Query 002955
Match_columns 863
No_of_seqs 648 out of 3682
Neff 7.6
Searched_HMMs 46136
Date Thu Mar 28 14:08:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002955.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002955hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02205 alpha,alpha-trehalose 100.0 8E-193 2E-197 1724.8 89.1 846 1-846 1-850 (854)
2 PLN03064 alpha,alpha-trehalose 100.0 3E-159 6E-164 1422.0 81.5 747 58-846 93-932 (934)
3 PLN03063 alpha,alpha-trehalose 100.0 2E-151 4E-156 1367.5 82.4 749 56-847 8-790 (797)
4 PRK14501 putative bifunctional 100.0 4E-142 8E-147 1291.0 82.8 720 59-842 1-725 (726)
5 KOG1050 Trehalose-6-phosphate 100.0 4E-132 8E-137 1161.4 60.9 728 58-838 2-731 (732)
6 PRK10117 trehalose-6-phosphate 100.0 9E-122 2E-126 1031.7 49.2 455 59-550 2-456 (474)
7 TIGR02398 gluc_glyc_Psyn gluco 100.0 7E-120 1E-124 1028.3 48.8 463 64-547 1-482 (487)
8 PF00982 Glyco_transf_20: Glyc 100.0 2E-120 4E-125 1036.4 33.9 467 60-547 2-474 (474)
9 COG0380 OtsA Trehalose-6-phosp 100.0 6E-115 1E-119 969.7 44.1 467 54-548 10-480 (486)
10 TIGR02400 trehalose_OtsA alpha 100.0 1E-107 2E-112 935.3 48.8 454 60-546 1-455 (456)
11 cd03788 GT1_TPS Trehalose-6-Ph 100.0 4.4E-98 9E-103 862.3 51.8 459 60-545 1-459 (460)
12 TIGR02468 sucrsPsyn_pln sucros 100.0 3.6E-34 7.7E-39 345.0 46.1 542 201-796 312-994 (1050)
13 COG1877 OtsB Trehalose-6-phosp 100.0 2.2E-32 4.7E-37 287.4 22.3 249 579-845 5-256 (266)
14 PF02358 Trehalose_PPase: Treh 100.0 1.9E-33 4.1E-38 297.1 13.2 227 596-831 1-235 (235)
15 TIGR00685 T6PP trehalose-phosp 100.0 1E-31 2.3E-36 285.3 24.8 237 590-841 1-243 (244)
16 PRK10187 trehalose-6-phosphate 100.0 3.5E-31 7.7E-36 284.1 27.2 234 592-846 14-249 (266)
17 PLN03017 trehalose-phosphatase 100.0 5.9E-31 1.3E-35 287.0 27.7 249 581-846 101-364 (366)
18 PLN02151 trehalose-phosphatase 100.0 1E-30 2.2E-35 284.5 27.1 243 588-846 94-350 (354)
19 PLN02580 trehalose-phosphatase 100.0 1.3E-30 2.9E-35 287.0 26.3 242 585-845 112-381 (384)
20 COG0561 Cof Predicted hydrolas 99.9 6.3E-26 1.4E-30 244.0 23.1 226 590-842 1-262 (264)
21 PRK10513 sugar phosphate phosp 99.9 1E-25 2.3E-30 243.1 23.4 225 590-841 1-268 (270)
22 PRK15126 thiamin pyrimidine py 99.9 9.9E-26 2.2E-30 243.6 22.2 224 592-842 2-263 (272)
23 PRK10976 putative hydrolase; P 99.9 7.8E-26 1.7E-30 243.6 20.1 223 592-841 2-264 (266)
24 PRK01158 phosphoglycolate phos 99.9 1.6E-24 3.5E-29 228.1 21.2 216 590-841 1-229 (230)
25 PRK03669 mannosyl-3-phosphogly 99.9 2.2E-24 4.7E-29 233.0 20.8 236 591-843 6-270 (271)
26 PLN02887 hydrolase family prot 99.9 4.7E-24 1E-28 248.5 25.0 230 584-841 301-579 (580)
27 cd03792 GT1_Trehalose_phosphor 99.9 8.9E-24 1.9E-28 238.5 23.1 301 175-547 63-371 (372)
28 PF08282 Hydrolase_3: haloacid 99.9 1.4E-23 3.1E-28 222.3 22.5 216 595-837 1-254 (254)
29 PRK10530 pyridoxal phosphate ( 99.9 1.3E-23 2.7E-28 226.9 21.7 222 590-841 1-271 (272)
30 TIGR01484 HAD-SF-IIB HAD-super 99.9 4.5E-24 9.7E-29 220.6 17.3 195 594-800 1-202 (204)
31 PLN02939 transferase, transfer 99.9 2.8E-22 6.1E-27 239.0 30.1 318 179-549 591-968 (977)
32 PRK15484 lipopolysaccharide 1, 99.9 2.4E-22 5.2E-27 227.7 28.2 269 200-547 100-377 (380)
33 PLN02316 synthase/transferase 99.9 6.9E-22 1.5E-26 240.0 29.8 308 178-549 689-1035(1036)
34 PRK00654 glgA glycogen synthas 99.9 3.4E-22 7.5E-27 232.3 26.1 293 201-548 120-463 (466)
35 TIGR02472 sucr_P_syn_N sucrose 99.9 3.5E-22 7.6E-27 230.7 25.4 314 178-545 94-438 (439)
36 PRK14098 glycogen synthase; Pr 99.9 2.9E-22 6.4E-27 233.2 24.4 320 176-548 119-486 (489)
37 TIGR00099 Cof-subfamily Cof su 99.9 1.4E-22 3E-27 217.1 19.3 217 594-837 1-256 (256)
38 TIGR01482 SPP-subfamily Sucros 99.9 1.4E-22 3E-27 212.5 18.6 210 595-840 1-224 (225)
39 TIGR01487 SPP-like sucrose-pho 99.9 2.3E-22 4.9E-27 209.7 19.3 207 592-837 1-215 (215)
40 TIGR02095 glgA glycogen/starch 99.9 1.1E-21 2.3E-26 228.9 25.3 291 201-546 130-471 (473)
41 PRK14099 glycogen synthase; Pr 99.9 1.9E-21 4.1E-26 226.3 26.8 298 196-550 132-481 (485)
42 TIGR03449 mycothiol_MshA UDP-N 99.9 7.5E-21 1.6E-25 216.9 30.4 287 200-548 102-402 (405)
43 TIGR01485 SPP_plant-cyano sucr 99.9 3.7E-22 8E-27 212.9 17.9 220 593-840 2-246 (249)
44 PTZ00174 phosphomannomutase; P 99.9 1.4E-21 3E-26 208.1 21.1 199 589-798 2-225 (247)
45 cd03818 GT1_ExpC_like This fam 99.9 2.6E-21 5.6E-26 220.4 23.9 302 181-542 71-395 (396)
46 TIGR01486 HAD-SF-IIB-MPGP mann 99.9 1.9E-21 4.1E-26 208.4 20.8 227 594-840 1-255 (256)
47 cd03796 GT1_PIG-A_like This fa 99.9 7.7E-21 1.7E-25 216.7 26.4 281 194-550 85-370 (398)
48 PRK00192 mannosyl-3-phosphogly 99.9 4.8E-21 1E-25 207.1 22.1 235 590-842 2-271 (273)
49 PRK15427 colanic acid biosynth 99.9 1.1E-20 2.5E-25 215.7 26.2 275 200-547 119-405 (406)
50 TIGR02471 sucr_syn_bact_C sucr 99.9 4.9E-21 1.1E-25 202.6 20.4 213 594-840 1-234 (236)
51 PLN02871 UDP-sulfoquinovose:DA 99.9 2.1E-20 4.6E-25 217.5 25.3 284 193-552 140-439 (465)
52 TIGR02463 MPGP_rel mannosyl-3- 99.9 6.6E-21 1.4E-25 199.5 18.0 197 594-800 1-218 (221)
53 cd03791 GT1_Glycogen_synthase_ 99.9 2.9E-20 6.3E-25 216.9 25.3 310 179-545 110-474 (476)
54 cd03800 GT1_Sucrose_synthase T 99.9 9.8E-20 2.1E-24 206.1 27.0 284 201-542 103-397 (398)
55 TIGR02149 glgA_Coryne glycogen 99.9 1.5E-19 3.2E-24 204.7 27.5 285 200-548 84-387 (388)
56 PLN00142 sucrose synthase 99.8 2E-19 4.2E-24 214.3 28.0 330 175-545 384-768 (815)
57 TIGR03088 stp2 sugar transfera 99.8 1.5E-19 3.3E-24 203.8 25.6 207 298-547 160-372 (374)
58 TIGR02470 sucr_synth sucrose s 99.8 4.5E-19 9.8E-24 211.3 30.7 339 176-545 362-745 (784)
59 cd04951 GT1_WbdM_like This fam 99.8 1.6E-19 3.4E-24 201.2 25.4 281 191-545 73-358 (360)
60 cd03806 GT1_ALG11_like This fa 99.8 2.4E-19 5.1E-24 205.7 24.6 273 196-535 106-414 (419)
61 cd05844 GT1_like_7 Glycosyltra 99.8 3.1E-19 6.8E-24 200.0 25.1 274 192-542 77-365 (367)
62 PLN02382 probable sucrose-phos 99.8 9.6E-20 2.1E-24 206.6 20.6 225 589-843 6-262 (413)
63 PLN02423 phosphomannomutase 99.8 2.6E-19 5.6E-24 190.2 22.6 210 592-841 7-244 (245)
64 cd03813 GT1_like_3 This family 99.8 3.9E-19 8.4E-24 207.3 23.1 276 198-543 172-472 (475)
65 cd03812 GT1_CapH_like This fam 99.8 7.2E-19 1.6E-23 196.0 23.5 263 192-525 75-343 (358)
66 cd03819 GT1_WavL_like This fam 99.8 6.6E-19 1.4E-23 196.1 22.8 269 193-532 74-349 (355)
67 cd03805 GT1_ALG2_like This fam 99.8 1.3E-18 2.8E-23 197.2 25.5 280 200-540 95-391 (392)
68 cd04962 GT1_like_5 This family 99.8 2.4E-18 5.2E-23 193.1 27.0 286 185-546 73-369 (371)
69 PLN02949 transferase, transfer 99.8 3E-18 6.6E-23 197.7 27.5 314 150-549 109-458 (463)
70 PRK14502 bifunctional mannosyl 99.8 4.4E-19 9.5E-24 205.7 20.2 203 589-803 413-657 (694)
71 cd03809 GT1_mtfB_like This fam 99.8 1.3E-18 2.8E-23 193.3 22.9 275 196-542 84-364 (365)
72 PRK15179 Vi polysaccharide bio 99.8 1.8E-18 3.9E-23 206.4 22.8 280 194-543 397-689 (694)
73 cd03799 GT1_amsK_like This is 99.8 7E-18 1.5E-22 187.5 25.8 268 194-539 76-353 (355)
74 cd03793 GT1_Glycogen_synthase_ 99.8 2E-18 4.3E-23 197.5 21.6 356 153-545 106-584 (590)
75 PRK10307 putative glycosyl tra 99.8 1.2E-17 2.5E-22 191.4 28.0 282 201-549 108-409 (412)
76 PRK15490 Vi polysaccharide bio 99.8 3E-18 6.5E-23 196.0 22.6 293 192-547 275-575 (578)
77 cd03801 GT1_YqgM_like This fam 99.8 7.3E-18 1.6E-22 185.2 24.7 283 192-545 80-373 (374)
78 cd03821 GT1_Bme6_like This fam 99.8 6.4E-18 1.4E-22 187.2 24.2 274 200-542 88-374 (375)
79 cd03822 GT1_ecORF704_like This 99.8 6.9E-18 1.5E-22 187.5 23.1 283 193-545 72-365 (366)
80 cd04946 GT1_AmsK_like This fam 99.8 1.8E-17 3.8E-22 189.7 26.3 272 197-542 125-406 (407)
81 TIGR02461 osmo_MPG_phos mannos 99.8 3.6E-18 7.9E-23 179.0 18.6 190 594-799 1-221 (225)
82 TIGR02918 accessory Sec system 99.8 1.8E-17 3.8E-22 193.2 26.0 271 199-546 211-498 (500)
83 cd03798 GT1_wlbH_like This fam 99.8 1.6E-17 3.6E-22 183.3 24.6 282 195-546 91-375 (377)
84 cd03807 GT1_WbnK_like This fam 99.8 1.6E-17 3.5E-22 183.2 24.5 281 194-544 77-363 (365)
85 cd03817 GT1_UGDG_like This fam 99.8 1.2E-17 2.6E-22 185.2 23.1 270 192-533 79-362 (374)
86 cd03814 GT1_like_2 This family 99.8 1.3E-17 2.9E-22 184.9 23.4 274 194-545 80-363 (364)
87 PRK10125 putative glycosyl tra 99.8 5.4E-18 1.2E-22 193.3 20.5 186 298-545 212-402 (405)
88 cd03794 GT1_wbuB_like This fam 99.8 2.9E-17 6.2E-22 182.8 24.9 274 201-541 101-393 (394)
89 cd04949 GT1_gtfA_like This fam 99.8 1.5E-17 3.2E-22 187.4 20.9 280 181-539 83-370 (372)
90 PHA01633 putative glycosyl tra 99.8 6.3E-18 1.4E-22 185.8 16.8 194 303-542 118-334 (335)
91 cd03820 GT1_amsD_like This fam 99.8 2.8E-17 6E-22 179.9 21.0 264 194-542 80-347 (348)
92 PRK12702 mannosyl-3-phosphogly 99.8 2.7E-17 5.9E-22 173.7 19.7 190 592-800 1-249 (302)
93 cd03823 GT1_ExpE7_like This fa 99.8 9.9E-17 2.1E-21 177.3 24.5 262 191-543 90-355 (359)
94 PRK09922 UDP-D-galactose:(gluc 99.7 4.1E-17 9E-22 183.5 19.9 240 191-515 78-326 (359)
95 cd03808 GT1_cap1E_like This fa 99.7 1.1E-16 2.4E-21 175.9 22.2 277 193-542 76-358 (359)
96 PF05116 S6PP: Sucrose-6F-phos 99.7 2.8E-17 6.2E-22 174.7 14.8 193 592-819 2-209 (247)
97 PLN02846 digalactosyldiacylgly 99.7 9.2E-17 2E-21 183.2 19.2 269 193-546 112-390 (462)
98 cd03816 GT1_ALG1_like This fam 99.7 4.3E-16 9.3E-21 178.7 24.0 165 334-543 231-409 (415)
99 PHA01630 putative group 1 glyc 99.7 2.9E-16 6.3E-21 174.1 20.7 211 255-546 94-329 (331)
100 PLN02501 digalactosyldiacylgly 99.7 1.5E-16 3.2E-21 183.7 17.8 265 194-544 431-706 (794)
101 cd03795 GT1_like_4 This family 99.7 5.3E-16 1.1E-20 172.6 21.7 258 201-531 85-349 (357)
102 cd03811 GT1_WabH_like This fam 99.7 5.2E-16 1.1E-20 169.9 19.5 247 194-512 78-328 (353)
103 TIGR03087 stp1 sugar transfera 99.7 1.5E-15 3.3E-20 173.2 23.6 189 299-545 197-394 (397)
104 cd03804 GT1_wbaZ_like This fam 99.7 1.1E-15 2.4E-20 170.8 21.3 245 200-540 84-349 (351)
105 cd03802 GT1_AviGT4_like This f 99.7 1.3E-15 2.9E-20 168.1 20.7 246 192-543 82-332 (335)
106 cd04955 GT1_like_6 This family 99.7 2.5E-15 5.4E-20 167.7 22.6 265 201-545 86-362 (363)
107 cd03825 GT1_wcfI_like This fam 99.7 1.5E-15 3.2E-20 169.5 20.2 194 298-546 159-363 (365)
108 COG0297 GlgA Glycogen synthase 99.6 1.3E-14 2.8E-19 165.8 22.8 293 201-547 132-477 (487)
109 PRK05749 3-deoxy-D-manno-octul 99.6 2.4E-14 5.1E-19 164.9 24.8 287 188-546 115-418 (425)
110 PLN02275 transferase, transfer 99.6 1.1E-14 2.3E-19 164.8 19.9 239 196-511 99-371 (371)
111 PF00534 Glycos_transf_1: Glyc 99.6 7.8E-15 1.7E-19 146.7 10.7 143 333-514 13-159 (172)
112 COG3769 Predicted hydrolase (H 99.5 2E-13 4.2E-18 135.4 14.5 199 591-799 6-231 (274)
113 cd04950 GT1_like_1 Glycosyltra 99.5 2E-12 4.4E-17 146.3 22.4 267 196-547 99-371 (373)
114 KOG1111 N-acetylglucosaminyltr 99.4 6.4E-13 1.4E-17 141.0 10.2 189 273-513 145-335 (426)
115 PLN02605 monogalactosyldiacylg 99.4 1.1E-10 2.3E-15 132.7 24.3 191 299-543 174-377 (382)
116 cd01635 Glycosyltransferase_GT 99.2 2.7E-10 5.9E-15 117.5 15.3 111 340-489 109-220 (229)
117 KOG0853 Glycosyltransferase [C 99.2 8.7E-10 1.9E-14 124.7 18.2 186 335-551 273-467 (495)
118 COG0438 RfaG Glycosyltransfera 99.2 7.2E-10 1.6E-14 120.1 17.1 197 299-547 173-376 (381)
119 PRK00726 murG undecaprenyldiph 99.1 3.1E-09 6.7E-14 119.4 19.8 257 191-545 85-355 (357)
120 PRK13609 diacylglycerol glucos 99.1 1.1E-08 2.4E-13 116.0 24.5 274 181-548 88-372 (380)
121 cd03785 GT1_MurG MurG is an N- 99.1 3.6E-09 7.7E-14 118.2 19.4 249 189-536 81-346 (350)
122 TIGR00236 wecB UDP-N-acetylglu 99.1 6.1E-09 1.3E-13 117.5 20.2 252 186-514 76-335 (365)
123 cd03786 GT1_UDP-GlcNAc_2-Epime 99.0 2.5E-08 5.5E-13 112.0 22.6 252 184-516 76-340 (363)
124 TIGR01133 murG undecaprenyldip 99.0 1.6E-08 3.5E-13 112.9 18.0 180 301-539 153-346 (348)
125 TIGR01670 YrbI-phosphatas 3-de 99.0 1.5E-09 3.2E-14 107.2 8.3 72 758-844 76-152 (154)
126 PRK13608 diacylglycerol glucos 99.0 7.2E-08 1.6E-12 110.0 23.2 167 335-551 203-375 (391)
127 PRK09484 3-deoxy-D-manno-octul 98.9 2.5E-09 5.3E-14 108.8 9.0 123 591-828 20-153 (183)
128 TIGR02094 more_P_ylases alpha- 98.9 9.1E-08 2E-12 113.6 19.8 181 334-544 388-597 (601)
129 PF03332 PMM: Eukaryotic phosp 98.8 4.1E-08 8.9E-13 99.8 12.6 192 618-841 2-219 (220)
130 PRK11133 serB phosphoserine ph 98.8 1.3E-07 2.9E-12 104.2 16.7 65 757-838 247-316 (322)
131 KOG3189 Phosphomannomutase [Li 98.8 6.6E-08 1.4E-12 95.0 12.5 199 586-795 5-228 (252)
132 PF13692 Glyco_trans_1_4: Glyc 98.8 7E-09 1.5E-13 99.3 5.8 128 335-512 2-134 (135)
133 PRK00025 lpxB lipid-A-disaccha 98.7 4.1E-07 8.9E-12 103.1 19.5 133 334-514 185-342 (380)
134 cd01427 HAD_like Haloacid deha 98.7 2.9E-08 6.2E-13 94.1 8.4 55 594-649 1-60 (139)
135 TIGR02726 phenyl_P_delta pheny 98.7 6.9E-08 1.5E-12 96.5 9.5 142 592-844 7-158 (169)
136 PRK09814 beta-1,6-galactofuran 98.6 1E-06 2.2E-11 98.3 17.7 237 192-528 58-312 (333)
137 TIGR03713 acc_sec_asp1 accesso 98.6 1.9E-06 4.2E-11 101.1 20.6 256 180-515 202-490 (519)
138 KOG1387 Glycosyltransferase [C 98.6 1.1E-06 2.3E-11 93.7 16.0 311 176-547 124-458 (465)
139 TIGR01458 HAD-SF-IIA-hyp3 HAD- 98.6 1.3E-06 2.7E-11 93.9 16.1 59 592-654 1-62 (257)
140 COG1778 Low specificity phosph 98.5 1.2E-07 2.5E-12 90.5 6.3 71 758-843 83-158 (170)
141 cd04299 GT1_Glycogen_Phosphory 98.5 1.6E-05 3.4E-10 96.5 23.3 181 337-547 480-689 (778)
142 TIGR01457 HAD-SF-IIA-hyp2 HAD- 98.4 6.7E-07 1.5E-11 95.5 9.8 54 592-650 1-57 (249)
143 PRK10444 UMP phosphatase; Prov 98.4 5.4E-06 1.2E-10 88.4 16.2 59 592-655 1-59 (248)
144 TIGR01452 PGP_euk phosphoglyco 98.4 1.8E-06 4E-11 93.8 12.5 59 592-655 2-60 (279)
145 smart00775 LNS2 LNS2 domain. T 98.4 4.7E-07 1E-11 89.6 6.8 52 594-649 1-66 (157)
146 PRK13225 phosphoglycolate phos 98.4 2.9E-06 6.3E-11 91.7 13.5 70 758-841 196-271 (273)
147 PF05693 Glycogen_syn: Glycoge 98.4 7.5E-05 1.6E-09 86.4 23.8 309 202-542 146-576 (633)
148 COG0560 SerB Phosphoserine pho 98.3 2.6E-06 5.7E-11 88.5 10.5 43 754-799 140-182 (212)
149 PRK13288 pyrophosphatase PpaX; 98.3 4.1E-07 8.9E-12 94.7 4.1 68 758-839 139-212 (214)
150 COG0546 Gph Predicted phosphat 98.3 1.3E-06 2.9E-11 91.4 7.6 67 759-839 147-219 (220)
151 PLN02645 phosphoglycolate phos 98.3 2.2E-05 4.9E-10 86.7 16.9 60 591-655 27-86 (311)
152 TIGR00338 serB phosphoserine p 98.3 7.2E-06 1.6E-10 85.6 12.3 62 758-836 152-218 (219)
153 PRK13226 phosphoglycolate phos 98.3 2.1E-06 4.5E-11 90.5 8.2 66 759-838 153-225 (229)
154 PRK13223 phosphoglycolate phos 98.2 4E-06 8.6E-11 90.8 10.0 71 754-838 154-230 (272)
155 PRK13222 phosphoglycolate phos 98.2 3.8E-06 8.2E-11 87.9 7.4 66 759-838 151-222 (226)
156 TIGR01488 HAD-SF-IB Haloacid D 98.1 6.5E-06 1.4E-10 82.7 8.5 41 753-796 137-177 (177)
157 TIGR00215 lpxB lipid-A-disacch 98.1 0.00018 3.8E-09 82.0 21.0 134 334-514 190-348 (385)
158 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.1 2.3E-05 5E-10 80.3 11.8 39 758-799 147-185 (201)
159 COG1519 KdtA 3-deoxy-D-manno-o 98.1 0.0013 2.9E-08 73.3 26.0 299 182-532 32-404 (419)
160 PRK06769 hypothetical protein; 98.1 1.6E-05 3.5E-10 80.1 9.2 65 759-837 95-171 (173)
161 TIGR01689 EcbF-BcbF capsule bi 98.0 6.1E-06 1.3E-10 78.0 5.4 51 593-644 2-55 (126)
162 PRK08942 D,D-heptose 1,7-bisph 98.0 5E-05 1.1E-09 77.0 11.4 66 759-838 105-177 (181)
163 PRK09552 mtnX 2-hydroxy-3-keto 97.9 0.00014 3E-09 76.2 13.1 72 756-842 146-217 (219)
164 PLN02954 phosphoserine phospha 97.9 1.8E-05 4E-10 82.8 6.2 66 755-837 152-223 (224)
165 TIGR01684 viral_ppase viral ph 97.9 2.6E-05 5.7E-10 83.3 6.9 71 591-665 125-201 (301)
166 PRK10826 2-deoxyglucose-6-phos 97.8 8E-05 1.7E-09 78.0 10.0 62 759-834 150-216 (222)
167 TIGR01449 PGP_bact 2-phosphogl 97.8 1.2E-05 2.5E-10 83.5 3.1 64 759-836 143-212 (213)
168 PF13524 Glyco_trans_1_2: Glyc 97.8 3.7E-05 7.9E-10 68.7 5.4 87 434-542 1-91 (92)
169 TIGR01662 HAD-SF-IIIA HAD-supe 97.7 0.00011 2.5E-09 70.1 8.8 46 593-639 1-51 (132)
170 TIGR00213 GmhB_yaeD D,D-heptos 97.7 0.00024 5.2E-09 71.7 11.1 63 759-834 108-175 (176)
171 PRK11587 putative phosphatase; 97.7 5.2E-05 1.1E-09 79.2 6.3 61 759-833 140-203 (218)
172 TIGR03351 PhnX-like phosphonat 97.7 0.00018 3.9E-09 75.1 9.7 66 759-837 147-219 (220)
173 PRK13478 phosphonoacetaldehyde 97.7 0.00051 1.1E-08 74.1 13.4 70 759-842 160-259 (267)
174 PLN02770 haloacid dehalogenase 97.6 0.00012 2.7E-09 78.1 7.8 60 759-832 166-230 (248)
175 TIGR02919 accessory Sec system 97.6 0.00041 8.9E-09 79.9 12.1 132 332-515 281-413 (438)
176 PLN02575 haloacid dehalogenase 97.6 0.00012 2.5E-09 82.2 6.8 72 759-844 274-349 (381)
177 PLN02779 haloacid dehalogenase 97.6 0.00011 2.5E-09 80.1 6.6 62 759-834 204-269 (286)
178 TIGR01664 DNA-3'-Pase DNA 3'-p 97.5 0.00021 4.7E-09 71.4 7.2 50 589-639 10-68 (166)
179 PHA03398 viral phosphatase sup 97.5 0.00018 3.9E-09 77.0 6.8 55 592-650 128-185 (303)
180 PLN03243 haloacid dehalogenase 97.4 0.00031 6.7E-09 75.5 7.6 69 759-842 167-240 (260)
181 PHA02530 pseT polynucleotide k 97.4 0.0013 2.9E-08 72.1 12.4 56 592-648 158-222 (300)
182 PRK06698 bifunctional 5'-methy 97.4 0.0006 1.3E-08 79.5 9.8 67 758-840 386-456 (459)
183 TIGR01656 Histidinol-ppas hist 97.4 0.00059 1.3E-08 66.7 8.2 37 759-798 103-139 (147)
184 TIGR01668 YqeG_hyp_ppase HAD s 97.4 0.0026 5.7E-08 63.8 13.0 58 575-639 12-69 (170)
185 PHA02597 30.2 hypothetical pro 97.3 0.00034 7.3E-09 71.8 6.1 60 759-834 132-195 (197)
186 TIGR01261 hisB_Nterm histidino 97.3 0.0011 2.4E-08 66.0 9.1 38 759-799 105-142 (161)
187 PRK14988 GMP/IMP nucleotidase; 97.3 0.00066 1.4E-08 71.3 7.8 70 759-841 151-222 (224)
188 TIGR02253 CTE7 HAD superfamily 97.2 0.00089 1.9E-08 69.8 8.0 61 759-833 152-220 (221)
189 TIGR01489 DKMTPPase-SF 2,3-dik 97.2 0.0014 3.1E-08 66.1 9.1 42 753-800 144-185 (188)
190 COG0647 NagD Predicted sugar p 97.1 0.0013 2.9E-08 70.3 8.1 49 591-644 7-55 (269)
191 TIGR01990 bPGM beta-phosphoglu 97.1 0.0062 1.3E-07 61.4 12.3 37 759-798 143-179 (185)
192 TIGR01681 HAD-SF-IIIC HAD-supe 97.0 0.0012 2.7E-08 62.9 5.7 55 593-648 1-65 (128)
193 PLN02940 riboflavin kinase 96.9 0.0011 2.4E-08 75.3 6.0 62 759-834 152-217 (382)
194 TIGR01459 HAD-SF-IIA-hyp4 HAD- 96.9 0.023 5E-07 60.4 15.6 54 591-649 7-62 (242)
195 TIGR01460 HAD-SF-IIA Haloacid 96.9 0.022 4.9E-07 60.3 15.0 50 595-649 1-53 (236)
196 TIGR01525 ATPase-IB_hvy heavy 96.9 0.004 8.6E-08 74.5 10.3 64 586-650 358-422 (556)
197 TIGR01672 AphA HAD superfamily 96.8 0.0023 5E-08 67.6 6.7 70 577-647 48-152 (237)
198 TIGR01549 HAD-SF-IA-v1 haloaci 96.7 0.0038 8.2E-08 61.2 6.9 35 759-797 120-154 (154)
199 PRK11590 hypothetical protein; 96.7 0.0032 7E-08 65.5 6.7 38 756-799 161-198 (211)
200 TIGR01686 FkbH FkbH-like domai 96.7 0.011 2.3E-07 65.8 11.1 114 591-797 2-123 (320)
201 PRK10671 copA copper exporting 96.7 0.0063 1.4E-07 76.3 10.3 64 585-649 623-686 (834)
202 TIGR02252 DREG-2 REG-2-like, H 96.5 0.0048 1E-07 63.5 6.7 36 760-798 163-199 (203)
203 TIGR01512 ATPase-IB2_Cd heavy 96.5 0.0071 1.5E-07 72.0 8.8 59 591-650 341-400 (536)
204 COG2179 Predicted hydrolase of 96.5 0.0092 2E-07 58.3 7.6 61 587-650 23-83 (175)
205 PRK10563 6-phosphogluconate ph 96.4 0.0015 3.3E-08 68.2 2.3 38 759-799 144-181 (221)
206 TIGR01511 ATPase-IB1_Cu copper 96.4 0.016 3.5E-07 69.3 11.3 59 590-649 383-441 (562)
207 TIGR01497 kdpB K+-transporting 96.4 0.012 2.7E-07 70.9 9.9 67 583-650 417-483 (675)
208 PF06437 ISN1: IMP-specific 5' 96.3 0.14 3.1E-06 56.4 16.3 203 578-791 133-388 (408)
209 PRK08238 hypothetical protein; 96.3 0.02 4.3E-07 66.9 10.4 34 614-648 74-107 (479)
210 PF13344 Hydrolase_6: Haloacid 96.2 0.0014 2.9E-08 59.9 0.5 51 595-650 1-51 (101)
211 TIGR01522 ATPase-IIA2_Ca golgi 96.2 0.027 5.8E-07 71.1 12.1 65 585-650 496-565 (884)
212 PRK10725 fructose-1-P/6-phosph 96.2 0.0075 1.6E-07 61.1 5.8 37 759-798 144-180 (188)
213 TIGR02009 PGMB-YQAB-SF beta-ph 96.2 0.002 4.3E-08 65.0 1.4 37 759-798 144-180 (185)
214 TIGR02247 HAD-1A3-hyp Epoxide 96.1 0.1 2.3E-06 53.9 14.0 36 760-798 155-190 (211)
215 PRK05446 imidazole glycerol-ph 96.1 0.038 8.1E-07 61.9 11.1 47 591-638 1-55 (354)
216 TIGR01454 AHBA_synth_RP 3-amin 96.1 0.012 2.6E-07 60.7 6.5 66 759-838 133-204 (205)
217 PLN02919 haloacid dehalogenase 96.1 0.04 8.7E-07 70.6 12.5 61 759-833 220-285 (1057)
218 PF00702 Hydrolase: haloacid d 96.1 0.0067 1.5E-07 62.5 4.7 57 593-650 108-164 (215)
219 PRK11033 zntA zinc/cadmium/mer 96.0 0.036 7.8E-07 68.5 11.5 65 585-650 541-605 (741)
220 KOG3120 Predicted haloacid deh 95.9 0.026 5.6E-07 57.5 7.7 94 747-845 152-251 (256)
221 PTZ00445 p36-lilke protein; Pr 95.7 0.017 3.6E-07 59.1 5.5 158 579-798 30-199 (219)
222 PF08323 Glyco_transf_5: Starc 95.7 0.041 8.8E-07 58.7 8.7 86 187-273 118-233 (245)
223 TIGR01106 ATPase-IIC_X-K sodiu 95.4 0.045 9.7E-07 69.9 9.5 40 610-650 566-605 (997)
224 TIGR01116 ATPase-IIA1_Ca sarco 95.4 0.1 2.2E-06 66.2 12.4 41 609-650 534-574 (917)
225 PRK11009 aphA acid phosphatase 95.4 0.023 4.9E-07 60.1 5.3 62 577-639 48-140 (237)
226 PF13242 Hydrolase_like: HAD-h 95.3 0.04 8.6E-07 47.2 5.8 59 760-832 7-74 (75)
227 COG4087 Soluble P-type ATPase 95.2 0.025 5.5E-07 52.9 4.5 54 774-840 90-149 (152)
228 PRK01122 potassium-transportin 95.2 0.09 1.9E-06 63.8 10.2 65 585-650 418-482 (679)
229 TIGR01517 ATPase-IIB_Ca plasma 95.1 0.11 2.3E-06 66.3 11.4 138 610-837 577-721 (941)
230 PF12710 HAD: haloacid dehalog 95.1 0.054 1.2E-06 54.8 7.1 34 615-649 92-125 (192)
231 TIGR01652 ATPase-Plipid phosph 95.1 0.092 2E-06 67.7 10.7 185 610-837 629-819 (1057)
232 PF09419 PGP_phosphatase: Mito 95.0 0.028 6E-07 56.0 4.5 48 573-624 24-71 (168)
233 PLN03190 aminophospholipid tra 94.9 0.2 4.3E-06 64.8 13.0 40 610-650 724-763 (1178)
234 PRK14010 potassium-transportin 94.9 0.12 2.6E-06 62.7 10.2 69 581-650 410-478 (673)
235 TIGR01675 plant-AP plant acid 94.9 0.048 1E-06 57.1 6.0 56 591-647 76-157 (229)
236 TIGR01657 P-ATPase-V P-type AT 94.8 0.19 4.1E-06 64.7 12.5 47 610-660 654-700 (1054)
237 PF02684 LpxB: Lipid-A-disacch 94.7 2.4 5.2E-05 48.0 19.4 251 195-516 80-343 (373)
238 PF08645 PNK3P: Polynucleotide 94.7 0.022 4.8E-07 56.5 2.8 45 593-638 1-54 (159)
239 TIGR02137 HSK-PSP phosphoserin 94.6 0.05 1.1E-06 56.3 5.2 64 756-840 130-198 (203)
240 KOG1615 Phosphoserine phosphat 94.5 0.0077 1.7E-07 60.1 -0.9 68 753-834 154-222 (227)
241 PRK13582 thrH phosphoserine ph 94.4 0.065 1.4E-06 55.1 5.7 53 776-842 143-200 (205)
242 TIGR01490 HAD-SF-IB-hyp1 HAD-s 94.3 0.045 9.8E-07 56.1 4.3 42 755-799 152-193 (202)
243 COG0763 LpxB Lipid A disacchar 94.3 2 4.4E-05 48.0 17.2 292 176-543 69-376 (381)
244 TIGR01647 ATPase-IIIA_H plasma 94.1 0.49 1.1E-05 58.8 13.5 165 587-838 412-587 (755)
245 PRK10517 magnesium-transportin 94.1 0.34 7.3E-06 61.3 12.1 136 610-837 548-689 (902)
246 KOG0210 P-type ATPase [Inorgan 94.1 0.4 8.7E-06 56.4 11.4 65 757-840 767-835 (1051)
247 PF08235 LNS2: LNS2 (Lipin/Ned 94.0 0.085 1.8E-06 51.9 5.2 56 594-650 1-67 (157)
248 TIGR01524 ATPase-IIIB_Mg magne 93.9 0.41 8.9E-06 60.4 12.5 137 610-838 513-655 (867)
249 PRK15122 magnesium-transportin 93.9 0.48 1E-05 60.0 13.0 137 610-838 548-690 (903)
250 TIGR01422 phosphonatase phosph 93.9 0.1 2.2E-06 55.7 6.1 65 759-837 158-252 (253)
251 TIGR01685 MDP-1 magnesium-depe 93.7 0.086 1.9E-06 53.0 4.8 56 592-648 2-81 (174)
252 PF13439 Glyco_transf_4: Glyco 93.5 0.015 3.3E-07 57.1 -1.1 99 190-313 73-177 (177)
253 TIGR01533 lipo_e_P4 5'-nucleot 93.3 0.078 1.7E-06 57.0 4.0 53 591-644 74-149 (266)
254 TIGR01494 ATPase_P-type ATPase 93.1 0.38 8.2E-06 56.9 9.7 58 592-650 327-384 (499)
255 TIGR01523 ATPase-IID_K-Na pota 92.9 0.46 9.9E-06 61.1 10.7 40 610-650 644-683 (1053)
256 TIGR01680 Veg_Stor_Prot vegeta 92.9 0.13 2.8E-06 55.0 4.8 50 592-642 101-174 (275)
257 COG0474 MgtA Cation transport 92.8 0.68 1.5E-05 58.7 11.9 41 609-650 544-584 (917)
258 KOG2941 Beta-1,4-mannosyltrans 92.7 3 6.4E-05 45.8 14.5 168 334-544 254-435 (444)
259 TIGR03492 conserved hypothetic 92.5 1.5 3.2E-05 50.3 13.3 139 335-514 207-365 (396)
260 TIGR01663 PNK-3'Pase polynucle 92.3 0.13 2.8E-06 60.6 4.2 50 590-640 166-224 (526)
261 KOG3040 Predicted sugar phosph 92.0 1.6 3.5E-05 44.4 10.8 61 590-655 5-65 (262)
262 cd03784 GT1_Gtf_like This fami 91.5 12 0.00027 42.4 19.3 72 415-512 291-371 (401)
263 smart00577 CPDc catalytic doma 91.3 0.34 7.3E-06 47.4 5.3 56 592-649 2-80 (148)
264 PF03767 Acid_phosphat_B: HAD 91.2 0.03 6.4E-07 59.1 -2.4 75 590-665 70-167 (229)
265 TIGR03333 salvage_mtnX 2-hydro 90.9 0.38 8.1E-06 50.1 5.6 71 756-841 142-212 (214)
266 KOG0206 P-type ATPase [General 90.5 1.4 3.1E-05 55.9 11.0 42 752-799 775-816 (1151)
267 PF11019 DUF2608: Protein of u 90.5 2.9 6.2E-05 44.8 11.9 56 754-819 158-213 (252)
268 COG0381 WecB UDP-N-acetylgluco 90.2 15 0.00032 41.4 17.3 138 335-517 205-345 (383)
269 TIGR03568 NeuC_NnaA UDP-N-acet 89.8 13 0.00027 42.2 17.1 72 413-512 263-338 (365)
270 PRK13582 thrH phosphoserine ph 89.2 0.33 7.2E-06 49.8 3.5 34 615-650 71-104 (205)
271 TIGR01456 CECR5 HAD-superfamil 89.2 0.37 8E-06 53.6 4.0 49 594-647 2-57 (321)
272 COG0637 Predicted phosphatase/ 88.8 0.68 1.5E-05 48.5 5.5 33 764-799 149-181 (221)
273 KOG0208 Cation transport ATPas 88.7 0.81 1.7E-05 56.1 6.6 86 565-661 663-750 (1140)
274 TIGR01454 AHBA_synth_RP 3-amin 88.5 0.51 1.1E-05 48.5 4.3 36 613-649 76-111 (205)
275 TIGR01545 YfhB_g-proteo haloac 88.2 1.1 2.4E-05 46.6 6.5 23 777-799 175-197 (210)
276 TIGR03333 salvage_mtnX 2-hydro 88.0 0.98 2.1E-05 46.9 6.0 36 614-650 72-107 (214)
277 TIGR01490 HAD-SF-IB-hyp1 HAD-s 87.7 0.88 1.9E-05 46.5 5.5 37 613-650 88-124 (202)
278 PRK09449 dUMP phosphatase; Pro 87.5 1.2 2.5E-05 46.4 6.3 66 759-838 152-223 (224)
279 PF13844 Glyco_transf_41: Glyc 87.2 2.1 4.5E-05 49.7 8.5 101 333-454 283-383 (468)
280 PF06888 Put_Phosphatase: Puta 86.6 0.74 1.6E-05 48.6 4.2 77 754-840 146-233 (234)
281 COG3882 FkbH Predicted enzyme 86.0 1.9 4.1E-05 49.2 7.1 73 580-653 210-295 (574)
282 PF12689 Acid_PPase: Acid Phos 86.0 0.67 1.5E-05 46.4 3.3 45 748-797 100-144 (169)
283 KOG3109 Haloacid dehalogenase- 85.9 0.68 1.5E-05 47.5 3.3 73 748-840 155-230 (244)
284 COG0241 HisB Histidinol phosph 85.9 0.89 1.9E-05 45.9 4.1 46 592-638 5-56 (181)
285 PF03031 NIF: NLI interacting 85.8 0.45 9.8E-06 46.8 2.0 56 593-650 1-72 (159)
286 PF02350 Epimerase_2: UDP-N-ac 85.6 68 0.0015 36.0 21.7 257 183-513 54-318 (346)
287 PF05152 DUF705: Protein of un 84.0 2.8 6.1E-05 44.9 6.9 58 591-649 121-178 (297)
288 TIGR02251 HIF-SF_euk Dullard-l 83.7 1.9 4.1E-05 42.9 5.3 57 592-650 1-78 (162)
289 TIGR01426 MGT glycosyltransfer 83.7 12 0.00025 42.6 12.6 97 415-539 278-384 (392)
290 PF13579 Glyco_trans_4_4: Glyc 83.6 1.4 3E-05 42.2 4.3 68 200-272 74-146 (160)
291 TIGR02254 YjjG/YfnB HAD superf 83.0 2.4 5.2E-05 43.9 6.1 66 759-837 154-224 (224)
292 TIGR02245 HAD_IIID1 HAD-superf 82.9 2 4.3E-05 44.1 5.2 58 590-649 19-80 (195)
293 TIGR02137 HSK-PSP phosphoserin 82.1 1.5 3.2E-05 45.3 4.0 36 613-650 69-104 (203)
294 TIGR01548 HAD-SF-IA-hyp1 haloa 81.5 0.67 1.5E-05 47.3 1.2 34 759-795 163-196 (197)
295 PLN02811 hydrolase 81.5 2.1 4.6E-05 44.5 5.0 60 759-832 139-205 (220)
296 COG4359 Uncharacterized conser 80.9 2.3 5E-05 42.5 4.6 42 753-801 142-183 (220)
297 PRK10748 flavin mononucleotide 80.9 0.82 1.8E-05 48.4 1.7 37 759-798 165-202 (238)
298 KOG0202 Ca2+ transporting ATPa 80.3 11 0.00023 46.2 10.5 53 590-650 569-621 (972)
299 COG3700 AphA Acid phosphatase 80.0 3.2 6.9E-05 41.2 5.1 69 577-645 48-146 (237)
300 PRK10748 flavin mononucleotide 79.9 3.2 7E-05 43.8 5.8 15 591-605 9-23 (238)
301 COG2217 ZntA Cation transport 79.7 3.1 6.7E-05 51.0 6.2 68 748-838 579-652 (713)
302 TIGR01544 HAD-SF-IE haloacid d 79.4 1.7 3.7E-05 47.0 3.5 38 756-796 190-230 (277)
303 PRK09449 dUMP phosphatase; Pro 79.3 0.94 2E-05 47.2 1.4 16 590-605 1-16 (224)
304 PF06941 NT5C: 5' nucleotidase 79.1 1.4 3.1E-05 44.8 2.7 28 613-641 74-101 (191)
305 TIGR01422 phosphonatase phosph 78.9 1.5 3.2E-05 46.8 2.8 14 592-605 2-15 (253)
306 TIGR03590 PseG pseudaminic aci 78.8 11 0.00025 40.8 9.8 93 334-457 170-262 (279)
307 TIGR01545 YfhB_g-proteo haloac 78.5 2.3 5E-05 44.2 4.0 15 591-605 4-18 (210)
308 TIGR02254 YjjG/YfnB HAD superf 78.4 1.2 2.7E-05 46.1 2.0 14 592-605 1-14 (224)
309 COG0816 Predicted endonuclease 78.3 12 0.00027 36.2 8.6 73 352-434 40-112 (141)
310 TIGR02250 FCP1_euk FCP1-like p 78.2 3.3 7.1E-05 40.9 4.8 59 590-650 4-94 (156)
311 PF13419 HAD_2: Haloacid dehal 77.3 3.4 7.3E-05 40.3 4.7 37 759-798 135-171 (176)
312 COG4030 Uncharacterized protei 77.1 2.7 5.9E-05 43.3 3.9 38 758-799 191-228 (315)
313 COG0707 MurG UDP-N-acetylgluco 76.6 1.4E+02 0.003 33.8 20.4 148 334-533 182-342 (357)
314 COG1011 Predicted hydrolase (H 75.6 6.5 0.00014 40.7 6.5 64 760-839 157-228 (229)
315 TIGR01993 Pyr-5-nucltdase pyri 75.5 2 4.4E-05 43.2 2.6 37 759-798 143-179 (184)
316 PF07429 Glyco_transf_56: 4-al 75.3 23 0.0005 39.4 10.6 137 336-509 187-329 (360)
317 TIGR01548 HAD-SF-IA-hyp1 haloa 72.7 3.5 7.6E-05 42.0 3.6 28 594-624 2-29 (197)
318 KOG0204 Calcium transporting A 71.7 24 0.00051 43.4 10.3 39 611-650 646-684 (1034)
319 TIGR01428 HAD_type_II 2-haloal 71.6 3 6.4E-05 42.5 2.7 38 759-799 150-187 (198)
320 KOG2116 Protein involved in pl 71.1 5.3 0.00012 47.2 4.8 76 591-667 529-615 (738)
321 PF06888 Put_Phosphatase: Puta 70.9 5.7 0.00012 42.0 4.6 36 614-649 73-109 (234)
322 TIGR01509 HAD-SF-IA-v3 haloaci 69.5 6 0.00013 39.3 4.4 36 760-798 143-178 (183)
323 TIGR01428 HAD_type_II 2-haloal 68.2 4.8 0.0001 40.9 3.4 14 592-605 1-14 (198)
324 PF06258 Mito_fiss_Elm1: Mitoc 68.2 21 0.00046 39.5 8.6 109 325-456 134-250 (311)
325 TIGR01685 MDP-1 magnesium-depe 67.5 8.1 0.00018 38.9 4.8 41 758-798 108-151 (174)
326 COG5083 SMP2 Uncharacterized p 66.4 3.2 6.9E-05 46.7 1.7 50 590-643 373-433 (580)
327 TIGR01493 HAD-SF-IA-v2 Haloaci 65.4 2.3 5E-05 42.3 0.4 33 760-795 142-174 (175)
328 KOG0203 Na+/K+ ATPase, alpha s 65.3 34 0.00073 42.1 9.9 40 614-657 592-631 (1019)
329 PRK09456 ?-D-glucose-1-phospha 65.2 6.7 0.00014 40.1 3.8 37 759-798 143-179 (199)
330 PF04312 DUF460: Protein of un 64.8 8.2 0.00018 36.9 3.9 56 591-650 42-99 (138)
331 TIGR01691 enolase-ppase 2,3-di 63.0 9.4 0.0002 40.0 4.4 38 759-799 154-191 (220)
332 TIGR01993 Pyr-5-nucltdase pyri 62.9 7.5 0.00016 39.0 3.6 35 762-799 110-153 (184)
333 COG4996 Predicted phosphatase 62.4 12 0.00026 35.5 4.4 54 593-647 1-75 (164)
334 KOG1618 Predicted phosphatase 60.5 7.1 0.00015 42.4 2.9 39 593-636 36-78 (389)
335 COG1011 Predicted hydrolase (H 59.5 4.5 9.8E-05 41.9 1.3 16 590-605 2-17 (229)
336 TIGR01681 HAD-SF-IIIC HAD-supe 59.1 13 0.00028 35.3 4.2 34 758-794 90-125 (128)
337 KOG2134 Polynucleotide kinase 56.9 7.7 0.00017 43.3 2.5 46 591-637 74-128 (422)
338 COG4087 Soluble P-type ATPase 56.7 9.4 0.0002 36.3 2.7 48 595-648 17-64 (152)
339 KOG0207 Cation transport ATPas 54.1 20 0.00043 44.4 5.5 68 748-838 765-838 (951)
340 TIGR01493 HAD-SF-IA-v2 Haloaci 53.6 12 0.00025 37.2 3.1 24 594-624 1-24 (175)
341 PRK14986 glycogen phosphorylas 52.8 2.8E+02 0.006 34.8 14.9 136 334-489 542-681 (815)
342 PF12000 Glyco_trans_4_3: Gkyc 52.6 1.1E+02 0.0023 30.9 9.6 50 177-230 42-95 (171)
343 PF00343 Phosphorylase: Carboh 51.9 3.1E+02 0.0068 33.8 15.0 136 334-489 443-582 (713)
344 PF00702 Hydrolase: haloacid d 51.2 5.5 0.00012 40.6 0.3 34 761-797 182-215 (215)
345 COG2503 Predicted secreted aci 51.0 13 0.00029 39.0 3.0 53 589-642 76-151 (274)
346 PRK04128 1-(5-phosphoribosyl)- 50.2 37 0.00081 35.7 6.4 62 579-648 31-93 (228)
347 KOG2882 p-Nitrophenyl phosphat 49.9 15 0.00032 39.9 3.2 60 591-655 21-80 (306)
348 TIGR01672 AphA HAD superfamily 49.6 22 0.00047 37.7 4.5 28 780-818 187-214 (237)
349 COG3914 Spy Predicted O-linked 49.2 1E+02 0.0022 36.7 9.9 94 344-454 437-530 (620)
350 TIGR01509 HAD-SF-IA-v3 haloaci 46.7 8.3 0.00018 38.2 0.8 12 594-605 1-12 (183)
351 KOG2884 26S proteasome regulat 45.2 3.6E+02 0.0078 28.1 11.9 47 475-525 186-237 (259)
352 COG3660 Predicted nucleoside-d 44.6 1.9E+02 0.0042 31.1 10.3 31 201-231 72-102 (329)
353 TIGR01456 CECR5 HAD-superfamil 44.6 35 0.00076 37.8 5.4 51 776-837 262-320 (321)
354 PF09949 DUF2183: Uncharacteri 44.5 49 0.0011 30.1 5.3 36 351-390 49-84 (100)
355 smart00577 CPDc catalytic doma 44.2 10 0.00022 36.8 1.0 33 763-798 104-136 (148)
356 PF13477 Glyco_trans_4_2: Glyc 43.5 35 0.00076 32.1 4.6 40 190-231 67-107 (139)
357 PRK09456 ?-D-glucose-1-phospha 43.3 12 0.00025 38.2 1.3 13 593-605 1-13 (199)
358 PRK14089 ipid-A-disaccharide s 43.0 5.3E+02 0.012 29.0 18.8 28 425-457 229-256 (347)
359 KOG1050 Trehalose-6-phosphate 42.8 3.6 7.7E-05 50.4 -3.0 52 746-797 369-423 (732)
360 PF12710 HAD: haloacid dehalog 42.2 11 0.00025 37.6 1.0 36 758-794 157-192 (192)
361 COG0241 HisB Histidinol phosph 41.2 83 0.0018 31.9 6.9 37 759-798 107-143 (181)
362 COG1168 MalY Bifunctional PLP- 39.8 5.5E+02 0.012 29.2 13.4 90 354-450 147-240 (388)
363 PLN02177 glycerol-3-phosphate 39.6 33 0.00071 40.5 4.4 36 758-800 176-211 (497)
364 COG1819 Glycosyl transferases, 38.9 2E+02 0.0043 33.1 10.6 100 415-544 287-397 (406)
365 KOG3085 Predicted hydrolase (H 38.1 34 0.00075 36.2 3.8 37 760-799 171-208 (237)
366 TIGR00250 RNAse_H_YqgF RNAse H 37.8 1.9E+02 0.0041 27.6 8.5 71 352-432 35-105 (130)
367 COG2179 Predicted hydrolase of 37.7 31 0.00068 34.3 3.1 45 760-820 96-141 (175)
368 PRK11009 aphA acid phosphatase 36.8 45 0.00097 35.4 4.4 28 780-818 187-214 (237)
369 PLN00414 glycosyltransferase f 35.5 3E+02 0.0064 32.2 11.3 113 416-548 316-441 (446)
370 PRK05632 phosphate acetyltrans 35.0 9.6E+02 0.021 29.7 16.6 177 418-648 232-419 (684)
371 PRK13587 1-(5-phosphoribosyl)- 31.6 1.1E+02 0.0024 32.4 6.4 62 579-648 32-96 (234)
372 COG4359 Uncharacterized conser 31.3 33 0.00071 34.7 2.1 38 612-650 73-110 (220)
373 cd01570 NAPRTase_A Nicotinate 30.8 4.9E+02 0.011 29.0 11.6 108 304-431 189-298 (327)
374 COG0637 Predicted phosphatase/ 30.7 76 0.0017 33.1 5.0 15 591-605 1-15 (221)
375 PRK00109 Holliday junction res 30.2 2.8E+02 0.0061 26.7 8.4 70 354-433 43-112 (138)
376 PRK02797 4-alpha-L-fucosyltran 30.0 4.4E+02 0.0095 29.2 10.6 121 337-495 149-272 (322)
377 COG4641 Uncharacterized protei 30.0 1.4E+02 0.0031 33.6 7.0 106 421-547 247-361 (373)
378 smart00775 LNS2 LNS2 domain. T 29.8 95 0.0021 30.6 5.2 40 758-799 102-141 (157)
379 cd04300 GT1_Glycogen_Phosphory 29.2 6.8E+02 0.015 31.5 13.3 136 334-489 529-668 (797)
380 PF04464 Glyphos_transf: CDP-G 26.1 6E+02 0.013 28.3 11.7 233 203-515 81-338 (369)
381 PRK14057 epimerase; Provisiona 23.0 5.6E+02 0.012 27.5 9.7 65 371-439 157-222 (254)
382 KOG4626 O-linked N-acetylgluco 22.7 6.8E+02 0.015 30.4 10.9 84 351-454 773-857 (966)
383 KOG2670 Enolase [Carbohydrate 22.4 70 0.0015 35.0 2.8 41 137-187 272-312 (433)
384 PF06189 5-nucleotidase: 5'-nu 22.1 90 0.0019 33.4 3.5 57 594-650 123-207 (264)
385 PHA03392 egt ecdysteroid UDP-g 21.7 4.5E+02 0.0098 31.2 9.8 77 414-514 348-433 (507)
386 PRK10422 lipopolysaccharide co 21.6 7.1E+02 0.015 27.6 11.1 88 333-439 182-270 (352)
387 PF13528 Glyco_trans_1_3: Glyc 21.3 2.5E+02 0.0055 30.4 7.2 82 333-457 191-272 (318)
388 PRK14985 maltodextrin phosphor 21.1 6.1E+02 0.013 31.9 10.7 136 334-489 528-667 (798)
389 KOG3742 Glycogen synthase [Car 21.1 1.3E+02 0.0028 34.5 4.7 33 424-456 493-525 (692)
390 KOG0331 ATP-dependent RNA heli 20.8 4.7E+02 0.01 31.1 9.3 91 338-440 131-224 (519)
391 COG0373 HemA Glutamyl-tRNA red 20.8 1E+03 0.022 27.6 11.8 33 419-452 226-258 (414)
392 TIGR00007 phosphoribosylformim 20.5 2.1E+02 0.0046 29.7 6.1 63 578-648 28-92 (230)
No 1
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=100.00 E-value=7.7e-193 Score=1724.75 Aligned_cols=846 Identities=79% Similarity=1.323 Sum_probs=800.6
Q ss_pred CCcccccchhhcccCCCCCcccccccccceeecccccccccccCCCCCCCCCC-CCCCCCcEEEEEcCCccceeeCCCCC
Q 002955 1 MVSRSYSNLLDLASGDFPNFSREKKRLPRVATVAGVLSEIDDENSNSVGSDAP-SSVSQERMIIVGNQLPLRAHRSSDGS 79 (863)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~r~iivsnrlP~~~~~~~~~~ 79 (863)
|+||||+|||||++||+..++++.+++|++|++||+++++++++.++.+++.+ +..+.+|+||||||||+.++++++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rliiVsnrlPv~~~~~~~g~ 80 (854)
T PLN02205 1 MVSRSYSNLLELASGESPSFGRMNRRIPRIMTVAGIMSDIDDDPSESVCSDPSSSSVPKDRIIIVANQLPIRAQRKSDGS 80 (854)
T ss_pred CcChhhccHHHhccCCcccccccccCCCceecCCCcccccccccccccccccccCCCCCCcEEEEEccCceEEEEcCCCC
Confidence 89999999999999999999999999999999999999999988877777665 56677899999999999999986654
Q ss_pred CCeEEEeCCCchHHHhhhcccC-CCceEEEeccCccccchhhhhHHHhhccCceEEEeeCChHhHhhHhhhccccccccc
Q 002955 80 GGWTFSWDEDSLLLQLKDGLGE-DVEVIYVGCIKEQIDLSEQDEVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPL 158 (863)
Q Consensus 80 ~~~~~~~~~~~l~~~l~~~~~~-~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~~~~y~gf~~~~lWpl 158 (863)
++|.|+|++|||+++|++++.. ..+++||||++.++++++|+++.+.++++|+|+||||+++++++||+||||++|||+
T Consensus 81 ~~~~~~~~~ggL~~~l~~~~~~~~~~~~wvG~~~~~~~~~~~~~~~~~l~~~~~~~pv~l~~~~~~~~Y~gf~n~~LWPl 160 (854)
T PLN02205 81 KGWIFSWDENSLLLQLKDGLGDDEIEVIYVGCLKEEIHLNEQEEVSQILLETFKCVPTFLPPDLFTRYYHGFCKQQLWPL 160 (854)
T ss_pred cceEEEeCCCchHHHHhhhhhcccCceEEEEecCCCCCchhhhhHHHHHhcCceEEEeeCCHHHHHHHHHhhhhccccch
Confidence 6899999999999999998864 378999999999888888888888888899999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccChhhHHHHHHHHHHHHHHHHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChh
Q 002955 159 FHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE 238 (863)
Q Consensus 159 ~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e 238 (863)
|||+++..|+++.+|+++.|++|++||++||++|++.++|++|+|||||||||+||+|||+++|+++||||||||||++|
T Consensus 161 fH~~~~~~~~~~~~f~~~~w~~Y~~vN~~FA~~v~~~~~~~~d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~e 240 (854)
T PLN02205 161 FHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE 240 (854)
T ss_pred hccCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCCCChH
Confidence 99998888888789999999999999999999999999986799999999999999999999999999999999999999
Q ss_pred HhhcCCChHHHHHHHHhCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCC
Q 002955 239 IYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNL 318 (863)
Q Consensus 239 ~~r~lp~r~eil~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~ 318 (863)
+||+||||++||+|||+||+|||||++|+|||++||+|+||+++..++|+++++|+||+++|+++|+|||++.|+..+..
T Consensus 241 ifr~LP~r~eiL~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~ 320 (854)
T PLN02205 241 IYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSL 320 (854)
T ss_pred HHhhCCcHHHHHHHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999988888899999999999999999999999999999
Q ss_pred chHHHHHHHHHHHhC--CCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHH
Q 002955 319 PETEAKVAELQDQFK--GQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHA 396 (863)
Q Consensus 319 ~~~~~~~~~l~~~~~--~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~ 396 (863)
|++..++++++++++ |+++|+||||+||+|||.+||+|||+||++||+|+|||+||||++|+|+++++|+++++++++
T Consensus 321 ~~~~~~~~~l~~~~~~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~~~ev~~ 400 (854)
T PLN02205 321 PETEAKVKELIKQFCDQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHS 400 (854)
T ss_pred hhHHHHHHHHHHHhccCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHHHHHHHH
Confidence 999999999999995 799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCcc
Q 002955 397 TVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSM 476 (863)
Q Consensus 397 l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~ 476 (863)
+|+|||++||+.+|+||+|+.+.++++|+.|||++||||+|||+|||||||++||+|||++.++++++++.+++.+++|+
T Consensus 401 ~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gv 480 (854)
T PLN02205 401 TVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSM 480 (854)
T ss_pred HHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchheeEEccCccccccccccccccCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999998888888888877788999
Q ss_pred EEecccccCcccCCCceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHhhcccc
Q 002955 477 LVVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLERACRDHMRRR 556 (863)
Q Consensus 477 lVlSe~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~~~~~ 556 (863)
||+|||+||+++|+||++|||||++++|+||++||+||++||+.||++++++|++||+.+|+++||++|+++|++|.+++
T Consensus 481 LiLSEfaGaa~~L~~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d~~~W~~~fl~~l~~~~~~~~~~~ 560 (854)
T PLN02205 481 LVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCRDHSRRR 560 (854)
T ss_pred eEeeeccchhHHhCcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998899
Q ss_pred ccccCcCcceeEeecCcccccCCHHHHHHHHHhcccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEc
Q 002955 557 CWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVS 636 (863)
Q Consensus 557 ~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~T 636 (863)
||++|||++||+++++|+|++|+++.++++|+++++|+|++||||||++..+....|+++++++|++||+++|+.|+|+|
T Consensus 561 ~~~~g~g~~~~~~~~~~~~~~l~~~~i~~~y~~~~~rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvS 640 (854)
T PLN02205 561 CWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVS 640 (854)
T ss_pred hcccccccccccccccccccccCHHHHHHHHHhhcCeEEEEecCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEe
Confidence 99999999999999999999999999999999999999999999999986544668999999999999999999999999
Q ss_pred CCChhhHHHHhhccCCceEEccCcEEEEeCCceeEEeecCCCCccHHHHHHHHHHHHhhcCCCceeeeccceeEeecccC
Q 002955 637 GKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYA 716 (863)
Q Consensus 637 GR~~~~l~~~~~~l~~l~liaenGa~I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~ 716 (863)
||++..+++||+.+++++++|+||++++++++..|+......+..|++.+..+++.|++++||+++|.|+++++|||+++
T Consensus 641 GR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~ertpGs~IE~K~~slv~HyR~a 720 (854)
T PLN02205 641 ARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCVPVADCSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDA 720 (854)
T ss_pred CCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeeecchhhhHHHHHHHHHHHHHHhcCCCchhheecceEEEEehhhC
Confidence 99999999999988779999999999999888889866554466899999999999999999999999999999999999
Q ss_pred CCCcchhhHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHh
Q 002955 717 DPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVI 796 (863)
Q Consensus 717 d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~a 796 (863)
||+++..+++++.+++++.+.+.++.+.+|+.++||+|+++|||.|+++|++++...|+++++++||||+.||++||+.+
T Consensus 721 dpd~~~~qa~el~~~l~~~l~~~~~~v~~G~~vvEV~p~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~ 800 (854)
T PLN02205 721 DPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQGVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVI 800 (854)
T ss_pred ChHHhhhhhHHHHHHHHHHHhcCceEEEECCcEEEEEeCCCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHh
Confidence 99999899999999999999888889999999999999999999999999976544589999999999999999999999
Q ss_pred hhhcCCCCCCCCcceEEEEeCCCccccceecCCHhHHHHHHHHHHHhhcC
Q 002955 797 KSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILRMLLGLAEASAQ 846 (863)
Q Consensus 797 g~~~~~~~~~~~~~~~av~vG~~~s~A~y~l~d~~eV~~~L~~L~~~~~~ 846 (863)
+....+..+++.++.|+|+||.++|+|+|+++++++|.++|+.|++.+.+
T Consensus 801 ~~~~~g~~~~~~~~~~~v~VG~~~S~A~y~L~d~~eV~~lL~~L~~~~~~ 850 (854)
T PLN02205 801 TSSMAGPSIAPRAEVFACTVGQKPSKAKYYLDDTAEIVRLMQGLASVSEQ 850 (854)
T ss_pred hhhccCCcccccccceeEEECCCCccCeEecCCHHHHHHHHHHHHhcchh
Confidence 86444445666778899999999999999999999999999999987655
No 2
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=2.9e-159 Score=1422.04 Aligned_cols=747 Identities=37% Similarity=0.689 Sum_probs=671.4
Q ss_pred CCcEEEEEcCCccceeeCCCCCCCeEEEeCCCchHHHhhhcccCCCceEEEeccCccccch-hhhhHHHhhccCceEEEe
Q 002955 58 QERMIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLS-EQDEVSQTLLETFKCVPA 136 (863)
Q Consensus 58 ~~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~-~~~~~~~~~~~~~~~~pv 136 (863)
+.|+||||||||+.++++++ |+|.++++.|||+++|.+ + ...+++||||+|..++.+ +++.+... +.+|+|+||
T Consensus 93 ~~rlIiVSNRlPv~~~~~~~--g~~~~~~s~GGLvsaL~~-~-~~~~~~WVGw~g~~~~~~~~~~~~~~~-l~~~~~~pV 167 (934)
T PLN03064 93 RQRLLVVANRLPVSAVRRGE--DSWSLEISAGGLVSALLG-V-KEFEARWIGWAGVNVPDEVGQKALTKA-LAEKRCIPV 167 (934)
T ss_pred CCCEEEEECCCCcceeecCC--CceEEeECCCCcHHHhcc-c-ccCCeEEEeeCCCCCCCcchhHHHHHH-hccCceEEE
Confidence 68999999999999988765 689999999999999975 5 568999999999876653 45555444 578999999
Q ss_pred eCChHhHhhHhhhccccccccccccCC-CCCCC-CCCccChhhHHHHHHHHHHHHHHHHhhcCCCCCEEEEeCcccchHH
Q 002955 137 FIPPELFSKFYHGFCKQHLWPLFHYML-PLSPD-LGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLP 214 (863)
Q Consensus 137 ~l~~~~~~~~y~gf~~~~lWpl~H~~~-~~~~~-~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~p~~D~VwvhDyhl~llp 214 (863)
||+++++++||+||||++|||+|||+. +..+. ...+|++..|++|++||++||++|++.++| +|+|||||||||+||
T Consensus 168 ~l~~~~~~~~Y~gfcn~~LWPlfHy~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-gD~VWVHDYHL~LlP 246 (934)
T PLN03064 168 FLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEE-GDVVWCHDYHLMFLP 246 (934)
T ss_pred eCCHHHHHHHHHHhhhcccchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEecchhhHHH
Confidence 999999999999999999999999973 22110 114688899999999999999999999998 499999999999999
Q ss_pred HHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEEEc
Q 002955 215 TFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYF 294 (863)
Q Consensus 215 ~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~ 294 (863)
.|||+++|+++||||||||||++|+|||||+|++||+|||+||+|||||++|+|||++||+|+||++... .++.++
T Consensus 247 ~~LR~~~p~~~IGfFlHiPFPs~Eifr~LP~r~elL~glL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~----~~v~~~ 322 (934)
T PLN03064 247 KCLKEYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTP----EGVEDQ 322 (934)
T ss_pred HHHHHhCCCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCccccC----CeEEEC
Confidence 9999999999999999999999999999999999999999999999999999999999999999998644 258899
Q ss_pred CeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEE
Q 002955 295 GRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLV 374 (863)
Q Consensus 295 gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLv 374 (863)
||.++|+++|+|||++.|...+..|++.+++++++++++|+++||||||||++|||.+||+||++||++||+|++|||||
T Consensus 323 Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLv 402 (934)
T PLN03064 323 GRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLL 402 (934)
T ss_pred CEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHhCCceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeee
Q 002955 375 QIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIIC 454 (863)
Q Consensus 375 qi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~ 454 (863)
||++|+|+++++|+++++++.++|++||++||+.+|+||+++.+.++++|+.|||++|||||+||+|||||||++|||||
T Consensus 403 QIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~Eyva~ 482 (934)
T PLN03064 403 QIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVAC 482 (934)
T ss_pred EEcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCcccccccCCCCCCCCCccEEecccccCcccC-CCceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCC
Q 002955 455 RQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-SGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHD 533 (863)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l-~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~ 533 (863)
|.+ +.|+||+|||+|++++| .+|++|||||++++|+||.+||+|+++||+.|+++++++|.+||
T Consensus 483 ~~~---------------~~GvLILSEfaGaa~~L~~~AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~~d 547 (934)
T PLN03064 483 QDS---------------KKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHVTTHT 547 (934)
T ss_pred hcC---------------CCCCeEEeCCCchHHHhCCceEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccCC
Confidence 874 47999999999999999 58999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccccccccCcCcceeEeecCcccccCCHHHHHHHHHhcccceeEecCCccccCCCCC----
Q 002955 534 VAYWARSFLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAILLDYDGTIMVPGSI---- 609 (863)
Q Consensus 534 ~~~W~~~~l~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~~---- 609 (863)
+.+|+++|+++|.++..++.. ++. . -+++|+.+.+.++|++++.++|++||||||++..+.
T Consensus 548 ~~~Wa~~fl~~L~~~~~~~~~-~~~-----------~---~~~~l~~~~~~~~y~~a~~RLlfLDyDGTLap~~~~P~~~ 612 (934)
T PLN03064 548 AQEWAETFVSELNDTVVEAQL-RTR-----------Q---VPPQLPPEDAIQRYLQSNNRLLILGFNATLTEPVDTPGRR 612 (934)
T ss_pred HHHHHHHHHHHHHHHHhhhhc-ccc-----------c---cCCCCCHHHHHHHHHhccceEEEEecCceeccCCCCcccc
Confidence 999999999999988655421 111 1 124799999999999999999999999999985422
Q ss_pred -------CCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcEEEEeCCceeEEe-ecCCCCcc
Q 002955 610 -------STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWET-CVSVPDFS 681 (863)
Q Consensus 610 -------~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa~I~~~~~~~w~~-~~~~~~~~ 681 (863)
...|+++++++|++||+++++.|+|+|||+...+++|++.+ +++++|+||++++.++ ..|.. .....+..
T Consensus 613 ~~~~~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~-~L~LaAEHG~~~R~~~-~~w~~~~~~~~~~~ 690 (934)
T PLN03064 613 GDQIKEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEF-DMWLAAENGMFLRHTK-GEWMTTMPEHLNMD 690 (934)
T ss_pred cccccccccCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCC-CceEEeeCCeEEecCC-CcceeccccccchH
Confidence 33478999999999999999999999999999999999887 7999999999998764 46874 33333568
Q ss_pred HHHHHHHHHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHH-HHHhcCCCeEEEECCcEEEEecCCCCHH
Q 002955 682 WKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHL-ESVLANEPVSVKSGPNIVEVKPQGVNKG 760 (863)
Q Consensus 682 w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L-~~~l~~~~~~v~~g~~~vEI~p~gvsKG 760 (863)
|++.+.++|+.|++++||+++|.|+++++|||+.+||+++..|++++.++| +..+.+.++.+..|+.++||+|.++|||
T Consensus 691 W~~~v~~ile~~~eRtPGS~IE~K~~SLawHYR~ADpe~g~~qA~el~~~L~~~~~~~~~v~V~~Gk~VVEVrP~gvnKG 770 (934)
T PLN03064 691 WVDSVKHVFEYFTERTPRSHFETRETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVEVRPVGVTKG 770 (934)
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEcCcEEEEEecCCChhhHHHHHHHHHHHHHhhhccCCCcEEEeCCeEEEEEcCCCCHH
Confidence 999999999999999999999999999999999999999999999999999 4455677899999999999999999999
Q ss_pred HHHHHHHHHHhhcC---CCcceEEEEeCCcc-hHHHHHHhhhhcCCC------------------------------CC-
Q 002955 761 LVAQHQLETMHQKG---MLPDFVLCIGDDRS-DEDMFEVIKSAAAGP------------------------------SL- 805 (863)
Q Consensus 761 ~al~~Ll~~l~~~g---i~~d~vlaiGD~~N-D~~Mf~~ag~~~~~~------------------------------~~- 805 (863)
.|+++|++++...+ .++|||+|+|||.. ||+||+++....... +.
T Consensus 771 ~Av~~ll~~~~~~~~~~~~~DFvlc~GDd~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 850 (934)
T PLN03064 771 AAIDRILGEIVHSKSMTTPIDYVLCIGHFLGKDEDIYTFFEPELPSDSPAIARSRSPDGLKSSGDRRPSGKLPSSRSNSK 850 (934)
T ss_pred HHHHHHHHhhhhccccCCCCCEEEEeCCCCCCcHHHHHHHhccCCcccccccccccCCcccCCccccccCCCcccccccc
Confidence 99999999764322 36899999999875 999999986421100 00
Q ss_pred -------------------------------C----------CCcceEEEEeCCCccccceecCCHhHHHHHHHHHHHhh
Q 002955 806 -------------------------------S----------PVAEVFACTVGQKPSKAKYYLDDTAEILRMLLGLAEAS 844 (863)
Q Consensus 806 -------------------------------~----------~~~~~~av~vG~~~s~A~y~l~d~~eV~~~L~~L~~~~ 844 (863)
+ ...+.|+|+||.|+|.|+|++++.+||+.+|+.|++.+
T Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (934)
T PLN03064 851 NSQGKKQRSLLSSAKSGVNHAASHGSDRRPSPEKIGWSVLDLKGENYFSCAVGRKRSNARYLLGSSDDVVSFLKELANAS 930 (934)
T ss_pred ccccccCCcccccccccccccccCCccccCCccccccccccccCcceEEEEeccccccceeecCCHHHHHHHHHHHhccc
Confidence 0 12345999999999999999999999999999999876
Q ss_pred cC
Q 002955 845 AQ 846 (863)
Q Consensus 845 ~~ 846 (863)
..
T Consensus 931 ~~ 932 (934)
T PLN03064 931 SS 932 (934)
T ss_pred cC
Confidence 54
No 3
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=2.1e-151 Score=1367.46 Aligned_cols=749 Identities=37% Similarity=0.688 Sum_probs=668.3
Q ss_pred CCCCcEEEEEcCCccceeeCCCCCCCeEEEeCCCchHHHhhhcccCCCceEEEeccCccccch-hhhhHHHhhccCceEE
Q 002955 56 VSQERMIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLS-EQDEVSQTLLETFKCV 134 (863)
Q Consensus 56 ~~~~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~-~~~~~~~~~~~~~~~~ 134 (863)
....|+||||||||+.++++++ |+|++++++|||+++|.+ + ...+++||||+|.+++++ ++..+. ..+.+|+|+
T Consensus 8 ~~~~rliiVsnrlp~~~~~~~~--~~~~~~~~~ggl~~al~~-~-~~~~~~Wvgw~g~~~~~~~~~~~~~-~~~~~~~~~ 82 (797)
T PLN03063 8 GERPRLLVVANRLPVSAKRTGE--DSWSLEMSPGGLVSALLG-V-KEFETKWIGWPGVDVHDEIGKAALT-ESLAEKGCI 82 (797)
T ss_pred cCCCCEEEEECCCCccceecCC--CceEEeeCCCCHHHHHHH-H-HhcCceEEEeCCCcCCcccchhHHH-HHhhcCCeE
Confidence 4577999999999999888754 689999999999999975 4 457999999999876554 333333 345789999
Q ss_pred EeeCChHhHhhHhhhccccccccccccC-CCCCCCC-CCccChhhHHHHHHHHHHHHHHHHhhcCCCCCEEEEeCcccch
Q 002955 135 PAFIPPELFSKFYHGFCKQHLWPLFHYM-LPLSPDL-GGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMV 212 (863)
Q Consensus 135 pv~l~~~~~~~~y~gf~~~~lWpl~H~~-~~~~~~~-~~~~~~~~w~~Y~~vN~~fa~~i~~~~~p~~D~VwvhDyhl~l 212 (863)
|||| ++++++||+||||++|||+|||+ .+..+.. ..+|+++.|++|++||++||++|++.++| +|+|||||||||+
T Consensus 83 pv~l-~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-~d~vWvhDYhL~l 160 (797)
T PLN03063 83 PVFL-NEVFDQYYNGYCNNILWPIFHYMGLPQEDRHDATRTFESQYDAYKKANRMFLDVVKENYEE-GDVVWCHDYHLMF 160 (797)
T ss_pred Eeeh-HHHHHHHHHHHHhhhcchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEecchhhh
Confidence 9999 99999999999999999999998 3322221 14566789999999999999999999998 4999999999999
Q ss_pred HHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEE
Q 002955 213 LPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLE 292 (863)
Q Consensus 213 lp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~ 292 (863)
||+|||+++|+++||||||||||++|+||+||+|++||+|||+||+|||||++|+|||++||+|++|+++... ++.
T Consensus 161 lp~~lR~~~~~~~igfFlHiPFPs~e~fr~lp~r~~il~gll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~----~i~ 236 (797)
T PLN03063 161 LPQYLKEYNNKMKVGWFLHTPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHE----GVV 236 (797)
T ss_pred HHHHHHHhCCCCcEEEEecCCCCCHHHHhhCCCHHHHHHHHhcCCEEEeCCHHHHHHHHHHHHHHhCccccCC----ceE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999876442 478
Q ss_pred EcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceE
Q 002955 293 YFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIV 372 (863)
Q Consensus 293 ~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vv 372 (863)
++||.++|.++|+|||++.|......+++.....+++++++++++|++|||+|+.|||.++|+||++||++||+++++++
T Consensus 237 ~~gr~~~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvv 316 (797)
T PLN03063 237 DQGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVM 316 (797)
T ss_pred ECCeEEEEEEEecccCHHHHHHHhcChhHHHHHHHHHHhcCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEE
Confidence 99999999999999999999987777777788888999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeee
Q 002955 373 LVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYI 452 (863)
Q Consensus 373 Lvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~ 452 (863)
||||+.|+|+++++|+++++++.+++++||++||+.+|.||+++.+.++.+++.++|++|||||+||++||||||++|||
T Consensus 317 Lvqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEam 396 (797)
T PLN03063 317 LVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFV 396 (797)
T ss_pred EEEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCcccccccCCCCCCCCCccEEecccccCcccC-CCceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhcc
Q 002955 453 ICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-SGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVST 531 (863)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l-~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~ 531 (863)
||+.+ +.|++|+|||+|+++++ .+|++|||||++++|+||.++|+|+++||+.|++++++++.+
T Consensus 397 A~g~p---------------~~gvlVlSe~~G~~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~v~~ 461 (797)
T PLN03063 397 ACQKA---------------KKGVLVLSEFAGAGQSLGAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKT 461 (797)
T ss_pred eeecC---------------CCCCEEeeCCcCchhhhcCCeEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhh
Confidence 99875 47999999999999999 489999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHhhccccccccCcCcceeEeecCcccccCCHHHHHHHHHhcccceeEecCCccccCCCC---
Q 002955 532 HDVAYWARSFLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAILLDYDGTIMVPGS--- 608 (863)
Q Consensus 532 ~~~~~W~~~~l~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~--- 608 (863)
||+.+|+++|+++|.++++.+..+. ...+.+|+.+.+.++|++++.++|++||||||++..+
T Consensus 462 ~~~~~Wa~~fl~~l~~~~~~~~~~~---------------~~~~~~l~~~~~~~~y~~a~~rll~LDyDGTL~~~~~~~~ 526 (797)
T PLN03063 462 HSAQKWADDFMSELNDIIVEAELRT---------------RNIPLELPEQDVIQQYSKSNNRLLILGFYGTLTEPRNSQI 526 (797)
T ss_pred CCHHHHHHHHHHHHHHHhhhhhhcc---------------cCCCCCCCHHHHHHHHHhccCeEEEEecCccccCCCCCcc
Confidence 9999999999999999887653211 1234579999999999999999999999999998543
Q ss_pred --CCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcEEEEeCCceeEEeec-CCCCccHHHH
Q 002955 609 --ISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWETCV-SVPDFSWKQI 685 (863)
Q Consensus 609 --~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa~I~~~~~~~w~~~~-~~~~~~w~~~ 685 (863)
....++++++++|++||+++++.|+|+|||+...+++|++.+ +++++|+||++++.. +..|.... ...+..|++.
T Consensus 527 ~p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~-~l~l~aeHG~~~r~~-~~~w~~~~~~~~~~~w~~~ 604 (797)
T PLN03063 527 KEMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEY-NIWLAAENGMFLRHT-SGEWVTTMPEHMNLDWVDG 604 (797)
T ss_pred ccccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCC-CCcEEEeCCEEEecC-CCceeeccccccChhHHHH
Confidence 235589999999999999999999999999999999999875 799999999999875 45787543 2335689999
Q ss_pred HHHHHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHH-HhcCCCeEEEECCcEEEEecCCCCHHHHHH
Q 002955 686 AEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLES-VLANEPVSVKSGPNIVEVKPQGVNKGLVAQ 764 (863)
Q Consensus 686 v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~-~l~~~~~~v~~g~~~vEI~p~gvsKG~al~ 764 (863)
+.++++.|++++||+++|.|++++.|||+++||+++..+++++.++|.+ .+.+.++.+..|+..+||+|.++|||.|++
T Consensus 605 v~~~l~~~~~rtpGs~iE~K~~sla~HyR~adp~~g~~~a~el~~~l~~~~~~~~~~~v~~Gk~vvEvrp~gvnKG~Av~ 684 (797)
T PLN03063 605 VKNVFKYFTDRTPRSYVEKSETSLVWNYEYADVEFGRAQARDMLQHLWAGPISNASVDVVRGQKSVEVHAIGVTKGAAIG 684 (797)
T ss_pred HHHHHHHHHHhCCCcEEEEcCeEEEEEcCCCChHHHHHHHHHHHHHHHHhhccCCCcEEEECCeEEEEEcCCCChHHHHH
Confidence 9999999999999999999999999999999999998999999999844 456677999999999999999999999999
Q ss_pred HHHHHHhhc---CCCcceEEEEeCCc-chHHHHHHhhhhc-C-------CCC-----------CCCCcceEEEEeCCCcc
Q 002955 765 HQLETMHQK---GMLPDFVLCIGDDR-SDEDMFEVIKSAA-A-------GPS-----------LSPVAEVFACTVGQKPS 821 (863)
Q Consensus 765 ~Ll~~l~~~---gi~~d~vlaiGD~~-ND~~Mf~~ag~~~-~-------~~~-----------~~~~~~~~av~vG~~~s 821 (863)
.|++++..+ +..+|+|+|+||+. .||+||++++... . ..+ ....+++|+|+||.++|
T Consensus 685 ~ll~~~~~~~~~~~~~dfvl~~Gdd~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VG~~~s 764 (797)
T PLN03063 685 RILGEIVHNKSMTTPIDFVFCSGYFLEKDEDVYTFFEPEILSKKKSSSSNYSDSDKKVSSNLVDLKGENYFSCAIGQART 764 (797)
T ss_pred HHHHHhhhccccCCCCCEEEEeCCCCCCcHHHHHhccccccccccccccccccccccccccccccccCceEEEEECCCCc
Confidence 999976322 23679999999984 6999999987421 0 000 12345789999999999
Q ss_pred ccceecCCHhHHHHHHHHHHHhhcCc
Q 002955 822 KAKYYLDDTAEILRMLLGLAEASAQD 847 (863)
Q Consensus 822 ~A~y~l~d~~eV~~~L~~L~~~~~~~ 847 (863)
+|+||++|++||.++|+.|++.+.+.
T Consensus 765 ~A~y~l~~~~eV~~lL~~l~~~~~~~ 790 (797)
T PLN03063 765 KARYVLDSSNDVVSLLHKLAVANTTM 790 (797)
T ss_pred cCeecCCCHHHHHHHHHHHhccCccc
Confidence 99999999999999999999865543
No 4
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=100.00 E-value=3.8e-142 Score=1291.02 Aligned_cols=720 Identities=37% Similarity=0.668 Sum_probs=657.9
Q ss_pred CcEEEEEcCCccceeeCCCCCCCeEEEeCCCchHHHhhhcccCCCceEEEeccCccccc---hhhhhHHHhhccCceEEE
Q 002955 59 ERMIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDL---SEQDEVSQTLLETFKCVP 135 (863)
Q Consensus 59 ~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~---~~~~~~~~~~~~~~~~~p 135 (863)
+|+||||||+|+.+++++ |+|++++++|||+.+|.+.+. ..+++||||+|.+.+. +++.++. ..+.+|+|+|
T Consensus 1 ~~livvsnr~p~~~~~~~---~~~~~~~~~ggl~~~l~~~~~-~~~~~wvg~~g~~~~~~~~~~~~~~~-~~~~~~~~~~ 75 (726)
T PRK14501 1 SRLIIVSNRLPVTVVRED---GGVELTPSVGGLATGLRSFHE-RGGGLWVGWPGLDLEEESEEQRARIE-PRLEELGLVP 75 (726)
T ss_pred CCEEEEEcCCCcceeecC---CceEEeeCCCchHHHHHHHhh-cCCeEEEEeCCCCccccchhhhhhhh-hhccCceEEE
Confidence 489999999999988764 589999999999999987655 5799999999976553 2223333 4467899999
Q ss_pred eeCChHhHhhHhhhccccccccccccCCCCCCCCCCccChhhHHHHHHHHHHHHHHHHhhcCCCCCEEEEeCcccchHHH
Q 002955 136 AFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPT 215 (863)
Q Consensus 136 v~l~~~~~~~~y~gf~~~~lWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~p~~D~VwvhDyhl~llp~ 215 (863)
|||++++++.||+||||++|||+|||+++. ..|++++|++|++||++||++|++.++|+ |+|||||||||+||.
T Consensus 76 v~l~~~~~~~~y~gf~n~~lWp~~H~~~~~-----~~~~~~~w~~Y~~vN~~fA~~~~~~~~~~-d~vwvhDYhl~l~p~ 149 (726)
T PRK14501 76 VFLSAEEVDRYYEGFCNSTLWPLFHYFPEY-----TEFEDRFWESYERVNQRFAEAIAAIARPG-DVVWVHDYQLMLLPA 149 (726)
T ss_pred EeCCHHHHHHHHHHhhhccccchhcccCcc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEeCchhhhHHH
Confidence 999999999999999999999999999866 48999999999999999999999999984 999999999999999
Q ss_pred HHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEEEcC
Q 002955 216 FLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFG 295 (863)
Q Consensus 216 ~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~g 295 (863)
+||++.|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||.+++++++... ++.++|
T Consensus 150 ~lr~~~~~~~igfFlH~pfP~~~~f~~lp~~~~ll~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~~----~~~~~g 225 (726)
T PRK14501 150 MLRERLPDARIGFFLHIPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELG----EIRLGG 225 (726)
T ss_pred HHHhhCCCCcEEEEeeCCCCChHHHhhCCChHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCCC----eEEECC
Confidence 9999999999999999999999999999999999999999999999999999999999999999875432 588999
Q ss_pred eEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEE
Q 002955 296 RTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQ 375 (863)
Q Consensus 296 r~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvq 375 (863)
|.++|+++|+|||++.|.+....+.+....+++++.++++++|++|||+++.||+..+|+||++|++++|+++|+++|+|
T Consensus 226 r~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~ 305 (726)
T PRK14501 226 RIVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQ 305 (726)
T ss_pred EEEEEEEEECeEcHHHHHHHhcCchHHHHHHHHHHHcCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEE
Confidence 99999999999999999988877888888888998889999999999999999999999999999999999999999999
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeee
Q 002955 376 IANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICR 455 (863)
Q Consensus 376 i~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~ 455 (863)
|+.|+|...++|+++++++.+++++||++||..+|.||+++.+.++++|+.++|++|||||+||++||||||++|||||+
T Consensus 306 v~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~ 385 (726)
T PRK14501 306 VAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASR 385 (726)
T ss_pred EecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEc
Confidence 99999888899999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCcccccccCCCCCCCCCccEEecccccCcccCCCceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHH
Q 002955 456 QGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVA 535 (863)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~ 535 (863)
.+ +.|++|+|+++|+++++.+|++|||||++++|+||.++|+|+.+|++.|++++++++.+||+.
T Consensus 386 ~~---------------~~g~~vls~~~G~~~~l~~~llv~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~~~~~~ 450 (726)
T PRK14501 386 TD---------------GDGVLILSEMAGAAAELAEALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVH 450 (726)
T ss_pred CC---------------CCceEEEecccchhHHhCcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHH
Confidence 75 368999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccccccccCcCcceeEeecCcccccCCHHHHHHHHHhcccceeEecCCccccCCC--CCCCCC
Q 002955 536 YWARSFLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAILLDYDGTIMVPG--SISTSP 613 (863)
Q Consensus 536 ~W~~~~l~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~s~~rlI~~DlDGTLl~~~--~~~~~~ 613 (863)
.|+++|+++|.++++.+.... ...|++++.+.+.++|+.+++|+|++||||||++.. +....+
T Consensus 451 ~w~~~~l~~l~~~~~~~~~~~---------------~~~~~~~~~~~~~~~y~~~~~rLi~~D~DGTL~~~~~~~~~~~~ 515 (726)
T PRK14501 451 KWASDFLDELREAAEKNKAFA---------------SKPITPAAAEEIIARYRAASRRLLLLDYDGTLVPFAPDPELAVP 515 (726)
T ss_pred HHHHHHHHHHHHHHhhhhccc---------------cccCCccCHHHHHHHHHhccceEEEEecCccccCCCCCcccCCC
Confidence 999999999999887653211 123567899999999999999999999999999843 234568
Q ss_pred CHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcEEEEeCCceeEEeecCCCCccHHHHHHHHHHHH
Q 002955 614 NAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLY 693 (863)
Q Consensus 614 s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa~I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~y 693 (863)
+++++++|++|++++|+.|+|+|||+...++++++.+ +++++++||++++.++ ..|..... .+..|++.+.++++.|
T Consensus 516 ~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~-~l~liaenG~~i~~~~-~~w~~~~~-~~~~w~~~v~~il~~~ 592 (726)
T PRK14501 516 DKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDL-PIHLVAEHGAWSRAPG-GEWQLLEP-VATEWKDAVRPILEEF 592 (726)
T ss_pred CHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCC-CeEEEEeCCEEEeCCC-CceEECCC-cchhHHHHHHHHHHHH
Confidence 9999999999988899999999999999999999876 5899999999998654 46765432 3568999999999999
Q ss_pred hhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhc
Q 002955 694 TETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQK 773 (863)
Q Consensus 694 ~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~ 773 (863)
.++++|++++.|+.+++|||+++|++++..+++++.++++..+.+.++.+.+|+.++||+|+++|||.|++++++
T Consensus 593 ~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~----- 667 (726)
T PRK14501 593 VDRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLE----- 667 (726)
T ss_pred HhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHh-----
Confidence 999999999999999999999999999888889999999988888888899999999999999999999999998
Q ss_pred CCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCCccccceecCCHhHHHHHHHHHHH
Q 002955 774 GMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILRMLLGLAE 842 (863)
Q Consensus 774 gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~A~y~l~d~~eV~~~L~~L~~ 842 (863)
++++++++||||+.||++||+.++.. .++|+||++++.|+|+++++++|+++|+.|++
T Consensus 668 ~~~~d~vl~~GD~~nDe~Mf~~~~~~-----------~~~v~vG~~~s~A~~~l~~~~eV~~~L~~l~~ 725 (726)
T PRK14501 668 AGPYDFVLAIGDDTTDEDMFRALPET-----------AITVKVGPGESRARYRLPSQREVRELLRRLLD 725 (726)
T ss_pred cCCCCEEEEECCCCChHHHHHhcccC-----------ceEEEECCCCCcceEeCCCHHHHHHHHHHHhc
Confidence 56789999999999999999997531 27999999999999999999999999999875
No 5
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.6e-132 Score=1161.40 Aligned_cols=728 Identities=55% Similarity=0.976 Sum_probs=688.0
Q ss_pred CCcEEEEEcCCccceeeCCCCCCCeEEEeCCCchHHHhhhcccCCCceEEEeccCccccchhhhhHHHhhccCceEEEee
Q 002955 58 QERMIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSEQDEVSQTLLETFKCVPAF 137 (863)
Q Consensus 58 ~~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~ 137 (863)
..|+|+|||+||+.+.+..++ +.|.|+++.+||+.+++.++. +++..||||++.++++++++.+.+.++..++|+||+
T Consensus 2 ~~r~i~vsn~lp~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~-~~~~~~vg~~~~~~~~~~~~~~~~~~~~~~~~~pv~ 79 (732)
T KOG1050|consen 2 RPRIIVVSNRLPLKASKRTDT-GKWSFSFSPGSLVSQLKGIFR-EMEVKWVGPLGDELDDSEKEDVSQELLEEFDSVPVF 79 (732)
T ss_pred CceEEEEEccCceecccccCC-CceeeecCCCCchhhhhcccc-cceeeEEeeccccCchhhHhHhhhhhhhhcCceeee
Confidence 569999999999999666555 799999999999999988766 689999999998899999999999999999999999
Q ss_pred CChHhHhhHhhhccccccccccccC-CCCCCCCCCccChhhHHHHHHHHHHHHHHHHhhcCCCCCEEEEeCcccchHHHH
Q 002955 138 IPPELFSKFYHGFCKQHLWPLFHYM-LPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTF 216 (863)
Q Consensus 138 l~~~~~~~~y~gf~~~~lWpl~H~~-~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~p~~D~VwvhDyhl~llp~~ 216 (863)
++++....+|+||||+.|||+|||+ .|..+.+. .|+.+.|++|+++|+.||+++++.++ ++|+|||||||||++|+|
T Consensus 80 ~~~~~~~~~y~~~~~~ilwP~~hy~~~p~~~~~~-~~~~~~w~~y~~~n~~f~d~ive~~~-~~d~vwihdyhlmllp~~ 157 (732)
T KOG1050|consen 80 LDDELFDSYYNGYCKSILWPLFHYMLIPSEPAFK-LFDLELWKAYVKVNQAFADKIVEVYE-EGDIVWIHDYHLMLLPQM 157 (732)
T ss_pred cCCchhhhhhhhhhhhcccceeecccCCCchhhh-hhHHHHHHHHHHHhHHHHHHHHHhcc-CCCcEEEEcchhhccchh
Confidence 9999999999999999999999999 67666654 78899999999999999999999999 579999999999999999
Q ss_pred HHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCe
Q 002955 217 LRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGR 296 (863)
Q Consensus 217 lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr 296 (863)
+|++.++++||||+|+|||++|+|||+|.|+|||+||++||+|||||++|+|||++||.|++++++.++.+..++.+.||
T Consensus 158 lr~~~~~~~ig~flhspfpssEi~r~lp~r~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr 237 (732)
T KOG1050|consen 158 LRERFNSAKIGFFLHSPFPSSEIYRCLPVRKEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVASKFPTAGVSGRGR 237 (732)
T ss_pred hhcccccceEEEeccCCCChHHHHHhcccHHHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhccCCcceEEeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEE
Q 002955 297 TVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQI 376 (863)
Q Consensus 297 ~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi 376 (863)
.+.|.++|+|||+.+|......+.+..+..++++.++|+++|++|||+|+.||+.+++.||+++|++||+|+++|+|+||
T Consensus 238 ~~~v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi 317 (732)
T KOG1050|consen 238 DVSVKALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQI 317 (732)
T ss_pred eeeeeecccccchHHhhccccchhHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeec
Q 002955 377 ANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQ 456 (863)
Q Consensus 377 ~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~ 456 (863)
++|+++++++|++++.++..++.+||++||+..++||+++...++..++.|+|.+||||+++++||||||+++||++|++
T Consensus 318 ~~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~ 397 (732)
T KOG1050|consen 318 ENPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQE 397 (732)
T ss_pred ecCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCcccccccCCCCCCCCCccEEecccccCcccC-CCceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHH
Q 002955 457 GNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-SGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVA 535 (863)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l-~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~ 535 (863)
. +.+++|+|||+|+++.+ ++++++||||.+++|.+|..||+|+++|++.|+.+++.++..|++.
T Consensus 398 ~---------------~~~~lVlsef~G~~~tl~d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~~ 462 (732)
T KOG1050|consen 398 N---------------KKSVLVLSEFIGDDTTLEDAAIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDVV 462 (732)
T ss_pred c---------------cCCceEEeeeccccccccccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhHH
Confidence 5 47999999999999999 8899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccccccccCcCcceeEeecCcccccCCHHHHHHHHHhcccceeEecCCccccCCCCCCCCCCH
Q 002955 536 YWARSFLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAILLDYDGTIMVPGSISTSPNA 615 (863)
Q Consensus 536 ~W~~~~l~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~ 615 (863)
+|+..|++.| ++||+.|+ +.+++..+ |+.+.++..|+++++|+|++|||||+++..+..
