Your job contains 1 sequence.
>002950
MGESAVCLEVPADGEMDVECSSRTESKQDRELLTDNVESDSFPNGKHAKEEALNDDIKSE
VSNPVVSPKEFTSSLQDITSQETKLVTESCNQVLSTTSTGNLSSEETLSDGDERTESSYA
ETSRTDNNSGDVSKSHVVLEIPKHVSSSSGIRKITFKFSKRKEDYVAPLAYEEGRNYTLY
DDLGSSGANDGVLCARNMEIKMSKKVVPNEYPTNVKKLLSTGILDGACVKYISTSRERQL
DGIVNGGGYLCGCPLCNFSKVVSAHEFEQHAGAKTRHPNNHIYLENGKPIYSIIQELKTA
PLGILEEVVKKVAGSSFNEGSFRVWKASHHLRKGLVEHDEKHNMKLPSLPHSIISCSSLA
LEESISPTSCSFVQDTGREQTHMKEMLEERKRGVKRPFMHQKRTAEGGTKKRDNDLHRLL
FLPNGLPDGERLTYIVKGQRLRFGCKQGNGIVCDCCNKEISPSQFEAHAGMAARRQPYRH
IYTSNGMTLHDIAISLAMGQRRTTGGSDDMCHVCGDGENLLLCNGCPLAFHAACLDPLLI
PESGWRCPNCRQGHSSSMSRSVDLKGGLEAPGAEVGGCVICRLSPSENFDIRLCRSHDFS
AATFDDRTVIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFCCDDCNRIHAALQDFVSNR
AQTIPASSLSTINRKHIEKGILFDGTMNDVQWQMLKKAQCFEEKEKSLLSSATAIFRECF
DPIIAECGRDLIPVMVYGRNISGQEFGGMYSVILTVKSVVVSAGLLRIFGREVAELPLVA
TCREYQGKGCFQALFSCIERLLCSLNVENLVLPAAEKAESIWTKKFGFRKMSRERLLKYQ
RDFQLTIFKGTSMLEKKVQCLPE
The BLAST search returned 8 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 002950
(863 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2040550 - symbol:AT2G36720 "AT2G36720" species... 1062 3.1e-125 2
TAIR|locus:2168088 - symbol:AT5G59830 "AT5G59830" species... 413 6.0e-42 2
TAIR|locus:2173179 - symbol:AT5G13660 "AT5G13660" species... 419 2.6e-38 1
TAIR|locus:2201021 - symbol:AT1G05380 "AT1G05380" species... 262 3.1e-37 2
TAIR|locus:2178828 - symbol:AT5G58610 "AT5G58610" species... 205 5.0e-30 3
TAIR|locus:2147391 - symbol:AT5G36740 species:3702 "Arabi... 205 4.8e-27 2
TAIR|locus:2086395 - symbol:ROS4 "AT3G14980" species:3702... 296 8.6e-26 2
TAIR|locus:2163961 - symbol:AT5G63900 "AT5G63900" species... 225 1.8e-23 3
TAIR|locus:2832118 - symbol:AT5G36670 species:3702 "Arabi... 205 4.3e-19 2
ZFIN|ZDB-GENE-041111-187 - symbol:chd4a "chromodomain hel... 178 3.2e-09 1
UNIPROTKB|E9PU01 - symbol:Chd4 "Protein Chd4" species:101... 187 4.1e-09 2
UNIPROTKB|F1N3F6 - symbol:CHD4 "Uncharacterized protein" ... 187 4.2e-09 2
UNIPROTKB|F1LM59 - symbol:Chd4 "Protein Chd4" species:101... 187 4.3e-09 2
UNIPROTKB|E2RHA0 - symbol:CHD4 "Uncharacterized protein" ... 187 5.2e-09 2
UNIPROTKB|F1SLR5 - symbol:CHD4 "Uncharacterized protein" ... 187 5.2e-09 2
MGI|MGI:1344380 - symbol:Chd4 "chromodomain helicase DNA ... 187 5.2e-09 2
UNIPROTKB|J9NW81 - symbol:CHD4 "Uncharacterized protein" ... 187 5.3e-09 2
UNIPROTKB|H7C2H0 - symbol:CHD3 "Chromodomain-helicase-DNA... 168 6.6e-09 1
UNIPROTKB|F5GWX5 - symbol:CHD4 "Chromodomain-helicase-DNA... 184 8.4e-09 2
UNIPROTKB|Q14839 - symbol:CHD4 "Chromodomain-helicase-DNA... 184 8.5e-09 2
UNIPROTKB|F1NH79 - symbol:CHD4 "Uncharacterized protein" ... 175 4.6e-08 2
UNIPROTKB|F1ST12 - symbol:CHD3 "Uncharacterized protein" ... 172 8.5e-08 2
UNIPROTKB|F1N544 - symbol:CHD3 "Uncharacterized protein" ... 169 8.6e-08 2
UNIPROTKB|F1NH78 - symbol:F1NH78 "Uncharacterized protein... 143 1.2e-07 2
UNIPROTKB|C9JFR1 - symbol:AIRE "Autoimmune regulator" spe... 147 1.7e-07 1
UNIPROTKB|I3LQA6 - symbol:AIRE "Uncharacterized protein" ... 157 1.7e-07 2
UNIPROTKB|Q12873 - symbol:CHD3 "Chromodomain-helicase-DNA... 168 2.2e-07 2
ZFIN|ZDB-GENE-030131-4532 - symbol:chd4b "chromodomain he... 170 4.3e-07 2
UNIPROTKB|F1NRM1 - symbol:F1NRM1 "Uncharacterized protein... 134 5.2e-07 4
CGD|CAL0003038 - symbol:orf19.6506 species:5476 "Candida ... 104 5.3e-07 3
ZFIN|ZDB-GENE-071008-4 - symbol:aire "autoimmune regulato... 141 1.3e-06 2
UNIPROTKB|C9JL37 - symbol:AIRE "Autoimmune regulator" spe... 147 1.6e-06 2
UNIPROTKB|F1SSZ2 - symbol:CHD5 "Uncharacterized protein" ... 152 1.7e-06 1
UNIPROTKB|E2R1M3 - symbol:CHD5 "Uncharacterized protein" ... 152 1.8e-06 1
RGD|1307955 - symbol:Whsc1 "Wolf-Hirschhorn syndrome cand... 126 2.5e-06 3
MGI|MGI:1276574 - symbol:Whsc1 "Wolf-Hirschhorn syndrome ... 127 2.6e-06 3
RGD|1583154 - symbol:LOC686349 "similar to Wolf-Hirschhor... 126 2.7e-06 3
UNIPROTKB|E9PG89 - symbol:CHD3 "Chromodomain-helicase-DNA... 168 2.8e-06 3
RGD|1311139 - symbol:Aire "autoimmune regulator" species:... 153 3.3e-06 3
ZFIN|ZDB-GENE-091204-206 - symbol:si:dkey-21n12.3 "si:dke... 112 3.4e-06 4
UNIPROTKB|F1PPM4 - symbol:AIRE "Uncharacterized protein" ... 154 3.9e-06 4
UNIPROTKB|E1BIC4 - symbol:AIRE "Uncharacterized protein" ... 154 5.6e-06 3
RGD|1582725 - symbol:Chd5 "chromodomain helicase DNA bind... 152 6.2e-06 2
FB|FBgn0262519 - symbol:Mi-2 species:7227 "Drosophila mel... 147 6.9e-06 1
UNIPROTKB|H0Y9U6 - symbol:WHSC1 "Histone-lysine N-methylt... 135 7.5e-06 1
UNIPROTKB|F1N9E9 - symbol:Gga.18314 "Uncharacterized prot... 128 1.0e-05 3
UNIPROTKB|F1LPP8 - symbol:Chd3 "Protein Chd3" species:101... 143 1.1e-05 2
ZFIN|ZDB-GENE-030131-2581 - symbol:whsc1 "Wolf-Hirschhorn... 121 1.1e-05 5
UNIPROTKB|F1N972 - symbol:Gga.18314 "Uncharacterized prot... 128 1.2e-05 3
UNIPROTKB|F2Z2R5 - symbol:CHD5 "Chromodomain-helicase-DNA... 152 1.5e-05 2
MGI|MGI:1338803 - symbol:Aire "autoimmune regulator (auto... 147 1.8e-05 4
ZFIN|ZDB-GENE-121031-4 - symbol:chd3 "chromodomain helica... 131 1.8e-05 2
UNIPROTKB|O43918 - symbol:AIRE "Autoimmune regulator" spe... 147 2.2e-05 3
UNIPROTKB|J9NRN3 - symbol:CHD5 "Uncharacterized protein" ... 152 2.2e-05 2
FB|FBgn0033636 - symbol:tou "toutatis" species:7227 "Dros... 114 2.3e-05 3
ZFIN|ZDB-GENE-080519-2 - symbol:nsd1b "nuclear receptor b... 130 2.7e-05 3
UNIPROTKB|E1C765 - symbol:WHSC1 "Uncharacterized protein"... 115 2.9e-05 3
UNIPROTKB|F1RIM3 - symbol:CHD5 "Uncharacterized protein" ... 152 3.2e-05 2
FB|FBgn0029861 - symbol:CG3815 species:7227 "Drosophila m... 130 3.2e-05 2
UNIPROTKB|F1S4N3 - symbol:KDM5B "Uncharacterized protein"... 124 4.1e-05 2
UNIPROTKB|Q8TDI0 - symbol:CHD5 "Chromodomain-helicase-DNA... 152 4.1e-05 2
WB|WBGene00000482 - symbol:chd-3 species:6239 "Caenorhabd... 139 4.4e-05 1
UNIPROTKB|Q22516 - symbol:chd-3 "Chromodomain-helicase-DN... 139 4.4e-05 1
UNIPROTKB|O96028 - symbol:WHSC1 "Histone-lysine N-methylt... 122 5.5e-05 3
ZFIN|ZDB-GENE-091118-99 - symbol:si:ch211-244o18.1 "si:ch... 131 8.2e-05 1
UNIPROTKB|F1NMG7 - symbol:F1NMG7 "Uncharacterized protein... 140 9.0e-05 3
UNIPROTKB|B3KV94 - symbol:JARID1B "cDNA FLJ16281 fis, clo... 119 0.00010 2
RGD|1311923 - symbol:Chd3 "chromodomain helicase DNA bind... 143 0.00011 2
UNIPROTKB|J3QQU3 - symbol:PHF12 "PHD finger protein 12" s... 105 0.00012 1
UNIPROTKB|E2RTI2 - symbol:CHD3 "Uncharacterized protein" ... 141 0.00015 2
UNIPROTKB|Q9UGL1 - symbol:KDM5B "Lysine-specific demethyl... 119 0.00015 2
UNIPROTKB|J9NUG7 - symbol:WHSC1 "Uncharacterized protein"... 121 0.00016 3
UNIPROTKB|F1PK46 - symbol:WHSC1 "Uncharacterized protein"... 121 0.00017 3
UNIPROTKB|F1N7W5 - symbol:LOC788840 "Uncharacterized prot... 127 0.00017 1
UNIPROTKB|F1MUR2 - symbol:KDM5B "Uncharacterized protein"... 124 0.00017 2
FB|FBgn0023395 - symbol:Chd3 "Chd3" species:7227 "Drosoph... 130 0.00018 1
ASPGD|ASPL0000065953 - symbol:AN7300 species:162425 "Emer... 126 0.00019 2
UNIPROTKB|F1LXK8 - symbol:LOC100362634 "Protein LOC100362... 134 0.00021 1
ZFIN|ZDB-GENE-030131-3876 - symbol:phf12a "PHD finger pro... 118 0.00027 2
UNIPROTKB|D4AC30 - symbol:D4AC30 "Uncharacterized protein... 115 0.00029 2
WB|WBGene00004319 - symbol:rbr-2 species:6239 "Caenorhabd... 106 0.00031 2
UNIPROTKB|Q23541 - symbol:rbr-2 "Lysine-specific demethyl... 106 0.00031 2
UNIPROTKB|J9NSP5 - symbol:MLL2 "Uncharacterized protein" ... 135 0.00032 1
UNIPROTKB|F1SHC3 - symbol:MLL2 "Uncharacterized protein" ... 135 0.00036 1
ZFIN|ZDB-GENE-080519-3 - symbol:nsd1a "nuclear receptor b... 124 0.00037 3
UNIPROTKB|I3LTW9 - symbol:MLL2 "Uncharacterized protein" ... 135 0.00037 1
UNIPROTKB|G3MZF2 - symbol:MLL2 "Uncharacterized protein" ... 135 0.00039 1
UNIPROTKB|E1B9N8 - symbol:MLL2 "Uncharacterized protein" ... 135 0.00039 1
UNIPROTKB|O14686 - symbol:MLL2 "Histone-lysine N-methyltr... 135 0.00040 1
UNIPROTKB|E2RQ26 - symbol:MLL2 "Uncharacterized protein" ... 135 0.00040 1
UNIPROTKB|J9P0X8 - symbol:MLL2 "Uncharacterized protein" ... 135 0.00041 1
ZFIN|ZDB-GENE-040426-2039 - symbol:uhrf1 "ubiquitin-like,... 126 0.00041 1
MGI|MGI:1276545 - symbol:Nsd1 "nuclear receptor-binding S... 130 0.00045 3
UNIPROTKB|F1NW66 - symbol:Gga.49064 "Uncharacterized prot... 143 0.00046 2
UNIPROTKB|F1LPP7 - symbol:Chd3 "Protein Chd3" species:101... 143 0.00047 3
UNIPROTKB|Q8NEZ4 - symbol:MLL3 "Histone-lysine N-methyltr... 132 0.00049 2
UNIPROTKB|J9P5P6 - symbol:MLL3 "Uncharacterized protein" ... 133 0.00050 1
UNIPROTKB|F1M7Q0 - symbol:Chd3 "Protein Chd3" species:101... 143 0.00050 3
TAIR|locus:2040184 - symbol:PKL "PICKLE" species:3702 "Ar... 128 0.00050 1
UNIPROTKB|F1LM99 - symbol:F1LM99 "Uncharacterized protein... 115 0.00051 2
WARNING: Descriptions of 21 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2040550 [details] [associations]
symbol:AT2G36720 "AT2G36720" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009630 "gravitropism" evidence=RCA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016746 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 HSSP:Q14839 eggNOG:NOG145066 EMBL:AY093116
EMBL:BT008812 IPI:IPI00537974 RefSeq:NP_850270.1 UniGene:At.37517
ProteinModelPortal:Q8RWG0 SMR:Q8RWG0 PaxDb:Q8RWG0 PRIDE:Q8RWG0
EnsemblPlants:AT2G36720.1 GeneID:818244 KEGG:ath:AT2G36720
TAIR:At2g36720 HOGENOM:HOG000149118 InParanoid:Q8RWG0 OMA:DSCPRAF
PhylomeDB:Q8RWG0 ProtClustDB:CLSN2680077 Genevestigator:Q8RWG0
Uniprot:Q8RWG0
Length = 1007
Score = 1062 (378.9 bits), Expect = 3.1e-125, Sum P(2) = 3.1e-125
Identities = 211/458 (46%), Positives = 295/458 (64%)
Query: 411 KRDNDLHRLLFLPNGLPDGERLTYIVKGQRLRFGCKQGNGIVCDCCNKEISPSQFEAHAG 470
++D LH+L+F GLP+G L Y +GQ+L G K G GI C CC E+SPS FEAHAG
Sbjct: 518 RKDQGLHKLVFDRGGLPEGTELGYYARGQKLLGGYKMGAGIYCYCCKCEVSPSLFEAHAG 577
Query: 471 MAARRQPYRHIYTSNGMTLHDIAISLAMGQRRTTGGSDDMCHVCGDGENLLLCNGCPLAF 530
A+RR+PY +IYTSNG++LH+ A + + G++ + ++D+C +C DG NLLLC+ CP AF
Sbjct: 578 WASRRKPYFYIYTSNGVSLHEWATTFSHGRKYSANDNNDLCVICADGGNLLLCDSCPRAF 637
Query: 531 HAACLDPLLIPESGWRCPNCRQGHSSSMSRSVDLK----GGLEA--PGAEVGG-CV-ICR 582
H C+ IP W C C +S ++ ++ G LE P ++ G C+ + +
Sbjct: 638 HIECVSLPSIPRGNWHCKYCENKFTSEIAGEYNVNSSAVGQLEGVDPVDQLAGRCIRVVK 697
Query: 583 LSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFC 642
+E LC DF + F RT+I CDQCEKE+H+GCL + DLKE+PK WFC
Sbjct: 698 NMEAETNGCVLCSGSDFCRSGFGPRTIIICDQCEKEYHIGCLSSQNIVDLKELPKGNWFC 757
Query: 643 CDDCNRIHAALQDFVSNRAQTIPASSLSTINRKHIEKGILFDGTMNDVQWQMLKKAQCFE 702
DC RI++ LQ + A+ + SSL I K E+ ++ + D++W+++ +
Sbjct: 758 SMDCTRINSTLQKLLLGGAEKLSDSSLGIIQTKQ-ERNDVYSISDLDIRWRLIS-GKVTS 815
Query: 703 EKEKSLLSSATAIFRECFDPIIAEC-GRDLIPVMVYGRNISGQEFGGMYSVILTVKSVVV 761
+ + LLS A AIF +CFDPI+ G +LIP MVYG+ + GQ++GG+ +LTV + VV
Sbjct: 816 PESRMLLSQALAIFHDCFDPIVDPLSGSNLIPRMVYGKTMQGQDYGGICCAVLTVNATVV 875
Query: 762 SAGLLRIFGREVAELPLVATCREYQGKGCFQALFSCIERLLCSLNVENLVLPAAEKAESI 821
SAGLLR+FGREVAELPLVAT + KG FQ LFSCIE+LL SLNVE++V+PAAE+AE +
Sbjct: 876 SAGLLRVFGREVAELPLVATRMCSREKGYFQLLFSCIEKLLSSLNVESIVVPAAEEAEPL 935
Query: 822 WTKKFGFRKMSRERLLKYQRD-FQLTIFKGTSMLEKKV 858
W KFGFRK++ E+L KY + +Q+ FKG SML+K V
Sbjct: 936 WMNKFGFRKLAPEQLSKYIKICYQMVRFKGASMLQKPV 973
Score = 189 (71.6 bits), Expect = 3.1e-125, Sum P(2) = 3.1e-125
Identities = 54/204 (26%), Positives = 88/204 (43%)
Query: 121 ETSRTDNNSGDVSKSHVVLEIPKHVSSSSGIRKITFKFSKRKEDYVAPLAYEEGRNYTLY 180
E R + KS+ V E KH S + +K + + P E
Sbjct: 178 EVKRLGTKVRTMGKSYSVSEKKKHGSFKRTAQIYKSIVRMKKVNNLVP----ENVEVLAE 233
Query: 181 DDLGSSGANDGVLCARNMEIKMSKKVVPNEYPTNVKKLLSTGILDGACVKYISTSRERQ- 239
D G G ++ + ++ + K ++ P V+ L TG+LDG V Y+ T + +
Sbjct: 234 PDFGREGLDEQ---SHSVSLA-DKSILIRSRPETVRDLFETGLLDGLSVVYMGTVKSQAF 289
Query: 240 -LDGIVNGGGYLCGCPLCNFSKVVSAHEFEQHAGAKTRHPNNHIYLENGKPIYSIIQELK 298
L GI+ GG LC C C+++ V+S +FE HA + R + +I ENGK + ++ +
Sbjct: 290 PLRGIIRDGGILCSCSSCDWANVISTSKFEIHACKQYRRASQYICFENGKSLLDVLNISR 349
Query: 299 TAPLGILEEVVKKVAGSSFNEGSF 322
PL LE + + E F
Sbjct: 350 NTPLHALEATILDAVDYASKEKRF 373
Score = 47 (21.6 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 14/64 (21%), Positives = 22/64 (34%)
Query: 613 DQCEKEFHVGCLRKNGLCDLKEIPKDKWFCCDDCNRIHAALQDFVSNRAQT-IPASSLST 671
D KE C R G + + F C C+ + + + R T PA S
Sbjct: 365 DYASKEKRFTCKRCKGPFPFSSLGH-RGFLCKSCSEVETSQASLAATRTSTSAPACITSP 423
Query: 672 INRK 675
+ +
Sbjct: 424 VKSR 427
>TAIR|locus:2168088 [details] [associations]
symbol:AT5G59830 "AT5G59830" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0048573 "photoperiodism, flowering" evidence=RCA]
EMBL:CP002688 IPI:IPI00541231 RefSeq:NP_200791.2 RefSeq:NP_974964.1
UniGene:At.29202 UniGene:At.29203 EnsemblPlants:AT5G59830.1
EnsemblPlants:AT5G59830.2 GeneID:836104 KEGG:ath:AT5G59830
OMA:FQAATRE Uniprot:F4JXC7
Length = 425
Score = 413 (150.4 bits), Expect = 6.0e-42, Sum P(2) = 6.0e-42
Identities = 75/138 (54%), Positives = 99/138 (71%)
Query: 191 GVLCARNMEIKMSKKVVPNEYPTNVKKLLSTGILDGACVKYISTSRERQLDGIVNGGGYL 250
G L E K SKK +P+NV+ L+STG+LDG VKY+S SRE +L G++ G GYL
Sbjct: 270 GSLPKTKAEAKSSKKEASTSFPSNVRSLISTGMLDGVPVKYVSVSRE-ELRGVIKGSGYL 328
Query: 251 CGCPLCNFSKVVSAHEFEQHAGAKTRHPNNHIYLENGKPIYSIIQELKTAPLGILEEVVK 310
CGC C+F+KV++A+ FE+HAG KT+HPNNHIY ENGK IY I+QEL+ P IL +V++
Sbjct: 329 CGCQTCDFTKVLNAYAFERHAGCKTKHPNNHIYFENGKTIYQIVQELRNTPESILFDVIQ 388
Query: 311 KVAGSSFNEGSFRVWKAS 328
V GS N+ +FR+WK S
Sbjct: 389 TVFGSPINQKAFRIWKES 406
Score = 122 (48.0 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 43/148 (29%), Positives = 70/148 (47%)
Query: 361 LEESISPTSCSFVQDTGREQTHMKEMLEERKRGVKRPFMHQ--KRTAEGGTKKRDNDLH- 417
+++ I + Q+TG QT + E++ V +P + K AE + K++
Sbjct: 234 VQDPIGTLDIVYDQETGSSQTSSGVVSEQQ---VAKPSLGSLPKTKAEAKSSKKEASTSF 290
Query: 418 ----RLLFLPNGLPDGERLTYI-VKGQRLRFGCKQGNGIVCDC--CN--KEISPSQFEAH 468
R L + G+ DG + Y+ V + LR G +G+G +C C C+ K ++ FE H
Sbjct: 291 PSNVRSL-ISTGMLDGVPVKYVSVSREELR-GVIKGSGYLCGCQTCDFTKVLNAYAFERH 348
Query: 469 AGMAARRQPYRHIYTSNGMTLHDIAISL 496
AG + P HIY NG T++ I L
Sbjct: 349 AGCKTKH-PNNHIYFENGKTIYQIVQEL 375
Score = 66 (28.3 bits), Expect = 6.0e-42, Sum P(2) = 6.0e-42
Identities = 19/61 (31%), Positives = 32/61 (52%)
Query: 21 SSRTESKQDRELLTDNVESDSFPNGKHAKEEALNDDIKSEVSNPVVSPKEFTSSLQDITS 80
S+R +SK+ D+ S+ FPN K A ++ + KS V P+ E +S Q +++
Sbjct: 27 STRDDSKRPHPWFVDSSRSEMFPNKKQAVQDPVVGLGKSNVGLPLW---ESSSVFQSVSN 83
Query: 81 Q 81
Q
Sbjct: 84 Q 84
>TAIR|locus:2173179 [details] [associations]
symbol:AT5G13660 "AT5G13660" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002688 EMBL:AB006704 eggNOG:NOG12793
UniGene:At.32033 UniGene:At.66715 IPI:IPI00892118
RefSeq:NP_001119218.1 EnsemblPlants:AT5G13660.2 GeneID:831211
KEGG:ath:AT5G13660 TAIR:At5g13660 HOGENOM:HOG000064604 OMA:EQHANCK
PhylomeDB:B3H544 ProtClustDB:CLSN2702252 Genevestigator:B3H544
Uniprot:B3H544
Length = 537
Score = 419 (152.6 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 98/259 (37%), Positives = 139/259 (53%)
Query: 82 ETKLVTESCNQVLSTTSTGNLSSEET-LSDGDERTESSYAETSRTDNNSGDVSKSHVVLE 140
E+ E+ N + + S+ E T + ER S + R D+ S +S +
Sbjct: 268 ESNYHNENANALSAGQSSFTEGGEMTFMVSSQERAGQSNDQIRREDDRSETLSFG----D 323
Query: 141 IPKHVSSSSGIRKITFKFSKRKEDYVA---PLAYE--EGRNYTLYDDLGSSGANDGVLCA 195
K + S +R ++ + D PL E E ++ + +S D +L
Sbjct: 324 CQKETAMGSSVR-VSNNYENFSHDPAITKDPLHIEAEENMSFECRNPPYASPRVDTLLVP 382
Query: 196 RNMEIKMSKKVVPNEYPTNVKKLLSTGILDGACVKYISTSRE-RQLDGIVNGGGYLCGCP 254
+ + K +KK N +P+NVK LLSTGI DG VKY S SRE R L G++ G GYLCGC
Sbjct: 383 KIKDTKTAKKGSTNTFPSNVKSLLSTGIFDGVTVKYYSWSREQRNLKGMIKGTGYLCGCG 442
Query: 255 LCNFSKVVSAHEFEQHAGAKTRHPNNHIYLENGKPIYSIIQELKTAPLGILEEVVKKVAG 314
C +KV++A+EFEQHA KT+HPNNHIY ENGK IY ++QELK P L + ++ V G
Sbjct: 443 NCKLNKVLNAYEFEQHANCKTKHPNNHIYFENGKTIYGVVQELKNTPQEKLFDAIQNVTG 502
Query: 315 SSFNEGSFRVWKASHHLRK 333
S N +F WKAS+H+ +
Sbjct: 503 SDINHKNFNTWKASYHVAR 521
>TAIR|locus:2201021 [details] [associations]
symbol:AT1G05380 "AT1G05380" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IC;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00249 EMBL:CP002684
GO:GO:0046872 GO:GO:0008270 Gene3D:3.40.630.30 InterPro:IPR016181
SUPFAM:SSF55729 GO:GO:0016746 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 EMBL:AC005106 HSSP:Q14839
IPI:IPI00532257 RefSeq:NP_001117233.1 RefSeq:NP_563736.3
UniGene:At.15326 ProteinModelPortal:Q9ZW00 SMR:Q9ZW00 PRIDE:Q9ZW00
EnsemblPlants:AT1G05380.1 EnsemblPlants:AT1G05380.2 GeneID:837039
KEGG:ath:AT1G05380 TAIR:At1g05380 InParanoid:Q9ZW00 OMA:RIRSSIK
PhylomeDB:Q9ZW00 ProtClustDB:CLSN2699134 Genevestigator:Q9ZW00
Uniprot:Q9ZW00
Length = 1138
Score = 262 (97.3 bits), Expect = 3.1e-37, Sum P(2) = 3.1e-37
Identities = 78/252 (30%), Positives = 115/252 (45%)
Query: 608 TVIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFCCDDCNRIHAALQDFVSNRAQTIPAS 667
+++ C CE+ +H CL ++ FC C + LQ ++ + +
Sbjct: 687 SLLSCGMCERRYHQLCLNDEAH-KVQSFGSASSFCGPKCLELFEKLQKYLGVKTEIEGGY 745
Query: 668 SLSTINRKHIEKGILFDGTMNDVQWQMLKKAQCFEEKEKSLLSSATAIFRECFDPII-AE 726
S S I+R D T +D QM AQ E K L+ AI ECF PI+
Sbjct: 746 SWSLIHR--------VD-TDSDTNSQM--SAQRIENNSK--LAVGLAIMDECFLPIVDRR 792
Query: 727 CGRDLIPVMVY--GRNISGQEFGGMYSVILTVKSVVVSAGLLRIFGREVAELPLVATCRE 784
G DLI ++Y G N + + G Y+ IL ++SA LR G ++AE+P + T
Sbjct: 793 SGVDLIRNVLYNCGSNFNRINYTGFYTAILERGDEIISAASLRFHGMQLAEMPFIGTRHI 852
Query: 785 YQGKGCFQALFSCIERLLCSLNVENLVLPAAEKAESIWTKKFGFRKMSRERLLKYQRDFQ 844
Y+ +G + LF IE + SL VE LV+PA WT FGF + + + K R
Sbjct: 853 YRRQGMCRRLFDAIESAMRSLKVEKLVIPAIPDFLHAWTGNFGFTPLD-DSVRKEMRSLN 911
Query: 845 LTIFKGTSMLEK 856
+F G ML+K
Sbjct: 912 TLVFPGIDMLQK 923
Score = 231 (86.4 bits), Expect = 3.1e-37, Sum P(2) = 3.1e-37
Identities = 46/113 (40%), Positives = 66/113 (58%)
Query: 450 GIVCDCCNKEISPSQFEAHAGMAARRQPYRHIYTSNGMTLHDI----------AISLAMG 499
GI CDCC+K ++ S+FE HAG + QP+++IY +G +L A +LA+
Sbjct: 556 GIHCDCCSKILTVSRFEIHAGSKSC-QPFQNIYLESGASLLQCQVRAWNMQKDATNLALH 614
Query: 500 QRRTTGG--SDDMCHVCGDGENLLLCNGCPLAFHAACLDPLLIPESGWRCPNC 550
Q T G +DD C +CGDG +L+ C+GCP +H CL ++P W CPNC
Sbjct: 615 QVDTDGDDPNDDACGICGDGGDLICCDGCPSTYHQNCLGMQVLPSGDWHCPNC 667
Score = 91 (37.1 bits), Expect = 4.7e-22, Sum P(3) = 4.7e-22
Identities = 24/72 (33%), Positives = 40/72 (55%)
Query: 218 LLSTGILD-GACVKYISTSRER-QLDGIVNGGGYLCGCPLCNFSKVVSAHEFEQHAGAKT 275
L+ +G++ V+Y+ + L+G + G C C C SK+++ FE HAG+K+
Sbjct: 524 LIESGVVQLRQKVQYMRRRGAKVMLEGWITREGIHCDC--C--SKILTVSRFEIHAGSKS 579
Query: 276 RHPNNHIYLENG 287
P +IYLE+G
Sbjct: 580 CQPFQNIYLESG 591
Score = 42 (19.8 bits), Expect = 4.7e-22, Sum P(3) = 4.7e-22
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 516 DGE--NLLLCNGCPLAFHAACLD 536
DG +LL C C +H CL+
Sbjct: 682 DGNFISLLSCGMCERRYHQLCLN 704
>TAIR|locus:2178828 [details] [associations]
symbol:AT5G58610 "AT5G58610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0042991
"transcription factor import into nucleus" evidence=RCA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 INTERPRO:IPR008395 EMBL:CP002688 GO:GO:0046872
GO:GO:0008270 Gene3D:3.40.630.30 InterPro:IPR016181 SUPFAM:SSF55729
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Pfam:PF05641 InterPro:IPR014002
SMART:SM00743 IPI:IPI00519073 RefSeq:NP_200669.1 UniGene:At.55614
ProteinModelPortal:F4KGA3 SMR:F4KGA3 EnsemblPlants:AT5G58610.1
GeneID:835975 KEGG:ath:AT5G58610 OMA:RITQDWN Uniprot:F4KGA3
Length = 1065
Score = 205 (77.2 bits), Expect = 5.0e-30, Sum P(3) = 5.0e-30
Identities = 50/152 (32%), Positives = 80/152 (52%)
Query: 708 LLSSATAIFRECFDPIIA-ECGRDLIPVMVYGR--NISGQEFGGMYSVILTVKSVVVSAG 764
+LS A + E F+P+ GRDL +++ R F G Y+V+L + +VS
Sbjct: 821 ILSVALDVMHELFEPVKRPHGGRDLAEDVIFSRWSKFKRLNFSGFYTVLLERNNELVSVA 880
Query: 765 LLRIFGREVAELPLVATCREYQGKGCFQALFSCIERLLCSLNVENLVLPAAEKAESIWTK 824
+RI G++VAE+P + T +++ +G + L + +E++L L VE LVLPA + W
Sbjct: 881 TVRILGKKVAEMPFIGTRFQHRQRGMCRVLINELEKVLIDLGVERLVLPAVPCVLNTWIN 940
Query: 825 KFGFRKMSRERLLKYQRDFQLTIFKGTSMLEK 856
FGF KM+ + + F L F T + EK
Sbjct: 941 SFGFTKMTISERKNFLK-FTLLEFGRTILCEK 971
Score = 155 (59.6 bits), Expect = 5.0e-30, Sum P(3) = 5.0e-30
Identities = 35/112 (31%), Positives = 53/112 (47%)
Query: 450 GIVCDCCNKEISPSQFEAHAGMAARRQPYRHIYTSNGMTLHDIAISLAMGQRRTT----- 504
GI C CC + + + FE HA A +I+ +G +L + + +++
Sbjct: 626 GIKCSCCRRVFTINGFEVHAN-GASCSGAANIFLDDGRSLLECQVEAYKKRKKAQPPDML 684
Query: 505 ------GGSDDMCHVCGDGENLLLCNGCPLAFHAACLDPLLIPESGWRCPNC 550
G +D C VC G L+LC+GCP AFHA CL +P+ W C +C
Sbjct: 685 KMKLRQGENDVFCSVCHYGGKLILCDGCPSAFHANCLGLEDVPDGDWFCQSC 736
Score = 114 (45.2 bits), Expect = 5.0e-30, Sum P(3) = 5.0e-30
Identities = 20/38 (52%), Positives = 25/38 (65%)
Query: 610 IYCDQCEKEFHVGCLRKNGLCD-LKEIPKDKWFCCDDC 646
I C QCE ++H CLR +G CD L +I +KWFC DC
Sbjct: 759 ISCKQCELKYHPSCLRYDGACDSLDKILGEKWFCSKDC 796
Score = 51 (23.0 bits), Expect = 2.7e-19, Sum P(3) = 2.7e-19
Identities = 48/253 (18%), Positives = 100/253 (39%)
Query: 58 KSEVSNPVVSPKEFTSSLQDITSQETK---LVTESCNQVLSTTSTGNLSSEETLSDGDER 114
KS + + +P +S Q ++QE + L + N+ ++ LS++ L +
Sbjct: 418 KSLTTPGMANPPSLSSENQTYSTQEMRSIVLALPAFNRSVALGEGLKLSTDTLLEYETQG 477
Query: 115 TESSYAETSRT--DNNSGDVSKSHVVLEI-PKHVSSSSGIR-KITFKFSKRKEDYVAPL- 169
E + SR + K + + I PK + +R K K + +K++ + L
Sbjct: 478 NEEVFTRESRNFCPKKAFPGQKETLRVRIEPKTKAQGIILRLKSKRKQTPKKDEVIVGLQ 537
Query: 170 ----AYEEGRNYTLYDDLGSSGANDG---VLCARNMEIKMSKKVVPNEYPTNVKK-LLST 221
+ G D+ + + G VL +R ++ + P N+ L+
Sbjct: 538 NVNRSMRRGHTSKKLMDIKNRVTSRGKTRVLRSRKRAQRVITPISRKHSPRNILSWLMDN 597
Query: 222 GIL----DGACVKYISTSRERQLDGIVNGGGYLCGCPLCNFSKVVSAHEFEQHAGAKTRH 277
++ + C T+ ++ G + G C C C +V + + FE HA +
Sbjct: 598 NVVLPRENIRCCNQKDTTVRKE--GKLTREGIKCSC--CR--RVFTINGFEVHANGASCS 651
Query: 278 PNNHIYLENGKPI 290
+I+L++G+ +
Sbjct: 652 GAANIFLDDGRSL 664
Score = 47 (21.6 bits), Expect = 1.9e-12, Sum P(3) = 1.9e-12
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 518 ENLLLCNGCPLAFHAACL 535
E + C C L +H +CL
Sbjct: 756 EKFISCKQCELKYHPSCL 773
>TAIR|locus:2147391 [details] [associations]
symbol:AT5G36740 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
SMART:SM00384 EMBL:CP002688 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 InterPro:IPR020478 PRINTS:PR00929 Gene3D:3.40.630.30
InterPro:IPR016181 SUPFAM:SSF55729 GO:GO:0016746 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 UniGene:At.55161 IPI:IPI00544011
RefSeq:NP_568540.1 UniGene:At.55166 ProteinModelPortal:F4K4H9
SMR:F4K4H9 EnsemblPlants:AT5G36740.1 GeneID:833643
KEGG:ath:AT5G36740 OMA:IDTWTSG Uniprot:F4K4H9
Length = 1179
Score = 205 (77.2 bits), Expect = 4.8e-27, Sum P(2) = 4.8e-27
Identities = 44/113 (38%), Positives = 58/113 (51%)
Query: 450 GIVCDCCNKEISPSQFEAHAGMAARRQPYRHIYTSNGMTL----HDI----AISLAMGQR 501
GI C+CC++ S FE HAG R QP++ +Y G +L H+ + S G
Sbjct: 581 GIRCNCCDEVFSVLDFEVHAG-GNRNQPFKSLYLEGGNSLLQCLHESMNKQSESQLKGYH 639
Query: 502 RTTGGS----DDMCHVCGDGENLLLCNGCPLAFHAACLDPLLIPESGWRCPNC 550
GS DD C +CGDG +L+ C+GCP FH +CLD P W C NC
Sbjct: 640 FVDFGSGDPNDDTCGICGDGGDLICCDGCPSTFHQSCLDIKKFPSGAWYCYNC 692
Score = 193 (73.0 bits), Expect = 4.8e-27, Sum P(2) = 4.8e-27
Identities = 65/257 (25%), Positives = 113/257 (43%)
Query: 612 CDQ-CEKEF------HVGCLRKNGLCDLKEIPKDKWFCCDDCNRIHAALQDFVSNRAQTI 664
C++ C K + H C+ ++G E D FC C + LQ F+ +
Sbjct: 719 CEEKCSKHYPHTLADHQACINQDGTVP-GERSTDS-FCGKYCQELFEELQLFIGVKHPLP 776
Query: 665 PASSLSTINRKHIEKGILFDGTMNDVQWQMLKKAQCFEEKEKSLLSSATAIFRECFDPII 724
S S + R + + D D+ ++ A+ ++ A ++ ECF P++
Sbjct: 777 EGFSWSFLRRFELPSEVA-DC---DISEKIAYNAK---------MAVAFSVMDECFSPLV 823
Query: 725 AE-CGRDLIPVMVY--GRNISGQEFGGMYSVILTVKSVVVSAGLLRIFGREVAELPLVAT 781
G +L+ +VY G N +F + +L +++ +RI G ++AE+P + T
Sbjct: 824 DHRSGVNLLQNIVYNFGSNFHRLDFSSFLTAVLERGDEIIAVASIRIHGNQLAEMPFIGT 883
Query: 782 CREYQGKGCFQALFSCIERLLCSLNVENLVLPAAEKAESIWTKKFGFRKMSRERLLKYQR 841
Y+ +G + L IE L SL V+ LV+PA + WT FGF ++ K +
Sbjct: 884 RYMYRRQGMCRRLMDGIESALGSLKVDKLVIPAVPELIDTWTSGFGFAPVNDSEK-KTIK 942
Query: 842 DFQLTIFKGTSMLEKKV 858
+ L +F G ML K +
Sbjct: 943 NLNLLVFPGVDMLGKSL 959
Score = 90 (36.7 bits), Expect = 5.2e-15, Sum P(2) = 5.2e-15
Identities = 20/57 (35%), Positives = 28/57 (49%)
Query: 240 LDGIVNGGGYLCGCPLCNFSKVVSAHEFEQHAGAKTRHPNNHIYLENGKPIYSIIQE 296
L+GI+ G C C C+ +V S +FE HAG P +YLE G + + E
Sbjct: 573 LEGIITKEGIRCNC--CD--EVFSVLDFEVHAGGNRNQPFKSLYLEGGNSLLQCLHE 625
>TAIR|locus:2086395 [details] [associations]
symbol:ROS4 "AT3G14980" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0007267 "cell-cell signaling"
evidence=RCA] [GO:0009616 "virus induced gene silencing"
evidence=RCA] [GO:0010267 "production of ta-siRNAs involved in RNA
interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0004402
"histone acetyltransferase activity" evidence=IDA] [GO:0010385
"double-stranded methylated DNA binding" evidence=IPI] [GO:0042393
"histone binding" evidence=IDA] [GO:0043971 "histone H3-K18
acetylation" evidence=IDA] [GO:0043972 "histone H3-K23 acetylation"
evidence=IDA] [GO:0044030 "regulation of DNA methylation"
evidence=IMP] [GO:0044154 "histone H3-K14 acetylation"
evidence=IDA] [GO:0080188 "RNA-directed DNA methylation"
evidence=IMP] InterPro:IPR001841 InterPro:IPR000182
InterPro:IPR001739 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS51186 SMART:SM00184
SMART:SM00249 GO:GO:0009506 GO:GO:0005634 EMBL:CP002686
GO:GO:0046872 GO:GO:0008270 Gene3D:3.40.630.30 InterPro:IPR016181
SUPFAM:SSF55729 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0042393 Gene3D:3.30.890.10
GO:GO:0044030 GO:GO:0044154 GO:GO:0004402 GO:GO:0010385
GO:GO:0043971 UniGene:At.53322 UniGene:At.73310 IPI:IPI00540986
RefSeq:NP_188116.1 ProteinModelPortal:F4IXE7 SMR:F4IXE7
PRIDE:F4IXE7 EnsemblPlants:AT3G14980.1 GeneID:820727
KEGG:ath:AT3G14980 OMA:AECNSKL GO:GO:0043972 GO:GO:0080188
Uniprot:F4IXE7
Length = 1189
Score = 296 (109.3 bits), Expect = 8.6e-26, Sum P(2) = 8.6e-26
Identities = 93/327 (28%), Positives = 157/327 (48%)
Query: 543 SGWRCPNCRQGHSSSMSRSVDLKGGL-----EAPGAEVGGCVICRLSPSENFDIRLCRSH 597
+GWR + S V GG P C+ ++ P ++ C
Sbjct: 712 NGWRLEKASDDDPNDDSCGVCGDGGELICCDNCPSTFHQACLSMQVLPEGSWYCSSCTCW 771
Query: 598 DFSAATFD--DRTVIY-CDQCEKEFHVGCLRKNGLCDLKEIPKDKWFCCDDCNRIHAALQ 654
S D +R+ + C QC ++H CL+ G+ +++ + +FC +C +++ L
Sbjct: 772 ICSELVSDNAERSQDFKCSQCAHKYHGTCLQ--GISKRRKLFPETYFCGKNCEKVYNGL- 828
Query: 655 DFVSNRAQTI-P-ASSLSTINRKHIEKGILFDGTMNDVQWQMLKKAQCFEEKEKSLLSSA 712
S+R I P A LS K ++ DG ++ + ++ KA+C S L+ A
Sbjct: 829 ---SSRVGIINPNADGLSWSILKCFQE----DGMVHSAR-RLALKAEC-----NSKLAVA 875
Query: 713 TAIFRECFDPII-AECGRDLIPVMVY--GRNISGQEFGGMYSVILTVKSVVVSAGLLRIF 769
+I E F ++ G D+IP ++Y G + +F G Y+V++ V++S +R+
Sbjct: 876 LSIMEESFLSMVDPRTGIDMIPHVLYNWGSTFARLDFDGFYTVVVEKDDVMISVASIRVH 935
Query: 770 GREVAELPLVATCREYQGKGCFQALFSCIERLLCSLNVENLVLPAAEKAESIWTKKFGFR 829
G +AE+PLVATC +Y+ +G + L + IE +L SL VE LV+ A WT+ FGF+
Sbjct: 936 GVTIAEMPLVATCSKYRRQGMCRILVAAIEEMLMSLKVEKLVVAALPSLVETWTEGFGFK 995
Query: 830 KMSRERLLKYQRDFQLTIFKGTSMLEK 856
M E +R L +F GT++L+K
Sbjct: 996 PMDDEERDALKR-INLMVFPGTTLLKK 1021
Score = 195 (73.7 bits), Expect = 5.8e-11, Sum P(2) = 5.8e-11
Identities = 41/122 (33%), Positives = 61/122 (50%)
Query: 441 LRFGCKQGNGIVCDCCNKEISPSQFEAHAGMAARRQPYRHIYTSNGMTLHDIAISL--AM 498
++ G +G+VC CCNK +S S+F+ HAG + P +++ +G + A
Sbjct: 648 VKTGLVTKDGVVCTCCNKTVSLSEFKNHAGFN-QNCPCLNLFMGSGKPFASCQLEAWSAE 706
Query: 499 GQRRTTGG----------SDDMCHVCGDGENLLLCNGCPLAFHAACLDPLLIPESGWRCP 548
+ R G +DD C VCGDG L+ C+ CP FH ACL ++PE W C
Sbjct: 707 YKARRNGWRLEKASDDDPNDDSCGVCGDGGELICCDNCPSTFHQACLSMQVLPEGSWYCS 766
Query: 549 NC 550
+C
Sbjct: 767 SC 768
Score = 87 (35.7 bits), Expect = 8.6e-26, Sum P(2) = 8.6e-26
Identities = 20/51 (39%), Positives = 28/51 (54%)
Query: 242 GIVNGGGYLCGCPLCNFSKVVSAHEFEQHAGAKTRHPNNHIYLENGKPIYS 292
G+V G +C C CN K VS EF+ HAG P ++++ +GKP S
Sbjct: 651 GLVTKDGVVCTC--CN--KTVSLSEFKNHAGFNQNCPCLNLFMGSGKPFAS 697
Score = 49 (22.3 bits), Expect = 8.0e-22, Sum P(2) = 8.0e-22
Identities = 28/114 (24%), Positives = 46/114 (40%)
Query: 212 PTNV-KKLLSTGILDGACVKYISTSRERQLDGIVNGGGYLCGCPLCNFSKVVS--AHEFE 268
P N K+ L TG ++ C + + + +V G Y CP F S +F
Sbjct: 34 PGNTTKRCLVTGAINFECDSSKNVNSSLSSNSVVTSG-Y--ACPQ-GFEASASRDGSDFN 89
Query: 269 QHAGAKTRHPNNHIYL--ENGKPIYSI-IQEL--KTAPLGILEEVVKKVAGSSF 317
A N H+ E G ++ ++ +T PL ++E K V+ SS+
Sbjct: 90 TKAKRVKLSGNKHLDARDEKGSALHGFPTSDIARETIPLHLVESSNKGVSTSSY 143
