%)
Query: 669 SPSQFEAHAGWASRRKPFQHIYTSNGVSLHELSIKLSLERPFSSKENDDLCGICMDGGDL 728
+P +FE G +K ++ G +L L IK P +SKE C +C GG L
Sbjct: 507 TPREFEIE-GKQKHKKYWKRSVLCGGKTLEHL-IK-----PENSKE----CEVCCGGGLL 555
Query: 729 LCCDSCPRAFHIDCVSLPGIPSGT-WHCRYC 758
LCCD+CPRAFH +C P + W C +C
Sbjct: 556 LCCDTCPRAFHENCHIPPAVAKRRPWSCTFC 586
Score = 47 (21.6 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 554 AEIKEPLSHSSEMEPQPPS-VELEESPA---PSGELTDTSNRSPEPNSAQT 600
+E P+ S+E+ P+PPS L ++P G LT N + N +++
Sbjct: 164 SEPAAPVQPSTEILPKPPSPAGLAKTPPGIIQEGRLTPVFNDQGQLNISRS 214
>UNIPROTKB|F1S8S0 [details] [associations]
symbol:WHSC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060348 "bone development" evidence=IEA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003290 "atrial septum secundum morphogenesis" evidence=IEA]
[GO:0003289 "atrial septum primum morphogenesis" evidence=IEA]
[GO:0003149 "membranous septum morphogenesis" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR009071 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855 Pfam:PF00505
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0031965
GO:GO:0003682 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0003289 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0060348 GO:GO:0018024
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 GO:GO:0003149 GO:GO:0003290 OMA:DVKRCVV EMBL:FP102229
EMBL:FP102127 Ensembl:ENSSSCT00000009499 Uniprot:F1S8S0
Length = 1361
Score = 140 (54.3 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 22/44 (50%), Positives = 29/44 (65%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYC 758
N C +C GG LLCC+SCP AFH DC+++ +P G+W C C
Sbjct: 826 NVSWCFVCSKGGSLLCCESCPAAFHPDCLNIE-MPDGSWFCNDC 868
Score = 50 (22.7 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 811 RGRDFCKSRFGRRTVILCDQ--CEREYHVGCL 840
R D C ++LCD+ C + YH+ CL
Sbjct: 1233 RSEDECFRCGDGGQLVLCDRKSCTKAYHLPCL 1264
>RGD|1307955 [details] [associations]
symbol:Whsc1 "Wolf-Hirschhorn syndrome candidate 1"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003149 "membranous septum morphogenesis" evidence=ISO]
[GO:0003289 "atrial septum primum morphogenesis" evidence=ISO]
[GO:0003290 "atrial septum secundum morphogenesis" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0016568 "chromatin modification" evidence=ISO]
[GO:0018022 "peptidyl-lysine methylation" evidence=ISO] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=ISO]
[GO:0031965 "nuclear membrane" evidence=ISO] [GO:0034968 "histone
lysine methylation" evidence=ISO] [GO:0060348 "bone development"
evidence=ISO] REFSEQ:NM_001191552 Ncbi:NP_001178481
Length = 1346
Score = 140 (54.3 bits), Expect = 3.5e-05, Sum P(4) = 3.5e-05
Identities = 22/44 (50%), Positives = 29/44 (65%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYC 758
N C +C GG LLCC++CP AFH DC+S+ +P G+W C C
Sbjct: 811 NVSWCFVCSKGGSLLCCEACPAAFHPDCLSIE-MPDGSWFCNDC 853
Score = 51 (23.0 bits), Expect = 3.5e-05, Sum P(4) = 3.5e-05
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 825 VILCDQ--CEREYHVGCL 840
++LCD+ C + YH+ CL
Sbjct: 1232 LVLCDRKFCTKAYHLSCL 1249
Score = 44 (20.5 bits), Expect = 3.5e-05, Sum P(4) = 3.5e-05
Identities = 10/26 (38%), Positives = 19/26 (73%)
Query: 291 KKNDIERE-LVENGVLESSMVGKHSS 315
+K I+ + L+E G++E+++V K SS
Sbjct: 149 RKRSIKYDSLLEQGLVEAALVSKISS 174
Score = 43 (20.2 bits), Expect = 3.5e-05, Sum P(4) = 3.5e-05
Identities = 12/53 (22%), Positives = 26/53 (49%)
Query: 532 GVEELMLLCKSCVELKESQAGSAEIKEPLSHSSEMEPQPPSVELEESPAPSGE 584
G E+ LC+ + ++A ++ +P+S + + V+ EE+ + S E
Sbjct: 266 GEEQFEKLCQESAKQAPTKAEKIKLLKPISGRLRAQWEMGIVQAEEAASMSVE 318
Score = 37 (18.1 bits), Expect = 0.00016, Sum P(4) = 0.00016
Identities = 15/69 (21%), Positives = 29/69 (42%)
Query: 259 RVAMDVEEVKCEEVGLGKEYEPGRVQMEMDEEKKNDIERELVENGVLESSMVGKHSSTLC 318
++ + +EVK G+G ++ E K + + + ESS+ G ++ +
Sbjct: 77 KLCFETQEVK----GIGTPPNTTPIKNGSPEIKLKITKTYMNGKPLFESSICGDGAADMS 132
Query: 319 NGESNVAKS 327
E N KS
Sbjct: 133 QSEENGQKS 141
>UNIPROTKB|F5GWX5 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:AC006064
IPI:IPI00000846 HGNC:HGNC:1919 ChiTaRS:CHD4
ProteinModelPortal:F5GWX5 SMR:F5GWX5 PRIDE:F5GWX5
Ensembl:ENST00000544040 UCSC:uc001qpn.3 ArrayExpress:F5GWX5
Bgee:F5GWX5 Uniprot:F5GWX5
Length = 1905
Score = 152 (58.6 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 713 KENDD----LCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
+E DD C +C DGG+LLCCD+CP ++HI C++ LP IP+G W C C
Sbjct: 435 EEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRC 486
Score = 131 (51.2 bits), Expect = 0.00025, Sum P(4) = 0.00025
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 714 ENDDLCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
++ D C +C GG+++ CD+CPRA+H+ C+ + P G W C +C
Sbjct: 361 DHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHC 407
Score = 57 (25.1 bits), Expect = 0.00025, Sum P(4) = 0.00025
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 814 DFCKSRFGRRTVILCDQCEREYHVGCL 840
+FC+ ++ CD C YH+ CL
Sbjct: 443 EFCRVCKDGGELLCCDTCPSSYHIHCL 469
Score = 44 (20.5 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 551 AGSAEIKEPLSHSSEMEPQPPSVELEESPAPSGE 584
A + + E + ++E+ P PP VE+ A + E
Sbjct: 224 AAAVAVVESMVTATEVAPPPPPVEVPIRKAKTKE 257
Score = 44 (20.5 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 11/44 (25%), Positives = 23/44 (52%)
Query: 58 GPPEVKKLKTYESRK-KRKRQEQSVVVKETEDKREEEVKSDVFD 100
G + KKL + +K K KR+E+ + +D +E + + + +
Sbjct: 106 GKKKKKKLGPKKEKKSKSKRKEEEEEEDDDDDSKEPKSSAQLLE 149
Score = 41 (19.5 bits), Expect = 0.00048, Sum P(4) = 0.00048
Identities = 9/30 (30%), Positives = 18/30 (60%)
Query: 68 YESRKKRKRQEQSVVVKETEDKREEEVKSD 97
Y KK+K++ K+++ KR+EE + +
Sbjct: 103 YTPGKKKKKKLGPKKEKKSKSKRKEEEEEE 132
Score = 41 (19.5 bits), Expect = 0.00051, Sum P(3) = 0.00051
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 63 KKLKTYESRKKRKRQEQSVVVKETEDKREE 92
KKL+T ++KK+K +E+ V E ++
Sbjct: 337 KKLRT--TKKKKKGEEEVTAVDGYETDHQD 364
Score = 41 (19.5 bits), Expect = 0.00051, Sum P(3) = 0.00051
Identities = 10/41 (24%), Positives = 18/41 (43%)
Query: 554 AEIKEPLSHSSEMEPQPPSVELEESPAPSGELTDTSNRSPE 594
+E + P + +P ++ +S EL D+S PE
Sbjct: 44 SETETPKLKKKKKPKKPRDPKIPKSKRQKKELGDSSGEGPE 84
Score = 40 (19.1 bits), Expect = 0.00059, Sum P(4) = 0.00059
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 265 EEVKCEEVGLGKEYEPGRVQMEM---DEEKKNDIERE 298
EEV G +Y PG+ + + +EKK+ +R+
Sbjct: 90 EEVALRSDSEGSDYTPGKKKKKKLGPKKEKKSKSKRK 126
>UNIPROTKB|Q14839 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005813 "centrosome" evidence=IDA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006357 GO:GO:0006351 GO:GO:0016568
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786 PROSITE:PS01359
Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 EMBL:X86691
EMBL:AC006064 EMBL:BC038596 IPI:IPI00000846 IPI:IPI00455210
RefSeq:NP_001264.2 UniGene:Hs.162233 PDB:1MM2 PDB:1MM3 PDB:2EE1
PDB:2L5U PDB:2L75 PDBsum:1MM2 PDBsum:1MM3 PDBsum:2EE1 PDBsum:2L5U
PDBsum:2L75 ProteinModelPortal:Q14839 SMR:Q14839 DIP:DIP-31183N
IntAct:Q14839 MINT:MINT-349766 STRING:Q14839 PhosphoSite:Q14839
DMDM:311033360 PaxDb:Q14839 PRIDE:Q14839 DNASU:1108
Ensembl:ENST00000309577 Ensembl:ENST00000357008
Ensembl:ENST00000544484 GeneID:1108 KEGG:hsa:1108 UCSC:uc001qpo.3
UCSC:uc001qpp.3 CTD:1108 GeneCards:GC12M006679 H-InvDB:HIX0201859
HGNC:HGNC:1919 HPA:HPA012008 MIM:603277 neXtProt:NX_Q14839
PharmGKB:PA26455 KO:K11643 OMA:ERMLLCR OrthoDB:EOG4WH8JX
ChiTaRS:CHD4 EvolutionaryTrace:Q14839 GenomeRNAi:1108 NextBio:4598
PMAP-CutDB:Q14839 ArrayExpress:Q14839 Bgee:Q14839 CleanEx:HS_CHD4
Genevestigator:Q14839 GermOnline:ENSG00000111642 Uniprot:Q14839
Length = 1912
Score = 152 (58.6 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 713 KENDD----LCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
+E DD C +C DGG+LLCCD+CP ++HI C++ LP IP+G W C C
Sbjct: 442 EEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRC 493
Score = 131 (51.2 bits), Expect = 0.00025, Sum P(4) = 0.00025
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 714 ENDDLCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
++ D C +C GG+++ CD+CPRA+H+ C+ + P G W C +C
Sbjct: 368 DHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHC 414
Score = 57 (25.1 bits), Expect = 0.00025, Sum P(4) = 0.00025
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 814 DFCKSRFGRRTVILCDQCEREYHVGCL 840
+FC+ ++ CD C YH+ CL
Sbjct: 450 EFCRVCKDGGELLCCDTCPSSYHIHCL 476
Score = 44 (20.5 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 551 AGSAEIKEPLSHSSEMEPQPPSVELEESPAPSGE 584
A + + E + ++E+ P PP VE+ A + E
Sbjct: 231 AAAVAVVESMVTATEVAPPPPPVEVPIRKAKTKE 264
Score = 44 (20.5 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 11/44 (25%), Positives = 23/44 (52%)
Query: 58 GPPEVKKLKTYESRK-KRKRQEQSVVVKETEDKREEEVKSDVFD 100
G + KKL + +K K KR+E+ + +D +E + + + +
Sbjct: 113 GKKKKKKLGPKKEKKSKSKRKEEEEEEDDDDDSKEPKSSAQLLE 156
Score = 41 (19.5 bits), Expect = 0.00048, Sum P(4) = 0.00048
Identities = 9/30 (30%), Positives = 18/30 (60%)
Query: 68 YESRKKRKRQEQSVVVKETEDKREEEVKSD 97
Y KK+K++ K+++ KR+EE + +
Sbjct: 110 YTPGKKKKKKLGPKKEKKSKSKRKEEEEEE 139
Score = 41 (19.5 bits), Expect = 0.00052, Sum P(3) = 0.00052
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 63 KKLKTYESRKKRKRQEQSVVVKETEDKREE 92
KKL+T ++KK+K +E+ V E ++
Sbjct: 344 KKLRT--TKKKKKGEEEVTAVDGYETDHQD 371
Score = 40 (19.1 bits), Expect = 0.00060, Sum P(4) = 0.00060
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 265 EEVKCEEVGLGKEYEPGRVQMEM---DEEKKNDIERE 298
EEV G +Y PG+ + + +EKK+ +R+
Sbjct: 97 EEVALRSDSEGSDYTPGKKKKKKLGPKKEKKSKSKRK 133
>UNIPROTKB|E9PU01 [details] [associations]
symbol:Chd4 "Protein Chd4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI01016558 PRIDE:E9PU01 Ensembl:ENSRNOT00000055970
ArrayExpress:E9PU01 Uniprot:E9PU01
Length = 1915
Score = 152 (58.6 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 713 KENDD----LCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
+E DD C +C DGG+LLCCD+CP ++HI C++ LP IP+G W C C
Sbjct: 435 EEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRC 486
Score = 131 (51.2 bits), Expect = 0.00025, Sum P(4) = 0.00025
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 714 ENDDLCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
++ D C +C GG+++ CD+CPRA+H+ C+ + P G W C +C
Sbjct: 361 DHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHC 407
Score = 57 (25.1 bits), Expect = 0.00025, Sum P(4) = 0.00025
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 814 DFCKSRFGRRTVILCDQCEREYHVGCL 840
+FC+ ++ CD C YH+ CL
Sbjct: 443 EFCRVCKDGGELLCCDTCPSSYHIHCL 469
Score = 44 (20.5 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 551 AGSAEIKEPLSHSSEMEPQPPSVELEESPAPSGE 584
A + + E + ++E+ P PP VE+ A + E
Sbjct: 224 AAAVAVVESMVTATEVAPPPPPVEVPIRKAKTKE 257
Score = 44 (20.5 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 11/44 (25%), Positives = 23/44 (52%)
Query: 58 GPPEVKKLKTYESRK-KRKRQEQSVVVKETEDKREEEVKSDVFD 100
G + KKL + +K K KR+E+ + +D +E + + + +
Sbjct: 106 GKKKKKKLGPKKEKKSKSKRKEEEEEEDDDDDSKEPKSSAQLLE 149
Score = 41 (19.5 bits), Expect = 0.00049, Sum P(4) = 0.00049
Identities = 9/30 (30%), Positives = 18/30 (60%)
Query: 68 YESRKKRKRQEQSVVVKETEDKREEEVKSD 97
Y KK+K++ K+++ KR+EE + +
Sbjct: 103 YTPGKKKKKKLGPKKEKKSKSKRKEEEEEE 132
Score = 41 (19.5 bits), Expect = 0.00052, Sum P(3) = 0.00052
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 63 KKLKTYESRKKRKRQEQSVVVKETEDKREE 92
KKL+T ++KK+K +E+ V E ++
Sbjct: 337 KKLRT--AKKKKKGEEEVTAVDGYETDHQD 364
Score = 41 (19.5 bits), Expect = 0.00052, Sum P(3) = 0.00052
Identities = 10/41 (24%), Positives = 18/41 (43%)
Query: 554 AEIKEPLSHSSEMEPQPPSVELEESPAPSGELTDTSNRSPE 594
+E + P + +P ++ +S EL D+S PE
Sbjct: 44 SEAETPKLKKKKKPKKPRDPKIPKSKRQKKELGDSSGEGPE 84
Score = 38 (18.4 bits), Expect = 0.00093, Sum P(4) = 0.00093
Identities = 7/31 (22%), Positives = 17/31 (54%)
Query: 85 ETEDKREEEVKSDVFDVINERERPIREKESK 115
E ED EE++ + ++++P + ++ K
Sbjct: 34 ENEDDPEEDLSEAETPKLKKKKKPKKPRDPK 64
>RGD|1583154 [details] [associations]
symbol:LOC686349 "similar to Wolf-Hirschhorn syndrome candidate