T Consensus 463 ~W~~~~~~~l---------~~~~~~~~-~~~~~~~~------l~~~~~i~~y~~s~~rli~ldyd~t~~~~~~~~----- 521 (732)
T KOG1050|consen 463 YWAKSFLQGL---------KRIWKVGF-LGFRVTPL------LTAEHIVSDYKKSKKRLILLDYDLTLIPPRSIK----- 521 (732)
T ss_pred HHHHHHHHhh---------hhhhhhcc-cccccccc------cChhHhhhhhhhccceEEEecccccccCCCCch-----
Confidence 9999999833 45788888 88887665 889999999999999999999999999854322
Q ss_pred HHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcEEEEeCCceeEEeecCCCCccHHHHHHHHHHHHhh
Q 002955 616 EAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTE 695 (863)
Q Consensus 616 ~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa~I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~~ 695 (863)
++..|+.||.+++|.|+|+|||++..+..|+..++++|++||||++++.+++ |.+.. .+.+|++.+++++++|++
T Consensus 522 -~~~~l~~L~~dp~n~v~i~s~~~r~~l~~~~~~~~~lgl~aEhG~f~r~~~~--w~~~~--~~~~w~~~v~~i~~~~~e 596 (732)
T KOG1050|consen 522 -AISILKDLCSDPKNIVYIVSGRGRSVLEKWFFGCKNLGLAAEHGYFVRIPGK--WETCV--LDLDWKDLVKDIFQYYTE 596 (732)
T ss_pred -HHHHHHHHhcCCCCeEEEEEccCchhhhhhccccccceeecccCceeccCCc--eeeec--ccccHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999987 99887 788999999999999999
Q ss_pred cCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCC
Q 002955 696 TTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGM 775 (863)
Q Consensus 696 ~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi 775 (863)
+|||+++|.|+++++|||+++||+++..||++++++|+. .+.++.+..|+..|||.|.|+|||.++..++..+ .-
T Consensus 597 rt~GS~ie~k~~~l~~hy~~ad~~~g~~qA~el~~~l~~--~~~~~~v~~g~~~Vev~~~gvsk~~~~~~~~~~~---~~ 671 (732)
T KOG1050|consen 597 RTPGSYIERKETALVWHYRNADPEFGELQAKELLEHLES--KNEPVEVVRGKHIVEVRPQGVSKGLAAERILSEM---VK 671 (732)
T ss_pred cCCCceecccCceEEEeeeccCcchhHHHHHHHHHHhcc--cCCCeEEEecCceEEEcccccchHHHHHHHHHhc---CC
Confidence 999999999999999999999999999999999999998 7889999999999999999999999999999998 56
Q ss_pred CcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCCccccceecCCHhHHHHHHH
Q 002955 776 LPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILRMLL 838 (863)
Q Consensus 776 ~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~A~y~l~d~~eV~~~L~ 838 (863)
++|+++|+||+..|++||..+......... ...|+|++|.++|+|+|+++++.+|+++|+
T Consensus 672 ~~df~~c~g~d~tDed~~~~~~~~~~~~~~---~~~F~~~~g~~~t~a~~~~~~~~~v~~~l~ 731 (732)
T KOG1050|consen 672 EPDFVLCIGDDRTDEDMFEFISKAKDPEKV---EEIFACTVGQKPSKAKYFLDDTHEVIRLLQ 731 (732)
T ss_pred CcceEEEecCCCChHHHHHHHhhccCCccc---ceEEEEEcCCCCcccccccCChHHHHhhcc
Confidence 679999999999999999999875432221 578999999999999999999999999886
No 6
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=100.00 E-value=8.9e-122 Score=1031.72 Aligned_cols=455 Identities=30% Similarity=0.566 Sum_probs=420.6
Q ss_pred CcEEEEEcCCccceeeCCCCCCCeEEEeCCCchHHHhhhcccCCCceEEEeccCccccchhhhhHHHhhccCceEEEeeC
Q 002955 59 ERMIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSEQDEVSQTLLETFKCVPAFI 138 (863)
Q Consensus 59 ~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~l 138 (863)
+|+||||||+|+.. + + +.+.|||+++|.+.+. ..+++||||+|...++ .+.+......+++|.||+|
T Consensus 2 ~rLivVSNRlp~~~-----~---~--~~~~GGL~~aL~~~l~-~~~g~WvGW~g~~~~~--~~~~~~~~~~~~~~~~v~L 68 (474)
T PRK10117 2 SRLVVVSNRIAPPD-----E---H--KASAGGLAVGILGALK-AAGGLWFGWSGETGNE--DQPLKKVKKGNITWASFNL 68 (474)
T ss_pred CCEEEEECCCcCCC-----C---C--CcCCCCcHHHHHHHHH-hcCceEEEecCCCCCC--cccchhhhcCCceEEEecC
Confidence 68999999999622 1 1 3456899999998775 4799999999964322 2223333346799999999
Q ss_pred ChHhHhhHhhhccccccccccccCCCCCCCCCCccChhhHHHHHHHHHHHHHHHHhhcCCCCCEEEEeCcccchHHHHHH
Q 002955 139 PPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLR 218 (863)
Q Consensus 139 ~~~~~~~~y~gf~~~~lWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~p~~D~VwvhDyhl~llp~~lr 218 (863)
+++++++||+||||++|||+|||+.+. ..|+++.|++|++||++||++|++.++| +|+|||||||||+||.+||
T Consensus 69 ~~~~~~~yY~gfsn~~LWPlfHy~~~~-----~~~~~~~w~~Y~~VN~~FA~~v~~~~~~-~D~VWVHDYhL~llp~~LR 142 (474)
T PRK10117 69 SEQDYDEYYNQFSNAVLWPAFHYRLDL-----VQFQRPAWEGYLRVNALLADKLLPLLKD-DDIIWIHDYHLLPFASELR 142 (474)
T ss_pred CHHHHHHHHhhhhhcchhhhhCCCCCc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeccHhhHHHHHHH
Confidence 999999999999999999999999765 5899999999999999999999999998 4999999999999999999
Q ss_pred hhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEE
Q 002955 219 KRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTV 298 (863)
Q Consensus 219 ~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~ 298 (863)
++.|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||++++|++.... ..+.++||.+
T Consensus 143 ~~~~~~~IgFFlHiPFPs~eifr~LP~r~eil~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~---~~v~~~gr~v 219 (474)
T PRK10117 143 KRGVNNRIGFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSG---KSHTAWGKAF 219 (474)
T ss_pred HhCCCCcEEEEEeCCCCChHHHhhCCChHHHHHHHHhCccceeCCHHHHHHHHHHHHHHcCCcccCC---CeEEECCeEE
Confidence 9999999999999999999999999999999999999999999999999999999999999876432 2467889999
Q ss_pred EEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEec
Q 002955 299 SIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIAN 378 (863)
Q Consensus 299 ~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~ 378 (863)
+|+++|+|||++.|...+..+ ...++++++++++|+++|+||||+||+|||.++|+||++||++||+|+|||+|+||+.
T Consensus 220 ~v~~~PigID~~~~~~~a~~~-~~~~~~~lr~~~~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~ 298 (474)
T PRK10117 220 RTEVYPIGIEPDEIAKQAAGP-LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAP 298 (474)
T ss_pred EEEEEECeEcHHHHHHHhhch-HHHHHHHHHHHcCCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcC
Confidence 999999999999999887765 5677889999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCC
Q 002955 379 PARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGN 458 (863)
Q Consensus 379 p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~ 458 (863)
|+|+++++|++++++++++|++||++||+.+|+||+|+.+.++++++.|+|++||||+|||+|||||||++||+|||++
T Consensus 299 psR~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~- 377 (474)
T PRK10117 299 TSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDP- 377 (474)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeeecC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999874
Q ss_pred cccccccCCCCCCCCCccEEecccccCcccCCCceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHH
Q 002955 459 EKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWA 538 (863)
Q Consensus 459 ~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~ 538 (863)
+++|+||+|||+||+++|.+|++|||||++++|+||++||+||.+||+.|+++++++|.+||+.+|+
T Consensus 378 -------------~~~GvLILSefAGaA~~L~~AllVNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~ 444 (474)
T PRK10117 378 -------------ANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQ 444 (474)
T ss_pred -------------CCCccEEEecccchHHHhCCCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHH
Confidence 2479999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 002955 539 RSFLQDLERACR 550 (863)
Q Consensus 539 ~~~l~~l~~~~~ 550 (863)
++||.+|.++..
T Consensus 445 ~~fL~~L~~~~~ 456 (474)
T PRK10117 445 ECFISDLKQIVP 456 (474)
T ss_pred HHHHHHHHHhhh
Confidence 999999998754
No 7
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=100.00 E-value=6.8e-120 Score=1028.30 Aligned_cols=463 Identities=27% Similarity=0.477 Sum_probs=428.5
Q ss_pred EEcCCccceeeCCCCCCCeEEEeCCCchHHHhhhcccCCCceEEEeccCccccc-hhh-hhHHHhhccCceEEEeeCChH
Q 002955 64 VGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDL-SEQ-DEVSQTLLETFKCVPAFIPPE 141 (863)
Q Consensus 64 vsnrlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~-~~~-~~~~~~~~~~~~~~pv~l~~~ 141 (863)
||||||+.++++++|..+|.+++++|||+++|.+.+.+..+++||||+|.+.++ ++. +.+......+|+|.||+|+++
T Consensus 1 vsnRlP~~~~~~~~g~~~~~~~~s~gGL~~al~~~l~~~~~g~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~ 80 (487)
T TIGR02398 1 LYHRLPYDEFRGADGKLQRRDPTSPNGIIPTLLSFFGDGRAGTWVAWAEHDENSGETFDSHMTVPAEYKLTAARIPLSKE 80 (487)
T ss_pred CCcCCCceeEECCCCCceEEeccCCCchHHHHHHHhhcccceEEEeeCCCCcccccccccccccccCCceeEEEEeCCHH
Confidence 799999999997654235888999999999999877656789999999975221 111 112222245799999999999
Q ss_pred hHhhHhhhccccccccccccCCCCCCCCCCccChhhHHHHHHHHHHHHHHHHhhcCCCCCEEEEeCcccchHHHHHHhhC
Q 002955 142 LFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRF 221 (863)
Q Consensus 142 ~~~~~y~gf~~~~lWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~p~~D~VwvhDyhl~llp~~lr~~~ 221 (863)
+++.||+||||++|||+|||+.+. ..|+++.|++|++||++||++|++.++| +|+|||||||||+||.+||++.
T Consensus 81 ~~~~~Y~gf~n~~LWPlfH~~~~~-----~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-~d~vWVhDYhL~llp~~LR~~~ 154 (487)
T TIGR02398 81 QVDIFYHITSKEAFWPILHTFPER-----FQFREDDWQVFLKVNRAFAEAACLEAAE-GATVWVHDYNLWLVPGYIRQLR 154 (487)
T ss_pred HHHHHHhhhhhccccccccCCccc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEecchhhHHHHHHHHhC
Confidence 999999999999999999998654 5899999999999999999999999998 5999999999999999999999
Q ss_pred CCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHHHHHHHHhhhCceecccC---------------
Q 002955 222 NRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKR--------------- 286 (863)
Q Consensus 222 ~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~--------------- 286 (863)
|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||+|+||+++....
T Consensus 155 ~~~~IgfFlHiPFPs~eifr~LP~r~~ll~glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~ 234 (487)
T TIGR02398 155 PDLKIAFFHHTPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGE 234 (487)
T ss_pred CCCeEEEEeeCCCCChHHHhhCCchHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999998875432
Q ss_pred --ceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCHHHHHHHHHHHHHhC
Q 002955 287 --GYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQN 364 (863)
Q Consensus 287 --~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~ 364 (863)
..+++.++||+++|+++|+|||++.|...+..+++.++++++|+++.|+++|++|||+|++|||.++|+||++||++|
T Consensus 235 ~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~~~~~lr~~~~~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~ 314 (487)
T TIGR02398 235 ERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMERIRSELAGVKLILSAERVDYTKGILEKLNAYERLLERR 314 (487)
T ss_pred cccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHHHHHHHHHHcCCceEEEEecccccccCHHHHHHHHHHHHHhC
Confidence 123588999999999999999999999988889999999999999999999999999999999999999999999999
Q ss_pred CCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCC
Q 002955 365 PSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGM 444 (863)
Q Consensus 365 p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGm 444 (863)
|+++||++||||+.|+|++.++|++++++++++|++||++||+.+|+||+++.+.++++++.+||++||||++||+||||
T Consensus 315 Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrDGm 394 (487)
T TIGR02398 315 PELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGL 394 (487)
T ss_pred ccccCceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCCCceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHH
Q 002955 445 NLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEK 524 (863)
Q Consensus 445 nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~ 524 (863)
|||++||||||++ ++|+||+|||+||+++|.+|++|||||++++|+||.+||+||.+||+.|+++
T Consensus 395 NLVa~Eyva~~~~---------------~~GvLILSefaGaa~~l~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~ 459 (487)
T TIGR02398 395 NLVAKEYVAAQGL---------------LDGVLVLSEFAGAAVELKGALLTNPYDPVRMDETIYVALAMPKAEQQARMRE 459 (487)
T ss_pred CcchhhHHhhhcC---------------CCCCEEEeccccchhhcCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 9999999999874 4799999999999999999999999999999999999999999999999999
Q ss_pred HhhhhccCCHHHHHHHHHHHHHH
Q 002955 525 HYRYVSTHDVAYWARSFLQDLER 547 (863)
Q Consensus 525 ~~~~v~~~~~~~W~~~~l~~l~~ 547 (863)
++++|.+||+.+|+++||.+|..
T Consensus 460 l~~~v~~~d~~~W~~~fl~~l~~ 482 (487)
T TIGR02398 460 MFDAVNYYDVQRWADEFLAAVSP 482 (487)
T ss_pred HHHHHhhCCHHHHHHHHHHHhhh
Confidence 99999999999999999999864
No 8
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=100.00 E-value=1.7e-120 Score=1036.38 Aligned_cols=467 Identities=46% Similarity=0.882 Sum_probs=359.9
Q ss_pred cEEEEEcCCccceeeCCCCCCC--eEEEeCCCchHHHhhhcccCCCceEEEeccCccccchh--hhhHHHhhccCceEEE
Q 002955 60 RMIIVGNQLPLRAHRSSDGSGG--WTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSE--QDEVSQTLLETFKCVP 135 (863)
Q Consensus 60 r~iivsnrlP~~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~--~~~~~~~~~~~~~~~p 135 (863)
|+||||||||+.++++++. |. |+++.+.|||+++|.+.+ +..+++||||+|.+.+..+ ++.+.+.+.++|+|+|
T Consensus 2 ~livVsnrlPv~~~r~~~~-G~~~~~~~~~~ggL~~al~~l~-~~~~~~WvGw~g~~~~~~~~~~~~v~~~~~~~~~~~p 79 (474)
T PF00982_consen 2 RLIVVSNRLPVSVKRDPDD-GSWGWSWKPSAGGLVSALDPLL-KKRGGIWVGWPGVDVDEEEDEQDRVEPRLLDEYNCVP 79 (474)
T ss_dssp --------------------------GGGGS-HHHHHHHHHH-HHH-EEEEEEEEEES-TTS---EEEE---ETTEEEEE
T ss_pred Ccccccccccccccccccc-cccccccccCCCcHHHHHHHHH-hcCCCEEEEeCCCcCccccccccchhhhcccCceEEE
Confidence 7999999999999998733 45 888888999999997644 4589999999998876554 5667777889999999
Q ss_pred eeCChHhHhhHhhhccccccccccccCCCCCCCCCCccChhhHHHHHHHHHHHHHHHHhhcCCCCCEEEEeCcccchHHH
Q 002955 136 AFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPT 215 (863)
Q Consensus 136 v~l~~~~~~~~y~gf~~~~lWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~p~~D~VwvhDyhl~llp~ 215 (863)
|||+++++++||+||||++|||+|||.++..|+. ..|+++.|++|++||++||++|++.++| +|+|||||||||+||+
T Consensus 80 V~l~~~~~~~~Y~gf~n~~LWPlfHy~~~~~~~~-~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-~D~VWVhDYhL~llP~ 157 (474)
T PF00982_consen 80 VFLSPEEYDGYYNGFCNQVLWPLFHYRLDSRPDL-ARFEEEWWEAYKRVNRRFADAIAEVYRP-GDLVWVHDYHLMLLPQ 157 (474)
T ss_dssp EEE-HHHHHHHTTTHHHHTHHHHHTT-GG----G-----HHHHHHHHHHHHHHHHHHGGG--T-T-EEEEESGGGTTHHH
T ss_pred EEcCHHHHHHHHHhhhhhccCccccccccccccc-chhhHHHHHHHHHHHHHHHHHHHHhCcC-CCEEEEeCCcHHHHHH
Confidence 9999999999999999999999999987622222 6899999999999999999999999997 5999999999999999
Q ss_pred HHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEEEcC
Q 002955 216 FLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFG 295 (863)
Q Consensus 216 ~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~g 295 (863)
+||+++|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||++||+|++|+++.+.+| ++.++|
T Consensus 158 ~LR~~~~~~~IgfFlHiPFPs~e~fr~lP~r~eiL~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~--~v~~~G 235 (474)
T PF00982_consen 158 MLRERGPDARIGFFLHIPFPSSEIFRCLPWREEILRGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRG--TVEYNG 235 (474)
T ss_dssp HHHHTT--SEEEEEE-S----HHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE---EEETT
T ss_pred HHHhhcCCceEeeEEecCCCCHHHHhhCCcHHHHHHHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCc--eEEECC
Confidence 999999999999999999999999999999999999999999999999999999999999999999888766 689999
Q ss_pred eEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCC-CeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEE
Q 002955 296 RTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKG-QIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLV 374 (863)
Q Consensus 296 r~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~-~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLv 374 (863)
|.++|.++|+|||++.|...+.++++.++.+++++++++ +++|+||||+|++|||.+||+||++||++||+++|||+|+
T Consensus 236 r~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~~~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~li 315 (474)
T PF00982_consen 236 RRVRVGVFPIGIDPDAFAQLARSPEVQERAEELREKFKGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLI 315 (474)
T ss_dssp EEEEEEE------HHHHHHHHH-S---HHHHHHHHHTTT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEE
T ss_pred EEEEEEEeeccCChHHHHhhccChHHHHHHHHHHHhcCCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEE
Confidence 999999999999999999999999999999999999988 4999999999999999999999999999999999999999
Q ss_pred EEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeee
Q 002955 375 QIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIIC 454 (863)
Q Consensus 375 qi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~ 454 (863)
||+.|+|++.++|++++++++++|++||++||+.+|+||+++.+.++++++.|+|++||||++||+|||||||++||++|
T Consensus 316 Qi~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~ 395 (474)
T PF00982_consen 316 QIAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVAC 395 (474)
T ss_dssp EE--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHH
T ss_pred EEeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCcccccccCCCCCCCCCccEEecccccCcccCC-CceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCC
Q 002955 455 RQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS-GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHD 533 (863)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~-~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~ 533 (863)
|++ ++|+||+|||+|++++|. +|++|||||++++|+||.+||+||++||+.|+++++++|.+||
T Consensus 396 q~~---------------~~GvLiLSefaGaa~~L~~~al~VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~ 460 (474)
T PF00982_consen 396 QDD---------------NPGVLILSEFAGAAEQLSEAALLVNPWDIEEVADAIHEALTMPPEERKERHARLREYVREHD 460 (474)
T ss_dssp S-T---------------S--EEEEETTBGGGGT-TTS-EEE-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-
T ss_pred ecC---------------CCCceEeeccCCHHHHcCCccEEECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCC
Confidence 885 479999999999999997 6799999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 002955 534 VAYWARSFLQDLER 547 (863)
Q Consensus 534 ~~~W~~~~l~~l~~ 547 (863)
+.+|+++||++|++
T Consensus 461 ~~~W~~~~l~~L~~ 474 (474)
T PF00982_consen 461 VQWWAESFLRDLKR 474 (474)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhC
Confidence 99999999999974
No 9
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.1e-115 Score=969.69 Aligned_cols=467 Identities=40% Similarity=0.705 Sum_probs=433.1
Q ss_pred CCCCCCcEEEEEcCCccceeeCCCCCCCeEEEeCCCchHHHhhhcccCCCceEEEeccCccccchhhhhHHHhhccCceE
Q 002955 54 SSVSQERMIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSEQDEVSQTLLETFKC 133 (863)
Q Consensus 54 ~~~~~~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~ 133 (863)
+.....|+|+||||+|+...+..++ +...+..+.|||+++|++.+ ...+++|+||+|...++.+..........++..
T Consensus 10 ~~~~~~r~ivvsnR~p~~~~~~~~~-~~~~~~~s~ggL~~~l~~~~-~~~~~~W~gw~G~~~~~~~~~~~~~~~~~~~~~ 87 (486)
T COG0380 10 SPLEDSRLIVVSNRLPVKKTPEGDK-GIEFGKRSAGGLVTALKPLL-RVDGGTWIGWSGTTGPTDESSDDLKERIGEFTS 87 (486)
T ss_pred CcccCCcEEEEEccCCCcccccCCC-cceeeccCCcchhhhcchhh-HhhcceEEecCceeccccccchhhhhccccceE
Confidence 3456789999999999998766655 67888999999999997754 458999999999776433323333334568999
Q ss_pred EEeeCChHhHhhHhhhccccccccccccCCCCCCCCCCccChhhHHHHHHHHHHHHHHHHhhcCCCCCEEEEeCcccchH
Q 002955 134 VPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVL 213 (863)
Q Consensus 134 ~pv~l~~~~~~~~y~gf~~~~lWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~p~~D~VwvhDyhl~ll 213 (863)
.||+++.+++++||+||||++|||+|||+.+. ..|++.+|++|++||++|||+|++.++++ |+||||||||+||
T Consensus 88 ~~v~l~~~~~~~~Y~~fsn~iLWP~~Hy~~~~-----~~~~~~~w~~Y~~vN~~FAd~i~~~~~~g-DiIWVhDYhL~L~ 161 (486)
T COG0380 88 APVILSDEDYEGYYNGFSNAILWPLFHYFIDD-----VAYERNWWDAYVKVNRKFADKIVEIYEPG-DIIWVHDYHLLLV 161 (486)
T ss_pred EEEecCHHHHHHHHHHhhHhhhcceeeeecCc-----cccchHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEechhhhh
Confidence 99999999999999999999999999999875 58999999999999999999999999984 9999999999999
Q ss_pred HHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEE-
Q 002955 214 PTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLE- 292 (863)
Q Consensus 214 p~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~- 292 (863)
|.|||++.|+++||||||||||++|+|+|||+|+||++|||+||+|||||++|++||++||+|+++.... ..+.
T Consensus 162 P~mlR~~~~~~~IgfFlHiPfPssEvfr~lP~r~eIl~gll~~dligFqt~~y~~nF~~~~~r~~~~~~~-----~~~~~ 236 (486)
T COG0380 162 PQMLRERIPDAKIGFFLHIPFPSSEVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGD-----ADIRF 236 (486)
T ss_pred HHHHHHhCCCceEEEEEeCCCCCHHHHhhCchHHHHHHHhhcCCeeEecCHHHHHHHHHHHHHhcccccc-----ccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999986521 1233
Q ss_pred --EcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCC-CeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCC
Q 002955 293 --YFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKG-QIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRG 369 (863)
Q Consensus 293 --~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~-~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~ 369 (863)
++||.+.+.++|+|||+..|...+.++.+..+..++++.+.+ +++|+||||+||.|||.++++||++||++||+|+|
T Consensus 237 ~~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~ 316 (486)
T COG0380 237 NGADGRIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELGRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRG 316 (486)
T ss_pred cccCCceEEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHhcCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhC
Confidence 448999999999999999999999999998999999999976 99999999999999999999999999999999999
Q ss_pred ceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccce
Q 002955 370 KIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPY 449 (863)
Q Consensus 370 ~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~ 449 (863)
||+|+||+.|+|++.++|+.++.+++.+|++||++||+.+|+||+|++++++++++.+||++||++++||+|||||||++
T Consensus 317 kvvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvak 396 (486)
T COG0380 317 KVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAK 396 (486)
T ss_pred ceEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeeccccccccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCCCceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhh
Q 002955 450 EYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYV 529 (863)
Q Consensus 450 Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v 529 (863)
||+|||.+ ++|+||+|||+||+.+|.+|++|||||.+++|+||++||+|+++||+.|++++++.|
T Consensus 397 EyVa~q~~---------------~~G~LiLSeFaGaa~~L~~AliVNP~d~~~va~ai~~AL~m~~eEr~~r~~~~~~~v 461 (486)
T COG0380 397 EYVAAQRD---------------KPGVLILSEFAGAASELRDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQV 461 (486)
T ss_pred HHHHhhcC---------------CCCcEEEeccccchhhhccCEeECCCChHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 99999874 479999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHHHHH
Q 002955 530 STHDVAYWARSFLQDLERA 548 (863)
Q Consensus 530 ~~~~~~~W~~~~l~~l~~~ 548 (863)
.+||+++|+++|+.+|.+.
T Consensus 462 ~~~d~~~W~~~fl~~la~~ 480 (486)
T COG0380 462 LTHDVARWANSFLDDLAQA 480 (486)
T ss_pred HhhhHHHHHHHHHHHHHhc
Confidence 9999999999999999873
No 10
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=100.00 E-value=1.1e-107 Score=935.25 Aligned_cols=454 Identities=40% Similarity=0.716 Sum_probs=423.6
Q ss_pred cEEEEEcCCccceeeCCCCCCCeEEEeCCCchHHHhhhcccCCCceEEEeccCccccc-hhhhhHHHhhccCceEEEeeC
Q 002955 60 RMIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDL-SEQDEVSQTLLETFKCVPAFI 138 (863)
Q Consensus 60 r~iivsnrlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~-~~~~~~~~~~~~~~~~~pv~l 138 (863)
|+||||||+|+.+.++ + ++++.|||+++|.+.+. ..+++||||+|...++ +++.++...+..+|+|+||||
T Consensus 1 ~livvsnr~p~~~~~~----~---~~~~~gGl~~al~~~~~-~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~v~l 72 (456)
T TIGR02400 1 RLIVVSNRLPVPITRG----G---LEPSAGGLAVALLGALK-ATGGVWFGWSGKTVEEDEGEPFLRTELEGKITLAPVFL 72 (456)
T ss_pred CEEEEECCCCccccCC----C---CCcCCCCHHHHHHHHHh-ccCcEEEEeCCCCCCccchhhhHHHhhccCceEEEEEC
Confidence 7999999999987654 2 56678999999988665 4799999999976553 333445555678899999999
Q ss_pred ChHhHhhHhhhccccccccccccCCCCCCCCCCccChhhHHHHHHHHHHHHHHHHhhcCCCCCEEEEeCcccchHHHHHH
Q 002955 139 PPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLR 218 (863)
Q Consensus 139 ~~~~~~~~y~gf~~~~lWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~p~~D~VwvhDyhl~llp~~lr 218 (863)
++++++.||+||||++|||+|||+.+. .+|+++.|++|++||++||++|++.++| +|+|||||||||+||.+||
T Consensus 73 ~~~~~~~~y~gf~n~~lWPl~H~~~~~-----~~~~~~~w~~Y~~vN~~fA~~i~~~~~~-~d~vwvhDYhl~l~p~~lr 146 (456)
T TIGR02400 73 SEEDVDGYYNGFSNSTLWPLFHYRPDL-----IRYDRKAWEAYRRVNRLFAEALAPLLQP-GDIVWVHDYHLMLLPAMLR 146 (456)
T ss_pred CHHHHHHHHHHhhhhhcchhhcccccc-----cccCHHHHHHHHHHHHHHHHHHHHhCCC-CCEEEEecchhhHHHHHHH
Confidence 999999999999999999999999654 5899999999999999999999999997 5999999999999999999
Q ss_pred hhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEE
Q 002955 219 KRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTV 298 (863)
Q Consensus 219 ~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~ 298 (863)
++.|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||++++|+++... ++.+.|+.+
T Consensus 147 ~~~~~~~igfFlHipfP~~e~f~~lp~r~~il~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~----~~~~~g~~~ 222 (456)
T TIGR02400 147 ELGVQNKIGFFLHIPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPN----GVESGGRTV 222 (456)
T ss_pred hhCCCCeEEEEEeCCCCChHHHhhCCcHHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCC----ceEECCcEE
Confidence 9999999999999999999999999999999999999999999999999999999999999976543 467889999
Q ss_pred EEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEec
Q 002955 299 SIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIAN 378 (863)
Q Consensus 299 ~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~ 378 (863)
+|.++|+|||++.|.+....+.+.+..++++++++++++|++|||+|+.||+..+|+||++|++++|+++++++|+||+.
T Consensus 223 ~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~ 302 (456)
T TIGR02400 223 RVGAFPIGIDVDRFAEQAKKPSVQKRIAELRESLKGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAV 302 (456)
T ss_pred EEEEecCcCCHHHHHHHhcChhHHHHHHHHHHHcCCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEec
Confidence 99999999999999988877888888888999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCC
Q 002955 379 PARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGN 458 (863)
Q Consensus 379 p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~ 458 (863)
|+|+++++|+++++++++++++||++||..+|.||+++.+.++.+|+.++|++|||||+||++||||||++|||||+.+
T Consensus 303 p~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P- 381 (456)
T TIGR02400 303 PSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDP- 381 (456)
T ss_pred CCccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred cccccccCCCCCCCCCccEEecccccCcccCCCceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHH
Q 002955 459 EKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWA 538 (863)
Q Consensus 459 ~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~ 538 (863)
+.|+||+|+++|+++.+.+|++|||||++++|+||.++|+|+.+||+.|++++++++.+||+.+|+
T Consensus 382 --------------~~g~vVlS~~~G~~~~l~~gllVnP~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~ 447 (456)
T TIGR02400 382 --------------KDGVLILSEFAGAAQELNGALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRWR 447 (456)
T ss_pred --------------CCceEEEeCCCCChHHhCCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHH
Confidence 358999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH
Q 002955 539 RSFLQDLE 546 (863)
Q Consensus 539 ~~~l~~l~ 546 (863)
++|+.+|.
T Consensus 448 ~~~l~~l~ 455 (456)
T TIGR02400 448 EDFLSDLN 455 (456)
T ss_pred HHHHHHhh
Confidence 99999885
No 11
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=100.00 E-value=4.4e-98 Score=862.31 Aligned_cols=459 Identities=47% Similarity=0.811 Sum_probs=428.9
Q ss_pred cEEEEEcCCccceeeCCCCCCCeEEEeCCCchHHHhhhcccCCCceEEEeccCccccchhhhhHHHhhccCceEEEeeCC
Q 002955 60 RMIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSEQDEVSQTLLETFKCVPAFIP 139 (863)
Q Consensus 60 r~iivsnrlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~ 139 (863)
|+||||||+|+.++++++ |.|.++++.|||+.+|.+.+. ..+++||||++.+.+..+++.+.+...++|+|+|||++
T Consensus 1 ~li~vsnr~p~~~~~~~~--~~~~~~~~~ggl~~~l~~~~~-~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 77 (460)
T cd03788 1 RLVVVSNRLPVSIERDGD--GEFEARRSAGGLATALKGLLK-RTGGLWVGWSGIEEDEEEEDEVSTELLGEYTVAPVFLS 77 (460)
T ss_pred CEEEEECCCCceeEEcCC--CceEeccCCCcHHHHHHHHHh-cCCeEEEEeCCCCCCcccchhhhhhhcCCceEEEeeCC
Confidence 689999999999999876 589999999999999987554 57999999999877654444455566789999999999
Q ss_pred hHhHhhHhhhccccccccccccCCCCCCCCCCccChhhHHHHHHHHHHHHHHHHhhcCCCCCEEEEeCcccchHHHHHHh
Q 002955 140 PELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRK 219 (863)
Q Consensus 140 ~~~~~~~y~gf~~~~lWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~p~~D~VwvhDyhl~llp~~lr~ 219 (863)
+++++.||+||||++|||+|||+.+. .+|++++|++|++||++||++|++.++| +|+||||||||+++|.+||+
T Consensus 78 ~~~~~~~y~~f~~~~LWp~~H~~~~~-----~~~~~~~w~~Y~~vN~~fa~~i~~~~~~-~d~iwihDyhl~llp~~lr~ 151 (460)
T cd03788 78 PEEFEGYYNGFSNEVLWPLFHYRLDL-----ARFDREDWEAYVRVNRKFADAIAEVLRP-GDLVWVHDYHLLLLPQMLRE 151 (460)
T ss_pred HHHHHHHHHHhhhhhcchhhcCCCCc-----cccCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeChhhhHHHHHHHh
Confidence 99999999999999999999999876 5899999999999999999999999997 59999999999999999999
Q ss_pred hCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEE
Q 002955 220 RFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVS 299 (863)
Q Consensus 220 ~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~ 299 (863)
+.|+++||||||||||++|+|+++|+|++|+++||+||+|||||++|++||+++|+++++++..... .+.++|+.++
T Consensus 152 ~~~~~~i~~f~HipfP~~e~~~~lp~~~~ll~~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~~---~i~~~g~~~~ 228 (460)
T cd03788 152 RGPDARIGFFLHIPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDDG---GVEYGGRRVR 228 (460)
T ss_pred hCCCCeEEEEEeCCCCChHHHhhCCChHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHcCCcccCCc---eEEECCEEEE
Confidence 9999999999999999999999999999999999999999999999999999999999998865532 6889999999
Q ss_pred EEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecC
Q 002955 300 IKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANP 379 (863)
Q Consensus 300 i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p 379 (863)
|.++|+|||++.|......+....+.++++..++++++|++|||+++.||+..+|+||+++++++|+++++++|+|||.|
T Consensus 229 i~vip~GID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~ 308 (460)
T cd03788 229 VGAFPIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVP 308 (460)
T ss_pred EEEEeCeEcHHHHHHHhcCchhHHHHHHHHHhcCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccC
Confidence 99999999999999877666666666777777789999999999999999999999999999999999999999999999
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCc
Q 002955 380 ARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNE 459 (863)
Q Consensus 380 ~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~ 459 (863)
+|+++++++++++++.+++++||.+||..+|.||+++.+.++.+++.++|++|||||+||++||||||++|||||+.+
T Consensus 309 ~~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p-- 386 (460)
T cd03788 309 SRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDD-- 386 (460)
T ss_pred CCcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred ccccccCCCCCCCCCccEEecccccCcccCCCceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHH
Q 002955 460 KLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWAR 539 (863)
Q Consensus 460 ~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~ 539 (863)
++|++|+|+++|+++.+.+|++|||+|++++|++|.++|+|+++|++.+++++++++.++|+..|++
T Consensus 387 -------------~~g~vV~S~~~G~~~~~~~g~lv~p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~~~~w~~ 453 (460)
T cd03788 387 -------------DPGVLILSEFAGAAEELSGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWAN 453 (460)
T ss_pred -------------CCceEEEeccccchhhcCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 4799999999999999888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH
Q 002955 540 SFLQDL 545 (863)
Q Consensus 540 ~~l~~l 545 (863)
+|+++|
T Consensus 454 ~~l~~l 459 (460)
T cd03788 454 SFLDDL 459 (460)
T ss_pred HHHHhh
Confidence 999987
No 12
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=100.00 E-value=3.6e-34 Score=345.04 Aligned_cols=542 Identities=13% Similarity=0.114 Sum_probs=324.5
Q ss_pred CEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhh-----------------cCCChHHH-HHHHHhCCEeccc
Q 002955 201 DFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYR-----------------TLPIRDEL-LRALLNADLIGFH 262 (863)
Q Consensus 201 D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r-----------------~lp~r~ei-l~~ll~~dligF~ 262 (863)
|+|+-|+++--.+...|++++ ++|..++.|.- ..+-++ .++.|-++ -..+-.||.|--.
T Consensus 312 DvIHaHyw~sG~aa~~L~~~l-gVP~V~T~HSL--gr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIas 388 (1050)
T TIGR02468 312 YVIHGHYADAGDSAALLSGAL-NVPMVLTGHSL--GRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITS 388 (1050)
T ss_pred CEEEECcchHHHHHHHHHHhh-CCCEEEECccc--hhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEe
Confidence 999999999888888888877 68999999963 111111 11222221 1346678998877
Q ss_pred CHHHHHHHHHHHH-------hhhCceecccCceeeEEEcCe-EEEEEEeccccCchHHHhhcCCchH-------------
Q 002955 263 TFDYARHFLSCCS-------RMLGVSYQSKRGYIGLEYFGR-TVSIKILPVGIHIGQLQSVLNLPET------------- 321 (863)
Q Consensus 263 t~~~~~~Fl~~~~-------r~lg~~~~~~~~~~~~~~~gr-~~~i~v~p~GId~~~~~~~~~~~~~------------- 321 (863)
|..-...-...-. |.|.. ...+ ++..+|+ .-++.|+|+|||+++|.+.......
T Consensus 389 T~qE~~eq~~lY~~~~~~~~~~~~~--~~~~---gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~ 463 (1050)
T TIGR02468 389 TRQEIEEQWGLYDGFDVILERKLRA--RARR---GVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPD 463 (1050)
T ss_pred CHHHHHHHHHHhccCCchhhhhhhh--hhcc---cccccccCCCCeEEeCCCCcHHHccCCCccccchhccccccccccc
Confidence 7766553222100 11100 0111 2333343 2388899999999999753211100
Q ss_pred HHHHHHHHHHh--CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhH----HHHHHHHH
Q 002955 322 EAKVAELQDQF--KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDV----QEVQSETH 395 (863)
Q Consensus 322 ~~~~~~l~~~~--~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~----~~~~~~v~ 395 (863)
.....+++..+ +++++||+|+|+++.||+..+|+||.++.+..+.. ++++ .+|... ..... .....++.
T Consensus 464 ~~~~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~--nL~L-IiG~gd--d~d~l~~~~~~~l~~L~ 538 (1050)
T TIGR02468 464 PPIWSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGNRD--DIDEMSSGSSSVLTSVL 538 (1050)
T ss_pred chhhHHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCC--CEEE-EEecCc--hhhhhhccchHHHHHHH
Confidence 01122344333 67889999999999999999999999987543321 2333 345321 11110 12234455
Q ss_pred HHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhc----cceeecccccCCCccceeeeeeecCCcccccccCCCCCC
Q 002955 396 ATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIA----ECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPST 471 (863)
Q Consensus 396 ~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~A----Dv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~ 471 (863)
+++++. + ....+.|.|+++.+++.++|+.| ||||+||.+|||||+++|||||
T Consensus 539 ~li~~l----g---L~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAc----------------- 594 (1050)
T TIGR02468 539 KLIDKY----D---LYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAH----------------- 594 (1050)
T ss_pred HHHHHh----C---CCCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHh-----------------
Confidence 555544 2 23345677899999999999998 6999999999999999999999
Q ss_pred CCCccEEecccccCcccCC---CceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHH
Q 002955 472 AKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLERA 548 (863)
Q Consensus 472 ~~~g~lVlSe~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 548 (863)
+.|+|+|..+|+.+.+. +|++|+|.|++++|++|.++|+.+ +.++...++.++.+..+++...++.+++.+...
T Consensus 595 --GlPVVASdvGG~~EII~~g~nGlLVdP~D~eaLA~AL~~LL~Dp-elr~~m~~~gr~~v~~FSWe~ia~~yl~~i~~~ 671 (1050)
T TIGR02468 595 --GLPMVATKNGGPVDIHRVLDNGLLVDPHDQQAIADALLKLVADK-QLWAECRQNGLKNIHLFSWPEHCKTYLSRIASC 671 (1050)
T ss_pred --CCCEEEeCCCCcHHHhccCCcEEEECCCCHHHHHHHHHHHhhCH-HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
Confidence 56799999999888773 599999999999999999999754 444445555677788899999999999888876
Q ss_pred HHhhcc-cccc-----c-----cC--------cCcceeEeecCccccc----------CC----HHHHHHHHHh------
Q 002955 549 CRDHMR-RRCW-----G-----IG--------FGLGFRVVALDPNFRK----------LS----IDHIVSAYKR------ 589 (863)
Q Consensus 549 ~~~~~~-~~~~-----~-----~g--------~g~~~~~~~~~~~f~~----------l~----~~~i~~~y~~------ 589 (863)
...+.. ++.. . .+ ++|++.+ |-.... ++ ...+..+-++
T Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 748 (1050)
T TIGR02468 672 RPRHPQWQRDTDDGEEASEDESPGDSLRDIQDISLNLSV---DGDKESNNGSSNVEGSGPPADRVAKIENAVRSWSKSPK 748 (1050)
T ss_pred hccCcccccccccccccccccCccccccccccchhhccc---cccccccccccccccccchhhHHHHHHHHHhhcccccc
Confidence 544311 0000 0 01 0111110 000000 01 0111111111
Q ss_pred -------------------cccceeE--ecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhh
Q 002955 590 -------------------TKNRAIL--LDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFS 648 (863)
Q Consensus 590 -------------------s~~rlI~--~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~ 648 (863)
...++|+ +|+|+| .. ....-.++++++++-.....+.|+++|||+...+...+.
T Consensus 749 ~~~~~~~~~~~~~~~~~~~~~~~~~via~D~d~~-~~----~~~~l~~~~~~~~~~~~~~~igfv~aTGR~l~~~~~~l~ 823 (1050)
T TIGR02468 749 GSSAKAQQGSGAGKYPALRRRKRLFVIAVDCYDD-KD----LLQIIKNIFEAVRKERMEGSSGFILSTSMTISEIQSFLK 823 (1050)
T ss_pred ccccccccccccccCccccccceEEEEEeccCCC-CC----hHHHHHHHHHHHhccccCCceEEEEEcCCCHHHHHHHHH
Confidence 1135666 899999 32 111122333333321123458899999999999999886
Q ss_pred cc--C---CceEEccCcEEEEeCCc-----eeEEee---cCCCCccHH-HHHHHHHHHHhhc--------CCCceeeecc
Q 002955 649 SC--E---GLGIAAEHGYFVRPNYG-----VDWETC---VSVPDFSWK-QIAEPVMKLYTET--------TDGSTIETKE 706 (863)
Q Consensus 649 ~l--~---~l~liaenGa~I~~~~~-----~~w~~~---~~~~~~~w~-~~v~~i~~~y~~~--------~~gs~ie~k~ 706 (863)
.. + ...+||.-|..|+++.. ..|..- ....+..|. +.++..+..+... .++...+..+
T Consensus 824 ~~~lp~~~PD~lI~~vGTeIyy~~~~~~~~~~~~~D~~w~~hI~~rW~ge~~r~~L~~l~~~~~~~~~~~~~~l~~Q~~~ 903 (1050)
T TIGR02468 824 SGGLNPTDFDALICNSGSELYYPSLNGSEEGKLVADQDYHSHIEYRWGGEGLRKTLVKWAASINEKKGENEEQIVEEDEE 903 (1050)
T ss_pred hCCCCCCCCCEEEeCCCcceeccCcCCCCCCCceECHHHHHHHHccCCcHHHHHHHHHHhhhcccccccccccceecChh
Confidence 53 3 34579999999988621 112110 001123452 2233333333321 1223333333
Q ss_pred ce--eEeecccCCCCcchhhHHHHHHHHHHHhcCCCe-EEEE-CCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEE
Q 002955 707 SA--LVWNFQYADPDFGSCQAKELLDHLESVLANEPV-SVKS-GPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLC 782 (863)
Q Consensus 707 ~~--l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~~-~v~~-g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vla 782 (863)
.+ ....|.-.|++.. ...+++.+.|+.. .... .+++ +..+++|.|..+|||.|+++|+.++ |++.+++++
T Consensus 904 ~q~~~k~SY~v~d~~~~-~~v~elr~~Lr~~--gLr~~~iys~~~~~LDVlP~~ASKgqAlRyL~~rw---gi~l~~v~V 977 (1050)
T TIGR02468 904 SSTDHCYAFKVKDPSKV-PPVKELRKLLRIQ--GLRCHAVYCRNGTRLNVIPLLASRSQALRYLFVRW---GIELANMAV 977 (1050)
T ss_pred hCCCceEEEEecCcccC-ccHHHHHHHHHhC--CCceEEEeecCCcEeeeeeCCCCHHHHHHHHHHHc---CCChHHeEE
Confidence 22 2222321233221 2234444444432 1122 2233 4589999999999999999999999 999999955
Q ss_pred -EeCCcc-h-HHHHHHh
Q 002955 783 -IGDDRS-D-EDMFEVI 796 (863)
Q Consensus 783 -iGD~~N-D-~~Mf~~a 796 (863)
+||+.| | ++|+.-.
T Consensus 978 faGdSGntD~e~Ll~G~ 994 (1050)
T TIGR02468 978 FVGESGDTDYEGLLGGL 994 (1050)
T ss_pred EeccCCCCCHHHHhCCc
Confidence 999999 9 5565433
No 13
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.2e-32 Score=287.36 Aligned_cols=249 Identities=31% Similarity=0.508 Sum_probs=214.7
Q ss_pred CHHHHHHHHHhcccceeEecCCccccCCC--CCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEE
Q 002955 579 SIDHIVSAYKRTKNRAILLDYDGTIMVPG--SISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIA 656 (863)
Q Consensus 579 ~~~~i~~~y~~s~~rlI~~DlDGTLl~~~--~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~li 656 (863)
....+.+.|..+++++|++||||||++.. +....++++++++|++|+.++++.|+|+|||+...++.|++ +++++++
T Consensus 5 ~~~~~~~~~~~a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~-v~~i~l~ 83 (266)
T COG1877 5 QSNQLLEPYLNARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFG-VPGIGLI 83 (266)
T ss_pred hhhhhccccccccceEEEEeccccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcC-CCCccEE
Confidence 34556677899999999999999999854 34567899999999999999999999999999999999998 7899999
Q ss_pred ccCcEEEEeCCceeEEeecCCCCccHHHHHHHHHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHh
Q 002955 657 AEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVL 736 (863)
Q Consensus 657 aenGa~I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l 736 (863)
|+||++++...+..|+......+..|++.+..+++.|.+++||+++|.|..++.|||++++++....++.......
T Consensus 84 aehGa~~r~~~g~~~~~~~~~~~~~~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~---- 159 (266)
T COG1877 84 AEHGAEVRDPNGKWWINLAEEADLRWLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATL---- 159 (266)
T ss_pred EecceEEecCCCCeeEecCHHHHhhHHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhc----
Confidence 9999999888888888877777778999999999999999999999999999999999997765443333222222
Q ss_pred cCCC-eEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEE
Q 002955 737 ANEP-VSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACT 815 (863)
Q Consensus 737 ~~~~-~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~ 815 (863)
.+.. +.+..|+..||++|.++|||.++++++++. ....++++|.|||.+|++||++++.+- .+++.
T Consensus 160 ~~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~~---~~~~~~~~~aGDD~TDE~~F~~v~~~~----------~~~v~ 226 (266)
T COG1877 160 INELKLRVTPGKMVVELRPPGVSKGAAIKYIMDEL---PFDGRFPIFAGDDLTDEDAFAAVNKLD----------SITVK 226 (266)
T ss_pred cccccEEEEeCceEEEEeeCCcchHHHHHHHHhcC---CCCCCcceecCCCCccHHHHHhhccCC----------CceEE
Confidence 1223 889999999999999999999999999987 555578999999999999999998742 26899
Q ss_pred eCCCccccceecCCHhHHHHHHHHHHHhhc
Q 002955 816 VGQKPSKAKYYLDDTAEILRMLLGLAEASA 845 (863)
Q Consensus 816 vG~~~s~A~y~l~d~~eV~~~L~~L~~~~~ 845 (863)
+|...+.|++.+.........|.++.....
T Consensus 227 v~~~~t~a~~~~~~~~~~~~~l~~~~~~~~ 256 (266)
T COG1877 227 VGVGSTQAKFRLAGVYGFLRSLYKLLEALG 256 (266)
T ss_pred ecCCcccccccccccHHHHHHHHHHHHHhh
Confidence 999999999999999999999999888765
No 14
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=100.00 E-value=1.9e-33 Score=297.07 Aligned_cols=227 Identities=39% Similarity=0.673 Sum_probs=154.1
Q ss_pred EecCCccccCCCC--CCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcEEEEeCCceeEEe
Q 002955 596 LLDYDGTIMVPGS--ISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWET 673 (863)
Q Consensus 596 ~~DlDGTLl~~~~--~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa~I~~~~~~~w~~ 673 (863)
|+||||||.+..+ ....+++++.++|++||+++++.|+|+|||+...+ +.+..+++++++++||++++.++...|..
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~-~~~~~~~~i~l~gehG~e~~~~~~~~~~~ 79 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRALAADPNNTVAIVSGRSLDDL-ERFGGIPNIGLAGEHGAEIRRPGGSEWTN 79 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHHHHHHSE--EEEE-SS-HHHH-HHH-S-SS-EEEEGGGTEEEETTE-EEE-
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHh-HHhcCCCCceEEEEeeEEeccCccccccc
Confidence 6999999998542 44578999999999999999999999999999994 44446789999999999999999888887
Q ss_pred ecCCCCccHHHHHHHHHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcCC-CeEEEECCcEEEE
Q 002955 674 CVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANE-PVSVKSGPNIVEV 752 (863)
Q Consensus 674 ~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~-~~~v~~g~~~vEI 752 (863)
.....+..|++.+.++++.|.++++|+++|.|++++.|||+.++++++..++.++.+++.+.+... ++.+..|+.+|||
T Consensus 80 ~~~~~~~~~~~~~~~~l~~~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~g~~~vEv 159 (235)
T PF02358_consen 80 LPADEDLEWKDEVREILEYFAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQLREILASHPGLEVVPGKKVVEV 159 (235)
T ss_dssp TTGGGGHHHHHHHHHHHTTHHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHHHHHHHHH-T-EEEE-SSEEEE
T ss_pred cccccchHHHHHHHHHHHHHHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHHHHHHHhCCCEEEEECCCEEEE
Confidence 555556689999999999999999999999999999999999999998889999999999887765 7999999999999
Q ss_pred ecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeC-----CCccccceec
Q 002955 753 KPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVG-----QKPSKAKYYL 827 (863)
Q Consensus 753 ~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG-----~~~s~A~y~l 827 (863)
+|.+++||.|+++|++.+...+..+++++|+|||.+||+||++++... ..-+++.|| .++|.|+|++
T Consensus 160 rp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~--------~~~~~i~V~~~~~~~~~t~A~y~l 231 (235)
T PF02358_consen 160 RPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELE--------EGGFGIKVGSVSVGEKPTAASYRL 231 (235)
T ss_dssp E-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS------------EEEEES---------------
T ss_pred EeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcc--------cCCCCeEEEeeccccccccccccc
Confidence 999999999999999987322334789999999999999999998641 011455555 4689999999
Q ss_pred CCHh
Q 002955 828 DDTA 831 (863)
Q Consensus 828 ~d~~ 831 (863)
+|+.
T Consensus 232 ~~p~ 235 (235)
T PF02358_consen 232 DDPS 235 (235)
T ss_dssp ----
T ss_pred ccCC
Confidence 9863
No 15
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=100.00 E-value=1e-31 Score=285.27 Aligned_cols=237 Identities=29% Similarity=0.415 Sum_probs=195.4
Q ss_pred cccceeEecCCccccCCC--CCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcEEEEeCC
Q 002955 590 TKNRAILLDYDGTIMVPG--SISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNY 667 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~--~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa~I~~~~ 667 (863)
+++++|+|||||||++.. +....+++++.++|++|++++++.|+|+|||+...+...+ ..++++++++||++++.++
T Consensus 1 ~~~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~~-~~~~~~l~g~hG~~~~~~g 79 (244)
T TIGR00685 1 ARKRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGV-KLPGLGLAGEHGCEMKDNG 79 (244)
T ss_pred CCcEEEEEecCccccCCcCCCcccCCCHHHHHHHHHHHhCCCCeEEEEECCChhhccccC-CCCceeEEeecCEEEecCC
Confidence 467899999999999843 3445688999999999999999999999999988877655 3467999999999998744
Q ss_pred ce-eEEeecCCCCccHHHHHHHHHHHHhhcCCCceeeeccceeEeecccC-CCCcchhhHHHHHHHHHHHhcCCCeEEEE
Q 002955 668 GV-DWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYA-DPDFGSCQAKELLDHLESVLANEPVSVKS 745 (863)
Q Consensus 668 ~~-~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~-d~~~~~~~a~el~~~L~~~l~~~~~~v~~ 745 (863)
.. .|... ......|++.+.++++.|.++ +|+++|.|+.++.|||+.+ +++.+..++.++..++. ...++.+..
T Consensus 80 ~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~-pG~~iE~K~~s~~~hyr~a~d~~~~~~~~~~~~~~~~---~~~~~~v~~ 154 (244)
T TIGR00685 80 SCQDWVNL-TEKIPSWKVRANELREEITTR-PGVFIERKGVALAWHYRQAPVPELARFRAKELKEKIL---SFTDLEVMD 154 (244)
T ss_pred Ccceeeec-hhhhhhHHHHHHHHHHHHhcC-CCcEEEecceEEEEEeccCCCcHHHHHHHHHHHHHHh---cCCCEEEEE
Confidence 33 45543 222246888888998888887 9999999999999999998 77777667766666553 334688899
Q ss_pred CCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEe--CCCcccc
Q 002955 746 GPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTV--GQKPSKA 823 (863)
Q Consensus 746 g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~v--G~~~s~A 823 (863)
++.++|++|.++|||.+++++++++ ++.++++++|||+.||++||+.+.... .....+++.| |.+++.|
T Consensus 155 g~~~~e~~p~~~~Kg~a~~~~~~~~---~~~~~~~i~iGD~~~D~~~~~~~~~~~------~~~g~~~v~v~~g~~~~~A 225 (244)
T TIGR00685 155 GKAVVELKPRFVNKGEIVKRLLWHQ---PGSGISPVYLGDDITDEDAFRVVNNQW------GNYGFYPVPIGSGSKKTVA 225 (244)
T ss_pred CCeEEEEeeCCCCHHHHHHHHHHhc---ccCCCceEEEcCCCcHHHHHHHHhccc------CCCCeEEEEEecCCcCCCc
Confidence 9999999999999999999999998 888899999999999999999993210 0112367888 8889999
Q ss_pred ceecCCHhHHHHHHHHHH
Q 002955 824 KYYLDDTAEILRMLLGLA 841 (863)
Q Consensus 824 ~y~l~d~~eV~~~L~~L~ 841 (863)
+|+++++++|.++|+.|+
T Consensus 226 ~~~~~~~~~v~~~L~~l~ 243 (244)
T TIGR00685 226 KFHLTGPQQVLEFLGLLV 243 (244)
T ss_pred eEeCCCHHHHHHHHHHHh
Confidence 999999999999999886
No 16
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=100.00 E-value=3.5e-31 Score=284.06 Aligned_cols=234 Identities=20% Similarity=0.237 Sum_probs=187.1
Q ss_pred cceeEecCCccccCCC--CCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcEEEEeCCce
Q 002955 592 NRAILLDYDGTIMVPG--SISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGV 669 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~--~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa~I~~~~~~ 669 (863)
.++|++||||||++.. +....++++++++|++|++++|+.|+|+|||+...+.++++.+ .+.++++||++++..++.
T Consensus 14 ~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~-~~~~i~~nGa~i~~~~~~ 92 (266)
T PRK10187 14 NYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPY-RFPLAGVHGAERRDINGK 92 (266)
T ss_pred CEEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcc-cceEEEeCCCeeecCCCC
Confidence 4799999999999842 2356889999999999966689999999999999999999765 467999999999876554
Q ss_pred eEEeecCCCCccHHHHHHHHHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcCCCeEEEECCcE
Q 002955 670 DWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNI 749 (863)
Q Consensus 670 ~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~ 749 (863)
.+... .+.++.+.+...++.+.++++|+++|.|+..+.+||+.++ +. .....++.+.+.+.+. .+.+.+|+.+
T Consensus 93 ~~~~~---l~~~~~~~i~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~-~~-~~~~~~l~~~i~~~~~--~~~~~~g~~~ 165 (266)
T PRK10187 93 THIVH---LPDAIARDISVQLHTALAQLPGAELEAKGMAFALHYRQAP-QH-EDALLALAQRITQIWP--QLALQPGKCV 165 (266)
T ss_pred eeecc---CChhHHHHHHHHHHHHhccCCCcEEEeCCcEEEEECCCCC-cc-HHHHHHHHHHHHhhCC--ceEEeCCCEE
Confidence 33222 2334555555556667788899999999999999998763 21 1112222233322222 3677789999
Q ss_pred EEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCCccccceecCC
Q 002955 750 VEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDD 829 (863)
Q Consensus 750 vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~A~y~l~d 829 (863)
+||+|+++|||.|++++++++ |+..+++++|||+.||++||+.+... ..++|+||++.+.|+|++++
T Consensus 166 lEi~p~g~~Kg~al~~ll~~~---~~~~~~v~~~GD~~nD~~mf~~~~~~----------~g~~vavg~a~~~A~~~l~~ 232 (266)
T PRK10187 166 VEIKPRGTNKGEAIAAFMQEA---PFAGRTPVFVGDDLTDEAGFAVVNRL----------GGISVKVGTGATQASWRLAG 232 (266)
T ss_pred EEeeCCCCCHHHHHHHHHHhc---CCCCCeEEEEcCCccHHHHHHHHHhc----------CCeEEEECCCCCcCeEeCCC
Confidence 999999999999999999999 99999999999999999999999532 12689999999999999999
Q ss_pred HhHHHHHHHHHHHhhcC
Q 002955 830 TAEILRMLLGLAEASAQ 846 (863)
Q Consensus 830 ~~eV~~~L~~L~~~~~~ 846 (863)
+++|..+|+.|+...+.
T Consensus 233 ~~~v~~~L~~l~~~~~~ 249 (266)
T PRK10187 233 VPDVWSWLEMITTAQQQ 249 (266)
T ss_pred HHHHHHHHHHHHHhhhc
Confidence 99999999999987774
No 17
>PLN03017 trehalose-phosphatase
Probab=99.98 E-value=5.9e-31 Score=287.04 Aligned_cols=249 Identities=25% Similarity=0.347 Sum_probs=196.4
Q ss_pred HHHHHHHHhcccceeEecCCccccCCCC-CC-CCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEcc
Q 002955 581 DHIVSAYKRTKNRAILLDYDGTIMVPGS-IS-TSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAE 658 (863)
Q Consensus 581 ~~i~~~y~~s~~rlI~~DlDGTLl~~~~-~~-~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liae 658 (863)
+.++.. .+.+..+||+||||||++..+ .+ ..+++++.++|++|+ +++.|+|+|||+...+.+++. +..++++++
T Consensus 101 ~~~~~~-~~~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La--~~~~vaIvSGR~~~~l~~~~~-l~~l~l~g~ 176 (366)
T PLN03017 101 EQIMEA-SRGKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLA--KCFPTAIVTGRCIDKVYNFVK-LAELYYAGS 176 (366)
T ss_pred HHHHHH-hcCCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHh--cCCcEEEEeCCCHHHHHHhhc-ccCceEEEc
Confidence 444443 355678999999999996442 23 379999999999995 578999999999999999964 467899999
Q ss_pred CcEEEEeCCceeEEe------ecCCCCccHHHHHHHH---HHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHH
Q 002955 659 HGYFVRPNYGVDWET------CVSVPDFSWKQIAEPV---MKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELL 729 (863)
Q Consensus 659 nGa~I~~~~~~~w~~------~~~~~~~~w~~~v~~i---~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~ 729 (863)
||+.++.+++..+.. ........|...+.++ +..++++++|+++|+|.+++.||||++++. .+.++.
T Consensus 177 hGa~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~~----~~~~l~ 252 (366)
T PLN03017 177 HGMDIKGPAKGFSRHKRVKQSLLYQPANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEK----KWSELV 252 (366)
T ss_pred CCcEEecCCCcceeccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCCHH----HHHHHH
Confidence 999998765432110 1112223466666665 556777899999999999999999998664 346677
Q ss_pred HHHHHHhcCCC-eEEEECCcEEEEecC-CCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCC
Q 002955 730 DHLESVLANEP-VSVKSGPNIVEVKPQ-GVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSP 807 (863)
Q Consensus 730 ~~L~~~l~~~~-~~v~~g~~~vEI~p~-gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~ 807 (863)
.++...+.+.+ +.+..|+..+||+|. ++|||.|+++|++.+...+...++++|||||.+||+||+.+....
T Consensus 253 ~~~~~vl~~~~~l~v~~GkkVlEvRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~------- 325 (366)
T PLN03017 253 LQVRSVLKNFPTLKLTQGRKVFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRG------- 325 (366)
T ss_pred HHHHHHHHhCCCcEEeCCCeEEEecCCCCCCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcC-------
Confidence 77888787766 789999999999995 999999999999988222222568999999999999999996421
Q ss_pred CcceEEEEeC--CCccccceecCCHhHHHHHHHHHHHhhcC
Q 002955 808 VAEVFACTVG--QKPSKAKYYLDDTAEILRMLLGLAEASAQ 846 (863)
Q Consensus 808 ~~~~~av~vG--~~~s~A~y~l~d~~eV~~~L~~L~~~~~~ 846 (863)
..++|.|| .+++.|+|+++++++|.++|+.|+.....
T Consensus 326 --~G~gI~VG~~~k~T~A~y~L~dp~eV~~fL~~L~~~~~~ 364 (366)
T PLN03017 326 --EGFGILVSKFPKDTDASYSLQDPSEVMDFLARLVEWKQM 364 (366)
T ss_pred --CceEEEECCCCCCCcceEeCCCHHHHHHHHHHHHHHHhh
Confidence 23899999 57899999999999999999999987654
No 18
>PLN02151 trehalose-phosphatase
Probab=99.98 E-value=1e-30 Score=284.54 Aligned_cols=243 Identities=23% Similarity=0.374 Sum_probs=194.8
Q ss_pred HhcccceeEecCCccccCCC--CCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcEEEEe
Q 002955 588 KRTKNRAILLDYDGTIMVPG--SISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRP 665 (863)
Q Consensus 588 ~~s~~rlI~~DlDGTLl~~~--~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa~I~~ 665 (863)
.+.+..+||+||||||++.. +....++++++++|++|++ +..|+|+|||+...+.++++ ++.++++++||+.++.
T Consensus 94 ~~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La~--~~~vaIvSGR~~~~l~~~~~-~~~l~laGsHG~e~~~ 170 (354)
T PLN02151 94 SEGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLAK--CFPTAIVSGRCREKVSSFVK-LTELYYAGSHGMDIKG 170 (354)
T ss_pred hcCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHhc--CCCEEEEECCCHHHHHHHcC-CccceEEEeCCceeec
Confidence 45567899999999999743 2445789999999999974 56999999999999999996 4679999999999987
Q ss_pred CC-ceeEEe----ecCCCCccHHHHHHHHHHHH---hhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhc
Q 002955 666 NY-GVDWET----CVSVPDFSWKQIAEPVMKLY---TETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLA 737 (863)
Q Consensus 666 ~~-~~~w~~----~~~~~~~~w~~~v~~i~~~y---~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~ 737 (863)
++ +..|+. ........|...+.++++.+ ++++||+++|.|.+++.||||.++++ +..++.+++.+.+.
T Consensus 171 p~~g~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~pG~~VE~K~~slavHYR~a~~~----~~~~l~~~l~~v~~ 246 (354)
T PLN02151 171 PEQGSKYKKENQSLLCQPATEFLPVINEVYKKLVEKTKSIPGAKVENNKFCASVHFRCVEEN----KWSDLANQVRSVLK 246 (354)
T ss_pred CCCCccccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEeCCCChH----HHHHHHHHHHHHHh
Confidence 63 345542 11123446887777776655 46789999999999999999998654 33566777887777
Q ss_pred CCC-eEEEECCcEEEEecC-CCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEE
Q 002955 738 NEP-VSVKSGPNIVEVKPQ-GVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACT 815 (863)
Q Consensus 738 ~~~-~~v~~g~~~vEI~p~-gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~ 815 (863)
+.+ +.+..|+..+||+|. ++|||.|+++|++.+...+...++++|||||.+||+||+.+.... ..+++.
T Consensus 247 ~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~---------~G~gI~ 317 (354)
T PLN02151 247 NYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKK---------QGLGIL 317 (354)
T ss_pred hCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcC---------CCccEE
Confidence 766 789999999999995 999999999999987222233468999999999999999986421 115677
Q ss_pred eC--CCccccceecCCHhHHHHHHHHHHHhhcC
Q 002955 816 VG--QKPSKAKYYLDDTAEILRMLLGLAEASAQ 846 (863)
Q Consensus 816 vG--~~~s~A~y~l~d~~eV~~~L~~L~~~~~~ 846 (863)
|| .++|.|+|+++++++|.++|+.|+.....
T Consensus 318 Vg~~~k~T~A~y~L~dp~eV~~~L~~L~~~~~~ 350 (354)
T PLN02151 318 VSKYAKETNASYSLQEPDEVMEFLERLVEWKQL 350 (354)
T ss_pred eccCCCCCcceEeCCCHHHHHHHHHHHHHhhhc
Confidence 77 68899999999999999999999976543
No 19
>PLN02580 trehalose-phosphatase
Probab=99.97 E-value=1.3e-30 Score=286.96 Aligned_cols=242 Identities=25% Similarity=0.372 Sum_probs=189.2
Q ss_pred HHHHhcccceeEecCCccccCCC--CCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcEE
Q 002955 585 SAYKRTKNRAILLDYDGTIMVPG--SISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYF 662 (863)
Q Consensus 585 ~~y~~s~~rlI~~DlDGTLl~~~--~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa~ 662 (863)
.+|.+.+.+++|+||||||.+.. +....++++++++|++|+++ ..|+|+|||++..+.++++. ..++++++||++
T Consensus 112 ~~~~~~k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~--~~VAIVSGR~~~~L~~~l~~-~~l~laGsHG~e 188 (384)
T PLN02580 112 ANFAKGKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKY--FPTAIISGRSRDKVYELVGL-TELYYAGSHGMD 188 (384)
T ss_pred HHHhhcCCeEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhC--CCEEEEeCCCHHHHHHHhCC-CCccEEEeCCce
Confidence 36889999999999999999854 35567899999999999776 47999999999999999974 579999999999
Q ss_pred EEeCCc----eeEEeec------------CCCCccHHHHHHHHHHH---HhhcCCCceeeeccceeEeecccCCCCcchh
Q 002955 663 VRPNYG----VDWETCV------------SVPDFSWKQIAEPVMKL---YTETTDGSTIETKESALVWNFQYADPDFGSC 723 (863)
Q Consensus 663 I~~~~~----~~w~~~~------------~~~~~~w~~~v~~i~~~---y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~ 723 (863)
++.+.+ ..|...+ ......|...+.++++. ++++++|+++|.|.+++.||||++++++...
T Consensus 189 ~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~~~~i~~v~~~l~e~~~~~pGs~VE~K~~svavHYR~a~~~~~~~ 268 (384)
T PLN02580 189 IMGPVRESVSNDHPNCIKSTDQQGKEVNLFQPASEFLPMIDEVFRSLVESTKDIKGAKVENHKFCVSVHYRNVDEKNWPL 268 (384)
T ss_pred eecCCCCcccccccccccccccccccccccccchhhhhhHHHHHHHHHHHhccCCCCEEEecCcEEEEEeCCCCchHHHH
Confidence 986422 1222211 11134577666666555 5567799999999999999999997776444
Q ss_pred hHHHHHHHHHHHhcCCC-eEEEECCcEEEEec-CCCCHHHHHHHHHHHHhhcCCCcc-e--EEEEeCCcchHHHHHHhhh
Q 002955 724 QAKELLDHLESVLANEP-VSVKSGPNIVEVKP-QGVNKGLVAQHQLETMHQKGMLPD-F--VLCIGDDRSDEDMFEVIKS 798 (863)
Q Consensus 724 ~a~el~~~L~~~l~~~~-~~v~~g~~~vEI~p-~gvsKG~al~~Ll~~l~~~gi~~d-~--vlaiGD~~ND~~Mf~~ag~ 798 (863)
++.++ ...+.+.+ +.+..|+.++||+| .++|||.|+++|++++ |++.+ + ++|||||.||++||+.+..
T Consensus 269 ~~~~l----~~~l~~~~~l~v~~Gk~vlEVrP~~g~~KG~Av~~Ll~~~---g~~~~d~~~pi~iGDD~TDedmF~~L~~ 341 (384)
T PLN02580 269 VAQCV----HDVLKKYPRLRLTHGRKVLEVRPVIDWNKGKAVEFLLESL---GLSNCDDVLPIYIGDDRTDEDAFKVLRE 341 (384)
T ss_pred HHHHH----HHHHHhCCceEEEeCCeEEEEecCCCCCHHHHHHHHHHhc---CCCcccceeEEEECCCchHHHHHHhhhc
Confidence 44433 34444444 78889999999999 5999999999999998 87654 3 4999999999999999754
Q ss_pred hcCCCCCCCCcceEEEEeC--CCccccceecCCHhHHHHHHHHHHHhhc
Q 002955 799 AAAGPSLSPVAEVFACTVG--QKPSKAKYYLDDTAEILRMLLGLAEASA 845 (863)
Q Consensus 799 ~~~~~~~~~~~~~~av~vG--~~~s~A~y~l~d~~eV~~~L~~L~~~~~ 845 (863)
..+ .++|+|| .+.+.|+|+++++++|.++|+.|+....
T Consensus 342 ~~~---------G~~I~Vgn~~~~t~A~y~L~dp~eV~~~L~~L~~~~~ 381 (384)
T PLN02580 342 GNR---------GYGILVSSVPKESNAFYSLRDPSEVMEFLKSLVTWKK 381 (384)
T ss_pred cCC---------ceEEEEecCCCCccceEEcCCHHHHHHHHHHHHHhhh
Confidence 210 1456665 5789999999999999999999988654
No 20
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.94 E-value=6.3e-26 Score=244.05 Aligned_cols=226 Identities=19% Similarity=0.252 Sum_probs=158.4
Q ss_pred cccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCC-ceEEccCcEEEEeCCc
Q 002955 590 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEG-LGIAAEHGYFVRPNYG 668 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~-l~liaenGa~I~~~~~ 668 (863)
|++|+|++|+||||++ .++.++++++++|+++ +++|+.|+|+|||+...+.+++..+.- ..++++||++|.+.+.
T Consensus 1 ~~~kli~~DlDGTLl~---~~~~i~~~~~~al~~~-~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~ 76 (264)
T COG0561 1 MMIKLLAFDLDGTLLD---SNKTISPETKEALARL-REKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGE 76 (264)
T ss_pred CCeeEEEEcCCCCccC---CCCccCHHHHHHHHHH-HHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCc
Confidence 5689999999999999 6778999999999998 899999999999999999999988743 3699999999999855
Q ss_pred eeEEeecCCCCccHHHHHHHHHHHHhhc--CCCceeeeccce------------eEe-e----cccC---CC------Cc
Q 002955 669 VDWETCVSVPDFSWKQIAEPVMKLYTET--TDGSTIETKESA------------LVW-N----FQYA---DP------DF 720 (863)
Q Consensus 669 ~~w~~~~~~~~~~w~~~v~~i~~~y~~~--~~gs~ie~k~~~------------l~~-~----y~~~---d~------~~ 720 (863)
..+...++ .+.+..+++...+. ....+....... ... + .... +. ..
T Consensus 77 ~i~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (264)
T COG0561 77 LLFQKPLS------REDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDK 150 (264)
T ss_pred EEeeecCC------HHHHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEec
Confidence 55444332 23344444433221 011111100000 000 0 0000 00 00
Q ss_pred chhhHHHHHHHHHHHhcCCCeEEEECCcE-EEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhh
Q 002955 721 GSCQAKELLDHLESVLANEPVSVKSGPNI-VEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 799 (863)
Q Consensus 721 ~~~~a~el~~~L~~~l~~~~~~v~~g~~~-vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 799 (863)
......++...+.+.+......+.++..+ +||+|+|+|||.|+++|++++ |+++++|++|||+.||++||+.+|++
T Consensus 151 ~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~l---gi~~~~v~afGD~~ND~~Ml~~ag~g 227 (264)
T COG0561 151 DHEILEELVEALRKRFPDLGLTVSSSGPISLDITPKGVSKGYALQRLAKLL---GIKLEEVIAFGDSTNDIEMLEVAGLG 227 (264)
T ss_pred ChHhHHHHHHHHhhhccccceEEEEcCCceEEEecCCCchHHHHHHHHHHh---CCCHHHeEEeCCccccHHHHHhcCee
Confidence 01223444455555555445566665554 999999999999999999999 99999999999999999999999975
Q ss_pred cCCCCCCCCcceEEEEeCCC----ccccceec--CCHhHHHHHHHHHHH
Q 002955 800 AAGPSLSPVAEVFACTVGQK----PSKAKYYL--DDTAEILRMLLGLAE 842 (863)
Q Consensus 800 ~~~~~~~~~~~~~av~vG~~----~s~A~y~l--~d~~eV~~~L~~L~~ 842 (863)
|+||+. +..|++++ ++.++|.+.|+++..
T Consensus 228 --------------vam~Na~~~~k~~A~~vt~~n~~~Gv~~~l~~~~~ 262 (264)
T COG0561 228 --------------VAMGNADEELKELADYVTTSNDEDGVAEALEKLLL 262 (264)
T ss_pred --------------eeccCCCHHHHhhCCcccCCccchHHHHHHHHHhc
Confidence 445543 56778664 467899999998753
No 21
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.94 E-value=1e-25 Score=243.11 Aligned_cols=225 Identities=18% Similarity=0.222 Sum_probs=153.4
Q ss_pred cccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCC----ceEEccCcEEEEe
Q 002955 590 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEG----LGIAAEHGYFVRP 665 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~----l~liaenGa~I~~ 665 (863)
|++|+|++|+||||++ .++.++++++++|+++ +++|+.|+|||||+...+.+++..+.- .++|+.||+.|..
T Consensus 1 m~~kli~~DlDGTLl~---~~~~i~~~~~~ai~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~ 76 (270)
T PRK10513 1 MAIKLIAIDMDGTLLL---PDHTISPAVKQAIAAA-RAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQK 76 (270)
T ss_pred CceEEEEEecCCcCcC---CCCccCHHHHHHHHHH-HHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEE
Confidence 4589999999999999 6788999999999998 889999999999999999998877631 3589999999986
Q ss_pred C--CceeEEeecCCCCccHHHHHHHHHHHHhhc--------CCCceeeeccce-----------eEeecc---cCCCC--
Q 002955 666 N--YGVDWETCVSVPDFSWKQIAEPVMKLYTET--------TDGSTIETKESA-----------LVWNFQ---YADPD-- 719 (863)
Q Consensus 666 ~--~~~~w~~~~~~~~~~w~~~v~~i~~~y~~~--------~~gs~ie~k~~~-----------l~~~y~---~~d~~-- 719 (863)
. +...+...++.. .+..+++...+. ..+.+...+... ....+. ..++.
T Consensus 77 ~~~~~~i~~~~l~~~------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (270)
T PRK10513 77 AADGETVAQTALSYD------DYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREVEKMDPNLQ 150 (270)
T ss_pred CCCCCEEEecCCCHH------HHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccchhhccccCC
Confidence 3 334454443322 222222221110 111121111100 000000 00000
Q ss_pred c------c-hhhHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHH
Q 002955 720 F------G-SCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDM 792 (863)
Q Consensus 720 ~------~-~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~M 792 (863)
+ . .....++.+.+.+.+......+.++..++||+|+|+|||.|+++|++++ |++++++++|||+.||++|
T Consensus 151 ~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~---gi~~~~v~afGD~~NDi~M 227 (270)
T PRK10513 151 FPKVMMIDEPEILDAAIARIPAEVKERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHL---GIKPEEVMAIGDQENDIAM 227 (270)
T ss_pred ceEEEEeCCHHHHHHHHHHhHHHhcCcEEEEEecCeeEEEeCCCCChHHHHHHHHHHh---CCCHHHEEEECCchhhHHH
Confidence 0 0 1122233334443333322345667789999999999999999999999 9999999999999999999
Q ss_pred HHHhhhhcCCCCCCCCcceEEEEeCCC----ccccceecC--CHhHHHHHHHHHH
Q 002955 793 FEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLD--DTAEILRMLLGLA 841 (863)
Q Consensus 793 f~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~--d~~eV~~~L~~L~ 841 (863)
|+.+|.+ ++||+. +..|+|++. +.++|.++|+++.
T Consensus 228 l~~ag~~--------------vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~~~~ 268 (270)
T PRK10513 228 IEYAGVG--------------VAMGNAIPSVKEVAQFVTKSNLEDGVAFAIEKYV 268 (270)
T ss_pred HHhCCce--------------EEecCccHHHHHhcCeeccCCCcchHHHHHHHHh
Confidence 9999975 445543 578999874 5788999999874
No 22
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.94 E-value=9.9e-26 Score=243.61 Aligned_cols=224 Identities=16% Similarity=0.206 Sum_probs=152.8
Q ss_pred cceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC-CceEEccCcEEEEe-CCce
Q 002955 592 NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRP-NYGV 669 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~-~l~liaenGa~I~~-~~~~ 669 (863)
+|+|++||||||++ .++.++++++++|++| +++|+.|++||||+...+.+++..+. ...+++.||+.|+. .+..
T Consensus 2 ~kli~~DlDGTLl~---~~~~i~~~~~~ai~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~ 77 (272)
T PRK15126 2 ARLAAFDMDGTLLM---PDHHLGEKTLSTLARL-RERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGEL 77 (272)
T ss_pred ccEEEEeCCCcCcC---CCCcCCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCE
Confidence 79999999999998 6788999999999998 88999999999999999999988763 34689999999986 3333
Q ss_pred eEEeecCCCCccHHHHHHHHHHHHhhc--------CCCceeeeccc---------eeEee---cccCC-CCc-------c
Q 002955 670 DWETCVSVPDFSWKQIAEPVMKLYTET--------TDGSTIETKES---------ALVWN---FQYAD-PDF-------G 721 (863)
Q Consensus 670 ~w~~~~~~~~~~w~~~v~~i~~~y~~~--------~~gs~ie~k~~---------~l~~~---y~~~d-~~~-------~ 721 (863)
.+...++. +.+..+++...+. ..+.+...... ..... +.... ... .
T Consensus 78 l~~~~i~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~ 151 (272)
T PRK15126 78 LHRQDLPA------DVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGD 151 (272)
T ss_pred EEeecCCH------HHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECC
Confidence 44443322 2233333222111 01111110000 00000 00000 000 0
Q ss_pred hhhHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcC
Q 002955 722 SCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAA 801 (863)
Q Consensus 722 ~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~ 801 (863)
.....++...+.+.+......+.++..++||+|+++|||+|+++|++++ |++++++++|||+.||++||+.+|.+
T Consensus 152 ~~~~~~~~~~l~~~~~~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~---gi~~~~v~afGD~~NDi~Ml~~ag~~-- 226 (272)
T PRK15126 152 HDDLTRLQIQLNEALGERAHLCFSATDCLEVLPVGCNKGAALAVLSQHL---GLSLADCMAFGDAMNDREMLGSVGRG-- 226 (272)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEcCCcEEEeecCCCChHHHHHHHHHHh---CCCHHHeEEecCCHHHHHHHHHcCCc--
Confidence 1222344444554444333344566789999999999999999999999 99999999999999999999999985
Q ss_pred CCCCCCCcceEEEEeCCC----ccccce--ec--CCHhHHHHHHHHHHH
Q 002955 802 GPSLSPVAEVFACTVGQK----PSKAKY--YL--DDTAEILRMLLGLAE 842 (863)
Q Consensus 802 ~~~~~~~~~~~av~vG~~----~s~A~y--~l--~d~~eV~~~L~~L~~ 842 (863)
++||+. +..|+| ++ ++.++|.++|+++..
T Consensus 227 ------------vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~~~~~ 263 (272)
T PRK15126 227 ------------FIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWLD 263 (272)
T ss_pred ------------eeccCChHHHHHhCCCCeecCCCcchHHHHHHHHHhc
Confidence 444443 566776 44 467899999999873
No 23
>PRK10976 putative hydrolase; Provisional
Probab=99.94 E-value=7.8e-26 Score=243.58 Aligned_cols=223 Identities=14% Similarity=0.155 Sum_probs=150.4
Q ss_pred cceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC-CceEEccCcEEEEeC-Cce
Q 002955 592 NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPN-YGV 669 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~-~l~liaenGa~I~~~-~~~ 669 (863)
+|+|++|+||||++ .++.++++++++|+++ +++|+.|+|||||+...+.+++..+. ..++|+.||+.|... +..
T Consensus 2 ikli~~DlDGTLl~---~~~~is~~~~~ai~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~ 77 (266)
T PRK10976 2 YQVVASDLDGTLLS---PDHTLSPYAKETLKLL-TARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGNL 77 (266)
T ss_pred ceEEEEeCCCCCcC---CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCCE
Confidence 68999999999999 6788999999999998 89999999999999999999887763 346899999999864 333
Q ss_pred eEEeecCCCCccHHHHHHHHHHHHhhc---------CCCceeeeccc-----------eeEee-cccCCC-Cc-------
Q 002955 670 DWETCVSVPDFSWKQIAEPVMKLYTET---------TDGSTIETKES-----------ALVWN-FQYADP-DF------- 720 (863)
Q Consensus 670 ~w~~~~~~~~~~w~~~v~~i~~~y~~~---------~~gs~ie~k~~-----------~l~~~-y~~~d~-~~------- 720 (863)
.+...++ .+.+.++++...+. ..+.++..... ..... ...... ..
T Consensus 78 i~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~ 151 (266)
T PRK10976 78 IFSHNLD------RDIASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTC 151 (266)
T ss_pred ehhhcCC------HHHHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEEc
Confidence 3333322 12333443332211 11111110000 00000 000000 00
Q ss_pred -chhhHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhh
Q 002955 721 -GSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 799 (863)
Q Consensus 721 -~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 799 (863)
......++.+.+.+.+......+.++..++||+|+++|||.|+++|++++ |+++++|+||||+.||++||+.+|.+
T Consensus 152 ~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~l---gi~~~~viafGD~~NDi~Ml~~ag~~ 228 (266)
T PRK10976 152 DSHEKLLPLEQAINARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKL---GYSLKDCIAFGDGMNDAEMLSMAGKG 228 (266)
T ss_pred CCHHHHHHHHHHHHHHhCCcEEEEEeCCceEEEEcCCCChHHHHHHHHHHc---CCCHHHeEEEcCCcccHHHHHHcCCC
Confidence 01112233344444443322344567789999999999999999999999 99999999999999999999999986
Q ss_pred cCCCCCCCCcceEEEEeCCC----ccccc--eec--CCHhHHHHHHHHHH
Q 002955 800 AAGPSLSPVAEVFACTVGQK----PSKAK--YYL--DDTAEILRMLLGLA 841 (863)
Q Consensus 800 ~~~~~~~~~~~~~av~vG~~----~s~A~--y~l--~d~~eV~~~L~~L~ 841 (863)
+ +||+. +..|+ +++ ++.++|.++|+++.
T Consensus 229 v--------------Am~NA~~~vK~~A~~~~v~~~n~edGVa~~l~~~~ 264 (266)
T PRK10976 229 C--------------IMGNAHQRLKDLLPELEVIGSNADDAVPHYLRKLY 264 (266)
T ss_pred e--------------eecCCcHHHHHhCCCCeecccCchHHHHHHHHHHh
Confidence 3 44442 46666 555 46788999999875
No 24
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.93 E-value=1.6e-24 Score=228.11 Aligned_cols=216 Identities=21% Similarity=0.202 Sum_probs=147.6
Q ss_pred cccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC-CceEEccCcEEEEeC--
Q 002955 590 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPN-- 666 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~-~l~liaenGa~I~~~-- 666 (863)
|++|+|++||||||++ .++.+++++.++|++| +++|+.|+|||||+...+.+++..+. +.++|++||+++...
T Consensus 1 m~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~ 76 (230)
T PRK01158 1 MKIKAIAIDIDGTITD---KDRRLSLKAVEAIRKA-EKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFD 76 (230)
T ss_pred CceeEEEEecCCCcCC---CCCccCHHHHHHHHHH-HHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCC
Confidence 4579999999999998 6778999999999998 88999999999999999998887663 346899999999875
Q ss_pred CceeEEeecCCCCccHHHHHHHHHHHHhhcCCCceeeecc--cee--EeecccCCCCcchhhHHHHHHHHHHHhcCCCeE
Q 002955 667 YGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKE--SAL--VWNFQYADPDFGSCQAKELLDHLESVLANEPVS 742 (863)
Q Consensus 667 ~~~~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~--~~l--~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~~~ 742 (863)
+...+...++ ...+.+....+.|... ...+.... ... ...+.. ....++.+.++.. ...+.
T Consensus 77 ~~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~~--~~~~~ 141 (230)
T PRK01158 77 GKRIFLGDIE----ECEKAYSELKKRFPEA--STSLTKLDPDYRKTEVALRRT-------VPVEEVRELLEEL--GLDLE 141 (230)
T ss_pred CCEEEEcchH----HHHHHHHHHHHhcccc--ceeeecCCcccccceeeeccc-------ccHHHHHHHHHHc--CCcEE
Confidence 3333433221 1222222222222111 00000000 000 000000 0112222333322 12345
Q ss_pred EEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC---
Q 002955 743 VKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK--- 819 (863)
Q Consensus 743 v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--- 819 (863)
+..+..++||.|+++|||.|++++++++ |++++++++|||+.||++||+.+|.+ ++||+.
T Consensus 142 ~~~~~~~~ei~~~~~~Kg~al~~l~~~~---~i~~~~~i~~GD~~NDi~m~~~ag~~--------------vam~Na~~~ 204 (230)
T PRK01158 142 IVDSGFAIHIKSPGVNKGTGLKKLAELM---GIDPEEVAAIGDSENDLEMFEVAGFG--------------VAVANADEE 204 (230)
T ss_pred EEecceEEEEeeCCCChHHHHHHHHHHh---CCCHHHEEEECCchhhHHHHHhcCce--------------EEecCccHH
Confidence 5555678999999999999999999999 99999999999999999999999875 445543
Q ss_pred -ccccceecC--CHhHHHHHHHHHH
Q 002955 820 -PSKAKYYLD--DTAEILRMLLGLA 841 (863)
Q Consensus 820 -~s~A~y~l~--d~~eV~~~L~~L~ 841 (863)
+..|+|++. +.++|.+.|+++.
T Consensus 205 vk~~a~~v~~~n~~~Gv~~~l~~~~ 229 (230)
T PRK01158 205 LKEAADYVTEKSYGEGVAEAIEHLL 229 (230)
T ss_pred HHHhcceEecCCCcChHHHHHHHHh
Confidence 577899874 5788999998763
No 25
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.92 E-value=2.2e-24 Score=232.97 Aligned_cols=236 Identities=17% Similarity=0.130 Sum_probs=151.1
Q ss_pred ccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC--CceEEccCcEEEEeCCc
Q 002955 591 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE--GLGIAAEHGYFVRPNYG 668 (863)
Q Consensus 591 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~--~l~liaenGa~I~~~~~ 668 (863)
.+++|++|+||||++ .++.++++++++|++| +++|+.|++||||+...+.+++..+. ..++|++||+.|+.+..
T Consensus 6 ~~~lI~~DlDGTLL~---~~~~i~~~~~~ai~~l-~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~ 81 (271)
T PRK03669 6 DPLLIFTDLDGTLLD---SHTYDWQPAAPWLTRL-REAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQ 81 (271)
T ss_pred CCeEEEEeCccCCcC---CCCcCcHHHHHHHHHH-HHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCc
Confidence 479999999999998 5677899999999998 88999999999999999999988773 24699999999987643
Q ss_pred e-------eEEeecCCCCccHHHHHHHHHHHHhhcCCCce-eeeccc-----eeEe-e-----cccCCCC---cchhhHH
Q 002955 669 V-------DWETCVSVPDFSWKQIAEPVMKLYTETTDGST-IETKES-----ALVW-N-----FQYADPD---FGSCQAK 726 (863)
Q Consensus 669 ~-------~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~-ie~k~~-----~l~~-~-----y~~~d~~---~~~~~a~ 726 (863)
. .+...++ .+.+..+++...+...-.+ ...... .... . ....... +......
T Consensus 82 ~~~~~~~~~~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (271)
T PRK03669 82 WQDHPDFPRIISGIS------HGEIRQVLNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSD 155 (271)
T ss_pred ccCCCCceEeecCCC------HHHHHHHHHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCH
Confidence 1 1121121 1233333333221100000 000000 0000 0 0000000 0000001
Q ss_pred HHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCC---CcceEEEEeCCcchHHHHHHhhhhcCCC
Q 002955 727 ELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGM---LPDFVLCIGDDRSDEDMFEVIKSAAAGP 803 (863)
Q Consensus 727 el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi---~~d~vlaiGD~~ND~~Mf~~ag~~~~~~ 803 (863)
+.+..+.+.+....+.+..+..++||+|+++|||.|+++|++++ |+ ++++|++|||+.||++||+.+|.+++|+
T Consensus 156 ~~~~~~~~~l~~~~~~~~~~~~~iEi~~~g~sKg~al~~l~~~l---gi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~ 232 (271)
T PRK03669 156 ERMAQFTARLAELGLQFVQGARFWHVLDASAGKDQAANWLIATY---QQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVK 232 (271)
T ss_pred HHHHHHHHHHHHCCCEEEecCeeEEEecCCCCHHHHHHHHHHHH---HhhcCCCceEEEEcCCHHHHHHHHhCCEEEEec
Confidence 11222333332224455556679999999999999999999999 99 9999999999999999999999865554
Q ss_pred CCCCCcceEEEEeCCCccccceecC--CHhHHHHHHHHHHHh
Q 002955 804 SLSPVAEVFACTVGQKPSKAKYYLD--DTAEILRMLLGLAEA 843 (863)
Q Consensus 804 ~~~~~~~~~av~vG~~~s~A~y~l~--d~~eV~~~L~~L~~~ 843 (863)
+...... +.-+.+..|.|+++ +.+++.+.|+.+..+
T Consensus 233 ~~~~~~~----~l~~~~~~~~~~~~~~~~~g~~~~l~~~~~~ 270 (271)
T PRK03669 233 GLNREGV----HLQDDDPARVYRTQREGPEGWREGLDHFFSA 270 (271)
T ss_pred CCCCCCc----ccccccCCceEeccCCCcHHHHHHHHHHHhc
Confidence 4321100 01123457888886 567999999988754
No 26
>PLN02887 hydrolase family protein
Probab=99.92 E-value=4.7e-24 Score=248.53 Aligned_cols=230 Identities=16% Similarity=0.223 Sum_probs=154.5
Q ss_pred HHHHHhcccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC---Cc-------
Q 002955 584 VSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE---GL------- 653 (863)
Q Consensus 584 ~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~---~l------- 653 (863)
.+.| +.++|+|++|+||||++ .++.++++++++|+++ +++|+.|+|||||+...+..++..+. ..
T Consensus 301 ~~~~-~~~iKLIa~DLDGTLLn---~d~~Is~~t~eAI~kl-~ekGi~~vIATGR~~~~i~~~l~~L~l~~~~~~I~~~~ 375 (580)
T PLN02887 301 LRFY-KPKFSYIFCDMDGTLLN---SKSQISETNAKALKEA-LSRGVKVVIATGKARPAVIDILKMVDLAGKDGIISESS 375 (580)
T ss_pred hhhh-ccCccEEEEeCCCCCCC---CCCccCHHHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHhCcccccceEeecc
Confidence 3444 45689999999999999 6788999999999998 89999999999999999998887652 12
Q ss_pred eEEccCcEEEEeC-CceeEEeecCCCCccHHHHHHHHHHHHhhc--------CCCceeeeccceeE-ee--cc-------
Q 002955 654 GIAAEHGYFVRPN-YGVDWETCVSVPDFSWKQIAEPVMKLYTET--------TDGSTIETKESALV-WN--FQ------- 714 (863)
Q Consensus 654 ~liaenGa~I~~~-~~~~w~~~~~~~~~~w~~~v~~i~~~y~~~--------~~gs~ie~k~~~l~-~~--y~------- 714 (863)
++|+.||+.|+.. +...+...++. +.+.++++...+. .++.|......... .+ +.
T Consensus 376 p~I~~NGA~I~d~~g~~I~~~~L~~------e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~~~~~~~~~~~~i 449 (580)
T PLN02887 376 PGVFLQGLLVYGRQGREIYRSNLDQ------EVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSLHTIYHEPKAEIM 449 (580)
T ss_pred cEEeecCeEEEECCCcEEEEEeCCH------HHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHHHHHhhcccccccc
Confidence 3456789999853 33345444332 3333343332211 11111110000000 00 00
Q ss_pred ----cC-C-CCc------ch--hhHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceE
Q 002955 715 ----YA-D-PDF------GS--CQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFV 780 (863)
Q Consensus 715 ----~~-d-~~~------~~--~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~v 780 (863)
+. . ... .. ....++.+.+.+.+.+....+.++..++||+|+|+|||.|+++|++++ |+++++|
T Consensus 450 ~~l~~~~~~~~i~Ki~~~~~~e~~~~~l~~~l~~~~~~~~~v~~S~~~~lEI~p~gvSKG~ALk~L~e~l---GI~~eev 526 (580)
T PLN02887 450 SSVDQLLAAADIQKVIFLDTAEGVSSVLRPYWSEATGDRANVVQAQPDMLEIVPPGTSKGNGVKMLLNHL---GVSPDEI 526 (580)
T ss_pred CCHHHhhcccCeeEEEEEcChHHHHHHHHHHHHHHhcCcEEEEEecCcEEEEecCCCCHHHHHHHHHHHc---CCCHHHE
Confidence 00 0 000 00 011223334444444333455677889999999999999999999999 9999999
Q ss_pred EEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC----ccccceec--CCHhHHHHHHHHHH
Q 002955 781 LCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYL--DDTAEILRMLLGLA 841 (863)
Q Consensus 781 laiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l--~d~~eV~~~L~~L~ 841 (863)
+||||+.||++||+.+|.+ |+||+. +..|+|++ ++.++|.++|++++
T Consensus 527 iAFGDs~NDIeMLe~AG~g--------------VAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLek~~ 579 (580)
T PLN02887 527 MAIGDGENDIEMLQLASLG--------------VALSNGAEKTKAVADVIGVSNDEDGVADAIYRYA 579 (580)
T ss_pred EEEecchhhHHHHHHCCCE--------------EEeCCCCHHHHHhCCEEeCCCCcCHHHHHHHHhh
Confidence 9999999999999999974 555553 67899987 46788999998864
No 27
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=99.92 E-value=8.9e-24 Score=238.51 Aligned_cols=301 Identities=16% Similarity=0.162 Sum_probs=207.1
Q ss_pred hhhHHHHHHHHHHHHHHHHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHH
Q 002955 175 RSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALL 254 (863)
Q Consensus 175 ~~~w~~Y~~vN~~fa~~i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll 254 (863)
...+..|...++.++.++....++ |+||+||++.+.++...+. .++|+.+++|.++.... .+ ....+.+.+.
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~--Dvv~~h~~~~~~~~~~~~~--~~~~~i~~~H~~~~~~~-~~---~~~~~~~~~~ 134 (372)
T cd03792 63 EEEKEIYLEWNEENAERPLLDLDA--DVVVIHDPQPLALPLFKKK--RGRPWIWRCHIDLSSPN-RR---VWDFLQPYIE 134 (372)
T ss_pred HHHHHHHHHHHHHHhccccccCCC--CEEEECCCCchhHHHhhhc--CCCeEEEEeeeecCCCc-HH---HHHHHHHHHH
Confidence 446788888888887764444444 9999999998877766653 36789999999885431 11 1122334445
Q ss_pred hCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh--
Q 002955 255 NADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF-- 332 (863)
Q Consensus 255 ~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-- 332 (863)
.+|.+.+.+.++++.+ +..+ .+ ++|+|||+...... +........+++++
T Consensus 135 ~~d~~i~~~~~~~~~~----------------------~~~~--~~-vipngvd~~~~~~~---~~~~~~~~~~~~~~~~ 186 (372)
T cd03792 135 DYDAAVFHLPEYVPPQ----------------------VPPR--KV-IIPPSIDPLSGKNR---ELSPADIEYILEKYGI 186 (372)
T ss_pred hCCEEeecHHHhcCCC----------------------CCCc--eE-EeCCCCCCCccccC---CCCHHHHHHHHHHhCC
Confidence 6787776653322111 0112 22 79999997532111 11122334455555
Q ss_pred -CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcc
Q 002955 333 -KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQ 411 (863)
Q Consensus 333 -~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~ 411 (863)
.++++|++|||+++.||+..+++||+.+.+++|+++ |+++|..... .++..++.+ ++.++.+ . ..
T Consensus 187 ~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~----l~i~G~g~~~-~~~~~~~~~---~~~~~~~----~--~~ 252 (372)
T cd03792 187 DPERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQ----LVLVGSGATD-DPEGWIVYE---EVLEYAE----G--DP 252 (372)
T ss_pred CCCCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCE----EEEEeCCCCC-CchhHHHHH---HHHHHhC----C--CC
Confidence 478899999999999999999999999988888876 8888864321 122222222 2222221 1 11
Q ss_pred cEEEEcCC-CCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC
Q 002955 412 PVVLIDTP-LQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS 490 (863)
Q Consensus 412 pv~~~~~~-v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~ 490 (863)
.|.++... ++.+++.++|++||+|++||.+||||++++|||+| +.|+|+|..+|..+.+.
T Consensus 253 ~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~-------------------G~Pvv~s~~~~~~~~i~ 313 (372)
T cd03792 253 DIHVLTLPPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWK-------------------GKPVIAGPVGGIPLQIE 313 (372)
T ss_pred CeEEEecCCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHc-------------------CCCEEEcCCCCchhhcc
Confidence 35555433 48999999999999999999999999999999999 56799999999888773
Q ss_pred ---CceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhh-ccCCHHHHHHHHHHHHHH
Q 002955 491 ---GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYV-STHDVAYWARSFLQDLER 547 (863)
Q Consensus 491 ---~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 547 (863)
.|++++ +.+++|++|.++++++ ++++...++.++++ ..+++...++++++.+++
T Consensus 314 ~~~~g~~~~--~~~~~a~~i~~ll~~~-~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 314 DGETGFLVD--TVEEAAVRILYLLRDP-ELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred cCCceEEeC--CcHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 377776 4678999999999864 45555566677766 468999999998877654
No 28
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.92 E-value=1.4e-23 Score=222.32 Aligned_cols=216 Identities=19% Similarity=0.322 Sum_probs=153.9
Q ss_pred eEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC-CceEEccCcEEEEeCCc-eeEE
Q 002955 595 ILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPNYG-VDWE 672 (863)
Q Consensus 595 I~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~-~l~liaenGa~I~~~~~-~~w~ 672 (863)
|++|+||||++ .+..++++++++|++| +++|+.|+++|||+...+.+++..++ ..++|+.||+++....+ ..+.
