Query 002944
Match_columns 863
No_of_seqs 359 out of 1402
Neff 4.0
Searched_HMMs 29240
Date Mon Mar 25 07:29:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002944.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002944hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ysm_A Myeloid/lymphoid or mix 99.7 1.8E-17 6.1E-22 152.2 7.9 94 712-861 3-102 (111)
2 2kwj_A Zinc finger protein DPF 99.6 1.8E-16 6.2E-21 147.0 4.5 89 717-861 2-106 (114)
3 3v43_A Histone acetyltransfera 99.6 1.1E-15 3.9E-20 141.2 3.9 91 715-860 4-109 (112)
4 4gne_A Histone-lysine N-methyl 99.5 9.7E-15 3.3E-19 135.1 6.7 86 711-857 10-98 (107)
5 2lbm_A Transcriptional regulat 99.3 5.6E-13 1.9E-17 128.9 0.9 98 657-764 13-120 (142)
6 1mm2_A MI2-beta; PHD, zinc fin 99.3 2.6E-12 9E-17 107.5 4.6 54 711-764 4-59 (61)
7 1fp0_A KAP-1 corepressor; PHD 99.1 2.2E-11 7.6E-16 109.3 5.1 50 711-760 20-71 (88)
8 1xwh_A Autoimmune regulator; P 99.1 1.8E-11 6.1E-16 103.7 3.3 49 712-760 4-54 (66)
9 2yql_A PHD finger protein 21A; 99.1 4.8E-11 1.6E-15 98.0 3.4 49 712-760 5-55 (56)
10 2puy_A PHD finger protein 21A; 99.1 2.9E-11 9.9E-16 100.5 2.1 49 713-761 2-52 (60)
11 2l5u_A Chromodomain-helicase-D 99.0 5.6E-11 1.9E-15 99.4 2.3 49 712-760 7-57 (61)
12 2lri_C Autoimmune regulator; Z 99.0 7.9E-11 2.7E-15 100.4 3.1 48 713-760 9-58 (66)
13 2l43_A N-teminal domain from h 99.0 5.9E-11 2E-15 106.1 2.1 51 711-761 20-75 (88)
14 3o36_A Transcription intermedi 99.0 1.1E-10 3.6E-15 115.6 4.2 50 714-763 2-53 (184)
15 2ku3_A Bromodomain-containing 99.0 5.5E-11 1.9E-15 102.7 1.4 50 711-760 11-65 (71)
16 3u5n_A E3 ubiquitin-protein li 99.0 1.4E-10 4.9E-15 116.9 3.8 51 712-762 3-55 (207)
17 2yt5_A Metal-response element- 98.9 4.1E-10 1.4E-14 94.6 2.3 48 713-760 3-60 (66)
18 2ro1_A Transcription intermedi 98.9 6.4E-10 2.2E-14 111.4 3.8 48 716-763 2-51 (189)
19 3v43_A Histone acetyltransfera 98.9 6.4E-10 2.2E-14 102.8 3.0 82 654-760 22-111 (112)
20 1f62_A Transcription factor WS 98.9 5.5E-10 1.9E-14 89.6 2.0 43 718-760 2-49 (51)
21 2kwj_A Zinc finger protein DPF 98.9 4.7E-10 1.6E-14 104.0 1.6 82 655-761 20-108 (114)
22 1wev_A Riken cDNA 1110020M19; 98.9 5.1E-10 1.8E-14 99.9 1.7 48 714-761 14-72 (88)
23 2e6r_A Jumonji/ARID domain-con 98.8 1.3E-09 4.5E-14 98.1 3.6 49 712-760 12-65 (92)
24 2e6s_A E3 ubiquitin-protein li 98.7 6.4E-09 2.2E-13 91.1 4.0 45 716-760 26-76 (77)
25 3ql9_A Transcriptional regulat 98.7 1E-09 3.6E-14 104.7 -1.6 53 710-762 51-112 (129)
26 2ysm_A Myeloid/lymphoid or mix 98.7 7.9E-09 2.7E-13 94.8 4.0 78 657-760 21-103 (111)
27 3ask_A E3 ubiquitin-protein li 98.7 7.8E-09 2.7E-13 106.7 3.6 45 716-760 174-224 (226)
28 3asl_A E3 ubiquitin-protein li 98.7 8.7E-09 3E-13 88.6 2.9 43 718-760 20-68 (70)
29 1wen_A Inhibitor of growth fam 98.5 1E-07 3.4E-12 82.3 4.9 47 714-761 14-65 (71)
30 3shb_A E3 ubiquitin-protein li 98.5 6.8E-08 2.3E-12 84.7 3.4 43 718-760 28-76 (77)
31 3c6w_A P28ING5, inhibitor of g 98.4 6.6E-08 2.2E-12 80.6 1.8 45 715-760 8-57 (59)
32 2vnf_A ING 4, P29ING4, inhibit 98.4 7.2E-08 2.5E-12 80.5 1.7 45 715-760 9-58 (60)
33 3asl_A E3 ubiquitin-protein li 98.4 2.3E-07 7.8E-12 79.7 4.5 45 807-861 21-67 (70)
34 2k16_A Transcription initiatio 98.3 9E-08 3.1E-12 82.3 1.4 50 713-762 15-69 (75)
35 3shb_A E3 ubiquitin-protein li 98.3 2.5E-07 8.6E-12 81.1 4.2 45 807-861 29-75 (77)
36 1weu_A Inhibitor of growth fam 98.3 3E-07 1E-11 83.1 4.7 47 714-761 34-85 (91)
37 2g6q_A Inhibitor of growth pro 98.3 1.2E-07 4.3E-12 79.7 1.7 45 715-760 10-59 (62)
38 2e6s_A E3 ubiquitin-protein li 98.3 5.8E-07 2E-11 78.7 4.5 45 807-861 29-75 (77)
39 2jmi_A Protein YNG1, ING1 homo 98.2 4.3E-07 1.5E-11 81.9 2.9 46 714-760 24-75 (90)
40 1f62_A Transcription factor WS 98.2 4.7E-07 1.6E-11 72.5 2.7 46 806-861 2-48 (51)
41 2yql_A PHD finger protein 21A; 98.2 8.6E-07 2.9E-11 72.7 3.9 45 804-861 9-54 (56)
42 1mm2_A MI2-beta; PHD, zinc fin 98.2 9.8E-07 3.4E-11 73.7 3.8 47 802-861 7-54 (61)
43 2puy_A PHD finger protein 21A; 98.2 9.3E-07 3.2E-11 73.3 3.5 45 804-861 5-50 (60)
44 2lri_C Autoimmune regulator; Z 98.2 5.7E-07 1.9E-11 76.7 2.2 43 805-860 13-56 (66)
45 1xwh_A Autoimmune regulator; P 98.1 9.8E-07 3.4E-11 74.6 3.4 46 803-861 7-53 (66)
46 2l5u_A Chromodomain-helicase-D 98.1 1.4E-06 4.8E-11 72.8 3.2 46 803-861 10-56 (61)
47 1fp0_A KAP-1 corepressor; PHD 98.1 2.3E-06 7.7E-11 77.0 4.4 47 803-862 24-71 (88)
48 3ask_A E3 ubiquitin-protein li 98.0 2.4E-06 8.2E-11 88.3 4.4 45 807-861 177-223 (226)
49 2e6r_A Jumonji/ARID domain-con 98.0 1.8E-06 6.3E-11 77.7 2.7 47 805-861 17-64 (92)
50 2lv9_A Histone-lysine N-methyl 97.9 4.3E-06 1.5E-10 75.9 3.5 43 718-761 32-76 (98)
51 1wev_A Riken cDNA 1110020M19; 97.8 1.1E-05 3.7E-10 72.0 3.6 53 805-861 17-70 (88)
52 2ku3_A Bromodomain-containing 97.7 1.3E-05 4.6E-10 69.1 3.4 50 803-861 15-64 (71)
53 2k16_A Transcription initiatio 97.7 1.1E-05 3.8E-10 69.2 2.7 48 804-861 18-66 (75)
54 1x4i_A Inhibitor of growth pro 97.7 7E-06 2.4E-10 70.6 1.1 46 715-761 5-55 (70)
55 2lv9_A Histone-lysine N-methyl 97.7 2.1E-05 7.1E-10 71.4 4.2 45 804-860 28-73 (98)
56 2yt5_A Metal-response element- 97.7 1.9E-05 6.5E-10 66.1 3.5 50 804-861 6-59 (66)
57 2l43_A N-teminal domain from h 97.6 2.6E-05 9E-10 69.7 2.4 50 803-861 24-73 (88)
58 1wen_A Inhibitor of growth fam 97.5 7.8E-05 2.7E-09 64.3 4.1 45 803-861 15-63 (71)
59 3c6w_A P28ING5, inhibitor of g 97.4 4E-05 1.4E-09 63.8 1.8 44 804-861 9-56 (59)
60 2ri7_A Nucleosome-remodeling f 97.4 1.5E-05 5E-10 77.9 -1.8 47 714-761 6-59 (174)
61 1we9_A PHD finger family prote 97.4 8.8E-05 3E-09 61.8 3.2 48 713-760 3-57 (64)
62 4gne_A Histone-lysine N-methyl 97.4 0.00012 4.2E-09 67.8 4.3 44 803-861 14-60 (107)
63 1weu_A Inhibitor of growth fam 97.4 8.4E-05 2.9E-09 67.2 3.1 45 803-861 35-83 (91)
64 2vnf_A ING 4, P29ING4, inhibit 97.3 5.8E-05 2E-09 63.0 1.8 44 804-861 10-57 (60)
65 2jmi_A Protein YNG1, ING1 homo 97.3 0.00013 4.3E-09 65.9 3.3 44 803-860 25-73 (90)
66 2g6q_A Inhibitor of growth pro 97.3 8.1E-05 2.8E-09 62.7 1.8 44 804-861 11-58 (62)
67 4bbq_A Lysine-specific demethy 97.3 6.4E-05 2.2E-09 69.1 1.2 103 717-861 8-112 (117)
68 2xb1_A Pygopus homolog 2, B-ce 97.1 8.9E-05 3E-09 68.2 0.9 45 717-761 4-61 (105)
69 1wil_A KIAA1045 protein; ring 97.1 0.00016 5.5E-09 64.7 2.2 48 713-760 12-75 (89)
70 3o70_A PHD finger protein 13; 96.9 0.00057 2E-08 58.4 4.0 46 804-860 19-64 (68)
71 2rsd_A E3 SUMO-protein ligase 96.9 0.00042 1.4E-08 58.9 3.1 44 716-760 10-64 (68)
72 1x4i_A Inhibitor of growth pro 96.9 0.00032 1.1E-08 60.3 2.3 44 804-861 6-53 (70)
73 1wee_A PHD finger family prote 96.9 0.00061 2.1E-08 58.3 4.0 51 801-861 13-64 (72)
74 1we9_A PHD finger family prote 96.9 0.00051 1.7E-08 57.2 3.3 50 803-860 5-55 (64)
75 3o70_A PHD finger protein 13; 96.9 0.00055 1.9E-08 58.5 3.3 47 713-760 16-66 (68)
76 2vpb_A Hpygo1, pygopus homolog 96.8 0.00011 3.8E-09 62.4 -1.2 47 713-759 5-64 (65)
77 1wem_A Death associated transc 96.8 0.00018 6.3E-09 62.0 -0.0 47 713-760 13-69 (76)
78 1wew_A DNA-binding family prot 96.8 0.00032 1.1E-08 61.0 1.1 45 715-760 15-71 (78)
79 1wee_A PHD finger family prote 96.6 0.00087 3E-08 57.4 2.7 45 715-760 15-65 (72)
80 1wep_A PHF8; structural genomi 96.5 0.0004 1.4E-08 60.4 0.0 46 715-761 11-63 (79)
81 1wem_A Death associated transc 96.4 0.0011 3.7E-08 57.2 1.9 50 804-861 16-68 (76)
82 1wil_A KIAA1045 protein; ring 96.4 0.00076 2.6E-08 60.4 0.9 49 805-860 16-73 (89)
83 2lbm_A Transcriptional regulat 96.4 0.00087 3E-08 65.0 1.4 49 804-861 63-115 (142)
84 1wep_A PHF8; structural genomi 96.3 0.0014 5E-08 56.9 2.1 51 802-861 10-61 (79)
85 1wew_A DNA-binding family prot 96.3 0.0019 6.4E-08 56.2 2.7 51 803-861 15-70 (78)
86 2rsd_A E3 SUMO-protein ligase 96.2 0.003 1E-07 53.6 3.8 47 806-860 12-62 (68)
87 2kgg_A Histone demethylase jar 96.2 0.0011 3.9E-08 53.5 1.1 41 719-759 5-52 (52)
88 3ql9_A Transcriptional regulat 96.1 0.00064 2.2E-08 65.1 -1.2 49 803-860 56-108 (129)
89 3o7a_A PHD finger protein 13 v 96.1 0.0026 8.9E-08 51.3 2.5 43 807-860 7-49 (52)
90 2ri7_A Nucleosome-remodeling f 96.1 0.00098 3.4E-08 65.0 -0.1 49 804-861 8-57 (174)
91 2vpb_A Hpygo1, pygopus homolog 96.0 0.00043 1.5E-08 58.8 -2.4 52 805-861 9-64 (65)
92 2xb1_A Pygopus homolog 2, B-ce 96.0 0.0019 6.4E-08 59.4 1.5 48 806-861 5-59 (105)
93 3kqi_A GRC5, PHD finger protei 95.8 0.0023 8E-08 55.1 1.2 49 804-861 10-59 (75)
94 2lq6_A Bromodomain-containing 95.8 0.0029 9.8E-08 56.5 1.7 39 801-846 14-54 (87)
95 2kgg_A Histone demethylase jar 95.7 0.0024 8.4E-08 51.5 1.0 46 807-860 5-51 (52)
96 3o7a_A PHD finger protein 13 v 95.5 0.0051 1.7E-07 49.6 2.1 37 724-760 14-51 (52)
97 3kqi_A GRC5, PHD finger protei 95.3 0.0038 1.3E-07 53.8 0.7 40 721-760 14-60 (75)
98 3a1b_A DNA (cytosine-5)-methyl 95.1 0.0052 1.8E-07 60.7 1.2 52 711-762 74-135 (159)
99 3lqh_A Histone-lysine N-methyl 94.6 0.0067 2.3E-07 60.9 0.4 46 717-762 3-64 (183)
100 3kv5_D JMJC domain-containing 94.2 0.0063 2.2E-07 69.1 -0.8 45 716-761 37-88 (488)
101 2pv0_B DNA (cytosine-5)-methyl 93.4 0.017 6E-07 63.9 0.6 52 711-762 88-149 (386)
102 3pur_A Lysine-specific demethy 93.0 0.033 1.1E-06 63.9 2.1 35 726-760 56-93 (528)
103 3kv5_D JMJC domain-containing 91.7 0.032 1.1E-06 63.4 0.0 50 803-861 36-86 (488)
104 1ufn_A Putative nuclear protei 90.9 0.025 8.5E-07 51.6 -1.6 49 653-702 33-83 (94)
105 1h5p_A Nuclear autoantigen SP1 89.8 0.011 3.7E-07 54.0 -4.8 46 656-702 31-78 (95)
106 3kv4_A PHD finger protein 8; e 88.2 0.041 1.4E-06 61.9 -2.8 40 721-760 9-55 (447)
107 1oqj_A Glucocorticoid modulato 87.6 0.056 1.9E-06 49.6 -1.8 37 665-702 40-76 (97)
108 4bbq_A Lysine-specific demethy 85.3 0.31 1.1E-05 44.6 1.8 34 727-760 74-113 (117)
109 3pur_A Lysine-specific demethy 81.2 0.43 1.5E-05 54.9 1.2 38 821-861 54-92 (528)
110 2ku7_A MLL1 PHD3-CYP33 RRM chi 80.2 0.35 1.2E-05 43.8 0.1 35 728-762 2-45 (140)
111 3a1b_A DNA (cytosine-5)-methyl 69.1 1.3 4.4E-05 43.9 0.8 48 804-860 79-131 (159)
112 4ap4_A E3 ubiquitin ligase RNF 63.3 0.57 1.9E-05 42.2 -2.8 96 715-842 6-108 (133)
113 3rsn_A SET1/ASH2 histone methy 62.3 3.1 0.0001 41.8 2.0 39 722-760 10-58 (177)
114 3o36_A Transcription intermedi 56.9 4.8 0.00017 39.5 2.4 34 516-549 14-54 (184)
115 2ct0_A Non-SMC element 1 homol 56.7 2.3 8E-05 36.8 0.1 47 714-760 13-60 (74)
116 1iym_A EL5; ring-H2 finger, ub 55.6 4.3 0.00015 31.4 1.4 45 715-761 4-52 (55)
117 1vyx_A ORF K3, K3RING; zinc-bi 55.4 0.64 2.2E-05 38.5 -3.6 48 714-761 4-56 (60)
118 2d8s_A Cellular modulator of i 53.6 1.7 5.9E-05 37.7 -1.3 50 713-762 12-68 (80)
119 2pv0_B DNA (cytosine-5)-methyl 53.3 2.5 8.5E-05 47.0 -0.4 48 804-860 93-145 (386)
120 1x4j_A Ring finger protein 38; 51.2 3.4 0.00011 34.3 0.1 46 714-761 21-69 (75)
121 3u5n_A E3 ubiquitin-protein li 49.1 6.3 0.00022 39.5 1.8 31 517-547 18-55 (207)
122 2kiz_A E3 ubiquitin-protein li 48.8 4.7 0.00016 32.7 0.7 47 713-761 11-60 (69)
123 1h5p_A Nuclear autoantigen SP1 48.2 5.6 0.00019 36.4 1.1 50 444-493 30-79 (95)
124 2ro1_A Transcription intermedi 47.7 8.9 0.0003 38.2 2.6 31 516-546 12-49 (189)
125 1ufn_A Putative nuclear protei 47.3 6.3 0.00022 36.0 1.3 36 457-493 48-84 (94)
126 1v87_A Deltex protein 2; ring- 46.5 3.4 0.00011 36.9 -0.6 48 715-762 24-92 (114)
127 2ysl_A Tripartite motif-contai 43.8 9.1 0.00031 31.1 1.7 49 713-762 17-67 (73)
128 3k1l_B Fancl; UBC, ring, RWD, 42.7 7.5 0.00026 43.1 1.2 48 715-762 307-371 (381)
129 2ecl_A Ring-box protein 2; RNF 42.3 6.2 0.00021 33.6 0.4 27 732-762 46-74 (81)
130 2ct0_A Non-SMC element 1 homol 42.3 10 0.00035 32.7 1.8 30 804-841 15-44 (74)
131 2ect_A Ring finger protein 126 40.8 9.3 0.00032 31.6 1.3 47 714-762 13-62 (78)
132 4a0k_B E3 ubiquitin-protein li 38.6 7.3 0.00025 36.4 0.3 27 733-761 83-109 (117)
133 1weq_A PHD finger protein 7; s 37.3 18 0.00062 32.4 2.6 33 727-760 45-78 (85)
134 1oqj_A Glucocorticoid modulato 36.7 8.4 0.00029 35.4 0.4 56 437-493 17-77 (97)
135 1bor_A Transcription factor PM 36.3 29 0.001 27.3 3.5 42 715-761 5-46 (56)
136 2l0b_A E3 ubiquitin-protein li 34.4 4.3 0.00015 35.3 -1.9 52 711-764 35-89 (91)
137 3dpl_R Ring-box protein 1; ubi 33.4 7.2 0.00024 35.6 -0.6 44 713-763 34-100 (106)
138 1x4j_A Ring finger protein 38; 31.0 18 0.00062 29.8 1.5 34 803-842 22-55 (75)
139 1iym_A EL5; ring-H2 finger, ub 31.0 30 0.001 26.5 2.7 33 805-842 6-38 (55)
140 2ea6_A Ring finger protein 4; 30.4 11 0.00038 30.0 0.1 47 714-762 13-66 (69)
141 3ng2_A RNF4, snurf, ring finge 30.2 11 0.00037 30.4 -0.0 48 714-763 8-62 (71)
142 3nw0_A Non-structural maintena 29.6 11 0.00038 38.9 -0.0 45 716-760 180-225 (238)
143 2egp_A Tripartite motif-contai 29.4 25 0.00084 28.9 2.1 48 715-763 11-64 (79)
144 2lq6_A Bromodomain-containing 28.3 16 0.00055 32.4 0.8 27 717-743 18-48 (87)
145 2d8t_A Dactylidin, ring finger 28.2 12 0.00043 30.5 0.0 48 714-764 13-61 (71)
146 2kiz_A E3 ubiquitin-protein li 28.1 28 0.00094 28.0 2.1 33 804-842 14-46 (69)
147 1chc_A Equine herpes virus-1 r 28.1 13 0.00044 29.8 0.1 46 715-762 4-50 (68)
148 3pfq_A PKC-B, PKC-beta, protei 26.9 34 0.0012 39.6 3.4 95 716-842 48-147 (674)
149 2yur_A Retinoblastoma-binding 26.8 9.4 0.00032 31.7 -1.0 48 714-761 13-61 (74)
150 2ecn_A Ring finger protein 141 26.5 8.8 0.0003 31.1 -1.2 46 714-762 13-58 (70)
151 3l11_A E3 ubiquitin-protein li 25.8 26 0.0009 31.2 1.7 49 714-763 13-61 (115)
152 2xeu_A Ring finger protein 4; 24.3 13 0.00043 29.2 -0.6 45 716-762 3-54 (64)
153 2ecm_A Ring finger and CHY zin 22.9 48 0.0017 25.2 2.5 33 805-842 6-38 (55)
154 1jm7_A BRCA1, breast cancer ty 22.5 13 0.00045 32.6 -0.9 48 716-763 21-69 (112)
155 2ct2_A Tripartite motif protei 22.3 13 0.00046 31.0 -0.9 49 714-762 13-66 (88)
156 2ect_A Ring finger protein 126 22.3 55 0.0019 26.8 2.9 33 804-842 15-47 (78)
157 2ecw_A Tripartite motif-contai 22.2 27 0.00093 28.7 1.0 49 714-763 17-70 (85)
158 2ecl_A Ring-box protein 2; RNF 21.7 30 0.001 29.3 1.2 18 825-842 42-59 (81)
159 2djb_A Polycomb group ring fin 21.6 26 0.00088 28.7 0.7 48 713-762 12-60 (72)
160 3lrq_A E3 ubiquitin-protein li 21.5 9.9 0.00034 33.5 -1.9 49 715-764 21-70 (100)
161 2d8s_A Cellular modulator of i 21.4 50 0.0017 28.5 2.6 34 804-842 15-51 (80)
162 4ayc_A E3 ubiquitin-protein li 20.6 13 0.00045 34.5 -1.4 44 716-762 53-97 (138)
No 1
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=99.70 E-value=1.8e-17 Score=152.20 Aligned_cols=94 Identities=26% Similarity=0.656 Sum_probs=81.1
Q ss_pred CccccccccccccCCce---EEcCCCCCccccCCCCCCC--CCCCCcccccccccccchhhhhccccccccCcccccCch
Q 002944 712 SKENDDLCGICMDGGDL---LCCDSCPRAFHIDCVSLPG--IPSGTWHCRYCMNTFQKEKFVEYNANARAAGRIEGVDPF 786 (863)
Q Consensus 712 ~~endd~C~VC~dgGdL---L~CD~CpraFH~~CL~L~~--vP~G~W~C~~C~~~~~keKfve~n~nava~Gri~GvdPi 786 (863)
+..++++|.+|+++|++ |+|+.|+++||+.|++++. ++.+.|+|+.|..
T Consensus 3 ~~~~~~~C~~C~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~W~C~~C~~-------------------------- 56 (111)
T 2ysm_A 3 SGSSGANCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVTPLKRAGWQCPECKV-------------------------- 56 (111)
T ss_dssp CCCCCSCBTTTCCCCCTTTSEECSSSCCEECTTTTTCCCCTTTSTTCCCTTTCC--------------------------
T ss_pred CCCCCCCCcCCCCCCCCcCCeECCCCCCCcChHHhCCccccccccCccCCcCCc--------------------------
Confidence 45688999999999976 9999999999999998654 4579999999973
Q ss_pred hcccccccccccCCCCCcCccccCCCCCcCCCCCCCCceEecccccccccccccccCCCCCCC-CCCCCcceeeee
Q 002944 787 AQMVSRCIRIVQTPDTELGGCVLCRGRDFCKSRFGRRTVILCDQCEREYHVGCLKDHGMEDLQ-VPQLLVYDTISF 861 (863)
Q Consensus 787 eQi~kRC~RIvk~~~~e~~~C~ICkk~dfsks~f~~gtII~CDqCeraYHV~CLr~aGL~dLK-lPe~~wy~~iC~ 861 (863)
|.+|++.+ .+..++.||+|+++||..||++ .|+ +|++.|+++.|.
T Consensus 57 --------------------C~~C~~~~------~~~~ll~Cd~C~~~yH~~Cl~p----pl~~~P~g~W~C~~C~ 102 (111)
T 2ysm_A 57 --------------------CQNCKQSG------EDSKMLVCDTCDKGYHTFCLQP----VMKSVPTNGWKCKNCR 102 (111)
T ss_dssp --------------------CTTTCCCS------CCTTEEECSSSCCEEEGGGSSS----CCSSCCSSCCCCHHHH
T ss_pred --------------------ccccCccC------CCCCeeECCCCCcHHhHHhcCC----ccccCCCCCcCCcCCc
Confidence 88998853 3457999999999999999994 677 999999999874
No 2
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=99.61 E-value=1.8e-16 Score=147.05 Aligned_cols=89 Identities=27% Similarity=0.809 Sum_probs=76.2
Q ss_pred ccccccccC----------CceEEcCCCCCccccCCCCCC-----CCCCCCcccccccccccchhhhhccccccccCccc
Q 002944 717 DLCGICMDG----------GDLLCCDSCPRAFHIDCVSLP-----GIPSGTWHCRYCMNTFQKEKFVEYNANARAAGRIE 781 (863)
Q Consensus 717 d~C~VC~dg----------GdLL~CD~CpraFH~~CL~L~-----~vP~G~W~C~~C~~~~~keKfve~n~nava~Gri~ 781 (863)
++|.+|.++ ++||+|+.|+++||+.|++++ .++.+.|+|+.|..
T Consensus 2 ~~C~~C~~~~~~n~k~g~~~~Li~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~--------------------- 60 (114)
T 2kwj_A 2 SYCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTLNMTEAVKTYKWQCIECKS--------------------- 60 (114)
T ss_dssp CCCSSSCCBTTBCTTTCCCCCCEECSSSCCEECTTTTTCCHHHHHHHHHTTCCCGGGCC---------------------
T ss_pred CcCccCCCCccccccCCCCCCCeEeCCCCCccchhhCCChhhhhhccCCCccCccccCc---------------------
Confidence 578888754 489999999999999999876 57789999999963
Q ss_pred ccCchhcccccccccccCCCCCcCccccCCCCCcCCCCCCCCceEecccccccccccccccCCCCCCC-CCCCCcceeee
Q 002944 782 GVDPFAQMVSRCIRIVQTPDTELGGCVLCRGRDFCKSRFGRRTVILCDQCEREYHVGCLKDHGMEDLQ-VPQLLVYDTIS 860 (863)
Q Consensus 782 GvdPieQi~kRC~RIvk~~~~e~~~C~ICkk~dfsks~f~~gtII~CDqCeraYHV~CLr~aGL~dLK-lPe~~wy~~iC 860 (863)
|.+|++.+ ..+.+|.||.|+++||+.||. +.|. +|++.|+++.|
T Consensus 61 -------------------------C~~C~~~~------~~~~ll~Cd~C~~~yH~~Cl~----ppl~~~P~g~W~C~~C 105 (114)
T 2kwj_A 61 -------------------------CILCGTSE------NDDQLLFCDDCDRGYHMYCLN----PPVAEPPEGSWSCHLC 105 (114)
T ss_dssp -------------------------CTTTTCCT------TTTTEEECSSSCCEEETTTSS----SCCSSCCSSCCCCHHH
T ss_pred -------------------------cCcccccC------CCCceEEcCCCCccccccccC----CCccCCCCCCeECccc
Confidence 88998743 357899999999999999999 4677 99999999887
Q ss_pred e
Q 002944 861 F 861 (863)
Q Consensus 861 ~ 861 (863)
-
T Consensus 106 ~ 106 (114)
T 2kwj_A 106 W 106 (114)
T ss_dssp H
T ss_pred c
Confidence 3
No 3
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=99.56 E-value=1.1e-15 Score=141.15 Aligned_cols=91 Identities=24% Similarity=0.716 Sum_probs=76.5
Q ss_pred cccccccccc---------CCceEEcCCCCCccccCCCCCC-----CCCCCCcccccccccccchhhhhccccccccCcc
Q 002944 715 NDDLCGICMD---------GGDLLCCDSCPRAFHIDCVSLP-----GIPSGTWHCRYCMNTFQKEKFVEYNANARAAGRI 780 (863)
Q Consensus 715 ndd~C~VC~d---------gGdLL~CD~CpraFH~~CL~L~-----~vP~G~W~C~~C~~~~~keKfve~n~nava~Gri 780 (863)
...+|.+|.. +++||.|+.|+++||++|+++. .++.+.|+|+.|+.