1 protein isoform 3" species:10116 "Rattus norvegicus" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0003149 "membranous septum
morphogenesis" evidence=IEA] [GO:0003289 "atrial septum primum
morphogenesis" evidence=IEA] [GO:0003290 "atrial septum secundum
morphogenesis" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0060348 "bone development"
evidence=IEA] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR009071
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 Pfam:PF00505 RGD:1583154
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0031965
GO:GO:0003682 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0003289 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0060348 GO:GO:0018024
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 GO:GO:0003149 GO:GO:0003290 IPI:IPI00779496
Ensembl:ENSRNOT00000021952 OrthoDB:EOG4V6ZFW ArrayExpress:D4A9J4
Uniprot:D4A9J4
Length = 1366
Score = 140 (54.3 bits), Expect = 3.7e-05, Sum P(4) = 3.7e-05
Identities = 22/44 (50%), Positives = 29/44 (65%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYC 758
N C +C GG LLCC++CP AFH DC+S+ +P G+W C C
Sbjct: 831 NVSWCFVCSKGGSLLCCEACPAAFHPDCLSIE-MPDGSWFCNDC 873
Score = 51 (23.0 bits), Expect = 3.7e-05, Sum P(4) = 3.7e-05
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 825 VILCDQ--CEREYHVGCL 840
++LCD+ C + YH+ CL
Sbjct: 1252 LVLCDRKFCTKAYHLSCL 1269
Score = 44 (20.5 bits), Expect = 3.7e-05, Sum P(4) = 3.7e-05
Identities = 10/26 (38%), Positives = 19/26 (73%)
Query: 291 KKNDIERE-LVENGVLESSMVGKHSS 315
+K I+ + L+E G++E+++V K SS
Sbjct: 169 RKRSIKYDSLLEQGLVEAALVSKISS 194
Score = 43 (20.2 bits), Expect = 3.7e-05, Sum P(4) = 3.7e-05
Identities = 12/53 (22%), Positives = 26/53 (49%)
Query: 532 GVEELMLLCKSCVELKESQAGSAEIKEPLSHSSEMEPQPPSVELEESPAPSGE 584
G E+ LC+ + ++A ++ +P+S + + V+ EE+ + S E
Sbjct: 286 GEEQFEKLCQESAKQAPTKAEKIKLLKPISGRLRAQWEMGIVQAEEAASMSVE 338
Score = 37 (18.1 bits), Expect = 0.00017, Sum P(4) = 0.00017
Identities = 15/69 (21%), Positives = 29/69 (42%)
Query: 259 RVAMDVEEVKCEEVGLGKEYEPGRVQMEMDEEKKNDIERELVENGVLESSMVGKHSSTLC 318
++ + +EVK G+G ++ E K + + + ESS+ G ++ +
Sbjct: 97 KLCFETQEVK----GIGTPPNTTPIKNGSPEIKLKITKTYMNGKPLFESSICGDGAADMS 152
Query: 319 NGESNVAKS 327
E N KS
Sbjct: 153 QSEENGQKS 161
>UNIPROTKB|F1LM59 [details] [associations]
symbol:Chd4 "Protein Chd4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI00365698 PRIDE:F1LM59 Ensembl:ENSRNOT00000024864
ArrayExpress:F1LM59 Uniprot:F1LM59
Length = 1945
Score = 152 (58.6 bits), Expect = 3.8e-05, Sum P(3) = 3.8e-05
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 713 KENDD----LCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
+E DD C +C DGG+LLCCD+CP ++HI C++ LP IP+G W C C
Sbjct: 463 EEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRC 514
Score = 131 (51.2 bits), Expect = 0.00027, Sum P(4) = 0.00027
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 714 ENDDLCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
++ D C +C GG+++ CD+CPRA+H+ C+ + P G W C +C
Sbjct: 389 DHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHC 435
Score = 57 (25.1 bits), Expect = 0.00027, Sum P(4) = 0.00027
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 814 DFCKSRFGRRTVILCDQCEREYHVGCL 840
+FC+ ++ CD C YH+ CL
Sbjct: 471 EFCRVCKDGGELLCCDTCPSSYHIHCL 497
Score = 44 (20.5 bits), Expect = 3.8e-05, Sum P(3) = 3.8e-05
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 551 AGSAEIKEPLSHSSEMEPQPPSVELEESPAPSGE 584
A + + E + ++E+ P PP VE+ A + E
Sbjct: 252 AAAVAVVESMVTATEVAPPPPPVEVPIRKAKTKE 285
Score = 44 (20.5 bits), Expect = 3.8e-05, Sum P(3) = 3.8e-05
Identities = 11/44 (25%), Positives = 23/44 (52%)
Query: 58 GPPEVKKLKTYESRK-KRKRQEQSVVVKETEDKREEEVKSDVFD 100
G + KKL + +K K KR+E+ + +D +E + + + +
Sbjct: 134 GKKKKKKLGPKKEKKSKSKRKEEEEEEDDDDDSKEPKSSAQLLE 177
Score = 41 (19.5 bits), Expect = 0.00052, Sum P(4) = 0.00052
Identities = 9/30 (30%), Positives = 18/30 (60%)
Query: 68 YESRKKRKRQEQSVVVKETEDKREEEVKSD 97
Y KK+K++ K+++ KR+EE + +
Sbjct: 131 YTPGKKKKKKLGPKKEKKSKSKRKEEEEEE 160
Score = 41 (19.5 bits), Expect = 0.00054, Sum P(3) = 0.00054
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 63 KKLKTYESRKKRKRQEQSVVVKETEDKREE 92
KKL+T ++KK+K +E+ V E ++
Sbjct: 365 KKLRT--AKKKKKGEEEVTAVDGYETDHQD 392
Score = 38 (18.4 bits), Expect = 0.00099, Sum P(4) = 0.00099
Identities = 7/31 (22%), Positives = 17/31 (54%)
Query: 85 ETEDKREEEVKSDVFDVINERERPIREKESK 115
E ED EE++ + ++++P + ++ K
Sbjct: 55 ENEDDPEEDLSEAETPKLKKKKKPKKPRDPK 85
>UNIPROTKB|E2R0A1 [details] [associations]
symbol:SP110 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005730 "nucleolus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000770 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR019787
Pfam:PF01342 Pfam:PF03172 PROSITE:PS50016 PROSITE:PS50864
PROSITE:PS51414 SMART:SM00249 SMART:SM00258 SMART:SM00297
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:3.10.390.10 InterPro:IPR010919 SUPFAM:SSF63763
Gene3D:1.20.920.10 SUPFAM:SSF47370 GeneTree:ENSGT00510000046835
OMA:DGTSEMN EMBL:AAEX03014424 Ensembl:ENSCAFT00000016996
Uniprot:E2R0A1
Length = 682
Score = 139 (54.0 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 35/91 (38%), Positives = 44/91 (48%)
Query: 669 SPSQFEAHAGWASRRKPFQHIYTSNGVSLHELSIKLSLERPFSSKENDDLCGICMDGGDL 728
+P +FE A+ RK ++ G +L EL IK EN C +C GG L
Sbjct: 493 TPKEFEIEGKQANSRK-WKQTVRCKGKTLGEL-IKW---------ENFKECEVCCRGGPL 541
Query: 729 LCCDSCPRAFHIDCVSLPG-IPSGTWHCRYC 758
LCCD+CPRAFH DC P W C +C
Sbjct: 542 LCCDTCPRAFHEDCHIPPAEAERSPWSCTFC 572
Score = 43 (20.2 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 13/59 (22%), Positives = 29/59 (49%)
Query: 61 EVKKLKTYESRKKRKRQEQSVVVKETEDKREEEVKSDVFDVINERERPIR-EKESKDDS 118
E K T S+ + Q+ + +T + +E+ K D+ ++ I +K+S+D++
Sbjct: 393 ERKDDSTRSSKVMTRAQKAKIECVQTLEPKEKRRKEDISSSSTRDQKNIPLKKKSEDET 451
Score = 39 (18.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 51 VDSGCVLGPPEVKKLKTYESRKKRKRQEQSVVVKETEDKREE 92
VDS P E+++ + KK K++++S+ T KR +
Sbjct: 250 VDSPEPNDPKELQEASSTPPNKKGKKRKRSIW--STSKKRRQ 289
Score = 38 (18.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 63 KKLKTYESRKKRKRQEQSVVV-KETEDKREEEVKSDVFDVINERERPIREKES 114
K+ ++ S K++RQ +S+ K + R +E K V D +R+ +K +
Sbjct: 275 KRKRSIWSTSKKRRQTKSLPKGKASPGPRIQE-KLQVVDQTTQRKGDSTKKSN 326
>POMBASE|SPAC2F7.07c [details] [associations]
symbol:cph2 "Clr6 histone deacetylase associated PHD
protein-2 Cph2" species:4896 "Schizosaccharomyces pombe"
[GO:0005634 "nucleus" evidence=IDA] [GO:0005819 "spindle"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016575 "histone
deacetylation" evidence=ISO] [GO:0019787 "small conjugating protein
ligase activity" evidence=ISM] [GO:0032221 "Rpd3S complex"
evidence=IDA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 PomBase:SPAC2F7.07c EMBL:CU329670
GO:GO:0005819 GO:GO:0046872 GO:GO:0008270 GO:GO:0006338
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0019787
GO:GO:0016575 GO:GO:0032221 eggNOG:NOG145066 OrthoDB:EOG4TQQJV
PIR:T38555 RefSeq:NP_592978.1 ProteinModelPortal:Q09698
DIP:DIP-29347N STRING:Q09698 EnsemblFungi:SPAC2F7.07c.1
GeneID:2541422 KEGG:spo:SPAC2F7.07c NextBio:20802526 Uniprot:Q09698
Length = 607
Score = 130 (50.8 bits), Expect = 4.2e-05, Sum P(3) = 4.2e-05
Identities = 29/102 (28%), Positives = 51/102 (50%)
Query: 695 VSLHELSIKLSLERPFSSKENDDLCGICMDGGDLLCCDSCPRAFHIDCVSLP----GIPS 750
+S +EL + E P+ + N+D C C G+ LCC++CP +FH C+ P +P
Sbjct: 245 ISSNEL-LPTPEEYPY--RYNNDYCSACHGPGNFLCCETCPNSFHFTCIDPPIEEKNLPD 301
Query: 751 GTWHCRYCMNTF---QKEKFVEYNANARAAGRIEGVDPFAQM 789
W+C C + + ++ E +N + G + VD + Q+
Sbjct: 302 DAWYCNECKHHSLYNELDEQEELESNVKEEGTM--VDVWMQL 341
Score = 50 (22.7 bits), Expect = 4.2e-05, Sum P(3) = 4.2e-05
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 817 KSRFGRRTVILCDQCEREYHVGCL 840
KS ++++ CD C +H CL
Sbjct: 414 KSALVSQSILACDYCNSYWHPDCL 437
Score = 43 (20.2 bits), Expect = 4.2e-05, Sum P(3) = 4.2e-05
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 492 NVCKDSP-LETLEKAVRMVLGSSSMKKAN 519
N+ K++ L+T K + + SSSMKKAN
Sbjct: 158 NLLKENKSLKTTAKDLSDI-SSSSMKKAN 185
>UNIPROTKB|F1MMY4 [details] [associations]
symbol:WHSC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060348 "bone development" evidence=IEA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003290 "atrial septum secundum morphogenesis" evidence=IEA]
[GO:0003289 "atrial septum primum morphogenesis" evidence=IEA]
[GO:0003149 "membranous septum morphogenesis" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR009071 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855 Pfam:PF00505
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0031965
GO:GO:0003682 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0003289 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0060348 GO:GO:0018024
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 GO:GO:0003149 GO:GO:0003290 OMA:DVKRCVV
EMBL:DAAA02018575 IPI:IPI00714897 Ensembl:ENSBTAT00000010497
Uniprot:F1MMY4
Length = 1368
Score = 143 (55.4 bits), Expect = 5.2e-05, Sum P(3) = 5.2e-05
Identities = 23/44 (52%), Positives = 29/44 (65%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYC 758
N C +C GG LLCC+SCP AFH DC+S+ +P G+W C C
Sbjct: 833 NVSWCFVCSKGGSLLCCESCPAAFHPDCLSIE-MPDGSWFCNDC 875
Score = 49 (22.3 bits), Expect = 5.2e-05, Sum P(3) = 5.2e-05
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 825 VILCDQ--CEREYHVGCL 840
++LCD+ C + YH+ CL
Sbjct: 1254 LVLCDRKSCTKAYHLPCL 1271
Score = 42 (19.8 bits), Expect = 5.2e-05, Sum P(3) = 5.2e-05
Identities = 13/55 (23%), Positives = 27/55 (49%)
Query: 68 YESRKKRKRQEQSVVVKETEDKREEEVKSDVFDVINERERPIREKESKDDSENMG 122
Y++R+ RKR Q V E E + S + + +++ P++ + + S + G
Sbjct: 163 YKARRSRKRSAQRGPVLE-HGLGEAALASRLSSPV-DKKIPVKRESCPNSSRDKG 215
>TAIR|locus:2162509 [details] [associations]
symbol:AT5G22760 "AT5G22760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009630 "gravitropism" evidence=RCA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 Prosite:PS00018 EMBL:CP002688 GO:GO:0046872
GO:GO:0008270 InterPro:IPR018247 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR004022
InterPro:IPR018500 InterPro:IPR018501 Pfam:PF02791 SMART:SM00571
PROSITE:PS50827 IPI:IPI00532034 RefSeq:NP_197668.2 UniGene:At.43647
PRIDE:F4KBB1 EnsemblPlants:AT5G22760.1 GeneID:832339
KEGG:ath:AT5G22760 OMA:SHFPSIV Uniprot:F4KBB1
Length = 1566
Score = 138 (53.6 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 31/78 (39%), Positives = 40/78 (51%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLPG--IPSGTWHCRYCMNTFQKE-KFVEYN 771
N D C +C G LLCCD CP A+H C+ + IP G W+C C T +K V Y
Sbjct: 412 NSDECRLCGMDGTLLCCDGCPLAYHSRCIGVVKMYIPDGPWYCPEC--TIKKMGPTVVYK 469
Query: 772 ANARAAGRIEGVDPFAQM 789
+ R A GVDP ++
Sbjct: 470 TSLRGAVYF-GVDPHGRL 486
Score = 51 (23.0 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 9/31 (29%), Positives = 19/31 (61%)
Query: 824 TVILCDQCEREYHVGCLKDHGMEDLQVPQLL 854
T I C C+ YH+ +K +E+ ++P+++
Sbjct: 1257 TYIHCTSCDMWYHIEAVK---LEESKIPEVV 1284
>UNIPROTKB|E2QUJ0 [details] [associations]
symbol:WHSC1L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 OMA:MEKDIHK
EMBL:AAEX03010393 Ensembl:ENSCAFT00000009828 Uniprot:E2QUJ0
Length = 1438
Score = 123 (48.4 bits), Expect = 7.0e-05, Sum P(4) = 7.0e-05
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 722 CMDGGDLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYC 758
C GG LLCC+SCP +FH +C+S+ +P G W+C C
Sbjct: 917 CEKGGRLLCCESCPASFHPECLSIE-MPEGCWNCNDC 952
Score = 69 (29.3 bits), Expect = 7.0e-05, Sum P(4) = 7.0e-05
Identities = 22/89 (24%), Positives = 42/89 (47%)
Query: 9 EKFVVLSKIRVGLKREFEFALKVQSEICGSLGRTRARKVQSNVDSGCVLGPP-EVKKLKT 67
++FV +K G+ + E +++ Q + S R K N+ S GP V+K +
Sbjct: 520 DQFVYSTK---GIGNKTEISVRGQDRLIISTPNQRNEKATQNISSEATSGPTGSVEKKQQ 576
Query: 68 YESRKKRKRQEQSVVVKETEDKREEEVKS 96
S + R E+S V + ++E+V++
Sbjct: 577 RRSIRTRSESEKSTEVVPKKKIKKEQVET 605
Score = 48 (22.0 bits), Expect = 7.0e-05, Sum P(4) = 7.0e-05
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 814 DFCKSRFGRRTVILCDQ--CEREYHVGCL 840