T Consensus 1 i~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~ 76 (254)
T PF08282_consen 1 IFSDLDGTLLN---SDGKISPETIEALKEL-QEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYE 76 (254)
T ss_dssp EEEECCTTTCS---TTSSSCHHHHHHHHHH-HHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEE
T ss_pred cEEEECCceec---CCCeeCHHHHHHHHhh-cccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchh
Confidence 79999999999 6778999999999998 77899999999999999999998774 46899999999944433 3444
Q ss_pred eecCCCCccHHHHHHHHHHHHhhcC--------CCceeeecc--c--------eeEee-cc--c--CCCC-------cch
Q 002955 673 TCVSVPDFSWKQIAEPVMKLYTETT--------DGSTIETKE--S--------ALVWN-FQ--Y--ADPD-------FGS 722 (863)
Q Consensus 673 ~~~~~~~~~w~~~v~~i~~~y~~~~--------~gs~ie~k~--~--------~l~~~-y~--~--~d~~-------~~~ 722 (863)
..++ .+.+..+++...+.. ...++.... . ...+. .. . .... ...
T Consensus 77 ~~i~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~ 150 (254)
T PF08282_consen 77 KPID------SDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDP 150 (254)
T ss_dssp ESB-------HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCH
T ss_pred hhee------ccchhheeehhhhcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccc
Confidence 4332 233334443333221 111111110 0 00000 00 0 0000 012
Q ss_pred hhHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCC
Q 002955 723 CQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAG 802 (863)
Q Consensus 723 ~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~ 802 (863)
.+...+.+.+.+.+.+....+.++..++||+|+++|||.|+++|++++ |++++++++|||+.||++||+.++.
T Consensus 151 ~~~~~l~~~l~~~~~~~~~~~~~~~~~lei~~~~vsK~~ai~~l~~~~---~i~~~~~~~~GD~~ND~~Ml~~~~~---- 223 (254)
T PF08282_consen 151 EDLEQLREELKKKFPNLIDVVRSSPYFLEITPKGVSKGSAIKYLLEYL---GISPEDIIAFGDSENDIEMLELAGY---- 223 (254)
T ss_dssp HHHHHHHHHHHHHHTTTEEEEEEETTEEEEEETTSSHHHHHHHHHHHH---TTSGGGEEEEESSGGGHHHHHHSSE----
T ss_pred hhhhhhhhhhccccCcceeEEEecccceEEeeCCCCHHHHHHHHhhhc---ccccceeEEeecccccHhHHhhcCe----
Confidence 345566777777776654677789999999999999999999999999 9999999999999999999999986
Q ss_pred CCCCCCcceEEEEeCCC----ccccceecCC--HhHHHHHH
Q 002955 803 PSLSPVAEVFACTVGQK----PSKAKYYLDD--TAEILRML 837 (863)
Q Consensus 803 ~~~~~~~~~~av~vG~~----~s~A~y~l~d--~~eV~~~L 837 (863)
+++||+. +..|+|++.+ .++|++.|
T Consensus 224 ----------~~am~na~~~~k~~a~~i~~~~~~~gv~~~i 254 (254)
T PF08282_consen 224 ----------SVAMGNATPELKKAADYITPSNNDDGVAKAI 254 (254)
T ss_dssp ----------EEEETTS-HHHHHHSSEEESSGTCTHHHHHH
T ss_pred ----------EEEEcCCCHHHHHhCCEEecCCCCChHHHhC
Confidence 5667764 5889998753 37787765
No 29
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.91 E-value=1.3e-23 Score=226.95 Aligned_cols=222 Identities=20% Similarity=0.278 Sum_probs=148.5
Q ss_pred cccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC-CceEEccCcEEEEeC-C
Q 002955 590 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPN-Y 667 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~-~l~liaenGa~I~~~-~ 667 (863)
|++|+|++|+||||++ .++.++++++++|+++ +++|+.|+|||||+...+.+.+..+. ..++|+.||+.|+.. +
T Consensus 1 M~~kli~~DlDGTLl~---~~~~i~~~~~~ai~~~-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~d~~~ 76 (272)
T PRK10530 1 MTYRVIALDLDGTLLT---PKKTILPESLEALARA-REAGYKVIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYQA 76 (272)
T ss_pred CCccEEEEeCCCceEC---CCCccCHHHHHHHHHH-HHCCCEEEEEcCCChHHHHHHHHhcCCCCCEEEcCCcEEEecCC
Confidence 4589999999999998 6788999999999998 88999999999999999999888773 346899999999863 3
Q ss_pred ce-eEEeecCCCCccHHHHHHHHHHHHhhcC--------CCceeeeccc----eeEe----------ecccCCC------
Q 002955 668 GV-DWETCVSVPDFSWKQIAEPVMKLYTETT--------DGSTIETKES----ALVW----------NFQYADP------ 718 (863)
Q Consensus 668 ~~-~w~~~~~~~~~~w~~~v~~i~~~y~~~~--------~gs~ie~k~~----~l~~----------~y~~~d~------ 718 (863)
+. .+...++. +.+..+++...+.. .+.+...... ...| .+...+.
T Consensus 77 ~~~l~~~~l~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (272)
T PRK10530 77 KKVLEADPLPV------QQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQVDSLAQAAR 150 (272)
T ss_pred CEEEEecCCCH------HHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEEcccHHHHHh
Confidence 33 33333321 23333333322210 0111110000 0000 0000000
Q ss_pred --C--cc-------hhhHHHHHHHHHHHhcCCCe-EEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCC
Q 002955 719 --D--FG-------SCQAKELLDHLESVLANEPV-SVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDD 786 (863)
Q Consensus 719 --~--~~-------~~~a~el~~~L~~~l~~~~~-~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~ 786 (863)
. +. .....++.+.+.+. ..+ .+.++..++||.|++++||.|++++++++ |++++++++|||+
T Consensus 151 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~---~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~---gi~~~e~i~~GD~ 224 (272)
T PRK10530 151 QVNAIWKFALTHEDLPQLQHFAKHVEHE---LGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQ---GWSMKNVVAFGDN 224 (272)
T ss_pred hcCCcEEEEEecCCHHHHHHHHHHHhhh---cCceEEEecCceEEEecCCCChHHHHHHHHHHc---CCCHHHeEEeCCC
Confidence 0 00 00112222222222 222 33455678999999999999999999999 9999999999999
Q ss_pred cchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC----ccccceecC--CHhHHHHHHHHHH
Q 002955 787 RSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLD--DTAEILRMLLGLA 841 (863)
Q Consensus 787 ~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~--d~~eV~~~L~~L~ 841 (863)
.||++||+.+|.+ |+||+. +..|+|++. +.++|.++|+++.
T Consensus 225 ~NDi~m~~~ag~~--------------vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~~~~ 271 (272)
T PRK10530 225 FNDISMLEAAGLG--------------VAMGNADDAVKARADLVIGDNTTPSIAEFIYSHV 271 (272)
T ss_pred hhhHHHHHhcCce--------------EEecCchHHHHHhCCEEEecCCCCcHHHHHHHHh
Confidence 9999999999964 555553 467899874 5788999998864
No 30
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=99.91 E-value=4.5e-24 Score=220.62 Aligned_cols=195 Identities=26% Similarity=0.326 Sum_probs=149.1
Q ss_pred eeEecCCccccCCCCCC-CCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcEEEEeCCceeEE
Q 002955 594 AILLDYDGTIMVPGSIS-TSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWE 672 (863)
Q Consensus 594 lI~~DlDGTLl~~~~~~-~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa~I~~~~~~~w~ 672 (863)
+|++|+||||++ .+ ..+++++.++|++| ++.|+.|+++|||+...+.+++..+ +.+++++||++|+.++...|.
T Consensus 1 li~~D~DgTL~~---~~~~~~~~~~~~~l~~l-~~~g~~~~i~TGR~~~~~~~~~~~~-~~~~i~~nGa~i~~~~~~~~~ 75 (204)
T TIGR01484 1 LLFFDLDGTLLD---PNAHELSPETIEALERL-REAGVKVVLVTGRSLAEIKELLKQL-PLPLIAENGALIFYPGEILYI 75 (204)
T ss_pred CEEEeCcCCCcC---CCCCcCCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHhC-CCCEEECCCcEEEECCEEEEE
Confidence 689999999998 44 68999999999999 6677999999999999999999874 588999999999987776666
Q ss_pred eecCCCC-ccHH---HHHHHHHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcC-CCeEEE-EC
Q 002955 673 TCVSVPD-FSWK---QIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLAN-EPVSVK-SG 746 (863)
Q Consensus 673 ~~~~~~~-~~w~---~~v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~-~~~~v~-~g 746 (863)
. .... ..|. +.+..++..+.+..++..++.+...+.++|... ........++.+.++....+ ..+.+. ++
T Consensus 76 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 151 (204)
T TIGR01484 76 E--PSDVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAVAIHYVGA--ELGQELDSKMRERLEKIGRNDLELEAIYVG 151 (204)
T ss_pred c--ccccHHHHHHhhhhcCceeeeeccccccceeecccceeeEEEecc--chhhHHHHHHHHHHHhhccccCcEEEEEec
Confidence 4 1111 1122 122233444445566777788888889988764 11112233444555444221 346666 79
Q ss_pred CcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhc
Q 002955 747 PNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAA 800 (863)
Q Consensus 747 ~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~ 800 (863)
..++||+|++++||.+++++++++ |++++++++|||+.||++||+.++.++
T Consensus 152 ~~~~ev~p~~~~K~~~~~~~~~~~---~~~~~~~~~~GD~~nD~~~~~~~~~~v 202 (204)
T TIGR01484 152 KTDLEVLPAGVDKGSALQALLKEL---NGKRDEILAFGDSGNDEEMFEVAGLAV 202 (204)
T ss_pred CCEEEEecCCCChHHHHHHHHHHh---CCCHHHEEEEcCCHHHHHHHHHcCCce
Confidence 999999999999999999999999 999999999999999999999999764
No 31
>PLN02939 transferase, transferring glycosyl groups
Probab=99.91 E-value=2.8e-22 Score=239.05 Aligned_cols=318 Identities=14% Similarity=0.139 Sum_probs=211.8
Q ss_pred HHHHHHHHHHHHHHHhh-cCCCCCEEEEeCcccchHHHHHHhh-----CCCCeEEEEEeCC-----CCChhHhhc-CCC-
Q 002955 179 QAYVSVNKIFADKVMEV-ISPDDDFVWVHDYHLMVLPTFLRKR-----FNRVKLGFFLHSP-----FPSSEIYRT-LPI- 245 (863)
Q Consensus 179 ~~Y~~vN~~fa~~i~~~-~~p~~D~VwvhDyhl~llp~~lr~~-----~~~~~i~~flH~P-----fP~~e~~r~-lp~- 245 (863)
..|.-+.+..++-+... .+| |+|++||||..++|.++.+. +.++++.|++|-- ||...+..+ +|+
T Consensus 591 ~RF~~FsrAaLe~~~~~~~~P--DIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~ 668 (977)
T PLN02939 591 KRFSYFSRAALELLYQSGKKP--DIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVH 668 (977)
T ss_pred HHHHHHHHHHHHHHHhcCCCC--CEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHH
Confidence 34444444444444332 355 99999999999986555442 4568999999953 232111111 221
Q ss_pred --------------hHHHH-HHHHhCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCch
Q 002955 246 --------------RDELL-RALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIG 310 (863)
Q Consensus 246 --------------r~eil-~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~ 310 (863)
+-.++ -|+..||.|-.-++.|++.-++ ..--|++. .+..+..++.++|+|||.+
T Consensus 669 ~l~~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~t--e~G~GL~~---------~L~~~~~Kl~gIlNGID~e 737 (977)
T PLN02939 669 QLDRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRS--EGGRGLQD---------TLKFHSKKFVGILNGIDTD 737 (977)
T ss_pred HccChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHH--HhccchHH---------HhccccCCceEEecceehh
Confidence 11122 4677789888888888887654 11011110 1233456778899999999
Q ss_pred HHHhhcCC-----------chHHHHHHHHHHHhC------CCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEE
Q 002955 311 QLQSVLNL-----------PETEAKVAELQDQFK------GQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVL 373 (863)
Q Consensus 311 ~~~~~~~~-----------~~~~~~~~~l~~~~~------~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvL 373 (863)
.|.+.... .........+++++. +.++|++|||+++.||+..++.|+.++++ ++. .|
T Consensus 738 ~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~dv----qL 811 (977)
T PLN02939 738 TWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LGG----QF 811 (977)
T ss_pred hcCCccccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cCC----EE
Confidence 88643210 001122455777772 35899999999999999999999998875 333 48
Q ss_pred EEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeee
Q 002955 374 VQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYII 453 (863)
Q Consensus 374 vqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a 453 (863)
|++|. |++ ..+++++.+++.+.+. ..-+.+.+.++..+...+|++||+||+||.+|||||+++|||+
T Consensus 812 VIvGd-----Gp~-~~~e~eL~~La~~l~l-------~drV~FlG~~de~lah~IYAaADIFLmPSr~EPfGLvqLEAMA 878 (977)
T PLN02939 812 VLLGS-----SPV-PHIQREFEGIADQFQS-------NNNIRLILKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIAMR 878 (977)
T ss_pred EEEeC-----CCc-HHHHHHHHHHHHHcCC-------CCeEEEEeccCHHHHHHHHHhCCEEEECCCccCCcHHHHHHHH
Confidence 88873 222 2345566666665521 1223445667777788999999999999999999999999999
Q ss_pred eecCCcccccccCCCCCCCCCccEEecccccCcccCC------------CceEeCCCCHHHHHHHHHHHhCC---CHHHH
Q 002955 454 CRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS------------GAIRVNPWNIDAVAEAMDSALGV---SDAEK 518 (863)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~------------~al~VnP~d~~~~A~ai~~aL~m---~~~er 518 (863)
| |.|+|++..+|..+.+. +|++++|.|+++++++|.+++.. .++.+
T Consensus 879 y-------------------GtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~ 939 (977)
T PLN02939 879 Y-------------------GSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVW 939 (977)
T ss_pred C-------------------CCCEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHH
Confidence 9 56789999999887662 48999999999999999999862 23333
Q ss_pred HHHHHHHhhhhccCCHHHHHHHHHHHHHHHH
Q 002955 519 QMRHEKHYRYVSTHDVAYWARSFLQDLERAC 549 (863)
Q Consensus 519 ~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~ 549 (863)
+...++. ....+++...++.+.+-..++.
T Consensus 940 ~~L~~~a--m~~dFSWe~~A~qYeeLY~~ll 968 (977)
T PLN02939 940 KQLVQKD--MNIDFSWDSSASQYEELYQRAV 968 (977)
T ss_pred HHHHHHH--HHhcCCHHHHHHHHHHHHHHHH
Confidence 3222222 2356899999998887666554
No 32
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=99.91 E-value=2.4e-22 Score=227.66 Aligned_cols=269 Identities=19% Similarity=0.270 Sum_probs=197.4
Q ss_pred CCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHHHHHHHHhhhC
Q 002955 200 DDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLG 279 (863)
Q Consensus 200 ~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~Fl~~~~r~lg 279 (863)
+|+|+||+.. -+-..++++.|++++.+.+|..|. .+.+ + .++.|-+.+. +.+.++.. ..
T Consensus 100 ~~vi~v~~~~--~~~~~~~~~~~~~~~v~~~h~~~~-~~~~----------~---~~~~ii~~S~-~~~~~~~~---~~- 158 (380)
T PRK15484 100 DSVIVIHNSM--KLYRQIRERAPQAKLVMHMHNAFE-PELL----------D---KNAKIIVPSQ-FLKKFYEE---RL- 158 (380)
T ss_pred CcEEEEeCcH--HhHHHHHhhCCCCCEEEEEecccC-hhHh----------c---cCCEEEEcCH-HHHHHHHh---hC-
Confidence 5999999843 445677888999999999997762 1121 1 3566666554 34444321 00
Q ss_pred ceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh---CCCeEEEeecCcccccCHHHHHHH
Q 002955 280 VSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMDIFKGISLKLLA 356 (863)
Q Consensus 280 ~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~~KGi~~~l~A 356 (863)
...++.++|+|||...|... . ...+++++ .++++|+++||+.+.||+..+++|
T Consensus 159 ----------------~~~~i~vIpngvd~~~~~~~-----~---~~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~Li~A 214 (380)
T PRK15484 159 ----------------PNADISIVPNGFCLETYQSN-----P---QPNLRQQLNISPDETVLLYAGRISPDKGILLLMQA 214 (380)
T ss_pred ----------------CCCCEEEecCCCCHHHcCCc-----c---hHHHHHHhCCCCCCeEEEEeccCccccCHHHHHHH
Confidence 11235779999998877531 1 11233444 367899999999999999999999
Q ss_pred HHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccee
Q 002955 357 MEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCL 436 (863)
Q Consensus 357 ~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v 436 (863)
+.++.+++|+++ |+++|.+......+..++++++.+++.+.+. .+ .+.|.++.+++..+|+.||+||
T Consensus 215 ~~~l~~~~p~~~----lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~--------~v-~~~G~~~~~~l~~~~~~aDv~v 281 (380)
T PRK15484 215 FEKLATAHSNLK----LVVVGDPTASSKGEKAAYQKKVLEAAKRIGD--------RC-IMLGGQPPEKMHNYYPLADLVV 281 (380)
T ss_pred HHHHHHhCCCeE----EEEEeCCccccccchhHHHHHHHHHHHhcCC--------cE-EEeCCCCHHHHHHHHHhCCEEE
Confidence 999999999876 9988865432222334566667666665531 23 5677899999999999999999
Q ss_pred eccc-ccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC---Cce-EeCCCCHHHHHHHHHHHh
Q 002955 437 VTAV-RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAI-RVNPWNIDAVAEAMDSAL 511 (863)
Q Consensus 437 vtS~-~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al-~VnP~d~~~~A~ai~~aL 511 (863)
+||. .||||++++|||+| |.|+|+|..+|+.+.+. .|+ +++|.|++++|++|.+++
T Consensus 282 ~pS~~~E~f~~~~lEAma~-------------------G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll 342 (380)
T PRK15484 282 VPSQVEEAFCMVAVEAMAA-------------------GKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTL 342 (380)
T ss_pred eCCCCccccccHHHHHHHc-------------------CCCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHH
Confidence 9997 59999999999999 56799999988887773 365 678999999999999999
Q ss_pred CCCHHHHHHHHHHHhhhh-ccCCHHHHHHHHHHHHHH
Q 002955 512 GVSDAEKQMRHEKHYRYV-STHDVAYWARSFLQDLER 547 (863)
Q Consensus 512 ~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 547 (863)
++++. +...++.++++ ..+++...++++++.|+.
T Consensus 343 ~d~~~--~~~~~~ar~~~~~~fsw~~~a~~~~~~l~~ 377 (380)
T PRK15484 343 ADPEL--TQIAEQAKDFVFSKYSWEGVTQRFEEQIHN 377 (380)
T ss_pred cCHHH--HHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 87643 34455566554 668999999998888765
No 33
>PLN02316 synthase/transferase
Probab=99.90 E-value=6.9e-22 Score=239.97 Aligned_cols=308 Identities=14% Similarity=0.132 Sum_probs=214.6
Q ss_pred HHHHHHHHHHHHHHHHhh-cCCCCCEEEEeCcccchHHHHHHhh-----CCCCeEEEEEeCCCCChhHhhcCCChHHHHH
Q 002955 178 WQAYVSVNKIFADKVMEV-ISPDDDFVWVHDYHLMVLPTFLRKR-----FNRVKLGFFLHSPFPSSEIYRTLPIRDELLR 251 (863)
Q Consensus 178 w~~Y~~vN~~fa~~i~~~-~~p~~D~VwvhDyhl~llp~~lr~~-----~~~~~i~~flH~PfP~~e~~r~lp~r~eil~ 251 (863)
..-|..+++..++.+... .+| |+|++||+|-.++|.++++. +.++++.+++|-.- |. +..+-.
T Consensus 689 ~~RF~~F~~Aale~l~~~~~~P--DIIHaHDW~talva~llk~~~~~~~~~~~p~V~TiHnl~-----~~----~n~lk~ 757 (1036)
T PLN02316 689 GERFGFFCHAALEFLLQSGFHP--DIIHCHDWSSAPVAWLFKDHYAHYGLSKARVVFTIHNLE-----FG----ANHIGK 757 (1036)
T ss_pred HHHHHHHHHHHHHHHHhcCCCC--CEEEECCChHHHHHHHHHHhhhhhccCCCCEEEEeCCcc-----cc----hhHHHH
Confidence 444555555555544332 345 99999999999999999875 35689999999431 11 122446
Q ss_pred HHHhCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcC--Cc-----h----
Q 002955 252 ALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLN--LP-----E---- 320 (863)
Q Consensus 252 ~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~--~~-----~---- 320 (863)
++..||.|---++.|++..+.. +. + ..+..++.++|+|||++.|.+... .| +
T Consensus 758 ~l~~AD~ViTVS~tya~EI~~~-----~~----------l--~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~ 820 (1036)
T PLN02316 758 AMAYADKATTVSPTYSREVSGN-----SA----------I--APHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVE 820 (1036)
T ss_pred HHHHCCEEEeCCHHHHHHHHhc-----cC----------c--ccccCCEEEEECCccccccCCcccccccccCCchhhhh
Confidence 7788999988888888766531 00 0 112346778999999988754211 00 0
Q ss_pred -HHHHHHHHHHHhC----CCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHH
Q 002955 321 -TEAKVAELQDQFK----GQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETH 395 (863)
Q Consensus 321 -~~~~~~~l~~~~~----~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~ 395 (863)
.......+++++. +.++|++|+||++.||+..++.|+.+++++ + +.||++|. |++ ..++.++.
T Consensus 821 gK~~~k~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~--~----~qlVIvG~-----Gpd-~~~e~~l~ 888 (1036)
T PLN02316 821 GKRAAKEALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLER--N----GQVVLLGS-----APD-PRIQNDFV 888 (1036)
T ss_pred hhhhhHHHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhhc--C----cEEEEEeC-----CCC-HHHHHHHH
Confidence 1123445677762 568999999999999999999999999863 3 33777773 333 34567777
Q ss_pred HHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCc
Q 002955 396 ATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSS 475 (863)
Q Consensus 396 ~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g 475 (863)
+++.+++..+.. .|.+ .+..+......+|++||+||+||..|||||+.+|||+| +.
T Consensus 889 ~La~~Lg~~~~~----rV~f-~g~~de~lah~iyaaADiflmPS~~EP~GLvqLEAMa~-------------------Gt 944 (1036)
T PLN02316 889 NLANQLHSSHHD----RARL-CLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRY-------------------GS 944 (1036)
T ss_pred HHHHHhCccCCC----eEEE-EecCCHHHHHHHHHhCcEEEeCCcccCccHHHHHHHHc-------------------CC
Confidence 777777543321 2333 33444444458999999999999999999999999999 56
Q ss_pred cEEecccccCcccC-C---------------CceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhh-ccCCHHHHH
Q 002955 476 MLVVSEFVGCSPSL-S---------------GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYV-STHDVAYWA 538 (863)
Q Consensus 476 ~lVlSe~~G~~~~l-~---------------~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~ 538 (863)
|+|++..+|..+.+ + +|++|+|.|++++++||.++|......+....+..++.+ ..+++..-+
T Consensus 945 ppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A 1024 (1036)
T PLN02316 945 IPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPA 1024 (1036)
T ss_pred CeEEEcCCCcHhhccccccccccccccccCCceEEeCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHH
Confidence 78999999999887 2 389999999999999999999864332222233333433 458888888
Q ss_pred HHHHHHHHHHH
Q 002955 539 RSFLQDLERAC 549 (863)
Q Consensus 539 ~~~l~~l~~~~ 549 (863)
+.+++-.+++.
T Consensus 1025 ~~Y~~LY~~a~ 1035 (1036)
T PLN02316 1025 LDYMELYHSAR 1035 (1036)
T ss_pred HHHHHHHHHHh
Confidence 88887666543
No 34
>PRK00654 glgA glycogen synthase; Provisional
Probab=99.90 E-value=3.4e-22 Score=232.34 Aligned_cols=293 Identities=20% Similarity=0.218 Sum_probs=193.9
Q ss_pred CEEEEeCcccchHHHHHHhhC----CCCeEEEEEeCCCC----ChhHhhcC--CC-------------hHHHHHHHHhCC
Q 002955 201 DFVWVHDYHLMVLPTFLRKRF----NRVKLGFFLHSPFP----SSEIYRTL--PI-------------RDELLRALLNAD 257 (863)
Q Consensus 201 D~VwvhDyhl~llp~~lr~~~----~~~~i~~flH~PfP----~~e~~r~l--p~-------------r~eil~~ll~~d 257 (863)
|+|++||||-.++|.++++++ .++++.++.|..-. ..+.+..+ |. ..-+..++..||
T Consensus 120 DiiH~h~w~~~~~~~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad 199 (466)
T PRK00654 120 DIVHAHDWHTGLIPALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYAD 199 (466)
T ss_pred ceEEECCcHHHHHHHHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHhcC
Confidence 999999999999999998663 46899999997521 11111111 10 011223455666
Q ss_pred EecccCHHHHHHHHHHHHhhhCceecccCceeeEE--EcCeEEEEEEeccccCchHHHhhcCC-----------chHHHH
Q 002955 258 LIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLE--YFGRTVSIKILPVGIHIGQLQSVLNL-----------PETEAK 324 (863)
Q Consensus 258 ligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~--~~gr~~~i~v~p~GId~~~~~~~~~~-----------~~~~~~ 324 (863)
.|---++.|++..+.. ..| . +++ +..+..++.++|+|||.+.|.+.... ......
T Consensus 200 ~vitvS~~~~~ei~~~---~~~------~---gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~ 267 (466)
T PRK00654 200 RVTTVSPTYAREITTP---EFG------Y---GLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAEN 267 (466)
T ss_pred cCeeeCHHHHHHhccc---cCC------c---ChHHHHHhcccCceEecCCCCccccCCccCcccccccChhhhhchHHH
Confidence 6655555555433210 000 0 000 11234468899999999988642110 011123
Q ss_pred HHHHHHHhC----CCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHH
Q 002955 325 VAELQDQFK----GQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRR 400 (863)
Q Consensus 325 ~~~l~~~~~----~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~ 400 (863)
.+.+++++. +.++|++|||+++.||+..+++|+++++++ + +.|+.+|.+ + ..+++++++++++
T Consensus 268 k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~--~----~~lvivG~g-----~--~~~~~~l~~l~~~ 334 (466)
T PRK00654 268 KRALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQ--G----GQLVLLGTG-----D--PELEEAFRALAAR 334 (466)
T ss_pred HHHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHhc--C----CEEEEEecC-----c--HHHHHHHHHHHHH
Confidence 345666662 568999999999999999999999998764 3 348877732 1 1244556666555
Q ss_pred HhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEec
Q 002955 401 INKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVS 480 (863)
Q Consensus 401 IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlS 480 (863)
.+. .+.++.+. +.+....+|+.||+||+||.+||||++.+|||+| +.|+|+|
T Consensus 335 ~~~--------~v~~~~g~-~~~~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~-------------------G~p~V~~ 386 (466)
T PRK00654 335 YPG--------KVGVQIGY-DEALAHRIYAGADMFLMPSRFEPCGLTQLYALRY-------------------GTLPIVR 386 (466)
T ss_pred CCC--------cEEEEEeC-CHHHHHHHHhhCCEEEeCCCCCCchHHHHHHHHC-------------------CCCEEEe
Confidence 421 14455544 5666779999999999999999999999999999 5679999
Q ss_pred ccccCcccC-C--------CceEeCCCCHHHHHHHHHHHhCCC--HHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHH
Q 002955 481 EFVGCSPSL-S--------GAIRVNPWNIDAVAEAMDSALGVS--DAEKQMRHEKHYRYVSTHDVAYWARSFLQDLERA 548 (863)
Q Consensus 481 e~~G~~~~l-~--------~al~VnP~d~~~~A~ai~~aL~m~--~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 548 (863)
..+|..+.+ + .|++|+|.|+++++++|.++++.. ++.++...++.. ...+++..-++++++-.+++
T Consensus 387 ~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~lY~~~ 463 (466)
T PRK00654 387 RTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLRALRRALELYRQPPLWRALQRQAM--AQDFSWDKSAEEYLELYRRL 463 (466)
T ss_pred CCCCccceeecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCChHHHHHHHHHHHHHH
Confidence 999999877 3 389999999999999999998631 222222222222 25688888888877665554
No 35
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=99.90 E-value=3.5e-22 Score=230.65 Aligned_cols=314 Identities=17% Similarity=0.148 Sum_probs=195.4
Q ss_pred HHHHHHHHHHHHHHHHhhc-CCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChh--Hhh------------c
Q 002955 178 WQAYVSVNKIFADKVMEVI-SPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE--IYR------------T 242 (863)
Q Consensus 178 w~~Y~~vN~~fa~~i~~~~-~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e--~~r------------~ 242 (863)
|.....+...+...+.+.. +| |+|++|+++-.++..++++.. ++|+.++.|....... +.. .
T Consensus 94 ~~~~~~~~~~l~~~~~~~~~~~--DvIH~h~~~~~~~~~~~~~~~-~~p~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (439)
T TIGR02472 94 WPYLDELADNLLQHLRQQGHLP--DLIHAHYADAGYVGARLSRLL-GVPLIFTGHSLGREKRRRLLAAGLKPQQIEKQYN 170 (439)
T ss_pred hhhHHHHHHHHHHHHHHcCCCC--CEEEEcchhHHHHHHHHHHHh-CCCEEEecccccchhhhhcccCCCChhhhhhhcc
Confidence 4333444444444443322 34 999999988777777776655 6799999997532210 000 0
Q ss_pred CCChHH-HHHHHHhCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEEE-cCeEEEEEEeccccCchHHHhhcCCch
Q 002955 243 LPIRDE-LLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEY-FGRTVSIKILPVGIHIGQLQSVLNLPE 320 (863)
Q Consensus 243 lp~r~e-il~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~-~gr~~~i~v~p~GId~~~~~~~~~~~~ 320 (863)
++.+-. -...+..+|.|...+...++.-+. .+ +-...++.++|+|||++.|.+....+.
T Consensus 171 ~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~-------------------~~~~~~~~ki~vIpnGvd~~~f~~~~~~~~ 231 (439)
T TIGR02472 171 ISRRIEAEEETLAHASLVITSTHQEIEEQYA-------------------LYDSYQPERMQVIPPGVDLSRFYPPQSSEE 231 (439)
T ss_pred hHHHHHHHHHHHHhCCEEEECCHHHHHHHHH-------------------hccCCCccceEEECCCcChhhcCCCCcccc
Confidence 000100 012233455554444322211110 01 112346788999999999864322111
Q ss_pred HHHHHHHHHHHh--CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHH----HHHHHH
Q 002955 321 TEAKVAELQDQF--KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQ----EVQSET 394 (863)
Q Consensus 321 ~~~~~~~l~~~~--~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~----~~~~~v 394 (863)
.......+++.. +++++|++|||+++.||+..+++||.++.+..+.. ++++ .+|... ..+.++ ++.+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~A~~~l~~~~~~~--~l~l-i~G~g~--~~~~l~~~~~~~~~~~ 306 (439)
T TIGR02472 232 TSEIDNLLAPFLKDPEKPPILAISRPDRRKNIPSLVEAYGRSPKLQEMA--NLVL-VLGCRD--DIRKMESQQREVLQKV 306 (439)
T ss_pred chhHHHHHHhhccccCCcEEEEEcCCcccCCHHHHHHHHHhChhhhhhc--cEEE-EeCCcc--ccccccHHHHHHHHHH
Confidence 111112222221 46789999999999999999999998643221111 2322 344211 111111 122233
Q ss_pred HHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhc----cceeecccccCCCccceeeeeeecCCcccccccCCCCC
Q 002955 395 HATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIA----ECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPS 470 (863)
Q Consensus 395 ~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~A----Dv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~ 470 (863)
..+++++ +....+.+.|.++.+++.++|+.| |+||+||.+||||++++|||||
T Consensus 307 ~~~~~~~-------~l~~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~---------------- 363 (439)
T TIGR02472 307 LLLIDRY-------DLYGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAAC---------------- 363 (439)
T ss_pred HHHHHHc-------CCCceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHh----------------
Confidence 3444443 233345677889999999999988 9999999999999999999999
Q ss_pred CCCCccEEecccccCcccCC---CceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhh-ccCCHHHHHHHHHHHH
Q 002955 471 TAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYV-STHDVAYWARSFLQDL 545 (863)
Q Consensus 471 ~~~~g~lVlSe~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l 545 (863)
+.|+|+|..+|+.+.+. +|++|+|.|++++|++|.++++.+ .+++...++.++++ ..+++..-++++++-|
T Consensus 364 ---G~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 364 ---GLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDALSDS-SQWQLWSRNGIEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred ---CCCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 56799999999888873 489999999999999999999854 45555666666666 4588888888777654
No 36
>PRK14098 glycogen synthase; Provisional
Probab=99.90 E-value=2.9e-22 Score=233.21 Aligned_cols=320 Identities=15% Similarity=0.152 Sum_probs=212.2
Q ss_pred hhHHHHHHHHHHHHHHHHhh-cCCCCCEEEEeCcccchHHHHHHhhC------CCCeEEEEEeCCC-----CChhHhhcC
Q 002955 176 SLWQAYVSVNKIFADKVMEV-ISPDDDFVWVHDYHLMVLPTFLRKRF------NRVKLGFFLHSPF-----PSSEIYRTL 243 (863)
Q Consensus 176 ~~w~~Y~~vN~~fa~~i~~~-~~p~~D~VwvhDyhl~llp~~lr~~~------~~~~i~~flH~Pf-----P~~e~~r~l 243 (863)
+....|.-.++..++.+... ++| |+|++||||-.++|.+|+++. .++|+.++.|... |.......+
T Consensus 119 d~~~rf~~f~~a~l~~~~~~~~~p--DiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~ 196 (489)
T PRK14098 119 GSAEKVIFFNVGVLETLQRLGWKP--DIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLL 196 (489)
T ss_pred cHHHHHHHHHHHHHHHHHhcCCCC--CEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhC
Confidence 34566776777776666442 456 999999999999999998754 4789999999742 221111113
Q ss_pred CCh------------HHHHHHHHhCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchH
Q 002955 244 PIR------------DELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQ 311 (863)
Q Consensus 244 p~r------------~eil~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~ 311 (863)
|+. .-+-.++..||.|---++.|+++-++....-.|++. ....+..++.++|+|||.+.
T Consensus 197 ~~~~~~~~~~~~~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~~---------~l~~~~~kl~~I~NGID~~~ 267 (489)
T PRK14098 197 PEEVCSGLHREGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLDK---------VLEERKMRLHGILNGIDTRQ 267 (489)
T ss_pred CHHhhhhhhhcCCcccHHHHHHHhcCcceeeCHHHHHHhCcCCCCCcChHH---------HHHhcCCCeeEEeCCccccc
Confidence 321 112345677787776677777654320000001100 00113457788999999998
Q ss_pred HHhhcCCc-----------hHHHHHHHHHHHh-----CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEE
Q 002955 312 LQSVLNLP-----------ETEAKVAELQDQF-----KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQ 375 (863)
Q Consensus 312 ~~~~~~~~-----------~~~~~~~~l~~~~-----~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvq 375 (863)
|.+..... ........+++++ +++++|++|+|+++.||+..+++|+.++++. + +.|++
T Consensus 268 ~~p~~d~~~~~~~~~~~~~~k~~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~--~----~~lvi 341 (489)
T PRK14098 268 WNPSTDKLIKKRYSIERLDGKLENKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVEL--D----IQLVI 341 (489)
T ss_pred cCCcccccccccCCcchhhhHHHHHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHhc--C----cEEEE
Confidence 86432100 0111233455555 2567999999999999999999999998753 3 44888
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeee
Q 002955 376 IANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICR 455 (863)
Q Consensus 376 i~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~ 455 (863)
+|. |+ ..+++++++++++.. + .| .+.+.++.+++..+|++||+||+||..||||++.+|||+|
T Consensus 342 vG~-----G~--~~~~~~l~~l~~~~~------~--~V-~~~g~~~~~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~- 404 (489)
T PRK14098 342 CGS-----GD--KEYEKRFQDFAEEHP------E--QV-SVQTEFTDAFFHLAIAGLDMLLMPGKIESCGMLQMFAMSY- 404 (489)
T ss_pred EeC-----CC--HHHHHHHHHHHHHCC------C--CE-EEEEecCHHHHHHHHHhCCEEEeCCCCCCchHHHHHHHhC-
Confidence 884 22 124455666655431 1 13 3456788999999999999999999999999999999999
Q ss_pred cCCcccccccCCCCCCCCCccEEecccccCcccCC-------CceEeCCCCHHHHHHHHHHHhCCC-HHHHHHHHHHHhh
Q 002955 456 QGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS-------GAIRVNPWNIDAVAEAMDSALGVS-DAEKQMRHEKHYR 527 (863)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~-------~al~VnP~d~~~~A~ai~~aL~m~-~~er~~r~~~~~~ 527 (863)
+.|+|++..+|+.+.+. .|++++|.|++++|++|.+++.+- ..++..++.+ ..
T Consensus 405 ------------------G~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~-~~ 465 (489)
T PRK14098 405 ------------------GTIPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGEALALYHDEERWEELVL-EA 465 (489)
T ss_pred ------------------CCCeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHH-HH
Confidence 56789999999887762 489999999999999999987431 1122221111 11
Q ss_pred hhccCCHHHHHHHHHHHHHHH
Q 002955 528 YVSTHDVAYWARSFLQDLERA 548 (863)
Q Consensus 528 ~v~~~~~~~W~~~~l~~l~~~ 548 (863)
....+++..-++++++-.+++
T Consensus 466 ~~~~fsw~~~a~~y~~lY~~~ 486 (489)
T PRK14098 466 MERDFSWKNSAEEYAQLYREL 486 (489)
T ss_pred hcCCCChHHHHHHHHHHHHHH
Confidence 235688888888887666554
No 37
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.89 E-value=1.4e-22 Score=217.05 Aligned_cols=217 Identities=20% Similarity=0.305 Sum_probs=145.0
Q ss_pred eeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC-CceEEccCcEEEEeCC-ceeE
Q 002955 594 AILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPNY-GVDW 671 (863)
Q Consensus 594 lI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~-~l~liaenGa~I~~~~-~~~w 671 (863)
+|++||||||++ .++.++++++++|++| ++.|+.|++||||+...+.+.+..+. ..++|+.||+.|...+ ...+
T Consensus 1 li~~DlDGTLl~---~~~~i~~~~~~~i~~l-~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~ 76 (256)
T TIGR00099 1 LIFIDLDGTLLN---DDHTISPSTKEALAKL-REKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILY 76 (256)
T ss_pred CEEEeCCCCCCC---CCCccCHHHHHHHHHH-HHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEe
Confidence 689999999999 6778999999999998 88899999999999999999988763 3479999999998764 3444
Q ss_pred EeecCCCCccHHHHHHHHHHHHhhcC--------CCceeeeccce-eEee----ccc---C-C-----CC-c-------c
Q 002955 672 ETCVSVPDFSWKQIAEPVMKLYTETT--------DGSTIETKESA-LVWN----FQY---A-D-----PD-F-------G 721 (863)
Q Consensus 672 ~~~~~~~~~~w~~~v~~i~~~y~~~~--------~gs~ie~k~~~-l~~~----y~~---~-d-----~~-~-------~ 721 (863)
...++. +.+..+++.+.+.. .+.++...... +... +.. . + .+ . .
T Consensus 77 ~~~i~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (256)
T TIGR00099 77 KKPLDL------DLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLD 150 (256)
T ss_pred ecCCCH------HHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECC
Confidence 444332 23333433332211 11121111000 0000 000 0 0 00 0 0
Q ss_pred hhhHHHHHHHHHH-HhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhc
Q 002955 722 SCQAKELLDHLES-VLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAA 800 (863)
Q Consensus 722 ~~~a~el~~~L~~-~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~ 800 (863)
.....++.+.+.+ .+......+.++..++||.|+++|||.|++++++++ |++++++++|||+.||++||+.++.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~leI~~~~~~K~~~i~~~~~~~---~~~~~~~~~~GD~~nD~~m~~~~~~~- 226 (256)
T TIGR00099 151 PEDLDLLIEALNKLELEENVSVVSSGPYSIEITAKGVSKGSALQSLAEAL---GISLEDVIAFGDGMNDIEMLEAAGYG- 226 (256)
T ss_pred HHHHHHHHHHhhhhhhcCCEEEEEecCceEEecCCCCChHHHHHHHHHHc---CCCHHHEEEeCCcHHhHHHHHhCCce-
Confidence 1122233333332 222222345678889999999999999999999999 99999999999999999999999874
Q ss_pred CCCCCCCCcceEEEEeCCC----ccccceecC--CHhHHHHHH
Q 002955 801 AGPSLSPVAEVFACTVGQK----PSKAKYYLD--DTAEILRML 837 (863)
Q Consensus 801 ~~~~~~~~~~~~av~vG~~----~s~A~y~l~--d~~eV~~~L 837 (863)
+++|+. +..|+|++. +.++|.++|
T Consensus 227 -------------~a~~na~~~~k~~a~~~~~~n~~dGV~~~l 256 (256)
T TIGR00099 227 -------------VAMGNADEELKALADYVTDSNNEDGVALAL 256 (256)
T ss_pred -------------eEecCchHHHHHhCCEEecCCCCcchhhhC
Confidence 445543 467888874 456777653
No 38
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.89 E-value=1.4e-22 Score=212.54 Aligned_cols=210 Identities=21% Similarity=0.205 Sum_probs=141.5
Q ss_pred eEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC-CceEEccCcEEEEeCCc--eeE
Q 002955 595 ILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPNYG--VDW 671 (863)
Q Consensus 595 I~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~-~l~liaenGa~I~~~~~--~~w 671 (863)
|++|+||||++ .++.+++++.++|++| +++|+.|++||||+...+.+++..+. ..+++++||+.|...+. ..|
T Consensus 1 i~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~ 76 (225)
T TIGR01482 1 IASDIDGTLTD---PNRAINESALEAIRKA-ESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIF 76 (225)
T ss_pred CeEeccCccCC---CCcccCHHHHHHHHHH-HHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEE
Confidence 68999999998 6778999999999998 89999999999999999998887774 56799999999988653 345
Q ss_pred EeecCCCCccHHHHHH-HHHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcCCCeEEEECCcEE
Q 002955 672 ETCVSVPDFSWKQIAE-PVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIV 750 (863)
Q Consensus 672 ~~~~~~~~~~w~~~v~-~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~v 750 (863)
...+. ..|..... .....+.. ..-.+ . ............+ ...+.++++ .+.. .+.+.++..++
T Consensus 77 ~~~~~---~~~~~~~~~~~~~~~~~-~~~~~-~-~~~~~~~~~~~~~----~~~~~~~~~----~~~~-~~~~~~~~~~~ 141 (225)
T TIGR01482 77 LAYLE---EEWFLDIVIAKTFPFSR-LKVQY-P-RRASLVKMRYGID----VDTVREIIK----ELGL-NLVAVDSGFDI 141 (225)
T ss_pred ecccC---HHHHHHHHHhcccchhh-hcccc-c-cccceEEEeecCC----HHHHHHHHH----hcCc-eEEEecCCcEE
Confidence 44322 22322111 11000000 00000 0 0000000000001 111222222 2221 13333566799
Q ss_pred EEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC----cccccee
Q 002955 751 EVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYY 826 (863)
Q Consensus 751 EI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~ 826 (863)
||.|+++|||.+++++++++ |++++++++|||+.||++||+.+|.+ ++||+. +..|+|+
T Consensus 142 ei~~~~~~K~~~i~~l~~~~---~i~~~~~i~~GD~~NDi~m~~~ag~~--------------vam~Na~~~~k~~A~~v 204 (225)
T TIGR01482 142 HILPQGVNKGVAVKKLKEKL---GIKPGETLVCGDSENDIDLFEVPGFG--------------VAVANAQPELKEWADYV 204 (225)
T ss_pred EEeeCCCCHHHHHHHHHHHh---CCCHHHEEEECCCHhhHHHHHhcCce--------------EEcCChhHHHHHhcCee
Confidence 99999999999999999999 99999999999999999999999975 455543 5788998
Q ss_pred cC--CHhH----HHHHHHHH
Q 002955 827 LD--DTAE----ILRMLLGL 840 (863)
Q Consensus 827 l~--d~~e----V~~~L~~L 840 (863)
+. +.++ |.+.|+++
T Consensus 205 t~~~~~~G~~~~v~~~l~~~ 224 (225)
T TIGR01482 205 TESPYGEGGAEAIGEILQAI 224 (225)
T ss_pred cCCCCCCcHHHHHHHHHHhh
Confidence 74 5667 88888764
No 39
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.89 E-value=2.3e-22 Score=209.74 Aligned_cols=207 Identities=18% Similarity=0.226 Sum_probs=139.7
Q ss_pred cceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC-CceEEccCcEEEEeCCcee
Q 002955 592 NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPNYGVD 670 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~-~l~liaenGa~I~~~~~~~ 670 (863)
+|+|++|+||||++ .++.+++++.++|++| +++|+.|+++|||+...+.+++..+. ..+++++||++|...+...
T Consensus 1 ik~v~~DlDGTLl~---~~~~i~~~~~~~i~~l-~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~ 76 (215)
T TIGR01487 1 IKLVAIDIDGTLTE---PNRMISERAIEAIRKA-EKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDI 76 (215)
T ss_pred CcEEEEecCCCcCC---CCcccCHHHHHHHHHH-HHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcE
Confidence 47999999999998 6788999999999999 88999999999999999999887774 3478999999999865432
Q ss_pred EEeecCCCCccHHH-HHHHHHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcCCCeEEEECCcE
Q 002955 671 WETCVSVPDFSWKQ-IAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNI 749 (863)
Q Consensus 671 w~~~~~~~~~~w~~-~v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~ 749 (863)
... .. ...|.. .... ..+....-.. ........+.. .. ....++...+ ......+..+..+
T Consensus 77 ~~~--~~-~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~--~~-----~~~~~~~~~l----~~~~~~~~~~~~~ 138 (215)
T TIGR01487 77 FLA--NM-EEEWFLDEEKK--KRFPRDRLSN--EYPRASLVIMR--EG-----KDVDEVREII----KERGLNLVDSGFA 138 (215)
T ss_pred EEe--cc-cchhhHHHhhh--hhhhhhhccc--ccceeEEEEec--CC-----ccHHHHHHHH----HhCCeEEEecCce
Confidence 111 11 111111 0000 0010000000 00000011110 00 0112222233 2334455555678
Q ss_pred EEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC----ccccce
Q 002955 750 VEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKY 825 (863)
Q Consensus 750 vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y 825 (863)
+||.|.+++||.+++++++++ |++++++++|||+.||++||+.++.+ ++||+. +..|+|
T Consensus 139 ~ei~~~~~~K~~~i~~l~~~~---~i~~~~~i~iGDs~ND~~ml~~ag~~--------------vam~na~~~~k~~A~~ 201 (215)
T TIGR01487 139 IHIMKKGVDKGVGVEKLKELL---GIKPEEVAAIGDSENDIDLFRVVGFK--------------VAVANADDQLKEIADY 201 (215)
T ss_pred EEEecCCCChHHHHHHHHHHh---CCCHHHEEEECCCHHHHHHHHhCCCe--------------EEcCCccHHHHHhCCE
Confidence 999999999999999999999 99999999999999999999999975 445542 577899
Q ss_pred ecC--CHhHHHHHH
Q 002955 826 YLD--DTAEILRML 837 (863)
Q Consensus 826 ~l~--d~~eV~~~L 837 (863)
++. +.++|.++|
T Consensus 202 v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 202 VTSNPYGEGVVEVL 215 (215)
T ss_pred EcCCCCCchhhhhC
Confidence 874 556777653
No 40
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=99.89 E-value=1.1e-21 Score=228.90 Aligned_cols=291 Identities=17% Similarity=0.209 Sum_probs=197.1
Q ss_pred CEEEEeCcccchHHHHHHhhCC--CCeEEEEEeCCCC----ChhHhhcCCChH--------------H-HHHHHHhCCEe
Q 002955 201 DFVWVHDYHLMVLPTFLRKRFN--RVKLGFFLHSPFP----SSEIYRTLPIRD--------------E-LLRALLNADLI 259 (863)
Q Consensus 201 D~VwvhDyhl~llp~~lr~~~~--~~~i~~flH~PfP----~~e~~r~lp~r~--------------e-il~~ll~~dli 259 (863)
|+|++||+|..++|.++++... ++|+.++.|...+ +.+.+..++... . +..++..||.|
T Consensus 130 DiiH~hdw~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v 209 (473)
T TIGR02095 130 DVVHAHDWHTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADRV 209 (473)
T ss_pred CEEEECCcHHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHHhCCcC
Confidence 9999999999999999988765 3899999997642 122222221110 1 22345666766
Q ss_pred cccCHHHHHHHHHHHHhhhCceecccCceeeEE--EcCeEEEEEEeccccCchHHHhhcCCc-----------hHHHHHH
Q 002955 260 GFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLE--YFGRTVSIKILPVGIHIGQLQSVLNLP-----------ETEAKVA 326 (863)
Q Consensus 260 gF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~--~~gr~~~i~v~p~GId~~~~~~~~~~~-----------~~~~~~~ 326 (863)
-.-++.|++..... ..|. +++ +..+..++.++|+|||.+.|.+..... .......
T Consensus 210 ~tVS~~~~~ei~~~---~~~~---------~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~ 277 (473)
T TIGR02095 210 TTVSPTYAREILTP---EFGY---------GLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKE 277 (473)
T ss_pred eecCHhHHHHhcCC---cCCc---------cchhHHHhcCCCeEEEeCCCCccccCCCCCcccccCcCccchhhhhhhHH
Confidence 66666665544321 0000 010 011345678899999999886421100 0112234
Q ss_pred HHHHHhC-----CCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHH
Q 002955 327 ELQDQFK-----GQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRI 401 (863)
Q Consensus 327 ~l~~~~~-----~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~I 401 (863)
.+++++. ++++|++|||+.+.||+..+++|++++.++. +.|+.+|.. + .++++++.+++.+.
T Consensus 278 ~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~G~g-----~--~~~~~~l~~~~~~~ 344 (473)
T TIGR02095 278 ALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLELG------GQLVVLGTG-----D--PELEEALRELAERY 344 (473)
T ss_pred HHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHHcC------cEEEEECCC-----C--HHHHHHHHHHHHHC
Confidence 5666662 6789999999999999999999999987642 448888742 1 23455666665443
Q ss_pred hhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecc
Q 002955 402 NKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSE 481 (863)
Q Consensus 402 N~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe 481 (863)
+. .+.++ ...+.+++..+|+.||++|+||..||||++.+|||+| +.|+|+|.
T Consensus 345 ----~~----~v~~~-~~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~-------------------G~pvI~s~ 396 (473)
T TIGR02095 345 ----PG----NVRVI-IGYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRY-------------------GTVPIVRR 396 (473)
T ss_pred ----CC----cEEEE-EcCCHHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHC-------------------CCCeEEcc
Confidence 21 13333 4567888899999999999999999999999999999 56799999
Q ss_pred cccCcccCC---------CceEeCCCCHHHHHHHHHHHhCC---CHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHH
Q 002955 482 FVGCSPSLS---------GAIRVNPWNIDAVAEAMDSALGV---SDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLE 546 (863)
Q Consensus 482 ~~G~~~~l~---------~al~VnP~d~~~~A~ai~~aL~m---~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 546 (863)
.+|..+.+. .|++++|.|++++|++|.+++.+ .++.++...++.. ...+++...++++++-.+
T Consensus 397 ~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~Y~ 471 (473)
T TIGR02095 397 TGGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEALQKNAM--SQDFSWDKSAKQYVELYR 471 (473)
T ss_pred CCCccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCCcHHHHHHHHHHHH
Confidence 999998882 37999999999999999999873 2222222222221 246888888887776544
No 41
>PRK14099 glycogen synthase; Provisional
Probab=99.89 E-value=1.9e-21 Score=226.26 Aligned_cols=298 Identities=18% Similarity=0.187 Sum_probs=190.3
Q ss_pred cCCCCCEEEEeCcccchHHHHHHhh-CCCCeEEEEEeCC-----CCChhHhhc--CCCh-------------HHHHHHHH
Q 002955 196 ISPDDDFVWVHDYHLMVLPTFLRKR-FNRVKLGFFLHSP-----FPSSEIYRT--LPIR-------------DELLRALL 254 (863)
Q Consensus 196 ~~p~~D~VwvhDyhl~llp~~lr~~-~~~~~i~~flH~P-----fP~~e~~r~--lp~r-------------~eil~~ll 254 (863)
++| |+|++||||-.++|.+|+.+ ..++++.++.|.. ||. ..+.. +|.. .-+..++.
T Consensus 132 ~~p--DIiH~Hdw~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~ 208 (485)
T PRK14099 132 FVP--DIVHAHDWQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPR-ELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQ 208 (485)
T ss_pred CCC--CEEEECCcHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCH-HHHHHcCCChHHcCchhhhhCCCccHHHHHHH
Confidence 455 99999999999999999753 3467899999964 221 11111 1110 01233455
Q ss_pred hCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCC-------ch----HHH
Q 002955 255 NADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNL-------PE----TEA 323 (863)
Q Consensus 255 ~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~-------~~----~~~ 323 (863)
.||.|---++.|++...+.-. -.|++. .+..+..++.++|+|||.+.|.+.... .+ ...
T Consensus 209 ~ad~vitVS~~~a~ei~~~~~-g~gl~~---------~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~ 278 (485)
T PRK14099 209 LADRITTVSPTYALEIQGPEA-GMGLDG---------LLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAA 278 (485)
T ss_pred hcCeeeecChhHHHHHhcccC-CcChHH---------HHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHH
Confidence 566555445555443321000 000000 001134568889999999988643210 00 011
Q ss_pred HHHHHHHHhC-----CCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHH
Q 002955 324 KVAELQDQFK-----GQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATV 398 (863)
Q Consensus 324 ~~~~l~~~~~-----~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~ 398 (863)
..+.+++++. +..+|++|+|+++.||+..+++|+.+++++ + +.|+++|. |+ .++++++++++
T Consensus 279 ~k~~l~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~--~----~~lvivG~-----G~--~~~~~~l~~l~ 345 (485)
T PRK14099 279 NKAALQARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLGE--G----AQLALLGS-----GD--AELEARFRAAA 345 (485)
T ss_pred hHHHHHHHcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHhc--C----cEEEEEec-----CC--HHHHHHHHHHH
Confidence 2345666651 356888899999999999999999998753 3 34888874 22 23445555555
Q ss_pred HHHhhccCCCCcccEEEEcCCCCHHHHHHHH-HhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccE
Q 002955 399 RRINKIFGRPGYQPVVLIDTPLQFYERIAYY-VIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSML 477 (863)
Q Consensus 399 ~~IN~~~g~~~~~pv~~~~~~v~~~el~aly-~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~l 477 (863)
.+. + ..++++.|. .+++..+| +.||+||+||.+|||||+.+|||+| +.++
T Consensus 346 ~~~----~----~~v~~~~G~--~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~-------------------G~pp 396 (485)
T PRK14099 346 QAY----P----GQIGVVIGY--DEALAHLIQAGADALLVPSRFEPCGLTQLCALRY-------------------GAVP 396 (485)
T ss_pred HHC----C----CCEEEEeCC--CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHC-------------------CCCc
Confidence 442 2 124455564 67888877 5699999999999999999999999 4568
Q ss_pred EecccccCcccC-C-----------CceEeCCCCHHHHHHHHHHHhC--CCHHHHHHHHHHHhhhhccCCHHHHHHHHHH
Q 002955 478 VVSEFVGCSPSL-S-----------GAIRVNPWNIDAVAEAMDSALG--VSDAEKQMRHEKHYRYVSTHDVAYWARSFLQ 543 (863)
Q Consensus 478 VlSe~~G~~~~l-~-----------~al~VnP~d~~~~A~ai~~aL~--m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~ 543 (863)
|+|..+|..+.+ . .|++|+|.|++++|++|.+++. ..++.++...++.+ ...+++..-++++++
T Consensus 397 Vvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~ai~~a~~l~~d~~~~~~l~~~~~--~~~fSw~~~a~~y~~ 474 (485)
T PRK14099 397 VVARVGGLADTVVDANEMAIATGVATGVQFSPVTADALAAALRKTAALFADPVAWRRLQRNGM--TTDVSWRNPAQHYAA 474 (485)
T ss_pred EEeCCCCccceeecccccccccCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHhh--hhcCChHHHHHHHHH
Confidence 889998988866 2 4899999999999999998532 12233322222222 356888888888877
Q ss_pred HHHHHHH
Q 002955 544 DLERACR 550 (863)
Q Consensus 544 ~l~~~~~ 550 (863)
-.+++..
T Consensus 475 lY~~l~~ 481 (485)
T PRK14099 475 LYRSLVA 481 (485)
T ss_pred HHHHHHh
Confidence 6666543
No 42
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=99.89 E-value=7.5e-21 Score=216.94 Aligned_cols=287 Identities=17% Similarity=0.183 Sum_probs=206.7
Q ss_pred CCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhc---CCC--hHHHH--HHHHhCCEecccCHHHHHHHHH
Q 002955 200 DDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRT---LPI--RDELL--RALLNADLIGFHTFDYARHFLS 272 (863)
Q Consensus 200 ~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~---lp~--r~eil--~~ll~~dligF~t~~~~~~Fl~ 272 (863)
.|+|++|++...+++.++++. .++|+.+.+|..++-...+.. .|. ...++ ..+-.+|.+.+.+...++.+..
T Consensus 102 ~Diih~h~~~~~~~~~~~~~~-~~~p~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~~ 180 (405)
T TIGR03449 102 YDLIHSHYWLSGQVGWLLRDR-WGVPLVHTAHTLAAVKNAALADGDTPEPEARRIGEQQLVDNADRLIANTDEEARDLVR 180 (405)
T ss_pred CCeEEechHHHHHHHHHHHHh-cCCCEEEeccchHHHHHHhccCCCCCchHHHHHHHHHHHHhcCeEEECCHHHHHHHHH
Confidence 399999987666666666554 468899999975432221111 111 11222 2345789999999888877664
Q ss_pred HHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh---CCCeEEEeecCcccccC
Q 002955 273 CCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMDIFKG 349 (863)
Q Consensus 273 ~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~~KG 349 (863)
. .+ ....++.++|+|||.+.|... + ....++++ .++++|+++||+.+.||
T Consensus 181 ~----~~---------------~~~~ki~vi~ngvd~~~~~~~---~-----~~~~~~~~~~~~~~~~i~~~G~l~~~K~ 233 (405)
T TIGR03449 181 H----YD---------------ADPDRIDVVAPGADLERFRPG---D-----RATERARLGLPLDTKVVAFVGRIQPLKA 233 (405)
T ss_pred H----cC---------------CChhhEEEECCCcCHHHcCCC---c-----HHHHHHhcCCCCCCcEEEEecCCCcccC
Confidence 2 11 122456789999999887532 1 11233444 46789999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCc-hhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHH
Q 002955 350 ISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRG-RDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAY 428 (863)
Q Consensus 350 i~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~-~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~al 428 (863)
+..+++|++++++++|+. ++.|+++|.+. .++ +..+ ++++++++. +....+.+.|.++.+++..+
T Consensus 234 ~~~li~a~~~l~~~~~~~--~~~l~ivG~~~-~~g~~~~~----~l~~~~~~~-------~l~~~v~~~g~~~~~~~~~~ 299 (405)
T TIGR03449 234 PDVLLRAVAELLDRDPDR--NLRVIVVGGPS-GSGLATPD----ALIELAAEL-------GIADRVRFLPPRPPEELVHV 299 (405)
T ss_pred HHHHHHHHHHHHhhCCCc--ceEEEEEeCCC-CCcchHHH----HHHHHHHHc-------CCCceEEECCCCCHHHHHHH
Confidence 999999999999998872 46689888643 223 2323 334444443 23334567789999999999
Q ss_pred HHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC---CceEeCCCCHHHHHH
Q 002955 429 YVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAE 505 (863)
Q Consensus 429 y~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al~VnP~d~~~~A~ 505 (863)
|+.||+|++||..||||++++|||+| +.|+|+|..+|..+.+. .|++++|.|++++|+
T Consensus 300 l~~ad~~v~ps~~E~~g~~~lEAma~-------------------G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~ 360 (405)
T TIGR03449 300 YRAADVVAVPSYNESFGLVAMEAQAC-------------------GTPVVAARVGGLPVAVADGETGLLVDGHDPADWAD 360 (405)
T ss_pred HHhCCEEEECCCCCCcChHHHHHHHc-------------------CCCEEEecCCCcHhhhccCCceEECCCCCHHHHHH
Confidence 99999999999999999999999999 56799999988887773 389999999999999
Q ss_pred HHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHH
Q 002955 506 AMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLERA 548 (863)
Q Consensus 506 ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 548 (863)
+|.++++.+ +.+....+..++.+..+++...++++++-+.++
T Consensus 361 ~i~~~l~~~-~~~~~~~~~~~~~~~~fsw~~~~~~~~~~y~~~ 402 (405)
T TIGR03449 361 ALARLLDDP-RTRIRMGAAAVEHAAGFSWAATADGLLSSYRDA 402 (405)
T ss_pred HHHHHHhCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 999999754 444455555667777889999998888766653
No 43
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=99.88 E-value=3.7e-22 Score=212.93 Aligned_cols=220 Identities=17% Similarity=0.235 Sum_probs=145.8
Q ss_pred ceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC---CceEEccCcEEEEeCCce
Q 002955 593 RAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE---GLGIAAEHGYFVRPNYGV 669 (863)
Q Consensus 593 rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~---~l~liaenGa~I~~~~~~ 669 (863)
.+|++||||||+++...+...++++.++++++ .++|+.|++||||+...++++...++ .-.+|++||+.|+.++..
T Consensus 2 ~li~tDlDGTLl~~~~~~~~~~~~~~~~i~~~-~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~ 80 (249)
T TIGR01485 2 LLLVSDLDNTLVDHTDGDNQALLRLNALLEDH-RGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAE 80 (249)
T ss_pred eEEEEcCCCcCcCCCCCChHHHHHHHHHHHHh-hccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCC
Confidence 48999999999974334577889999999998 88999999999999999999976541 223788999999876421
Q ss_pred ----eEEeecCCCCccHH-HHHHHHHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcCCC---e
Q 002955 670 ----DWETCVSVPDFSWK-QIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEP---V 741 (863)
Q Consensus 670 ----~w~~~~~~~~~~w~-~~v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~---~ 741 (863)
.|.... ...|. +.+..+...|....+......+...+.+.+.. ..+.++++.+.+.+...+ .
T Consensus 81 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~-------~~~~~~~~~l~~~l~~~~~~~~ 150 (249)
T TIGR01485 81 VPDQHWAEYL---SEKWQRDIVVAITDKFEELKPQPDLEQRPHKVSFFLDP-------EAAPEVIKQLTEMLKETGLDVK 150 (249)
T ss_pred cCCHHHHHHH---hcccCHHHHHHHHhcCcccccCCccccCCeeEEEEech-------hhhhHHHHHHHHHHHhcCCCEE
Confidence 111100 01122 11222223332222222223333444443221 122234455555444322 3
Q ss_pred EEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHh-hhhcCCCCCCCCcceEEEEeCCCc
Q 002955 742 SVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVI-KSAAAGPSLSPVAEVFACTVGQKP 820 (863)
Q Consensus 742 ~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~a-g~~~~~~~~~~~~~~~av~vG~~~ 820 (863)
.+.++..++||+|+++|||.|++++++++ |++++++++|||+.||++||+.+ +. +++|++..
T Consensus 151 ~~~~~~~~ldi~~~~~~K~~al~~l~~~~---~i~~~~~i~~GD~~ND~~ml~~~~~~--------------~va~~na~ 213 (249)
T TIGR01485 151 LIYSSGKDLDILPQGSGKGQALQYLLQKL---AMEPSQTLVCGDSGNDIELFEIGSVR--------------GVIVSNAQ 213 (249)
T ss_pred EEEECCceEEEEeCCCChHHHHHHHHHHc---CCCccCEEEEECChhHHHHHHccCCc--------------EEEECCCH
Confidence 45678899999999999999999999999 99999999999999999999984 44 45555531
Q ss_pred ----cc-------cceecC--CHhHHHHHHHHH
Q 002955 821 ----SK-------AKYYLD--DTAEILRMLLGL 840 (863)
Q Consensus 821 ----s~-------A~y~l~--d~~eV~~~L~~L 840 (863)
.. ..|+.+ ..+++++.|+++
T Consensus 214 ~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~~~ 246 (249)
T TIGR01485 214 EELLQWYDENAKDKIYHASERCAGGIIEAIAHF 246 (249)
T ss_pred HHHHHHHHhcccCcEEEecCCCcHHHHHHHHHc
Confidence 11 225554 368888888765
No 44
>PTZ00174 phosphomannomutase; Provisional
Probab=99.88 E-value=1.4e-21 Score=208.13 Aligned_cols=199 Identities=16% Similarity=0.157 Sum_probs=129.2
Q ss_pred hcccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc--CC-ceEEccCcEEEEe
Q 002955 589 RTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC--EG-LGIAAEHGYFVRP 665 (863)
Q Consensus 589 ~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l--~~-l~liaenGa~I~~ 665 (863)
.|++|+|++||||||++ +++.++++++++|+++ +++|+.|+|||||+...+.+.++.. .. ..+|+.||+.|+.
T Consensus 2 ~~~~klia~DlDGTLL~---~~~~is~~~~~ai~~l-~~~Gi~~viaTGR~~~~i~~~l~~~~~~~~~~~I~~NGa~I~~ 77 (247)
T PTZ00174 2 EMKKTILLFDVDGTLTK---PRNPITQEMKDTLAKL-KSKGFKIGVVGGSDYPKIKEQLGEDVLEDFDYVFSENGLVAYK 77 (247)
T ss_pred CCCCeEEEEECcCCCcC---CCCCCCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHhhhhhcccCeEEeCCceEEEE
Confidence 47789999999999999 7889999999999998 8899999999999999998888632 22 3578999999997
Q ss_pred CCceeEEeecCC-CCccHHHHHHHHHHHH-----hhcCCCceeeeccceeEeecc-cCC-----CCc----c-hhhHHHH
Q 002955 666 NYGVDWETCVSV-PDFSWKQIAEPVMKLY-----TETTDGSTIETKESALVWNFQ-YAD-----PDF----G-SCQAKEL 728 (863)
Q Consensus 666 ~~~~~w~~~~~~-~~~~w~~~v~~i~~~y-----~~~~~gs~ie~k~~~l~~~y~-~~d-----~~~----~-~~~a~el 728 (863)
.+...+...+.. .+.++...+....+.+ .....+.+.+.........+. ... ..+ . .....++
T Consensus 78 ~~~~i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (247)
T PTZ00174 78 DGELFHSQSILKFLGEEKLKKFINFCLRYIADLDIPVKRGTFIEYRNGMINISPIGRNCSQEERDEFEKYDKEHHIREKF 157 (247)
T ss_pred CCeEEEEEcchhcCCHHHHHHHHHHHHHHHHhcCCccceeeeEEcCCceEEeccccccCCHHHHHHHHhcCCcchHHHHH
Confidence 654444443221 1222222222222111 111123333322111111110 000 000 0 1122345
Q ss_pred HHHHHHHhcCCCeEEEE-CCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeC----CcchHHHHHHhhh
Q 002955 729 LDHLESVLANEPVSVKS-GPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGD----DRSDEDMFEVIKS 798 (863)
Q Consensus 729 ~~~L~~~l~~~~~~v~~-g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD----~~ND~~Mf~~ag~ 798 (863)
.+.+.+.+.+..+.... +..++||.|+|+|||.|+++|+++ +++|++||| +.||++||+.++.
T Consensus 158 ~~~l~~~~~~~~~~~s~~~~~~leI~~~gvsKg~al~~L~~~-------~~eviafGD~~~~~~NDieMl~~~~~ 225 (247)
T PTZ00174 158 IQDLKKEFSDLGLKFSIGGQISFDVFPKGWDKTYCLRHLEND-------FKEIHFFGDKTFEGGNDYEIYNDPRT 225 (247)
T ss_pred HHHHHHhcCCCCeEEEecCceEEEeeeCCCcHHHHHHHHHhh-------hhhEEEEcccCCCCCCcHhhhhcCCC
Confidence 55665555443334333 457999999999999999999986 489999999 9999999998754
No 45
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=99.88 E-value=2.6e-21 Score=220.43 Aligned_cols=302 Identities=16% Similarity=0.166 Sum_probs=200.1
Q ss_pred HHHHHHHHHHHHHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCC--hhH-hh-cCCCh--------HH
Q 002955 181 YVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPS--SEI-YR-TLPIR--------DE 248 (863)
Q Consensus 181 Y~~vN~~fa~~i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~--~e~-~r-~lp~r--------~e 248 (863)
...+-+.......+.++| |+|+.| +.+....+|++.+|++++..++|..+-. .+. |. ..+.+ ..
T Consensus 71 ~~~~~~~~~~~~~~~~~p--dvi~~h--~~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (396)
T cd03818 71 GQAVARALLALRAKGFRP--DVIVAH--PGWGETLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLDDALRLRNR 146 (396)
T ss_pred HHHHHHHHHHHHhcCCCC--CEEEEC--CccchhhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchhHHHHHHHh
Confidence 334433333333344566 999999 5667777899999999998887744311 110 10 11111 11
Q ss_pred ---HHHHHHhCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHH
Q 002955 249 ---LLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKV 325 (863)
Q Consensus 249 ---il~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~ 325 (863)
+...+-.||.+-..+......|.. ... .++.++|+|||.+.|.... .. .
T Consensus 147 ~~~~~~~~~~ad~vi~~s~~~~~~~~~--------------------~~~--~ki~vI~ngvd~~~f~~~~---~~---~ 198 (396)
T cd03818 147 NALILLALAQADAGVSPTRWQRSTFPA--------------------ELR--SRISVIHDGIDTDRLRPDP---QA---R 198 (396)
T ss_pred hhHhHHHHHhCCEEECCCHHHHhhCcH--------------------hhc--cceEEeCCCccccccCCCc---hh---h
Confidence 234566677776665543333221 011 3577899999998886321 11 1
Q ss_pred HHHHHHh---CCCeEEEeecC-cccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHH
Q 002955 326 AELQDQF---KGQIVMLGVDD-MDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRI 401 (863)
Q Consensus 326 ~~l~~~~---~~~~vil~Vdr-ld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~I 401 (863)
..++... .++++|++++| +.+.||+..+++|+.++.+++|+++ |+++|......+...+......+++.+++
T Consensus 199 ~~~~~~~~~~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~----lvivG~~~~~~g~~~~~~~~~~~~~~~~~ 274 (396)
T cd03818 199 LRLPNGRVLTPGDEVITFVARNLEPYRGFHVFMRALPRLLRARPDAR----VVIVGGDGVSYGAPPPDGESWKQHMLDEL 274 (396)
T ss_pred hcccccccCCCCCeEEEEECCCcccccCHHHHHHHHHHHHHHCCCcE----EEEEcCCCcccCCCCCCcccHHHHHHHHh
Confidence 1111111 46789999998 9999999999999999999999877 88888532111110000001111222333
Q ss_pred hhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecc
Q 002955 402 NKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSE 481 (863)
Q Consensus 402 N~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe 481 (863)
+.+.+. +.+.+.|.++.+++.++|+.||++|+||..||+|++++||||| +.|+|+|.
T Consensus 275 ~~~~~~----~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~-------------------G~PVIas~ 331 (396)
T cd03818 275 GGRLDL----SRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMAC-------------------GCLVVGSD 331 (396)
T ss_pred hcccCc----ceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHC-------------------CCCEEEcC
Confidence 322211 2345678999999999999999999999999999999999999 56799999
Q ss_pred cccCcccCC---CceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhcc-CCHHHHHHHHH
Q 002955 482 FVGCSPSLS---GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVST-HDVAYWARSFL 542 (863)
Q Consensus 482 ~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~~l 542 (863)
.+|..+.+. .|++|+|.|++++|++|.++++.+ +++....++.++++.+ +++...+++++
T Consensus 332 ~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~~~-~~~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 332 TAPVREVITDGENGLLVDFFDPDALAAAVIELLDDP-ARRARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred CCCchhhcccCCceEEcCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 988888873 489999999999999999999865 4555556667777766 77666666554
No 46
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.88 E-value=1.9e-21 Score=208.36 Aligned_cols=227 Identities=15% Similarity=0.073 Sum_probs=146.3
Q ss_pred eeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC-CceEEccCcEEEEeCCcee--
Q 002955 594 AILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPNYGVD-- 670 (863)
Q Consensus 594 lI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~-~l~liaenGa~I~~~~~~~-- 670 (863)
+|++|+||||++ .++.+.+.++++|++| ++.|+.|+++|||+...+.+++..+. ..++|++||++|...++..
T Consensus 1 li~~DlDGTll~---~~~~~~~~~~~~i~~l-~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~ 76 (256)
T TIGR01486 1 WIFTDLDGTLLD---PHGYDWGPAKEVLERL-QELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTE 76 (256)
T ss_pred CEEEcCCCCCcC---CCCcCchHHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccC
Confidence 689999999998 4553444699999998 88899999999999999999998774 3579999999998765421
Q ss_pred ---EEeecCCCCccHHHHHHHHHHHHhhcCCCceeeeccc---------eeEee------cccCCCCcchhhHHHHHHHH
Q 002955 671 ---WETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKES---------ALVWN------FQYADPDFGSCQAKELLDHL 732 (863)
Q Consensus 671 ---w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~---------~l~~~------y~~~d~~~~~~~a~el~~~L 732 (863)
|... ...++ +.+..+++.+.+..+..+...... .+... .......+ .. ..+..+.+
T Consensus 77 ~~~~~~~---~~i~~-~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~ 150 (256)
T TIGR01486 77 PEYPVIA---LGIPY-EKIRARLEELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETI-LW-SEERRERF 150 (256)
T ss_pred CCeEEEE---cCCCH-HHHHHHHHHHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCce-ec-ChHHHHHH
Confidence 2211 11122 444455544332211110000000 00000 00000000 00 12233444
Q ss_pred HHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCC--cceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcc
Q 002955 733 ESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGML--PDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAE 810 (863)
Q Consensus 733 ~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~--~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~ 810 (863)
.+.+....+.+..+..++||.|++++||.|++++++++ |++ .+++++|||+.||++||+.+|.+++|+|+++...
T Consensus 151 ~~~~~~~~~~~~~s~~~~ei~~~~~~Kg~ai~~l~~~~---~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~ 227 (256)
T TIGR01486 151 TEALVELGLEVTHGNRFYHVLGAGSDKGKAANALKQFY---NQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNV 227 (256)
T ss_pred HHHHHHcCCEEEeCCceEEEecCCCCHHHHHHHHHHHH---hhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCcc
Confidence 44444444555556679999999999999999999999 999 9999999999999999999998765555432100
Q ss_pred eEEEEeCCCccc--cc-eec--CCHhHHHHHHHHH
Q 002955 811 VFACTVGQKPSK--AK-YYL--DDTAEILRMLLGL 840 (863)
Q Consensus 811 ~~av~vG~~~s~--A~-y~l--~d~~eV~~~L~~L 840 (863)
..+.. |. |++ ++.++|.+.|+++
T Consensus 228 -------~lk~~~~a~~~vt~~~~~dGva~~l~~~ 255 (256)
T TIGR01486 228 -------SLKPGDPGSFLLTPAPGPEGWREALEHL 255 (256)
T ss_pred -------ccCccCCCcEEEcCCCCcHHHHHHHHHh
Confidence 01232 44 766 4678999999876
No 47
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=99.88 E-value=7.7e-21 Score=216.70 Aligned_cols=281 Identities=14% Similarity=0.134 Sum_probs=195.7
Q ss_pred hhcCCCCCEEEEeCcccchH-HHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHH-HHhCCEecccCHHHHHHHH
Q 002955 194 EVISPDDDFVWVHDYHLMVL-PTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRA-LLNADLIGFHTFDYARHFL 271 (863)
Q Consensus 194 ~~~~p~~D~VwvhDyhl~ll-p~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~-ll~~dligF~t~~~~~~Fl 271 (863)
+..+| |+|++|+++..+. ...+-.+..++|+.+..|..|+..+.... +...+.+- +-.+|.+.+.+....+++.
T Consensus 85 ~~~~~--DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~h~~~~~~~~~~~--~~~~~~~~~~~~~d~ii~~s~~~~~~~~ 160 (398)
T cd03796 85 IRERI--TIVHGHQAFSALAHEALLHARTMGLKTVFTDHSLFGFADASSI--HTNKLLRFSLADVDHVICVSHTSKENTV 160 (398)
T ss_pred HhcCC--CEEEECCCCchHHHHHHHHhhhcCCcEEEEecccccccchhhH--HhhHHHHHhhccCCEEEEecHhHhhHHH
Confidence 34466 9999999875443 34443444568999999987753322110 11122222 3457888777766554443
Q ss_pred HHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCHH
Q 002955 272 SCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGIS 351 (863)
Q Consensus 272 ~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~ 351 (863)
... + ....++.++|+|+|.+.|..... . ..+++++|+++||+.+.||+.
T Consensus 161 ~~~----~---------------~~~~k~~vi~ngvd~~~f~~~~~-----~-------~~~~~~~i~~~grl~~~Kg~~ 209 (398)
T cd03796 161 LRA----S---------------LDPERVSVIPNAVDSSDFTPDPS-----K-------RDNDKITIVVISRLVYRKGID 209 (398)
T ss_pred HHh----C---------------CChhhEEEEcCccCHHHcCCCcc-----c-------CCCCceEEEEEeccchhcCHH
Confidence 210 1 12245678899999988753211 0 125678999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHh
Q 002955 352 LKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVI 431 (863)
Q Consensus 352 ~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ 431 (863)
.+++|+..+.+++|+++ |+.+|. ++..+++ .+++++. +....+.+.|.++.+++.++|+.
T Consensus 210 ~li~a~~~l~~~~~~~~----l~i~G~-----g~~~~~l----~~~~~~~-------~l~~~v~~~G~~~~~~~~~~l~~ 269 (398)
T cd03796 210 LLVGIIPEICKKHPNVR----FIIGGD-----GPKRILL----EEMREKY-------NLQDRVELLGAVPHERVRDVLVQ 269 (398)
T ss_pred HHHHHHHHHHhhCCCEE----EEEEeC-----CchHHHH----HHHHHHh-------CCCCeEEEeCCCCHHHHHHHHHh
Confidence 99999999988888876 888873 3333333 3343333 22233455688999999999999
Q ss_pred ccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC-CC-ceEeCCCCHHHHHHHHHH
Q 002955 432 AECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-SG-AIRVNPWNIDAVAEAMDS 509 (863)
Q Consensus 432 ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l-~~-al~VnP~d~~~~A~ai~~ 509 (863)
||++|+||..||||++++|||+| |.|+|+|..+|..+.+ ++ +++++| |.++++++|.+
T Consensus 270 ad~~v~pS~~E~~g~~~~EAma~-------------------G~PVI~s~~gg~~e~i~~~~~~~~~~-~~~~l~~~l~~ 329 (398)
T cd03796 270 GHIFLNTSLTEAFCIAIVEAASC-------------------GLLVVSTRVGGIPEVLPPDMILLAEP-DVESIVRKLEE 329 (398)
T ss_pred CCEEEeCChhhccCHHHHHHHHc-------------------CCCEEECCCCCchhheeCCceeecCC-CHHHHHHHHHH
Confidence 99999999999999999999999 5679999999988877 33 445554 99999999999
Q ss_pred HhCCCHHHHHHHHHHHhh-hhccCCHHHHHHHHHHHHHHHHH
Q 002955 510 ALGVSDAEKQMRHEKHYR-YVSTHDVAYWARSFLQDLERACR 550 (863)
Q Consensus 510 aL~m~~~er~~r~~~~~~-~v~~~~~~~W~~~~l~~l~~~~~ 550 (863)
++.++.+.+.. .++.++ ....+++..-++++++..+++..
T Consensus 330 ~l~~~~~~~~~-~~~~~~~~~~~fs~~~~~~~~~~~y~~l~~ 370 (398)
T cd03796 330 AISILRTGKHD-PWSFHNRVKKMYSWEDVAKRTEKVYDRILQ 370 (398)
T ss_pred HHhChhhhhhH-HHHHHHHHHhhCCHHHHHHHHHHHHHHHhc
Confidence 99876544333 334444 44568999999999888877654
No 48
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.87 E-value=4.8e-21 Score=207.14 Aligned_cols=235 Identities=14% Similarity=0.101 Sum_probs=150.0
Q ss_pred cccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC-CceEEccCcEEEEeCCc
Q 002955 590 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPNYG 668 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~-~l~liaenGa~I~~~~~ 668 (863)
+++|+|++|+||||++ .++.+++.+.++|++| ++.|+.|++||||+...+...+..+. ..++++.||++|+.++.
T Consensus 2 ~~~kli~~DlDGTLl~---~~~~~~~~~~~ai~~l-~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~~ 77 (273)
T PRK00192 2 MMKLLVFTDLDGTLLD---HHTYSYEPAKPALKAL-KEKGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPKN 77 (273)
T ss_pred CcceEEEEcCcccCcC---CCCcCcHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEeccc
Confidence 5689999999999998 5677889999999998 88999999999999999999888763 34689999999987543
Q ss_pred e-------------eEEeecCCCCccHHHHHHHHHHHHhhcCCCce--eeec---c----ceeEe---e-ccc--CCCCc
Q 002955 669 V-------------DWETCVSVPDFSWKQIAEPVMKLYTETTDGST--IETK---E----SALVW---N-FQY--ADPDF 720 (863)
Q Consensus 669 ~-------------~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~--ie~k---~----~~l~~---~-y~~--~d~~~ 720 (863)
. .|..... .+ .+.+.++++.+.......+ +... + ..+.. . ... ....+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (273)
T PRK00192 78 YFPFQPDGERLKGDYWVIELG---PP-YEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPF 153 (273)
T ss_pred ccccCCccccccCCceEEEcC---CC-HHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCce
Confidence 1 1221111 11 2333333332222100000 0000 0 00000 0 000 00000
Q ss_pred chhhHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCc-ceEEEEeCCcchHHHHHHhhhh
Q 002955 721 GSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLP-DFVLCIGDDRSDEDMFEVIKSA 799 (863)
Q Consensus 721 ~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~-d~vlaiGD~~ND~~Mf~~ag~~ 799 (863)
......+..+.+...+...++.+..++.++||.|.+ +||.|++++++++ |+++ +++++|||+.||++||+.+|.+
T Consensus 154 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~-~Kg~al~~l~~~~---~i~~~~~v~~~GDs~NDi~m~~~ag~~ 229 (273)
T PRK00192 154 LWNGSEAAKERFEEALKRLGLKVTRGGRFLHLLGGG-DKGKAVRWLKELY---RRQDGVETIALGDSPNDLPMLEAADIA 229 (273)
T ss_pred eecCchHHHHHHHHHHHHcCCEEEECCeEEEEeCCC-CHHHHHHHHHHHH---hccCCceEEEEcCChhhHHHHHhCCee
Confidence 000012233444444444456666677899999999 9999999999999 9999 9999999999999999999987
Q ss_pred cCCCCCCCCcceEEEEeCCCcccc-ceec----CCHhHHHHHHHHHHH
Q 002955 800 AAGPSLSPVAEVFACTVGQKPSKA-KYYL----DDTAEILRMLLGLAE 842 (863)
Q Consensus 800 ~~~~~~~~~~~~~av~vG~~~s~A-~y~l----~d~~eV~~~L~~L~~ 842 (863)
++|.|+++..+ -.....| +++. ++.++|.+.|+++..
T Consensus 230 vam~NA~~~~k------~~~~~~a~~~v~~~~~~~~~Gv~~~l~~~~~ 271 (273)
T PRK00192 230 VVVPGPDGPNP------PLLPGIADGEFILASAPGPEGWAEAINKLLS 271 (273)
T ss_pred EEeCCCCCCCc------ccCccccCCceEEecCCCcHHHHHHHHHHHh
Confidence 55554433211 0001333 4544 357899999998753
No 49
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=99.87 E-value=1.1e-20 Score=215.70 Aligned_cols=275 Identities=16% Similarity=0.107 Sum_probs=197.0
Q ss_pred CCEEEEeCcccchHHHHHHhh-CCCCeEEEEEeCCCCC-hhHhhcCCChHHHHHHHHhCCEecccCHHHHHHHHHHHHhh
Q 002955 200 DDFVWVHDYHLMVLPTFLRKR-FNRVKLGFFLHSPFPS-SEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRM 277 (863)
Q Consensus 200 ~D~VwvhDyhl~llp~~lr~~-~~~~~i~~flH~PfP~-~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~Fl~~~~r~ 277 (863)
-|+|+.|..+.-.+..++++. ....++.+++|-+-.. ..+.. ..+..+-+-+-.+|.|-..+....+.+.+
T Consensus 119 ~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~~~~~--~~~~~~~~~~~~ad~vv~~S~~~~~~l~~----- 191 (406)
T PRK15427 119 ADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSREVLN--HYTPEYQQLFRRGDLMLPISDLWAGRLQK----- 191 (406)
T ss_pred CCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccchhhh--hhhHHHHHHHHhCCEEEECCHHHHHHHHH-----
Confidence 399999988877777778763 2245677888954211 11110 11122333345688877666543333321
Q ss_pred hCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCHHHHHHHH
Q 002955 278 LGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAM 357 (863)
Q Consensus 278 lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~A~ 357 (863)
+|. ...++.++|+|||.+.|..... ....++..|++|||+.+.||+..+++|+
T Consensus 192 ~g~---------------~~~ki~vi~nGvd~~~f~~~~~------------~~~~~~~~il~vGrl~~~Kg~~~ll~a~ 244 (406)
T PRK15427 192 MGC---------------PPEKIAVSRMGVDMTRFSPRPV------------KAPATPLEIISVARLTEKKGLHVAIEAC 244 (406)
T ss_pred cCC---------------CHHHEEEcCCCCCHHHcCCCcc------------ccCCCCeEEEEEeCcchhcCHHHHHHHH
Confidence 121 1235677999999988852110 0113456799999999999999999999
Q ss_pred HHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceee
Q 002955 358 EQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLV 437 (863)
Q Consensus 358 ~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vv 437 (863)
.++.+++|+++ |+.+|. |+.. +++++++++. +....+.+.|.++.+|+..+|+.||+||+
T Consensus 245 ~~l~~~~~~~~----l~ivG~-----G~~~----~~l~~~~~~~-------~l~~~V~~~G~~~~~el~~~l~~aDv~v~ 304 (406)
T PRK15427 245 RQLKEQGVAFR----YRILGI-----GPWE----RRLRTLIEQY-------QLEDVVEMPGFKPSHEVKAMLDDADVFLL 304 (406)
T ss_pred HHHHhhCCCEE----EEEEEC-----chhH----HHHHHHHHHc-------CCCCeEEEeCCCCHHHHHHHHHhCCEEEE
Confidence 99988888765 888883 3433 3344444443 23346678899999999999999999999
Q ss_pred cccc------cCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC---CceEeCCCCHHHHHHHHH
Q 002955 438 TAVR------DGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAMD 508 (863)
Q Consensus 438 tS~~------EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al~VnP~d~~~~A~ai~ 508 (863)
||.. |||+++.+|||+| +.|+|+|..+|+.+.+. +|++|+|.|++++|++|.
T Consensus 305 pS~~~~~g~~Eg~p~~llEAma~-------------------G~PVI~t~~~g~~E~v~~~~~G~lv~~~d~~~la~ai~ 365 (406)
T PRK15427 305 PSVTGADGDMEGIPVALMEAMAV-------------------GIPVVSTLHSGIPELVEADKSGWLVPENDAQALAQRLA 365 (406)
T ss_pred CCccCCCCCccCccHHHHHHHhC-------------------CCCEEEeCCCCchhhhcCCCceEEeCCCCHHHHHHHHH
Confidence 9984 9999999999999 56799999999888873 489999999999999999
Q ss_pred HHhCCCHHHHHHHHHHHhhhh-ccCCHHHHHHHHHHHHHH
Q 002955 509 SALGVSDAEKQMRHEKHYRYV-STHDVAYWARSFLQDLER 547 (863)
Q Consensus 509 ~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 547 (863)
+++++++++++...++.++++ ..+++...++++.+-+++
T Consensus 366 ~l~~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 366 AFSQLDTDELAPVVKRAREKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 999966677777777777777 458888888888776553
No 50
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=99.87 E-value=4.9e-21 Score=202.61 Aligned_cols=213 Identities=16% Similarity=0.194 Sum_probs=144.2
Q ss_pred eeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC---CceEEccCcEEEEeCCcee
Q 002955 594 AILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE---GLGIAAEHGYFVRPNYGVD 670 (863)
Q Consensus 594 lI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~---~l~liaenGa~I~~~~~~~ 670 (863)
+|++||||||++ .++.+++.+ ++++ + +++|+.++++|||+...+.+.+..+. ...+|++||+.|......
T Consensus 1 li~~DlDgTLl~---~~~~~~~~~-~~~~-~-~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~nGa~i~~~~~~- 73 (236)
T TIGR02471 1 LIITDLDNTLLG---DDEGLASFV-ELLR-G-SGDAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARVGTEIYYGPEL- 73 (236)
T ss_pred CeEEeccccccC---CHHHHHHHH-HHHH-h-cCCCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECCCceEEeCCCC-
Confidence 689999999998 567777766 7776 5 78899999999999999999998762 234899999998764321
Q ss_pred EEeecCCCCccHHHHH------HHHHHHHhhcCCCceeeeccc--eeEeecccCCCCcchhhHHHHHHHHHHHhcCCCeE
Q 002955 671 WETCVSVPDFSWKQIA------EPVMKLYTETTDGSTIETKES--ALVWNFQYADPDFGSCQAKELLDHLESVLANEPVS 742 (863)
Q Consensus 671 w~~~~~~~~~~w~~~v------~~i~~~y~~~~~gs~ie~k~~--~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~~~ 742 (863)
..+..|.... ..+ ..+....++..++.+.. ...+++... ++.. ....++.+.+++. ......
T Consensus 74 ------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~-~~~~~~~~~l~~~-~~~~~~ 143 (236)
T TIGR02471 74 ------QPDRFWQKHIDHDWRRQAV-VEALADIPGLTLQDDQEQGPFKISYLLD-PEGE-PILPQIRQRLRQQ-SQAAKV 143 (236)
T ss_pred ------CCChhHHHHHhcCCCHHHH-HHHHhcCCCcEeCChhcCCCeeEEEEEC-cccc-hHHHHHHHHHHhc-cCCEEE
Confidence 0111121111 112 22333345555544432 234455432 2211 1223344444432 111123
Q ss_pred EEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC---
Q 002955 743 VKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK--- 819 (863)
Q Consensus 743 v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--- 819 (863)
+.++..++||.|+++|||.|++++++++ |++++++++|||+.||++||+.++. +++||+.
T Consensus 144 ~~~~~~~~ei~~~~~~K~~al~~l~~~~---g~~~~~~i~~GD~~nD~~ml~~~~~--------------~iav~na~~~ 206 (236)
T TIGR02471 144 ILSCGWFLDVLPLRASKGLALRYLSYRW---GLPLEQILVAGDSGNDEEMLRGLTL--------------GVVVGNHDPE 206 (236)
T ss_pred EEECCceEEEeeCCCChHHHHHHHHHHh---CCCHHHEEEEcCCccHHHHHcCCCc--------------EEEEcCCcHH
Confidence 4567789999999999999999999999 9999999999999999999999876 4556653
Q ss_pred -ccccc----eecC--CHhHHHHHHHHH
Q 002955 820 -PSKAK----YYLD--DTAEILRMLLGL 840 (863)
Q Consensus 820 -~s~A~----y~l~--d~~eV~~~L~~L 840 (863)
+..|+ |+++ +.++|.+.|+.+
T Consensus 207 ~k~~a~~~~~~v~~~~~~~Gv~~~i~~~ 234 (236)
T TIGR02471 207 LEGLRHQQRIYFANNPHAFGILEGINHY 234 (236)
T ss_pred HHHhhcCCcEEEcCCCChhHHHHHHHhh
Confidence 45677 6664 467899998764
No 51
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=99.86 E-value=2.1e-20 Score=217.48 Aligned_cols=284 Identities=16% Similarity=0.192 Sum_probs=197.0
Q ss_pred HhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChH----HHHHHH-HhCCEecccCHHHH
Q 002955 193 MEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRD----ELLRAL-LNADLIGFHTFDYA 267 (863)
Q Consensus 193 ~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~----eil~~l-l~~dligF~t~~~~ 267 (863)
++..+| |+|++|+...+.++.++-.+..++|+.+.+|.-+|..-.....++.. .+.+.+ -.+|.|...+....
T Consensus 140 i~~~kp--DiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ad~ii~~S~~~~ 217 (465)
T PLN02871 140 VARFKP--DLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHVPVYIPRYTFSWLVKPMWDIIRFLHRAADLTLVTSPALG 217 (465)
T ss_pred HHhCCC--CEEEECCCchhHHHHHHHHHHhCCCEEEEEecCchhhhhcccchhhHHHHHHHHHHHHhhCCEEEECCHHHH
Confidence 344566 99999987766666655444457889999997665431111111110 111222 24788877776665
Q ss_pred HHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh----CCCeEEEeecC
Q 002955 268 RHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF----KGQIVMLGVDD 343 (863)
Q Consensus 268 ~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~----~~~~vil~Vdr 343 (863)
+.+... +. ....++.++|+|||.+.|...... ..+++++ +++++|+++||
T Consensus 218 ~~l~~~-----~~--------------~~~~kv~vi~nGvd~~~f~p~~~~-------~~~~~~~~~~~~~~~~i~~vGr 271 (465)
T PLN02871 218 KELEAA-----GV--------------TAANRIRVWNKGVDSESFHPRFRS-------EEMRARLSGGEPEKPLIVYVGR 271 (465)
T ss_pred HHHHHc-----CC--------------CCcCeEEEeCCccCccccCCcccc-------HHHHHHhcCCCCCCeEEEEeCC
Confidence 555431 10 112356789999999888532111 1223333 36789999999
Q ss_pred cccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHH
Q 002955 344 MDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFY 423 (863)
Q Consensus 344 ld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~ 423 (863)
+.+.||+..+++|++++ |+++ |+++| +|+..++ ++++++.. +| .+.|.++.+
T Consensus 272 l~~~K~~~~li~a~~~~----~~~~----l~ivG-----~G~~~~~----l~~~~~~~----------~V-~f~G~v~~~ 323 (465)
T PLN02871 272 LGAEKNLDFLKRVMERL----PGAR----LAFVG-----DGPYREE----LEKMFAGT----------PT-VFTGMLQGD 323 (465)
T ss_pred CchhhhHHHHHHHHHhC----CCcE----EEEEe-----CChHHHH----HHHHhccC----------Ce-EEeccCCHH
Confidence 99999999999888654 6554 88887 3443333 33333211 23 566899999
Q ss_pred HHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC------CceEeCC
Q 002955 424 ERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS------GAIRVNP 497 (863)
Q Consensus 424 el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~------~al~VnP 497 (863)
|+..+|+.||+||+||..||||++++|||+| |.|+|+|..+|+.+.+. +|++++|
T Consensus 324 ev~~~~~~aDv~V~pS~~E~~g~~vlEAmA~-------------------G~PVI~s~~gg~~eiv~~~~~~~~G~lv~~ 384 (465)
T PLN02871 324 ELSQAYASGDVFVMPSESETLGFVVLEAMAS-------------------GVPVVAARAGGIPDIIPPDQEGKTGFLYTP 384 (465)
T ss_pred HHHHHHHHCCEEEECCcccccCcHHHHHHHc-------------------CCCEEEcCCCCcHhhhhcCCCCCceEEeCC
Confidence 9999999999999999999999999999999 56799999999887763 2899999
Q ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHH-HHHHHHhh
Q 002955 498 WNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQD-LERACRDH 552 (863)
Q Consensus 498 ~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~-l~~~~~~~ 552 (863)
.|++++|++|.++++. ++.++...++.++++.++++...++++++. -.++...+
T Consensus 385 ~d~~~la~~i~~ll~~-~~~~~~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~~~~ 439 (465)
T PLN02871 385 GDVDDCVEKLETLLAD-PELRERMGAAAREEVEKWDWRAATRKLRNEQYSAAIWFW 439 (465)
T ss_pred CCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999975 455555666677788889999999999874 45554443
No 52
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=99.86 E-value=6.6e-21 Score=199.53 Aligned_cols=197 Identities=18% Similarity=0.114 Sum_probs=125.6
Q ss_pred eeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC-C-ceEEccCcEEEEeCCce-e
Q 002955 594 AILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-G-LGIAAEHGYFVRPNYGV-D 670 (863)
Q Consensus 594 lI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~-~-l~liaenGa~I~~~~~~-~ 670 (863)
+|++|+||||++ .++.+++.++++|++| +++|+.|++||||+...+..++..+. . .++|++||+.|+..... .