T Consensus 4 p~~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~-------------------- 63 (112)
T 3v43_A 4 PIPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIECKT-------------------- 63 (112)
T ss_dssp CCSSBTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHHTCCHHHHHHHHTSCCCCTTTCC--------------------
T ss_pred cCccccccCCchhhCcCCCchhceEhhhcCCCCCCchhcCCHHHHHHhhccccccccCCc--------------------
Confidence 4577888864 4589999999999999999763 46789999999973
Q ss_pred cccCchhcccccccccccCCCCCcCccccCCCCCcCCCCCCCCceEecccccccccccccccCCCCCCC-CCCCCcceee
Q 002944 781 EGVDPFAQMVSRCIRIVQTPDTELGGCVLCRGRDFCKSRFGRRTVILCDQCEREYHVGCLKDHGMEDLQ-VPQLLVYDTI 859 (863)
Q Consensus 781 ~GvdPieQi~kRC~RIvk~~~~e~~~C~ICkk~dfsks~f~~gtII~CDqCeraYHV~CLr~aGL~dLK-lPe~~wy~~i 859 (863)
|.+|+..+ ...+.+|.||.|+++||..||. +.|. +|++.|++..
T Consensus 64 --------------------------C~vC~~~~-----~~~~~ll~Cd~C~~~yH~~Cl~----p~l~~~P~~~W~C~~ 108 (112)
T 3v43_A 64 --------------------------CSSCRDQG-----KNADNMLFCDSCDRGFHMECCD----PPLTRMPKGMWICQI 108 (112)
T ss_dssp --------------------------BTTTCCCC-----CTTCCCEECTTTCCEECGGGCS----SCCSSCCSSCCCCTT
T ss_pred --------------------------cccccCcC-----CCccceEEcCCCCCeeecccCC----CCCCCCCCCCeECCC
Confidence 88998742 2356899999999999999998 4577 9999999988
Q ss_pred e
Q 002944 860 S 860 (863)
Q Consensus 860 C 860 (863)
|
T Consensus 109 C 109 (112)
T 3v43_A 109 C 109 (112)
T ss_dssp T
T ss_pred C
Confidence 7
No 4
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=99.52 E-value=9.7e-15 Score=135.15 Aligned_cols=86 Identities=30% Similarity=0.713 Sum_probs=74.4
Q ss_pred CCccccccccccccCCceEEcC--CCCCccccCCCCCCCCCCCCcccccccccccchhhhhccccccccCcccccCchhc
Q 002944 711 SSKENDDLCGICMDGGDLLCCD--SCPRAFHIDCVSLPGIPSGTWHCRYCMNTFQKEKFVEYNANARAAGRIEGVDPFAQ 788 (863)
Q Consensus 711 s~~endd~C~VC~dgGdLL~CD--~CpraFH~~CL~L~~vP~G~W~C~~C~~~~~keKfve~n~nava~Gri~GvdPieQ 788 (863)
....++++|.+|+++|+||+|| .|+++||+.|+++..+|.|.|+|+.|.
T Consensus 10 ~~~~~~~~C~~C~~~G~ll~CD~~~Cp~~fH~~Cl~L~~~P~g~W~Cp~c~----------------------------- 60 (107)
T 4gne_A 10 PKQMHEDYCFQCGDGGELVMCDKKDCPKAYHLLCLNLTQPPYGKWECPWHQ----------------------------- 60 (107)
T ss_dssp CCCSSCSSCTTTCCCSEEEECCSTTCCCEECTGGGTCSSCCSSCCCCGGGB-----------------------------
T ss_pred CcCCCCCCCCcCCCCCcEeEECCCCCCcccccccCcCCcCCCCCEECCCCC-----------------------------
Confidence 4567889999999999999999 899999999999999999999999996
Q ss_pred ccccccccccCCCCCcCccccCCCCCcCCCCCCCCceEecccccccccccccccCCCCCCC-CCCCCcce
Q 002944 789 MVSRCIRIVQTPDTELGGCVLCRGRDFCKSRFGRRTVILCDQCEREYHVGCLKDHGMEDLQ-VPQLLVYD 857 (863)
Q Consensus 789 i~kRC~RIvk~~~~e~~~C~ICkk~dfsks~f~~gtII~CDqCeraYHV~CLr~aGL~dLK-lPe~~wy~ 857 (863)
|.+|++. +.+.|..|+++||.+|+. ..|. .|.+-|.+
T Consensus 61 ------------------C~~C~k~----------~~~~C~~Cp~sfC~~c~~----g~l~~~~~~~~~c 98 (107)
T 4gne_A 61 ------------------CDECSSA----------AVSFCEFCPHSFCKDHEK----GALVPSALEGRLC 98 (107)
T ss_dssp ------------------CTTTCSB----------CCEECSSSSCEECTTTCT----TSCEECTTTTCEE
T ss_pred ------------------CCcCCCC----------CCcCcCCCCcchhhhccC----CcceecCCCCcee
Confidence 6678773 238899999999999998 4566 77777754
No 5
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=99.27 E-value=5.6e-13 Score=128.86 Aligned_cols=98 Identities=26% Similarity=0.464 Sum_probs=69.5
Q ss_pred CeeEeCCCCCccChhhhhhccCcccCCCCCceeEecCCccchhhhh-hhccCCCCCCccccccccccccCCceEEcCCCC
Q 002944 657 FGILCTCCNSEVSPSQFEAHAGWASRRKPFQHIYTSNGVSLHELSI-KLSLERPFSSKENDDLCGICMDGGDLLCCDSCP 735 (863)
Q Consensus 657 ~GI~CsCCn~~~SPSeFEaHAG~~srRkPy~sIytsnG~SL~elai-~Lsk~r~~s~~endd~C~VC~dgGdLL~CD~Cp 735 (863)
++|.|.+|+..+++.+| +..+++|+..+.+.. .... .+...-....+.++++|.+|++||+|++||.||
T Consensus 13 ~~i~Ct~Cg~~~~~~q~-----~~~~~HPll~v~~C~-----~C~~~y~~~~~~~d~Dg~~d~C~vC~~GG~LlcCD~Cp 82 (142)
T 2lbm_A 13 GIVSCTACGQQVNHFQK-----DSIYRHPSLQVLICK-----NCFKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCH 82 (142)
T ss_dssp CCCBCTTTCSBSTTTCS-----SSEEEETTTTEEEEH-----HHHHHHHHSCCCBCTTSCBCSCSSSCCCSSEEECSSSC
T ss_pred CCCEecCCCCccccccc-----cchhcCCCccccccH-----HHHHHHhcCCceecCCCCCCeecccCCCCcEEeCCCCC
Confidence 68999999999987553 334456777663210 0000 011111224567889999999999999999999
Q ss_pred CccccCCCCCC-------C--CCCCCcccccccccccc
Q 002944 736 RAFHIDCVSLP-------G--IPSGTWHCRYCMNTFQK 764 (863)
Q Consensus 736 raFH~~CL~L~-------~--vP~G~W~C~~C~~~~~k 764 (863)
++||..|+.++ . .|.|+|+|+.|......
T Consensus 83 r~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~~pl~ 120 (142)
T 2lbm_A 83 NAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPLL 120 (142)
T ss_dssp CEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCCCTTH
T ss_pred CeeeHhhcCCCCChhhhhhcccCCCCCEeecccCccHH
Confidence 99999999622 2 48999999999975443
No 6
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=99.26 E-value=2.6e-12 Score=107.46 Aligned_cols=54 Identities=46% Similarity=1.214 Sum_probs=48.1
Q ss_pred CCccccccccccccCCceEEcCCCCCccccCCCC--CCCCCCCCcccccccccccc
Q 002944 711 SSKENDDLCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYCMNTFQK 764 (863)
Q Consensus 711 s~~endd~C~VC~dgGdLL~CD~CpraFH~~CL~--L~~vP~G~W~C~~C~~~~~k 764 (863)
..+.++++|.+|+++|+||+||.|+++||++|+. +..+|.|.|+|+.|.....+
T Consensus 4 ~~d~~~~~C~vC~~~g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~~~k 59 (61)
T 1mm2_A 4 GSDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPALK 59 (61)
T ss_dssp CSCSSCSSCTTTCCCSSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTTCCT
T ss_pred cccCCCCcCCCCCCCCCEEEcCCCCHHHcccccCCCcCcCCCCccCChhhcCchhc
Confidence 3456789999999999999999999999999997 67899999999999876544
No 7
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=99.15 E-value=2.2e-11 Score=109.34 Aligned_cols=50 Identities=32% Similarity=0.972 Sum_probs=46.2
Q ss_pred CCccccccccccccCCceEEcCCCCCccccCCC--CCCCCCCCCcccccccc
Q 002944 711 SSKENDDLCGICMDGGDLLCCDSCPRAFHIDCV--SLPGIPSGTWHCRYCMN 760 (863)
Q Consensus 711 s~~endd~C~VC~dgGdLL~CD~CpraFH~~CL--~L~~vP~G~W~C~~C~~ 760 (863)
....++++|.+|+++|+||+||.|+++||++|+ ++..+|.|+|+|+.|..
T Consensus 20 ~~d~n~~~C~vC~~~g~LL~CD~C~~~fH~~Cl~PpL~~~P~g~W~C~~C~~ 71 (88)
T 1fp0_A 20 TLDDSATICRVCQKPGDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHV 71 (88)
T ss_dssp SSSSSSSCCSSSCSSSCCEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCC
T ss_pred ccCCCCCcCcCcCCCCCEEECCCCCCceecccCCCCCCCCcCCCcCCccccC
Confidence 456788999999999999999999999999999 57799999999999985
No 8
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=99.13 E-value=1.8e-11 Score=103.70 Aligned_cols=49 Identities=57% Similarity=1.455 Sum_probs=45.2
Q ss_pred CccccccccccccCCceEEcCCCCCccccCCCC--CCCCCCCCcccccccc
Q 002944 712 SKENDDLCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYCMN 760 (863)
Q Consensus 712 ~~endd~C~VC~dgGdLL~CD~CpraFH~~CL~--L~~vP~G~W~C~~C~~ 760 (863)
...++++|.+|+++|+||+||.|+++||+.|++ +..+|.|.|+|+.|..
T Consensus 4 ~~~~~~~C~vC~~~g~ll~CD~C~~~fH~~Cl~ppl~~~P~g~W~C~~C~~ 54 (66)
T 1xwh_A 4 AQKNEDECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQ 54 (66)
T ss_dssp CCSCCCSBSSSSCCSSCEECSSCCCEECTTTSSSCCSSCCSSCCCCHHHHH
T ss_pred CCCCCCCCccCCCCCCEEEcCCCChhhcccccCCCcCcCCCCCeECccccC
Confidence 356889999999999999999999999999997 6789999999999985
No 9
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.07 E-value=4.8e-11 Score=97.97 Aligned_cols=49 Identities=43% Similarity=1.173 Sum_probs=44.7
Q ss_pred CccccccccccccCCceEEcCCCCCccccCCCC--CCCCCCCCcccccccc
Q 002944 712 SKENDDLCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYCMN 760 (863)
Q Consensus 712 ~~endd~C~VC~dgGdLL~CD~CpraFH~~CL~--L~~vP~G~W~C~~C~~ 760 (863)
...++++|.+|+++|+||+||.|+++||+.|+. +..+|.|.|+|+.|..
T Consensus 5 ~~~~~~~C~vC~~~g~ll~Cd~C~~~~H~~Cl~ppl~~~p~g~W~C~~C~~ 55 (56)
T 2yql_A 5 SSGHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD 55 (56)
T ss_dssp CCSSCCSCSSSCCSSCCEECSSSSCEECSSSSSSCCCSCCCSSCCCHHHHC
T ss_pred cCCCCCCCccCCCCCeEEEcCCCCcceECccCCCCcCCCCCCceEChhhhC
Confidence 456789999999999999999999999999997 6789999999999963
No 10
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=99.07 E-value=2.9e-11 Score=100.45 Aligned_cols=49 Identities=41% Similarity=1.135 Sum_probs=44.8
Q ss_pred ccccccccccccCCceEEcCCCCCccccCCCC--CCCCCCCCccccccccc
Q 002944 713 KENDDLCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYCMNT 761 (863)
Q Consensus 713 ~endd~C~VC~dgGdLL~CD~CpraFH~~CL~--L~~vP~G~W~C~~C~~~ 761 (863)
+.++++|.+|+++|+||+||.|+++||+.|++ +..+|.|.|+|+.|...
T Consensus 2 d~~~~~C~vC~~~g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~ 52 (60)
T 2puy_A 2 MIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQ 52 (60)
T ss_dssp CCCCSSCTTTCCCSSCEECSSSSCEECGGGSSSCCSSCCCSCCCCHHHHHH
T ss_pred CCCCCCCcCCCCCCcEEEcCCCCcCEECCcCCCCcCCCCCCceEChhccCh
Confidence 35789999999999999999999999999997 67899999999999864
No 11
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=99.03 E-value=5.6e-11 Score=99.42 Aligned_cols=49 Identities=37% Similarity=1.127 Sum_probs=44.6
Q ss_pred CccccccccccccCCceEEcCCCCCccccCCCCC--CCCCCCCcccccccc
Q 002944 712 SKENDDLCGICMDGGDLLCCDSCPRAFHIDCVSL--PGIPSGTWHCRYCMN 760 (863)
Q Consensus 712 ~~endd~C~VC~dgGdLL~CD~CpraFH~~CL~L--~~vP~G~W~C~~C~~ 760 (863)
...++++|.+|+++|+||+||.|+++||+.|+.+ ..+|.|.|+|+.|..
T Consensus 7 ~~~~~~~C~vC~~~g~ll~CD~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~~ 57 (61)
T 2l5u_A 7 ETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEK 57 (61)
T ss_dssp SSCCCSSCTTTSCCSSEEECSSSSCEEEHHHHCTTCCSCCCSSCCCTTGGG
T ss_pred cCCCCCCCccCCCCCcEEECCCCChhhhhhccCCCCCCCCCCceECccccc
Confidence 3567799999999999999999999999999975 589999999999975
No 12
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=99.03 E-value=7.9e-11 Score=100.37 Aligned_cols=48 Identities=35% Similarity=0.757 Sum_probs=43.5
Q ss_pred ccccccccccccCCceEEcCCCCCccccCCCC--CCCCCCCCcccccccc
Q 002944 713 KENDDLCGICMDGGDLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYCMN 760 (863)
Q Consensus 713 ~endd~C~VC~dgGdLL~CD~CpraFH~~CL~--L~~vP~G~W~C~~C~~ 760 (863)
..+...|.+|+++|+||+||.|+++||++|+. +..+|.|.|+|+.|..
T Consensus 9 ~~~~~~C~vC~~~~~ll~Cd~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~~ 58 (66)
T 2lri_C 9 LAPGARCGVCGDGTDVLRCTHCAAAFHWRCHFPAGTSRPGTGLRCRSCSG 58 (66)
T ss_dssp CCTTCCCTTTSCCTTCEECSSSCCEECHHHHCTTTCCCCSSSCCCTTTTT
T ss_pred CCCCCCcCCCCCCCeEEECCCCCCceecccCCCccCcCCCCCEECccccC
Confidence 44567899999999999999999999999995 6689999999999975
No 13
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=99.02 E-value=5.9e-11 Score=106.11 Aligned_cols=51 Identities=45% Similarity=1.064 Sum_probs=46.5
Q ss_pred CCccccccccccccCC-----ceEEcCCCCCccccCCCCCCCCCCCCccccccccc
Q 002944 711 SSKENDDLCGICMDGG-----DLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYCMNT 761 (863)
Q Consensus 711 s~~endd~C~VC~dgG-----dLL~CD~CpraFH~~CL~L~~vP~G~W~C~~C~~~ 761 (863)
...++++.|.+|++++ +||+||.|+++||+.|++++.+|.|.|||+.|...
T Consensus 20 ~~~~~~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~vP~g~W~C~~C~~~ 75 (88)
T 2l43_A 20 SLIDEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQS 75 (88)
T ss_dssp CCCCCCCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSSCCSSCCCCHHHHHH
T ss_pred CcCCCCCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCccCCCceECccccCc
Confidence 4456789999999987 89999999999999999999999999999999863
No 14
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=99.02 E-value=1.1e-10 Score=115.59 Aligned_cols=50 Identities=44% Similarity=1.307 Sum_probs=45.4
Q ss_pred cccccccccccCCceEEcCCCCCccccCCC--CCCCCCCCCccccccccccc
Q 002944 714 ENDDLCGICMDGGDLLCCDSCPRAFHIDCV--SLPGIPSGTWHCRYCMNTFQ 763 (863)
Q Consensus 714 endd~C~VC~dgGdLL~CD~CpraFH~~CL--~L~~vP~G~W~C~~C~~~~~ 763 (863)
.|+++|.+|+++|+|++||+|+++||..|+ ++..+|.|.|+|+.|+....
T Consensus 2 ~~~~~C~~C~~~g~ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~~~ 53 (184)
T 3o36_A 2 PNEDWCAVCQNGGELLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFCRDLSK 53 (184)
T ss_dssp CSCSSCTTTCCCSSCEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSSS
T ss_pred CCCCccccCCCCCeeeecCCCCcccCccccCCCCCCCCCCCEECccccCccc
Confidence 578999999999999999999999999999 46789999999999997543
No 15
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=99.01 E-value=5.5e-11 Score=102.67 Aligned_cols=50 Identities=46% Similarity=1.076 Sum_probs=45.5
Q ss_pred CCccccccccccccCC-----ceEEcCCCCCccccCCCCCCCCCCCCcccccccc
Q 002944 711 SSKENDDLCGICMDGG-----DLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYCMN 760 (863)
Q Consensus 711 s~~endd~C~VC~dgG-----dLL~CD~CpraFH~~CL~L~~vP~G~W~C~~C~~ 760 (863)
....+++.|.+|++++ +||+||.|+++||++|++++.+|+|+|||+.|..
T Consensus 11 ~~~~~~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~~vP~g~W~C~~C~~ 65 (71)
T 2ku3_A 11 SLIDEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQ 65 (71)
T ss_dssp CCCCSSCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCSSCCSSCCCCHHHHH
T ss_pred cCCCCCCCCCCCCCCCCCCCCCEEECCCCCCccccccCCCCcCCCCCcCCccCcC
Confidence 3456789999999875 8999999999999999999999999999999985
No 16
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=98.99 E-value=1.4e-10 Score=116.86 Aligned_cols=51 Identities=45% Similarity=1.262 Sum_probs=46.1
Q ss_pred CccccccccccccCCceEEcCCCCCccccCCC--CCCCCCCCCcccccccccc
Q 002944 712 SKENDDLCGICMDGGDLLCCDSCPRAFHIDCV--SLPGIPSGTWHCRYCMNTF 762 (863)
Q Consensus 712 ~~endd~C~VC~dgGdLL~CD~CpraFH~~CL--~L~~vP~G~W~C~~C~~~~ 762 (863)
.+.++++|.+|+++|+||+||+|+++||+.|+ ++..+|.|.|+|+.|....
T Consensus 3 ~d~~~~~C~~C~~~g~ll~Cd~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~ 55 (207)
T 3u5n_A 3 DDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIG 55 (207)
T ss_dssp CCSSCSSBTTTCCCEEEEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSS
T ss_pred CCCCCCCCCCCCCCCceEEcCCCCCccCCccCCCCCCCCCCCCEEeCceeCcc
Confidence 45688999999999999999999999999999 4668999999999998743
No 17
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=98.89 E-value=4.1e-10 Score=94.59 Aligned_cols=48 Identities=27% Similarity=0.788 Sum_probs=42.3
Q ss_pred ccccccccccccC-----CceEEcCCCCCccccCCCCCCC----C-CCCCcccccccc
Q 002944 713 KENDDLCGICMDG-----GDLLCCDSCPRAFHIDCVSLPG----I-PSGTWHCRYCMN 760 (863)
Q Consensus 713 ~endd~C~VC~dg-----GdLL~CD~CpraFH~~CL~L~~----v-P~G~W~C~~C~~ 760 (863)
..+++.|.+|+.+ ++||+||.|+++||+.|++++. + |.|.|+|+.|..
T Consensus 3 ~~~~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~ 60 (66)
T 2yt5_A 3 SGSSGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVF 60 (66)
T ss_dssp CCCCCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCCHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCcccccccCCCCCEECCCCcC
Confidence 4577899999987 8999999999999999998652 3 899999999985
No 18
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=98.88 E-value=6.4e-10 Score=111.36 Aligned_cols=48 Identities=33% Similarity=0.959 Sum_probs=43.8
Q ss_pred cccccccccCCceEEcCCCCCccccCCC--CCCCCCCCCccccccccccc
Q 002944 716 DDLCGICMDGGDLLCCDSCPRAFHIDCV--SLPGIPSGTWHCRYCMNTFQ 763 (863)
Q Consensus 716 dd~C~VC~dgGdLL~CD~CpraFH~~CL--~L~~vP~G~W~C~~C~~~~~ 763 (863)
+++|.+|+++|+|++||+|+++||+.|+ ++..+|.|.|+|+.|.....
T Consensus 2 ~~~C~~C~~~g~ll~Cd~C~~~~H~~Cl~p~l~~~p~g~W~C~~C~~~~~ 51 (189)
T 2ro1_A 2 ATICRVCQKPGDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLPD 51 (189)
T ss_dssp CCCBTTTCCCSSCCCCTTTCCBCCSTTSTTCCSSCCCTTCCTTTTSCSCC
T ss_pred CCcCccCCCCCceeECCCCCchhccccCCCCcccCCCCCCCCcCccCCCC
Confidence 5899999999999999999999999999 47789999999999987543
No 19
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=98.87 E-value=6.4e-10 Score=102.79 Aligned_cols=82 Identities=32% Similarity=0.707 Sum_probs=59.7
Q ss_pred eeCCeeEeCCCCCccChhhhhhccCcc--cCCCCCceeEecCCccchhhhhhhccCCCCCCccccccccccccCC----c
Q 002944 654 KKGFGILCTCCNSEVSPSQFEAHAGWA--SRRKPFQHIYTSNGVSLHELSIKLSLERPFSSKENDDLCGICMDGG----D 727 (863)
Q Consensus 654 k~G~GI~CsCCn~~~SPSeFEaHAG~~--srRkPy~sIytsnG~SL~elai~Lsk~r~~s~~endd~C~VC~dgG----d 727 (863)
..++.|.|+.|++.||++......... ..+..|.- .+-.+|.+|+++| +
T Consensus 22 ~~~~Ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C-------------------------~~C~~C~vC~~~~~~~~~ 76 (112)
T 3v43_A 22 KPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQC-------------------------IECKTCSSCRDQGKNADN 76 (112)
T ss_dssp CCCCCEECTTTCCEECHHHHTCCHHHHHHHHTSCCCC-------------------------TTTCCBTTTCCCCCTTCC
T ss_pred CchhceEhhhcCCCCCCchhcCCHHHHHHhhcccccc-------------------------ccCCccccccCcCCCccc
Confidence 346789999999999998764321110 00111211 1223799999764 8
Q ss_pred eEEcCCCCCccccCCC--CCCCCCCCCcccccccc
Q 002944 728 LLCCDSCPRAFHIDCV--SLPGIPSGTWHCRYCMN 760 (863)
Q Consensus 728 LL~CD~CpraFH~~CL--~L~~vP~G~W~C~~C~~ 760 (863)
||+||.|+++||++|+ ++..+|.|.|+|+.|+.
T Consensus 77 ll~Cd~C~~~yH~~Cl~p~l~~~P~~~W~C~~C~~ 111 (112)
T 3v43_A 77 MLFCDSCDRGFHMECCDPPLTRMPKGMWICQICRP 111 (112)
T ss_dssp CEECTTTCCEECGGGCSSCCSSCCSSCCCCTTTSC
T ss_pred eEEcCCCCCeeecccCCCCCCCCCCCCeECCCCCC
Confidence 9999999999999999 47799999999999974
No 20
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=98.86 E-value=5.5e-10 Score=89.61 Aligned_cols=43 Identities=40% Similarity=1.099 Sum_probs=38.7
Q ss_pred cccccccCC---ceEEcCCCCCccccCCC--CCCCCCCCCcccccccc
Q 002944 718 LCGICMDGG---DLLCCDSCPRAFHIDCV--SLPGIPSGTWHCRYCMN 760 (863)
Q Consensus 718 ~C~VC~dgG---dLL~CD~CpraFH~~CL--~L~~vP~G~W~C~~C~~ 760 (863)
.|.+|++++ +||+||.|+++||+.|+ ++..+|.|.|+|+.|..
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~C~~~~H~~Cl~p~l~~~P~g~W~C~~C~~ 49 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQP 49 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSC
T ss_pred CCCCCCCCCCCCCEEECCCCChhhCcccCCCCcCCCCCCcEECcCccc
Confidence 689999765 69999999999999999 47789999999999975
No 21
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=98.85 E-value=4.7e-10 Score=104.04 Aligned_cols=82 Identities=23% Similarity=0.592 Sum_probs=59.5
Q ss_pred eCCeeEeCCCCCccChhhhhhccCcc--cCCCCCceeEecCCccchhhhhhhccCCCCCCcccccccccccc---CCceE
Q 002944 655 KGFGILCTCCNSEVSPSQFEAHAGWA--SRRKPFQHIYTSNGVSLHELSIKLSLERPFSSKENDDLCGICMD---GGDLL 729 (863)
Q Consensus 655 ~G~GI~CsCCn~~~SPSeFEaHAG~~--srRkPy~sIytsnG~SL~elai~Lsk~r~~s~~endd~C~VC~d---gGdLL 729 (863)
.++.|.|..|++.||++.......+. .+...|+ -..-..|.+|+. ++.||
T Consensus 20 ~~~Li~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~-------------------------C~~C~~C~~C~~~~~~~~ll 74 (114)
T 2kwj_A 20 PEELVSCADCGRSGHPTCLQFTLNMTEAVKTYKWQ-------------------------CIECKSCILCGTSENDDQLL 74 (114)
T ss_dssp CCCCEECSSSCCEECTTTTTCCHHHHHHHHHTTCC-------------------------CGGGCCCTTTTCCTTTTTEE
T ss_pred CCCCeEeCCCCCccchhhCCChhhhhhccCCCccC-------------------------ccccCccCcccccCCCCceE
Confidence 35789999999999998754322110 0000111 112246889987 57899
Q ss_pred EcCCCCCccccCCCC--CCCCCCCCccccccccc
Q 002944 730 CCDSCPRAFHIDCVS--LPGIPSGTWHCRYCMNT 761 (863)
Q Consensus 730 ~CD~CpraFH~~CL~--L~~vP~G~W~C~~C~~~ 761 (863)
+||.|+++||++|++ +..+|.|.|+|+.|...
T Consensus 75 ~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~~ 108 (114)
T 2kwj_A 75 FCDDCDRGYHMYCLNPPVAEPPEGSWSCHLCWEL 108 (114)
T ss_dssp ECSSSCCEEETTTSSSCCSSCCSSCCCCHHHHHH
T ss_pred EcCCCCccccccccCCCccCCCCCCeECccccch
Confidence 999999999999997 67899999999999753
No 22
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.85 E-value=5.1e-10 Score=99.92 Aligned_cols=48 Identities=27% Similarity=0.652 Sum_probs=42.1
Q ss_pred cccccccccccC-----CceEEcCCCCCccccCCCCCC------CCCCCCccccccccc
Q 002944 714 ENDDLCGICMDG-----GDLLCCDSCPRAFHIDCVSLP------GIPSGTWHCRYCMNT 761 (863)
Q Consensus 714 endd~C~VC~dg-----GdLL~CD~CpraFH~~CL~L~------~vP~G~W~C~~C~~~ 761 (863)
+++++|.+|+.+ +.||+||.|+++||++|+.++ .+|.|.|+|+.|...
T Consensus 14 e~~~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~~ 72 (88)
T 1wev_A 14 EMGLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQ 72 (88)
T ss_dssp HHCCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHH
T ss_pred CCCCcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCcccccccCCCCCCeeCccccch
Confidence 467899999987 689999999999999999754 379999999999863
No 23
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.83 E-value=1.3e-09 Score=98.08 Aligned_cols=49 Identities=39% Similarity=0.991 Sum_probs=43.7
Q ss_pred CccccccccccccCC---ceEEcCCCCCccccCCCC--CCCCCCCCcccccccc
Q 002944 712 SKENDDLCGICMDGG---DLLCCDSCPRAFHIDCVS--LPGIPSGTWHCRYCMN 760 (863)
Q Consensus 712 ~~endd~C~VC~dgG---dLL~CD~CpraFH~~CL~--L~~vP~G~W~C~~C~~ 760 (863)
...+++.|.+|++++ .||+||.|+++||+.|+. +..+|.|.|+|+.|..