D+C +++CD+ C + YH+ CL
Sbjct: 1323 DYCFQCGDGGELVMCDKKDCPKAYHLLCL 1351
Score = 37 (18.1 bits), Expect = 7.0e-05, Sum P(4) = 7.0e-05
Identities = 7/34 (20%), Positives = 14/34 (41%)
Query: 271 EVGLGKEYEPGRVQMEMDEEKKNDIERELVENGV 304
+VG GK+ + + D ++ L G+
Sbjct: 661 QVGFGKQVDSPSATADADVSDVQSVDSSLSRRGI 694
>UNIPROTKB|O96028 [details] [associations]
symbol:WHSC1 "Histone-lysine N-methyltransferase NSD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003149 "membranous
septum morphogenesis" evidence=IEA] [GO:0003289 "atrial septum
primum morphogenesis" evidence=IEA] [GO:0003290 "atrial septum
secundum morphogenesis" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0060348 "bone development" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0009653 "anatomical structure morphogenesis"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0031965 "nuclear membrane"
evidence=IDA] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR009071
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280
PROSITE:PS51215 SMART:SM00184 SMART:SM00249 SMART:SM00317
SMART:SM00570 Pfam:PF00855 Pfam:PF00505 GO:GO:0005737 GO:GO:0005694
GO:GO:0005730 EMBL:CH471131 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0031965 GO:GO:0006351 GO:GO:0003682
GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0003289 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0009653 GO:GO:0060348 eggNOG:COG2940
GO:GO:0018024 InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 EMBL:AL132868
GO:GO:0003149 GO:GO:0003290 Orphanet:280 KO:K11424 EMBL:AF071593
EMBL:AF071594 EMBL:AF083386 EMBL:AF083387 EMBL:AF083388
EMBL:AF083389 EMBL:AF083390 EMBL:AF083391 EMBL:AF178206
EMBL:AF178199 EMBL:AF178198 EMBL:AF178202 EMBL:AF178204
EMBL:AF178205 EMBL:AF178203 EMBL:AF178201 EMBL:AF178200
EMBL:AF178219 EMBL:AF178207 EMBL:AF178216 EMBL:AF178215
EMBL:AF178214 EMBL:AF178213 EMBL:AF178212 EMBL:AF178211
EMBL:AF178210 EMBL:AF178209 EMBL:AF178208 EMBL:AF178218
EMBL:AF178217 EMBL:AF330040 EMBL:AY694128 EMBL:AJ007042
EMBL:AB029013 EMBL:AK289697 EMBL:AC105448 EMBL:BC052254
EMBL:BC070176 EMBL:BC094825 EMBL:BC141815 EMBL:BC152412
IPI:IPI00107486 IPI:IPI00107487 IPI:IPI00218240 IPI:IPI00334604
IPI:IPI00470433 IPI:IPI00790144 IPI:IPI00792674
RefSeq:NP_001035889.1 RefSeq:NP_015627.1 RefSeq:NP_579877.1
RefSeq:NP_579878.1 RefSeq:NP_579889.1 RefSeq:NP_579890.1
UniGene:Hs.113876 HSSP:Q9BYU8 ProteinModelPortal:O96028 SMR:O96028
IntAct:O96028 MINT:MINT-7103764 STRING:O96028 PhosphoSite:O96028
PaxDb:O96028 PRIDE:O96028 DNASU:7468 Ensembl:ENST00000312087
Ensembl:ENST00000353275 Ensembl:ENST00000382888
Ensembl:ENST00000382891 Ensembl:ENST00000382892
Ensembl:ENST00000382895 Ensembl:ENST00000398261
Ensembl:ENST00000420906 Ensembl:ENST00000436793
Ensembl:ENST00000503128 Ensembl:ENST00000508803
Ensembl:ENST00000512700 Ensembl:ENST00000514045 GeneID:7468
KEGG:hsa:7468 UCSC:uc003gdx.3 UCSC:uc003gdy.1 UCSC:uc003gdz.4
UCSC:uc003geg.1 UCSC:uc003geh.1 UCSC:uc003gei.4 CTD:7468
GeneCards:GC04P001840 HGNC:HGNC:12766 HPA:HPA015315 HPA:HPA015801
MIM:602952 neXtProt:NX_O96028 PharmGKB:PA37369 HOVERGEN:HBG053345
InParanoid:O96028 OMA:DVKRCVV ChiTaRS:WHSC1 GenomeRNAi:7468
NextBio:29246 ArrayExpress:O96028 Bgee:O96028 Genevestigator:O96028
GermOnline:ENSG00000109685 Uniprot:O96028
Length = 1365
Score = 140 (54.3 bits), Expect = 7.2e-05, Sum P(4) = 7.2e-05
Identities = 22/44 (50%), Positives = 29/44 (65%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYC 758
N C +C GG LLCC+SCP AFH DC+++ +P G+W C C
Sbjct: 830 NVSWCFVCSKGGSLLCCESCPAAFHPDCLNIE-MPDGSWFCNDC 872
Score = 51 (23.0 bits), Expect = 7.2e-05, Sum P(4) = 7.2e-05
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 825 VILCDQ--CEREYHVGCL 840
++LCD+ C + YH+ CL
Sbjct: 1251 LVLCDRKFCTKAYHLSCL 1268
Score = 44 (20.5 bits), Expect = 7.2e-05, Sum P(4) = 7.2e-05
Identities = 10/26 (38%), Positives = 19/26 (73%)
Query: 291 KKNDIERE-LVENGVLESSMVGKHSS 315
+K I+ + L+E G++E+++V K SS
Sbjct: 169 RKRSIKYDSLLEQGLVEAALVSKISS 194
Score = 40 (19.1 bits), Expect = 7.2e-05, Sum P(4) = 7.2e-05
Identities = 14/59 (23%), Positives = 28/59 (47%)
Query: 526 VSFSNAGVEELMLLCKSCVELKESQAGSAEIKEPLSHSSEMEPQPPSVELEESPAPSGE 584
V+F G E LC+ + ++A ++ +P+S + + V+ EE+ + S E
Sbjct: 282 VAFEGEGQFEK--LCQESAKQAPTKAEKIKLLKPISGKLRAQWEMGIVQAEEAASMSVE 338
Score = 40 (19.1 bits), Expect = 7.2e-05, Sum P(4) = 7.2e-05
Identities = 20/80 (25%), Positives = 34/80 (42%)
Query: 483 NGKTLRDIMNVCKDSPLETLEKAVRMVLGSSSMKKANFCLNCRVSFSNAGVEELMLLCKS 542
+ +TL ++ K +P +T E R +GS +K R +A + L+ K
Sbjct: 408 SAETLESHPDIGKSTPQKTAEADPRRGVGSPPGRKKTTVSMPRSRKGDAASQFLVFCQKH 467
Query: 543 CVEL--KESQAGSAEIKEPL 560
E+ + A EI+E L
Sbjct: 468 RDEVVAEHPDASGEEIEELL 487
>UNIPROTKB|E1BNH7 [details] [associations]
symbol:WHSC1L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0018024 "histone-lysine N-methyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00570
Pfam:PF00855 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 OMA:MEKDIHK EMBL:DAAA02060851 EMBL:DAAA02060847
EMBL:DAAA02060848 EMBL:DAAA02060849 EMBL:DAAA02060850
IPI:IPI00924282 Ensembl:ENSBTAT00000061245 Uniprot:E1BNH7
Length = 1440
Score = 121 (47.7 bits), Expect = 7.2e-05, Sum P(4) = 7.2e-05
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 722 CMDGGDLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYC 758
C GG LLCC+SCP +FH +C+S+ P G W+C C
Sbjct: 919 CEKGGRLLCCESCPASFHPECLSIE-TPEGCWNCNDC 954
Score = 52 (23.4 bits), Expect = 7.2e-05, Sum P(4) = 7.2e-05
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 814 DFCKSRFGRRTVILCDQ--CEREYHVGCL 840
DFC +++CD+ C + YH+ CL
Sbjct: 1325 DFCFQCGDGGELVMCDRKDCSKAYHLLCL 1353
Score = 52 (23.4 bits), Expect = 7.2e-05, Sum P(4) = 7.2e-05
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 545 ELKESQAGSAEIKEPLSHSSEMEPQPPSVEL-EESPAPSG-ELTDTSNR 591
+ K++ AE+K+P S + QP E + +PSG E+ S R
Sbjct: 406 QAKKNVVSKAEVKKPRRPRSVLNVQPEQTNAGEAASSPSGTEMRRHSQR 454
Score = 52 (23.4 bits), Expect = 7.2e-05, Sum P(4) = 7.2e-05
Identities = 12/52 (23%), Positives = 29/52 (55%)
Query: 68 YESRKKRKRQEQSVVVKETEDKREEEV---KSDVFDVINERERPIREKESKD 116
+ESRK+++++ +E+++ ++ + + + NER P+ EK +D
Sbjct: 191 HESRKEKRKKSNKHDSSRSEERKSHKIPKLEPEEQNRPNERVDPVSEKPRED 242
Score = 50 (22.7 bits), Expect = 0.00090, Sum P(3) = 0.00090
Identities = 21/90 (23%), Positives = 41/90 (45%)
Query: 9 EKFVVLSKIRVGLKREFEFALKVQSEICGSLGRTRARKVQSNVDSG-CVLGPP-EVKKLK 66
++FV +K G+ + E +++ Q + S R K N+ S G V+K +
Sbjct: 521 DQFVYSTK---GIGNKTEISVRGQDRLIISTPNQRNEKATQNMSSPEATSGSAGSVEKKQ 577
Query: 67 TYESRKKRKRQEQSVVVKETEDKREEEVKS 96
S + R E+S V + ++E+V++
Sbjct: 578 QRRSIRTRSESEKSTEVVPKKKIKKEQVET 607
Score = 43 (20.2 bits), Expect = 0.00052, Sum P(4) = 0.00052
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 498 PLETLEKAVRMVLGSSSMKKAN---FCLNCRVSFSNAG 532
P ETL +A + V+ + +KK LN + +NAG
Sbjct: 400 PEETLSQAKKNVVSKAEVKKPRRPRSVLNVQPEQTNAG 437
>RGD|1311923 [details] [associations]
symbol:Chd3 "chromodomain helicase DNA binding protein 3"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005813 "centrosome" evidence=ISO]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISO]
[GO:0007051 "spindle organization" evidence=ISO] [GO:0016581 "NuRD
complex" evidence=ISO] [GO:0045111 "intermediate filament
cytoskeleton" evidence=ISO] [GO:0051297 "centrosome organization"
evidence=ISO] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326
IPI:IPI00369880 EMBL:AY903245 EMBL:AY903246 UniGene:Rn.232095
STRING:Q2KML1 UCSC:RGD:1311923 Genevestigator:Q2KML1 Uniprot:Q2KML1
Length = 1925
Score = 144 (55.7 bits), Expect = 9.3e-05, Sum P(4) = 9.3e-05
Identities = 25/51 (49%), Positives = 34/51 (66%)
Query: 713 KENDD---LCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
+E DD C +C DGG+LLCCD+C ++HI C++ LP IP+G W C C
Sbjct: 406 EEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRC 456
Score = 134 (52.2 bits), Expect = 8.5e-05, Sum P(5) = 8.5e-05
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 714 ENDDLCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
++ D C +C GG+++ CD+CPRA+H+ C+ L P G W C +C
Sbjct: 334 DHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHC 380
Score = 57 (25.1 bits), Expect = 8.5e-05, Sum P(5) = 8.5e-05
Identities = 21/74 (28%), Positives = 33/74 (44%)
Query: 58 GPPEVKKLKTYESRKKRKRQEQSVVVKETEDKREE-EVKSDVFDVI--NERERPIREK-E 113
GP + K+ K + RK++K + E ++ RE+ E + +R R REK E
Sbjct: 9 GPKKQKENKPGKPRKRKKLDSEEEFGSERDEYREKSESGGSEYGTGPGRKRRRKHREKRE 68
Query: 114 SKDDSENMGVGERG 127
K G G+ G
Sbjct: 69 KKTKRRKRGEGDGG 82
Score = 52 (23.4 bits), Expect = 8.5e-05, Sum P(5) = 8.5e-05
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 814 DFCKSRFGRRTVILCDQCEREYHVGCL 840
++C+ ++ CD C YH+ CL
Sbjct: 413 EYCRVCKDGGELLCCDACISSYHIHCL 439
Score = 42 (19.8 bits), Expect = 8.5e-05, Sum P(5) = 8.5e-05
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 571 PSVELEESPAPSGELTDTSNRSPEPNSAQ 599
P E EES SG + S R P A+
Sbjct: 274 PEPEAEESDLDSGSVHSASGRPDGPVRAK 302
Score = 37 (18.1 bits), Expect = 8.5e-05, Sum P(5) = 8.5e-05
Identities = 24/107 (22%), Positives = 39/107 (36%)
Query: 477 EYIYLENGKTLRDIMN--VCKDSPLETLEKAVRMVLGSSSMKKANFCLNCRVSFSNAGVE 534
+Y L N K M + K +P + K + +LG+ K F N S A V
Sbjct: 111 DYHTLTNYKAFSQFMRPLIAKKNPKIPMSKMMT-ILGA---KWREFSANNPFKGSAAAVA 166
Query: 535 ELMLLCKSCVELKESQAGSAEIKEPLSHSSEMEPQPPSVELEESPAP 581
+ V + ++ +S ++ + P P L PAP
Sbjct: 167 AAAAAAAAAV--------AEQVSAAVSSATPIAPSGPPPALPPPPAP 205
>UNIPROTKB|F6XUE7 [details] [associations]
symbol:SP140 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000770 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414 SMART:SM00249
SMART:SM00258 SMART:SM00297 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:3.10.390.10 InterPro:IPR010919
SUPFAM:SSF63763 Gene3D:1.20.920.10 SUPFAM:SSF47370 OMA:MCFSEEV
GeneTree:ENSGT00510000046835 Ensembl:ENSCAFT00000017034
EMBL:AAEX03014424 Uniprot:F6XUE7
Length = 551
Score = 130 (50.8 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 21/46 (45%), Positives = 28/46 (60%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLPGIPS--GTWHCRYC 758
N D C C DGG+L CCD+C R+FH DC +P + + W C +C
Sbjct: 374 NSDECETCRDGGELFCCDTCSRSFHEDC-HIPPVETERSPWSCTFC 418
>UNIPROTKB|H0Y4R8 [details] [associations]
symbol:SP100 "Nuclear autoantigen Sp-100" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR000770
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01342 PROSITE:PS50016
PROSITE:PS50864 SMART:SM00249 SMART:SM00258 SMART:SM00297
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:3.10.390.10
InterPro:IPR010919 SUPFAM:SSF63763 Gene3D:1.20.920.10
SUPFAM:SSF47370 EMBL:AC009949 EMBL:AC010149 HGNC:HGNC:11206
ChiTaRS:SP100 ProteinModelPortal:H0Y4R8 Ensembl:ENST00000431952
Uniprot:H0Y4R8
Length = 259
Score = 124 (48.7 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 38/126 (30%), Positives = 59/126 (46%)
Query: 653 YKKGF--GILCTCCNSE----VSPSQFEAHAGWASRRKPFQHIYTSNGVSLHELSIKLSL 706
YK+ F G C SE +P +FE G K ++ G +L L ++ L
Sbjct: 4 YKERFKQGTSKKCIQSEDKKWFTPREFEIE-GDRGASKNWKLSIRCGGYTLKVLMERI-L 61
Query: 707 ERPFSS-----KENDDLCGICMDGGDLLCCDSCPRAFHIDCVSLPGIPSGT--WHCRYC- 758
E ++ EN ++C +C G L CCD+CPR+FH C +P + + W C +C
Sbjct: 62 ESHNNTLVDPCPENSNICEVCNKWGRLFCCDTCPRSFHEHC-HIPSVEANKNPWSCIFCR 120
Query: 759 MNTFQK 764
+ T Q+
Sbjct: 121 IKTIQE 126
>MGI|MGI:1276574 [details] [associations]
symbol:Whsc1 "Wolf-Hirschhorn syndrome candidate 1 (human)"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0003149 "membranous septum morphogenesis" evidence=IMP]
[GO:0003289 "atrial septum primum morphogenesis" evidence=IMP]
[GO:0003290 "atrial septum secundum morphogenesis" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IDA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0018022 "peptidyl-lysine methylation" evidence=IDA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IDA]
[GO:0032259 "methylation" evidence=IEA] [GO:0034968 "histone lysine
methylation" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0060348 "bone development" evidence=IMP]
InterPro:IPR001841 Pfam:PF00856 InterPro:IPR009071