>TAIR|locus:2163961 [details] [associations]
symbol:AT5G63900 "AT5G63900" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008080
"N-acetyltransferase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000182
InterPro:IPR001965 InterPro:IPR019787 PROSITE:PS50016
PROSITE:PS51186 SMART:SM00184 SMART:SM00249 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.40.630.30 InterPro:IPR016181 SUPFAM:SSF55729 EMBL:AB007646
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0008080 HSSP:Q14839 EMBL:AB493810
IPI:IPI00518981 RefSeq:NP_201195.1 UniGene:At.55695
ProteinModelPortal:Q9FMZ9 SMR:Q9FMZ9 EnsemblPlants:AT5G63900.1
GeneID:836510 KEGG:ath:AT5G63900 TAIR:At5g63900 eggNOG:NOG244493
HOGENOM:HOG000152567 InParanoid:Q9FMZ9 OMA:NSKLMAC PhylomeDB:Q9FMZ9
ProtClustDB:CLSN2914816 Genevestigator:Q9FMZ9 Uniprot:Q9FMZ9
Length = 557
Score = 225 (84.3 bits), Expect = 1.8e-23, Sum P(3) = 1.8e-23
Identities = 65/242 (26%), Positives = 122/242 (50%)
Query: 629 LCDLKEIPKD-KWFCCDDCNR-IH-AALQD---FVSNRAQTIPASSLSTINR-KHIEKGI 681
+C E P + K C+ C R H L++ VS+R + + +++
Sbjct: 303 ICGSMESPANSKLMACEQCQRRFHLTCLKEDSCIVSSRGWFCSSQCNRVFSALENLLGSK 362
Query: 682 LFDGTMNDVQWQMLK---KAQCFEEKEKSLLSSATAIFRECFDPII-AECGRDLIPVMVY 737
+ G D+ W +++ + + +++++ S L SA I + F+P GRDL+ ++Y
Sbjct: 363 IAVGNDGDLVWTLMRAPNEGEHYDDEQISKLESAVEILHQGFEPTNDVFSGRDLVEELIY 422
Query: 738 GRNISGQEFGGMYSVILTVKSVVVSAGLLRIFGREVAELPLVATCREYQGKGCFQALFSC 797
++ +G G Y+V++ K+ ++ +R+ ++V E+PLVAT Y+ G + L
Sbjct: 423 RKDRTGVG-RGFYTVLIERKNEPITVAAVRV-DKDVVEIPLVATLSSYRRSGMCRVLMDE 480
Query: 798 IERLLCSLNVENLVLPAAEKAESIWTKKFGFRKMSRERLLKYQRDFQLTIFKGTSMLEKK 857
+E+ + + V LVLPAA++ + WT++FGF M+ L+ + L F GT M K
Sbjct: 481 LEKQMSQMGVCRLVLPAAKEVVTTWTERFGFSVMNSSERLELVKHGMLD-FVGTIMCHKF 539
Query: 858 VQ 859
+Q
Sbjct: 540 LQ 541
Score = 128 (50.1 bits), Expect = 1.8e-23, Sum P(3) = 1.8e-23
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 509 DMCHVCGDGENLLLCNGCPLAFHAACLDPLLIPESG-WRCPNCRQGHSSSMSRSVDLKGG 567
D+C VC G +LLLC+GCP AFH ACL +PE W CP C D+ G
Sbjct: 257 DVCCVCHWGGDLLLCDGCPSAFHHACLGLSSLPEEDLWFCPCC----------CCDICGS 306
Query: 568 LEAPG-AEVGGCVICR 582
+E+P +++ C C+
Sbjct: 307 MESPANSKLMACEQCQ 322
Score = 104 (41.7 bits), Expect = 2.6e-10, Sum P(3) = 2.6e-10
Identities = 16/49 (32%), Positives = 31/49 (63%)
Query: 612 CDQCEKEFHVGCLRKNGLCDLKEIPKDKWFCCDDCNRIHAALQDFVSNR 660
C+QC++ FH+ CL+++ C + WFC CNR+ +AL++ + ++
Sbjct: 318 CEQCQRRFHLTCLKEDS-CI---VSSRGWFCSSQCNRVFSALENLLGSK 362
Score = 77 (32.2 bits), Expect = 2.2e-18, Sum P(4) = 2.2e-18
Identities = 18/47 (38%), Positives = 23/47 (48%)
Query: 609 VIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFC----CDDCNRIHA 651
++ CD C FH CL GL L E +D WFC CD C + +
Sbjct: 268 LLLCDGCPSAFHHACL---GLSSLPE--EDLWFCPCCCCDICGSMES 309
Score = 43 (20.2 bits), Expect = 1.8e-23, Sum P(3) = 1.8e-23
Identities = 15/65 (23%), Positives = 31/65 (47%)
Query: 105 EETLSDGD-ERTESSYAETSRTDNNSGDVSKSHVVLEIPKHVSSSSGIRKITFKFSKRKE 163
E LS G E S+ T+N +S + +++ +H+S+ + K +K+++
Sbjct: 10 EAELSPGAIEEWLSTVKHGKMTENGK---RRSDLSIKVKRHLSALGWVISYYNKRNKKEQ 66
Query: 164 DYVAP 168
Y +P
Sbjct: 67 RYKSP 71
Score = 40 (19.1 bits), Expect = 2.2e-18, Sum P(4) = 2.2e-18
Identities = 20/82 (24%), Positives = 31/82 (37%)
Query: 511 CHVCGDGENLLLCNGCPLAFHAACLDPLLIPESGWRCPNCRQGHSSSMSRSVDLKGGLEA 570
C C D ++ P + +CL + ES N +Q S R DL A
Sbjct: 83 CMSCVDQDSQQQLQIVP-KYDLSCLPSNIASESSSDVSNQKQKKSKKRGRVEDLDVKSTA 141
Query: 571 PGAEVGGCV-ICRLSPSENFDI 591
P + + ++ P NFD+
Sbjct: 142 PEKDNHPSADLIKIVP--NFDV 161
>TAIR|locus:2832118 [details] [associations]
symbol:AT5G36670 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
SMART:SM00384 EMBL:CP002688 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 InterPro:IPR020478 PRINTS:PR00929 Gene3D:3.40.630.30
InterPro:IPR016181 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 IPI:IPI00527539 RefSeq:NP_568537.1 UniGene:At.55161
ProteinModelPortal:F4K4G6 SMR:F4K4G6 EnsemblPlants:AT5G36670.1
GeneID:833632 KEGG:ath:AT5G36670 ArrayExpress:F4K4G6 Uniprot:F4K4G6
Length = 1193
Score = 205 (77.2 bits), Expect = 4.3e-19, Sum P(2) = 4.3e-19
Identities = 44/113 (38%), Positives = 58/113 (51%)
Query: 450 GIVCDCCNKEISPSQFEAHAGMAARRQPYRHIYTSNGMTL----HDI----AISLAMGQR 501
GI C+CC++ S FE HAG R QP++ +Y G +L H+ + S G
Sbjct: 581 GIRCNCCDEVFSVLDFEVHAG-GNRNQPFKSLYLEGGNSLLQCLHESMNKQSESQLKGYH 639
Query: 502 RTTGGS----DDMCHVCGDGENLLLCNGCPLAFHAACLDPLLIPESGWRCPNC 550
GS DD C +CGDG +L+ C+GCP FH +CLD P W C NC
Sbjct: 640 FVDFGSGDPNDDTCGICGDGGDLICCDGCPSTFHQSCLDIKKFPSGAWYCYNC 692
Score = 117 (46.2 bits), Expect = 4.3e-19, Sum P(2) = 4.3e-19
Identities = 48/221 (21%), Positives = 92/221 (41%)
Query: 612 CDQ-CEKEF------HVGCLRKNGLCDLKEIPKDKWFCCDDCNRIHAALQDFVSNRAQTI 664
C++ C K + H C+ ++G E D FC C + LQ F+ +
Sbjct: 719 CEEKCSKHYPHTLADHQACINQDGTVP-GERSTDS-FCGKYCQELFEELQLFIGVKHPLP 776
Query: 665 PASSLSTINRKHIEKGILFDGTMNDVQWQMLKKAQCFEEKEKSLLSSATAIFRECFDPII 724
S S + R + + D D+ ++ A+ ++ A ++ ECF P++
Sbjct: 777 EGFSWSFLRRFELPSEVA-DC---DISEKIAYNAK---------MAVAFSVMDECFSPLV 823
Query: 725 AE-CGRDLIPVMVY--GRNISGQEFGGMYSVILTVKSVVVSAGLLRIFGREVAELPLVAT 781
G +L+ +VY G N +F + +L +++ +RI G ++AE+P + T
Sbjct: 824 DHRSGVNLLQNIVYNFGSNFHRLDFSSFLTAVLERGDEIIAVASIRIHGNQLAEMPFIGT 883
Query: 782 CREYQGKGCFQALFSCIERLLCSLNVENLVLPAAEKAESIW 822
Y+ +G + L IE + + + L +E +W
Sbjct: 884 RYMYRRQGMCRRLMDGIESFVAYFS--QMFLAISEVLLDVW 922
Score = 90 (36.7 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 20/57 (35%), Positives = 28/57 (49%)
Query: 240 LDGIVNGGGYLCGCPLCNFSKVVSAHEFEQHAGAKTRHPNNHIYLENGKPIYSIIQE 296
L+GI+ G C C C+ +V S +FE HAG P +YLE G + + E
Sbjct: 573 LEGIITKEGIRCNC--CD--EVFSVLDFEVHAGGNRNQPFKSLYLEGGNSLLQCLHE 625
>ZFIN|ZDB-GENE-041111-187 [details] [associations]
symbol:chd4a "chromodomain helicase DNA binding
protein 4a" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-041111-187
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX004850
IPI:IPI00962864 Ensembl:ENSDART00000005453 ArrayExpress:F1QWV5
Bgee:F1QWV5 Uniprot:F1QWV5
Length = 1930
Score = 178 (67.7 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 48/156 (30%), Positives = 68/156 (43%)
Query: 509 DMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQGHSSSMSRSVDLKG 566
D C VC G ++LC+ CP A+H CLDP + PE W CP+C + +R D
Sbjct: 354 DYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGTWSCPHCEKMGIQWEARE-DASE 412
Query: 567 GLEAPGAEVGGCVICRLSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRK 626
G E E GG +E D + +F D ++ CD C +H+ CL
Sbjct: 413 GEE--DNEAGG-------EAEEDDHHM----EFCRVCKDGGELLCCDSCPSSYHIHCLNP 459
Query: 627 NGLCDLKEIPKDKWFC--CDDCNRIHAALQDFVSNR 660
L EIP +W C C C + +Q ++ R
Sbjct: 460 ----PLPEIPNGEWICPRCT-CPSMKGKVQKILTWR 490
>UNIPROTKB|E9PU01 [details] [associations]
symbol:Chd4 "Protein Chd4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI01016558 PRIDE:E9PU01 Ensembl:ENSRNOT00000055970
ArrayExpress:E9PU01 Uniprot:E9PU01
Length = 1915
Score = 187 (70.9 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 44/136 (32%), Positives = 62/136 (45%)
Query: 509 DMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQGHSSSMSRSVDLKG 566
D C VC G ++LC+ CP A+H CLDP + PE W CP+C + ++ + +G
Sbjct: 364 DYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQWEAKEDNSEG 423
Query: 567 GLEAPGAEVGGCVICRLSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRK 626
E EVGG P E D + +F D ++ CD C +H+ CL
Sbjct: 424 --EEILEEVGG------DPEEEDDHHM----EFCRVCKDGGELLCCDTCPSSYHIHCLNP 471
Query: 627 NGLCDLKEIPKDKWFC 642
L EIP +W C
Sbjct: 472 ----PLPEIPNGEWLC 483
Score = 44 (20.5 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 14/44 (31%), Positives = 19/44 (43%)
Query: 17 DVECSSRTESKQDRELLTDNVESDSFPNGKHAKEEALNDDIKSE 60
D E S T K+ ++ L E S K +EE +DD E
Sbjct: 97 DSEGSDYTPGKKKKKKLGPKKEKKSKSKRKEEEEEEDDDDDSKE 140
>UNIPROTKB|F1N3F6 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:ERMLLCR EMBL:DAAA02014463 IPI:IPI00877578
Ensembl:ENSBTAT00000019612 ArrayExpress:F1N3F6 Uniprot:F1N3F6
Length = 1934
Score = 187 (70.9 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 44/136 (32%), Positives = 62/136 (45%)
Query: 509 DMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQGHSSSMSRSVDLKG 566
D C VC G ++LC+ CP A+H CLDP + PE W CP+C + ++ + +G
Sbjct: 393 DYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQWEAKEDNSEG 452
Query: 567 GLEAPGAEVGGCVICRLSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRK 626
E EVGG P E D + +F D ++ CD C +H+ CL
Sbjct: 453 --EEILEEVGG------DPEEEDDHHM----EFCRVCKDGGELLCCDTCPSSYHIHCLNP 500
Query: 627 NGLCDLKEIPKDKWFC 642
L EIP +W C
Sbjct: 501 ----PLPEIPNGEWLC 512
Score = 44 (20.5 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 14/44 (31%), Positives = 19/44 (43%)
Query: 17 DVECSSRTESKQDRELLTDNVESDSFPNGKHAKEEALNDDIKSE 60
D E S T K+ ++ L E S K +EE +DD E
Sbjct: 124 DSEGSDYTPGKKKKKKLGPKKEKKSKSKRKEEEEEDEDDDDSKE 167
>UNIPROTKB|F1LM59 [details] [associations]
symbol:Chd4 "Protein Chd4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI00365698 PRIDE:F1LM59 Ensembl:ENSRNOT00000024864
ArrayExpress:F1LM59 Uniprot:F1LM59
Length = 1945
Score = 187 (70.9 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 44/136 (32%), Positives = 62/136 (45%)
Query: 509 DMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQGHSSSMSRSVDLKG 566
D C VC G ++LC+ CP A+H CLDP + PE W CP+C + ++ + +G
Sbjct: 392 DYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQWEAKEDNSEG 451
Query: 567 GLEAPGAEVGGCVICRLSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRK 626
E EVGG P E D + +F D ++ CD C +H+ CL
Sbjct: 452 --EEILEEVGG------DPEEEDDHHM----EFCRVCKDGGELLCCDTCPSSYHIHCLNP 499
Query: 627 NGLCDLKEIPKDKWFC 642
L EIP +W C
Sbjct: 500 ----PLPEIPNGEWLC 511
Score = 44 (20.5 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 14/44 (31%), Positives = 19/44 (43%)
Query: 17 DVECSSRTESKQDRELLTDNVESDSFPNGKHAKEEALNDDIKSE 60
D E S T K+ ++ L E S K +EE +DD E
Sbjct: 125 DSEGSDYTPGKKKKKKLGPKKEKKSKSKRKEEEEEEDDDDDSKE 168
>UNIPROTKB|E2RHA0 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 EMBL:AAEX03015287 RefSeq:XP_867754.2
Ensembl:ENSCAFT00000023774 GeneID:477714 KEGG:cfa:477714
Uniprot:E2RHA0
Length = 1912
Score = 187 (70.9 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 44/136 (32%), Positives = 62/136 (45%)
Query: 509 DMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQGHSSSMSRSVDLKG 566
D C VC G ++LC+ CP A+H CLDP + PE W CP+C + ++ + +G
Sbjct: 371 DYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQWEAKEDNSEG 430
Query: 567 GLEAPGAEVGGCVICRLSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRK 626
E EVGG P E D + +F D ++ CD C +H+ CL
Sbjct: 431 --EEILEEVGG------DPEEEDDHHM----EFCRVCKDGGELLCCDTCPSSYHIHCLNP 478
Query: 627 NGLCDLKEIPKDKWFC 642
L EIP +W C
Sbjct: 479 ----PLPEIPNGEWLC 490
Score = 43 (20.2 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 14/44 (31%), Positives = 19/44 (43%)
Query: 17 DVECSSRTESKQDRELLTDNVESDSFPNGKHAKEEALNDDIKSE 60
D E S T K+ ++ L E S K +EE +DD E
Sbjct: 104 DSEGSDYTPGKKKKKKLGPKKEKKSKSKRKEEEEEDDDDDDSKE 147
>UNIPROTKB|F1SLR5 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 OMA:ERMLLCR EMBL:CU914489 EMBL:GACC01000070
RefSeq:XP_003126577.3 UniGene:Ssc.25044 Ensembl:ENSSSCT00000000759
GeneID:100515610 KEGG:ssc:100515610 Uniprot:F1SLR5
Length = 1912
Score = 187 (70.9 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 44/136 (32%), Positives = 62/136 (45%)
Query: 509 DMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQGHSSSMSRSVDLKG 566
D C VC G ++LC+ CP A+H CLDP + PE W CP+C + ++ + +G
Sbjct: 371 DYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQWEAKEDNSEG 430
Query: 567 GLEAPGAEVGGCVICRLSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRK 626
E EVGG P E D + +F D ++ CD C +H+ CL
Sbjct: 431 --EEILEEVGG------DPEEEDDHHM----EFCRVCKDGGELLCCDTCPSSYHIHCLNP 478
Query: 627 NGLCDLKEIPKDKWFC 642
L EIP +W C
Sbjct: 479 ----PLPEIPNGEWLC 490
Score = 43 (20.2 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 14/44 (31%), Positives = 19/44 (43%)
Query: 17 DVECSSRTESKQDRELLTDNVESDSFPNGKHAKEEALNDDIKSE 60
D E S T K+ ++ L E S K +EE +DD E
Sbjct: 104 DSEGSDYTPGKKKKKKLGPKKEKKSKSKRKEEEEEDDDDDDSKE 147
>MGI|MGI:1344380 [details] [associations]
symbol:Chd4 "chromodomain helicase DNA binding protein 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=ISO] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016818
"hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0043234
"protein complex" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 MGI:MGI:1344380 Pfam:PF00385
GO:GO:0005524 GO:GO:0005737 GO:GO:0005813 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
GeneTree:ENSGT00560000076896 HOGENOM:HOG000231124
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
HOVERGEN:HBG005326 CTD:1108 KO:K11643 OrthoDB:EOG4WH8JX
ChiTaRS:CHD4 EMBL:BC058578 IPI:IPI00396802 RefSeq:NP_666091.1
UniGene:Mm.333388 ProteinModelPortal:Q6PDQ2 SMR:Q6PDQ2
DIP:DIP-59651N IntAct:Q6PDQ2 STRING:Q6PDQ2 PhosphoSite:Q6PDQ2
PaxDb:Q6PDQ2 PRIDE:Q6PDQ2 Ensembl:ENSMUST00000056889 GeneID:107932
KEGG:mmu:107932 UCSC:uc009dtk.1 NextBio:359735 PMAP-CutDB:Q6PDQ2
Bgee:Q6PDQ2 CleanEx:MM_CHD4 Genevestigator:Q6PDQ2
GermOnline:ENSMUSG00000063870 Uniprot:Q6PDQ2
Length = 1915
Score = 187 (70.9 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 44/136 (32%), Positives = 62/136 (45%)
Query: 509 DMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQGHSSSMSRSVDLKG 566
D C VC G ++LC+ CP A+H CLDP + PE W CP+C + ++ + +G
Sbjct: 364 DYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQWEAKEDNSEG 423
Query: 567 GLEAPGAEVGGCVICRLSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRK 626
E EVGG P E D + +F D ++ CD C +H+ CL
Sbjct: 424 --EEILEEVGG------DPEEEDDHHM----EFCRVCKDGGELLCCDTCPSSYHIHCLNP 471
Query: 627 NGLCDLKEIPKDKWFC 642
L EIP +W C
Sbjct: 472 ----PLPEIPNGEWLC 483
Score = 43 (20.2 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 14/44 (31%), Positives = 18/44 (40%)
Query: 17 DVECSSRTESKQDRELLTDNVESDSFPNGKHAKEEALNDDIKSE 60
D E S T K+ ++ L E S K +EE DD E
Sbjct: 97 DSEGSDYTPGKKKKKKLGPKKEKKSKSKRKEEEEEEDEDDDSKE 140
>UNIPROTKB|J9NW81 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:ERMLLCR EMBL:AAEX03015287 Ensembl:ENSCAFT00000048002
Uniprot:J9NW81
Length = 1932
Score = 187 (70.9 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 44/136 (32%), Positives = 62/136 (45%)
Query: 509 DMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQGHSSSMSRSVDLKG 566
D C VC G ++LC+ CP A+H CLDP + PE W CP+C + ++ + +G
Sbjct: 391 DYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQWEAKEDNSEG 450
Query: 567 GLEAPGAEVGGCVICRLSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRK 626
E EVGG P E D + +F D ++ CD C +H+ CL
Sbjct: 451 --EEILEEVGG------DPEEEDDHHM----EFCRVCKDGGELLCCDTCPSSYHIHCLNP 498
Query: 627 NGLCDLKEIPKDKWFC 642
L EIP +W C
Sbjct: 499 ----PLPEIPNGEWLC 510
Score = 43 (20.2 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 14/44 (31%), Positives = 19/44 (43%)
Query: 17 DVECSSRTESKQDRELLTDNVESDSFPNGKHAKEEALNDDIKSE 60
D E S T K+ ++ L E S K +EE +DD E
Sbjct: 124 DSEGSDYTPGKKKKKKLGPKKEKKSKSKRKEEEEEDDDDDDSKE 167
>UNIPROTKB|H7C2H0 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR000953 InterPro:IPR001965
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00628 Pfam:PF08073
PROSITE:PS50013 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
SMART:SM00298 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR023780 HGNC:HGNC:1918 ChiTaRS:CHD3 EMBL:AC104581
GO:GO:0016818 Ensembl:ENST00000452447 Uniprot:H7C2H0
Length = 525
Score = 168 (64.2 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 41/136 (30%), Positives = 59/136 (43%)
Query: 509 DMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQGHSSSMSRSVDLKG 566
D C VC G ++LC+ CP A+H CLDP L PE W CP+C + ++ + +
Sbjct: 251 DYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQWEAKEEEEE- 309
Query: 567 GLEAPGAEVGGCVICRLSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRK 626
E G E G E+ + CR D ++ CD C +H+ CL
Sbjct: 310 -YEEEGEEEGE------KEEEDDHMEYCR------VCKDGGELLCCDACISSYHIHCLNP 356
Query: 627 NGLCDLKEIPKDKWFC 642
L +IP +W C
Sbjct: 357 ----PLPDIPNGEWLC 368
>UNIPROTKB|F5GWX5 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:AC006064
IPI:IPI00000846 HGNC:HGNC:1919 ChiTaRS:CHD4
ProteinModelPortal:F5GWX5 SMR:F5GWX5 PRIDE:F5GWX5
Ensembl:ENST00000544040 UCSC:uc001qpn.3 ArrayExpress:F5GWX5
Bgee:F5GWX5 Uniprot:F5GWX5
Length = 1905
Score = 184 (69.8 bits), Expect = 8.4e-09, Sum P(2) = 8.4e-09
Identities = 43/136 (31%), Positives = 62/136 (45%)
Query: 509 DMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQGHSSSMSRSVDLKG 566
D C VC G ++LC+ CP A+H CLDP + PE W CP+C + ++ + +G
Sbjct: 364 DYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQWEAKEDNSEG 423
Query: 567 GLEAPGAEVGGCVICRLSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRK 626
E EVGG L ++ + CR D ++ CD C +H+ CL
Sbjct: 424 --EEILEEVGG----DLEEEDDHHMEFCR------VCKDGGELLCCDTCPSSYHIHCLNP 471
Query: 627 NGLCDLKEIPKDKWFC 642
L EIP +W C
Sbjct: 472 ----PLPEIPNGEWLC 483
Score = 44 (20.5 bits), Expect = 8.4e-09, Sum P(2) = 8.4e-09
Identities = 14/44 (31%), Positives = 19/44 (43%)
Query: 17 DVECSSRTESKQDRELLTDNVESDSFPNGKHAKEEALNDDIKSE 60
D E S T K+ ++ L E S K +EE +DD E
Sbjct: 97 DSEGSDYTPGKKKKKKLGPKKEKKSKSKRKEEEEEEDDDDDSKE 140
>UNIPROTKB|Q14839 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005813 "centrosome" evidence=IDA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006357 GO:GO:0006351 GO:GO:0016568
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786 PROSITE:PS01359
Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 EMBL:X86691
EMBL:AC006064 EMBL:BC038596 IPI:IPI00000846 IPI:IPI00455210
RefSeq:NP_001264.2 UniGene:Hs.162233 PDB:1MM2 PDB:1MM3 PDB:2EE1
PDB:2L5U PDB:2L75 PDBsum:1MM2 PDBsum:1MM3 PDBsum:2EE1 PDBsum:2L5U
PDBsum:2L75 ProteinModelPortal:Q14839 SMR:Q14839 DIP:DIP-31183N
IntAct:Q14839 MINT:MINT-349766 STRING:Q14839 PhosphoSite:Q14839
DMDM:311033360 PaxDb:Q14839 PRIDE:Q14839 DNASU:1108
Ensembl:ENST00000309577 Ensembl:ENST00000357008
Ensembl:ENST00000544484 GeneID:1108 KEGG:hsa:1108 UCSC:uc001qpo.3
UCSC:uc001qpp.3 CTD:1108 GeneCards:GC12M006679 H-InvDB:HIX0201859
HGNC:HGNC:1919 HPA:HPA012008 MIM:603277 neXtProt:NX_Q14839
PharmGKB:PA26455 KO:K11643 OMA:ERMLLCR OrthoDB:EOG4WH8JX
ChiTaRS:CHD4 EvolutionaryTrace:Q14839 GenomeRNAi:1108 NextBio:4598
PMAP-CutDB:Q14839 ArrayExpress:Q14839 Bgee:Q14839 CleanEx:HS_CHD4
Genevestigator:Q14839 GermOnline:ENSG00000111642 Uniprot:Q14839
Length = 1912
Score = 184 (69.8 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 43/136 (31%), Positives = 62/136 (45%)
Query: 509 DMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQGHSSSMSRSVDLKG 566
D C VC G ++LC+ CP A+H CLDP + PE W CP+C + ++ + +G
Sbjct: 371 DYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQWEAKEDNSEG 430
Query: 567 GLEAPGAEVGGCVICRLSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRK 626
E EVGG L ++ + CR D ++ CD C +H+ CL
Sbjct: 431 --EEILEEVGG----DLEEEDDHHMEFCR------VCKDGGELLCCDTCPSSYHIHCLNP 478
Query: 627 NGLCDLKEIPKDKWFC 642
L EIP +W C
Sbjct: 479 ----PLPEIPNGEWLC 490
Score = 44 (20.5 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 14/44 (31%), Positives = 19/44 (43%)
Query: 17 DVECSSRTESKQDRELLTDNVESDSFPNGKHAKEEALNDDIKSE 60
D E S T K+ ++ L E S K +EE +DD E
Sbjct: 104 DSEGSDYTPGKKKKKKLGPKKEKKSKSKRKEEEEEEDDDDDSKE 147
>UNIPROTKB|F1NH79 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:AADN02061139 EMBL:AADN02061140 EMBL:AADN02061141
EMBL:AADN02061142 EMBL:AADN02061143 IPI:IPI00598956
Ensembl:ENSGALT00000023339 OMA:DGEHEHQ Uniprot:F1NH79
Length = 1895
Score = 175 (66.7 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 40/136 (29%), Positives = 58/136 (42%)
Query: 509 DMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQGHSSSMSRSVDLKG 566
D C VC G ++LC+ CP A+H CLDP + PE W CP+C + D
Sbjct: 341 DYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEK-EGIQWEAKED--- 396
Query: 567 GLEAPGAEVGGCVICRLSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRK 626
+ G E+ V+ ++ + CR D ++ CD C +H+ CL
Sbjct: 397 --NSEGEEILEDVVGDAEEEDDHHMEFCR------VCKDGGELLCCDACPSSYHIHCLNP 448
Query: 627 NGLCDLKEIPKDKWFC 642
L EIP +W C
Sbjct: 449 ----PLPEIPNGEWLC 460
Score = 46 (21.3 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 20/74 (27%), Positives = 30/74 (40%)
Query: 17 DVECSSRTESKQDRELLTDNVESDSFPNGKHAKEEALNDDIKSEVSNPVVSPKEFTSSLQ 76
D E S T K+ ++ L E S K ++E DD E PK T L+
Sbjct: 73 DSEGSDYTPGKKKKKKLGPKKEKKSKAKRKEEEDEEEEDDDSKE-------PKSSTQLLE 125
Query: 77 DITSQETKLVTESC 90
D + +V++ C
Sbjct: 126 DWGMEN--IVSQFC 137
>UNIPROTKB|F1ST12 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 CTD:1107 KO:K11642 OMA:EPEPGYR
EMBL:CU972380 RefSeq:XP_003132000.1 UniGene:Ssc.1663
Ensembl:ENSSSCT00000019548 GeneID:100188906 KEGG:ssc:100188906
Uniprot:F1ST12
Length = 2002
Score = 172 (65.6 bits), Expect = 8.5e-08, Sum P(2) = 8.5e-08
Identities = 42/136 (30%), Positives = 58/136 (42%)
Query: 509 DMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQGHSSSMSRSVDLKG 566
D C VC G ++LC+ CP A+H CLDP L PE W CP+C + ++ D
Sbjct: 380 DYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQWEAKEED--D 437
Query: 567 GLEAPGAEVGGCVICRLSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRK 626
E G E G E+ + CR D ++ CD C +H+ CL
Sbjct: 438 DYEEEGEEEGE------KEEEDDHMEYCR------VCKDGGELLCCDACISSYHIHCLNP 485
Query: 627 NGLCDLKEIPKDKWFC 642
L +IP +W C
Sbjct: 486 ----PLPDIPNGEWLC 497
Score = 47 (21.6 bits), Expect = 8.5e-08, Sum P(2) = 8.5e-08
Identities = 15/57 (26%), Positives = 27/57 (47%)
Query: 376 TGREQTHMKEMLEERKRGVKRPFMHQKRTAEGGTKKRDNDLHRLLFLPNGLPDGERL 432
TG + ++ E++++ KR +K +GG K+ + L L GL D E +
Sbjct: 97 TGPGRKRRRKHREKKEKKTKR---RKKGEGDGGQKQVEQKSSATLLLTWGLEDVEHV 150
>UNIPROTKB|F1N544 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:DAAA02048806
IPI:IPI00716282 Ensembl:ENSBTAT00000019119 ArrayExpress:F1N544
Uniprot:F1N544
Length = 1998
Score = 169 (64.5 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 41/136 (30%), Positives = 58/136 (42%)
Query: 509 DMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQGHSSSMSRSVDLKG 566
D C VC G ++LC+ CP A+H CLDP L PE W CP+C + + + +
Sbjct: 376 DYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEK--EGVQWEAKEEEE 433
Query: 567 GLEAPGAEVGGCVICRLSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRK 626
E G E G E+ + CR D ++ CD C +H+ CL
Sbjct: 434 DYEEEGEEEGE------KEEEDDHMEYCR------VCKDGGELLCCDACISSYHIHCLNP 481
Query: 627 NGLCDLKEIPKDKWFC 642
L +IP +W C
Sbjct: 482 ----PLPDIPNGEWLC 493
Score = 50 (22.7 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 16/57 (28%), Positives = 27/57 (47%)
Query: 376 TGREQTHMKEMLEERKRGVKRPFMHQKRTAEGGTKKRDNDLHRLLFLPNGLPDGERL 432
TG + ++ E++++ KR +K EGG K+ + L L GL D E +
Sbjct: 93 TGPGRKRRRKHREKKEKKTKR---RKKGEGEGGQKQVEQKSSATLLLTWGLEDVEHV 146
>UNIPROTKB|F1NH78 [details] [associations]
symbol:F1NH78 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:AADN02040929 EMBL:AADN02040930 IPI:IPI00571784
Ensembl:ENSGALT00000023340 ArrayExpress:F1NH78 Uniprot:F1NH78
Length = 1781
Score = 143 (55.4 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 29/79 (36%), Positives = 40/79 (50%)
Query: 509 DMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNC-RQGHSSSMSRSVDLK 565
D C VC G ++LC+ CP A+H CLDP L PE W CP+C ++G D +
Sbjct: 274 DYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKEEEDEE 333
Query: 566 --GGLEAPGAEVGGCVICR 582
GG E + C +C+
Sbjct: 334 EEGGEEEEDDHMEFCRVCK 352
Score = 74 (31.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 31/130 (23%), Positives = 48/130 (36%)
Query: 598 DFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFC--CD-DCNRIHAALQ 654
+F D ++ CD C +H+ CL L EIP +W C C C + +Q
Sbjct: 346 EFCRVCKDGGELLCCDTCPSSYHLHCLNP----PLPEIPNGEWLCPRCTPQCPPLKGKVQ 401
Query: 655 DFVSNRAQTIPASSLSTINRKHIEKGI----LFDGTMND---VQWQMLKKAQCFEEKEKS 707
+ + PA S + E + + +G V+W L C KE
Sbjct: 402 RILHWAWKEPPAPLPSALPAPDAELALPLPKVLEGIPEREFFVKWAGLSYWHCSWVKELQ 461
Query: 708 LLSSATAIFR 717
L T ++R
Sbjct: 462 LELYHTVMYR 471
>UNIPROTKB|C9JFR1 [details] [associations]
symbol:AIRE "Autoimmune regulator" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AP001060 IPI:IPI00031188
HGNC:HGNC:360 ProteinModelPortal:C9JFR1 SMR:C9JFR1 STRING:C9JFR1
Ensembl:ENST00000329347 HOGENOM:HOG000207903 ArrayExpress:C9JFR1
Bgee:C9JFR1 Uniprot:C9JFR1
Length = 244
Score = 147 (56.8 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 26/48 (54%), Positives = 31/48 (64%)
Query: 507 SDDMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQ 552
++D C VC DG L+ C+GCP AFH ACL P L IP WRC +C Q
Sbjct: 88 NEDECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQ 135
>UNIPROTKB|I3LQA6 [details] [associations]
symbol:AIRE "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006959 "humoral
immune response" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0045182 "translation regulator activity"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000770
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR008087
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414
SMART:SM00184 SMART:SM00249 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0006417 GO:GO:0046872 GO:GO:0015629
GO:GO:0008270 GO:GO:0045944 GO:GO:0003682 GO:GO:0045182
GO:GO:0044212 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 OMA:NDDECAV GO:GO:0006959 Gene3D:3.10.390.10
InterPro:IPR010919 SUPFAM:SSF63763 GeneTree:ENSGT00440000034278
EMBL:FP312783 Ensembl:ENSSSCT00000030488 Uniprot:I3LQA6
Length = 564
Score = 157 (60.3 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 28/51 (54%), Positives = 33/51 (64%)
Query: 507 SDDMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQGHS 555
++D C VC DG L+ C+GCP AFH ACL P L IP WRC +C QG S
Sbjct: 303 NEDECAVCRDGGELICCDGCPRAFHLACLSPPLRDIPSGTWRCSSCLQGRS 353
Score = 46 (21.3 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 14/47 (29%), Positives = 17/47 (36%)
Query: 605 DDRTVIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFCCDDCNRIHA 651
D V+ C C FH C G P+ + FC D HA
Sbjct: 447 DGADVLRCAHCAAAFHWRCHFPAGAARPGASPRCR-FCSGDPAPCHA 492
>UNIPROTKB|Q12873 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0004386 "helicase activity" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0008270
"zinc ion binding" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007051 "spindle organization" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0051297 "centrosome organization" evidence=IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=TAS] [GO:0016581 "NuRD complex" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IDA] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
EMBL:CH471108 GO:GO:0005730 GO:GO:0051297 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006357 GO:GO:0006351
GO:GO:0016568 Gene3D:1.10.30.10 GO:GO:0045111 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004003
InterPro:IPR019786 PROSITE:PS01359
Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0007051 GO:GO:0016581 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 HOGENOM:HOG000231124
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1107 EMBL:U91543 EMBL:AF006515 EMBL:U08379 IPI:IPI00373870
IPI:IPI00411592 RefSeq:NP_001005271.2 RefSeq:NP_001005273.1
RefSeq:NP_005843.2 UniGene:Hs.25601 ProteinModelPortal:Q12873
SMR:Q12873 DIP:DIP-32496N IntAct:Q12873 MINT:MINT-1185641
STRING:Q12873 PhosphoSite:Q12873 DMDM:88911273 PaxDb:Q12873
PRIDE:Q12873 Ensembl:ENST00000330494 Ensembl:ENST00000358181
GeneID:1107 KEGG:hsa:1107 UCSC:uc002gje.2 UCSC:uc002gjf.2
GeneCards:GC17P007788 H-InvDB:HIX0013516 HGNC:HGNC:1918
HPA:HPA043368 MIM:602120 neXtProt:NX_Q12873 PharmGKB:PA26454
HOVERGEN:HBG005326 KO:K11642 PhylomeDB:Q12873 ChiTaRS:CHD3
GenomeRNAi:1107 NextBio:4590 ArrayExpress:Q12873 Bgee:Q12873
CleanEx:HS_CHD3 Genevestigator:Q12873 GermOnline:ENSG00000170004
Uniprot:Q12873
Length = 2000
Score = 168 (64.2 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 41/136 (30%), Positives = 59/136 (43%)