T Consensus 12 ~~~~~~~C~vC~~~~~~~~ll~CD~C~~~~H~~Cl~Ppl~~~P~g~W~C~~C~~ 65 (92)
T 2e6r_A 12 QFIDSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCIL 65 (92)
T ss_dssp CCCCCCCCSSSCCSGGGGGCEECTTTCCEECSSSSSSCCSSCCSSCCCCHHHHH
T ss_pred hccCCCCCccCCCcCCCCCEEEcCCCCchhccccCCCCcccCCCCCcCCccCcC
Confidence 445678999999887 499999999999999997 6789999999999985
No 24
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.71 E-value=6.4e-09 Score=91.08 Aligned_cols=45 Identities=33% Similarity=0.828 Sum_probs=40.4
Q ss_pred cccccccc---cCCceEEcCCCCCccccCCCC--CCCCCCC-Ccccccccc
Q 002944 716 DDLCGICM---DGGDLLCCDSCPRAFHIDCVS--LPGIPSG-TWHCRYCMN 760 (863)
Q Consensus 716 dd~C~VC~---dgGdLL~CD~CpraFH~~CL~--L~~vP~G-~W~C~~C~~ 760 (863)
+..|.+|+ ++++||+||.|+++||++|+. +..+|.| .|+|+.|..
T Consensus 26 ~c~C~vC~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 76 (77)
T 2e6s_A 26 SCSCRVCGGKHEPNMQLLCDECNVAYHIYCLNPPLDKVPEEEYWYCPSCKT 76 (77)
T ss_dssp SSSCSSSCCCCCSTTEEECSSSCCEEETTSSSSCCSSCCCSSCCCCTTTCC
T ss_pred CCCCcCcCCcCCCCCEEEcCCCCccccccccCCCccCCCCCCCcCCcCccC
Confidence 45899999 578999999999999999997 6789999 999999974
No 25
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=98.70 E-value=1e-09 Score=104.65 Aligned_cols=53 Identities=34% Similarity=0.818 Sum_probs=45.4
Q ss_pred CCCccccccccccccCCceEEcCCCCCccccCCCCC-------CCC--CCCCcccccccccc
Q 002944 710 FSSKENDDLCGICMDGGDLLCCDSCPRAFHIDCVSL-------PGI--PSGTWHCRYCMNTF 762 (863)
Q Consensus 710 ~s~~endd~C~VC~dgGdLL~CD~CpraFH~~CL~L-------~~v--P~G~W~C~~C~~~~ 762 (863)
...+.++++|.+|++||+|++||.||++||..|+.+ ..+ |.+.|+|..|...+
T Consensus 51 ~d~Dg~~~~C~vC~dGG~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~~p 112 (129)
T 3ql9_A 51 RDSDGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHPEP 112 (129)
T ss_dssp BCTTSCBSSCTTTCCCSEEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCCGG
T ss_pred cCCCCCCCcCeecCCCCeeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCCHH
Confidence 345778899999999999999999999999999962 233 88999999998743
No 26
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=98.69 E-value=7.9e-09 Score=94.79 Aligned_cols=78 Identities=23% Similarity=0.674 Sum_probs=57.8
Q ss_pred CeeEeCCCCCccChhhhhhccCcccCCCCCceeEecCCccchhhhhhhccCCCCCCccccccccccccCCc---eEEcCC
Q 002944 657 FGILCTCCNSEVSPSQFEAHAGWASRRKPFQHIYTSNGVSLHELSIKLSLERPFSSKENDDLCGICMDGGD---LLCCDS 733 (863)
Q Consensus 657 ~GI~CsCCn~~~SPSeFEaHAG~~srRkPy~sIytsnG~SL~elai~Lsk~r~~s~~endd~C~VC~dgGd---LL~CD~ 733 (863)
+.|.|..|++.||++......... .+..|.- ..-..|.+|+.+++ ||+||.
T Consensus 21 ~ll~C~~C~~~~H~~Cl~~~~~~~-~~~~W~C-------------------------~~C~~C~~C~~~~~~~~ll~Cd~ 74 (111)
T 2ysm_A 21 DQFFCTTCGQHYHGMCLDIAVTPL-KRAGWQC-------------------------PECKVCQNCKQSGEDSKMLVCDT 74 (111)
T ss_dssp TSEECSSSCCEECTTTTTCCCCTT-TSTTCCC-------------------------TTTCCCTTTCCCSCCTTEEECSS
T ss_pred CCeECCCCCCCcChHHhCCccccc-cccCccC-------------------------CcCCcccccCccCCCCCeeECCC
Confidence 348999999999998765433211 1111111 11237999998875 999999
Q ss_pred CCCccccCCCC--CCCCCCCCcccccccc
Q 002944 734 CPRAFHIDCVS--LPGIPSGTWHCRYCMN 760 (863)
Q Consensus 734 CpraFH~~CL~--L~~vP~G~W~C~~C~~ 760 (863)
|+++||++|+. +..+|.|.|+|+.|..
T Consensus 75 C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~ 103 (111)
T 2ysm_A 75 CDKGYHTFCLQPVMKSVPTNGWKCKNCRI 103 (111)
T ss_dssp SCCEEEGGGSSSCCSSCCSSCCCCHHHHC
T ss_pred CCcHHhHHhcCCccccCCCCCcCCcCCcC
Confidence 99999999996 6689999999999975
No 27
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=98.66 E-value=7.8e-09 Score=106.68 Aligned_cols=45 Identities=40% Similarity=0.891 Sum_probs=36.4
Q ss_pred ccccccccc---CCceEEcCCCCCccccCCCC--CCCCCCC-Ccccccccc
Q 002944 716 DDLCGICMD---GGDLLCCDSCPRAFHIDCVS--LPGIPSG-TWHCRYCMN 760 (863)
Q Consensus 716 dd~C~VC~d---gGdLL~CD~CpraFH~~CL~--L~~vP~G-~W~C~~C~~ 760 (863)
+..|.+|+. ++.||+||.|+++||+.|+. +..+|.| .|+|+.|..
T Consensus 174 ~c~C~vC~~~~~~~~lL~CD~C~~~yH~~CL~PPL~~vP~G~~W~Cp~C~~ 224 (226)
T 3ask_A 174 VCACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 224 (226)
T ss_dssp TTSCSSSCCCCC--CCEECSSSCCEECSCC--CCCCSCCSSSCCCCGGGC-
T ss_pred CCCCcCCCCCCCCCCeEEcCCCCcceeCccCCCCcccCCCCCCCCCcCCcC
Confidence 446999986 67899999999999999997 6689999 999999975
No 28
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=98.65 E-value=8.7e-09 Score=88.56 Aligned_cols=43 Identities=44% Similarity=1.015 Sum_probs=38.9
Q ss_pred cccccc---cCCceEEcCCCCCccccCCCC--CCCCCCC-Ccccccccc
Q 002944 718 LCGICM---DGGDLLCCDSCPRAFHIDCVS--LPGIPSG-TWHCRYCMN 760 (863)
Q Consensus 718 ~C~VC~---dgGdLL~CD~CpraFH~~CL~--L~~vP~G-~W~C~~C~~ 760 (863)
.|.+|+ ++++||+||.|+++||++||+ +..+|.| .|+|+.|..
T Consensus 20 ~C~~C~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 68 (70)
T 3asl_A 20 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 68 (70)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEEGGGSSSCCSSCCSSSCCCCTTTSC
T ss_pred CCcCCCCcCCCCCEEEcCCCCCceecccCCCCcCCCCCCCCcCCcCccC
Confidence 678888 577999999999999999997 7789999 999999975
No 29
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=98.48 E-value=1e-07 Score=82.29 Aligned_cols=47 Identities=34% Similarity=0.984 Sum_probs=41.5
Q ss_pred ccccccccccc--CCceEEcCC--CC-CccccCCCCCCCCCCCCccccccccc
Q 002944 714 ENDDLCGICMD--GGDLLCCDS--CP-RAFHIDCVSLPGIPSGTWHCRYCMNT 761 (863)
Q Consensus 714 endd~C~VC~d--gGdLL~CD~--Cp-raFH~~CL~L~~vP~G~W~C~~C~~~ 761 (863)
....+| +|++ .|.||.||. |+ ..||..|+++..+|.|.|||+.|...
T Consensus 14 ~~~~~C-~C~~~~~g~MI~CD~~~C~~~wfH~~Cvgl~~~p~g~w~Cp~C~~~ 65 (71)
T 1wen_A 14 NEPTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQE 65 (71)
T ss_dssp TSCCCS-TTCCCSCSSEECCSCSSCSCCCEETTTTTCSSCCSSCCCCTTTSSC
T ss_pred CCCCEE-ECCCCCCCCEeEeeCCCCCCccEecccCCcCcCCCCCEECCCCCcc
Confidence 455788 7997 689999999 88 69999999999999999999999863
No 30
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=98.46 E-value=6.8e-08 Score=84.69 Aligned_cols=43 Identities=42% Similarity=0.985 Sum_probs=37.2
Q ss_pred cccccccC---CceEEcCCCCCccccCCCC--CCCCCCCC-cccccccc
Q 002944 718 LCGICMDG---GDLLCCDSCPRAFHIDCVS--LPGIPSGT-WHCRYCMN 760 (863)
Q Consensus 718 ~C~VC~dg---GdLL~CD~CpraFH~~CL~--L~~vP~G~-W~C~~C~~ 760 (863)
.|.+|+.. +.||+||.|+++||++|+. +..+|.|. |+|+.|+.
T Consensus 28 ~C~vC~~~~d~~~ll~CD~C~~~yH~~Cl~PpL~~~P~g~~W~C~~C~~ 76 (77)
T 3shb_A 28 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 76 (77)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEETTTSSSCCSSCCSSSCCCCTTTC-
T ss_pred cCCccCCCCCCcceeEeCCCCCccCcccCCCcccCCCCCCceECcCccc
Confidence 57777765 5799999999999999997 67899999 99999974
No 31
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=98.40 E-value=6.6e-08 Score=80.64 Aligned_cols=45 Identities=38% Similarity=1.099 Sum_probs=40.2
Q ss_pred cccccccccc--CCceEEcCC--CC-CccccCCCCCCCCCCCCcccccccc
Q 002944 715 NDDLCGICMD--GGDLLCCDS--CP-RAFHIDCVSLPGIPSGTWHCRYCMN 760 (863)
Q Consensus 715 ndd~C~VC~d--gGdLL~CD~--Cp-raFH~~CL~L~~vP~G~W~C~~C~~ 760 (863)
...+| +|++ .|+||.||. |+ ..||..|+++...|.|.|+|+.|..
T Consensus 8 e~~yC-~C~~~~~g~mi~CD~~~C~~~wfH~~Cvgl~~~p~~~w~Cp~C~~ 57 (59)
T 3c6w_A 8 EPTYC-LCHQVSYGEMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCPRCVQ 57 (59)
T ss_dssp CCEET-TTTEECCSEEEECSCTTCSSCEEETGGGTCSSCCSSCCCCHHHHC
T ss_pred CCcEE-ECCCCCCCCeeEeeCCCCCCCCEecccCCcccCCCCCEECcCccC
Confidence 45678 8997 789999999 88 6999999999999999999999974
No 32
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=98.39 E-value=7.2e-08 Score=80.51 Aligned_cols=45 Identities=36% Similarity=1.021 Sum_probs=39.8
Q ss_pred cccccccccc--CCceEEcCC--CC-CccccCCCCCCCCCCCCcccccccc
Q 002944 715 NDDLCGICMD--GGDLLCCDS--CP-RAFHIDCVSLPGIPSGTWHCRYCMN 760 (863)
Q Consensus 715 ndd~C~VC~d--gGdLL~CD~--Cp-raFH~~CL~L~~vP~G~W~C~~C~~ 760 (863)
...+| +|++ .|.||.||. |+ ..||..|+++..+|.|.|+|+.|..
T Consensus 9 e~~~C-~C~~~~~g~mi~CD~cdC~~~wfH~~Cvgl~~~p~g~w~C~~C~~ 58 (60)
T 2vnf_A 9 EPTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQ 58 (60)
T ss_dssp CCEET-TTTEECCSEEEECSCTTCSSCEEETGGGTCSSCCSSCCCCHHHHC
T ss_pred CCCEE-ECCCcCCCCEEEeCCCCCCCceEehhcCCCCcCCCCCEECcCccC
Confidence 45678 8987 689999999 77 7999999999999999999999974
No 33
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=98.37 E-value=2.3e-07 Score=79.74 Aligned_cols=45 Identities=33% Similarity=0.747 Sum_probs=38.7
Q ss_pred cccCCCCCcCCCCCCCCceEecccccccccccccccCCCCCCC-CCCC-Ccceeeee
Q 002944 807 CVLCRGRDFCKSRFGRRTVILCDQCEREYHVGCLKDHGMEDLQ-VPQL-LVYDTISF 861 (863)
Q Consensus 807 C~ICkk~dfsks~f~~gtII~CDqCeraYHV~CLr~aGL~dLK-lPe~-~wy~~iC~ 861 (863)
|.+|++.+ ..+.+|.||.|+++||+.||. +.|. +|++ .|+++.|-
T Consensus 21 C~~C~~~~------~~~~ll~CD~C~~~yH~~Cl~----Ppl~~~P~g~~W~C~~C~ 67 (70)
T 3asl_A 21 CHLCGGRQ------DPDKQLMCDECDMAFHIYCLD----PPLSSVPSEDEWYCPECR 67 (70)
T ss_dssp BTTTCCCS------CGGGEEECTTTCCEEEGGGSS----SCCSSCCSSSCCCCTTTS
T ss_pred CcCCCCcC------CCCCEEEcCCCCCceecccCC----CCcCCCCCCCCcCCcCcc
Confidence 88898743 357899999999999999999 4677 9999 99999874
No 34
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=98.35 E-value=9e-08 Score=82.29 Aligned_cols=50 Identities=24% Similarity=0.611 Sum_probs=41.3
Q ss_pred ccccccccccccC---CceEEcCCCCCccccCCCCCCC--CCCCCcccccccccc
Q 002944 713 KENDDLCGICMDG---GDLLCCDSCPRAFHIDCVSLPG--IPSGTWHCRYCMNTF 762 (863)
Q Consensus 713 ~endd~C~VC~dg---GdLL~CD~CpraFH~~CL~L~~--vP~G~W~C~~C~~~~ 762 (863)
..+..+|.+|+.+ +.||+||.|++.||..|++++. +|.+.|+|+.|....
T Consensus 15 ~~~~~~C~~C~~~~~~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~~~ 69 (75)
T 2k16_A 15 GNQIWICPGCNKPDDGSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCANKI 69 (75)
T ss_dssp SCEEECBTTTTBCCSSCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTHHHH
T ss_pred CCCCcCCCCCCCCCCCCCEEEcCCCCcccccccCCCCccCCCCCCEEChhccCch
Confidence 4566789999975 4799999999999999998764 446899999998643
No 35
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=98.35 E-value=2.5e-07 Score=81.13 Aligned_cols=45 Identities=33% Similarity=0.738 Sum_probs=38.7
Q ss_pred cccCCCCCcCCCCCCCCceEecccccccccccccccCCCCCCC-CCCCC-cceeeee
Q 002944 807 CVLCRGRDFCKSRFGRRTVILCDQCEREYHVGCLKDHGMEDLQ-VPQLL-VYDTISF 861 (863)
Q Consensus 807 C~ICkk~dfsks~f~~gtII~CDqCeraYHV~CLr~aGL~dLK-lPe~~-wy~~iC~ 861 (863)
|.+|++.+ .++.+|.||.|+++||..||. +.|. +|++. |+++.|-
T Consensus 29 C~vC~~~~------d~~~ll~CD~C~~~yH~~Cl~----PpL~~~P~g~~W~C~~C~ 75 (77)
T 3shb_A 29 CHLCGGRQ------DPDKQLMCDECDMAFHIYCLD----PPLSSVPSEDEWYCPECR 75 (77)
T ss_dssp BTTTCCCS------CGGGEEECTTTCCEEETTTSS----SCCSSCCSSSCCCCTTTC
T ss_pred CCccCCCC------CCcceeEeCCCCCccCcccCC----CcccCCCCCCceECcCcc
Confidence 77888743 457899999999999999999 5677 99998 9999884
No 36
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.34 E-value=3e-07 Score=83.10 Aligned_cols=47 Identities=34% Similarity=0.984 Sum_probs=41.3
Q ss_pred ccccccccccc--CCceEEcCC--CC-CccccCCCCCCCCCCCCccccccccc
Q 002944 714 ENDDLCGICMD--GGDLLCCDS--CP-RAFHIDCVSLPGIPSGTWHCRYCMNT 761 (863)
Q Consensus 714 endd~C~VC~d--gGdLL~CD~--Cp-raFH~~CL~L~~vP~G~W~C~~C~~~ 761 (863)
....+| +|++ .|+||.||. |+ ..||..|+++...|.+.|||+.|...
T Consensus 34 ~e~~yC-iC~~~~~g~MI~CD~~dC~~~WfH~~CVgl~~~p~g~W~Cp~C~~~ 85 (91)
T 1weu_A 34 NEPTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQE 85 (91)
T ss_dssp CCCBCS-TTCCBCCSCCCCCSCSSCSCCCCCSTTTTCSSCCCSSCCCTTTCCC
T ss_pred CCCcEE-ECCCCCCCCEeEecCCCCCCCCEecccCCcCcCCCCCEECcCccCc
Confidence 345778 9997 689999999 88 69999999999999999999999863
No 37
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=98.32 E-value=1.2e-07 Score=79.75 Aligned_cols=45 Identities=40% Similarity=1.046 Sum_probs=40.2
Q ss_pred cccccccccc--CCceEEcCC--CC-CccccCCCCCCCCCCCCcccccccc
Q 002944 715 NDDLCGICMD--GGDLLCCDS--CP-RAFHIDCVSLPGIPSGTWHCRYCMN 760 (863)
Q Consensus 715 ndd~C~VC~d--gGdLL~CD~--Cp-raFH~~CL~L~~vP~G~W~C~~C~~ 760 (863)
...+| +|++ .|.||.||. |+ ..||..|+++...|.|.|+|+.|..
T Consensus 10 e~~yC-~C~~~~~g~MI~CD~c~C~~~WfH~~Cvgl~~~p~~~w~Cp~C~~ 59 (62)
T 2g6q_A 10 EPTYC-LCNQVSYGEMIGCDNEQCPIEWFHFSCVSLTYKPKGKWYCPKCRG 59 (62)
T ss_dssp CCEET-TTTEECCSEEEECSCTTCSSCEEETGGGTCSSCCSSCCCCHHHHT
T ss_pred CCcEE-ECCCCCCCCeeeeeCCCCCcccEecccCCcCcCCCCCEECcCccc
Confidence 45678 8997 789999999 76 9999999999999999999999974
No 38
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.26 E-value=5.8e-07 Score=78.74 Aligned_cols=45 Identities=33% Similarity=0.763 Sum_probs=38.9
Q ss_pred cccCCCCCcCCCCCCCCceEecccccccccccccccCCCCCCC-CCCC-Ccceeeee
Q 002944 807 CVLCRGRDFCKSRFGRRTVILCDQCEREYHVGCLKDHGMEDLQ-VPQL-LVYDTISF 861 (863)
Q Consensus 807 C~ICkk~dfsks~f~~gtII~CDqCeraYHV~CLr~aGL~dLK-lPe~-~wy~~iC~ 861 (863)
|.+|++.+ ..+.+|.||.|+++||+.||. +.|. +|++ .|+++.|-
T Consensus 29 C~vC~~~~------~~~~ll~CD~C~~~yH~~Cl~----Ppl~~~P~g~~W~C~~C~ 75 (77)
T 2e6s_A 29 CRVCGGKH------EPNMQLLCDECNVAYHIYCLN----PPLDKVPEEEYWYCPSCK 75 (77)
T ss_dssp CSSSCCCC------CSTTEEECSSSCCEEETTSSS----SCCSSCCCSSCCCCTTTC
T ss_pred CcCcCCcC------CCCCEEEcCCCCccccccccC----CCccCCCCCCCcCCcCcc
Confidence 88998743 357899999999999999999 4677 9999 99999884
No 39
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=98.22 E-value=4.3e-07 Score=81.94 Aligned_cols=46 Identities=33% Similarity=0.876 Sum_probs=39.6
Q ss_pred ccccccccccc--CCceEEcCCCC---CccccCCCCCCCCCCCCccccc-ccc
Q 002944 714 ENDDLCGICMD--GGDLLCCDSCP---RAFHIDCVSLPGIPSGTWHCRY-CMN 760 (863)
Q Consensus 714 endd~C~VC~d--gGdLL~CD~Cp---raFH~~CL~L~~vP~G~W~C~~-C~~ 760 (863)
+...+| +|+. .|+||.||.|. ..||..|++|..+|.|.|||+. |..
T Consensus 24 ~~~~yC-iC~~~~~g~MI~CD~c~C~~eWfH~~CVgl~~~p~~~W~Cp~cC~~ 75 (90)
T 2jmi_A 24 QEEVYC-FCRNVSYGPMVACDNPACPFEWFHYGCVGLKQAPKGKWYCSKDCKE 75 (90)
T ss_dssp CCSCCS-TTTCCCSSSEECCCSSSCSCSCEETTTSSCSSCTTSCCCSSHHHHH
T ss_pred CCCcEE-EeCCCCCCCEEEecCCCCccccCcCccCCCCcCCCCCccCChhhcc
Confidence 345678 8995 57899999955 8999999999999999999999 874
No 40
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=98.22 E-value=4.7e-07 Score=72.55 Aligned_cols=46 Identities=30% Similarity=0.661 Sum_probs=39.0
Q ss_pred ccccCCCCCcCCCCCCCCceEecccccccccccccccCCCCCCC-CCCCCcceeeee
Q 002944 806 GCVLCRGRDFCKSRFGRRTVILCDQCEREYHVGCLKDHGMEDLQ-VPQLLVYDTISF 861 (863)
Q Consensus 806 ~C~ICkk~dfsks~f~~gtII~CDqCeraYHV~CLr~aGL~dLK-lPe~~wy~~iC~ 861 (863)
.|.+|++.+ ..+.+|.||.|+++||..|+.+ .|. +|++.|++..|-
T Consensus 2 ~C~vC~~~~------~~~~ll~Cd~C~~~~H~~Cl~p----~l~~~P~g~W~C~~C~ 48 (51)
T 1f62_A 2 RCKVCRKKG------EDDKLILCDECNKAFHLFCLRP----ALYEVPDGEWQCPACQ 48 (51)
T ss_dssp CCTTTCCSS------CCSCCEECTTTCCEECHHHHCT----TCCSCCSSCCSCTTTS
T ss_pred CCCCCCCCC------CCCCEEECCCCChhhCcccCCC----CcCCCCCCcEECcCcc
Confidence 389998853 3568999999999999999984 577 999999999884
No 41
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.20 E-value=8.6e-07 Score=72.67 Aligned_cols=45 Identities=29% Similarity=0.679 Sum_probs=38.7
Q ss_pred cCccccCCCCCcCCCCCCCCceEecccccccccccccccCCCCCCC-CCCCCcceeeee
Q 002944 804 LGGCVLCRGRDFCKSRFGRRTVILCDQCEREYHVGCLKDHGMEDLQ-VPQLLVYDTISF 861 (863)
Q Consensus 804 ~~~C~ICkk~dfsks~f~~gtII~CDqCeraYHV~CLr~aGL~dLK-lPe~~wy~~iC~ 861 (863)
...|.+|++. +.+|.||.|+++||..|+. +.|. +|++.|+|+.|-
T Consensus 9 ~~~C~vC~~~---------g~ll~Cd~C~~~~H~~Cl~----ppl~~~p~g~W~C~~C~ 54 (56)
T 2yql_A 9 EDFCSVCRKS---------GQLLMCDTCSRVYHLDCLD----PPLKTIPKGMWICPRCQ 54 (56)
T ss_dssp CCSCSSSCCS---------SCCEECSSSSCEECSSSSS----SCCCSCCCSSCCCHHHH
T ss_pred CCCCccCCCC---------CeEEEcCCCCcceECccCC----CCcCCCCCCceEChhhh
Confidence 4459999872 5799999999999999999 4677 999999999883
No 42
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=98.17 E-value=9.8e-07 Score=73.74 Aligned_cols=47 Identities=23% Similarity=0.561 Sum_probs=39.6
Q ss_pred CCcCccccCCCCCcCCCCCCCCceEecccccccccccccccCCCCCCC-CCCCCcceeeee
Q 002944 802 TELGGCVLCRGRDFCKSRFGRRTVILCDQCEREYHVGCLKDHGMEDLQ-VPQLLVYDTISF 861 (863)
Q Consensus 802 ~e~~~C~ICkk~dfsks~f~~gtII~CDqCeraYHV~CLr~aGL~dLK-lPe~~wy~~iC~ 861 (863)
.+...|.+|+. .+.+|.||.|+++||..|+. +.|. +|++.|+|+.|-
T Consensus 7 ~~~~~C~vC~~---------~g~ll~Cd~C~~~fH~~Cl~----ppl~~~p~g~W~C~~C~ 54 (61)
T 1mm2_A 7 HHMEFCRVCKD---------GGELLCCDTCPSSYHIHCLN----PPLPEIPNGEWLCPRCT 54 (61)
T ss_dssp SSCSSCTTTCC---------CSSCBCCSSSCCCBCSSSSS----SCCSSCCSSCCCCTTTT
T ss_pred CCCCcCCCCCC---------CCCEEEcCCCCHHHcccccC----CCcCcCCCCccCChhhc
Confidence 34456999986 25799999999999999999 4577 999999999884
No 43
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=98.16 E-value=9.3e-07 Score=73.33 Aligned_cols=45 Identities=29% Similarity=0.679 Sum_probs=38.6
Q ss_pred cCccccCCCCCcCCCCCCCCceEecccccccccccccccCCCCCCC-CCCCCcceeeee
Q 002944 804 LGGCVLCRGRDFCKSRFGRRTVILCDQCEREYHVGCLKDHGMEDLQ-VPQLLVYDTISF 861 (863)
Q Consensus 804 ~~~C~ICkk~dfsks~f~~gtII~CDqCeraYHV~CLr~aGL~dLK-lPe~~wy~~iC~ 861 (863)
...|.+|++. +.+|.||.|+++||..|+. +.|. +|++.|+|+.|-
T Consensus 5 ~~~C~vC~~~---------g~ll~Cd~C~~~fH~~Cl~----ppl~~~p~g~W~C~~C~ 50 (60)
T 2puy_A 5 EDFCSVCRKS---------GQLLMCDTCSRVYHLDCLD----PPLKTIPKGMWICPRCQ 50 (60)
T ss_dssp CSSCTTTCCC---------SSCEECSSSSCEECGGGSS----SCCSSCCCSCCCCHHHH
T ss_pred CCCCcCCCCC---------CcEEEcCCCCcCEECCcCC----CCcCCCCCCceEChhcc
Confidence 3459999872 5799999999999999999 4677 999999999873
No 44
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=98.16 E-value=5.7e-07 Score=76.67 Aligned_cols=43 Identities=19% Similarity=0.380 Sum_probs=37.6
Q ss_pred CccccCCCCCcCCCCCCCCceEecccccccccccccccCCCCCCC-CCCCCcceeee
Q 002944 805 GGCVLCRGRDFCKSRFGRRTVILCDQCEREYHVGCLKDHGMEDLQ-VPQLLVYDTIS 860 (863)
Q Consensus 805 ~~C~ICkk~dfsks~f~~gtII~CDqCeraYHV~CLr~aGL~dLK-lPe~~wy~~iC 860 (863)
..|.+|++ .+.+|.||.|+++||..||+ +.|. +|++-|||..|
T Consensus 13 ~~C~vC~~---------~~~ll~Cd~C~~~~H~~Cl~----P~l~~~P~g~W~C~~C 56 (66)
T 2lri_C 13 ARCGVCGD---------GTDVLRCTHCAAAFHWRCHF----PAGTSRPGTGLRCRSC 56 (66)
T ss_dssp CCCTTTSC---------CTTCEECSSSCCEECHHHHC----TTTCCCCSSSCCCTTT
T ss_pred CCcCCCCC---------CCeEEECCCCCCceecccCC----CccCcCCCCCEECccc
Confidence 34999986 35699999999999999998 5677 99999999988
No 45
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=98.15 E-value=9.8e-07 Score=74.65 Aligned_cols=46 Identities=28% Similarity=0.673 Sum_probs=39.1
Q ss_pred CcCccccCCCCCcCCCCCCCCceEecccccccccccccccCCCCCCC-CCCCCcceeeee
Q 002944 803 ELGGCVLCRGRDFCKSRFGRRTVILCDQCEREYHVGCLKDHGMEDLQ-VPQLLVYDTISF 861 (863)
Q Consensus 803 e~~~C~ICkk~dfsks~f~~gtII~CDqCeraYHV~CLr~aGL~dLK-lPe~~wy~~iC~ 861 (863)
+...|.+|+.. +.+|.||.|+++||..||. +.|. +|++.|+|+.|-
T Consensus 7 ~~~~C~vC~~~---------g~ll~CD~C~~~fH~~Cl~----ppl~~~P~g~W~C~~C~ 53 (66)
T 1xwh_A 7 NEDECAVCRDG---------GELICCDGCPRAFHLACLS----PPLREIPSGTWRCSSCL 53 (66)
T ss_dssp CCCSBSSSSCC---------SSCEECSSCCCEECTTTSS----SCCSSCCSSCCCCHHHH
T ss_pred CCCCCccCCCC---------CCEEEcCCCChhhcccccC----CCcCcCCCCCeECcccc
Confidence 34569999872 5799999999999999999 4677 999999999884
No 46
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=98.09 E-value=1.4e-06 Score=72.80 Aligned_cols=46 Identities=30% Similarity=0.617 Sum_probs=39.0
Q ss_pred CcCccccCCCCCcCCCCCCCCceEecccccccccccccccCCCCCCC-CCCCCcceeeee
Q 002944 803 ELGGCVLCRGRDFCKSRFGRRTVILCDQCEREYHVGCLKDHGMEDLQ-VPQLLVYDTISF 861 (863)
Q Consensus 803 e~~~C~ICkk~dfsks~f~~gtII~CDqCeraYHV~CLr~aGL~dLK-lPe~~wy~~iC~ 861 (863)
....|.+|++. +.+|.||.|+++||..|+.+ .|. +|++.|+|+.|-
T Consensus 10 ~~~~C~vC~~~---------g~ll~CD~C~~~fH~~Cl~p----~l~~~p~g~W~C~~C~ 56 (61)
T 2l5u_A 10 HQDYCEVCQQG---------GEIILCDTCPRAYHMVCLDP----DMEKAPEGKWSCPHCE 56 (61)
T ss_dssp CCSSCTTTSCC---------SSEEECSSSSCEEEHHHHCT----TCCSCCCSSCCCTTGG
T ss_pred CCCCCccCCCC---------CcEEECCCCChhhhhhccCC----CCCCCCCCceECcccc
Confidence 34569999872 58999999999999999994 566 999999999884
No 47
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=98.07 E-value=2.3e-06 Score=77.03 Aligned_cols=47 Identities=26% Similarity=0.515 Sum_probs=40.2
Q ss_pred CcCccccCCCCCcCCCCCCCCceEecccccccccccccccCCCCCCC-CCCCCcceeeeee
Q 002944 803 ELGGCVLCRGRDFCKSRFGRRTVILCDQCEREYHVGCLKDHGMEDLQ-VPQLLVYDTISFW 862 (863)
Q Consensus 803 e~~~C~ICkk~dfsks~f~~gtII~CDqCeraYHV~CLr~aGL~dLK-lPe~~wy~~iC~~ 862 (863)
....|.+|++. +.+|.||.|+++||..|+. +.|. +|++-|+|+.|-.