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280
PROSITE:PS51215 SMART:SM00184 SMART:SM00249 SMART:SM00317
SMART:SM00570 MGI:MGI:1276574 Pfam:PF00855 Pfam:PF00505
GO:GO:0005634 GO:GO:0005694 GO:GO:0005730 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0031965 GO:GO:0006351
GO:GO:0003682 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0003289 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0060348 eggNOG:COG2940
GO:GO:0018024 InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 GO:GO:0003149 GO:GO:0003290 KO:K11424
UniGene:Mm.332320 HSSP:Q9BYU8 CTD:7468 OMA:DVKRCVV ChiTaRS:WHSC1
EMBL:EU733655 EMBL:AK129287 EMBL:AC163329 EMBL:AK078622
EMBL:BC046473 EMBL:BC053454 IPI:IPI00107975 IPI:IPI00671804
IPI:IPI00762411 IPI:IPI00902751 RefSeq:NP_001074571.2
RefSeq:NP_780440.2 UniGene:Mm.19892 UniGene:Mm.490310
ProteinModelPortal:Q8BVE8 SMR:Q8BVE8 STRING:Q8BVE8
PhosphoSite:Q8BVE8 PaxDb:Q8BVE8 PRIDE:Q8BVE8
Ensembl:ENSMUST00000058096 Ensembl:ENSMUST00000066854
Ensembl:ENSMUST00000075812 GeneID:107823 KEGG:mmu:107823
UCSC:uc008xbm.2 UCSC:uc012duw.1 HOGENOM:HOG000230893
HOVERGEN:HBG079979 NextBio:359529 Bgee:Q8BVE8 CleanEx:MM_WHSC1
Genevestigator:Q8BVE8 GermOnline:ENSMUSG00000057406 Uniprot:Q8BVE8
Length = 1365
Score = 137 (53.3 bits), Expect = 9.3e-05, Sum P(4) = 9.3e-05
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYC 758
N C +C GG LLCC++CP AFH DC+++ +P G+W C C
Sbjct: 830 NVSWCFVCSKGGSLLCCEACPAAFHPDCLNIE-MPDGSWFCNDC 872
Score = 51 (23.0 bits), Expect = 9.3e-05, Sum P(4) = 9.3e-05
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 825 VILCDQ--CEREYHVGCL 840
++LCD+ C + YH+ CL
Sbjct: 1251 LVLCDRKFCTKAYHLSCL 1268
Score = 44 (20.5 bits), Expect = 9.3e-05, Sum P(4) = 9.3e-05
Identities = 10/26 (38%), Positives = 19/26 (73%)
Query: 291 KKNDIERE-LVENGVLESSMVGKHSS 315
+K I+ + L+E G++E+++V K SS
Sbjct: 169 RKRSIKYDSLLEQGLVEAALVSKISS 194
Score = 42 (19.8 bits), Expect = 9.3e-05, Sum P(4) = 9.3e-05
Identities = 12/53 (22%), Positives = 26/53 (49%)
Query: 532 GVEELMLLCKSCVELKESQAGSAEIKEPLSHSSEMEPQPPSVELEESPAPSGE 584
G E+ LC+ + ++A ++ +P+S + + V+ EE+ + S E
Sbjct: 286 GEEQFEKLCQESAKQAPTKAEKIKLLKPISGRLRAQWEMGIVQAEEAASMSIE 338
Score = 37 (18.1 bits), Expect = 0.00043, Sum P(4) = 0.00043
Identities = 15/69 (21%), Positives = 29/69 (42%)
Query: 259 RVAMDVEEVKCEEVGLGKEYEPGRVQMEMDEEKKNDIERELVENGVLESSMVGKHSSTLC 318
++ + +EVK G+G ++ E K + + + ESS+ G ++ +
Sbjct: 97 KLCFEAQEVK----GIGTPPNTTPIKNGSPEIKLKITKTYMNGKPLFESSICGDGAADVS 152
Query: 319 NGESNVAKS 327
E N KS
Sbjct: 153 QSEENEQKS 161
>UNIPROTKB|E2QZB0 [details] [associations]
symbol:SP140 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000770 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414 SMART:SM00249
SMART:SM00258 SMART:SM00297 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:3.10.390.10 InterPro:IPR010919
SUPFAM:SSF63763 Gene3D:1.20.920.10 SUPFAM:SSF47370
Ensembl:ENSCAFT00000017034 Uniprot:E2QZB0
Length = 728
Score = 131 (51.2 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 711 SSKENDDLCGICMDGGDLLCCDSCPRAFHIDCVSLPGIPS--GTWHCRYC 758
S+ N D C C DGG+L CCD+C R+FH DC +P + + W C +C
Sbjct: 547 SNLGNSDECETCRDGGELFCCDTCSRSFHEDC-HIPPVETERSPWSCTFC 595
>UNIPROTKB|F1LPP7 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 IPI:IPI00369880
Ensembl:ENSRNOT00000057060 Uniprot:F1LPP7
Length = 2020
Score = 144 (55.7 bits), Expect = 0.00011, Sum P(4) = 0.00011
Identities = 25/51 (49%), Positives = 34/51 (66%)
Query: 713 KENDD---LCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
+E DD C +C DGG+LLCCD+C ++HI C++ LP IP+G W C C
Sbjct: 501 EEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRC 551
Score = 134 (52.2 bits), Expect = 0.00011, Sum P(5) = 0.00011
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 714 ENDDLCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
++ D C +C GG+++ CD+CPRA+H+ C+ L P G W C +C
Sbjct: 429 DHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHC 475
Score = 57 (25.1 bits), Expect = 0.00011, Sum P(5) = 0.00011
Identities = 21/74 (28%), Positives = 33/74 (44%)
Query: 58 GPPEVKKLKTYESRKKRKRQEQSVVVKETEDKREE-EVKSDVFDVI--NERERPIREK-E 113
GP + K+ K + RK++K + E ++ RE+ E + +R R REK E
Sbjct: 104 GPKKQKENKPGKPRKRKKLDSEEEFGSERDEYREKSESGGSEYGTGPGRKRRRKHREKRE 163
Query: 114 SKDDSENMGVGERG 127
K G G+ G
Sbjct: 164 KKTKRRKRGEGDGG 177
Score = 52 (23.4 bits), Expect = 0.00011, Sum P(5) = 0.00011
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 814 DFCKSRFGRRTVILCDQCEREYHVGCL 840
++C+ ++ CD C YH+ CL
Sbjct: 508 EYCRVCKDGGELLCCDACISSYHIHCL 534
Score = 52 (23.4 bits), Expect = 0.00031, Sum P(5) = 0.00031
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 72 KKRKRQEQSVVVKETEDKREEEVKSDVFDVINERERPIREKESKDDSENMGVG 124
+ + +E+ +VV E E++ EEE + +V E + E +D+ +G G
Sbjct: 2 RDEEEEEEEMVVSEEEEEEEEEGDEEEEEV----EAADEDDEEEDEEGVLGRG 50
Score = 42 (19.8 bits), Expect = 0.00011, Sum P(5) = 0.00011
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 571 PSVELEESPAPSGELTDTSNRSPEPNSAQ 599
P E EES SG + S R P A+
Sbjct: 369 PEPEAEESDLDSGSVHSASGRPDGPVRAK 397
Score = 37 (18.1 bits), Expect = 0.00011, Sum P(5) = 0.00011
Identities = 24/107 (22%), Positives = 39/107 (36%)
Query: 477 EYIYLENGKTLRDIMN--VCKDSPLETLEKAVRMVLGSSSMKKANFCLNCRVSFSNAGVE 534
+Y L N K M + K +P + K + +LG+ K F N S A V
Sbjct: 206 DYHTLTNYKAFSQFMRPLIAKKNPKIPMSKMMT-ILGA---KWREFSANNPFKGSAAAVA 261
Query: 535 ELMLLCKSCVELKESQAGSAEIKEPLSHSSEMEPQPPSVELEESPAP 581
+ V + ++ +S ++ + P P L PAP
Sbjct: 262 AAAAAAAAAV--------AEQVSAAVSSATPIAPSGPPPALPPPPAP 300
>UNIPROTKB|F1M7Q0 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR
IPI:IPI00959834 Ensembl:ENSRNOT00000012983 Uniprot:F1M7Q0
Length = 2054
Score = 144 (55.7 bits), Expect = 0.00012, Sum P(4) = 0.00012
Identities = 25/51 (49%), Positives = 34/51 (66%)
Query: 713 KENDD---LCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
+E DD C +C DGG+LLCCD+C ++HI C++ LP IP+G W C C
Sbjct: 501 EEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRC 551
Score = 134 (52.2 bits), Expect = 0.00012, Sum P(5) = 0.00012
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 714 ENDDLCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
++ D C +C GG+++ CD+CPRA+H+ C+ L P G W C +C
Sbjct: 429 DHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHC 475
Score = 57 (25.1 bits), Expect = 0.00012, Sum P(5) = 0.00012
Identities = 21/74 (28%), Positives = 33/74 (44%)
Query: 58 GPPEVKKLKTYESRKKRKRQEQSVVVKETEDKREE-EVKSDVFDVI--NERERPIREK-E 113
GP + K+ K + RK++K + E ++ RE+ E + +R R REK E
Sbjct: 104 GPKKQKENKPGKPRKRKKLDSEEEFGSERDEYREKSESGGSEYGTGPGRKRRRKHREKRE 163
Query: 114 SKDDSENMGVGERG 127
K G G+ G
Sbjct: 164 KKTKRRKRGEGDGG 177
Score = 52 (23.4 bits), Expect = 0.00012, Sum P(5) = 0.00012
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 814 DFCKSRFGRRTVILCDQCEREYHVGCL 840
++C+ ++ CD C YH+ CL
Sbjct: 508 EYCRVCKDGGELLCCDACISSYHIHCL 534
Score = 52 (23.4 bits), Expect = 0.00034, Sum P(5) = 0.00034
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 72 KKRKRQEQSVVVKETEDKREEEVKSDVFDVINERERPIREKESKDDSENMGVG 124
+ + +E+ +VV E E++ EEE + +V E + E +D+ +G G
Sbjct: 2 RDEEEEEEEMVVSEEEEEEEEEGDEEEEEV----EAADEDDEEEDEEGVLGRG 50
Score = 42 (19.8 bits), Expect = 0.00012, Sum P(5) = 0.00012
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 571 PSVELEESPAPSGELTDTSNRSPEPNSAQ 599
P E EES SG + S R P A+
Sbjct: 369 PEPEAEESDLDSGSVHSASGRPDGPVRAK 397
Score = 37 (18.1 bits), Expect = 0.00012, Sum P(5) = 0.00012
Identities = 24/107 (22%), Positives = 39/107 (36%)
Query: 477 EYIYLENGKTLRDIMN--VCKDSPLETLEKAVRMVLGSSSMKKANFCLNCRVSFSNAGVE 534
+Y L N K M + K +P + K + +LG+ K F N S A V
Sbjct: 206 DYHTLTNYKAFSQFMRPLIAKKNPKIPMSKMMT-ILGA---KWREFSANNPFKGSAAAVA 261
Query: 535 ELMLLCKSCVELKESQAGSAEIKEPLSHSSEMEPQPPSVELEESPAP 581
+ V + ++ +S ++ + P P L PAP
Sbjct: 262 AAAAAAAAAV--------AEQVSAAVSSATPIAPSGPPPALPPPPAP 300
>UNIPROTKB|H7C0U2 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
EMBL:CH471077 GO:GO:0046872 GO:GO:0008270 GO:GO:0016301
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR000313
PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666 UniGene:Hs.446240
UniGene:Hs.658553 UniGene:Hs.668465 HGNC:HGNC:9397
InterPro:IPR021931 Pfam:PF12064 EMBL:AL390212 SMR:H7C0U2
Ensembl:ENST00000446994 Uniprot:H7C0U2
Length = 1105
Score = 132 (51.5 bits), Expect = 0.00013, P = 0.00013
Identities = 22/51 (43%), Positives = 28/51 (54%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYC-MNTFQK 764
ND C +C G +LCC+ CPR +H C+ L P G W C C + FQK
Sbjct: 62 NDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPECETDAFQK 112
>UNIPROTKB|F1M5S0 [details] [associations]
symbol:RGD1560612 "Protein RGD1560612" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GeneTree:ENSGT00530000063984 IPI:IPI00947688
Ensembl:ENSRNOT00000066219 ArrayExpress:F1M5S0 Uniprot:F1M5S0
Length = 573
Score = 136 (52.9 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 704 LSLERPFSSKEN--DDLCGICMDGGDLLCCDSCPRAFHIDCVSLP--GIPSGTWHCRYCM 759
+SL P S+ + +D C +C G LL CD+C R +H+DC+ P IP G W C C
Sbjct: 368 VSLPSPTSTDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLEPPLKTIPKGMWICPRCQ 427
Query: 760 NTFQKEK 766
+ K++
Sbjct: 428 DQMLKKE 434
Score = 39 (18.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 427 SKVKGPGVSGLRGVVKGS 444
SKV GPG ++ V K +
Sbjct: 142 SKVTGPGAEAVQIVAKNT 159
>UNIPROTKB|F1S3C1 [details] [associations]
symbol:NSD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050681 "androgen receptor binding" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0001702
"gastrulation with mouth forming second" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 GO:GO:0005634
GO:GO:0045893 GO:GO:0046872 GO:GO:0008270 GO:GO:0003682
GO:GO:0001702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0003712 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 OMA:NIDKMRH
EMBL:CU915382 Ensembl:ENSSSCT00000015341 Uniprot:F1S3C1
Length = 2394
Score = 148 (57.2 bits), Expect = 0.00014, Sum P(4) = 0.00014
Identities = 23/44 (52%), Positives = 30/44 (68%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYC 758
N C +C +GG LLCCDSCP AFH +C+++ IP G W+C C
Sbjct: 1403 NVSWCFVCSEGGSLLCCDSCPAAFHRECLNID-IPEGNWYCNDC 1445
Score = 51 (23.0 bits), Expect = 0.00014, Sum P(4) = 0.00014
Identities = 44/161 (27%), Positives = 64/161 (39%)
Query: 512 SSSMKKANFCLNCRVSFSNAGVEELMLLC-KSCVELKESQAGSAEIKEPLSHSS----EM 566
SS ++ + CR S N VEE L+ K + E +A E PL+ S
Sbjct: 1004 SSRCEEESLLARCRSSAQNKQVEENSLISTKEEPPVLEREAPFLE--GPLAQSEVGGGHA 1061
Query: 567 E-PQ---PPSVELEESPAPSGELTDTSNRSPE--PNSAQTXXXXXXXXXXXXXXXXITRK 620
E PQ V LE SP P+ E + ++P + Q + +K
Sbjct: 1062 ELPQLTLSVPVALEVSPRPALESEELLVKTPGNYESKRQRKPTKKLLESNDLDPGFMPKK 1121
Query: 621 -DLRMHKLVFEEGGLE-DGAEVGYFVRGEKF--LVGYKKGF 657
DL + K +E G LE D E R ++F ++G K F
Sbjct: 1122 GDLGLPKKCYEAGHLENDITESCATSRSKEFAGVIGATKLF 1162
Score = 46 (21.3 bits), Expect = 0.00014, Sum P(4) = 0.00014
Identities = 19/74 (25%), Positives = 34/74 (45%)
Query: 40 GRTRARKVQSNVDSGCVLGPPEVKKLKTYESRKKRKRQEQSVVVKETEDKREEEVK-SDV 98
GR++ K++ + +G V + K ++ +KRK V E +RE E + S+
Sbjct: 713 GRSKPSKLRDGFSAQ--VGRNTVNR-KALKTERKRKLNRLPAVTLEAALQRERESRGSEN 769
Query: 99 FDVINERERPIREK 112
E E P +E+
Sbjct: 770 GSSRGEAESPGKEE 783
Score = 37 (18.1 bits), Expect = 0.00014, Sum P(4) = 0.00014
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 814 DFCKSRFGRRTVILCDQ--CEREYHVGCL 840
D C S ++ C + C + YH CL
Sbjct: 1816 DECFSCGDAGQLVSCKKPGCPKVYHADCL 1844
>TAIR|locus:2163961 [details] [associations]
symbol:AT5G63900 "AT5G63900" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008080
"N-acetyltransferase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000182
InterPro:IPR001965 InterPro:IPR019787 PROSITE:PS50016
PROSITE:PS51186 SMART:SM00184 SMART:SM00249 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.40.630.30 InterPro:IPR016181 SUPFAM:SSF55729 EMBL:AB007646
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0008080 HSSP:Q14839 EMBL:AB493810
IPI:IPI00518981 RefSeq:NP_201195.1 UniGene:At.55695
ProteinModelPortal:Q9FMZ9 SMR:Q9FMZ9 EnsemblPlants:AT5G63900.1