T Consensus 1 ~i~~DlDGTLL~---~~~~~~~~~~~~l~~l-~~~gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~~ 76 (221)
T TIGR02463 1 WVFSDLDGTLLD---SHSYDWQPAAPWLTRL-QEAGIPVILCTSKTAAEVEYLQKALGLTGDPYIAENGAAIHLEELWRE 76 (221)
T ss_pred CEEEeCCCCCcC---CCCCCcHHHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCCcEEEcCccccc
Confidence 589999999998 5555666699999998 88999999999999999999998763 3 56999999999874321 1
Q ss_pred E---EeecCCCCccHHHHHHHHHHHHhhcCCCc-eeeec--------cceeEee------cccCCCCcchhhHHHHHHHH
Q 002955 671 W---ETCVSVPDFSWKQIAEPVMKLYTETTDGS-TIETK--------ESALVWN------FQYADPDFGSCQAKELLDHL 732 (863)
Q Consensus 671 w---~~~~~~~~~~w~~~v~~i~~~y~~~~~gs-~ie~k--------~~~l~~~------y~~~d~~~~~~~a~el~~~L 732 (863)
+ .... ....+ +.+.++++...+..... +.... ...+... .......+......+..+.+
T Consensus 77 ~~~~~~~~--~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (221)
T TIGR02463 77 EPGYPRII--LGISY-GIIRLVLETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVPLLWRDSDSRMPRF 153 (221)
T ss_pred CCCceEEe--cCCCH-HHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCccEEecCchhHHHHH
Confidence 1 1110 11122 22333333221110000 00000 0000000 00000000000011223333
Q ss_pred HHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhc
Q 002955 733 ESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAA 800 (863)
Q Consensus 733 ~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~ 800 (863)
.+.+....+.+..+..++||.|++++||.|++++++++ |+++++|++|||+.||++||+.+|.++
T Consensus 154 ~~~l~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~l---gi~~~~vi~~GD~~NDi~ml~~ag~~v 218 (221)
T TIGR02463 154 TALLADLGLAIVQGNRFSHVLGASSSKGKAANWLKATY---NQPDVKTLGLGDGPNDLPLLEVADYAV 218 (221)
T ss_pred HHHHHHcCCeEEecCCeeEEecCCCCHHHHHHHHHHHh---CCCCCcEEEECCCHHHHHHHHhCCceE
Confidence 34444334555567789999999999999999999999 999999999999999999999999853
No 53
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=99.86 E-value=2.9e-20 Score=216.91 Aligned_cols=310 Identities=18% Similarity=0.214 Sum_probs=203.5
Q ss_pred HHHHHHHHHHHHHHHhh-cCCCCCEEEEeCcccchHHHHHHhhC-----CCCeEEEEEeCCCCCh----hHhhcC--CC-
Q 002955 179 QAYVSVNKIFADKVMEV-ISPDDDFVWVHDYHLMVLPTFLRKRF-----NRVKLGFFLHSPFPSS----EIYRTL--PI- 245 (863)
Q Consensus 179 ~~Y~~vN~~fa~~i~~~-~~p~~D~VwvhDyhl~llp~~lr~~~-----~~~~i~~flH~PfP~~----e~~r~l--p~- 245 (863)
..|...++...+.+... .+| |+|++||+|-.++|.++++.+ .++|+.|..|.+.+.. ..+..+ ++
T Consensus 110 ~~~~~f~~~~~~~l~~~~~~p--DviH~hd~~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~ 187 (476)
T cd03791 110 ERFALFSRAALELLRRLGWKP--DIIHCHDWHTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWE 187 (476)
T ss_pred HHHHHHHHHHHHHHHhcCCCC--cEEEECchHHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCcc
Confidence 34444444444444332 344 999999999999999998874 5789999999875321 111111 11
Q ss_pred -------------hHHHHHHHHhCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEE--EcCeEEEEEEeccccCch
Q 002955 246 -------------RDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLE--YFGRTVSIKILPVGIHIG 310 (863)
Q Consensus 246 -------------r~eil~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~--~~gr~~~i~v~p~GId~~ 310 (863)
..-+..++..||.|-.-+..|++..++.- .|. +++ ...+..++.++|+|||.+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~~-----------~~~-gl~~~~~~~~~ki~~I~NGid~~ 255 (476)
T cd03791 188 ELFHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYAREILTPE-----------FGE-GLDGLLRARAGKLSGILNGIDYD 255 (476)
T ss_pred chhhhcccccCCcccHHHHHHHhcCcCeecCHhHHHHhCCCC-----------CCc-chHHHHHhccCCeEEEeCCCcCc
Confidence 01223445666766666666655443210 000 010 112335788899999999
Q ss_pred HHHhhcCCc-----------hHHHHHHHHHHHh-----CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEE
Q 002955 311 QLQSVLNLP-----------ETEAKVAELQDQF-----KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLV 374 (863)
Q Consensus 311 ~~~~~~~~~-----------~~~~~~~~l~~~~-----~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLv 374 (863)
.|.+..... ........+++++ .++++|+++||+.+.||+..+++|++++.+++ +.|+
T Consensus 256 ~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lv 329 (476)
T cd03791 256 VWNPATDPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLELG------GQLV 329 (476)
T ss_pred ccCccccchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHcC------cEEE
Confidence 886432110 1122334566665 46789999999999999999999999987653 4478
Q ss_pred EEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeee
Q 002955 375 QIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIIC 454 (863)
Q Consensus 375 qi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~ 454 (863)
.+|.. + .++.+++.+++.+.. ..++++.+ .+.++...+|+.||++++||..||||++.+|||+|
T Consensus 330 i~G~g-----~--~~~~~~~~~~~~~~~--------~~v~~~~~-~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~ 393 (476)
T cd03791 330 ILGSG-----D--PEYEEALRELAARYP--------GRVAVLIG-YDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRY 393 (476)
T ss_pred EEecC-----C--HHHHHHHHHHHHhCC--------CcEEEEEe-CCHHHHHHHHHhCCEEECCCCCCCCcHHHHHHhhC
Confidence 77742 1 234455555544431 13555554 45777789999999999999999999999999999
Q ss_pred ecCCcccccccCCCCCCCCCccEEecccccCcccC-C--------CceEeCCCCHHHHHHHHHHHhCCC--HHHHHHHHH
Q 002955 455 RQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-S--------GAIRVNPWNIDAVAEAMDSALGVS--DAEKQMRHE 523 (863)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l-~--------~al~VnP~d~~~~A~ai~~aL~m~--~~er~~r~~ 523 (863)
+.|+|+|..+|..+.+ + +|+++.|.|+++++++|.+++++. ++++....+
T Consensus 394 -------------------G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~ 454 (476)
T cd03791 394 -------------------GTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKLQR 454 (476)
T ss_pred -------------------CCCCEECcCCCccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence 5679999999999888 3 599999999999999999998643 222222222
Q ss_pred HHhhhhccCCHHHHHHHHHHHH
Q 002955 524 KHYRYVSTHDVAYWARSFLQDL 545 (863)
Q Consensus 524 ~~~~~v~~~~~~~W~~~~l~~l 545 (863)
+..+ ..+++..-++++++-.
T Consensus 455 ~~~~--~~fsw~~~a~~~~~~y 474 (476)
T cd03791 455 NAMA--QDFSWDRSAKEYLELY 474 (476)
T ss_pred HHhc--cCCChHHHHHHHHHHH
Confidence 2222 3467777777766543
No 54
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=99.85 E-value=9.8e-20 Score=206.06 Aligned_cols=284 Identities=21% Similarity=0.198 Sum_probs=199.2
Q ss_pred CEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcC-----C-ChHH-HHHHHHhCCEecccCHHHHHHHHHH
Q 002955 201 DFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTL-----P-IRDE-LLRALLNADLIGFHTFDYARHFLSC 273 (863)
Q Consensus 201 D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~l-----p-~r~e-il~~ll~~dligF~t~~~~~~Fl~~ 273 (863)
|+|.+|++....++..+.+.. ++++.+..|...+........ + .+.. ....+..+|.+.+.+......+...
T Consensus 103 Div~~~~~~~~~~~~~~~~~~-~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~ 181 (398)
T cd03800 103 DLIHAHYWDSGLVALLLARRL-GIPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAADRVIASTPQEAEELYSL 181 (398)
T ss_pred cEEEEecCccchHHHHHHhhc-CCceEEEeecccccCCcccccccccchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHHH
Confidence 999999988777777776554 688999999765322111000 0 0111 1234557899988887766655431
Q ss_pred HHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCHHHH
Q 002955 274 CSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLK 353 (863)
Q Consensus 274 ~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~ 353 (863)
.+ ....++.++|+|+|...+...... ....+++. ...++.+|+++||+++.||+..+
T Consensus 182 ----~~---------------~~~~~~~vi~ng~~~~~~~~~~~~---~~~~~~~~-~~~~~~~i~~~gr~~~~k~~~~l 238 (398)
T cd03800 182 ----YG---------------AYPRRIRVVPPGVDLERFTPYGRA---EARRARLL-RDPDKPRILAVGRLDPRKGIDTL 238 (398)
T ss_pred ----cc---------------ccccccEEECCCCCccceecccch---hhHHHhhc-cCCCCcEEEEEcccccccCHHHH
Confidence 00 112236789999998877532211 11111111 11467899999999999999999
Q ss_pred HHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcc
Q 002955 354 LLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAE 433 (863)
Q Consensus 354 l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~AD 433 (863)
++|+..+.+++|+++ |+.+|....... .....+++.++++. +..+-+.+.+.++.+++..+|+.||
T Consensus 239 l~a~~~l~~~~~~~~----l~i~G~~~~~~~---~~~~~~~~~~~~~~-------~~~~~v~~~g~~~~~~~~~~~~~ad 304 (398)
T cd03800 239 IRAYAELPELRERAN----LVIVGGPRDDIL---AMDEEELRELAREL-------GVIDRVDFPGRVSREDLPALYRAAD 304 (398)
T ss_pred HHHHHHHHHhCCCeE----EEEEECCCCcch---hhhhHHHHHHHHhc-------CCCceEEEeccCCHHHHHHHHHhCC
Confidence 999999988887766 888885432221 22223344444443 2223456778999999999999999
Q ss_pred ceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC---CceEeCCCCHHHHHHHHHHH
Q 002955 434 CCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAMDSA 510 (863)
Q Consensus 434 v~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al~VnP~d~~~~A~ai~~a 510 (863)
++++||..||||++++|||+| +.|+|+|+.+|..+.+. .|++++|.|+++++++|.++
T Consensus 305 i~l~ps~~e~~~~~l~Ea~a~-------------------G~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l 365 (398)
T cd03800 305 VFVNPALYEPFGLTALEAMAC-------------------GLPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRL 365 (398)
T ss_pred EEEecccccccCcHHHHHHhc-------------------CCCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHH
Confidence 999999999999999999999 56799999999888872 48999999999999999999
Q ss_pred hCCCHHHHHHHHHHHhhhh-ccCCHHHHHHHHH
Q 002955 511 LGVSDAEKQMRHEKHYRYV-STHDVAYWARSFL 542 (863)
Q Consensus 511 L~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l 542 (863)
++.+ ++++...++.++++ ..+++..++++++
T Consensus 366 ~~~~-~~~~~~~~~a~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 366 LTDP-ALRRRLSRAGLRRARARYTWERVAARLL 397 (398)
T ss_pred HhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 9764 44555555666666 7788888888765
No 55
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=99.85 E-value=1.5e-19 Score=204.65 Aligned_cols=285 Identities=15% Similarity=0.139 Sum_probs=198.2
Q ss_pred CCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhh-----cCCChHH-HHHHHHhCCEecccCHHHHHHHHHH
Q 002955 200 DDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYR-----TLPIRDE-LLRALLNADLIGFHTFDYARHFLSC 273 (863)
Q Consensus 200 ~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r-----~lp~r~e-il~~ll~~dligF~t~~~~~~Fl~~ 273 (863)
.|+|++|++...+.+.+++ +..++|+.+.+|..+|...... ....... ....+-.+|.|-..+....+.+...
T Consensus 84 ~divh~~~~~~~~~~~~~~-~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~ 162 (388)
T TIGR02149 84 ADVVHSHTWYTFLAGHLAK-KLYDKPLVVTAHSLEPLRPWKEEQLGGGYKLSSWAEKTAIEAADRVIAVSGGMREDILKY 162 (388)
T ss_pred CCeEeecchhhhhHHHHHH-HhcCCCEEEEeecccccccccccccccchhHHHHHHHHHHhhCCEEEEccHHHHHHHHHH
Confidence 4999999988766555544 4557899999998765321100 0000111 1233456788877777666555431
Q ss_pred HHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh---CCCeEEEeecCcccccCH
Q 002955 274 CSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMDIFKGI 350 (863)
Q Consensus 274 ~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~~KGi 350 (863)
. -+ -...++.++|+|+|...+... . ...+++++ .++++|+++||+.+.||+
T Consensus 163 ~---~~---------------~~~~~i~vi~ng~~~~~~~~~----~----~~~~~~~~~~~~~~~~i~~~Grl~~~Kg~ 216 (388)
T TIGR02149 163 Y---PD---------------LDPEKVHVIYNGIDTKEYKPD----D----GNVVLDRYGIDRSRPYILFVGRITRQKGV 216 (388)
T ss_pred c---CC---------------CCcceEEEecCCCChhhcCCC----c----hHHHHHHhCCCCCceEEEEEcccccccCH
Confidence 0 01 112456789999998877521 1 12233443 457799999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHH
Q 002955 351 SLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYV 430 (863)
Q Consensus 351 ~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~ 430 (863)
..+++|+.++. ++++ |+.+|.. ++..++.+++.+.+...+.. ...|+++.+.++.+++..+|+
T Consensus 217 ~~li~a~~~l~---~~~~----l~i~g~g-----~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~~~~ 279 (388)
T TIGR02149 217 PHLLDAVHYIP---KDVQ----VVLCAGA-----PDTPEVAEEVRQAVALLDRN-----RTGIIWINKMLPKEELVELLS 279 (388)
T ss_pred HHHHHHHHHHh---hcCc----EEEEeCC-----CCcHHHHHHHHHHHHHhccc-----cCceEEecCCCCHHHHHHHHH
Confidence 99999998873 3433 6666532 22234455555555554321 123677888999999999999
Q ss_pred hccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC---CceEeCCCCH------H
Q 002955 431 IAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNI------D 501 (863)
Q Consensus 431 ~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al~VnP~d~------~ 501 (863)
.||++|+||..||||++++|||+| +.|+|+|..+|..+.+. .|++++|.|. +
T Consensus 280 ~aDv~v~ps~~e~~g~~~lEA~a~-------------------G~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~ 340 (388)
T TIGR02149 280 NAEVFVCPSIYEPLGIVNLEAMAC-------------------GTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQA 340 (388)
T ss_pred hCCEEEeCCccCCCChHHHHHHHc-------------------CCCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHH
Confidence 999999999999999999999999 56799999999888773 4899999998 9
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHhhhh-ccCCHHHHHHHHHHHHHHH
Q 002955 502 AVAEAMDSALGVSDAEKQMRHEKHYRYV-STHDVAYWARSFLQDLERA 548 (863)
Q Consensus 502 ~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~~ 548 (863)
+++++|.++++. +++++...++.++++ ..+++..+++++++.++++
T Consensus 341 ~l~~~i~~l~~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~ 387 (388)
T TIGR02149 341 ELAKAINILLAD-PELAKKMGIAGRKRAEEEFSWGSIAKKTVEMYRKV 387 (388)
T ss_pred HHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhh
Confidence 999999999875 444455555556555 5689999999988776653
No 56
>PLN00142 sucrose synthase
Probab=99.85 E-value=2e-19 Score=214.28 Aligned_cols=330 Identities=13% Similarity=0.172 Sum_probs=203.9
Q ss_pred hhhHHHHHHHHHHHHHHHHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeC-----------CCCChh-Hhhc
Q 002955 175 RSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHS-----------PFPSSE-IYRT 242 (863)
Q Consensus 175 ~~~w~~Y~~vN~~fa~~i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~-----------PfP~~e-~~r~ 242 (863)
.+.|..-.+++...++.+........|+|+-|.+.=-++...|++++ +++..++.|. .|...| -|+.
T Consensus 384 e~l~p~L~~f~~~~~~~~~~~~~~~PDlIHaHYwdsg~vA~~La~~l-gVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~ 462 (815)
T PLN00142 384 FDVWPYLETFAEDAASEILAELQGKPDLIIGNYSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKKFDDKYHF 462 (815)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHh-CCCEEEEcccchhhhccccCCcccccchhhhh
Confidence 45677777777777777654443113999999666667888888776 6999999993 222111 1221
Q ss_pred C-CChHHHHHHHHhCCEecccCHHHHHHHHHHHHhhhCceeccc---------CceeeEEEcCeEEEEEEeccccCchHH
Q 002955 243 L-PIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSK---------RGYIGLEYFGRTVSIKILPVGIHIGQL 312 (863)
Q Consensus 243 l-p~r~eil~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~---------~~~~~~~~~gr~~~i~v~p~GId~~~~ 312 (863)
. -...|.+ .|-.||.|--.|+.-....-. ++ + .|.+- +-..+++++. -++.++|+|+|...|
T Consensus 463 ~~r~~aE~~-a~~~Ad~IIasT~qEi~g~~~---~i-~-qy~sh~~f~~p~L~rvv~GId~~~--~ki~VVppGvD~~~F 534 (815)
T PLN00142 463 SCQFTADLI-AMNHADFIITSTYQEIAGSKD---TV-G-QYESHTAFTLPGLYRVVHGIDVFD--PKFNIVSPGADMSIY 534 (815)
T ss_pred hhchHHHHH-HHHhhhHHHhCcHHHHhcccc---hh-h-hhhcccccccchhhhhhccccccc--cCeeEECCCCChhhc
Confidence 1 1111222 455677665444322210000 00 0 01000 0000122111 277889999999988
Q ss_pred HhhcCCchHHHHH--------------HHHHHHh-----CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEE
Q 002955 313 QSVLNLPETEAKV--------------AELQDQF-----KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVL 373 (863)
Q Consensus 313 ~~~~~~~~~~~~~--------------~~l~~~~-----~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvL 373 (863)
.+... ...+. ...++.+ .++++|++|+|+++.||+..+++||.++.+..+++ .|
T Consensus 535 ~P~~~---~~~rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~----~L 607 (815)
T PLN00142 535 FPYTE---KQKRLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELV----NL 607 (815)
T ss_pred CCCCh---HHhhHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCc----EE
Confidence 63211 00100 0011111 35679999999999999999999999886665554 48
Q ss_pred EEEecCCC-CCchhHHH--HHHHHHHHHHHHhhccCCCCcccEEEEc---CCCCHHHHHHHHH-hccceeecccccCCCc
Q 002955 374 VQIANPAR-GRGRDVQE--VQSETHATVRRINKIFGRPGYQPVVLID---TPLQFYERIAYYV-IAECCLVTAVRDGMNL 446 (863)
Q Consensus 374 vqi~~p~r-~~~~~~~~--~~~~v~~l~~~IN~~~g~~~~~pv~~~~---~~v~~~el~aly~-~ADv~vvtS~~EGmnL 446 (863)
++||.+.. ...++.++ ..+++.+++++. +..+ .|.++. +..+..+++.+|+ ++|+||+||.+||||+
T Consensus 608 VIVGgg~d~~~s~d~ee~~el~~L~~La~~l----gL~~--~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGL 681 (815)
T PLN00142 608 VVVGGFIDPSKSKDREEIAEIKKMHSLIEKY----NLKG--QFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGL 681 (815)
T ss_pred EEEECCccccccccHHHHHHHHHHHHHHHHc----CCCC--cEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCH
Confidence 88885411 11111111 123344455544 2222 244432 2456678888877 5799999999999999
Q ss_pred cceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC---CceEeCCCCHHHHHHHHHHHhC---CCHHHHHH
Q 002955 447 IPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAMDSALG---VSDAEKQM 520 (863)
Q Consensus 447 v~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~---m~~~er~~ 520 (863)
|++||||| |.|+|+|..+|..+.+. .|++|+|.|++++|++|.+++. ..++.++.
T Consensus 682 vvLEAMA~-------------------GlPVVATdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~ 742 (815)
T PLN00142 682 TVVEAMTC-------------------GLPTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNK 742 (815)
T ss_pred HHHHHHHc-------------------CCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 99999999 56799999999998883 4899999999999999987653 24445555
Q ss_pred HHHHHhhhh-ccCCHHHHHHHHHHHH
Q 002955 521 RHEKHYRYV-STHDVAYWARSFLQDL 545 (863)
Q Consensus 521 r~~~~~~~v-~~~~~~~W~~~~l~~l 545 (863)
..++.++.+ +.+++...++++++-.
T Consensus 743 mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 743 ISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 555556666 5689888888877644
No 57
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.85 E-value=1.5e-19 Score=203.84 Aligned_cols=207 Identities=14% Similarity=0.165 Sum_probs=155.8
Q ss_pred EEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh--CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEE
Q 002955 298 VSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF--KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQ 375 (863)
Q Consensus 298 ~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvq 375 (863)
.++.++|+|||.+.|..... . .....++.+ .++.+|+++||+++.||+..+++|+.++++++|+...++.|+.
T Consensus 160 ~~~~vi~ngvd~~~~~~~~~---~--~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i 234 (374)
T TIGR03088 160 AKIHQIYNGVDTERFHPSRG---D--RSPILPPDFFADESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVI 234 (374)
T ss_pred hhEEEeccCccccccCCCcc---c--hhhhhHhhcCCCCCeEEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEE
Confidence 45677899999987753211 1 111112222 4678999999999999999999999999999987666788998
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeee
Q 002955 376 IANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICR 455 (863)
Q Consensus 376 i~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~ 455 (863)
+|. |+..+++ ++.+++. +....+++.|. .+++..+|+.||++|+||..||||++++|||+|
T Consensus 235 ~G~-----g~~~~~~----~~~~~~~-------~~~~~v~~~g~--~~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~- 295 (374)
T TIGR03088 235 VGD-----GPARGAC----EQMVRAA-------GLAHLVWLPGE--RDDVPALMQALDLFVLPSLAEGISNTILEAMAS- 295 (374)
T ss_pred ecC-----CchHHHH----HHHHHHc-------CCcceEEEcCC--cCCHHHHHHhcCEEEeccccccCchHHHHHHHc-
Confidence 883 3332333 3333332 23345667664 578999999999999999999999999999999
Q ss_pred cCCcccccccCCCCCCCCCccEEecccccCcccCC---CceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhh-cc
Q 002955 456 QGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYV-ST 531 (863)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~ 531 (863)
+.|+|+|..+|..+.+. .|++++|.|++++|++|.++++.+ +.+....++.++++ ..
T Consensus 296 ------------------G~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~~-~~~~~~~~~a~~~~~~~ 356 (374)
T TIGR03088 296 ------------------GLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYVSDP-AARRAHGAAGRARAEQQ 356 (374)
T ss_pred ------------------CCCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHh
Confidence 56799999999888873 389999999999999999998754 44555556667776 56
Q ss_pred CCHHHHHHHHHHHHHH
Q 002955 532 HDVAYWARSFLQDLER 547 (863)
Q Consensus 532 ~~~~~W~~~~l~~l~~ 547 (863)
+++...++++.+-..+
T Consensus 357 fs~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 357 FSINAMVAAYAGLYDQ 372 (374)
T ss_pred CCHHHHHHHHHHHHHH
Confidence 8888888887765543
No 58
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=99.85 E-value=4.5e-19 Score=211.25 Aligned_cols=339 Identities=12% Similarity=0.135 Sum_probs=203.0
Q ss_pred hhHHHHHHHHHHHHHHHHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCC----CChhHh-hcCC------
Q 002955 176 SLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPF----PSSEIY-RTLP------ 244 (863)
Q Consensus 176 ~~w~~Y~~vN~~fa~~i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~Pf----P~~e~~-r~lp------ 244 (863)
+.|..-..++...++.+........|+|+.|.+.=-++...|+++. +++..+..|..= +.+..+ ..+.
T Consensus 362 ~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~l-gVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~ 440 (784)
T TIGR02470 362 EIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKL-GVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFS 440 (784)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHhc-CCCEEEECCcchhhcccccccccccchhHHHhh
Confidence 4566666666667766654443123999999877777888887776 588888888541 111100 0010
Q ss_pred Ch-HHHHHHHHhCCEecccCHHHHHHHHHHHHhhhCceec-ccCceeeEEEc--CeEEEEEEeccccCchHHHhhcCCch
Q 002955 245 IR-DELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQ-SKRGYIGLEYF--GRTVSIKILPVGIHIGQLQSVLNLPE 320 (863)
Q Consensus 245 ~r-~eil~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~-~~~~~~~~~~~--gr~~~i~v~p~GId~~~~~~~~~~~~ 320 (863)
.+ ..=+..|-.||.|--.|+.-+..-...+.. .+.... ...+...+..+ ...-++.++|+|+|+..|.+......
T Consensus 441 ~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~q-Y~s~~~ft~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~ 519 (784)
T TIGR02470 441 CQFTADLIAMNAADFIITSTYQEIAGTKDSVGQ-YESHQAFTMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEK 519 (784)
T ss_pred hhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhh-hhhcccccccceeeeecCccCCcCCeEEECCCcChhhcCCCCchhh
Confidence 01 001255667898876665321110000000 000000 00011111110 11237788999999998864321110
Q ss_pred HH-HHH----------HHHHHHh-----CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCC--
Q 002955 321 TE-AKV----------AELQDQF-----KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARG-- 382 (863)
Q Consensus 321 ~~-~~~----------~~l~~~~-----~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~-- 382 (863)
.. ... ...++.+ .++++|++|+|+++.||+..+++||.++.+..+ .+.||+||.+...
T Consensus 520 r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~----~~~LVIVGGg~~~~~ 595 (784)
T TIGR02470 520 RLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRE----LVNLVVVAGKLDAKE 595 (784)
T ss_pred hhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCC----CeEEEEEeCCccccc
Confidence 00 000 1112332 467899999999999999999999987644333 3558888864321
Q ss_pred -CchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHH----hccceeecccccCCCccceeeeeeecC
Q 002955 383 -RGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYV----IAECCLVTAVRDGMNLIPYEYIICRQG 457 (863)
Q Consensus 383 -~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~----~ADv~vvtS~~EGmnLv~~Ea~a~~~~ 457 (863)
...+..+..+++.+++++. |-.+ .|.++....+..++..+|+ .+||||+||.+||||||++|||||
T Consensus 596 s~d~ee~~~i~~L~~la~~~----gL~g--~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAc--- 666 (784)
T TIGR02470 596 SKDREEQAEIEKMHNLIDQY----QLHG--QIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTC--- 666 (784)
T ss_pred ccchhHHHHHHHHHHHHHHh----CCCC--eEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHc---
Confidence 1111122334455555554 2222 2444332235556666665 247999999999999999999999
Q ss_pred CcccccccCCCCCCCCCccEEecccccCcccCC---CceEeCCCCHHHHHHHHHHHhC---CCHHHHHHHHHHHhhhh-c
Q 002955 458 NEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAMDSALG---VSDAEKQMRHEKHYRYV-S 530 (863)
Q Consensus 458 ~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~---m~~~er~~r~~~~~~~v-~ 530 (863)
|.|+|+|..+|..+.+. .|++|+|.|++++|++|.++++ ..++.++...++.++++ +
T Consensus 667 ----------------GlPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~ 730 (784)
T TIGR02470 667 ----------------GLPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYE 730 (784)
T ss_pred ----------------CCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 67899999999999883 4899999999999999999873 23444444455556665 5
Q ss_pred cCCHHHHHHHHHHHH
Q 002955 531 THDVAYWARSFLQDL 545 (863)
Q Consensus 531 ~~~~~~W~~~~l~~l 545 (863)
.++|...++++++..
T Consensus 731 ~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 731 KYTWKIYSERLLTLA 745 (784)
T ss_pred hCCHHHHHHHHHHHH
Confidence 688888888877654
No 59
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=99.85 E-value=1.6e-19 Score=201.17 Aligned_cols=281 Identities=18% Similarity=0.226 Sum_probs=194.9
Q ss_pred HHHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHH-HhCCEecccCHHHHHH
Q 002955 191 KVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRAL-LNADLIGFHTFDYARH 269 (863)
Q Consensus 191 ~i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~l-l~~dligF~t~~~~~~ 269 (863)
++++..+| |+|++|.+|..++..+++...+..++....|...+..-+ +..+.+-. .-++.+...+....+.
T Consensus 73 ~~~~~~~p--div~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~~~------~~~~~~~~~~~~~~~~~~s~~~~~~ 144 (360)
T cd04951 73 KILRQFKP--DVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGGRL------RMLAYRLTDFLSDLTTNVSKEALDY 144 (360)
T ss_pred HHHHhcCC--CEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchhHH------HHHHHHHHhhccCceEEEcHHHHHH
Confidence 34556677 899999999888888887777777888888854332111 11111111 1134443344444444
Q ss_pred HHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh---CCCeEEEeecCccc
Q 002955 270 FLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMDI 346 (863)
Q Consensus 270 Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~ 346 (863)
|+.. + .-...++.++|+|+|...|... ......+++++ .++.+++++||+.+
T Consensus 145 ~~~~-----~--------------~~~~~~~~~i~ng~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~g~~~~ 199 (360)
T cd04951 145 FIAS-----K--------------AFNANKSFVVYNGIDTDRFRKD------PARRLKIRNALGVKNDTFVILAVGRLVE 199 (360)
T ss_pred HHhc-----c--------------CCCcccEEEEccccchhhcCcc------hHHHHHHHHHcCcCCCCEEEEEEeeCch
Confidence 4321 0 0112356778999998876421 11223445554 46789999999999
Q ss_pred ccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHH
Q 002955 347 FKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERI 426 (863)
Q Consensus 347 ~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~ 426 (863)
.||+..+++|+.++.+++|+++ |+++|. ++..+++++ .+.+.| ..+.+.+.+. .+++.
T Consensus 200 ~kg~~~li~a~~~l~~~~~~~~----l~i~G~-----g~~~~~~~~----~~~~~~-------~~~~v~~~g~--~~~~~ 257 (360)
T cd04951 200 AKDYPNLLKAFAKLLSDYLDIK----LLIAGD-----GPLRATLER----LIKALG-------LSNRVKLLGL--RDDIA 257 (360)
T ss_pred hcCcHHHHHHHHHHHhhCCCeE----EEEEcC-----CCcHHHHHH----HHHhcC-------CCCcEEEecc--cccHH
Confidence 9999999999999999888776 888873 333333333 333322 2233444554 46899
Q ss_pred HHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC-CCceEeCCCCHHHHHH
Q 002955 427 AYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-SGAIRVNPWNIDAVAE 505 (863)
Q Consensus 427 aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l-~~al~VnP~d~~~~A~ 505 (863)
.+|+.||++++||..||||++++|||+| +.|+|+|+.+|..+.+ ..|..++|.|++++++
T Consensus 258 ~~~~~ad~~v~~s~~e~~~~~~~Ea~a~-------------------G~PvI~~~~~~~~e~i~~~g~~~~~~~~~~~~~ 318 (360)
T cd04951 258 AYYNAADLFVLSSAWEGFGLVVAEAMAC-------------------ELPVVATDAGGVREVVGDSGLIVPISDPEALAN 318 (360)
T ss_pred HHHHhhceEEecccccCCChHHHHHHHc-------------------CCCEEEecCCChhhEecCCceEeCCCCHHHHHH
Confidence 9999999999999999999999999999 5679999998888877 4589999999999999
Q ss_pred HHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHH
Q 002955 506 AMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDL 545 (863)
Q Consensus 506 ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 545 (863)
+|.+++++++..+..+.++.......+++..+++++++-+
T Consensus 319 ~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y 358 (360)
T cd04951 319 KIDEILKMSGEERDIIGARRERIVKKFSINSIVQQWLTLY 358 (360)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh
Confidence 9999998777776666555333446689999998887643
No 60
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=99.84 E-value=2.4e-19 Score=205.68 Aligned_cols=273 Identities=17% Similarity=0.143 Sum_probs=179.8
Q ss_pred cCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcC-------------CChH--HHH----------
Q 002955 196 ISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTL-------------PIRD--ELL---------- 250 (863)
Q Consensus 196 ~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~l-------------p~r~--eil---------- 250 (863)
.+| |+|..| +-+..+-.+.+.++++|+++++|-|.-+++.+..+ ..+. .++
T Consensus 106 ~~p--Dv~i~~--~g~~~~~~~~~~~~~~~~i~y~h~P~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~ 181 (419)
T cd03806 106 LVP--DIFIDT--MGYPFTYPLVRLLGGCPVGAYVHYPTISTDMLQKVRSREASYNNSATIARSPVLSKAKLLYYRLFAF 181 (419)
T ss_pred cCC--CEEEEc--CCcccHHHHHHHhcCCeEEEEecCCcchHHHHHHHhhccccccCccchhccchHHHHHHHHHHHHHH
Confidence 357 755444 33333334556677899999999433244544221 1111 111
Q ss_pred ---HHHHhCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHH
Q 002955 251 ---RALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAE 327 (863)
Q Consensus 251 ---~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~ 327 (863)
..+-.||.|-..+..-..++.+. .+...++.++|+|+|.+.|.... .
T Consensus 182 ~~~~~~~~aD~ii~~S~~~~~~~~~~--------------------~~~~~~~~vi~~gvd~~~~~~~~---~------- 231 (419)
T cd03806 182 LYGLAGSFADVVMVNSTWTRNHIRSL--------------------WKRNTKPSIVYPPCDVEELLKLP---L------- 231 (419)
T ss_pred HHHHHhhcCCEEEECCHHHHHHHHHH--------------------hCcCCCcEEEcCCCCHHHhcccc---c-------
Confidence 12335677666665444444321 01112567789999998775221 0
Q ss_pred HHHHhCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCC-CceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccC
Q 002955 328 LQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKR-GKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFG 406 (863)
Q Consensus 328 l~~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~-~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g 406 (863)
....++.+|++++|+.+.||+...++||.++.+++|+.. .++.|+++|.... .+..+..+++++++++.+
T Consensus 232 --~~~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~---~~~~~~~~~L~~~~~~l~---- 302 (419)
T cd03806 232 --DEKTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRN---EDDEKRVEDLKLLAKELG---- 302 (419)
T ss_pred --ccccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCC---cccHHHHHHHHHHHHHhC----
Confidence 012456799999999999999999999999999887631 2466888885321 111234556666666552
Q ss_pred CCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCc
Q 002955 407 RPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCS 486 (863)
Q Consensus 407 ~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~ 486 (863)
....+.|.+.++.+++..+|+.||++|.||..||||++++||||| +.|+|+|..+|..
T Consensus 303 ---l~~~V~f~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~-------------------G~pvIa~~~ggp~ 360 (419)
T cd03806 303 ---LEDKVEFVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAA-------------------GLIPLAHASGGPL 360 (419)
T ss_pred ---CCCeEEEecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHc-------------------CCcEEEEcCCCCc
Confidence 223456677899999999999999999999999999999999999 5568888887765
Q ss_pred cc-CC------CceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHH
Q 002955 487 PS-LS------GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVA 535 (863)
Q Consensus 487 ~~-l~------~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~ 535 (863)
+. +. .|++++ |++++|++|.+++++++++++.+.+..++....++..
T Consensus 361 ~~iv~~~~~g~~G~l~~--d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~fs~~ 414 (419)
T cd03806 361 LDIVVPWDGGPTGFLAS--TAEEYAEAIEKILSLSEEERLRIRRAARSSVKRFSDE 414 (419)
T ss_pred hheeeccCCCCceEEeC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhCHH
Confidence 43 33 378874 9999999999999998776665444444444445543
No 61
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.84 E-value=3.1e-19 Score=200.00 Aligned_cols=274 Identities=19% Similarity=0.133 Sum_probs=190.6
Q ss_pred HHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCC----CChhHhhcCCChHHHHH-HHHhCCEecccCHHH
Q 002955 192 VMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPF----PSSEIYRTLPIRDELLR-ALLNADLIGFHTFDY 266 (863)
Q Consensus 192 i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~Pf----P~~e~~r~lp~r~eil~-~ll~~dligF~t~~~ 266 (863)
+++..+| |+|++|+.+..+....+.++ .++|+.+.+|.-. +.............+.+ .+-.+|.|-+.+...
T Consensus 77 ~~~~~~~--dvvh~~~~~~~~~~~~~~~~-~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~ 153 (367)
T cd05844 77 LLRRHRP--DLVHAHFGFDGVYALPLARR-LGVPLVVTFHGFDATTSLALLLRSRWALYARRRRRLARRAALFIAVSQFI 153 (367)
T ss_pred HHHhhCC--CEEEeccCchHHHHHHHHHH-cCCCEEEEEeCccccccchhhcccchhHHHHHHHHHHHhcCEEEECCHHH
Confidence 4556677 89999977654444444333 3688999888422 22111110001112222 234578888777655
Q ss_pred HHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCccc
Q 002955 267 ARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDI 346 (863)
Q Consensus 267 ~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~ 346 (863)
.+.+... |. ...++.++|+|+|.+.+.... ...+++.++++||+.+
T Consensus 154 ~~~~~~~-----~~---------------~~~~i~vi~~g~d~~~~~~~~--------------~~~~~~~i~~~G~~~~ 199 (367)
T cd05844 154 RDRLLAL-----GF---------------PPEKVHVHPIGVDTAKFTPAT--------------PARRPPRILFVGRFVE 199 (367)
T ss_pred HHHHHHc-----CC---------------CHHHeEEecCCCCHHhcCCCC--------------CCCCCcEEEEEEeecc
Confidence 5444431 21 123566789999988775210 0134668999999999
Q ss_pred ccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHH
Q 002955 347 FKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERI 426 (863)
Q Consensus 347 ~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~ 426 (863)
.||+..+++|+..+.+++|+++ |+++|. ++. .+++.+++++. +..+.+.+.|.++.+++.
T Consensus 200 ~K~~~~li~a~~~l~~~~~~~~----l~ivG~-----g~~----~~~~~~~~~~~-------~~~~~v~~~g~~~~~~l~ 259 (367)
T cd05844 200 KKGPLLLLEAFARLARRVPEVR----LVIIGD-----GPL----LAALEALARAL-------GLGGRVTFLGAQPHAEVR 259 (367)
T ss_pred ccChHHHHHHHHHHHHhCCCeE----EEEEeC-----chH----HHHHHHHHHHc-------CCCCeEEECCCCCHHHHH
Confidence 9999999999999998888766 888873 332 23344444442 223345678899999999
Q ss_pred HHHHhccceeeccc------ccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC---CCceEeCC
Q 002955 427 AYYVIAECCLVTAV------RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL---SGAIRVNP 497 (863)
Q Consensus 427 aly~~ADv~vvtS~------~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l---~~al~VnP 497 (863)
.+|+.||++|+||. .||||++++|||+| |.|+|+|+.+|..+.+ ..|++++|
T Consensus 260 ~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~-------------------G~PvI~s~~~~~~e~i~~~~~g~~~~~ 320 (367)
T cd05844 260 ELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQAS-------------------GVPVVATRHGGIPEAVEDGETGLLVPE 320 (367)
T ss_pred HHHHhCCEEEECcccCCCCCccCCchHHHHHHHc-------------------CCCEEEeCCCCchhheecCCeeEEECC
Confidence 99999999999997 59999999999999 5679999999988877 24899999
Q ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhh-ccCCHHHHHHHHH
Q 002955 498 WNIDAVAEAMDSALGVSDAEKQMRHEKHYRYV-STHDVAYWARSFL 542 (863)
Q Consensus 498 ~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l 542 (863)
.|+++++++|.++++.+ +.+.....+.++++ ..+++..+++.+.
T Consensus 321 ~d~~~l~~~i~~l~~~~-~~~~~~~~~a~~~~~~~~s~~~~~~~l~ 365 (367)
T cd05844 321 GDVAALAAALGRLLADP-DLRARMGAAGRRRVEERFDLRRQTAKLE 365 (367)
T ss_pred CCHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHHCCHHHHHHHHh
Confidence 99999999999998754 44445555666666 4588888887764
No 62
>PLN02382 probable sucrose-phosphatase
Probab=99.84 E-value=9.6e-20 Score=206.64 Aligned_cols=225 Identities=17% Similarity=0.185 Sum_probs=146.7
Q ss_pred hcccceeEecCCccccCCCCCCCCCCHHHHHHH-HHhhcCCCCeEEEEcCCChhhHHHHhhccC---CceEEccCcEEEE
Q 002955 589 RTKNRAILLDYDGTIMVPGSISTSPNAEAVAIL-DNLCRDPKNVVFLVSGKDRDTLAEWFSSCE---GLGIAAEHGYFVR 664 (863)
Q Consensus 589 ~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL-~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~---~l~liaenGa~I~ 664 (863)
.+.+.+|++||||||++.. .++.++.....++ +++ .++|+.++++|||+...+.++...++ +..+|+.||+.|.
T Consensus 6 ~~~~~lI~sDLDGTLL~~~-~~~~~s~~~~~~l~~~~-~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~ 83 (413)
T PLN02382 6 GSPRLMIVSDLDHTMVDHH-DPENLSLLRFNALWEAE-YRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIA 83 (413)
T ss_pred CCCCEEEEEcCCCcCcCCC-CccchhHHHHHHHHHHh-hcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEE
Confidence 4557799999999999831 1446776666666 776 78899999999999888888766542 2236777999998
Q ss_pred eCCceeEEeecCCCCccHHHHHH---------HHHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHH
Q 002955 665 PNYGVDWETCVSVPDFSWKQIAE---------PVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESV 735 (863)
Q Consensus 665 ~~~~~~w~~~~~~~~~~w~~~v~---------~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~ 735 (863)
..+... .+..|...+. +.+..|.........+.+...+.+.+.. ..+.++.+.+.+.
T Consensus 84 ~~~~~~-------~d~~w~~~l~~~w~~~~v~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~-------~~~~~~~~~l~~~ 149 (413)
T PLN02382 84 YGESMV-------PDHGWVEYLNKKWDREIVVEETSKFPELKLQPETEQRPHKVSFYVDK-------KKAQEVIKELSER 149 (413)
T ss_pred eCCCCc-------cChhHHHHHhccCChhhHHHHHhcCCCcccCCcccCCCeEEEEEech-------HHhHHHHHHHHHH
Confidence 754211 1223333222 1111121111111112222233332221 1233445556555
Q ss_pred hcCC--C-eEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhh-hhcCCCCCCCCcce
Q 002955 736 LANE--P-VSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIK-SAAAGPSLSPVAEV 811 (863)
Q Consensus 736 l~~~--~-~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag-~~~~~~~~~~~~~~ 811 (863)
+... . ..+.++..++||.|+++|||.|+++|++++...|++++++++|||+.||++||+.++ .+
T Consensus 150 ~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~g------------ 217 (413)
T PLN02382 150 LEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYG------------ 217 (413)
T ss_pred HHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCE------------
Confidence 5432 2 344678899999999999999999999998656899999999999999999999998 54
Q ss_pred EEEEeCCCc------------cccceec---CCHhHHHHHHHHHHHh
Q 002955 812 FACTVGQKP------------SKAKYYL---DDTAEILRMLLGLAEA 843 (863)
Q Consensus 812 ~av~vG~~~------------s~A~y~l---~d~~eV~~~L~~L~~~ 843 (863)
|+||+.. ..|++++ ++.+++.+.|+.+.-.
T Consensus 218 --vam~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~~f~l~ 262 (413)
T PLN02382 218 --VMVSNAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIGHFNLG 262 (413)
T ss_pred --EEEcCCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHHHhCCC
Confidence 4455431 2345553 2578999999988743
No 63
>PLN02423 phosphomannomutase
Probab=99.83 E-value=2.6e-19 Score=190.16 Aligned_cols=210 Identities=17% Similarity=0.163 Sum_probs=136.1
Q ss_pred cceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc-C-C-ceEEccCcEEEEeCCc
Q 002955 592 NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC-E-G-LGIAAEHGYFVRPNYG 668 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l-~-~-l~liaenGa~I~~~~~ 668 (863)
++++++|+||||++ .++.+++++.++|++| ++. +.|++||||+...+.+.+... . . ..++++||+++...+.
T Consensus 7 ~~i~~~D~DGTLl~---~~~~i~~~~~~ai~~l-~~~-i~fviaTGR~~~~~~~~~~~~~~~~~~~~I~~NGa~i~~~g~ 81 (245)
T PLN02423 7 GVIALFDVDGTLTA---PRKEATPEMLEFMKEL-RKV-VTVGVVGGSDLSKISEQLGKTVINDYDYVFSENGLVAHKDGK 81 (245)
T ss_pred ceEEEEeccCCCcC---CCCcCCHHHHHHHHHH-HhC-CEEEEECCcCHHHHHHHhcccccccCCEEEECCceEEEeCCE
Confidence 45677999999998 6788999999999999 655 999999999999998888653 1 1 3688999999987665
Q ss_pred eeEEeecCC-CCccHHHHHHHHHHHHhh--------cCCCceeeeccceeEee--cccCCCC---------cchhhHHHH
Q 002955 669 VDWETCVSV-PDFSWKQIAEPVMKLYTE--------TTDGSTIETKESALVWN--FQYADPD---------FGSCQAKEL 728 (863)
Q Consensus 669 ~~w~~~~~~-~~~~w~~~v~~i~~~y~~--------~~~gs~ie~k~~~l~~~--y~~~d~~---------~~~~~a~el 728 (863)
..+...+.. .+. +.++++++...+ ...+.+++..+...... +.+.... .-.....++
T Consensus 82 ~i~~~~l~~~l~~---~~~~~ii~~~~~~~~~~~i~~~~~~~ie~~~~i~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~ 158 (245)
T PLN02423 82 LIGTQSLKSFLGE---DKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDKVHNIRPKM 158 (245)
T ss_pred EEEEecccccCCH---HHHHHHHHHHHHHHHHcCCccccCCeEEccCCccccCcccccCCHhHHhhHHhhCccchHHHHH
Confidence 544432211 111 222222221111 12244444332222111 1111000 001122344
Q ss_pred HHHHHHHhcCCC-eEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeC----CcchHHHHHHhhhhcCCC
Q 002955 729 LDHLESVLANEP-VSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGD----DRSDEDMFEVIKSAAAGP 803 (863)
Q Consensus 729 ~~~L~~~l~~~~-~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD----~~ND~~Mf~~ag~~~~~~ 803 (863)
.+.+.+.+.+.. ....+|..++||+|+|+|||.|++.|+ ++++|++||| +.||++||+.-|.
T Consensus 159 ~~~l~~~~~~~~~~~s~~g~~~iDi~~~gvnKg~al~~L~--------~~~e~~aFGD~~~~~~ND~eMl~~~~~----- 225 (245)
T PLN02423 159 VSVLREKFAHLNLTYSIGGQISFDVFPQGWDKTYCLQFLE--------DFDEIHFFGDKTYEGGNDHEIFESERT----- 225 (245)
T ss_pred HHHHHHhCCCCcEEEecCCcEEEEEeeCCCCHHHHHHHhc--------CcCeEEEEeccCCCCCCcHHHHhCCCc-----
Confidence 455555554422 233445689999999999999999997 5799999999 8999999997554
Q ss_pred CCCCCcceEEEEeCCCccccceecCCHhHHHHHHHHHH
Q 002955 804 SLSPVAEVFACTVGQKPSKAKYYLDDTAEILRMLLGLA 841 (863)
Q Consensus 804 ~~~~~~~~~av~vG~~~s~A~y~l~d~~eV~~~L~~L~ 841 (863)
.+.+ +.+++++.++|+++.
T Consensus 226 --------~~~~-----------~~~~~~~~~~~~~~~ 244 (245)
T PLN02423 226 --------IGHT-----------VTSPDDTREQCTALF 244 (245)
T ss_pred --------ceEE-----------eCCHHHHHHHHHHhc
Confidence 1333 457888888888763
No 64
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.82 E-value=3.9e-19 Score=207.32 Aligned_cols=276 Identities=17% Similarity=0.114 Sum_probs=188.8
Q ss_pred CCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCCh---hHhhc---CCChHH--------HH-HHHHhCCEeccc
Q 002955 198 PDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSS---EIYRT---LPIRDE--------LL-RALLNADLIGFH 262 (863)
Q Consensus 198 p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~---e~~r~---lp~r~e--------il-~~ll~~dligF~ 262 (863)
|+-|+|++|......++..+.++..+.|+.+..|--+|.. ++... .+.... +. ..+-.||.|...
T Consensus 172 ~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad~Ii~~ 251 (475)
T cd03813 172 PKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFESLGRLAYQAADRITTL 251 (475)
T ss_pred CCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhCCEEEec
Confidence 3459999998766666666655556899999999755421 22211 000001 10 112245555433
Q ss_pred CHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeec
Q 002955 263 TFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVD 342 (863)
Q Consensus 263 t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vd 342 (863)
+.... ..+. .++....++.++|+|||.+.|..... . ....++.+|+++|
T Consensus 252 s~~~~-~~~~-------------------~~g~~~~ki~vIpNgid~~~f~~~~~-----~------~~~~~~~~i~~vG 300 (475)
T cd03813 252 YEGNR-ERQI-------------------EDGADPEKIRVIPNGIDPERFAPARR-----A------RPEKEPPVVGLIG 300 (475)
T ss_pred CHHHH-HHHH-------------------HcCCCHHHeEEeCCCcCHHHcCCccc-----c------ccCCCCcEEEEEe
Confidence 33221 1111 11223346778999999988863211 0 1124678999999
Q ss_pred CcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCH
Q 002955 343 DMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQF 422 (863)
Q Consensus 343 rld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~ 422 (863)
|+.+.||+..+++|+..+.++.|+++ |+.+|... +..++.+++++++++.+. ...+.+.| .
T Consensus 301 rl~~~Kg~~~li~a~~~l~~~~p~~~----l~IvG~g~-----~~~~~~~e~~~li~~l~l-------~~~V~f~G---~ 361 (475)
T cd03813 301 RVVPIKDIKTFIRAAAIVRKKIPDAE----GWVIGPTD-----EDPEYAEECRELVESLGL-------EDNVKFTG---F 361 (475)
T ss_pred ccccccCHHHHHHHHHHHHHhCCCeE----EEEECCCC-----cChHHHHHHHHHHHHhCC-------CCeEEEcC---C
Confidence 99999999999999999999888876 88887421 223456667777766632 22345555 6
Q ss_pred HHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC-C--------Cce
Q 002955 423 YERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-S--------GAI 493 (863)
Q Consensus 423 ~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l-~--------~al 493 (863)
.++..+|+.||++|+||..|||+++++|||+| +.|+|+|..+|+.+.+ . .|+
T Consensus 362 ~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~-------------------G~PVVatd~g~~~elv~~~~~~~~g~~G~ 422 (475)
T cd03813 362 QNVKEYLPKLDVLVLTSISEGQPLVILEAMAA-------------------GIPVVATDVGSCRELIEGADDEALGPAGE 422 (475)
T ss_pred ccHHHHHHhCCEEEeCchhhcCChHHHHHHHc-------------------CCCEEECCCCChHHHhcCCcccccCCceE
Confidence 68999999999999999999999999999999 5679999999988877 3 489
Q ss_pred EeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhcc-CCHHHHHHHHHH
Q 002955 494 RVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVST-HDVAYWARSFLQ 543 (863)
Q Consensus 494 ~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~~l~ 543 (863)
+++|.|++++|++|.++++.+ +.++...+..++++.+ +++...++++.+
T Consensus 423 lv~~~d~~~la~ai~~ll~~~-~~~~~~~~~a~~~v~~~~s~~~~~~~y~~ 472 (475)
T cd03813 423 VVPPADPEALARAILRLLKDP-ELRRAMGEAGRKRVERYYTLERMIDSYRR 472 (475)
T ss_pred EECCCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 999999999999999999854 4455555666666655 566666666554
No 65
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=99.82 E-value=7.2e-19 Score=196.02 Aligned_cols=263 Identities=14% Similarity=0.110 Sum_probs=177.7
Q ss_pred HHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHH-HHHHhCCEecccCHHHHHHH
Q 002955 192 VMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELL-RALLNADLIGFHTFDYARHF 270 (863)
Q Consensus 192 i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil-~~ll~~dligF~t~~~~~~F 270 (863)
+.+..+| |+|++|..+...++.++.++.....+.+..|..+...+.+........+. ..+..+|.+-..+....+.+
T Consensus 75 ~~~~~~~--Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~ 152 (358)
T cd03812 75 LIKKNKY--DIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSHDKKKKILKYKVLRKLINRLATDYLACSEEAGKWL 152 (358)
T ss_pred HHhcCCC--CEEEEeCcchhHHHHHHHhhCCCCeEEEEeccccccccccchhhHHHHHHHHHHhcCCEEEEcCHHHHHHH
Confidence 3444555 99999999877777777766655666778887765444332211110111 11233566555554433333
Q ss_pred HHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh---CCCeEEEeecCcccc
Q 002955 271 LSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMDIF 347 (863)
Q Consensus 271 l~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~~ 347 (863)
... ....++.++|+|+|...+... +..... ++++ .++.+|+++||+++.
T Consensus 153 ~~~---------------------~~~~~~~vi~ngvd~~~~~~~---~~~~~~----~~~~~~~~~~~~i~~vGr~~~~ 204 (358)
T cd03812 153 FGK---------------------VKNKKFKVIPNGIDLEKFIFN---EEIRKK----RRELGILEDKFVIGHVGRFSEQ 204 (358)
T ss_pred HhC---------------------CCcccEEEEeccCcHHHcCCC---chhhhH----HHHcCCCCCCEEEEEEeccccc
Confidence 210 112356789999999877532 111111 2222 567899999999999
Q ss_pred cCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHH
Q 002955 348 KGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIA 427 (863)
Q Consensus 348 KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~a 427 (863)
||+..+++|+..+.+++|+++ |+.+|. ++..+.+++.+ ++. +..+.+.+.|. .+++..
T Consensus 205 Kg~~~li~a~~~l~~~~~~~~----l~ivG~-----g~~~~~~~~~~----~~~-------~~~~~v~~~g~--~~~~~~ 262 (358)
T cd03812 205 KNHEFLIEIFAELLKKNPNAK----LLLVGD-----GELEEEIKKKV----KEL-------GLEDKVIFLGV--RNDVPE 262 (358)
T ss_pred cChHHHHHHHHHHHHhCCCeE----EEEEeC-----CchHHHHHHHH----Hhc-------CCCCcEEEecc--cCCHHH
Confidence 999999999999999998876 888873 33333333333 222 22233445555 678999
Q ss_pred HHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC--CceEeCCCCHHHHHH
Q 002955 428 YYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS--GAIRVNPWNIDAVAE 505 (863)
Q Consensus 428 ly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~--~al~VnP~d~~~~A~ 505 (863)
+|+.||++|+||..||||++++|||+| |.|+|+|+.+|..+.+. ++++..+.+++++|+
T Consensus 263 ~~~~adi~v~ps~~E~~~~~~lEAma~-------------------G~PvI~s~~~~~~~~i~~~~~~~~~~~~~~~~a~ 323 (358)
T cd03812 263 LLQAMDVFLFPSLYEGLPLVLIEAQAS-------------------GLPCILSDTITKEVDLTDLVKFLSLDESPEIWAE 323 (358)
T ss_pred HHHhcCEEEecccccCCCHHHHHHHHh-------------------CCCEEEEcCCchhhhhccCccEEeCCCCHHHHHH
Confidence 999999999999999999999999999 57799999999888874 355555667899999
Q ss_pred HHHHHhCCCHHHHHHHHHHH
Q 002955 506 AMDSALGVSDAEKQMRHEKH 525 (863)
Q Consensus 506 ai~~aL~m~~~er~~r~~~~ 525 (863)
+|.++++.++.+++.+..+.
T Consensus 324 ~i~~l~~~~~~~~~~~~~~~ 343 (358)
T cd03812 324 EILKLKSEDRRERSSESIKK 343 (358)
T ss_pred HHHHHHhCcchhhhhhhhhh
Confidence 99999998876655543333
No 66
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=99.82 E-value=6.6e-19 Score=196.13 Aligned_cols=269 Identities=17% Similarity=0.231 Sum_probs=188.8
Q ss_pred HhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHHHHH
Q 002955 193 MEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLS 272 (863)
Q Consensus 193 ~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~Fl~ 272 (863)
++..+| |+|++|..+...+..+..+. .++++.+.+|-.++....+ ..+ +..+|.+-+.+....+.+..
T Consensus 74 ~~~~~~--dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~------~~~---~~~~~~vi~~s~~~~~~~~~ 141 (355)
T cd03819 74 IREEKV--DIVHARSRAPAWSAYLAARR-TRPPFVTTVHGFYSVNFRY------NAI---MARGDRVIAVSNFIADHIRE 141 (355)
T ss_pred HHHcCC--CEEEECCCchhHHHHHHHHh-cCCCEEEEeCCchhhHHHH------HHH---HHhcCEEEEeCHHHHHHHHH
Confidence 344566 99999988766555554443 3789999999776543311 222 34588887766544443331
Q ss_pred HHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh---CCCeEEEeecCcccccC
Q 002955 273 CCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMDIFKG 349 (863)
Q Consensus 273 ~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~~KG 349 (863)
..+. ...++.++|+|+|...|......+ .....+++++ .++++++++||+...||
T Consensus 142 ----~~~~---------------~~~k~~~i~ngi~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg 199 (355)
T cd03819 142 ----NYGV---------------DPDRIRVIPRGVDLDRFDPGAVPP---ERILALAREWPLPKGKPVILLPGRLTRWKG 199 (355)
T ss_pred ----hcCC---------------ChhhEEEecCCccccccCccccch---HHHHHHHHHcCCCCCceEEEEeeccccccC
Confidence 1121 223567789999998875332211 1122244544 46789999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHH
Q 002955 350 ISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYY 429 (863)
Q Consensus 350 i~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly 429 (863)
+..+++|+..+.+++++++ |+.+|... ..+.+.+++.+.+.+. +..+-+.+.|. .+++..+|
T Consensus 200 ~~~li~~~~~l~~~~~~~~----l~ivG~~~-----~~~~~~~~~~~~~~~~-------~~~~~v~~~g~--~~~~~~~l 261 (355)
T cd03819 200 QEVFIEALARLKKDDPDVH----LLIVGDAQ-----GRRFYYAELLELIKRL-------GLQDRVTFVGH--CSDMPAAY 261 (355)
T ss_pred HHHHHHHHHHHHhcCCCeE----EEEEECCc-----ccchHHHHHHHHHHHc-------CCcceEEEcCC--cccHHHHH
Confidence 9999999999988777665 88888432 2223444444444433 22222345555 67899999
Q ss_pred Hhccceeecc-cccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC---CceEeCCCCHHHHHH
Q 002955 430 VIAECCLVTA-VRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAE 505 (863)
Q Consensus 430 ~~ADv~vvtS-~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al~VnP~d~~~~A~ 505 (863)
+.||++++|| ..||||++.+|||+| +.|+|+|..+|..+.+. .|++++|.|++++++
T Consensus 262 ~~ad~~i~ps~~~e~~~~~l~EA~a~-------------------G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~~ 322 (355)
T cd03819 262 ALADIVVSASTEPEAFGRTAVEAQAM-------------------GRPVIASDHGGARETVRPGETGLLVPPGDAEALAQ 322 (355)
T ss_pred HhCCEEEecCCCCCCCchHHHHHHhc-------------------CCCEEEcCCCCcHHHHhCCCceEEeCCCCHHHHHH
Confidence 9999999999 789999999999999 56799999888877772 489999999999999
Q ss_pred HHHHHhCCCHHHHHHHHHHHhhhhccC
Q 002955 506 AMDSALGVSDAEKQMRHEKHYRYVSTH 532 (863)
Q Consensus 506 ai~~aL~m~~~er~~r~~~~~~~v~~~ 532 (863)
+|..++...++++....++.++++.++
T Consensus 323 ~i~~~~~~~~~~~~~~~~~a~~~~~~~ 349 (355)
T cd03819 323 ALDQILSLLPEGRAKMFAKARMCVETL 349 (355)
T ss_pred HHHHHHhhCHHHHHHHHHHHHHHHHHh
Confidence 999888877788877777777777553
No 67
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=99.82 E-value=1.3e-18 Score=197.23 Aligned_cols=280 Identities=17% Similarity=0.135 Sum_probs=182.4
Q ss_pred CCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHH---------HHHhCCEecccCHHHHHHH
Q 002955 200 DDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLR---------ALLNADLIGFHTFDYARHF 270 (863)
Q Consensus 200 ~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~---------~ll~~dligF~t~~~~~~F 270 (863)
.|+|.+|+..... + +++... ..++.|.+| ||......--.+...+.+ .+-.+|.|-..+......+
T Consensus 95 ~Dvi~~~~~~~~~-~-~~~~~~-~~~~i~~~h--~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~s~~~~~~~ 169 (392)
T cd03805 95 YDVFIVDQVSACV-P-LLKLFS-PSKILFYCH--FPDQLLAQRGSLLKRLYRKPFDWLEEFTTGMADKIVVNSNFTASVF 169 (392)
T ss_pred CCEEEEcCcchHH-H-HHHHhc-CCcEEEEEe--cChHHhcCCCcHHHHHHHHHHHHHHHHHhhCceEEEEcChhHHHHH
Confidence 4999998866432 2 333333 389999999 443321110011111111 1234677766555433333
Q ss_pred HHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCH
Q 002955 271 LSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGI 350 (863)
Q Consensus 271 l~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi 350 (863)
... ++. .....+.++|+|+|.+.|......+ ..+......++.+|+++||+.+.||+
T Consensus 170 ~~~----~~~--------------~~~~~~~vi~n~vd~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~grl~~~Kg~ 226 (392)
T cd03805 170 KKT----FPS--------------LAKNPREVVYPCVDTDSFESTSEDP-----DPGLLIPKSGKKTFLSINRFERKKNI 226 (392)
T ss_pred HHH----hcc--------------cccCCcceeCCCcCHHHcCcccccc-----cccccccCCCceEEEEEeeecccCCh
Confidence 221 110 0111235789999998875321110 11111122567899999999999999
Q ss_pred HHHHHHHHHHHHhC---CCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHH-HhhccCCCCcccEEEEcCCCCHHHHH
Q 002955 351 SLKLLAMEQLLSQN---PSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRR-INKIFGRPGYQPVVLIDTPLQFYERI 426 (863)
Q Consensus 351 ~~~l~A~~~ll~~~---p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~-IN~~~g~~~~~pv~~~~~~v~~~el~ 426 (863)
..+++|++++.++. |+++ |+.+|..... .++..++.+++.+++++ . +...-+.+.|.++.+++.
T Consensus 227 ~~ll~a~~~l~~~~~~~~~~~----l~i~G~~~~~-~~~~~~~~~~l~~~~~~~~-------~l~~~V~f~g~~~~~~~~ 294 (392)
T cd03805 227 ALAIEAFAILKDKLAEFKNVR----LVIAGGYDPR-VAENVEYLEELQRLAEELL-------LLEDQVIFLPSISDSQKE 294 (392)
T ss_pred HHHHHHHHHHHhhcccccCeE----EEEEcCCCCC-CchhHHHHHHHHHHHHHhc-------CCCceEEEeCCCChHHHH
Confidence 99999999998887 6655 8888854311 12223445555555554 2 222345667899999999
Q ss_pred HHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC---CceEeCCCCHHHH
Q 002955 427 AYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAV 503 (863)
Q Consensus 427 aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al~VnP~d~~~~ 503 (863)
.+|+.||++++||..||||++++|||+| +.|+|+|..+|..+.+. .|++++| |++++
T Consensus 295 ~~l~~ad~~l~~s~~E~~g~~~lEAma~-------------------G~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~ 354 (392)
T cd03805 295 LLLSSARALLYTPSNEHFGIVPLEAMYA-------------------GKPVIACNSGGPLETVVDGETGFLCEP-TPEEF 354 (392)
T ss_pred HHHhhCeEEEECCCcCCCCchHHHHHHc-------------------CCCEEEECCCCcHHHhccCCceEEeCC-CHHHH
Confidence 9999999999999999999999999999 56799999988887773 3788877 99999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHhhhh-ccCCHHHHHHH
Q 002955 504 AEAMDSALGVSDAEKQMRHEKHYRYV-STHDVAYWARS 540 (863)
Q Consensus 504 A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~ 540 (863)
|++|.++++.++ .++...++.++++ ..+++..++++
T Consensus 355 a~~i~~l~~~~~-~~~~~~~~a~~~~~~~~s~~~~~~~ 391 (392)
T cd03805 355 AEAMLKLANDPD-LADRMGAAGRKRVKEKFSTEAFAER 391 (392)
T ss_pred HHHHHHHHhChH-HHHHHHHHHHHHHHHhcCHHHHhhh
Confidence 999999998764 4444555566665 44777766654
No 68
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.82 E-value=2.4e-18 Score=193.14 Aligned_cols=286 Identities=15% Similarity=0.150 Sum_probs=192.9
Q ss_pred HHHHHHHHHhhcCCCCCEEEEeCcccchHHHHHHhhCC---CCeEEEEEeCCCCChhHhhcCCC-hHHHHHHHHhCCEec
Q 002955 185 NKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFN---RVKLGFFLHSPFPSSEIYRTLPI-RDELLRALLNADLIG 260 (863)
Q Consensus 185 N~~fa~~i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~---~~~i~~flH~PfP~~e~~r~lp~-r~eil~~ll~~dlig 260 (863)
++.+.+.+ +..+| |+|++|.+....++..+..+.. +.++.+.+|-.-.. ....-+. +.-+...+-.+|.|.
T Consensus 73 ~~~l~~~i-~~~~~--divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~--~~~~~~~~~~~~~~~~~~~d~ii 147 (371)
T cd04962 73 ASKIAEVA-KRYKL--DLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDIT--LVGQDPSFQPATRFSIEKSDGVT 147 (371)
T ss_pred HHHHHHHH-hcCCc--cEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCccc--cccccccchHHHHHHHhhCCEEE
Confidence 34444444 45566 8999998776556666554322 67888888843110 1111121 222334456789998
Q ss_pred ccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh---CCCeE
Q 002955 261 FHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIV 337 (863)
Q Consensus 261 F~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~v 337 (863)
..+......+...+ +..-++.++|+|+|...+... .. ...++++ .++++
T Consensus 148 ~~s~~~~~~~~~~~--------------------~~~~~i~vi~n~~~~~~~~~~-----~~---~~~~~~~~~~~~~~~ 199 (371)
T cd04962 148 AVSESLRQETYELF--------------------DITKEIEVIPNFVDEDRFRPK-----PD---EALKRRLGAPEGEKV 199 (371)
T ss_pred EcCHHHHHHHHHhc--------------------CCcCCEEEecCCcCHhhcCCC-----ch---HHHHHhcCCCCCCeE
Confidence 88887666554311 111246789999998776421 11 1223333 46889
Q ss_pred EEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEc
Q 002955 338 MLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLID 417 (863)
Q Consensus 338 il~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~ 417 (863)
+++++|+.+.||+..+++|++++.++ ++++ |+.+|. +++..++++ ++.+. + ..+.+.+.
T Consensus 200 il~~g~l~~~K~~~~li~a~~~l~~~-~~~~----l~i~G~-----g~~~~~~~~----~~~~~----~---~~~~v~~~ 258 (371)
T cd04962 200 LIHISNFRPVKRIDDVIRIFAKVRKE-VPAR----LLLVGD-----GPERSPAER----LAREL----G---LQDDVLFL 258 (371)
T ss_pred EEEecccccccCHHHHHHHHHHHHhc-CCce----EEEEcC-----CcCHHHHHH----HHHHc----C---CCceEEEe
Confidence 99999999999999999999988665 3344 777773 233333333 33332 1 22223444
Q ss_pred CCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC---CceE
Q 002955 418 TPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIR 494 (863)
Q Consensus 418 ~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al~ 494 (863)
|.. +++..+|+.||++|+||..||||++++|||+| +.|+|+|+.+|..+.+. .|++
T Consensus 259 g~~--~~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~-------------------g~PvI~s~~~~~~e~i~~~~~G~~ 317 (371)
T cd04962 259 GKQ--DHVEELLSIADLFLLPSEKESFGLAALEAMAC-------------------GVPVVASNAGGIPEVVKHGETGFL 317 (371)
T ss_pred cCc--ccHHHHHHhcCEEEeCCCcCCCccHHHHHHHc-------------------CCCEEEeCCCCchhhhcCCCceEE
Confidence 543 57999999999999999999999999999999 56799999999888773 4899
Q ss_pred eCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhh-hccCCHHHHHHHHHHHHH
Q 002955 495 VNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRY-VSTHDVAYWARSFLQDLE 546 (863)
Q Consensus 495 VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~-v~~~~~~~W~~~~l~~l~ 546 (863)
++|.|++++|++|.++++.+ +++....++.+++ ...+++...++++++-++
T Consensus 318 ~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~ 369 (371)
T cd04962 318 VDVGDVEAMAEYALSLLEDD-ELWQEFSRAARNRAAERFDSERIVPQYEALYR 369 (371)
T ss_pred cCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 99999999999999999754 4444445556666 456888888888876554
No 69
>PLN02949 transferase, transferring glycosyl groups
Probab=99.82 E-value=3e-18 Score=197.71 Aligned_cols=314 Identities=13% Similarity=0.139 Sum_probs=204.0
Q ss_pred ccccccccccccCCCCCCCCCCccChhhHHHHHHHHHHHHHHHHhhcCCCCCEEEEeCccc-chHHHHHHhhCCCCeEEE
Q 002955 150 FCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHL-MVLPTFLRKRFNRVKLGF 228 (863)
Q Consensus 150 f~~~~lWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~p~~D~VwvhDyhl-~llp~~lr~~~~~~~i~~ 228 (863)
+-....||-||.+. ..-+..|-++..+.+ +. |.|||----. ..+| ++| +.+.||+|
T Consensus 109 ~~~~~~~~~~t~~~--------~~~~~~~l~~~~~~~---------~~---p~v~vDt~~~~~~~p-l~~--~~~~~v~~ 165 (463)
T PLN02949 109 WIEEETYPRFTMIG--------QSLGSVYLAWEALCK---------FT---PLYFFDTSGYAFTYP-LAR--LFGCKVVC 165 (463)
T ss_pred ccccccCCceehHH--------HHHHHHHHHHHHHHh---------cC---CCEEEeCCCcccHHH-HHH--hcCCcEEE
Confidence 33556688877653 223567777776654 12 3488742111 1222 344 33789999
Q ss_pred EEeCCCCChhHhhcCCCh-------------------HH----H---HH--HHHhCCEecccCHHHHHHHHHHHHhhhCc
Q 002955 229 FLHSPFPSSEIYRTLPIR-------------------DE----L---LR--ALLNADLIGFHTFDYARHFLSCCSRMLGV 280 (863)
Q Consensus 229 flH~PfP~~e~~r~lp~r-------------------~e----i---l~--~ll~~dligF~t~~~~~~Fl~~~~r~lg~ 280 (863)
.+|-|--+.+....+-.+ +. + +. .+-.+|.|-..+....+++.+. .
T Consensus 166 yvH~p~~~~dm~~~v~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~~l~~~~~~~ad~ii~nS~~t~~~l~~~----~-- 239 (463)
T PLN02949 166 YTHYPTISSDMISRVRDRSSMYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVNSSWTKSHIEAL----W-- 239 (463)
T ss_pred EEeCCcchHHHHHHHhhcccccCccchhhccchhHHHHHHHHHHHHHHHHHHcCCCCEEEECCHHHHHHHHHH----c--
Confidence 999665455433221000 00 0 00 1134566665554444444321 1
Q ss_pred eecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCHHHHHHHHHHH
Q 002955 281 SYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQL 360 (863)
Q Consensus 281 ~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~A~~~l 360 (863)
+...++.++++|+|...+... +. ....++.++++|+|+.+.||+..+|+||.++
T Consensus 240 --------------~~~~~i~vvyp~vd~~~~~~~---~~---------~~~~~~~~il~vGR~~~~Kg~~llI~A~~~l 293 (463)
T PLN02949 240 --------------RIPERIKRVYPPCDTSGLQAL---PL---------ERSEDPPYIISVAQFRPEKAHALQLEAFALA 293 (463)
T ss_pred --------------CCCCCeEEEcCCCCHHHcccC---Cc---------cccCCCCEEEEEEeeeccCCHHHHHHHHHHH
Confidence 111245678889998766311 10 0113457899999999999999999999999
Q ss_pred HHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeeccc
Q 002955 361 LSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAV 440 (863)
Q Consensus 361 l~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~ 440 (863)
+++.++-..++.|+++|... .++..++.+++++++++.+ ....+.|.+.++.+++.++|+.||++|.||.
T Consensus 294 ~~~~~~~~~~~~LvIvG~~~---~~~~~~~~~eL~~la~~l~-------L~~~V~f~g~v~~~el~~ll~~a~~~v~~s~ 363 (463)
T PLN02949 294 LEKLDADVPRPKLQFVGSCR---NKEDEERLQKLKDRAKELG-------LDGDVEFHKNVSYRDLVRLLGGAVAGLHSMI 363 (463)
T ss_pred HHhccccCCCcEEEEEeCCC---CcccHHHHHHHHHHHHHcC-------CCCcEEEeCCCCHHHHHHHHHhCcEEEeCCc
Confidence 87543211234599888542 1222334455555555442 2223456688999999999999999999999
Q ss_pred ccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC-C------CceEeCCCCHHHHHHHHHHHhCC
Q 002955 441 RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-S------GAIRVNPWNIDAVAEAMDSALGV 513 (863)
Q Consensus 441 ~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l-~------~al~VnP~d~~~~A~ai~~aL~m 513 (863)
.||||++++|||+| +.|+|++..+|..+.+ . .|++++ |++++|++|.+++++
T Consensus 364 ~E~FGivvlEAMA~-------------------G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~~~la~ai~~ll~~ 422 (463)
T PLN02949 364 DEHFGISVVEYMAA-------------------GAVPIAHNSAGPKMDIVLDEDGQQTGFLAT--TVEEYADAILEVLRM 422 (463)
T ss_pred cCCCChHHHHHHHc-------------------CCcEEEeCCCCCcceeeecCCCCcccccCC--CHHHHHHHHHHHHhC
Confidence 99999999999999 5678999988865333 2 267764 999999999999998
Q ss_pred CHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHHH
Q 002955 514 SDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLERAC 549 (863)
Q Consensus 514 ~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~ 549 (863)
++++++...++.++.+.+++....++++.+.+....
T Consensus 423 ~~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i~~l~ 458 (463)
T PLN02949 423 RETERLEIAAAARKRANRFSEQRFNEDFKDAIRPIL 458 (463)
T ss_pred CHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 877777777777888888999988888887776543
No 70
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=99.81 E-value=4.4e-19 Score=205.65 Aligned_cols=203 Identities=15% Similarity=0.090 Sum_probs=134.0
Q ss_pred hcccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC-CceEEccCcEEEEeCC
Q 002955 589 RTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPNY 667 (863)
Q Consensus 589 ~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~-~l~liaenGa~I~~~~ 667 (863)
.+++|+|++|+||||++ .++.++++++++|+++ +++|+.|++||||+...+..++..+. ..++|++||+.|+.+.
T Consensus 413 ~~~~KLIfsDLDGTLLd---~d~~i~~~t~eAL~~L-~ekGI~~VIATGRs~~~i~~l~~~Lgl~~~~I~eNGA~I~~~~ 488 (694)
T PRK14502 413 GQFKKIVYTDLDGTLLN---PLTYSYSTALDALRLL-KDKELPLVFCSAKTMGEQDLYRNELGIKDPFITENGGAIFIPK 488 (694)
T ss_pred CceeeEEEEECcCCCcC---CCCccCHHHHHHHHHH-HHcCCeEEEEeCCCHHHHHHHHHHcCCCCeEEEcCCCEEEECC
Confidence 46789999999999999 5667778999999998 88999999999999999999987763 3579999999999865
Q ss_pred ce------------eEEeecCCCCccHHHHHHHHHHHHhhcC----------CCceeeeccceeEee----cc-------
Q 002955 668 GV------------DWETCVSVPDFSWKQIAEPVMKLYTETT----------DGSTIETKESALVWN----FQ------- 714 (863)
Q Consensus 668 ~~------------~w~~~~~~~~~~w~~~v~~i~~~y~~~~----------~gs~ie~k~~~l~~~----y~------- 714 (863)
+. .+.......+ .+.++++++...+.. ...++.... ...+. +.
T Consensus 489 ~~~~~~~~~~~~~~~~iI~~~~l~---~e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~-d~~~~ei~~~TgL~~~~a 564 (694)
T PRK14502 489 DYFRLPFAYDRVAGNYLVIELGMA---YKDIRHILKKALAEACTEIENSEKAGNIFITSFG-DMSVEDVSRLTDLNLKQA 564 (694)
T ss_pred CcccccccccccCCCeEEEEcCCC---HHHHHHHHHHHHHhhcceeeeeeccCcEEEecCC-cccHHHHHHhhCCCHHHH
Confidence 41 0000000111 122333333222211 011111110 00000 00
Q ss_pred -cCC-CC----cchhhHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEE--eCC
Q 002955 715 -YAD-PD----FGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCI--GDD 786 (863)
Q Consensus 715 -~~d-~~----~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlai--GD~ 786 (863)
.+. .+ +-.....+.++.+.+.+....+.+..+..++||. +++|||.|+++|++.+ |++.+++++| ||+
T Consensus 565 ~~a~~Re~seKIl~~gd~e~Leel~~~L~~~~l~v~~g~rfleI~-~gvdKG~AL~~L~e~~---gI~~~eViafalGDs 640 (694)
T PRK14502 565 ELAKQREYSETVHIEGDKRSTNIVLNHIQQSGLEYSFGGRFYEVT-GGNDKGKAIKILNELF---RLNFGNIHTFGLGDS 640 (694)
T ss_pred HHHhhccCceeEEEcCCHHHHHHHHHHHHHcCcEEEECCEEEEeC-CCCCHHHHHHHHHHHh---CCCccceEEEEcCCc
Confidence 000 00 0000012334455555554466677799999999 5999999999999999 9999999999 999
Q ss_pred cchHHHHHHhhhhcCCC
Q 002955 787 RSDEDMFEVIKSAAAGP 803 (863)
Q Consensus 787 ~ND~~Mf~~ag~~~~~~ 803 (863)
.||++||+.++.+++++
T Consensus 641 ~NDisMLe~Ag~gVAM~ 657 (694)
T PRK14502 641 ENDYSMLETVDSPILVQ 657 (694)
T ss_pred HhhHHHHHhCCceEEEc
Confidence 99999999999865543
No 71
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=99.81 E-value=1.3e-18 Score=193.27 Aligned_cols=275 Identities=20% Similarity=0.195 Sum_probs=197.7
Q ss_pred cCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChh--Hhhc---CCChHHHHHHHHhCCEecccCHHHHHHH
Q 002955 196 ISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE--IYRT---LPIRDELLRALLNADLIGFHTFDYARHF 270 (863)
Q Consensus 196 ~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e--~~r~---lp~r~eil~~ll~~dligF~t~~~~~~F 270 (863)
.++ |+||+|.+..... +..+.++.+.+|..+|... .+.. ...+..+...+..+|.+.+.+...++.+
T Consensus 84 ~~~--Dii~~~~~~~~~~------~~~~~~~i~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~ 155 (365)
T cd03809 84 LGL--DLLHSPHNTAPLL------RLRGVPVVVTIHDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEATKRDL 155 (365)
T ss_pred cCC--CeeeecccccCcc------cCCCCCEEEEeccchhhhCcccCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHHHH
Confidence 445 9999998887766 4568999999997665321 1111 1123344556677899988887666666
Q ss_pred HHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCH
Q 002955 271 LSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGI 350 (863)
Q Consensus 271 l~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi 350 (863)
.+.. +. ...++.++|+|+|...+.... . .. ........++++|+++||+.+.||+
T Consensus 156 ~~~~----~~---------------~~~~~~vi~~~~~~~~~~~~~----~-~~-~~~~~~~~~~~~i~~~G~~~~~K~~ 210 (365)
T cd03809 156 LRYL----GV---------------PPDKIVVIPLGVDPRFRPPPA----E-AE-VLRALYLLPRPYFLYVGTIEPRKNL 210 (365)
T ss_pred HHHh----Cc---------------CHHHEEeeccccCccccCCCc----h-HH-HHHHhcCCCCCeEEEeCCCccccCH
Confidence 5421 11 123566789999988764211 1 11 1112223567899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHH
Q 002955 351 SLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYV 430 (863)
Q Consensus 351 ~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~ 430 (863)
...++|+..+.+++|+++ |+.+|... .........+ .+. +....+.+.+.++.+++..+|+
T Consensus 211 ~~~l~~~~~~~~~~~~~~----l~i~G~~~----~~~~~~~~~~----~~~-------~~~~~v~~~g~~~~~~~~~~~~ 271 (365)
T cd03809 211 ERLLEAFARLPAKGPDPK----LVIVGKRG----WLNEELLARL----REL-------GLGDRVRFLGYVSDEELAALYR 271 (365)
T ss_pred HHHHHHHHHHHHhcCCCC----EEEecCCc----cccHHHHHHH----HHc-------CCCCeEEECCCCChhHHHHHHh
Confidence 999999999999888655 88887432 1112222222 111 2334567789999999999999
Q ss_pred hccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC-CCceEeCCCCHHHHHHHHHH
Q 002955 431 IAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-SGAIRVNPWNIDAVAEAMDS 509 (863)
Q Consensus 431 ~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l-~~al~VnP~d~~~~A~ai~~ 509 (863)
.||++++||..||+|++++|||+| +.|+|+|+.+|..+.+ .+++.++|.|.++++++|.+
T Consensus 272 ~~d~~l~ps~~e~~~~~~~Ea~a~-------------------G~pvI~~~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~ 332 (365)
T cd03809 272 GARAFVFPSLYEGFGLPVLEAMAC-------------------GTPVIASNISSLPEVAGDAALYFDPLDPEALAAAIER 332 (365)
T ss_pred hhhhhcccchhccCCCCHHHHhcC-------------------CCcEEecCCCCccceecCceeeeCCCCHHHHHHHHHH
Confidence 999999999999999999999999 5678999988877776 56899999999999999999
Q ss_pred HhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHH
Q 002955 510 ALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFL 542 (863)
Q Consensus 510 aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l 542 (863)
+++.+ +.+....+..++++..+++..++++++
T Consensus 333 l~~~~-~~~~~~~~~~~~~~~~~sw~~~~~~~~ 364 (365)
T cd03809 333 LLEDP-ALREELRERGLARAKRFSWEKTARRTL 364 (365)
T ss_pred HhcCH-HHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 98744 445555556667788899999998775
No 72
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.80 E-value=1.8e-18 Score=206.40 Aligned_cols=280 Identities=13% Similarity=0.112 Sum_probs=180.2
Q ss_pred hhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEE-EEeCCCC---ChhHhhcCCChHHHHHHHHhCCEecccC-HHHH-
Q 002955 194 EVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGF-FLHSPFP---SSEIYRTLPIRDELLRALLNADLIGFHT-FDYA- 267 (863)
Q Consensus 194 ~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~-flH~PfP---~~e~~r~lp~r~eil~~ll~~dligF~t-~~~~- 267 (863)
+..+| |+|++|.+.-.++..+..+.. ++|+.+ .+|. +| ..+.++. ....+.+.+..++.+.+-+ .++.
T Consensus 397 k~~kp--DIVH~h~~~a~~lg~lAa~~~-gvPvIv~t~h~-~~~~~~~~~~~~--~~~~l~~~l~~~~~~i~Vs~S~~~~ 470 (694)
T PRK15179 397 RSSVP--SVVHIWQDGSIFACALAALLA-GVPRIVLSVRT-MPPVDRPDRYRV--EYDIIYSELLKMRGVALSSNSQFAA 470 (694)
T ss_pred HHcCC--cEEEEeCCcHHHHHHHHHHHc-CCCEEEEEeCC-CccccchhHHHH--HHHHHHHHHHhcCCeEEEeCcHHHH
Confidence 34456 999999998777666665443 456554 4564 32 2221110 0111223333344332222 2222
Q ss_pred HHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh-CCCeEEEeecCccc
Q 002955 268 RHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF-KGQIVMLGVDDMDI 346 (863)
Q Consensus 268 ~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~~~vil~Vdrld~ 346 (863)
+.+.. . +.....+|.++|+|||...|.. .+........++... .+..+|++|+|+++
T Consensus 471 ~~l~~----~---------------~g~~~~kI~VI~NGVd~~~f~~---~~~~~~~~~~~~~~~~~~~~vIg~VGRL~~ 528 (694)
T PRK15179 471 HRYAD----W---------------LGVDERRIPVVYNGLAPLKSVQ---DDACTAMMAQFDARTSDARFTVGTVMRVDD 528 (694)
T ss_pred HHHHH----H---------------cCCChhHEEEECCCcCHHhcCC---CchhhHHHHhhccccCCCCeEEEEEEeCCc
Confidence 22221 1 1122346788999999887742 122221122222222 34678999999999
Q ss_pred ccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHH
Q 002955 347 FKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERI 426 (863)
Q Consensus 347 ~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~ 426 (863)
.||+..+++||.++++++|+++ |+++|. |+. ++++++++++. +....+.|.|.. .++.
T Consensus 529 ~KG~~~LI~A~a~l~~~~p~~~----LvIvG~-----G~~----~~~L~~l~~~l-------gL~~~V~flG~~--~dv~ 586 (694)
T PRK15179 529 NKRPFLWVEAAQRFAASHPKVR----FIMVGG-----GPL----LESVREFAQRL-------GMGERILFTGLS--RRVG 586 (694)
T ss_pred cCCHHHHHHHHHHHHHHCcCeE----EEEEcc-----Ccc----hHHHHHHHHHc-------CCCCcEEEcCCc--chHH
Confidence 9999999999999999999876 888884 333 23344444444 233455677765 4799
Q ss_pred HHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC---CceEeCCCCH--H
Q 002955 427 AYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNI--D 501 (863)
Q Consensus 427 aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al~VnP~d~--~ 501 (863)
.+|+.||++|+||.+|||+++++|||+| +.|+|+|...|+.+.+. .|++|+|.|. +
T Consensus 587 ~ll~aaDv~VlpS~~Egfp~vlLEAMA~-------------------G~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~ 647 (694)
T PRK15179 587 YWLTQFNAFLLLSRFEGLPNVLIEAQFS-------------------GVPVVTTLAGGAGEAVQEGVTGLTLPADTVTAP 647 (694)
T ss_pred HHHHhcCEEEeccccccchHHHHHHHHc-------------------CCeEEEECCCChHHHccCCCCEEEeCCCCCChH
Confidence 9999999999999999999999999999 56799999988888883 4899998875 6
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHhhhh-ccCCHHHHHHHHHH
Q 002955 502 AVAEAMDSALGVSDAEKQMRHEKHYRYV-STHDVAYWARSFLQ 543 (863)
Q Consensus 502 ~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~ 543 (863)
+++++|.+++........ ..++.++++ ..+++...++++++
T Consensus 648 ~La~aL~~ll~~l~~~~~-l~~~ar~~a~~~FS~~~~~~~~~~ 689 (694)
T PRK15179 648 DVAEALARIHDMCAADPG-IARKAADWASARFSLNQMIASTVR 689 (694)
T ss_pred HHHHHHHHHHhChhccHH-HHHHHHHHHHHhCCHHHHHHHHHH
Confidence 899999988865433222 234455555 46787777776654
No 73
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=99.80 E-value=7e-18 Score=187.48 Aligned_cols=268 Identities=16% Similarity=0.154 Sum_probs=190.3
Q ss_pred hhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHHHHHH
Q 002955 194 EVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSC 273 (863)
Q Consensus 194 ~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~Fl~~ 273 (863)
+..++ |+|++|..+...+..++..+....+..+.+|.+-..... ....+.+.+-.+|.+-..+....+.+.+.
T Consensus 76 ~~~~~--Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~vi~~s~~~~~~l~~~ 148 (355)
T cd03799 76 RRLGI--DHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRSP-----DAIDLDEKLARADFVVAISEYNRQQLIRL 148 (355)
T ss_pred HhcCC--CEEEECCCCchHHHHHHHHHhcCCCEEEEEecccccccC-----chHHHHHHHhhCCEEEECCHHHHHHHHHh
Confidence 34455 999999877666666666666678999999954211111 11233445567999988888776665441
Q ss_pred HHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCHHHH
Q 002955 274 CSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLK 353 (863)
Q Consensus 274 ~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~ 353 (863)
.+ ....++.++|+|+|...+.... .....++..|+++||+.+.||+..+
T Consensus 149 ----~~---------------~~~~~~~vi~~~~d~~~~~~~~------------~~~~~~~~~i~~~g~~~~~k~~~~l 197 (355)
T cd03799 149 ----LG---------------CDPDKIHVVHCGVDLERFPPRP------------PPPPGEPLRILSVGRLVEKKGLDYL 197 (355)
T ss_pred ----cC---------------CCcccEEEEeCCcCHHHcCCcc------------ccccCCCeEEEEEeeeccccCHHHH
Confidence 01 2234677899999988775221 1122456789999999999999999
Q ss_pred HHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcc
Q 002955 354 LLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAE 433 (863)
Q Consensus 354 l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~AD 433 (863)
++|++++.+++|+++ |+.+|.. +...++ .+.+.+. +..+.+.+.|.++.+|+.++|+.||
T Consensus 198 ~~~~~~l~~~~~~~~----l~i~G~~-----~~~~~~----~~~~~~~-------~~~~~v~~~g~~~~~~l~~~~~~ad 257 (355)
T cd03799 198 LEALALLKDRGIDFR----LDIVGDG-----PLRDEL----EALIAEL-------GLEDRVTLLGAKSQEEVRELLRAAD 257 (355)
T ss_pred HHHHHHHhhcCCCeE----EEEEECC-----ccHHHH----HHHHHHc-------CCCCeEEECCcCChHHHHHHHHhCC
Confidence 999999988767654 8877732 222233 3333333 2334567788999999999999999
Q ss_pred ceeecccc------cCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC---CceEeCCCCHHHHH
Q 002955 434 CCLVTAVR------DGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVA 504 (863)
Q Consensus 434 v~vvtS~~------EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al~VnP~d~~~~A 504 (863)
++++||.. ||||++.+|||+| +.|+|+|..+|..+.+. .|++++|.|+++++
T Consensus 258 i~l~~s~~~~~~~~e~~~~~~~Ea~a~-------------------G~Pvi~~~~~~~~~~i~~~~~g~~~~~~~~~~l~ 318 (355)
T cd03799 258 LFVLPSVTAADGDREGLPVVLMEAMAM-------------------GLPVISTDVSGIPELVEDGETGLLVPPGDPEALA 318 (355)
T ss_pred EEEecceecCCCCccCccHHHHHHHHc-------------------CCCEEecCCCCcchhhhCCCceEEeCCCCHHHHH
Confidence 99999999 9999999999999 56789998877776662 48999999999999
Q ss_pred HHHHHHhCCCHHHHHHHHHHHhhhhc-cCCHHHHHH
Q 002955 505 EAMDSALGVSDAEKQMRHEKHYRYVS-THDVAYWAR 539 (863)
Q Consensus 505 ~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~ 539 (863)
++|.++++.+.. +....+..++++. .+++...++
T Consensus 319 ~~i~~~~~~~~~-~~~~~~~a~~~~~~~~s~~~~~~ 353 (355)
T cd03799 319 DAIERLLDDPEL-RREMGEAGRARVEEEFDIRKQAA 353 (355)
T ss_pred HHHHHHHhCHHH-HHHHHHHHHHHHHHhcCHHHHhh
Confidence 999999987644 4444445555553 466655544
No 74
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.80 E-value=2e-18 Score=197.47 Aligned_cols=356 Identities=15% Similarity=0.165 Sum_probs=205.1
Q ss_pred cccccccccCCCCCCCCCCccChhhHHHHHH--HHHHHHHHHHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEE
Q 002955 153 QHLWPLFHYMLPLSPDLGGRFDRSLWQAYVS--VNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFL 230 (863)
Q Consensus 153 ~~lWpl~H~~~~~~~~~~~~~~~~~w~~Y~~--vN~~fa~~i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~fl 230 (863)
.-||-.|+--.+ ..+..+++..-=.|.. +=..|+..+. ....|+++.||++.-....+||++.+.++..|+.
T Consensus 106 ~~lW~~~~i~s~---~~~~d~nea~~fgy~~~~~i~~~~~~~~---~~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTt 179 (590)
T cd03793 106 GELWELCGIGSP---EGDRETNDAIIFGFLVAWFLGEFAEQFD---DEPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTT 179 (590)
T ss_pred HHHHHHcCCCCC---CCCCcchHHHHHHHHHHHHHHHHHhhcc---CCCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEe
Confidence 458999886532 2223444433333421 1122333211 1135999999999999999999888999999999
Q ss_pred eCCCCChhHhhcCCCh-HHHHHHHHhCCEecccC-------HHHHHHHHHH-----HHhhhCceecccCceeeEEEcCeE
Q 002955 231 HSPFPSSEIYRTLPIR-DELLRALLNADLIGFHT-------FDYARHFLSC-----CSRMLGVSYQSKRGYIGLEYFGRT 297 (863)
Q Consensus 231 H~PfP~~e~~r~lp~r-~eil~~ll~~dligF~t-------~~~~~~Fl~~-----~~r~lg~~~~~~~~~~~~~~~gr~ 297 (863)
| +++.-|.|--. ..+-. ++-.|.- .-+.++.++. +.++..++....+. ....+++.
T Consensus 180 H----AT~~GR~l~~g~~~~y~-----~l~~~~~d~eA~~~~I~~r~~iE~~aa~~Ad~fttVS~it~~E--~~~Ll~~~ 248 (590)
T cd03793 180 H----ATLLGRYLCAGNVDFYN-----NLDYFDVDKEAGKRGIYHRYCIERAAAHCAHVFTTVSEITAYE--AEHLLKRK 248 (590)
T ss_pred c----ccccccccccCCcccch-----hhhhcchhhhhhcccchHHHHHHHHHHhhCCEEEECChHHHHH--HHHHhCCC
Confidence 9 55555532110 00000 0000000 0022232221 11222111111110 01223444
Q ss_pred EEEEEeccccCchHHHhhcCC----chHHHHHHH-----HHHHh---CCCeEEEe-ecCccc-ccCHHHHHHHHHHHHHh
Q 002955 298 VSIKILPVGIHIGQLQSVLNL----PETEAKVAE-----LQDQF---KGQIVMLG-VDDMDI-FKGISLKLLAMEQLLSQ 363 (863)
Q Consensus 298 ~~i~v~p~GId~~~~~~~~~~----~~~~~~~~~-----l~~~~---~~~~vil~-Vdrld~-~KGi~~~l~A~~~ll~~ 363 (863)
..+ |+|+|||+..|...... ....+++.+ ++.+| .+++++++ +||+++ .||++.+|+|+.++-..
T Consensus 249 pd~-ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~~~~~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~ 327 (590)
T cd03793 249 PDV-VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYGHYDFDLDKTLYFFTAGRYEFSNKGADMFLEALARLNYL 327 (590)
T ss_pred CCE-EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHHHhhhcCCCCCCeEEEEEeeccccccCCHHHHHHHHHHHHHH
Confidence 333 89999999998643110 011122222 34544 36788888 799999 99999999999987542
Q ss_pred CCC-CCCceEEEEEecCCCCCc---------hhHHHHHHHHHHHHHHHhhc-----------------------------
Q 002955 364 NPS-KRGKIVLVQIANPARGRG---------RDVQEVQSETHATVRRINKI----------------------------- 404 (863)
Q Consensus 364 ~p~-~~~~vvLvqi~~p~r~~~---------~~~~~~~~~v~~l~~~IN~~----------------------------- 404 (863)
-.. -.++.|+..|..|+...+ .-.+++++.+.++..+|..+
T Consensus 328 l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~ 407 (590)
T cd03793 328 LKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRI 407 (590)
T ss_pred HHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHH
Confidence 111 112334444545664332 22344555566665555555
Q ss_pred ---------------------------------cCC-CCcccEEEEcCCCC------HHHHHHHHHhccceeecccccCC
Q 002955 405 ---------------------------------FGR-PGYQPVVLIDTPLQ------FYERIAYYVIAECCLVTAVRDGM 444 (863)
Q Consensus 405 ---------------------------------~g~-~~~~pv~~~~~~v~------~~el~aly~~ADv~vvtS~~EGm 444 (863)
|.. .+...|+|....++ ..+...+|+.||+||+||.+|||
T Consensus 408 ~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g~dl~v~PS~yE~f 487 (590)
T cd03793 408 FALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRGCHLGVFPSYYEPW 487 (590)
T ss_pred HhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhhceEEEeccccCCC
Confidence 100 12334554433332 23578899999999999999999
Q ss_pred CccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCc----ccCC----CceEeC-------CCCHHHHHHHHHH
Q 002955 445 NLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCS----PSLS----GAIRVN-------PWNIDAVAEAMDS 509 (863)
Q Consensus 445 nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~----~~l~----~al~Vn-------P~d~~~~A~ai~~ 509 (863)
|++++||||| +.|+|+|..+|.. +.+. .|+.|. |.+++++|++|.+
T Consensus 488 G~~~lEAma~-------------------G~PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~ 548 (590)
T cd03793 488 GYTPAECTVM-------------------GIPSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQQLTQYMYE 548 (590)
T ss_pred CcHHHHHHHc-------------------CCCEEEccCcchhhhhHHHhccCCCceEEEecCCccchHHHHHHHHHHHHH
Confidence 9999999999 6779999999984 3332 378887 5667899999999
Q ss_pred HhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHH
Q 002955 510 ALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDL 545 (863)
Q Consensus 510 aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 545 (863)
.++++..++........+.....+|.+-+..+++.-
T Consensus 549 ~~~~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~ 584 (590)
T cd03793 549 FCQLSRRQRIIQRNRTERLSDLLDWRNLGRYYRKAR 584 (590)
T ss_pred HhCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 987764444333333335556677777776665543
No 75
>PRK10307 putative glycosyl transferase; Provisional
Probab=99.80 E-value=1.2e-17 Score=191.42 Aligned_cols=282 Identities=16% Similarity=0.147 Sum_probs=190.7
Q ss_pred CEEEEeCcccchH-HHHHHhhCCCCeEEEEEeCCCCChhHhhc-C--CChH----HHHH-HHHhCCEecccCHHHHHHHH
Q 002955 201 DFVWVHDYHLMVL-PTFLRKRFNRVKLGFFLHSPFPSSEIYRT-L--PIRD----ELLR-ALLNADLIGFHTFDYARHFL 271 (863)
Q Consensus 201 D~VwvhDyhl~ll-p~~lr~~~~~~~i~~flH~PfP~~e~~r~-l--p~r~----eil~-~ll~~dligF~t~~~~~~Fl 271 (863)
|+|++|...+... ..++-++.-++++.+.+|--||..-.-.. . +... .+.+ .+-.+|.|...+....+.+.