Query: 509 DMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQGHSSSMSRSVDLKG 566
D C VC G ++LC+ CP A+H CLDP L PE W CP+C + ++ + +
Sbjct: 380 DYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQWEAKEEEEE- 438
Query: 567 GLEAPGAEVGGCVICRLSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRK 626
E G E G E+ + CR D ++ CD C +H+ CL
Sbjct: 439 -YEEEGEEEGE------KEEEDDHMEYCR------VCKDGGELLCCDACISSYHIHCLNP 485
Query: 627 NGLCDLKEIPKDKWFC 642
L +IP +W C
Sbjct: 486 ----PLPDIPNGEWLC 497
Score = 47 (21.6 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 15/57 (26%), Positives = 27/57 (47%)
Query: 376 TGREQTHMKEMLEERKRGVKRPFMHQKRTAEGGTKKRDNDLHRLLFLPNGLPDGERL 432
TG + ++ E++++ KR +K +GG K+ + L L GL D E +
Sbjct: 97 TGPGRKRRRKHREKKEKKTKR---RKKGEGDGGQKQVEQKSSATLLLTWGLEDVEHV 150
>ZFIN|ZDB-GENE-030131-4532 [details] [associations]
symbol:chd4b "chromodomain helicase DNA binding
protein 4b" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-030131-4532
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX511250
IPI:IPI00931161 RefSeq:XP_685699.4 UniGene:Dr.75373
Ensembl:ENSDART00000092902 Ensembl:ENSDART00000148389 GeneID:560622
KEGG:dre:560622 CTD:560622 NextBio:20883532 Uniprot:F1RBT2
Length = 1953
Score = 170 (64.9 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 41/137 (29%), Positives = 59/137 (43%)
Query: 509 DMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQGHSSSMSRSVDLKG 566
D C VC G ++LC+ CP A+H CLDP + PE W CP+C + +R +G
Sbjct: 376 DYCEVCQQGGEIILCDTCPRAYHMVCLDPDMERAPEGTWSCPHCEKEGIQWEAREESSEG 435
Query: 567 GLEAP-GAEVGGCVICRLSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEFHVGCLR 625
E G G V ++ + CR D ++ CD C +H+ CL
Sbjct: 436 EEENDDGRRDDGDV----EEEDDHHMEFCR------VCKDGGELLCCDTCPSSYHLHCLN 485
Query: 626 KNGLCDLKEIPKDKWFC 642
L +IP +W C
Sbjct: 486 P----PLPDIPNGEWIC 498
Score = 44 (20.5 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 25 ESKQDRELLTDNVESDSFPNGKHAKEEALNDDIK 58
E ++DR + +++ SD P+ K K + + D K
Sbjct: 72 EEEEDRVMRSESEGSDYAPSKKKKKRSSSSKDRK 105
Score = 42 (19.8 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 13 DGEMDVECSSRTESKQDRELLTDNVESDSFPNGKHAKEEA 52
DGE D + S ++ R + N ++ S K E+A
Sbjct: 328 DGESDFDSFSVSDGSNSRSSRSKNKKAKSSKKKKKMDEDA 367
Score = 39 (18.8 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 16/73 (21%), Positives = 30/73 (41%)
Query: 62 SNPVVSPKEFTSSLQDITSQETKLVTESCNQVLSTTSTGNLSSEETLSDGDERTESSYAE 121
+ P P++ S + + + KL N +S+G E+ D ++ S +
Sbjct: 290 TKPTPKPQDKKSKAKKVAPLKIKLG----NFKRKRSSSGEEDDGESDFDSFSVSDGSNSR 345
Query: 122 TSRTDNNSGDVSK 134
+SR+ N SK
Sbjct: 346 SSRSKNKKAKSSK 358
>UNIPROTKB|F1NRM1 [details] [associations]
symbol:F1NRM1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0045182 "translation regulator
activity" evidence=IEA] InterPro:IPR001965 InterPro:IPR004865
InterPro:IPR008087 InterPro:IPR019787 Pfam:PF00628 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS51414 SMART:SM00249
GO:GO:0005634 GO:GO:0005737 GO:GO:0006417 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0045182 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0006959
GeneTree:ENSGT00440000034278 EMBL:AADN02024441 EMBL:AADN02024442
IPI:IPI01017196 Ensembl:ENSGALT00000041318 ArrayExpress:F1NRM1
Uniprot:F1NRM1
Length = 537
Score = 134 (52.2 bits), Expect = 6.3e-05, Sum P(3) = 6.3e-05
Identities = 23/46 (50%), Positives = 29/46 (63%)
Query: 507 SDDMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNC 550
++D C VCGDG L+ C+GCP AFH CL P L +P W C +C
Sbjct: 423 NEDECAVCGDGGELICCDGCPRAFHLPCLVPPLPRVPRGLWLCSSC 468
Score = 118 (46.6 bits), Expect = 5.2e-07, Sum P(4) = 5.2e-07
Identities = 25/61 (40%), Positives = 33/61 (54%)
Query: 507 SDDMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESG----WRCPNCRQGHSSSMSR 560
++D C VCGDG L+ C+GCP AFH CL P L +P W C + H S+ R
Sbjct: 291 NEDECAVCGDGGELICCDGCPRAFHLPCLVPPLPRVPSPATAPLWNCTHT--AHHSTDGR 348
Query: 561 S 561
+
Sbjct: 349 T 349
Score = 77 (32.2 bits), Expect = 5.2e-07, Sum P(4) = 5.2e-07
Identities = 31/115 (26%), Positives = 51/115 (44%)
Query: 596 SHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFCCDDCNRI-----H 650
+ D A D +I CD C + FH+ CL + L +P+ W C C I H
Sbjct: 423 NEDECAVCGDGGELICCDGCPRAFHLPCL----VPPLPRVPRGLWLC-SSCTGIPETGSH 477
Query: 651 ---AALQDFV--SNRAQTIPASSLSTINRKHIEKGILFDGTMNDV-QWQMLKKAQ 699
AA + V + + + ASS +R+ ++ +L +GT + + QW A+
Sbjct: 478 ESSAAAGERVLLAAKLENGSASSDPMSSREELD-ALLSEGTWDGILQWAFQSMAR 531
Score = 49 (22.3 bits), Expect = 5.2e-07, Sum P(4) = 5.2e-07
Identities = 22/89 (24%), Positives = 39/89 (43%)
Query: 96 TTSTGNLSSEETLSDGDERTESSYAETSRTDNNSGDVSKSHVVL--EIPKHVSSSSG--- 150
TTS G L+ T+ + TS T+ + V ++ +V E+P ++ G
Sbjct: 150 TTSPGLLAKARTVKKPESADTPRTPRTSATNLPAASVQRAVMVAASEVPVTCGATEGKHV 209
Query: 151 -IRKI-----TFKFSKRKEDYVAPLAYEE 173
IR + T S+ ++++ P A EE
Sbjct: 210 LIRHVQELGSTKAGSRARDEFCVPAAGEE 238
Score = 37 (18.1 bits), Expect = 5.2e-07, Sum P(4) = 5.2e-07
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 11 PADGEMDVECSSRTES 26
PA+ ++ +CSSR S
Sbjct: 101 PAEVDLGQQCSSRRPS 116
>CGD|CAL0003038 [details] [associations]
symbol:orf19.6506 species:5476 "Candida albicans" [GO:0032221
"Rpd3S complex" evidence=IEA] [GO:0033698 "Rpd3L complex"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0060195 "negative
regulation of antisense RNA transcription" evidence=IEA]
[GO:0030174 "regulation of DNA-dependent DNA replication
initiation" evidence=IEA] [GO:0016575 "histone deacetylation"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 CGD:CAL0003038 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AACQ01000020 EMBL:AACQ01000016
eggNOG:NOG145066 RefSeq:XP_720831.1 RefSeq:XP_721344.1
RefSeq:XP_888831.1 ProteinModelPortal:Q5AH34 GeneID:3637022
GeneID:3637451 GeneID:3703842 KEGG:cal:CaO19.13859
KEGG:cal:CaO19.6506 KEGG:cal:CaO19_6506 Uniprot:Q5AH34
Length = 688
Score = 104 (41.7 bits), Expect = 5.3e-07, Sum P(3) = 5.3e-07
Identities = 18/46 (39%), Positives = 22/46 (47%)
Query: 507 SDDMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNC 550
+DD C CG + C CP +FH C DP + PE W C C
Sbjct: 269 NDDFCFACGMPGIFICCEKCPKSFHFTCCDPPIEEAPEDEWYCREC 314
Score = 89 (36.4 bits), Expect = 5.3e-07, Sum P(3) = 5.3e-07
Identities = 26/76 (34%), Positives = 37/76 (48%)
Query: 572 GAEVGGC---VICRLSP--SENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRK 626
G+++ GC V + +EN D LC H + + RT+I+CD C +H+ CL
Sbjct: 385 GSQIPGCNRDVTLEIDDLYNENGDPYLC--HKCGGSGLNRRTLIHCDYCPLVYHIDCLDP 442
Query: 627 NGLCDLKEIPKDKWFC 642
L K I DKW C
Sbjct: 443 P-LFGPKTIG-DKWRC 456
Score = 54 (24.1 bits), Expect = 5.3e-07, Sum P(3) = 5.3e-07
Identities = 54/251 (21%), Positives = 93/251 (37%)
Query: 19 ECSSRTESKQDRELLTDNVES-DSFPNGKHAKEEALNDDIKSEVSNPVVSPKEF--TSSL 75
E S+ +S + +L +++ + P K ++ + + + V P+ T S
Sbjct: 44 EVKSKRKSARIAQLEAESIPKLSASPEIKEGRKSSKPGSVSGNGNTVFVEPELAAPTPSY 103
Query: 76 QDITSQE---TKLVTESCNQV-LSTTSTGNLSSEETLSDGDE----RTESSYAETSRTDN 127
+ +E K+ ES T + + S E T + GDE + E+ Y +T +
Sbjct: 104 TGLPLEEFPSNKIKKESLWPAKYRRTKSSDSSRESTATPGDEIDTNKVEADYQHNLKT-S 162
Query: 128 NSGDVSK-SHVVLEIPKHVSSSSGIRKITFKFSKRKEDYVAPLAYEEGRNYTLYDDLGSS 186
S D++K S + + +SS R K + R P E G+ L S
Sbjct: 163 LSEDLAKESELRQSLLNEKTSSKPKRTTRLKLTLR-----TP-TQETGKQQQQKRSLDGS 216
Query: 187 GANDGVLCARNMEIKMSKKVVPNEYPTNVKKLLSTGILDGACVKYISTSRERQLDGIVNG 246
AN A+ +K K P + P KL +G+ VK + + V
Sbjct: 217 -AN-----AKQRPLKKIKVTSPTKSPRT--KLFDAKTSNGSIVKQEKDKHHEEEEEEVKE 268
Query: 247 GG---YLCGCP 254
+ CG P
Sbjct: 269 NDDFCFACGMP 279
>ZFIN|ZDB-GENE-071008-4 [details] [associations]
symbol:aire "autoimmune regulator" species:7955
"Danio rerio" [GO:0045182 "translation regulator activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006959
"humoral immune response" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000770
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR008087
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414
SMART:SM00184 SMART:SM00249 ZFIN:ZDB-GENE-071008-4 GO:GO:0005634
GO:GO:0005737 GO:GO:0006417 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0045182 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0006959 Gene3D:3.10.390.10 InterPro:IPR010919
SUPFAM:SSF63763 GeneTree:ENSGT00440000034278 EMBL:BX649390
IPI:IPI00876716 Ensembl:ENSDART00000079317 Bgee:F1Q623
Uniprot:F1Q623
Length = 513
Score = 141 (54.7 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 33/90 (36%), Positives = 45/90 (50%)
Query: 467 AHAGMAARRQPY-RHIYTSNGMTLHDIAISLAMGQRRTTG--GSDDMCHVCGDGENLLLC 523
AH +R+P R + + +A+ Q+ T +DD C VC DG L+ C
Sbjct: 250 AHTSSHQQREPSSRGTGLATPGLQYVVAVLTCYPQKMTFAVEHNDDECAVCKDGGELICC 309
Query: 524 NGCPLAFHAACLDPLL--IPESGWRCPNCR 551
+GCP AFH +CL P L IP WRC C+
Sbjct: 310 DGCPRAFHLSCLVPPLTSIPRGTWRCQLCQ 339
Score = 53 (23.7 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 20/87 (22%), Positives = 42/87 (48%)
Query: 609 VIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFCCDDCNRIHAALQ--DFVSNRAQTIPA 666
+I C QC + +H C NG + + W +D + +LQ +S++ T P+
Sbjct: 415 LITCPQCLQAYHALCNFPNGRTRCRNCSRS-WGPGNDNSSTCRSLQLSQHMSDQGLT-PS 472
Query: 667 SSLSTINRKHIEKGILFDGTMNDV-QW 692
L +NR ++ ++ + +++ + QW
Sbjct: 473 EQL--LNRDEMDS-VMGESSIDGILQW 496
>UNIPROTKB|C9JL37 [details] [associations]
symbol:AIRE "Autoimmune regulator" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AP001060 HGNC:HGNC:360
HOGENOM:HOG000060093 IPI:IPI00480202 ProteinModelPortal:C9JL37
SMR:C9JL37 STRING:C9JL37 Ensembl:ENST00000355347
ArrayExpress:C9JL37 Bgee:C9JL37 Uniprot:C9JL37
Length = 338
Score = 147 (56.8 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 26/48 (54%), Positives = 31/48 (64%)
Query: 507 SDDMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQ 552
++D C VC DG L+ C+GCP AFH ACL P L IP WRC +C Q
Sbjct: 88 NEDECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQ 135
Score = 39 (18.8 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 7/19 (36%), Positives = 8/19 (42%)
Query: 605 DDRTVIYCDQCEKEFHVGC 623
D V+ C C FH C
Sbjct: 232 DGTDVLRCTHCAAAFHWRC 250
>UNIPROTKB|F1SSZ2 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:FP102454 Ensembl:ENSSSCT00000019561 Uniprot:F1SSZ2
Length = 1667
Score = 152 (58.6 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 36/118 (30%), Positives = 51/118 (43%)
Query: 509 DMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQGHSSSMSRSVDLKG 566
D C VC G ++LC+ CP A+H CLDP L PE W CP+C + + +
Sbjct: 260 DYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEK-------EGIQWEP 312
Query: 567 GLEAPGAEVGGCVICRLSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEFHVGCL 624
+ E GGC E+ + CR D ++ CD C +H+ CL
Sbjct: 313 KDDDDEEEEGGC-----EEEEDDHMEFCR------VCKDGGELLCCDACPSSYHLHCL 359
>UNIPROTKB|E2R1M3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:AAEX03003895 EMBL:AAEX03003896 EMBL:AAEX03003897
Ensembl:ENSCAFT00000031086 Uniprot:E2R1M3
Length = 1812
Score = 152 (58.6 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 36/118 (30%), Positives = 51/118 (43%)
Query: 509 DMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQGHSSSMSRSVDLKG 566
D C VC G ++LC+ CP A+H CLDP L PE W CP+C + + +
Sbjct: 207 DYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEK-------EGIQWEP 259
Query: 567 GLEAPGAEVGGCVICRLSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEFHVGCL 624
+ E GGC E+ + CR D ++ CD C +H+ CL
Sbjct: 260 KDDDDEEEEGGC-----EEEEDDHMEFCR------VCKDGGELLCCDACPSSYHLHCL 306
>RGD|1307955 [details] [associations]
symbol:Whsc1 "Wolf-Hirschhorn syndrome candidate 1"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003149 "membranous septum morphogenesis" evidence=ISO]
[GO:0003289 "atrial septum primum morphogenesis" evidence=ISO]
[GO:0003290 "atrial septum secundum morphogenesis" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0016568 "chromatin modification" evidence=ISO]
[GO:0018022 "peptidyl-lysine methylation" evidence=ISO] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=ISO]
[GO:0031965 "nuclear membrane" evidence=ISO] [GO:0034968 "histone
lysine methylation" evidence=ISO] [GO:0060348 "bone development"
evidence=ISO] REFSEQ:NM_001191552 Ncbi:NP_001178481
Length = 1346
Score = 126 (49.4 bits), Expect = 2.5e-06, Sum P(3) = 2.5e-06
Identities = 23/55 (41%), Positives = 30/55 (54%)
Query: 499 GQRRTTGGSDDMCHVCGDGENLLLCNGCPLAFHAACLDPLLIPESGWRCPNCRQG 553
G+R T + C VC G +LL C CP AFH CL + +P+ W C +CR G
Sbjct: 803 GKRHHTHVNVSWCFVCSKGGSLLCCEACPAAFHPDCLS-IEMPDGSWFCNDCRAG 856
Score = 63 (27.2 bits), Expect = 2.5e-06, Sum P(3) = 2.5e-06
Identities = 27/125 (21%), Positives = 54/125 (43%)
Query: 15 EMDVECSSRTESKQDRELLTDNVESDSFPNGKHAKEEALN--DDIKSEVSNPVVSPKEFT 72
++DVE + R + D+ L E+ + + + +A+ +KS+ + K +
Sbjct: 518 DVDVEDAPRKRLRTDKHSLRKQRETITDKTARTSSYKAIEAASSLKSQAAT-----KNLS 572
Query: 73 SSLQDITSQETKLVTESCNQVLSTTSTGNLS-SEETLSD--GDERTESSYAETSRTDNNS 129
+ + + + T S + +S+ + S +E +SD GDE +ES Y T +
Sbjct: 573 DACKPLKKRNRASATASSALGFNKSSSPSASLTENEVSDNPGDEPSESPYESADETQTEA 632
Query: 130 GDVSK 134
SK
Sbjct: 633 SVSSK 637
Score = 60 (26.2 bits), Expect = 2.5e-06, Sum P(3) = 2.5e-06
Identities = 16/50 (32%), Positives = 23/50 (46%)
Query: 605 DDRTVIYCDQ--CEKEFHVGCLRKNGLCDLKEIPKDKWFC----CDDCNR 648
D ++ CD+ C K +H+ CL L + P KW C CD C +
Sbjct: 1228 DGGQLVLCDRKFCTKAYHLSCL------GLGKRPFGKWECPWHHCDVCGK 1271
Score = 48 (22.0 bits), Expect = 7.5e-05, Sum P(4) = 7.5e-05
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 375 DTGREQTHMKEMLE-ERKRGVKRPFMHQKRTAEGGTKKRDND 415
D G E++ +M + E KRGV P +KR+ ++ R D
Sbjct: 395 DPGTEKSTPPKMADAEPKRGVGSP-AGRKRSTGSASRSRKGD 435
Score = 43 (20.2 bits), Expect = 7.5e-05, Sum P(4) = 7.5e-05
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 184 GSSGANDGVLCARNMEIKMSKKVVPNEYP 212
G GA+D LC E+K PN P
Sbjct: 69 GEPGAHDTKLCFETQEVK-GIGTPPNTTP 96
Score = 39 (18.8 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 17/68 (25%), Positives = 29/68 (42%)
Query: 3 ESAVCLEVPADGEMDVECSSRTESKQDRELLTDNVESDSFPNGKHAKEEALNDDIKSEVS 62
ES++C + AD E ++++K R +++ DS + E AL I S
Sbjct: 120 ESSICGDGAADMSQSEENGQKSDNKTRRNRKR-SIKYDSLLE-QGLVEAALVSKISSPED 177
Query: 63 NPVVSPKE 70
+ KE
Sbjct: 178 KKIPVKKE 185
Score = 38 (18.4 bits), Expect = 0.00022, Sum P(4) = 0.00022
Identities = 11/33 (33%), Positives = 20/33 (60%)
Query: 3 ESAVCLEV--PADGEMDVECSSRTESKQDRELL 33
E+A+ ++ P D ++ V+ S S +DR+LL
Sbjct: 165 EAALVSKISSPEDKKIPVKKESCPNSGRDRDLL 197
>MGI|MGI:1276574 [details] [associations]
symbol:Whsc1 "Wolf-Hirschhorn syndrome candidate 1 (human)"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0003149 "membranous septum morphogenesis" evidence=IMP]
[GO:0003289 "atrial septum primum morphogenesis" evidence=IMP]
[GO:0003290 "atrial septum secundum morphogenesis" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IDA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0018022 "peptidyl-lysine methylation" evidence=IDA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IDA]
[GO:0032259 "methylation" evidence=IEA] [GO:0034968 "histone lysine
methylation" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0060348 "bone development" evidence=IMP]
InterPro:IPR001841 Pfam:PF00856 InterPro:IPR009071
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280
PROSITE:PS51215 SMART:SM00184 SMART:SM00249 SMART:SM00317
SMART:SM00570 MGI:MGI:1276574 Pfam:PF00855 Pfam:PF00505
GO:GO:0005634 GO:GO:0005694 GO:GO:0005730 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0031965 GO:GO:0006351
GO:GO:0003682 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0003289 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0060348 eggNOG:COG2940
GO:GO:0018024 InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 GO:GO:0003149 GO:GO:0003290 KO:K11424
UniGene:Mm.332320 HSSP:Q9BYU8 CTD:7468 OMA:DVKRCVV ChiTaRS:WHSC1
EMBL:EU733655 EMBL:AK129287 EMBL:AC163329 EMBL:AK078622
EMBL:BC046473 EMBL:BC053454 IPI:IPI00107975 IPI:IPI00671804
IPI:IPI00762411 IPI:IPI00902751 RefSeq:NP_001074571.2
RefSeq:NP_780440.2 UniGene:Mm.19892 UniGene:Mm.490310
ProteinModelPortal:Q8BVE8 SMR:Q8BVE8 STRING:Q8BVE8
PhosphoSite:Q8BVE8 PaxDb:Q8BVE8 PRIDE:Q8BVE8
Ensembl:ENSMUST00000058096 Ensembl:ENSMUST00000066854
Ensembl:ENSMUST00000075812 GeneID:107823 KEGG:mmu:107823
UCSC:uc008xbm.2 UCSC:uc012duw.1 HOGENOM:HOG000230893
HOVERGEN:HBG079979 NextBio:359529 Bgee:Q8BVE8 CleanEx:MM_WHSC1
Genevestigator:Q8BVE8 GermOnline:ENSMUSG00000057406 Uniprot:Q8BVE8
Length = 1365
Score = 127 (49.8 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 23/55 (41%), Positives = 31/55 (56%)
Query: 499 GQRRTTGGSDDMCHVCGDGENLLLCNGCPLAFHAACLDPLLIPESGWRCPNCRQG 553
G+R T + C VC G +LL C CP AFH CL+ + +P+ W C +CR G
Sbjct: 822 GKRHHTHVNVSWCFVCSKGGSLLCCEACPAAFHPDCLN-IEMPDGSWFCNDCRAG 875
Score = 113 (44.8 bits), Expect = 0.00014, Sum P(4) = 0.00014
Identities = 33/103 (32%), Positives = 44/103 (42%)
Query: 457 NKEISPSQF--EAHAGMAARRQPYRHIYTSNGMTLHDIAISLAMGQRRTTGGSDDMCHVC 514
NK SPS E + +P Y S T + ++S +R + +C +C
Sbjct: 614 NKSSSPSASLTEHEVSDSPGDEPSESPYESADETQTEASVSSKKSERGMAAKKEYVCQLC 673
Query: 515 GDGENLLLCNG-CPLAFHAACLDPLLIPESGWRCPNCRQG-HS 555
+LLLC G C AFH ACL PE + C C G HS
Sbjct: 674 EKTGSLLLCEGPCCGAFHLACLGLSRRPEGRFTCTECASGIHS 716
Score = 64 (27.6 bits), Expect = 0.00014, Sum P(4) = 0.00014
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 608 TVIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFCCDDCN---RIHAALQDFV 657
+++ C+ C FH CL E+P WFC +DC ++H QD +
Sbjct: 842 SLLCCEACPAAFHPDCLNI-------EMPDGSWFC-NDCRAGKKLH--FQDII 884
Score = 62 (26.9 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 29/129 (22%), Positives = 56/129 (43%)
Query: 11 PADGEMDVECSSRTESKQDRELLT--DNVESDSFPNGKHAKEEALNDDIKSEVSNPVVSP 68
PA+ ++DVE + R + D+ L + + + + EA + +KS+ +
Sbjct: 535 PAE-DVDVEDAPRKRLRADKHSLRKRETITDKTARTSSYKAIEAASS-LKSQAAT----- 587
Query: 69 KEFTSSLQDITSQETKLVTESCNQVLSTTSTGNLS-SEETLSD--GDERTESSYAETSRT 125
K + + + + + T S + +S+ + S +E +SD GDE +ES Y T
Sbjct: 588 KNLSDACKPLKKRNRASATASSALGFNKSSSPSASLTEHEVSDSPGDEPSESPYESADET 647
Query: 126 DNNSGDVSK 134
+ SK
Sbjct: 648 QTEASVSSK 656
Score = 60 (26.2 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 16/50 (32%), Positives = 23/50 (46%)
Query: 605 DDRTVIYCDQ--CEKEFHVGCLRKNGLCDLKEIPKDKWFC----CDDCNR 648
D ++ CD+ C K +H+ CL L + P KW C CD C +
Sbjct: 1247 DGGQLVLCDRKFCTKAYHLSCL------GLGKRPFGKWECPWHHCDVCGK 1290
Score = 49 (22.3 bits), Expect = 1.3e-05, Sum P(4) = 1.3e-05
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 375 DTGREQTHMKEMLE-ERKRGVKRPFMHQKRTAEGG-TKKRDNDLHRLLF 421
D G +++ +M E E KRGV P +K T ++K D+ L+F
Sbjct: 415 DPGTDKSTPPKMAEAEPKRGVGSPAGRKKSTGSAPRSRKGDSAAQFLVF 463
Score = 49 (22.3 bits), Expect = 1.3e-05, Sum P(4) = 1.3e-05
Identities = 19/70 (27%), Positives = 27/70 (38%)
Query: 3 ESAVCLEVPADGEMDVECSSRTESKQDRELLTDNVESDSFPN--GKHAKEEALNDDIKSE 60
ES++C DG DV S E K D + + S + + + E AL I S
Sbjct: 140 ESSIC----GDGAADVSQSEENEQKSDNKTRRNRKRSIKYDSLLEQGLVEAALVSKISSP 195
Query: 61 VSNPVVSPKE 70
+ KE
Sbjct: 196 ADKKIPVKKE 205
Score = 41 (19.5 bits), Expect = 7.8e-05, Sum P(4) = 7.8e-05
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 184 GSSGANDGVLCARNMEIKMSKKVVPNEYP 212
G GA+D LC E+K PN P
Sbjct: 89 GEPGAHDTKLCFEAQEVK-GIGTPPNTTP 116
Score = 40 (19.1 bits), Expect = 9.7e-05, Sum P(4) = 9.7e-05
Identities = 11/33 (33%), Positives = 21/33 (63%)
Query: 3 ESAVCLEV--PADGEMDVECSSRTESKQDRELL 33
E+A+ ++ PAD ++ V+ S + +DR+LL
Sbjct: 185 EAALVSKISSPADKKIPVKKESCPNTGRDRDLL 217
>RGD|1583154 [details] [associations]
symbol:LOC686349 "similar to Wolf-Hirschhorn syndrome candidate
1 protein isoform 3" species:10116 "Rattus norvegicus" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0003149 "membranous septum
morphogenesis" evidence=IEA] [GO:0003289 "atrial septum primum
morphogenesis" evidence=IEA] [GO:0003290 "atrial septum secundum
morphogenesis" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0060348 "bone development"
evidence=IEA] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR009071
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 Pfam:PF00505 RGD:1583154
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0031965
GO:GO:0003682 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0003289 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0060348 GO:GO:0018024
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 GO:GO:0003149 GO:GO:0003290 IPI:IPI00779496
Ensembl:ENSRNOT00000021952 OrthoDB:EOG4V6ZFW ArrayExpress:D4A9J4
Uniprot:D4A9J4
Length = 1366
Score = 126 (49.4 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 23/55 (41%), Positives = 30/55 (54%)
Query: 499 GQRRTTGGSDDMCHVCGDGENLLLCNGCPLAFHAACLDPLLIPESGWRCPNCRQG 553
G+R T + C VC G +LL C CP AFH CL + +P+ W C +CR G
Sbjct: 823 GKRHHTHVNVSWCFVCSKGGSLLCCEACPAAFHPDCLS-IEMPDGSWFCNDCRAG 876
Score = 63 (27.2 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 27/125 (21%), Positives = 54/125 (43%)
Query: 15 EMDVECSSRTESKQDRELLTDNVESDSFPNGKHAKEEALN--DDIKSEVSNPVVSPKEFT 72
++DVE + R + D+ L E+ + + + +A+ +KS+ + K +
Sbjct: 538 DVDVEDAPRKRLRTDKHSLRKQRETITDKTARTSSYKAIEAASSLKSQAAT-----KNLS 592
Query: 73 SSLQDITSQETKLVTESCNQVLSTTSTGNLS-SEETLSD--GDERTESSYAETSRTDNNS 129
+ + + + T S + +S+ + S +E +SD GDE +ES Y T +
Sbjct: 593 DACKPLKKRNRASATASSALGFNKSSSPSASLTENEVSDNPGDEPSESPYESADETQTEA 652
Query: 130 GDVSK 134
SK
Sbjct: 653 SVSSK 657
Score = 60 (26.2 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 16/50 (32%), Positives = 23/50 (46%)
Query: 605 DDRTVIYCDQ--CEKEFHVGCLRKNGLCDLKEIPKDKWFC----CDDCNR 648
D ++ CD+ C K +H+ CL L + P KW C CD C +
Sbjct: 1248 DGGQLVLCDRKFCTKAYHLSCL------GLGKRPFGKWECPWHHCDVCGK 1291
Score = 48 (22.0 bits), Expect = 8.0e-05, Sum P(4) = 8.0e-05
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 375 DTGREQTHMKEMLE-ERKRGVKRPFMHQKRTAEGGTKKRDND 415
D G E++ +M + E KRGV P +KR+ ++ R D
Sbjct: 415 DPGTEKSTPPKMADAEPKRGVGSP-AGRKRSTGSASRSRKGD 455
Score = 43 (20.2 bits), Expect = 8.0e-05, Sum P(4) = 8.0e-05
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 184 GSSGANDGVLCARNMEIKMSKKVVPNEYP 212
G GA+D LC E+K PN P
Sbjct: 89 GEPGAHDTKLCFETQEVK-GIGTPPNTTP 116
Score = 39 (18.8 bits), Expect = 0.00019, Sum P(4) = 0.00019
Identities = 17/68 (25%), Positives = 29/68 (42%)
Query: 3 ESAVCLEVPADGEMDVECSSRTESKQDRELLTDNVESDSFPNGKHAKEEALNDDIKSEVS 62
ES++C + AD E ++++K R +++ DS + E AL I S
Sbjct: 140 ESSICGDGAADMSQSEENGQKSDNKTRRNRKR-SIKYDSLLE-QGLVEAALVSKISSPED 197
Query: 63 NPVVSPKE 70
+ KE
Sbjct: 198 KKIPVKKE 205
Score = 38 (18.4 bits), Expect = 0.00024, Sum P(4) = 0.00024
Identities = 11/33 (33%), Positives = 20/33 (60%)
Query: 3 ESAVCLEV--PADGEMDVECSSRTESKQDRELL 33
E+A+ ++ P D ++ V+ S S +DR+LL
Sbjct: 185 EAALVSKISSPEDKKIPVKKESCPNSGRDRDLL 217
>UNIPROTKB|E9PG89 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0006333 "chromatin assembly or
disassembly" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IDA] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005730 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 GO:GO:0045111
GO:GO:0006333 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1107 RefSeq:NP_001005271.2 UniGene:Hs.25601 GeneID:1107
KEGG:hsa:1107 HGNC:HGNC:1918 KO:K11642 ChiTaRS:CHD3 GenomeRNAi:1107
NextBio:4590 EMBL:AC104581 IPI:IPI00465222
ProteinModelPortal:E9PG89 SMR:E9PG89 PRIDE:E9PG89
Ensembl:ENST00000380358 UCSC:uc002gjd.2 OMA:EPEPGYR
ArrayExpress:E9PG89 Bgee:E9PG89 Uniprot:E9PG89
Length = 2059
Score = 168 (64.2 bits), Expect = 2.8e-06, Sum P(3) = 2.8e-06
Identities = 41/136 (30%), Positives = 59/136 (43%)
Query: 509 DMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQGHSSSMSRSVDLKG 566
D C VC G ++LC+ CP A+H CLDP L PE W CP+C + ++ + +
Sbjct: 439 DYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQWEAKEEEEE- 497
Query: 567 GLEAPGAEVGGCVICRLSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRK 626
E G E G E+ + CR D ++ CD C +H+ CL
Sbjct: 498 -YEEEGEEEGE------KEEEDDHMEYCR------VCKDGGELLCCDACISSYHIHCLNP 544
Query: 627 NGLCDLKEIPKDKWFC 642
L +IP +W C
Sbjct: 545 ----PLPDIPNGEWLC 556
Score = 47 (21.6 bits), Expect = 2.8e-06, Sum P(3) = 2.8e-06
Identities = 15/57 (26%), Positives = 27/57 (47%)
Query: 376 TGREQTHMKEMLEERKRGVKRPFMHQKRTAEGGTKKRDNDLHRLLFLPNGLPDGERL 432
TG + ++ E++++ KR +K +GG K+ + L L GL D E +
Sbjct: 156 TGPGRKRRRKHREKKEKKTKR---RKKGEGDGGQKQVEQKSSATLLLTWGLEDVEHV 209
Score = 38 (18.4 bits), Expect = 2.8e-06, Sum P(3) = 2.8e-06
Identities = 7/29 (24%), Positives = 14/29 (48%)
Query: 23 RTESKQDRELLTDNVESDSFPNGKHAKEE 51
R E +++ E++ E + G +EE
Sbjct: 6 RDEEEEEEEMVVSEEEEEEEEEGDEEEEE 34
>RGD|1311139 [details] [associations]
symbol:Aire "autoimmune regulator" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005622 "intracellular"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0005886 "plasma membrane"
evidence=IEA;ISO] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0006959 "humoral immune response"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA;ISO] [GO:0015629 "actin
cytoskeleton" evidence=IEA;ISO] [GO:0042393 "histone binding"
evidence=IEA;ISO] [GO:0042802 "identical protein binding"
evidence=IEA;ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0045182 "translation regulator
activity" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000770 InterPro:IPR001965 InterPro:IPR004865
InterPro:IPR008087 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342
Pfam:PF03172 PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864
PROSITE:PS51414 SMART:SM00249 SMART:SM00258 RGD:1311139
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0006417
GO:GO:0046872 GO:GO:0015629 GO:GO:0008270 GO:GO:0045944
GO:GO:0003682 GO:GO:0045182 GO:GO:0044212 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 OMA:NDDECAV OrthoDB:EOG4VX25M
GO:GO:0006959 Gene3D:3.10.390.10 InterPro:IPR010919 SUPFAM:SSF63763
GeneTree:ENSGT00440000034278 IPI:IPI00360526
Ensembl:ENSRNOT00000001611 UCSC:RGD:1311139 Uniprot:D3ZV49
Length = 551
Score = 153 (58.9 bits), Expect = 3.3e-06, Sum P(3) = 3.3e-06
Identities = 46/129 (35%), Positives = 61/129 (47%)
Query: 507 SDDMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQGH-SSSMSRSVD 563
++D C VC DG L+ C+GCP AFH ACL P L IP WRC C QG ++S+ +
Sbjct: 297 NEDECAVCHDGGELICCDGCPRAFHLACLSPPLQEIPSGLWRCSCCLQGRIQQNLSQPEE 356
Query: 564 LKGGLEAPGAEVGGCVICRLSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEFHVGC 623
+ LE P AE + R S SE + S + A + D V Y +
Sbjct: 357 SRP-LE-PSAETPILLGLR-SASEKTRVL---SRELPAGS--DAAVTYANLLAPPSTAPV 408
Query: 624 LRKNGLCDL 632
L + LC L
Sbjct: 409 LEPSALCPL 417
Score = 41 (19.5 bits), Expect = 3.3e-06, Sum P(3) = 3.3e-06
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 184 GSSGANDGVLCARNMEIKMSKKVV 207
GS GA +G+L + E SKK +
Sbjct: 202 GSRGAVEGILIQQVFESGGSKKCI 225
Score = 38 (18.4 bits), Expect = 3.3e-06, Sum P(3) = 3.3e-06
Identities = 10/32 (31%), Positives = 13/32 (40%)
Query: 108 LSDGDERTESSYAETSRTDNNSGDVSKSHVVL 139
L+D D E + ET R G H +L
Sbjct: 33 LADHDVVPEDKFQETLRLKEKEGCPQAFHALL 64
>ZFIN|ZDB-GENE-091204-206 [details] [associations]
symbol:si:dkey-21n12.3 "si:dkey-21n12.3"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 SMART:SM00384 ZFIN:ZDB-GENE-091204-206 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR018501 PROSITE:PS50827 EMBL:AL929053
GeneTree:ENSGT00530000064411 IPI:IPI00497346
Ensembl:ENSDART00000077161 Bgee:F1Q6Y6 Uniprot:F1Q6Y6
Length = 1369
Score = 112 (44.5 bits), Expect = 3.4e-06, Sum P(4) = 3.4e-06
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 507 SDDMCHVCG---DGENLLLCNGCPLAFHAACLDP--LLIPESGWRCPNCR 551
+DD C CG E +LLC+ C +H ACL P ++IP+ W CP C+
Sbjct: 852 NDDPCKHCGLPNHPELILLCDSCDSGYHTACLRPPLMIIPDGEWFCPPCQ 901
Score = 81 (33.6 bits), Expect = 3.4e-06, Sum P(4) = 3.4e-06
Identities = 41/155 (26%), Positives = 70/155 (45%)
Query: 14 GEMDVECSSRTESKQDRELLTDNVESDSFPNGKHAKEEALND----DIKSEVSNPVVSPK 69
GE ++ + ESK+ E L D + S K +KEE+L D + K E+ S +
Sbjct: 414 GESLLKDAPSKESKE--ESLKD---APSKEESKESKEESLKDNPSKESKEEILKDTPSKE 468
Query: 70 EFTSSLQDITSQETKLVTESCNQVLSTTSTGNLSSEETLSDGDERTESSYAETSRT-DNN 128
SL+D S+E+K ES S S +L E S + + E++++ D+
Sbjct: 469 SKQESLKDTPSKESK--GESLKDAPSKESKESLLKESKESKEESLKDPPGKESAKSKDDK 526