T Consensus 24 n~~~C~vC~~~---------g~LL~CD~C~~~fH~~Cl~----PpL~~~P~g~W~C~~C~~ 71 (88)
T 1fp0_A 24 SATICRVCQKP---------GDLVMCNQCEFCFHLDCHL----PALQDVPGEEWSCSLCHV 71 (88)
T ss_dssp SSSCCSSSCSS---------SCCEECTTSSCEECTTSSS----TTCCCCCSSSCCCCSCCC
T ss_pred CCCcCcCcCCC---------CCEEECCCCCCceecccCC----CCCCCCcCCCcCCccccC
Confidence 34569999872 4799999999999999998 4677 9999999999953
No 48
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=98.04 E-value=2.4e-06 Score=88.33 Aligned_cols=45 Identities=33% Similarity=0.747 Sum_probs=36.0
Q ss_pred cccCCCCCcCCCCCCCCceEecccccccccccccccCCCCCCC-CCCC-Ccceeeee
Q 002944 807 CVLCRGRDFCKSRFGRRTVILCDQCEREYHVGCLKDHGMEDLQ-VPQL-LVYDTISF 861 (863)
Q Consensus 807 C~ICkk~dfsks~f~~gtII~CDqCeraYHV~CLr~aGL~dLK-lPe~-~wy~~iC~ 861 (863)
|.+|++.+ .++.++.||.|+++||..||. +.|. +|++ -|+|+.|-
T Consensus 177 C~vC~~~~------~~~~lL~CD~C~~~yH~~CL~----PPL~~vP~G~~W~Cp~C~ 223 (226)
T 3ask_A 177 CHLCGGRQ------DPDKQLMCDECDMAFHIYCLD----PPLSSVPSEDEWYCPECR 223 (226)
T ss_dssp CSSSCCCC------C--CCEECSSSCCEECSCC------CCCCSCCSSSCCCCGGGC
T ss_pred CcCCCCCC------CCCCeEEcCCCCcceeCccCC----CCcccCCCCCCCCCcCCc
Confidence 88998743 357899999999999999999 5788 9999 99999984
No 49
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.02 E-value=1.8e-06 Score=77.66 Aligned_cols=47 Identities=26% Similarity=0.585 Sum_probs=39.8
Q ss_pred CccccCCCCCcCCCCCCCCceEecccccccccccccccCCCCCCC-CCCCCcceeeee
Q 002944 805 GGCVLCRGRDFCKSRFGRRTVILCDQCEREYHVGCLKDHGMEDLQ-VPQLLVYDTISF 861 (863)
Q Consensus 805 ~~C~ICkk~dfsks~f~~gtII~CDqCeraYHV~CLr~aGL~dLK-lPe~~wy~~iC~ 861 (863)
..|.+|++.+ ....+|.||.|+++||..||. +.|. +|++.|||+.|-
T Consensus 17 ~~C~vC~~~~------~~~~ll~CD~C~~~~H~~Cl~----Ppl~~~P~g~W~C~~C~ 64 (92)
T 2e6r_A 17 YICQVCSRGD------EDDKLLFCDGCDDNYHIFCLL----PPLPEIPRGIWRCPKCI 64 (92)
T ss_dssp CCCSSSCCSG------GGGGCEECTTTCCEECSSSSS----SCCSSCCSSCCCCHHHH
T ss_pred CCCccCCCcC------CCCCEEEcCCCCchhccccCC----CCcccCCCCCcCCccCc
Confidence 4599999843 246899999999999999998 4677 999999999884
No 50
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=97.93 E-value=4.3e-06 Score=75.92 Aligned_cols=43 Identities=40% Similarity=1.011 Sum_probs=35.1
Q ss_pred cccccccCCceEEcCCCCCccccCCCCCC--CCCCCCccccccccc
Q 002944 718 LCGICMDGGDLLCCDSCPRAFHIDCVSLP--GIPSGTWHCRYCMNT 761 (863)
Q Consensus 718 ~C~VC~dgGdLL~CD~CpraFH~~CL~L~--~vP~G~W~C~~C~~~ 761 (863)
+|..+.++|.||+||.|++.||..|++++ .+| ..|+|+.|+..
T Consensus 32 iC~~~~~~~~mi~Cd~C~~w~H~~C~~~~~~~~p-~~w~C~~C~~~ 76 (98)
T 2lv9_A 32 ICGFTHDDGYMICCDKCSVWQHIDCMGIDRQHIP-DTYLCERCQPR 76 (98)
T ss_dssp TTSCCSCSSCEEEBTTTCBEEETTTTTCCTTSCC-SSBCCTTTSSS
T ss_pred ECCCccCCCcEEEcCCCCCcCcCcCCCCCccCCC-CCEECCCCcCC
Confidence 45555667899999999999999999865 455 48999999853
No 51
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=97.79 E-value=1.1e-05 Score=72.04 Aligned_cols=53 Identities=25% Similarity=0.519 Sum_probs=39.4
Q ss_pred CccccCCCCCcCCCCCCCCceEecccccccccccccccCCCCCC-CCCCCCcceeeee
Q 002944 805 GGCVLCRGRDFCKSRFGRRTVILCDQCEREYHVGCLKDHGMEDL-QVPQLLVYDTISF 861 (863)
Q Consensus 805 ~~C~ICkk~dfsks~f~~gtII~CDqCeraYHV~CLr~aGL~dL-KlPe~~wy~~iC~ 861 (863)
..|.+|+..+. ...+.+|+||.|+++||..|+.+.-.... ++|++.|+|..|-
T Consensus 17 ~~C~vC~~~~~----~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~ 70 (88)
T 1wev_A 17 LACVVCRQMTV----ASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCT 70 (88)
T ss_dssp CSCSSSCCCCC----CTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHH
T ss_pred CcCCCCCCCCC----CCCCceEECCCCCCeEcCccCCCcccccccCCCCCCeeCcccc
Confidence 45999998531 12468999999999999999994222111 2799999999884
No 52
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=97.75 E-value=1.3e-05 Score=69.11 Aligned_cols=50 Identities=18% Similarity=0.403 Sum_probs=39.9
Q ss_pred CcCccccCCCCCcCCCCCCCCceEecccccccccccccccCCCCCCCCCCCCcceeeee
Q 002944 803 ELGGCVLCRGRDFCKSRFGRRTVILCDQCEREYHVGCLKDHGMEDLQVPQLLVYDTISF 861 (863)
Q Consensus 803 e~~~C~ICkk~dfsks~f~~gtII~CDqCeraYHV~CLr~aGL~dLKlPe~~wy~~iC~ 861 (863)
....|.+|++.+ ....+.+|.||.|+++||..|+.+. .+|++-|||..|-
T Consensus 15 ~~~~C~vC~~~~----s~~~~~ll~CD~C~~~~H~~Cl~~~-----~vP~g~W~C~~C~ 64 (71)
T 2ku3_A 15 EDAVCSICMDGE----SQNSNVILFCDMCNLAVHQECYGVP-----YIPEGQWLCRHCL 64 (71)
T ss_dssp SSCSCSSSCCCC----CCSSSCEEECSSSCCEEEHHHHTCS-----SCCSSCCCCHHHH
T ss_pred CCCCCCCCCCCC----CCCCCCEEECCCCCCccccccCCCC-----cCCCCCcCCccCc
Confidence 345699998853 1245789999999999999999843 1799999999873
No 53
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=97.74 E-value=1.1e-05 Score=69.25 Aligned_cols=48 Identities=21% Similarity=0.351 Sum_probs=38.5
Q ss_pred cCccccCCCCCcCCCCCCCCceEecccccccccccccccCCCCCCC-CCCCCcceeeee
Q 002944 804 LGGCVLCRGRDFCKSRFGRRTVILCDQCEREYHVGCLKDHGMEDLQ-VPQLLVYDTISF 861 (863)
Q Consensus 804 ~~~C~ICkk~dfsks~f~~gtII~CDqCeraYHV~CLr~aGL~dLK-lPe~~wy~~iC~ 861 (863)
...|.+|++.+ .+..+|+||.|+++||..|+.. .+. +|.+.|+|+.|.
T Consensus 18 ~~~C~~C~~~~------~~~~mi~CD~C~~wfH~~Cv~~----~~~~~~~~~w~C~~C~ 66 (75)
T 2k16_A 18 IWICPGCNKPD------DGSPMIGCDDCDDWYHWPCVGI----MAAPPEEMQWFCPKCA 66 (75)
T ss_dssp EECBTTTTBCC------SSCCEEECSSSSSEEEHHHHTC----SSCCCSSSCCCCTTTH
T ss_pred CcCCCCCCCCC------CCCCEEEcCCCCcccccccCCC----CccCCCCCCEEChhcc
Confidence 34599999864 2357999999999999999983 344 788999999884
No 54
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.71 E-value=7e-06 Score=70.63 Aligned_cols=46 Identities=33% Similarity=0.827 Sum_probs=38.5
Q ss_pred cccccccccc--CCceEEcCCCC---CccccCCCCCCCCCCCCccccccccc
Q 002944 715 NDDLCGICMD--GGDLLCCDSCP---RAFHIDCVSLPGIPSGTWHCRYCMNT 761 (863)
Q Consensus 715 ndd~C~VC~d--gGdLL~CD~Cp---raFH~~CL~L~~vP~G~W~C~~C~~~ 761 (863)
...+|. |+. .|.||.||.|+ ..||..|+++...|.+.|+|+.|...
T Consensus 5 ~~~yC~-C~~~~~g~MI~CD~cdC~~~WfH~~Cvgl~~~p~~~w~Cp~C~~~ 55 (70)
T 1x4i_A 5 SSGYCI-CNQVSYGEMVGCDNQDCPIEWFHYGCVGLTEAPKGKWYCPQCTAA 55 (70)
T ss_dssp CCCCST-TSCCCCSSEECCSCTTCSCCCEEHHHHTCSSCCSSCCCCHHHHHH
T ss_pred CCeEEE-cCCCCCCCEeEeCCCCCCccCCcccccccCcCCCCCEECCCCCcc
Confidence 345674 774 56999999964 89999999999999999999999864
No 55
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=97.71 E-value=2.1e-05 Score=71.43 Aligned_cols=45 Identities=24% Similarity=0.514 Sum_probs=36.0
Q ss_pred cCccccCCCCCcCCCCCCCCceEecccccccccccccccCCCCCCC-CCCCCcceeee
Q 002944 804 LGGCVLCRGRDFCKSRFGRRTVILCDQCEREYHVGCLKDHGMEDLQ-VPQLLVYDTIS 860 (863)
Q Consensus 804 ~~~C~ICkk~dfsks~f~~gtII~CDqCeraYHV~CLr~aGL~dLK-lPe~~wy~~iC 860 (863)
...| +|+..+ ..+.+|+||.|.++||..|+.. .+. +|+ .|+|+.|
T Consensus 28 ~vrC-iC~~~~------~~~~mi~Cd~C~~w~H~~C~~~----~~~~~p~-~w~C~~C 73 (98)
T 2lv9_A 28 VTRC-ICGFTH------DDGYMICCDKCSVWQHIDCMGI----DRQHIPD-TYLCERC 73 (98)
T ss_dssp BCCC-TTSCCS------CSSCEEEBTTTCBEEETTTTTC----CTTSCCS-SBCCTTT
T ss_pred CEEe-ECCCcc------CCCcEEEcCCCCCcCcCcCCCC----CccCCCC-CEECCCC
Confidence 3458 798753 3578999999999999999973 455 886 6999888
No 56
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=97.70 E-value=1.9e-05 Score=66.15 Aligned_cols=50 Identities=18% Similarity=0.453 Sum_probs=39.5
Q ss_pred cCccccCCCCCcCCCCCCCCceEecccccccccccccccCCCCCCC---C-CCCCcceeeee
Q 002944 804 LGGCVLCRGRDFCKSRFGRRTVILCDQCEREYHVGCLKDHGMEDLQ---V-PQLLVYDTISF 861 (863)
Q Consensus 804 ~~~C~ICkk~dfsks~f~~gtII~CDqCeraYHV~CLr~aGL~dLK---l-Pe~~wy~~iC~ 861 (863)
...|.+|+..+. ...+.+|+||.|+++||..|+.+ .|. + |++.|+|..|-
T Consensus 6 ~~~C~vC~~~~~----~~~~~ll~Cd~C~~~~H~~C~~p----~l~~~~~~p~~~W~C~~C~ 59 (66)
T 2yt5_A 6 SGVCTICQEEYS----EAPNEMVICDKCGQGYHQLCHTP----HIDSSVIDSDEKWLCRQCV 59 (66)
T ss_dssp CCCBSSSCCCCC----BTTBCEEECSSSCCEEETTTSSS----CCCHHHHHSSCCCCCHHHH
T ss_pred CCCCCCCCCCCC----CCCCCEEECCCCChHHHhhhCCC----cccccccCCCCCEECCCCc
Confidence 345999997431 23578999999999999999995 444 3 99999999884
No 57
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=97.55 E-value=2.6e-05 Score=69.69 Aligned_cols=50 Identities=18% Similarity=0.414 Sum_probs=39.7
Q ss_pred CcCccccCCCCCcCCCCCCCCceEecccccccccccccccCCCCCCCCCCCCcceeeee
Q 002944 803 ELGGCVLCRGRDFCKSRFGRRTVILCDQCEREYHVGCLKDHGMEDLQVPQLLVYDTISF 861 (863)
Q Consensus 803 e~~~C~ICkk~dfsks~f~~gtII~CDqCeraYHV~CLr~aGL~dLKlPe~~wy~~iC~ 861 (863)
....|.+|+..+ ....+.+|.||.|+++||..|+.+. + +|++.|||..|-
T Consensus 24 ~~~~C~vC~~~~----s~~~~~ll~CD~C~~~fH~~Cl~p~----~-vP~g~W~C~~C~ 73 (88)
T 2l43_A 24 EDAVCSICMDGE----SQNSNVILFCDMCNLAVHQECYGVP----Y-IPEGQWLCRHCL 73 (88)
T ss_dssp CCCCCSSCCSSS----SCSEEEEEECSSSCCCCCHHHHTCS----S-CCSSCCCCHHHH
T ss_pred CCCcCCcCCCCC----CCCCCCEEECCCCCchhhcccCCCC----c-cCCCceECcccc
Confidence 345699998743 1235689999999999999999853 2 799999999884
No 58
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=97.46 E-value=7.8e-05 Score=64.29 Aligned_cols=45 Identities=27% Similarity=0.500 Sum_probs=36.9
Q ss_pred CcCccccCCCCCcCCCCCCCCceEeccc--cc-ccccccccccCCCCCCC-CCCCCcceeeee
Q 002944 803 ELGGCVLCRGRDFCKSRFGRRTVILCDQ--CE-REYHVGCLKDHGMEDLQ-VPQLLVYDTISF 861 (863)
Q Consensus 803 e~~~C~ICkk~dfsks~f~~gtII~CDq--Ce-raYHV~CLr~aGL~dLK-lPe~~wy~~iC~ 861 (863)
....| +|++.+ .+.||.||. |+ .+||..|+. |. +|++.|||+.|-
T Consensus 15 ~~~~C-~C~~~~-------~g~MI~CD~~~C~~~wfH~~Cvg------l~~~p~g~w~Cp~C~ 63 (71)
T 1wen_A 15 EPTYC-LCHQVS-------YGEMIGCDNPDCSIEWFHFACVG------LTTKPRGKWFCPRCS 63 (71)
T ss_dssp SCCCS-TTCCCS-------CSSEECCSCSSCSCCCEETTTTT------CSSCCSSCCCCTTTS
T ss_pred CCCEE-ECCCCC-------CCCEeEeeCCCCCCccEecccCC------cCcCCCCCEECCCCC
Confidence 34569 799864 257999999 88 699999997 56 899999999885
No 59
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=97.43 E-value=4e-05 Score=63.84 Aligned_cols=44 Identities=25% Similarity=0.513 Sum_probs=36.0
Q ss_pred cCccccCCCCCcCCCCCCCCceEeccc--cc-ccccccccccCCCCCCC-CCCCCcceeeee
Q 002944 804 LGGCVLCRGRDFCKSRFGRRTVILCDQ--CE-REYHVGCLKDHGMEDLQ-VPQLLVYDTISF 861 (863)
Q Consensus 804 ~~~C~ICkk~dfsks~f~~gtII~CDq--Ce-raYHV~CLr~aGL~dLK-lPe~~wy~~iC~ 861 (863)
...| +|++.+ .+.||.||. |+ .+||..|+. |. .|.+.|||+.|-
T Consensus 9 ~~yC-~C~~~~-------~g~mi~CD~~~C~~~wfH~~Cvg------l~~~p~~~w~Cp~C~ 56 (59)
T 3c6w_A 9 PTYC-LCHQVS-------YGEMIGCDNPDCPIEWFHFACVD------LTTKPKGKWFCPRCV 56 (59)
T ss_dssp CEET-TTTEEC-------CSEEEECSCTTCSSCEEETGGGT------CSSCCSSCCCCHHHH
T ss_pred CcEE-ECCCCC-------CCCeeEeeCCCCCCCCEecccCC------cccCCCCCEECcCcc
Confidence 3458 899864 257999999 88 699999998 56 899999999873
No 60
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=97.37 E-value=1.5e-05 Score=77.91 Aligned_cols=47 Identities=26% Similarity=0.589 Sum_probs=38.3
Q ss_pred cccccccccccC----CceEEcCCCCCccccCCCCCCCC---CCCCccccccccc
Q 002944 714 ENDDLCGICMDG----GDLLCCDSCPRAFHIDCVSLPGI---PSGTWHCRYCMNT 761 (863)
Q Consensus 714 endd~C~VC~dg----GdLL~CD~CpraFH~~CL~L~~v---P~G~W~C~~C~~~ 761 (863)
++..+| +|+.+ |.++.||.|++.||..|+++... +.+.|+|+.|+..
T Consensus 6 ~~~~~C-~C~~~~~~~~~mi~Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~~~ 59 (174)
T 2ri7_A 6 DTKLYC-ICKTPEDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQST 59 (174)
T ss_dssp -CCEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHHHH
T ss_pred CCCcEe-eCCCCCCCCCCEeECCCCCchhChhhcCCchhhccCccCeecCCCcch
Confidence 456789 99974 46999999999999999997643 3689999999863
No 61
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=97.37 E-value=8.8e-05 Score=61.82 Aligned_cols=48 Identities=29% Similarity=0.718 Sum_probs=39.7
Q ss_pred cccccccccccc----CCceEEcCCCCCccccCCCCCCCCC---CCCcccccccc
Q 002944 713 KENDDLCGICMD----GGDLLCCDSCPRAFHIDCVSLPGIP---SGTWHCRYCMN 760 (863)
Q Consensus 713 ~endd~C~VC~d----gGdLL~CD~CpraFH~~CL~L~~vP---~G~W~C~~C~~ 760 (863)
.++..+|.+|+. ++.+|.||.|..-||..|+++...+ ...|+|+.|..
T Consensus 3 ~~e~~~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~ 57 (64)
T 1we9_A 3 SGSSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSN 57 (64)
T ss_dssp CSSCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHT
T ss_pred CCCCCCCCCCCCccCCCCCEEEccCCCCCCCccccCcChhHhcCCCcEECCCCcC
Confidence 345678999985 3579999999999999999987553 37899999986
No 62
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=97.35 E-value=0.00012 Score=67.82 Aligned_cols=44 Identities=25% Similarity=0.507 Sum_probs=37.1
Q ss_pred CcCccccCCCCCcCCCCCCCCceEecc--cccccccccccccCCCCCCC-CCCCCcceeeee
Q 002944 803 ELGGCVLCRGRDFCKSRFGRRTVILCD--QCEREYHVGCLKDHGMEDLQ-VPQLLVYDTISF 861 (863)
Q Consensus 803 e~~~C~ICkk~dfsks~f~~gtII~CD--qCeraYHV~CLr~aGL~dLK-lPe~~wy~~iC~ 861 (863)
....|.+|+. .+.||.|| .|+++||..||. |. +|++.||++-|.
T Consensus 14 ~~~~C~~C~~---------~G~ll~CD~~~Cp~~fH~~Cl~------L~~~P~g~W~Cp~c~ 60 (107)
T 4gne_A 14 HEDYCFQCGD---------GGELVMCDKKDCPKAYHLLCLN------LTQPPYGKWECPWHQ 60 (107)
T ss_dssp SCSSCTTTCC---------CSEEEECCSTTCCCEECTGGGT------CSSCCSSCCCCGGGB
T ss_pred CCCCCCcCCC---------CCcEeEECCCCCCcccccccCc------CCcCCCCCEECCCCC
Confidence 3456999985 36899999 899999999996 67 999999999663
No 63
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=97.35 E-value=8.4e-05 Score=67.21 Aligned_cols=45 Identities=27% Similarity=0.500 Sum_probs=37.2
Q ss_pred CcCccccCCCCCcCCCCCCCCceEeccc--cc-ccccccccccCCCCCCC-CCCCCcceeeee
Q 002944 803 ELGGCVLCRGRDFCKSRFGRRTVILCDQ--CE-REYHVGCLKDHGMEDLQ-VPQLLVYDTISF 861 (863)
Q Consensus 803 e~~~C~ICkk~dfsks~f~~gtII~CDq--Ce-raYHV~CLr~aGL~dLK-lPe~~wy~~iC~ 861 (863)
....| +|++.+ .+.||.||. |+ .|||..|+. |. .|.+.|||+.|-
T Consensus 35 e~~yC-iC~~~~-------~g~MI~CD~~dC~~~WfH~~CVg------l~~~p~g~W~Cp~C~ 83 (91)
T 1weu_A 35 EPTYC-LCHQVS-------YGEMIGCDNPDCSIEWFHFACVG------LTTKPRGKWFCPRCS 83 (91)
T ss_dssp CCBCS-TTCCBC-------CSCCCCCSCSSCSCCCCCSTTTT------CSSCCCSSCCCTTTC
T ss_pred CCcEE-ECCCCC-------CCCEeEecCCCCCCCCEecccCC------cCcCCCCCEECcCcc
Confidence 44568 999864 257999999 87 799999997 56 899999999985
No 64
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=97.35 E-value=5.8e-05 Score=62.96 Aligned_cols=44 Identities=25% Similarity=0.484 Sum_probs=35.9
Q ss_pred cCccccCCCCCcCCCCCCCCceEeccc--cc-ccccccccccCCCCCCC-CCCCCcceeeee
Q 002944 804 LGGCVLCRGRDFCKSRFGRRTVILCDQ--CE-REYHVGCLKDHGMEDLQ-VPQLLVYDTISF 861 (863)
Q Consensus 804 ~~~C~ICkk~dfsks~f~~gtII~CDq--Ce-raYHV~CLr~aGL~dLK-lPe~~wy~~iC~ 861 (863)
...| +|++.+ .+.||.||. |+ .+||..|+. |. +|++.|||+.|-
T Consensus 10 ~~~C-~C~~~~-------~g~mi~CD~cdC~~~wfH~~Cvg------l~~~p~g~w~C~~C~ 57 (60)
T 2vnf_A 10 PTYC-LCHQVS-------YGEMIGCDNPDCSIEWFHFACVG------LTTKPRGKWFCPRCS 57 (60)
T ss_dssp CEET-TTTEEC-------CSEEEECSCTTCSSCEEETGGGT------CSSCCSSCCCCHHHH
T ss_pred CCEE-ECCCcC-------CCCEEEeCCCCCCCceEehhcCC------CCcCCCCCEECcCcc
Confidence 3458 899864 267999999 77 799999998 66 899999999874
No 65
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=97.27 E-value=0.00013 Score=65.92 Aligned_cols=44 Identities=27% Similarity=0.541 Sum_probs=35.7
Q ss_pred CcCccccCCCCCcCCCCCCCCceEeccccc---ccccccccccCCCCCCC-CCCCCcceee-e
Q 002944 803 ELGGCVLCRGRDFCKSRFGRRTVILCDQCE---REYHVGCLKDHGMEDLQ-VPQLLVYDTI-S 860 (863)
Q Consensus 803 e~~~C~ICkk~dfsks~f~~gtII~CDqCe---raYHV~CLr~aGL~dLK-lPe~~wy~~i-C 860 (863)
....| +|++.+ .+.||.||.|. .|||..|+. |. .|.+.|||+. |
T Consensus 25 ~~~yC-iC~~~~-------~g~MI~CD~c~C~~eWfH~~CVg------l~~~p~~~W~Cp~cC 73 (90)
T 2jmi_A 25 EEVYC-FCRNVS-------YGPMVACDNPACPFEWFHYGCVG------LKQAPKGKWYCSKDC 73 (90)
T ss_dssp CSCCS-TTTCCC-------SSSEECCCSSSCSCSCEETTTSS------CSSCTTSCCCSSHHH
T ss_pred CCcEE-EeCCCC-------CCCEEEecCCCCccccCcCccCC------CCcCCCCCccCChhh
Confidence 45568 899864 24699999965 899999997 56 8999999998 6
No 66
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=97.27 E-value=8.1e-05 Score=62.66 Aligned_cols=44 Identities=27% Similarity=0.505 Sum_probs=35.7
Q ss_pred cCccccCCCCCcCCCCCCCCceEeccc--cc-ccccccccccCCCCCCC-CCCCCcceeeee
Q 002944 804 LGGCVLCRGRDFCKSRFGRRTVILCDQ--CE-REYHVGCLKDHGMEDLQ-VPQLLVYDTISF 861 (863)
Q Consensus 804 ~~~C~ICkk~dfsks~f~~gtII~CDq--Ce-raYHV~CLr~aGL~dLK-lPe~~wy~~iC~ 861 (863)
...| +|++.+ .+.||.||. |+ .+||..|+. |. .|.+.|||+.|-
T Consensus 11 ~~yC-~C~~~~-------~g~MI~CD~c~C~~~WfH~~Cvg------l~~~p~~~w~Cp~C~ 58 (62)
T 2g6q_A 11 PTYC-LCNQVS-------YGEMIGCDNEQCPIEWFHFSCVS------LTYKPKGKWYCPKCR 58 (62)
T ss_dssp CEET-TTTEEC-------CSEEEECSCTTCSSCEEETGGGT------CSSCCSSCCCCHHHH
T ss_pred CcEE-ECCCCC-------CCCeeeeeCCCCCcccEecccCC------cCcCCCCCEECcCcc
Confidence 3458 899853 257999999 66 999999998 55 799999999884
No 67
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=97.25 E-value=6.4e-05 Score=69.15 Aligned_cols=103 Identities=17% Similarity=0.275 Sum_probs=59.6
Q ss_pred ccccccccCCceEEcCCCCCccccCCCCCCCCCCCCcccccccccccchhhhhccccccccCcccccCchhccccccccc
Q 002944 717 DLCGICMDGGDLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYCMNTFQKEKFVEYNANARAAGRIEGVDPFAQMVSRCIRI 796 (863)
Q Consensus 717 d~C~VC~dgGdLL~CD~CpraFH~~CL~L~~vP~G~W~C~~C~~~~~keKfve~n~nava~Gri~GvdPieQi~kRC~RI 796 (863)
.+|.+|+... |+.|...||+.|++.+ .|.|..|......... -+ .