T Consensus 108 Div~~~~p~~~~~~~~~~~~~~~~~~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~ 187 (412)
T PRK10307 108 DRVIGVVPTLFCAPGARLLARLSGARTWLHIQDYEVDAAFGLGLLKGGKVARLATAFERSLLRRFDNVSTISRSMMNKAR 187 (412)
T ss_pred CEEEEeCCcHHHHHHHHHHHHhhCCCEEEEeccCCHHHHHHhCCccCcHHHHHHHHHHHHHHhhCCEEEecCHHHHHHHH
Confidence 9999997655432 23333334457888888866653211100 1 0001 1111 23357888887776666553
Q ss_pred HHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh---CCCeEEEeecCccccc
Q 002955 272 SCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMDIFK 348 (863)
Q Consensus 272 ~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~~K 348 (863)
+ .+ ....++.++|+|||.+.|..... .....+++++ .++++|+++||+.+.|
T Consensus 188 ~-----~~---------------~~~~~i~vi~ngvd~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~G~l~~~k 242 (412)
T PRK10307 188 E-----KG---------------VAAEKVIFFPNWSEVARFQPVAD-----ADVDALRAQLGLPDGKKIVLYSGNIGEKQ 242 (412)
T ss_pred H-----cC---------------CCcccEEEECCCcCHhhcCCCCc-----cchHHHHHHcCCCCCCEEEEEcCcccccc
Confidence 2 11 12345778999999988753211 1123355555 4568999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHH
Q 002955 349 GISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAY 428 (863)
Q Consensus 349 Gi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~al 428 (863)
|+..+++|++++ +++|+++ |+++|. |+..++ +++++++. +...| .+.|.++.+++..+
T Consensus 243 g~~~li~a~~~l-~~~~~~~----l~ivG~-----g~~~~~----l~~~~~~~-------~l~~v-~f~G~~~~~~~~~~ 300 (412)
T PRK10307 243 GLELVIDAARRL-RDRPDLI----FVICGQ-----GGGKAR----LEKMAQCR-------GLPNV-HFLPLQPYDRLPAL 300 (412)
T ss_pred CHHHHHHHHHHh-ccCCCeE----EEEECC-----ChhHHH----HHHHHHHc-------CCCce-EEeCCCCHHHHHHH
Confidence 999999999876 4556554 888873 343333 33343333 12234 45678999999999
Q ss_pred HHhccceeecccccCCCcc----ceeeeeeecCCcccccccCCCCCCCCCccEEecccccC--cccC-CCceEeCCCCHH
Q 002955 429 YVIAECCLVTAVRDGMNLI----PYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGC--SPSL-SGAIRVNPWNID 501 (863)
Q Consensus 429 y~~ADv~vvtS~~EGmnLv----~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~--~~~l-~~al~VnP~d~~ 501 (863)
|+.||++|+||..|+++++ .+|||+| +.|+|+|..+|. .+.+ ..|++++|.|++
T Consensus 301 ~~~aDi~v~ps~~e~~~~~~p~kl~eama~-------------------G~PVi~s~~~g~~~~~~i~~~G~~~~~~d~~ 361 (412)
T PRK10307 301 LKMADCHLLPQKAGAADLVLPSKLTNMLAS-------------------GRNVVATAEPGTELGQLVEGIGVCVEPESVE 361 (412)
T ss_pred HHhcCEeEEeeccCcccccCcHHHHHHHHc-------------------CCCEEEEeCCCchHHHHHhCCcEEeCCCCHH
Confidence 9999999999999996554 5899999 567889888774 2434 569999999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHhhhhc-cCCHHHHHHHHHHHHHHHH
Q 002955 502 AVAEAMDSALGVSDAEKQMRHEKHYRYVS-THDVAYWARSFLQDLERAC 549 (863)
Q Consensus 502 ~~A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~l~~l~~~~ 549 (863)
++|++|.++++++ +++....++.++++. .+++...+++|++.+++..
T Consensus 362 ~la~~i~~l~~~~-~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~ 409 (412)
T PRK10307 362 ALVAAIAALARQA-LLRPKLGTVAREYAERTLDKENVLRQFIADIRGLV 409 (412)
T ss_pred HHHHHHHHHHhCH-HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh
Confidence 9999999998764 455555666777775 5899999999988887653
No 76
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.80 E-value=3e-18 Score=195.97 Aligned_cols=293 Identities=10% Similarity=0.049 Sum_probs=183.9
Q ss_pred HHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeE-EEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHHH
Q 002955 192 VMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKL-GFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHF 270 (863)
Q Consensus 192 i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i-~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~F 270 (863)
++...+| |+|+.|++.-.++..+..... .+++ ....|. ++....-+.+-... ..+..++++--.+. +..+.
T Consensus 275 ~ir~~rp--DIVHt~~~~a~l~g~laA~la-gvpviv~~~h~-~~~~~~~r~~~~e~---~~~~~a~~i~~~sd-~v~~s 346 (578)
T PRK15490 275 HLCERKL--DYLSVWQDGACLMIALAALIA-GVPRIQLGLRG-LPPVVRKRLFKPEY---EPLYQALAVVPGVD-FMSNN 346 (578)
T ss_pred HHHHcCC--CEEEEcCcccHHHHHHHHHhc-CCCEEEEeecc-cCCcchhhHHHHHH---HHhhhhceeEecch-hhhcc
Confidence 4455577 999999999766655554433 4555 444565 33221111110000 12333444332222 33222
Q ss_pred HHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh-CCCeEEEeecCcccccC
Q 002955 271 LSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF-KGQIVMLGVDDMDIFKG 349 (863)
Q Consensus 271 l~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~~~vil~Vdrld~~KG 349 (863)
....+.+.. .++-...+|.++|+|||+..|......+ ......++..+ .+..+|++|+|+.+.||
T Consensus 347 ~~v~~~l~~------------~lgip~~KI~VIyNGVD~~rf~p~~~~~--~~~r~~~~~~l~~~~~vIg~VgRl~~~Kg 412 (578)
T PRK15490 347 HCVTRHYAD------------WLKLEAKHFQVVYNGVLPPSTEPSSEVP--HKIWQQFTQKTQDADTTIGGVFRFVGDKN 412 (578)
T ss_pred HHHHHHHHH------------HhCCCHHHEEEEeCCcchhhcCccchhh--HHHHHHhhhccCCCCcEEEEEEEEehhcC
Confidence 221121100 0112334678899999998886432111 11122222223 34568899999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHH
Q 002955 350 ISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYY 429 (863)
Q Consensus 350 i~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly 429 (863)
....++|+.++++++|+++ |+++|. |+.. +++++++++. +...-+.|.|. .+++..+|
T Consensus 413 ~~~LI~A~a~llk~~pdir----LvIVGd-----G~~~----eeLk~la~el-------gL~d~V~FlG~--~~Dv~~~L 470 (578)
T PRK15490 413 PFAWIDFAARYLQHHPATR----FVLVGD-----GDLR----AEAQKRAEQL-------GILERILFVGA--SRDVGYWL 470 (578)
T ss_pred HHHHHHHHHHHHhHCCCeE----EEEEeC-----chhH----HHHHHHHHHc-------CCCCcEEECCC--hhhHHHHH
Confidence 9999999999999999876 888883 3332 3444444443 22233455555 56899999
Q ss_pred HhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC-C--CceEeCCCCHHHHHHH
Q 002955 430 VIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-S--GAIRVNPWNIDAVAEA 506 (863)
Q Consensus 430 ~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l-~--~al~VnP~d~~~~A~a 506 (863)
+.||+||+||.+||||++++|||+| +.|+|+|..+|+.+.+ + +|++|+|.|+++++++
T Consensus 471 aaADVfVlPS~~EGfp~vlLEAMA~-------------------GlPVVATdvGG~~EiV~dG~nG~LVp~~D~~aLa~a 531 (578)
T PRK15490 471 QKMNVFILFSRYEGLPNVLIEAQMV-------------------GVPVISTPAGGSAECFIEGVSGFILDDAQTVNLDQA 531 (578)
T ss_pred HhCCEEEEcccccCccHHHHHHHHh-------------------CCCEEEeCCCCcHHHcccCCcEEEECCCChhhHHHH
Confidence 9999999999999999999999999 5679999999988877 2 4899999999999998
Q ss_pred HHHHhCCCH--HHHHHHHHHHhhhhc-cCCHHHHHHHHHHHHHH
Q 002955 507 MDSALGVSD--AEKQMRHEKHYRYVS-THDVAYWARSFLQDLER 547 (863)
Q Consensus 507 i~~aL~m~~--~er~~r~~~~~~~v~-~~~~~~W~~~~l~~l~~ 547 (863)
+..+..+.. .++....++.++++. .+++...++.+++-+..
T Consensus 532 i~lA~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 532 CRYAEKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 854433221 222233455677664 58888888888766543
No 77
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=99.80 E-value=7.3e-18 Score=185.24 Aligned_cols=283 Identities=19% Similarity=0.169 Sum_probs=200.4
Q ss_pred HHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhh----cCCChHHHHHHHHhCCEecccCHHHH
Q 002955 192 VMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYR----TLPIRDELLRALLNADLIGFHTFDYA 267 (863)
Q Consensus 192 i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r----~lp~r~eil~~ll~~dligF~t~~~~ 267 (863)
+.+..++ |+|++|+++...+.. +..+.++.++.+.+|.++|...... ...........+..+|.+-+.+....
T Consensus 80 ~~~~~~~--Dii~~~~~~~~~~~~-~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~ 156 (374)
T cd03801 80 LLRRERF--DVVHAHDWLALLAAA-LAARLLGIPLVLTVHGLEFGRPGNELGLLLKLARALERRALRRADRIIAVSEATR 156 (374)
T ss_pred HhhhcCC--cEEEEechhHHHHHH-HHHHhcCCcEEEEeccchhhccccchhHHHHHHHHHHHHHHHhCCEEEEecHHHH
Confidence 3444455 999999999888776 4455668999999999887543211 00111222334456788888777666
Q ss_pred HHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHH---hCCCeEEEeecCc
Q 002955 268 RHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQ---FKGQIVMLGVDDM 344 (863)
Q Consensus 268 ~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~---~~~~~vil~Vdrl 344 (863)
..+.+. +.....++.++|+|++...+... + ...+.. ..+++.++++||+
T Consensus 157 ~~~~~~-------------------~~~~~~~~~~i~~~~~~~~~~~~---~------~~~~~~~~~~~~~~~i~~~g~~ 208 (374)
T cd03801 157 EELREL-------------------GGVPPEKITVIPNGVDTERFRPA---P------RAARRRLGIPEDEPVILFVGRL 208 (374)
T ss_pred HHHHhc-------------------CCCCCCcEEEecCcccccccCcc---c------hHHHhhcCCcCCCeEEEEecch
Confidence 655431 01112467788999998876421 1 111111 1456889999999
Q ss_pred ccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHH
Q 002955 345 DIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYE 424 (863)
Q Consensus 345 d~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~e 424 (863)
++.||+..+++|+..+.+++|+++ |+.+|. ++....+++. +++. +..+-+.+.+.++.+|
T Consensus 209 ~~~k~~~~~i~~~~~~~~~~~~~~----l~i~G~-----~~~~~~~~~~----~~~~-------~~~~~v~~~g~~~~~~ 268 (374)
T cd03801 209 VPRKGVDLLLEALAKLRKEYPDVR----LVIVGD-----GPLREELEAL----AAEL-------GLGDRVTFLGFVPDED 268 (374)
T ss_pred hhhcCHHHHHHHHHHHhhhcCCeE----EEEEeC-----cHHHHHHHHH----HHHh-------CCCcceEEEeccChhh
Confidence 999999999999999988887655 887772 2333333333 2222 1223456678999999
Q ss_pred HHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC---CceEeCCCCHH
Q 002955 425 RIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNID 501 (863)
Q Consensus 425 l~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al~VnP~d~~ 501 (863)
+..+|+.||++++|+..||+|++++|||+| |.|+|++...|..+.+. .|+++++.|++
T Consensus 269 ~~~~~~~~di~i~~~~~~~~~~~~~Ea~~~-------------------g~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~ 329 (374)
T cd03801 269 LPALYAAADVFVLPSLYEGFGLVLLEAMAA-------------------GLPVVASDVGGIPEVVEDGETGLLVPPGDPE 329 (374)
T ss_pred HHHHHHhcCEEEecchhccccchHHHHHHc-------------------CCcEEEeCCCChhHHhcCCcceEEeCCCCHH
Confidence 999999999999999999999999999999 56799999988888874 48999999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHh-hhhccCCHHHHHHHHHHHH
Q 002955 502 AVAEAMDSALGVSDAEKQMRHEKHY-RYVSTHDVAYWARSFLQDL 545 (863)
Q Consensus 502 ~~A~ai~~aL~m~~~er~~r~~~~~-~~v~~~~~~~W~~~~l~~l 545 (863)
+++++|.++++.++..+ ...+..+ .....+++..+++.+++.+
T Consensus 330 ~l~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (374)
T cd03801 330 ALAEAILRLLDDPELRR-RLGEAARERVAERFSWDRVAARTEEVY 373 (374)
T ss_pred HHHHHHHHHHcChHHHH-HHHHHHHHHHHHhcCHHHHHHHHHHhh
Confidence 99999999998664433 3334444 4567789999988877643
No 78
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=99.80 E-value=6.4e-18 Score=187.24 Aligned_cols=274 Identities=18% Similarity=0.223 Sum_probs=181.3
Q ss_pred CCEEEEeCcc-cchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHH------HHHHHhCCEecccCHHHHHHHHH
Q 002955 200 DDFVWVHDYH-LMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDEL------LRALLNADLIGFHTFDYARHFLS 272 (863)
Q Consensus 200 ~D~VwvhDyh-l~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~ei------l~~ll~~dligF~t~~~~~~Fl~ 272 (863)
.|+|++|+.. ....+.....+..+.++.+..|-.++....... +.+..+ ...+-.+|.+.+.+.........
T Consensus 88 ~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~ 166 (375)
T cd03821 88 ADIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGMLDPWALPHK-ALKKRLAWFLFERRLLQAAAAVHATSEQEAAEIRR 166 (375)
T ss_pred CCEEEEecccchHHHHHHHHHHHhCCCEEEEccccccccccccc-hhhhHHHHHHHHHHHHhcCCEEEECCHHHHHHHHh
Confidence 3999999843 322332222233478899999976654331000 011110 11223456666555333322211
Q ss_pred HHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh---CCCeEEEeecCcccccC
Q 002955 273 CCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMDIFKG 349 (863)
Q Consensus 273 ~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~~KG 349 (863)
.+...++.++|+|+|.+.+... +.... ++.+ .++.+++++||+++.||
T Consensus 167 ---------------------~~~~~~~~vi~~~~~~~~~~~~---~~~~~-----~~~~~~~~~~~~i~~~G~~~~~K~ 217 (375)
T cd03821 167 ---------------------LGLKAPIAVIPNGVDIPPFAAL---PSRGR-----RRKFPILPDKRIILFLGRLHPKKG 217 (375)
T ss_pred ---------------------hCCcccEEEcCCCcChhccCcc---hhhhh-----hhhccCCCCCcEEEEEeCcchhcC
Confidence 1223467789999999877532 11111 2222 46789999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHH
Q 002955 350 ISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYY 429 (863)
Q Consensus 350 i~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly 429 (863)
+..+++|+.++.+++|+++ |+.+|... .. +. ..+..++.+. +..+.+.+.|.++.+++..+|
T Consensus 218 ~~~li~a~~~l~~~~~~~~----l~i~G~~~---~~-~~---~~~~~~~~~~-------~~~~~v~~~g~~~~~~~~~~~ 279 (375)
T cd03821 218 LDLLIEAFAKLAERFPDWH----LVIAGPDE---GG-YR---AELKQIAAAL-------GLEDRVTFTGMLYGEDKAAAL 279 (375)
T ss_pred HHHHHHHHHHhhhhcCCeE----EEEECCCC---cc-hH---HHHHHHHHhc-------CccceEEEcCCCChHHHHHHH
Confidence 9999999999999888876 88887422 11 11 2222222222 233455678899999999999
Q ss_pred HhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC-C-ceEeCCCCHHHHHHHH
Q 002955 430 VIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS-G-AIRVNPWNIDAVAEAM 507 (863)
Q Consensus 430 ~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~-~-al~VnP~d~~~~A~ai 507 (863)
+.||++|+||..||||++++|||+| |.|+|+|..+|..+.+. + ++++ |.+.++++++|
T Consensus 280 ~~adv~v~ps~~e~~~~~~~Eama~-------------------G~PvI~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i 339 (375)
T cd03821 280 ADADLFVLPSHSENFGIVVAEALAC-------------------GTPVVTTDKVPWQELIEYGCGWVV-DDDVDALAAAL 339 (375)
T ss_pred hhCCEEEeccccCCCCcHHHHHHhc-------------------CCCEEEcCCCCHHHHhhcCceEEe-CCChHHHHHHH
Confidence 9999999999999999999999999 56799999988887773 3 4555 55679999999
Q ss_pred HHHhCCCHHHHHHHHHHHhhh-hccCCHHHHHHHHH
Q 002955 508 DSALGVSDAEKQMRHEKHYRY-VSTHDVAYWARSFL 542 (863)
Q Consensus 508 ~~aL~m~~~er~~r~~~~~~~-v~~~~~~~W~~~~l 542 (863)
.++++++ +++....++.+++ ...+++...++.++
T Consensus 340 ~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 374 (375)
T cd03821 340 RRALELP-QRLKAMGENGRALVEERFSWTAIAQQLL 374 (375)
T ss_pred HHHHhCH-HHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 9999887 5555556666666 46677777777654
No 79
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=99.79 E-value=6.9e-18 Score=187.54 Aligned_cols=283 Identities=18% Similarity=0.178 Sum_probs=189.2
Q ss_pred HhhcCCCCCEEEEeCcc-c---chHHHHHH-hhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHH
Q 002955 193 MEVISPDDDFVWVHDYH-L---MVLPTFLR-KRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYA 267 (863)
Q Consensus 193 ~~~~~p~~D~VwvhDyh-l---~llp~~lr-~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~ 267 (863)
+...+| |+|.+|+++ + +......+ .+..+.++.+.+|.+.|...... ...-...-+-.+|.|-+.+.+.+
T Consensus 72 ~~~~~~--dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~---~~~~~~~~~~~~d~ii~~s~~~~ 146 (366)
T cd03822 72 IRLSGP--DVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLHEPRPG---DRALLRLLLRRADAVIVMSSELL 146 (366)
T ss_pred HhhcCC--CEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCccccchh---hhHHHHHHHhcCCEEEEeeHHHH
Confidence 344455 899998733 2 11111111 12357899999998622221111 01112223445898888865555
Q ss_pred HHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccc
Q 002955 268 RHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIF 347 (863)
Q Consensus 268 ~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~ 347 (863)
++++... ...++.++|+|++...+... .. .++ .....++.+|+++||+.+.
T Consensus 147 ~~~~~~~---------------------~~~~~~~i~~~~~~~~~~~~-----~~--~~~-~~~~~~~~~i~~~G~~~~~ 197 (366)
T cd03822 147 RALLLRA---------------------YPEKIAVIPHGVPDPPAEPP-----ES--LKA-LGGLDGRPVLLTFGLLRPY 197 (366)
T ss_pred HHHHhhc---------------------CCCcEEEeCCCCcCcccCCc-----hh--hHh-hcCCCCCeEEEEEeeccCC
Confidence 5554310 02366778999997765421 11 111 1122567899999999999
Q ss_pred cCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCccc-EEEEcCCCCHHHHH
Q 002955 348 KGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQP-VVLIDTPLQFYERI 426 (863)
Q Consensus 348 KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~p-v~~~~~~v~~~el~ 426 (863)
||+..+++|++.+.+++|+++ |+.+|... +.......+..+++.+. +..+ |.++.+.++.+++.
T Consensus 198 K~~~~ll~a~~~~~~~~~~~~----l~i~G~~~----~~~~~~~~~~~~~i~~~-------~~~~~v~~~~~~~~~~~~~ 262 (366)
T cd03822 198 KGLELLLEALPLLVAKHPDVR----LLVAGETH----PDLERYRGEAYALAERL-------GLADRVIFINRYLPDEELP 262 (366)
T ss_pred CCHHHHHHHHHHHHhhCCCeE----EEEeccCc----cchhhhhhhhHhHHHhc-------CCCCcEEEecCcCCHHHHH
Confidence 999999999999998888766 88887422 11111111111122222 2222 44444559999999
Q ss_pred HHHHhccceeeccccc--CCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC---CCceEeCCCCHH
Q 002955 427 AYYVIAECCLVTAVRD--GMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL---SGAIRVNPWNID 501 (863)
Q Consensus 427 aly~~ADv~vvtS~~E--GmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l---~~al~VnP~d~~ 501 (863)
.+|+.||++++||..| |++++++|||+| +.|+|+|..+| .+.+ ..|++++|.|++
T Consensus 263 ~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~-------------------G~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~ 322 (366)
T cd03822 263 ELFSAADVVVLPYRSADQTQSGVLAYAIGF-------------------GKPVISTPVGH-AEEVLDGGTGLLVPPGDPA 322 (366)
T ss_pred HHHhhcCEEEecccccccccchHHHHHHHc-------------------CCCEEecCCCC-hheeeeCCCcEEEcCCCHH
Confidence 9999999999999999 999999999999 56789999888 6666 348999999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHH
Q 002955 502 AVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDL 545 (863)
Q Consensus 502 ~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 545 (863)
++|++|.++++.+ +.+....++.++++.++++..+++++.+.+
T Consensus 323 ~~~~~l~~l~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 365 (366)
T cd03822 323 ALAEAIRRLLADP-ELAQALRARAREYARAMSWERVAERYLRLL 365 (366)
T ss_pred HHHHHHHHHHcCh-HHHHHHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence 9999999999865 344555667788888899999999887644
No 80
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=99.79 E-value=1.8e-17 Score=189.68 Aligned_cols=272 Identities=13% Similarity=0.097 Sum_probs=187.3
Q ss_pred CCCCCEEEEeCcccch-HHHHHHhhCCCCeEEEEEeCC--CCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHHHHHH
Q 002955 197 SPDDDFVWVHDYHLMV-LPTFLRKRFNRVKLGFFLHSP--FPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSC 273 (863)
Q Consensus 197 ~p~~D~VwvhDyhl~l-lp~~lr~~~~~~~i~~flH~P--fP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~Fl~~ 273 (863)
+++.|+++.|-+|... .-.+++++....++....|-. ++.....+.++.++.+ +-.+|.|.+.+....+.+...
T Consensus 125 ~~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~~~~~~~~~~~~~~~---~~~~d~ii~~S~~~~~~l~~~ 201 (407)
T cd04946 125 DGQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYEDRYPSGYIPLRRYL---LSSLDAVFPCSEQGRNYLQKR 201 (407)
T ss_pred ccCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhhhhccccchHHHHHH---HhcCCEEEECCHHHHHHHHHH
Confidence 3445777777655433 334567776666789999942 1111111111222222 346899988887666544321
Q ss_pred HHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCHHHH
Q 002955 274 CSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLK 353 (863)
Q Consensus 274 ~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~ 353 (863)
.+ ....++.++|+|++...+... ....++..|+++||+.+.||+..+
T Consensus 202 ----~~---------------~~~~ki~vi~~gv~~~~~~~~--------------~~~~~~~~il~~Grl~~~Kg~~~l 248 (407)
T cd04946 202 ----YP---------------AYKEKIKVSYLGVSDPGIISK--------------PSKDDTLRIVSCSYLVPVKRVDLI 248 (407)
T ss_pred ----CC---------------CccccEEEEECCcccccccCC--------------CCCCCCEEEEEeeccccccCHHHH
Confidence 11 122356788999998765321 011456789999999999999999
Q ss_pred HHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHh--
Q 002955 354 LLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVI-- 431 (863)
Q Consensus 354 l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~-- 431 (863)
++|+.++.+++|+.. +.++.+|. |+..++++ +++++. +..+.+.+.|.++.+|+.++|+.
T Consensus 249 i~a~~~l~~~~p~~~--l~~~iiG~-----g~~~~~l~----~~~~~~-------~~~~~V~f~G~v~~~e~~~~~~~~~ 310 (407)
T cd04946 249 IKALAALAKARPSIK--IKWTHIGG-----GPLEDTLK----ELAESK-------PENISVNFTGELSNSEVYKLYKENP 310 (407)
T ss_pred HHHHHHHHHhCCCce--EEEEEEeC-----chHHHHHH----HHHHhc-------CCCceEEEecCCChHHHHHHHhhcC
Confidence 999999999988764 66777763 34333333 333321 11234567889999999999986
Q ss_pred ccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCCC---ceEeCC-CCHHHHHHHH
Q 002955 432 AECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSG---AIRVNP-WNIDAVAEAM 507 (863)
Q Consensus 432 ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~~---al~VnP-~d~~~~A~ai 507 (863)
||+++.||..|||+++++|||+| |.|+|+|..+|..+.+.+ |++++| .|++++|++|
T Consensus 311 ~~v~v~~S~~Eg~p~~llEAma~-------------------G~PVIas~vgg~~e~i~~~~~G~l~~~~~~~~~la~~I 371 (407)
T cd04946 311 VDVFVNLSESEGLPVSIMEAMSF-------------------GIPVIATNVGGTPEIVDNGGNGLLLSKDPTPNELVSSL 371 (407)
T ss_pred CCEEEeCCccccccHHHHHHHHc-------------------CCCEEeCCCCCcHHHhcCCCcEEEeCCCCCHHHHHHHH
Confidence 68899999999999999999999 567999999998888843 688876 4899999999
Q ss_pred HHHhCCCHHHHHHHHHHHhhhh-ccCCHHHHHHHHH
Q 002955 508 DSALGVSDAEKQMRHEKHYRYV-STHDVAYWARSFL 542 (863)
Q Consensus 508 ~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l 542 (863)
.++++. ++++....++.++++ ..+++..+.++|+
T Consensus 372 ~~ll~~-~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 372 SKFIDN-EEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHhC-HHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 999984 455555566667666 4588888877765
No 81
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=99.79 E-value=3.6e-18 Score=179.03 Aligned_cols=190 Identities=18% Similarity=0.140 Sum_probs=118.3
Q ss_pred eeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC-CceEEccCcEEEEeCCc----
Q 002955 594 AILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPNYG---- 668 (863)
Q Consensus 594 lI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~-~l~liaenGa~I~~~~~---- 668 (863)
+|++|+||||++ .+. ++++++++|++| ++.|+.|+++|||+...+..++..+. ..++|++||+.|..+..
T Consensus 1 li~~DlDGTLl~---~~~-~~~~~~~ai~~l-~~~G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa~I~~~~~~~~~ 75 (225)
T TIGR02461 1 VIFTDLDGTLLP---PGY-EPGPAREALEEL-KDLGFPIVFVSSKTRAEQEYYREELGVEPPFIVENGGAIFIPRGYFPF 75 (225)
T ss_pred CEEEeCCCCCcC---CCC-CchHHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCcEEEecCccccc
Confidence 689999999998 333 556799999998 78899999999999999999887763 34799999999988542
Q ss_pred ----------e-eEEeecCCCCccHHHHHHHHHHHHhhcCCCceeee---c----cceeEeec------ccCCCCcchhh
Q 002955 669 ----------V-DWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIET---K----ESALVWNF------QYADPDFGSCQ 724 (863)
Q Consensus 669 ----------~-~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~---k----~~~l~~~y------~~~d~~~~~~~ 724 (863)
. .+...++ .+.++++++...+..+-.++.. . ...+.... +.....+-..
T Consensus 76 ~~~~~~~~~~~~i~~~~l~------~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~- 148 (225)
T TIGR02461 76 PVGAGREVGNYEVIELGKP------VAKIRAALKEAENEYGLKYYGNSTAEEVEKLTGLPRELAPLAKRREYSETIFLW- 148 (225)
T ss_pred cccccccCCCeEEEEcCCC------HHHHHHHHHHHHHhcCccchhcCCHHHHHHHHCcCHHHHHHHHhhhcCCcccCC-
Confidence 1 2222221 1223333332222111010000 0 00000000 0000000000
Q ss_pred HHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCC--CcceEEEEeCCcchHHHHHHhhhh
Q 002955 725 AKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGM--LPDFVLCIGDDRSDEDMFEVIKSA 799 (863)
Q Consensus 725 a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi--~~d~vlaiGD~~ND~~Mf~~ag~~ 799 (863)
.++.+..+.+.+....+.+..+..++++. +++|||.|++++++.+ ++ +..++++|||+.||++||+.+|.+
T Consensus 149 ~~e~~~~~~~~~~~~~~~~~~s~~~~~i~-~~~sK~~al~~l~~~~---~~~~~~~~~i~~GD~~nD~~ml~~ag~~ 221 (225)
T TIGR02461 149 SREGWEAILVTARARGLKYTHGGRFYTVH-GGSDKGKAIKRLLDLY---KLRPGAIESVGLGDSENDFPMFEVVDLA 221 (225)
T ss_pred CHHHHHHHHHHHHHcCCcEEECCEEEEEC-CCCCHHHHHHHHHHHh---ccccCcccEEEEcCCHHHHHHHHhCCCc
Confidence 11112223333333456666677778865 5999999999999988 65 666899999999999999999973
No 82
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=99.78 E-value=1.8e-17 Score=193.16 Aligned_cols=271 Identities=14% Similarity=0.100 Sum_probs=178.0
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChh-Hhhc---C-CChHHHHHHHHhCCEecccCHHHHHHHHHH
Q 002955 199 DDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE-IYRT---L-PIRDELLRALLNADLIGFHTFDYARHFLSC 273 (863)
Q Consensus 199 ~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e-~~r~---l-p~r~eil~~ll~~dligF~t~~~~~~Fl~~ 273 (863)
+.|+|.++--+.. .+..+ +..+.+++..++|.-.=+.. .-.. + +.-+..++.+-.+|.|-..|..-.+.....
T Consensus 211 ~~di~i~dr~~~~-~~~~~-~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~~~y~~~~~~~~~~D~iI~~S~~~~~~l~~~ 288 (500)
T TIGR02918 211 KKDIIILDRSTGI-GQAVL-ENKGPAKLGVVVHAEHFSESATNETYILWNNYYEYQFSNADYIDFFITATDIQNQILKNQ 288 (500)
T ss_pred CCCEEEEcCCccc-chHHH-hcCCCceEEEEEChhhhcCccCcchhHHHHHHHHHHHhchhhCCEEEECCHHHHHHHHHH
Confidence 3588888754543 34444 55668999999995431000 0000 0 111222333444677766665443333221
Q ss_pred HHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCHHHH
Q 002955 274 CSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLK 353 (863)
Q Consensus 274 ~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~ 353 (863)
.. .+.+...+|.++|+|++...+. +. ....+..|++|||+.+.||+..+
T Consensus 289 ~~----------------~~~~~~~ki~viP~g~~~~~~~-----~~----------~~r~~~~il~vGrl~~~Kg~~~l 337 (500)
T TIGR02918 289 FK----------------KYYNIEPRIYTIPVGSLDELQY-----PE----------QERKPFSIITASRLAKEKHIDWL 337 (500)
T ss_pred hh----------------hhcCCCCcEEEEcCCCcccccC-----cc----------cccCCeEEEEEeccccccCHHHH
Confidence 11 1122234567889998754321 10 01234689999999999999999
Q ss_pred HHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcc
Q 002955 354 LLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAE 433 (863)
Q Consensus 354 l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~AD 433 (863)
++|+.++.+++|+++ |+++|. |++. +++++++++.+ ....+.+.|+. ++..+|+.||
T Consensus 338 i~A~~~l~~~~p~~~----l~i~G~-----G~~~----~~l~~~i~~~~-------l~~~V~f~G~~---~~~~~~~~ad 394 (500)
T TIGR02918 338 VKAVVKAKKSVPELT----FDIYGE-----GGEK----QKLQKIINENQ-------AQDYIHLKGHR---NLSEVYKDYE 394 (500)
T ss_pred HHHHHHHHhhCCCeE----EEEEEC-----chhH----HHHHHHHHHcC-------CCCeEEEcCCC---CHHHHHHhCC
Confidence 999999999999876 888873 3332 34444444432 12234566654 5778999999
Q ss_pred ceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccc-cCcccC-C--CceEeCC----CC----HH
Q 002955 434 CCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFV-GCSPSL-S--GAIRVNP----WN----ID 501 (863)
Q Consensus 434 v~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~-G~~~~l-~--~al~VnP----~d----~~ 501 (863)
++|+||.+||||++++||||| |.|+|+|... |..+.+ + +|++|+| .| ++
T Consensus 395 v~v~pS~~Egfgl~~lEAma~-------------------G~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d~~~~~~ 455 (500)
T TIGR02918 395 LYLSASTSEGFGLTLMEAVGS-------------------GLGMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDDEDQIIT 455 (500)
T ss_pred EEEEcCccccccHHHHHHHHh-------------------CCCEEEecCCCCCHHHccCCCCEEEEeCCccccchhHHHH
Confidence 999999999999999999999 5679999986 666666 2 4899973 34 89
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHH
Q 002955 502 AVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLE 546 (863)
Q Consensus 502 ~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 546 (863)
++|++|.++|+ +.+++...+..++....+++..-++++.+-++
T Consensus 456 ~la~~I~~ll~--~~~~~~~~~~a~~~a~~fs~~~v~~~w~~ll~ 498 (500)
T TIGR02918 456 ALAEKIVEYFN--SNDIDAFHEYSYQIAEGFLTANIIEKWKKLVR 498 (500)
T ss_pred HHHHHHHHHhC--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 99999999994 34556666677777888888888877776554
No 83
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=99.78 E-value=1.6e-17 Score=183.26 Aligned_cols=282 Identities=21% Similarity=0.227 Sum_probs=195.7
Q ss_pred hcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHHHHHHH
Q 002955 195 VISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCC 274 (863)
Q Consensus 195 ~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~Fl~~~ 274 (863)
..++ |+|++|......+...+..+..++++.+..|.+++....... ..+......+-.+|.+-+.+......|.+..
T Consensus 91 ~~~~--dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~-~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~ 167 (377)
T cd03798 91 RFRP--DLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR-LLRALLRRALRRADAVIAVSEALADELKALG 167 (377)
T ss_pred cCCC--CEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh-hHHHHHHHHHhcCCeEEeCCHHHHHHHHHhc
Confidence 4455 899999655444444444444458899999987764332211 1233334456678999988877766665410
Q ss_pred HhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCHHHHH
Q 002955 275 SRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKL 354 (863)
Q Consensus 275 ~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l 354 (863)
.....+.++|+|+|...+.... ......+ ....++..++++||+++.||+..++
T Consensus 168 --------------------~~~~~~~~i~~~~~~~~~~~~~-----~~~~~~~-~~~~~~~~i~~~g~~~~~k~~~~li 221 (377)
T cd03798 168 --------------------IDPEKVTVIPNGVDTERFSPAD-----RAEARKL-GLPEDKKVILFVGRLVPRKGIDYLI 221 (377)
T ss_pred --------------------CCCCceEEcCCCcCcccCCCcc-----hHHHHhc-cCCCCceEEEEeccCccccCHHHHH
Confidence 1123567889999988775321 1111111 1124678999999999999999999
Q ss_pred HHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccc
Q 002955 355 LAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAEC 434 (863)
Q Consensus 355 ~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv 434 (863)
+|++.+.+++|+++ |+.+|. ++....+++. ++.. +..+.+.+.+.++.+++..+|+.||+
T Consensus 222 ~~~~~~~~~~~~~~----l~i~g~-----~~~~~~~~~~----~~~~-------~~~~~v~~~g~~~~~~~~~~~~~ad~ 281 (377)
T cd03798 222 EALARLLKKRPDVH----LVIVGD-----GPLREALEAL----AAEL-------GLEDRVTFLGAVPHEEVPAYYAAADV 281 (377)
T ss_pred HHHHHHHhcCCCeE----EEEEcC-----CcchHHHHHH----HHhc-------CCcceEEEeCCCCHHHHHHHHHhcCe
Confidence 99999988877655 777763 2232233322 2222 33445667889999999999999999
Q ss_pred eeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC---CceEeCCCCHHHHHHHHHHHh
Q 002955 435 CLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAMDSAL 511 (863)
Q Consensus 435 ~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL 511 (863)
++.||..||+|++++|||+| +.|+|+|+.+|..+.+. .|++++|.|+++++++|.+++
T Consensus 282 ~i~~~~~~~~~~~~~Ea~~~-------------------G~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~ 342 (377)
T cd03798 282 FVLPSLREGFGLVLLEAMAC-------------------GLPVVATDVGGIPEIITDGENGLLVPPGDPEALAEAILRLL 342 (377)
T ss_pred eecchhhccCChHHHHHHhc-------------------CCCEEEecCCChHHHhcCCcceeEECCCCHHHHHHHHHHHh
Confidence 99999999999999999999 56799999888877773 358999999999999999999
Q ss_pred CCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHH
Q 002955 512 GVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLE 546 (863)
Q Consensus 512 ~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 546 (863)
+++.. +...+........+++..+++.+.+.++
T Consensus 343 ~~~~~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 375 (377)
T cd03798 343 ADPWL--RLGRAARRRVAERFSWENVAERLLELYR 375 (377)
T ss_pred cCcHH--HHhHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 88754 2222333344455788888887776654
No 84
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=99.78 E-value=1.6e-17 Score=183.24 Aligned_cols=281 Identities=16% Similarity=0.172 Sum_probs=189.5
Q ss_pred hhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHH-HhCCEecccCHHHHHHHHH
Q 002955 194 EVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRAL-LNADLIGFHTFDYARHFLS 272 (863)
Q Consensus 194 ~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~l-l~~dligF~t~~~~~~Fl~ 272 (863)
+..+| |+|.+|+++.......+.......++.+..|..++...-. .......+.+-+ -.+|.+-..+......+..
T Consensus 77 ~~~~~--div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~ 153 (365)
T cd03807 77 RRLRP--DVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLDLGKK-STRLVARLRRLLSSFIPLIVANSAAAAEYHQA 153 (365)
T ss_pred HhhCC--CEEEeccccccHHHHHHHHhcCCCcEEEEecCCcccccch-hHhHHHHHHHHhccccCeEEeccHHHHHHHHH
Confidence 44466 9999999998777777666546789999999776543200 001111111111 2356654444433333322
Q ss_pred HHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh---CCCeEEEeecCcccccC
Q 002955 273 CCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMDIFKG 349 (863)
Q Consensus 273 ~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~~KG 349 (863)
. +. ...++.++|+|+|...+..... ....+++++ .++.+++++||+++.||
T Consensus 154 ~-----~~---------------~~~~~~vi~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~i~~~G~~~~~K~ 207 (365)
T cd03807 154 I-----GY---------------PPKKIVVIPNGVDTERFSPDLD------ARARLREELGLPEDTFLIGIVARLHPQKD 207 (365)
T ss_pred c-----CC---------------ChhheeEeCCCcCHHhcCCccc------chHHHHHhcCCCCCCeEEEEecccchhcC
Confidence 0 11 1235667899999887753211 112233344 45788999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHH
Q 002955 350 ISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYY 429 (863)
Q Consensus 350 i~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly 429 (863)
+..+++|+.++.+++|+++ |+.+|... .....+.. .. ... +..+.+.+.+. .+++..+|
T Consensus 208 ~~~li~a~~~l~~~~~~~~----l~i~G~~~-----~~~~~~~~----~~---~~~---~~~~~v~~~g~--~~~~~~~~ 266 (365)
T cd03807 208 HATLLRAAALLLKKFPNAR----LLLVGDGP-----DRANLELL----AL---KEL---GLEDKVILLGE--RSDVPALL 266 (365)
T ss_pred HHHHHHHHHHHHHhCCCeE----EEEecCCc-----chhHHHHH----HH---Hhc---CCCceEEEccc--cccHHHHH
Confidence 9999999999998888765 88777432 21222221 11 111 12233444453 46899999
Q ss_pred HhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC-CceEeCCCCHHHHHHHHH
Q 002955 430 VIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS-GAIRVNPWNIDAVAEAMD 508 (863)
Q Consensus 430 ~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~-~al~VnP~d~~~~A~ai~ 508 (863)
+.||++++||..||+|++++|||+| +.|+|+|..+|..+.+. .|+++++.|+++++++|.
T Consensus 267 ~~adi~v~ps~~e~~~~~~~Ea~a~-------------------g~PvI~~~~~~~~e~~~~~g~~~~~~~~~~l~~~i~ 327 (365)
T cd03807 267 NALDVFVLSSLSEGFPNVLLEAMAC-------------------GLPVVATDVGDNAELVGDTGFLVPPGDPEALAEAIE 327 (365)
T ss_pred HhCCEEEeCCccccCCcHHHHHHhc-------------------CCCEEEcCCCChHHHhhcCCEEeCCCCHHHHHHHHH
Confidence 9999999999999999999999999 56799999999888775 589999999999999999
Q ss_pred HHhCCCHHHHHHHHHHHhhhhc-cCCHHHHHHHHHHH
Q 002955 509 SALGVSDAEKQMRHEKHYRYVS-THDVAYWARSFLQD 544 (863)
Q Consensus 509 ~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~l~~ 544 (863)
++++++ +++....++.++++. .+++...++.+.+-
T Consensus 328 ~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 363 (365)
T cd03807 328 ALLADP-ALRQALGEAARERIEENFSIEAMVEAYEEL 363 (365)
T ss_pred HHHhCh-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 999876 445555566666664 47888888877653
No 85
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=99.78 E-value=1.2e-17 Score=185.24 Aligned_cols=270 Identities=19% Similarity=0.240 Sum_probs=183.8
Q ss_pred HHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCC---ChH----HH-HHHHHhCCEecccC
Q 002955 192 VMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLP---IRD----EL-LRALLNADLIGFHT 263 (863)
Q Consensus 192 i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp---~r~----ei-l~~ll~~dligF~t 263 (863)
+.+..+| |+|++|+...+........+..++++.+.+|.+|+....+...+ ... .+ ...+-.+|.+-+.+
T Consensus 79 ~~~~~~~--Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s 156 (374)
T cd03817 79 ILKELGP--DIVHTHTPFSLGLLGLRVARKLGIPVVATYHTMYEDYTHYVPLGRLLARAVVRRKLSRRFYNRCDAVIAPS 156 (374)
T ss_pred HHhhcCC--CEEEECCchhhhhHHHHHHHHcCCCEEEEecCCHHHHHHHHhcccchhHHHHHHHHHHHHhhhCCEEEecc
Confidence 3445566 89999987554444444334457899999998876332111111 000 11 12234578887777
Q ss_pred HHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh---CCCeEEEe
Q 002955 264 FDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLG 340 (863)
Q Consensus 264 ~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~ 340 (863)
......+.. .+....+.++|+|+|...+.... ... .++.+ .+++.|++
T Consensus 157 ~~~~~~~~~---------------------~~~~~~~~vi~~~~~~~~~~~~~----~~~----~~~~~~~~~~~~~i~~ 207 (374)
T cd03817 157 EKIADLLRE---------------------YGVKRPIEVIPTGIDLDRFEPVD----GDD----ERRKLGIPEDEPVLLY 207 (374)
T ss_pred HHHHHHHHh---------------------cCCCCceEEcCCccchhccCccc----hhH----HHHhcCCCCCCeEEEE
Confidence 654443322 01122377899999988765321 111 12222 45788999
Q ss_pred ecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCC
Q 002955 341 VDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPL 420 (863)
Q Consensus 341 Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v 420 (863)
+||+.+.||+..+++|+..+.++.|+++ |+.+|. ++.. .++.+++++. +..+.+.+.+.+
T Consensus 208 ~G~~~~~k~~~~l~~~~~~~~~~~~~~~----l~i~G~-----~~~~----~~~~~~~~~~-------~~~~~v~~~g~~ 267 (374)
T cd03817 208 VGRLAKEKNIDFLIRAFARLLKEEPDVK----LVIVGD-----GPER----EELEELAREL-------GLADRVIFTGFV 267 (374)
T ss_pred EeeeecccCHHHHHHHHHHHHHhCCCeE----EEEEeC-----CchH----HHHHHHHHHc-------CCCCcEEEeccC
Confidence 9999999999999999999988877655 887773 2222 2333333332 122345667899
Q ss_pred CHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC---CceEeCC
Q 002955 421 QFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNP 497 (863)
Q Consensus 421 ~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al~VnP 497 (863)
+.+++..+|+.||+++.||..||+|++.+|||+| +.|+|+|...|..+.+. +|+++++
T Consensus 268 ~~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~-------------------g~PvI~~~~~~~~~~i~~~~~g~~~~~ 328 (374)
T cd03817 268 PREELPDYYKAADLFVFASTTETQGLVLLEAMAA-------------------GLPVVAVDAPGLPDLVADGENGFLFPP 328 (374)
T ss_pred ChHHHHHHHHHcCEEEecccccCcChHHHHHHHc-------------------CCcEEEeCCCChhhheecCceeEEeCC
Confidence 9999999999999999999999999999999999 56789999888887773 4899999
Q ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCC
Q 002955 498 WNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHD 533 (863)
Q Consensus 498 ~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~ 533 (863)
.|. +++++|.++++++... +...++.++++..++
T Consensus 329 ~~~-~~~~~i~~l~~~~~~~-~~~~~~~~~~~~~~~ 362 (374)
T cd03817 329 GDE-ALAEALLRLLQDPELR-RRLSKNAEESAEKFS 362 (374)
T ss_pred CCH-HHHHHHHHHHhChHHH-HHHHHHHHHHHHHHH
Confidence 888 9999999999877543 445555666666554
No 86
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.78 E-value=1.3e-17 Score=184.88 Aligned_cols=274 Identities=18% Similarity=0.160 Sum_probs=188.9
Q ss_pred hhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCCh----HHHHH-HHHhCCEecccCHHHHH
Q 002955 194 EVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIR----DELLR-ALLNADLIGFHTFDYAR 268 (863)
Q Consensus 194 ~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r----~eil~-~ll~~dligF~t~~~~~ 268 (863)
+..+| |+|++|..-...+...+-.+..++++.+++|..||..-........ ..+.+ -.-.+|.+-+.+.....
T Consensus 80 ~~~~p--dii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~ 157 (364)
T cd03814 80 DAFAP--DVVHIATPGPLGLAALRAARRLGIPVVTSYHTDFPEYLRYYGLGPLSWLAWAYLRWFHNRADRVLVPSPSLAD 157 (364)
T ss_pred HhcCC--CEEEEeccchhhHHHHHHHHHcCCCEEEEEecChHHHhhhcccchHhHhhHHHHHHHHHhCCEEEeCCHHHHH
Confidence 55566 8999996544322223322334688999999888733221111111 11222 23357888777776554
Q ss_pred HHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh--CCCeEEEeecCccc
Q 002955 269 HFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF--KGQIVMLGVDDMDI 346 (863)
Q Consensus 269 ~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~~~vil~Vdrld~ 346 (863)
.+.. .+ ...+.++|+|+|...|...... . ..++++ .++++++++||+.+
T Consensus 158 ~~~~--------------------~~--~~~~~~~~~g~~~~~~~~~~~~---~----~~~~~~~~~~~~~i~~~G~~~~ 208 (364)
T cd03814 158 ELRA--------------------RG--FRRVRLWPRGVDTELFHPRRRD---E----ALRARLGPPDRPVLLYVGRLAP 208 (364)
T ss_pred HHhc--------------------cC--CCceeecCCCccccccCccccc---H----HHHHHhCCCCCeEEEEEecccc
Confidence 2221 00 1245678999998877532111 1 112222 45788999999999
Q ss_pred ccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHH
Q 002955 347 FKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERI 426 (863)
Q Consensus 347 ~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~ 426 (863)
.||+...++|+.++.++ |+++ |+.+|. +++...++ . . .+-+.+.+.++.+++.
T Consensus 209 ~k~~~~~i~~~~~l~~~-~~~~----l~i~G~-----~~~~~~~~--------~--------~-~~~v~~~g~~~~~~~~ 261 (364)
T cd03814 209 EKNLEALLDADLPLRRR-PPVR----LVIVGD-----GPARARLE--------A--------R-YPNVHFLGFLDGEELA 261 (364)
T ss_pred ccCHHHHHHHHHHhhhc-CCce----EEEEeC-----CchHHHHh--------c--------c-CCcEEEEeccCHHHHH
Confidence 99999999999999877 7665 887773 22222222 0 0 1123456679999999
Q ss_pred HHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC---CceEeCCCCHHHH
Q 002955 427 AYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAV 503 (863)
Q Consensus 427 aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al~VnP~d~~~~ 503 (863)
.+|+.||+++.||..||||++++|||+| +.|+|+|...|..+.+. .|++++|.|.+++
T Consensus 262 ~~~~~~d~~l~~s~~e~~~~~~lEa~a~-------------------g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l 322 (364)
T cd03814 262 AAYASADVFVFPSRTETFGLVVLEAMAS-------------------GLPVVAPDAGGPADIVTDGENGLLVEPGDAEAF 322 (364)
T ss_pred HHHHhCCEEEECcccccCCcHHHHHHHc-------------------CCCEEEcCCCCchhhhcCCcceEEcCCCCHHHH
Confidence 9999999999999999999999999999 56799999999888774 4899999999999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHH
Q 002955 504 AEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDL 545 (863)
Q Consensus 504 A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 545 (863)
+++|.++++.+ +++....+..++.+..+++..+++++++.+
T Consensus 323 ~~~i~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (364)
T cd03814 323 AAALAALLADP-ELRRRMAARARAEAERRSWEAFLDNLLEAY 363 (364)
T ss_pred HHHHHHHHcCH-HHHHHHHHHHHHHHhhcCHHHHHHHHHHhh
Confidence 99999999765 444555566677777889999888887643
No 87
>PRK10125 putative glycosyl transferase; Provisional
Probab=99.78 E-value=5.4e-18 Score=193.32 Aligned_cols=186 Identities=11% Similarity=0.031 Sum_probs=125.7
Q ss_pred EEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecC-c-ccccCHHHHHHHHHHHHHhCCCCCCceEEEE
Q 002955 298 VSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDD-M-DIFKGISLKLLAMEQLLSQNPSKRGKIVLVQ 375 (863)
Q Consensus 298 ~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdr-l-d~~KGi~~~l~A~~~ll~~~p~~~~~vvLvq 375 (863)
.++.++|+|||++.+... ++. ...+ ...++++|++|+| + ++.||+..+++|+.++ .++ +.|++
T Consensus 212 ~~i~vI~NGid~~~~~~~---~~~----~~~~-~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l---~~~----~~L~i 276 (405)
T PRK10125 212 GRCRIINNGIDMATEAIL---AEL----PPVR-ETQGKPKIAVVAHDLRYDGKTDQQLVREMMAL---GDK----IELHT 276 (405)
T ss_pred CCEEEeCCCcCccccccc---ccc----cccc-cCCCCCEEEEEEeccccCCccHHHHHHHHHhC---CCC----eEEEE
Confidence 367889999997543211 000 0001 1246778999999 4 4789999999999875 233 55888
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeee
Q 002955 376 IANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICR 455 (863)
Q Consensus 376 i~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~ 455 (863)
+|... ... . ..|.++....+..++..+|+.||+||+||..|||++|++|||||
T Consensus 277 vG~g~-----~~~--~-------------------~~v~~~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~- 329 (405)
T PRK10125 277 FGKFS-----PFT--A-------------------GNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSI- 329 (405)
T ss_pred EcCCC-----ccc--c-------------------cceEEecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHc-
Confidence 88421 100 0 01333332336789999999999999999999999999999999
Q ss_pred cCCcccccccCCCCCCCCCccEEecccccCcccCC--CceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhh-hccC
Q 002955 456 QGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS--GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRY-VSTH 532 (863)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~--~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~-v~~~ 532 (863)
+.|+|+|+.+|+.+.+. +|++|+|.|++++|+++...+... +......+.++. ...+
T Consensus 330 ------------------G~PVVat~~gG~~Eiv~~~~G~lv~~~d~~~La~~~~~~~~~~--~~~~~~~~~r~~~~~~f 389 (405)
T PRK10125 330 ------------------GVPVIATHSDAAREVLQKSGGKTVSEEEVLQLAQLSKPEIAQA--VFGTTLAEFSQRSRAAY 389 (405)
T ss_pred ------------------CCCEEEeCCCChHHhEeCCcEEEECCCCHHHHHhccCHHHHHH--hhhhHHHHHHHHHHHhC
Confidence 67899999999887773 599999999999998654322110 000011223333 4558
Q ss_pred CHHHHHHHHHHHH
Q 002955 533 DVAYWARSFLQDL 545 (863)
Q Consensus 533 ~~~~W~~~~l~~l 545 (863)
+....++++++-.
T Consensus 390 s~~~~~~~y~~lY 402 (405)
T PRK10125 390 SGQQMLEEYVNFY 402 (405)
T ss_pred CHHHHHHHHHHHH
Confidence 8888888877644
No 88
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=99.78 E-value=2.9e-17 Score=182.78 Aligned_cols=274 Identities=17% Similarity=0.198 Sum_probs=192.0
Q ss_pred CEEEEeC-cccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcC-CC-------hHHH-HHHHHhCCEecccCHHHHHHH
Q 002955 201 DFVWVHD-YHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTL-PI-------RDEL-LRALLNADLIGFHTFDYARHF 270 (863)
Q Consensus 201 D~VwvhD-yhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~l-p~-------r~ei-l~~ll~~dligF~t~~~~~~F 270 (863)
|+|++|. ..+..++....++..+.++.+.+|..||........ .. ...+ ...+..+|.+-+.+...++.|
T Consensus 101 D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~~~~~~~ 180 (394)
T cd03794 101 DVIIATSPPLLIALAALLLARLKGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLERLIYRRADAIVVISPGMREYL 180 (394)
T ss_pred CEEEEcCChHHHHHHHHHHHHhcCCCEEEEehhhcchhHHHccCccccchHHHHHHHHHHHHHhcCCEEEEECHHHHHHH
Confidence 9999998 445556666655556899999999988754332111 11 1111 123456899988888777766
Q ss_pred HHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCH
Q 002955 271 LSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGI 350 (863)
Q Consensus 271 l~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi 350 (863)
.. .+ ....++.++|+|++...+...... ..... .....++.+++++||+.+.||+
T Consensus 181 ~~-----~~---------------~~~~~~~~i~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~i~~~G~~~~~k~~ 235 (394)
T cd03794 181 VR-----RG---------------VPPEKISVIPNGVDLELFKPPPAD----ESLRK-ELGLDDKFVVLYAGNIGRAQGL 235 (394)
T ss_pred Hh-----cC---------------CCcCceEEcCCCCCHHHcCCccch----hhhhh-ccCCCCcEEEEEecCcccccCH
Confidence 52 01 122356789999998877532111 11111 1122567899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHH
Q 002955 351 SLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYV 430 (863)
Q Consensus 351 ~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~ 430 (863)
..+++|+.++.+. |+++ |+.+|. ++....+++.+. .- +...|.++ +.++.+++.++|+
T Consensus 236 ~~l~~~~~~l~~~-~~~~----l~i~G~-----~~~~~~~~~~~~----~~-------~~~~v~~~-g~~~~~~~~~~~~ 293 (394)
T cd03794 236 DTLLEAAALLKDR-PDIR----FLIVGD-----GPEKEELKELAK----AL-------GLDNVTFL-GRVPKEELPELLA 293 (394)
T ss_pred HHHHHHHHHHhhc-CCeE----EEEeCC-----cccHHHHHHHHH----Hc-------CCCcEEEe-CCCChHHHHHHHH
Confidence 9999999999776 6655 877773 333333333211 11 22335444 5899999999999
Q ss_pred hccceeecccccCC-----CccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC---CceEeCCCCHHH
Q 002955 431 IAECCLVTAVRDGM-----NLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDA 502 (863)
Q Consensus 431 ~ADv~vvtS~~EGm-----nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al~VnP~d~~~ 502 (863)
.||++++||..|++ +++.+|||+| |.|+|+|..+|..+.+. .|+++++.|+++
T Consensus 294 ~~di~i~~~~~~~~~~~~~p~~~~Ea~~~-------------------G~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~ 354 (394)
T cd03794 294 AADVGLVPLKPGPAFEGVSPSKLFEYMAA-------------------GKPVLASVDGESAELVEEAGAGLVVPPGDPEA 354 (394)
T ss_pred hhCeeEEeccCcccccccCchHHHHHHHC-------------------CCcEEEecCCCchhhhccCCcceEeCCCCHHH
Confidence 99999999999876 5557999999 56799999999888883 489999999999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHhhhhc-cCCHHHHHHHH
Q 002955 503 VAEAMDSALGVSDAEKQMRHEKHYRYVS-THDVAYWARSF 541 (863)
Q Consensus 503 ~A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~ 541 (863)
++++|.++++.+ +++....++.++++. .+++..+++++
T Consensus 355 l~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~ 393 (394)
T cd03794 355 LAAAILELLDDP-EERAEMGENGRRYVEEKFSREKLAERL 393 (394)
T ss_pred HHHHHHHHHhCh-HHHHHHHHHHHHHHHHhhcHHHHHHhc
Confidence 999999999644 555555666677776 68888888765
No 89
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.77 E-value=1.5e-17 Score=187.43 Aligned_cols=280 Identities=16% Similarity=0.103 Sum_probs=185.7
Q ss_pred HHHHHHHHHHHHHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCC---ChhHhhcC-CChHHHHHHHHhC
Q 002955 181 YVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFP---SSEIYRTL-PIRDELLRALLNA 256 (863)
Q Consensus 181 Y~~vN~~fa~~i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP---~~e~~r~l-p~r~eil~~ll~~ 256 (863)
..+.-+.|-+++.. .. ..|+|.+|-.+.... .+.......+...++|...- .......+ ...+.++..+-.+
T Consensus 83 ~~~l~~~~l~~l~~-~~-~~diii~~~~~~~~~--~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (372)
T cd04949 83 EEELFAFFLDELNK-DT-KPDVFILDRPTLDGQ--ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLINNFYEYVFENLDKV 158 (372)
T ss_pred HHHHHHHHHHHHhc-CC-CCCEEEECCccccch--hHHhccCCceEEEEEChHHhCCcccccccccchhhHHHHhChhhC
Confidence 33444445555443 22 349999987776655 23333345667788885421 11110001 1123455556678
Q ss_pred CEecccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCe
Q 002955 257 DLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQI 336 (863)
Q Consensus 257 dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 336 (863)
|.|.+.|..-.+.+.... + ....+.++|+|++...+.... .....+.
T Consensus 159 d~ii~~s~~~~~~l~~~~----~----------------~~~~v~~ip~g~~~~~~~~~~-------------~~~~~~~ 205 (372)
T cd04949 159 DGVIVATEQQKQDLQKQF----G----------------NYNPIYTIPVGSIDPLKLPAQ-------------FKQRKPH 205 (372)
T ss_pred CEEEEccHHHHHHHHHHh----C----------------CCCceEEEcccccChhhcccc-------------hhhcCCC
Confidence 888888876666554321 1 011267899999987764210 0113566
Q ss_pred EEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEE
Q 002955 337 VMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLI 416 (863)
Q Consensus 337 vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~ 416 (863)
.++++||+.+.||+..+++|+.++.+++|+++ |+.+|.. +....++.. +.+. +....+.+
T Consensus 206 ~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~----l~i~G~g-----~~~~~~~~~----~~~~-------~~~~~v~~ 265 (372)
T cd04949 206 KIITVARLAPEKQLDQLIKAFAKVVKQVPDAT----LDIYGYG-----DEEEKLKEL----IEEL-------GLEDYVFL 265 (372)
T ss_pred eEEEEEccCcccCHHHHHHHHHHHHHhCCCcE----EEEEEeC-----chHHHHHHH----HHHc-------CCcceEEE
Confidence 89999999999999999999999999999877 8878743 222233322 2222 22234556
Q ss_pred cCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccc-cCcccCC---Cc
Q 002955 417 DTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFV-GCSPSLS---GA 492 (863)
Q Consensus 417 ~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~-G~~~~l~---~a 492 (863)
.| ..+++..+|+.||++|+||..||||++.+|||+| |.|+|+|+.. |..+.+. .|
T Consensus 266 ~g--~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~-------------------G~PvI~~~~~~g~~~~v~~~~~G 324 (372)
T cd04949 266 KG--YTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSH-------------------GLPVISYDVNYGPSEIIEDGENG 324 (372)
T ss_pred cC--CCCCHHHHHhhhhEEEecccccccChHHHHHHhC-------------------CCCEEEecCCCCcHHHcccCCCc
Confidence 66 3567999999999999999999999999999999 5678998877 6666662 48
Q ss_pred eEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHH
Q 002955 493 IRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWAR 539 (863)
Q Consensus 493 l~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~ 539 (863)
++++|.|++++|++|..+++.+ +.+....++.++...++++..+++
T Consensus 325 ~lv~~~d~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~~s~~~~~~ 370 (372)
T cd04949 325 YLVPKGDIEALAEAIIELLNDP-KLLQKFSEAAYENAERYSEENVWE 370 (372)
T ss_pred eEeCCCcHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHhhHHHHHh
Confidence 9999999999999999999876 344444555565566666665554
No 90
>PHA01633 putative glycosyl transferase group 1
Probab=99.77 E-value=6.3e-18 Score=185.78 Aligned_cols=194 Identities=17% Similarity=0.194 Sum_probs=140.9
Q ss_pred eccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCC
Q 002955 303 LPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARG 382 (863)
Q Consensus 303 ~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~ 382 (863)
+|.|||.+.|.+... ...+.++++...+.+..++++|+|+++.||+..+++|++++.+++|++..++.|+.+|.
T Consensus 118 I~~GVD~~~f~p~~~--~~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~---- 191 (335)
T PHA01633 118 VFHGINFKIVENAEK--LVPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISH---- 191 (335)
T ss_pred eeCCCChhhcCccch--hhHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcH----
Confidence 467999998863210 11112222222235667899999999999999999999999999999876777876651
Q ss_pred CchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEc--CCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcc
Q 002955 383 RGRDVQEVQSETHATVRRINKIFGRPGYQPVVLID--TPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEK 460 (863)
Q Consensus 383 ~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~--~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~ 460 (863)
. .+ . + .+..+ .|.++. |.++.+++.++|+.||+||+||..||||++++|||+|
T Consensus 192 --~---~~----~----~----l~l~~--~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~------ 246 (335)
T PHA01633 192 --K---QF----T----Q----LEVPA--NVHFVAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAM------ 246 (335)
T ss_pred --H---HH----H----H----cCCCC--cEEEEecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHc------
Confidence 1 11 1 1 11111 244443 6778999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCCccEEecccccCcccCCC---------------------ceEeCCCCHHHHHHHHHHHhCCCHHHHH
Q 002955 461 LDMTLGLDPSTAKSSMLVVSEFVGCSPSLSG---------------------AIRVNPWNIDAVAEAMDSALGVSDAEKQ 519 (863)
Q Consensus 461 ~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~~---------------------al~VnP~d~~~~A~ai~~aL~m~~~er~ 519 (863)
|.|+|+|..+|..+...+ |+.++++|++++|++|.+++.+.+.+
T Consensus 247 -------------G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~~~-- 311 (335)
T PHA01633 247 -------------GTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQDRE-- 311 (335)
T ss_pred -------------CCCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccChh--
Confidence 567888888776664321 45778899999999999998876433
Q ss_pred HHHHHHhhhhccCCHHHHHHHHH
Q 002955 520 MRHEKHYRYVSTHDVAYWARSFL 542 (863)
Q Consensus 520 ~r~~~~~~~v~~~~~~~W~~~~l 542 (863)
+|..+.++..+++++..-+++|+
T Consensus 312 ~~~~~~~~~a~~f~~~~~~~~~~ 334 (335)
T PHA01633 312 ERSMKLKELAKKYDIRNLYTRFL 334 (335)
T ss_pred hhhHHHHHHHHhcCHHHHHHHhh
Confidence 33445567788888888777664
No 91
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=99.76 E-value=2.8e-17 Score=179.90 Aligned_cols=264 Identities=13% Similarity=0.111 Sum_probs=178.9
Q ss_pred hhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHHHHHH
Q 002955 194 EVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSC 273 (863)
Q Consensus 194 ~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~Fl~~ 273 (863)
+..+| |+|++|+.+...+...+.... .++.+..|..++....... +.......+-.+|.+-+.+......+.
T Consensus 80 ~~~~~--d~i~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~d~ii~~s~~~~~~~~-- 151 (348)
T cd03820 80 KNNKP--DVVISFLTSLLTFLASLGLKI--VKLIVSEHNSPDAYKKRLR--RLLLRRLLYRRADAVVVLTEEDRALYY-- 151 (348)
T ss_pred cccCC--CEEEEcCchHHHHHHHHhhcc--ccEEEecCCCccchhhhhH--HHHHHHHHHhcCCEEEEeCHHHHHHhh--
Confidence 33455 999999988222222222221 4788889977654322110 111123334457877776665441110
Q ss_pred HHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCHHHH
Q 002955 274 CSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLK 353 (863)
Q Consensus 274 ~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~ 353 (863)
.....++.++|+|++...+... ...+++.++++||+.+.||+..+
T Consensus 152 --------------------~~~~~~~~vi~~~~~~~~~~~~---------------~~~~~~~i~~~g~~~~~K~~~~l 196 (348)
T cd03820 152 --------------------KKFNKNVVVIPNPLPFPPEEPS---------------SDLKSKRILAVGRLVPQKGFDLL 196 (348)
T ss_pred --------------------ccCCCCeEEecCCcChhhcccc---------------CCCCCcEEEEEEeeccccCHHHH
Confidence 1112356778999998765421 12457789999999999999999
Q ss_pred HHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcc
Q 002955 354 LLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAE 433 (863)
Q Consensus 354 l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~AD 433 (863)
++|++++.+.+|+++ |+.+|. +++...+++ ++.+. +..+.+.+.+. .+++..+|+.||
T Consensus 197 ~~~~~~l~~~~~~~~----l~i~G~-----~~~~~~~~~----~~~~~-------~~~~~v~~~g~--~~~~~~~~~~ad 254 (348)
T cd03820 197 IEAWAKIAKKHPDWK----LRIVGD-----GPEREALEA----LIKEL-------GLEDRVILLGF--TKNIEEYYAKAS 254 (348)
T ss_pred HHHHHHHHhcCCCeE----EEEEeC-----CCCHHHHHH----HHHHc-------CCCCeEEEcCC--cchHHHHHHhCC
Confidence 999999988888766 777773 223223332 33333 23345556665 789999999999
Q ss_pred ceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC-C---CceEeCCCCHHHHHHHHHH
Q 002955 434 CCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-S---GAIRVNPWNIDAVAEAMDS 509 (863)
Q Consensus 434 v~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l-~---~al~VnP~d~~~~A~ai~~ 509 (863)
++++||..||||++++|||+| +.|+|+|...|..+.+ . .|+++++.|+++++++|.+
T Consensus 255 ~~i~ps~~e~~~~~~~Ea~a~-------------------G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ 315 (348)
T cd03820 255 IFVLTSRFEGFPMVLLEAMAF-------------------GLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLR 315 (348)
T ss_pred EEEeCccccccCHHHHHHHHc-------------------CCCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHH
Confidence 999999999999999999999 5678999876655544 2 5899999999999999999
Q ss_pred HhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHH
Q 002955 510 ALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFL 542 (863)
Q Consensus 510 aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l 542 (863)
+++.++ .++...++.++.+..+++..++++|.
T Consensus 316 ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (348)
T cd03820 316 LMEDEE-LRKRMGANARESAERFSIENIIKQWE 347 (348)
T ss_pred HHcCHH-HHHHHHHHHHHHHHHhCHHHHHHHhc
Confidence 998653 33344444567778888888887764
No 92
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.76 E-value=2.7e-17 Score=173.67 Aligned_cols=190 Identities=15% Similarity=0.128 Sum_probs=127.8
Q ss_pred cceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccC-CceEEccCcEEEEeCCcee
Q 002955 592 NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPNYGVD 670 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~-~l~liaenGa~I~~~~~~~ 670 (863)
.|+||+||||||++ ++...++.++++|++| ++.|+.|++||||+...+..+...+. ..++|++||+.|..+..
T Consensus 1 ~KLIftDLDGTLLd---~~~~~~~~a~~aL~~L-k~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p~I~eNGA~I~~p~~-- 74 (302)
T PRK12702 1 MRLVLSSLDGSLLD---LEFNSYGAARQALAAL-ERRSIPLVLYSLRTRAQLEHLCRQLRLEHPFICEDGSAIYVPEH-- 74 (302)
T ss_pred CcEEEEeCCCCCcC---CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHhCCCCeEEEeCCcEEEEccc--
Confidence 47999999999999 5677889999999998 88999999999999999999998773 34799999999997643
Q ss_pred EEe-----------------ecCCCCccHHHHHHHHHHHHhhcCC--------------Cceee------eccceeEeec
Q 002955 671 WET-----------------CVSVPDFSWKQIAEPVMKLYTETTD--------------GSTIE------TKESALVWNF 713 (863)
Q Consensus 671 w~~-----------------~~~~~~~~w~~~v~~i~~~y~~~~~--------------gs~ie------~k~~~l~~~y 713 (863)
|.. .....-..|+..+..+-+.+..... |.-.+ .++++-.+.+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~lg~~y~~ir~~L~~l~~~~~~~f~gF~d~t~~ei~~~TGL~~~~A~~A~~Re~SEp~~w 154 (302)
T PRK12702 75 YFPAGILDEQWQHRPPYYVCALGLPYPCLRHILQQVRQDSHLDLIGFGDWTASELAAATGIPLEEAERAQKREYSEIFSY 154 (302)
T ss_pred cccccccccccccCCCceEEecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCcceEe
Confidence 220 0000011233333333222211000 00000 0111111111
Q ss_pred ccCCCCcchhhHHHHHHHHHHHhcCCCeEEEECCcEEEEec------------------C---CCCHHHHHHHHHHHHhh
Q 002955 714 QYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKP------------------Q---GVNKGLVAQHQLETMHQ 772 (863)
Q Consensus 714 ~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p------------------~---gvsKG~al~~Ll~~l~~ 772 (863)
... ... +.+.+...++.+..|..++.+.. . +++||.|+++|.+.+..
T Consensus 155 ~~~--------~~~----~~~~~~~~g~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~A~~~L~~~y~~ 222 (302)
T PRK12702 155 SGD--------PAR----LREAFAQQEANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQAVQLLLDCYQR 222 (302)
T ss_pred cCC--------HHH----HHHHHHHcCCeEEecCceEEecccccccccccccccccccccccCCCCHHHHHHHHHHHHHh
Confidence 110 011 15556667788889998888886 5 89999999999999844
Q ss_pred cCCCcceEEEEeCCcchHHHHHHhhhhc
Q 002955 773 KGMLPDFVLCIGDDRSDEDMFEVIKSAA 800 (863)
Q Consensus 773 ~gi~~d~vlaiGD~~ND~~Mf~~ag~~~ 800 (863)
.. ..=.++++|||.||++||+++...+
T Consensus 223 ~~-~~~~tiaLGDspND~~mLe~~D~~v 249 (302)
T PRK12702 223 HL-GPIKALGIGCSPPDLAFLRWSEQKV 249 (302)
T ss_pred cc-CCceEEEecCChhhHHHHHhCCeeE
Confidence 33 3348999999999999999998743
No 93
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=99.76 E-value=9.9e-17 Score=177.31 Aligned_cols=262 Identities=15% Similarity=0.161 Sum_probs=177.4
Q ss_pred HHHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHHH
Q 002955 191 KVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHF 270 (863)
Q Consensus 191 ~i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~F 270 (863)
++++..+| |+|++|.+..+.++.....+..++++.+++|-.|+...... .+.. ..|.+-..+....+.|
T Consensus 90 ~~~~~~~~--dii~~~~~~~~~~~~~~~~~~~~~~~i~~~hd~~~~~~~~~------~~~~---~~d~ii~~s~~~~~~~ 158 (359)
T cd03823 90 RLLEDFRP--DVVHFHHLQGLGVSILRAARDRGIPIVLTLHDYWLICPRQG------LFKK---GGDAVIAPSRFLLDRY 158 (359)
T ss_pred HHHHHcCC--CEEEECCccchHHHHHHHHHhcCCCEEEEEeeeeeecchhh------hhcc---CCCEEEEeCHHHHHHH
Confidence 44455566 89999988655444433333346899999997654321111 1111 1277777776555555
Q ss_pred HHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCH
Q 002955 271 LSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGI 350 (863)
Q Consensus 271 l~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi 350 (863)
... + ....++.++|+|+|...+..... ....++.+++++||+.+.||+
T Consensus 159 ~~~-----~---------------~~~~~~~vi~n~~~~~~~~~~~~------------~~~~~~~~i~~~G~~~~~k~~ 206 (359)
T cd03823 159 VAN-----G---------------LFAEKISVIRNGIDLDRAKRPRR------------APPGGRLRFGFIGQLTPHKGV 206 (359)
T ss_pred HHc-----C---------------CCccceEEecCCcChhhcccccc------------CCCCCceEEEEEecCccccCH
Confidence 431 1 11246788999999987642210 112467889999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHH
Q 002955 351 SLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYV 430 (863)
Q Consensus 351 ~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~ 430 (863)
..+++|+.++.+ ++++ |+++|... ......... +..+.+.+.+.++.+++..+|+
T Consensus 207 ~~li~~~~~l~~--~~~~----l~i~G~~~-----~~~~~~~~~--------------~~~~~v~~~g~~~~~~~~~~~~ 261 (359)
T cd03823 207 DLLLEAFKRLPR--GDIE----LVIVGNGL-----ELEEESYEL--------------EGDPRVEFLGAYPQEEIDDFYA 261 (359)
T ss_pred HHHHHHHHHHHh--cCcE----EEEEcCch-----hhhHHHHhh--------------cCCCeEEEeCCCCHHHHHHHHH
Confidence 999999998876 5544 88887432 111111111 1123456778999999999999
Q ss_pred hccceeeccc-ccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC---CceEeCCCCHHHHHHH
Q 002955 431 IAECCLVTAV-RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEA 506 (863)
Q Consensus 431 ~ADv~vvtS~-~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al~VnP~d~~~~A~a 506 (863)
.||++++||. .||++++++|||+| +.|+|+|+.+|..+.+. .|++++|.|+++++++
T Consensus 262 ~ad~~i~ps~~~e~~~~~~~Ea~a~-------------------G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~ 322 (359)
T cd03823 262 EIDVLVVPSIWPENFPLVIREALAA-------------------GVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAA 322 (359)
T ss_pred hCCEEEEcCcccCCCChHHHHHHHC-------------------CCCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHH
Confidence 9999999997 79999999999999 56799999988888773 4899999999999999
Q ss_pred HHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHHH
Q 002955 507 MDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQ 543 (863)
Q Consensus 507 i~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~ 543 (863)
|.++++.+ +.++...+..++.+.. ..+++++++
T Consensus 323 i~~l~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~ 355 (359)
T cd03823 323 LERLIDDP-DLLERLRAGIEPPRSI---EDQAEEYLK 355 (359)
T ss_pred HHHHHhCh-HHHHHHHHhHHHhhhH---HHHHHHHHH
Confidence 99999844 3444444444444432 444444443
No 94
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=99.75 E-value=4.1e-17 Score=183.46 Aligned_cols=240 Identities=15% Similarity=0.131 Sum_probs=163.7
Q ss_pred HHHhhcCCCCCEEEEeCcccchHHHHHHhhC-CCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHH
Q 002955 191 KVMEVISPDDDFVWVHDYHLMVLPTFLRKRF-NRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARH 269 (863)
Q Consensus 191 ~i~~~~~p~~D~VwvhDyhl~llp~~lr~~~-~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~ 269 (863)
++++..+| |+|++|+.....+..++++.. ...++..+.|..++....+. ...+..+|.+-..+..-.+.
T Consensus 78 ~~l~~~~~--Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~--------~~~~~~~d~~i~~S~~~~~~ 147 (359)
T PRK09922 78 KWLKETQP--DIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDHKKHAE--------CKKITCADYHLAISSGIKEQ 147 (359)
T ss_pred HHHHhcCC--CEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCcccccchhh--------hhhhhcCCEEEEcCHHHHHH
Confidence 45566677 999999987777666666543 23456666776554332211 11234678877766554444
Q ss_pred HHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcc--cc
Q 002955 270 FLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMD--IF 347 (863)
Q Consensus 270 Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld--~~ 347 (863)
+.. .|+. ..++.++|+|||.+.+... .+ ...++++++++||+. ..
T Consensus 148 ~~~-----~~~~---------------~~ki~vi~N~id~~~~~~~--~~-----------~~~~~~~i~~~Grl~~~~~ 194 (359)
T PRK09922 148 MMA-----RGIS---------------AQRISVIYNPVEIKTIIIP--PP-----------ERDKPAVFLYVGRLKFEGQ 194 (359)
T ss_pred HHH-----cCCC---------------HHHEEEEcCCCCHHHccCC--Cc-----------ccCCCcEEEEEEEEecccC
Confidence 332 1211 1245668999997654311 01 013467899999996 45
Q ss_pred cCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCC--CHHHH
Q 002955 348 KGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPL--QFYER 425 (863)
Q Consensus 348 KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v--~~~el 425 (863)
||+..+++|+.++. + ++.|+++|. |++.+++ ++++++.| ...-+.+.|.+ +.+++
T Consensus 195 k~~~~l~~a~~~~~---~----~~~l~ivG~-----g~~~~~l----~~~~~~~~-------l~~~v~f~G~~~~~~~~~ 251 (359)
T PRK09922 195 KNVKELFDGLSQTT---G----EWQLHIIGD-----GSDFEKC----KAYSRELG-------IEQRIIWHGWQSQPWEVV 251 (359)
T ss_pred cCHHHHHHHHHhhC---C----CeEEEEEeC-----CccHHHH----HHHHHHcC-------CCCeEEEecccCCcHHHH
Confidence 99999999998762 2 355888883 3443333 34444332 22234555654 55899
Q ss_pred HHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecc-cccCcccCC---CceEeCCCCHH
Q 002955 426 IAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSE-FVGCSPSLS---GAIRVNPWNID 501 (863)
Q Consensus 426 ~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe-~~G~~~~l~---~al~VnP~d~~ 501 (863)
..+|+.||++|+||..||||++++||||| +.|+|+|+ .+|+.+.+. .|++|+|.|++
T Consensus 252 ~~~~~~~d~~v~~s~~Egf~~~~lEAma~-------------------G~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~ 312 (359)
T PRK09922 252 QQKIKNVSALLLTSKFEGFPMTLLEAMSY-------------------GIPCISSDCMSGPRDIIKPGLNGELYTPGNID 312 (359)
T ss_pred HHHHhcCcEEEECCcccCcChHHHHHHHc-------------------CCCEEEeCCCCChHHHccCCCceEEECCCCHH
Confidence 99999999999999999999999999999 56799999 888877773 38999999999
Q ss_pred HHHHHHHHHhCCCH
Q 002955 502 AVAEAMDSALGVSD 515 (863)
Q Consensus 502 ~~A~ai~~aL~m~~ 515 (863)
++|++|.++++.++
T Consensus 313 ~la~~i~~l~~~~~ 326 (359)
T PRK09922 313 EFVGKLNKVISGEV 326 (359)
T ss_pred HHHHHHHHHHhCcc
Confidence 99999999998774
No 95
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=99.74 E-value=1.1e-16 Score=175.88 Aligned_cols=277 Identities=16% Similarity=0.147 Sum_probs=188.6
Q ss_pred HhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcC-CChHHHH-HHHHhCCEecccCHHHHHHH
Q 002955 193 MEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTL-PIRDELL-RALLNADLIGFHTFDYARHF 270 (863)
Q Consensus 193 ~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~l-p~r~eil-~~ll~~dligF~t~~~~~~F 270 (863)
++..+| |+|++|..+..++..++.+.....++.+.+|...+........ .....+- ..+-.+|.+.+.+....+.+
T Consensus 76 ~~~~~~--dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~ 153 (359)
T cd03808 76 LRKERP--DIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVFTSGGLKRRLYLLLERLALRFTDKVIFQNEDDRDLA 153 (359)
T ss_pred HHhcCC--CEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhhccchhHHHHHHHHHHHHHhhccEEEEcCHHHHHHH
Confidence 344566 8999998888777777776566678888888653321110000 0001111 22335788888888777766
Q ss_pred HHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCH
Q 002955 271 LSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGI 350 (863)
Q Consensus 271 l~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi 350 (863)
.+. +.. .....+.+.|+|+|...+..... . ...++.+++++||+.+.||+
T Consensus 154 ~~~-----~~~-------------~~~~~~~~~~~~~~~~~~~~~~~-----~-------~~~~~~~i~~~G~~~~~k~~ 203 (359)
T cd03808 154 LKL-----GII-------------KKKKTVLIPGSGVDLDRFSPSPE-----P-------IPEDDPVFLFVARLLKDKGI 203 (359)
T ss_pred HHh-----cCC-------------CcCceEEecCCCCChhhcCcccc-----c-------cCCCCcEEEEEeccccccCH
Confidence 542 100 01234567799999887642211 0 12467899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHH
Q 002955 351 SLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYV 430 (863)
Q Consensus 351 ~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~ 430 (863)
..+++|++.+.+++|+++ |+.+|.... .+ ..... ++... +..+.+.+.+. .+++..+|+
T Consensus 204 ~~li~~~~~l~~~~~~~~----l~i~G~~~~---~~--~~~~~---~~~~~-------~~~~~v~~~g~--~~~~~~~~~ 262 (359)
T cd03808 204 DELLEAARILKAKGPNVR----LLLVGDGDE---EN--PAAIL---EIEKL-------GLEGRVEFLGF--RDDVPELLA 262 (359)
T ss_pred HHHHHHHHHHHhcCCCeE----EEEEcCCCc---ch--hhHHH---HHHhc-------CCcceEEEeec--cccHHHHHH
Confidence 999999999988888766 888874331 11 11111 11111 11223344444 678999999
Q ss_pred hccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC---CceEeCCCCHHHHHHHH
Q 002955 431 IAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAM 507 (863)
Q Consensus 431 ~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al~VnP~d~~~~A~ai 507 (863)
.||++++||.+||||++++|||+| |.|+|+|+..|..+.+. .|+++++.|+++++++|
T Consensus 263 ~adi~i~ps~~e~~~~~~~Ea~~~-------------------G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i 323 (359)
T cd03808 263 AADVFVLPSYREGLPRVLLEAMAM-------------------GRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAI 323 (359)
T ss_pred hccEEEecCcccCcchHHHHHHHc-------------------CCCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHH
Confidence 999999999999999999999999 56799999999988873 38999999999999999
Q ss_pred HHHhCCCHHHHHHHHHHHhhh-hccCCHHHHHHHHH
Q 002955 508 DSALGVSDAEKQMRHEKHYRY-VSTHDVAYWARSFL 542 (863)
Q Consensus 508 ~~aL~m~~~er~~r~~~~~~~-v~~~~~~~W~~~~l 542 (863)
.+++..+ +.+....++.+++ ...+++..+++.++
T Consensus 324 ~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 324 ERLIEDP-ELRARMGQAARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred HHHHhCH-HHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 9988755 3344444555666 56688888887764
No 96
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=99.73 E-value=2.8e-17 Score=174.66 Aligned_cols=193 Identities=20% Similarity=0.328 Sum_probs=119.8
Q ss_pred cceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc---CCceEEccCcEEEEeCCc
Q 002955 592 NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC---EGLGIAAEHGYFVRPNYG 668 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l---~~l~liaenGa~I~~~~~ 668 (863)
.++|++|+||||++ .+..-..+..+.++ ....+++.++++|||+.....+.+... .+..+|+.+|..|+...
T Consensus 2 ~~ll~sDlD~Tl~~---~~~~~~~~l~~~l~-~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~~~- 76 (247)
T PF05116_consen 2 PRLLASDLDGTLID---GDDEALARLEELLE-QQARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYYGE- 76 (247)
T ss_dssp SEEEEEETBTTTBH---CHHHHHHHHHHHHH-HHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEESS-
T ss_pred CEEEEEECCCCCcC---CCHHHHHHHHHHHH-HhhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEEcC-
Confidence 57999999999993 12222344445555 235889999999999999999988764 23568899999998833
Q ss_pred eeEEeecCCCCccHHHH---------HHHHHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcCC
Q 002955 669 VDWETCVSVPDFSWKQI---------AEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANE 739 (863)
Q Consensus 669 ~~w~~~~~~~~~~w~~~---------v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~ 739 (863)
.|. .+..|.+. +.+++..+.+-.+..-.....+.+.+.+...+ ....++.|++.+...
T Consensus 77 -~~~-----~d~~w~~~i~~~w~~~~v~~~l~~~~~l~~q~~~~q~~~k~sy~~~~~~-------~~~~~~~i~~~l~~~ 143 (247)
T PF05116_consen 77 -NWQ-----PDEEWQAHIDERWDRERVEEILAELPGLRPQPESEQRPFKISYYVDPDD-------SADILEEIRARLRQR 143 (247)
T ss_dssp -TTE-----E-HHHHHHHHTT--HHHHHHHHHCHCCEEEGGCCCGCCTCECEEEETTS-------HCHHHHHHHHHHHCC
T ss_pred -CCc-----ChHHHHHHHHhcCChHHHHHHHHHhhCcccCCccccCCeeEEEEEeccc-------chhHHHHHHHHHHHc
Confidence 121 12233332 22333333211111111112223333333221 122345566666555
Q ss_pred Ce---EEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEe
Q 002955 740 PV---SVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTV 816 (863)
Q Consensus 740 ~~---~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~v 816 (863)
.+ .+.++...++|.|+++|||.|+++|++++ ++++++|+++|||.||++||.... .+|.|
T Consensus 144 ~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~---~~~~~~vl~aGDSgND~~mL~~~~--------------~~vvV 206 (247)
T PF05116_consen 144 GLRVNVIYSNGRDLDILPKGASKGAALRYLMERW---GIPPEQVLVAGDSGNDLEMLEGGD--------------HGVVV 206 (247)
T ss_dssp TCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHH---T--GGGEEEEESSGGGHHHHCCSS--------------EEEE-
T ss_pred CCCeeEEEccceeEEEccCCCCHHHHHHHHHHHh---CCCHHHEEEEeCCCCcHHHHcCcC--------------CEEEE
Confidence 43 34568899999999999999999999999 999999999999999999995543 36788
Q ss_pred CCC
Q 002955 817 GQK 819 (863)
Q Consensus 817 G~~ 819 (863)
|+.
T Consensus 207 ~Na 209 (247)
T PF05116_consen 207 GNA 209 (247)
T ss_dssp TTS
T ss_pred cCC
Confidence 874
No 97
>PLN02846 digalactosyldiacylglycerol synthase
Probab=99.73 E-value=9.2e-17 Score=183.23 Aligned_cols=269 Identities=12% Similarity=0.066 Sum_probs=166.4
Q ss_pred HhhcCCCCCEEEEeCcccchH---HHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHH
Q 002955 193 MEVISPDDDFVWVHDYHLMVL---PTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARH 269 (863)
Q Consensus 193 ~~~~~p~~D~VwvhDyhl~ll---p~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~ 269 (863)
++..+| |+|.+|+--.+.. ...+++++ .. +..++|+.|+.+--+.-.......+...+ ..+++.
T Consensus 112 l~~~~p--DVIHv~tP~~LG~~~~g~~~~~k~-~~-vV~tyHT~y~~Y~~~~~~g~~~~~l~~~~---------~~~~~r 178 (462)
T PLN02846 112 IPDEEA--DIAVLEEPEHLTWYHHGKRWKTKF-RL-VIGIVHTNYLEYVKREKNGRVKAFLLKYI---------NSWVVD 178 (462)
T ss_pred HHhcCC--CEEEEcCchhhhhHHHHHHHHhcC-Cc-EEEEECCChHHHHHHhccchHHHHHHHHH---------HHHHHH
Confidence 345567 9999998655554 34555555 34 77799998854321110001112222111 112222
Q ss_pred HHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh--CC--CeEEEeecCcc
Q 002955 270 FLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF--KG--QIVMLGVDDMD 345 (863)
Q Consensus 270 Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~--~~vil~Vdrld 345 (863)
| .|+.++.++... . ++... +...+.|||.+.|..... . +++.+ .+ .+++++||||.
T Consensus 179 ~--~~d~vi~pS~~~-~-----~l~~~---~i~~v~GVd~~~f~~~~~-----~----~~~~~~~~~~~~~~~l~vGRL~ 238 (462)
T PLN02846 179 I--YCHKVIRLSAAT-Q-----DYPRS---IICNVHGVNPKFLEIGKL-----K----LEQQKNGEQAFTKGAYYIGKMV 238 (462)
T ss_pred H--hcCEEEccCHHH-H-----HHhhC---EEecCceechhhcCCCcc-----c----HhhhcCCCCCcceEEEEEecCc
Confidence 2 144444433211 1 01111 222357999988763211 0 11222 12 35799999999
Q ss_pred cccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHH
Q 002955 346 IFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYER 425 (863)
Q Consensus 346 ~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el 425 (863)
+.||+..+|+||.++.+..|+++ |+++| +|++.+++++.+ .+.+ .. ++++.|..+.+
T Consensus 239 ~eK~~~~Li~a~~~l~~~~~~~~----l~ivG-----dGp~~~~L~~~a----~~l~-------l~-~~vf~G~~~~~-- 295 (462)
T PLN02846 239 WSKGYKELLKLLHKHQKELSGLE----VDLYG-----SGEDSDEVKAAA----EKLE-------LD-VRVYPGRDHAD-- 295 (462)
T ss_pred ccCCHHHHHHHHHHHHhhCCCeE----EEEEC-----CCccHHHHHHHH----HhcC-------Cc-EEEECCCCCHH--
Confidence 99999999999999988888865 88777 566655555544 3332 11 34566655444
Q ss_pred HHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC---CceEeCCCCHHH
Q 002955 426 IAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDA 502 (863)
Q Consensus 426 ~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al~VnP~d~~~ 502 (863)
++|+.+||||+||.+||||+|.+||||| |.|+|++...| .+.+. +|+.+ .|.++
T Consensus 296 -~~~~~~DvFv~pS~~Et~g~v~lEAmA~-------------------G~PVVa~~~~~-~~~v~~~~ng~~~--~~~~~ 352 (462)
T PLN02846 296 -PLFHDYKVFLNPSTTDVVCTTTAEALAM-------------------GKIVVCANHPS-NEFFKQFPNCRTY--DDGKG 352 (462)
T ss_pred -HHHHhCCEEEECCCcccchHHHHHHHHc-------------------CCcEEEecCCC-cceeecCCceEec--CCHHH
Confidence 6899999999999999999999999999 56688888776 45552 35555 48999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHH
Q 002955 503 VAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLE 546 (863)
Q Consensus 503 ~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 546 (863)
++++|.++|+.++.+...+ .+ ..++|..-+++|++.++
T Consensus 353 ~a~ai~~~l~~~~~~~~~~---a~---~~~SWe~~~~~l~~~~~ 390 (462)
T PLN02846 353 FVRATLKALAEEPAPLTDA---QR---HELSWEAATERFLRVAD 390 (462)
T ss_pred HHHHHHHHHccCchhHHHH---HH---HhCCHHHHHHHHHHHhc
Confidence 9999999998554332211 11 36777777777776554
No 98
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=99.72 E-value=4.3e-16 Score=178.70 Aligned_cols=165 Identities=8% Similarity=0.064 Sum_probs=123.4
Q ss_pred CCeEEEeecCcccccCHHHHHHHHHHHHHh------CCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCC
Q 002955 334 GQIVMLGVDDMDIFKGISLKLLAMEQLLSQ------NPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGR 407 (863)
Q Consensus 334 ~~~vil~Vdrld~~KGi~~~l~A~~~ll~~------~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~ 407 (863)
+..++++++|+.+.||+..+++|+..+.+. +|++ .|+++|. |+..+++++ ++++.
T Consensus 231 ~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i----~l~ivG~-----G~~~~~l~~----~~~~~------ 291 (415)
T cd03816 231 RPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKL----LCIITGK-----GPLKEKYLE----RIKEL------ 291 (415)
T ss_pred CceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCE----EEEEEec-----CccHHHHHH----HHHHc------
Confidence 346888999999999999999999998763 3544 4888883 344334444 33333
Q ss_pred CCcccEEEEcCCCCHHHHHHHHHhccceeec---ccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEeccccc
Q 002955 408 PGYQPVVLIDTPLQFYERIAYYVIAECCLVT---AVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVG 484 (863)
Q Consensus 408 ~~~~pv~~~~~~v~~~el~aly~~ADv~vvt---S~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G 484 (863)
+...++++.+.++.+++..+|++||++|++ +..+||+++++||||| +.|+|+|...|
T Consensus 292 -~l~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~-------------------G~PVI~s~~~~ 351 (415)
T cd03816 292 -KLKKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGC-------------------GLPVCALDFKC 351 (415)
T ss_pred -CCCcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHc-------------------CCCEEEeCCCC
Confidence 334578888889999999999999999864 3358899999999999 56799999988
Q ss_pred CcccCC---CceEeCCCCHHHHHHHHHHHhCCC--HHHHHHHHHHHhhhhccCCHHHHHHHHHH
Q 002955 485 CSPSLS---GAIRVNPWNIDAVAEAMDSALGVS--DAEKQMRHEKHYRYVSTHDVAYWARSFLQ 543 (863)
Q Consensus 485 ~~~~l~---~al~VnP~d~~~~A~ai~~aL~m~--~~er~~r~~~~~~~v~~~~~~~W~~~~l~ 543 (863)
+.+.+. +|++|+ |++++|++|.++++++ +++++...++.+++.. ..|.+.+.+
T Consensus 352 ~~eiv~~~~~G~lv~--d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~----~~~~~~~~~ 409 (415)
T cd03816 352 IDELVKHGENGLVFG--DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEESE----LRWDENWDR 409 (415)
T ss_pred HHHHhcCCCCEEEEC--CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhh----cCHHHHHHH
Confidence 888773 488884 9999999999999872 4555555555555543 446555543
No 99
>PHA01630 putative group 1 glycosyl transferase
Probab=99.72 E-value=2.9e-16 Score=174.11 Aligned_cols=211 Identities=14% Similarity=0.081 Sum_probs=148.8
Q ss_pred hCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCC
Q 002955 255 NADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKG 334 (863)
Q Consensus 255 ~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~ 334 (863)
.+|.|-..+......+.+. |+. ...++.++|+|||.+.|..... ...+
T Consensus 94 ~ad~ii~~S~~~~~~l~~~-----g~~--------------~~~~i~vIpNGVd~~~f~~~~~-------------~~~~ 141 (331)
T PHA01630 94 PVDEIVVPSQWSKNAFYTS-----GLK--------------IPQPIYVIPHNLNPRMFEYKPK-------------EKPH 141 (331)
T ss_pred cCCEEEECCHHHHHHHHHc-----CCC--------------CCCCEEEECCCCCHHHcCCCcc-------------ccCC
Confidence 4788887777655554331 110 0124677899999988752210 0134
Q ss_pred CeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEE
Q 002955 335 QIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVV 414 (863)
Q Consensus 335 ~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~ 414 (863)
+.++++++|+.+.||+..+++|++++.+++|+++ |+.+|.. .. +. ++. .+ .+
T Consensus 142 ~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~----llivG~~-----~~--~~--~l~----~~------~~----- 193 (331)
T PHA01630 142 PCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFY----FLIKSSN-----ML--DP--RLF----GL------NG----- 193 (331)
T ss_pred CEEEEEeccccccCCHHHHHHHHHHHHhhCCCEE----EEEEeCc-----cc--ch--hhc----cc------cc-----
Confidence 5567777899999999999999999988888765 8877721 11 11 110 01 11
Q ss_pred EEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC-C--
Q 002955 415 LIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS-G-- 491 (863)
Q Consensus 415 ~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~-~-- 491 (863)
+.+.++.+++..+|+.||+||+||..||||++++||||| |.|+|+|..+|.++.+. +
T Consensus 194 -~~~~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~-------------------G~PVIas~~gg~~E~i~~~~n 253 (331)
T PHA01630 194 -VKTPLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALAL-------------------GLDVVVTEKGAWSEWVLSNLD 253 (331)
T ss_pred -eeccCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHc-------------------CCCEEEeCCCCchhhccCCCc
Confidence 234688999999999999999999999999999999999 56799999888787763 2
Q ss_pred --------------------ceEeCCCCHHHHHHHHHHHhCCC-HHHHHHHHHH-HhhhhccCCHHHHHHHHHHHHH
Q 002955 492 --------------------AIRVNPWNIDAVAEAMDSALGVS-DAEKQMRHEK-HYRYVSTHDVAYWARSFLQDLE 546 (863)
Q Consensus 492 --------------------al~VnP~d~~~~A~ai~~aL~m~-~~er~~r~~~-~~~~v~~~~~~~W~~~~l~~l~ 546 (863)
|++++| |.+++++++.++|..+ +++++.+... .....+++++...++++++-++
T Consensus 254 g~lv~~~~~~~~~~~~~~~~G~~v~~-~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~ 329 (331)
T PHA01630 254 VYWIKSGRKPKLWYTNPIHVGYFLDP-DIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILE 329 (331)
T ss_pred eEEeeecccccccccCCcccccccCC-CHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 444555 7888999999999764 2334443333 4445677999999999887764
No 100
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.71 E-value=1.5e-16 Score=183.73 Aligned_cols=265 Identities=12% Similarity=0.078 Sum_probs=163.7
Q ss_pred hhcCCCCCEEEEeCc-ccchH--HHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHHH
Q 002955 194 EVISPDDDFVWVHDY-HLMVL--PTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHF 270 (863)
Q Consensus 194 ~~~~p~~D~VwvhDy-hl~ll--p~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~F 270 (863)
...+| |+|++|.- ||-.. .....+++. ++...+|+.||.+=-+.-+..-+.++. .++++|
T Consensus 431 ~~f~P--DVVHLatP~~LGw~~~Glr~ArKl~--PVVasyHTny~eYl~~y~~g~L~~~ll-------------k~l~~~ 493 (794)
T PLN02501 431 PSKDA--DIAILEEPEHLNWYHHGKRWTDKFN--HVVGVVHTNYLEYIKREKNGALQAFFV-------------KHINNW 493 (794)
T ss_pred hccCC--CEEEECCchhhccHHHHHHHHHHcC--CeEEEEeCCcHHHHhHhcchhHHHHHH-------------HHHHHH
Confidence 34456 89999864 34444 333444443 699999999985433322222122111 123334
Q ss_pred HHH--HHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh---CCCeEEEeecCcc
Q 002955 271 LSC--CSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMD 345 (863)
Q Consensus 271 l~~--~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld 345 (863)
+.. |.+++.++.... .+. +.+ |. ...|||++.|.+... .. .. .++ ...+.+++||||.