Query: 129 SGDVSKSHVVLEIPKHVSSSSGIRKITFKFSKRKE 163
+ +SK + +I S+ S ++ K +KE
Sbjct: 527 TKALSKKESLEDISNEKSAKS-LKDDATKDPSKKE 560
Score = 80 (33.2 bits), Expect = 4.3e-06, Sum P(4) = 4.3e-06
Identities = 38/127 (29%), Positives = 59/127 (46%)
Query: 25 ESKQDRELLTDNVES-DSFPNGKHAKEEALNDDIKSEVSNPVVSPKEFTSSLQDITSQET 83
+SK D+ ES + N K AK +L DD + P S KE SLQDI+++ T
Sbjct: 521 KSKDDKTKALSKKESLEDISNEKSAK--SLKDDATKD---P--SKKE---SLQDISNEST 570
Query: 84 KLVT--ESCNQVLSTTSTGNLSSEETLSDGDERTESSYAETSRTDNN--SGDVSKSHVVL 139
K V+ ++ + S+ +L+SEE+ D + S+ N S D++K
Sbjct: 571 KSVSKDDAAQDHFNKESSKDLASEESGKDQPAKDLSNEESIKNPPNQKPSKDLAKKESQK 630
Query: 140 EIPKHVS 146
IP+ S
Sbjct: 631 VIPESES 637
Score = 78 (32.5 bits), Expect = 6.6e-06, Sum P(4) = 6.6e-06
Identities = 36/121 (29%), Positives = 54/121 (44%)
Query: 54 NDDIKSEVSNPVVSPKEFTSSLQDITSQETKLVT-----ESCNQVLSTTSTGNLSSEETL 108
N +K E + P KE SL+D S+E+K + ES + L + S EE+L
Sbjct: 375 NAPVK-ESNIPNKESKE--DSLKDAQSKESKGESLKGSKESKGESLLKDAPSKESKEESL 431
Query: 109 SDGDERTESSYA-ETSRTDNNSGDVSKSHVVLEIPKHVSSSSGIRKITFKFSKRKEDYVA 167
D + ES + E S DN S + SK ++ + P S ++ K SK + A
Sbjct: 432 KDAPSKEESKESKEESLKDNPSKE-SKEEILKDTPSKESKQESLKDTPSKESKGESLKDA 490
Query: 168 P 168
P
Sbjct: 491 P 491
Score = 67 (28.6 bits), Expect = 0.00089, Sum P(3) = 0.00088
Identities = 26/101 (25%), Positives = 41/101 (40%)
Query: 15 EMDVECSSRTESKQDRELLTDNVES-DSFPNGKHAKEEALNDD---IKSEVSNPVVSPKE 70
E + +S K N ES + PN K +K+ A + I S VVS KE
Sbjct: 586 ESSKDLASEESGKDQPAKDLSNEESIKNPPNQKPSKDLAKKESQKVIPESESQKVVSEKE 645
Query: 71 FTSSLQDITSQETKLVTESCNQVLSTTSTGNLSSEETLSDG 111
+ ++ T + K + + S S + +SEE + G
Sbjct: 646 IPKTAEETTKESVKEANATVDNCTSKQSERDATSEEREASG 686
Score = 54 (24.1 bits), Expect = 3.4e-06, Sum P(4) = 3.4e-06
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 368 TSCSFVQDTGREQTHMKEMLEERKRGVKRPFMHQKRTAEGGTKKR 412
TS +D E+ +++E+ +G+K+P K++ E K +
Sbjct: 669 TSKQSERDATSEEREASGVVQEKGKGIKKPGRPSKKSTESQNKDK 713
Score = 45 (20.9 bits), Expect = 3.4e-06, Sum P(4) = 3.4e-06
Identities = 15/54 (27%), Positives = 29/54 (53%)
Query: 799 ERLL-CSLNVENLVLPAA---------EKAESIWTKKFGFRKMSRERLLKYQRD 842
ERL+ ++VEN++ P+ +KAE+ +K +G R ++ + Y+ D
Sbjct: 931 ERLVYVGISVENIITPSINYYSEFQENDKAETKKSKGWGRRSTRAKKYISYRFD 984
>UNIPROTKB|F1PPM4 [details] [associations]
symbol:AIRE "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045182 "translation regulator activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000770
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR008087
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414
SMART:SM00249 SMART:SM00258 GO:GO:0005634 GO:GO:0005737
GO:GO:0006417 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0045182 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 OMA:NDDECAV GO:GO:0006959 Gene3D:3.10.390.10
InterPro:IPR010919 SUPFAM:SSF63763 GeneTree:ENSGT00440000034278
EMBL:AAEX03016632 Ensembl:ENSCAFT00000017065 Uniprot:F1PPM4
Length = 547
Score = 154 (59.3 bits), Expect = 3.9e-06, Sum P(4) = 3.9e-06
Identities = 27/51 (52%), Positives = 33/51 (64%)
Query: 507 SDDMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQGHS 555
++D C VC DG L+ C+GCP AFH ACL P L IP WRC +C QG +
Sbjct: 295 NEDECAVCRDGGELICCDGCPRAFHLACLSPPLHDIPSGTWRCSSCLQGRA 345
Score = 39 (18.8 bits), Expect = 3.9e-06, Sum P(4) = 3.9e-06
Identities = 7/19 (36%), Positives = 8/19 (42%)
Query: 605 DDRTVIYCDQCEKEFHVGC 623
D V+ C C FH C
Sbjct: 437 DGSDVLRCTHCAAAFHWRC 455
Score = 38 (18.4 bits), Expect = 3.9e-06, Sum P(4) = 3.9e-06
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 184 GSSGANDGVLCARNMEIKMSKKVV 207
G+ GA +G+L + E SKK +
Sbjct: 201 GACGALEGILIQQVFESGGSKKCI 224
Score = 38 (18.4 bits), Expect = 3.9e-06, Sum P(4) = 3.9e-06
Identities = 10/32 (31%), Positives = 13/32 (40%)
Query: 108 LSDGDERTESSYAETSRTDNNSGDVSKSHVVL 139
L+D D E + ET R G H +L
Sbjct: 33 LADHDVVPEDKFQETLRLKEKEGCPQAFHALL 64
>UNIPROTKB|E1BIC4 [details] [associations]
symbol:AIRE "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006959 "humoral
immune response" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0045182 "translation regulator activity"
evidence=IEA] InterPro:IPR000770 InterPro:IPR001965
InterPro:IPR004865 InterPro:IPR008087 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01342 Pfam:PF03172 PRINTS:PR01711
PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414 SMART:SM00249
SMART:SM00258 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
GO:GO:0006417 GO:GO:0046872 GO:GO:0015629 GO:GO:0008270
GO:GO:0045944 GO:GO:0003682 GO:GO:0045182 GO:GO:0044212
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 OMA:NDDECAV
GO:GO:0006959 Gene3D:3.10.390.10 InterPro:IPR010919 SUPFAM:SSF63763
GeneTree:ENSGT00440000034278 EMBL:DAAA02003438 EMBL:DAAA02003439
IPI:IPI00693894 Ensembl:ENSBTAT00000031852 Uniprot:E1BIC4
Length = 561
Score = 154 (59.3 bits), Expect = 5.6e-06, Sum P(3) = 5.6e-06
Identities = 28/49 (57%), Positives = 31/49 (63%)
Query: 507 SDDMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQG 553
++D C C DG LL C+GCP AFH ACL P L IP WRC NC QG
Sbjct: 303 NEDECAACRDGGELLCCDGCPRAFHLACLTPPLSEIPSGTWRCSNCVQG 351
Score = 38 (18.4 bits), Expect = 5.6e-06, Sum P(3) = 5.6e-06
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 184 GSSGANDGVLCARNMEIKMSKKVV 207
G+ GA +G+L + E SKK +
Sbjct: 210 GARGAVEGILIQQVFESGGSKKCI 233
Score = 38 (18.4 bits), Expect = 5.6e-06, Sum P(3) = 5.6e-06
Identities = 10/32 (31%), Positives = 13/32 (40%)
Query: 108 LSDGDERTESSYAETSRTDNNSGDVSKSHVVL 139
L+D D E + ET R G H +L
Sbjct: 38 LADHDVVPEEKFQETLRLKEKEGCPQAFHALL 69
>RGD|1582725 [details] [associations]
symbol:Chd5 "chromodomain helicase DNA binding protein 5"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1582725 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OrthoDB:EOG4WH8JX
IPI:IPI00948282 Ensembl:ENSRNOT00000067364 UCSC:RGD:1582725
ArrayExpress:D4A5U0 Uniprot:D4A5U0
Length = 1940
Score = 152 (58.6 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 37/118 (31%), Positives = 51/118 (43%)
Query: 509 DMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQGHSSSMSRSVDLKG 566
D C VC G ++LC+ CP A+H CLDP L PE W CP+C + + D +
Sbjct: 342 DYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKDDDEE- 400
Query: 567 GLEAPGAEVGGCVICRLSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEFHVGCL 624
E GGC E+ + CR D ++ CD C +H+ CL
Sbjct: 401 ------EEEGGC-----EEEEDDHMEFCR------VCKDGGELLCCDACPSSYHLHCL 441
Score = 49 (22.3 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 25/102 (24%), Positives = 41/102 (40%)
Query: 24 TESKQDRELLTDNVESDS-FPNGKHAKEEALNDDIKSEVSNPVVSPKEFTSSLQDITSQE 82
TE + R L + +E++ + E D +E PV PK+ L++ S+
Sbjct: 7 TEEELPR-LFAEEMENEEEMSEEEDGGLEGFEDFFPAE---PVSLPKKKPKKLKESKSKG 62
Query: 83 TKLVTESCNQVLSTTSTGNLSSEETLSDGDERTESSYAETSR 124
+ E N LS +EE L + E S Y+ T +
Sbjct: 63 KRKKKEGSNDELS-------ENEEDLEEKSESEGSDYSPTKK 97
Score = 43 (20.2 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 14/49 (28%), Positives = 22/49 (44%)
Query: 40 DSFPNGKHAKEEALNDDIKSEVSNPVVSPKEFTSSLQDITSQETKLVTE 88
+S GK K+E ND++ SE + E S T ++ K + E
Sbjct: 57 ESKSKGKRKKKEGSNDEL-SENEEDLEEKSESEGSDYSPTKKKKKKLKE 104
Score = 39 (18.8 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 19/78 (24%), Positives = 32/78 (41%)
Query: 347 PSLPHSIISCSSLALEESISPTSCSFVQDTGREQTHMKEMLEERKRGV---------KRP 397
P+ P S+ L+ES S + + E + +E LEE+ K+
Sbjct: 41 PAEPVSLPKKKPKKLKESKSKGKRKKKEGSNDELSENEEDLEEKSESEGSDYSPTKKKKK 100
Query: 398 FMHQKRTAEGGTKKRDND 415
+ +K+ + KKRD D
Sbjct: 101 KLKEKKEKKAKRKKRDED 118
>FB|FBgn0262519 [details] [associations]
symbol:Mi-2 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=IDA;NAS] [GO:0005634
"nucleus" evidence=ISS;IDA;NAS] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0016581 "NuRD complex" evidence=ISS;TAS]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS;IDA] [GO:0003678 "DNA
helicase activity" evidence=ISS] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007517 "muscle
organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0031491 "nucleosome binding"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0070615
"nucleosome-dependent ATPase activity" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 EMBL:AE014296 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0000122
GO:GO:0048813 GO:GO:0007517 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005700 GO:GO:0042766 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
EMBL:AF119716 EMBL:AY113368 RefSeq:NP_001163476.1
RefSeq:NP_649154.2 UniGene:Dm.28317 ProteinModelPortal:O97159
SMR:O97159 DIP:DIP-22862N IntAct:O97159 MINT:MINT-864813
STRING:O97159 PaxDb:O97159 EnsemblMetazoa:FBtr0074919
EnsemblMetazoa:FBtr0302046 GeneID:40170 KEGG:dme:Dmel_CG8103
CTD:40170 FlyBase:FBgn0262519 InParanoid:O97159 OrthoDB:EOG4T76J4
ChiTaRS:Mi-2 GenomeRNAi:40170 NextBio:817384 Bgee:O97159
GermOnline:CG8103 Uniprot:O97159
Length = 1982
Score = 147 (56.8 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 49/162 (30%), Positives = 67/162 (41%)
Query: 393 GVKRPFMHQKRTAEGGTK-KRDNDLHRLLFLPNGLPDGERLTYIVKGQRLRFGCKQGNGI 451
G P + +K + G K K+ N L + P G DGE + Q C+QG I
Sbjct: 336 GSGAPVVRKKAKTKIGNKFKKKNKLKKTKNFPEG-EDGEH-----EHQDYCEVCQQGGEI 389
Query: 452 V-CDCCNKEISPSQFEAHAGMAARRQPYRHIYTSNGMTLHDIAISLAMGQRRTTGGSDDM 510
+ CD C P + +P ++ H A A + +
Sbjct: 390 ILCDTC-----PRAYHLVCLEPELDEPPEGKWSCP----HCEADGGA-AEEEDDDEHQEF 439
Query: 511 CHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNC 550
C VC DG LL C+ CP A+H CL+P L IP+ WRCP C
Sbjct: 440 CRVCKDGGELLCCDSCPSAYHTFCLNPPLDTIPDGDWRCPRC 481
>UNIPROTKB|H0Y9U6 [details] [associations]
symbol:WHSC1 "Histone-lysine N-methyltransferase NSD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 Pfam:PF00855 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR000313
PROSITE:PS50812 SMART:SM00293 EMBL:AL132868 EMBL:AC105448
HGNC:HGNC:12766 ChiTaRS:WHSC1 Ensembl:ENST00000514329
Uniprot:H0Y9U6
Length = 284
Score = 135 (52.6 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 53/207 (25%), Positives = 81/207 (39%)
Query: 457 NKEISPSQF--EAHAGMAARRQPYRHIYTSNGMTLHDIAISLAMGQRRTTGGSDDMCHVC 514
+K SPS E + +P Y S T ++++S +R T + +C +C
Sbjct: 27 SKSSSPSASLTENEVSDSPGDEPSESPYESADETQTEVSVSSKKSERGVTAKKEYVCQLC 86
Query: 515 GDGENLLLCNG-CPLAFHAACLDPLLIPESGWRCPNCRQGHSSSMSRSVDLKGGLEAPGA 573
+LLLC G C AFH ACL PE + C C G S S S+ A
Sbjct: 87 EKPGSLLLCEGPCCGAFHLACLGLSRRPEGRFTCSECASGCSVIASNSIICTAHFTARKG 146
Query: 574 EVGGCVICRLSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLCDLK 633
+ + ++ C F + +++ C+ C FH CL
Sbjct: 147 K---------RHHAHVNVSWC----FVCSK--GGSLLCCESCPAAFHPDCLNI------- 184
Query: 634 EIPKDKWFCCDDCN---RIHAALQDFV 657
E+P WFC +DC ++H QD +
Sbjct: 185 EMPDGSWFC-NDCRAGKKLH--FQDII 208
>UNIPROTKB|F1N9E9 [details] [associations]
symbol:Gga.18314 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 EMBL:AADN02028734 EMBL:AADN02028735 EMBL:AADN02028736
EMBL:AADN02028737 EMBL:AADN02028738 EMBL:AADN02028739
EMBL:AADN02028740 EMBL:AADN02028741 EMBL:AADN02028742
EMBL:AADN02028743 EMBL:AADN02070525 IPI:IPI00597924
Ensembl:ENSGALT00000004685 ArrayExpress:F1N9E9 Uniprot:F1N9E9
Length = 2114
Score = 128 (50.1 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 23/57 (40%), Positives = 31/57 (54%)
Query: 511 CHVCGDGENLLLCNGCPLAFHAACLDPLLIPESGWRCPNCRQGHSSSMSRSVDLKGG 567
C VC +G +LL C CP AFH CL+ + +PE W C +C+ G V +K G
Sbjct: 1314 CFVCSEGGSLLCCESCPAAFHRECLN-IEMPEGSWYCNDCKAGKKPHYKEVVWVKVG 1369
Score = 67 (28.6 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 29/129 (22%), Positives = 61/129 (47%)
Query: 45 GKHAKEEALNDDIKSEVSNPVVSPKEFTSSLQDITSQETKLVTESCNQVLSTTSTGNLSS 104
G H K +AL + ++ ++ + +E SSL + S + ++ + + T + SS
Sbjct: 175 GSH-KSDALKNTLQGDLFSNASLERE-KSSLGILCSSKLQIHYSASEAGVEKKQTESDSS 232
Query: 105 EETLSDGDERTESSYAETSRTDNNSGDVSKSHVVLEIPKHVSSSSGIRKITFKFSKRKED 164
+LSDG + ++S +++ +VS S +E ++SS I K++ FS++
Sbjct: 233 S-SLSDGGNSDVDTMDQSSERASSTLEVSDSSDKMEKEFPMTSSGNI-KLSMYFSQKSSR 290
Query: 165 YVAPLAYEE 173
+Y +
Sbjct: 291 RARKKSYRD 299
Score = 54 (24.1 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 15/50 (30%), Positives = 22/50 (44%)
Query: 605 DDRTVIYCDQ--CEKEFHVGCLRKNGLCDLKEIPKDKWFC----CDDCNR 648
D ++ C + C K +H CL +L + P KW C CD C +
Sbjct: 1733 DGGQLVSCKKAGCPKVYHADCL------NLTKRPAGKWECPWHQCDMCGK 1776
>UNIPROTKB|F1LPP8 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR000953 InterPro:IPR001965
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00628 Pfam:PF08073
PROSITE:PS50013 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
SMART:SM00298 Pfam:PF00385 RGD:1311923 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
GeneTree:ENSGT00560000076896 GO:GO:0016818 IPI:IPI00779114
Ensembl:ENSRNOT00000057058 ArrayExpress:F1LPP8 Uniprot:F1LPP8
Length = 710
Score = 143 (55.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 36/118 (30%), Positives = 51/118 (43%)
Query: 509 DMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQGHSSSMSRSVDLKG 566
D C VC G ++LC+ CP A+H CLDP L PE W CP+C + + + +
Sbjct: 394 DYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEK--EGVQWEAKEEEE 451
Query: 567 GLEAPGAEVGGCVICRLSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEFHVGCL 624
E G E G E+ + CR D ++ CD C +H+ CL
Sbjct: 452 DYEEEGEE-GE------KEEEDDHMEYCR------VCKDGGELLCCDACISSYHIHCL 496
Score = 46 (21.3 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 15/57 (26%), Positives = 27/57 (47%)
Query: 376 TGREQTHMKEMLEERKRGVKRPFMHQKRTAEGGTKKRDNDLHRLLFLPNGLPDGERL 432
TG + ++ E+R++ KR ++ +GG K+ + L L GL D E +
Sbjct: 110 TGPGRKRRRKHREKREKKTKR---RKRGEGDGGHKQVEQKSSATLLLTWGLEDVEHV 163
>ZFIN|ZDB-GENE-030131-2581 [details] [associations]
symbol:whsc1 "Wolf-Hirschhorn syndrome candidate
1" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0018024 "histone-lysine N-methyltransferase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0051216 "cartilage development" evidence=IMP] [GO:0010452
"histone H3-K36 methylation" evidence=IMP] [GO:0048706 "embryonic
skeletal system development" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0032259 "methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 ZFIN:ZDB-GENE-030131-2581
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 GO:GO:0051216
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
GO:GO:0048706 SMART:SM00293 EMBL:CR556722 KO:K11424 GO:GO:0010452
CTD:7468 EMBL:CT573111 IPI:IPI00492725 RefSeq:NP_001076020.1
UniGene:Dr.78031 Ensembl:ENSDART00000009499 GeneID:100000709
KEGG:dre:100000709 HOVERGEN:HBG106834 OMA:FESECLN NextBio:20784754
Uniprot:B8JIA4
Length = 1461
Score = 121 (47.7 bits), Expect = 1.1e-05, Sum P(5) = 1.1e-05
Identities = 19/43 (44%), Positives = 25/43 (58%)
Query: 511 CHVCGDGENLLLCNGCPLAFHAACLDPLLIPESGWRCPNCRQG 553
C +C G LL C CP AFH CL+ + +P+ W C +CR G
Sbjct: 926 CFICSKGGRLLCCESCPAAFHPDCLN-IAMPDGSWFCNDCRSG 967
Score = 65 (27.9 bits), Expect = 1.1e-05, Sum P(5) = 1.1e-05
Identities = 20/71 (28%), Positives = 29/71 (40%)
Query: 595 RSHDFSAATFDDRTVIYCDQ--CEKEFHVGCLRKNGLCDLKEIPKDKWFC----CDDCNR 648
+S D D ++ CD+ C K +H+ CL D + P +W C CD C +
Sbjct: 1325 KSEDECFRCGDGGQLVLCDKKGCTKAYHLSCL------DRTKRPFGRWDCPWHHCDVCGK 1378
Query: 649 IHAALQDFVSN 659
AA N
Sbjct: 1379 NSAAFCQLCPN 1389
Score = 53 (23.7 bits), Expect = 1.1e-05, Sum P(5) = 1.1e-05
Identities = 22/91 (24%), Positives = 37/91 (40%)
Query: 59 SEVSNPVVSPKEFTSSLQDITSQETKLVTESCNQV---LSTTSTGNLSSEETLSDGDERT 115
S +P++ P T + DIT + L ES + T T E+ LSD +E
Sbjct: 198 SSDQSPLLHP---TINSNDITIEPCGLPVESIEHTHGDMPTCVTA-FPDEQPLSDCEETV 253
Query: 116 ESSYAETSRTDNNSGDVSKSHVVLEIPKHVS 146
++ + + DV +S+ + H S
Sbjct: 254 DAQGVDETDDAQGENDVKESYTETQSNVHFS 284
Score = 48 (22.0 bits), Expect = 1.1e-05, Sum P(5) = 1.1e-05
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 359 LALEESISPTSCSFVQDTGREQT--HMKEMLEE-RKRGVK 395
L EE ++ SFV + G+ Q HM ++LEE R +G++
Sbjct: 394 LLTEERLA--KFSFVYEDGKAQLNPHMLQVLEEQRNQGLQ 431
Score = 48 (22.0 bits), Expect = 0.00017, Sum P(4) = 0.00017
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 117 SSYAETSRTDNNSGDVSKSH 136
SSYAE R D+ S +SH
Sbjct: 726 SSYAEPERPDSPSDSTDESH 745
Score = 41 (19.5 bits), Expect = 1.1e-05, Sum P(5) = 1.1e-05
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 438 GQRLRFGCKQGNGIVCDCC 456
G + F CK+ G V CC
Sbjct: 805 GVHVCFTCKKSEGEVRRCC 823
>UNIPROTKB|F1N972 [details] [associations]
symbol:Gga.18314 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0001702 "gastrulation with mouth forming second" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003712
"transcription cofactor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0050681 "androgen
receptor binding" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280
PROSITE:PS51215 SMART:SM00184 SMART:SM00249 SMART:SM00317
SMART:SM00570 Pfam:PF00855 GO:GO:0005634 GO:GO:0045893
GO:GO:0046872 GO:GO:0008270 GO:GO:0003682 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0003712
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 EMBL:AADN02028734 EMBL:AADN02028735 EMBL:AADN02028736
EMBL:AADN02028737 EMBL:AADN02028738 EMBL:AADN02028739
EMBL:AADN02028740 EMBL:AADN02028741 EMBL:AADN02028742
EMBL:AADN02028743 EMBL:AADN02070525 IPI:IPI00581947
Ensembl:ENSGALT00000004699 OMA:KYYHEEC ArrayExpress:F1N972
Uniprot:F1N972
Length = 2205
Score = 128 (50.1 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 23/57 (40%), Positives = 31/57 (54%)
Query: 511 CHVCGDGENLLLCNGCPLAFHAACLDPLLIPESGWRCPNCRQGHSSSMSRSVDLKGG 567
C VC +G +LL C CP AFH CL+ + +PE W C +C+ G V +K G
Sbjct: 1421 CFVCSEGGSLLCCESCPAAFHRECLN-IEMPEGSWYCNDCKAGKKPHYKEVVWVKVG 1476
Score = 67 (28.6 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 29/129 (22%), Positives = 61/129 (47%)
Query: 45 GKHAKEEALNDDIKSEVSNPVVSPKEFTSSLQDITSQETKLVTESCNQVLSTTSTGNLSS 104
G H K +AL + ++ ++ + +E SSL + S + ++ + + T + SS
Sbjct: 280 GSH-KSDALKNTLQGDLFSNASLERE-KSSLGILCSSKLQIHYSASEAGVEKKQTESDSS 337
Query: 105 EETLSDGDERTESSYAETSRTDNNSGDVSKSHVVLEIPKHVSSSSGIRKITFKFSKRKED 164
+LSDG + ++S +++ +VS S +E ++SS I K++ FS++
Sbjct: 338 S-SLSDGGNSDVDTMDQSSERASSTLEVSDSSDKMEKEFPMTSSGNI-KLSMYFSQKSSR 395
Query: 165 YVAPLAYEE 173
+Y +
Sbjct: 396 RARKKSYRD 404
Score = 54 (24.1 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 15/50 (30%), Positives = 22/50 (44%)
Query: 605 DDRTVIYCDQ--CEKEFHVGCLRKNGLCDLKEIPKDKWFC----CDDCNR 648
D ++ C + C K +H CL +L + P KW C CD C +
Sbjct: 1840 DGGQLVSCKKAGCPKVYHADCL------NLTKRPAGKWECPWHQCDMCGK 1883
>UNIPROTKB|F2Z2R5 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AL031847
GO:GO:0008026 InterPro:IPR023780 EMBL:AL035406 HGNC:HGNC:16816
ChiTaRS:CHD5 IPI:IPI00444866 ProteinModelPortal:F2Z2R5 SMR:F2Z2R5
Ensembl:ENST00000496404 ArrayExpress:F2Z2R5 Bgee:F2Z2R5
Uniprot:F2Z2R5
Length = 1225
Score = 152 (58.6 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 36/118 (30%), Positives = 51/118 (43%)
Query: 509 DMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQGHSSSMSRSVDLKG 566
D C VC G ++LC+ CP A+H CLDP L PE W CP+C + + +
Sbjct: 344 DYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEK-------EGIQWEP 396
Query: 567 GLEAPGAEVGGCVICRLSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEFHVGCL 624
+ E GGC E+ + CR D ++ CD C +H+ CL
Sbjct: 397 KDDDDEEEEGGC-----EEEEDDHMEFCR------VCKDGGELLCCDACPSSYHLHCL 443
Score = 41 (19.5 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 24 TESKQDRELLTDNVESDSFPNGKHAKEEALND 55
+E+++D E +++ SD PN K K++ L D
Sbjct: 76 SENEEDLEEKSESEGSDYSPNKK--KKKKLKD 105
>MGI|MGI:1338803 [details] [associations]
symbol:Aire "autoimmune regulator (autoimmune
polyendocrinopathy candidiasis ectodermal dystrophy)" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0005622 "intracellular"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006959 "humoral
immune response" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0045182 "translation regulator activity" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP;IDA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000770 InterPro:IPR001965 InterPro:IPR004865
InterPro:IPR008087 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342
Pfam:PF03172 PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864
PROSITE:PS51414 SMART:SM00184 SMART:SM00249 SMART:SM00258
MGI:MGI:1338803 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
GO:GO:0006417 GO:GO:0046872 GO:GO:0015629 GO:GO:0008270
GO:GO:0045944 GO:GO:0006351 GO:GO:0003682 GO:GO:0045182
GO:GO:0044212 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 CTD:326 eggNOG:NOG317492 HOVERGEN:HBG014961
KO:K10603 OMA:NDDECAV GO:GO:0042393 GO:GO:0006959
Gene3D:3.10.390.10 InterPro:IPR010919 SUPFAM:SSF63763 EMBL:AF105002
EMBL:AF128772 EMBL:AF128773 EMBL:AJ007715 EMBL:AF079536
EMBL:AJ132243 EMBL:AF128115 EMBL:AF128116 EMBL:AF128117
EMBL:AF128118 EMBL:AF128119 EMBL:AF128120 EMBL:AF128121
EMBL:AF128122 EMBL:AF128123 EMBL:AF128124 EMBL:AF128125
EMBL:AJ243821 IPI:IPI00129025 IPI:IPI00223523 IPI:IPI00223524
IPI:IPI00223525 IPI:IPI00230215 IPI:IPI00230216 IPI:IPI00230217
IPI:IPI00230218 IPI:IPI00230219 IPI:IPI00230220 IPI:IPI00230221
IPI:IPI00400171 RefSeq:NP_001258478.1 RefSeq:NP_001258479.1
RefSeq:NP_001258480.1 RefSeq:NP_001258481.1 RefSeq:NP_001258482.1
RefSeq:NP_001258483.1 RefSeq:NP_001258484.1 RefSeq:NP_001258485.1
RefSeq:NP_001258486.1 RefSeq:NP_001258487.1 RefSeq:NP_001258488.1
RefSeq:NP_033776.1 UniGene:Mm.35300 ProteinModelPortal:Q9Z0E3
SMR:Q9Z0E3 DIP:DIP-31030N IntAct:Q9Z0E3 STRING:Q9Z0E3
PhosphoSite:Q9Z0E3 PRIDE:Q9Z0E3 Ensembl:ENSMUST00000019257
Ensembl:ENSMUST00000105395 Ensembl:ENSMUST00000105396
Ensembl:ENSMUST00000128241 Ensembl:ENSMUST00000130972
Ensembl:ENSMUST00000140636 Ensembl:ENSMUST00000145975
Ensembl:ENSMUST00000148469 Ensembl:ENSMUST00000154374
Ensembl:ENSMUST00000155021 Ensembl:ENSMUST00000156417 GeneID:11634
KEGG:mmu:11634 UCSC:uc007fws.1 UCSC:uc007fwt.1 UCSC:uc007fwu.1
UCSC:uc007fwv.1 UCSC:uc007fww.1 UCSC:uc007fwx.1 UCSC:uc007fwz.1
UCSC:uc007fxa.1 UCSC:uc007fxb.1 GeneTree:ENSGT00440000034278
InParanoid:Q9Z0E3 ChiTaRS:AIRE NextBio:279201 Bgee:Q9Z0E3
Genevestigator:Q9Z0E3 GermOnline:ENSMUSG00000000731 Uniprot:Q9Z0E3
Length = 552
Score = 147 (56.8 bits), Expect = 1.8e-05, Sum P(4) = 1.8e-05
Identities = 27/49 (55%), Positives = 31/49 (63%)
Query: 507 SDDMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQG 553
++D C VC DG L+ C+GCP AFH ACL P L IP WRC C QG
Sbjct: 297 NEDECAVCHDGGELICCDGCPRAFHLACLSPPLQEIPSGLWRCSCCLQG 345
Score = 40 (19.1 bits), Expect = 1.8e-05, Sum P(4) = 1.8e-05
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 184 GSSGANDGVLCARNMEIKMSKKVV 207
G+ GA +G+L + E SKK +
Sbjct: 202 GTRGAVEGILIQQVFESGRSKKCI 225
Score = 38 (18.4 bits), Expect = 1.8e-05, Sum P(4) = 1.8e-05
Identities = 7/19 (36%), Positives = 8/19 (42%)
Query: 605 DDRTVIYCDQCEKEFHVGC 623
D V+ C C FH C
Sbjct: 439 DGTEVLRCAHCAAAFHWRC 457
Score = 38 (18.4 bits), Expect = 1.8e-05, Sum P(4) = 1.8e-05
Identities = 10/32 (31%), Positives = 13/32 (40%)
Query: 108 LSDGDERTESSYAETSRTDNNSGDVSKSHVVL 139
L+D D E + ET R G H +L
Sbjct: 33 LADHDVVPEDKFQETLRLKEKEGCPQAFHALL 64
>ZFIN|ZDB-GENE-121031-4 [details] [associations]
symbol:chd3 "chromodomain helicase DNA binding
protein 3" species:7955 "Danio rerio" [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR001965
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00628 Pfam:PF08073
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 ZFIN:ZDB-GENE-121031-4
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0016818 EMBL:BC127572
EMBL:BC127574 IPI:IPI00488488 UniGene:Dr.66871 eggNOG:NOG299768
InParanoid:A0PJQ7 OMA:DSTHEET Uniprot:A0PJQ7
Length = 430
Score = 131 (51.2 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 21/46 (45%), Positives = 28/46 (60%)
Query: 509 DMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQ 552
D C VC G ++LC+ CP A+H CL+P L PE W CP+C +
Sbjct: 384 DYCEVCQQGGEIILCDTCPRAYHLVCLEPELEKAPEGKWSCPHCEK 429
Score = 50 (22.7 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 103 SSEETLSDGDERTESSYAETSRTDNNSGDVSKS 135
SSEE D E+ SS +S ++SG V K+
Sbjct: 325 SSEEVDEDDSEQENSSVHSSSVRSDSSGRVKKN 357
Score = 47 (21.6 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 23/114 (20%), Positives = 44/114 (38%)
Query: 17 DVECSSRTESKQDRELLTDNVESDSFPNGKHAKEEALND---DIKSEVSNPVVSPKEFTS 73
D E + + R+ + ++E DS P+ + A +D + K + + K+
Sbjct: 87 DKEKEGKIAKARKRKKIESDIERDSEPDYAMNSDSAASDYGGEKKKKKKHKDKKEKKTKK 146
Query: 74 SL---QDITSQETKLVTESCNQVLSTTSTGNLSSEETLSDGDERTESSYAETSR 124
+D T +ET E G + T ++ D RT ++Y S+
Sbjct: 147 KKKEDEDSTHEETTKPVEMKTSAQLAREWGLEDVDHTFTEEDYRTLTNYKAFSQ 200
>UNIPROTKB|O43918 [details] [associations]
symbol:AIRE "Autoimmune regulator" species:9606 "Homo
sapiens" [GO:0045182 "translation regulator activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0042393 "histone binding" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IDA] [GO:0006955 "immune
response" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0015629 "actin cytoskeleton" evidence=IDA] InterPro:IPR000770
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR008087
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414
SMART:SM00249 SMART:SM00258 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0045893 GO:GO:0006955 GO:GO:0006417
GO:GO:0046872 GO:GO:0015629 GO:GO:0008270 GO:GO:0045944
EMBL:CH471079 GO:GO:0006351 GO:GO:0003682 GO:GO:0045182
GO:GO:0044212 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AB006682 EMBL:AB006683 EMBL:AB006684
EMBL:AB006685 EMBL:Z97990 EMBL:AJ009610 EMBL:AP001754 EMBL:AP001060
EMBL:BC137268 EMBL:BC137270 IPI:IPI00015149 IPI:IPI00031178
IPI:IPI00031188 RefSeq:NP_000374.1 UniGene:Hs.129829 PDB:1XWH
PDB:2KE1 PDB:2KFT PDB:2LRI PDBsum:1XWH PDBsum:2KE1 PDBsum:2KFT
PDBsum:2LRI ProteinModelPortal:O43918 SMR:O43918 DIP:DIP-47504N
IntAct:O43918 MINT:MINT-6542056 STRING:O43918 PhosphoSite:O43918
PRIDE:O43918 Ensembl:ENST00000291582 Ensembl:ENST00000337909
Ensembl:ENST00000397994 Ensembl:ENST00000468282 GeneID:326
KEGG:hsa:326 UCSC:uc002zei.2 CTD:326 GeneCards:GC21P045705
HGNC:HGNC:360 HPA:HPA038267 MIM:109100 MIM:240300 MIM:607358
neXtProt:NX_O43918 Orphanet:3453 PharmGKB:PA24654 eggNOG:NOG317492
HOGENOM:HOG000060093 HOVERGEN:HBG014961 InParanoid:O43918 KO:K10603
OMA:NDDECAV OrthoDB:EOG4VX25M PhylomeDB:O43918
EvolutionaryTrace:O43918 GenomeRNAi:326 NextBio:1337
ArrayExpress:O43918 Bgee:O43918 CleanEx:HS_AIRE
Genevestigator:O43918 GermOnline:ENSG00000160224 GO:GO:0042393
GO:GO:0006959 Gene3D:3.10.390.10 InterPro:IPR010919 SUPFAM:SSF63763
Uniprot:O43918
Length = 545
Score = 147 (56.8 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 26/48 (54%), Positives = 31/48 (64%)
Query: 507 SDDMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQ 552
++D C VC DG L+ C+GCP AFH ACL P L IP WRC +C Q
Sbjct: 295 NEDECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQ 342
Score = 39 (18.8 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 7/19 (36%), Positives = 8/19 (42%)
Query: 605 DDRTVIYCDQCEKEFHVGC 623
D V+ C C FH C
Sbjct: 439 DGTDVLRCTHCAAAFHWRC 457
Score = 38 (18.4 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 184 GSSGANDGVLCARNMEIKMSKKVV 207
G+ GA +G+L + E SKK +
Sbjct: 201 GARGAVEGILIQQVFESGGSKKCI 224
>UNIPROTKB|J9NRN3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 EMBL:AAEX03003895
EMBL:AAEX03003896 EMBL:AAEX03003897 Ensembl:ENSCAFT00000044104
Uniprot:J9NRN3
Length = 1195
Score = 152 (58.6 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 36/118 (30%), Positives = 51/118 (43%)
Query: 509 DMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQGHSSSMSRSVDLKG 566
D C VC G ++LC+ CP A+H CLDP L PE W CP+C + + +
Sbjct: 318 DYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEK-------EGIQWEP 370
Query: 567 GLEAPGAEVGGCVICRLSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEFHVGCL 624
+ E GGC E+ + CR D ++ CD C +H+ CL
Sbjct: 371 KDDDDEEEEGGC-----EEEEDDHMEFCR------VCKDGGELLCCDACPSSYHLHCL 417
Score = 39 (18.8 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 24 TESKQDRELLTDNVESDSFPNGKHAKEEALND 55