GeneID:836510 KEGG:ath:AT5G63900 TAIR:At5g63900 eggNOG:NOG244493
HOGENOM:HOG000152567 InParanoid:Q9FMZ9 OMA:NSKLMAC PhylomeDB:Q9FMZ9
ProtClustDB:CLSN2914816 Genevestigator:Q9FMZ9 Uniprot:Q9FMZ9
Length = 557
Score = 128 (50.1 bits), Expect = 0.00014, P = 0.00014
Identities = 28/79 (35%), Positives = 36/79 (45%)
Query: 681 SRRKPFQHIYTSNGVSLHELSIKLSLERPFSSKENDDLCGICMDGGDLLCCDSCPRAFHI 740
S +K Q + + HE + S N D+C +C GGDLL CD CP AFH
Sbjct: 221 SLKKVLQVMEKKQQKNKHEKESLRFCRKDCSPDMNCDVCCVCHWGGDLLLCDGCPSAFHH 280
Query: 741 DCVSLPGIPS-GTWHCRYC 758
C+ L +P W C C
Sbjct: 281 ACLGLSSLPEEDLWFCPCC 299
>UNIPROTKB|F1MS13 [details] [associations]
symbol:PHF21A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0001967
"suckling behavior" evidence=IEA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00628 Pfam:PF02178
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 SMART:SM00384
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0001967
GO:GO:0003682 GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0000118 OMA:SCTVNCN
GeneTree:ENSGT00530000063984 EMBL:DAAA02041566 EMBL:DAAA02041567
IPI:IPI00716921 Ensembl:ENSBTAT00000012652 Uniprot:F1MS13
Length = 631
Score = 136 (52.9 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 704 LSLERPFSSKEN--DDLCGICMDGGDLLCCDSCPRAFHIDCVSLP--GIPSGTWHCRYCM 759
+SL P S+ + +D C +C G LL CD+C R +H+DC+ P IP G W C C
Sbjct: 422 VSLPSPTSTDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQ 481
Query: 760 NTFQKEK 766
+ K++
Sbjct: 482 DQMLKKE 488
Score = 39 (18.8 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 427 SKVKGPGVSGLRGVVKGS 444
SKV GPG ++ V K +
Sbjct: 131 SKVTGPGAEAVQIVAKNT 148
>RGD|1560612 [details] [associations]
symbol:Phf21a "PHD finger protein 21A" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA;ISO] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0001967
"suckling behavior" evidence=IEA;ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00628 Pfam:PF02178
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 SMART:SM00384
RGD:1560612 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
GeneTree:ENSGT00530000063984 IPI:IPI00952132
Ensembl:ENSRNOT00000067664 UCSC:RGD:1560612 ArrayExpress:F1M6K4
Uniprot:F1M6K4
Length = 639
Score = 136 (52.9 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 704 LSLERPFSSKEN--DDLCGICMDGGDLLCCDSCPRAFHIDCVSLP--GIPSGTWHCRYCM 759
+SL P S+ + +D C +C G LL CD+C R +H+DC+ P IP G W C C
Sbjct: 434 VSLPSPTSTDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLEPPLKTIPKGMWICPRCQ 493
Query: 760 NTFQKEK 766
+ K++
Sbjct: 494 DQMLKKE 500
Score = 39 (18.8 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 427 SKVKGPGVSGLRGVVKGS 444
SKV GPG ++ V K +
Sbjct: 143 SKVTGPGAEAVQIVAKNT 160
>MGI|MGI:2384756 [details] [associations]
symbol:Phf21a "PHD finger protein 21A" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0001967 "suckling
behavior" evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR017956 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02178 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 SMART:SM00384 MGI:MGI:2384756 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0001967 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 CTD:51317
eggNOG:NOG310379 HOVERGEN:HBG080293 EMBL:AB105178 EMBL:AK129424
EMBL:AK037174 EMBL:BC019181 EMBL:AY206982 IPI:IPI00124469
IPI:IPI00228265 IPI:IPI00453806 IPI:IPI00742280 IPI:IPI00742299
IPI:IPI00742330 IPI:IPI00742344 IPI:IPI00742352 IPI:IPI00742439
RefSeq:NP_001103161.1 RefSeq:NP_620094.2 UniGene:Mm.330408
ProteinModelPortal:Q6ZPK0 SMR:Q6ZPK0 STRING:Q6ZPK0
PhosphoSite:Q6ZPK0 PRIDE:Q6ZPK0 GeneID:192285 KEGG:mmu:192285
UCSC:uc008kxi.2 HOGENOM:HOG000231466 ChiTaRS:PHF21A NextBio:371282
CleanEx:MM_PHF21A Genevestigator:Q6ZPK0
GermOnline:ENSMUSG00000058318 Uniprot:Q6ZPK0
Length = 659
Score = 136 (52.9 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 704 LSLERPFSSKEN--DDLCGICMDGGDLLCCDSCPRAFHIDCVSLP--GIPSGTWHCRYCM 759
+SL P S+ + +D C +C G LL CD+C R +H+DC+ P IP G W C C
Sbjct: 454 VSLPSPTSTDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLEPPLKTIPKGMWICPRCQ 513
Query: 760 NTFQKEK 766
+ K++
Sbjct: 514 DQMLKKE 520
Score = 39 (18.8 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 427 SKVKGPGVSGLRGVVKGS 444
SKV GPG ++ V K +
Sbjct: 192 SKVTGPGAEAVQIVAKNT 209
>UNIPROTKB|E9PTL0 [details] [associations]
symbol:Zmynd8 "Protein Zmynd8" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
IPI:IPI00769023 Ensembl:ENSRNOT00000055139 RGD:1309544
ArrayExpress:E9PTL0 Uniprot:E9PTL0
Length = 1073
Score = 130 (50.8 bits), Expect = 0.00021, P = 0.00021
Identities = 41/135 (30%), Positives = 63/135 (46%)
Query: 680 ASRRKPFQHIYTSNGVSLHELS---IKLSLERP----FSSKE----NDDLCGICMDGGDL 728
A +RK ++SNG S + S IK ++P SSK+ ND C +C G +
Sbjct: 17 AQKRKVPSPPHSSNGHSPQDSSTSPIKKK-KKPGLLNSSSKDQDGRNDFYCWVCHREGQV 75
Query: 729 LCCDSCPRAFHIDCVSLPGIPSGTWHCRYCMNTFQKEKFVEYNANARAAGRIEGVDPFAQ 788
LCC+ CPR +H C+ L P G W C C E +E + A IE + +
Sbjct: 76 LCCELCPRVYHAKCLRLTSEPEGDWFCPECEKITVAE-CIETQSKAMTMLTIEQL---SY 131
Query: 789 MVSRCIRIVQTPDTE 803
++ I+ ++ P T+
Sbjct: 132 LLKFAIQKMKQPGTD 146
>UNIPROTKB|F1PQV6 [details] [associations]
symbol:PHF21A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR017956 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02178 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 SMART:SM00384 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 OMA:SCTVNCN GeneTree:ENSGT00530000063984
EMBL:AAEX03011503 EMBL:AAEX03011502 Ensembl:ENSCAFT00000014853
Uniprot:F1PQV6
Length = 680
Score = 136 (52.9 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 704 LSLERPFSSKEN--DDLCGICMDGGDLLCCDSCPRAFHIDCVSLP--GIPSGTWHCRYCM 759
+SL P S+ + +D C +C G LL CD+C R +H+DC+ P IP G W C C
Sbjct: 474 VSLPSPTSTDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQ 533
Query: 760 NTFQKEK 766
+ K++
Sbjct: 534 DQMLKKE 540
Score = 39 (18.8 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 427 SKVKGPGVSGLRGVVKGS 444
SKV GPG ++ V K +
Sbjct: 183 SKVTGPGAEAVQIVAKNT 200
>UNIPROTKB|F8W6B8 [details] [associations]
symbol:SP140 "Nuclear body protein SP140" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000770 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR004865 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01342 Pfam:PF03172 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50864 PROSITE:PS51414 SMART:SM00249 SMART:SM00258
SMART:SM00297 GO:GO:0005737 GO:GO:0005730 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:3.10.390.10 InterPro:IPR010919
SUPFAM:SSF63763 Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:AC009949
EMBL:AC009950 HGNC:HGNC:17133 ChiTaRS:SP140 IPI:IPI01025902
ProteinModelPortal:F8W6B8 SMR:F8W6B8 PRIDE:F8W6B8
Ensembl:ENST00000350136 ArrayExpress:F8W6B8 Bgee:F8W6B8
Uniprot:F8W6B8
Length = 736
Score = 127 (49.8 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 22/45 (48%), Positives = 27/45 (60%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLPGIPSGT-WHCRYC 758
N D C +C DGG+L CCD+C R FH DC P T W+C +C
Sbjct: 558 NLDECEVCRDGGELFCCDTCSRVFHEDCHIPPVEAERTPWNCIFC 602
Score = 49 (22.3 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 15/48 (31%), Positives = 21/48 (43%)
Query: 540 CKSCVELKESQAGSAEIKEPLSHSSEMEPQPPSVELEESPAPSGELTD 587
C + +E Q S+ + S SSE+E P + E E S L D
Sbjct: 261 CSEMCDGEERQEASSSLARRGSVSSELENHPMNEEGESEELASSLLYD 308
>UNIPROTKB|F5GY84 [details] [associations]
symbol:SP140 "Nuclear body protein SP140" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000770 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR004865 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01342 Pfam:PF03172 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50864 PROSITE:PS51414 SMART:SM00249 SMART:SM00258
SMART:SM00297 GO:GO:0005737 GO:GO:0005730 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:3.10.390.10 InterPro:IPR010919
SUPFAM:SSF63763 Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:AC009949
EMBL:AC009950 HGNC:HGNC:17133 ChiTaRS:SP140 IPI:IPI00908574
ProteinModelPortal:F5GY84 SMR:F5GY84 Ensembl:ENST00000486687
ArrayExpress:F5GY84 Bgee:F5GY84 Uniprot:F5GY84
Length = 768
Score = 127 (49.8 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 22/45 (48%), Positives = 27/45 (60%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLPGIPSGT-WHCRYC 758
N D C +C DGG+L CCD+C R FH DC P T W+C +C
Sbjct: 613 NLDECEVCRDGGELFCCDTCSRVFHEDCHIPPVEAERTPWNCIFC 657
Score = 49 (22.3 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 15/48 (31%), Positives = 21/48 (43%)
Query: 540 CKSCVELKESQAGSAEIKEPLSHSSEMEPQPPSVELEESPAPSGELTD 587
C + +E Q S+ + S SSE+E P + E E S L D
Sbjct: 316 CSEMCDGEERQEASSSLARRGSVSSELENHPMNEEGESEELASSLLYD 363
>WB|WBGene00008081 [details] [associations]
symbol:athp-1 species:6239 "Caenorhabditis elegans"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR000253 InterPro:IPR001965 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016
SMART:SM00240 SMART:SM00249 SMART:SM00384 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000003 Gene3D:2.60.200.20
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 eggNOG:NOG145066
EMBL:Z73424 HSSP:Q13263 PIR:T19918 RefSeq:NP_499397.2
ProteinModelPortal:Q18605 SMR:Q18605 DIP:DIP-27259N IntAct:Q18605
MINT:MINT-1045880 STRING:Q18605 PaxDb:Q18605 EnsemblMetazoa:C44B9.4
GeneID:176517 KEGG:cel:CELE_C44B9.4 UCSC:C44B9.4 CTD:176517
WormBase:C44B9.4 GeneTree:ENSGT00530000069671 HOGENOM:HOG000021274
InParanoid:Q18605 OMA:IAIQRCL NextBio:892916 Uniprot:Q18605
Length = 1150
Score = 129 (50.5 bits), Expect = 0.00029, P = 0.00029
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 718 LCGICMDGGDLLCCDSCPRAFHIDCVSLPG--IPSGTWHCRYCMN 760
+CGIC GG++LCC+ CP +FH+ C+ +P ++C C N
Sbjct: 61 ICGICSSGGNILCCEQCPASFHLACIGYESSDLPDDNFYCNRCRN 105
>UNIPROTKB|Q18605 [details] [associations]
symbol:athp-1 "Protein ATHP-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000253 InterPro:IPR001965 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016
SMART:SM00240 SMART:SM00249 SMART:SM00384 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000003 Gene3D:2.60.200.20
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 eggNOG:NOG145066
EMBL:Z73424 HSSP:Q13263 PIR:T19918 RefSeq:NP_499397.2
ProteinModelPortal:Q18605 SMR:Q18605 DIP:DIP-27259N IntAct:Q18605
MINT:MINT-1045880 STRING:Q18605 PaxDb:Q18605 EnsemblMetazoa:C44B9.4
GeneID:176517 KEGG:cel:CELE_C44B9.4 UCSC:C44B9.4 CTD:176517
WormBase:C44B9.4 GeneTree:ENSGT00530000069671 HOGENOM:HOG000021274
InParanoid:Q18605 OMA:IAIQRCL NextBio:892916 Uniprot:Q18605
Length = 1150
Score = 129 (50.5 bits), Expect = 0.00029, P = 0.00029
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 718 LCGICMDGGDLLCCDSCPRAFHIDCVSLPG--IPSGTWHCRYCMN 760
+CGIC GG++LCC+ CP +FH+ C+ +P ++C C N
Sbjct: 61 ICGICSSGGNILCCEQCPASFHLACIGYESSDLPDDNFYCNRCRN 105
>UNIPROTKB|E9PFJ6 [details] [associations]
symbol:SP140 "Nuclear body protein SP140" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000770 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR004865 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01342 Pfam:PF03172 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50864 PROSITE:PS51414 SMART:SM00249 SMART:SM00258
SMART:SM00297 GO:GO:0005737 GO:GO:0005730 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:3.10.390.10 InterPro:IPR010919
SUPFAM:SSF63763 Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:AC009949
EMBL:AC009950 HGNC:HGNC:17133 ChiTaRS:SP140 IPI:IPI00784584
ProteinModelPortal:E9PFJ6 SMR:E9PFJ6 PRIDE:E9PFJ6
Ensembl:ENST00000343805 UCSC:uc002vqm.3 ArrayExpress:E9PFJ6
Bgee:E9PFJ6 Uniprot:E9PFJ6
Length = 807
Score = 127 (49.8 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 22/45 (48%), Positives = 27/45 (60%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLPGIPSGT-WHCRYC 758
N D C +C DGG+L CCD+C R FH DC P T W+C +C
Sbjct: 629 NLDECEVCRDGGELFCCDTCSRVFHEDCHIPPVEAERTPWNCIFC 673
Score = 49 (22.3 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 15/48 (31%), Positives = 21/48 (43%)
Query: 540 CKSCVELKESQAGSAEIKEPLSHSSEMEPQPPSVELEESPAPSGELTD 587