T Consensus 494 v~r~hcD~VIaPS~atq------~L~-~~v-I~-nVnGVDte~F~P~~r---~~----~~-r~lgi~~~~kgiLfVGRLa 556 (794)
T PLN02501 494 VTRAYCHKVLRLSAATQ------DLP-KSV-IC-NVHGVNPKFLKIGEK---VA----EE-RELGQQAFSKGAYFLGKMV 556 (794)
T ss_pred HHHhhCCEEEcCCHHHH------Hhc-ccc-ee-ecccccccccCCcch---hH----HH-HhcCCccccCceEEEEccc
Confidence 333 566666542211 111 111 11 115999998864211 11 11 122 1224589999999
Q ss_pred cccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHH
Q 002955 346 IFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYER 425 (863)
Q Consensus 346 ~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el 425 (863)
+.||+..+|+|+..+.++.|+++ |+++| +|++.+++++. +.+.+ . .|.+ .+.. ++.
T Consensus 557 ~EKGld~LLeAla~L~~~~pnvr----LvIVG-----DGP~reeLe~l----a~eLg-------L-~V~F-LG~~--dd~ 612 (794)
T PLN02501 557 WAKGYRELIDLLAKHKNELDGFN----LDVFG-----NGEDAHEVQRA----AKRLD-------L-NLNF-LKGR--DHA 612 (794)
T ss_pred ccCCHHHHHHHHHHHHhhCCCeE----EEEEc-----CCccHHHHHHH----HHHcC-------C-EEEe-cCCC--CCH
Confidence 99999999999999988888765 88887 45554445444 33332 1 1444 3443 334
Q ss_pred HHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC-C--CceEeCCCCHHH
Q 002955 426 IAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-S--GAIRVNPWNIDA 502 (863)
Q Consensus 426 ~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l-~--~al~VnP~d~~~ 502 (863)
.++|+.|||||+||.+||||+|++||||| |.|+|++...|.. .+ . ++++ +.|.++
T Consensus 613 ~~lyasaDVFVlPS~sEgFGlVlLEAMA~-------------------GlPVVATd~pG~e-~V~~g~nGll--~~D~Ea 670 (794)
T PLN02501 613 DDSLHGYKVFINPSISDVLCTATAEALAM-------------------GKFVVCADHPSNE-FFRSFPNCLT--YKTSED 670 (794)
T ss_pred HHHHHhCCEEEECCCcccchHHHHHHHHc-------------------CCCEEEecCCCCc-eEeecCCeEe--cCCHHH
Confidence 58999999999999999999999999999 5678999888743 34 2 3443 478999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHH
Q 002955 503 VAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQD 544 (863)
Q Consensus 503 ~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~ 544 (863)
++++|.++|..++. + ..++. ...+++..-++++++.
T Consensus 671 fAeAI~~LLsd~~~-r-l~~~a----~~~~SWeAaadrLle~ 706 (794)
T PLN02501 671 FVAKVKEALANEPQ-P-LTPEQ----RYNLSWEAATQRFMEY 706 (794)
T ss_pred HHHHHHHHHhCchh-h-hHHHH----HhhCCHHHHHHHHHHh
Confidence 99999999987652 2 22222 2256767666666543
No 101
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.71 E-value=5.3e-16 Score=172.57 Aligned_cols=258 Identities=17% Similarity=0.156 Sum_probs=171.8
Q ss_pred CEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHH-HHHHHHhCCEecccCHHHHHHHHHHHHhhhC
Q 002955 201 DFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDE-LLRALLNADLIGFHTFDYARHFLSCCSRMLG 279 (863)
Q Consensus 201 D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~e-il~~ll~~dligF~t~~~~~~Fl~~~~r~lg 279 (863)
|+|++|+...+.....+... .+.+..+++|...-....+. ..... .-..+..||.+-..+..+.+.+.. . +
T Consensus 85 Dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~----~-~ 156 (357)
T cd03795 85 DVIHLHFPNPLADLALLLLP-RKKPVVVHWHSDIVKQKLLL--KLYRPLQRRFLRRADAIVATSPNYAETSPV----L-R 156 (357)
T ss_pred CEEEEecCcchHHHHHHHhc-cCceEEEEEcChhhccchhh--hhhhHHHHHHHHhcCEEEeCcHHHHHHHHH----h-c
Confidence 89999976544332222222 46788899996432221110 11111 223456688888777766654432 0 0
Q ss_pred ceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCHHHHHHHHHH
Q 002955 280 VSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQ 359 (863)
Q Consensus 280 ~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ 359 (863)
....++.++|+|+|...+..... . .........++.+|+++||+.+.||+..+++|+++
T Consensus 157 ---------------~~~~~~~~i~~gi~~~~~~~~~~---~---~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~ 215 (357)
T cd03795 157 ---------------RFRDKVRVIPLGLDPARYPRPDA---L---EEAIWRRAAGRPFFLFVGRLVYYKGLDVLLEAAAA 215 (357)
T ss_pred ---------------CCccceEEecCCCChhhcCCcch---h---hhHhhcCCCCCcEEEEecccccccCHHHHHHHHHh
Confidence 11135678899999887653211 1 01111112567899999999999999999999988
Q ss_pred HHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecc
Q 002955 360 LLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTA 439 (863)
Q Consensus 360 ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS 439 (863)
+. ++.|+.+|. ++... ++.+++.+. +..+-+.+.|.++.+++..+|+.||++++||
T Consensus 216 l~--------~~~l~i~G~-----g~~~~----~~~~~~~~~-------~~~~~V~~~g~v~~~~~~~~~~~ad~~i~ps 271 (357)
T cd03795 216 LP--------DAPLVIVGE-----GPLEA----ELEALAAAL-------GLLDRVRFLGRLDDEEKAALLAACDVFVFPS 271 (357)
T ss_pred cc--------CcEEEEEeC-----ChhHH----HHHHHHHhc-------CCcceEEEcCCCCHHHHHHHHHhCCEEEeCC
Confidence 63 455888873 23222 333333222 2233456788999999999999999999999
Q ss_pred c--ccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC----CceEeCCCCHHHHHHHHHHHhCC
Q 002955 440 V--RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS----GAIRVNPWNIDAVAEAMDSALGV 513 (863)
Q Consensus 440 ~--~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~----~al~VnP~d~~~~A~ai~~aL~m 513 (863)
. .||||++++|||+| +.|+|+|+..|..+.+. .|++++|.|+++++++|.++++.
T Consensus 272 ~~~~e~~g~~~~Ea~~~-------------------g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~~ 332 (357)
T cd03795 272 VERSEAFGIVLLEAMAF-------------------GKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLLED 332 (357)
T ss_pred cccccccchHHHHHHHc-------------------CCCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHHHC
Confidence 6 59999999999999 56799999888887662 37899999999999999999986
Q ss_pred CHHHHHHHHHHHhhhhcc
Q 002955 514 SDAEKQMRHEKHYRYVST 531 (863)
Q Consensus 514 ~~~er~~r~~~~~~~v~~ 531 (863)
+ ++++...++.++++.+
T Consensus 333 ~-~~~~~~~~~~~~~~~~ 349 (357)
T cd03795 333 P-ELRERLGEAARERAEE 349 (357)
T ss_pred H-HHHHHHHHHHHHHHHH
Confidence 5 4444445555655543
No 102
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=99.70 E-value=5.2e-16 Score=169.88 Aligned_cols=247 Identities=19% Similarity=0.164 Sum_probs=165.7
Q ss_pred hhcCCCCCEEEEeCc-ccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHHHHH
Q 002955 194 EVISPDDDFVWVHDY-HLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLS 272 (863)
Q Consensus 194 ~~~~p~~D~VwvhDy-hl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~Fl~ 272 (863)
...+| |+|++|++ ...++. .+..+. +.++.+.+|..++...... .+........+..+|.+-+.+....+.+.+
T Consensus 78 ~~~~~--dii~~~~~~~~~~~~-~~~~~~-~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~ 152 (353)
T cd03811 78 RKEKP--DVVISHLTTTPNVLA-LLAARL-GTKLIVWEHNSLSLELKRK-LRLLLLIRKLYRRADKIVAVSEGVKEDLLK 152 (353)
T ss_pred HhcCC--CEEEEcCccchhHHH-HHHhhc-CCceEEEEcCcchhhhccc-hhHHHHHHhhccccceEEEeccchhhhHHH
Confidence 33456 99999998 444444 444444 7899999998876432111 111112334456688888777766655543
Q ss_pred HHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCHHH
Q 002955 273 CCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISL 352 (863)
Q Consensus 273 ~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~ 352 (863)
.. + ....++.++|+|+|...+...... .. . .....++.+++++||+++.||+..
T Consensus 153 ~~----~---------------~~~~~~~vi~~~~~~~~~~~~~~~-----~~-~-~~~~~~~~~i~~~g~~~~~k~~~~ 206 (353)
T cd03811 153 LL----G---------------IPPDKIEVIYNPIDIEEIRALAEE-----PL-E-LGIPPDGPVILAVGRLSPQKGFDT 206 (353)
T ss_pred hh----c---------------CCccccEEecCCcChhhcCcccch-----hh-h-cCCCCCceEEEEEecchhhcChHH
Confidence 21 1 113467788999998877532110 00 0 011256789999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhc
Q 002955 353 KLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIA 432 (863)
Q Consensus 353 ~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~A 432 (863)
.++|++++.+++++++ |+.+|.. +...+++ +++.+.+ ..+.+.+.+.+ +++..+|+.|
T Consensus 207 ~i~~~~~l~~~~~~~~----l~i~G~~-----~~~~~~~----~~~~~~~-------~~~~v~~~g~~--~~~~~~~~~~ 264 (353)
T cd03811 207 LIRAFALLRKEGPDAR----LVILGDG-----PLREELE----ALAKELG-------LADRVHFLGFQ--SNPYPYLKAA 264 (353)
T ss_pred HHHHHHHhhhcCCCce----EEEEcCC-----ccHHHHH----HHHHhcC-------CCccEEEeccc--CCHHHHHHhC
Confidence 9999999988877765 8877732 2323333 3333332 22334455554 4688999999
Q ss_pred cceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC---CceEeCCCCHHHHHHHHHH
Q 002955 433 ECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAMDS 509 (863)
Q Consensus 433 Dv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al~VnP~d~~~~A~ai~~ 509 (863)
|++|.||..||||++++|||+| +.|+|+|+..|..+.+. .|++++|.|.+++++++..
T Consensus 265 d~~i~ps~~e~~~~~~~Ea~~~-------------------G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~ 325 (353)
T cd03811 265 DLFVLSSRYEGFPNVLLEAMAL-------------------GTPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALA 325 (353)
T ss_pred CEEEeCcccCCCCcHHHHHHHh-------------------CCCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHH
Confidence 9999999999999999999999 56799999998888773 4899999999999544444
Q ss_pred HhC
Q 002955 510 ALG 512 (863)
Q Consensus 510 aL~ 512 (863)
+..
T Consensus 326 i~~ 328 (353)
T cd03811 326 LLD 328 (353)
T ss_pred HHh
Confidence 443
No 103
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.69 E-value=1.5e-15 Score=173.18 Aligned_cols=189 Identities=15% Similarity=0.151 Sum_probs=134.6
Q ss_pred EEEEeccccCchHHHhhcCCchHHHHHHHHHHHh-CCCeEEEeecCcccccCHHHHH----HHHHHHHHhCCCCCCceEE
Q 002955 299 SIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF-KGQIVMLGVDDMDIFKGISLKL----LAMEQLLSQNPSKRGKIVL 373 (863)
Q Consensus 299 ~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~~~vil~Vdrld~~KGi~~~l----~A~~~ll~~~p~~~~~vvL 373 (863)
++.++|+|||.+.|......+ ..+ .++++|+++||+++.||+..++ .++..+.+++|+++ |
T Consensus 197 ~v~vipngvd~~~f~~~~~~~----------~~~~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~----l 262 (397)
T TIGR03087 197 RITAFPNGVDADFFSPDRDYP----------NPYPPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAE----F 262 (397)
T ss_pred CeEEeecccchhhcCCCcccc----------CCCCCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcE----E
Confidence 567789999998885321100 111 3567899999999999999887 56667777889877 8
Q ss_pred EEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeeccc-ccCCCccceeee
Q 002955 374 VQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAV-RDGMNLIPYEYI 452 (863)
Q Consensus 374 vqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~-~EGmnLv~~Ea~ 452 (863)
+++|.. +. . ++.++.. .+-+.+.|.++ ++..+|+.||++|+||. .||++++++|||
T Consensus 263 ~ivG~g-----~~-~----~~~~l~~-----------~~~V~~~G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lEAm 319 (397)
T TIGR03087 263 YIVGAK-----PS-P----AVRALAA-----------LPGVTVTGSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLEAM 319 (397)
T ss_pred EEECCC-----Ch-H----HHHHhcc-----------CCCeEEeeecC--CHHHHHHhCCEEEecccccCCcccHHHHHH
Confidence 888732 22 1 2222211 11134567776 68999999999999996 699999999999
Q ss_pred eeecCCcccccccCCCCCCCCCccEEecccccCcccC--CCceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhh-
Q 002955 453 ICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL--SGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYV- 529 (863)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l--~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v- 529 (863)
+| |.|+|+|..++..... ..|+++. .|++++|++|.++++.+ +.++...++.++++
T Consensus 320 a~-------------------G~PVV~t~~~~~~i~~~~~~g~lv~-~~~~~la~ai~~ll~~~-~~~~~~~~~ar~~v~ 378 (397)
T TIGR03087 320 AM-------------------AKPVVASPEAAEGIDALPGAELLVA-ADPADFAAAILALLANP-AEREELGQAARRRVL 378 (397)
T ss_pred Hc-------------------CCCEEecCcccccccccCCcceEeC-CCHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHH
Confidence 99 5668888764322111 2478885 89999999999999754 44555566677777
Q ss_pred ccCCHHHHHHHHHHHH
Q 002955 530 STHDVAYWARSFLQDL 545 (863)
Q Consensus 530 ~~~~~~~W~~~~l~~l 545 (863)
..+++...++++.+-+
T Consensus 379 ~~fsw~~~~~~~~~~l 394 (397)
T TIGR03087 379 QHYHWPRNLARLDALL 394 (397)
T ss_pred HhCCHHHHHHHHHHHh
Confidence 4689998888876654
No 104
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.69 E-value=1.1e-15 Score=170.82 Aligned_cols=245 Identities=16% Similarity=0.170 Sum_probs=161.1
Q ss_pred CCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCC----ChhHh-hcCCC-------------hHHHHHHHHhCCEecc
Q 002955 200 DDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFP----SSEIY-RTLPI-------------RDELLRALLNADLIGF 261 (863)
Q Consensus 200 ~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP----~~e~~-r~lp~-------------r~eil~~ll~~dligF 261 (863)
.|+|+++.. .+....+ ..++.+..+++|.|.+ ..+.+ ...+. +.-..+.+-.+|.|..
T Consensus 84 ~D~v~~~~~--~~~~~~~--~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~ 159 (351)
T cd03804 84 YDLVISSSH--AVAKGVI--TRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAARVDYFIA 159 (351)
T ss_pred CCEEEEcCc--HHhcccc--CCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 489977643 2222222 4457888899998631 11111 11110 0011123456777777
Q ss_pred cCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEee
Q 002955 262 HTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGV 341 (863)
Q Consensus 262 ~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~V 341 (863)
.+....+.+... . +. ...++|+|+|.+.|.... ..+++++++
T Consensus 160 ~S~~~~~~~~~~----~----------------~~--~~~vi~~~~d~~~~~~~~----------------~~~~~il~~ 201 (351)
T cd03804 160 NSRFVARRIKKY----Y----------------GR--DATVIYPPVDTDRFTPAE----------------EKEDYYLSV 201 (351)
T ss_pred CCHHHHHHHHHH----h----------------CC--CcEEECCCCCHhhcCcCC----------------CCCCEEEEE
Confidence 776655555321 1 11 124678999988764210 234579999
Q ss_pred cCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCC
Q 002955 342 DDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQ 421 (863)
Q Consensus 342 drld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~ 421 (863)
||+.+.||+..+++|++++ | ++ |+.+|. +++.+++++ .. .+-+.+.|.++
T Consensus 202 G~~~~~K~~~~li~a~~~~----~-~~----l~ivG~-----g~~~~~l~~-------~~---------~~~V~~~g~~~ 251 (351)
T cd03804 202 GRLVPYKRIDLAIEAFNKL----G-KR----LVVIGD-----GPELDRLRA-------KA---------GPNVTFLGRVS 251 (351)
T ss_pred EcCccccChHHHHHHHHHC----C-Cc----EEEEEC-----ChhHHHHHh-------hc---------CCCEEEecCCC
Confidence 9999999999999999865 4 44 787873 333333322 11 12245668999
Q ss_pred HHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC-C--CceEeCCC
Q 002955 422 FYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-S--GAIRVNPW 498 (863)
Q Consensus 422 ~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l-~--~al~VnP~ 498 (863)
.+++.++|+.||++++||. ||||++++|||+| +.|+|+|..+|..+.+ . .|++++|.
T Consensus 252 ~~~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~-------------------G~Pvi~~~~~~~~e~i~~~~~G~~~~~~ 311 (351)
T cd03804 252 DEELRDLYARARAFLFPAE-EDFGIVPVEAMAS-------------------GTPVIAYGKGGALETVIDGVTGILFEEQ 311 (351)
T ss_pred HHHHHHHHHhCCEEEECCc-CCCCchHHHHHHc-------------------CCCEEEeCCCCCcceeeCCCCEEEeCCC
Confidence 9999999999999999999 9999999999999 5679999998888777 2 48999999
Q ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHHH
Q 002955 499 NIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARS 540 (863)
Q Consensus 499 d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~ 540 (863)
|++++|++|..++++++.. .+.+++....+++....++
T Consensus 312 ~~~~la~~i~~l~~~~~~~----~~~~~~~~~~~~~~~~~~~ 349 (351)
T cd03804 312 TVESLAAAVERFEKNEDFD----PQAIRAHAERFSESRFREK 349 (351)
T ss_pred CHHHHHHHHHHHHhCcccC----HHHHHHHHHhcCHHHHHHH
Confidence 9999999999999877411 2233333444555554443
No 105
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=99.68 E-value=1.3e-15 Score=168.08 Aligned_cols=246 Identities=15% Similarity=0.075 Sum_probs=162.8
Q ss_pred HHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHHHH
Q 002955 192 VMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFL 271 (863)
Q Consensus 192 i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~Fl 271 (863)
+++..++ |+|++|+....++ + .+..+.++.+.+|..++.... .........+.+-+-+....+.+.
T Consensus 82 ~~~~~~~--Divh~~~~~~~~~---~-~~~~~~~~v~~~h~~~~~~~~--------~~~~~~~~~~~~~~~s~~~~~~~~ 147 (335)
T cd03802 82 ALAAGDF--DIVHNHSLHLPLP---F-ARPLPVPVVTTLHGPPDPELL--------KLYYAARPDVPFVSISDAQRRPWP 147 (335)
T ss_pred HHhcCCC--CEEEecCcccchh---h-hcccCCCEEEEecCCCCcccc--------hHHHhhCcCCeEEEecHHHHhhcc
Confidence 3344455 9999999888776 2 334568899999987643211 122333334433322222111100
Q ss_pred HHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCHH
Q 002955 272 SCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGIS 351 (863)
Q Consensus 272 ~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~ 351 (863)
.. .++.++|+|+|++.|... ..++..++++||+.+.||+.
T Consensus 148 -----------------------~~-~~~~vi~ngvd~~~~~~~----------------~~~~~~i~~~Gr~~~~Kg~~ 187 (335)
T cd03802 148 -----------------------PL-PWVATVHNGIDLDDYPFR----------------GPKGDYLLFLGRISPEKGPH 187 (335)
T ss_pred -----------------------cc-cccEEecCCcChhhCCCC----------------CCCCCEEEEEEeeccccCHH
Confidence 00 456789999999887520 13466899999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHh
Q 002955 352 LKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVI 431 (863)
Q Consensus 352 ~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ 431 (863)
.+++|+.+ ++++ |+++|... ....+...+.+... ..+-+.+.|.++..++..+|+.
T Consensus 188 ~li~~~~~-----~~~~----l~i~G~~~-----~~~~~~~~~~~~~~----------~~~~v~~~G~~~~~~~~~~~~~ 243 (335)
T cd03802 188 LAIRAARR-----AGIP----LKLAGPVS-----DPDYFYREIAPELL----------DGPDIEYLGEVGGAEKAELLGN 243 (335)
T ss_pred HHHHHHHh-----cCCe----EEEEeCCC-----CHHHHHHHHHHhcc----------cCCcEEEeCCCCHHHHHHHHHh
Confidence 99998754 3444 88887432 21222222221110 1123466789999999999999
Q ss_pred ccceeeccc-ccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC---CceEeCCCCHHHHHHHH
Q 002955 432 AECCLVTAV-RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAM 507 (863)
Q Consensus 432 ADv~vvtS~-~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al~VnP~d~~~~A~ai 507 (863)
||++|+||. .||||++++|||+| +.|+|+|+.+|..+.+. .|+++++ +++++++|
T Consensus 244 ~d~~v~ps~~~E~~~~~~lEAma~-------------------G~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l 302 (335)
T cd03802 244 ARALLFPILWEEPFGLVMIEAMAC-------------------GTPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAV 302 (335)
T ss_pred CcEEEeCCcccCCcchHHHHHHhc-------------------CCCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHH
Confidence 999999997 59999999999999 56799999999888773 4789987 99999999
Q ss_pred HHHhCCCHHHHHHHHHHHhhh-hccCCHHHHHHHHHH
Q 002955 508 DSALGVSDAEKQMRHEKHYRY-VSTHDVAYWARSFLQ 543 (863)
Q Consensus 508 ~~aL~m~~~er~~r~~~~~~~-v~~~~~~~W~~~~l~ 543 (863)
.+++.++.+. .++. ...+++..-++++++
T Consensus 303 ~~l~~~~~~~-------~~~~~~~~~s~~~~~~~~~~ 332 (335)
T cd03802 303 ARADRLDRAA-------CRRRAERRFSAARMVDDYLA 332 (335)
T ss_pred HHHhccHHHH-------HHHHHHHhCCHHHHHHHHHH
Confidence 9987654221 1122 245676666666654
No 106
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.68 E-value=2.5e-15 Score=167.70 Aligned_cols=265 Identities=13% Similarity=0.024 Sum_probs=170.1
Q ss_pred CEEEEeCcccch--HHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHH-----HHHHhCCEecccCHHHHHHHHHH
Q 002955 201 DFVWVHDYHLMV--LPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELL-----RALLNADLIGFHTFDYARHFLSC 273 (863)
Q Consensus 201 D~VwvhDyhl~l--lp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil-----~~ll~~dligF~t~~~~~~Fl~~ 273 (863)
|+++||...... +..++++ .+.++.+.+|..-.....+.. ....++ ..+-.+|.|-..+....+.+...
T Consensus 86 ~~~~i~~~~~~~~~~~~~~~~--~~~~~v~~~h~~~~~~~~~~~--~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~ 161 (363)
T cd04955 86 DIDHVHALGPAIAPFLPLLRL--KGKKVVVNMDGLEWKRAKWGR--PAKRYLKFGEKLAVKFADRLIADSPGIKEYLKEK 161 (363)
T ss_pred CeEEEEecCccHHHHHHHHHh--cCCCEEEEccCcceeeccccc--chhHHHHHHHHHHHhhccEEEeCCHHHHHHHHHh
Confidence 566666555443 3333333 368899998852111111110 011111 23446788877776444443221
Q ss_pred HHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh--CCCeEEEeecCcccccCHH
Q 002955 274 CSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF--KGQIVMLGVDDMDIFKGIS 351 (863)
Q Consensus 274 ~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~~~vil~Vdrld~~KGi~ 351 (863)
.| .. . .++|+|+|...+.. ....++.+ ..++.++++||+.+.||+.
T Consensus 162 ----~~---------------~~-~--~~i~ngv~~~~~~~----------~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~ 209 (363)
T cd04955 162 ----YG---------------RD-S--TYIPYGADHVVSSE----------EDEILKKYGLEPGRYYLLVGRIVPENNID 209 (363)
T ss_pred ----cC---------------CC-C--eeeCCCcChhhcch----------hhhhHHhcCCCCCcEEEEEecccccCCHH
Confidence 11 11 1 67899999876532 01112222 3456788999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHh
Q 002955 352 LKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVI 431 (863)
Q Consensus 352 ~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ 431 (863)
.+++|+.++.. ++.|+++|... ...++.+.+.+ +++. .+-+.+.|.++.+++..+|+.
T Consensus 210 ~li~a~~~l~~-------~~~l~ivG~~~-----~~~~~~~~~~~-------~~~~---~~~V~~~g~~~~~~~~~~~~~ 267 (363)
T cd04955 210 DLIEAFSKSNS-------GKKLVIVGNAD-----HNTPYGKLLKE-------KAAA---DPRIIFVGPIYDQELLELLRY 267 (363)
T ss_pred HHHHHHHhhcc-------CceEEEEcCCC-----CcchHHHHHHH-------HhCC---CCcEEEccccChHHHHHHHHh
Confidence 99999987632 34588888532 11223333221 1111 234566789999999999999
Q ss_pred ccceeecccc-cCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC-CCceEeCCCCHHHHHHHHHH
Q 002955 432 AECCLVTAVR-DGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-SGAIRVNPWNIDAVAEAMDS 509 (863)
Q Consensus 432 ADv~vvtS~~-EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l-~~al~VnP~d~~~~A~ai~~ 509 (863)
||++++||.. ||||++++|||+| +.|+|+|..+|..+.+ .++..++|.|. +|++|.+
T Consensus 268 ad~~v~ps~~~e~~~~~~~EAma~-------------------G~PvI~s~~~~~~e~~~~~g~~~~~~~~--l~~~i~~ 326 (363)
T cd04955 268 AALFYLHGHSVGGTNPSLLEAMAY-------------------GCPVLASDNPFNREVLGDKAIYFKVGDD--LASLLEE 326 (363)
T ss_pred CCEEEeCCccCCCCChHHHHHHHc-------------------CCCEEEecCCccceeecCCeeEecCchH--HHHHHHH
Confidence 9999999999 9999999999999 5679999998887777 45888888776 9999999
Q ss_pred HhCCCHHHHHHHHHHHhhhhc-cCCHHHHHHHHHHHH
Q 002955 510 ALGVSDAEKQMRHEKHYRYVS-THDVAYWARSFLQDL 545 (863)
Q Consensus 510 aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~l~~l 545 (863)
+++.++. +....++.++++. .+++..-++++++.+
T Consensus 327 l~~~~~~-~~~~~~~~~~~~~~~fs~~~~~~~~~~~y 362 (363)
T cd04955 327 LEADPEE-VSAMAKAARERIREKYTWEKIADQYEELY 362 (363)
T ss_pred HHhCHHH-HHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 9987643 3333444555554 488888777776543
No 107
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=99.68 E-value=1.5e-15 Score=169.55 Aligned_cols=194 Identities=16% Similarity=0.191 Sum_probs=140.3
Q ss_pred EEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh---CCCeEEEeecCccc--ccCHHHHHHHHHHHHHh-CCCCCCce
Q 002955 298 VSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMDI--FKGISLKLLAMEQLLSQ-NPSKRGKI 371 (863)
Q Consensus 298 ~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~--~KGi~~~l~A~~~ll~~-~p~~~~~v 371 (863)
.++.++|+|||...+... .. ...++.+ .++.+++.+++... .||+..+++|++.+.++ .|+ +
T Consensus 159 ~~~~vi~ngi~~~~~~~~-----~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~~----~ 226 (365)
T cd03825 159 IPIEVIPNGIDTTIFRPR-----DK---REARKRLGLPADKKIILFGAVGGTDPRKGFDELIEALKRLAERWKDD----I 226 (365)
T ss_pred CceEEeCCCCcccccCCC-----cH---HHHHHHhCCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhccCCC----e
Confidence 367789999999877421 11 1223333 34566666666654 89999999999988665 344 4
Q ss_pred EEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCC-HHHHHHHHHhccceeecccccCCCcccee
Q 002955 372 VLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQ-FYERIAYYVIAECCLVTAVRDGMNLIPYE 450 (863)
Q Consensus 372 vLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~-~~el~aly~~ADv~vvtS~~EGmnLv~~E 450 (863)
.++.+|... .... . .. ...+.+.|.++ .+++..+|+.||+++.||..||||++++|
T Consensus 227 ~~~i~G~~~-----~~~~--~-------~~---------~~~v~~~g~~~~~~~~~~~~~~ad~~l~ps~~e~~g~~~~E 283 (365)
T cd03825 227 ELVVFGASD-----PEIP--P-------DL---------PFPVHYLGSLNDDESLALIYSAADVFVVPSLQENFPNTAIE 283 (365)
T ss_pred EEEEeCCCc-----hhhh--c-------cC---------CCceEecCCcCCHHHHHHHHHhCCEEEeccccccccHHHHH
Confidence 588777432 1000 0 01 11245667777 88999999999999999999999999999
Q ss_pred eeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC---CceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhh
Q 002955 451 YIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYR 527 (863)
Q Consensus 451 a~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~ 527 (863)
||+| +.|+|+|..+|..+.+. .|+++++.|++++|++|.++++.+ +++....++.++
T Consensus 284 am~~-------------------g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~~-~~~~~~~~~~~~ 343 (365)
T cd03825 284 ALAC-------------------GTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLADP-DEREELGEAARE 343 (365)
T ss_pred HHhc-------------------CCCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHH
Confidence 9999 56799999988888773 489999999999999999999754 344444555566
Q ss_pred hh-ccCCHHHHHHHHHHHHH
Q 002955 528 YV-STHDVAYWARSFLQDLE 546 (863)
Q Consensus 528 ~v-~~~~~~~W~~~~l~~l~ 546 (863)
++ ..+++...++++++-++
T Consensus 344 ~~~~~~s~~~~~~~~~~~y~ 363 (365)
T cd03825 344 LAENEFDSRVQAKRYLSLYE 363 (365)
T ss_pred HHHHhcCHHHHHHHHHHHHh
Confidence 65 45888888888876554
No 108
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=99.64 E-value=1.3e-14 Score=165.75 Aligned_cols=293 Identities=20% Similarity=0.197 Sum_probs=196.6
Q ss_pred CEEEEeCcccchHHHHHHhh---CCCCeEEEEEeCC-----CC-ChhHhhcCCC---h----------HHHHHHHHhCCE
Q 002955 201 DFVWVHDYHLMVLPTFLRKR---FNRVKLGFFLHSP-----FP-SSEIYRTLPI---R----------DELLRALLNADL 258 (863)
Q Consensus 201 D~VwvhDyhl~llp~~lr~~---~~~~~i~~flH~P-----fP-~~e~~r~lp~---r----------~eil~~ll~~dl 258 (863)
|+|++||||+.|+|.++++. ...++..|+.|-= || ...-.-.||. . .-+--|+..||.
T Consensus 132 DIvH~hDWqt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ad~ 211 (487)
T COG0297 132 DIVHAHDWQTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYADA 211 (487)
T ss_pred CEEEeecHHHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheeccE
Confidence 99999999999999999997 7789999999932 23 1222223441 1 123345666777
Q ss_pred ecccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcC-----------CchHHHHHHH
Q 002955 259 IGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLN-----------LPETEAKVAE 327 (863)
Q Consensus 259 igF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~-----------~~~~~~~~~~ 327 (863)
|.--++.|+..-... ..|-- -.| .+.+ +.-.+.-+=+|||.....+... .+........
T Consensus 212 vttVSptYa~Ei~t~---~~g~g---l~g--~l~~--~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~ 281 (487)
T COG0297 212 VTTVSPTYAGEIYTP---EYGEG---LEG--LLSW--RSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVA 281 (487)
T ss_pred EEEECHHHHHhhccc---ccccc---chh--hhhh--ccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHH
Confidence 777777777654410 00000 000 0111 1134445567777665532111 0012223344
Q ss_pred HHHHh-----CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHh
Q 002955 328 LQDQF-----KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRIN 402 (863)
Q Consensus 328 l~~~~-----~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN 402 (863)
|++.+ .+.+++..|+|++..||++.+++|++.++++. ++ ||.+|.+ -..+...+..++.++.
T Consensus 282 L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~~----~vilG~g-------d~~le~~~~~la~~~~ 348 (487)
T COG0297 282 LQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--WQ----LVLLGTG-------DPELEEALRALASRHP 348 (487)
T ss_pred HHHHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--ce----EEEEecC-------cHHHHHHHHHHHHhcC
Confidence 55655 24589999999999999999999999999987 55 8888843 1467788888888886
Q ss_pred hccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEeccc
Q 002955 403 KIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEF 482 (863)
Q Consensus 403 ~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~ 482 (863)
.++ .+.-..+..-...+|..||++++||..|++||+-+++|.- ++++|+.+.
T Consensus 349 ~~~---------~~~i~~~~~la~~i~agaD~~lmPSrfEPcGL~ql~amry-------------------GtvpIv~~t 400 (487)
T COG0297 349 GRV---------LVVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRY-------------------GTLPIVRET 400 (487)
T ss_pred ceE---------EEEeeecHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHc-------------------CCcceEccc
Confidence 543 2222345666678999999999999999999999999997 678999999
Q ss_pred ccCcccCC-----------CceEeCCCCHHHHHHHHHHHhCCCHH----HHHHHHHHHhhhhccCCHHHHHHHHHHHHHH
Q 002955 483 VGCSPSLS-----------GAIRVNPWNIDAVAEAMDSALGVSDA----EKQMRHEKHYRYVSTHDVAYWARSFLQDLER 547 (863)
Q Consensus 483 ~G~~~~l~-----------~al~VnP~d~~~~A~ai~~aL~m~~~----er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 547 (863)
+|.++.+. .|+++.|.|.++++.||.+|+..-.. .+..+..+|. ...++..=++++..--+.
T Consensus 401 GGLadTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~rA~~~y~~~~~~w~~~~~~~m~---~d~sw~~sa~~y~~lY~~ 477 (487)
T COG0297 401 GGLADTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRALVLYRAPPLLWRKVQPNAMG---ADFSWDLSAKEYVELYKP 477 (487)
T ss_pred CCccceecCccchhccCceeEEEEecCCHHHHHHHHHHHHHHhhCCHHHHHHHHHhhcc---cccCchhHHHHHHHHHHH
Confidence 99998873 27888888999999999999976322 2222222332 356666667766654444
No 109
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.64 E-value=2.4e-14 Score=164.87 Aligned_cols=287 Identities=19% Similarity=0.184 Sum_probs=176.1
Q ss_pred HHHHHHhhcCCCCCEEEEeCcccchHHHHHHh-hCCCCeEEEEEeCCCC-ChhHhhcCCChHHHHHHHH-hCCEecccCH
Q 002955 188 FADKVMEVISPDDDFVWVHDYHLMVLPTFLRK-RFNRVKLGFFLHSPFP-SSEIYRTLPIRDELLRALL-NADLIGFHTF 264 (863)
Q Consensus 188 fa~~i~~~~~p~~D~VwvhDyhl~llp~~lr~-~~~~~~i~~flH~PfP-~~e~~r~lp~r~eil~~ll-~~dligF~t~ 264 (863)
...++++..+| |+|++|.+.++ |.++.. +..++++.+..|.-.+ +...|+.+ ..+.+.++ .+|.|..++.
T Consensus 115 ~~~~~l~~~~P--d~v~~~~~~~~--~~~l~~~~~~~ip~vl~~~~~~~~s~~~~~~~---~~~~r~~~~~~d~ii~~S~ 187 (425)
T PRK05749 115 AVRRFLRFWRP--KLVIIMETELW--PNLIAELKRRGIPLVLANARLSERSFKRYQKF---KRFYRLLFKNIDLVLAQSE 187 (425)
T ss_pred HHHHHHHhhCC--CEEEEEecchh--HHHHHHHHHCCCCEEEEeccCChhhHHHHHHH---HHHHHHHHHhCCEEEECCH
Confidence 44445677788 89999988765 555533 3346777776664332 22333322 22333333 4799998998
Q ss_pred HHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh-CCCeEEEeecC
Q 002955 265 DYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF-KGQIVMLGVDD 343 (863)
Q Consensus 265 ~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~~~vil~Vdr 343 (863)
...+.|.+ +|+. .. +.++|++ +.+.+. .+........+++.+ +++++++++++
T Consensus 188 ~~~~~l~~-----~g~~---------------~~-i~vi~n~-~~d~~~----~~~~~~~~~~~r~~~~~~~~vil~~~~ 241 (425)
T PRK05749 188 EDAERFLA-----LGAK---------------NE-VTVTGNL-KFDIEV----PPELAARAATLRRQLAPNRPVWIAAST 241 (425)
T ss_pred HHHHHHHH-----cCCC---------------CC-cEecccc-cccCCC----ChhhHHHHHHHHHHhcCCCcEEEEeCC
Confidence 88877764 2321 11 2344542 222111 111122344566666 67888999987
Q ss_pred cccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhc---cCCCCcc----cEEEE
Q 002955 344 MDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKI---FGRPGYQ----PVVLI 416 (863)
Q Consensus 344 ld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~---~g~~~~~----pv~~~ 416 (863)
. .|+...+++||.++++++|+++ |+++| ++++. .+++.+++++.+-. +.. +.. ..+++
T Consensus 242 ~--~~~~~~ll~A~~~l~~~~~~~~----liivG-----~g~~r---~~~l~~~~~~~gl~~~~~~~-~~~~~~~~~v~l 306 (425)
T PRK05749 242 H--EGEEELVLDAHRALLKQFPNLL----LILVP-----RHPER---FKEVEELLKKAGLSYVRRSQ-GEPPSADTDVLL 306 (425)
T ss_pred C--chHHHHHHHHHHHHHHhCCCcE----EEEcC-----CChhh---HHHHHHHHHhCCCcEEEccC-CCCCCCCCcEEE
Confidence 5 5889999999999998899876 77766 34432 12333343333211 110 000 12333
Q ss_pred cCCCCHHHHHHHHHhccceee-cccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcc----cC-C
Q 002955 417 DTPLQFYERIAYYVIAECCLV-TAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSP----SL-S 490 (863)
Q Consensus 417 ~~~v~~~el~aly~~ADv~vv-tS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~----~l-~ 490 (863)
.+ +..|+..+|+.||++++ +|..||+|++++|||+| +.|+|++...|... .+ .
T Consensus 307 ~~--~~~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~-------------------G~PVI~g~~~~~~~e~~~~~~~ 365 (425)
T PRK05749 307 GD--TMGELGLLYAIADIAFVGGSLVKRGGHNPLEPAAF-------------------GVPVISGPHTFNFKEIFERLLQ 365 (425)
T ss_pred Ee--cHHHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHh-------------------CCCEEECCCccCHHHHHHHHHH
Confidence 32 36799999999999666 68889999999999999 56688776544332 22 3
Q ss_pred CceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHH
Q 002955 491 GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLE 546 (863)
Q Consensus 491 ~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 546 (863)
+|.++.|.|.+++|++|.++++.+ +.+....++.++++.++. .=.+..++.+.
T Consensus 366 ~g~~~~~~d~~~La~~l~~ll~~~-~~~~~m~~~a~~~~~~~~--~~~~~~~~~l~ 418 (425)
T PRK05749 366 AGAAIQVEDAEDLAKAVTYLLTDP-DARQAYGEAGVAFLKQNQ--GALQRTLQLLE 418 (425)
T ss_pred CCCeEEECCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHhCc--cHHHHHHHHHH
Confidence 577888999999999999999744 455556666777776652 23344444443
No 110
>PLN02275 transferase, transferring glycosyl groups
Probab=99.63 E-value=1.1e-14 Score=164.77 Aligned_cols=239 Identities=11% Similarity=0.013 Sum_probs=154.5
Q ss_pred cCCCCCEEEEeCcccch--HHHHHHhhCCCCeEEEEEeCCCCChhHhhc-C---CC----hHHHHHHH-HhCCEecccCH
Q 002955 196 ISPDDDFVWVHDYHLMV--LPTFLRKRFNRVKLGFFLHSPFPSSEIYRT-L---PI----RDELLRAL-LNADLIGFHTF 264 (863)
Q Consensus 196 ~~p~~D~VwvhDyhl~l--lp~~lr~~~~~~~i~~flH~PfP~~e~~r~-l---p~----r~eil~~l-l~~dligF~t~ 264 (863)
.+| |+|++|..+.+. ++..+-.+..++|+.+.+|..+.+ .+.. . +. ...+-+.+ -.+|.|-..+.
T Consensus 99 ~~~--DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~--~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~S~ 174 (371)
T PLN02275 99 PRP--DVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYT--LLALSLGRSHPLVRLYRWYERHYGKMADGHLCVTK 174 (371)
T ss_pred CCC--CEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHH--HHhcccCCCCHHHHHHHHHHHHHHhhCCEEEECCH
Confidence 455 899999877532 344443444468899999975421 1110 0 00 01111121 23677766666
Q ss_pred HHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCc
Q 002955 265 DYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDM 344 (863)
Q Consensus 265 ~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrl 344 (863)
...+...+. .|.. +.++|+|+ .+.|.+... . ..++ ...+.++++++|+
T Consensus 175 ~~~~~l~~~--------------------~g~~--i~vi~n~~-~~~f~~~~~---~----~~~~--~~~~~~i~~~grl 222 (371)
T PLN02275 175 AMQHELDQN--------------------WGIR--ATVLYDQP-PEFFRPASL---E----IRLR--PNRPALVVSSTSW 222 (371)
T ss_pred HHHHHHHHh--------------------cCCC--eEEECCCC-HHHcCcCCc---h----hccc--CCCcEEEEEeCce
Confidence 555443220 0111 56778884 455542210 0 0111 1235678899999
Q ss_pred ccccCHHHHHHHHHHHHH-----------------hCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCC
Q 002955 345 DIFKGISLKLLAMEQLLS-----------------QNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGR 407 (863)
Q Consensus 345 d~~KGi~~~l~A~~~ll~-----------------~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~ 407 (863)
.+.||+..+++|+..+.. ++|+ +.|+.+| +|++.+++++.+. +.
T Consensus 223 ~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~----i~l~ivG-----~G~~~~~l~~~~~----~~------ 283 (371)
T PLN02275 223 TPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPR----LLFIITG-----KGPQKAMYEEKIS----RL------ 283 (371)
T ss_pred eccCCHHHHHHHHHHHHhhhhhccccccccccccccCCC----eEEEEEe-----CCCCHHHHHHHHH----Hc------
Confidence 999999999999988752 3455 4488888 3454444544443 32
Q ss_pred CCcccEEEEcCCCCHHHHHHHHHhccceeecc---cccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEeccccc
Q 002955 408 PGYQPVVLIDTPLQFYERIAYYVIAECCLVTA---VRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVG 484 (863)
Q Consensus 408 ~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS---~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G 484 (863)
+...++++.+.++.+++..+|+.||+||+|+ ..|||+++.+||||| +.|+|+|...|
T Consensus 284 -~l~~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~-------------------G~PVVa~~~gg 343 (371)
T PLN02275 284 -NLRHVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGC-------------------GLPVCAVSYSC 343 (371)
T ss_pred -CCCceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHC-------------------CCCEEEecCCC
Confidence 2334777787899999999999999999853 348999999999999 56799999888
Q ss_pred CcccCC---CceEeCCCCHHHHHHHHHHHh
Q 002955 485 CSPSLS---GAIRVNPWNIDAVAEAMDSAL 511 (863)
Q Consensus 485 ~~~~l~---~al~VnP~d~~~~A~ai~~aL 511 (863)
..+.+. .|++|+ |++++|++|.++|
T Consensus 344 ~~eiv~~g~~G~lv~--~~~~la~~i~~l~ 371 (371)
T PLN02275 344 IGELVKDGKNGLLFS--SSSELADQLLELL 371 (371)
T ss_pred hHHHccCCCCeEEEC--CHHHHHHHHHHhC
Confidence 887772 488986 6999999998875
No 111
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.57 E-value=7.8e-15 Score=146.73 Aligned_cols=143 Identities=20% Similarity=0.337 Sum_probs=111.0
Q ss_pred CCCeEEEeecCcccccCHHHHHHHHHHHHHh-CCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcc
Q 002955 333 KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQ-NPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQ 411 (863)
Q Consensus 333 ~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~-~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~ 411 (863)
.++++|++++|+++.||+..+++|+..+.++ .|++. |+.+|. ++....++ .++...+ .. .
T Consensus 13 ~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~----l~i~G~-----~~~~~~~~----~~~~~~~----~~--~ 73 (172)
T PF00534_consen 13 DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYK----LVIVGD-----GEYKKELK----NLIEKLN----LK--E 73 (172)
T ss_dssp TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEE----EEEESH-----CCHHHHHH----HHHHHTT----CG--T
T ss_pred CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeE----EEEEcc-----cccccccc----ccccccc----cc--c
Confidence 6789999999999999999999999999875 66655 887772 22222333 3333322 11 1
Q ss_pred cEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC-
Q 002955 412 PVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS- 490 (863)
Q Consensus 412 pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~- 490 (863)
.|. +.+.++.+++.++|+.||++|.||..||+|++++|||+| +.|+|+|..+|..+.+.
T Consensus 74 ~i~-~~~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~-------------------g~pvI~~~~~~~~e~~~~ 133 (172)
T PF00534_consen 74 NII-FLGYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMAC-------------------GCPVIASDIGGNNEIIND 133 (172)
T ss_dssp TEE-EEESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHT-------------------T-EEEEESSTHHHHHSGT
T ss_pred ccc-ccccccccccccccccceecccccccccccccccccccc-------------------ccceeeccccCCceeecc
Confidence 244 445677999999999999999999999999999999999 67899999888877772
Q ss_pred --CceEeCCCCHHHHHHHHHHHhCCC
Q 002955 491 --GAIRVNPWNIDAVAEAMDSALGVS 514 (863)
Q Consensus 491 --~al~VnP~d~~~~A~ai~~aL~m~ 514 (863)
.|++++|.|+++++++|.+++.++
T Consensus 134 ~~~g~~~~~~~~~~l~~~i~~~l~~~ 159 (172)
T PF00534_consen 134 GVNGFLFDPNDIEELADAIEKLLNDP 159 (172)
T ss_dssp TTSEEEESTTSHHHHHHHHHHHHHHH
T ss_pred ccceEEeCCCCHHHHHHHHHHHHCCH
Confidence 368999999999999999999866
No 112
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.51 E-value=2e-13 Score=135.45 Aligned_cols=199 Identities=23% Similarity=0.258 Sum_probs=123.8
Q ss_pred ccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc--CCceEEccCcEEEEeCCc
Q 002955 591 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC--EGLGIAAEHGYFVRPNYG 668 (863)
Q Consensus 591 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l--~~l~liaenGa~I~~~~~ 668 (863)
+.++||+|+||||++++ .+..|.. ..+.+| ++.|..|++||..+..++..+-..+ +.+++|+|||+.|+.+.+
T Consensus 6 ~~~lIFtDlD~TLl~~~-ye~~pA~---pv~~el-~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~~p~iaEnG~aI~~p~~ 80 (274)
T COG3769 6 MPLLIFTDLDGTLLPHS-YEWQPAA---PVLLEL-KDAGVPVILCSSKTRAEMLYLQKSLGVQGLPLIAENGAAIYLPKG 80 (274)
T ss_pred cceEEEEcccCcccCCC-CCCCccc---hHHHHH-HHcCCeEEEeccchHHHHHHHHHhcCCCCCceeecCCceEEeccc
Confidence 46899999999999932 3444444 445555 6669999999999999998888776 568999999999987653
Q ss_pred eeEEeecC---------CCCc-cHHHHHHHHHHHHhhcCCCceeeec--cceeEeecccCCCCc-------------chh
Q 002955 669 VDWETCVS---------VPDF-SWKQIAEPVMKLYTETTDGSTIETK--ESALVWNFQYADPDF-------------GSC 723 (863)
Q Consensus 669 ~~w~~~~~---------~~~~-~w~~~v~~i~~~y~~~~~gs~ie~k--~~~l~~~y~~~d~~~-------------~~~ 723 (863)
|..... .... .-.+.+++.++...+...-.++.+- +....|. ...++. -.+
T Consensus 81 --~~~~~~~~r~~~g~~~~elg~~l~~ire~l~kLee~~g~~~~~~~d~~ei~e~T--Glpre~aaLa~~rEyseti~~r 156 (274)
T COG3769 81 --WFPFDGKPREISGISHIELGKVLEKIREKLDKLEEHFGFTTFDDVDDEEIAEWT--GLPREQAALAMLREYSETIIWR 156 (274)
T ss_pred --ccccCCCCceecceEeeehhhhHHHHHHHHHHHHHHhCeeEeccCCHHHHHHHh--CCChHHhHHHHHHHhhhheeec
Confidence 221100 0000 0112222222222221111111000 0000000 000000 001
Q ss_pred hHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhh
Q 002955 724 QAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 799 (863)
Q Consensus 724 ~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 799 (863)
...+...++...|...++.++.|..+.-|......||.|+.++++.+...+. ..-+++.||+.||.+||+.....
T Consensus 157 s~d~~~~~~~~~L~e~glt~v~garf~~v~~as~gKg~Aa~~ll~~y~rl~~-~r~t~~~GDg~nD~Pl~ev~d~A 231 (274)
T COG3769 157 SSDERMAQFTARLNERGLTFVHGARFWHVLDASAGKGQAANWLLETYRRLGG-ARTTLGLGDGPNDAPLLEVMDYA 231 (274)
T ss_pred ccchHHHHHHHHHHhcCceEEeccceEEEeccccCccHHHHHHHHHHHhcCc-eeEEEecCCCCCcccHHHhhhhh
Confidence 1123445566777777899999999999999999999999999997744432 23599999999999999999863
No 113
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.49 E-value=2e-12 Score=146.28 Aligned_cols=267 Identities=14% Similarity=0.121 Sum_probs=165.7
Q ss_pred cCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCC-hHHHHHHHHhCCEecccCHHHHHHHHHHH
Q 002955 196 ISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPI-RDELLRALLNADLIGFHTFDYARHFLSCC 274 (863)
Q Consensus 196 ~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~-r~eil~~ll~~dligF~t~~~~~~Fl~~~ 274 (863)
.+.++.++|.+.--...+... .+..++.+-+|--|+...... +. .......+-.||+|-..+....+++..
T Consensus 99 ~~~~~~i~~~~~P~~~~~~~~----~~~~~~Vyd~~D~~~~~~~~~--~~~~~~e~~~~~~ad~vi~~S~~l~~~~~~-- 170 (373)
T cd04950 99 LGFGRPILWYYTPYTLPVAAL----LQASLVVYDCVDDLSAFPGGP--PELLEAERRLLKRADLVFTTSPSLYEAKRR-- 170 (373)
T ss_pred cCCCCcEEEEeCccHHHHHhh----cCCCeEEEEcccchhccCCCC--HHHHHHHHHHHHhCCEEEECCHHHHHHHhh--
Confidence 344457888875444443333 456788888876665332110 11 111223345689887777655543221
Q ss_pred HhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCHHHHH
Q 002955 275 SRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKL 354 (863)
Q Consensus 275 ~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l 354 (863)
+ + .++.++|+|+|.+.|......+.. .+.+. ..++++|+++|+++..+++. +|
T Consensus 171 ------------------~-~--~~i~~i~ngvd~~~f~~~~~~~~~---~~~~~--~~~~~~i~y~G~l~~~~d~~-ll 223 (373)
T cd04950 171 ------------------L-N--PNVVLVPNGVDYEHFAAARDPPPP---PADLA--ALPRPVIGYYGAIAEWLDLE-LL 223 (373)
T ss_pred ------------------C-C--CCEEEcccccCHHHhhcccccCCC---hhHHh--cCCCCEEEEEeccccccCHH-HH
Confidence 1 1 246679999999999743221110 11111 14678999999999966654 33
Q ss_pred HHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccc
Q 002955 355 LAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAEC 434 (863)
Q Consensus 355 ~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv 434 (863)
. .+.+.+|+++ |+.||... .. .+. .+ + . .. +-+.+.|.++.+++.++|+.||+
T Consensus 224 ~---~la~~~p~~~----~vliG~~~---~~--~~~-~~---~----~------~~-~nV~~~G~~~~~~l~~~l~~~Dv 276 (373)
T cd04950 224 E---ALAKARPDWS----FVLIGPVD---VS--IDP-SA---L----L------RL-PNVHYLGPKPYKELPAYLAGFDV 276 (373)
T ss_pred H---HHHHHCCCCE----EEEECCCc---Cc--cCh-hH---h----c------cC-CCEEEeCCCCHHHHHHHHHhCCE
Confidence 3 3445678876 88888431 01 111 11 0 0 11 22455689999999999999999
Q ss_pred eeeccc-----ccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCCCceEeCCCCHHHHHHHHHH
Q 002955 435 CLVTAV-----RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDS 509 (863)
Q Consensus 435 ~vvtS~-----~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~~al~VnP~d~~~~A~ai~~ 509 (863)
+++|+. +.++++..+||||| |.|+|.|.+.++.+.. ++..+.+.|.++++++|.+
T Consensus 277 ~l~P~~~~~~~~~~~P~Kl~EylA~-------------------G~PVVat~~~~~~~~~-~~~~~~~~d~~~~~~ai~~ 336 (373)
T cd04950 277 AILPFRLNELTRATSPLKLFEYLAA-------------------GKPVVATPLPEVRRYE-DEVVLIADDPEEFVAAIEK 336 (373)
T ss_pred EecCCccchhhhcCCcchHHHHhcc-------------------CCCEEecCcHHHHhhc-CcEEEeCCCHHHHHHHHHH
Confidence 999985 45788999999999 4568888766554333 3444456799999999999
Q ss_pred HhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHH
Q 002955 510 ALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLER 547 (863)
Q Consensus 510 aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 547 (863)
+|..+..++..+. .+.+.+||+..=++.+++.|..
T Consensus 337 ~l~~~~~~~~~~~---~~~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 337 ALLEDGPARERRR---LRLAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred HHhcCCchHHHHH---HHHHHHCCHHHHHHHHHHHHHh
Confidence 8765543333222 2267789988888888765543
No 114
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=99.41 E-value=6.4e-13 Score=141.00 Aligned_cols=189 Identities=16% Similarity=0.161 Sum_probs=139.6
Q ss_pred HHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh-CCCeEEEeecCcccccCHH
Q 002955 273 CCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF-KGQIVMLGVDDMDIFKGIS 351 (863)
Q Consensus 273 ~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~~~vil~Vdrld~~KGi~ 351 (863)
...|.+.+++.++.+.+ +.-.-..-++.++|+-++...|.+.... +. .+...|+.++||-|.||++
T Consensus 145 ~id~~IcVshtskentv-lr~~L~p~kvsvIPnAv~~~~f~P~~~~------------~~S~~i~~ivv~sRLvyrKGiD 211 (426)
T KOG1111|consen 145 NIDRIICVSHTSKENTV-LRGALAPAKVSVIPNAVVTHTFTPDAAD------------KPSADIITIVVASRLVYRKGID 211 (426)
T ss_pred CCCcEEEEeecCCCceE-EEeccCHhHeeeccceeeccccccCccc------------cCCCCeeEEEEEeeeeeccchH
Confidence 34556677777776543 3333334578899999999999753221 22 4558899999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHh
Q 002955 352 LKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVI 431 (863)
Q Consensus 352 ~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ 431 (863)
+++..+.++-++||+.+ ++.+| +||....+++.+++. + -+.+| .+.|.++++++...|..
T Consensus 212 ll~~iIp~vc~~~p~vr----fii~G-----DGPk~i~lee~lEk~----~------l~~rV-~~lG~v~h~~Vr~vl~~ 271 (426)
T KOG1111|consen 212 LLLEIIPSVCDKHPEVR----FIIIG-----DGPKRIDLEEMLEKL----F------LQDRV-VMLGTVPHDRVRDVLVR 271 (426)
T ss_pred HHHHHHHHHHhcCCCee----EEEec-----CCcccchHHHHHHHh----h------ccCce-EEecccchHHHHHHHhc
Confidence 99999999999999988 88777 455433333333322 0 12344 45679999999999999
Q ss_pred ccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCCCc-eEeCCCCHHHHHHHHHHH
Q 002955 432 AECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSGA-IRVNPWNIDAVAEAMDSA 510 (863)
Q Consensus 432 ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~~a-l~VnP~d~~~~A~ai~~a 510 (863)
.|+|+.||+.|.|+++..||+.| |-++|.+..+|..+.|... +..-+-.++++++++.+|
T Consensus 272 G~IFlntSlTEafc~~ivEAaSc-------------------GL~VVsTrVGGIpeVLP~d~i~~~~~~~~dl~~~v~~a 332 (426)
T KOG1111|consen 272 GDIFLNTSLTEAFCMVIVEAASC-------------------GLPVVSTRVGGIPEVLPEDMITLGEPGPDDLVGAVEKA 332 (426)
T ss_pred CcEEeccHHHHHHHHHHHHHHhC-------------------CCEEEEeecCCccccCCccceeccCCChHHHHHHHHHH
Confidence 99999999999999999999999 3456777777777777544 434555788888888888
Q ss_pred hCC
Q 002955 511 LGV 513 (863)
Q Consensus 511 L~m 513 (863)
++.
T Consensus 333 i~~ 335 (426)
T KOG1111|consen 333 ITK 335 (426)
T ss_pred HHH
Confidence 864
No 115
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.35 E-value=1.1e-10 Score=132.71 Aligned_cols=191 Identities=14% Similarity=0.162 Sum_probs=122.2
Q ss_pred EEEEeccccCchHHHhhcCCchHHHHHHHHHHHh---CCCeEEEeecCcccccCHHHHHHHHHHHHHh----CCCCCCce
Q 002955 299 SIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQ----NPSKRGKI 371 (863)
Q Consensus 299 ~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~----~p~~~~~v 371 (863)
+|.+++++|+...+... + ...++++++ +++++|+.+||....||+...++++..++.. .|+.+
T Consensus 174 ki~v~g~~v~~~f~~~~---~----~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~--- 243 (382)
T PLN02605 174 QIRVYGLPIRPSFARAV---R----PKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQ--- 243 (382)
T ss_pred HEEEECcccCHhhccCC---C----CHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCce---
Confidence 44556788876433211 1 123456666 4678999999999999999999999876522 24332
Q ss_pred EEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceee
Q 002955 372 VLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEY 451 (863)
Q Consensus 372 vLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea 451 (863)
++.++. +++ ++++++.+... + ..| .+.|.++ ++..||++||++|.+| .++++.||
T Consensus 244 -~~vi~G----~~~---~~~~~L~~~~~------~----~~v-~~~G~~~--~~~~l~~aaDv~V~~~----g~~ti~EA 298 (382)
T PLN02605 244 -VVVICG----RNK---KLQSKLESRDW------K----IPV-KVRGFVT--NMEEWMGACDCIITKA----GPGTIAEA 298 (382)
T ss_pred -EEEEEC----CCH---HHHHHHHhhcc------c----CCe-EEEeccc--cHHHHHHhCCEEEECC----CcchHHHH
Confidence 333442 222 23333332210 0 123 3556664 7999999999999865 37899999
Q ss_pred eeeecCCcccccccCCCCCCCCCccEEecccc-----cCcccC-CCceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHH
Q 002955 452 IICRQGNEKLDMTLGLDPSTAKSSMLVVSEFV-----GCSPSL-SGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKH 525 (863)
Q Consensus 452 ~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~-----G~~~~l-~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~ 525 (863)
|+| +.|+|++... |.++.+ .++.-+.+.|+++++++|.++|...++.++.+.+..
T Consensus 299 ma~-------------------g~PvI~~~~~pgqe~gn~~~i~~~g~g~~~~~~~~la~~i~~ll~~~~~~~~~m~~~~ 359 (382)
T PLN02605 299 LIR-------------------GLPIILNGYIPGQEEGNVPYVVDNGFGAFSESPKEIARIVAEWFGDKSDELEAMSENA 359 (382)
T ss_pred HHc-------------------CCCEEEecCCCccchhhHHHHHhCCceeecCCHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 999 5668888752 333434 333334468999999999999987455555556666
Q ss_pred hhhhccCCHHHHHHHHHH
Q 002955 526 YRYVSTHDVAYWARSFLQ 543 (863)
Q Consensus 526 ~~~v~~~~~~~W~~~~l~ 543 (863)
+++...+....-++.+++
T Consensus 360 ~~~~~~~a~~~i~~~l~~ 377 (382)
T PLN02605 360 LKLARPEAVFDIVHDLHE 377 (382)
T ss_pred HHhcCCchHHHHHHHHHH
Confidence 777766766666655543
No 116
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.20 E-value=2.7e-10 Score=117.46 Aligned_cols=111 Identities=16% Similarity=0.205 Sum_probs=80.9
Q ss_pred eecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCC
Q 002955 340 GVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTP 419 (863)
Q Consensus 340 ~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~ 419 (863)
++||+.+.||+...++|+..+.+++|+++ ++.+|... ..+ ..+..+. +.+ ....|.++ +.
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~----~~i~G~~~---~~~--~~~~~~~--------~~~--~~~~v~~~-~~ 168 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLK----LVIAGDGP---ERE--YLEELLA--------ALL--LLDRVIFL-GG 168 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeE----EEEEeCCC---ChH--HHHHHHH--------hcC--CcccEEEe-CC
Confidence 89999999999999999999998888765 88888432 111 1111111 111 11234444 45
Q ss_pred C-CHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC
Q 002955 420 L-QFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL 489 (863)
Q Consensus 420 v-~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l 489 (863)
+ +.+++..+++.||+++.||..||++.+.+|||+| +.|+|+|+..|..+.+
T Consensus 169 ~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~-------------------g~pvi~s~~~~~~e~i 220 (229)
T cd01635 169 LDPEELLALLLAAADVFVLPSLREGFGLVVLEAMAC-------------------GLPVIATDVGGPPEIV 220 (229)
T ss_pred CCcHHHHHHHhhcCCEEEecccccCcChHHHHHHhC-------------------CCCEEEcCCCCcceEE
Confidence 5 5566667777799999999999999999999999 5679999998877654
No 117
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.16 E-value=8.7e-10 Score=124.70 Aligned_cols=186 Identities=12% Similarity=0.107 Sum_probs=138.8
Q ss_pred CeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCC-ceEEEEEecC-CCCCchhHHHHHHHHHHHHHHHhhccCCCCccc
Q 002955 335 QIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRG-KIVLVQIANP-ARGRGRDVQEVQSETHATVRRINKIFGRPGYQP 412 (863)
Q Consensus 335 ~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~-~vvLvqi~~p-~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~p 412 (863)
..+...+.|+.+-||+...|.||.++...-|+..- ...++..+++ ..+...+..++..++.+++++.+- +..
T Consensus 273 d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l------~g~ 346 (495)
T KOG0853|consen 273 DRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDL------LGQ 346 (495)
T ss_pred ceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCc------cCc
Confidence 67889999999999999999999999887765211 2334444433 333344445566677777766521 123
Q ss_pred EEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC---
Q 002955 413 VVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL--- 489 (863)
Q Consensus 413 v~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l--- 489 (863)
.+++..+.++.+.+.++..+.+..+++..|.||+|++|||+| +-|+|++..+|..+.+
T Consensus 347 ~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~-------------------glPvvAt~~GGP~EiV~~~ 407 (495)
T KOG0853|consen 347 FVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMAC-------------------GLPVVATNNGGPAEIVVHG 407 (495)
T ss_pred eEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhc-------------------CCCEEEecCCCceEEEEcC
Confidence 567767888888888888888888999899999999999999 5679999999999998
Q ss_pred CCceEeCCCCHH---HHHHHHHHHhCCCHHHHHHHHHHHhhhhcc-CCHHHHHHHHHHHHHHHHHh
Q 002955 490 SGAIRVNPWNID---AVAEAMDSALGVSDAEKQMRHEKHYRYVST-HDVAYWARSFLQDLERACRD 551 (863)
Q Consensus 490 ~~al~VnP~d~~---~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~~l~~l~~~~~~ 551 (863)
..|++++| +.+ .+|++|.++.+.|.. +....++.++.|.+ +++ +.|.+.+.....+
T Consensus 408 ~tG~l~dp-~~e~~~~~a~~~~kl~~~p~l-~~~~~~~G~~rV~e~fs~----~~~~~ri~~~~~~ 467 (495)
T KOG0853|consen 408 VTGLLIDP-GQEAVAELADALLKLRRDPEL-WARMGKNGLKRVKEMFSW----QHYSERIASVLGK 467 (495)
T ss_pred CcceeeCC-chHHHHHHHHHHHHHhcCHHH-HHHHHHHHHHHHHHHHhH----HHHHHHHHHHhHh
Confidence 35999999 666 599999999987655 66666778888877 554 5566655554443
No 118
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.16 E-value=7.2e-10 Score=120.14 Aligned_cols=197 Identities=18% Similarity=0.255 Sum_probs=139.6
Q ss_pred EEEEeccccCchHHHhhcCCchHHHHHHHHHHH-hCC--CeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEE
Q 002955 299 SIKILPVGIHIGQLQSVLNLPETEAKVAELQDQ-FKG--QIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQ 375 (863)
Q Consensus 299 ~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~-~~~--~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvq 375 (863)
.+.+.|.|++...+... +.. ... +.++++++|+++.||+...++|+..+.+..++ +.++.
T Consensus 173 ~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~----~~~~~ 235 (381)
T COG0438 173 KIVVIPNGIDTEKFAPA-------------RIGLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPD----IKLVI 235 (381)
T ss_pred CceEecCCcCHHHcCcc-------------ccCCCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCC----eEEEE
Confidence 56678999999887631 000 112 36899999999999999999999999887776 34776
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeee
Q 002955 376 IANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICR 455 (863)
Q Consensus 376 i~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~ 455 (863)
+|..... ...+..++...+. .+.+.+.+.++.+++..+|+.||+++.||..||||++.+|||+|
T Consensus 236 ~g~~~~~--------~~~~~~~~~~~~~-------~~~v~~~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~- 299 (381)
T COG0438 236 VGDGPER--------REELEKLAKKLGL-------EDNVKFLGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAA- 299 (381)
T ss_pred EcCCCcc--------HHHHHHHHHHhCC-------CCcEEEecccCHHHHHHHHHhCCEEEeccccccchHHHHHHHhc-
Confidence 6643211 1222223333321 23344577888889999999999999999999999999999998
Q ss_pred cCCcccccccCCCCCCCCCccEEecccccCcccCCC---ceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhh-cc
Q 002955 456 QGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSG---AIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYV-ST 531 (863)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~~---al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~ 531 (863)
+.|+|+|...|..+.+.. |+++++.|.+++++++..+++++ +.++...+..++.+ ..
T Consensus 300 ------------------g~pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~ 360 (381)
T COG0438 300 ------------------GTPVIASDVGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDP-ELREELGEAARERVEEE 360 (381)
T ss_pred ------------------CCcEEECCCCChHHHhcCCCceEecCCCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHh
Confidence 467899999988888843 77888888999999999999877 33333332233333 46
Q ss_pred CCHHHHHHHHHHHHHH
Q 002955 532 HDVAYWARSFLQDLER 547 (863)
Q Consensus 532 ~~~~~W~~~~l~~l~~ 547 (863)
+++..-++.+..-+..
T Consensus 361 ~~~~~~~~~~~~~~~~ 376 (381)
T COG0438 361 FSWERIAEQLLELYEE 376 (381)
T ss_pred cCHHHHHHHHHHHHHH
Confidence 7766666555554444
No 119
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.11 E-value=3.1e-09 Score=119.40 Aligned_cols=257 Identities=16% Similarity=0.064 Sum_probs=154.7
Q ss_pred HHHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHHH
Q 002955 191 KVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHF 270 (863)
Q Consensus 191 ~i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~F 270 (863)
++++..+| |+|..|.....+. ..+..+..+.|+.++.|..+|.. -..++- -.+|.+-..+.+- +
T Consensus 85 ~~ik~~~p--Dvv~~~~~~~~~~-~~~~~~~~~~p~v~~~~~~~~~~--------~~r~~~--~~~d~ii~~~~~~---~ 148 (357)
T PRK00726 85 KILKRFKP--DVVVGFGGYVSGP-GGLAARLLGIPLVIHEQNAVPGL--------ANKLLA--RFAKKVATAFPGA---F 148 (357)
T ss_pred HHHHhcCC--CEEEECCCcchhH-HHHHHHHcCCCEEEEcCCCCccH--------HHHHHH--HHhchheECchhh---h
Confidence 44555666 9999998655443 33445556788888777555431 011111 1244443222210 0
Q ss_pred HHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccccCH
Q 002955 271 LSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGI 350 (863)
Q Consensus 271 l~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi 350 (863)
.. ....++.++|+|++.+.+.. +.. ..++ ..-.+.++|+.+++....|++
T Consensus 149 --------------------~~--~~~~~i~vi~n~v~~~~~~~----~~~---~~~~-~~~~~~~~i~~~gg~~~~~~~ 198 (357)
T PRK00726 149 --------------------PE--FFKPKAVVTGNPVREEILAL----AAP---PARL-AGREGKPTLLVVGGSQGARVL 198 (357)
T ss_pred --------------------hc--cCCCCEEEECCCCChHhhcc----cch---hhhc-cCCCCCeEEEEECCcHhHHHH
Confidence 00 12245778999999876542 111 0111 111467888999999999998
Q ss_pred HHHH-HHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHH
Q 002955 351 SLKL-LAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYY 429 (863)
Q Consensus 351 ~~~l-~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly 429 (863)
..++ +|+.++.+. | .+++++|. ++. +++.+.+ + .+ .. | .+.+.+ ++...+|
T Consensus 199 ~~~l~~a~~~~~~~-~-----~~~~~~G~-----g~~-~~~~~~~----~-----~~---~~-v-~~~g~~--~~~~~~~ 250 (357)
T PRK00726 199 NEAVPEALALLPEA-L-----QVIHQTGK-----GDL-EEVRAAY----A-----AG---IN-A-EVVPFI--DDMAAAY 250 (357)
T ss_pred HHHHHHHHHHhhhC-c-----EEEEEcCC-----CcH-HHHHHHh----h-----cC---Cc-E-EEeehH--hhHHHHH
Confidence 7776 888777432 2 33566663 221 2332221 1 11 12 3 344554 6899999
Q ss_pred HhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccC--------cccC---CCceEeCCC
Q 002955 430 VIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGC--------SPSL---SGAIRVNPW 498 (863)
Q Consensus 430 ~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~--------~~~l---~~al~VnP~ 498 (863)
..||+++.+| | +.+.+|||+|+ .|+|++-..|. ++.+ ..|+++.|.
T Consensus 251 ~~~d~~i~~~---g-~~~~~Ea~~~g-------------------~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~ 307 (357)
T PRK00726 251 AAADLVICRA---G-ASTVAELAAAG-------------------LPAILVPLPHAADDHQTANARALVDAGAALLIPQS 307 (357)
T ss_pred HhCCEEEECC---C-HHHHHHHHHhC-------------------CCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcc
Confidence 9999999877 3 57899999994 45666544321 2233 237888888
Q ss_pred C--HHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHH
Q 002955 499 N--IDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDL 545 (863)
Q Consensus 499 d--~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 545 (863)
| +++++++|.++++. ++.++...+..+++....+...-++.+++.+
T Consensus 308 ~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (357)
T PRK00726 308 DLTPEKLAEKLLELLSD-PERLEAMAEAARALGKPDAAERLADLIEELA 355 (357)
T ss_pred cCCHHHHHHHHHHHHcC-HHHHHHHHHHHHhcCCcCHHHHHHHHHHHHh
Confidence 8 99999999999986 4445555555677777787777777776654
No 120
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.11 E-value=1.1e-08 Score=115.98 Aligned_cols=274 Identities=9% Similarity=0.072 Sum_probs=157.4
Q ss_pred HHHHHHHHHHHHHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEec
Q 002955 181 YVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIG 260 (863)
Q Consensus 181 Y~~vN~~fa~~i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dlig 260 (863)
+...+..-..++++..+| |+|.+| +....++.+.+....++|+....+-..+... .+.+ .+|.+-
T Consensus 88 ~~~~~~~~l~~~l~~~~p--D~Vi~~-~~~~~~~~~~~~~~~~ip~~~~~td~~~~~~---------~~~~---~ad~i~ 152 (380)
T PRK13609 88 YANFGRKRLKLLLQAEKP--DIVINT-FPIIAVPELKKQTGISIPTYNVLTDFCLHKI---------WVHR---EVDRYF 152 (380)
T ss_pred HHHHHHHHHHHHHHHhCc--CEEEEc-ChHHHHHHHHHhcCCCCCeEEEeCCCCCCcc---------cccC---CCCEEE
Confidence 333444445666777788 899885 6667788776666556676533321111110 0111 488887
Q ss_pred ccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCch-HHHhhcCCchHHHHHHHHHHHh---CCCe
Q 002955 261 FHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIG-QLQSVLNLPETEAKVAELQDQF---KGQI 336 (863)
Q Consensus 261 F~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~-~~~~~~~~~~~~~~~~~l~~~~---~~~~ 336 (863)
..+....+.+.+ .|+. ..++.++ |++.. .|... .. ...+++++ ++++
T Consensus 153 ~~s~~~~~~l~~-----~gi~---------------~~ki~v~--G~p~~~~f~~~---~~----~~~~~~~~~l~~~~~ 203 (380)
T PRK13609 153 VATDHVKKVLVD-----IGVP---------------PEQVVET--GIPIRSSFELK---IN----PDIIYNKYQLCPNKK 203 (380)
T ss_pred ECCHHHHHHHHH-----cCCC---------------hhHEEEE--CcccChHHcCc---CC----HHHHHHHcCCCCCCc
Confidence 776654444332 1321 1122222 33332 23211 11 12244554 2444
Q ss_pred -EEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEE
Q 002955 337 -VMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVL 415 (863)
Q Consensus 337 -vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~ 415 (863)
+++..|++...||+...++++. +.|+++ ++.++.. ++ .+++++++++++.+ ..|++
T Consensus 204 ~il~~~G~~~~~k~~~~li~~l~----~~~~~~----~viv~G~---~~----~~~~~l~~~~~~~~--------~~v~~ 260 (380)
T PRK13609 204 ILLIMAGAHGVLGNVKELCQSLM----SVPDLQ----VVVVCGK---NE----ALKQSLEDLQETNP--------DALKV 260 (380)
T ss_pred EEEEEcCCCCCCcCHHHHHHHHh----hCCCcE----EEEEeCC---CH----HHHHHHHHHHhcCC--------CcEEE
Confidence 5666789999999998888764 235554 7666531 11 23344444433221 23444
Q ss_pred EcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecc-cccCc----ccC-
Q 002955 416 IDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSE-FVGCS----PSL- 489 (863)
Q Consensus 416 ~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe-~~G~~----~~l- 489 (863)
+ |.+ +++..+|+.||++|. ++.|++++|||+| +.|+|++. ..|.. ..+
T Consensus 261 ~-g~~--~~~~~l~~~aD~~v~----~~gg~t~~EA~a~-------------------g~PvI~~~~~~g~~~~n~~~~~ 314 (380)
T PRK13609 261 F-GYV--ENIDELFRVTSCMIT----KPGGITLSEAAAL-------------------GVPVILYKPVPGQEKENAMYFE 314 (380)
T ss_pred E-ech--hhHHHHHHhccEEEe----CCCchHHHHHHHh-------------------CCCEEECCCCCCcchHHHHHHH
Confidence 4 555 468899999999873 4558999999999 45677765 33321 112
Q ss_pred CCceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHH
Q 002955 490 SGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLERA 548 (863)
Q Consensus 490 ~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 548 (863)
..|..+.+.|.++++++|.++++.+ +.+....++.+++...++....++.+++.+...
T Consensus 315 ~~G~~~~~~~~~~l~~~i~~ll~~~-~~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~ 372 (380)
T PRK13609 315 RKGAAVVIRDDEEVFAKTEALLQDD-MKLLQMKEAMKSLYLPEPADHIVDDILAENHVE 372 (380)
T ss_pred hCCcEEEECCHHHHHHHHHHHHCCH-HHHHHHHHHHHHhCCCchHHHHHHHHHHhhhhh
Confidence 2344455689999999999999854 334444445566666788888888887766543
No 121
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.09 E-value=3.6e-09 Score=118.24 Aligned_cols=249 Identities=15% Similarity=0.128 Sum_probs=145.0
Q ss_pred HHHHHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHH
Q 002955 189 ADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYAR 268 (863)
Q Consensus 189 a~~i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~ 268 (863)
+.++++..+| |+|+.|.... .++..+..+..++|+.++-|..||.. . ..++ ...+|.|...+....+
T Consensus 81 ~~~~i~~~~p--DvI~~~~~~~-~~~~~~~a~~~~~p~v~~~~~~~~~~--~------~~~~--~~~~~~vi~~s~~~~~ 147 (350)
T cd03785 81 ARKILKKFKP--DVVVGFGGYV-SGPVGLAAKLLGIPLVIHEQNAVPGL--A------NRLL--ARFADRVALSFPETAK 147 (350)
T ss_pred HHHHHHhcCC--CEEEECCCCc-chHHHHHHHHhCCCEEEEcCCCCccH--H------HHHH--HHhhCEEEEcchhhhh
Confidence 3355566677 8999986554 34444545555678876666555421 0 1111 1125666554443221
Q ss_pred HHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh---CCCeEEEeecCcc
Q 002955 269 HFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMD 345 (863)
Q Consensus 269 ~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld 345 (863)
. + ...++.++|+|+|.+.+... + . ++++ +++++++.+++..
T Consensus 148 ~-----------------------~--~~~~~~~i~n~v~~~~~~~~---~----~----~~~~~~~~~~~~i~~~~g~~ 191 (350)
T cd03785 148 Y-----------------------F--PKDKAVVTGNPVREEILALD---R----E----RARLGLRPGKPTLLVFGGSQ 191 (350)
T ss_pred c-----------------------C--CCCcEEEECCCCchHHhhhh---h----h----HHhcCCCCCCeEEEEECCcH
Confidence 1 0 11355678999998766421 1 0 2332 4677888888887
Q ss_pred cccCHHHHH-HHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHH
Q 002955 346 IFKGISLKL-LAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYE 424 (863)
Q Consensus 346 ~~KGi~~~l-~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~e 424 (863)
..|+...++ .|+..+. + ++ +.++.++. .+ +.+++++.+.++ + ..| .+.+.+ ++
T Consensus 192 ~~~~~~~~l~~a~~~l~-~-~~----~~~~~i~G----~g-~~~~l~~~~~~~--------~----~~v-~~~g~~--~~ 245 (350)
T cd03785 192 GARAINEAVPEALAELL-R-KR----LQVIHQTG----KG-DLEEVKKAYEEL--------G----VNY-EVFPFI--DD 245 (350)
T ss_pred hHHHHHHHHHHHHHHhh-c-cC----eEEEEEcC----Cc-cHHHHHHHHhcc--------C----CCe-EEeehh--hh
Confidence 888877654 7776664 2 22 33333331 22 223444333221 1 113 344444 78
Q ss_pred HHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEeccccc--------CcccC---CCce
Q 002955 425 RIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVG--------CSPSL---SGAI 493 (863)
Q Consensus 425 l~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G--------~~~~l---~~al 493 (863)
+..+|+.||++|.+| | +.+++|||+|+ .|+|++...| .++.+ ..|+
T Consensus 246 ~~~~l~~ad~~v~~s---g-~~t~~Eam~~G-------------------~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~ 302 (350)
T cd03785 246 MAAAYAAADLVISRA---G-ASTVAELAALG-------------------LPAILIPLPYAADDHQTANARALVKAGAAV 302 (350)
T ss_pred HHHHHHhcCEEEECC---C-HhHHHHHHHhC-------------------CCEEEeecCCCCCCcHHHhHHHHHhCCCEE
Confidence 999999999999876 3 57899999993 4566665433 12333 2378
Q ss_pred EeCCC--CHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHH
Q 002955 494 RVNPW--NIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAY 536 (863)
Q Consensus 494 ~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~ 536 (863)
+++|. |.++++++|.+++.. ++.++...++.++++..+...+
T Consensus 303 ~v~~~~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~~~~~~~~~~~ 346 (350)
T cd03785 303 LIPQEELTPERLAAALLELLSD-PERLKAMAEAARSLARPDAAER 346 (350)
T ss_pred EEecCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHhcCCCCHHHH
Confidence 99887 899999999999964 4444544555666665554433
No 122
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=99.07 E-value=6.1e-09 Score=117.51 Aligned_cols=252 Identities=15% Similarity=0.155 Sum_probs=144.9
Q ss_pred HHHHHHHHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHH--hCCEecccC
Q 002955 186 KIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALL--NADLIGFHT 263 (863)
Q Consensus 186 ~~fa~~i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll--~~dligF~t 263 (863)
..|++. ++..+| |+|.+|......+...+-.+.-++|++..-+ -.-+.+.+. |+.+++.+-+. -||++--.+
T Consensus 76 ~~l~~~-l~~~~p--Div~~~gd~~~~la~a~aa~~~~ipv~h~~~-g~~s~~~~~--~~~~~~~r~~~~~~ad~~~~~s 149 (365)
T TIGR00236 76 EGLEEL-LLEEKP--DIVLVQGDTTTTLAGALAAFYLQIPVGHVEA-GLRTGDRYS--PMPEEINRQLTGHIADLHFAPT 149 (365)
T ss_pred HHHHHH-HHHcCC--CEEEEeCCchHHHHHHHHHHHhCCCEEEEeC-CCCcCCCCC--CCccHHHHHHHHHHHHhccCCC
Confidence 445543 345567 9999996545444444433444678864322 111111111 22233323222 267776677
Q ss_pred HHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhC-C-CeEEEee
Q 002955 264 FDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFK-G-QIVMLGV 341 (863)
Q Consensus 264 ~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~-~-~~vil~V 341 (863)
....+++++ +|+ ...+|.++++|+....+..... .....+++++. + ..+++..
T Consensus 150 ~~~~~~l~~-----~G~---------------~~~~I~vign~~~d~~~~~~~~-----~~~~~~~~~~~~~~~~vl~~~ 204 (365)
T TIGR00236 150 EQAKDNLLR-----ENV---------------KADSIFVTGNTVIDALLTNVEI-----AYSSPVLSEFGEDKRYILLTL 204 (365)
T ss_pred HHHHHHHHH-----cCC---------------CcccEEEeCChHHHHHHHHHhh-----ccchhHHHhcCCCCCEEEEec
Confidence 777766654 132 1235677888863222221100 01233444552 2 3344445
Q ss_pred cCcc-cccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCC
Q 002955 342 DDMD-IFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPL 420 (863)
Q Consensus 342 drld-~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v 420 (863)
.|.. ..||+..+++|+.++.+++|+++ ++.++.|. ++ .+.+ +.+.. +. ...| .+.+.+
T Consensus 205 hr~~~~~k~~~~ll~a~~~l~~~~~~~~----~vi~~~~~----~~---~~~~---~~~~~----~~--~~~v-~~~~~~ 263 (365)
T TIGR00236 205 HRRENVGEPLENIFKAIREIVEEFEDVQ----IVYPVHLN----PV---VREP---LHKHL----GD--SKRV-HLIEPL 263 (365)
T ss_pred CchhhhhhHHHHHHHHHHHHHHHCCCCE----EEEECCCC----hH---HHHH---HHHHh----CC--CCCE-EEECCC
Confidence 4643 45999999999999998888775 66554332 11 1221 22222 11 1234 455688
Q ss_pred CHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEec-ccccCcccC-CC-ceEeCC
Q 002955 421 QFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVS-EFVGCSPSL-SG-AIRVNP 497 (863)
Q Consensus 421 ~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlS-e~~G~~~~l-~~-al~VnP 497 (863)
+..++..+|+.||+++.+| |.+..|||+| +.|+|++ ..+|..+.+ .+ ++++ |
T Consensus 264 ~~~~~~~~l~~ad~vv~~S-----g~~~~EA~a~-------------------g~PvI~~~~~~~~~e~~~~g~~~lv-~ 318 (365)
T TIGR00236 264 EYLDFLNLAANSHLILTDS-----GGVQEEAPSL-------------------GKPVLVLRDTTERPETVEAGTNKLV-G 318 (365)
T ss_pred ChHHHHHHHHhCCEEEECC-----hhHHHHHHHc-------------------CCCEEECCCCCCChHHHhcCceEEe-C
Confidence 9999999999999999888 4457999999 4557775 445544444 23 4566 6
Q ss_pred CCHHHHHHHHHHHhCCC
Q 002955 498 WNIDAVAEAMDSALGVS 514 (863)
Q Consensus 498 ~d~~~~A~ai~~aL~m~ 514 (863)
.|+++++++|.++++.+
T Consensus 319 ~d~~~i~~ai~~ll~~~ 335 (365)
T TIGR00236 319 TDKENITKAAKRLLTDP 335 (365)
T ss_pred CCHHHHHHHHHHHHhCh
Confidence 89999999999999754
No 123
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=99.02 E-value=2.5e-08 Score=112.03 Aligned_cols=252 Identities=15% Similarity=0.100 Sum_probs=142.6
Q ss_pred HHHHHHHHHHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeC--CCCChhHhhcCCCh--HHHHHHHHhCCEe
Q 002955 184 VNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHS--PFPSSEIYRTLPIR--DELLRALLNADLI 259 (863)
Q Consensus 184 vN~~fa~~i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~--PfP~~e~~r~lp~r--~eil~~ll~~dli 259 (863)
....+.+.+.+. +| |+|++|++....++..+..+..++|+....|- .|- +..|+. ...+.. .+|.+
T Consensus 76 ~~~~l~~~l~~~-~p--DvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s~~-----~~~~~~~~r~~~~~--~ad~~ 145 (363)
T cd03786 76 LLIGLEAVLLEE-KP--DLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRSFD-----RGMPDEENRHAIDK--LSDLH 145 (363)
T ss_pred HHHHHHHHHHHh-CC--CEEEEeCCchHHHHHHHHHHHcCCCEEEEecccccCC-----CCCCchHHHHHHHH--Hhhhc
Confidence 344444545444 77 99999988777676666555557888765441 120 001111 111111 35655
Q ss_pred cccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEecccc-CchHHHhhcCCchHHHHHHHHHHHh---CCC
Q 002955 260 GFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGI-HIGQLQSVLNLPETEAKVAELQDQF---KGQ 335 (863)
Q Consensus 260 gF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GI-d~~~~~~~~~~~~~~~~~~~l~~~~---~~~ 335 (863)
-.-+....+++.+ .|+ ...+|.++|+++ |...+..... . ....++.+ .++
T Consensus 146 ~~~s~~~~~~l~~-----~G~---------------~~~kI~vign~v~d~~~~~~~~~-~-----~~~~~~~~~~~~~~ 199 (363)
T cd03786 146 FAPTEEARRNLLQ-----EGE---------------PPERIFVVGNTMIDALLRLLELA-K-----KELILELLGLLPKK 199 (363)
T ss_pred cCCCHHHHHHHHH-----cCC---------------CcccEEEECchHHHHHHHHHHhh-c-----cchhhhhcccCCCC
Confidence 5445544444332 122 223455667764 5433321110 0 01111222 345
Q ss_pred eEEEeecCccc---ccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCccc
Q 002955 336 IVMLGVDDMDI---FKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQP 412 (863)
Q Consensus 336 ~vil~Vdrld~---~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~p 412 (863)
.+++.++|+.. .||+..+++|++++.++ + +.++..+.+ +....+++ .+.+.+. . .+
T Consensus 200 ~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~--~----~~vi~~~~~-----~~~~~l~~----~~~~~~~-----~-~~ 258 (363)
T cd03786 200 YILVTLHRVENVDDGEQLEEILEALAELAEE--D----VPVVFPNHP-----RTRPRIRE----AGLEFLG-----H-HP 258 (363)
T ss_pred EEEEEeCCccccCChHHHHHHHHHHHHHHhc--C----CEEEEECCC-----ChHHHHHH----HHHhhcc-----C-CC
Confidence 67778999875 79999999999887543 2 335544322 22223333 3333321 0 11
Q ss_pred EEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC-CC
Q 002955 413 VVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-SG 491 (863)
Q Consensus 413 v~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l-~~ 491 (863)
.+.+.+.....++..+|+.||++|.+|- | +..|+++| +.|+|++...+..+.+ ..
T Consensus 259 ~v~~~~~~~~~~~~~l~~~ad~~v~~Sg----g-i~~Ea~~~-------------------g~PvI~~~~~~~~~~~~~~ 314 (363)
T cd03786 259 NVLLISPLGYLYFLLLLKNADLVLTDSG----G-IQEEASFL-------------------GVPVLNLRDRTERPETVES 314 (363)
T ss_pred CEEEECCcCHHHHHHHHHcCcEEEEcCc----c-HHhhhhhc-------------------CCCEEeeCCCCccchhhhe
Confidence 2345556678899999999999999984 4 46899998 4557777655645444 44
Q ss_pred ceEeCC-CCHHHHHHHHHHHhCCCHH
Q 002955 492 AIRVNP-WNIDAVAEAMDSALGVSDA 516 (863)
Q Consensus 492 al~VnP-~d~~~~A~ai~~aL~m~~~ 516 (863)
|+.+.+ .|.++++++|.++++.+..
T Consensus 315 g~~~~~~~~~~~i~~~i~~ll~~~~~ 340 (363)
T cd03786 315 GTNVLVGTDPEAILAAIEKLLSDEFA 340 (363)
T ss_pred eeEEecCCCHHHHHHHHHHHhcCchh
Confidence 444433 3799999999999986533
No 124
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=98.97 E-value=1.6e-08 Score=112.86 Aligned_cols=180 Identities=12% Similarity=0.082 Sum_probs=112.8
Q ss_pred EEeccccCchHHHhhcCCchHHHHHHHHHHHh-CCCeEEEeecCcccccCHHHH-HHHHHHHHHhCCCCCCceEEEEEec
Q 002955 301 KILPVGIHIGQLQSVLNLPETEAKVAELQDQF-KGQIVMLGVDDMDIFKGISLK-LLAMEQLLSQNPSKRGKIVLVQIAN 378 (863)
Q Consensus 301 ~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~~~vil~Vdrld~~KGi~~~-l~A~~~ll~~~p~~~~~vvLvqi~~ 378 (863)
.++|+|++...+... + . ..++ .+ +++++|++++|....|++... +.|++++.+. +++ ++.++.
T Consensus 153 ~~i~n~v~~~~~~~~---~-~---~~~~--~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~~----~~~~~g 217 (348)
T TIGR01133 153 VLVGNPVRQEIRSLP---V-P---RERF--GLREGKPTILVLGGSQGAKILNELVPKALAKLAEK--GIQ----IVHQTG 217 (348)
T ss_pred eEEcCCcCHHHhccc---c-h---hhhc--CCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--CcE----EEEECC
Confidence 578999987655321 0 0 1111 11 467789999998888987664 4788777542 232 333432
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCC
Q 002955 379 PARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGN 458 (863)
Q Consensus 379 p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~ 458 (863)
+++. ++++ +.+.+. +...++.+. .. ++..+|+.||++|.+| | +.+.+|||+|
T Consensus 218 ----~~~~-~~l~----~~~~~~-------~l~~~v~~~---~~-~~~~~l~~ad~~v~~~---g-~~~l~Ea~~~---- 269 (348)
T TIGR01133 218 ----KNDL-EKVK----NVYQEL-------GIEAIVTFI---DE-NMAAAYAAADLVISRA---G-ASTVAELAAA---- 269 (348)
T ss_pred ----cchH-HHHH----HHHhhC-------CceEEecCc---cc-CHHHHHHhCCEEEECC---C-hhHHHHHHHc----
Confidence 2221 2333 333222 122233333 22 7899999999999865 4 6899999999
Q ss_pred cccccccCCCCCCCCCccEEecccccCc-------ccC---CCceEeCCCC--HHHHHHHHHHHhCCCHHHHHHHHHHHh
Q 002955 459 EKLDMTLGLDPSTAKSSMLVVSEFVGCS-------PSL---SGAIRVNPWN--IDAVAEAMDSALGVSDAEKQMRHEKHY 526 (863)
Q Consensus 459 ~~~~~~~~~~~~~~~~g~lVlSe~~G~~-------~~l---~~al~VnP~d--~~~~A~ai~~aL~m~~~er~~r~~~~~ 526 (863)
+.|+|++.+.|.. +.+ ..|++++|.| +++++++|.++++. ++.++...+..+
T Consensus 270 ---------------g~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~ 333 (348)
T TIGR01133 270 ---------------GVPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLD-PANLEAMAEAAR 333 (348)
T ss_pred ---------------CCCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcC-HHHHHHHHHHHH
Confidence 4567777665432 233 3488898876 99999999999964 445555566677
Q ss_pred hhhccCCHHHHHH
Q 002955 527 RYVSTHDVAYWAR 539 (863)
Q Consensus 527 ~~v~~~~~~~W~~ 539 (863)
+++..+...++++
T Consensus 334 ~~~~~~~~~~i~~ 346 (348)
T TIGR01133 334 KLAKPDAAKRIAE 346 (348)
T ss_pred hcCCccHHHHHHh
Confidence 7777776666554
No 125
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.96 E-value=1.5e-09 Score=107.18 Aligned_cols=72 Identities=24% Similarity=0.213 Sum_probs=57.1
Q ss_pred CHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCC--CccccceecCCH--hH-
Q 002955 758 NKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ--KPSKAKYYLDDT--AE- 832 (863)
Q Consensus 758 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~--~~s~A~y~l~d~--~e- 832 (863)
+|..+++.+++++ |++++.+++|||+.||++|++.+|.++ ++..+. .+..|+|++.++ ++
T Consensus 76 ~k~~~~~~~~~~~---~~~~~~~~~vGDs~~D~~~~~~ag~~~------------~v~~~~~~~~~~a~~i~~~~~~~g~ 140 (154)
T TIGR01670 76 NKLIAFSDILEKL---ALAPENVAYIGDDLIDWPVMEKVGLSV------------AVADAHPLLIPRADYVTRIAGGRGA 140 (154)
T ss_pred chHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCCeE------------ecCCcCHHHHHhCCEEecCCCCCcH
Confidence 4899999999999 999999999999999999999999753 333222 356789988754 33
Q ss_pred HHHHHHHHHHhh
Q 002955 833 ILRMLLGLAEAS 844 (863)
Q Consensus 833 V~~~L~~L~~~~ 844 (863)
+.++++++....