+E++ D E +++ SD PN K K++ L D
Sbjct: 50 SENEDDLEEKSESEGSDYSPNKK--KKKKLKD 79
>FB|FBgn0033636 [details] [associations]
symbol:tou "toutatis" species:7227 "Drosophila melanogaster"
[GO:0006338 "chromatin remodeling" evidence=NAS] [GO:0003682
"chromatin binding" evidence=NAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007399 "nervous system development" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0008134 "transcription factor binding"
evidence=IPI] InterPro:IPR001487 InterPro:IPR001739
InterPro:IPR001876 InterPro:IPR001965 InterPro:IPR016177
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01429
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50982
SMART:SM00249 SMART:SM00297 SMART:SM00547 EMBL:AE013599
GO:GO:0005634 GO:GO:0007399 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0045944 SUPFAM:SSF54171 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018501
Pfam:PF02791 PROSITE:PS50827 GeneTree:ENSGT00660000095335
Gene3D:3.30.890.10 UniGene:Dm.2658 GeneID:36241
KEGG:dme:Dmel_CG10897 CTD:36241 FlyBase:FBgn0033636
GenomeRNAi:36241 NextBio:797507 RefSeq:NP_001097270.1
ProteinModelPortal:A8DYA3 SMR:A8DYA3 STRING:A8DYA3
EnsemblMetazoa:FBtr0113066 UCSC:CG10897-RE OMA:GRHTTLL
PhylomeDB:A8DYA3 Bgee:A8DYA3 Uniprot:A8DYA3
Length = 3131
Score = 114 (45.2 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 28/80 (35%), Positives = 38/80 (47%)
Query: 511 CHVCGDGEN---LLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQGHSSSMSRSVDLK 565
C C GEN LLLC+GC +H C P + IP+ W C C + ++ R +
Sbjct: 2641 CQFCTSGENEDKLLLCDGCDKGYHTYCFKPKMDNIPDGDWYCYECV--NKATNERKCIVC 2698
Query: 566 GGLEAPGAEVGGCVICRLSP 585
GG P + VG + C L P
Sbjct: 2699 GG-HRP-SPVGKMIYCDLCP 2716
Score = 77 (32.2 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 609 VIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFC 642
+IYCD C + +H C + L ++P+ KW+C
Sbjct: 2709 MIYCDLCPRAYHADCY----IPPLLKVPRGKWYC 2738
Score = 60 (26.2 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 28/116 (24%), Positives = 48/116 (41%)
Query: 24 TESKQDRELLTDNVESDSFPNGKHAKEEALNDDIKSEVSNPV-VSPKEFTSSLQDITSQE 82
T SK+ ++ + E PNGK +K KS ++ P +P +L+ +
Sbjct: 2526 TPSKKQQQK-KNKKEQQLTPNGKESKS-------KSAINKPENQAPLSIKINLKALAQNG 2577
Query: 83 TKLVTESCNQVLSTTSTGNLSSEETLSDGD----ERTESSYAETSRTDNNSGDVSK 134
L+ +L+ + T + SS SD D +RT+ R N+ + SK
Sbjct: 2578 QCLLKTKTPPILTKSPTASPSSHPNTSDSDSDFGKRTKKKSGGKRRRSANNTNSSK 2633
Score = 49 (22.3 bits), Expect = 0.00076, Sum P(4) = 0.00076
Identities = 23/122 (18%), Positives = 49/122 (40%)
Query: 310 KKVAGSSFNEGSFRVWKASHHLRKGLVEHDEKHNMKLPSLPHSIISCSSLALEESISPTS 369
+++ G+S GS + + + G EH ++LP I SS+ + TS
Sbjct: 473 QQMGGNSSTSGSGKSSSKDYMMGTGS-EHPSLLGVRLPPDTEIIKYTSSIVGPKIPGTTS 531
Query: 370 CSFVQDTGREQTHMKEMLEERKRGVKRPFMHQKRTAEGGTKKRDNDLHRLLFLPNGLPDG 429
+ + + ++++ ++ + Q++ A+ N + LL P GL
Sbjct: 532 RGRKKTISETEQQTTQQQQKQQHQAEQHLLQQQQQAQKELDSTKNAISSLLAFP-GLSPA 590
Query: 430 ER 431
+R
Sbjct: 591 KR 592
Score = 44 (20.5 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 20/65 (30%), Positives = 31/65 (47%)
Query: 106 ETLSDGDE-RTESSYAETSRTDNNSGDVSKSHVVLEIPKHVSSSSGIRKITFKFSKRKE- 163
ET +D + ES +E+ D N +V++ V LE+ + IR +T + R E
Sbjct: 924 ETSTDSESVAAESGLSESESEDANILNVAELRVPLELGW--KRETVIRGLTKQGQIRGEV 981
Query: 164 DYVAP 168
Y AP
Sbjct: 982 TYYAP 986
Score = 42 (19.8 bits), Expect = 0.00076, Sum P(4) = 0.00076
Identities = 22/99 (22%), Positives = 42/99 (42%)
Query: 62 SNPVVSPKEFTSSLQDITSQETKLVTESCNQVLSTTSTGNLSSEETLSDGDERTESSYAE 121
SNP++SP S +S++ S N + S + G L T + +++A
Sbjct: 394 SNPLMSPHAGMGSSSSSSSKDRDKNNPSLNALNSLSQFGALGM--TPQQSMQAAMNAFAA 451
Query: 122 TSRTDNNSGDVSKSHVVLEIPKHV---SSSSGIRKITFK 157
++ ++ S H + + + SS+SG K + K
Sbjct: 452 STGVSPSATVTSSPHHSSQQQQQMGGNSSTSGSGKSSSK 490
>ZFIN|ZDB-GENE-080519-2 [details] [associations]
symbol:nsd1b "nuclear receptor binding SET domain
protein 1b" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0032259 "methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855
ZFIN:ZDB-GENE-080519-2 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024
GO:GO:0034968 InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 EMBL:BX842703 IPI:IPI00488658
Ensembl:ENSDART00000131188 Bgee:F1Q9U9 Uniprot:F1Q9U9
Length = 1873
Score = 130 (50.8 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 24/57 (42%), Positives = 31/57 (54%)
Query: 511 CHVCGDGENLLLCNGCPLAFHAACLDPLLIPESGWRCPNCRQGHSSSMSRSVDLKGG 567
C VC +G +LL C CP AFH CL+ + +PE W C +CR G V +K G
Sbjct: 1263 CFVCSEGGSLLCCESCPAAFHRECLN-IDMPEGSWYCNDCRAGKKPHYKEVVWVKVG 1318
Score = 62 (26.9 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 21/80 (26%), Positives = 38/80 (47%)
Query: 93 VLSTTSTGNLSSEETLSDGDERTESSYAETSRTDNNSGDVSKSHVVLEIPKHVSSSSGIR 152
V+ T L +EE L D + E + ++ + + +S++H+ I K SS +
Sbjct: 645 VVEPLPTTELINEEPLLISDVKDEKATSKQKKVKPKTNVMSENHLASTISKTAQRSS--K 702
Query: 153 KITFKFSKRKEDYVAPLAYE 172
KI+ K K+ D A + Y+
Sbjct: 703 KISLK--KKTTDIKANIDYK 720
Score = 56 (24.8 bits), Expect = 0.00012, Sum P(5) = 0.00012
Identities = 28/110 (25%), Positives = 41/110 (37%)
Query: 16 MDVECSSRTESKQDRELLTDNVESDSFPNGKHAKEEALNDDIKSEVSNP--VVSP-KEFT 72
MD S S + D+ S F NG H + D+ + EV +P V P +
Sbjct: 1 MDAGLSDICTSPPSPDFSLDS--SSPFANGLHFESILFEDEEEDEVMDPEPVSQPERNLC 58
Query: 73 SSLQDITSQETKLVTESCNQVLSTTSTGNLSSEETLSDGDERTESSYAET 122
S D T+ T L T + S + S E+ + D+ S T
Sbjct: 59 GSTSDCTTN-TNLKTNLDGKSRRKNSKAHSSLEQDVVFQDKAKSDSGLST 107
Score = 52 (23.4 bits), Expect = 0.00026, Sum P(3) = 0.00026
Identities = 27/127 (21%), Positives = 54/127 (42%)
Query: 17 DVEC-SSRTESKQDRELLTDNVESDSF--PNGKH------AKEEALNDDIKSEVSNPVVS 67
D C +S+ + K +++L ++E++ P K + + N ++ + S
Sbjct: 949 DSVCLNSKRQRKPTKKILESSIEAEPILIPKRKMKSMKICSSGHSTNSGVEQQSSKSKNK 1008
Query: 68 PK-EFTSSLQDITSQETKLVTESCNQVLSTTSTGNLSS-EETLS-DGDERTESSYAETSR 124
E + D + T++ + VL T +T + +TL G + TESS + R
Sbjct: 1009 LSIESSDPPSDPMLKSTEMEIDVSPAVLQTINTESADDGSDTLRCSGSQMTESSEFYSER 1068
Query: 125 TDNNSGD 131
+N+ D
Sbjct: 1069 EENSQSD 1075
Score = 51 (23.0 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 14/50 (28%), Positives = 22/50 (44%)
Query: 605 DDRTVIYCDQ--CEKEFHVGCLRKNGLCDLKEIPKDKWFC----CDDCNR 648
D ++ C + C K +H CL +L + P +W C CD C +
Sbjct: 1674 DGGQIVSCKRPGCPKVYHADCL------NLTKRPAGRWECPWHQCDLCGQ 1717
Score = 44 (20.5 bits), Expect = 0.00012, Sum P(5) = 0.00012
Identities = 13/59 (22%), Positives = 28/59 (47%)
Query: 338 HDEKHNMKLPS---LPHSIISCS----SLALEES---ISPTSCSFVQDTGREQTHMKEM 386
HD K + K+ + L ++ C S+ E+ +S C+F T ++ +H+ ++
Sbjct: 520 HDLKEDSKISTHAKLSSELLCCKDDEHSVKSEDESSLVSQAPCAFHSSTRKQNSHVNDL 578
Score = 41 (19.5 bits), Expect = 0.00012, Sum P(5) = 0.00012
Identities = 12/44 (27%), Positives = 21/44 (47%)
Query: 112 DERTESSYAETSRTDNNSGDVSKSHVVLEIPKHVSSSSGIRKIT 155
DE T S + ++ V+ ++LE P+ S SS + I+
Sbjct: 218 DENTRHSIPKRFLNSWSASVVAAEALLLEKPRVTSPSSAFKTIS 261
>UNIPROTKB|E1C765 [details] [associations]
symbol:WHSC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0003149 "membranous septum
morphogenesis" evidence=IEA] [GO:0003289 "atrial septum primum
morphogenesis" evidence=IEA] [GO:0003290 "atrial septum secundum
morphogenesis" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0031965 "nuclear membrane" evidence=IEA] [GO:0060348 "bone
development" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR009071 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855 Pfam:PF00505
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0031965
GO:GO:0003682 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 OMA:DVKRCVV
EMBL:AADN02014946 IPI:IPI00588925 Ensembl:ENSGALT00000025327
Uniprot:E1C765
Length = 1372
Score = 115 (45.5 bits), Expect = 2.9e-05, Sum P(3) = 2.9e-05
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 511 CHVCG-DGENLLLCNGCPLAFHAACLDPLLIPESGWRCPNCRQG 553
C VC +G +LL C CP AFH CL+ + +P+ W C +CR G
Sbjct: 839 CFVCSKEGGSLLCCESCPAAFHPDCLN-IEMPDGSWYCNDCRAG 881
Score = 105 (42.0 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 29/88 (32%), Positives = 41/88 (46%)
Query: 482 YTSNGMTLHDIAISLAMGQRRTTGGSDDMCHVCGDGENLLLCNG-CPLAFHAACLDPLLI 540
Y S T +++IS +R T + +C +C +LLLC G C AFH +CL
Sbjct: 646 YESADETQTEVSISSKKSERGTGTKKEYVCQLCEKTGDLLLCEGLCYRAFHVSCLGLSGR 705
Query: 541 PESGWRCPNCRQG-HSSSM--SRSVDLK 565
P + C C G H+ + R DLK
Sbjct: 706 PAGKFVCSECTSGVHTCFVCKERKADLK 733
Score = 64 (27.6 bits), Expect = 2.9e-05, Sum P(3) = 2.9e-05
Identities = 27/123 (21%), Positives = 51/123 (41%)
Query: 15 EMDVECSSRTESKQDRELLTDNVESDSFPNGKHAKEEALNDDIKSEVSNPVVSPKEFTSS 74
+ +V+ + R + D++ +N + ++ N K AK + S + K + +
Sbjct: 543 DFEVQEAPRKRLRMDKQ---NNRKRET-SNDKTAKTNSTKVTETSSSQKNQSATKNLSDA 598
Query: 75 LQDITSQETKLVTESCNQVLSTTSTGNLS-SEETLSDG--DERTESSYAETSRTDNNSGD 131
+ + + ES S +S+ + S +E + DG DER+ES Y T
Sbjct: 599 CKPLKKRNRASAAESSTLAFSKSSSPSASLTENEIFDGPGDERSESPYESADETQTEVSI 658
Query: 132 VSK 134
SK
Sbjct: 659 SSK 661
Score = 62 (26.9 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 15/53 (28%), Positives = 25/53 (47%)
Query: 608 TVIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFCCDDCN---RIHAALQDFV 657
+++ C+ C FH CL E+P W+C +DC ++H QD +
Sbjct: 848 SLLCCESCPAAFHPDCLNI-------EMPDGSWYC-NDCRAGKKLH--FQDII 890
Score = 60 (26.2 bits), Expect = 2.9e-05, Sum P(3) = 2.9e-05
Identities = 19/63 (30%), Positives = 27/63 (42%)
Query: 605 DDRTVIYCDQ--CEKEFHVGCLRKNGLCDLKEIPK--DKWFC----CDDCNRIHAALQDF 656
D ++ CD+ C K +H+ CL DL + P KW C CD C + + F
Sbjct: 1253 DGGQLVLCDRKSCTKAYHLSCL------DLAKRPFVIGKWECPWHHCDVCGKPSVSFCHF 1306
Query: 657 VSN 659
N
Sbjct: 1307 CPN 1309
>UNIPROTKB|F1RIM3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:FP102454 Ensembl:ENSSSCT00000003736 Uniprot:F1RIM3
Length = 1723
Score = 152 (58.6 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 36/118 (30%), Positives = 51/118 (43%)
Query: 509 DMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQGHSSSMSRSVDLKG 566
D C VC G ++LC+ CP A+H CLDP L PE W CP+C + + +
Sbjct: 276 DYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEK-------EGIQWEP 328
Query: 567 GLEAPGAEVGGCVICRLSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEFHVGCL 624
+ E GGC E+ + CR D ++ CD C +H+ CL
Sbjct: 329 KDDDDEEEEGGC-----EEEEDDHMEFCR------VCKDGGELLCCDACPSSYHLHCL 375
Score = 41 (19.5 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 24 TESKQDRELLTDNVESDSFPNGKHAKEEALND 55
+E+++D E +++ SD PN K K++ L D
Sbjct: 8 SENEEDLEEKSESEGSDYSPNKK--KKKKLKD 37
>FB|FBgn0029861 [details] [associations]
symbol:CG3815 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0070822 "Sin3-type complex" evidence=IDA]
InterPro:IPR000253 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016 SMART:SM00249
GO:GO:0046872 EMBL:AE014298 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0070822 HSSP:Q14839
eggNOG:NOG145066 GeneTree:ENSGT00440000033777 EMBL:AY069054
RefSeq:NP_572311.1 UniGene:Dm.2312 SMR:Q9W410 IntAct:Q9W410
MINT:MINT-921456 STRING:Q9W410 EnsemblMetazoa:FBtr0070899
GeneID:31571 KEGG:dme:Dmel_CG3815 UCSC:CG3815-RA
FlyBase:FBgn0029861 InParanoid:Q9W410 OMA:SEFGTEV OrthoDB:EOG45HQC9
GenomeRNAi:31571 NextBio:774240 Uniprot:Q9W410
Length = 878
Score = 130 (50.8 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 30/82 (36%), Positives = 37/82 (45%)
Query: 500 QRRTTGGSDDMCHVCGDGENLLLCNGCPLAFHAACLDPLL----IPESGWRCPNCRQGHS 555
+R G + D C C +G NLL C+ CP +FH C DP L IP W C +CR
Sbjct: 45 RRPGRGHNHDYCDACEEGGNLLCCDRCPSSFHLQCHDPPLSEEDIPSGQWLCHSCRMSKL 104
Query: 556 SSMSRSVDLKGGLE-APGAEVG 576
S S +E P A G
Sbjct: 105 SQPPASSSKASSVERVPSAGSG 126
Score = 57 (25.1 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 21/70 (30%), Positives = 31/70 (44%)
Query: 609 VIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFCCDDCNRIHAALQDFV-SNRAQTIPAS 667
+I CD C FH CL L +P W C + HA ++F+ +N +I A+
Sbjct: 271 LISCDYCPLYFHQDCLDP----PLTALPAGLWMCPN-----HA--ENFIDANMTNSISAT 319
Query: 668 SLSTI-NRKH 676
+ NR H
Sbjct: 320 ERVRLWNRFH 329
>UNIPROTKB|F1S4N3 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0034648 "histone demethylase
activity (H3-dimethyl-K4 specific)" evidence=IEA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 GO:GO:0034647 OMA:CENEKEM
EMBL:CU986276 Ensembl:ENSSSCT00000011960 Uniprot:F1S4N3
Length = 1304
Score = 124 (48.7 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 24/56 (42%), Positives = 34/56 (60%)
Query: 501 RRTTGGSD-DMCHVCGDG---ENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNC 550
++TT D +C +CG G + LLLC+GC ++H CL P L +P+ WRCP C
Sbjct: 300 KKTTNAVDLYVCLLCGSGSDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKC 355
Score = 66 (28.3 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 18/66 (27%), Positives = 30/66 (45%)
Query: 583 LSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFC 642
LSP ++ D+++C AA +I C+ C FH C+ + + + P+ W C
Sbjct: 1167 LSPVQDVDMKVCLCQKAPAAP-----MIQCELCRDAFHTSCV---AVPSISQGPRI-WLC 1217
Query: 643 CDDCNR 648
C R
Sbjct: 1218 -PHCRR 1222
>UNIPROTKB|Q8TDI0 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
EMBL:AF425231 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AL031847
GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598
HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 OrthoDB:EOG4WH8JX
EMBL:AL035406 EMBL:AL117491 EMBL:AB007913 IPI:IPI00152535
PIR:T17269 RefSeq:NP_056372.1 UniGene:Hs.522898
ProteinModelPortal:Q8TDI0 SMR:Q8TDI0 IntAct:Q8TDI0 STRING:Q8TDI0
PhosphoSite:Q8TDI0 DMDM:51701343 PaxDb:Q8TDI0 PRIDE:Q8TDI0
DNASU:26038 Ensembl:ENST00000262450 GeneID:26038 KEGG:hsa:26038
UCSC:uc001amb.2 CTD:26038 GeneCards:GC01M006096 HGNC:HGNC:16816
HPA:HPA015809 MIM:610771 neXtProt:NX_Q8TDI0 PharmGKB:PA134969178
InParanoid:Q8TDI0 KO:K14435 OMA:KRIDDGD PhylomeDB:Q8TDI0
ChiTaRS:CHD5 GenomeRNAi:26038 NextBio:47863 ArrayExpress:Q8TDI0
Bgee:Q8TDI0 CleanEx:HS_CHD5 Genevestigator:Q8TDI0
GermOnline:ENSG00000116254 Uniprot:Q8TDI0
Length = 1954
Score = 152 (58.6 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 36/118 (30%), Positives = 51/118 (43%)
Query: 509 DMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQGHSSSMSRSVDLKG 566
D C VC G ++LC+ CP A+H CLDP L PE W CP+C + + +
Sbjct: 344 DYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEK-------EGIQWEP 396
Query: 567 GLEAPGAEVGGCVICRLSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEFHVGCL 624
+ E GGC E+ + CR D ++ CD C +H+ CL
Sbjct: 397 KDDDDEEEEGGC-----EEEEDDHMEFCR------VCKDGGELLCCDACPSSYHLHCL 443
Score = 41 (19.5 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 24 TESKQDRELLTDNVESDSFPNGKHAKEEALND 55
+E+++D E +++ SD PN K K++ L D
Sbjct: 76 SENEEDLEEKSESEGSDYSPNKK--KKKKLKD 105
>WB|WBGene00000482 [details] [associations]
symbol:chd-3 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=TAS]
[GO:0040027 "negative regulation of vulval development"
evidence=IMP] [GO:0046580 "negative regulation of Ras protein
signal transduction" evidence=IMP] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0000118 "histone deacetylase
complex" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=TAS] [GO:0003678 "DNA helicase activity" evidence=ISS]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003682 GO:GO:0006338
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0001709 GO:GO:0046580 GO:GO:0008026 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0000118 GeneTree:ENSGT00560000076896
EMBL:AF308444 EMBL:Z67884 EMBL:Z67881 PIR:T20160 RefSeq:NP_510140.1
UniGene:Cel.16950 ProteinModelPortal:Q22516 SMR:Q22516
STRING:Q22516 PaxDb:Q22516 EnsemblMetazoa:T14G8.1 GeneID:181421
KEGG:cel:CELE_T14G8.1 UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1
HOGENOM:HOG000231124 InParanoid:Q22516 OMA:INIIMEL NextBio:913870
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
Uniprot:Q22516
Length = 1787
Score = 139 (54.0 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 22/44 (50%), Positives = 29/44 (65%)
Query: 509 DMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNC 550
D C +C + N+LLC+ CP ++HA C+DP L IPE W CP C
Sbjct: 329 DYCRICKETSNILLCDTCPSSYHAYCIDPPLTEIPEGEWSCPRC 372
>UNIPROTKB|Q22516 [details] [associations]
symbol:chd-3 "Chromodomain-helicase-DNA-binding protein 3
homolog" species:6239 "Caenorhabditis elegans" [GO:0032508 "DNA
duplex unwinding" evidence=ISS] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003682 GO:GO:0006338 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0001709 GO:GO:0046580
GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598 GO:GO:0000118
GeneTree:ENSGT00560000076896 EMBL:AF308444 EMBL:Z67884 EMBL:Z67881
PIR:T20160 RefSeq:NP_510140.1 UniGene:Cel.16950
ProteinModelPortal:Q22516 SMR:Q22516 STRING:Q22516 PaxDb:Q22516
EnsemblMetazoa:T14G8.1 GeneID:181421 KEGG:cel:CELE_T14G8.1
UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1 HOGENOM:HOG000231124
InParanoid:Q22516 OMA:INIIMEL NextBio:913870 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 Uniprot:Q22516
Length = 1787
Score = 139 (54.0 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 22/44 (50%), Positives = 29/44 (65%)
Query: 509 DMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNC 550
D C +C + N+LLC+ CP ++HA C+DP L IPE W CP C
Sbjct: 329 DYCRICKETSNILLCDTCPSSYHAYCIDPPLTEIPEGEWSCPRC 372
>UNIPROTKB|O96028 [details] [associations]
symbol:WHSC1 "Histone-lysine N-methyltransferase NSD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003149 "membranous
septum morphogenesis" evidence=IEA] [GO:0003289 "atrial septum
primum morphogenesis" evidence=IEA] [GO:0003290 "atrial septum
secundum morphogenesis" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0060348 "bone development" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0009653 "anatomical structure morphogenesis"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0031965 "nuclear membrane"
evidence=IDA] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR009071
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280
PROSITE:PS51215 SMART:SM00184 SMART:SM00249 SMART:SM00317
SMART:SM00570 Pfam:PF00855 Pfam:PF00505 GO:GO:0005737 GO:GO:0005694
GO:GO:0005730 EMBL:CH471131 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0031965 GO:GO:0006351 GO:GO:0003682
GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0003289 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0009653 GO:GO:0060348 eggNOG:COG2940
GO:GO:0018024 InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 EMBL:AL132868
GO:GO:0003149 GO:GO:0003290 Orphanet:280 KO:K11424 EMBL:AF071593
EMBL:AF071594 EMBL:AF083386 EMBL:AF083387 EMBL:AF083388
EMBL:AF083389 EMBL:AF083390 EMBL:AF083391 EMBL:AF178206
EMBL:AF178199 EMBL:AF178198 EMBL:AF178202 EMBL:AF178204
EMBL:AF178205 EMBL:AF178203 EMBL:AF178201 EMBL:AF178200
EMBL:AF178219 EMBL:AF178207 EMBL:AF178216 EMBL:AF178215
EMBL:AF178214 EMBL:AF178213 EMBL:AF178212 EMBL:AF178211
EMBL:AF178210 EMBL:AF178209 EMBL:AF178208 EMBL:AF178218
EMBL:AF178217 EMBL:AF330040 EMBL:AY694128 EMBL:AJ007042
EMBL:AB029013 EMBL:AK289697 EMBL:AC105448 EMBL:BC052254
EMBL:BC070176 EMBL:BC094825 EMBL:BC141815 EMBL:BC152412
IPI:IPI00107486 IPI:IPI00107487 IPI:IPI00218240 IPI:IPI00334604
IPI:IPI00470433 IPI:IPI00790144 IPI:IPI00792674
RefSeq:NP_001035889.1 RefSeq:NP_015627.1 RefSeq:NP_579877.1
RefSeq:NP_579878.1 RefSeq:NP_579889.1 RefSeq:NP_579890.1
UniGene:Hs.113876 HSSP:Q9BYU8 ProteinModelPortal:O96028 SMR:O96028
IntAct:O96028 MINT:MINT-7103764 STRING:O96028 PhosphoSite:O96028
PaxDb:O96028 PRIDE:O96028 DNASU:7468 Ensembl:ENST00000312087
Ensembl:ENST00000353275 Ensembl:ENST00000382888
Ensembl:ENST00000382891 Ensembl:ENST00000382892
Ensembl:ENST00000382895 Ensembl:ENST00000398261
Ensembl:ENST00000420906 Ensembl:ENST00000436793
Ensembl:ENST00000503128 Ensembl:ENST00000508803
Ensembl:ENST00000512700 Ensembl:ENST00000514045 GeneID:7468
KEGG:hsa:7468 UCSC:uc003gdx.3 UCSC:uc003gdy.1 UCSC:uc003gdz.4
UCSC:uc003geg.1 UCSC:uc003geh.1 UCSC:uc003gei.4 CTD:7468
GeneCards:GC04P001840 HGNC:HGNC:12766 HPA:HPA015315 HPA:HPA015801
MIM:602952 neXtProt:NX_O96028 PharmGKB:PA37369 HOVERGEN:HBG053345
InParanoid:O96028 OMA:DVKRCVV ChiTaRS:WHSC1 GenomeRNAi:7468
NextBio:29246 ArrayExpress:O96028 Bgee:O96028 Genevestigator:O96028
GermOnline:ENSG00000109685 Uniprot:O96028
Length = 1365
Score = 122 (48.0 bits), Expect = 6.7e-05, Sum P(3) = 6.7e-05
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 499 GQRRTTGGSDDMCHVCGDGENLLLCNGCPLAFHAACLDPLLIPESGWRCPNCRQG 553
G+R + C VC G +LL C CP AFH CL+ + +P+ W C +CR G
Sbjct: 822 GKRHHAHVNVSWCFVCSKGGSLLCCESCPAAFHPDCLN-IEMPDGSWFCNDCRAG 875
Score = 118 (46.6 bits), Expect = 5.5e-05, Sum P(3) = 5.5e-05
Identities = 33/103 (32%), Positives = 46/103 (44%)
Query: 457 NKEISPSQF--EAHAGMAARRQPYRHIYTSNGMTLHDIAISLAMGQRRTTGGSDDMCHVC 514
+K SPS E + +P Y S T ++++S +R T + +C +C
Sbjct: 614 SKSSSPSASLTENEVSDSPGDEPSESPYESADETQTEVSVSSKKSERGVTAKKEYVCQLC 673
Query: 515 GDGENLLLCNG-CPLAFHAACLDPLLIPESGWRCPNCRQG-HS 555
+LLLC G C AFH ACL PE + C C G HS
Sbjct: 674 EKPGSLLLCEGPCCGAFHLACLGLSRRPEGRFTCSECASGIHS 716
Score = 65 (27.9 bits), Expect = 5.5e-05, Sum P(3) = 5.5e-05
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 608 TVIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFCCDDCN---RIHAALQDFV 657
+++ C+ C FH CL E+P WFC +DC ++H QD +
Sbjct: 842 SLLCCESCPAAFHPDCLNI-------EMPDGSWFC-NDCRAGKKLH--FQDII 884
Score = 60 (26.2 bits), Expect = 6.7e-05, Sum P(3) = 6.7e-05
Identities = 16/50 (32%), Positives = 23/50 (46%)
Query: 605 DDRTVIYCDQ--CEKEFHVGCLRKNGLCDLKEIPKDKWFC----CDDCNR 648
D ++ CD+ C K +H+ CL L + P KW C CD C +
Sbjct: 1247 DGGQLVLCDRKFCTKAYHLSCL------GLGKRPFGKWECPWHHCDVCGK 1290
Score = 53 (23.7 bits), Expect = 5.5e-05, Sum P(3) = 5.5e-05
Identities = 25/120 (20%), Positives = 47/120 (39%)
Query: 53 LNDDIKSEVSNPVVSPKEF--TSSLQDITSQETKLVTESCNQVLSTTSTGNLSSEETLSD 110
LN + E S E +S + + ++ K V E C + SS ETL
Sbjct: 355 LNPQVAKEAGIAAESLGEMAESSGVSEEAAENPKSVREECIPMKRRRRAKLCSSAETLES 414
Query: 111 GDERTESSYAETSRTDNNSGDVS---KSHVVLEIPKHVSSSSGIRKITFKFSKRKEDYVA 167
+ +S+ +T+ D G S + + +P+ + + + F K +++ VA
Sbjct: 415 HPDIGKSTPQKTAEADPRRGVGSPPGRKKTTVSMPRSRKGDAASQFLVF-CQKHRDEVVA 473
Score = 49 (22.3 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 27/132 (20%), Positives = 53/132 (40%)
Query: 8 LEVPADGEMDVECSSRTESKQDRELLT--DNVESDSFPNGKHAKEEALNDDIKSEVSNPV 65
++ P + + + E + R + D+ L D + + + EA + +KS+ +
Sbjct: 532 IQDPTE-DAEAEDTPRKRLRTDKHSLRKRDTITDKTARTSSYKAMEAASS-LKSQAAT-- 587
Query: 66 VSPKEFTSSLQDITSQETKLVTESCNQVLSTTSTGNLS-SEETLSD--GDERTESSYAET 122
K + + + + + S S +S+ + S +E +SD GDE +ES Y
Sbjct: 588 ---KNLSDACKPLKKRNRASTAASSALGFSKSSSPSASLTENEVSDSPGDEPSESPYESA 644
Query: 123 SRTDNNSGDVSK 134
T SK
Sbjct: 645 DETQTEVSVSSK 656
Score = 44 (20.5 bits), Expect = 0.00051, Sum P(3) = 0.00051
Identities = 18/68 (26%), Positives = 29/68 (42%)
Query: 3 ESAVCLEVPADGEMDVECSSRTESKQDRELLTDNVESDSFPNGKHAKEEALNDDIKSEVS 62
ES++C + AD E + E+K R +++ DS + E AL I S
Sbjct: 140 ESSICGDSAADVSQSEENGQKPENKARRNRKR-SIKYDSLLE-QGLVEAALVSKISSPSD 197
Query: 63 NPVVSPKE 70
+ + KE
Sbjct: 198 KKIPAKKE 205
>ZFIN|ZDB-GENE-091118-99 [details] [associations]
symbol:si:ch211-244o18.1 "si:ch211-244o18.1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 ZFIN:ZDB-GENE-091118-99 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
GeneTree:ENSGT00690000101661 EMBL:BX294167 IPI:IPI00993170
Ensembl:ENSDART00000133525 Uniprot:F1R5P1
Length = 589
Score = 131 (51.2 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 49/189 (25%), Positives = 79/189 (41%)
Query: 510 MCHVCG---DGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQ-GHSSSMSRSVD 563
+C CG D LLLC+ C +++H CLDP L +P+ W+C C H + S
Sbjct: 18 VCEACGQASDPGRLLLCDDCDISYHTYCLDPPLQNVPKGSWKCKWCVLCTHCGATSPG-- 75
Query: 564 LKGGLEAPGAEVGGCVICRLSPSENFDIRLC-RSHDFSAATFDDRTVIYCDQCEKEFHVG 622
L+ + + G C + P +C RS+ ++ ++ C QC++ H
Sbjct: 76 LRCEWQNNYTQCGPCASLTVCP-------VCTRSYR------EEELILQCRQCDRWVHGS 122
Query: 623 CLRKNGLCDLKEIPKDKWFCCDDCNRIH------AALQDFVSNRAQTIPASSLSTINRKH 676
C N D+ E D+ F C C R+H AA+ V + A L+ +
Sbjct: 123 CQGLNSDEDV-ENAADEGFDCTLC-RMHTVPTPGAAVPKLVEISEPPMVAQILTKVKENE 180
Query: 677 IEKGILFDG 685
++ DG
Sbjct: 181 FQRTYTQDG 189
>UNIPROTKB|F1NMG7 [details] [associations]
symbol:F1NMG7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0045182 "translation regulator activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001965
InterPro:IPR004865 InterPro:IPR008087 InterPro:IPR019787
Pfam:PF00628 Pfam:PF03172 PRINTS:PR01711 PROSITE:PS50016
PROSITE:PS51414 SMART:SM00249 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0006417 GO:GO:0046872 GO:GO:0015629
GO:GO:0008270 GO:GO:0045944 GO:GO:0003682 GO:GO:0045182
GO:GO:0044212 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 OMA:NDDECAV GO:GO:0006959
GeneTree:ENSGT00440000034278 EMBL:AADN02024441 EMBL:AADN02024442
IPI:IPI00575755 Ensembl:ENSGALT00000002020 ArrayExpress:F1NMG7
Uniprot:F1NMG7
Length = 584
Score = 140 (54.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 30/76 (39%), Positives = 40/76 (52%)
Query: 507 SDDMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNC---RQGHSSSMSRS 561
++D C VCGDG L+ C+GCP AFH CL P L +P W+C +C + HS +
Sbjct: 455 NEDECAVCGDGGELICCDGCPRAFHLPCLVPPLPRVPSGTWQCSSCVAKEEEHSPGAATP 514
Query: 562 VDLKGGLE-APGAEVG 576
E +P EVG
Sbjct: 515 ASGPCRTERSPRPEVG 530
Score = 118 (46.6 bits), Expect = 9.0e-05, Sum P(3) = 9.0e-05
Identities = 25/61 (40%), Positives = 33/61 (54%)
Query: 507 SDDMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESG----WRCPNCRQGHSSSMSR 560
++D C VCGDG L+ C+GCP AFH CL P L +P W C + H S+ R
Sbjct: 300 NEDECAVCGDGGELICCDGCPRAFHLPCLVPPLPRVPSPATAPLWNCTHT--AHHSTDGR 357
Query: 561 S 561
+
Sbjct: 358 T 358
Score = 66 (28.3 bits), Expect = 9.0e-05, Sum P(3) = 9.0e-05
Identities = 15/47 (31%), Positives = 21/47 (44%)
Query: 596 SHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFC 642
+ D A D +I CD C + FH+ CL + L +P W C
Sbjct: 455 NEDECAVCGDGGELICCDGCPRAFHLPCL----VPPLPRVPSGTWQC 497
Score = 37 (18.1 bits), Expect = 9.0e-05, Sum P(3) = 9.0e-05
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 11 PADGEMDVECSSRTES 26
PA+ ++ +CSSR S
Sbjct: 102 PAEVDLGQQCSSRRPS 117
>UNIPROTKB|B3KV94 [details] [associations]
symbol:JARID1B "cDNA FLJ16281 fis, clone NT2RI3003104,
highly similar to Homo sapiens Jumonji, AT rich interactive domain
1B (RBP2-like) (JARID1B), mRNA" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0032453 "histone demethylase activity (H3-K4 specific)"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 EMBL:CH471067 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0032453
HOGENOM:HOG000290719 EMBL:AC098934 EMBL:AC104463 UniGene:Hs.443650
HGNC:HGNC:18039 ChiTaRS:KDM5B HOVERGEN:HBG068574 EMBL:AK122752
IPI:IPI00877939 SMR:B3KV94 STRING:B3KV94 Ensembl:ENST00000235790
Uniprot:B3KV94
Length = 1275
Score = 119 (46.9 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 501 RRTTGGSD-DMCHVCGDG---ENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNC 550
++ T D +C +CG G + LLLC+GC ++H CL P L +P+ WRCP C
Sbjct: 143 KKATNAVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKC 198
Score = 67 (28.6 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 19/66 (28%), Positives = 27/66 (40%)
Query: 583 LSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFC 642
LSP ++ DI++C AA +I C+ C FH C+ + I W C
Sbjct: 1010 LSPLQDVDIKICLCQKAPAAP-----MIQCELCRDAFHTSCVAVPSISQGLRI----WLC 1060
Query: 643 CDDCNR 648
C R
Sbjct: 1061 -PHCRR 1065
>RGD|1311923 [details] [associations]
symbol:Chd3 "chromodomain helicase DNA binding protein 3"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005813 "centrosome" evidence=ISO]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISO]
[GO:0007051 "spindle organization" evidence=ISO] [GO:0016581 "NuRD
complex" evidence=ISO] [GO:0045111 "intermediate filament
cytoskeleton" evidence=ISO] [GO:0051297 "centrosome organization"
evidence=ISO] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326
IPI:IPI00369880 EMBL:AY903245 EMBL:AY903246 UniGene:Rn.232095
STRING:Q2KML1 UCSC:RGD:1311923 Genevestigator:Q2KML1 Uniprot:Q2KML1
Length = 1925
Score = 143 (55.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 36/118 (30%), Positives = 51/118 (43%)