C + +E Q S+ + S SSE+E P + E E S L D
Sbjct: 332 CSEMCDGEERQEASSSLARRGSVSSELENHPMNEEGESEELASSLLYD 379
>UNIPROTKB|E7ESH9 [details] [associations]
symbol:SP140 "Nuclear body protein SP140" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000770 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR004865 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01342 Pfam:PF03172 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50864 PROSITE:PS51414 SMART:SM00249 SMART:SM00258
SMART:SM00297 GO:GO:0005737 GO:GO:0005730 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:3.10.390.10 InterPro:IPR010919
SUPFAM:SSF63763 Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:AC009949
EMBL:AC009950 HGNC:HGNC:17133 ChiTaRS:SP140 IPI:IPI01025902
ProteinModelPortal:E7ESH9 SMR:E7ESH9 Ensembl:ENST00000417495
ArrayExpress:E7ESH9 Bgee:E7ESH9 Uniprot:E7ESH9
Length = 753
Score = 127 (49.8 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 22/45 (48%), Positives = 27/45 (60%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLPGIPSGT-WHCRYC 758
N D C +C DGG+L CCD+C R FH DC P T W+C +C
Sbjct: 575 NLDECEVCRDGGELFCCDTCSRVFHEDCHIPPVEAERTPWNCIFC 619
Score = 48 (22.0 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 15/48 (31%), Positives = 21/48 (43%)
Query: 540 CKSCVELKESQAGSAEIKEPLSHSSEMEPQPPSVELEESPAPSGELTD 587
C + +E Q S+ + S SSE+E P + E E S L D
Sbjct: 278 CSEMCDGEEPQEASSSLARCGSVSSELENHPMNEEGESEELASSLLYD 325
Score = 43 (20.2 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 23/93 (24%), Positives = 34/93 (36%)
Query: 433 GVSGLRGVVK-GSGISCFCDDCKGNQVVTPAVFELHAGSSNKRPPEYIYLENGKTLRDIM 491
GV G+ K GI C + + TP FE+ G + + G LR +M
Sbjct: 482 GVKGILHKKKLQQGILVKCIQTEDGKWFTPTEFEIKGGHARSKNWRLSVRCGGWPLRWLM 541
Query: 492 N--VCKDSPLETLEKAVRMVLGSSSMKKANFCL 522
D P K R +L S + + C+
Sbjct: 542 ENGFLPDPPRIRYRKKKR-ILKSQNNSSVDPCM 573
>UNIPROTKB|Q13342 [details] [associations]
symbol:SP140 "Nuclear body protein SP140" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0005635
"nuclear envelope" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006952 "defense response" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR000770 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414 SMART:SM00249
SMART:SM00258 SMART:SM00297 GO:GO:0005737 GO:GO:0005635
GO:GO:0005654 GO:GO:0006952 GO:GO:0005730 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:3.10.390.10
InterPro:IPR010919 SUPFAM:SSF63763 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 OrthoDB:EOG44QT09 EMBL:AC009949
eggNOG:NOG300534 HOGENOM:HOG000089984 EMBL:U36499 EMBL:U36500
EMBL:U63420 EMBL:AC009950 EMBL:BC070160 IPI:IPI00012793
IPI:IPI00219535 IPI:IPI00219536 IPI:IPI00431685 PIR:G02099
RefSeq:NP_001005176.1 RefSeq:NP_009168.4 UniGene:Hs.632549
ProteinModelPortal:Q13342 SMR:Q13342 IntAct:Q13342 STRING:Q13342
PhosphoSite:Q13342 DMDM:218511671 PRIDE:Q13342
Ensembl:ENST00000373645 Ensembl:ENST00000392045 GeneID:11262
KEGG:hsa:11262 UCSC:uc002vql.3 UCSC:uc002vqn.3 CTD:11262
GeneCards:GC02P231090 HGNC:HGNC:17133 HPA:HPA006162 MIM:608602
neXtProt:NX_Q13342 PharmGKB:PA38205 HOVERGEN:HBG006294
InParanoid:Q13342 OMA:MCFSEEV ChiTaRS:SP140 GenomeRNAi:11262
NextBio:42859 ArrayExpress:Q13342 Bgee:Q13342 CleanEx:HS_SP140
Genevestigator:Q13342 GermOnline:ENSG00000079263 Uniprot:Q13342
Length = 867
Score = 127 (49.8 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 22/45 (48%), Positives = 27/45 (60%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLPGIPSGT-WHCRYC 758
N D C +C DGG+L CCD+C R FH DC P T W+C +C
Sbjct: 689 NLDECEVCRDGGELFCCDTCSRVFHEDCHIPPVEAERTPWNCIFC 733
Score = 49 (22.3 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 15/48 (31%), Positives = 21/48 (43%)
Query: 540 CKSCVELKESQAGSAEIKEPLSHSSEMEPQPPSVELEESPAPSGELTD 587
C + +E Q S+ + S SSE+E P + E E S L D
Sbjct: 392 CSEMCDGEERQEASSSLARRGSVSSELENHPMNEEGESEELASSLLYD 439
>UNIPROTKB|F1SSZ2 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:FP102454 Ensembl:ENSSSCT00000019561 Uniprot:F1SSZ2
Length = 1667
Score = 152 (58.6 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 25/51 (49%), Positives = 35/51 (68%)
Query: 713 KENDD---LCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
+E DD C +C DGG+LLCCD+CP ++H+ C++ LP IP+G W C C
Sbjct: 326 EEEDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRC 376
Score = 39 (18.8 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 7/30 (23%), Positives = 18/30 (60%)
Query: 68 YESRKKRKRQEQSVVVKETEDKREEEVKSD 97
Y KK+K++ + K+ + K++++ + D
Sbjct: 9 YSPNKKKKKKLKDKKEKKAKRKKKDDDEDD 38
Score = 37 (18.1 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 12/22 (54%), Positives = 14/22 (63%)
Query: 424 IRGSKVK-GPGVSGLRGVVKGS 444
IR +K K G G G+R VKGS
Sbjct: 155 IRKAKTKEGKG-PGVRKKVKGS 175
>UNIPROTKB|D5LMF5 [details] [associations]
symbol:zmynd8 "Zinc finger and MYND domain containing
protein 8" species:8355 "Xenopus laevis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0007399 "nervous system development"
evidence=IMP] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR002893 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01753 PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50865 SMART:SM00249 SMART:SM00297
Pfam:PF00855 GO:GO:0005634 GO:GO:0007399 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0001106 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 CTD:23613 InterPro:IPR021931
Pfam:PF12064 EMBL:GU942747 RefSeq:NP_001170911.1 UniGene:Xl.18946
GeneID:733267 KEGG:xla:733267 Xenbase:XB-GENE-6253445
Uniprot:D5LMF5
Length = 1165
Score = 128 (50.1 bits), Expect = 0.00037, P = 0.00037
Identities = 27/89 (30%), Positives = 42/89 (47%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYCMNTFQKEKFVEYNANA 774
ND C +C G +LCC+ CPR +H C+ L P G W C C E +E + A
Sbjct: 127 NDFYCWVCHREGQVLCCELCPRVYHAKCLKLTAEPEGDWFCPECEKITVAE-CIETQSKA 185
Query: 775 RAAGRIEGVDPFAQMVSRCIRIVQTPDTE 803
IE + + ++ ++ ++ P TE
Sbjct: 186 MTMLTIEQL---SYLLKFALQKMKQPGTE 211
>UNIPROTKB|F1RIM3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:FP102454 Ensembl:ENSSSCT00000003736 Uniprot:F1RIM3
Length = 1723
Score = 152 (58.6 bits), Expect = 0.00039, Sum P(3) = 0.00039
Identities = 25/51 (49%), Positives = 35/51 (68%)
Query: 713 KENDD---LCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYC 758
+E DD C +C DGG+LLCCD+CP ++H+ C++ LP IP+G W C C
Sbjct: 342 EEEDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRC 392
Score = 39 (18.8 bits), Expect = 0.00039, Sum P(3) = 0.00039
Identities = 7/30 (23%), Positives = 18/30 (60%)
Query: 68 YESRKKRKRQEQSVVVKETEDKREEEVKSD 97
Y KK+K++ + K+ + K++++ + D
Sbjct: 25 YSPNKKKKKKLKDKKEKKAKRKKKDDDEDD 54
Score = 37 (18.1 bits), Expect = 0.00039, Sum P(3) = 0.00039
Identities = 12/22 (54%), Positives = 14/22 (63%)
Query: 424 IRGSKVK-GPGVSGLRGVVKGS 444
IR +K K G G G+R VKGS
Sbjct: 171 IRKAKTKEGKG-PGVRKKVKGS 191
>UNIPROTKB|E2R3Q9 [details] [associations]
symbol:NSD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 CTD:64324
KO:K15588 OMA:NIDKMRH EMBL:AAEX03002967 EMBL:AAEX03002968
EMBL:AAEX03002969 EMBL:AAEX03002970 RefSeq:XP_865778.1
Ensembl:ENSCAFT00000026110 GeneID:489094 KEGG:cfa:489094
Uniprot:E2R3Q9
Length = 2698
Score = 148 (57.2 bits), Expect = 0.00042, Sum P(4) = 0.00042
Identities = 23/44 (52%), Positives = 30/44 (68%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYC 758
N C +C +GG LLCCDSCP AFH +C+++ IP G W+C C
Sbjct: 1707 NVSWCFVCSEGGSLLCCDSCPAAFHRECLNID-IPEGNWYCNDC 1749
Score = 49 (22.3 bits), Expect = 0.00042, Sum P(4) = 0.00042
Identities = 13/54 (24%), Positives = 25/54 (46%)
Query: 286 EMDEEKKNDIERELVENGVLESSMVGKHSSTLCNGESNVAKSVAVD-GNDEGKT 338
+ D + + D E+ + E+ +E ++ +CN E V V GN++ T
Sbjct: 161 DADVDSEMDPEQPVTEDESIEEIFEETQTNAICNYEPKSENGVDVAMGNEQDST 214
Score = 45 (20.9 bits), Expect = 0.00042, Sum P(4) = 0.00042
Identities = 35/140 (25%), Positives = 56/140 (40%)
Query: 512 SSSMKKANFCLNCRVSFSNAGVEELMLLC-KSCVELKESQAGSAEIKEPLSHS------S 564
SS ++ + CR S N V+E L+ K + E +A E PL+ S +
Sbjct: 1313 SSRCEEESLLARCRSSAQNKQVDENSLISTKEEPPVLEREAPFLE--GPLAQSELGGGHA 1370
Query: 565 EMEPQPPSVEL--EESPAPSGELTDTSNRSPE--PNSAQTXXXXXXXXXXXXXXXXITRK 620
E+ SV + E SP P E + ++P + Q + +K
Sbjct: 1371 ELPQLTLSVPVAPEVSPRPILESEELLVKTPGNYESKRQRKPTKKLLESNDLDPGFMPKK 1430
Query: 621 -DLRMHKLVFEEGGLEDGAE 639
DL + K +E G LE+ +E
Sbjct: 1431 GDLGLSKKCYEAGHLENDSE 1450
Score = 37 (18.1 bits), Expect = 0.00042, Sum P(4) = 0.00042
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 814 DFCKSRFGRRTVILCDQ--CEREYHVGCL 840
D C S ++ C + C + YH CL
Sbjct: 2120 DECFSCGDAGQLVSCKKPGCPKVYHADCL 2148
>ZFIN|ZDB-GENE-030131-2199 [details] [associations]
symbol:prkcbp1l "protein kinase C binding protein
1, like" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR002893 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01753 PRINTS:PR00503
PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865
SMART:SM00249 SMART:SM00297 Pfam:PF00855 ZFIN:ZDB-GENE-030131-2199
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
GeneTree:ENSGT00530000063428 EMBL:BX324190 IPI:IPI00611878
Ensembl:ENSDART00000124510 ArrayExpress:F1QYK7 Bgee:F1QYK7
Uniprot:F1QYK7
Length = 1131
Score = 127 (49.8 bits), Expect = 0.00046, P = 0.00046
Identities = 26/89 (29%), Positives = 42/89 (47%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYCMNTFQKEKFVEYNANA 774
ND C +C G +LCC+ CPR +H C+ L P G W C C E +E + A
Sbjct: 107 NDFYCWVCHREGQVLCCELCPRVYHAKCLKLAAEPEGDWFCPECEKITVAE-CIETQSKA 165
Query: 775 RAAGRIEGVDPFAQMVSRCIRIVQTPDTE 803
+E + + ++ ++ ++ P TE
Sbjct: 166 MTMLNLEQL---SYLLKFALQKMKQPGTE 191
>UNIPROTKB|F1SBF4 [details] [associations]
symbol:ZMYND8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
GeneTree:ENSGT00530000063428 OMA:VDNIRRK EMBL:CU607040
Ensembl:ENSSSCT00000008158 Uniprot:F1SBF4
Length = 931
Score = 126 (49.4 bits), Expect = 0.00047, P = 0.00047
Identities = 27/89 (30%), Positives = 42/89 (47%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYCMNTFQKEKFVEYNANA 774
ND C +C G +LCC+ CPR +H C+ L P G W C C E +E + A
Sbjct: 62 NDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPECEKITVAE-CIETQSKA 120
Query: 775 RAAGRIEGVDPFAQMVSRCIRIVQTPDTE 803
IE + + ++ I+ ++ P T+
Sbjct: 121 MTMLTIEQL---SYLLKFAIQKMKQPGTD 146
>UNIPROTKB|H0YEK2 [details] [associations]
symbol:PHF21A "PHD finger protein 21A" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 EMBL:AC068385
HGNC:HGNC:24156 EMBL:AC024475 EMBL:AC129913 Ensembl:ENST00000530587
Bgee:H0YEK2 Uniprot:H0YEK2
Length = 116
Score = 99 (39.9 bits), Expect = 0.00047, P = 0.00047
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 728 LLCCDSCPRAFHIDCVSLP--GIPSGTWHCRYCMNTFQKEK 766
LL CD+C R +H+DC+ P IP G W C C + K++
Sbjct: 1 LLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQMLKKE 41
>UNIPROTKB|Q9H930 [details] [associations]
symbol:SP140L "Nuclear body protein SP140-like protein"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000770 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414 SMART:SM00249
SMART:SM00258 SMART:SM00297 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:3.10.390.10 InterPro:IPR010919
SUPFAM:SSF63763 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
HSSP:O43918 OrthoDB:EOG44QT09 EMBL:AC009949 EMBL:BC004921
EMBL:BC105007 EMBL:BQ690359 EMBL:AK023116 IPI:IPI00027693
IPI:IPI00719187 IPI:IPI00884908 IPI:IPI01009049 RefSeq:NP_612411.4
UniGene:Hs.589661 ProteinModelPortal:Q9H930 SMR:Q9H930
STRING:Q9H930 PhosphoSite:Q9H930 DMDM:182705269 PRIDE:Q9H930
Ensembl:ENST00000243810 Ensembl:ENST00000415673
Ensembl:ENST00000444636 Ensembl:ENST00000458341 GeneID:93349
KEGG:hsa:93349 UCSC:uc010fxm.1 UCSC:uc010fxn.2 UCSC:uc010fxo.1
CTD:93349 GeneCards:GC02P231191 HGNC:HGNC:25105 neXtProt:NX_Q9H930
PharmGKB:PA164726206 eggNOG:NOG300534 HOGENOM:HOG000089984
OMA:QETNGNS GenomeRNAi:93349 NextBio:78053 Bgee:Q9H930
CleanEx:HS_SP140L Genevestigator:Q9H930 Uniprot:Q9H930
Length = 580
Score = 130 (50.8 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLPGIPSGT--WHCRYC 758
N D C +C DGG+L CCD+C R FH DC +P + S W+C +C
Sbjct: 402 NLDECEVCRDGGELFCCDTCSRVFHEDC-HIPPVESEKTPWNCIFC 446