T Consensus 141 ~~~~~~~~~~~~ 152 (154)
T TIGR01670 141 VREVCELLLLAQ 152 (154)
T ss_pred HHHHHHHHHHhh
Confidence 889998887653
No 126
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=98.96 E-value=7.2e-08 Score=109.99 Aligned_cols=167 Identities=9% Similarity=0.053 Sum_probs=107.7
Q ss_pred CeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEE
Q 002955 335 QIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVV 414 (863)
Q Consensus 335 ~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~ 414 (863)
+.++++.||+...||+..+++++ ++..|+++ ++.++. ..+ ++.+++.+ ..+ .. ..|
T Consensus 203 ~~ilv~~G~lg~~k~~~~li~~~---~~~~~~~~----~vvv~G----~~~---~l~~~l~~---~~~----~~--~~v- 258 (391)
T PRK13608 203 QTILMSAGAFGVSKGFDTMITDI---LAKSANAQ----VVMICG----KSK---ELKRSLTA---KFK----SN--ENV- 258 (391)
T ss_pred CEEEEECCCcccchhHHHHHHHH---HhcCCCce----EEEEcC----CCH---HHHHHHHH---Hhc----cC--CCe-
Confidence 34667899999999999999875 34456554 655552 122 22222222 121 11 123
Q ss_pred EEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC-----
Q 002955 415 LIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL----- 489 (863)
Q Consensus 415 ~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l----- 489 (863)
.+.|.+ +++..+|+.||++|.. +.|++..|||+| +.|+|++...+..+..
T Consensus 259 ~~~G~~--~~~~~~~~~aDl~I~k----~gg~tl~EA~a~-------------------G~PvI~~~~~pgqe~~N~~~~ 313 (391)
T PRK13608 259 LILGYT--KHMNEWMASSQLMITK----PGGITISEGLAR-------------------CIPMIFLNPAPGQELENALYF 313 (391)
T ss_pred EEEecc--chHHHHHHhhhEEEeC----CchHHHHHHHHh-------------------CCCEEECCCCCCcchhHHHHH
Confidence 344554 5799999999999863 458899999999 4557776533322211
Q ss_pred -CCceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHh
Q 002955 490 -SGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLERACRD 551 (863)
Q Consensus 490 -~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~ 551 (863)
..|.-+-+.|.++++++|.++++.+ +++....++.++....++....++.+++.+...++-
T Consensus 314 ~~~G~g~~~~~~~~l~~~i~~ll~~~-~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~~~~ 375 (391)
T PRK13608 314 EEKGFGKIADTPEEAIKIVASLTNGN-EQLTNMISTMEQDKIKYATQTICRDLLDLIGHSSQP 375 (391)
T ss_pred HhCCcEEEeCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhhhhhh
Confidence 1222233569999999999999754 444555566677777788888888888777665543
No 127
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.94 E-value=2.5e-09 Score=108.75 Aligned_cols=123 Identities=23% Similarity=0.289 Sum_probs=88.0
Q ss_pred ccceeEecCCccccCCC----CCCCCCCHHHH---HHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcEEE
Q 002955 591 KNRAILLDYDGTIMVPG----SISTSPNAEAV---AILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFV 663 (863)
Q Consensus 591 ~~rlI~~DlDGTLl~~~----~~~~~~s~~~~---~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa~I 663 (863)
.+|+|++|+||||++.. .....++..+. .+++.| ++.|+.++|+|||+...+..++..+ ++. .
T Consensus 20 ~ikli~~D~Dgtl~~~~i~~~~~~~~~~~~~~~d~~~i~~L-~~~Gi~v~I~T~~~~~~v~~~l~~l---gl~-----~- 89 (183)
T PRK09484 20 NIRLLICDVDGVFSDGLIYMGNNGEELKAFNVRDGYGIRCL-LTSGIEVAIITGRKSKLVEDRMTTL---GIT-----H- 89 (183)
T ss_pred CceEEEEcCCeeeecCEEEEcCCCCEEEEEeccchHHHHHH-HHCCCEEEEEeCCCcHHHHHHHHHc---CCc-----e-
Confidence 58999999999999731 11333333333 678887 6789999999999988888777532 110 0
Q ss_pred EeCCceeEEeecCCCCccHHHHHHHHHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcCCCeEE
Q 002955 664 RPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSV 743 (863)
Q Consensus 664 ~~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~~~v 743 (863)
+ |. |
T Consensus 90 -------~---------------------f~----g-------------------------------------------- 93 (183)
T PRK09484 90 -------L---------------------YQ----G-------------------------------------------- 93 (183)
T ss_pred -------e---------------------ec----C--------------------------------------------
Confidence 0 00 0
Q ss_pred EECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC----
Q 002955 744 KSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK---- 819 (863)
Q Consensus 744 ~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---- 819 (863)
.-+|..+++.+++++ |++++++++|||+.||++|++.+|.. +.++..
T Consensus 94 ------------~~~k~~~l~~~~~~~---gl~~~ev~~VGDs~~D~~~a~~aG~~--------------~~v~~~~~~~ 144 (183)
T PRK09484 94 ------------QSNKLIAFSDLLEKL---AIAPEQVAYIGDDLIDWPVMEKVGLS--------------VAVADAHPLL 144 (183)
T ss_pred ------------CCcHHHHHHHHHHHh---CCCHHHEEEECCCHHHHHHHHHCCCe--------------EecCChhHHH
Confidence 012668899999999 99999999999999999999999974 234442
Q ss_pred ccccceecC
Q 002955 820 PSKAKYYLD 828 (863)
Q Consensus 820 ~s~A~y~l~ 828 (863)
...|+|++.
T Consensus 145 ~~~a~~v~~ 153 (183)
T PRK09484 145 LPRADYVTR 153 (183)
T ss_pred HHhCCEEec
Confidence 356788885
No 128
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=98.86 E-value=9.1e-08 Score=113.58 Aligned_cols=181 Identities=12% Similarity=0.130 Sum_probs=119.8
Q ss_pred CCeEEEeecCcccccCHHHHHHHHHHHHH--hCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcc
Q 002955 334 GQIVMLGVDDMDIFKGISLKLLAMEQLLS--QNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQ 411 (863)
Q Consensus 334 ~~~vil~Vdrld~~KGi~~~l~A~~~ll~--~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~ 411 (863)
+..++..|.|+...||..+.+.+++++++ ++|+. .+.+|..|.....+. .-.++.+.+.+++++- .|. +
T Consensus 388 d~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~--pvq~V~~Gka~p~d~-~gk~~i~~i~~la~~~--~~~--~-- 458 (601)
T TIGR02094 388 DVLTIGFARRFATYKRADLIFRDLERLARILNNPER--PVQIVFAGKAHPADG-EGKEIIQRIVEFSKRP--EFR--G-- 458 (601)
T ss_pred CCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCC--CeEEEEEEecCcccc-hHHHHHHHHHHHHhcc--cCC--C--
Confidence 45688999999999999999999999986 55652 466777775432211 1133455555554420 021 1
Q ss_pred cEEEEcCCCCHHHHHHHHHhccceee-ccc-ccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC
Q 002955 412 PVVLIDTPLQFYERIAYYVIAECCLV-TAV-RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL 489 (863)
Q Consensus 412 pv~~~~~~v~~~el~aly~~ADv~vv-tS~-~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l 489 (863)
.|+++. ..+..--..+|.+||+++. ||. .|.-|+.-+-||.- |.|-.|-.-|...+.
T Consensus 459 kv~f~~-~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~n--------------------GgL~~sv~DG~~~E~ 517 (601)
T TIGR02094 459 RIVFLE-NYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMN--------------------GVLNLSILDGWWGEG 517 (601)
T ss_pred CEEEEc-CCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHc--------------------CCceeecccCccccc
Confidence 366655 3455555588999999999 777 89999988887773 556777777765554
Q ss_pred ---CCceEeCC------------CCHHHHHHHHHHHh-C----C-----CHHHHHHHHHHHhhhhccCCHHHHHHHHHHH
Q 002955 490 ---SGAIRVNP------------WNIDAVAEAMDSAL-G----V-----SDAEKQMRHEKHYRYVSTHDVAYWARSFLQD 544 (863)
Q Consensus 490 ---~~al~VnP------------~d~~~~A~ai~~aL-~----m-----~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~ 544 (863)
.+|..+.+ .|.+++-++|.+++ . . |..-.+.+.+.|......+++.+-++++...
T Consensus 518 ~~~~nGf~f~~~~~~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~ 597 (601)
T TIGR02094 518 YDGDNGWAIGDGEEYDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDK 597 (601)
T ss_pred CCCCcEEEECCCccccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHH
Confidence 34788875 89999999998877 2 1 1122333333344444458888888777653
No 129
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=98.81 E-value=4.1e-08 Score=99.84 Aligned_cols=192 Identities=18% Similarity=0.271 Sum_probs=126.4
Q ss_pred HHHHHHhhcCCCCeEEEEcCCChhhHHHHhh-c-c--CCceEEccCcEEEEeCCceeEEeecCCC--CccHHHHHHHHHH
Q 002955 618 VAILDNLCRDPKNVVFLVSGKDRDTLAEWFS-S-C--EGLGIAAEHGYFVRPNYGVDWETCVSVP--DFSWKQIAEPVMK 691 (863)
Q Consensus 618 ~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~-~-l--~~l~liaenGa~I~~~~~~~w~~~~~~~--~~~w~~~v~~i~~ 691 (863)
.+.|.+| . +.+.|.|+||-....+++-+. . + ....+.++||...+..+...|...+... +...++.+.-++.
T Consensus 2 ~~~L~~L-~-~~~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~enG~~~y~~~~~~~~~~~~~~lgee~~~~~in~~l~ 79 (220)
T PF03332_consen 2 AELLQKL-R-KKVPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFPENGLVAYKNGELIWSQSIAEFLGEEKLQKLINFCLR 79 (220)
T ss_dssp HHHHHHH-H-TTSEEEEEESS-HHHHHHHHSTTTHHHH-SEEEEGGGTEEEETTEEEEE--HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-H-hcCeEEEEcchhHHHHHHHHcccchHhhCCeeecCCCCeEEECCCchhhHhHHHHcCHHHHHHHHHHHHH
Confidence 5678887 3 379999999999998888773 2 2 2246789999999999988887653111 1122333333333
Q ss_pred HHhh----cCCCceeeeccceeEeec--ccCCC----Ccc----hh-hHHHHHHHHHHHhcCCCeEE-EECCcEEEEecC
Q 002955 692 LYTE----TTDGSTIETKESALVWNF--QYADP----DFG----SC-QAKELLDHLESVLANEPVSV-KSGPNIVEVKPQ 755 (863)
Q Consensus 692 ~y~~----~~~gs~ie~k~~~l~~~y--~~~d~----~~~----~~-~a~el~~~L~~~l~~~~~~v-~~g~~~vEI~p~ 755 (863)
+..+ ...|.+||.+...+.+.- +++.. .|. .. .-+.+.+.|++.+++..+.+ ..|...++|.|+
T Consensus 80 ~~~~l~lp~krGtfIE~R~gmIn~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L~~~f~d~~L~~siGGqiSiDvfp~ 159 (220)
T PF03332_consen 80 YISDLDLPVKRGTFIEFRGGMINFSPIGRNASQEERDEFDEYDKKHKIREKLVEALKKEFPDFGLTFSIGGQISIDVFPK 159 (220)
T ss_dssp HHHT---S---S-SEEEESSEEEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHHHHHTCCCSEEEEEETTTEEEEEET
T ss_pred HHHhCCCCccCCCceeecCCcEEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHHHHHCCCCceEEecCCceEEccccC
Confidence 3332 235999999998887742 33311 111 01 12346778888888877654 567899999999
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcceEEEEeC----CcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCCccccceecCCHh
Q 002955 756 GVNKGLVAQHQLETMHQKGMLPDFVLCIGD----DRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTA 831 (863)
Q Consensus 756 gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD----~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~A~y~l~d~~ 831 (863)
|++|..++++|.+. ..++++.||| +.||.++|...+. .+.+ |.+++
T Consensus 160 GwDKty~Lr~l~~~------~~~~I~FfGDkt~pGGNDyei~~~~rt-------------~g~~-----------V~~p~ 209 (220)
T PF03332_consen 160 GWDKTYCLRHLEDE------GFDEIHFFGDKTFPGGNDYEIFEDPRT-------------IGHT-----------VTSPE 209 (220)
T ss_dssp T-SGGGGGGGTTTT------T-SEEEEEESS-STTSTTHHHHHSTTS-------------EEEE------------SSHH
T ss_pred CccHHHHHHHHHhc------ccceEEEEehhccCCCCCceeeecCCc-------------cEEE-----------eCCHH
Confidence 99999999998653 2799999999 7999999987653 3333 56788
Q ss_pred HHHHHHHHHH
Q 002955 832 EILRMLLGLA 841 (863)
Q Consensus 832 eV~~~L~~L~ 841 (863)
+.++.|++|.
T Consensus 210 DT~~~l~~l~ 219 (220)
T PF03332_consen 210 DTIKQLKELF 219 (220)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 8888888875
No 130
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.78 E-value=1.3e-07 Score=104.17 Aligned_cols=65 Identities=17% Similarity=0.139 Sum_probs=54.0
Q ss_pred CCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC---ccccceecC--CHh
Q 002955 757 VNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK---PSKAKYYLD--DTA 831 (863)
Q Consensus 757 vsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---~s~A~y~l~--d~~ 831 (863)
..|+.+++.+++++ |++++++++|||+.||++|++.+|.+ |++..+ +..|++.++ +.+
T Consensus 247 k~K~~~L~~la~~l---gi~~~qtIaVGDg~NDl~m~~~AGlg--------------iA~nAkp~Vk~~Ad~~i~~~~l~ 309 (322)
T PRK11133 247 QYKADTLTRLAQEY---EIPLAQTVAIGDGANDLPMIKAAGLG--------------IAYHAKPKVNEQAQVTIRHADLM 309 (322)
T ss_pred ccHHHHHHHHHHHc---CCChhhEEEEECCHHHHHHHHHCCCe--------------EEeCCCHHHHhhCCEEecCcCHH
Confidence 47999999999999 99999999999999999999999974 444333 478999986 567
Q ss_pred HHHHHHH
Q 002955 832 EILRMLL 838 (863)
Q Consensus 832 eV~~~L~ 838 (863)
+|+.+|.
T Consensus 310 ~~l~~~~ 316 (322)
T PRK11133 310 GVLCILS 316 (322)
T ss_pred HHHHHhc
Confidence 7777664
No 131
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=98.78 E-value=6.6e-08 Score=95.05 Aligned_cols=199 Identities=19% Similarity=0.237 Sum_probs=135.3
Q ss_pred HHHhcccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhc-c-CC-ceEEccCcEE
Q 002955 586 AYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSS-C-EG-LGIAAEHGYF 662 (863)
Q Consensus 586 ~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~-l-~~-l~liaenGa~ 662 (863)
++++...-|+.||.||||++ ....+++++.+.|++| + +.+.+.++-|-..+.+.+-++. + .. ....+|||..
T Consensus 5 a~~r~~~~l~lfdvdgtLt~---~r~~~~~e~~~~l~~l-r-~~v~ig~VggsDl~k~~eqlG~~Vl~~fDY~F~ENGl~ 79 (252)
T KOG3189|consen 5 AAARDEETLCLFDVDGTLTP---PRQKVTPEMLEFLQKL-R-KKVTIGFVGGSDLSKQQEQLGDNVLEEFDYVFSENGLV 79 (252)
T ss_pred hhhcCCceEEEEecCCcccc---ccccCCHHHHHHHHHH-h-hheEEEEeecHHHHHHHHHhchhHHhhhcccccCCCee
Confidence 45667677999999999999 7889999999999998 3 4789999999988877777643 1 22 2455899988
Q ss_pred EEeCCceeEEeec-CC-CCccHHHHHHHHHHHHhh----cCCCceeeeccceeEeec--ccCCCC----c-----chhhH
Q 002955 663 VRPNYGVDWETCV-SV-PDFSWKQIAEPVMKLYTE----TTDGSTIETKESALVWNF--QYADPD----F-----GSCQA 725 (863)
Q Consensus 663 I~~~~~~~w~~~~-~~-~~~~w~~~v~~i~~~y~~----~~~gs~ie~k~~~l~~~y--~~~d~~----~-----~~~~a 725 (863)
-+..+...-.+.+ .. .+..+++.+.-++.+..+ ...|.++|-+...+.+.- |++..+ | ....-
T Consensus 80 ~yk~gk~~~~Qsi~~~LGee~~q~liNF~LrYlsdidlPiKRGtFiEFRNgMiNvsPIGR~cs~EER~eF~e~Dkk~~iR 159 (252)
T KOG3189|consen 80 AYKGGKLLSKQSIINHLGEEKLQELINFCLRYLSDIDLPIKRGTFIEFRNGMINVSPIGRNCSQEERNEFEELDKKHKIR 159 (252)
T ss_pred EeeCCcchhHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcccccceEEecCCceeccccccccCHHHHHHHHHhhhhhhhH
Confidence 7776653211111 00 011223333333444333 234899998876665431 333211 1 11223
Q ss_pred HHHHHHHHHHhcCCCeEE-EECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeC----CcchHHHHHH
Q 002955 726 KELLDHLESVLANEPVSV-KSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGD----DRSDEDMFEV 795 (863)
Q Consensus 726 ~el~~~L~~~l~~~~~~v-~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD----~~ND~~Mf~~ 795 (863)
..+.+.|++.+++.++.. +.|+-.++|.|.|++|-..++++-+. ..+.+-.||| +.||.+.|..
T Consensus 160 ~K~v~~Lr~~F~~~gLtFSIGGQISfDvFP~GWDKtyCLqhle~d------gf~~IhFFGDkT~~GGNDyEIf~d 228 (252)
T KOG3189|consen 160 EKFVEALREEFADYGLTFSIGGQISFDVFPKGWDKTYCLQHLEKD------GFDTIHFFGDKTMPGGNDYEIFAD 228 (252)
T ss_pred HHHHHHHHHHhcccCeeEEECCeEEEeecCCCcchhHHHHHhhhc------CCceEEEeccccCCCCCcceeeeC
Confidence 456788888888887655 55778999999999999999888654 2688999999 7899888754
No 132
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=98.78 E-value=7e-09 Score=99.29 Aligned_cols=128 Identities=19% Similarity=0.202 Sum_probs=88.5
Q ss_pred CeEEEeecCcccccCHHHHHH-HHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccE
Q 002955 335 QIVMLGVDDMDIFKGISLKLL-AMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPV 413 (863)
Q Consensus 335 ~~vil~Vdrld~~KGi~~~l~-A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv 413 (863)
..++++.|++...||+..+++ |++++.+++|+++ |+.+|... + + +.++ + ...|
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~----l~i~G~~~-----~--~----l~~~----~-------~~~v 55 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIE----LIIIGNGP-----D--E----LKRL----R-------RPNV 55 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEE----EEEECESS--------H----HCCH----H-------HCTE
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEE----EEEEeCCH-----H--H----HHHh----c-------CCCE
Confidence 357899999999999999999 9999999999755 88888522 2 1 2111 0 0124
Q ss_pred EEEcCCCCHHHHHHHHHhccceeeccc-ccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC---
Q 002955 414 VLIDTPLQFYERIAYYVIAECCLVTAV-RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL--- 489 (863)
Q Consensus 414 ~~~~~~v~~~el~aly~~ADv~vvtS~-~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l--- 489 (863)
. +.+.+ +|+.++|+.||+++.|+. .++++...+|||++ |.|+|+|.. |+....
T Consensus 56 ~-~~g~~--~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~-------------------G~pvi~~~~-~~~~~~~~~ 112 (135)
T PF13692_consen 56 R-FHGFV--EELPEILAAADVGLIPSRFNEGFPNKLLEAMAA-------------------GKPVIASDN-GAEGIVEED 112 (135)
T ss_dssp E-EE-S---HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCT-------------------T--EEEEHH-HCHCHS---
T ss_pred E-EcCCH--HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHh-------------------CCCEEECCc-chhhheeec
Confidence 3 44556 689999999999999984 78999999999999 566888888 656555
Q ss_pred CCceEeCCCCHHHHHHHHHHHhC
Q 002955 490 SGAIRVNPWNIDAVAEAMDSALG 512 (863)
Q Consensus 490 ~~al~VnP~d~~~~A~ai~~aL~ 512 (863)
..++.+ +.|.++++++|.++++
T Consensus 113 ~~~~~~-~~~~~~l~~~i~~l~~ 134 (135)
T PF13692_consen 113 GCGVLV-ANDPEELAEAIERLLN 134 (135)
T ss_dssp SEEEE--TT-HHHHHHHHHHHHH
T ss_pred CCeEEE-CCCHHHHHHHHHHHhc
Confidence 236666 8899999999999875
No 133
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.74 E-value=4.1e-07 Score=103.07 Aligned_cols=133 Identities=18% Similarity=0.190 Sum_probs=86.8
Q ss_pred CCeE-EEe-ecCcccccC-HHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCc
Q 002955 334 GQIV-MLG-VDDMDIFKG-ISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGY 410 (863)
Q Consensus 334 ~~~v-il~-Vdrld~~KG-i~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~ 410 (863)
++++ ++. -+|....|+ +...++|++.+.+++|+++ +++++. .++..+++ .+++.+. + +.
T Consensus 185 ~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~----~ii~~~----~~~~~~~~----~~~~~~~----~--~~ 246 (380)
T PRK00025 185 DARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLR----FVLPLV----NPKRREQI----EEALAEY----A--GL 246 (380)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeE----EEEecC----ChhhHHHH----HHHHhhc----C--CC
Confidence 4444 333 347766544 6788999999988888765 666652 11222223 3332221 0 11
Q ss_pred ccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEec----------
Q 002955 411 QPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVS---------- 480 (863)
Q Consensus 411 ~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlS---------- 480 (863)
.+.++. .++..+|+.||++|.+| |.+.+|+|+| +.|+|++
T Consensus 247 -~v~~~~-----~~~~~~~~~aDl~v~~s-----G~~~lEa~a~-------------------G~PvI~~~~~~~~~~~~ 296 (380)
T PRK00025 247 -EVTLLD-----GQKREAMAAADAALAAS-----GTVTLELALL-------------------KVPMVVGYKVSPLTFWI 296 (380)
T ss_pred -CeEEEc-----ccHHHHHHhCCEEEECc-----cHHHHHHHHh-------------------CCCEEEEEccCHHHHHH
Confidence 133433 37899999999999998 6788899999 4456665
Q ss_pred -------ccccCcccCCC-----ceEeCCCCHHHHHHHHHHHhCCC
Q 002955 481 -------EFVGCSPSLSG-----AIRVNPWNIDAVAEAMDSALGVS 514 (863)
Q Consensus 481 -------e~~G~~~~l~~-----al~VnP~d~~~~A~ai~~aL~m~ 514 (863)
.+.|..+.+.+ +++++..|.+++++++.++|+.+
T Consensus 297 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~ 342 (380)
T PRK00025 297 AKRLVKVPYVSLPNLLAGRELVPELLQEEATPEKLARALLPLLADG 342 (380)
T ss_pred HHHHHcCCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcCH
Confidence 34454555532 36678889999999999999865
No 134
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.74 E-value=2.9e-08 Score=94.12 Aligned_cols=55 Identities=22% Similarity=0.308 Sum_probs=45.8
Q ss_pred eeEecCCccccCCCC-----CCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhc
Q 002955 594 AILLDYDGTIMVPGS-----ISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSS 649 (863)
Q Consensus 594 lI~~DlDGTLl~~~~-----~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~ 649 (863)
+++||+||||++..+ ....+.+.+.+.|++| ++.|+.++|+||+....+..++..
T Consensus 1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~g~~i~ivS~~~~~~~~~~~~~ 60 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKEL-KEKGIKLALATNKSRREVLELLEE 60 (139)
T ss_pred CeEEccCCceEccCccccccccCCcCcCHHHHHHHH-HHCCCeEEEEeCchHHHHHHHHHH
Confidence 589999999998431 1137789999999998 667999999999999999998864
No 135
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.68 E-value=6.9e-08 Score=96.46 Aligned_cols=142 Identities=18% Similarity=0.119 Sum_probs=97.2
Q ss_pred cceeEecCCccccCCC---CC----CCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcEEEE
Q 002955 592 NRAILLDYDGTIMVPG---SI----STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVR 664 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~---~~----~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa~I~ 664 (863)
+|+++||+||||++.+ .. .+..+.+-..+++.| ++.|+.++|+|+.+...+...+..+ ++.
T Consensus 7 i~~~v~d~dGv~tdg~~~~~~~g~~~~~~~~~D~~~~~~L-~~~Gi~laIiT~k~~~~~~~~l~~l---gi~-------- 74 (169)
T TIGR02726 7 IKLVILDVDGVMTDGRIVINDEGIESRNFDIKDGMGVIVL-QLCGIDVAIITSKKSGAVRHRAEEL---KIK-------- 74 (169)
T ss_pred CeEEEEeCceeeECCeEEEcCCCcEEEEEecchHHHHHHH-HHCCCEEEEEECCCcHHHHHHHHHC---CCc--------
Confidence 7999999999999731 01 123456667788887 7778999999998888777776432 110
Q ss_pred eCCceeEEeecCCCCccHHHHHHHHHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcCCCeEEE
Q 002955 665 PNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVK 744 (863)
Q Consensus 665 ~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~ 744 (863)
.|.. .
T Consensus 75 -----~~f~------------------------------------------~---------------------------- 79 (169)
T TIGR02726 75 -----RFHE------------------------------------------G---------------------------- 79 (169)
T ss_pred -----EEEe------------------------------------------c----------------------------
Confidence 0000 0
Q ss_pred ECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCCccccc
Q 002955 745 SGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAK 824 (863)
Q Consensus 745 ~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~A~ 824 (863)
+. .|...++.+++++ |++++++++|||+.||++|++.+|.++++.++.+ ..+..|+
T Consensus 80 -------~k----pkp~~~~~~~~~l---~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~----------~lk~~A~ 135 (169)
T TIGR02726 80 -------IK----KKTEPYAQMLEEM---NISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVA----------DVKEAAA 135 (169)
T ss_pred -------CC----CCHHHHHHHHHHc---CcCHHHEEEECCCHHHHHHHHHCCCeEECcCchH----------HHHHhCC
Confidence 01 3677889999998 9999999999999999999999998643322111 1357789
Q ss_pred eecCC--HhH-HHHHHHHHHHhh
Q 002955 825 YYLDD--TAE-ILRMLLGLAEAS 844 (863)
Q Consensus 825 y~l~d--~~e-V~~~L~~L~~~~ 844 (863)
|++.+ .++ +.++++.+....
T Consensus 136 ~I~~~~~~~g~v~e~~e~il~~~ 158 (169)
T TIGR02726 136 YVTTARGGHGAVREVAELILKAQ 158 (169)
T ss_pred EEcCCCCCCCHHHHHHHHHHHhc
Confidence 98742 333 566666666543
No 136
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=98.62 E-value=1e-06 Score=98.30 Aligned_cols=237 Identities=13% Similarity=0.044 Sum_probs=132.7
Q ss_pred HHhhcCCCCCEEEEeCcccch--HHH-HHHh-hCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHH
Q 002955 192 VMEVISPDDDFVWVHDYHLMV--LPT-FLRK-RFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYA 267 (863)
Q Consensus 192 i~~~~~p~~D~VwvhDyhl~l--lp~-~lr~-~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~ 267 (863)
+...++| +|+|.+|-.-+.. ++. ++++ +..++|+.+++|.=||..-.. .-.........+-.||.|..++....
T Consensus 58 ~~~~~~~-~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~~~~-~~~~~~~~~~~~~~aD~iI~~S~~~~ 135 (333)
T PRK09814 58 ILASLKP-GDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLRFDS-NYYLMKEEIDMLNLADVLIVHSKKMK 135 (333)
T ss_pred HHhcCCC-CCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHhccc-cchhhHHHHHHHHhCCEEEECCHHHH
Confidence 4455677 4999998643321 222 2222 112699999999877642110 00012233445556899999888766
Q ss_pred HHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCcccc
Q 002955 268 RHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIF 347 (863)
Q Consensus 268 ~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~ 347 (863)
+.+.+ .|+. ..++.+.|+..+..... + +....+++.|+++||+...
T Consensus 136 ~~l~~-----~g~~---------------~~~i~~~~~~~~~~~~~-----~---------~~~~~~~~~i~yaG~l~k~ 181 (333)
T PRK09814 136 DRLVE-----EGLT---------------TDKIIVQGIFDYLNDIE-----L---------VKTPSFQKKINFAGNLEKS 181 (333)
T ss_pred HHHHH-----cCCC---------------cCceEeccccccccccc-----c---------cccccCCceEEEecChhhc
Confidence 55543 1221 01122233322221000 0 0111345689999999843
Q ss_pred cCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHH
Q 002955 348 KGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIA 427 (863)
Q Consensus 348 KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~a 427 (863)
.++. +..|+++ |+++|.. ++.. . . .+-+.+.|.++.+|+..
T Consensus 182 ~~l~----------~~~~~~~----l~i~G~g-----~~~~-----------~--------~-~~~V~f~G~~~~eel~~ 222 (333)
T PRK09814 182 PFLK----------NWSQGIK----LTVFGPN-----PEDL-----------E--------N-SANISYKGWFDPEELPN 222 (333)
T ss_pred hHHH----------hcCCCCe----EEEECCC-----cccc-----------c--------c-CCCeEEecCCCHHHHHH
Confidence 3211 1345544 7777732 2111 0 0 12245678999999999
Q ss_pred HHHhccceeecccc-----------cCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC---Cce
Q 002955 428 YYVIAECCLVTAVR-----------DGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAI 493 (863)
Q Consensus 428 ly~~ADv~vvtS~~-----------EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---~al 493 (863)
+|+. |+.+++.-. -.++--..||||| |.|+|++..++.++.+. .|+
T Consensus 223 ~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~-------------------G~PVI~~~~~~~~~~V~~~~~G~ 282 (333)
T PRK09814 223 ELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAA-------------------GLPVIVWSKAAIADFIVENGLGF 282 (333)
T ss_pred HHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHC-------------------CCCEEECCCccHHHHHHhCCceE
Confidence 9988 666554311 1233336778999 56799999988888882 388
Q ss_pred EeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhh
Q 002955 494 RVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRY 528 (863)
Q Consensus 494 ~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~ 528 (863)
.|+ +.++++++|... ++++++...++.++.
T Consensus 283 ~v~--~~~el~~~l~~~---~~~~~~~m~~n~~~~ 312 (333)
T PRK09814 283 VVD--SLEELPEIIDNI---TEEEYQEMVENVKKI 312 (333)
T ss_pred EeC--CHHHHHHHHHhc---CHHHHHHHHHHHHHH
Confidence 887 688999999873 345544444444433
No 137
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=98.62 E-value=1.9e-06 Score=101.05 Aligned_cols=256 Identities=15% Similarity=0.112 Sum_probs=163.8
Q ss_pred HHHHHHHHHHHHHHhh----cCCCCCEEE--EeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCC--hHHHHH
Q 002955 180 AYVSVNKIFADKVMEV----ISPDDDFVW--VHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPI--RDELLR 251 (863)
Q Consensus 180 ~Y~~vN~~fa~~i~~~----~~p~~D~Vw--vhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~--r~eil~ 251 (863)
.|...+..++..+-+. .. ++|++. ++.-|... +....|..++.+..|+ ... |. -+..+.
T Consensus 202 ~f~~~~eLi~efl~~l~~~~~~-~~d~~Iva~Dr~~~~~----~~~~~~~~~~~ls~f~---~~~-----~~~~y~~~l~ 268 (519)
T TIGR03713 202 EYSNMDELIREKFQRYLKVEVK-DDDEIIVASDDRHNFL----VADTFPAKNLIFSLFS---ERN-----RHHTYLDLYE 268 (519)
T ss_pred EECCHHHHHHHHHHHHHHhhCC-CCCEEEEEcCchhhhh----HhhcCccceEEEEecc---Ccc-----cccchhhhhh
Confidence 3444555555554433 33 458877 77777766 4444554455556665 111 22 245666
Q ss_pred HHHhCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHH
Q 002955 252 ALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQ 331 (863)
Q Consensus 252 ~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~ 331 (863)
.+-.+|.|-.-|.+-.+...... +- .. ....|..+|++.-...+ ...++
T Consensus 269 ~~~~~d~iIv~T~~q~~~l~~~~----~~------------~~-~~~~v~~Ip~~~~~~~~--------------~~s~r 317 (519)
T TIGR03713 269 SLSRADLIIVDREDIERLLEENY----RE------------NY-VEFDISRITPFDTRLRL--------------GQSQQ 317 (519)
T ss_pred ChhhcCeEEEcCHHHHHHHHHHh----hh------------cc-cCCcceeeCccceEEec--------------Chhhc
Confidence 77777877665654333222110 00 00 11233345554331100 11233
Q ss_pred hCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCc-
Q 002955 332 FKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGY- 410 (863)
Q Consensus 332 ~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~- 410 (863)
..++.|.+++||+ +.|-+...++|+.++++++|+.. |...|.. .. .+....+.++++++|..++....
T Consensus 318 ~~~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~----L~~~gy~---~~---~~~~~~l~~~i~~~~~~~~~~~~~ 386 (519)
T TIGR03713 318 LYETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYE----LKILTYN---ND---NDITQLLEDILEQINEEYNQDKNF 386 (519)
T ss_pred ccceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeE----EEEEEec---Cc---hhHHHHHHHHHHHHHhhhchhhhc
Confidence 3567788888899 99999999999999999999977 7766632 11 23456666777777766432110
Q ss_pred ------------------c---cEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCC
Q 002955 411 ------------------Q---PVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDP 469 (863)
Q Consensus 411 ------------------~---pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~ 469 (863)
. ..+.+.+..+..++.+.|..|.++|.+|..|||+ +.+|||+.
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~--------------- 450 (519)
T TIGR03713 387 FSLSEQDENQPILQTDEEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISA--------------- 450 (519)
T ss_pred cccchhhhhhhcccchhhcccccEEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHc---------------
Confidence 0 2566777778889999999999999999999999 99999997
Q ss_pred CCCCCccEEecccccCcccC---CCceEeCCCCHHHHHHHHHHHhCCCH
Q 002955 470 STAKSSMLVVSEFVGCSPSL---SGAIRVNPWNIDAVAEAMDSALGVSD 515 (863)
Q Consensus 470 ~~~~~g~lVlSe~~G~~~~l---~~al~VnP~d~~~~A~ai~~aL~m~~ 515 (863)
|-|.| .-|.++.+ .+|.+| .|+.++++||...|+.+.
T Consensus 451 ----GiPqI---nyg~~~~V~d~~NG~li--~d~~~l~~al~~~L~~~~ 490 (519)
T TIGR03713 451 ----GIPQI---NKVETDYVEHNKNGYII--DDISELLKALDYYLDNLK 490 (519)
T ss_pred ----CCCee---ecCCceeeEcCCCcEEe--CCHHHHHHHHHHHHhCHH
Confidence 33444 55667666 358999 699999999999998653
No 138
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=98.61 E-value=1.1e-06 Score=93.66 Aligned_cols=311 Identities=15% Similarity=0.245 Sum_probs=181.4
Q ss_pred hhHHHHHHHHHHHHHHHHh---hc--CCCCCEEEEe--CcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHH
Q 002955 176 SLWQAYVSVNKIFADKVME---VI--SPDDDFVWVH--DYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDE 248 (863)
Q Consensus 176 ~~w~~Y~~vN~~fa~~i~~---~~--~p~~D~Vwvh--Dyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~e 248 (863)
..|..+.-.-|..+.-|+. .+ .| =|||- .|-+. .|.+ |. +.+.|+|-+.|-|--|.+....+-.|++
T Consensus 124 ~~~~hfTllgQaigsmIl~~Eai~r~~P---di~IDtMGY~fs-~p~~-r~-l~~~~V~aYvHYP~iS~DML~~l~qrq~ 197 (465)
T KOG1387|consen 124 STWKHFTLLGQAIGSMILAFEAIIRFPP---DIFIDTMGYPFS-YPIF-RR-LRRIPVVAYVHYPTISTDMLKKLFQRQK 197 (465)
T ss_pred ccccceehHHHHHHHHHHHHHHHHhCCc---hheEecCCCcch-hHHH-HH-HccCceEEEEecccccHHHHHHHHhhhh
Confidence 3455555555555544432 12 24 26764 45443 2333 22 5689999999988777776654433322
Q ss_pred HHHHHHhCCEecccCHHHHHHHHHHHHhhhCceec------c-cCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchH
Q 002955 249 LLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQ------S-KRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPET 321 (863)
Q Consensus 249 il~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~------~-~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~ 321 (863)
= .+...---.|-|-|..--+ ..|--.+ + .+.+|.--+..+++.+ |+|+. +++.+++...+
T Consensus 198 s-------~~l~~~KlaY~rlFa~lY~-~~G~~ad~vm~NssWT~nHI~qiW~~~~~~i-VyPPC-~~e~lks~~~t--- 264 (465)
T KOG1387|consen 198 S-------GILVWGKLAYWRLFALLYQ-SAGSKADIVMTNSSWTNNHIKQIWQSNTCSI-VYPPC-STEDLKSKFGT--- 264 (465)
T ss_pred c-------chhhhHHHHHHHHHHHHHH-hccccceEEEecchhhHHHHHHHhhccceeE-EcCCC-CHHHHHHHhcc---
Confidence 1 1221222345555542211 1121100 0 0112211233333333 44533 33333322111
Q ss_pred HHHHHHHHHHhCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCC--CCCceEEEEEecCCCCCchhHHHHHHHHHHHHH
Q 002955 322 EAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPS--KRGKIVLVQIANPARGRGRDVQEVQSETHATVR 399 (863)
Q Consensus 322 ~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~--~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~ 399 (863)
.-+....+|+++.+.|.|+.. .|+-+...+.++|. .-.++.|+++|. .|++ +-++.-+.++.+++
T Consensus 265 ---------e~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivGS-cRne--eD~ervk~Lkd~a~ 331 (465)
T KOG1387|consen 265 ---------EGERENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVGS-CRNE--EDEERVKSLKDLAE 331 (465)
T ss_pred ---------cCCcceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEec-cCCh--hhHHHHHHHHHHHH
Confidence 012356899999999999999 67777778888887 334677887773 3443 32344455666666
Q ss_pred HHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEe
Q 002955 400 RINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVV 479 (863)
Q Consensus 400 ~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVl 479 (863)
+++-. .-+.+.-.+|.+++..+|..|-+-|-+-..|-||+.+.||||++ .+.+
T Consensus 332 ~L~i~-------~~v~F~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAG--------------------lIpi 384 (465)
T KOG1387|consen 332 ELKIP-------KHVQFEKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAAG--------------------LIPI 384 (465)
T ss_pred hcCCc-------cceEEEecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhcC--------------------ceEE
Confidence 66422 12345568999999999999999999999999999999999983 2333
Q ss_pred cccccCcc--cC---C---CceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHH
Q 002955 480 SEFVGCSP--SL---S---GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLER 547 (863)
Q Consensus 480 Se~~G~~~--~l---~---~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 547 (863)
+..+|... .+ . .|++. | +.++-|++|.+++++..+||....+..+..+.++.-....+.|...+..
T Consensus 385 ~h~SgGP~lDIV~~~~G~~tGFla-~-t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~k 458 (465)
T KOG1387|consen 385 VHNSGGPLLDIVTPWDGETTGFLA-P-TDEEYAEAILKIVKLNYDERNMMRRNARKSLARFGELKFDKDWENPICK 458 (465)
T ss_pred EeCCCCCceeeeeccCCccceeec-C-ChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHH
Confidence 33333111 11 1 25554 3 5678999999999999998777666677767666666666666544433
No 139
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=98.57 E-value=1.3e-06 Score=93.88 Aligned_cols=59 Identities=17% Similarity=0.326 Sum_probs=46.3
Q ss_pred cceeEecCCccccCCCCCCC---CCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCce
Q 002955 592 NRAILLDYDGTIMVPGSIST---SPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLG 654 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~~~~~---~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~ 654 (863)
+|+|+||+||||+. .+. .+.+.+.++|++| ++.|..++++|||+......+...+..++
T Consensus 1 ~k~i~~D~DGtl~~---~~~~~~~~~~~a~~al~~l-~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g 62 (257)
T TIGR01458 1 VKGVLLDISGVLYI---SDAKSGVAVPGSQEAVKRL-RGASVKVRFVTNTTKESKQDLLERLQRLG 62 (257)
T ss_pred CCEEEEeCCCeEEe---CCCcccCcCCCHHHHHHHH-HHCCCeEEEEECCCCCCHHHHHHHHHHcC
Confidence 47999999999998 333 3788999999998 88899999999988876555544433333
No 140
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.55 E-value=1.2e-07 Score=90.50 Aligned_cols=71 Identities=18% Similarity=0.222 Sum_probs=52.7
Q ss_pred CHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCC--CccccceecC---CHhH
Q 002955 758 NKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ--KPSKAKYYLD---DTAE 832 (863)
Q Consensus 758 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~--~~s~A~y~l~---d~~e 832 (863)
+|-.+.+.|++++ ++.+++|.++|||.||+++|+.+|.++| ++-+. .+.+|.|++. ....
T Consensus 83 dK~~a~~~L~~~~---~l~~e~~ayiGDD~~Dlpvm~~vGls~a------------~~dAh~~v~~~a~~Vt~~~GG~GA 147 (170)
T COG1778 83 DKLAAFEELLKKL---NLDPEEVAYVGDDLVDLPVMEKVGLSVA------------VADAHPLLKQRADYVTSKKGGEGA 147 (170)
T ss_pred hHHHHHHHHHHHh---CCCHHHhhhhcCccccHHHHHHcCCccc------------ccccCHHHHHhhHhhhhccCcchH
Confidence 4777889999999 9999999999999999999999998643 32222 3577888875 2344
Q ss_pred HHHHHHHHHHh
Q 002955 833 ILRMLLGLAEA 843 (863)
Q Consensus 833 V~~~L~~L~~~ 843 (863)
|.++.+-+...
T Consensus 148 vREv~dlil~a 158 (170)
T COG1778 148 VREVCDLILQA 158 (170)
T ss_pred HHHHHHHHHHc
Confidence 55555554443
No 141
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=98.47 E-value=1.6e-05 Score=96.50 Aligned_cols=181 Identities=12% Similarity=0.074 Sum_probs=116.8
Q ss_pred EEEeecCcccccCHHHHHHHHHHHHH--hCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEE
Q 002955 337 VMLGVDDMDIFKGISLKLLAMEQLLS--QNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVV 414 (863)
Q Consensus 337 vil~Vdrld~~KGi~~~l~A~~~ll~--~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~ 414 (863)
+|.++.|+...||..+++..+++|.+ .+|+ ..+.+|..|...-.+. .-.++.+.+.++++.- +|. + .|+
T Consensus 480 tigfarRfa~YKR~~Lil~dl~rl~~il~~~~--~pvQ~IfaGKAhP~d~-~gK~iIk~i~~~a~~p--~~~--~--kVv 550 (778)
T cd04299 480 TIGFARRFATYKRATLLLRDPERLKRLLNDPE--RPVQFIFAGKAHPADE-PGKELIQEIVEFSRRP--EFR--G--RIV 550 (778)
T ss_pred EEeeeecchhhhhHHHHHHHHHHHHHHhhCCC--CCeEEEEEEecCccch-HHHHHHHHHHHHHhCc--CCC--C--cEE
Confidence 78899999999999999999999865 3444 2477777774331111 1123444444444310 221 1 466
Q ss_pred EEcCCCCHHHHHHHHHhccceeeccc--ccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC---
Q 002955 415 LIDTPLQFYERIAYYVIAECCLVTAV--RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL--- 489 (863)
Q Consensus 415 ~~~~~v~~~el~aly~~ADv~vvtS~--~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l--- 489 (863)
++. ..+..--..++..||+++.||. .|.-|+.-+-|+. .|+|-+|..-|...+-
T Consensus 551 fle-~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~--------------------NG~LnlSvlDGww~E~~~g 609 (778)
T cd04299 551 FLE-DYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAAL--------------------NGGLNLSVLDGWWDEGYDG 609 (778)
T ss_pred EEc-CCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHH--------------------cCCeeeecccCccccccCC
Confidence 665 3555555689999999999999 8888887766666 3778888888876665
Q ss_pred CCceEeCC------------CCHHHHHHHHHHHhC----------CCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHH
Q 002955 490 SGAIRVNP------------WNIDAVAEAMDSALG----------VSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLER 547 (863)
Q Consensus 490 ~~al~VnP------------~d~~~~A~ai~~aL~----------m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 547 (863)
.+|..+.+ .|.+++-+.|.+.+- .|..-.+.+.+.+......+++.+-++.++..+..
T Consensus 610 ~nGwaig~~~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y~ 689 (778)
T cd04299 610 ENGWAIGDGDEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFYL 689 (778)
T ss_pred CCceEeCCCccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhHH
Confidence 24777777 455566666654443 13233333333344445568888888888877763
No 142
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=98.45 E-value=6.7e-07 Score=95.53 Aligned_cols=54 Identities=22% Similarity=0.335 Sum_probs=45.0
Q ss_pred cceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcC---CChhhHHHHhhcc
Q 002955 592 NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSG---KDRDTLAEWFSSC 650 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TG---R~~~~l~~~~~~l 650 (863)
+|+|+||+||||+. .+..++ .+.++|++| ++.|+.|+++|| |+...+.+.+..+
T Consensus 1 ~~~~~~D~DGtl~~---~~~~i~-~a~~~l~~l-~~~g~~~~~~Tnn~~r~~~~~~~~l~~~ 57 (249)
T TIGR01457 1 YKGYLIDLDGTMYK---GKERIP-EAETFVHEL-QKRDIPYLFVTNNSTRTPESVAEMLASF 57 (249)
T ss_pred CCEEEEeCCCceEc---CCeeCc-CHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHHHHHc
Confidence 37899999999998 444444 789999998 889999999995 8888888877654
No 143
>PRK10444 UMP phosphatase; Provisional
Probab=98.43 E-value=5.4e-06 Score=88.41 Aligned_cols=59 Identities=17% Similarity=0.214 Sum_probs=50.2
Q ss_pred cceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceE
Q 002955 592 NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGI 655 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~l 655 (863)
+|+|+||+||||+. .+ .+.+.+.++|++| ++.|..++++|+|+......+...+..+|+
T Consensus 1 ~~~v~~DlDGtL~~---~~-~~~p~a~~~l~~L-~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~ 59 (248)
T PRK10444 1 IKNVICDIDGVLMH---DN-VAVPGAAEFLHRI-LDKGLPLVLLTNYPSQTGQDLANRFATAGV 59 (248)
T ss_pred CcEEEEeCCCceEe---CC-eeCccHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHHHHHcCC
Confidence 57999999999998 33 7889999999999 888999999999999888777776655555
No 144
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=98.42 E-value=1.8e-06 Score=93.79 Aligned_cols=59 Identities=20% Similarity=0.335 Sum_probs=44.7
Q ss_pred cceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceE
Q 002955 592 NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGI 655 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~l 655 (863)
+++|+||+||||+. .. .+.+.+.++|++| ++.|..|+++|+|+......++..+..+|+
T Consensus 2 ~~~~~~D~DGtl~~---~~-~~~~ga~e~l~~L-~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~ 60 (279)
T TIGR01452 2 AQGFIFDCDGVLWL---GE-RVVPGAPELLDRL-ARAGKAALFVTNNSTKSRAEYALKFARLGF 60 (279)
T ss_pred ccEEEEeCCCceEc---CC-eeCcCHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHHHHHcCC
Confidence 58999999999998 33 3455599999998 888999999999886655555444433443
No 145
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=98.41 E-value=4.7e-07 Score=89.60 Aligned_cols=52 Identities=12% Similarity=0.261 Sum_probs=45.4
Q ss_pred eeEecCCccccCCCCCC-----------CCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHH---HHhhc
Q 002955 594 AILLDYDGTIMVPGSIS-----------TSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLA---EWFSS 649 (863)
Q Consensus 594 lI~~DlDGTLl~~~~~~-----------~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~---~~~~~ 649 (863)
++++|+||||+. ++ ..+++.+.++++++ +++|+.|+++|||+..... +|+..
T Consensus 1 iVisDIDGTL~~---sd~~~~~~~~~~~~~~~~~~~~a~~~l-~~~G~~ivy~TGRp~~~~~~t~~~l~~ 66 (157)
T smart00775 1 IVISDIDGTITK---SDVLGHVVPIIGKDWTHPGVAKLYRDI-QNNGYKILYLTARPIGQADRTRSYLSQ 66 (157)
T ss_pred CEEEecCCCCcc---cccccccccccccCcCCHHHHHHHHHH-HHcCCeEEEEcCCcHHHHHHHHHHHHH
Confidence 589999999998 44 57899999999998 8899999999999988774 67755
No 146
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=98.40 E-value=2.9e-06 Score=91.74 Aligned_cols=70 Identities=19% Similarity=0.301 Sum_probs=59.6
Q ss_pred CHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC------ccccceecCCHh
Q 002955 758 NKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------PSKAKYYLDDTA 831 (863)
Q Consensus 758 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~A~y~l~d~~ 831 (863)
.|..++.++++++ +++++++++|||+.+|+.+.+.+|.. +++|..|.. ...|+|++++..
T Consensus 196 ~k~~~~~~~l~~~---~~~p~~~l~IGDs~~Di~aA~~AG~~-----------~I~v~~g~~~~~~l~~~~ad~~i~~~~ 261 (273)
T PRK13225 196 SKRRALSQLVARE---GWQPAAVMYVGDETRDVEAARQVGLI-----------AVAVTWGFNDRQSLVAACPDWLLETPS 261 (273)
T ss_pred CCHHHHHHHHHHh---CcChhHEEEECCCHHHHHHHHHCCCe-----------EEEEecCCCCHHHHHHCCCCEEECCHH
Confidence 4778899999998 99999999999999999999999873 467777742 246899999999
Q ss_pred HHHHHHHHHH
Q 002955 832 EILRMLLGLA 841 (863)
Q Consensus 832 eV~~~L~~L~ 841 (863)
++..++.+|.
T Consensus 262 eL~~~~~~~~ 271 (273)
T PRK13225 262 DLLQAVTQLM 271 (273)
T ss_pred HHHHHHHHHh
Confidence 9999888775
No 147
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=98.35 E-value=7.5e-05 Score=86.45 Aligned_cols=309 Identities=15% Similarity=0.222 Sum_probs=145.1
Q ss_pred EEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCC-------ChhHhhcCCC--hHHHHHHHHhCCEecccCHHHHHHHHH
Q 002955 202 FVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFP-------SSEIYRTLPI--RDELLRALLNADLIGFHTFDYARHFLS 272 (863)
Q Consensus 202 ~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP-------~~e~~r~lp~--r~eil~~ll~~dligF~t~~~~~~Fl~ 272 (863)
+.+.|.|..-+-..+||++.|.+.-.|+.|.--+ ..++|..|+. .++...- -.-+.+|.++
T Consensus 146 iaHfHEWmaG~gll~lr~~~~~VaTvFTTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~----------~~i~~k~~iE 215 (633)
T PF05693_consen 146 IAHFHEWMAGVGLLYLRKRKPDVATVFTTHATLLGRYLAANNKDFYNNLDKFNGDQEAGE----------RNIYHKHSIE 215 (633)
T ss_dssp EEEEESGGGTTHHHHHHHTT-SCEEEEEESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHH----------TT-HHHHHHH
T ss_pred EEEechHhHhHHHHHHhccCCCeeEEEEecccchhhHhhcCCCcHHHHhhccCccccccC----------ccchHHHHHH
Confidence 5677888877777889999999999999995332 1223333331 1111100 0012445544
Q ss_pred HHHhhhCceecccCceee---EEEcCeEEEEEEeccccCchHHHhhcC----CchHHHHHHHH-HHHh-------CCCe-
Q 002955 273 CCSRMLGVSYQSKRGYIG---LEYFGRTVSIKILPVGIHIGQLQSVLN----LPETEAKVAEL-QDQF-------KGQI- 336 (863)
Q Consensus 273 ~~~r~lg~~~~~~~~~~~---~~~~gr~~~i~v~p~GId~~~~~~~~~----~~~~~~~~~~l-~~~~-------~~~~- 336 (863)
.+.....--...-.++.+ -..-+|..-| |.|+|++...|...-. .....+++.++ +..+ .++.
T Consensus 216 raaA~~AdvFTTVSeITa~Ea~~LL~r~pDv-V~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv~~~f~g~~dfd~d~tl 294 (633)
T PF05693_consen 216 RAAAHYADVFTTVSEITAKEAEHLLKRKPDV-VTPNGLNVDKFPALHEFQNLHAKAKEKIHEFVRGHFYGHYDFDLDKTL 294 (633)
T ss_dssp HHHHHHSSEEEESSHHHHHHHHHHHSS--SE-E----B-GGGTSSTTHHHHHHHHHHHHHHHHHHHHSTT---S-GGGEE
T ss_pred HHHHHhcCeeeehhhhHHHHHHHHhCCCCCE-EcCCCccccccccchHHHHHHHHHHHHHHHHHHHHhcccCCCCccceE
Confidence 332211100000000000 0012333222 5799999887653210 00122333433 2232 1344
Q ss_pred EEEeecCcc-cccCHHHHHHHHHHHH---HhCCCCCCceEEEEEecCCCCCchh---------HHHHHHHHHHHHHHHhh
Q 002955 337 VMLGVDDMD-IFKGISLKLLAMEQLL---SQNPSKRGKIVLVQIANPARGRGRD---------VQEVQSETHATVRRINK 403 (863)
Q Consensus 337 vil~Vdrld-~~KGi~~~l~A~~~ll---~~~p~~~~~vvLvqi~~p~r~~~~~---------~~~~~~~v~~l~~~IN~ 403 (863)
++...||.+ ..||++..|.|+.+|- +.... +.-|+..|-.|+....-. +.++++.+.++.++|..
T Consensus 295 ~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~--~~tVVaFii~pa~~~~~~ve~l~~~a~~~~l~~t~~~i~~~~g~ 372 (633)
T PF05693_consen 295 YFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGS--DKTVVAFIIVPAKTNSFNVESLKGQAVTKQLRDTVDEIQEKIGK 372 (633)
T ss_dssp EEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT---S-EEEEEEE---SEEEE-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeeeceeeecCCccHHHHHHHHHHHHHhhcCC--CCeEEEEEEecCccCCcCHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 455589999 5799999999998873 32221 233333344455443211 12222223322222211
Q ss_pred cc------CC---------------------------------------------------------CCcccEEEEcCCC
Q 002955 404 IF------GR---------------------------------------------------------PGYQPVVLIDTPL 420 (863)
Q Consensus 404 ~~------g~---------------------------------------------------------~~~~pv~~~~~~v 420 (863)
+. |. .+-..|+|....+
T Consensus 373 ~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~irr~~L~N~~~drVKVIF~P~yL 452 (633)
T PF05693_consen 373 RLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNMIRRLGLFNNPEDRVKVIFHPEYL 452 (633)
T ss_dssp HHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHHHHHTT----TT-SEEEEE--S--
T ss_pred HHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHHHHhCCCCCCCCCceEEEEeeccc
Confidence 10 00 1233556554333
Q ss_pred C------HHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC-----
Q 002955 421 Q------FYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL----- 489 (863)
Q Consensus 421 ~------~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l----- 489 (863)
+ .-++..+.+.+|++|+||.+|+.|.+|+|++|. +.|-|.|..+|....+
T Consensus 453 ~~~dgif~l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~-------------------gVPsITTnLsGFG~~~~~~~~ 513 (633)
T PF05693_consen 453 SGTDGIFNLDYYDFVRGCDLGVFPSYYEPWGYTPLECTAF-------------------GVPSITTNLSGFGCWMQEHIE 513 (633)
T ss_dssp -TTSSSS-S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHT-------------------T--EEEETTBHHHHHHHTTS-
T ss_pred cCCCCCCCCCHHHHhccCceeeeccccccccCChHHHhhc-------------------CCceeeccchhHHHHHHHhhc
Confidence 2 336778899999999999999999999999998 5678999999966433
Q ss_pred ---CCceE-eCC--CC----HHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHH
Q 002955 490 ---SGAIR-VNP--WN----IDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFL 542 (863)
Q Consensus 490 ---~~al~-VnP--~d----~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l 542 (863)
..|+. |+= .| ++++|+.|.....++..+|.....+..+.-..-+|.+-...+.
T Consensus 514 ~~~~~GV~VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~ 576 (633)
T PF05693_consen 514 DPEEYGVYVVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYE 576 (633)
T ss_dssp HHGGGTEEEE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHH
T ss_pred cCcCCcEEEEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 13554 432 23 3567777777778887776655555444444455555444333
No 148
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.33 E-value=2.6e-06 Score=88.50 Aligned_cols=43 Identities=19% Similarity=0.232 Sum_probs=39.1
Q ss_pred cCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhh
Q 002955 754 PQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 799 (863)
Q Consensus 754 p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 799 (863)
-.+-+|..+++.+++.+ |+++++++++|||.||++||+.+|..
T Consensus 140 ~~~~~K~~~l~~~~~~~---g~~~~~~~a~gDs~nDlpml~~ag~~ 182 (212)
T COG0560 140 CDGEGKAKALRELAAEL---GIPLEETVAYGDSANDLPMLEAAGLP 182 (212)
T ss_pred cCcchHHHHHHHHHHHc---CCCHHHeEEEcCchhhHHHHHhCCCC
Confidence 34567999999999999 99999999999999999999999973
No 149
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=98.31 E-value=4.1e-07 Score=94.73 Aligned_cols=68 Identities=19% Similarity=0.217 Sum_probs=56.9
Q ss_pred CHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC------ccccceecCCHh
Q 002955 758 NKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------PSKAKYYLDDTA 831 (863)
Q Consensus 758 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~A~y~l~d~~ 831 (863)
-|...++++++++ |.+++++++|||+.+|+.+.+.+|.. +++|++|.. ...|+|++++..
T Consensus 139 p~p~~~~~~~~~~---~~~~~~~~~iGDs~~Di~aa~~aG~~-----------~i~v~~g~~~~~~l~~~~~~~~i~~~~ 204 (214)
T PRK13288 139 PDPEPVLKALELL---GAKPEEALMVGDNHHDILAGKNAGTK-----------TAGVAWTIKGREYLEQYKPDFMLDKMS 204 (214)
T ss_pred CCcHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCCe-----------EEEEcCCCCCHHHHhhcCcCEEECCHH
Confidence 4688999999999 99999999999999999999999973 467777742 235889999999
Q ss_pred HHHHHHHH
Q 002955 832 EILRMLLG 839 (863)
Q Consensus 832 eV~~~L~~ 839 (863)
++.+++..
T Consensus 205 ~l~~~i~~ 212 (214)
T PRK13288 205 DLLAIVGD 212 (214)
T ss_pred HHHHHHhh
Confidence 99887754
No 150
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=98.30 E-value=1.3e-06 Score=91.44 Aligned_cols=67 Identities=24% Similarity=0.253 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC------ccccceecCCHhH
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------PSKAKYYLDDTAE 832 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~A~y~l~d~~e 832 (863)
+...+..+++.+ |.+++++++|||+.+|+.|.+++|. ..++|++|.. ...|++++++..+
T Consensus 147 ~P~~l~~~~~~~---~~~~~~~l~VGDs~~Di~aA~~Ag~-----------~~v~v~~g~~~~~~l~~~~~d~vi~~~~e 212 (220)
T COG0546 147 DPEPLLLLLEKL---GLDPEEALMVGDSLNDILAAKAAGV-----------PAVGVTWGYNSREELAQAGADVVIDSLAE 212 (220)
T ss_pred CHHHHHHHHHHh---CCChhheEEECCCHHHHHHHHHcCC-----------CEEEEECCCCCCcchhhcCCCEEECCHHH
Confidence 567788888988 8888899999999999999999994 2478999852 3669999999999
Q ss_pred HHHHHHH
Q 002955 833 ILRMLLG 839 (863)
Q Consensus 833 V~~~L~~ 839 (863)
+...|..
T Consensus 213 l~~~l~~ 219 (220)
T COG0546 213 LLALLAE 219 (220)
T ss_pred HHHHHhc
Confidence 9887753
No 151
>PLN02645 phosphoglycolate phosphatase
Probab=98.27 E-value=2.2e-05 Score=86.65 Aligned_cols=60 Identities=22% Similarity=0.283 Sum_probs=48.1
Q ss_pred ccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceE
Q 002955 591 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGI 655 (863)
Q Consensus 591 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~l 655 (863)
++++|+||+||||+. .+ .+-+.+.++|++| ++.|..|+++|+|+......++..+..+|+
T Consensus 27 ~~~~~~~D~DGtl~~---~~-~~~~ga~e~l~~l-r~~g~~~~~~TN~~~~~~~~~~~~l~~lGi 86 (311)
T PLN02645 27 SVETFIFDCDGVIWK---GD-KLIEGVPETLDML-RSMGKKLVFVTNNSTKSRAQYGKKFESLGL 86 (311)
T ss_pred hCCEEEEeCcCCeEe---CC-ccCcCHHHHHHHH-HHCCCEEEEEeCCCCCCHHHHHHHHHHCCC
Confidence 478999999999998 34 4568889999998 888999999999997776666655444444
No 152
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.26 E-value=7.2e-06 Score=85.58 Aligned_cols=62 Identities=23% Similarity=0.347 Sum_probs=49.2
Q ss_pred CHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC---ccccceecCC--HhH
Q 002955 758 NKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK---PSKAKYYLDD--TAE 832 (863)
Q Consensus 758 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---~s~A~y~l~d--~~e 832 (863)
.|+..++.+++++ +++++++++|||+.+|++|++.+|.. +.++.. +..|+|++.+ ..+
T Consensus 152 ~k~~~~~~~~~~~---~~~~~~~i~iGDs~~Di~aa~~ag~~--------------i~~~~~~~~~~~a~~~i~~~~~~~ 214 (219)
T TIGR00338 152 YKGKTLLILLRKE---GISPENTVAVGDGANDLSMIKAAGLG--------------IAFNAKPKLQQKADICINKKDLTD 214 (219)
T ss_pred ccHHHHHHHHHHc---CCCHHHEEEEECCHHHHHHHHhCCCe--------------EEeCCCHHHHHhchhccCCCCHHH
Confidence 4899999999998 99999999999999999999999873 334432 3678898764 455
Q ss_pred HHHH
Q 002955 833 ILRM 836 (863)
Q Consensus 833 V~~~ 836 (863)
++.+
T Consensus 215 ~~~~ 218 (219)
T TIGR00338 215 ILPL 218 (219)
T ss_pred HHhh
Confidence 5544
No 153
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=98.26 E-value=2.1e-06 Score=90.54 Aligned_cols=66 Identities=17% Similarity=0.149 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC--c-----cccceecCCHh
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK--P-----SKAKYYLDDTA 831 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--~-----s~A~y~l~d~~ 831 (863)
+...+.++++++ |++++++++|||+.+|+.+.+.+|.. +++|++|.. + ..|+|.+++..
T Consensus 153 ~p~~~~~~~~~l---~~~p~~~l~IGDs~~Di~aA~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~~i~~~~ 218 (229)
T PRK13226 153 HPLPLLVAAERI---GVAPTDCVYVGDDERDILAARAAGMP-----------SVAALWGYRLHDDDPLAWQADVLVEQPQ 218 (229)
T ss_pred CHHHHHHHHHHh---CCChhhEEEeCCCHHHHHHHHHCCCc-----------EEEEeecCCCCCcChhhcCCCeeeCCHH
Confidence 567788999999 99999999999999999999999973 467888752 1 34889999999
Q ss_pred HHHHHHH
Q 002955 832 EILRMLL 838 (863)
Q Consensus 832 eV~~~L~ 838 (863)
++.+.|.
T Consensus 219 el~~~~~ 225 (229)
T PRK13226 219 LLWNPAT 225 (229)
T ss_pred HHHHHhc
Confidence 9988764
No 154
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=98.24 E-value=4e-06 Score=90.81 Aligned_cols=71 Identities=21% Similarity=0.226 Sum_probs=57.3
Q ss_pred cCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC------ccccceec
Q 002955 754 PQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------PSKAKYYL 827 (863)
Q Consensus 754 p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~A~y~l 827 (863)
+.+-.|...++.+++++ |++++++++|||+.+|+.|.+.+|.. +++|..|.. ...|.+.+
T Consensus 154 ~~~Kp~p~~~~~~~~~~---g~~~~~~l~IGD~~~Di~aA~~aGi~-----------~i~v~~G~~~~~~l~~~~~~~vi 219 (272)
T PRK13223 154 PQKKPDPAALLFVMKMA---GVPPSQSLFVGDSRSDVLAAKAAGVQ-----------CVALSYGYNHGRPIAEESPALVI 219 (272)
T ss_pred CCCCCCcHHHHHHHHHh---CCChhHEEEECCCHHHHHHHHHCCCe-----------EEEEecCCCCchhhhhcCCCEEE
Confidence 33444678899999999 99999999999999999999999873 367777731 24688999
Q ss_pred CCHhHHHHHHH
Q 002955 828 DDTAEILRMLL 838 (863)
Q Consensus 828 ~d~~eV~~~L~ 838 (863)
++..++.+++.
T Consensus 220 ~~l~el~~~~~ 230 (272)
T PRK13223 220 DDLRALLPGCA 230 (272)
T ss_pred CCHHHHHHHHh
Confidence 99999886655
No 155
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=98.16 E-value=3.8e-06 Score=87.94 Aligned_cols=66 Identities=24% Similarity=0.296 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC------ccccceecCCHhH
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------PSKAKYYLDDTAE 832 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~A~y~l~d~~e 832 (863)
|..+++.+++++ +++++++++|||+.+|+.+.+.+|.. ++.|.+|.. ...|.|++++..+
T Consensus 151 ~~~~~~~~~~~~---~~~~~~~i~igD~~~Di~~a~~~g~~-----------~i~v~~g~~~~~~~~~~~~~~~i~~~~~ 216 (226)
T PRK13222 151 DPAPLLLACEKL---GLDPEEMLFVGDSRNDIQAARAAGCP-----------SVGVTYGYNYGEPIALSEPDVVIDHFAE 216 (226)
T ss_pred ChHHHHHHHHHc---CCChhheEEECCCHHHHHHHHHCCCc-----------EEEECcCCCCccchhhcCCCEEECCHHH
Confidence 578899999999 99999999999999999999999873 356666642 2458899999999
Q ss_pred HHHHHH
Q 002955 833 ILRMLL 838 (863)
Q Consensus 833 V~~~L~ 838 (863)
+...|.
T Consensus 217 l~~~l~ 222 (226)
T PRK13222 217 LLPLLG 222 (226)
T ss_pred HHHHHH
Confidence 888764
No 156
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.15 E-value=6.5e-06 Score=82.67 Aligned_cols=41 Identities=27% Similarity=0.442 Sum_probs=36.9
Q ss_pred ecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHh
Q 002955 753 KPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVI 796 (863)
Q Consensus 753 ~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~a 796 (863)
.+.+.+|+.+++.+++.+ |++++++++|||+.||++|++.+
T Consensus 137 ~~~~~~K~~~l~~~~~~~---~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 137 NPEGECKGKVLKELLEES---KITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred cCCcchHHHHHHHHHHHh---CCCHHHEEEEeCCHHHHHHHhcC
Confidence 366789999999999887 89999999999999999999864
No 157
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=98.14 E-value=0.00018 Score=82.05 Aligned_cols=134 Identities=17% Similarity=0.136 Sum_probs=82.9
Q ss_pred CCeEE--EeecCccc-ccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCc
Q 002955 334 GQIVM--LGVDDMDI-FKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGY 410 (863)
Q Consensus 334 ~~~vi--l~Vdrld~-~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~ 410 (863)
++++| ++.+|..+ .|++...++|++.+.+++|+++ ++.++.+. .. ...++++... ++. +.
T Consensus 190 ~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~----~vi~~~~~----~~----~~~~~~~~~~----~~~-~~ 252 (385)
T TIGR00215 190 NGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLR----RVLPVVNF----KR----RLQFEQIKAE----YGP-DL 252 (385)
T ss_pred CCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeE----EEEEeCCc----hh----HHHHHHHHHH----hCC-CC
Confidence 45544 44569887 7999999999999999999876 54443221 11 1122222222 221 11
Q ss_pred ccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEec----------
Q 002955 411 QPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVS---------- 480 (863)
Q Consensus 411 ~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlS---------- 480 (863)
.|.++.+ +...+|++||++|.+| |.+.+|+++|+.| .|++
T Consensus 253 -~v~~~~~-----~~~~~l~aADl~V~~S-----Gt~tlEa~a~G~P-------------------~Vv~yk~~pl~~~~ 302 (385)
T TIGR00215 253 -QLHLIDG-----DARKAMFAADAALLAS-----GTAALEAALIKTP-------------------MVVGYRMKPLTFLI 302 (385)
T ss_pred -cEEEECc-----hHHHHHHhCCEEeecC-----CHHHHHHHHcCCC-------------------EEEEEcCCHHHHHH
Confidence 3444433 3457999999999999 6667799999554 3443
Q ss_pred -------ccccCcccCCC--c---eEeCCCCHHHHHHHHHHHhCCC
Q 002955 481 -------EFVGCSPSLSG--A---IRVNPWNIDAVAEAMDSALGVS 514 (863)
Q Consensus 481 -------e~~G~~~~l~~--a---l~VnP~d~~~~A~ai~~aL~m~ 514 (863)
.+.+.+..+.+ + ++-+-.+++.+++++.+.|+.+
T Consensus 303 ~~~~~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~~ 348 (385)
T TIGR00215 303 ARRLVKTDYISLPNILANRLLVPELLQEECTPHPLAIALLLLLENG 348 (385)
T ss_pred HHHHHcCCeeeccHHhcCCccchhhcCCCCCHHHHHHHHHHHhcCC
Confidence 14444444422 1 1223356889999999999876
No 158
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.10 E-value=2.3e-05 Score=80.35 Aligned_cols=39 Identities=26% Similarity=0.358 Sum_probs=36.3
Q ss_pred CHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhh
Q 002955 758 NKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 799 (863)
Q Consensus 758 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 799 (863)
+|+.+++.+++.+ |++++++++|||+.+|++|++.+|..
T Consensus 147 ~k~~~~~~~~~~~---~~~~~~~i~iGDs~~D~~~a~~ag~~ 185 (201)
T TIGR01491 147 NKGEAVERLKREL---NPSLTETVAVGDSKNDLPMFEVADIS 185 (201)
T ss_pred cHHHHHHHHHHHh---CCCHHHEEEEcCCHhHHHHHHhcCCe
Confidence 5999999999988 99999999999999999999999974
No 159
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=98.10 E-value=0.0013 Score=73.32 Aligned_cols=299 Identities=21% Similarity=0.290 Sum_probs=170.6
Q ss_pred HHHHHHHHHHHHhhcCCCCCEEEEeCcc----cchHHH--HHHhhCCCCeEEEEEeCC---------CCChhHhhcCCCh
Q 002955 182 VSVNKIFADKVMEVISPDDDFVWVHDYH----LMVLPT--FLRKRFNRVKLGFFLHSP---------FPSSEIYRTLPIR 246 (863)
Q Consensus 182 ~~vN~~fa~~i~~~~~p~~D~VwvhDyh----l~llp~--~lr~~~~~~~i~~flH~P---------fP~~e~~r~lp~r 246 (863)
.+.+++|+ .......|++..||+|-=- ...+|- -||+++|+.++..+.-+| |++.-...-+|..
T Consensus 32 ~r~~eRfg-~~~~~~~~~~p~vWiHaaSVGEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~~~~v~h~YlP~D 110 (419)
T COG1519 32 KRLGERFG-FYKPPVKPEGPLVWIHAASVGEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALFGDSVIHQYLPLD 110 (419)
T ss_pred HHHHHHhc-ccCCCCCCCCCeEEEEecchhHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHcCCCeEEEecCcC
Confidence 46777777 1223345667899998554 344444 489999999999988665 2222222233422
Q ss_pred HH-HHHHHH---hCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEE---------------------EEE
Q 002955 247 DE-LLRALL---NADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTV---------------------SIK 301 (863)
Q Consensus 247 ~e-il~~ll---~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~---------------------~i~ 301 (863)
.. ..+..| ..|+.-|---+.=-|++..|.+. |+. .+-.++|-. ...
T Consensus 111 ~~~~v~rFl~~~~P~l~Ii~EtElWPnli~e~~~~-~~p--------~~LvNaRLS~rS~~~y~k~~~~~~~~~~~i~li 181 (419)
T COG1519 111 LPIAVRRFLRKWRPKLLIIMETELWPNLINELKRR-GIP--------LVLVNARLSDRSFARYAKLKFLARLLFKNIDLI 181 (419)
T ss_pred chHHHHHHHHhcCCCEEEEEeccccHHHHHHHHHc-CCC--------EEEEeeeechhhhHHHHHHHHHHHHHHHhccee
Confidence 11 122222 33444444334434444444322 111 011112110 111
Q ss_pred EeccccCchHHHhhc---------------CCchHHHHHHHHHHHhCC-CeEEEeecCcccccCHH-HHHHHHHHHHHhC
Q 002955 302 ILPVGIHIGQLQSVL---------------NLPETEAKVAELQDQFKG-QIVMLGVDDMDIFKGIS-LKLLAMEQLLSQN 364 (863)
Q Consensus 302 v~p~GId~~~~~~~~---------------~~~~~~~~~~~l~~~~~~-~~vil~Vdrld~~KGi~-~~l~A~~~ll~~~ 364 (863)
+.-.-.|.++|.+.- ..|........+|.++++ +++++..+. ..|=. -.+.++..+++++
T Consensus 182 ~aQse~D~~Rf~~LGa~~v~v~GNlKfd~~~~~~~~~~~~~~r~~l~~~r~v~iaaST---H~GEeei~l~~~~~l~~~~ 258 (419)
T COG1519 182 LAQSEEDAQRFRSLGAKPVVVTGNLKFDIEPPPQLAAELAALRRQLGGHRPVWVAAST---HEGEEEIILDAHQALKKQF 258 (419)
T ss_pred eecCHHHHHHHHhcCCcceEEecceeecCCCChhhHHHHHHHHHhcCCCCceEEEecC---CCchHHHHHHHHHHHHhhC
Confidence 112223333333211 123445567778888877 889988887 33444 4678999999999
Q ss_pred CCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCC-------CcccEEEEcCCCCHHHHHHHHHhccceee
Q 002955 365 PSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRP-------GYQPVVLIDTPLQFYERIAYYVIAECCLV 437 (863)
Q Consensus 365 p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~-------~~~pv~~~~~~v~~~el~aly~~ADv~vv 437 (863)
|+.. |+ ++ | +.+ |=-+.+++++++.|-+|+.- ..++|++.+ +.-|+..||++||+++|
T Consensus 259 ~~~l----lI-lV-P---RHp---ERf~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~D---tmGEL~l~y~~adiAFV 323 (419)
T COG1519 259 PNLL----LI-LV-P---RHP---ERFKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGD---TMGELGLLYGIADIAFV 323 (419)
T ss_pred CCce----EE-Ee-c---CCh---hhHHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEe---cHhHHHHHHhhccEEEE
Confidence 9864 33 33 3 233 34567778888887666431 223455544 47799999999999877
Q ss_pred ccc---ccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEe----cccccCcccC---CCceEeCCCCHHHHHHHH
Q 002955 438 TAV---RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVV----SEFVGCSPSL---SGAIRVNPWNIDAVAEAM 507 (863)
Q Consensus 438 tS~---~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVl----Se~~G~~~~l---~~al~VnP~d~~~~A~ai 507 (863)
--. .-|-| ++|..+|. .|+|. ..|.-+.+.+ .+++.|+. .+.+++++
T Consensus 324 GGSlv~~GGHN--~LEpa~~~-------------------~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~~--~~~l~~~v 380 (419)
T COG1519 324 GGSLVPIGGHN--PLEPAAFG-------------------TPVIFGPYTFNFSDIAERLLQAGAGLQVED--ADLLAKAV 380 (419)
T ss_pred CCcccCCCCCC--hhhHHHcC-------------------CCEEeCCccccHHHHHHHHHhcCCeEEECC--HHHHHHHH
Confidence 543 34555 67999983 34554 3344444444 34677764 88888888
Q ss_pred HHHhCCCHHHHHHHHHHHhhhhccC
Q 002955 508 DSALGVSDAEKQMRHEKHYRYVSTH 532 (863)
Q Consensus 508 ~~aL~m~~~er~~r~~~~~~~v~~~ 532 (863)
...++. +++|+.+.++....+..+
T Consensus 381 ~~l~~~-~~~r~~~~~~~~~~v~~~ 404 (419)
T COG1519 381 ELLLAD-EDKREAYGRAGLEFLAQN 404 (419)
T ss_pred HHhcCC-HHHHHHHHHHHHHHHHHh
Confidence 888765 667777667777666554
No 160
>PRK06769 hypothetical protein; Validated
Probab=98.05 E-value=1.6e-05 Score=80.06 Aligned_cols=65 Identities=12% Similarity=0.148 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC------------cccccee
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------------PSKAKYY 826 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------------~s~A~y~ 826 (863)
+......+++++ |.+++++++|||+.+|+.+-+.+|.. ++.|..|.. ...|+|.
T Consensus 95 ~p~~~~~~~~~l---~~~p~~~i~IGD~~~Di~aA~~aGi~-----------~i~v~~g~~~~~~~~~~~~l~~~~~~~~ 160 (173)
T PRK06769 95 STGMLLQAAEKH---GLDLTQCAVIGDRWTDIVAAAKVNAT-----------TILVRTGAGYDALHTYRDKWAHIEPNYI 160 (173)
T ss_pred CHHHHHHHHHHc---CCCHHHeEEEcCCHHHHHHHHHCCCe-----------EEEEecCCCchhhhhhhcccccCCCcch
Confidence 456677788888 99999999999999999999999873 467777642 1347778
Q ss_pred cCCHhHHHHHH
Q 002955 827 LDDTAEILRML 837 (863)
Q Consensus 827 l~d~~eV~~~L 837 (863)
+++..++.++|
T Consensus 161 ~~~~~el~~~l 171 (173)
T PRK06769 161 AENFEDAVNWI 171 (173)
T ss_pred hhCHHHHHHHH
Confidence 88888887765
No 161
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=98.04 E-value=6.1e-06 Score=78.05 Aligned_cols=51 Identities=16% Similarity=0.296 Sum_probs=41.5
Q ss_pred ceeEecCCccccCCCC---CCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHH
Q 002955 593 RAILLDYDGTIMVPGS---ISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLA 644 (863)
Q Consensus 593 rlI~~DlDGTLl~~~~---~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~ 644 (863)
|+|++|+||||+.... ....+.++++++|+++ ++.|+.|+++|||+.....
T Consensus 2 K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l-~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDYANVAPILAVIEKLRHY-KALGFEIVISSSRNMRTYE 55 (126)
T ss_pred CEEEEeCCCCcccCCCCcccccccCHHHHHHHHHH-HHCCCEEEEECCCCchhhh
Confidence 7999999999997321 1134789999999998 7789999999999987654
No 162
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=97.99 E-value=5e-05 Score=76.98 Aligned_cols=66 Identities=17% Similarity=0.108 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC-----cccc--ceecCCHh
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK-----PSKA--KYYLDDTA 831 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~-----~s~A--~y~l~d~~ 831 (863)
+......+++++ |.+++++++|||+.+|+.+.+.+|.. ++++..|.. ...| ++++++..
T Consensus 105 ~p~~~~~~~~~l---~~~~~~~~~VgDs~~Di~~A~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~ii~~l~ 170 (181)
T PRK08942 105 KPGMLLSIAERL---NIDLAGSPMVGDSLRDLQAAAAAGVT-----------PVLVRTGKGVTTLAEGAAPGTWVLDSLA 170 (181)
T ss_pred CHHHHHHHHHHc---CCChhhEEEEeCCHHHHHHHHHCCCe-----------EEEEcCCCCchhhhcccCCCceeecCHH
Confidence 466778888888 99999999999999999999999873 356666642 2345 78888888
Q ss_pred HHHHHHH
Q 002955 832 EILRMLL 838 (863)
Q Consensus 832 eV~~~L~ 838 (863)
++.++|.
T Consensus 171 el~~~l~ 177 (181)
T PRK08942 171 DLPQALK 177 (181)
T ss_pred HHHHHHH
Confidence 8877664
No 163
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=97.89 E-value=0.00014 Score=76.16 Aligned_cols=72 Identities=19% Similarity=0.159 Sum_probs=47.9
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCCccccceecCCHhHHHH
Q 002955 756 GVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILR 835 (863)
Q Consensus 756 gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~A~y~l~d~~eV~~ 835 (863)
+..|..+++. + +..++++++|||+.||+.|.+.+|..++.+.+ ...-.....+.+.+++..+|..
T Consensus 146 ~~~K~~~l~~----~---~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~~l--------~~~~~~~~~~~~~~~~f~ei~~ 210 (219)
T PRK09552 146 GCCKPSLIRK----L---SDTNDFHIVIGDSITDLEAAKQADKVFARDFL--------ITKCEELGIPYTPFETFHDVQT 210 (219)
T ss_pred CCchHHHHHH----h---ccCCCCEEEEeCCHHHHHHHHHCCcceeHHHH--------HHHHHHcCCCccccCCHHHHHH
Confidence 3457766554 4 66778999999999999999999874321000 0000123445566789999999
Q ss_pred HHHHHHH
Q 002955 836 MLLGLAE 842 (863)
Q Consensus 836 ~L~~L~~ 842 (863)
.|+.+-+
T Consensus 211 ~l~~~~~ 217 (219)
T PRK09552 211 ELKHLLE 217 (219)
T ss_pred HHHHHhc
Confidence 9887754
No 164
>PLN02954 phosphoserine phosphatase
Probab=97.88 E-value=1.8e-05 Score=82.83 Aligned_cols=66 Identities=20% Similarity=0.300 Sum_probs=49.2
Q ss_pred CCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC------ccccceecC
Q 002955 755 QGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------PSKAKYYLD 828 (863)
Q Consensus 755 ~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~A~y~l~ 828 (863)
.+.+|..+++.+++++ |. +++++|||+.||+.|.+.++.. +.+++|.. ...|+|+++
T Consensus 152 ~~~~K~~~i~~~~~~~---~~--~~~i~iGDs~~Di~aa~~~~~~------------~~~~~~~~~~~~~~~~~~~~~i~ 214 (224)
T PLN02954 152 RSGGKAEAVQHIKKKH---GY--KTMVMIGDGATDLEARKPGGAD------------LFIGYGGVQVREAVAAKADWFVT 214 (224)
T ss_pred CCccHHHHHHHHHHHc---CC--CceEEEeCCHHHHHhhhcCCCC------------EEEecCCCccCHHHHhcCCEEEC
Confidence 3456999999998877 64 6899999999999997765542 33445531 235889999
Q ss_pred CHhHHHHHH
Q 002955 829 DTAEILRML 837 (863)
Q Consensus 829 d~~eV~~~L 837 (863)
+..++.++|
T Consensus 215 ~~~el~~~~ 223 (224)
T PLN02954 215 DFQDLIEVL 223 (224)
T ss_pred CHHHHHHhh
Confidence 999887764
No 165
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=97.86 E-value=2.6e-05 Score=83.27 Aligned_cols=71 Identities=18% Similarity=0.250 Sum_probs=54.6
Q ss_pred ccceeEecCCccccCCCCCCCCC---CHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc--CC-ceEEccCcEEEE
Q 002955 591 KNRAILLDYDGTIMVPGSISTSP---NAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC--EG-LGIAAEHGYFVR 664 (863)
Q Consensus 591 ~~rlI~~DlDGTLl~~~~~~~~~---s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l--~~-l~liaenGa~I~ 664 (863)
..++|+|||||||++ ..+.+ ++.+.++|.+| ++.|+.++|+|++++..+...+..+ .. ...+..+|....
T Consensus 125 ~~kvIvFDLDgTLi~---~~~~v~irdPgV~EaL~~L-kekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~ 200 (301)
T TIGR01684 125 PPHVVVFDLDSTLIT---DEEPVRIRDPRIYDSLTEL-KKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAE 200 (301)
T ss_pred cceEEEEecCCCCcC---CCCccccCCHHHHHHHHHH-HHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCcccc
Confidence 358999999999999 45554 69999999999 8899999999999999888887654 11 234445555543
Q ss_pred e
Q 002955 665 P 665 (863)
Q Consensus 665 ~ 665 (863)
.
T Consensus 201 ~ 201 (301)
T TIGR01684 201 E 201 (301)
T ss_pred C
Confidence 3
No 166
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.83 E-value=8e-05 Score=78.01 Aligned_cols=62 Identities=11% Similarity=0.050 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC-----ccccceecCCHhHH
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK-----PSKAKYYLDDTAEI 833 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~-----~s~A~y~l~d~~eV 833 (863)
+...++.+++++ |++++++++|||+.+|+++.+.+|.. ++.+.-+.. ...|++++.+..++
T Consensus 150 ~~~~~~~~~~~~---~~~~~~~~~igDs~~Di~aA~~aG~~-----------~i~v~~~~~~~~~~~~~~~~~~~~~~dl 215 (222)
T PRK10826 150 HPEVYLNCAAKL---GVDPLTCVALEDSFNGMIAAKAARMR-----------SIVVPAPEQQNDPRWALADVKLESLTEL 215 (222)
T ss_pred CHHHHHHHHHHc---CCCHHHeEEEcCChhhHHHHHHcCCE-----------EEEecCCccCchhhhhhhheeccCHHHH
Confidence 567889999999 99999999999999999999999973 234433321 13577778877776
Q ss_pred H
Q 002955 834 L 834 (863)
Q Consensus 834 ~ 834 (863)
.
T Consensus 216 ~ 216 (222)
T PRK10826 216 T 216 (222)
T ss_pred h
Confidence 4
No 167
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.80 E-value=1.2e-05 Score=83.46 Aligned_cols=64 Identities=17% Similarity=0.191 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC------ccccceecCCHhH
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------PSKAKYYLDDTAE 832 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~A~y~l~d~~e 832 (863)
+...+.++++++ |++++++++|||+.+|+.+.+.+|.. +++|..|.. ...|+|++++..+
T Consensus 143 ~p~~~~~~~~~~---~~~~~~~~~igDs~~d~~aa~~aG~~-----------~i~v~~g~~~~~~l~~~~a~~~i~~~~~ 208 (213)
T TIGR01449 143 HPDPLLLAAERL---GVAPQQMVYVGDSRVDIQAARAAGCP-----------SVLLTYGYRYGEAIDLLPPDVLYDSLNE 208 (213)
T ss_pred ChHHHHHHHHHc---CCChhHeEEeCCCHHHHHHHHHCCCe-----------EEEEccCCCCCcchhhcCCCeEeCCHHH
Confidence 467889999999 99999999999999999999999973 356666632 2468899999988
Q ss_pred HHHH
Q 002955 833 ILRM 836 (863)
Q Consensus 833 V~~~ 836 (863)
+..+
T Consensus 209 l~~~ 212 (213)
T TIGR01449 209 LPPL 212 (213)
T ss_pred HHhh
Confidence 7654
No 168
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=97.77 E-value=3.7e-05 Score=68.68 Aligned_cols=87 Identities=21% Similarity=0.270 Sum_probs=69.0
Q ss_pred ceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC-C--ceEeCCCCHHHHHHHHHHH
Q 002955 434 CCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS-G--AIRVNPWNIDAVAEAMDSA 510 (863)
Q Consensus 434 v~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~-~--al~VnP~d~~~~A~ai~~a 510 (863)
+++.|+..+|+++..+|+||| |+++|.+...+....+. + ++.++ |++++++++..+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~-------------------G~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~l 59 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMAC-------------------GTPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYL 59 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHC-------------------CCeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHH
Confidence 467788889999999999999 55666666667777773 3 67777 999999999999
Q ss_pred hCCCHHHHHHHHHHHhhhhc-cCCHHHHHHHHH
Q 002955 511 LGVSDAEKQMRHEKHYRYVS-THDVAYWARSFL 542 (863)
Q Consensus 511 L~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~l 542 (863)
++.| ++++...++.+++|. .|++..-++.|+
T Consensus 60 l~~~-~~~~~ia~~a~~~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 60 LENP-EERRRIAKNARERVLKRHTWEHRAEQIL 91 (92)
T ss_pred HCCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 9854 566666777777776 688888777775
No 169
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=97.75 E-value=0.00011 Score=70.14 Aligned_cols=46 Identities=22% Similarity=0.303 Sum_probs=37.0
Q ss_pred ceeEecCCccccCCC-----CCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCC
Q 002955 593 RAILLDYDGTIMVPG-----SISTSPNAEAVAILDNLCRDPKNVVFLVSGKD 639 (863)
Q Consensus 593 rlI~~DlDGTLl~~~-----~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~ 639 (863)
|+++||+||||++.. .....+.+.+.++|+.| ++.|+.++|+|+++
T Consensus 1 k~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L-~~~g~~l~i~Sn~~ 51 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAEL-KEAGYKVVIVTNQS 51 (132)
T ss_pred CEEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHH-HHCCCEEEEEECCc
Confidence 689999999999521 01235678899999998 78899999999986
No 170
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=97.72 E-value=0.00024 Score=71.67 Aligned_cols=63 Identities=14% Similarity=0.098 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC-----ccccceecCCHhHH
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK-----PSKAKYYLDDTAEI 833 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~-----~s~A~y~l~d~~eV 833 (863)
+...+...++++ |++++++++|||+.+|+..-+.+|... ++.|..|.. ...|++++++..++
T Consensus 108 ~p~~~~~a~~~~---~~~~~~~v~VGDs~~Di~aA~~aG~~~----------~i~v~~g~~~~~~~~~~ad~~i~~~~el 174 (176)
T TIGR00213 108 KPGMLLQARKEL---HIDMAQSYMVGDKLEDMQAGVAAKVKT----------NVLVRTGKPITPEAENIADWVLNSLADL 174 (176)
T ss_pred CHHHHHHHHHHc---CcChhhEEEEcCCHHHHHHHHHCCCcE----------EEEEecCCcccccccccCCEEeccHHHh
Confidence 566778888888 999999999999999999999999731 145666742 23488999988877
Q ss_pred H
Q 002955 834 L 834 (863)
Q Consensus 834 ~ 834 (863)
.
T Consensus 175 ~ 175 (176)
T TIGR00213 175 P 175 (176)
T ss_pred h
Confidence 5
No 171
>PRK11587 putative phosphatase; Provisional
Probab=97.71 E-value=5.2e-05 Score=79.21 Aligned_cols=61 Identities=10% Similarity=0.046 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC---ccccceecCCHhHH
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK---PSKAKYYLDDTAEI 833 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---~s~A~y~l~d~~eV 833 (863)
+.......++++ |++|+++++|||+.+|+.+-+.+|.. +++|..|.. ...|++++++..++
T Consensus 140 ~p~~~~~~~~~~---g~~p~~~l~igDs~~di~aA~~aG~~-----------~i~v~~~~~~~~~~~~~~~~~~~~el 203 (218)
T PRK11587 140 EPDAYLLGAQLL---GLAPQECVVVEDAPAGVLSGLAAGCH-----------VIAVNAPADTPRLDEVDLVLHSLEQL 203 (218)
T ss_pred CcHHHHHHHHHc---CCCcccEEEEecchhhhHHHHHCCCE-----------EEEECCCCchhhhccCCEEecchhhe
Confidence 467778888888 99999999999999999999999863 345554432 24577888877765
No 172
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=97.67 E-value=0.00018 Score=75.11 Aligned_cols=66 Identities=20% Similarity=0.178 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHhhcCCC-cceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC------ccccceecCCHh
Q 002955 759 KGLVAQHQLETMHQKGML-PDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------PSKAKYYLDDTA 831 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~-~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~A~y~l~d~~ 831 (863)
+...+..+++++ |+. ++++++|||+.+|+.+-+.+|... ++++..|.. ...|.+++++..
T Consensus 147 ~p~~~~~a~~~~---~~~~~~~~~~igD~~~Di~aa~~aG~~~----------~i~~~~g~~~~~~~~~~~~~~~i~~~~ 213 (220)
T TIGR03351 147 APDLILRAMELT---GVQDVQSVAVAGDTPNDLEAGINAGAGA----------VVGVLTGAHDAEELSRHPHTHVLDSVA 213 (220)
T ss_pred CHHHHHHHHHHc---CCCChhHeEEeCCCHHHHHHHHHCCCCe----------EEEEecCCCcHHHHhhcCCceeecCHH
Confidence 678899999998 987 799999999999999999999841 145666632 245788888888
Q ss_pred HHHHHH
Q 002955 832 EILRML 837 (863)
Q Consensus 832 eV~~~L 837 (863)
++..++
T Consensus 214 ~l~~~~ 219 (220)
T TIGR03351 214 DLPALL 219 (220)
T ss_pred HHHHhh
Confidence 877654
No 173
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=97.67 E-value=0.00051 Score=74.13 Aligned_cols=70 Identities=10% Similarity=0.089 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHhhcCCC-cceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC------------------
Q 002955 759 KGLVAQHQLETMHQKGML-PDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------------------ 819 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~-~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------------------ 819 (863)
+...+..+++++ |+. ++++++|||+.+|+.+-+.+|.. +++|+.|..
T Consensus 160 ~p~~~~~a~~~l---~~~~~~e~l~IGDs~~Di~aA~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~~~~~~ 225 (267)
T PRK13478 160 YPWMALKNAIEL---GVYDVAACVKVDDTVPGIEEGLNAGMW-----------TVGVILSGNELGLSEEEYQALSAAELA 225 (267)
T ss_pred ChHHHHHHHHHc---CCCCCcceEEEcCcHHHHHHHHHCCCE-----------EEEEccCcccccCCHHHHHhcCHHHHH
Confidence 467788888888 985 69999999999999999999873 467777742
Q ss_pred -----------ccccceecCCHhHHHHHHHHHHH
Q 002955 820 -----------PSKAKYYLDDTAEILRMLLGLAE 842 (863)
Q Consensus 820 -----------~s~A~y~l~d~~eV~~~L~~L~~ 842 (863)
...|++++++..++...|+.+..
T Consensus 226 ~~~~~~~~~l~~~~a~~vi~~~~~l~~~l~~~~~ 259 (267)
T PRK13478 226 ARRERARARLRAAGAHYVIDTIADLPAVIADIEA 259 (267)
T ss_pred HHHHHHHHHHHHcCCCeehhhHHHHHHHHHHHHH
Confidence 24588999999999888876544
No 174
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=97.63 E-value=0.00012 Score=78.09 Aligned_cols=60 Identities=15% Similarity=0.111 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC-----ccccceecCCHhH
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK-----PSKAKYYLDDTAE 832 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~-----~s~A~y~l~d~~e 832 (863)
+.....++++++ |++++++++|||+.+|+.+-+.+|.. +++|.+|.. ...|+|++++..+
T Consensus 166 ~p~~~~~a~~~~---~~~~~~~l~vgDs~~Di~aA~~aGi~-----------~i~v~~g~~~~~l~~~~a~~vi~~~~e 230 (248)
T PLN02770 166 HPDPYLKALEVL---KVSKDHTFVFEDSVSGIKAGVAAGMP-----------VVGLTTRNPESLLMEAKPTFLIKDYED 230 (248)
T ss_pred ChHHHHHHHHHh---CCChhHEEEEcCCHHHHHHHHHCCCE-----------EEEEeCCCCHHHHhhcCCCEEeccchh
Confidence 567888899998 99999999999999999999999873 467777642 3468899998887
No 175
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=97.61 E-value=0.00041 Score=79.86 Aligned_cols=132 Identities=11% Similarity=0.088 Sum_probs=95.3
Q ss_pred hCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcc
Q 002955 332 FKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQ 411 (863)
Q Consensus 332 ~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~ 411 (863)
+.++.++++ + ...++|++++.++.|++. |=+ |.++ ++...+.++ + +| .
T Consensus 281 ~~~~~l~~t-----~----s~~I~~i~~Lv~~lPd~~----f~I-ga~t--------e~s~kL~~L-~----~y-----~ 328 (438)
T TIGR02919 281 YRKQALILT-----N----SDQIEHLEEIVQALPDYH----FHI-AALT--------EMSSKLMSL-D----KY-----D 328 (438)
T ss_pred CcccEEEEC-----C----HHHHHHHHHHHHhCCCcE----EEE-EecC--------cccHHHHHH-H----hc-----C
Confidence 345556655 1 899999999999999987 543 5443 122333333 1 22 3
Q ss_pred cEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEeccc-ccCcccCC
Q 002955 412 PVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEF-VGCSPSLS 490 (863)
Q Consensus 412 pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~-~G~~~~l~ 490 (863)
.++.+.+ +....+..+|..||+++.+|..||++++..||+..+ -|++.=+. .|..+.+.
T Consensus 329 nvvly~~-~~~~~l~~ly~~~dlyLdin~~e~~~~al~eA~~~G-------------------~pI~afd~t~~~~~~i~ 388 (438)
T TIGR02919 329 NVKLYPN-ITTQKIQELYQTCDIYLDINHGNEILNAVRRAFEYN-------------------LLILGFEETAHNRDFIA 388 (438)
T ss_pred CcEEECC-cChHHHHHHHHhccEEEEccccccHHHHHHHHHHcC-------------------CcEEEEecccCCccccc
Confidence 4566665 445678899999999999999999999999999962 23443333 34555556
Q ss_pred CceEeCCCCHHHHHHHHHHHhCCCH
Q 002955 491 GAIRVNPWNIDAVAEAMDSALGVSD 515 (863)
Q Consensus 491 ~al~VnP~d~~~~A~ai~~aL~m~~ 515 (863)
++.++++.|+++++++|.++|+.+.