T Consensus 8 ~~C~~C~~~~----C~~C~~c~~~~~~~~~-----~~~~~~c~~~~~~~~~----------------~~---~------- 52 (117)
T 4bbq_A 8 RKCKACVQGE----CGVCHYCRDMKKFGGP-----GRMKQSCVLRQCLAPR----------------LP---H------- 52 (117)
T ss_dssp SCSHHHHSCC----CSCSHHHHHSGGGTSC-----CCSCCCCGGGCCSSCB----------------CC---T-------
T ss_pred CcCcCcCCcC----CCCCCCCcCCcccCCC-----Cccccchhheeecccc----------------cc---c-------
Confidence 4577777653 9999999999998743 5888888642111000 00 0
Q ss_pred ccCCCCCcCccccCCCCCcCCCCCCCCceEecccccccccccccccCCCCCCC--CCCCCcceeeee
Q 002944 797 VQTPDTELGGCVLCRGRDFCKSRFGRRTVILCDQCEREYHVGCLKDHGMEDLQ--VPQLLVYDTISF 861 (863)
Q Consensus 797 vk~~~~e~~~C~ICkk~dfsks~f~~gtII~CDqCeraYHV~CLr~aGL~dLK--lPe~~wy~~iC~ 861 (863)
...-..|..|...+.. .-.+..+|+|+.|+.+||..|+....-..+. +|+ .|.++.|.
T Consensus 53 ----~~~c~~c~~c~~c~~~--~~~~~~m~~C~~C~~~~H~~C~~~~~~~~~~~~~~~-~~~C~~C~ 112 (117)
T 4bbq_A 53 ----SVTCSLCGEVDQNEET--QDFEKKLMECCICNEIVHPGCLQMDGEGLLNEELPN-CWECPKCY 112 (117)
T ss_dssp ----TCBCTTTCCBCCHHHH--CCGGGSCEEETTTCCEECGGGCCSCCCCEECSSSSS-EEECTTTC
T ss_pred ----cccccccCcccccccc--cccCcceEEeeecCCeEECCCCCCCccccccccCCC-CeECCCCc
Confidence 0001112233221111 1123468999999999999999854322232 444 58888774
No 68
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=97.14 E-value=8.9e-05 Score=68.20 Aligned_cols=45 Identities=33% Similarity=0.904 Sum_probs=38.4
Q ss_pred ccccccccC----CceEEcC-CCCCccccCCCCCCC--------CCCCCccccccccc
Q 002944 717 DLCGICMDG----GDLLCCD-SCPRAFHIDCVSLPG--------IPSGTWHCRYCMNT 761 (863)
Q Consensus 717 d~C~VC~dg----GdLL~CD-~CpraFH~~CL~L~~--------vP~G~W~C~~C~~~ 761 (863)
..|.+|+.+ +.++.|| .|..-||..|++++. .|.+.|+|+.|...
T Consensus 4 ~~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~ 61 (105)
T 2xb1_A 4 YPCGACRSEVNDDQDAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCLKT 61 (105)
T ss_dssp CBCTTTCSBCCTTSCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHT
T ss_pred CCCCCCCCccCCCCCEEEecCCcccccccccCCcCHHHHHhhccCCCCCEECccccCc
Confidence 569999976 5799997 999999999999874 46789999999863
No 69
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=97.11 E-value=0.00016 Score=64.70 Aligned_cols=48 Identities=33% Similarity=0.861 Sum_probs=40.1
Q ss_pred ccccccccccc--cCCceEEcCCCCCccccCCCC--------------CCCCCCCCcccccccc
Q 002944 713 KENDDLCGICM--DGGDLLCCDSCPRAFHIDCVS--------------LPGIPSGTWHCRYCMN 760 (863)
Q Consensus 713 ~endd~C~VC~--dgGdLL~CD~CpraFH~~CL~--------------L~~vP~G~W~C~~C~~ 760 (863)
..+|+.|.||. ..++|+.|..|.|.||..||. +...+...|.|+.|.+
T Consensus 12 ~~~D~~C~VC~~~t~~~l~pCRvC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~Cen 75 (89)
T 1wil_A 12 VVNDEMCDVCEVWTAESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDN 75 (89)
T ss_dssp CCCSCCCTTTCCCCSSCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCC
T ss_pred CCCCcccCccccccccceeccccccccccHhhcccccccccHHHHHHHHccCCCCCccccccch
Confidence 45889999999 678999999999999999992 1133578999999976
No 70
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=96.93 E-value=0.00057 Score=58.40 Aligned_cols=46 Identities=26% Similarity=0.475 Sum_probs=34.5
Q ss_pred cCccccCCCCCcCCCCCCCCceEecccccccccccccccCCCCCCCCCCCCcceeee
Q 002944 804 LGGCVLCRGRDFCKSRFGRRTVILCDQCEREYHVGCLKDHGMEDLQVPQLLVYDTIS 860 (863)
Q Consensus 804 ~~~C~ICkk~dfsks~f~~gtII~CDqCeraYHV~CLr~aGL~dLKlPe~~wy~~iC 860 (863)
...| +|++++ ..+.+|+||.|..|||..|+.-.. -.+| +.|+|+.|
T Consensus 19 ~~~C-iC~~~~------~~~~MIqCd~C~~WfH~~Cvgi~~---~~~~-~~~~C~~C 64 (68)
T 3o70_A 19 LVTC-FCMKPF------AGRPMIECNECHTWIHLSCAKIRK---SNVP-EVFVCQKC 64 (68)
T ss_dssp CCCS-TTCCCC------TTCCEEECTTTCCEEETTTTTCCT---TSCC-SSCCCHHH
T ss_pred ceEe-ECCCcC------CCCCEEECCCCCccccccccCcCc---ccCC-CcEECCCC
Confidence 4558 999864 246799999999999999998321 1256 57888877
No 71
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=96.93 E-value=0.00042 Score=58.85 Aligned_cols=44 Identities=27% Similarity=0.774 Sum_probs=34.3
Q ss_pred ccccccccc---CCceEEcCC--CCCccccCCCCCCCCCC------CCcccccccc
Q 002944 716 DDLCGICMD---GGDLLCCDS--CPRAFHIDCVSLPGIPS------GTWHCRYCMN 760 (863)
Q Consensus 716 dd~C~VC~d---gGdLL~CD~--CpraFH~~CL~L~~vP~------G~W~C~~C~~ 760 (863)
.-+| +|+. .|.||.||. |..-||..|+++...|. ..|+|+.|+.
T Consensus 10 ~v~C-~C~~~~~~g~mI~CD~~~C~~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr~ 64 (68)
T 2rsd_A 10 KVRC-ICSSTMVNDSMIQCEDQRCQVWQHLNCVLIPDKPGESAEVPPVFYCELCRL 64 (68)
T ss_dssp EECC-TTCCCSCCSCEEECSCTTTCEEEETTTSCCCSSTTSCCCCCSSCCCHHHHH
T ss_pred CEEe-ECCCCcCCCCEEEECCCCCCCeEchhhCCCCcccccccCCCCcEECcCccC
Confidence 3456 6764 478999995 99999999999765442 3799999984
No 72
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.91 E-value=0.00032 Score=60.31 Aligned_cols=44 Identities=25% Similarity=0.521 Sum_probs=34.9
Q ss_pred cCccccCCCCCcCCCCCCCCceEeccccc---ccccccccccCCCCCCC-CCCCCcceeeee
Q 002944 804 LGGCVLCRGRDFCKSRFGRRTVILCDQCE---REYHVGCLKDHGMEDLQ-VPQLLVYDTISF 861 (863)
Q Consensus 804 ~~~C~ICkk~dfsks~f~~gtII~CDqCe---raYHV~CLr~aGL~dLK-lPe~~wy~~iC~ 861 (863)
...|+ |++.+ .+.||.||.|+ .|||..|+. |. .|.+.|||+.|-
T Consensus 6 ~~yC~-C~~~~-------~g~MI~CD~cdC~~~WfH~~Cvg------l~~~p~~~w~Cp~C~ 53 (70)
T 1x4i_A 6 SGYCI-CNQVS-------YGEMVGCDNQDCPIEWFHYGCVG------LTEAPKGKWYCPQCT 53 (70)
T ss_dssp CCCST-TSCCC-------CSSEECCSCTTCSCCCEEHHHHT------CSSCCSSCCCCHHHH
T ss_pred CeEEE-cCCCC-------CCCEeEeCCCCCCccCCcccccc------cCcCCCCCEECCCCC
Confidence 34584 98853 24899999974 899999998 55 799999999873
No 73
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=96.91 E-value=0.00061 Score=58.31 Aligned_cols=51 Identities=20% Similarity=0.348 Sum_probs=36.0
Q ss_pred CCCcCccccCCCCCcCCCCCCCCceEecccccccccccccccCCCCCCC-CCCCCcceeeee
Q 002944 801 DTELGGCVLCRGRDFCKSRFGRRTVILCDQCEREYHVGCLKDHGMEDLQ-VPQLLVYDTISF 861 (863)
Q Consensus 801 ~~e~~~C~ICkk~dfsks~f~~gtII~CDqCeraYHV~CLr~aGL~dLK-lPe~~wy~~iC~ 861 (863)
+.+...| +|++++. ....+|+||.|..|||..|+.- ...+ +| ..|+|+.|-
T Consensus 13 ~~~~~~C-~C~~~~~-----~g~~mI~Cd~C~~W~H~~Cvg~---~~~~~~~-~~~~C~~C~ 64 (72)
T 1wee_A 13 DNWKVDC-KCGTKDD-----DGERMLACDGCGVWHHTRCIGI---NNADALP-SKFLCFRCI 64 (72)
T ss_dssp CSSEECC-TTCCCSC-----CSSCEEECSSSCEEEETTTTTC---CTTSCCC-SCCCCHHHH
T ss_pred CCcceEe-eCCCccC-----CCCcEEECCCCCCccCCeeecc---CccccCC-CcEECCCcc
Confidence 3445669 6998631 2347999999999999999973 2223 45 678888773
No 74
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=96.90 E-value=0.00051 Score=57.22 Aligned_cols=50 Identities=22% Similarity=0.323 Sum_probs=34.7
Q ss_pred CcCccccCCCCCcCCCCCCCCceEecccccccccccccccCCCCCCCCC-CCCcceeee
Q 002944 803 ELGGCVLCRGRDFCKSRFGRRTVILCDQCEREYHVGCLKDHGMEDLQVP-QLLVYDTIS 860 (863)
Q Consensus 803 e~~~C~ICkk~dfsks~f~~gtII~CDqCeraYHV~CLr~aGL~dLKlP-e~~wy~~iC 860 (863)
+...|.+|+++.. ..+.+|+||.|+.|||..|+. +....++ ...|+|+.|
T Consensus 5 e~~~C~~C~~~~~-----~~~~mI~Cd~C~~WfH~~Cvg---l~~~~~~~~~~~~C~~C 55 (64)
T 1we9_A 5 SSGQCGACGESYA-----ADEFWICCDLCEMWFHGKCVK---ITPARAEHIKQYKCPSC 55 (64)
T ss_dssp SCCCCSSSCCCCC-----SSSCEEECSSSCCEEETTTTT---CCTTGGGGCSSCCCHHH
T ss_pred CCCCCCCCCCccC-----CCCCEEEccCCCCCCCccccC---cChhHhcCCCcEECCCC
Confidence 3456999998642 246899999999999999997 2211122 256777776
No 75
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=96.87 E-value=0.00055 Score=58.50 Aligned_cols=47 Identities=19% Similarity=0.586 Sum_probs=36.7
Q ss_pred ccccccccccccC---CceEEcCCCCCccccCCCCCCCC-CCCCcccccccc
Q 002944 713 KENDDLCGICMDG---GDLLCCDSCPRAFHIDCVSLPGI-PSGTWHCRYCMN 760 (863)
Q Consensus 713 ~endd~C~VC~dg---GdLL~CD~CpraFH~~CL~L~~v-P~G~W~C~~C~~ 760 (863)
....-+| +|+.. +.+|.||.|..-||..|+++... ....|+|+.|..
T Consensus 16 ~~~~~~C-iC~~~~~~~~MIqCd~C~~WfH~~Cvgi~~~~~~~~~~C~~C~~ 66 (68)
T 3o70_A 16 FQGLVTC-FCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRD 66 (68)
T ss_dssp TTTCCCS-TTCCCCTTCCEEECTTTCCEEETTTTTCCTTSCCSSCCCHHHHT
T ss_pred CCCceEe-ECCCcCCCCCEEECCCCCccccccccCcCcccCCCcEECCCCCC
Confidence 3445677 88854 46999999999999999997642 246999999974
No 76
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=96.84 E-value=0.00011 Score=62.39 Aligned_cols=47 Identities=34% Similarity=0.836 Sum_probs=37.3
Q ss_pred ccccccccccccC----CceEEcC-CCCCccccCCCCCCC--------CCCCCccccccc
Q 002944 713 KENDDLCGICMDG----GDLLCCD-SCPRAFHIDCVSLPG--------IPSGTWHCRYCM 759 (863)
Q Consensus 713 ~endd~C~VC~dg----GdLL~CD-~CpraFH~~CL~L~~--------vP~G~W~C~~C~ 759 (863)
.+....|.+|+.+ ..++.|| .|.+-||..|+++.. .|.+.|+|+.|.
T Consensus 5 ~~~~~~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cvglt~~~~~~l~~e~~~~w~C~~C~ 64 (65)
T 2vpb_A 5 SDPVYPCGICTNEVNDDQDAILCEASCQKWFHRICTGMTETAYGLLTAEASAVWGCDTCM 64 (65)
T ss_dssp ----CBCTTTCSBCCTTSCEEEBTTTTCCEEEHHHHTCCHHHHHHHHHCTTEEECCHHHH
T ss_pred CCCcCcCccCCCccCCCCCeEecccCccccCchhccCCCHHHHHHhhccCCCcEECcCcc
Confidence 3455789999975 2599999 999999999999874 377899999996
No 77
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=96.82 E-value=0.00018 Score=61.98 Aligned_cols=47 Identities=32% Similarity=0.762 Sum_probs=38.0
Q ss_pred ccccccccccccC---CceEEcCCCCCccccCCCCCCCCC-------CCCcccccccc
Q 002944 713 KENDDLCGICMDG---GDLLCCDSCPRAFHIDCVSLPGIP-------SGTWHCRYCMN 760 (863)
Q Consensus 713 ~endd~C~VC~dg---GdLL~CD~CpraFH~~CL~L~~vP-------~G~W~C~~C~~ 760 (863)
+.+..+| +|+.. +.+|.||.|..-||..|+++...+ ...|+|+.|..
T Consensus 13 d~~~~~C-~C~~~~~~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~ 69 (76)
T 1wem_A 13 DPNALYC-ICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTI 69 (76)
T ss_dssp CTTCCCS-TTCCCCCSSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHH
T ss_pred CCCCCEE-ECCCccCCCCEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCcC
Confidence 3445678 78864 579999999999999999987543 57999999985
No 78
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=96.77 E-value=0.00032 Score=61.02 Aligned_cols=45 Identities=27% Similarity=0.711 Sum_probs=37.4
Q ss_pred ccccccccccC---CceEEcC--CCCCccccCCCCCCCCCC-------CCcccccccc
Q 002944 715 NDDLCGICMDG---GDLLCCD--SCPRAFHIDCVSLPGIPS-------GTWHCRYCMN 760 (863)
Q Consensus 715 ndd~C~VC~dg---GdLL~CD--~CpraFH~~CL~L~~vP~-------G~W~C~~C~~ 760 (863)
...+| +|+.. |.+|.|| .|..-||..|++++..+. ..|+|+.|+.
T Consensus 15 ~~~~C-iC~~~~~~g~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~~ 71 (78)
T 1wew_A 15 IKVRC-VCGNSLETDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRL 71 (78)
T ss_dssp CCCCC-SSCCCCCCSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHH
T ss_pred CCEEe-ECCCcCCCCCEEEECCccCCccccCEEEccccccccccccCCCCEECCCCCc
Confidence 44677 68864 7899999 999999999999876553 6899999985
No 79
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=96.61 E-value=0.00087 Score=57.36 Aligned_cols=45 Identities=24% Similarity=0.623 Sum_probs=36.0
Q ss_pred ccccccccccC---C-ceEEcCCCCCccccCCCCCCCC--CCCCcccccccc
Q 002944 715 NDDLCGICMDG---G-DLLCCDSCPRAFHIDCVSLPGI--PSGTWHCRYCMN 760 (863)
Q Consensus 715 ndd~C~VC~dg---G-dLL~CD~CpraFH~~CL~L~~v--P~G~W~C~~C~~ 760 (863)
...+| +|+.. | .+|.||.|..-||..|+++... ....|+|+.|..
T Consensus 15 ~~~~C-~C~~~~~~g~~mI~Cd~C~~W~H~~Cvg~~~~~~~~~~~~C~~C~~ 65 (72)
T 1wee_A 15 WKVDC-KCGTKDDDGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIE 65 (72)
T ss_dssp SEECC-TTCCCSCCSSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCHHHHH
T ss_pred cceEe-eCCCccCCCCcEEECCCCCCccCCeeeccCccccCCCcEECCCccC
Confidence 34678 68853 4 5999999999999999997642 347999999975
No 80
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=96.53 E-value=0.0004 Score=60.44 Aligned_cols=46 Identities=24% Similarity=0.582 Sum_probs=36.6
Q ss_pred cccccccccc----CCceEEcCCCCCccccCCCCCCCCC---CCCccccccccc
Q 002944 715 NDDLCGICMD----GGDLLCCDSCPRAFHIDCVSLPGIP---SGTWHCRYCMNT 761 (863)
Q Consensus 715 ndd~C~VC~d----gGdLL~CD~CpraFH~~CL~L~~vP---~G~W~C~~C~~~ 761 (863)
...+| +|+. .+.+|.||.|..-||..|+++...+ ...|+|+.|...
T Consensus 11 ~~~~C-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~ 63 (79)
T 1wep_A 11 VPVYC-LCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAV 63 (79)
T ss_dssp CCCCS-TTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTT
T ss_pred CccEE-EcCCccCCCCceEEcCCCCCcEEeeecCcccccccCCCeEECCCcccc
Confidence 34566 7875 4579999999999999999987543 378999999863
No 81
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=96.39 E-value=0.0011 Score=57.20 Aligned_cols=50 Identities=22% Similarity=0.313 Sum_probs=34.3
Q ss_pred cCccccCCCCCcCCCCCCCCceEecccccccccccccccCCCCCCC-C--CCCCcceeeee
Q 002944 804 LGGCVLCRGRDFCKSRFGRRTVILCDQCEREYHVGCLKDHGMEDLQ-V--PQLLVYDTISF 861 (863)
Q Consensus 804 ~~~C~ICkk~dfsks~f~~gtII~CDqCeraYHV~CLr~aGL~dLK-l--Pe~~wy~~iC~ 861 (863)
...| +|++++. .+.+|+||.|..|||..|+.-... ..+ + +...|+|+.|.
T Consensus 16 ~~~C-~C~~~~~------~~~MI~Cd~C~~WfH~~Cvgl~~~-~~~~l~~~~~~~~C~~C~ 68 (76)
T 1wem_A 16 ALYC-ICRQPHN------NRFMICCDRCEEWFHGDCVGISEA-RGRLLERNGEDYICPNCT 68 (76)
T ss_dssp CCCS-TTCCCCC------SSCEEECSSSCCEEEHHHHSCCHH-HHHHHHHHTCCCCCHHHH
T ss_pred CCEE-ECCCccC------CCCEEEeCCCCCcEeCeEEccchh-hhhhccCCCCeEECcCCc
Confidence 4568 7998652 368999999999999999971100 000 1 34678888774
No 82
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=96.38 E-value=0.00076 Score=60.44 Aligned_cols=49 Identities=20% Similarity=0.385 Sum_probs=39.6
Q ss_pred CccccCCCCCcCCCCCCCCceEecccccccccccccccCCCCC--------CC-CCCCCcceeee
Q 002944 805 GGCVLCRGRDFCKSRFGRRTVILCDQCEREYHVGCLKDHGMED--------LQ-VPQLLVYDTIS 860 (863)
Q Consensus 805 ~~C~ICkk~dfsks~f~~gtII~CDqCeraYHV~CLr~aGL~d--------LK-lPe~~wy~~iC 860 (863)
..|.+|..+. ...++.|..|.|.||.+||++.|+.. ++ -++.-|+||.|
T Consensus 16 ~~C~VC~~~t-------~~~l~pCRvC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~C 73 (89)
T 1wil_A 16 EMCDVCEVWT-------AESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYC 73 (89)
T ss_dssp CCCTTTCCCC-------SSCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTT
T ss_pred cccCcccccc-------ccceeccccccccccHhhcccccccccHHHHHHHHccCCCCCcccccc
Confidence 3599999864 46799999999999999999865321 33 68899999988
No 83
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=96.37 E-value=0.00087 Score=65.04 Aligned_cols=49 Identities=20% Similarity=0.360 Sum_probs=37.7
Q ss_pred cCccccCCCCCcCCCCCCCCceEecccccccccccccccCCC-CCCC---CCCCCcceeeee
Q 002944 804 LGGCVLCRGRDFCKSRFGRRTVILCDQCEREYHVGCLKDHGM-EDLQ---VPQLLVYDTISF 861 (863)
Q Consensus 804 ~~~C~ICkk~dfsks~f~~gtII~CDqCeraYHV~CLr~aGL-~dLK---lPe~~wy~~iC~ 861 (863)
...|.+|+. .+.++.||.|++.||..|+.+.-- ..|. .|++-|+|+.|-
T Consensus 63 ~d~C~vC~~---------GG~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~ 115 (142)
T 2lbm_A 63 DEQCRWCAE---------GGNLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICH 115 (142)
T ss_dssp BCSCSSSCC---------CSSEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTC
T ss_pred CCeecccCC---------CCcEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeeccc
Confidence 346999987 478999999999999999983211 1122 399999999984
No 84
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=96.27 E-value=0.0014 Score=56.91 Aligned_cols=51 Identities=22% Similarity=0.267 Sum_probs=35.4
Q ss_pred CCcCccccCCCCCcCCCCCCCCceEecccccccccccccccCCCCCCC-CCCCCcceeeee
Q 002944 802 TELGGCVLCRGRDFCKSRFGRRTVILCDQCEREYHVGCLKDHGMEDLQ-VPQLLVYDTISF 861 (863)
Q Consensus 802 ~e~~~C~ICkk~dfsks~f~~gtII~CDqCeraYHV~CLr~aGL~dLK-lPe~~wy~~iC~ 861 (863)
.+...| +|++++. ..+.+|+||.|..|||..|+. +..-. ..-+.|+|+.|-
T Consensus 10 ~~~~~C-~C~~~~d-----~~~~MIqCd~C~~WfH~~Cvg---l~~~~~~~~~~~~C~~C~ 61 (79)
T 1wep_A 10 LVPVYC-LCRQPYN-----VNHFMIECGLCQDWFHGSCVG---IEEENAVDIDIYHCPDCE 61 (79)
T ss_dssp CCCCCS-TTSCSCC-----SSSCEEEBTTTCCEEEHHHHT---CCHHHHTTCSBBCCTTTT
T ss_pred CCccEE-EcCCccC-----CCCceEEcCCCCCcEEeeecC---cccccccCCCeEECCCcc
Confidence 344568 8998641 247899999999999999997 22111 223578888774
No 85
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=96.26 E-value=0.0019 Score=56.24 Aligned_cols=51 Identities=24% Similarity=0.386 Sum_probs=35.1
Q ss_pred CcCccccCCCCCcCCCCCCCCceEecc--cccccccccccccCCCCC--CC-CCCCCcceeeee
Q 002944 803 ELGGCVLCRGRDFCKSRFGRRTVILCD--QCEREYHVGCLKDHGMED--LQ-VPQLLVYDTISF 861 (863)
Q Consensus 803 e~~~C~ICkk~dfsks~f~~gtII~CD--qCeraYHV~CLr~aGL~d--LK-lPe~~wy~~iC~ 861 (863)
+...| +|++.+ ..+.||+|| .|..|||..|+.-..... +. +| ..|||+.|.