Query: 509 DMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQGHSSSMSRSVDLKG 566
D C VC G ++LC+ CP A+H CLDP L PE W CP+C + + + +
Sbjct: 337 DYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEK--EGVQWEAKEEEE 394
Query: 567 GLEAPGAEVGGCVICRLSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEFHVGCL 624
E G E G E+ + CR D ++ CD C +H+ CL
Sbjct: 395 DYEEEGEE-GE------KEEEDDHMEYCR------VCKDGGELLCCDACISSYHIHCL 439
Score = 46 (21.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 15/57 (26%), Positives = 27/57 (47%)
Query: 376 TGREQTHMKEMLEERKRGVKRPFMHQKRTAEGGTKKRDNDLHRLLFLPNGLPDGERL 432
TG + ++ E+R++ KR ++ +GG K+ + L L GL D E +
Sbjct: 53 TGPGRKRRRKHREKREKKTKR---RKRGEGDGGHKQVEQKSSATLLLTWGLEDVEHV 106
>UNIPROTKB|J3QQU3 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AC024267 HGNC:HGNC:20816
ChiTaRS:PHF12 ProteinModelPortal:J3QQU3 Ensembl:ENST00000583524
Uniprot:J3QQU3
Length = 129
Score = 105 (42.0 bits), Expect = 0.00012, P = 0.00012
Identities = 19/46 (41%), Positives = 24/46 (52%)
Query: 509 DMCHVCGDGENLLLCNGCPLAFHAACLDPLL----IPESGWRCPNC 550
D C C +G +LL C+ CP AFH C +P L +P W C C
Sbjct: 57 DSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC 102
>UNIPROTKB|E2RTI2 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:AAEX03003635
EMBL:AAEX03003636 Ensembl:ENSCAFT00000026729 Uniprot:E2RTI2
Length = 1998
Score = 141 (54.7 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 35/118 (29%), Positives = 51/118 (43%)
Query: 509 DMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQGHSSSMSRSVDLKG 566
D C VC G ++LC+ CP A+H CLDP L PE W CP+C + ++ + +
Sbjct: 379 DYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQWEAKEEEEE- 437
Query: 567 GLEAPGAEVGGCVICRLSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEFHVGCL 624
G E G E+ + CR D ++ CD C +H+ CL
Sbjct: 438 --YEEGEEEGE------KEEEDDHMEYCR------VCKDGGELLCCDACISSYHIHCL 481
Score = 47 (21.6 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 15/57 (26%), Positives = 27/57 (47%)
Query: 376 TGREQTHMKEMLEERKRGVKRPFMHQKRTAEGGTKKRDNDLHRLLFLPNGLPDGERL 432
TG + ++ E++++ KR +K +GG K+ + L L GL D E +
Sbjct: 96 TGPGRKRRRKHREKKEKKTKR---RKKGEGDGGQKQVEQKSSATLLLTWGLEDVEHV 149
>UNIPROTKB|Q9UGL1 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003714 "transcription corepressor activity" evidence=IDA]
[GO:0034647 "histone demethylase activity (H3-trimethyl-K4
specific)" evidence=IDA] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=IDA] [GO:0034720 "histone H3-K4
demethylation" evidence=IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0005634
"nucleus" evidence=TAS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0034721 "histone
H3-K4 demethylation, trimethyl-H3-K4-specific" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GO:GO:0034647 KO:K11446
HOGENOM:HOG000290719 HSSP:Q14839 CTD:10765 OrthoDB:EOG4HT8RC
EMBL:AJ132440 EMBL:AF087481 EMBL:AJ243706 EMBL:AC098934
EMBL:AC104463 IPI:IPI00847436 IPI:IPI00873956 RefSeq:NP_006609.3
UniGene:Hs.443650 ProteinModelPortal:Q9UGL1 SMR:Q9UGL1
DIP:DIP-53652N IntAct:Q9UGL1 STRING:Q9UGL1 PhosphoSite:Q9UGL1
DMDM:296439317 PaxDb:Q9UGL1 PRIDE:Q9UGL1 Ensembl:ENST00000367264
Ensembl:ENST00000367265 GeneID:10765 KEGG:hsa:10765 UCSC:uc001gyf.3
UCSC:uc009xag.3 GeneCards:GC01M202696 H-InvDB:HIX0001478
HGNC:HGNC:18039 HPA:HPA027179 MIM:605393 neXtProt:NX_Q9UGL1
PharmGKB:PA164721626 InParanoid:Q9UGL1 OMA:CENEKEM ChiTaRS:KDM5B
GenomeRNAi:10765 NextBio:40877 ArrayExpress:Q9UGL1 Bgee:Q9UGL1
CleanEx:HS_JARID1B Genevestigator:Q9UGL1 Uniprot:Q9UGL1
Length = 1544
Score = 119 (46.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 501 RRTTGGSD-DMCHVCGDG---ENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNC 550
++ T D +C +CG G + LLLC+GC ++H CL P L +P+ WRCP C
Sbjct: 301 KKATNAVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKC 356
Score = 67 (28.6 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 19/66 (28%), Positives = 27/66 (40%)
Query: 583 LSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFC 642
LSP ++ DI++C AA +I C+ C FH C+ + I W C
Sbjct: 1168 LSPLQDVDIKICLCQKAPAAP-----MIQCELCRDAFHTSCVAVPSISQGLRI----WLC 1218
Query: 643 CDDCNR 648
C R
Sbjct: 1219 -PHCRR 1223
>UNIPROTKB|J9NUG7 [details] [associations]
symbol:WHSC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR009071 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50280
PROSITE:PS51215 SMART:SM00184 SMART:SM00249 SMART:SM00317
SMART:SM00570 Pfam:PF00855 Pfam:PF00505 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 EMBL:AAEX03002459
Ensembl:ENSCAFT00000043831 Uniprot:J9NUG7
Length = 1359
Score = 121 (47.7 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 499 GQRRTTGGSDDMCHVCGDGENLLLCNGCPLAFHAACLDPLLIPESGWRCPNCRQG 553
G+R + C VC G +LL C CP AFH CL+ + +P+ W C +CR G
Sbjct: 816 GKRHHAHVNVSWCFVCSKGGSLLCCESCPAAFHPDCLN-IDMPDGSWFCNDCRAG 869
Score = 63 (27.2 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 18/61 (29%), Positives = 26/61 (42%)
Query: 605 DDRTVIYCDQ--CEKEFHVGCLRKNGLCDLKEIPKDKWFC----CDDCNRIHAALQDFVS 658
D ++ CD+ C K +H+ CL L + P KW C CD C + + F
Sbjct: 1241 DGGQLVLCDRKSCTKAYHLSCL------GLGKRPFGKWECPWHHCDVCGKPSTSFCHFCP 1294
Query: 659 N 659
N
Sbjct: 1295 N 1295
Score = 47 (21.6 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 32/126 (25%), Positives = 53/126 (42%)
Query: 12 ADGEMDVECSSRTESKQDRELLTDNVESDSFPNGKHAKEEALNDDIKSEVSNPVVSPKEF 71
ADGE RT+ R+ T N ++ + K A E A +KS+ + K
Sbjct: 534 ADGEDAPRKRLRTDKHGLRKRETINDKTARTSSCK-AIEAA--SSLKSQAAT-----KHL 585
Query: 72 TSSLQDITSQETKLVTESCNQVLSTTSTGNLS-SEETLSDG--DERTESSYAETSRTDNN 128
+ + + + + + T + + S +S+ + S +E +SDG DE ES Y T
Sbjct: 586 SDACKPL-KKRNRASTAASSTPFSKSSSPSASLTENEVSDGPGDEPLESPYESADETQTE 644
Query: 129 SGDVSK 134
SK
Sbjct: 645 VSISSK 650
Score = 42 (19.8 bits), Expect = 0.00051, Sum P(3) = 0.00051
Identities = 27/122 (22%), Positives = 49/122 (40%)
Query: 267 FEQHAGAKTRHPNNHIYLENGKPIYSIIQELKTAPLG--ILEEVV---KKVAGSSFNEGS 321
FE G P N ++NG P + + KT G + E + A S E
Sbjct: 95 FESQEGKGLGTPPNTTPIKNGSPEIKL-KITKTYMNGKPLFESSICGDGAAAVSQSEENG 153
Query: 322 FRVWKASHHLRKGLVEHDEKHNMKLPSLPHSIISCSSLALEESISPTSCSFVQDTGREQT 381
+ + RK +++D L + +++S S ++ I+ S +TGR++
Sbjct: 154 QKAENKARRSRKRSIKYDSFLEQGL--VEAALVSKISSPSDKKIAAKKES-CPNTGRDKD 210
Query: 382 HM 383
H+
Sbjct: 211 HL 212
>UNIPROTKB|F1PK46 [details] [associations]
symbol:WHSC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR009071 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50280
PROSITE:PS51215 SMART:SM00184 SMART:SM00249 SMART:SM00317
SMART:SM00570 Pfam:PF00855 Pfam:PF00505 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 OMA:DVKRCVV
EMBL:AAEX03002459 Ensembl:ENSCAFT00000023738 Uniprot:F1PK46
Length = 1362
Score = 121 (47.7 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 499 GQRRTTGGSDDMCHVCGDGENLLLCNGCPLAFHAACLDPLLIPESGWRCPNCRQG 553
G+R + C VC G +LL C CP AFH CL+ + +P+ W C +CR G
Sbjct: 819 GKRHHAHVNVSWCFVCSKGGSLLCCESCPAAFHPDCLN-IDMPDGSWFCNDCRAG 872
Score = 63 (27.2 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 18/61 (29%), Positives = 26/61 (42%)
Query: 605 DDRTVIYCDQ--CEKEFHVGCLRKNGLCDLKEIPKDKWFC----CDDCNRIHAALQDFVS 658
D ++ CD+ C K +H+ CL L + P KW C CD C + + F
Sbjct: 1244 DGGQLVLCDRKSCTKAYHLSCL------GLGKRPFGKWECPWHHCDVCGKPSTSFCHFCP 1297
Query: 659 N 659
N
Sbjct: 1298 N 1298
Score = 47 (21.6 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 32/126 (25%), Positives = 53/126 (42%)
Query: 12 ADGEMDVECSSRTESKQDRELLTDNVESDSFPNGKHAKEEALNDDIKSEVSNPVVSPKEF 71
ADGE RT+ R+ T N ++ + K A E A +KS+ + K
Sbjct: 537 ADGEDAPRKRLRTDKHGLRKRETINDKTARTSSCK-AIEAA--SSLKSQAAT-----KHL 588
Query: 72 TSSLQDITSQETKLVTESCNQVLSTTSTGNLS-SEETLSDG--DERTESSYAETSRTDNN 128
+ + + + + + T + + S +S+ + S +E +SDG DE ES Y T
Sbjct: 589 SDACKPL-KKRNRASTAASSTPFSKSSSPSASLTENEVSDGPGDEPLESPYESADETQTE 647
Query: 129 SGDVSK 134
SK
Sbjct: 648 VSISSK 653
Score = 42 (19.8 bits), Expect = 0.00051, Sum P(3) = 0.00051
Identities = 27/122 (22%), Positives = 49/122 (40%)
Query: 267 FEQHAGAKTRHPNNHIYLENGKPIYSIIQELKTAPLG--ILEEVV---KKVAGSSFNEGS 321
FE G P N ++NG P + + KT G + E + A S E
Sbjct: 95 FESQEGKGLGTPPNTTPIKNGSPEIKL-KITKTYMNGKPLFESSICGDGAAAVSQSEENG 153
Query: 322 FRVWKASHHLRKGLVEHDEKHNMKLPSLPHSIISCSSLALEESISPTSCSFVQDTGREQT 381
+ + RK +++D L + +++S S ++ I+ S +TGR++
Sbjct: 154 QKAENKARRSRKRSIKYDSFLEQGL--VEAALVSKISSPSDKKIAAKKES-CPNTGRDKD 210
Query: 382 HM 383
H+
Sbjct: 211 HL 212
>UNIPROTKB|F1N7W5 [details] [associations]
symbol:LOC788840 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 OMA:SDKQALG
GeneTree:ENSGT00530000063984 EMBL:DAAA02014921 IPI:IPI00842008
Ensembl:ENSBTAT00000042589 Uniprot:F1N7W5
Length = 501
Score = 127 (49.8 bits), Expect = 0.00017, P = 0.00017
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 508 DDMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQ 552
D++C C G NL C CP A+H +CLDP L P+ W CP C+Q
Sbjct: 322 DELCAACKRGTNLQPCGTCPRAYHLSCLDPPLKTAPKGVWVCPKCQQ 368
>UNIPROTKB|F1MUR2 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0034648 "histone demethylase
activity (H3-dimethyl-K4 specific)" evidence=IEA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 GeneTree:ENSGT00530000063118
GO:GO:0034647 OMA:CENEKEM EMBL:DAAA02043305 IPI:IPI01001710
Ensembl:ENSBTAT00000028871 Uniprot:F1MUR2
Length = 1484
Score = 124 (48.7 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 24/56 (42%), Positives = 34/56 (60%)
Query: 501 RRTTGGSD-DMCHVCGDG---ENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNC 550
++TT D +C +CG G + LLLC+GC ++H CL P L +P+ WRCP C
Sbjct: 241 KKTTNAVDLYVCLLCGSGSDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKC 296
Score = 61 (26.5 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 17/66 (25%), Positives = 29/66 (43%)
Query: 583 LSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFC 642
LSP + ++R+C AA ++ C+ C FH C+ + + P+ W C
Sbjct: 1108 LSPVHDVEMRVCVCQKAPAAP-----MVQCELCRDAFHTSCVAAPSI---PQGPR-VWLC 1158
Query: 643 CDDCNR 648
+C R
Sbjct: 1159 -PNCRR 1163
>FB|FBgn0023395 [details] [associations]
symbol:Chd3 "Chd3" species:7227 "Drosophila melanogaster"
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS;NAS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0004386 "helicase
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 EMBL:AE014296 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0006333
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 PROSITE:PS00598 GeneTree:ENSGT00560000076896
InterPro:IPR009463 Pfam:PF06465 EMBL:AY071503 EMBL:AF007780
RefSeq:NP_649111.1 ProteinModelPortal:O16102 SMR:O16102
DIP:DIP-21327N MINT:MINT-1651376 STRING:O16102 PaxDb:O16102
EnsemblMetazoa:FBtr0074998 GeneID:40111 KEGG:dme:Dmel_CG9594
UCSC:CG9594-RA CTD:1107 FlyBase:FBgn0023395 InParanoid:O16102
OMA:IKWRDLA OrthoDB:EOG4JH9WN PhylomeDB:O16102 GenomeRNAi:40111
NextBio:817050 Bgee:O16102 GermOnline:CG9594 Uniprot:O16102
Length = 892
Score = 130 (50.8 bits), Expect = 0.00018, P = 0.00018
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 508 DDMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNC 550
++ C VC DG +LL C+ CP +H CL P L IP+ W CP C
Sbjct: 35 EEYCKVCSDGGDLLCCDSCPSVYHRTCLSPPLKSIPKGDWICPRC 79
>ASPGD|ASPL0000065953 [details] [associations]
symbol:AN7300 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0035556 "intracellular signal
transduction" evidence=IEA] InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00249 GO:GO:0046872
GO:GO:0008270 EMBL:BN001304 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AACD01000127 eggNOG:NOG145066
OrthoDB:EOG4N6053 RefSeq:XP_680569.1 ProteinModelPortal:Q5AWN0
EnsemblFungi:CADANIAT00000138 GeneID:2870174 KEGG:ani:AN7300.2
HOGENOM:HOG000168186 OMA:PPEGDWF Uniprot:Q5AWN0
Length = 841
Score = 126 (49.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 36/122 (29%), Positives = 55/122 (45%)
Query: 461 SPSQFEAHAGMAARRQPYRHIYTSNGMTLHDIAISLAMGQRRTT--GGSDDMCHVCGDGE 518
SP A+ ++ R H S + D + + T ++D C C
Sbjct: 401 SPGPIAANLDISVSRNTGAHRERSESVASSDAGDNRRLTPSLTDEPAENNDFCRQCEKSG 460
Query: 519 NLLLCNGCPLAFHAACLDPLLIP----ESGWRCPNCRQGHSSSMSRSVD-LKGGLE-APG 572
LL C+GC ++H +CL+P L P E W CP C S+S+S++ L GG+E PG
Sbjct: 461 RLLCCDGCVYSYHFSCLNPPLDPANPPEGDWFCPKC------SVSKSLNTLLGGMEKTPG 514
Query: 573 AE 574
+
Sbjct: 515 RD 516
Score = 53 (23.7 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 607 RTVIYCDQCEKEFHVGCL 624
R +I CD C FH+ CL
Sbjct: 589 RPIIQCDFCPCAFHMDCL 606
>UNIPROTKB|F1LXK8 [details] [associations]
symbol:LOC100362634 "Protein LOC100362634" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR009071 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00249 GO:GO:0046872
GO:GO:0008284 GO:GO:0008270 GO:GO:0045944 SMART:SM00398
SUPFAM:SSF47095 GO:GO:0044212 GO:GO:0043627 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0033148
GO:GO:0035097 GeneTree:ENSGT00690000101661 IPI:IPI00560982
Ensembl:ENSRNOT00000040635 ArrayExpress:F1LXK8 Uniprot:F1LXK8
Length = 2383
Score = 134 (52.2 bits), Expect = 0.00021, P = 0.00021
Identities = 43/149 (28%), Positives = 64/149 (42%)
Query: 510 MCHVCG---DGENLLLCNGCPLAFHAACLDP--LLIPESGWRCP---NCRQGHSSSMSRS 561
+C VCG D LLLC+ C +++H CLDP L +P+ GW+C +C Q ++S
Sbjct: 128 VCEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVPKGGWKCKWCVSCMQCGAASPGFH 187
Query: 562 VDLKGGLE--APGAEVGGCVICRLSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEF 619
+ + P A + C IC +P D+ +I C CE+
Sbjct: 188 CEWQNSYTHCGPCASLVTCPICH-APYVEEDL-----------------LIQCRHCERWM 229
Query: 620 HVGCLRKNGLCDLKEIPK--DKWFCCDDC 646
H GC L E+ + D+ F C C
Sbjct: 230 HAGC---ESLFTEDEVEQAADEGFDCVSC 255
>ZFIN|ZDB-GENE-030131-3876 [details] [associations]
symbol:phf12a "PHD finger protein 12a"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000253 InterPro:IPR001965 InterPro:IPR008984
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016
SMART:SM00249 ZFIN:ZDB-GENE-030131-3876 GO:GO:0046872 GO:GO:0008270
Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GeneTree:ENSGT00440000033777
EMBL:CU694807 IPI:IPI00897047 RefSeq:XP_001919955.3
UniGene:Dr.79049 Ensembl:ENSDART00000111104 GeneID:562152
KEGG:dre:562152 CTD:562152 NextBio:20884273 Uniprot:E7EXI6
Length = 941
Score = 118 (46.6 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 29/89 (32%), Positives = 37/89 (41%)
Query: 509 DMCHVCGDGENLLLCNGCPLAFHAACLDPLL----IPESGWRCPNCRQGHSSSMSRSVDL 564
D+C C +G +LL C+ CP AFH C +P L +P W C C + +
Sbjct: 57 DICDSCREGGDLLCCDHCPAAFHLQCCNPPLSREMLPSGDWMCHRCTVRKKKREQKKEQI 116
Query: 565 KGGLEA-------PGAEVGGCVICRLSPS 586
G LE P A C RL PS
Sbjct: 117 NGLLERQLGKQTPPPAPEQDCGTLRLDPS 145
Score = 61 (26.5 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 16/55 (29%), Positives = 23/55 (41%)
Query: 609 VIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFCCDDCNRIHAALQDF-VSNRAQ 662
+I CD C FH+ CL L P +W C + + + +SNR Q
Sbjct: 297 LIQCDFCPLLFHMDCLDP----PLTAFPTGRWMCPNHIQNLILNQRSLTISNRCQ 347
>UNIPROTKB|D4AC30 [details] [associations]
symbol:D4AC30 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 IPI:IPI00781625
Ensembl:ENSRNOT00000035130 ArrayExpress:D4AC30 Uniprot:D4AC30
Length = 786
Score = 115 (45.5 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 22/61 (36%), Positives = 31/61 (50%)
Query: 509 DMCHVCGDGENLLLCNGCPLAFHAACLDPLL----IPESGWRCPNCRQGHSSSMSRSVDL 564
D C C +G +LL C+ CP AFH C +P L +P W C C +S ++S L
Sbjct: 57 DSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTVRRKASRTQSAKL 116
Query: 565 K 565
+
Sbjct: 117 R 117
Score = 62 (26.9 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 18/75 (24%), Positives = 32/75 (42%)
Query: 609 VIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFCCDDCNRIHAALQDF-VSNRAQTIPAS 667
+I CD C FH+ CL L +P +W C + + ++ +SNR +
Sbjct: 285 LIQCDYCPLLFHMDCLEP----PLTAMPLGRWMCPNHIEHVVLNQKNLTLSNRCRVFDGF 340
Query: 668 SLSTINRKHIEKGIL 682
TI++ ++ L
Sbjct: 341 Q-DTISQHAVKVDFL 354
>WB|WBGene00004319 [details] [associations]
symbol:rbr-2 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0034648
"histone demethylase activity (H3-dimethyl-K4 specific)"
evidence=IDA] [GO:0034647 "histone demethylase activity
(H3-trimethyl-K4 specific)" evidence=IDA] [GO:0034720 "histone
H3-K4 demethylation" evidence=IMP;IDA] [GO:0040028 "regulation of
vulval development" evidence=IMP] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0008340 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0034648 GO:GO:0040028 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:Z69385 eggNOG:NOG327026
GeneTree:ENSGT00530000063118 GO:GO:0034647 KO:K11446 HSSP:Q14839
PIR:T27924 RefSeq:NP_502032.2 ProteinModelPortal:Q23541 SMR:Q23541
STRING:Q23541 PaxDb:Q23541 EnsemblMetazoa:ZK593.4 GeneID:177985
KEGG:cel:CELE_ZK593.4 UCSC:ZK593.4 CTD:177985 WormBase:ZK593.4
HOGENOM:HOG000113216 InParanoid:Q23541 OMA:KANQLLF NextBio:899238
Uniprot:Q23541
Length = 1477
Score = 106 (42.4 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 21/55 (38%), Positives = 30/55 (54%)
Query: 511 CHVCGDGEN---LLLCN--GCPLAFHAACLDPLL--IPESGWRCPNCRQGHSSSM 558
C C +G++ LLLC+ GC H C DP+L +PE WRCP C + + +
Sbjct: 322 CVACNEGKDEDLLLLCDIDGCNNGRHTYCCDPVLDEVPEGEWRCPKCIESEDAKI 376
Score = 77 (32.2 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 24/90 (26%), Positives = 40/90 (44%)
Query: 591 IRLCRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFCCDDCNRIH 650
+ C F+ + D + + C C+ EFHV C + L+++P+ F C C R
Sbjct: 1203 LEACSCLGFNKSD-DSESTLTCIMCDSEFHVRCCEWSPF--LEKLPEG-CFLCVRCLRGQ 1258
Query: 651 AALQDFVSNRAQTIPASSLST-INRKHIEK 679
+ D V+ P+ L T + R I+K
Sbjct: 1259 RPVIDDVTTALNGTPSGCLETHLVRNLIQK 1288
>UNIPROTKB|Q23541 [details] [associations]
symbol:rbr-2 "Lysine-specific demethylase rbr-2"
species:6239 "Caenorhabditis elegans" [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=IDA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005634 GO:GO:0008340
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 GO:GO:0040028
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 EMBL:Z69385
eggNOG:NOG327026 GeneTree:ENSGT00530000063118 GO:GO:0034647
KO:K11446 HSSP:Q14839 PIR:T27924 RefSeq:NP_502032.2
ProteinModelPortal:Q23541 SMR:Q23541 STRING:Q23541 PaxDb:Q23541
EnsemblMetazoa:ZK593.4 GeneID:177985 KEGG:cel:CELE_ZK593.4
UCSC:ZK593.4 CTD:177985 WormBase:ZK593.4 HOGENOM:HOG000113216
InParanoid:Q23541 OMA:KANQLLF NextBio:899238 Uniprot:Q23541
Length = 1477
Score = 106 (42.4 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 21/55 (38%), Positives = 30/55 (54%)
Query: 511 CHVCGDGEN---LLLCN--GCPLAFHAACLDPLL--IPESGWRCPNCRQGHSSSM 558
C C +G++ LLLC+ GC H C DP+L +PE WRCP C + + +
Sbjct: 322 CVACNEGKDEDLLLLCDIDGCNNGRHTYCCDPVLDEVPEGEWRCPKCIESEDAKI 376
Score = 77 (32.2 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 24/90 (26%), Positives = 40/90 (44%)
Query: 591 IRLCRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFCCDDCNRIH 650
+ C F+ + D + + C C+ EFHV C + L+++P+ F C C R
Sbjct: 1203 LEACSCLGFNKSD-DSESTLTCIMCDSEFHVRCCEWSPF--LEKLPEG-CFLCVRCLRGQ 1258
Query: 651 AALQDFVSNRAQTIPASSLST-INRKHIEK 679
+ D V+ P+ L T + R I+K
Sbjct: 1259 RPVIDDVTTALNGTPSGCLETHLVRNLIQK 1288
>UNIPROTKB|J9NSP5 [details] [associations]
symbol:MLL2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR009071 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR003888 InterPro:IPR003889 InterPro:IPR019787
Pfam:PF00628 Pfam:PF05964 Pfam:PF05965 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50280 PROSITE:PS51542 PROSITE:PS51543
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00541
SMART:SM00542 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
SMART:SM00398 SUPFAM:SSF47095 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0008168 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00690000101661
EMBL:AAEX03015073 Ensembl:ENSCAFT00000045185 Uniprot:J9NSP5
Length = 4515
Score = 135 (52.6 bits), Expect = 0.00032, P = 0.00032
Identities = 42/147 (28%), Positives = 64/147 (43%)
Query: 510 MCHVCG---DGENLLLCNGCPLAFHAACLDP--LLIPESGWRCP---NCRQGHSSSMSRS 561
+C VCG D LLLC+ C +++H CLDP L +P+ GW+C +C Q ++S
Sbjct: 791 VCEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVPKGGWKCKWCVSCMQCGAASPGFH 850
Query: 562 VDLKGGLE--APGAEVGGCVICRLSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEF 619
+ + P A + C IC +P D+ +I C CE+
Sbjct: 851 CEWQNSYTHCGPCASLVTCPICH-TPYVEEDL-----------------LIQCRHCERWM 892
Query: 620 HVGCLRKNGLCDLKEIPKDKWFCCDDC 646
H GC D+++ D+ F C C
Sbjct: 893 HAGCESLFTEDDVEQAA-DEGFDCVSC 918
>UNIPROTKB|F1SHC3 [details] [associations]
symbol:MLL2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008168 "methyltransferase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] Pfam:PF00856 InterPro:IPR009071 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR003888 InterPro:IPR003889
InterPro:IPR019787 Pfam:PF00628 Pfam:PF05964 Pfam:PF05965
PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51542 PROSITE:PS51543
SMART:SM00249 SMART:SM00317 SMART:SM00541 SMART:SM00542
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 SMART:SM00398
SUPFAM:SSF47095 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0008168 InterPro:IPR003616
PROSITE:PS50868 GeneTree:ENSGT00690000101661 EMBL:CU633660
EMBL:CU633656 Ensembl:ENSSSCT00000000204 Uniprot:F1SHC3
Length = 5080
Score = 135 (52.6 bits), Expect = 0.00036, P = 0.00036
Identities = 42/147 (28%), Positives = 64/147 (43%)
Query: 510 MCHVCG---DGENLLLCNGCPLAFHAACLDP--LLIPESGWRCP---NCRQGHSSSMSRS 561
+C VCG D LLLC+ C +++H CLDP L +P+ GW+C +C Q ++S
Sbjct: 982 VCEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVPKGGWKCKWCVSCMQCGAASPGFH 1041
Query: 562 VDLKGGLE--APGAEVGGCVICRLSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEF 619
+ + P A + C IC +P D+ +I C CE+
Sbjct: 1042 CEWQNSYTHCGPCASLVTCPICH-APYVEEDL-----------------LIQCRHCERWM 1083
Query: 620 HVGCLRKNGLCDLKEIPKDKWFCCDDC 646
H GC D+++ D+ F C C
Sbjct: 1084 HAGCESLFTEDDVEQAA-DEGFDCVSC 1109
>ZFIN|ZDB-GENE-080519-3 [details] [associations]
symbol:nsd1a "nuclear receptor binding SET domain
protein 1a" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0032259 "methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00570
Pfam:PF00855 ZFIN:ZDB-GENE-080519-3 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 KO:K15588
EMBL:CU633762 EMBL:CU655965 EMBL:CU659412 IPI:IPI00512787
RefSeq:XP_683890.4 UniGene:Dr.83733 Ensembl:ENSDART00000084114
GeneID:556086 KEGG:dre:556086 CTD:556086 NextBio:20881309
ArrayExpress:F1QA79 Bgee:F1QA79 Uniprot:F1QA79
Length = 2055
Score = 124 (48.7 bits), Expect = 0.00037, Sum P(3) = 0.00037
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 511 CHVCGDGENLLLCNGCPLAFHAACLDPLLIPESGWRCPNCRQG 553
C VC +G +LL C CP AFH CL+ + +P+ W C +CR G
Sbjct: 1393 CFVCSEGGSLLCCESCPAAFHRECLN-IEMPQGSWFCNDCRAG 1434
Score = 59 (25.8 bits), Expect = 0.00037, Sum P(3) = 0.00037
Identities = 16/61 (26%), Positives = 27/61 (44%)
Query: 605 DDRTVIYCDQ--CEKEFHVGCLRKNGLCDLKEIPKDKWFC----CDDCNRIHAALQDFVS 658
D ++ C + C K +H CL +L + P +W C C++C R A+ +
Sbjct: 1808 DGGQIVSCKKPGCPKVYHADCL------NLSKRPAGRWECPWHQCNECGREAASYCEMCP 1861
Query: 659 N 659
N
Sbjct: 1862 N 1862
Score = 50 (22.7 bits), Expect = 0.00037, Sum P(3) = 0.00037
Identities = 14/54 (25%), Positives = 27/54 (50%)
Query: 38 ESDSFPNGKHAKEEALNDDIKSEVSNPVVSPKEFTSSLQDITSQETKLVTESCN 91
ES+S N E +D S + +P +SP + +++++ + LV E C+
Sbjct: 701 ESESKVNN----ESMFSDTSSSSIPSPSISPMDAFQDIKELSFRS--LVKEECS 748
>UNIPROTKB|I3LTW9 [details] [associations]
symbol:MLL2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0043627 "response
to estrogen stimulus" evidence=IEA] [GO:0035097 "histone
methyltransferase complex" evidence=IEA] [GO:0033148 "positive
regulation of intracellular estrogen receptor signaling pathway"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00856 InterPro:IPR009071 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR003888 InterPro:IPR003889
InterPro:IPR019787 Pfam:PF00628 Pfam:PF05964 Pfam:PF05965
PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51542 PROSITE:PS51543
SMART:SM00249 SMART:SM00317 SMART:SM00541 SMART:SM00542
GO:GO:0046872 GO:GO:0008284 GO:GO:0008270 GO:GO:0045944
SMART:SM00398 SUPFAM:SSF47095 GO:GO:0044212 GO:GO:0043627
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0008168 GO:GO:0033148 InterPro:IPR003616
PROSITE:PS50868 GO:GO:0035097 GeneTree:ENSGT00690000101661
OMA:PPNLGFV EMBL:CU633660 EMBL:CU633656 Ensembl:ENSSSCT00000031953
Uniprot:I3LTW9
Length = 5114
Score = 135 (52.6 bits), Expect = 0.00037, P = 0.00037
Identities = 42/147 (28%), Positives = 64/147 (43%)
Query: 510 MCHVCG---DGENLLLCNGCPLAFHAACLDP--LLIPESGWRCP---NCRQGHSSSMSRS 561
+C VCG D LLLC+ C +++H CLDP L +P+ GW+C +C Q ++S
Sbjct: 1016 VCEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVPKGGWKCKWCVSCMQCGAASPGFH 1075
Query: 562 VDLKGGLE--APGAEVGGCVICRLSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEF 619
+ + P A + C IC +P D+ +I C CE+
Sbjct: 1076 CEWQNSYTHCGPCASLVTCPICH-APYVEEDL-----------------LIQCRHCERWM 1117
Query: 620 HVGCLRKNGLCDLKEIPKDKWFCCDDC 646
H GC D+++ D+ F C C
Sbjct: 1118 HAGCESLFTEDDVEQAA-DEGFDCVSC 1143
>UNIPROTKB|G3MZF2 [details] [associations]
symbol:MLL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008168 "methyltransferase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR009071
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR003888
InterPro:IPR003889 InterPro:IPR019787 Pfam:PF00628 Pfam:PF05964
Pfam:PF05965 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50280
PROSITE:PS51542 PROSITE:PS51543 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00541 SMART:SM00542 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 SMART:SM00398 SUPFAM:SSF47095
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0008168 InterPro:IPR003616 SMART:SM00508
PROSITE:PS50868 GeneTree:ENSGT00690000101661 EMBL:DAAA02012952
Ensembl:ENSBTAT00000063707 Uniprot:G3MZF2
Length = 5420
Score = 135 (52.6 bits), Expect = 0.00039, P = 0.00039
Identities = 42/147 (28%), Positives = 64/147 (43%)
Query: 510 MCHVCG---DGENLLLCNGCPLAFHAACLDP--LLIPESGWRCP---NCRQGHSSSMSRS 561
+C VCG D LLLC+ C +++H CLDP L +P+ GW+C +C Q ++S
Sbjct: 1366 VCEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVPKGGWKCKWCVSCMQCGAASPGFH 1425
Query: 562 VDLKGGLE--APGAEVGGCVICRLSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEF 619
+ + P A + C IC +P D+ +I C CE+
Sbjct: 1426 CEWQNSYTHCGPCASLVTCPICH-APYVEEDL-----------------LIQCRHCERWM 1467
Query: 620 HVGCLRKNGLCDLKEIPKDKWFCCDDC 646
H GC D+++ D+ F C C
Sbjct: 1468 HAGCESLFTEDDVEQAA-DEGFDCVSC 1493
>UNIPROTKB|E1B9N8 [details] [associations]
symbol:MLL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0043627 "response
to estrogen stimulus" evidence=IEA] [GO:0035097 "histone
methyltransferase complex" evidence=IEA] [GO:0033148 "positive
regulation of intracellular estrogen receptor signaling pathway"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF00856 InterPro:IPR009071
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR003888
InterPro:IPR003889 InterPro:IPR019787 Pfam:PF00628 Pfam:PF05964
Pfam:PF05965 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50280
PROSITE:PS51542 PROSITE:PS51543 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00541 SMART:SM00542 GO:GO:0046872
GO:GO:0008284 GO:GO:0008270 GO:GO:0045944 SMART:SM00398
SUPFAM:SSF47095 GO:GO:0044212 GO:GO:0043627 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0008168
GO:GO:0033148 InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GO:GO:0035097 GeneTree:ENSGT00690000101661 OMA:PPNLGFV
EMBL:DAAA02012952 IPI:IPI00685960 Ensembl:ENSBTAT00000019193
Uniprot:E1B9N8
Length = 5448
Score = 135 (52.6 bits), Expect = 0.00039, P = 0.00039
Identities = 42/147 (28%), Positives = 64/147 (43%)
Query: 510 MCHVCG---DGENLLLCNGCPLAFHAACLDP--LLIPESGWRCP---NCRQGHSSSMSRS 561
+C VCG D LLLC+ C +++H CLDP L +P+ GW+C +C Q ++S
Sbjct: 1394 VCEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVPKGGWKCKWCVSCMQCGAASPGFH 1453
Query: 562 VDLKGGLE--APGAEVGGCVICRLSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEF 619