Score = 40 (19.1 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 288 DEEKKNDIERELVENGVLESSMVGKHSSTLC 318
+ E++ DI+ L + V ES K S C
Sbjct: 161 EREERPDIKLSLKQGEVPESPEARKESDQAC 191
>UNIPROTKB|H7C4X9 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR002893 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01753 PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50865 SMART:SM00249 SMART:SM00297
Pfam:PF00855 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 InterPro:IPR000313 PROSITE:PS50812 EMBL:AL049540
EMBL:AL031666 HGNC:HGNC:9397 InterPro:IPR021931 Pfam:PF12064
EMBL:AL390212 ProteinModelPortal:H7C4X9 PRIDE:H7C4X9
Ensembl:ENST00000467200 Uniprot:H7C4X9
Length = 1096
Score = 126 (49.4 bits), Expect = 0.00057, P = 0.00057
Identities = 27/89 (30%), Positives = 42/89 (47%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYCMNTFQKEKFVEYNANA 774
ND C +C G +LCC+ CPR +H C+ L P G W C C E +E + A
Sbjct: 14 NDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPECEKITVAE-CIETQSKA 72
Query: 775 RAAGRIEGVDPFAQMVSRCIRIVQTPDTE 803
IE + + ++ I+ ++ P T+
Sbjct: 73 MTMLTIEQL---SYLLKFAIQKMKQPGTD 98
>RGD|1306355 [details] [associations]
symbol:Sp140 "SP140 nuclear body protein" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR000770 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR019787
Pfam:PF00439 Pfam:PF01342 Pfam:PF03172 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414 SMART:SM00249
SMART:SM00258 SMART:SM00297 RGD:1306355 GO:GO:0005737 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:3.10.390.10
InterPro:IPR010919 SUPFAM:SSF63763 Gene3D:1.20.920.10
SUPFAM:SSF47370 OrthoDB:EOG44QT09 eggNOG:NOG300534
HOGENOM:HOG000089984 CTD:11262 HOVERGEN:HBG006294
GeneTree:ENSGT00510000046835 EMBL:BC081971 IPI:IPI00471815
RefSeq:NP_001012133.1 UniGene:Rn.27561 SMR:Q66H87
Ensembl:ENSRNOT00000034603 GeneID:316580 KEGG:rno:316580
UCSC:RGD:1306355 InParanoid:Q66H87 NextBio:671042
Genevestigator:Q66H87 Uniprot:Q66H87
Length = 721
Score = 131 (51.2 bits), Expect = 0.00061, Sum P(3) = 0.00061
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 714 ENDDLCGICMDGGDLLCCDSCPRAFHIDCVSLPGIPSGT--WHCRYC 758
+N D C +C DGG L CCD+C RAFH +C +P + + W C +C
Sbjct: 543 DNSDECEVCRDGGTLFCCDTCSRAFHEEC-HIPAVEAEVTPWSCIFC 588
Score = 46 (21.3 bits), Expect = 0.00061, Sum P(3) = 0.00061
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 445 GISCFCDDCKGNQVVTPAVFELHAGSSNKR 474
GIS C+ VTP FE+ G +
Sbjct: 466 GISVMSIQCQDGNWVTPPEFEIMGGHGRSK 495
Score = 37 (18.1 bits), Expect = 0.00061, Sum P(3) = 0.00061
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 156 VEEEKKNECDEVLMNV 171
+ E+K EC E N+
Sbjct: 59 ISEQKYQECQETCKNL 74
>UNIPROTKB|F1LWS6 [details] [associations]
symbol:F1LWS6 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR004022
InterPro:IPR018500 InterPro:IPR018501 Pfam:PF02791 SMART:SM00571
PROSITE:PS50827 IPI:IPI00209838 Ensembl:ENSRNOT00000020980
ArrayExpress:F1LWS6 Uniprot:F1LWS6
Length = 822
Score = 125 (49.1 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 716 DDLCGICMDGGDLLCCDSCPRAFHIDCVSLP--GIPSGTWHCRYCM 759
DD C +C GDLLCC++C +H++CV P +P W C C+
Sbjct: 281 DDHCRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCV 326
Score = 48 (22.0 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 85 ETEDKREEEVKSDVFDVINERERPIREKESKDDSENM 121
E+ED EEE D E + E + +D +NM
Sbjct: 20 ESEDDDEEEDMVSEEDEEEEEDGDAEETQDSEDDKNM 56
>UNIPROTKB|J3KPU3 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR002893 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01753 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666
HGNC:HGNC:9397 InterPro:IPR021931 Pfam:PF12064 EMBL:AL390212
ProteinModelPortal:J3KPU3 Ensembl:ENST00000396281 Uniprot:J3KPU3
Length = 1186
Score = 126 (49.4 bits), Expect = 0.00062, P = 0.00062
Identities = 27/89 (30%), Positives = 42/89 (47%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYCMNTFQKEKFVEYNANA 774
ND C +C G +LCC+ CPR +H C+ L P G W C C E +E + A
Sbjct: 87 NDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPECEKITVAE-CIETQSKA 145
Query: 775 RAAGRIEGVDPFAQMVSRCIRIVQTPDTE 803
IE + + ++ I+ ++ P T+
Sbjct: 146 MTMLTIEQL---SYLLKFAIQKMKQPGTD 171
>UNIPROTKB|Q9ULU4 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISS] [GO:0070491 "repressing
transcription factor binding" evidence=ISS] [GO:0001106 "RNA
polymerase II transcription corepressor activity" evidence=ISS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISS] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR002893 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01753 PROSITE:PS01360
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865 SMART:SM00249
SMART:SM00297 EMBL:U48251 Pfam:PF00855 GO:GO:0005634 EMBL:CH471077
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0001106 Gene3D:1.20.920.10 SUPFAM:SSF47370
eggNOG:COG5076 InterPro:IPR000313 PROSITE:PS50812 GO:GO:0070491
EMBL:AL049540 EMBL:AL022342 EMBL:AF233453 EMBL:AF454056
EMBL:AF273045 EMBL:DQ082998 EMBL:DQ082999 EMBL:DQ368673
EMBL:DQ368674 EMBL:DQ368679 EMBL:DQ368669 EMBL:DQ368670
EMBL:DQ368671 EMBL:AB032951 EMBL:AK299899 EMBL:BX641005
EMBL:AL031666 EMBL:BC030721 IPI:IPI00385321 IPI:IPI00418316
IPI:IPI00640598 IPI:IPI00718938 IPI:IPI00719508 IPI:IPI00741204
IPI:IPI00789719 IPI:IPI00941061 IPI:IPI00946867 IPI:IPI01008745
IPI:IPI01008942 IPI:IPI01008945 IPI:IPI01008959 IPI:IPI01014325
RefSeq:NP_036540.3 RefSeq:NP_898868.1 RefSeq:NP_898869.1
UniGene:Hs.446240 UniGene:Hs.658553 UniGene:Hs.668465
ProteinModelPortal:Q9ULU4 SMR:Q9ULU4 IntAct:Q9ULU4
MINT:MINT-1183677 STRING:Q9ULU4 PhosphoSite:Q9ULU4 DMDM:25453223
PaxDb:Q9ULU4 PRIDE:Q9ULU4 Ensembl:ENST00000311275
Ensembl:ENST00000352431 Ensembl:ENST00000355972
Ensembl:ENST00000360911 Ensembl:ENST00000461685 GeneID:23613
KEGG:hsa:23613 UCSC:uc002xsu.1 UCSC:uc002xsw.1 UCSC:uc002xsx.1
UCSC:uc002xta.1 UCSC:uc002xtb.1 UCSC:uc002xtc.1 UCSC:uc002xtd.1
UCSC:uc002xte.1 UCSC:uc002xtf.1 UCSC:uc010zya.1 CTD:23613
GeneCards:GC20M045837 H-InvDB:HIX0015888 HGNC:HGNC:9397
HPA:HPA020949 neXtProt:NX_Q9ULU4 PharmGKB:PA162409890
HOVERGEN:HBG031823 GenomeRNAi:23613 NextBio:46322
ArrayExpress:Q9ULU4 Bgee:Q9ULU4 CleanEx:HS_ZMYND8
Genevestigator:Q9ULU4 GermOnline:ENSG00000101040 InterPro:IPR021931
Pfam:PF12064 Uniprot:Q9ULU4
Length = 1186
Score = 126 (49.4 bits), Expect = 0.00062, P = 0.00062
Identities = 27/89 (30%), Positives = 42/89 (47%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYCMNTFQKEKFVEYNANA 774
ND C +C G +LCC+ CPR +H C+ L P G W C C E +E + A
Sbjct: 87 NDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPECEKITVAE-CIETQSKA 145
Query: 775 RAAGRIEGVDPFAQMVSRCIRIVQTPDTE 803
IE + + ++ I+ ++ P T+
Sbjct: 146 MTMLTIEQL---SYLLKFAIQKMKQPGTD 171
>UNIPROTKB|F1RZJ3 [details] [associations]
symbol:WHSC1L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0018024 "histone-lysine N-methyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00570
Pfam:PF00855 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 OMA:MEKDIHK EMBL:CU570721 Ensembl:ENSSSCT00000017228
Uniprot:F1RZJ3
Length = 1437
Score = 123 (48.4 bits), Expect = 0.00062, Sum P(4) = 0.00062
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 722 CMDGGDLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYC 758
C GG LLCC+SCP +FH +C+S+ +P G W+C C
Sbjct: 917 CEKGGRLLCCESCPASFHPECLSIE-MPEGCWNCNDC 952
Score = 58 (25.5 bits), Expect = 0.00062, Sum P(4) = 0.00062
Identities = 22/90 (24%), Positives = 42/90 (46%)
Query: 9 EKFVVLSKIRVGLKREFEFALKVQSEICGSLGRTRARKVQSNVDSG-CVLGPP-EVKKLK 66
++FV +K G+ + E +++ Q + S R K N+ S GP V+K +
Sbjct: 519 DQFVYSTK---GIGNKTEISVRGQDRLIISTPNQRNEKATQNMSSPEATSGPTGSVEKKQ 575
Query: 67 TYESRKKRKRQEQSVVVKETEDKREEEVKS 96
S + R E+S V + ++E+V++
Sbjct: 576 QRRSIRTRSESEKSTEVVPKKKIKKEQVET 605
Score = 48 (22.0 bits), Expect = 0.00062, Sum P(4) = 0.00062
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 814 DFCKSRFGRRTVILCDQ--CEREYHVGCL 840
D+C +++CD+ C + YH+ CL
Sbjct: 1322 DYCFQCGDGGELVMCDRKDCPKAYHLLCL 1350
Score = 38 (18.4 bits), Expect = 0.00062, Sum P(4) = 0.00062
Identities = 8/34 (23%), Positives = 14/34 (41%)
Query: 271 EVGLGKEYEPGRVQMEMDEEKKNDIERELVENGV 304
+VG GK+ + + D I+ L G+
Sbjct: 661 QVGFGKQVDSPSATADADVSDVQSIDSSLSRRGI 694
>UNIPROTKB|F1NME8 [details] [associations]
symbol:Gga.29865 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
GeneTree:ENSGT00530000063428 OMA:VDNIRRK EMBL:AADN02019301
IPI:IPI00581329 Ensembl:ENSGALT00000007232 Uniprot:F1NME8
Length = 1197
Score = 126 (49.4 bits), Expect = 0.00063, P = 0.00063
Identities = 19/44 (43%), Positives = 24/44 (54%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYC 758
ND C +C G +LCC+ CPR +H C+ L P G W C C
Sbjct: 105 NDFYCWVCHREGQVLCCELCPRVYHAKCLKLTAEPEGDWFCPEC 148
>ZFIN|ZDB-GENE-041119-1 [details] [associations]
symbol:zmynd8 "zinc finger, MYND-type containing 8"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
ZFIN:ZDB-GENE-041119-1 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR000313
PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
GeneTree:ENSGT00530000063428 EMBL:BX296530 IPI:IPI00512740
Ensembl:ENSDART00000040235 Bgee:E7FBQ3 Uniprot:E7FBQ3
Length = 1201
Score = 126 (49.4 bits), Expect = 0.00063, P = 0.00063
Identities = 19/44 (43%), Positives = 24/44 (54%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYC 758
ND C +C G +LCC+ CPR +H C+ L P G W C C
Sbjct: 108 NDFYCWVCHREGQVLCCELCPRVYHAKCLKLAAEPEGDWFCPEC 151
>UNIPROTKB|F1M0S9 [details] [associations]
symbol:Zmynd8 "Protein Zmynd8" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865
SMART:SM00249 SMART:SM00297 Pfam:PF00855 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
RGD:1309544 IPI:IPI00949507 Ensembl:ENSRNOT00000065165
ArrayExpress:F1M0S9 Uniprot:F1M0S9
Length = 1226
Score = 126 (49.4 bits), Expect = 0.00065, P = 0.00065
Identities = 27/89 (30%), Positives = 42/89 (47%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYCMNTFQKEKFVEYNANA 774
ND C +C G +LCC+ CPR +H C+ L P G W C C E +E + A
Sbjct: 84 NDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPECEKITVAE-CIETQSKA 142
Query: 775 RAAGRIEGVDPFAQMVSRCIRIVQTPDTE 803
IE + + ++ I+ ++ P T+
Sbjct: 143 MTMLTIEQL---SYLLKFAIQKMKQPGTD 168
>UNIPROTKB|E1BM66 [details] [associations]
symbol:NSD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050681 "androgen receptor binding" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0001702
"gastrulation with mouth forming second" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] Pfam:PF00856
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280
PROSITE:PS51215 SMART:SM00249 SMART:SM00317 SMART:SM00570
Pfam:PF00855 GO:GO:0005634 GO:GO:0045893 GO:GO:0046872
GO:GO:0008270 GO:GO:0003682 GO:GO:0001702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0003712
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 OMA:NIDKMRH EMBL:DAAA02020051 EMBL:DAAA02020048
EMBL:DAAA02020049 EMBL:DAAA02020050 IPI:IPI00716946
Ensembl:ENSBTAT00000034204 Uniprot:E1BM66
Length = 2698
Score = 148 (57.2 bits), Expect = 0.00065, Sum P(3) = 0.00065
Identities = 23/44 (52%), Positives = 30/44 (68%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYC 758
N C +C +GG LLCCDSCP AFH +C+++ IP G W+C C
Sbjct: 1709 NVSWCFVCSEGGSLLCCDSCPAAFHRECLNID-IPEGNWYCNDC 1751
Score = 47 (21.6 bits), Expect = 0.00065, Sum P(3) = 0.00065
Identities = 14/57 (24%), Positives = 30/57 (52%)
Query: 60 PEVKKLKTYES-RKKRKR-QEQSVVVKETEDKREEEVKSDVFDVINERERPIREKES 114
P+ K+ KT E K R +E+S++ + + ++V + + + E P+ E+E+
Sbjct: 1297 PKKKQKKTQEQVHKVSSRCEEESLLARCRSSAQNKQVDENSL-ISTKEEPPVLEREA 1352
Score = 47 (21.6 bits), Expect = 0.00065, Sum P(3) = 0.00065
Identities = 23/86 (26%), Positives = 40/86 (46%)
Query: 37 GSLGRTR----ARKVQSNVDSGCVLGPPEVKKL-----KTYESRKKRKRQEQSVVVKETE 87
G LG T+ A ++++++ C P K+ K ++ +KRKRQ + T
Sbjct: 1430 GDLGLTKKCYEAGHLENDINESCAA--PRSKEFGGGTTKLFDKPRKRKRQRHA-----TA 1482
Query: 88 DKREEEVKSDVFDVINERERPIREKE 113
++VK+D I+ +E P E E
Sbjct: 1483 KLHCKKVKND----ISSKETPNSEGE 1504
Score = 37 (18.1 bits), Expect = 0.00065, Sum P(3) = 0.00065