T Consensus 15 ~~~~C-iC~~~~------~~g~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~-~~~~C~~C~ 70 (78)
T 1wew_A 15 IKVRC-VCGNSL------ETDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLP-ESFYCEICR 70 (78)
T ss_dssp CCCCC-SSCCCC------CCSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSC-SSCCCHHHH
T ss_pred CCEEe-ECCCcC------CCCCEEEECCccCCccccCEEEccccccccccccCC-CCEECCCCC
Confidence 44569 799863 246899999 999999999997222110 11 22 578888874
No 86
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=96.24 E-value=0.003 Score=53.58 Aligned_cols=47 Identities=21% Similarity=0.519 Sum_probs=32.2
Q ss_pred ccccCCCCCcCCCCCCCCceEecc--cccccccccccccCCCCCCC--CCCCCcceeee
Q 002944 806 GCVLCRGRDFCKSRFGRRTVILCD--QCEREYHVGCLKDHGMEDLQ--VPQLLVYDTIS 860 (863)
Q Consensus 806 ~C~ICkk~dfsks~f~~gtII~CD--qCeraYHV~CLr~aGL~dLK--lPe~~wy~~iC 860 (863)
.| +|+..+ ..+.||+|| +|..|||..|+.-..-.... +| +.|||+.|
T Consensus 12 ~C-~C~~~~------~~g~mI~CD~~~C~~W~H~~Cvgi~~~~~~~~~~p-~~~~C~~C 62 (68)
T 2rsd_A 12 RC-ICSSTM------VNDSMIQCEDQRCQVWQHLNCVLIPDKPGESAEVP-PVFYCELC 62 (68)
T ss_dssp CC-TTCCCS------CCSCEEECSCTTTCEEEETTTSCCCSSTTSCCCCC-SSCCCHHH
T ss_pred Ee-ECCCCc------CCCCEEEECCCCCCCeEchhhCCCCcccccccCCC-CcEECcCc
Confidence 48 698753 346899999 69999999998622211111 44 36888887
No 87
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=96.23 E-value=0.0011 Score=53.51 Aligned_cols=41 Identities=27% Similarity=0.562 Sum_probs=32.1
Q ss_pred ccccccC----CceEEcC-CCCCccccCCCCCCCCC--CCCccccccc
Q 002944 719 CGICMDG----GDLLCCD-SCPRAFHIDCVSLPGIP--SGTWHCRYCM 759 (863)
Q Consensus 719 C~VC~dg----GdLL~CD-~CpraFH~~CL~L~~vP--~G~W~C~~C~ 759 (863)
|.+|+.+ +.+|.|| .|..-||..|+++...+ ...|+|+.|+
T Consensus 5 cc~C~~p~~~~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~~~~~~C~~C~ 52 (52)
T 2kgg_A 5 AQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCA 52 (52)
T ss_dssp CTTCCCCCCTTCCEEECTTTTCCEEETTTTTCCHHHHHHSCCCCSCC-
T ss_pred CCCCcCccCCCCcEEEeCCCCCccCcccccCCCccccCCCCEECCCCC
Confidence 4566643 4599999 89999999999987543 4899999985
No 88
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=96.10 E-value=0.00064 Score=65.06 Aligned_cols=49 Identities=22% Similarity=0.470 Sum_probs=38.5
Q ss_pred CcCccccCCCCCcCCCCCCCCceEecccccccccccccccC-CCCCCC-C--CCCCcceeee
Q 002944 803 ELGGCVLCRGRDFCKSRFGRRTVILCDQCEREYHVGCLKDH-GMEDLQ-V--PQLLVYDTIS 860 (863)
Q Consensus 803 e~~~C~ICkk~dfsks~f~~gtII~CDqCeraYHV~CLr~a-GL~dLK-l--Pe~~wy~~iC 860 (863)
....|.+|.. ++.++.||.|++.||..|+.+. |-..|. + |.+-|+|+.|
T Consensus 56 ~~~~C~vC~d---------GG~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C 108 (129)
T 3ql9_A 56 MDEQCRWCAE---------GGNLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYIC 108 (129)
T ss_dssp CBSSCTTTCC---------CSEEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTT
T ss_pred CCCcCeecCC---------CCeeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCc
Confidence 3456999987 4789999999999999999853 211243 3 8999999988
No 89
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=96.08 E-value=0.0026 Score=51.31 Aligned_cols=43 Identities=26% Similarity=0.511 Sum_probs=31.3
Q ss_pred cccCCCCCcCCCCCCCCceEecccccccccccccccCCCCCCCCCCCCcceeee
Q 002944 807 CVLCRGRDFCKSRFGRRTVILCDQCEREYHVGCLKDHGMEDLQVPQLLVYDTIS 860 (863)
Q Consensus 807 C~ICkk~dfsks~f~~gtII~CDqCeraYHV~CLr~aGL~dLKlPe~~wy~~iC 860 (863)
| +|++++ .++.+|+||.|..+||..|+.-.. -.+| +.|+|+.|
T Consensus 7 C-~C~~~~------~~~~MI~Cd~C~~W~H~~Cvgi~~---~~~~-~~~~C~~C 49 (52)
T 3o7a_A 7 C-FCMKPF------AGRPMIECNECHTWIHLSCAKIRK---SNVP-EVFVCQKC 49 (52)
T ss_dssp S-TTCCBC------TTCCEEECTTTCCEEETTTTTCCG---GGCC-SSCCCHHH
T ss_pred E-EeCCcC------CCCCEEEcCCCCccccccccCCCc---ccCC-CcEECcCC
Confidence 6 688754 246899999999999999998221 1255 57777766
No 90
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=96.06 E-value=0.00098 Score=65.00 Aligned_cols=49 Identities=18% Similarity=0.263 Sum_probs=35.6
Q ss_pred cCccccCCCCCcCCCCCCCCceEecccccccccccccccCCCCCCC-CCCCCcceeeee
Q 002944 804 LGGCVLCRGRDFCKSRFGRRTVILCDQCEREYHVGCLKDHGMEDLQ-VPQLLVYDTISF 861 (863)
Q Consensus 804 ~~~C~ICkk~dfsks~f~~gtII~CDqCeraYHV~CLr~aGL~dLK-lPe~~wy~~iC~ 861 (863)
...| +|++++. ..+.+|+||.|++|||..|+. +.... .+.+.|+|+.|-
T Consensus 8 ~~~C-~C~~~~~-----~~~~mi~Cd~C~~WfH~~Cv~---~~~~~~~~~~~~~C~~C~ 57 (174)
T 2ri7_A 8 KLYC-ICKTPED-----ESKFYIGCDRCQNWYHGRCVG---ILQSEAELIDEYVCPQCQ 57 (174)
T ss_dssp CEET-TTTEECC-----TTSCEEECTTTCCEEEHHHHT---CCHHHHTTCSSCCCHHHH
T ss_pred CcEe-eCCCCCC-----CCCCEeECCCCCchhChhhcC---CchhhccCccCeecCCCc
Confidence 4459 9998631 246799999999999999996 32222 346789998883
No 91
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=96.04 E-value=0.00043 Score=58.82 Aligned_cols=52 Identities=17% Similarity=0.296 Sum_probs=37.4
Q ss_pred CccccCCCCCcCCCCCCCCceEecc-cccccccccccccCC--CCCCC-CCCCCcceeeee
Q 002944 805 GGCVLCRGRDFCKSRFGRRTVILCD-QCEREYHVGCLKDHG--MEDLQ-VPQLLVYDTISF 861 (863)
Q Consensus 805 ~~C~ICkk~dfsks~f~~gtII~CD-qCeraYHV~CLr~aG--L~dLK-lPe~~wy~~iC~ 861 (863)
-.|.+|+++.. ....+|+|| .|.++||..|+.-.- ...|. -|...|+|+.|-
T Consensus 9 ~~C~~C~~p~~-----~~~~mI~CD~~C~~WfH~~Cvglt~~~~~~l~~e~~~~w~C~~C~ 64 (65)
T 2vpb_A 9 YPCGICTNEVN-----DDQDAILCEASCQKWFHRICTGMTETAYGLLTAEASAVWGCDTCM 64 (65)
T ss_dssp CBCTTTCSBCC-----TTSCEEEBTTTTCCEEEHHHHTCCHHHHHHHHHCTTEEECCHHHH
T ss_pred CcCccCCCccC-----CCCCeEecccCccccCchhccCCCHHHHHHhhccCCCcEECcCcc
Confidence 34999999742 356899999 999999999986211 11122 378889888773
No 92
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=95.99 E-value=0.0019 Score=59.41 Aligned_cols=48 Identities=23% Similarity=0.530 Sum_probs=36.1
Q ss_pred ccccCCCCCcCCCCCCCCceEecc-cccccccccccccCCCCC-----CC-CCCCCcceeeee
Q 002944 806 GCVLCRGRDFCKSRFGRRTVILCD-QCEREYHVGCLKDHGMED-----LQ-VPQLLVYDTISF 861 (863)
Q Consensus 806 ~C~ICkk~dfsks~f~~gtII~CD-qCeraYHV~CLr~aGL~d-----LK-lPe~~wy~~iC~ 861 (863)
.|.+|+++.. +.+.+|+|| .|..|||..|+. |.. |. -|+..|+|+.|-
T Consensus 5 ~C~iC~~p~~-----~~~~mi~Cdd~C~~WfH~~CVg---lt~~~~~~i~~~~~~~~~Cp~C~ 59 (105)
T 2xb1_A 5 PCGACRSEVN-----DDQDAILCEASCQKWFHRECTG---MTESAYGLLTTEASAVWACDLCL 59 (105)
T ss_dssp BCTTTCSBCC-----TTSCEEECTTTTCCEEEGGGTT---CCHHHHHHHHHCTTEEECCHHHH
T ss_pred CCCCCCCccC-----CCCCEEEecCCcccccccccCC---cCHHHHHhhccCCCCCEECcccc
Confidence 4999999742 246799998 999999999987 322 11 277889998884
No 93
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=95.80 E-value=0.0023 Score=55.15 Aligned_cols=49 Identities=24% Similarity=0.374 Sum_probs=33.6
Q ss_pred cCccccCCCCCcCCCCCCCCceEecccccccccccccccCCCCCCCCCC-CCcceeeee
Q 002944 804 LGGCVLCRGRDFCKSRFGRRTVILCDQCEREYHVGCLKDHGMEDLQVPQ-LLVYDTISF 861 (863)
Q Consensus 804 ~~~C~ICkk~dfsks~f~~gtII~CDqCeraYHV~CLr~aGL~dLKlPe-~~wy~~iC~ 861 (863)
...| +|++++ ...+.+|+||.|..|||..|+. +..-.+|. +.|+|+.|-
T Consensus 10 ~~yC-iC~~~~-----~~~~~MI~Cd~C~~WfH~~Cvg---~~~~~~~~~~~~~C~~C~ 59 (75)
T 3kqi_A 10 PVYC-VCRLPY-----DVTRFMIECDACKDWFHGSCVG---VEEEEAPDIDIYHCPNCE 59 (75)
T ss_dssp CEET-TTTEEC-----CTTSCEEECTTTCCEEEHHHHT---CCTTTGGGBSSCCCHHHH
T ss_pred eeEE-ECCCcC-----CCCCCEEEcCCCCCCEeccccc---ccccccCCCCEEECCCCc
Confidence 3447 898753 1357899999999999999997 21111232 578887773
No 94
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=95.79 E-value=0.0029 Score=56.53 Aligned_cols=39 Identities=26% Similarity=0.604 Sum_probs=32.7
Q ss_pred CCCcCccccCCCCCcCCCCCCCCceEeccc--ccccccccccccCCCC
Q 002944 801 DTELGGCVLCRGRDFCKSRFGRRTVILCDQ--CEREYHVGCLKDHGME 846 (863)
Q Consensus 801 ~~e~~~C~ICkk~dfsks~f~~gtII~CDq--CeraYHV~CLr~aGL~ 846 (863)
.+|...|++|++.. .+..|+|+. |.++||+.|++.+|+.
T Consensus 14 ~R~~l~C~iC~~~~-------~GAciqC~~~~C~~~fHv~CA~~aGl~ 54 (87)
T 2lq6_A 14 ARWKLTCYLCKQKG-------VGASIQCHKANCYTAFHVTCAQKAGLY 54 (87)
T ss_dssp CCCCCCBTTTTBCC-------SSCEEECSCTTTCCEEEHHHHHHHTCC
T ss_pred HHhcCCCcCCCCCC-------CcEeEecCCCCCCCcCcHHHHHHCCCc
Confidence 56777899998631 378999995 9999999999999974
No 95
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=95.75 E-value=0.0024 Score=51.54 Aligned_cols=46 Identities=13% Similarity=0.196 Sum_probs=32.3
Q ss_pred cccCCCCCcCCCCCCCCceEecc-cccccccccccccCCCCCCCCCCCCcceeee
Q 002944 807 CVLCRGRDFCKSRFGRRTVILCD-QCEREYHVGCLKDHGMEDLQVPQLLVYDTIS 860 (863)
Q Consensus 807 C~ICkk~dfsks~f~~gtII~CD-qCeraYHV~CLr~aGL~dLKlPe~~wy~~iC 860 (863)
|-+|++++. +...+|+|| .|+.+||..|+. +..-.+....|+++.|
T Consensus 5 cc~C~~p~~-----~~~~mI~Cd~~C~~WfH~~Cvg---l~~~~~~~~~~~C~~C 51 (52)
T 2kgg_A 5 AQNCQRPCK-----DKVDWVQCDGGCDEWFHQVCVG---VSPEMAENEDYICINC 51 (52)
T ss_dssp CTTCCCCCC-----TTCCEEECTTTTCCEEETTTTT---CCHHHHHHSCCCCSCC
T ss_pred CCCCcCccC-----CCCcEEEeCCCCCccCcccccC---CCccccCCCCEECCCC
Confidence 778988752 246799999 899999999987 2111122367777765
No 96
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=95.52 E-value=0.0051 Score=49.60 Aligned_cols=37 Identities=19% Similarity=0.648 Sum_probs=30.5
Q ss_pred cCCceEEcCCCCCccccCCCCCCCCC-CCCcccccccc
Q 002944 724 DGGDLLCCDSCPRAFHIDCVSLPGIP-SGTWHCRYCMN 760 (863)
Q Consensus 724 dgGdLL~CD~CpraFH~~CL~L~~vP-~G~W~C~~C~~ 760 (863)
+++.+|.||.|..-||..|+++...+ ...|+|+.|+.
T Consensus 14 ~~~~MI~Cd~C~~W~H~~Cvgi~~~~~~~~~~C~~C~~ 51 (52)
T 3o7a_A 14 AGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRD 51 (52)
T ss_dssp TTCCEEECTTTCCEEETTTTTCCGGGCCSSCCCHHHHT
T ss_pred CCCCEEEcCCCCccccccccCCCcccCCCcEECcCCCC
Confidence 34589999999999999999976532 47999999963
No 97
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=95.28 E-value=0.0038 Score=53.81 Aligned_cols=40 Identities=28% Similarity=0.675 Sum_probs=33.2
Q ss_pred cccc----CCceEEcCCCCCccccCCCCCCCCCC---CCcccccccc
Q 002944 721 ICMD----GGDLLCCDSCPRAFHIDCVSLPGIPS---GTWHCRYCMN 760 (863)
Q Consensus 721 VC~d----gGdLL~CD~CpraFH~~CL~L~~vP~---G~W~C~~C~~ 760 (863)
+|+. ++.+|.||.|..-||..|+++...+. ..|+|+.|..
T Consensus 14 iC~~~~~~~~~MI~Cd~C~~WfH~~Cvg~~~~~~~~~~~~~C~~C~~ 60 (75)
T 3kqi_A 14 VCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEK 60 (75)
T ss_dssp TTTEECCTTSCEEECTTTCCEEEHHHHTCCTTTGGGBSSCCCHHHHH
T ss_pred ECCCcCCCCCCEEEcCCCCCCEecccccccccccCCCCEEECCCCcc
Confidence 6664 35799999999999999999876542 6899999985
No 98
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=95.15 E-value=0.0052 Score=60.68 Aligned_cols=52 Identities=29% Similarity=0.778 Sum_probs=42.6
Q ss_pred CCccccccccccccCCceEEcC--CCCCccccCCCC----CC----CCCCCCcccccccccc
Q 002944 711 SSKENDDLCGICMDGGDLLCCD--SCPRAFHIDCVS----LP----GIPSGTWHCRYCMNTF 762 (863)
Q Consensus 711 s~~endd~C~VC~dgGdLL~CD--~CpraFH~~CL~----L~----~vP~G~W~C~~C~~~~ 762 (863)
+.+..+.+|.+|++||+|++|| .|+++|-..|+. .. ......|.|-.|...+
T Consensus 74 DeDG~~~yC~wC~~Gg~l~~Cdn~~C~r~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C~P~~ 135 (159)
T 3a1b_A 74 DDDGYQSYCTICCGGREVLMCGNNNCCRCFCVECVDLLVGPGAAQAAIKEDPWNCYMCGHKG 135 (159)
T ss_dssp CTTSSBSSCTTTSCCSEEEECSSTTTCCEEEHHHHHHHTCTTHHHHHHTSSSCCCTTTCSSC
T ss_pred CCCCCcceeeEecCCCeEEeeCCCCCCCchhHHHHHHhcCHhHHHHHhccCCCEEEecCCcc
Confidence 4556678999999999999999 899999999993 21 1456899999998643
No 99
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=94.62 E-value=0.0067 Score=60.92 Aligned_cols=46 Identities=24% Similarity=0.742 Sum_probs=36.0
Q ss_pred ccccccccC---C----ceEEcCCCCCccccCCCCCCC--------CCC-CCcccccccccc
Q 002944 717 DLCGICMDG---G----DLLCCDSCPRAFHIDCVSLPG--------IPS-GTWHCRYCMNTF 762 (863)
Q Consensus 717 d~C~VC~dg---G----dLL~CD~CpraFH~~CL~L~~--------vP~-G~W~C~~C~~~~ 762 (863)
.+|.+|+.. + .+|.||.|.+-||..|+++.. .|+ ..|+|+.|+...
T Consensus 3 ~~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~~ 64 (183)
T 3lqh_A 3 NFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERH 64 (183)
T ss_dssp CBCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCSS
T ss_pred CcCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCCCC
Confidence 568888843 3 499999999999999999763 232 489999998743
No 100
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=94.24 E-value=0.0063 Score=69.09 Aligned_cols=45 Identities=27% Similarity=0.657 Sum_probs=36.5
Q ss_pred ccccccccc----CCceEEcCCCCCccccCCCCCCCCCC---CCccccccccc
Q 002944 716 DDLCGICMD----GGDLLCCDSCPRAFHIDCVSLPGIPS---GTWHCRYCMNT 761 (863)
Q Consensus 716 dd~C~VC~d----gGdLL~CD~CpraFH~~CL~L~~vP~---G~W~C~~C~~~ 761 (863)
.-+| +|+. ++.+|.||.|..-||..|+++...+. +.|+|+.|...
T Consensus 37 ~~yC-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~ 88 (488)
T 3kv5_D 37 PVYC-VCRQPYDVNRFMIECDICKDWFHGSCVGVEEHHAVDIDLYHCPNCAVL 88 (488)
T ss_dssp CEET-TTTEECCTTSCEEEBTTTCCEEEHHHHTCCGGGGGGEEEBCCHHHHHH
T ss_pred CeEE-eCCCcCCCCCCeEEccCCCCceeeeecCcCcccccCCCEEECCCCcCC
Confidence 3456 7875 46799999999999999999876653 67999999853
No 101
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=93.35 E-value=0.017 Score=63.88 Aligned_cols=52 Identities=27% Similarity=0.761 Sum_probs=42.1
Q ss_pred CCccccccccccccCCceEEcC--CCCCccccCCCC----CC---C-CCCCCcccccccccc
Q 002944 711 SSKENDDLCGICMDGGDLLCCD--SCPRAFHIDCVS----LP---G-IPSGTWHCRYCMNTF 762 (863)
Q Consensus 711 s~~endd~C~VC~dgGdLL~CD--~CpraFH~~CL~----L~---~-vP~G~W~C~~C~~~~ 762 (863)
+.+..+.+|.+|++||+|++|| .|+++|...|+. .. . .....|.|-.|....
T Consensus 88 D~DG~~~yCr~C~~Gg~l~~Cdn~~C~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p~p 149 (386)
T 2pv0_B 88 DDDGYQSYCSICCSGETLLICGNPDCTRCYCFECVDSLVGPGTSGKVHAMSNWVCYLCLPSS 149 (386)
T ss_dssp CSSSSBCSCTTTCCCSSCEECCSTTCCCEECHHHHHHHTCTTHHHHHHHCSSCCCTTTSSCC
T ss_pred CCCCCcccceEcCCCCeEEEeCCCCCCcchHHHHHHHhcChhHHHHhhccCCceEEEcCCcc
Confidence 3456678999999999999999 999999999994 11 1 235789999998654
No 102
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=92.98 E-value=0.033 Score=63.88 Aligned_cols=35 Identities=26% Similarity=0.622 Sum_probs=29.9
Q ss_pred CceEEcCCCCCccccCCCCCCCCC---CCCcccccccc
Q 002944 726 GDLLCCDSCPRAFHIDCVSLPGIP---SGTWHCRYCMN 760 (863)
Q Consensus 726 GdLL~CD~CpraFH~~CL~L~~vP---~G~W~C~~C~~ 760 (863)
..++.||.|..-||..|+++...+ .+.|+|+.|..
T Consensus 56 ~~mI~CD~C~~WfH~~CVgi~~~~a~~~~~y~Cp~C~~ 93 (528)
T 3pur_A 56 FQWIGCDSCQTWYHFLCSGLEQFEYYLYEKFFCPKCVP 93 (528)
T ss_dssp TSEEECTTTCCEEEGGGTTCCGGGTTTEEECCCTTTHH
T ss_pred CCEEECCCCCcCCCCcCCCCChhHhcCCCeEECcCCcC
Confidence 368999999999999999987543 37899999985
No 103
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=91.70 E-value=0.032 Score=63.35 Aligned_cols=50 Identities=24% Similarity=0.337 Sum_probs=34.1
Q ss_pred CcCccccCCCCCcCCCCCCCCceEecccccccccccccccCCCCCCCCCC-CCcceeeee
Q 002944 803 ELGGCVLCRGRDFCKSRFGRRTVILCDQCEREYHVGCLKDHGMEDLQVPQ-LLVYDTISF 861 (863)
Q Consensus 803 e~~~C~ICkk~dfsks~f~~gtII~CDqCeraYHV~CLr~aGL~dLKlPe-~~wy~~iC~ 861 (863)
....| +|++++. ..+.+|+||.|+.|||..|+. +..-..+. +.|+|+.|-
T Consensus 36 ~~~yC-~C~~~~d-----~~~~MIqCd~C~~WfH~~Cvg---l~~~~~~~~~~~~C~~C~ 86 (488)
T 3kv5_D 36 PPVYC-VCRQPYD-----VNRFMIECDICKDWFHGSCVG---VEEHHAVDIDLYHCPNCA 86 (488)
T ss_dssp CCEET-TTTEECC-----TTSCEEEBTTTCCEEEHHHHT---CCGGGGGGEEEBCCHHHH
T ss_pred CCeEE-eCCCcCC-----CCCCeEEccCCCCceeeeecC---cCcccccCCCEEECCCCc
Confidence 34558 8988631 247899999999999999996 22111221 568888773
No 104
>1ufn_A Putative nuclear protein homolog 5830484A20RIK; SAND domain, KDWK motif, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.217.1.1
Probab=90.88 E-value=0.025 Score=51.62 Aligned_cols=49 Identities=22% Similarity=0.248 Sum_probs=39.5
Q ss_pred eeeCCeeEeCCC--CCccChhhhhhccCcccCCCCCceeEecCCccchhhhh
Q 002944 653 YKKGFGILCTCC--NSEVSPSQFEAHAGWASRRKPFQHIYTSNGVSLHELSI 702 (863)
Q Consensus 653 ~k~G~GI~CsCC--n~~~SPSeFEaHAG~~srRkPy~sIytsnG~SL~elai 702 (863)
+.+|....|... ++||||++||..+|....++|..+|++ +|++|..+..
T Consensus 33 ~~~G~~~kCI~~~dg~w~TP~EFe~~~g~~~sKdWKrSIr~-~G~~Lr~Lme 83 (94)
T 1ufn_A 33 LKQGASKKCIQNEAGDWLTVKEFLNEGGRATSKDWKGVIRC-NGETLRHLEQ 83 (94)
T ss_dssp HHSCTTSCCEECTTCCEECHHHHHHHHTCTTCSCHHHHCEE-TTEEHHHHHH
T ss_pred hcCCCCcccEEeCCCcEEChHHhhhhcCcccccCcceeeEE-CCEeHHHHHH
Confidence 344445566666 379999999999999999999999998 8999987653
No 105
>1h5p_A Nuclear autoantigen SP100-B; transcription, DNA binding, SAND domain, KDWK, nuclear protein, alternative splicing; NMR {Homo sapiens} SCOP: d.217.1.1
Probab=89.81 E-value=0.011 Score=53.99 Aligned_cols=46 Identities=20% Similarity=0.235 Sum_probs=37.0
Q ss_pred CCeeEeCCC--CCccChhhhhhccCcccCCCCCceeEecCCccchhhhh
Q 002944 656 GFGILCTCC--NSEVSPSQFEAHAGWASRRKPFQHIYTSNGVSLHELSI 702 (863)
Q Consensus 656 G~GI~CsCC--n~~~SPSeFEaHAG~~srRkPy~sIytsnG~SL~elai 702 (863)
|....|... +.||||.+||..+|....++|..+|++ +|++|..+..
T Consensus 31 G~~~KCI~~~~g~w~TP~EFe~~~g~~~sKdWKrSIR~-~G~~L~~Lme 78 (95)
T 1h5p_A 31 GTSKKCIQSEDKKWFTPREFEIEGDRGASKNWKLSIRC-GGYTLKVLME 78 (95)
T ss_dssp GGGSCCEEETTTEEECHHHHHHHHTCSTTCCHHHHCEE-TTEEHHHHHH
T ss_pred CCCccCeEeCCCeEEChHHhhhhcCcccCcCcceeeEE-CCEEHHHHHH
Confidence 333455544 369999999999999999999999998 8999987764
No 106
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=88.20 E-value=0.041 Score=61.95 Aligned_cols=40 Identities=28% Similarity=0.600 Sum_probs=33.1
Q ss_pred cccc----CCceEEcCCCCCccccCCCCCCCCC---CCCcccccccc
Q 002944 721 ICMD----GGDLLCCDSCPRAFHIDCVSLPGIP---SGTWHCRYCMN 760 (863)
Q Consensus 721 VC~d----gGdLL~CD~CpraFH~~CL~L~~vP---~G~W~C~~C~~ 760 (863)
+|+. ++.++.||.|..-||..|+++...+ .+.|+|+.|..
T Consensus 9 iC~~~~d~~~~MIqCD~C~~WfH~~CVgi~~~~~~~~~~y~C~~C~~ 55 (447)
T 3kv4_A 9 LCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCEV 55 (447)
T ss_dssp TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTEEECCCHHHHH
T ss_pred eCCCcCCCCCCeEEcCCCCcccccccCCcCcccccCCCEEECCCCcc
Confidence 5664 4689999999999999999987543 26899999975
No 107
>1oqj_A Glucocorticoid modulatory element binding protein-1; SAND domain, alpha-beta fold, KDWK motif, zinc-binding motif, DNA binding protein; 1.55A {Homo sapiens} SCOP: d.217.1.1
Probab=87.64 E-value=0.056 Score=49.56 Aligned_cols=37 Identities=22% Similarity=0.278 Sum_probs=32.8
Q ss_pred CCccChhhhhhccCcccCCCCCceeEecCCccchhhhh
Q 002944 665 NSEVSPSQFEAHAGWASRRKPFQHIYTSNGVSLHELSI 702 (863)
Q Consensus 665 n~~~SPSeFEaHAG~~srRkPy~sIytsnG~SL~elai 702 (863)
+.||||.+||..+|....++|..+|++ +|++|..+..
T Consensus 40 ~~w~TP~EFe~~~gk~~sKdWK~sIR~-~G~~L~~Lme 76 (97)
T 1oqj_A 40 DQLISPKHFVHLAGKSTLKDWKRAIRL-GGIMLRKMMD 76 (97)
T ss_dssp TEEECHHHHHHHTTCGGGSCHHHHSEE-TTEEHHHHHH
T ss_pred CEEEChHHHhhhcCcCCCCCcchheEE-CCeEHHHHHH
Confidence 579999999999999988999999987 8999987653
No 108
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=85.33 E-value=0.31 Score=44.56 Aligned_cols=34 Identities=26% Similarity=0.810 Sum_probs=26.6
Q ss_pred ceEEcCCCCCccccCCCCCCC--C----CCCCcccccccc
Q 002944 727 DLLCCDSCPRAFHIDCVSLPG--I----PSGTWHCRYCMN 760 (863)
Q Consensus 727 dLL~CD~CpraFH~~CL~L~~--v----P~G~W~C~~C~~ 760 (863)
.|+.|+.|++.||..|+++.. + ....|.|+.|..
T Consensus 74 ~m~~C~~C~~~~H~~C~~~~~~~~~~~~~~~~~~C~~C~~ 113 (117)
T 4bbq_A 74 KLMECCICNEIVHPGCLQMDGEGLLNEELPNCWECPKCYQ 113 (117)
T ss_dssp SCEEETTTCCEECGGGCCSCCCCEECSSSSSEEECTTTC-
T ss_pred ceEEeeecCCeEECCCCCCCccccccccCCCCeECCCCcC
Confidence 489999999999999997542 2 234599999985
No 109
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=81.18 E-value=0.43 Score=54.86 Aligned_cols=38 Identities=21% Similarity=0.335 Sum_probs=28.2
Q ss_pred CCCceEecccccccccccccccCCCCCCC-CCCCCcceeeee
Q 002944 821 GRRTVILCDQCEREYHVGCLKDHGMEDLQ-VPQLLVYDTISF 861 (863)
Q Consensus 821 ~~gtII~CDqCeraYHV~CLr~aGL~dLK-lPe~~wy~~iC~ 861 (863)
.+..+|.||.|..|||..|+. +..-. -+.+.|+|+.|-
T Consensus 54 ~~~~mI~CD~C~~WfH~~CVg---i~~~~a~~~~~y~Cp~C~ 92 (528)
T 3pur_A 54 NDFQWIGCDSCQTWYHFLCSG---LEQFEYYLYEKFFCPKCV 92 (528)
T ss_dssp STTSEEECTTTCCEEEGGGTT---CCGGGTTTEEECCCTTTH
T ss_pred cCCCEEECCCCCcCCCCcCCC---CChhHhcCCCeEECcCCc
Confidence 357899999999999999997 22211 234778888883
No 110
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=80.21 E-value=0.35 Score=43.84 Aligned_cols=35 Identities=29% Similarity=0.764 Sum_probs=28.5
Q ss_pred eEEcCCCCCccccCCCCCC--------CCC-CCCcccccccccc
Q 002944 728 LLCCDSCPRAFHIDCVSLP--------GIP-SGTWHCRYCMNTF 762 (863)
Q Consensus 728 LL~CD~CpraFH~~CL~L~--------~vP-~G~W~C~~C~~~~ 762 (863)
|+.||.|...||..|.++. ..| .-.|.|+.|....
T Consensus 2 mi~c~~c~~w~H~~c~~~~~~~~~~l~~lp~~~~~~c~~C~~~~ 45 (140)
T 2ku7_A 2 MMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERH 45 (140)
T ss_dssp CCCCSCCSSCHHHHHCCCCHHHHHHHHSSCTTTTCCSSCCTTTS
T ss_pred ccccccCCCccCCcccccCHHHHHHHhhccccceeeCccccccc
Confidence 6899999999999999865 345 4579999998643
No 111
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=69.09 E-value=1.3 Score=43.87 Aligned_cols=48 Identities=25% Similarity=0.490 Sum_probs=37.6
Q ss_pred cCccccCCCCCcCCCCCCCCceEecc--cccccccccccccC-CCCCCC--CCCCCcceeee
Q 002944 804 LGGCVLCRGRDFCKSRFGRRTVILCD--QCEREYHVGCLKDH-GMEDLQ--VPQLLVYDTIS 860 (863)
Q Consensus 804 ~~~C~ICkk~dfsks~f~~gtII~CD--qCeraYHV~CLr~a-GL~dLK--lPe~~wy~~iC 860 (863)
...|.+|.. +++++.|| .|.+.|-..|+... |...++ +.++-|.||+|
T Consensus 79 ~~yC~wC~~---------Gg~l~~Cdn~~C~r~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C 131 (159)
T 3a1b_A 79 QSYCTICCG---------GREVLMCGNNNCCRCFCVECVDLLVGPGAAQAAIKEDPWNCYMC 131 (159)
T ss_dssp BSSCTTTSC---------CSEEEECSSTTTCCEEEHHHHHHHTCTTHHHHHHTSSSCCCTTT
T ss_pred cceeeEecC---------CCeEEeeCCCCCCCchhHHHHHHhcCHhHHHHHhccCCCEEEec
Confidence 346999986 47999999 89999999998743 232344 77899999988
No 112
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=63.30 E-value=0.57 Score=42.19 Aligned_cols=96 Identities=22% Similarity=0.554 Sum_probs=54.9
Q ss_pred ccccccccccC-------CceEEcCCCCCccccCCCCCCCCCCCCcccccccccccchhhhhccccccccCcccccCchh
Q 002944 715 NDDLCGICMDG-------GDLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYCMNTFQKEKFVEYNANARAAGRIEGVDPFA 787 (863)
Q Consensus 715 ndd~C~VC~dg-------GdLL~CD~CpraFH~~CL~L~~vP~G~W~C~~C~~~~~keKfve~n~nava~Gri~GvdPie 787 (863)
+...|.+|.+. +..+.--.|...||..|+...- ...-.||.|+..+......