+ + P A + C IC +P D+ +I C CE+
Sbjct: 1454 CEWQNSYTHCGPCASLVTCPICH-APYVEEDL-----------------LIQCRHCERWM 1495
Query: 620 HVGCLRKNGLCDLKEIPKDKWFCCDDC 646
H GC D+++ D+ F C C
Sbjct: 1496 HAGCESLFTEDDVEQAA-DEGFDCVSC 1521
>UNIPROTKB|O14686 [details] [associations]
symbol:MLL2 "Histone-lysine N-methyltransferase MLL2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0018024 "histone-lysine N-methyltransferase
activity" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0005634 "nucleus" evidence=NAS]
[GO:0003677 "DNA binding" evidence=NAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0033148 "positive
regulation of intracellular estrogen receptor signaling pathway"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0043627 "response to estrogen stimulus"
evidence=IDA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0051568 "histone H3-K4 methylation" evidence=ISS] [GO:0006342
"chromatin silencing" evidence=ISS] [GO:0001555 "oocyte growth"
evidence=ISS] [GO:0048477 "oogenesis" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=IPI] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR009071 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR003888 InterPro:IPR003889 InterPro:IPR019787
Pfam:PF00628 Pfam:PF05964 Pfam:PF05965 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50280 PROSITE:PS51542 PROSITE:PS51543
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00541
SMART:SM00542 Prosite:PS00518 GO:GO:0046872 GO:GO:0008284
GO:GO:0008270 GO:GO:0045944 GO:GO:0006351 SMART:SM00398
SUPFAM:SSF47095 GO:GO:0044212 GO:GO:0043627 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS01359 GO:GO:0006342 GO:GO:0033148 eggNOG:COG2940
GO:GO:0018024 InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GO:GO:0051568 GO:GO:0035097 EMBL:AC011603 GO:GO:0001555
Orphanet:2322 EMBL:AF010403 EMBL:AF010404 IPI:IPI00297859
IPI:IPI00377245 PIR:T03454 PIR:T03455 RefSeq:NP_003473.3
UniGene:Hs.731384 PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ
ProteinModelPortal:O14686 SMR:O14686 DIP:DIP-37875N IntAct:O14686
MINT:MINT-1192941 STRING:O14686 PhosphoSite:O14686 PaxDb:O14686
PRIDE:O14686 Ensembl:ENST00000301067 GeneID:8085 KEGG:hsa:8085
UCSC:uc001rta.4 CTD:8085 GeneCards:GC12M049412 HGNC:HGNC:7133
HPA:HPA035977 MIM:147920 MIM:602113 neXtProt:NX_O14686
PharmGKB:PA30846 HOVERGEN:HBG006738 InParanoid:O14686 KO:K09187
OMA:PPNLGFV ChiTaRS:MLL2 GenomeRNAi:8085 NextBio:30706
ArrayExpress:O14686 Bgee:O14686 CleanEx:HS_MLL2
Genevestigator:O14686 GermOnline:ENSG00000167548 Uniprot:O14686
Length = 5537
Score = 135 (52.6 bits), Expect = 0.00040, P = 0.00040
Identities = 42/147 (28%), Positives = 64/147 (43%)
Query: 510 MCHVCG---DGENLLLCNGCPLAFHAACLDP--LLIPESGWRCP---NCRQGHSSSMSRS 561
+C VCG D LLLC+ C +++H CLDP L +P+ GW+C +C Q ++S
Sbjct: 1429 VCEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVPKGGWKCKWCVSCMQCGAASPGFH 1488
Query: 562 VDLKGGLE--APGAEVGGCVICRLSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEF 619
+ + P A + C IC +P D+ +I C CE+
Sbjct: 1489 CEWQNSYTHCGPCASLVTCPICH-APYVEEDL-----------------LIQCRHCERWM 1530
Query: 620 HVGCLRKNGLCDLKEIPKDKWFCCDDC 646
H GC D+++ D+ F C C
Sbjct: 1531 HAGCESLFTEDDVEQAA-DEGFDCVSC 1556
>UNIPROTKB|E2RQ26 [details] [associations]
symbol:MLL2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR009071 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR003888 InterPro:IPR003889 InterPro:IPR019787
Pfam:PF00628 Pfam:PF05964 Pfam:PF05965 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50280 PROSITE:PS51542 PROSITE:PS51543
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00541
SMART:SM00542 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
SMART:SM00398 SUPFAM:SSF47095 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0008168 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00690000101661
EMBL:AAEX03015073 Ensembl:ENSCAFT00000013872 Uniprot:E2RQ26
Length = 5563
Score = 135 (52.6 bits), Expect = 0.00040, P = 0.00040
Identities = 42/147 (28%), Positives = 64/147 (43%)
Query: 510 MCHVCG---DGENLLLCNGCPLAFHAACLDP--LLIPESGWRCP---NCRQGHSSSMSRS 561
+C VCG D LLLC+ C +++H CLDP L +P+ GW+C +C Q ++S
Sbjct: 1422 VCEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVPKGGWKCKWCVSCMQCGAASPGFH 1481
Query: 562 VDLKGGLE--APGAEVGGCVICRLSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEF 619
+ + P A + C IC +P D+ +I C CE+
Sbjct: 1482 CEWQNSYTHCGPCASLVTCPICH-TPYVEEDL-----------------LIQCRHCERWM 1523
Query: 620 HVGCLRKNGLCDLKEIPKDKWFCCDDC 646
H GC D+++ D+ F C C
Sbjct: 1524 HAGCESLFTEDDVEQAA-DEGFDCVSC 1549
>UNIPROTKB|J9P0X8 [details] [associations]
symbol:MLL2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR009071 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR003888 InterPro:IPR003889 InterPro:IPR019787
Pfam:PF00628 Pfam:PF05964 Pfam:PF05965 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50280 PROSITE:PS51542 PROSITE:PS51543
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00541
SMART:SM00542 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
SMART:SM00398 SUPFAM:SSF47095 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0008168 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00690000101661
OMA:PPNLGFV EMBL:AAEX03015073 Ensembl:ENSCAFT00000045560
Uniprot:J9P0X8
Length = 5671
Score = 135 (52.6 bits), Expect = 0.00041, P = 0.00041
Identities = 42/147 (28%), Positives = 64/147 (43%)
Query: 510 MCHVCG---DGENLLLCNGCPLAFHAACLDP--LLIPESGWRCP---NCRQGHSSSMSRS 561
+C VCG D LLLC+ C +++H CLDP L +P+ GW+C +C Q ++S
Sbjct: 1527 VCEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVPKGGWKCKWCVSCMQCGAASPGFH 1586
Query: 562 VDLKGGLE--APGAEVGGCVICRLSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEF 619
+ + P A + C IC +P D+ +I C CE+
Sbjct: 1587 CEWQNSYTHCGPCASLVTCPICH-TPYVEEDL-----------------LIQCRHCERWM 1628
Query: 620 HVGCLRKNGLCDLKEIPKDKWFCCDDC 646
H GC D+++ D+ F C C
Sbjct: 1629 HAGCESLFTEDDVEQAA-DEGFDCVSC 1654
>ZFIN|ZDB-GENE-040426-2039 [details] [associations]
symbol:uhrf1 "ubiquitin-like, containing PHD and
RING finger domains, 1" species:7955 "Danio rerio" [GO:0042393
"histone binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0002088 "lens development in camera-type eye"
evidence=IMP] [GO:0031100 "organ regeneration" evidence=IMP]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0010216 "maintenance of DNA methylation" evidence=ISS;IMP]
[GO:0016574 "histone ubiquitination" evidence=ISS] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0005657 "replication fork" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0051865
"protein autoubiquitination" evidence=ISS] [GO:0000790 "nuclear
chromatin" evidence=ISS] [GO:0000791 "euchromatin" evidence=ISS]
[GO:0000792 "heterochromatin" evidence=ISS] [GO:0044729
"hemi-methylated DNA-binding" evidence=ISS] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000626 InterPro:IPR001965 InterPro:IPR003105
InterPro:IPR019787 Pfam:PF00240 Pfam:PF00628 Pfam:PF02182
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184
SMART:SM00213 SMART:SM00249 SMART:SM00466 UniPathway:UPA00143
Pfam:PF00097 Prosite:PS00299 Prosite:PS00518
ZFIN:ZDB-GENE-040426-2039 GO:GO:0005737 GO:GO:0046872 GO:GO:0031100
GO:GO:0008270 GO:GO:0006351 GO:GO:0000122 GO:GO:0007049
GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0004842 GO:GO:0035064 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR017907 GO:GO:0042787 GO:GO:0051865
GO:GO:0000792 GO:GO:0005657 GO:GO:0016574 GO:GO:0002088
GO:GO:0010216 Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0000791
KO:K10638 Gene3D:2.30.280.10 CTD:29128 GeneTree:ENSGT00390000008296
OMA:HVEPGLQ GO:GO:0044729 InterPro:IPR021991 Pfam:PF12148
EMBL:AY648713 EMBL:BX927276 EMBL:FP360035 EMBL:BC058055
IPI:IPI00497177 RefSeq:NP_998242.1 RefSeq:XP_003201004.1
UniGene:Dr.77703 PRIDE:E7EZF3 Ensembl:ENSDART00000012551
Ensembl:ENSDART00000121555 Ensembl:ENSDART00000122573
Ensembl:ENSDART00000126951 GeneID:100538017 GeneID:406350
KEGG:dre:100538017 KEGG:dre:406350 NextBio:20817968
ArrayExpress:E7EZF3 Bgee:E7EZF3 Uniprot:E7EZF3
Length = 776
Score = 126 (49.4 bits), Expect = 0.00041, P = 0.00041
Identities = 27/61 (44%), Positives = 34/61 (55%)
Query: 511 CHVCG---DGENLLLCNGCPLAFHAACLDPLL--IPES-GWRCPNCRQGHSSSMSRSVDL 564
CHVCG D + LLC+ C +AFH CL+P L IP+ W CP+CR S + L
Sbjct: 316 CHVCGIKQDPDKQLLCDECDMAFHTYCLNPPLTTIPDDEDWYCPDCRNDASEVVLAGEKL 375
Query: 565 K 565
K
Sbjct: 376 K 376
>MGI|MGI:1276545 [details] [associations]
symbol:Nsd1 "nuclear receptor-binding SET-domain protein 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0001702 "gastrulation with mouth forming second" evidence=IMP]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0003712
"transcription cofactor activity" evidence=ISO;IDA] [GO:0003714
"transcription corepressor activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0005694 "chromosome" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=ISO] [GO:0010452 "histone H3-K36
methylation" evidence=ISO] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016571 "histone methylation" evidence=IDA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=IPI]
[GO:0018024 "histone-lysine N-methyltransferase activity"
evidence=IEA] [GO:0030331 "estrogen receptor binding" evidence=IPI]
[GO:0032259 "methylation" evidence=IEA] [GO:0035097 "histone
methyltransferase complex" evidence=IC] [GO:0042054 "histone
methyltransferase activity" evidence=IDA] [GO:0042799 "histone
methyltransferase activity (H4-K20 specific)" evidence=IDA]
[GO:0042974 "retinoic acid receptor binding" evidence=IPI]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0046965 "retinoid X receptor binding" evidence=IPI] [GO:0046966
"thyroid hormone receptor binding" evidence=IPI] [GO:0046975
"histone methyltransferase activity (H3-K36 specific)"
evidence=ISO;IDA] [GO:0050681 "androgen receptor binding"
evidence=ISO] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00570
EMBL:AF064553 MGI:MGI:1276545 Pfam:PF00855 GO:GO:0003714
GO:GO:0005694 GO:GO:0045893 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0003682 GO:GO:0000122 UniGene:Mm.12964
GO:GO:0001702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0050681 eggNOG:COG2940 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GO:GO:0042799 InterPro:IPR000313
PROSITE:PS50812 SMART:SM00293 GO:GO:0046975 GO:GO:0035097
HOGENOM:HOG000113857 HOVERGEN:HBG007518 OrthoDB:EOG49GKFN
ChiTaRS:NSD1 EMBL:AK082820 EMBL:AK004485 IPI:IPI00131111 PIR:T14342
UniGene:Mm.168965 ProteinModelPortal:O88491 SMR:O88491
STRING:O88491 PhosphoSite:O88491 PaxDb:O88491 PRIDE:O88491
UCSC:uc007qqd.1 CleanEx:MM_NSD1 Genevestigator:O88491
GermOnline:ENSMUSG00000021488 Uniprot:O88491
Length = 2588
Score = 130 (50.8 bits), Expect = 0.00045, Sum P(3) = 0.00045
Identities = 24/57 (42%), Positives = 32/57 (56%)
Query: 511 CHVCGDGENLLLCNGCPLAFHAACLDPLLIPESGWRCPNCRQGHSSSMSRSVDLKGG 567
C VC +G +LL C+ CP AFH CL+ + IPE W C +C+ G V +K G
Sbjct: 1608 CFVCSEGGSLLCCDSCPAAFHRECLN-IDIPEGNWYCNDCKAGKKPHYREIVWVKVG 1663
Score = 53 (23.7 bits), Expect = 0.00045, Sum P(3) = 0.00045
Identities = 15/50 (30%), Positives = 22/50 (44%)
Query: 605 DDRTVIYCDQ--CEKEFHVGCLRKNGLCDLKEIPKDKWFC----CDDCNR 648
D ++ C + C K +H CL +L + P KW C CD C +
Sbjct: 2024 DAGQLVSCKKPGCPKVYHADCL------NLTKRPAGKWECPWHQCDVCGK 2067
Score = 52 (23.4 bits), Expect = 0.00045, Sum P(3) = 0.00045
Identities = 28/127 (22%), Positives = 47/127 (37%)
Query: 14 GEMDVECSSRTESKQDREL-LTDNVESDSFPN---GKHAKEEALNDDIKSEVSNPVVSPK 69
GE+ SS K REL + S+ P G+ L + I +++ P V+PK
Sbjct: 885 GELSSSLSSLASDK--RELPACGKIRSNCIPRRNCGRAKPSSKLRETISAQMVKPSVNPK 942
Query: 70 EFTSSLQDITSQETKLVTESCNQVLSTTSTGNLSSEETLSDGDERTESSYAETSRTDNNS 129
+ + S+ VT + N+ L +G+++ D E + N
Sbjct: 943 ALKTERKRKFSR-LPAVTLAANR-LGNKESGSVNGPSRGGAEDPGKEEPLQQMDLLRNED 1000
Query: 130 GDVSKSH 136
S H
Sbjct: 1001 THFSDVH 1007
>UNIPROTKB|F1NW66 [details] [associations]
symbol:Gga.49064 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0035097 "histone methyltransferase complex" evidence=IEA]
[GO:0042800 "histone methyltransferase activity (H3-K4 specific)"
evidence=IEA] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR009071
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR003888
InterPro:IPR003889 InterPro:IPR019787 Pfam:PF00628 Pfam:PF05964
Pfam:PF05965 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51542
PROSITE:PS51543 SMART:SM00184 SMART:SM00249 SMART:SM00317
SMART:SM00541 SMART:SM00542 Pfam:PF00505 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 SMART:SM00398 SUPFAM:SSF47095
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0008168 InterPro:IPR003616 SMART:SM00508
PROSITE:PS50868 GO:GO:0051568 GeneTree:ENSGT00690000101661
OMA:VDPYERP EMBL:AADN02000310 EMBL:AADN02000311 EMBL:AADN02000312
IPI:IPI00593571 Ensembl:ENSGALT00000010124 Uniprot:F1NW66
Length = 4880
Score = 143 (55.4 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 50/210 (23%), Positives = 86/210 (40%)
Query: 483 TSNGMTLHDIAISLAMGQRRTTGGSDDMCHVC------GDGENLLLCNGCPLAFHAACLD 536
T+ G H + + + + + G C VC G+ +L+C+ C +H CL
Sbjct: 308 TTCGQHYHGMCLDIQVTPLKRAGWQCPDCKVCQNCKHSGEDNKMLVCDTCDKGYHTFCLQ 367
Query: 537 PLL--IPESGWRCPNCRQGHSSSMSRSVDLKGGLEAPGAEVGGCVICRLSPSENFDIRLC 594
P++ +P +GW+C NCR V + G C++C S + D C
Sbjct: 368 PVMDSVPTNGWKCKNCR----------VCAECGTRTSCQWHHNCLVCD-SCYQQQDNLSC 416
Query: 595 RSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFCCDDCNRIHA-AL 653
D + +++C C++ H+ C R G+ +L+ KD + C C +
Sbjct: 417 PFCDKLCLQDFQKDMLHCHMCKRWIHMECDRSPGI-ELESQLKD--YICTLCKQGEGDQT 473
Query: 654 QDF-VSNRAQTIP--ASSLSTINRKHIEKG 680
Q V + ++ IP AS N +E G
Sbjct: 474 QSCDVMDTSELIPEPASIAGCTNEMEMESG 503
Score = 48 (22.0 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 20/70 (28%), Positives = 32/70 (45%)
Query: 22 SRTESKQDRELLTDNVESDSFPNG--KHAKEEALNDDIKSEVSNPVVSPKEFTSSLQDIT 79
SR ++ + E D +E+ N KE++ +D + EV S K+ T LQ
Sbjct: 3 SRGKTAVEDEDSMDGLEAAETENTVETEVKEQSAEEDAQVEVD----STKQLTPVLQRSV 58
Query: 80 SQETKLVTES 89
S+E+ T S
Sbjct: 59 SEESASSTAS 68
>UNIPROTKB|F1LPP7 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 IPI:IPI00369880
Ensembl:ENSRNOT00000057060 Uniprot:F1LPP7
Length = 2020
Score = 143 (55.4 bits), Expect = 0.00048, Sum P(3) = 0.00047
Identities = 36/118 (30%), Positives = 51/118 (43%)
Query: 509 DMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQGHSSSMSRSVDLKG 566
D C VC G ++LC+ CP A+H CLDP L PE W CP+C + + + +
Sbjct: 432 DYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEK--EGVQWEAKEEEE 489
Query: 567 GLEAPGAEVGGCVICRLSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEFHVGCL 624
E G E G E+ + CR D ++ CD C +H+ CL
Sbjct: 490 DYEEEGEE-GE------KEEEDDHMEYCR------VCKDGGELLCCDACISSYHIHCL 534
Score = 46 (21.3 bits), Expect = 0.00048, Sum P(3) = 0.00047
Identities = 15/57 (26%), Positives = 27/57 (47%)
Query: 376 TGREQTHMKEMLEERKRGVKRPFMHQKRTAEGGTKKRDNDLHRLLFLPNGLPDGERL 432
TG + ++ E+R++ KR ++ +GG K+ + L L GL D E +
Sbjct: 148 TGPGRKRRRKHREKREKKTKR---RKRGEGDGGHKQVEQKSSATLLLTWGLEDVEHV 201
Score = 42 (19.8 bits), Expect = 0.00048, Sum P(3) = 0.00047
Identities = 10/40 (25%), Positives = 20/40 (50%)
Query: 23 RTESKQDRELLTDNVESDSFPNGKHAKEE--ALNDDIKSE 60
R E +++ E++ E + G +EE A ++D + E
Sbjct: 2 RDEEEEEEEMVVSEEEEEEEEEGDEEEEEVEAADEDDEEE 41
>UNIPROTKB|Q8NEZ4 [details] [associations]
symbol:MLL3 "Histone-lysine N-methyltransferase MLL3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=IDA] [GO:0042800 "histone
methyltransferase activity (H3-K4 specific)" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0051568 "histone
H3-K4 methylation" evidence=IDA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR009071 InterPro:IPR000637 InterPro:IPR001214
InterPro:IPR001594 InterPro:IPR001965 InterPro:IPR002219
InterPro:IPR003888 InterPro:IPR003889 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 Pfam:PF05964 Pfam:PF05965
PROSITE:PS00354 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50216
PROSITE:PS50280 PROSITE:PS51542 PROSITE:PS51543 SMART:SM00109
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00384
SMART:SM00541 SMART:SM00542 GO:GO:0006355 GO:GO:0035556
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
SMART:SM00398 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359 eggNOG:COG2940
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868 GO:GO:0042800
GO:GO:0035097 EMBL:AC005631 EMBL:AC006017 EMBL:AY024361
EMBL:AF264750 EMBL:AC104692 EMBL:AB040939 EMBL:AK022687
EMBL:AK075113 EMBL:AL833924 IPI:IPI00168806 IPI:IPI00375729
IPI:IPI00916332 RefSeq:NP_733751.2 UniGene:Hs.647120 PDB:2YSM
PDB:2YUK PDB:3UVL PDB:4ERY PDBsum:2YSM PDBsum:2YUK PDBsum:3UVL
PDBsum:4ERY ProteinModelPortal:Q8NEZ4 SMR:Q8NEZ4 DIP:DIP-48649N
IntAct:Q8NEZ4 STRING:Q8NEZ4 PhosphoSite:Q8NEZ4 DMDM:221222521
PaxDb:Q8NEZ4 PRIDE:Q8NEZ4 Ensembl:ENST00000262189
Ensembl:ENST00000355193 GeneID:58508 KEGG:hsa:58508 UCSC:uc003wky.3
UCSC:uc003wla.3 CTD:58508 GeneCards:GC07M151832 H-InvDB:HIX0007238
H-InvDB:HIX0016202 H-InvDB:HIX0080234 HGNC:HGNC:13726 MIM:606833
neXtProt:NX_Q8NEZ4 PharmGKB:PA30847 HOVERGEN:HBG045586
InParanoid:Q8NEZ4 KO:K09188 OMA:VDPYERP PhylomeDB:Q8NEZ4
ChiTaRS:MLL3 EvolutionaryTrace:Q8NEZ4 GenomeRNAi:58508
NextBio:65023 ArrayExpress:Q8NEZ4 Bgee:Q8NEZ4 CleanEx:HS_MLL3
Genevestigator:Q8NEZ4 GermOnline:ENSG00000055609 Uniprot:Q8NEZ4
Length = 4911
Score = 132 (51.5 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 40/147 (27%), Positives = 63/147 (42%)
Query: 510 MCHVCG---DGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNC---RQGHSSSMSRS 561
+C CG D LLLC+ C +++H CLDP L +P+ GW+C C R ++S
Sbjct: 1009 VCEACGKATDPGRLLLCDDCDISYHTYCLDPPLQTVPKGGWKCKWCVWCRHCGATSAGLR 1068
Query: 562 VDLKGGLE--APGAEVGGCVICRLSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEF 619
+ + AP A + C +C N+ R D ++ C QC++
Sbjct: 1069 CEWQNNYTQCAPCASLSSCPVCY----RNY-----REEDL---------ILQCRQCDRWM 1110
Query: 620 HVGCLRKNGLCDLKEIPKDKWFCCDDC 646
H C N +++ + D F C C
Sbjct: 1111 HAVCQNLNTEEEVENVA-DIGFDCSMC 1136
Score = 59 (25.8 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 22/82 (26%), Positives = 38/82 (46%)
Query: 70 EFTSSLQDITSQETKLVTESCNQVLSTTSTGNLS-SEETLSDGDERTESSYAETSRTDNN 128
E ++ L D S+ T + E C + +S ++ S ET S + S A+ S +
Sbjct: 731 ELSTGLMD--SEMTPTI-EGCVKDVSYQGGKSIKLSSETESSFSSSADISKADVSSSPTP 787
Query: 129 SGDVSKSHVVLEIPKHVSSSSG 150
S D+ ++ P +SSS+G
Sbjct: 788 SSDLPSHDMLHNYPSALSSSAG 809
>UNIPROTKB|J9P5P6 [details] [associations]
symbol:MLL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] Pfam:PF00856 InterPro:IPR009071
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR003888
InterPro:IPR003889 InterPro:IPR019787 Pfam:PF00628 Pfam:PF05964
Pfam:PF05965 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51542
PROSITE:PS51543 SMART:SM00249 SMART:SM00317 SMART:SM00541
SMART:SM00542 Pfam:PF00505 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 SMART:SM00398 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0008168 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00690000101661
EMBL:AAEX03010288 EMBL:AAEX03010289 Ensembl:ENSCAFT00000046455
Uniprot:J9P5P6
Length = 4265
Score = 133 (51.9 bits), Expect = 0.00050, P = 0.00050
Identities = 39/147 (26%), Positives = 64/147 (43%)
Query: 510 MCHVCG---DGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNC---RQGHSSSMSRS 561
+C CG D LLLC+ C +++H CL P L +P+ GW+C C R ++S
Sbjct: 378 VCEACGKASDPGRLLLCDDCDISYHTYCLAPPLQTVPKGGWKCKWCVWCRHCGATSAGLR 437
Query: 562 VDLKGGLE--APGAEVGGCVICRLSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEF 619
+ + AP A + C +C CR++ +D ++ C QC++
Sbjct: 438 CEWQNNYTQCAPCASLSSCPVC------------CRNYR------EDDLILQCRQCDRWM 479
Query: 620 HVGCLRKNGLCDLKEIPKDKWFCCDDC 646
H C N +++ + D F C C
Sbjct: 480 HAVCQNLNTEEEVENVA-DIGFDCSMC 505
>UNIPROTKB|F1M7Q0 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR
IPI:IPI00959834 Ensembl:ENSRNOT00000012983 Uniprot:F1M7Q0
Length = 2054
Score = 143 (55.4 bits), Expect = 0.00050, Sum P(3) = 0.00050
Identities = 36/118 (30%), Positives = 51/118 (43%)
Query: 509 DMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQGHSSSMSRSVDLKG 566
D C VC G ++LC+ CP A+H CLDP L PE W CP+C + + + +
Sbjct: 432 DYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEK--EGVQWEAKEEEE 489
Query: 567 GLEAPGAEVGGCVICRLSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEFHVGCL 624
E G E G E+ + CR D ++ CD C +H+ CL
Sbjct: 490 DYEEEGEE-GE------KEEEDDHMEYCR------VCKDGGELLCCDACISSYHIHCL 534
Score = 46 (21.3 bits), Expect = 0.00050, Sum P(3) = 0.00050
Identities = 15/57 (26%), Positives = 27/57 (47%)
Query: 376 TGREQTHMKEMLEERKRGVKRPFMHQKRTAEGGTKKRDNDLHRLLFLPNGLPDGERL 432
TG + ++ E+R++ KR ++ +GG K+ + L L GL D E +
Sbjct: 148 TGPGRKRRRKHREKREKKTKR---RKRGEGDGGHKQVEQKSSATLLLTWGLEDVEHV 201
Score = 42 (19.8 bits), Expect = 0.00050, Sum P(3) = 0.00050
Identities = 10/40 (25%), Positives = 20/40 (50%)
Query: 23 RTESKQDRELLTDNVESDSFPNGKHAKEE--ALNDDIKSE 60
R E +++ E++ E + G +EE A ++D + E
Sbjct: 2 RDEEEEEEEMVVSEEEEEEEEEGDEEEEEVEAADEDDEEE 41
>TAIR|locus:2040184 [details] [associations]
symbol:PKL "PICKLE" species:3702 "Arabidopsis thaliana"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003678 "DNA helicase activity" evidence=ISS] [GO:0016568
"chromatin modification" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009736 "cytokinin
mediated signaling pathway" evidence=IMP] [GO:0009733 "response to
auxin stimulus" evidence=IMP] [GO:2000023 "regulation of lateral
root development" evidence=IMP] [GO:0009788 "negative regulation of
abscisic acid mediated signaling pathway" evidence=IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0016246 "RNA interference" evidence=RCA] [GO:0008283 "cell
proliferation" evidence=IMP] [GO:0009739 "response to gibberellin
stimulus" evidence=IMP] [GO:0048364 "root development"
evidence=IMP] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 Prosite:PS00518 GO:GO:0005524 GO:GO:0005634
GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009733
GO:GO:0046872 GO:GO:0003677 GO:GO:0008283 GO:GO:0008270
GO:GO:0016568 GO:GO:0048364 GO:GO:0009739 GO:GO:0009788
GO:GO:0009736 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
PROSITE:PS00598 HOGENOM:HOG000231124 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
EMBL:AF185578 EMBL:AF185577 EMBL:AK229409 IPI:IPI00521160
PIR:T52301 RefSeq:NP_565587.1 UniGene:At.11745
ProteinModelPortal:Q9S775 SMR:Q9S775 STRING:Q9S775 PaxDb:Q9S775
PRIDE:Q9S775 EnsemblPlants:AT2G25170.1 GeneID:817055
KEGG:ath:AT2G25170 TAIR:At2g25170 InParanoid:Q9S775 OMA:NVVMYFG
PhylomeDB:Q9S775 ProtClustDB:CLSN2688404 Genevestigator:Q9S775
GermOnline:AT2G25170 GO:GO:2000023 Uniprot:Q9S775
Length = 1384
Score = 128 (50.1 bits), Expect = 0.00050, P = 0.00050
Identities = 23/49 (46%), Positives = 27/49 (55%)
Query: 504 TGGSDDMCHVCGDGENLLLCNGCPLAFHAACLDPLLIPES--GWRCPNC 550
T ++ C CG+ NL+ CN C AFHA CL P L S WRCP C
Sbjct: 45 TDAKENACQACGESTNLVSCNTCTYAFHAKCLVPPLKDASVENWRCPEC 93
>UNIPROTKB|F1LM99 [details] [associations]
symbol:F1LM99 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000253 InterPro:IPR001965 InterPro:IPR008984
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016
SMART:SM00249 GO:GO:0017053 GO:GO:0046872 GO:GO:0008270
Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035091 GO:GO:0001106
GO:GO:0016580 OMA:MSSQAQG GeneTree:ENSGT00440000033777
IPI:IPI00369959 Ensembl:ENSRNOT00000056234 ArrayExpress:F1LM99
Uniprot:F1LM99
Length = 1003
Score = 115 (45.5 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 22/61 (36%), Positives = 31/61 (50%)
Query: 509 DMCHVCGDGENLLLCNGCPLAFHAACLDPLL----IPESGWRCPNCRQGHSSSMSRSVDL 564
D C C +G +LL C+ CP AFH C +P L +P W C C +S ++S L
Sbjct: 57 DSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTVRRKASRTQSAKL 116
Query: 565 K 565
+
Sbjct: 117 R 117
Score = 62 (26.9 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 18/75 (24%), Positives = 32/75 (42%)
Query: 609 VIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFCCDDCNRIHAALQDF-VSNRAQTIPAS 667
+I CD C FH+ CL L +P +W C + + ++ +SNR +
Sbjct: 285 LIQCDYCPLLFHMDCLEP----PLTAMPLGRWMCPNHIEHVVLNQKNLTLSNRCRVFDGF 340
Query: 668 SLSTINRKHIEKGIL 682
TI++ ++ L
Sbjct: 341 Q-DTISQHAVKVDFL 354
>RGD|1565602 [details] [associations]
symbol:Kdm5b "lysine (K)-specific demethylase 5B" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=ISO] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA;ISO] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=IEA;ISO] [GO:0034720 "histone
H3-K4 demethylation" evidence=ISO] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
RGD:1565602 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063118 GO:GO:0034647
OrthoDB:EOG4HT8RC IPI:IPI00554242 Ensembl:ENSRNOT00000006290
UCSC:RGD:1565602 Uniprot:D3ZUT4
Length = 1546
Score = 117 (46.2 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 510 MCHVCGDG---ENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNC 550
+C +CG G + LLLC+GC ++H CL P L +P+ WRCP C
Sbjct: 313 VCLLCGSGNDEDRLLLCDGCDDSYHTFCLLPPLHDVPKGDWRCPKC 358
Score = 64 (27.6 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 17/66 (25%), Positives = 29/66 (43%)
Query: 583 LSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFC 642
LSP+++ + ++C + AT +I C+ C FH C+ + + I W C
Sbjct: 1170 LSPAQDVETKVCLCQK-TPAT----PMIQCELCRDAFHTSCVAVSSISQSSRI----WLC 1220
Query: 643 CDDCNR 648
C R
Sbjct: 1221 -PHCRR 1225
>UNIPROTKB|F1MFF9 [details] [associations]
symbol:Bt.62145 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:DAAA02043090 IPI:IPI00688794
Ensembl:ENSBTAT00000010688 Uniprot:F1MFF9
Length = 1852
Score = 150 (57.9 bits), Expect = 0.00054, Sum P(3) = 0.00054
Identities = 35/118 (29%), Positives = 51/118 (43%)
Query: 509 DMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQGHSSSMSRSVDLKG 566
D C VC G ++LC+ CP A+H CLDP L PE W CP+C + + +
Sbjct: 289 DYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEK-------EGIQWEP 341
Query: 567 GLEAPGAEVGGCVICRLSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEFHVGCL 624
+ + GGC E+ + CR D ++ CD C +H+ CL
Sbjct: 342 KDDDDDEDEGGC-----EEEEDDHMEFCR------VCKDGGELLCCDACPSSYHLHCL 388
Score = 41 (19.5 bits), Expect = 0.00054, Sum P(3) = 0.00054
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 24 TESKQDRELLTDNVESDSFPNGKHAKEEALND 55
+E+++D E +++ SD PN K K++ L D
Sbjct: 6 SENEEDLEEKSESEGSDYSPNKK--KKKKLKD 35
Score = 38 (18.4 bits), Expect = 0.00054, Sum P(3) = 0.00054
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 95 STTSTGNLSSEETLSDGDERTESSYAETS 123
S G+ S S+ DER ES + S
Sbjct: 213 SKRKKGSSVSASVSSEEDEREESDFDSAS 241
>MGI|MGI:2444959 [details] [associations]
symbol:Mll3 "myeloid/lymphoid or mixed-lineage leukemia 3"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016571 "histone methylation"
evidence=IDA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0018022 "peptidyl-lysine methylation" evidence=ISO] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0032259 "methylation" evidence=IEA] [GO:0035097 "histone
methyltransferase complex" evidence=ISO] [GO:0035556 "intracellular
signal transduction" evidence=IEA] [GO:0042800 "histone
methyltransferase activity (H3-K4 specific)" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051568 "histone
H3-K4 methylation" evidence=ISO] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR009071 InterPro:IPR000637 InterPro:IPR001214
InterPro:IPR001594 InterPro:IPR001965 InterPro:IPR002219
InterPro:IPR003888 InterPro:IPR003889 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 Pfam:PF05964 Pfam:PF05965
PROSITE:PS00354 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50216
PROSITE:PS50280 PROSITE:PS51542 PROSITE:PS51543 SMART:SM00109
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00384
SMART:SM00541 SMART:SM00542 MGI:MGI:2444959 GO:GO:0006355
GO:GO:0035556 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 SMART:SM00398 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359 eggNOG:COG2940
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868 GO:GO:0042800