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 814 DFCKSRFGRRTVILCDQ--CEREYHVGCL 840
D C S ++ C + C + YH CL
Sbjct: 2122 DECFSCGDAGQLVSCKKPGCPKVYHADCL 2150
>UNIPROTKB|F5H0X3 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR002893 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01753 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666
IPI:IPI00418316 HGNC:HGNC:9397 InterPro:IPR021931 Pfam:PF12064
EMBL:AL390212 ProteinModelPortal:F5H0X3 SMR:F5H0X3 PRIDE:F5H0X3
Ensembl:ENST00000536340 UCSC:uc010zxy.1 OMA:VDNIRRK
ArrayExpress:F5H0X3 Bgee:F5H0X3 Uniprot:F5H0X3
Length = 1241
Score = 126 (49.4 bits), Expect = 0.00066, P = 0.00066
Identities = 27/89 (30%), Positives = 42/89 (47%)
Query: 715 NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYCMNTFQKEKFVEYNANA 774
ND C +C G +LCC+ CPR +H C+ L P G W C C E +E + A
Sbjct: 114 NDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPECEKITVAE-CIETQSKA 172
Query: 775 RAAGRIEGVDPFAQMVSRCIRIVQTPDTE 803
IE + + ++ I+ ++ P T+
Sbjct: 173 MTMLTIEQL---SYLLKFAIQKMKQPGTD 198
>FB|FBgn0033015 [details] [associations]
symbol:d4 "d4" species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=NAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0007517 "muscle
organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 EMBL:AE013599 GO:GO:0046872 GO:GO:0008270
GO:GO:0048813 GO:GO:0007517 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR025750 Pfam:PF14051
GeneTree:ENSGT00530000063194 HSSP:Q14839 KO:K13196 UniGene:Dm.487
GeneID:35485 KEGG:dme:Dmel_CG2682 CTD:35485 FlyBase:FBgn0033015
GenomeRNAi:35485 NextBio:793658 EMBL:AY058600 EMBL:AF427473
RefSeq:NP_610163.1 SMR:Q7K3G5 DIP:DIP-18634N IntAct:Q7K3G5
STRING:Q7K3G5 EnsemblMetazoa:FBtr0086082 UCSC:CG2682-RA
InParanoid:Q7K3G5 OMA:SYDKTSS Uniprot:Q7K3G5
Length = 497
Score = 121 (47.7 bits), Expect = 0.00070, P = 0.00070
Identities = 24/53 (45%), Positives = 30/53 (56%)
Query: 719 CGIC--MDGGD-LLCCDSCPRAFHIDCVSLPGI--PSGTWHCRYCMNTFQKEK 766
C IC D D LL CD C R +H+ C+S P + P G+W C+ CM F K K
Sbjct: 445 CSICGTSDNDDQLLFCDDCDRGYHMYCLSPPLVTPPEGSWSCKLCMEEFHKIK 497
>UNIPROTKB|Q96BD5 [details] [associations]
symbol:PHF21A "PHD finger protein 21A" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0001967 "suckling behavior"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IDA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007596 "blood coagulation" evidence=TAS] Reactome:REACT_604
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 Pfam:PF02178 PROSITE:PS50016
SMART:SM00184 SMART:SM00249 SMART:SM00384 EMBL:CH471064
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0007596
GO:GO:0008270 GO:GO:0001967 GO:GO:0006351 GO:GO:0003682
GO:GO:0016568 GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0000118 EMBL:AY090777 EMBL:AB051483
EMBL:AK021530 EMBL:AK023258 EMBL:BC015714 EMBL:BX648236
EMBL:AF208848 IPI:IPI00041959 IPI:IPI00054460 IPI:IPI00737174
RefSeq:NP_001095272.1 RefSeq:NP_057705.3 UniGene:Hs.502458 PDB:2PUY
PDB:2YQL PDBsum:2PUY PDBsum:2YQL ProteinModelPortal:Q96BD5
SMR:Q96BD5 IntAct:Q96BD5 MINT:MINT-1469147 STRING:Q96BD5
PhosphoSite:Q96BD5 DMDM:74731224 PaxDb:Q96BD5 PRIDE:Q96BD5
DNASU:51317 Ensembl:ENST00000257821 Ensembl:ENST00000323180
Ensembl:ENST00000418153 GeneID:51317 KEGG:hsa:51317 UCSC:uc001ncb.4
UCSC:uc001ncc.4 UCSC:uc001nce.2 CTD:51317 GeneCards:GC11M045950
HGNC:HGNC:24156 HPA:HPA023580 MIM:608325 neXtProt:NX_Q96BD5
PharmGKB:PA134977844 eggNOG:NOG310379 HOVERGEN:HBG080293
InParanoid:Q96BD5 OMA:SCTVNCN OrthoDB:EOG4KWJSH PhylomeDB:Q96BD5
EvolutionaryTrace:Q96BD5 GenomeRNAi:51317 NextBio:54681
ArrayExpress:Q96BD5 Bgee:Q96BD5 CleanEx:HS_PHF21A
Genevestigator:Q96BD5 GermOnline:ENSG00000135365 Uniprot:Q96BD5
Length = 680
Score = 136 (52.9 bits), Expect = 0.00072, Sum P(3) = 0.00072
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 704 LSLERPFSSKEN--DDLCGICMDGGDLLCCDSCPRAFHIDCVSLP--GIPSGTWHCRYCM 759
+SL P S+ + +D C +C G LL CD+C R +H+DC+ P IP G W C C
Sbjct: 474 VSLPSPTSTDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQ 533
Query: 760 NTFQKEK 766
+ K++
Sbjct: 534 DQMLKKE 540
Score = 39 (18.8 bits), Expect = 0.00072, Sum P(3) = 0.00072
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 427 SKVKGPGVSGLRGVVKGS 444
SKV GPG ++ V K +
Sbjct: 184 SKVTGPGAEAVQIVAKNT 201
Score = 37 (18.1 bits), Expect = 0.00072, Sum P(3) = 0.00072
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 583 GELTDTSNRSPEPNSAQ 599
G LT TS +S P+S +
Sbjct: 441 GALTPTSPQSSHPDSPE 457
Score = 37 (18.1 bits), Expect = 0.00072, Sum P(3) = 0.00072
Identities = 8/26 (30%), Positives = 12/26 (46%)
Query: 570 PPSVELEESPAPSGELTDTSNRSPEP 595
P S + +P E T+T+ P P
Sbjct: 445 PTSPQSSHPDSPENEKTETTFTFPAP 470
>UNIPROTKB|H0YEI1 [details] [associations]
symbol:DPF2 "Zinc finger protein ubi-d4" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
HGNC:HGNC:9964 ChiTaRS:DPF2 EMBL:AP000944 Ensembl:ENST00000531989
Bgee:H0YEI1 Uniprot:H0YEI1
Length = 116
Score = 97 (39.2 bits), Expect = 0.00077, P = 0.00077
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 728 LLCCDSCPRAFHIDCV--SLPGIPSGTWHCRYCMNTFQKEKFVEYNANA 774
LL CD C R +H+ C+ S+ P G+W C C++ +++ + N N+
Sbjct: 67 LLFCDDCDRGYHMYCLTPSMSEPPEGSWSCHLCLDLLKEKASIYQNQNS 115
>FB|FBgn0033155 [details] [associations]
symbol:Br140 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0033563 "dorsal/ventral axon
guidance" evidence=IMP] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR015880 InterPro:IPR019787
Pfam:PF00439 PRINTS:PR00503 PROSITE:PS00028 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50157 SMART:SM00249 SMART:SM00297
SMART:SM00355 Pfam:PF00855 EMBL:AE013599 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 eggNOG:COG5141
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 InterPro:IPR000313 PROSITE:PS50812
InterPro:IPR019542 Pfam:PF10513 SMART:SM00293 KO:K11348
GO:GO:0033563 HSSP:Q03330 GeneTree:ENSGT00690000101689
EMBL:AY118778 RefSeq:NP_610266.1 UniGene:Dm.11599 SMR:Q7JVP4
IntAct:Q7JVP4 EnsemblMetazoa:FBtr0089021 GeneID:35648
KEGG:dme:Dmel_CG1845 UCSC:CG1845-RA CTD:35648 FlyBase:FBgn0033155
HOGENOM:HOG000263960 InParanoid:Q7JVP4 OMA:GHNDSSM
OrthoDB:EOG42RBP5 GenomeRNAi:35648 NextBio:794417 Uniprot:Q7JVP4
Length = 1430
Score = 126 (49.4 bits), Expect = 0.00077, P = 0.00077
Identities = 37/135 (27%), Positives = 57/135 (42%)
Query: 714 ENDDLCGICMDG-----GDLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYCMNTFQKEKFV 768
++D +C IC+DG +L CD C A H DC +P IP G W CR C+ + K
Sbjct: 281 DDDAVCCICLDGECQNTNVILFCDMCNLAVHQDCYGVPYIPEGQWLCRRCLQSPSKPVNC 340
Query: 769 EYNANARAAGRIEGVDPFAQMVSRCIRIVQTPDTELGGCVLCRGRDFCKSRFGRRTVILC 828
NA A + +A +V C + P+ V D ++ R + C
Sbjct: 341 VLCPNAGGAFKQTDHGQWAHVV--CALWI--PEVRFANTVFLEPIDSIETIPPARWRLTC 396
Query: 829 DQCEREYHVGCLKDH 843
C+ + C++ H
Sbjct: 397 YVCKEKGLGACIQCH 411
>ZFIN|ZDB-GENE-080519-2 [details] [associations]
symbol:nsd1b "nuclear receptor binding SET domain
protein 1b" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0032259 "methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855
ZFIN:ZDB-GENE-080519-2 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024
GO:GO:0034968 InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 EMBL:BX842703 IPI:IPI00488658
Ensembl:ENSDART00000131188 Bgee:F1Q9U9 Uniprot:F1Q9U9
Length = 1873
Score = 118 (46.6 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 713 KENDDLCGICMDGGDLLCCD--SCPRAFHIDCVSLPGIPSGTWHC 755
KE +D C C DGG ++ C CP+ +H DC++L P+G W C
Sbjct: 1663 KEREDECFSCGDGGQIVSCKRPGCPKVYHADCLNLTKRPAGRWEC 1707
Score = 62 (26.9 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 27/88 (30%), Positives = 41/88 (46%)
Query: 3 NGTDSEEKFVVLSKIRVGLKREFEFALKVQSEICGSLGRTRARKVQSNVDSGCVLGPPEV 62
NG D+ L+ I G + F + L+ C G+T + SN SG + P+
Sbjct: 1588 NG-DTRVGLFSLTDIPAGTELTFNYNLE-----CLGNGKTVCKCGASNC-SGFLGVRPKN 1640
Query: 63 KKLKTYESRK-KRKRQEQSVVVKETEDK 89
+ RK K+KR+ Q V+KE ED+
Sbjct: 1641 NPPSDDKGRKLKKKRKSQQEVIKEREDE 1668
>RGD|1307748 [details] [associations]
symbol:Nsd1 "nuclear receptor binding SET domain protein 1"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0001702 "gastrulation with mouth forming second"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0003712
"transcription cofactor activity" evidence=IEA;ISO] [GO:0003714
"transcription corepressor activity" evidence=ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA;ISO] [GO:0010452
"histone H3-K36 methylation" evidence=ISO] [GO:0016571 "histone
methylation" evidence=ISO] [GO:0016922 "ligand-dependent nuclear
receptor binding" evidence=ISO] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0030331 "estrogen
receptor binding" evidence=ISO] [GO:0042054 "histone
methyltransferase activity" evidence=ISO] [GO:0042799 "histone
methyltransferase activity (H4-K20 specific)" evidence=ISO]
[GO:0042974 "retinoic acid receptor binding" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0046965 "retinoid X receptor binding"
evidence=ISO] [GO:0046966 "thyroid hormone receptor binding"
evidence=ISO] [GO:0046975 "histone methyltransferase activity
(H3-K36 specific)" evidence=ISO] [GO:0050681 "androgen receptor
binding" evidence=IEA;ISO] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 RGD:1307748 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 EMBL:CH474032
CTD:64324 KO:K15588 OrthoDB:EOG49GKFN IPI:IPI00779102
RefSeq:NP_001100807.1 UniGene:Rn.224915 Ensembl:ENSRNOT00000060928
GeneID:306764 KEGG:rno:306764 UCSC:RGD:1307748 NextBio:656473
Uniprot:D4AA06
Length = 2381
Score = 121 (47.7 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 20/46 (43%), Positives = 28/46 (60%)
Query: 712 SKENDDLCGICMDGGDLLCCDS--CPRAFHIDCVSLPGIPSGTWHC 755
+KE +D C C DGG L+ C CP+ +H DC++L P+G W C
Sbjct: 1804 TKEREDECFSCGDGGQLVSCKKPGCPKVYHADCLNLTKRPAGKWEC 1849
Score = 61 (26.5 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 31/93 (33%), Positives = 44/93 (47%)
Query: 3 NGTDSEEKFVVLSKIRVGLKREFEFALKVQSEICGSLGRTRARKVQSNVDSGCVLGPPEV 62
NG D+ LS I+ G + F + L+ C G+T + N SG + P+
Sbjct: 1725 NG-DTRVGLFALSDIKAGTELTFNYNLE-----CLGNGKTVCKCGAPNC-SGFLGVRPKN 1777
Query: 63 KKLKTYE-SRK-KRK----RQEQSVVVKETEDK 89
+ + T E SRK KRK R+ Q V KE ED+
Sbjct: 1778 QPIVTEEKSRKFKRKPHGKRRSQGEVTKEREDE 1810
>ASPGD|ASPL0000065953 [details] [associations]
symbol:AN7300 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0035556 "intracellular signal
transduction" evidence=IEA] InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00249 GO:GO:0046872
GO:GO:0008270 EMBL:BN001304 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AACD01000127 eggNOG:NOG145066
OrthoDB:EOG4N6053 RefSeq:XP_680569.1 ProteinModelPortal:Q5AWN0
EnsemblFungi:CADANIAT00000138 GeneID:2870174 KEGG:ani:AN7300.2
HOGENOM:HOG000168186 OMA:PPEGDWF Uniprot:Q5AWN0
Length = 841
Score = 115 (45.5 bits), Expect = 0.00081, Sum P(3) = 0.00081
Identities = 28/96 (29%), Positives = 39/96 (40%)
Query: 669 SPSQFEAHAGWASRRKPFQHIYTSNGVSLHELSIKLSLERPFSSK--ENDDLCGICMDGG 726
SP A+ + R H S V+ + L + + EN+D C C G
Sbjct: 401 SPGPIAANLDISVSRNTGAHRERSESVASSDAGDNRRLTPSLTDEPAENNDFCRQCEKSG 460
Query: 727 DLLCCDSCPRAFHIDCVSLP----GIPSGTWHCRYC 758
LLCCD C ++H C++ P P G W C C
Sbjct: 461 RLLCCDGCVYSYHFSCLNPPLDPANPPEGDWFCPKC 496
Score = 60 (26.2 bits), Expect = 0.00081, Sum P(3) = 0.00081
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 821 GRRTVILCDQCEREYHVGCL 840
GRR +I CD C +H+ CL
Sbjct: 587 GRRPIIQCDFCPCAFHMDCL 606
Score = 41 (19.5 bits), Expect = 0.00081, Sum P(3) = 0.00081
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 104 ERERPIREKESKDDS 118
+ ++P+ E E KDDS
Sbjct: 151 KEKQPVSEGEKKDDS 165
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.133 0.387 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 863 795 0.00096 121 3 11 23 0.45 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 173
No. of states in DFA: 616 (65 KB)
Total size of DFA: 387 KB (2188 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 83.67u 0.10s 83.77t Elapsed: 00:00:04
Total cpu time: 83.70u 0.11s 83.81t Elapsed: 00:00:04
Start: Fri May 10 03:41:41 2013 End: Fri May 10 03:41:45 2013
WARNINGS ISSUED: 1