T Consensus 6 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~--~~~~~CP~Cr~~~~~~~l~------------------- 64 (133)
T 4ap4_A 6 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSL--KNANTCPTCRKKINHKRYH------------------- 64 (133)
T ss_dssp CSCBCTTTCCBHHHHHHTTCCEEEETTCCEEEHHHHHHHH--TTCSBCTTTCCBCTTTCEE-------------------
T ss_pred CCCCCcccChhhhCccccccCeEecCCCChhhHHHHHHHH--HhCCCCCCCCCcCcccccc-------------------
Confidence 34679999863 3444556899999999995110 0123899998754321100
Q ss_pred cccccccccccCCCCCcCccccCCCCCcCCCCCCCCceEeccccccccccccccc
Q 002944 788 QMVSRCIRIVQTPDTELGGCVLCRGRDFCKSRFGRRTVILCDQCEREYHVGCLKD 842 (863)
Q Consensus 788 Qi~kRC~RIvk~~~~e~~~C~ICkk~dfsks~f~~gtII~CDqCeraYHV~CLr~ 842 (863)
++. .......|.+|... +.. ....+..+....|+..||..|+.+
T Consensus 65 -------~l~--i~~~~~~C~iC~~~-~~~-~~~~~~~~~~~~CgH~fc~~Ci~~ 108 (133)
T 4ap4_A 65 -------PIY--IGSGTVSCPICMDG-YSE-IVQNGRLIVSTECGHVFCSQCLRD 108 (133)
T ss_dssp -------ECB--CSSSSCBCTTTCCB-HHH-HHHTTCCEEEETTSBEEEHHHHHH
T ss_pred -------ccc--cCCCCCCCCCCCCc-ccc-ccccCcceEeCCCCChhhHHHHHH
Confidence 000 01234459999873 111 000123345567999999999863
No 113
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=62.31 E-value=3.1 Score=41.83 Aligned_cols=39 Identities=26% Similarity=0.642 Sum_probs=29.0
Q ss_pred cccCCc----eEEcCCCCCccccCCCCCCC---CC---CCCcccccccc
Q 002944 722 CMDGGD----LLCCDSCPRAFHIDCVSLPG---IP---SGTWHCRYCMN 760 (863)
Q Consensus 722 C~dgGd----LL~CD~CpraFH~~CL~L~~---vP---~G~W~C~~C~~ 760 (863)
|+.+|+ +|.|+.|.+-||..|+.... +| -..+.|..|..
T Consensus 10 CG~~~~~~~~mLqC~~C~qWFH~~Cl~~~~~~~lp~~~fY~F~C~~C~~ 58 (177)
T 3rsn_A 10 EENGRQLGEVELQCGICTKWFTADTFGIDTSSCLPFMTNYSFHCNVCHH 58 (177)
T ss_dssp -CTTCCTTSCEEECTTTCCEEEGGGGTCCCTTCCTTCCSEEEECTTTST
T ss_pred cCCCCCCCceeEeeccccceecHHHhcccccCccccceeEEEEccccCC
Confidence 666654 89999999999999996322 33 34678999976
No 114
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=56.94 E-value=4.8 Score=39.45 Aligned_cols=34 Identities=18% Similarity=0.370 Sum_probs=25.1
Q ss_pred cccceecccCCccccCC-------ccccccccccccccccc
Q 002944 516 KKANFCLNCRVSFSNAG-------VEELMLLCKSCVELKES 549 (863)
Q Consensus 516 ~k~~~C~~C~~sf~~a~-------~g~~~~lC~sC~~sk~s 549 (863)
.+..+|+.|+..||..| ++.+.|+|..|.....+
T Consensus 14 g~ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~~~~ 54 (184)
T 3o36_A 14 GELLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFCRDLSKP 54 (184)
T ss_dssp SSCEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSSSC
T ss_pred CeeeecCCCCcccCccccCCCCCCCCCCCEECccccCcccc
Confidence 45778888888888777 34677888888766443
No 115
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=56.73 E-value=2.3 Score=36.78 Aligned_cols=47 Identities=21% Similarity=0.489 Sum_probs=32.3
Q ss_pred cccccccccccCC-ceEEcCCCCCccccCCCCCCCCCCCCcccccccc
Q 002944 714 ENDDLCGICMDGG-DLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYCMN 760 (863)
Q Consensus 714 endd~C~VC~dgG-dLL~CD~CpraFH~~CL~L~~vP~G~W~C~~C~~ 760 (863)
+..+.|.+|.+-- .-+.|..|...||..|+.-.-...+.-.||.|+.
T Consensus 13 ~~i~~C~IC~~~i~~g~~C~~C~h~fH~~Ci~kWl~~~~~~~CP~Cr~ 60 (74)
T 2ct0_A 13 DAVKICNICHSLLIQGQSCETCGIRMHLPCVAKYFQSNAEPRCPHCND 60 (74)
T ss_dssp SSSCBCSSSCCBCSSSEECSSSCCEECHHHHHHHSTTCSSCCCTTTCS
T ss_pred CCCCcCcchhhHcccCCccCCCCchhhHHHHHHHHHhcCCCCCCCCcC
Confidence 3457799998642 2357889999999999962212222357999986
No 116
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=55.59 E-value=4.3 Score=31.37 Aligned_cols=45 Identities=22% Similarity=0.505 Sum_probs=30.3
Q ss_pred ccccccccccCC----ceEEcCCCCCccccCCCCCCCCCCCCccccccccc
Q 002944 715 NDDLCGICMDGG----DLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYCMNT 761 (863)
Q Consensus 715 ndd~C~VC~dgG----dLL~CD~CpraFH~~CL~L~~vP~G~W~C~~C~~~ 761 (863)
.+..|.+|.+.- .......|...||..|+.... .....||.|+..
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~--~~~~~CP~Cr~~ 52 (55)
T 1iym_A 4 DGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWL--GSHSTCPLCRLT 52 (55)
T ss_dssp CSCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTT--TTCCSCSSSCCC
T ss_pred CCCcCccCCccccCCCceEECCCCCCcccHHHHHHHH--HcCCcCcCCCCE
Confidence 456799998642 244445699999999995211 124579999863
No 117
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=55.35 E-value=0.64 Score=38.45 Aligned_cols=48 Identities=23% Similarity=0.342 Sum_probs=30.7
Q ss_pred cccccccccccCC--ce-EEc--CCCCCccccCCCCCCCCCCCCccccccccc
Q 002944 714 ENDDLCGICMDGG--DL-LCC--DSCPRAFHIDCVSLPGIPSGTWHCRYCMNT 761 (863)
Q Consensus 714 endd~C~VC~dgG--dL-L~C--D~CpraFH~~CL~L~~vP~G~W~C~~C~~~ 761 (863)
+..+.|.||...+ .| .-| .+.-+.||..|+.......+.+.|+.|+..
T Consensus 4 ~~~~~CrIC~~~~~~~l~~PC~C~gs~~~~H~~Cl~~W~~~~~~~~C~~C~~~ 56 (60)
T 1vyx_A 4 EDVPVCWICNEELGNERFRACGCTGELENVHRSCLSTWLTISRNTACQICGVV 56 (60)
T ss_dssp CSCCEETTTTEECSCCCCCSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCCB
T ss_pred CCCCEeEEeecCCCCceecCcCCCCchhhhHHHHHHHHHHhCCCCccCCCCCe
Confidence 4557899998543 23 232 333459999999633222356899999864
No 118
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=53.62 E-value=1.7 Score=37.75 Aligned_cols=50 Identities=26% Similarity=0.518 Sum_probs=31.2
Q ss_pred ccccccccccccC----CceEE---cCCCCCccccCCCCCCCCCCCCcccccccccc
Q 002944 713 KENDDLCGICMDG----GDLLC---CDSCPRAFHIDCVSLPGIPSGTWHCRYCMNTF 762 (863)
Q Consensus 713 ~endd~C~VC~dg----GdLL~---CD~CpraFH~~CL~L~~vP~G~W~C~~C~~~~ 762 (863)
....+.|.||.+. +.|+. |.+....||..|+...-.-.+...|+.|+..+
T Consensus 12 ~~~~~~C~IC~~~~~~~~~l~~pC~C~Gs~h~fH~~Cl~~Wl~~~~~~~CplCr~~~ 68 (80)
T 2d8s_A 12 PSSQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEF 68 (80)
T ss_dssp CTTSCCCSSSCCCCCSSSCEECSSSCCSSSCCEETTHHHHHHHHHCCSBCSSSCCBC
T ss_pred CCCCCCCeEcCccccCCCeeEeccccCCcCCeeCHHHHHHHHhhCCCCCCCCCCCee
Confidence 3456789999853 23432 22334999999996221112346899999743
No 119
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=53.33 E-value=2.5 Score=47.02 Aligned_cols=48 Identities=17% Similarity=0.332 Sum_probs=36.1
Q ss_pred cCccccCCCCCcCCCCCCCCceEecc--cccccccccccccCC-CCCCC--CCCCCcceeee
Q 002944 804 LGGCVLCRGRDFCKSRFGRRTVILCD--QCEREYHVGCLKDHG-MEDLQ--VPQLLVYDTIS 860 (863)
Q Consensus 804 ~~~C~ICkk~dfsks~f~~gtII~CD--qCeraYHV~CLr~aG-L~dLK--lPe~~wy~~iC 860 (863)
...|.+|.. +++++.|| .|.+.|...|+...- -..++ .-.+-|.||+|
T Consensus 93 ~~yCr~C~~---------Gg~l~~Cdn~~C~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C 145 (386)
T 2pv0_B 93 QSYCSICCS---------GETLLICGNPDCTRCYCFECVDSLVGPGTSGKVHAMSNWVCYLC 145 (386)
T ss_dssp BCSCTTTCC---------CSSCEECCSTTCCCEECHHHHHHHTCTTHHHHHHHCSSCCCTTT
T ss_pred cccceEcCC---------CCeEEEeCCCCCCcchHHHHHHHhcChhHHHHhhccCCceEEEc
Confidence 445999986 46899999 999999999997432 22233 45588888888
No 120
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.21 E-value=3.4 Score=34.28 Aligned_cols=46 Identities=28% Similarity=0.572 Sum_probs=30.6
Q ss_pred ccccccccccc---CCceEEcCCCCCccccCCCCCCCCCCCCccccccccc
Q 002944 714 ENDDLCGICMD---GGDLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYCMNT 761 (863)
Q Consensus 714 endd~C~VC~d---gGdLL~CD~CpraFH~~CL~L~~vP~G~W~C~~C~~~ 761 (863)
..+..|.+|.+ .++.+..-.|...||..|+.... .....||.|+..
T Consensus 21 ~~~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~--~~~~~CP~Cr~~ 69 (75)
T 1x4j_A 21 SEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWL--KANRTCPICRAD 69 (75)
T ss_dssp SSCCEETTTTEECCBTCEEEEETTTEEEETTHHHHHH--HHCSSCTTTCCC
T ss_pred CCCCCCeECCcccCCCCeEEEECCCCHhHHHHHHHHH--HcCCcCcCcCCc
Confidence 45578999995 34444555699999999995210 012479999864
No 121
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=49.09 E-value=6.3 Score=39.47 Aligned_cols=31 Identities=16% Similarity=0.351 Sum_probs=21.9
Q ss_pred ccceecccCCccccCC-------ccccccccccccccc
Q 002944 517 KANFCLNCRVSFSNAG-------VEELMLLCKSCVELK 547 (863)
Q Consensus 517 k~~~C~~C~~sf~~a~-------~g~~~~lC~sC~~sk 547 (863)
...+|+.|+..||..| ++.+.|+|+.|....
T Consensus 18 ~ll~Cd~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~ 55 (207)
T 3u5n_A 18 DLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIG 55 (207)
T ss_dssp EEEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSS
T ss_pred ceEEcCCCCCccCCccCCCCCCCCCCCCEEeCceeCcc
Confidence 4667888888888766 345678888887654
No 122
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=48.84 E-value=4.7 Score=32.69 Aligned_cols=47 Identities=26% Similarity=0.502 Sum_probs=30.6
Q ss_pred ccccccccccccC---CceEEcCCCCCccccCCCCCCCCCCCCccccccccc
Q 002944 713 KENDDLCGICMDG---GDLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYCMNT 761 (863)
Q Consensus 713 ~endd~C~VC~dg---GdLL~CD~CpraFH~~CL~L~~vP~G~W~C~~C~~~ 761 (863)
...+..|.||.+. ++.+..-.|...||..|+..... ....||.|+..
T Consensus 11 ~~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~--~~~~CP~Cr~~ 60 (69)
T 2kiz_A 11 EDTEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLI--TNKKCPICRVD 60 (69)
T ss_dssp TTCCCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHH--HCSBCTTTCSB
T ss_pred CCCCCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHH--cCCCCcCcCcc
Confidence 4456789999753 34445556999999999951100 02359999864
No 123
>1h5p_A Nuclear autoantigen SP100-B; transcription, DNA binding, SAND domain, KDWK, nuclear protein, alternative splicing; NMR {Homo sapiens} SCOP: d.217.1.1
Probab=48.24 E-value=5.6 Score=36.41 Aligned_cols=50 Identities=22% Similarity=0.278 Sum_probs=34.1
Q ss_pred CeEEeecCCCCCCeeeChhhHhhhcCCCCCCCCCceeccCCCcHHHHHHH
Q 002944 444 SGISCFCDDCKGNQVVTPAVFELHAGSSNKRPPEYIYLENGKTLRDIMNV 493 (863)
Q Consensus 444 ~GIlC~Cc~C~g~kVvS~s~FE~HAGs~~r~P~~~IyLeNGkSL~dvl~a 493 (863)
.|+.=-|-..+.-+-+||.+||.+||..+-.-|.-=-.=+|.+|.-+|+.
T Consensus 30 ~G~~~KCI~~~~g~w~TP~EFe~~~g~~~sKdWKrSIR~~G~~L~~Lme~ 79 (95)
T 1h5p_A 30 QGTSKKCIQSEDKKWFTPREFEIEGDRGASKNWKLSIRCGGYTLKVLMEN 79 (95)
T ss_dssp TGGGSCCEEETTTEEECHHHHHHHHTCSTTCCHHHHCEETTEEHHHHHHH
T ss_pred CCCCccCeEeCCCeEEChHHhhhhcCcccCcCcceeeEECCEEHHHHHHC
Confidence 44443444332337899999999999876444544334579999999876
No 124
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=47.74 E-value=8.9 Score=38.19 Aligned_cols=31 Identities=23% Similarity=0.388 Sum_probs=23.6
Q ss_pred cccceecccCCccccCC-------cccccccccccccc
Q 002944 516 KKANFCLNCRVSFSNAG-------VEELMLLCKSCVEL 546 (863)
Q Consensus 516 ~k~~~C~~C~~sf~~a~-------~g~~~~lC~sC~~s 546 (863)
.....|+.|...||..| ++.+.|+|..|...
T Consensus 12 g~ll~Cd~C~~~~H~~Cl~p~l~~~p~g~W~C~~C~~~ 49 (189)
T 2ro1_A 12 GDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVL 49 (189)
T ss_dssp SSCCCCTTTCCBCCSTTSTTCCSSCCCTTCCTTTTSCS
T ss_pred CceeECCCCCchhccccCCCCcccCCCCCCCCcCccCC
Confidence 45778888888888776 35678888888765
No 125
>1ufn_A Putative nuclear protein homolog 5830484A20RIK; SAND domain, KDWK motif, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.217.1.1
Probab=47.30 E-value=6.3 Score=36.02 Aligned_cols=36 Identities=25% Similarity=0.256 Sum_probs=28.4
Q ss_pred eeeChhhHhhhcCCCCCCCC-CceeccCCCcHHHHHHH
Q 002944 457 QVVTPAVFELHAGSSNKRPP-EYIYLENGKTLRDIMNV 493 (863)
Q Consensus 457 kVvS~s~FE~HAGs~~r~P~-~~IyLeNGkSL~dvl~a 493 (863)
+-+||.+||..||..+-.-| ..|+. +|++|.-+|+.
T Consensus 48 ~w~TP~EFe~~~g~~~sKdWKrSIr~-~G~~Lr~Lme~ 84 (94)
T 1ufn_A 48 DWLTVKEFLNEGGRATSKDWKGVIRC-NGETLRHLEQK 84 (94)
T ss_dssp CEECHHHHHHHHTCTTCSCHHHHCEE-TTEEHHHHHHT
T ss_pred cEEChHHhhhhcCcccccCcceeeEE-CCEeHHHHHHC
Confidence 68999999999998754334 45555 89999998775
No 126
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=46.54 E-value=3.4 Score=36.86 Aligned_cols=48 Identities=27% Similarity=0.596 Sum_probs=31.1
Q ss_pred ccccccccccCC------------------ceEEcCCCCCccccCCCCCC---CCCCCCcccccccccc
Q 002944 715 NDDLCGICMDGG------------------DLLCCDSCPRAFHIDCVSLP---GIPSGTWHCRYCMNTF 762 (863)
Q Consensus 715 ndd~C~VC~dgG------------------dLL~CD~CpraFH~~CL~L~---~vP~G~W~C~~C~~~~ 762 (863)
.++.|.||.+.- ..+.--.|...||..|+... ........||.|+..+
T Consensus 24 ~~~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~ 92 (114)
T 1v87_A 24 PEEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIY 92 (114)
T ss_dssp CSCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBS
T ss_pred CCCcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHcccCCCCCcCCCCCCcc
Confidence 346899997541 12224569999999999521 1123456899999754
No 127
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=43.75 E-value=9.1 Score=31.12 Aligned_cols=49 Identities=20% Similarity=0.603 Sum_probs=32.6
Q ss_pred ccccccccccccCC-ceEEcCCCCCccccCCCCC-CCCCCCCcccccccccc
Q 002944 713 KENDDLCGICMDGG-DLLCCDSCPRAFHIDCVSL-PGIPSGTWHCRYCMNTF 762 (863)
Q Consensus 713 ~endd~C~VC~dgG-dLL~CD~CpraFH~~CL~L-~~vP~G~W~C~~C~~~~ 762 (863)
...+..|.+|.+.- +.+.- .|...||..|+.. .....+...||.|+..+
T Consensus 17 ~~~~~~C~IC~~~~~~~~~~-~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~ 67 (73)
T 2ysl_A 17 LQEEVICPICLDILQKPVTI-DCGHNFCLKCITQIGETSCGFFKCPLCKTSV 67 (73)
T ss_dssp CCCCCBCTTTCSBCSSEEEC-TTCCEEEHHHHHHHCSSSCSCCCCSSSCCCC
T ss_pred CccCCEeccCCcccCCeEEc-CCCChhhHHHHHHHHHcCCCCCCCCCCCCcC
Confidence 34457899999754 22222 8999999999952 12223567899999754
No 128
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=42.65 E-value=7.5 Score=43.07 Aligned_cols=48 Identities=25% Similarity=0.708 Sum_probs=31.2
Q ss_pred cccccccccc----CCce--EEcC--CCCCccccCCCCC--CCCC-------CCCcccccccccc
Q 002944 715 NDDLCGICMD----GGDL--LCCD--SCPRAFHIDCVSL--PGIP-------SGTWHCRYCMNTF 762 (863)
Q Consensus 715 ndd~C~VC~d----gGdL--L~CD--~CpraFH~~CL~L--~~vP-------~G~W~C~~C~~~~ 762 (863)
....|.+|-. .|.+ ..|+ .|...||..|+.- ...+ .-.-.||.|+.+.
T Consensus 307 ~~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~pI 371 (381)
T 3k1l_B 307 EELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAKL 371 (381)
T ss_dssp SCCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCEE
T ss_pred CCccCcccceeecCCCCCccccccCCccCCccchHHHHHHHHhCCCccccccccCCCCCCCCCcC
Confidence 4457999985 2433 4788 7999999999941 0101 1123499999754
No 129
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=42.32 E-value=6.2 Score=33.63 Aligned_cols=27 Identities=26% Similarity=0.675 Sum_probs=19.8
Q ss_pred CCCCCccccCCCC--CCCCCCCCcccccccccc
Q 002944 732 DSCPRAFHIDCVS--LPGIPSGTWHCRYCMNTF 762 (863)
Q Consensus 732 D~CpraFH~~CL~--L~~vP~G~W~C~~C~~~~ 762 (863)
..|...||..|+. +..- -.||.|+...
T Consensus 46 ~~C~H~FH~~Ci~~Wl~~~----~~CP~CR~~~ 74 (81)
T 2ecl_A 46 GECNHSFHNCCMSLWVKQN----NRCPLCQQDW 74 (81)
T ss_dssp ETTSCEEEHHHHHHHTTTC----CBCTTTCCBC
T ss_pred CCCCCccChHHHHHHHHhC----CCCCCcCCCc
Confidence 3699999999995 2221 2799999754
No 130
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=42.26 E-value=10 Score=32.74 Aligned_cols=30 Identities=20% Similarity=0.496 Sum_probs=23.3
Q ss_pred cCccccCCCCCcCCCCCCCCceEecccccccccccccc
Q 002944 804 LGGCVLCRGRDFCKSRFGRRTVILCDQCEREYHVGCLK 841 (863)
Q Consensus 804 ~~~C~ICkk~dfsks~f~~gtII~CDqCeraYHV~CLr 841 (863)
...|.||+..- . .-+.|..|...||..|+.
T Consensus 15 i~~C~IC~~~i------~--~g~~C~~C~h~fH~~Ci~ 44 (74)
T 2ct0_A 15 VKICNICHSLL------I--QGQSCETCGIRMHLPCVA 44 (74)
T ss_dssp SCBCSSSCCBC------S--SSEECSSSCCEECHHHHH
T ss_pred CCcCcchhhHc------c--cCCccCCCCchhhHHHHH
Confidence 45699999842 1 236788999999999996
No 131
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=40.77 E-value=9.3 Score=31.63 Aligned_cols=47 Identities=19% Similarity=0.418 Sum_probs=30.5
Q ss_pred cccccccccccC---CceEEcCCCCCccccCCCCCCCCCCCCcccccccccc
Q 002944 714 ENDDLCGICMDG---GDLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYCMNTF 762 (863)
Q Consensus 714 endd~C~VC~dg---GdLL~CD~CpraFH~~CL~L~~vP~G~W~C~~C~~~~ 762 (863)
..+..|.||.+. +..+.--.|...||..|+.-.. .....||.|+..+
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~--~~~~~CP~Cr~~~ 62 (78)
T 2ect_A 13 GSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWL--EQHDSCPVCRKSL 62 (78)
T ss_dssp SSSCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHH--TTTCSCTTTCCCC
T ss_pred CCCCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHH--HcCCcCcCcCCcc
Confidence 445789999754 2333333589999999995111 1125799999754
No 132
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=38.61 E-value=7.3 Score=36.38 Aligned_cols=27 Identities=26% Similarity=0.380 Sum_probs=0.0
Q ss_pred CCCCccccCCCCCCCCCCCCccccccccc
Q 002944 733 SCPRAFHIDCVSLPGIPSGTWHCRYCMNT 761 (863)
Q Consensus 733 ~CpraFH~~CL~L~~vP~G~W~C~~C~~~ 761 (863)
.|...||..|+...-.. .-.||.|+..
T Consensus 83 ~C~H~FH~~CI~~Wl~~--~~~CP~Cr~~ 109 (117)
T 4a0k_B 83 VCNHAFHFHCISRWLKT--RQVCPLDNRE 109 (117)
T ss_dssp -----------------------------
T ss_pred CcCceEcHHHHHHHHHc--CCcCCCCCCe
Confidence 68999999999632111 3469999864
No 133
>1weq_A PHD finger protein 7; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=37.32 E-value=18 Score=32.44 Aligned_cols=33 Identities=36% Similarity=0.872 Sum_probs=27.4
Q ss_pred ceEEcCCCC-CccccCCCCCCCCCCCCcccccccc
Q 002944 727 DLLCCDSCP-RAFHIDCVSLPGIPSGTWHCRYCMN 760 (863)
Q Consensus 727 dLL~CD~Cp-raFH~~CL~L~~vP~G~W~C~~C~~ 760 (863)
.|++|..|. ..-|..|..+.. ....|.|..|..
T Consensus 45 ~L~lC~~Cgs~gtH~~Cs~l~~-~~~~weC~~C~~ 78 (85)
T 1weq_A 45 RLILCATCGSHGTHRDCSSLRP-NSKKWECNECLP 78 (85)
T ss_dssp BCEECSSSCCCEECSGGGTCCT-TCSCCCCTTTSC
T ss_pred EEEeCcccCCchhHHHHhCCcC-CCCCEECCcCcc
Confidence 689999998 678999998743 456899999985
No 134
>1oqj_A Glucocorticoid modulatory element binding protein-1; SAND domain, alpha-beta fold, KDWK motif, zinc-binding motif, DNA binding protein; 1.55A {Homo sapiens} SCOP: d.217.1.1
Probab=36.75 E-value=8.4 Score=35.37 Aligned_cols=56 Identities=23% Similarity=0.337 Sum_probs=36.6
Q ss_pred eeEEEe-----CCeEEeecCCCCCCeeeChhhHhhhcCCCCCCCCCceeccCCCcHHHHHHH
Q 002944 437 LRGVVK-----GSGISCFCDDCKGNQVVTPAVFELHAGSSNKRPPEYIYLENGKTLRDIMNV 493 (863)
Q Consensus 437 L~G~I~-----~~GIlC~Cc~C~g~kVvS~s~FE~HAGs~~r~P~~~IyLeNGkSL~dvl~a 493 (863)
++|++. ..|+.=-|-..++ +-+||.+||.+||..+-+-|.-=-.-+|++|..+|+.
T Consensus 17 ~~GiL~~~kf~~~G~~~KCI~~~~-~w~TP~EFe~~~gk~~sKdWK~sIR~~G~~L~~Lme~ 77 (97)
T 1oqj_A 17 SKAILLWKKFVCPGINVKCVKFND-QLISPKHFVHLAGKSTLKDWKRAIRLGGIMLRKMMDS 77 (97)
T ss_dssp EEEEEEGGGCCTTCTTSCCEEETT-EEECHHHHHHHTTCGGGSCHHHHSEETTEEHHHHHHT
T ss_pred eEEEEEhhhhccCCCCccCccCCC-EEEChHHHhhhcCcCCCCCcchheEECCeEHHHHHHC
Confidence 456543 3454444544343 7899999999999754333543344589999988765
No 135
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=36.29 E-value=29 Score=27.34 Aligned_cols=42 Identities=14% Similarity=0.309 Sum_probs=27.6
Q ss_pred ccccccccccCCceEEcCCCCCccccCCCCCCCCCCCCccccccccc
Q 002944 715 NDDLCGICMDGGDLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYCMNT 761 (863)
Q Consensus 715 ndd~C~VC~dgGdLL~CD~CpraFH~~CL~L~~vP~G~W~C~~C~~~ 761 (863)
....|.+|.+.-.-..--.|...|+..|+.. ....||.|+..
T Consensus 5 ~~~~C~IC~~~~~~p~~l~CgH~fC~~Ci~~-----~~~~CP~Cr~~ 46 (56)
T 1bor_A 5 QFLRCQQCQAEAKCPKLLPCLHTLCSGCLEA-----SGMQCPICQAP 46 (56)
T ss_dssp CCSSCSSSCSSCBCCSCSTTSCCSBTTTCSS-----SSSSCSSCCSS
T ss_pred cCCCceEeCCccCCeEEcCCCCcccHHHHcc-----CCCCCCcCCcE
Confidence 4456999987532212234888888888754 35579999864
No 136
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=34.40 E-value=4.3 Score=35.27 Aligned_cols=52 Identities=31% Similarity=0.549 Sum_probs=0.0
Q ss_pred CCccccccccccccC---CceEEcCCCCCccccCCCCCCCCCCCCcccccccccccc
Q 002944 711 SSKENDDLCGICMDG---GDLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYCMNTFQK 764 (863)
Q Consensus 711 s~~endd~C~VC~dg---GdLL~CD~CpraFH~~CL~L~~vP~G~W~C~~C~~~~~k 764 (863)
.....+..|.+|.+. ++.+..-.|...||..|+........ .||.|+..+..