GO:GO:0035097 HOVERGEN:HBG045586 ChiTaRS:MLL3 EMBL:AY138582
EMBL:AC116469 EMBL:AC127319 EMBL:AC134910 EMBL:AK044828
EMBL:AK054270 EMBL:AK077567 EMBL:AY036886 EMBL:AY036887
IPI:IPI00620674 IPI:IPI00623069 UniGene:Mm.332268
ProteinModelPortal:Q8BRH4 SMR:Q8BRH4 IntAct:Q8BRH4 STRING:Q8BRH4
PhosphoSite:Q8BRH4 PaxDb:Q8BRH4 PRIDE:Q8BRH4 UCSC:uc008wsv.1
HOGENOM:HOG000113602 InParanoid:Q8BRH4 OrthoDB:EOG4THVS4
Bgee:Q8BRH4 CleanEx:MM_MLL3 Genevestigator:Q8BRH4
GermOnline:ENSMUSG00000038056 Uniprot:Q8BRH4
Length = 4903
Score = 137 (53.3 bits), Expect = 0.00057, Sum P(3) = 0.00057
Identities = 39/147 (26%), Positives = 65/147 (44%)
Query: 510 MCHVCG---DGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNC---RQGHSSSMSRS 561
+C CG D LLLC+ C +++H CLDP L +P+ GW+C C R ++S
Sbjct: 1002 VCEACGKATDPGRLLLCDDCDISYHTYCLDPPLQTVPKGGWKCKWCVWCRHCGATSAGLR 1061
Query: 562 VDLKGGLE--APGAEVGGCVICRLSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEF 619
+ + AP A + C +C CR++ ++ ++ C QC++
Sbjct: 1062 CEWQNNYTQCAPCASLSSCPVC------------CRNYR------EEDLILQCRQCDRWM 1103
Query: 620 HVGCLRKNGLCDLKEIPKDKWFCCDDC 646
H C N +++ + D F C C
Sbjct: 1104 HAVCQNLNTEEEVENVA-DIGFDCSMC 1129
Score = 61 (26.5 bits), Expect = 0.00057, Sum P(3) = 0.00057
Identities = 20/84 (23%), Positives = 38/84 (45%)
Query: 35 DNVESDSFPNGKHAKEEALNDDIKSEVSNPVVSPKEFTSSLQDIT-SQETKLVTESCNQV 93
D +++ G+H EE N+D N V P + +D+ S+++++ ++ +
Sbjct: 622 DTEKTEMLSKGRHVCEEDQNEDRMEVTENIEVLPHQTIVPQEDLLLSEDSEVASKELSPP 681
Query: 94 LSTTSTGNLSSEETLSDGDERTES 117
S T + E LS ER+ S
Sbjct: 682 KSAPETA--APEALLSPHSERSLS 703
Score = 44 (20.5 bits), Expect = 0.00057, Sum P(3) = 0.00057
Identities = 27/105 (25%), Positives = 44/105 (41%)
Query: 633 KEIPKDKWFCCDDCNRIHA-ALQDFVSNRAQTIPASSLSTINRKHIEKGILFDGTMNDVQ 691
K + KD FC ++C +++ A Q S+ +++P SL K K F N++
Sbjct: 4222 KRMEKDIVFCSNNCFILYSSAAQAKNSDNKESLP--SLPQSPMKEPSKA--FHQYSNNIS 4277
Query: 692 WQMLKKAQCFEEKEKSLLSSATAIFRECFDPIIAECGRDLIPVMV 736
+ F+EK S +S F F+ E D + V V
Sbjct: 4278 TLDVHCLPQFQEKV-SPPASPPISFPPAFEAAKVESKPDELKVTV 4321
>UNIPROTKB|J9NVX7 [details] [associations]
symbol:NSD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 EMBL:AAEX03002967
EMBL:AAEX03002968 EMBL:AAEX03002969 EMBL:AAEX03002970
Ensembl:ENSCAFT00000045272 Uniprot:J9NVX7
Length = 2429
Score = 130 (50.8 bits), Expect = 0.00058, Sum P(3) = 0.00058
Identities = 24/57 (42%), Positives = 32/57 (56%)
Query: 511 CHVCGDGENLLLCNGCPLAFHAACLDPLLIPESGWRCPNCRQGHSSSMSRSVDLKGG 567
C VC +G +LL C+ CP AFH CL+ + IPE W C +C+ G V +K G
Sbjct: 1442 CFVCSEGGSLLCCDSCPAAFHRECLN-IDIPEGNWYCNDCKAGKKPHYREIVWVKVG 1497
Score = 53 (23.7 bits), Expect = 0.00058, Sum P(3) = 0.00058
Identities = 15/50 (30%), Positives = 22/50 (44%)
Query: 605 DDRTVIYCDQ--CEKEFHVGCLRKNGLCDLKEIPKDKWFC----CDDCNR 648
D ++ C + C K +H CL +L + P KW C CD C +
Sbjct: 1858 DAGQLVSCKKPGCPKVYHADCL------NLTKRPAGKWECPWHQCDICGK 1901
Score = 50 (22.7 bits), Expect = 0.00058, Sum P(3) = 0.00058
Identities = 20/84 (23%), Positives = 36/84 (42%)
Query: 334 GLVEHDEKHNMKLPSLPHS-IISCSSLALEESISPTSCSFVQDTGREQTHMKEMLEERKR 392
GLV ++ ++ S HS ++ + + S SF GR + K + ERKR
Sbjct: 728 GLVS--DRRDVPASSKSHSDCVTRRNCGRSKPSSKLRDSFAAQMGRNTLNRKALKTERKR 785
Query: 393 GVKR-PFMHQKRTAEGGTKKRDND 415
+ R P + + +G D++
Sbjct: 786 KLSRLPAVTLEAALQGDRVSGDSE 809
>MGI|MGI:1922855 [details] [associations]
symbol:Kdm5b "lysine (K)-specific demethylase 5B"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=ISO] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=IDA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=ISO] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=ISO] [GO:0034720 "histone H3-K4
demethylation" evidence=ISO;IDA] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 MGI:MGI:1922855 GO:GO:0003714 GO:GO:0045892
GO:GO:0005730 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GeneTree:ENSGT00530000063118
GO:GO:0034647 KO:K11446 HOGENOM:HOG000290719 CTD:10765
OrthoDB:EOG4HT8RC OMA:CENEKEM EMBL:AY082429 EMBL:AY082430
EMBL:AK220451 EMBL:BC048180 EMBL:BC057318 EMBL:AK041304
IPI:IPI00330824 IPI:IPI00776332 RefSeq:NP_690855.2 UniGene:Mm.28995
UniGene:Mm.391994 PDB:2EQY PDBsum:2EQY ProteinModelPortal:Q80Y84
SMR:Q80Y84 IntAct:Q80Y84 STRING:Q80Y84 PhosphoSite:Q80Y84
PRIDE:Q80Y84 Ensembl:ENSMUST00000047714 Ensembl:ENSMUST00000112198
GeneID:75605 KEGG:mmu:75605 UCSC:uc007csg.2 UCSC:uc011wsg.1
InParanoid:Q80Y84 EvolutionaryTrace:Q80Y84 NextBio:343484
Bgee:Q80Y84 Genevestigator:Q80Y84 Uniprot:Q80Y84
Length = 1544
Score = 118 (46.6 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 510 MCHVCGDG---ENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNC 550
+C +CG G + LLLC+GC ++H CL P L +P+ WRCP C
Sbjct: 311 VCLLCGSGNDEDRLLLCDGCDDSYHTFCLVPPLHDVPKGDWRCPKC 356
Score = 62 (26.9 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 17/66 (25%), Positives = 28/66 (42%)
Query: 583 LSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFC 642
LSP ++ ++++C + AT +I C+ C FH C+ + I W C
Sbjct: 1168 LSPVQDLEMKVCLCQK-TPAT----PMIQCELCRDAFHTSCVAAPSISQSSRI----WLC 1218
Query: 643 CDDCNR 648
C R
Sbjct: 1219 -PHCRR 1223
>UNIPROTKB|H0YCN2 [details] [associations]
symbol:RSF1 "Remodeling and spacing factor 1" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 EMBL:AP000580
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 EMBL:AP000609
EMBL:AP002343 HGNC:HGNC:18118 ChiTaRS:RSF1 Ensembl:ENST00000526324
Bgee:H0YCN2 Uniprot:H0YCN2
Length = 803
Score = 108 (43.1 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 508 DDMCHVCG---DGENLLLCNGCPLAFHAACLDP--LLIPESGWRCPNCR 551
D+ C CG E +LLC+ C +H ACL P ++IP+ W CP C+
Sbjct: 692 DEPCKKCGLPNHPELILLCDSCDSGYHTACLRPPLMIIPDGEWFCPPCQ 740
Score = 66 (28.3 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 42/177 (23%), Positives = 71/177 (40%)
Query: 8 LEVPADGEMD-VECSSRTESKQD-RELLTDNVESDSFPNGKHAK------EEALNDDIKS 59
+E P E + +E +S + E T+ E++ N + AK E L+DD S
Sbjct: 141 MEKPVAQEPERIEFGGNIKSSHEITEKSTE--ETEKLKNDQQAKIPLKKREIKLSDDFDS 198
Query: 60 EVSNPVVSPKEFTSSLQDITSQETKLVTESCNQVLSTTSTGNLSSEETLSD-GDERTESS 118
V P+ K T + ++ E K E+C ++ + T+ G+ + + DER +
Sbjct: 199 PVKGPLC--KSVTPT-KEFLKDEIKQEEETCKRISTITALGHEGKQLVNGEVSDERVAPN 255
Query: 119 YA----ETS--RTDNNSGDVSKSHVVLEIPKHVSSSSGIRKITFKFSKRKEDYVAPL 169
+ ET T S SK ++ S + + IT + E APL
Sbjct: 256 FKTEPIETKFYETKEESYSPSKDRNIITEGNGTESLNSV--ITSMKTGELEKETAPL 310
>UNIPROTKB|F1MMY4 [details] [associations]
symbol:WHSC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060348 "bone development" evidence=IEA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003290 "atrial septum secundum morphogenesis" evidence=IEA]
[GO:0003289 "atrial septum primum morphogenesis" evidence=IEA]
[GO:0003149 "membranous septum morphogenesis" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR009071 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855 Pfam:PF00505
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0031965
GO:GO:0003682 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0003289 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0060348 GO:GO:0018024
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 GO:GO:0003149 GO:GO:0003290 OMA:DVKRCVV
EMBL:DAAA02018575 IPI:IPI00714897 Ensembl:ENSBTAT00000010497
Uniprot:F1MMY4
Length = 1368
Score = 121 (47.7 bits), Expect = 0.00065, Sum P(3) = 0.00065
Identities = 22/55 (40%), Positives = 29/55 (52%)
Query: 499 GQRRTTGGSDDMCHVCGDGENLLLCNGCPLAFHAACLDPLLIPESGWRCPNCRQG 553
G+R + C VC G +LL C CP AFH CL + +P+ W C +CR G
Sbjct: 825 GKRHHAHVNVSWCFVCSKGGSLLCCESCPAAFHPDCLS-IEMPDGSWFCNDCRAG 878
Score = 64 (27.6 bits), Expect = 0.00065, Sum P(3) = 0.00065
Identities = 20/61 (32%), Positives = 27/61 (44%)
Query: 605 DDRTVIYCDQ--CEKEFHVGCLRKNGLCDLKEIPKDKWFC----CDDCNRIHAALQDFVS 658
D ++ CD+ C K +H+ CL GL + P KW C CD C + A F
Sbjct: 1250 DGGQLVLCDRKSCTKAYHLPCL---GL---GKRPFGKWECPWHHCDVCGKPSTAFCHFCP 1303
Query: 659 N 659
N
Sbjct: 1304 N 1304
Score = 40 (19.1 bits), Expect = 0.00065, Sum P(3) = 0.00065
Identities = 21/77 (27%), Positives = 33/77 (42%)
Query: 86 VTESCNQVLSTTSTGNLSSEETLSDGDERTESSYAETSRTDNNSGDVSK--SHVVLEIPK 143
V E+ + L T G L ET++D RT S A + + S +K S + K
Sbjct: 544 VEEAPRKRLRTDRHG-LRKRETITDKTARTTSCKALEAASSLKSQAATKHLSDACKPLKK 602
Query: 144 -HVSSSSGIRKITFKFS 159
H + ++ +TF S
Sbjct: 603 RHRAPAAAATTLTFSKS 619
>MGI|MGI:2682319 [details] [associations]
symbol:Mll2 "myeloid/lymphoid or mixed-lineage leukemia 2"
species:10090 "Mus musculus" [GO:0001555 "oocyte growth"
evidence=IMP] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0005634 "nucleus" evidence=IEA] [GO:0006342
"chromatin silencing" evidence=IMP] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISO] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0018024 "histone-lysine N-methyltransferase activity"
evidence=IEA] [GO:0032259 "methylation" evidence=IEA] [GO:0033148
"positive regulation of intracellular estrogen receptor signaling
pathway" evidence=ISO] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043627 "response to estrogen stimulus"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0048477
"oogenesis" evidence=IMP] [GO:0051568 "histone H3-K4 methylation"
evidence=IMP] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR009071
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR003888
InterPro:IPR003889 InterPro:IPR019787 Pfam:PF00628 Pfam:PF05964
Pfam:PF05965 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50280
PROSITE:PS51542 PROSITE:PS51543 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00541 SMART:SM00542 MGI:MGI:2682319
Prosite:PS00518 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0001701 GO:GO:0006351 SMART:SM00398 SUPFAM:SSF47095
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0006342 eggNOG:COG2940
GO:GO:0018024 InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GO:GO:0051568 GO:GO:0001555 GeneTree:ENSGT00690000101661
ChiTaRS:MLL2 EMBL:AC161165 EMBL:BC058659 IPI:IPI00381244
UniGene:Mm.264889 ProteinModelPortal:Q6PDK2 SMR:Q6PDK2
IntAct:Q6PDK2 STRING:Q6PDK2 PhosphoSite:Q6PDK2 PaxDb:Q6PDK2
PRIDE:Q6PDK2 Ensembl:ENSMUST00000023741 HOGENOM:HOG000168503
InParanoid:Q6PDK2 OrthoDB:EOG4T4CTJ NextBio:401486 Bgee:Q6PDK2
Genevestigator:Q6PDK2 Uniprot:Q6PDK2
Length = 5588
Score = 133 (51.9 bits), Expect = 0.00066, P = 0.00066
Identities = 42/149 (28%), Positives = 64/149 (42%)
Query: 510 MCHVCG---DGENLLLCNGCPLAFHAACLDP--LLIPESGWRCP---NCRQGHSSSMSRS 561
+C VCG D LLLC+ C +++H CLDP L +P+ GW+C +C Q ++S
Sbjct: 1385 VCEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVPKGGWKCKWCVSCMQCGAASPGFH 1444
Query: 562 VDLKGGLE--APGAEVGGCVICRLSPSENFDIRLCRSHDFSAATFDDRTVIYCDQCEKEF 619
+ + P A + C +C +P D+ +I C CE+
Sbjct: 1445 CEWQNSYTHCGPCASLVTCPVCH-APYVEEDL-----------------LIQCRHCERWM 1486
Query: 620 HVGCLRKNGLCDLKEIPK--DKWFCCDDC 646
H GC L E+ + D+ F C C
Sbjct: 1487 HAGC---ESLFTEDEVEQAADEGFDCVSC 1512
>UNIPROTKB|F1SJU8 [details] [associations]
symbol:PHF21B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 OMA:SDKQALG
GeneTree:ENSGT00530000063984 EMBL:CU633627
Ensembl:ENSSSCT00000000021 Uniprot:F1SJU8
Length = 450
Score = 121 (47.7 bits), Expect = 0.00066, P = 0.00066
Identities = 22/47 (46%), Positives = 27/47 (57%)
Query: 508 DDMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQ 552
D+ C C G NL C CP A+H +CLDP L P+ W CP C+Q
Sbjct: 271 DEHCATCKRGANLQPCGTCPGAYHLSCLDPPLKTAPKGVWVCPKCQQ 317
>UNIPROTKB|K7EQP5 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 EMBL:AC024267 HGNC:HGNC:20816
Ensembl:ENST00000583747 Uniprot:K7EQP5
Length = 117
Score = 98 (39.6 bits), Expect = 0.00067, P = 0.00067
Identities = 18/43 (41%), Positives = 23/43 (53%)
Query: 509 DMCHVCGDGENLLLCNGCPLAFHAACLDPLL----IPESGWRC 547
D C C +G +LL C+ CP AFH C +P L +P W C
Sbjct: 75 DSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMC 117
>UNIPROTKB|H0YMU7 [details] [associations]
symbol:MLL3 "Histone-lysine N-methyltransferase MLL3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016571 "histone methylation" evidence=IEA] InterPro:IPR001841
InterPro:IPR000637 InterPro:IPR001594 InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00354
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50216 SMART:SM00184
SMART:SM00249 SMART:SM00384 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0016571 EMBL:AC005631
EMBL:AC006017 EMBL:AC104692 HGNC:HGNC:13726 ChiTaRS:MLL3
EMBL:AC006474 ProteinModelPortal:H0YMU7 SMR:H0YMU7
Ensembl:ENST00000558084 Bgee:H0YMU7 Uniprot:H0YMU7
Length = 826
Score = 131 (51.2 bits), Expect = 0.00067, Sum P(3) = 0.00067
Identities = 40/182 (21%), Positives = 78/182 (42%)
Query: 483 TSNGMTLHDIAISLAMGQRRTTGGSDDMCHVC------GDGENLLLCNGCPLAFHAACLD 536
T+ G H + + +A+ + G C VC G+ +L+C+ C +H CL
Sbjct: 360 TTCGQHYHGMCLDIAVTPLKRAGWQCPECKVCQNCKQSGEDSKMLVCDTCDKGYHTFCLQ 419
Query: 537 PLL--IPESGWRCPNCRQGHSSSMSRSVDLKGGLEAPGAEVGGCVICRLSPSENFDIRLC 594
P++ +P +GW+C NCR + ++ G + C+IC + D LC
Sbjct: 420 PVMKSVPTNGWKCKNCR----------ICIECGTRSSSQWHHNCLICDNCYQQQ-D-NLC 467
Query: 595 RSHDFSAATFD---DRTVIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFCCDDCNRIHA 651
F + + +++C+ C++ H+ C + +L K+++ C C + A
Sbjct: 468 ---PFCGKCYHPELQKDMLHCNMCKRWVHLECDKPTDH-ELDTQLKEEYICMY-CKHLGA 522
Query: 652 AL 653
+
Sbjct: 523 EM 524
Score = 43 (20.2 bits), Expect = 0.00067, Sum P(3) = 0.00067
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 684 DGTMNDVQWQMLKKAQCFEEKEKSLLSSA 712
+G + DV +Q K + E E S SSA
Sbjct: 746 EGCVKDVSYQGGKSIKLSSETESSFSSSA 774
Score = 43 (20.2 bits), Expect = 0.00067, Sum P(3) = 0.00067
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 49 KEEALNDDIKSEVSNPVVSPKEFTSSLQDITSQET 83
KE++ +D ++EV N K+ +LQ S+E+
Sbjct: 86 KEQSAEEDAEAEVDNS----KQLIPTLQRSVSEES 116
>UNIPROTKB|E2QUJ0 [details] [associations]
symbol:WHSC1L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 OMA:MEKDIHK
EMBL:AAEX03010393 Ensembl:ENSCAFT00000009828 Uniprot:E2QUJ0
Length = 1438
Score = 104 (41.7 bits), Expect = 0.00070, Sum P(3) = 0.00070
Identities = 40/137 (29%), Positives = 57/137 (41%)
Query: 501 RRTTGGS--DDMCHVC-GDGENLLLCNG-CPLAFHAACLDPLLIPESGWRCPNCRQGHSS 556
RR G S D +C +C G++L+ C G C FH CL +P+ + C C+ G
Sbjct: 691 RRGIGVSKKDTVCQICESSGDSLIPCEGECCKHFHLECLGLASVPDGKFICIECKTGQHP 750
Query: 557 SMSRSVDLKGGLEAPGAEVGGC-----VIC-RLSPSENFDIR--LCRSHDFSAATFDDRT 608
S V G + VG C C R P+ F+ + C H SA + +
Sbjct: 751 CFSCKVS---GTDVKRCSVGACGKFYHEACVRKFPTAIFESKGFRCPQHCCSACSMEKD- 806
Query: 609 VIYCDQCEKEFHVGCLR 625
IY + K + CLR
Sbjct: 807 -IY--KASKGRMMRCLR 820
Score = 63 (27.2 bits), Expect = 0.00070, Sum P(3) = 0.00070
Identities = 29/106 (27%), Positives = 44/106 (41%)
Query: 28 QDRELLTDNVESD--SFPNGKHAKEE---ALNDDIKSEVSNPVVSPKEFTSSLQDITSQE 82
Q E T N+ S+ S P G K++ ++ +SE S VV K+ + Q
Sbjct: 550 QRNEKATQNISSEATSGPTGSVEKKQQRRSIRTRSESEKSTEVVPKKKIKKEQVETVPQA 609
Query: 83 T-KLVTESCNQVLSTTSTGNLSSEETLSDGDERTESSYAETSRTDN 127
T K + +S S L S E T S+Y +TS +D+
Sbjct: 610 TVKTGLQKGASEISD-SCKPLKKRSRASTDVEMTSSAYRDTSDSDS 654
Score = 59 (25.8 bits), Expect = 0.00070, Sum P(3) = 0.00070
Identities = 51/235 (21%), Positives = 92/235 (39%)
Query: 609 VIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFCCDDCN---RIH------AALQDFVSN 659
++ C+ C FH CL E+P+ W C +DC ++H L ++
Sbjct: 923 LLCCESCPASFHPECLSI-------EMPEGCWNC-NDCKAGKKLHYKQIVWVKLGNYRWW 974
Query: 660 RAQTI-PAS-SLSTINRKHIEKG---ILFDGTMNDVQWQMLKKAQCFEEKEKSLLSSATA 714
A+ P S L+ KH + G + F G+ +D W + + E +KS T+
Sbjct: 975 PAEICNPRSVPLNIQGLKH-DLGDFPVFFFGS-HDYYWVHQGRVFPYVEGDKSFAEGQTS 1032
Query: 715 IFRECFDPIIAECGRDLIPVMVYGRNISGQEFGGMYSVILTVKSVVVSA--GLLRIFGRE 772
I + F + E + + + E K + + G ++I +
Sbjct: 1033 I-NKTFKKALEEAAKRFQELKAQRESREALEIEKNSRKPPPYKHIKANKVIGKVQIHVAD 1091
Query: 773 VAELPLVATCREYQGKGCFQALFS-CIERLLCSLNVENLVLPAAEKAES-IWTKK 825
++E+P C+ C L S C+ R+L V PA E+ ++ +TK+
Sbjct: 1092 LSEIPR-CNCKPADENPC--GLESECLNRML-QYECHPQVCPAGERCQNQCFTKR 1142
>UNIPROTKB|F1M4B8 [details] [associations]
symbol:Phf14 "Protein Phf14" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 IPI:IPI00566375 Ensembl:ENSRNOT00000007707
RGD:1563764 ArrayExpress:F1M4B8 Uniprot:F1M4B8
Length = 924
Score = 99 (39.9 bits), Expect = 0.00071, Sum P(4) = 0.00071
Identities = 24/64 (37%), Positives = 32/64 (50%)
Query: 511 CHVCG---DGENLLLCNGCPLAFHAACLDPLL--IPE----SGWRCPNCRQGHSSSMSRS 561
C +C D LLLC+ C L +H CLDP L +P S W+C C Q SS M
Sbjct: 719 CGICKKNHDQHLLLLCDTCKLHYHLGCLDPPLTRMPRKTKNSYWQCSECDQAGSSDMEAE 778
Query: 562 VDLK 565
+ ++
Sbjct: 779 MAME 782
Score = 67 (28.6 bits), Expect = 0.00071, Sum P(4) = 0.00071
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 603 TFDDRTVIYCDQCEKEFHVGCLRKNGLCDLKEIPKDK---WFC--CD 644
T ++ ++ CD+C +H GCL LK+ PK W C CD
Sbjct: 868 TGENENLVRCDECRLCYHFGCLDP----PLKKSPKQTGYGWICQECD 910
Score = 58 (25.5 bits), Expect = 0.00071, Sum P(4) = 0.00071
Identities = 32/152 (21%), Positives = 57/152 (37%)
Query: 35 DNVESDSFPNGKHAKEEALNDDIKSEVSNPVVSPKEFTSSLQDITSQETKLVTESCNQVL 94
D+ E + ++ EE LN+DIK + S +E SS + + E K E+ +
Sbjct: 51 DSGEGSCSDSEENILEEELNEDIKVKEEQLRNSTEEIMSSDKQLIKMEKKEEEENGERPR 110
Query: 95 STTSTGNLSSEETLSDGDERTESSYAETSRTDNNSGDVSKSHVVLEIPKHVSSS----SG 150
+E D ++ T S A S + +P +SS S
Sbjct: 111 KRKEKEKEKEKEREKDKEKATVSDSAAASAAGTTPATSPPAVTSPAVPTTTTSSEEQVSE 170
Query: 151 IRKITFKFSKRKEDYVAPLAYEEGRNYTLYDD 182
+K + ++ D+V+ + +Y DD
Sbjct: 171 PKKWNLRRNRPLLDFVSMEELNDMDDYDSEDD 202
Score = 37 (18.1 bits), Expect = 0.00071, Sum P(4) = 0.00071
Identities = 6/11 (54%), Positives = 7/11 (63%)
Query: 453 CDCCNKEISPS 463
CD C +SPS
Sbjct: 365 CDACKCGVSPS 375
>POMBASE|SPAC16C9.05 [details] [associations]
symbol:cph1 "Clr6 histone deacetylase associated PHD
protein-1 Cph1" species:4896 "Schizosaccharomyces pombe"
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IPI]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016575 "histone deacetylation" evidence=ISO]
[GO:0019787 "small conjugating protein ligase activity"
evidence=ISM] [GO:0032221 "Rpd3S complex" evidence=IDA] [GO:0071276
"cellular response to cadmium ion" evidence=IMP] [GO:0071585
"detoxification of cadmium ion" evidence=IMP] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
PomBase:SPAC16C9.05 GO:GO:0005829 EMBL:CU329670 GO:GO:0046872
GO:GO:0071276 GO:GO:0071585 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006368
InterPro:IPR019786 PROSITE:PS01359 eggNOG:NOG317492 GO:GO:0019787
GO:GO:0016575 GO:GO:0032221 PIR:T37778 RefSeq:NP_593079.1
ProteinModelPortal:Q09819 STRING:Q09819 EnsemblFungi:SPAC16C9.05.1
GeneID:2542318 KEGG:spo:SPAC16C9.05 OrthoDB:EOG4N6053
NextBio:20803379 Uniprot:Q09819
Length = 404
Score = 120 (47.3 bits), Expect = 0.00072, P = 0.00072
Identities = 24/56 (42%), Positives = 31/56 (55%)
Query: 500 QRRTTGGSDDMCHVCGDGENLLLC-NGCPLAFHAACLDPLL----IPESGWRCPNC 550
+R+ T + D C CG G L +C GCP +FH +CL+P L IPE W C C
Sbjct: 109 RRKATIRNVDYCSACG-GRGLFICCEGCPCSFHLSCLEPPLTPENIPEGSWFCVTC 163
>POMBASE|SPAC2F7.07c [details] [associations]
symbol:cph2 "Clr6 histone deacetylase associated PHD
protein-2 Cph2" species:4896 "Schizosaccharomyces pombe"
[GO:0005634 "nucleus" evidence=IDA] [GO:0005819 "spindle"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016575 "histone
deacetylation" evidence=ISO] [GO:0019787 "small conjugating protein
ligase activity" evidence=ISM] [GO:0032221 "Rpd3S complex"
evidence=IDA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 PomBase:SPAC2F7.07c EMBL:CU329670
GO:GO:0005819 GO:GO:0046872 GO:GO:0008270 GO:GO:0006338
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0019787
GO:GO:0016575 GO:GO:0032221 eggNOG:NOG145066 OrthoDB:EOG4TQQJV
PIR:T38555 RefSeq:NP_592978.1 ProteinModelPortal:Q09698
DIP:DIP-29347N STRING:Q09698 EnsemblFungi:SPAC2F7.07c.1
GeneID:2541422 KEGG:spo:SPAC2F7.07c NextBio:20802526 Uniprot:Q09698
Length = 607
Score = 117 (46.2 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 28/102 (27%), Positives = 46/102 (45%)
Query: 507 SDDMCHVCGDGENLLLCNGCPLAFHAACLDPLL----IPESGWRCPNCRQGHS--SSMSR 560
++D C C N L C CP +FH C+DP + +P+ W C C+ HS + +
Sbjct: 262 NNDYCSACHGPGNFLCCETCPNSFHFTCIDPPIEEKNLPDDAWYCNECKH-HSLYNELDE 320
Query: 561 SVDLKGGLEAPGAEVGGCV-ICRLSPSENFDIRLCRSHDFSA 601
+L+ ++ G V + +C S N I+ H S+
Sbjct: 321 QEELESNVKEEGTMVDVWMQLCTYIDSHN-PIQFHLPHSISS 361
Score = 53 (23.7 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 17/53 (32%), Positives = 24/53 (45%)
Query: 593 LC-RSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLCDLKEIPKD--KWFC 642
LC R H SA ++++ CD C +H CL L +P + KW C
Sbjct: 408 LCFRCHK-SALV--SQSILACDYCNSYWHPDCLNP----PLATLPSNLRKWKC 453
>UNIPROTKB|C9J9G2 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AC024267 HGNC:HGNC:20816
HOGENOM:HOG000220810 ChiTaRS:PHF12 IPI:IPI00952567
ProteinModelPortal:C9J9G2 STRING:C9J9G2 Ensembl:ENST00000378879
UCSC:uc002hdh.1 ArrayExpress:C9J9G2 Uniprot:C9J9G2
Length = 705
Score = 105 (42.0 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 19/46 (41%), Positives = 24/46 (52%)
Query: 509 DMCHVCGDGENLLLCNGCPLAFHAACLDPLL----IPESGWRCPNC 550
D C C +G +LL C+ CP AFH C +P L +P W C C
Sbjct: 57 DSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC 102
Score = 67 (28.6 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 19/72 (26%), Positives = 32/72 (44%)
Query: 609 VIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFCCDDCNRIHAALQDF-VSNRAQTIPAS 667
+I CD C FH+ CL L +P +W C + + ++ +SNR Q
Sbjct: 286 LIQCDYCPLLFHMDCLEP----PLTAMPLGRWMCPNHIEHVVLNQKNMTLSNRCQVFDRF 341
Query: 668 SLSTINRKHIEK 679
T+++ H+ K
Sbjct: 342 Q-DTVSQ-HVVK 351
>UNIPROTKB|E1BM66 [details] [associations]
symbol:NSD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050681 "androgen receptor binding" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0001702
"gastrulation with mouth forming second" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] Pfam:PF00856
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280
PROSITE:PS51215 SMART:SM00249 SMART:SM00317 SMART:SM00570
Pfam:PF00855 GO:GO:0005634 GO:GO:0045893 GO:GO:0046872
GO:GO:0008270 GO:GO:0003682 GO:GO:0001702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0003712
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 OMA:NIDKMRH EMBL:DAAA02020051 EMBL:DAAA02020048
EMBL:DAAA02020049 EMBL:DAAA02020050 IPI:IPI00716946
Ensembl:ENSBTAT00000034204 Uniprot:E1BM66
Length = 2698
Score = 130 (50.8 bits), Expect = 0.00079, Sum P(3) = 0.00079
Identities = 24/57 (42%), Positives = 32/57 (56%)
Query: 511 CHVCGDGENLLLCNGCPLAFHAACLDPLLIPESGWRCPNCRQGHSSSMSRSVDLKGG 567
C VC +G +LL C+ CP AFH CL+ + IPE W C +C+ G V +K G
Sbjct: 1713 CFVCSEGGSLLCCDSCPAAFHRECLN-IDIPEGNWYCNDCKAGKKPHYREIVWVKVG 1768
Score = 53 (23.7 bits), Expect = 0.00079, Sum P(3) = 0.00079
Identities = 15/50 (30%), Positives = 22/50 (44%)
Query: 605 DDRTVIYCDQ--CEKEFHVGCLRKNGLCDLKEIPKDKWFC----CDDCNR 648
D ++ C + C K +H CL +L + P KW C CD C +
Sbjct: 2129 DAGQLVSCKKPGCPKVYHADCL------NLTKRPAGKWECPWHQCDICGK 2172
Score = 50 (22.7 bits), Expect = 0.00079, Sum P(3) = 0.00079
Identities = 19/86 (22%), Positives = 42/86 (48%)
Query: 24 TESKQDRELLTDNVESDSFPNGKHAKEEALND--DIKSEVSNPVVSPKEFTSSLQDITSQ 81
T ++ R + +N+ + F +G + ++A N+ I + ++ P +P F S +
Sbjct: 520 THKEERRGKIPENLGLN-FISGDVSDKQASNELSRIANSLTGPSTAPGSFLFSSCAKNTA 578
Query: 82 ETKLVTESCNQVLSTTSTGNLSSEET 107
+ + T +C+ +L S G L S+ +
Sbjct: 579 KKEFETSNCDSLLGL-SEGALISKRS 603
>UNIPROTKB|E2R3Q9 [details] [associations]
symbol:NSD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 CTD:64324
KO:K15588 OMA:NIDKMRH EMBL:AAEX03002967 EMBL:AAEX03002968
EMBL:AAEX03002969 EMBL:AAEX03002970 RefSeq:XP_865778.1
Ensembl:ENSCAFT00000026110 GeneID:489094 KEGG:cfa:489094
Uniprot:E2R3Q9
Length = 2698
Score = 130 (50.8 bits), Expect = 0.00079, Sum P(3) = 0.00079
Identities = 24/57 (42%), Positives = 32/57 (56%)
Query: 511 CHVCGDGENLLLCNGCPLAFHAACLDPLLIPESGWRCPNCRQGHSSSMSRSVDLKGG 567
C VC +G +LL C+ CP AFH CL+ + IPE W C +C+ G V +K G
Sbjct: 1711 CFVCSEGGSLLCCDSCPAAFHRECLN-IDIPEGNWYCNDCKAGKKPHYREIVWVKVG 1766
Score = 53 (23.7 bits), Expect = 0.00079, Sum P(3) = 0.00079
Identities = 15/50 (30%), Positives = 22/50 (44%)
Query: 605 DDRTVIYCDQ--CEKEFHVGCLRKNGLCDLKEIPKDKWFC----CDDCNR 648
D ++ C + C K +H CL +L + P KW C CD C +
Sbjct: 2127 DAGQLVSCKKPGCPKVYHADCL------NLTKRPAGKWECPWHQCDICGK 2170
Score = 50 (22.7 bits), Expect = 0.00079, Sum P(3) = 0.00079
Identities = 20/84 (23%), Positives = 36/84 (42%)
Query: 334 GLVEHDEKHNMKLPSLPHS-IISCSSLALEESISPTSCSFVQDTGREQTHMKEMLEERKR 392
GLV ++ ++ S HS ++ + + S SF GR + K + ERKR
Sbjct: 997 GLVS--DRRDVPASSKSHSDCVTRRNCGRSKPSSKLRDSFAAQMGRNTLNRKALKTERKR 1054
Query: 393 GVKR-PFMHQKRTAEGGTKKRDND 415
+ R P + + +G D++
Sbjct: 1055 KLSRLPAVTLEAALQGDRVSGDSE 1078
>UNIPROTKB|F1S8S0 [details] [associations]
symbol:WHSC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060348 "bone development" evidence=IEA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003290 "atrial septum secundum morphogenesis" evidence=IEA]
[GO:0003289 "atrial septum primum morphogenesis" evidence=IEA]
[GO:0003149 "membranous septum morphogenesis" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR009071 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855 Pfam:PF00505
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0031965
GO:GO:0003682 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0003289 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0060348 GO:GO:0018024
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 GO:GO:0003149 GO:GO:0003290 OMA:DVKRCVV EMBL:FP102229
EMBL:FP102127 Ensembl:ENSSSCT00000009499 Uniprot:F1S8S0
Length = 1361
Score = 122 (48.0 bits), Expect = 0.00080, Sum P(3) = 0.00080
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 499 GQRRTTGGSDDMCHVCGDGENLLLCNGCPLAFHAACLDPLLIPESGWRCPNCRQG 553
G+R + C VC G +LL C CP AFH CL+ + +P+ W C +CR G
Sbjct: 818 GKRHHAHVNVSWCFVCSKGGSLLCCESCPAAFHPDCLN-IEMPDGSWFCNDCRAG 871
Score = 65 (27.9 bits), Expect = 0.00080, Sum P(3) = 0.00080
Identities = 21/71 (29%), Positives = 29/71 (40%)
Query: 595 RSHDFSAATFDDRTVIYCDQ--CEKEFHVGCLRKNGLCDLKEIPKDKWFC----CDDCNR 648
RS D D ++ CD+ C K +H+ CL L + P KW C CD C +
Sbjct: 1233 RSEDECFRCGDGGQLVLCDRKSCTKAYHLPCL------GLGKRPFGKWECPWHHCDVCGK 1286
Query: 649 IHAALQDFVSN 659
+ F N
Sbjct: 1287 PSTSFCHFCPN 1297
Score = 37 (18.1 bits), Expect = 0.00080, Sum P(3) = 0.00080
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 95 STTSTGNLSSEETL-SDGDERTESSYAETSRTDNNSGDVSK 134
S++ + +L+ E S GDE ES T + SK
Sbjct: 612 SSSPSASLTENEVSDSPGDEPLESPDESADETQTEASVSSK 652
>UNIPROTKB|F1NX82 [details] [associations]
symbol:PHF21B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 OMA:SDKQALG
GeneTree:ENSGT00530000063984 EMBL:AADN02006727 IPI:IPI00584515
Ensembl:ENSGALT00000022994 Uniprot:F1NX82
Length = 447
Score = 120 (47.3 bits), Expect = 0.00085, P = 0.00085
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 508 DDMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQ 552
D+ C C G NL C CP A+H CLDP L P+ W CP C+Q
Sbjct: 266 DEYCTACKRGVNLQPCGTCPRAYHLNCLDPPLKTAPKGVWVCPKCQQ 312
>UNIPROTKB|H7C212 [details] [associations]
symbol:MLL3 "Histone-lysine N-methyltransferase MLL3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 EMBL:AC005631 EMBL:AC006017 EMBL:AC104692
HGNC:HGNC:13726 ChiTaRS:MLL3 EMBL:AC006474
ProteinModelPortal:H7C212 Ensembl:ENST00000418673 Uniprot:H7C212
Length = 228
Score = 114 (45.2 bits), Expect = 0.00095, P = 0.00095
Identities = 20/46 (43%), Positives = 28/46 (60%)
Query: 510 MCHVCG---DGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNC 550
+C CG D LLLC+ C +++H CLDP L +P+ GW+C C
Sbjct: 165 VCEACGKATDPGRLLLCDDCDISYHTYCLDPPLQTVPKGGWKCKWC 210
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.401 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 863 863 0.00084 122 3 11 22 0.40 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 121
No. of states in DFA: 624 (66 KB)
Total size of DFA: 445 KB (2210 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 85.16u 0.12s 85.28t Elapsed: 00:00:04
Total cpu time: 85.18u 0.12s 85.30t Elapsed: 00:00:04
Start: Fri May 10 04:16:05 2013 End: Fri May 10 04:16:09 2013
WARNINGS ISSUED: 1