T Consensus 35 ~~~~~~~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl~~~~--~CP~Cr~~~~~ 89 (91)
T 2l0b_A 35 GAVGQEMCCPICCSEYVKGDVATELPCHHYFHKPCVSIWLQKSG--TCPVCRCMFPP 89 (91)
T ss_dssp SSSSSCSEETTTTEECCTTCEEEEETTTEEEEHHHHHHHHTTTC--BCTTTCCBSSC
T ss_pred cccCCCCCCcccChhhcCCCcEEecCCCChHHHHHHHHHHHcCC--cCcCcCccCCC
No 137
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=33.41 E-value=7.2 Score=35.56 Aligned_cols=44 Identities=27% Similarity=0.608 Sum_probs=0.0
Q ss_pred ccccccccccccCCc------------------eEEcCCCCCccccCCCCCCCCCCCCcc-----ccccccccc
Q 002944 713 KENDDLCGICMDGGD------------------LLCCDSCPRAFHIDCVSLPGIPSGTWH-----CRYCMNTFQ 763 (863)
Q Consensus 713 ~endd~C~VC~dgGd------------------LL~CD~CpraFH~~CL~L~~vP~G~W~-----C~~C~~~~~ 763 (863)
+..++.|.+|.+.=+ .+.--.|...||..|+. .|+ ||.|+....
T Consensus 34 d~~~d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~-------~Wl~~~~~CP~Cr~~~~ 100 (106)
T 3dpl_R 34 DIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCIS-------RWLKTRQVCPLDNREWE 100 (106)
T ss_dssp SSCSCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHH-------HHHTTCSBCSSSCSBCC
T ss_pred CCCCCCCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHH-------HHHHcCCcCcCCCCcce
No 138
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.02 E-value=18 Score=29.77 Aligned_cols=34 Identities=29% Similarity=0.692 Sum_probs=23.5
Q ss_pred CcCccccCCCCCcCCCCCCCCceEeccccccccccccccc
Q 002944 803 ELGGCVLCRGRDFCKSRFGRRTVILCDQCEREYHVGCLKD 842 (863)
Q Consensus 803 e~~~C~ICkk~dfsks~f~~gtII~CDqCeraYHV~CLr~ 842 (863)
....|.||... +.....+..-.|...||..|+..
T Consensus 22 ~~~~C~IC~~~------~~~~~~~~~l~C~H~fh~~Ci~~ 55 (75)
T 1x4j_A 22 EQTLCVVCMCD------FESRQLLRVLPCNHEFHAKCVDK 55 (75)
T ss_dssp SCCEETTTTEE------CCBTCEEEEETTTEEEETTHHHH
T ss_pred CCCCCeECCcc------cCCCCeEEEECCCCHhHHHHHHH
Confidence 34569999863 23334444556999999999873
No 139
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=30.98 E-value=30 Score=26.49 Aligned_cols=33 Identities=15% Similarity=0.431 Sum_probs=22.5
Q ss_pred CccccCCCCCcCCCCCCCCceEeccccccccccccccc
Q 002944 805 GGCVLCRGRDFCKSRFGRRTVILCDQCEREYHVGCLKD 842 (863)
Q Consensus 805 ~~C~ICkk~dfsks~f~~gtII~CDqCeraYHV~CLr~ 842 (863)
..|.||...- . .+...+....|...||..|+..
T Consensus 6 ~~C~IC~~~~-~----~~~~~~~~~~C~H~f~~~Ci~~ 38 (55)
T 1iym_A 6 VECAVCLAEL-E----DGEEARFLPRCGHGFHAECVDM 38 (55)
T ss_dssp CCCTTTCCCC-C----TTSCCEECSSSCCEECTTHHHH
T ss_pred CcCccCCccc-c----CCCceEECCCCCCcccHHHHHH
Confidence 3599998732 1 1233455557999999999974
No 140
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.41 E-value=11 Score=29.99 Aligned_cols=47 Identities=28% Similarity=0.625 Sum_probs=30.9
Q ss_pred cccccccccccC-------CceEEcCCCCCccccCCCCCCCCCCCCcccccccccc
Q 002944 714 ENDDLCGICMDG-------GDLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYCMNTF 762 (863)
Q Consensus 714 endd~C~VC~dg-------GdLL~CD~CpraFH~~CL~L~~vP~G~W~C~~C~~~~ 762 (863)
.....|.||.+. +..+.--.|...||..|+.... .....||.|+..+
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~--~~~~~CP~Cr~~~ 66 (69)
T 2ea6_A 13 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSL--KNANTCPTCRKKI 66 (69)
T ss_dssp TCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHH--HHCSSCTTTCCCC
T ss_pred CCCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHH--HcCCCCCCCCCcc
Confidence 445779999863 3444556899999999995110 0023699998643
No 141
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=30.20 E-value=11 Score=30.44 Aligned_cols=48 Identities=27% Similarity=0.617 Sum_probs=32.1
Q ss_pred cccccccccccC-------CceEEcCCCCCccccCCCCCCCCCCCCccccccccccc
Q 002944 714 ENDDLCGICMDG-------GDLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYCMNTFQ 763 (863)
Q Consensus 714 endd~C~VC~dg-------GdLL~CD~CpraFH~~CL~L~~vP~G~W~C~~C~~~~~ 763 (863)
..+..|.+|.+. ++.+..-.|...||..|+.... ...-.||.|+..+.
T Consensus 8 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~--~~~~~CP~Cr~~~~ 62 (71)
T 3ng2_A 8 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSL--KNANTCPTCRKKIN 62 (71)
T ss_dssp TTCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHH--HHCSBCTTTCCBCC
T ss_pred CCCCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHH--HcCCCCCCCCCccC
Confidence 345779999863 3455667899999999995110 01137999987543
No 142
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=29.59 E-value=11 Score=38.93 Aligned_cols=45 Identities=22% Similarity=0.492 Sum_probs=33.0
Q ss_pred cccccccccC-CceEEcCCCCCccccCCCCCCCCCCCCcccccccc
Q 002944 716 DDLCGICMDG-GDLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYCMN 760 (863)
Q Consensus 716 dd~C~VC~dg-GdLL~CD~CpraFH~~CL~L~~vP~G~W~C~~C~~ 760 (863)
-..|.+|.+- -.-..|..|+..||..|+.-.....+.-.||.|..
T Consensus 180 i~~C~iC~~iv~~g~~C~~C~~~~H~~C~~~~~~~~~~~~CP~C~~ 225 (238)
T 3nw0_A 180 VKICNICHSLLIQGQSCETCGIRMHLPCVAKYFQSNAEPRCPHCND 225 (238)
T ss_dssp CCBCTTTCSBCSSCEECSSSCCEECHHHHHHHTTTCSSCBCTTTCC
T ss_pred CCcCcchhhHHhCCcccCccChHHHHHHHHHHHHhCCCCCCCCCCC
Confidence 5679999963 23478988999999999963222344567999976
No 143
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=29.39 E-value=25 Score=28.87 Aligned_cols=48 Identities=19% Similarity=0.497 Sum_probs=30.9
Q ss_pred ccccccccccCC-ceEEcCCCCCccccCCCCCCCC-----CCCCccccccccccc
Q 002944 715 NDDLCGICMDGG-DLLCCDSCPRAFHIDCVSLPGI-----PSGTWHCRYCMNTFQ 763 (863)
Q Consensus 715 ndd~C~VC~dgG-dLL~CD~CpraFH~~CL~L~~v-----P~G~W~C~~C~~~~~ 763 (863)
.+..|.+|.+.- +-+. -.|...||..|+.-... ..+...||.|+....
T Consensus 11 ~~~~C~IC~~~~~~p~~-l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~ 64 (79)
T 2egp_A 11 EEVTCPICLELLTEPLS-LDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYS 64 (79)
T ss_dssp CCCEETTTTEECSSCCC-CSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCC
T ss_pred cCCCCcCCCcccCCeeE-CCCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCC
Confidence 456799998642 1111 26899999999852211 134778999997543
No 144
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=28.34 E-value=16 Score=32.39 Aligned_cols=27 Identities=33% Similarity=0.834 Sum_probs=22.2
Q ss_pred cccccccc--CCceEEcCC--CCCccccCCC
Q 002944 717 DLCGICMD--GGDLLCCDS--CPRAFHIDCV 743 (863)
Q Consensus 717 d~C~VC~d--gGdLL~CD~--CpraFH~~CL 743 (863)
-.|.+|.. .|--+-|.. |.++||..|.
T Consensus 18 l~C~iC~~~~~GAciqC~~~~C~~~fHv~CA 48 (87)
T 2lq6_A 18 LTCYLCKQKGVGASIQCHKANCYTAFHVTCA 48 (87)
T ss_dssp CCBTTTTBCCSSCEEECSCTTTCCEEEHHHH
T ss_pred CCCcCCCCCCCcEeEecCCCCCCCcCcHHHH
Confidence 56999985 377788864 9999999887
No 145
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.21 E-value=12 Score=30.52 Aligned_cols=48 Identities=19% Similarity=0.385 Sum_probs=31.1
Q ss_pred cccccccccccCC-ceEEcCCCCCccccCCCCCCCCCCCCcccccccccccc
Q 002944 714 ENDDLCGICMDGG-DLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYCMNTFQK 764 (863)
Q Consensus 714 endd~C~VC~dgG-dLL~CD~CpraFH~~CL~L~~vP~G~W~C~~C~~~~~k 764 (863)
..+..|.+|.+.- +.+.- .|...||..|+.-... ....||.|+..+..
T Consensus 13 ~~~~~C~IC~~~~~~~~~~-~CgH~fC~~Ci~~~~~--~~~~CP~Cr~~~~~ 61 (71)
T 2d8t_A 13 LTVPECAICLQTCVHPVSL-PCKHVFCYLCVKGASW--LGKRCALCRQEIPE 61 (71)
T ss_dssp SSCCBCSSSSSBCSSEEEE-TTTEEEEHHHHHHCTT--CSSBCSSSCCBCCH
T ss_pred CCCCCCccCCcccCCCEEc-cCCCHHHHHHHHHHHH--CCCcCcCcCchhCH
Confidence 4456799998753 22222 5999999999852111 12689999976543
No 146
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=28.13 E-value=28 Score=28.03 Aligned_cols=33 Identities=15% Similarity=0.378 Sum_probs=21.8
Q ss_pred cCccccCCCCCcCCCCCCCCceEeccccccccccccccc
Q 002944 804 LGGCVLCRGRDFCKSRFGRRTVILCDQCEREYHVGCLKD 842 (863)
Q Consensus 804 ~~~C~ICkk~dfsks~f~~gtII~CDqCeraYHV~CLr~ 842 (863)
...|.||... +..+..+..-.|...||..|+..
T Consensus 14 ~~~C~IC~~~------~~~~~~~~~~~C~H~fc~~Ci~~ 46 (69)
T 2kiz_A 14 EEKCTICLSI------LEEGEDVRRLPCMHLFHQVCVDQ 46 (69)
T ss_dssp CCSBTTTTBC------CCSSSCEEECTTSCEEEHHHHHH
T ss_pred CCCCeeCCcc------ccCCCcEEEeCCCCHHHHHHHHH
Confidence 3459999873 22222334446999999999863
No 147
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=28.12 E-value=13 Score=29.84 Aligned_cols=46 Identities=20% Similarity=0.399 Sum_probs=30.4
Q ss_pred ccccccccccCC-ceEEcCCCCCccccCCCCCCCCCCCCcccccccccc
Q 002944 715 NDDLCGICMDGG-DLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYCMNTF 762 (863)
Q Consensus 715 ndd~C~VC~dgG-dLL~CD~CpraFH~~CL~L~~vP~G~W~C~~C~~~~ 762 (863)
.+..|.+|.+.- +-...-.|...||..|+.... .....||.|+...
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~C~H~fc~~Ci~~~~--~~~~~CP~Cr~~~ 50 (68)
T 1chc_A 4 VAERCPICLEDPSNYSMALPCLHAFCYVCITRWI--RQNPTCPLCKVPV 50 (68)
T ss_dssp CCCCCSSCCSCCCSCEEETTTTEEESTTHHHHHH--HHSCSTTTTCCCC
T ss_pred CCCCCeeCCccccCCcEecCCCCeeHHHHHHHHH--hCcCcCcCCChhh
Confidence 456899999764 323455699999999984110 1124799998643
No 148
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=26.91 E-value=34 Score=39.57 Aligned_cols=95 Identities=17% Similarity=0.346 Sum_probs=27.1
Q ss_pred cccccccccC--C---ceEEcCCCCCccccCCCCCCCCCCCCcccccccccccchhhhhccccccccCcccccCchhccc
Q 002944 716 DDLCGICMDG--G---DLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYCMNTFQKEKFVEYNANARAAGRIEGVDPFAQMV 790 (863)
Q Consensus 716 dd~C~VC~dg--G---dLL~CD~CpraFH~~CL~L~~vP~G~W~C~~C~~~~~keKfve~n~nava~Gri~GvdPieQi~ 790 (863)
..+|.+|++- | +-+.|..|.-..|..|.... + ..|....... ... . . .....
T Consensus 48 p~~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v--~------~~c~~~~~~~---~~~-~----~-----~~~h~-- 104 (674)
T 3pfq_A 48 PTFCSHCTDFIWGFGKQGFQCQVCSFVVHKRCHEFV--T------FSCPGADKGP---ASD-D----P-----RSKHK-- 104 (674)
T ss_dssp ---------------------------------------------------------------------------CCC--
T ss_pred CCccccccccccccCCceeECCCCCCCcChhhcCcC--c------ccCCCccccc---ccc-c----c-----cCCcc--
Confidence 4689999863 2 56889999999999998521 1 1222110000 000 0 0 00000
Q ss_pred ccccccccCCCCCcCccccCCCCCcCCCCCCCCceEeccccccccccccccc
Q 002944 791 SRCIRIVQTPDTELGGCVLCRGRDFCKSRFGRRTVILCDQCEREYHVGCLKD 842 (863)
Q Consensus 791 kRC~RIvk~~~~e~~~C~ICkk~dfsks~f~~gtII~CDqCeraYHV~CLr~ 842 (863)
.+.........|..|++.-. +. ...-+.|.-|..-+|..|...
T Consensus 105 -----~~~~~~~~~~~C~~C~~~l~---g~-~~qg~~C~~C~~~~H~~C~~~ 147 (674)
T 3pfq_A 105 -----FKIHTYSSPTFCDHCGSLLY---GL-IHQGMKCDTCMMNVHKRCVMN 147 (674)
T ss_dssp -----CCEECCSSCCCCSSSCSCCB---BS-SSCEECCSSSCCCBCSSTTSS
T ss_pred -----eeecCCCCCCCCCccccccc---hh-hcCccccccCCcchhhhhhhc
Confidence 01111223456999977321 11 236789999999999999864
No 149
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=26.77 E-value=9.4 Score=31.67 Aligned_cols=48 Identities=23% Similarity=0.504 Sum_probs=30.7
Q ss_pred cccccccccccCC-ceEEcCCCCCccccCCCCCCCCCCCCccccccccc
Q 002944 714 ENDDLCGICMDGG-DLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYCMNT 761 (863)
Q Consensus 714 endd~C~VC~dgG-dLL~CD~CpraFH~~CL~L~~vP~G~W~C~~C~~~ 761 (863)
..+..|.+|.+.- +-+.-..|...||..|+.......+...||.|+..
T Consensus 13 ~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~ 61 (74)
T 2yur_A 13 PDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQN 61 (74)
T ss_dssp CGGGSCSSSCCCCTTCEECSSSCCEECTTHHHHHHHHSSSSCCSSSCCS
T ss_pred CCCCCCcCCChHHhCCeEcCCCCCHHHHHHHHHHHHhcCCCcCCCCCCc
Confidence 4457799998753 33333348999999998421111234679999874
No 150
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.53 E-value=8.8 Score=31.12 Aligned_cols=46 Identities=24% Similarity=0.559 Sum_probs=31.0
Q ss_pred cccccccccccCCceEEcCCCCCccccCCCCCCCCCCCCcccccccccc
Q 002944 714 ENDDLCGICMDGGDLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYCMNTF 762 (863)
Q Consensus 714 endd~C~VC~dgGdLL~CD~CpraFH~~CL~L~~vP~G~W~C~~C~~~~ 762 (863)
.....|.+|.+.-.- .--.|...||..|+.... .....||.|+..+
T Consensus 13 ~~~~~C~IC~~~~~~-~~~~CgH~fc~~Ci~~~~--~~~~~CP~Cr~~~ 58 (70)
T 2ecn_A 13 TDEEECCICMDGRAD-LILPCAHSFCQKCIDKWS--DRHRNCPICRLQM 58 (70)
T ss_dssp CCCCCCSSSCCSCCS-EEETTTEEECHHHHHHSS--CCCSSCHHHHHCT
T ss_pred CCCCCCeeCCcCccC-cccCCCCcccHHHHHHHH--HCcCcCCCcCCcc
Confidence 345789999976432 334688889999985211 1467899998643
No 151
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=25.82 E-value=26 Score=31.17 Aligned_cols=49 Identities=18% Similarity=0.391 Sum_probs=32.3
Q ss_pred cccccccccccCCceEEcCCCCCccccCCCCCCCCCCCCccccccccccc
Q 002944 714 ENDDLCGICMDGGDLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYCMNTFQ 763 (863)
Q Consensus 714 endd~C~VC~dgGdLL~CD~CpraFH~~CL~L~~vP~G~W~C~~C~~~~~ 763 (863)
..+..|.+|.+.-.-..--.|...||..|+.-.. ..+...||.|+..+.
T Consensus 13 ~~~~~C~iC~~~~~~p~~~~CgH~fC~~Ci~~~~-~~~~~~CP~Cr~~~~ 61 (115)
T 3l11_A 13 LSECQCGICMEILVEPVTLPCNHTLCKPCFQSTV-EKASLCCPFCRRRVS 61 (115)
T ss_dssp HHHHBCTTTCSBCSSCEECTTSCEECHHHHCCCC-CTTTSBCTTTCCBCH
T ss_pred CCCCCCccCCcccCceeEcCCCCHHhHHHHHHHH-hHCcCCCCCCCcccC
Confidence 3456799998653211112799999999985322 234688999998654
No 152
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=24.26 E-value=13 Score=29.22 Aligned_cols=45 Identities=29% Similarity=0.626 Sum_probs=29.5
Q ss_pred cccccccccC-------CceEEcCCCCCccccCCCCCCCCCCCCcccccccccc
Q 002944 716 DDLCGICMDG-------GDLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYCMNTF 762 (863)
Q Consensus 716 dd~C~VC~dg-------GdLL~CD~CpraFH~~CL~L~~vP~G~W~C~~C~~~~ 762 (863)
+..|.+|.+. ++.+..-.|...||..|+.... .....||.|+...
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~--~~~~~CP~Cr~~~ 54 (64)
T 2xeu_A 3 MVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSL--KNANTCPTCRKKI 54 (64)
T ss_dssp CCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHH--HHCSBCTTTCCBC
T ss_pred CCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHH--HcCCCCCCCCccC
Confidence 4568888863 2344556899999999995110 0134799998754
No 153
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=22.89 E-value=48 Score=25.19 Aligned_cols=33 Identities=24% Similarity=0.511 Sum_probs=22.5
Q ss_pred CccccCCCCCcCCCCCCCCceEeccccccccccccccc
Q 002944 805 GGCVLCRGRDFCKSRFGRRTVILCDQCEREYHVGCLKD 842 (863)
Q Consensus 805 ~~C~ICkk~dfsks~f~~gtII~CDqCeraYHV~CLr~ 842 (863)
..|.||...-. .....+....|...||..|+..
T Consensus 6 ~~C~IC~~~~~-----~~~~~~~~~~CgH~fc~~Ci~~ 38 (55)
T 2ecm_A 6 SGCPICLEDIH-----TSRVVAHVLPCGHLLHRTCYEE 38 (55)
T ss_dssp CSCTTTCCCCC-----TTTSCEEECTTSCEEETTHHHH
T ss_pred CcCcccChhhc-----CCCcCeEecCCCCcccHHHHHH
Confidence 45999987421 1233455567999999999873
No 154
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=22.53 E-value=13 Score=32.59 Aligned_cols=48 Identities=21% Similarity=0.358 Sum_probs=30.2
Q ss_pred cccccccccCCceEEcCCCCCccccCCCCC-CCCCCCCccccccccccc
Q 002944 716 DDLCGICMDGGDLLCCDSCPRAFHIDCVSL-PGIPSGTWHCRYCMNTFQ 763 (863)
Q Consensus 716 dd~C~VC~dgGdLL~CD~CpraFH~~CL~L-~~vP~G~W~C~~C~~~~~ 763 (863)
...|.+|.+.-.-..--.|...||..|+.- .....+...||.|+....
T Consensus 21 ~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~ 69 (112)
T 1jm7_A 21 ILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDIT 69 (112)
T ss_dssp HTSCSSSCCCCSSCCBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCC
T ss_pred CCCCcccChhhcCeEECCCCCHHHHHHHHHHHHhCCCCCCCcCCCCcCC
Confidence 357999987432111136999999999841 112235678999997544
No 155
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.28 E-value=13 Score=31.03 Aligned_cols=49 Identities=16% Similarity=0.290 Sum_probs=31.2
Q ss_pred cccccccccccCCce----EEcCCCCCccccCCCCCC-CCCCCCcccccccccc
Q 002944 714 ENDDLCGICMDGGDL----LCCDSCPRAFHIDCVSLP-GIPSGTWHCRYCMNTF 762 (863)
Q Consensus 714 endd~C~VC~dgGdL----L~CD~CpraFH~~CL~L~-~vP~G~W~C~~C~~~~ 762 (863)
.....|.+|.+.-.. ..--.|...||..|+.-. ....+...||.|+...
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~ 66 (88)
T 2ct2_A 13 REVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKIT 66 (88)
T ss_dssp CSCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHCSSCBCCTTTCCCB
T ss_pred cCCCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcCCCCcCCCCCCCcc
Confidence 345679999975221 222369999999998411 1112457899999754
No 156
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=22.26 E-value=55 Score=26.84 Aligned_cols=33 Identities=15% Similarity=0.418 Sum_probs=20.9
Q ss_pred cCccccCCCCCcCCCCCCCCceEeccccccccccccccc
Q 002944 804 LGGCVLCRGRDFCKSRFGRRTVILCDQCEREYHVGCLKD 842 (863)
Q Consensus 804 ~~~C~ICkk~dfsks~f~~gtII~CDqCeraYHV~CLr~ 842 (863)
...|.||... +.....+.--.|...||..|+..
T Consensus 15 ~~~C~IC~~~------~~~~~~~~~~~C~H~fc~~Ci~~ 47 (78)
T 2ect_A 15 GLECPVCKED------YALGESVRQLPCNHLFHDSCIVP 47 (78)
T ss_dssp SCCCTTTTSC------CCTTSCEEECTTSCEEETTTTHH
T ss_pred CCCCeeCCcc------ccCCCCEEEeCCCCeecHHHHHH
Confidence 3459999873 22222222235899999999873
No 157
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=22.21 E-value=27 Score=28.69 Aligned_cols=49 Identities=20% Similarity=0.564 Sum_probs=31.9
Q ss_pred cccccccccccCC-ceEEcCCCCCccccCCCCC--C--CCCCCCccccccccccc
Q 002944 714 ENDDLCGICMDGG-DLLCCDSCPRAFHIDCVSL--P--GIPSGTWHCRYCMNTFQ 763 (863)
Q Consensus 714 endd~C~VC~dgG-dLL~CD~CpraFH~~CL~L--~--~vP~G~W~C~~C~~~~~ 763 (863)
..+..|.+|.+.- +-+. -.|...||..|+.. . ....+...||.|+....
T Consensus 17 ~~~~~C~IC~~~~~~p~~-~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~ 70 (85)
T 2ecw_A 17 KEEVTCPICLELLKEPVS-ADCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYP 70 (85)
T ss_dssp CTTTSCTTTCSCCSSCEE-CTTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCC
T ss_pred ccCCCCcCCChhhCccee-CCCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcCC
Confidence 3456799998753 2222 25898999999841 1 12235789999997543
No 158
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.67 E-value=30 Score=29.30 Aligned_cols=18 Identities=22% Similarity=0.733 Sum_probs=13.7
Q ss_pred eEeccccccccccccccc
Q 002944 825 VILCDQCEREYHVGCLKD 842 (863)
Q Consensus 825 II~CDqCeraYHV~CLr~ 842 (863)
++.-..|...||..|+..
T Consensus 42 ~~~~~~C~H~FH~~Ci~~ 59 (81)
T 2ecl_A 42 VVVWGECNHSFHNCCMSL 59 (81)
T ss_dssp CEEEETTSCEEEHHHHHH
T ss_pred EEEeCCCCCccChHHHHH
Confidence 344447999999999873
No 159
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.56 E-value=26 Score=28.66 Aligned_cols=48 Identities=21% Similarity=0.280 Sum_probs=31.6
Q ss_pred ccccccccccccCC-ceEEcCCCCCccccCCCCCCCCCCCCcccccccccc
Q 002944 713 KENDDLCGICMDGG-DLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYCMNTF 762 (863)
Q Consensus 713 ~endd~C~VC~dgG-dLL~CD~CpraFH~~CL~L~~vP~G~W~C~~C~~~~ 762 (863)
......|.+|.+.- +-+.-..|...||..|+.-.. .....||.|+..+
T Consensus 12 ~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~--~~~~~CP~Cr~~~ 60 (72)
T 2djb_A 12 LTPYILCSICKGYLIDATTITECLHTFCKSCIVRHF--YYSNRCPKCNIVV 60 (72)
T ss_dssp CCGGGSCTTTSSCCSSCEECSSSCCEECHHHHHHHH--HHCSSCTTTCCCC
T ss_pred cCCCCCCCCCChHHHCcCEECCCCCHHHHHHHHHHH--HcCCcCCCcCccc
Confidence 34567899998754 344445799999999984110 0134699998754
No 160
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=21.49 E-value=9.9 Score=33.50 Aligned_cols=49 Identities=22% Similarity=0.390 Sum_probs=34.1
Q ss_pred ccccccccccCC-ceEEcCCCCCccccCCCCCCCCCCCCcccccccccccc
Q 002944 715 NDDLCGICMDGG-DLLCCDSCPRAFHIDCVSLPGIPSGTWHCRYCMNTFQK 764 (863)
Q Consensus 715 ndd~C~VC~dgG-dLL~CD~CpraFH~~CL~L~~vP~G~W~C~~C~~~~~k 764 (863)
.+..|.+|.+.= +-+.|-.|...||..|+...-. .....||.|+..+..
T Consensus 21 ~~~~C~IC~~~~~~p~~~~~CgH~FC~~Ci~~~~~-~~~~~CP~Cr~~~~~ 70 (100)
T 3lrq_A 21 EVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLT-EQRAQCPHCRAPLQL 70 (100)
T ss_dssp HHTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHH-HTCSBCTTTCCBCCG
T ss_pred CCCCCccCCccccCccccCCCCChhhHHHHHHHHH-HCcCCCCCCCCcCCH
Confidence 346799999753 5667789999999999941100 012689999986544
No 161
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.39 E-value=50 Score=28.48 Aligned_cols=34 Identities=21% Similarity=0.435 Sum_probs=19.5
Q ss_pred cCccccCCCCCcCCCCCCCCceE-ecc--ccccccccccccc
Q 002944 804 LGGCVLCRGRDFCKSRFGRRTVI-LCD--QCEREYHVGCLKD 842 (863)
Q Consensus 804 ~~~C~ICkk~dfsks~f~~gtII-~CD--qCeraYHV~CLr~ 842 (863)
...|.||.... . ....++ .|. ....+||..||..
T Consensus 15 ~~~C~IC~~~~-~----~~~~l~~pC~C~Gs~h~fH~~Cl~~ 51 (80)
T 2d8s_A 15 QDICRICHCEG-D----DESPLITPCHCTGSLHFVHQACLQQ 51 (80)
T ss_dssp SCCCSSSCCCC-C----SSSCEECSSSCCSSSCCEETTHHHH
T ss_pred CCCCeEcCccc-c----CCCeeEeccccCCcCCeeCHHHHHH
Confidence 34599998632 1 122333 221 2239999999973
No 162
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=20.55 E-value=13 Score=34.47 Aligned_cols=44 Identities=18% Similarity=0.327 Sum_probs=28.6
Q ss_pred cccccccccCCc-eEEcCCCCCccccCCCCCCCCCCCCcccccccccc
Q 002944 716 DDLCGICMDGGD-LLCCDSCPRAFHIDCVSLPGIPSGTWHCRYCMNTF 762 (863)
Q Consensus 716 dd~C~VC~dgGd-LL~CD~CpraFH~~CL~L~~vP~G~W~C~~C~~~~ 762 (863)
+..|.+|.+.-. .+. -.|...||..|+.-.. ...-.||.|+..+
T Consensus 53 ~~~C~iC~~~~~~~~~-~~CgH~fc~~Ci~~~~--~~~~~CP~Cr~~~ 97 (138)
T 4ayc_A 53 ELQCIICSEYFIEAVT-LNCAHSFCSYCINEWM--KRKIECPICRKDI 97 (138)
T ss_dssp HSBCTTTCSBCSSEEE-ETTSCEEEHHHHHHHT--TTCSBCTTTCCBC
T ss_pred cCCCcccCcccCCceE-CCCCCCccHHHHHHHH--HcCCcCCCCCCcC
Confidence 456999997542 222 2588999999984110 1234699999754
Done!