T Consensus 389 ~g~l~~~~~~~~m~~~i~~lL~d~~ 413 (438)
T TIGR02919 389 SENIFEHNEVDQLISKLKDLLNDPN 413 (438)
T ss_pred CCceecCCCHHHHHHHHHHHhcCHH
Confidence 6889999999999999999998773
No 176
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=97.57 E-value=0.00012 Score=82.17 Aligned_cols=72 Identities=11% Similarity=0.140 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC---ccccceecCCHhHH-H
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK---PSKAKYYLDDTAEI-L 834 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---~s~A~y~l~d~~eV-~ 834 (863)
+.......++.+ |+.++++++|||+.+|+.+-+.+|.. +++|+.+.. ...|++++++.+++ +
T Consensus 274 ~Peifl~A~~~l---gl~Peecl~IGDS~~DIeAAk~AGm~-----------~IgV~~~~~~~~l~~Ad~iI~s~~EL~~ 339 (381)
T PLN02575 274 DPEMFIYAAQLL---NFIPERCIVFGNSNQTVEAAHDARMK-----------CVAVASKHPIYELGAADLVVRRLDELSI 339 (381)
T ss_pred CHHHHHHHHHHc---CCCcccEEEEcCCHHHHHHHHHcCCE-----------EEEECCCCChhHhcCCCEEECCHHHHHH
Confidence 577888899998 99999999999999999999999873 355654431 24588999999998 5
Q ss_pred HHHHHHHHhh
Q 002955 835 RMLLGLAEAS 844 (863)
Q Consensus 835 ~~L~~L~~~~ 844 (863)
..|+.|...-
T Consensus 340 ~~l~~l~~~~ 349 (381)
T PLN02575 340 VDLKNLADIE 349 (381)
T ss_pred HHHhhhhhcC
Confidence 7778887754
No 177
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=97.57 E-value=0.00011 Score=80.08 Aligned_cols=62 Identities=13% Similarity=0.061 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC----ccccceecCCHhHHH
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLDDTAEIL 834 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~d~~eV~ 834 (863)
+...+..+++++ |++++++++|||+.+|+.+-+.+|.. +++|..|.. -..|++++++..++.
T Consensus 204 ~p~~~~~a~~~~---~~~p~~~l~IGDs~~Di~aA~~aG~~-----------~i~v~~g~~~~~~l~~ad~vi~~~~~l~ 269 (286)
T PLN02779 204 DPDIYNLAAETL---GVDPSRCVVVEDSVIGLQAAKAAGMR-----------CIVTKSSYTADEDFSGADAVFDCLGDVP 269 (286)
T ss_pred CHHHHHHHHHHh---CcChHHEEEEeCCHHhHHHHHHcCCE-----------EEEEccCCccccccCCCcEEECChhhcc
Confidence 466888899999 99999999999999999999999973 356666632 145888888887754
No 178
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=97.51 E-value=0.00021 Score=71.39 Aligned_cols=50 Identities=20% Similarity=0.290 Sum_probs=38.0
Q ss_pred hcccceeEecCCccccCCCCCCCC---------CCHHHHHHHHHhhcCCCCeEEEEcCCC
Q 002955 589 RTKNRAILLDYDGTIMVPGSISTS---------PNAEAVAILDNLCRDPKNVVFLVSGKD 639 (863)
Q Consensus 589 ~s~~rlI~~DlDGTLl~~~~~~~~---------~s~~~~~aL~~L~~d~g~~V~I~TGR~ 639 (863)
.|+.|++++|+||||+...+.... +-+.+.++|++| ++.|+.++|+|..+
T Consensus 10 ~~~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L-k~~G~~l~I~TN~~ 68 (166)
T TIGR01664 10 KPQSKVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQEL-DDEGYKIVIFTNQS 68 (166)
T ss_pred CCcCcEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHH-HHCCCEEEEEeCCc
Confidence 466899999999999973211111 236789999998 88899999999854
No 179
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=97.50 E-value=0.00018 Score=77.02 Aligned_cols=55 Identities=20% Similarity=0.273 Sum_probs=47.9
Q ss_pred cceeEecCCccccCCCCCCCCC---CHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc
Q 002955 592 NRAILLDYDGTIMVPGSISTSP---NAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~~~~~~~---s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l 650 (863)
.++|+||+||||++ ..+.+ ++.+.++|.+| ++.|+.++|+|+.+...+...+..+
T Consensus 128 ~~~i~~D~D~TL~~---~~~~v~irdp~V~EtL~eL-kekGikLaIvTNg~Re~v~~~Le~l 185 (303)
T PHA03398 128 PHVIVFDLDSTLIT---DEEPVRIRDPFVYDSLDEL-KERGCVLVLWSYGNREHVVHSLKET 185 (303)
T ss_pred ccEEEEecCCCccC---CCCccccCChhHHHHHHHH-HHCCCEEEEEcCCChHHHHHHHHHc
Confidence 58999999999999 56666 79999999999 8899999999988888877777654
No 180
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=97.43 E-value=0.00031 Score=75.53 Aligned_cols=69 Identities=14% Similarity=0.201 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC----ccccceecCCHhHHH
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLDDTAEIL 834 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~d~~eV~ 834 (863)
+......+++++ |++++++++|||+.+|+.+-+.+|.. +++|. |.. -..|++++++..++.
T Consensus 167 ~Pe~~~~a~~~l---~~~p~~~l~IgDs~~Di~aA~~aG~~-----------~i~v~-g~~~~~~l~~ad~vi~~~~el~ 231 (260)
T PLN03243 167 DPEMFMYAAERL---GFIPERCIVFGNSNSSVEAAHDGCMK-----------CVAVA-GKHPVYELSAGDLVVRRLDDLS 231 (260)
T ss_pred CHHHHHHHHHHh---CCChHHeEEEcCCHHHHHHHHHcCCE-----------EEEEe-cCCchhhhccCCEEeCCHHHHH
Confidence 467888899999 99999999999999999999999973 34554 432 246888999998866
Q ss_pred HH-HHHHHH
Q 002955 835 RM-LLGLAE 842 (863)
Q Consensus 835 ~~-L~~L~~ 842 (863)
.. +..+++
T Consensus 232 ~~~~~~~~~ 240 (260)
T PLN03243 232 VVDLKNLSD 240 (260)
T ss_pred HHHHhhhhc
Confidence 44 334443
No 181
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=97.40 E-value=0.0013 Score=72.09 Aligned_cols=56 Identities=23% Similarity=0.388 Sum_probs=45.9
Q ss_pred cceeEecCCccccCCCCC---------CCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhh
Q 002955 592 NRAILLDYDGTIMVPGSI---------STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFS 648 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~~~---------~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~ 648 (863)
.+++++|+||||...... +..+.+.+.+.|++| ++.|+.++++|||+....+..+.
T Consensus 158 ~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~g~~i~i~T~r~~~~~~~~l~ 222 (300)
T PHA02530 158 PKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMY-KAAGYEIIVVSGRDGVCEEDTVE 222 (300)
T ss_pred CCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHH-HhCCCEEEEEeCCChhhHHHHHH
Confidence 579999999999973211 346789999999999 77899999999999888776664
No 182
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=97.38 E-value=0.0006 Score=79.55 Aligned_cols=67 Identities=19% Similarity=0.179 Sum_probs=50.9
Q ss_pred CHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC----ccccceecCCHhHH
Q 002955 758 NKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLDDTAEI 833 (863)
Q Consensus 758 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~d~~eV 833 (863)
.|...+...++++ +++++++|||+.+|+.+.+.+|.. +++|..|.. ...|+|.+++..++
T Consensus 386 ~kP~~~~~al~~l-----~~~~~v~VGDs~~Di~aAk~AG~~-----------~I~v~~~~~~~~~~~~~d~~i~~l~el 449 (459)
T PRK06698 386 NKSDLVKSILNKY-----DIKEAAVVGDRLSDINAAKDNGLI-----------AIGCNFDFAQEDELAQADIVIDDLLEL 449 (459)
T ss_pred CCcHHHHHHHHhc-----CcceEEEEeCCHHHHHHHHHCCCe-----------EEEEeCCCCcccccCCCCEEeCCHHHH
Confidence 3666777777654 468999999999999999999973 356666532 24688999999998
Q ss_pred HHHHHHH
Q 002955 834 LRMLLGL 840 (863)
Q Consensus 834 ~~~L~~L 840 (863)
..+|..+
T Consensus 450 ~~~l~~~ 456 (459)
T PRK06698 450 KGILSTV 456 (459)
T ss_pred HHHHHHH
Confidence 8877543
No 183
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=97.38 E-value=0.00059 Score=66.74 Aligned_cols=37 Identities=19% Similarity=0.138 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhh
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 798 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 798 (863)
|...++.+++.+ |++++++++|||+..|+.+.+.+|.
T Consensus 103 ~~~~~~~~~~~~---~~~~~e~i~IGDs~~Di~~A~~~Gi 139 (147)
T TIGR01656 103 KPGLILEALKRL---GVDASRSLVVGDRLRDLQAARNAGL 139 (147)
T ss_pred CHHHHHHHHHHc---CCChHHEEEEcCCHHHHHHHHHCCC
Confidence 677888889988 9999999999999999999999987
No 184
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=97.36 E-value=0.0026 Score=63.83 Aligned_cols=58 Identities=21% Similarity=0.389 Sum_probs=45.4
Q ss_pred cccCCHHHHHHHHHhcccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCC
Q 002955 575 FRKLSIDHIVSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKD 639 (863)
Q Consensus 575 f~~l~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~ 639 (863)
+..++.+.+ ++...+++++|+||||+.. ....+.+.+.++|++| ++.|..++|+|+.+
T Consensus 12 ~~~i~~~~~----~~~~v~~vv~D~Dgtl~~~--~~~~~~pgv~e~L~~L-k~~g~~l~I~Sn~~ 69 (170)
T TIGR01668 12 LNDLTIDLL----KKVGIKGVVLDKDNTLVYP--DHNEAYPALRDWIEEL-KAAGRKLLIVSNNA 69 (170)
T ss_pred hhhCCHHHH----HHCCCCEEEEecCCccccC--CCCCcChhHHHHHHHH-HHcCCEEEEEeCCc
Confidence 334555544 3457899999999999984 2336788999999998 88899999999987
No 185
>PHA02597 30.2 hypothetical protein; Provisional
Probab=97.32 E-value=0.00034 Score=71.77 Aligned_cols=60 Identities=17% Similarity=0.106 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHh--hhhcCCCCCCCCcceEEEEeCCCc--cccceecCCHhHHH
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVI--KSAAAGPSLSPVAEVFACTVGQKP--SKAKYYLDDTAEIL 834 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~a--g~~~~~~~~~~~~~~~av~vG~~~--s~A~y~l~d~~eV~ 834 (863)
|...+..+++++ | ++.+++|||+.+|+..-+.+ |.. ++.+.+|..+ -.+.|.+++..++.
T Consensus 132 kp~~~~~a~~~~---~--~~~~v~vgDs~~di~aA~~a~~Gi~-----------~i~~~~~~~~~~~~~~~~~~~~~~~~ 195 (197)
T PHA02597 132 KEKLFIKAKEKY---G--DRVVCFVDDLAHNLDAAHEALSQLP-----------VIHMLRGERDHIPKLAHRVKSWNDIE 195 (197)
T ss_pred cHHHHHHHHHHh---C--CCcEEEeCCCHHHHHHHHHHHcCCc-----------EEEecchhhccccchhhhhccHHHHh
Confidence 678889999988 7 78899999999999999998 873 4677777632 25568788777654
No 186
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=97.29 E-value=0.0011 Score=65.95 Aligned_cols=38 Identities=18% Similarity=0.089 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhh
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 799 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 799 (863)
|...++.+++++ +++++++++|||+.+|+.+.+.+|..
T Consensus 105 ~~~~~~~~~~~~---~~~~~e~l~IGD~~~Di~~A~~aGi~ 142 (161)
T TIGR01261 105 KIKLLEPYLKKN---LIDKARSYVIGDRETDMQLAENLGIR 142 (161)
T ss_pred CHHHHHHHHHHc---CCCHHHeEEEeCCHHHHHHHHHCCCe
Confidence 677888888888 99999999999999999999999873
No 187
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=97.28 E-value=0.00066 Score=71.34 Aligned_cols=70 Identities=16% Similarity=0.072 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC--ccccceecCCHhHHHHH
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK--PSKAKYYLDDTAEILRM 836 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--~s~A~y~l~d~~eV~~~ 836 (863)
+....+++++++ |++++++++|||+.+|+..-+.+|... +++|+.+.. ...|.....+.+++.++
T Consensus 151 ~p~~~~~~~~~~---~~~p~~~l~igDs~~di~aA~~aG~~~----------~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 217 (224)
T PRK14988 151 DQRLWQAVAEHT---GLKAERTLFIDDSEPILDAAAQFGIRY----------CLGVTNPDSGIAEKQYQRHPSLNDYRRL 217 (224)
T ss_pred CHHHHHHHHHHc---CCChHHEEEEcCCHHHHHHHHHcCCeE----------EEEEeCCCCCccchhccCCCcHHHHHHH
Confidence 467888899999 999999999999999999999998731 245555542 24444556677777777
Q ss_pred HHHHH
Q 002955 837 LLGLA 841 (863)
Q Consensus 837 L~~L~ 841 (863)
|+.|.
T Consensus 218 ~~~l~ 222 (224)
T PRK14988 218 IPSLM 222 (224)
T ss_pred hhhhc
Confidence 77653
No 188
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=97.21 E-value=0.00089 Score=69.82 Aligned_cols=61 Identities=15% Similarity=0.217 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCc-chHHHHHHhhhhcCCCCCCCCcceEEEEeCCCc-------cccceecCCH
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDR-SDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKP-------SKAKYYLDDT 830 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~-------s~A~y~l~d~ 830 (863)
+....+.+++++ |++++++++|||+. +|+.+-+.+|.. ++.+..|... ..+.|++++.
T Consensus 152 ~~~~~~~~~~~~---~~~~~~~~~igDs~~~di~~A~~aG~~-----------~i~~~~~~~~~~~~~~~~~~~~~i~~~ 217 (221)
T TIGR02253 152 HPKIFYAALKRL---GVKPEEAVMVGDRLDKDIKGAKNLGMK-----------TVWINQGKSSKMEDDVYPYPDYEISSL 217 (221)
T ss_pred CHHHHHHHHHHc---CCChhhEEEECCChHHHHHHHHHCCCE-----------EEEECCCCCcccccccccCCCeeeCcH
Confidence 456888899998 99999999999997 999999999873 2344444321 2456777776
Q ss_pred hHH
Q 002955 831 AEI 833 (863)
Q Consensus 831 ~eV 833 (863)
.++
T Consensus 218 ~el 220 (221)
T TIGR02253 218 REL 220 (221)
T ss_pred Hhh
Confidence 654
No 189
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=97.19 E-value=0.0014 Score=66.14 Aligned_cols=42 Identities=24% Similarity=0.234 Sum_probs=33.9
Q ss_pred ecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhc
Q 002955 753 KPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAA 800 (863)
Q Consensus 753 ~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~ 800 (863)
.+.|..|+..++.+.+.. ++.+++|||+.||+.|.+.++..+
T Consensus 144 ~~~g~~K~~~~~~~~~~~------~~~~i~iGD~~~D~~aa~~~d~~~ 185 (188)
T TIGR01489 144 CPCGCCKGKVIHKLSEPK------YQHIIYIGDGVTDVCPAKLSDVVF 185 (188)
T ss_pred CCCCCCHHHHHHHHHhhc------CceEEEECCCcchhchHhcCCccc
Confidence 345678988888887642 688999999999999999987643
No 190
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=97.11 E-value=0.0013 Score=70.35 Aligned_cols=49 Identities=18% Similarity=0.308 Sum_probs=40.3
Q ss_pred ccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHH
Q 002955 591 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLA 644 (863)
Q Consensus 591 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~ 644 (863)
+++.++||+||||.. ...+-+.+.++|++| ++.|.+++++|-.+...-+
T Consensus 7 ~y~~~l~DlDGvl~~----G~~~ipga~e~l~~L-~~~g~~~iflTNn~~~s~~ 55 (269)
T COG0647 7 KYDGFLFDLDGVLYR----GNEAIPGAAEALKRL-KAAGKPVIFLTNNSTRSRE 55 (269)
T ss_pred hcCEEEEcCcCceEe----CCccCchHHHHHHHH-HHcCCeEEEEeCCCCCCHH
Confidence 357899999999997 567778999999999 8899999999765544433
No 191
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=97.07 E-value=0.0062 Score=61.43 Aligned_cols=37 Identities=14% Similarity=0.165 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhh
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 798 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 798 (863)
+....+++++++ +++++++++|||+.+|+.+.+.+|.
T Consensus 143 ~p~~~~~~~~~~---~~~~~~~v~vgD~~~di~aA~~aG~ 179 (185)
T TIGR01990 143 DPEIFLAAAEGL---GVSPSECIGIEDAQAGIEAIKAAGM 179 (185)
T ss_pred ChHHHHHHHHHc---CCCHHHeEEEecCHHHHHHHHHcCC
Confidence 577888889988 9999999999999999999999987
No 192
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=96.97 E-value=0.0012 Score=62.93 Aligned_cols=55 Identities=20% Similarity=0.236 Sum_probs=42.4
Q ss_pred ceeEecCCccccCCCC--CCC-------CCCHHHHHHHHHhhcCCCCeEEEEcCC-ChhhHHHHhh
Q 002955 593 RAILLDYDGTIMVPGS--IST-------SPNAEAVAILDNLCRDPKNVVFLVSGK-DRDTLAEWFS 648 (863)
Q Consensus 593 rlI~~DlDGTLl~~~~--~~~-------~~s~~~~~aL~~L~~d~g~~V~I~TGR-~~~~l~~~~~ 648 (863)
|+|++|+||||++... ... .+-+.+.+.|+.| ++.|+.++|+|++ ........+.
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~L-k~~g~~l~i~Sn~~~~~~~~~~l~ 65 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTL-KKNGFLLALASYNDDPHVAYELLK 65 (128)
T ss_pred CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHH-HHCCeEEEEEeCCCCHHHHHHHHH
Confidence 6899999999998410 111 2467999999998 7889999999999 6666656553
No 193
>PLN02940 riboflavin kinase
Probab=96.94 E-value=0.0011 Score=75.32 Aligned_cols=62 Identities=15% Similarity=0.047 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC----ccccceecCCHhHHH
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLDDTAEIL 834 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~d~~eV~ 834 (863)
+......+++++ |++++++++|||+.+|+.+.+.+|.. +++|+.|.. ...|++.+++..++.
T Consensus 152 ~p~~~~~a~~~l---gv~p~~~l~VGDs~~Di~aA~~aGi~-----------~I~v~~g~~~~~~~~~ad~~i~sl~el~ 217 (382)
T PLN02940 152 SPDIFLEAAKRL---NVEPSNCLVIEDSLPGVMAGKAAGME-----------VIAVPSIPKQTHLYSSADEVINSLLDLQ 217 (382)
T ss_pred CHHHHHHHHHHc---CCChhHEEEEeCCHHHHHHHHHcCCE-----------EEEECCCCcchhhccCccEEeCCHhHcC
Confidence 567889999999 99999999999999999999999973 356665532 256777888877754
No 194
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=96.93 E-value=0.023 Score=60.35 Aligned_cols=54 Identities=24% Similarity=0.319 Sum_probs=42.2
Q ss_pred ccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHH--HHhhc
Q 002955 591 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLA--EWFSS 649 (863)
Q Consensus 591 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~--~~~~~ 649 (863)
++++++||+||||.. ...+-+.+.++|++| ++.|..++|+|..+..... +.+..
T Consensus 7 ~~~~~~~D~dG~l~~----~~~~~pga~e~L~~L-~~~G~~~~ivTN~~~~~~~~~~~L~~ 62 (242)
T TIGR01459 7 DYDVFLLDLWGVIID----GNHTYPGAVQNLNKI-IAQGKPVYFVSNSPRNIFSLHKTLKS 62 (242)
T ss_pred cCCEEEEeccccccc----CCccCccHHHHHHHH-HHCCCEEEEEeCCCCChHHHHHHHHH
Confidence 368999999999997 345679999999999 7789999999886654333 44443
No 195
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=96.89 E-value=0.022 Score=60.28 Aligned_cols=50 Identities=28% Similarity=0.427 Sum_probs=41.3
Q ss_pred eEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEc---CCChhhHHHHhhc
Q 002955 595 ILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVS---GKDRDTLAEWFSS 649 (863)
Q Consensus 595 I~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~T---GR~~~~l~~~~~~ 649 (863)
++||+||||++ ... +-+.+.++|+.+ +..|.+++++| ||+...+.+.+..
T Consensus 1 ~lfD~DGvL~~---~~~-~~~~a~e~i~~l-~~~g~~~~~~tN~~~~~~~~~~~~l~~ 53 (236)
T TIGR01460 1 FLFDIDGVLWL---GHK-PIPGAAEALNRL-RAKGKPVVFLTNNSSRSEEDYAEKLSS 53 (236)
T ss_pred CEEeCcCccCc---CCc-cCcCHHHHHHHH-HHCCCeEEEEECCCCCCHHHHHHHHHH
Confidence 58999999998 344 445889999998 88899999998 8999988777754
No 196
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=96.88 E-value=0.004 Score=74.51 Aligned_cols=64 Identities=11% Similarity=0.185 Sum_probs=50.6
Q ss_pred HHHhcccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCC-CeEEEEcCCChhhHHHHhhcc
Q 002955 586 AYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPK-NVVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 586 ~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g-~~V~I~TGR~~~~l~~~~~~l 650 (863)
.+.....+.+++..||+++..-.....+-+.+.+.|++| ++.| +.++++||.+........+.+
T Consensus 358 ~~~~~g~~~~~v~~~~~~~g~i~~~d~~~~g~~e~l~~L-~~~g~i~v~ivTgd~~~~a~~i~~~l 422 (556)
T TIGR01525 358 EGESQGKTVVFVAVDGELLGVIALRDQLRPEAKEAIAAL-KRAGGIKLVMLTGDNRSAAEAVAAEL 422 (556)
T ss_pred HHhhCCcEEEEEEECCEEEEEEEecccchHhHHHHHHHH-HHcCCCeEEEEeCCCHHHHHHHHHHh
Confidence 344555688889999988862223456889999999998 8889 999999999999988888543
No 197
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.81 E-value=0.0023 Score=67.57 Aligned_cols=70 Identities=16% Similarity=0.247 Sum_probs=50.0
Q ss_pred cCCHHHHHHHHHhcccceeEecCCccccCCCC---CCCC-CCH---------------------------HHHHHHHHhh
Q 002955 577 KLSIDHIVSAYKRTKNRAILLDYDGTIMVPGS---ISTS-PNA---------------------------EAVAILDNLC 625 (863)
Q Consensus 577 ~l~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~---~~~~-~s~---------------------------~~~~aL~~L~ 625 (863)
=.++++|.+..+..+.-.|+||+||||++..+ .... +++ .+.+.|+.+
T Consensus 48 ~~~~~~~~~~~~~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l- 126 (237)
T TIGR01672 48 WISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMH- 126 (237)
T ss_pred EEEHHHHHHhcCCCCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHH-
Confidence 36789999988777666999999999998543 1111 122 267788887
Q ss_pred cCCCCeEEEEcCCC----hhhHHHHh
Q 002955 626 RDPKNVVFLVSGKD----RDTLAEWF 647 (863)
Q Consensus 626 ~d~g~~V~I~TGR~----~~~l~~~~ 647 (863)
++.|+.++|+|+|. ...++.++
T Consensus 127 ~~~G~~i~iVTnr~~~k~~~~a~~ll 152 (237)
T TIGR01672 127 QRRGDAIFFVTGRTPGKTDTVSKTLA 152 (237)
T ss_pred HHCCCEEEEEeCCCCCcCHHHHHHHH
Confidence 78899999999993 33444444
No 198
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=96.70 E-value=0.0038 Score=61.15 Aligned_cols=35 Identities=26% Similarity=0.328 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhh
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIK 797 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag 797 (863)
+...+.++++++ |+++ ++++|||+.+|+.+-+.+|
T Consensus 120 ~~~~~~~~~~~~---~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 120 EPEIFLAALESL---GLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred CHHHHHHHHHHc---CCCC-CEEEEeCCHHHHHHHHHcc
Confidence 678899999998 9988 9999999999999888765
No 199
>PRK11590 hypothetical protein; Provisional
Probab=96.69 E-value=0.0032 Score=65.45 Aligned_cols=38 Identities=13% Similarity=0.179 Sum_probs=28.2
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhh
Q 002955 756 GVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 799 (863)
Q Consensus 756 gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 799 (863)
|-.|-..++.. + |.+.+...+-|||.||++||+.+++.
T Consensus 161 g~~K~~~l~~~---~---~~~~~~~~aY~Ds~~D~pmL~~a~~~ 198 (211)
T PRK11590 161 GHEKVAQLERK---I---GTPLRLYSGYSDSKQDNPLLYFCQHR 198 (211)
T ss_pred ChHHHHHHHHH---h---CCCcceEEEecCCcccHHHHHhCCCC
Confidence 44455444443 3 55667789999999999999999974
No 200
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=96.68 E-value=0.011 Score=65.76 Aligned_cols=114 Identities=13% Similarity=0.120 Sum_probs=80.6
Q ss_pred ccceeEecCCccccCCC--CC------CCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcEE
Q 002955 591 KNRAILLDYDGTIMVPG--SI------STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYF 662 (863)
Q Consensus 591 ~~rlI~~DlDGTLl~~~--~~------~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa~ 662 (863)
.+|+|++|+|+||.... .. -..+.+.+.+.|++| ++.|+.++|||..+...+...+...+.
T Consensus 2 ~~k~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L-~~~Gi~lai~S~n~~~~a~~~l~~~~~---------- 70 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTL-KKQGFLLALASKNDEDDAKKVFERRKD---------- 70 (320)
T ss_pred CeEEEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHH-HhCCCEEEEEcCCCHHHHHHHHHhCcc----------
Confidence 36899999999998732 00 112457899999998 888999999999988877777642110
Q ss_pred EEeCCceeEEeecCCCCccHHHHHHHHHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcCCCeE
Q 002955 663 VRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVS 742 (863)
Q Consensus 663 I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~~~ 742 (863)
+.. +.++| ..
T Consensus 71 -----------~~~------------~~~~f-----------------------------------------------~~ 80 (320)
T TIGR01686 71 -----------FIL------------QAEDF-----------------------------------------------DA 80 (320)
T ss_pred -----------ccC------------cHHHe-----------------------------------------------eE
Confidence 000 00000 00
Q ss_pred EEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhh
Q 002955 743 VKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIK 797 (863)
Q Consensus 743 v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag 797 (863)
+..+ .. .|...++.+++++ |++++.+++|||+..|+.+.+.+.
T Consensus 81 ~~~~-----~~----pk~~~i~~~~~~l---~i~~~~~vfidD~~~d~~~~~~~l 123 (320)
T TIGR01686 81 RSIN-----WG----PKSESLRKIAKKL---NLGTDSFLFIDDNPAERANVKITL 123 (320)
T ss_pred EEEe-----cC----chHHHHHHHHHHh---CCCcCcEEEECCCHHHHHHHHHHC
Confidence 1011 12 4999999999999 999999999999999999988865
No 201
>PRK10671 copA copper exporting ATPase; Provisional
Probab=96.68 E-value=0.0063 Score=76.34 Aligned_cols=64 Identities=19% Similarity=0.242 Sum_probs=47.7
Q ss_pred HHHHhcccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhc
Q 002955 585 SAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSS 649 (863)
Q Consensus 585 ~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~ 649 (863)
..+.....+.+++-.||+++..-.....+-+.+.++|++| ++.|+.++++||......+.+.+.
T Consensus 623 ~~~~~~g~~~v~va~~~~~~g~~~l~d~~r~~a~~~i~~L-~~~gi~v~~~Tgd~~~~a~~ia~~ 686 (834)
T PRK10671 623 TAQASQGATPVLLAVDGKAAALLAIRDPLRSDSVAALQRL-HKAGYRLVMLTGDNPTTANAIAKE 686 (834)
T ss_pred HHHHhCCCeEEEEEECCEEEEEEEccCcchhhHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHH
Confidence 3444455677888889987631113445667888999998 888999999999999988888754
No 202
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=96.53 E-value=0.0048 Score=63.49 Aligned_cols=36 Identities=28% Similarity=0.277 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHhhcCCCcceEEEEeCCc-chHHHHHHhhh
Q 002955 760 GLVAQHQLETMHQKGMLPDFVLCIGDDR-SDEDMFEVIKS 798 (863)
Q Consensus 760 G~al~~Ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~ 798 (863)
....+++++++ |++++++++|||+. +|+..-+.+|.
T Consensus 163 ~~~~~~~~~~~---~~~~~~~~~IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 163 PKIFQEALERA---GISPEEALHIGDSLRNDYQGARAAGW 199 (203)
T ss_pred HHHHHHHHHHc---CCChhHEEEECCCchHHHHHHHHcCC
Confidence 45688889988 99999999999997 89999999986
No 203
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=96.51 E-value=0.0071 Score=71.97 Aligned_cols=59 Identities=17% Similarity=0.204 Sum_probs=45.6
Q ss_pred ccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCC-eEEEEcCCChhhHHHHhhcc
Q 002955 591 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKN-VVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 591 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~-~V~I~TGR~~~~l~~~~~~l 650 (863)
..+.++.-.||++...-.....+-+.+.++|++| ++.|+ .++++||.+....+.+.+.+
T Consensus 341 ~~~~~~v~~~~~~~g~i~~~d~l~~~~~e~i~~L-~~~Gi~~v~vvTgd~~~~a~~i~~~l 400 (536)
T TIGR01512 341 GKTIVHVARDGTYLGYILLSDEPRPDAAEAIAEL-KALGIEKVVMLTGDRRAVAERVAREL 400 (536)
T ss_pred CCeEEEEEECCEEEEEEEEeccchHHHHHHHHHH-HHcCCCcEEEEcCCCHHHHHHHHHHc
Confidence 3456666778887752113456789999999998 88899 99999999999998888643
No 204
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=96.47 E-value=0.0092 Score=58.33 Aligned_cols=61 Identities=21% Similarity=0.224 Sum_probs=54.0
Q ss_pred HHhcccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc
Q 002955 587 YKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 587 y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l 650 (863)
.++..+|-|++|+|.||++. .+...++++++-+.++ ++.|+.++|+|.-+...+..+...+
T Consensus 23 L~~~Gikgvi~DlDNTLv~w--d~~~~tpe~~~W~~e~-k~~gi~v~vvSNn~e~RV~~~~~~l 83 (175)
T COG2179 23 LKAHGIKGVILDLDNTLVPW--DNPDATPELRAWLAEL-KEAGIKVVVVSNNKESRVARAAEKL 83 (175)
T ss_pred HHHcCCcEEEEeccCceecc--cCCCCCHHHHHHHHHH-HhcCCEEEEEeCCCHHHHHhhhhhc
Confidence 35678999999999999997 6778899999999998 9999999999999988898888543
No 205
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=96.45 E-value=0.0015 Score=68.23 Aligned_cols=38 Identities=11% Similarity=0.048 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhh
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 799 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 799 (863)
+......+++++ |++++++++|||+.+|+..-+.+|..
T Consensus 144 ~p~~~~~a~~~~---~~~p~~~l~igDs~~di~aA~~aG~~ 181 (221)
T PRK10563 144 DPALMFHAAEAM---NVNVENCILVDDSSAGAQSGIAAGME 181 (221)
T ss_pred ChHHHHHHHHHc---CCCHHHeEEEeCcHhhHHHHHHCCCE
Confidence 578889999999 99999999999999999999999873
No 206
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=96.45 E-value=0.016 Score=69.31 Aligned_cols=59 Identities=14% Similarity=0.211 Sum_probs=47.6
Q ss_pred cccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhc
Q 002955 590 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSS 649 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~ 649 (863)
...+.++++.||+++..-.-...+.+.+.++|++| ++.|+.++++||......+.+.+.
T Consensus 383 ~g~~~~~~~~~~~~~g~~~~~d~l~~~a~e~i~~L-k~~Gi~v~ilSgd~~~~a~~ia~~ 441 (562)
T TIGR01511 383 QGSTSVLVAVNGELAGVFALEDQLRPEAKEVIQAL-KRRGIEPVMLTGDNRKTAKAVAKE 441 (562)
T ss_pred CCCEEEEEEECCEEEEEEEecccccHHHHHHHHHH-HHcCCeEEEEcCCCHHHHHHHHHH
Confidence 34578889999998752113456789999999998 888999999999999988888754
No 207
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=96.40 E-value=0.012 Score=70.94 Aligned_cols=67 Identities=15% Similarity=0.109 Sum_probs=51.2
Q ss_pred HHHHHHhcccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc
Q 002955 583 IVSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 583 i~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l 650 (863)
..+.+.+...+.+++-.|++++.--.....+-+++.+++++| ++.|+.++++||........+..++
T Consensus 417 ~~~~~a~~G~r~l~va~~~~~lG~i~l~D~~Rp~a~eaI~~l-~~~Gi~v~miTGD~~~ta~~iA~~l 483 (675)
T TIGR01497 417 AVDQVARQGGTPLVVCEDNRIYGVIYLKDIVKGGIKERFAQL-RKMGIKTIMITGDNRLTAAAIAAEA 483 (675)
T ss_pred HHHHHHhCCCeEEEEEECCEEEEEEEecccchhHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHc
Confidence 334455555677888788887752113456789999999997 8899999999999999999988643
No 208
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=96.29 E-value=0.14 Score=56.40 Aligned_cols=203 Identities=20% Similarity=0.216 Sum_probs=112.5
Q ss_pred CCHHHHHHHHHhcccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc-------
Q 002955 578 LSIDHIVSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC------- 650 (863)
Q Consensus 578 l~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l------- 650 (863)
|++.+|..--+....+|+-||=|+||..... .-..+..++.-|-+| -..|+.|.|+|.=++....++...+
T Consensus 133 LN~AQi~al~~~~~L~LvTFDgDvTLY~DG~-sl~~d~pvi~~ii~L-L~~gv~VgIVTAAGY~~a~kY~~RL~GLL~a~ 210 (408)
T PF06437_consen 133 LNTAQIMALAKNYGLKLVTFDGDVTLYEDGA-SLEPDNPVIPRIIKL-LRRGVKVGIVTAAGYPGAEKYEERLHGLLDAF 210 (408)
T ss_pred HHHHHHHHhcccCCceEEEEcCCcccccCCC-CCCCCchHHHHHHHH-HhcCCeEEEEeCCCCCChHHHHHHHHHHHHHH
Confidence 3444444433334679999999999998331 112355666666666 5679999999988876554443321
Q ss_pred -----------CCceE-EccCcEEEEeCCc----------eeEEeecCCCCccHH--------HHHHHHHHHHhhc--CC
Q 002955 651 -----------EGLGI-AAEHGYFVRPNYG----------VDWETCVSVPDFSWK--------QIAEPVMKLYTET--TD 698 (863)
Q Consensus 651 -----------~~l~l-iaenGa~I~~~~~----------~~w~~~~~~~~~~w~--------~~v~~i~~~y~~~--~~ 698 (863)
.++.+ .+|.-+.++.+.. ..|... .-..|. +.++..+....++ .|
T Consensus 211 ~~~~~Lt~~qk~~l~VMGGEsNYLfr~~~~~~~~L~~v~~~~W~~~---~m~~W~~~dI~~lLD~AE~~L~~~~~~l~Lp 287 (408)
T PF06437_consen 211 KDSTDLTPEQKSNLYVMGGESNYLFRYDPESPHGLEFVPREEWLLP---EMKTWSEEDITELLDIAEAALRDCVKRLNLP 287 (408)
T ss_pred HhccCCCHHHhcCEEEecccceeEEEecCCCCCCeEEccHHhccCc---cccCcCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 12222 2455666666543 134321 112332 2233333333332 23
Q ss_pred CceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcC------CCeEEEECC--cEEEEecCCCCHHHHHHHHHHHH
Q 002955 699 GSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLAN------EPVSVKSGP--NIVEVKPQGVNKGLVAQHQLETM 770 (863)
Q Consensus 699 gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~------~~~~v~~g~--~~vEI~p~gvsKG~al~~Ll~~l 770 (863)
..|-.|+-++-+.- .....+...+.+|+.-.++..+.. .++....|. -++||-. |..|++.+.+.+
T Consensus 288 -a~IiRK~RAVGivP-~~~~ki~rE~LEE~VL~vq~~L~~~~~~~~ipfCAFNGGsDVwVDIGd----Ks~GV~~lQ~y~ 361 (408)
T PF06437_consen 288 -ATIIRKERAVGIVP-KPGVKIIREQLEEIVLTVQKTLEESPPGRRIPFCAFNGGSDVWVDIGD----KSLGVRALQKYF 361 (408)
T ss_pred -eeEEeecceeeEec-CCCCcchhhhHHHHHHHHHHHHHhcCCCCCCceeeecCCcceEEEcCC----cHHhHHHHHHHH
Confidence 34445554443321 111122345666665444444432 355555554 4788765 999999888776
Q ss_pred hh-cCCCcceEEEEeC-----CcchHH
Q 002955 771 HQ-KGMLPDFVLCIGD-----DRSDED 791 (863)
Q Consensus 771 ~~-~gi~~d~vlaiGD-----~~ND~~ 791 (863)
.. .++.+.+++-+|| +.||..
T Consensus 362 ~~~~~i~~~~tLHVGDQF~s~GaNDfk 388 (408)
T PF06437_consen 362 DPEGGIKPSETLHVGDQFLSAGANDFK 388 (408)
T ss_pred HhccCCCccceeeehhhhhccCCcchh
Confidence 22 3799999999999 347754
No 209
>PRK08238 hypothetical protein; Validated
Probab=96.27 E-value=0.02 Score=66.88 Aligned_cols=34 Identities=18% Similarity=0.174 Sum_probs=25.8
Q ss_pred CHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhh
Q 002955 614 NAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFS 648 (863)
Q Consensus 614 s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~ 648 (863)
.+.+.+.|+++ ++.|..++++||.+...++....
T Consensus 74 ~pga~e~L~~l-k~~G~~v~LaTas~~~~a~~i~~ 107 (479)
T PRK08238 74 NEEVLDYLRAE-RAAGRKLVLATASDERLAQAVAA 107 (479)
T ss_pred ChhHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHH
Confidence 46777888886 77788888888888777776664
No 210
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=96.25 E-value=0.0014 Score=59.92 Aligned_cols=51 Identities=25% Similarity=0.419 Sum_probs=38.0
Q ss_pred eEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc
Q 002955 595 ILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 595 I~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l 650 (863)
|+||+||||.. ...+-+.+.++|++| ++.|.+++++|..+...-..+...+
T Consensus 1 ~l~D~dGvl~~----g~~~ipga~e~l~~L-~~~g~~~~~lTNns~~s~~~~~~~L 51 (101)
T PF13344_consen 1 FLFDLDGVLYN----GNEPIPGAVEALDAL-RERGKPVVFLTNNSSRSREEYAKKL 51 (101)
T ss_dssp EEEESTTTSEE----TTEE-TTHHHHHHHH-HHTTSEEEEEES-SSS-HHHHHHHH
T ss_pred CEEeCccEeEe----CCCcCcCHHHHHHHH-HHcCCCEEEEeCCCCCCHHHHHHHH
Confidence 68999999997 455678889999998 8889999999877655555554443
No 211
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=96.23 E-value=0.027 Score=71.15 Aligned_cols=65 Identities=12% Similarity=0.139 Sum_probs=48.4
Q ss_pred HHHHhcccceeEecCCc-----cccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc
Q 002955 585 SAYKRTKNRAILLDYDG-----TIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 585 ~~y~~s~~rlI~~DlDG-----TLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l 650 (863)
+.|.+...|.+++=+++ |++.--....++-+.+.+++++| ++.|+.++++||........+...+
T Consensus 496 ~~~a~~G~rvl~~A~~~~~~~l~~lGli~l~Dp~r~~~~~~i~~l-~~~Gi~v~miTGD~~~tA~~ia~~~ 565 (884)
T TIGR01522 496 AEMASAGLRVIAFASGPEKGQLTFLGLVGINDPPRPGVKEAVTTL-ITGGVRIIMITGDSQETAVSIARRL 565 (884)
T ss_pred HHHHhcCCEEEEEEEEcCCCCeEEEEEEeccCcchhHHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHHc
Confidence 34444556878776665 44432113556789999999997 8999999999999999999998643
No 212
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=96.21 E-value=0.0075 Score=61.10 Aligned_cols=37 Identities=11% Similarity=-0.005 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhh
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 798 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 798 (863)
+...+.++++++ |.+++++++|||+.+|+..-+.+|.
T Consensus 144 ~p~~~~~~~~~~---~~~~~~~l~igDs~~di~aA~~aG~ 180 (188)
T PRK10725 144 APDTFLRCAQLM---GVQPTQCVVFEDADFGIQAARAAGM 180 (188)
T ss_pred ChHHHHHHHHHc---CCCHHHeEEEeccHhhHHHHHHCCC
Confidence 567899999999 9999999999999999999999987
No 213
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=96.18 E-value=0.002 Score=65.04 Aligned_cols=37 Identities=11% Similarity=0.045 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhh
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 798 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 798 (863)
+....+++++++ |++++++++|||+.+|+.+-+.+|.
T Consensus 144 ~~~~~~~~~~~~---~~~~~~~v~IgD~~~di~aA~~~G~ 180 (185)
T TIGR02009 144 HPETFLLAAELL---GVSPNECVVFEDALAGVQAARAAGM 180 (185)
T ss_pred ChHHHHHHHHHc---CCCHHHeEEEeCcHhhHHHHHHCCC
Confidence 455778888888 9999999999999999999999986
No 214
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=96.12 E-value=0.1 Score=53.89 Aligned_cols=36 Identities=19% Similarity=0.201 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhh
Q 002955 760 GLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 798 (863)
Q Consensus 760 G~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 798 (863)
....+.+++++ |++++++++|||+..|+.+-+.+|.
T Consensus 155 p~~~~~~~~~~---g~~~~~~l~i~D~~~di~aA~~aG~ 190 (211)
T TIGR02247 155 PRIYQLMLERL---GVAPEECVFLDDLGSNLKPAAALGI 190 (211)
T ss_pred HHHHHHHHHHc---CCCHHHeEEEcCCHHHHHHHHHcCC
Confidence 56778888888 9999999999999999999999986
No 215
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=96.10 E-value=0.038 Score=61.86 Aligned_cols=47 Identities=15% Similarity=0.264 Sum_probs=37.9
Q ss_pred ccceeEecCCccccCCCC--------CCCCCCHHHHHHHHHhhcCCCCeEEEEcCC
Q 002955 591 KNRAILLDYDGTIMVPGS--------ISTSPNAEAVAILDNLCRDPKNVVFLVSGK 638 (863)
Q Consensus 591 ~~rlI~~DlDGTLl~~~~--------~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR 638 (863)
+.|++++|.||||....+ ..-.+-+.+.+.|..| ++.|..++|+|+.
T Consensus 1 ~~k~l~lDrDgtl~~~~~~~y~~~~~~~~~l~pGV~e~L~~L-k~~G~kL~IvTNq 55 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPTDFQVDSLDKLAFEPGVIPALLKL-QKAGYKLVMVTNQ 55 (354)
T ss_pred CCcEEEEeCCCCccCCCCccccccCcccceECcCHHHHHHHH-HhCCCeEEEEECC
Confidence 468999999999998421 1234668899999998 8889999999986
No 216
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=96.07 E-value=0.012 Score=60.73 Aligned_cols=66 Identities=15% Similarity=0.259 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC------ccccceecCCHhH
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------PSKAKYYLDDTAE 832 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~A~y~l~d~~e 832 (863)
|...++.+++++ |++++++++|||+.+|+.+.+.+|.. +++|.+|.. ...|+|.+++..+
T Consensus 133 ~~~~~~~~~~~~---~~~~~~~l~igD~~~Di~aA~~~Gi~-----------~i~~~~g~~~~~~l~~~~~~~~~~~~~~ 198 (205)
T TIGR01454 133 APDIVREALRLL---DVPPEDAVMVGDAVTDLASARAAGTA-----------TVAALWGEGDAGELLAARPDFLLRKPQS 198 (205)
T ss_pred ChHHHHHHHHHc---CCChhheEEEcCCHHHHHHHHHcCCe-----------EEEEEecCCChhhhhhcCCCeeeCCHHH
Confidence 577888899988 99999999999999999999999973 478888852 3568999999999
Q ss_pred HHHHHH
Q 002955 833 ILRMLL 838 (863)
Q Consensus 833 V~~~L~ 838 (863)
+..++.
T Consensus 199 l~~~~~ 204 (205)
T TIGR01454 199 LLALCR 204 (205)
T ss_pred HHHHhh
Confidence 887653
No 217
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=96.06 E-value=0.04 Score=70.58 Aligned_cols=61 Identities=11% Similarity=0.047 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC-----ccccceecCCHhHH
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK-----PSKAKYYLDDTAEI 833 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~-----~s~A~y~l~d~~eV 833 (863)
+......+++++ |++++++++|||+.+|+..-+.+|.. +++|..|.. ...|.+.+++..++
T Consensus 220 ~Pe~~~~a~~~l---gv~p~e~v~IgDs~~Di~AA~~aGm~-----------~I~v~~~~~~~~L~~~~a~~vi~~l~el 285 (1057)
T PLN02919 220 APDIFLAAAKIL---GVPTSECVVIEDALAGVQAARAAGMR-----------CIAVTTTLSEEILKDAGPSLIRKDIGNI 285 (1057)
T ss_pred CHHHHHHHHHHc---CcCcccEEEEcCCHHHHHHHHHcCCE-----------EEEECCCCCHHHHhhCCCCEEECChHHC
Confidence 467888889998 99999999999999999999999873 356665532 35678889998886
No 218
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=96.05 E-value=0.0067 Score=62.48 Aligned_cols=57 Identities=14% Similarity=0.141 Sum_probs=39.4
Q ss_pred ceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc
Q 002955 593 RAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 593 rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l 650 (863)
..+.+..+++++..-.....+-+.+.++|++| ++.|+.++++||............+
T Consensus 108 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~L-~~~Gi~~~i~TGD~~~~a~~~~~~l 164 (215)
T PF00702_consen 108 TVIVLAVNLIFLGLFGLRDPLRPGAKEALQEL-KEAGIKVAILTGDNESTASAIAKQL 164 (215)
T ss_dssp HCEEEEESHEEEEEEEEEEEBHTTHHHHHHHH-HHTTEEEEEEESSEHHHHHHHHHHT
T ss_pred cccceeecCeEEEEEeecCcchhhhhhhhhhh-hccCcceeeeecccccccccccccc
Confidence 34444446665531111224557788999998 7789999999999999998888643
No 219
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=96.02 E-value=0.036 Score=68.49 Aligned_cols=65 Identities=9% Similarity=0.114 Sum_probs=50.6
Q ss_pred HHHHhcccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc
Q 002955 585 SAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 585 ~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l 650 (863)
+.+.....+.+++=+||+++..-.-..++-+.+.++|++| ++.|+.++++||........+.+.+
T Consensus 541 ~~~~~~g~~~v~va~~~~~~g~i~l~d~~r~~a~~~i~~L-~~~gi~~~llTGd~~~~a~~ia~~l 605 (741)
T PRK11033 541 NELESAGKTVVLVLRNDDVLGLIALQDTLRADARQAISEL-KALGIKGVMLTGDNPRAAAAIAGEL 605 (741)
T ss_pred HHHHhCCCEEEEEEECCEEEEEEEEecCCchhHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHc
Confidence 4455555678888889988742113456788999999998 8889999999999999999988643
No 220
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=95.89 E-value=0.026 Score=57.49 Aligned_cols=94 Identities=19% Similarity=0.256 Sum_probs=60.2
Q ss_pred CcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHH-HHHHhhhhcCCCCCCCCcceEEEEeC--CCc--c
Q 002955 747 PNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDED-MFEVIKSAAAGPSLSPVAEVFACTVG--QKP--S 821 (863)
Q Consensus 747 ~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~-Mf~~ag~~~~~~~~~~~~~~~av~vG--~~~--s 821 (863)
++....-|++.=||..+..+.......|+..+.++++||+.||.. |++..+.-++++- +-|++.-- .-| -
T Consensus 152 ~hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampR-----kgfpl~k~~~~~p~~~ 226 (256)
T KOG3120|consen 152 QHSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPR-----KGFPLWKLISANPMLL 226 (256)
T ss_pred CCccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceeccc-----CCCchHhhhhcCccee
Confidence 345556788889999999998887778999999999999999984 4444433333211 01111000 011 2
Q ss_pred cccee-cCCHhHHHHHHHHHHHhhc
Q 002955 822 KAKYY-LDDTAEILRMLLGLAEASA 845 (863)
Q Consensus 822 ~A~y~-l~d~~eV~~~L~~L~~~~~ 845 (863)
+|.-. -.+-.++...|+.++...+
T Consensus 227 kasV~~W~sg~d~~~~L~~lik~~~ 251 (256)
T KOG3120|consen 227 KASVLEWSSGEDLERILQQLIKTIQ 251 (256)
T ss_pred eeeEEecccHHHHHHHHHHHHHHhh
Confidence 23332 2577888888888876543
No 221
>PTZ00445 p36-lilke protein; Provisional
Probab=95.70 E-value=0.017 Score=59.07 Aligned_cols=158 Identities=16% Similarity=0.204 Sum_probs=94.8
Q ss_pred CHHHHHHHHHhcccceeEecCCccccCCC---CCCCC---------CCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHH
Q 002955 579 SIDHIVSAYKRTKNRAILLDYDGTIMVPG---SISTS---------PNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEW 646 (863)
Q Consensus 579 ~~~~i~~~y~~s~~rlI~~DlDGTLl~~~---~~~~~---------~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~ 646 (863)
..+.++..+++..+|+|++|+|-||++-. ..++. ++++....+++| ++.|+.|+|+|=-+...
T Consensus 30 ~~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l-~~~~I~v~VVTfSd~~~---- 104 (219)
T PTZ00445 30 SADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRL-KNSNIKISVVTFSDKEL---- 104 (219)
T ss_pred HHHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHH-HHCCCeEEEEEccchhh----
Confidence 35667777888999999999999999711 02232 789999999997 88999999999654332
Q ss_pred hhccCCceEEccCcEEEEeCCceeEEeecCCCCccHHHHHHHHHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHH
Q 002955 647 FSSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAK 726 (863)
Q Consensus 647 ~~~l~~l~liaenGa~I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~ 726 (863)
+ +. ..++.+| .| .+.++..++.-. . ..-++. +..| . |.+ |+-.
T Consensus 105 ~---~~----~~~~~~I--sg---------------~~li~~~lk~s~--~-~~~i~~-----~~~y--y-p~~--w~~p 147 (219)
T PTZ00445 105 I---PS----ENRPRYI--SG---------------DRMVEAALKKSK--C-DFKIKK-----VYAY--Y-PKF--WQEP 147 (219)
T ss_pred c---cc----cCCccee--ch---------------HHHHHHHHHhcC--c-cceeee-----eeee--C-Ccc--cCCh
Confidence 1 00 0111111 01 122333322110 0 000000 1111 1 111 1111
Q ss_pred HHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhh
Q 002955 727 ELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 798 (863)
Q Consensus 727 el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 798 (863)
..... .=-++|....|-.=+++++++. |+.|++++.|=|+....+..+.+|.
T Consensus 148 ~~y~~-----------------~gl~KPdp~iK~yHle~ll~~~---gl~peE~LFIDD~~~NVeaA~~lGi 199 (219)
T PTZ00445 148 SDYRP-----------------LGLDAPMPLDKSYHLKQVCSDF---NVNPDEILFIDDDMNNCKNALKEGY 199 (219)
T ss_pred hhhhh-----------------hcccCCCccchHHHHHHHHHHc---CCCHHHeEeecCCHHHHHHHHHCCC
Confidence 11111 1124566677878889999999 9999999999999999999999886
No 222
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=95.66 E-value=0.041 Score=58.69 Aligned_cols=86 Identities=24% Similarity=0.496 Sum_probs=58.0
Q ss_pred HHHHHHHhhcCC---CCCEEEEeCcccchHHHHHHhhCC------CCeEEEEEeCC-C----CChhHhhc--CCCh----
Q 002955 187 IFADKVMEVISP---DDDFVWVHDYHLMVLPTFLRKRFN------RVKLGFFLHSP-F----PSSEIYRT--LPIR---- 246 (863)
Q Consensus 187 ~fa~~i~~~~~p---~~D~VwvhDyhl~llp~~lr~~~~------~~~i~~flH~P-f----P~~e~~r~--lp~r---- 246 (863)
.|+.++++.++. .-|+|++||||-.++|.+||.... ++|+.|++|-. | |. +.+.. +|+.
T Consensus 118 ~fs~a~le~~~~l~~~pDIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~-~~~~~~gl~~~~~~~ 196 (245)
T PF08323_consen 118 FFSRAALELLKKLGWKPDIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPP-EDLKALGLPDEYFQN 196 (245)
T ss_dssp HHHHHHHHHHCTCT-S-SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEG-GGGGCTT-GGGGS-S
T ss_pred HHHHHHHHHHHhhCCCCCEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCH-HHHHHcCCCHHHhcc
Confidence 455555544431 239999999999999999999763 59999999952 2 22 22221 2321
Q ss_pred ----------HHHHHHHHhCCEecccCHHHHHHHHHH
Q 002955 247 ----------DELLRALLNADLIGFHTFDYARHFLSC 273 (863)
Q Consensus 247 ----------~eil~~ll~~dligF~t~~~~~~Fl~~ 273 (863)
.-+--|+..||.|-.-++.|++.-++.
T Consensus 197 ~~~~~~~~~in~lk~gi~~AD~v~TVS~~Ya~Ei~~~ 233 (245)
T PF08323_consen 197 LDEYEFYGQINFLKAGIVYADKVTTVSPTYAREIQTP 233 (245)
T ss_dssp TTTTEETTEEEHHHHHHHHSSEEEESSHHHHHHTTSH
T ss_pred ccccccccccCHHHHHHHhcCEeeeCCHHHHHHHhCc
Confidence 245577999999999999998866543
No 223
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=95.45 E-value=0.045 Score=69.93 Aligned_cols=40 Identities=18% Similarity=0.164 Sum_probs=35.1
Q ss_pred CCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc
Q 002955 610 STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 610 ~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l 650 (863)
..++-+++.++++++ ++.|+.|+++|||.......+..++
T Consensus 566 ~Dplr~~v~~aI~~l-~~~Gi~v~~~TGd~~~ta~~ia~~~ 605 (997)
T TIGR01106 566 IDPPRAAVPDAVGKC-RSAGIKVIMVTGDHPITAKAIAKGV 605 (997)
T ss_pred cCCChHHHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHHc
Confidence 446778999999997 8999999999999999999988643
No 224
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=95.39 E-value=0.1 Score=66.15 Aligned_cols=41 Identities=15% Similarity=0.321 Sum_probs=35.3
Q ss_pred CCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc
Q 002955 609 ISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 609 ~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l 650 (863)
...++-+.+.++++++ ++.|++++++||..........+.+
T Consensus 534 ~~Dplr~~v~e~I~~l-~~aGI~v~miTGD~~~tA~~ia~~~ 574 (917)
T TIGR01116 534 MLDPPRPEVADAIEKC-RTAGIRVIMITGDNKETAEAICRRI 574 (917)
T ss_pred eeCCCchhHHHHHHHH-HHCCCEEEEecCCCHHHHHHHHHHc
Confidence 3456789999999997 9999999999999999998888643
No 225
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=95.35 E-value=0.023 Score=60.11 Aligned_cols=62 Identities=16% Similarity=0.288 Sum_probs=44.7
Q ss_pred cCCHHHHHHHHHhcccceeEecCCccccCCCCC-------------------------------CCCCCHHHHHHHHHhh
Q 002955 577 KLSIDHIVSAYKRTKNRAILLDYDGTIMVPGSI-------------------------------STSPNAEAVAILDNLC 625 (863)
Q Consensus 577 ~l~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~~-------------------------------~~~~s~~~~~aL~~L~ 625 (863)
=.++++|.+.-...+...|.+|+|||+++.++. ...|-+.+.+.|+.|
T Consensus 48 ~~~~~~~~~~~~~~~p~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L- 126 (237)
T PRK11009 48 WVSVAQIEKSLEGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMH- 126 (237)
T ss_pred EEEHHHhhhhccCCCCcEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHH-
Confidence 367888988876555569999999999963210 011223477888887
Q ss_pred cCCCCeEEEEcCCC
Q 002955 626 RDPKNVVFLVSGKD 639 (863)
Q Consensus 626 ~d~g~~V~I~TGR~ 639 (863)
++.|+.++++|||+
T Consensus 127 ~~~G~~I~iVTnR~ 140 (237)
T PRK11009 127 VKRGDSIYFITGRT 140 (237)
T ss_pred HHCCCeEEEEeCCC
Confidence 77888999999986
No 226
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=95.30 E-value=0.04 Score=47.19 Aligned_cols=59 Identities=20% Similarity=0.314 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHhhcCCCcceEEEEeCC-cchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC--------ccccceecCCH
Q 002955 760 GLVAQHQLETMHQKGMLPDFVLCIGDD-RSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK--------PSKAKYYLDDT 830 (863)
Q Consensus 760 G~al~~Ll~~l~~~gi~~d~vlaiGD~-~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--------~s~A~y~l~d~ 830 (863)
...++.+++.+ +++++++++|||+ .+|+.+-+.+|.. .+.|..|.. ...++|++++.
T Consensus 7 p~~~~~a~~~~---~~~~~~~~~VGD~~~~Di~~a~~~G~~-----------~ilV~tG~~~~~~~~~~~~~pd~vv~~l 72 (75)
T PF13242_consen 7 PGMLEQALKRL---GVDPSRCVMVGDSLETDIEAAKAAGID-----------TILVLTGVYSPEDLEKAEHKPDYVVDDL 72 (75)
T ss_dssp HHHHHHHHHHH---TSGGGGEEEEESSTTTHHHHHHHTTSE-----------EEEESSSSSCCCGHHHSSSTTSEEESSG
T ss_pred HHHHHHHHHHc---CCCHHHEEEEcCCcHhHHHHHHHcCCc-----------EEEECCCCCCHHHHhccCCCCCEEECCH
Confidence 34667788888 9999999999999 9999999999973 245555542 24788888887
Q ss_pred hH
Q 002955 831 AE 832 (863)
Q Consensus 831 ~e 832 (863)
.|
T Consensus 73 ~e 74 (75)
T PF13242_consen 73 KE 74 (75)
T ss_dssp GG
T ss_pred Hh
Confidence 65
No 227
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=95.24 E-value=0.025 Score=52.88 Aligned_cols=54 Identities=26% Similarity=0.313 Sum_probs=42.7
Q ss_pred CCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCC--Cc----cccceecCCHhHHHHHHHHH
Q 002955 774 GMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ--KP----SKAKYYLDDTAEILRMLLGL 840 (863)
Q Consensus 774 gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~--~~----s~A~y~l~d~~eV~~~L~~L 840 (863)
+.+.++|+++||+.||+.|++.+...+ |++++ .+ ..|++++.+..+++.++...
T Consensus 90 kk~~~k~vmVGnGaND~laLr~ADlGI-------------~tiq~e~v~~r~l~~ADvvik~i~e~ldl~~~~ 149 (152)
T COG4087 90 KKRYEKVVMVGNGANDILALREADLGI-------------CTIQQEGVPERLLLTADVVLKEIAEILDLLKDT 149 (152)
T ss_pred cCCCcEEEEecCCcchHHHhhhcccce-------------EEeccCCcchHHHhhchhhhhhHHHHHHHhhcc
Confidence 456689999999999999999998752 55664 33 45888899999988887654
No 228
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=95.15 E-value=0.09 Score=63.81 Aligned_cols=65 Identities=11% Similarity=0.093 Sum_probs=50.0
Q ss_pred HHHHhcccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc
Q 002955 585 SAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 585 ~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l 650 (863)
+.+.+...+.+++-.|++++.--.-...+-+++.+++++| ++.|++++++||-.......+..++
T Consensus 418 ~~~a~~G~~~l~va~~~~~lG~i~l~D~~R~~~~eai~~L-r~~GI~vvMiTGDn~~TA~aIA~el 482 (679)
T PRK01122 418 DEVARKGGTPLVVAEDNRVLGVIYLKDIVKPGIKERFAEL-RKMGIKTVMITGDNPLTAAAIAAEA 482 (679)
T ss_pred HHHHhCCCcEEEEEECCeEEEEEEEeccCchhHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHHc
Confidence 4444455677777788888742113456789999999997 8999999999999999999988643
No 229
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=95.14 E-value=0.11 Score=66.27 Aligned_cols=138 Identities=16% Similarity=0.236 Sum_probs=88.2
Q ss_pred CCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcEEEEeCCceeEEeecCCCCccHHHHHHHH
Q 002955 610 STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPV 689 (863)
Q Consensus 610 ~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa~I~~~~~~~w~~~~~~~~~~w~~~v~~i 689 (863)
...+-+++.++++++ ++.|++++++||........+... +|+...++..+. ..+
T Consensus 577 ~Dplr~~~~~aI~~l-~~aGI~v~miTGD~~~tA~~iA~~---~GI~~~~~~vi~------------G~~---------- 630 (941)
T TIGR01517 577 KDPLRPGVREAVQEC-QRAGITVRMVTGDNIDTAKAIARN---CGILTFGGLAME------------GKE---------- 630 (941)
T ss_pred cCCCchhHHHHHHHH-HHCCCEEEEECCCChHHHHHHHHH---cCCCCCCceEee------------HHH----------
Confidence 446788999999997 889999999999999999998864 445433221100 000
Q ss_pred HHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHH
Q 002955 690 MKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLET 769 (863)
Q Consensus 690 ~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~ 769 (863)
++ ..+ .+.+.+.+.+. .-+-.+.|. .|...++.+.+.
T Consensus 631 ~~-----------------------~l~-----------~~el~~~i~~~-------~Vfar~sPe--~K~~iV~~lq~~ 667 (941)
T TIGR01517 631 FR-----------------------RLV-----------YEEMDPILPKL-------RVLARSSPL--DKQLLVLMLKDM 667 (941)
T ss_pred hh-----------------------hCC-----------HHHHHHHhccC-------eEEEECCHH--HHHHHHHHHHHC
Confidence 00 000 01122222221 123456664 588888887553
Q ss_pred HhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeC-C----CccccceecC--CHhHHHHHH
Q 002955 770 MHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVG-Q----KPSKAKYYLD--DTAEILRML 837 (863)
Q Consensus 770 l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG-~----~~s~A~y~l~--d~~eV~~~L 837 (863)
| .-|.++||+.||.+|++.|+. ++++| . .+..|++++- +...+.+++
T Consensus 668 ----g---~vVam~GDGvNDapALk~AdV--------------GIAmg~~gtdvAk~aADivL~dd~f~~I~~~i 721 (941)
T TIGR01517 668 ----G---EVVAVTGDGTNDAPALKLADV--------------GFSMGISGTEVAKEASDIILLDDNFASIVRAV 721 (941)
T ss_pred ----C---CEEEEECCCCchHHHHHhCCc--------------ceecCCCccHHHHHhCCEEEecCCHHHHHHHH
Confidence 4 469999999999999999985 56666 2 3577888874 455555555
No 230
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=95.10 E-value=0.054 Score=54.76 Aligned_cols=34 Identities=21% Similarity=0.354 Sum_probs=28.4
Q ss_pred HHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhc
Q 002955 615 AEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSS 649 (863)
Q Consensus 615 ~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~ 649 (863)
+.+.+.|+.+ ++.|..++|+||-....++.+...
T Consensus 92 ~~~~e~i~~~-~~~~~~v~IvS~~~~~~i~~~~~~ 125 (192)
T PF12710_consen 92 PDAMELIREL-KDNGIKVVIVSGSPDEIIEPIAER 125 (192)
T ss_dssp TTHHHHHHHH-HHTTSEEEEEEEEEHHHHHHHHHH
T ss_pred hhHHHHHHHH-HHCCCEEEEECCCcHHHHHHHHHH
Confidence 5667888887 777999999999998888888753
No 231
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=95.09 E-value=0.092 Score=67.70 Aligned_cols=185 Identities=14% Similarity=0.143 Sum_probs=94.4
Q ss_pred CCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcEEEEeCCceeEEeecCCCCcc-HHHHHHH
Q 002955 610 STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFS-WKQIAEP 688 (863)
Q Consensus 610 ~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa~I~~~~~~~w~~~~~~~~~~-w~~~v~~ 688 (863)
..++-+.+.+++++| ++.|++++++||-.......+...+ +++..+.-.+...+... .+.. ..+.+..
T Consensus 629 eD~lq~~v~etI~~L-~~AGIkv~mlTGD~~~TA~~IA~~~---~ii~~~~~~~~i~~~~~-------~~~~~~~~~i~~ 697 (1057)
T TIGR01652 629 EDKLQEGVPETIELL-RQAGIKIWVLTGDKVETAINIGYSC---RLLSRNMEQIVITSESL-------DATRSVEAAIKF 697 (1057)
T ss_pred hhhhhhccHHHHHHH-HHCCCeEEEEcCCcHHHHHHHHHHh---CCCCCCCeEEEEecCch-------hhhHHHHHHHHH
Confidence 445677888888887 8889999999999999998887543 44443332222221110 0000 0011111
Q ss_pred HHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHH
Q 002955 689 VMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLE 768 (863)
Q Consensus 689 i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~ 768 (863)
.......... ..-..+...+.+.-. .+......++.+++.+.+...... -+-.+.|. .|+..++.+.+
T Consensus 698 ~~~~~~~~~~-~~~~~~~~~lvi~G~----~l~~~l~~~~~~~f~~l~~~~~~v-----V~aR~sP~--qK~~IV~~lk~ 765 (1057)
T TIGR01652 698 GLEGTSEEFN-NLGDSGNVALVIDGK----SLGYALDEELEKEFLQLALKCKAV-----ICCRVSPS--QKADVVRLVKK 765 (1057)
T ss_pred HHHHHHHhhh-hhccCCceEEEEccH----HHHHHHhhHHHHHHHHHHhhCCEE-----EEeCCCHH--HHHHHHHHHHh
Confidence 0000000000 000011111222110 000000011122233333222111 13455564 69998888765
Q ss_pred HHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEe-CC----CccccceecCCHhHHHHHH
Q 002955 769 TMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTV-GQ----KPSKAKYYLDDTAEILRML 837 (863)
Q Consensus 769 ~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~v-G~----~~s~A~y~l~d~~eV~~~L 837 (863)
.. | .-|+++||+.||.+|++.|..+ |.+ |. +...|+|.+.+-..+.++|
T Consensus 766 ~~---~---~~vl~iGDG~ND~~mlk~AdVG--------------Igi~g~eg~qA~~aaD~~i~~F~~L~~ll 819 (1057)
T TIGR01652 766 ST---G---KTTLAIGDGANDVSMIQEADVG--------------VGISGKEGMQAVMASDFAIGQFRFLTKLL 819 (1057)
T ss_pred cC---C---CeEEEEeCCCccHHHHhhcCee--------------eEecChHHHHHHHhhhhhhhhHHHHHHHH
Confidence 43 2 5699999999999999999864 433 32 3467888887766665555
No 232
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=95.04 E-value=0.028 Score=56.04 Aligned_cols=48 Identities=23% Similarity=0.401 Sum_probs=37.7
Q ss_pred cccccCCHHHHHHHHHhcccceeEecCCccccCCCCCCCCCCHHHHHHHHHh
Q 002955 573 PNFRKLSIDHIVSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNL 624 (863)
Q Consensus 573 ~~f~~l~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L 624 (863)
++|..++.+.- ..++..+|.++||.|+||++. ....++++..+.++++
T Consensus 24 ~si~~I~~~~~--~Lk~~Gik~li~DkDNTL~~~--~~~~i~~~~~~~~~~l 71 (168)
T PF09419_consen 24 PSIRDIDFEAN--HLKKKGIKALIFDKDNTLTPP--YEDEIPPEYAEWLNEL 71 (168)
T ss_pred CChhhCCcchh--hhhhcCceEEEEcCCCCCCCC--CcCcCCHHHHHHHHHH
Confidence 45666666541 135678999999999999975 6788999999999997
No 233
>PLN03190 aminophospholipid translocase; Provisional
Probab=94.93 E-value=0.2 Score=64.78 Aligned_cols=40 Identities=15% Similarity=0.194 Sum_probs=34.2
Q ss_pred CCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc
Q 002955 610 STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 610 ~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l 650 (863)
...+.+.+.+++++| ++.|+.++++||........+...+
T Consensus 724 ~D~lr~~v~~~I~~l-~~agi~v~mlTGD~~~tAi~IA~s~ 763 (1178)
T PLN03190 724 EDKLQQGVPEAIESL-RTAGIKVWVLTGDKQETAISIGYSS 763 (1178)
T ss_pred ecCCchhHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHh
Confidence 456788999999998 8899999999999999888887543
No 234
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=94.86 E-value=0.12 Score=62.66 Aligned_cols=69 Identities=14% Similarity=0.132 Sum_probs=49.2
Q ss_pred HHHHHHHHhcccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc
Q 002955 581 DHIVSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 581 ~~i~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l 650 (863)
+...+.+.+...+.++.-.|++++.----...+-+++.+++++| ++.|++++++||-.......+.+++
T Consensus 410 ~~~~~~~a~~G~~~l~v~~~~~~lG~i~l~Dp~R~~a~e~I~~L-r~~GI~vvMiTGDn~~TA~aIA~el 478 (673)
T PRK14010 410 DALVKGVSKKGGTPLVVLEDNEILGVIYLKDVIKDGLVERFREL-REMGIETVMCTGDNELTAATIAKEA 478 (673)
T ss_pred HHHHHHHHhCCCeEEEEEECCEEEEEEEeecCCcHHHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHHc
Confidence 33444554444565554447777641113456789999999997 8899999999999999999988643
No 235
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=94.86 E-value=0.048 Score=57.12 Aligned_cols=56 Identities=16% Similarity=0.212 Sum_probs=43.0
Q ss_pred ccceeEecCCccccCCCC-----------------------CCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhh---HH
Q 002955 591 KNRAILLDYDGTIMVPGS-----------------------ISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDT---LA 644 (863)
Q Consensus 591 ~~rlI~~DlDGTLl~~~~-----------------------~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~---l~ 644 (863)
.+-+++||+|.|++...+ ....+-+.++++++.+ ++.|+.|+++|||+... ..
T Consensus 76 g~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l-~~~G~~Vf~lTGR~e~~r~~T~ 154 (229)
T TIGR01675 76 GMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKI-IELGIKIFLLSGRWEELRNATL 154 (229)
T ss_pred CCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHH-HHCCCEEEEEcCCChHHHHHHH
Confidence 357899999999997321 1234568899999998 88999999999999765 44
Q ss_pred HHh
Q 002955 645 EWF 647 (863)
Q Consensus 645 ~~~ 647 (863)
+++
T Consensus 155 ~nL 157 (229)
T TIGR01675 155 DNL 157 (229)
T ss_pred HHH
Confidence 444
No 236
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=94.82 E-value=0.19 Score=64.73 Aligned_cols=47 Identities=11% Similarity=0.202 Sum_probs=38.0
Q ss_pred CCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCc
Q 002955 610 STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHG 660 (863)
Q Consensus 610 ~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenG 660 (863)
...+.+++.+++++| ++.|++++++||..........++ +|++..++
T Consensus 654 ~d~lr~~~~~~I~~l-~~agi~v~miTGD~~~TA~~iA~~---~gii~~~~ 700 (1054)
T TIGR01657 654 ENPLKPDTKEVIKEL-KRASIRTVMITGDNPLTAVHVARE---CGIVNPSN 700 (1054)
T ss_pred ecCCCccHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHH---cCCCCCCc
Confidence 345778999999997 889999999999999999998854 45654443
No 237
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=94.71 E-value=2.4 Score=48.01 Aligned_cols=251 Identities=18% Similarity=0.233 Sum_probs=132.4
Q ss_pred hcCCCCCEEEEeCccc--chHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHHhCCEecccCHHHHHHHHH
Q 002955 195 VISPDDDFVWVHDYHL--MVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLS 272 (863)
Q Consensus 195 ~~~p~~D~VwvhDyhl--~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll~~dligF~t~~~~~~Fl~ 272 (863)
..+| |+|..=||.= +-+...+|++.+..|+.++. +|.+|.==++|-..++.. +|.+- -.+.+-..|..
T Consensus 80 ~~~p--d~vIlID~pgFNlrlak~lk~~~~~~~viyYI-----~PqvWAWr~~R~~~i~~~--~D~ll-~ifPFE~~~y~ 149 (373)
T PF02684_consen 80 EEKP--DVVILIDYPGFNLRLAKKLKKRGIPIKVIYYI-----SPQVWAWRPGRAKKIKKY--VDHLL-VIFPFEPEFYK 149 (373)
T ss_pred HcCC--CEEEEeCCCCccHHHHHHHHHhCCCceEEEEE-----CCceeeeCccHHHHHHHH--Hhhee-ECCcccHHHHh
Confidence 3456 7877778872 45678999998888887776 344443335666555553 33321 11112222322
Q ss_pred HHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh--CCCeE--EEeecCccc-c
Q 002955 273 CCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF--KGQIV--MLGVDDMDI-F 347 (863)
Q Consensus 273 ~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~~~v--il~Vdrld~-~ 347 (863)
+.| +-..|-|+.. +|. . ...+.. ...++.+ .++++ +|-=+|-.. .
T Consensus 150 ------------~~g-~~~~~VGHPl--------~d~--~---~~~~~~----~~~~~~~l~~~~~iIaLLPGSR~~EI~ 199 (373)
T PF02684_consen 150 ------------KHG-VPVTYVGHPL--------LDE--V---KPEPDR----AEAREKLLDPDKPIIALLPGSRKSEIK 199 (373)
T ss_pred ------------ccC-CCeEEECCcc--------hhh--h---ccCCCH----HHHHHhcCCCCCcEEEEeCCCCHHHHH
Confidence 111 1234445432 111 1 011111 1112222 33332 333456654 4
Q ss_pred cCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHH
Q 002955 348 KGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIA 427 (863)
Q Consensus 348 KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~a 427 (863)
+.++..++|.+++.+++|+++ ++....+. .....+.+.....+. + .+++.. ..+...
T Consensus 200 rllP~~l~aa~~l~~~~p~l~----fvvp~a~~--------~~~~~i~~~~~~~~~-----~-~~~~~~-----~~~~~~ 256 (373)
T PF02684_consen 200 RLLPIFLEAAKLLKKQRPDLQ----FVVPVAPE--------VHEELIEEILAEYPP-----D-VSIVII-----EGESYD 256 (373)
T ss_pred HHHHHHHHHHHHHHHhCCCeE----EEEecCCH--------HHHHHHHHHHHhhCC-----C-CeEEEc-----CCchHH
Confidence 455888999999999999987 65444322 112222222222211 1 123332 236778
Q ss_pred HHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCC-CCCccEEecccccCcccCCCc-----eEeCCCCHH
Q 002955 428 YYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPST-AKSSMLVVSEFVGCSPSLSGA-----IRVNPWNID 501 (863)
Q Consensus 428 ly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~-~~~g~lVlSe~~G~~~~l~~a-----l~VnP~d~~ 501 (863)
.++.||+.+++| |.+.+|++..+.|. +.. -..++-+ -=.-.+|-..+.|....+-|- ++-+-.+++
T Consensus 257 ~m~~ad~al~~S-----GTaTLE~Al~g~P~--Vv~-Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~ 328 (373)
T PF02684_consen 257 AMAAADAALAAS-----GTATLEAALLGVPM--VVA-YKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPE 328 (373)
T ss_pred HHHhCcchhhcC-----CHHHHHHHHhCCCE--EEE-EcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHH
Confidence 899999999999 88999998885541 000 0000000 000123346677777666442 334456889
Q ss_pred HHHHHHHHHhCCCHH
Q 002955 502 AVAEAMDSALGVSDA 516 (863)
Q Consensus 502 ~~A~ai~~aL~m~~~ 516 (863)
.+++++...|..++.
T Consensus 329 ~i~~~~~~ll~~~~~ 343 (373)
T PF02684_consen 329 NIAAELLELLENPEK 343 (373)
T ss_pred HHHHHHHHHhcCHHH
Confidence 999999999986543
No 238
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=94.67 E-value=0.022 Score=56.52 Aligned_cols=45 Identities=18% Similarity=0.255 Sum_probs=31.4
Q ss_pred ceeEecCCccccCCCCCCC--------C-CCHHHHHHHHHhhcCCCCeEEEEcCC
Q 002955 593 RAILLDYDGTIMVPGSIST--------S-PNAEAVAILDNLCRDPKNVVFLVSGK 638 (863)
Q Consensus 593 rlI~~DlDGTLl~~~~~~~--------~-~s~~~~~aL~~L~~d~g~~V~I~TGR 638 (863)
|+.+||+||||+...+... . ..+.+.++|++| .+.|..++|+|-.
T Consensus 1 Kia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l-~~~Gy~IvIvTNQ 54 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALREL-HKKGYKIVIVTNQ 54 (159)
T ss_dssp SEEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHH-HHTTEEEEEEEE-
T ss_pred CEEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHH-HhcCCeEEEEeCc
Confidence 6899999999997432111 1 345799999998 7788999998854
No 239
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=94.55 E-value=0.05 Score=56.27 Aligned_cols=64 Identities=13% Similarity=0.063 Sum_probs=45.2
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCCc---cccce--ecCCH
Q 002955 756 GVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKP---SKAKY--YLDDT 830 (863)
Q Consensus 756 gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~---s~A~y--~l~d~ 830 (863)
+-.|...++.+ +.. | .+++++||+.||++|++.++. +|++..+| ..|+- .+.+.
T Consensus 130 ~~~K~~~l~~l-~~~---~---~~~v~vGDs~nDl~ml~~Ag~--------------~ia~~ak~~~~~~~~~~~~~~~~ 188 (203)
T TIGR02137 130 KDPKRQSVIAF-KSL---Y---YRVIAAGDSYNDTTMLSEAHA--------------GILFHAPENVIREFPQFPAVHTY 188 (203)
T ss_pred cchHHHHHHHH-Hhh---C---CCEEEEeCCHHHHHHHHhCCC--------------CEEecCCHHHHHhCCCCCcccCH
Confidence 45688888887 444 4 379999999999999999987 45566554 33332 24577
Q ss_pred hHHHHHHHHH
Q 002955 831 AEILRMLLGL 840 (863)
Q Consensus 831 ~eV~~~L~~L 840 (863)
+++++.+..-
T Consensus 189 ~~~~~~~~~~ 198 (203)
T TIGR02137 189 EDLKREFLKA 198 (203)
T ss_pred HHHHHHHHHH
Confidence 7777776654
No 240
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=94.51 E-value=0.0077 Score=60.05 Aligned_cols=68 Identities=13% Similarity=0.098 Sum_probs=45.9
Q ss_pred ecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeC-CCccccceecCCHh
Q 002955 753 KPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVG-QKPSKAKYYLDDTA 831 (863)
Q Consensus 753 ~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG-~~~s~A~y~l~d~~ 831 (863)
+..+-.|+.++..+.+ +.+...++++||+.||++|..-+....+-+ ++.+- ..+..|+||+++..
T Consensus 154 tsdsggKa~~i~~lrk-----~~~~~~~~mvGDGatDlea~~pa~afi~~~---------g~~~r~~vk~nak~~~~~f~ 219 (227)
T KOG1615|consen 154 TSDSGGKAEVIALLRK-----NYNYKTIVMVGDGATDLEAMPPADAFIGFG---------GNVIREGVKANAKWYVTDFY 219 (227)
T ss_pred cccCCccHHHHHHHHh-----CCChheeEEecCCccccccCCchhhhhccC---------CceEcHhhHhccHHHHHHHH
Confidence 4446679999999887 567889999999999999987754432210 11111 13577888877655
Q ss_pred HHH
Q 002955 832 EIL 834 (863)
Q Consensus 832 eV~ 834 (863)
.+.
T Consensus 220 ~L~ 222 (227)
T KOG1615|consen 220 VLG 222 (227)
T ss_pred HHc
Confidence 443
No 241
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=94.41 E-value=0.065 Score=55.08 Aligned_cols=53 Identities=15% Similarity=0.173 Sum_probs=39.1
Q ss_pred CcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC----ccccce-ecCCHhHHHHHHHHHHH
Q 002955 776 LPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKY-YLDDTAEILRMLLGLAE 842 (863)
Q Consensus 776 ~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y-~l~d~~eV~~~L~~L~~ 842 (863)
.++++++|||+.||++|.++++.. |.++.. ...+.+ .+++..++.+.|.....
T Consensus 143 ~~~~~v~iGDs~~D~~~~~aa~~~--------------v~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~~ 200 (205)
T PRK13582 143 LGYRVIAAGDSYNDTTMLGEADAG--------------ILFRPPANVIAEFPQFPAVHTYDELLAAIDKASA 200 (205)
T ss_pred hCCeEEEEeCCHHHHHHHHhCCCC--------------EEECCCHHHHHhCCcccccCCHHHHHHHHHHHHh
Confidence 357899999999999999999852 334432 124455 68899999888776543
No 242
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=94.33 E-value=0.045 Score=56.10 Aligned_cols=42 Identities=17% Similarity=0.127 Sum_probs=37.8
Q ss_pred CCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhh
Q 002955 755 QGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 799 (863)
Q Consensus 755 ~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 799 (863)
.+-.|...++.++++. +++++.++++||+.+|++|++.++..
T Consensus 152 ~g~~K~~~l~~~~~~~---~~~~~~~~~~gDs~~D~~~~~~a~~~ 193 (202)
T TIGR01490 152 KGEGKVHALAELLAEE---QIDLKDSYAYGDSISDLPLLSLVGHP 193 (202)
T ss_pred CChHHHHHHHHHHHHc---CCCHHHcEeeeCCcccHHHHHhCCCc
Confidence 4567888899999887 99999999999999999999999974
No 243
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=94.30 E-value=2 Score=48.01 Aligned_cols=292 Identities=16% Similarity=0.146 Sum_probs=145.4
Q ss_pred hhHHHHHHHHHHHHHHHHhhcCCCCCEEEEeCcc--cchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHH
Q 002955 176 SLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYH--LMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRAL 253 (863)
Q Consensus 176 ~~w~~Y~~vN~~fa~~i~~~~~p~~D~VwvhDyh--l~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~l 253 (863)
..|+.|.+.=+.+ .+ -+| |++..=|+- =..|...||+..|++||..+.- ||-=.|| |.|...+..
T Consensus 69 ~llk~~~~~~~~i----~~-~kp--D~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~---PsVWAWr--~~Ra~~i~~- 135 (381)
T COG0763 69 RLLKIRRELVRYI----LA-NKP--DVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVS---PSVWAWR--PKRAVKIAK- 135 (381)
T ss_pred HHHHHHHHHHHHH----Hh-cCC--CEEEEeCCCCCchHHHHHHHHhCCCCCeEEEEC---cceeeec--hhhHHHHHH-
Confidence 4566665544333 22 245 777776765 3457889999999999998872 3322222 444333332
Q ss_pred HhCCEecccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh-
Q 002955 254 LNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF- 332 (863)
Q Consensus 254 l~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~- 332 (863)
.+|++.--.+.- ..|.+. .|+. ..|-|++.. |.-.+. +. .+..|+++
T Consensus 136 -~~D~lLailPFE-~~~y~k----~g~~---------~~yVGHpl~--------d~i~~~-----~~----r~~ar~~l~ 183 (381)
T COG0763 136 -YVDHLLAILPFE-PAFYDK----FGLP---------CTYVGHPLA--------DEIPLL-----PD----REAAREKLG 183 (381)
T ss_pred -HhhHeeeecCCC-HHHHHh----cCCC---------eEEeCChhh--------hhcccc-----cc----HHHHHHHhC
Confidence 245443211111 112210 1111 234444321 111111 11 12244444
Q ss_pred ---CCCeEEEee--cCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCC
Q 002955 333 ---KGQIVMLGV--DDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGR 407 (863)
Q Consensus 333 ---~~~~vil~V--drld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~ 407 (863)
..+.+.+-- -|=+...-++-.++|++++.+++|+++ ++.-..+ +.++.++.+.. +.-
T Consensus 184 ~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~----~vlp~~~-----~~~~~~~~~~~---~~~------ 245 (381)
T COG0763 184 IDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLK----FVLPLVN-----AKYRRIIEEAL---KWE------ 245 (381)
T ss_pred CCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCce----EEEecCc-----HHHHHHHHHHh---hcc------
Confidence 344443333 334556667778899999999999988 5544332 23333333321 111
Q ss_pred CCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCC-CCccEEecccccCc
Q 002955 408 PGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTA-KSSMLVVSEFVGCS 486 (863)
Q Consensus 408 ~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~-~~g~lVlSe~~G~~ 486 (863)
...+.++ +...+....+.+||+.+..| |.+.+|++.|+.|.- .. -..++-.- =.-.+|-.-+++..
T Consensus 246 -~~~~~~~----~~~~~~~~a~~~aD~al~aS-----GT~tLE~aL~g~P~V--v~-Yk~~~it~~iak~lvk~~yisLp 312 (381)
T COG0763 246 -VAGLSLI----LIDGEKRKAFAAADAALAAS-----GTATLEAALAGTPMV--VA-YKVKPITYFIAKRLVKLPYVSLP 312 (381)
T ss_pred -ccCceEE----ecCchHHHHHHHhhHHHHhc-----cHHHHHHHHhCCCEE--EE-EeccHHHHHHHHHhccCCcccch
Confidence 0011122 23457888899999999999 889999999955410 00 00000000 00012223344444
Q ss_pred ccCCCceEeC-----CCCHHHHHHHHHHHhCCCHH--HHHHHHHHHhhhhccCCHHHHHHHHHH
Q 002955 487 PSLSGAIRVN-----PWNIDAVAEAMDSALGVSDA--EKQMRHEKHYRYVSTHDVAYWARSFLQ 543 (863)
Q Consensus 487 ~~l~~al~Vn-----P~d~~~~A~ai~~aL~m~~~--er~~r~~~~~~~v~~~~~~~W~~~~l~ 543 (863)
..+.|--+|+ -..++.+|+++...+..+.. +..+....+++++.+..+..-+.+.+-
T Consensus 313 NIi~~~~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~~~~l~~~l~~~~~~e~aA~~vl 376 (381)
T COG0763 313 NILAGREIVPELIQEDCTPENLARALEELLLNGDRREALKEKFRELHQYLREDPASEIAAQAVL 376 (381)
T ss_pred HHhcCCccchHHHhhhcCHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHcCCcHHHHHHHHHH
Confidence 4443322221 13468999999999986622 233345556666666535554444443
No 244
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=94.13 E-value=0.49 Score=58.79 Aligned_cols=165 Identities=17% Similarity=0.202 Sum_probs=98.0
Q ss_pred HHhcccceeEecC---Cc--cccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcE
Q 002955 587 YKRTKNRAILLDY---DG--TIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGY 661 (863)
Q Consensus 587 y~~s~~rlI~~Dl---DG--TLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa 661 (863)
+.....|.+++=+ ++ +++.--.-...+-+++.++++++ ++.|+.++++||........+.+++ |+.. +
T Consensus 412 ~~~~G~rvl~vA~~~~e~~l~~~Gli~l~Dp~R~~a~~aI~~l-~~aGI~v~miTGD~~~tA~~IA~~l---GI~~-~-- 484 (755)
T TIGR01647 412 LASRGYRALGVARTDEEGRWHFLGLLPLFDPPRHDTKETIERA-RHLGVEVKMVTGDHLAIAKETARRL---GLGT-N-- 484 (755)
T ss_pred HHhCCCEEEEEEEEcCCCCcEEEEEeeccCCChhhHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHHc---CCCC-C--
Confidence 3334456666644 33 55432123456789999999997 8899999999999999999998654 4421 0
Q ss_pred EEEeCCceeEEeecCCCCccHHHHHHHHHHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcCCCe
Q 002955 662 FVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPV 741 (863)
Q Consensus 662 ~I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~~ 741 (863)
+. .+ ..+ .+ |.. ....+ ..+ +.+.+.+.
T Consensus 485 -~~-~~-------------------~~l----~~---~~~-----------~~~~~-------~~~----~~~~~~~~-- 512 (755)
T TIGR01647 485 -IY-TA-------------------DVL----LK---GDN-----------RDDLP-------SGE----LGEMVEDA-- 512 (755)
T ss_pred -Cc-CH-------------------HHh----cC---Ccc-----------hhhCC-------HHH----HHHHHHhC--
Confidence 00 00 000 00 000 00000 112 22222221
Q ss_pred EEEECCcEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCC---
Q 002955 742 SVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ--- 818 (863)
Q Consensus 742 ~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~--- 818 (863)
.-+-++.|. .|...++.+.++ | .-|.++||+.||.+.|+.++. ++++|.
T Consensus 513 -----~vfAr~~Pe--~K~~iV~~lq~~----G---~~VamvGDGvNDapAL~~AdV--------------GIAm~~gtd 564 (755)
T TIGR01647 513 -----DGFAEVFPE--HKYEIVEILQKR----G---HLVGMTGDGVNDAPALKKADV--------------GIAVAGATD 564 (755)
T ss_pred -----CEEEecCHH--HHHHHHHHHHhc----C---CEEEEEcCCcccHHHHHhCCe--------------eEEecCCcH
Confidence 234566675 588888876543 4 469999999999999999985 566664
Q ss_pred -Cccccceec--CCHhHHHHHHH
Q 002955 819 -KPSKAKYYL--DDTAEILRMLL 838 (863)
Q Consensus 819 -~~s~A~y~l--~d~~eV~~~L~ 838 (863)
.+..|+.++ ++...+...++
T Consensus 565 vAkeaADivLl~d~l~~I~~ai~ 587 (755)
T TIGR01647 565 AARSAADIVLTEPGLSVIVDAIL 587 (755)
T ss_pred HHHHhCCEEEEcCChHHHHHHHH
Confidence 256677776 34555554443
No 245
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=94.09 E-value=0.34 Score=61.27 Aligned_cols=136 Identities=15% Similarity=0.186 Sum_probs=85.9
Q ss_pred CCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcEEEEeCCceeEEeecCCCCccHHHHHHHH
Q 002955 610 STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPV 689 (863)
Q Consensus 610 ~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa~I~~~~~~~w~~~~~~~~~~w~~~v~~i 689 (863)
..+|-+++.++++++ ++.|+.++++||-.......+.+++ |+. ++ . .+.. .+
T Consensus 548 ~Dp~R~~a~~aI~~l-~~aGI~v~miTGD~~~tA~~IA~~l---GI~--~~--------~----v~~G---------~e- 599 (902)
T PRK10517 548 LDPPKETTAPALKAL-KASGVTVKILTGDSELVAAKVCHEV---GLD--AG--------E----VLIG---------SD- 599 (902)
T ss_pred hCcchhhHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHc---CCC--cc--------C----ceeH---------HH-
Confidence 446778999999997 8899999999999999999988644 441 10 0 0000 00
Q ss_pred HHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHH
Q 002955 690 MKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLET 769 (863)
Q Consensus 690 ~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~ 769 (863)
++. .+ .++ +.+.+.+. .-+-++.|. +|...++.+.++
T Consensus 600 l~~-----------------------l~-------~~e----l~~~~~~~-------~VfAr~sPe--~K~~IV~~Lq~~ 636 (902)
T PRK10517 600 IET-----------------------LS-------DDE----LANLAERT-------TLFARLTPM--HKERIVTLLKRE 636 (902)
T ss_pred HHh-----------------------CC-------HHH----HHHHHhhC-------cEEEEcCHH--HHHHHHHHHHHC
Confidence 000 00 011 22222221 234456664 588888876543
Q ss_pred HhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCC----Cccccceec--CCHhHHHHHH
Q 002955 770 MHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ----KPSKAKYYL--DDTAEILRML 837 (863)
Q Consensus 770 l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~----~~s~A~y~l--~d~~eV~~~L 837 (863)
| .-|.++||+.||-++++.|+. ++++|. .+..|+.++ ++...+.+.+
T Consensus 637 ----G---~vVam~GDGvNDaPALk~ADV--------------GIAmg~gtdvAkeaADiVLldd~~~~I~~ai 689 (902)
T PRK10517 637 ----G---HVVGFMGDGINDAPALRAADI--------------GISVDGAVDIAREAADIILLEKSLMVLEEGV 689 (902)
T ss_pred ----C---CEEEEECCCcchHHHHHhCCE--------------EEEeCCcCHHHHHhCCEEEecCChHHHHHHH
Confidence 4 569999999999999999985 666764 257788877 3444444443
No 246
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=94.08 E-value=0.4 Score=56.37 Aligned_cols=65 Identities=23% Similarity=0.319 Sum_probs=46.3
Q ss_pred CCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCC----CccccceecCCHhH
Q 002955 757 VNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ----KPSKAKYYLDDTAE 832 (863)
Q Consensus 757 vsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~----~~s~A~y~l~d~~e 832 (863)
.-|+..++.|.++- | ..|.||||+.||..|.+.++.++ ++ +|+ +.-+|+|-+....-
T Consensus 767 tQKA~v~~llq~~t---~---krvc~IGDGGNDVsMIq~A~~Gi------------GI-~gkEGkQASLAADfSItqF~H 827 (1051)
T KOG0210|consen 767 TQKAQVVRLLQKKT---G---KRVCAIGDGGNDVSMIQAADVGI------------GI-VGKEGKQASLAADFSITQFSH 827 (1051)
T ss_pred hHHHHHHHHHHHhh---C---ceEEEEcCCCccchheeecccce------------ee-ecccccccchhccccHHHHHH
Confidence 45888888777764 4 67999999999999999987642 33 332 24567777766666
Q ss_pred HHHHHHHH
Q 002955 833 ILRMLLGL 840 (863)
Q Consensus 833 V~~~L~~L 840 (863)
|-++|-..
T Consensus 828 v~rLLl~H 835 (1051)
T KOG0210|consen 828 VSRLLLWH 835 (1051)
T ss_pred HHHHhhcc
Confidence 66666543
No 247
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=94.02 E-value=0.085 Score=51.86 Aligned_cols=56 Identities=14% Similarity=0.281 Sum_probs=41.8
Q ss_pred eeEecCCccccCCC------C--CCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChh---hHHHHhhcc
Q 002955 594 AILLDYDGTIMVPG------S--ISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRD---TLAEWFSSC 650 (863)
Q Consensus 594 lI~~DlDGTLl~~~------~--~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~---~l~~~~~~l 650 (863)
++++|+||||+... + ......+.+.+..+++ +++|..++-+|+|+.. ..+.|+...
T Consensus 1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i-~~~GY~ilYlTaRp~~qa~~Tr~~L~~~ 67 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKI-ADNGYKILYLTARPIGQANRTRSWLAQH 67 (157)
T ss_pred CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHH-HHCCeEEEEECcCcHHHHHHHHHHHHHH
Confidence 58999999999731 0 0113567888999998 8899999999999964 455666544
No 248
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=93.93 E-value=0.41 Score=60.38 Aligned_cols=137 Identities=15% Similarity=0.153 Sum_probs=85.6
Q ss_pred CCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcEEEEeCCceeEEeecCCCCccHHHHHHHH
Q 002955 610 STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPV 689 (863)
Q Consensus 610 ~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa~I~~~~~~~w~~~~~~~~~~w~~~v~~i 689 (863)
...+-+++.++++++ ++.|++++++||-.......+.++ +|+..+ . .+...+
T Consensus 513 ~Dp~R~~~~~aI~~l-~~aGI~vvmiTGD~~~tA~aIA~~---lGI~~~----------~----v~~g~~---------- 564 (867)
T TIGR01524 513 LDPPKESTKEAIAAL-FKNGINVKVLTGDNEIVTARICQE---VGIDAN----------D----FLLGAD---------- 564 (867)
T ss_pred eCCCchhHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHH---cCCCCC----------C----eeecHh----------
Confidence 346789999999997 999999999999999999888864 344210 0 000000
Q ss_pred HHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHH
Q 002955 690 MKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLET 769 (863)
Q Consensus 690 ~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~ 769 (863)
++. .+ ..++ .+.+.+ ..-+-.+.|. .|...++.+.++
T Consensus 565 l~~-----------------------~~-------~~el----~~~~~~-------~~vfAr~~Pe--~K~~iV~~lq~~ 601 (867)
T TIGR01524 565 IEE-----------------------LS-------DEEL----ARELRK-------YHIFARLTPM--QKSRIIGLLKKA 601 (867)
T ss_pred hhh-----------------------CC-------HHHH----HHHhhh-------CeEEEECCHH--HHHHHHHHHHhC
Confidence 000 00 0111 112221 1124455564 588888876543
Q ss_pred HhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCC----Cccccceec--CCHhHHHHHHH
Q 002955 770 MHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ----KPSKAKYYL--DDTAEILRMLL 838 (863)
Q Consensus 770 l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~----~~s~A~y~l--~d~~eV~~~L~ 838 (863)
| ..|.++||+.||.++++.|+. ++++|. .+..|+.++ ++...+...+.
T Consensus 602 ----G---~vVam~GDGvNDapALk~AdV--------------GIAmg~gtdvAk~aADiVLldd~~~~I~~ai~ 655 (867)
T TIGR01524 602 ----G---HTVGFLGDGINDAPALRKADV--------------GISVDTAADIAKEASDIILLEKSLMVLEEGVI 655 (867)
T ss_pred ----C---CEEEEECCCcccHHHHHhCCE--------------EEEeCCccHHHHHhCCEEEecCChHHHHHHHH
Confidence 4 469999999999999999985 666764 357788876 34455544443
No 249
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=93.90 E-value=0.48 Score=60.00 Aligned_cols=137 Identities=16% Similarity=0.198 Sum_probs=87.4
Q ss_pred CCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEccCcEEEEeCCceeEEeecCCCCccHHHHHHHH
Q 002955 610 STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPV 689 (863)
Q Consensus 610 ~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~liaenGa~I~~~~~~~w~~~~~~~~~~w~~~v~~i 689 (863)
...+-+++.++++++ ++.|+.++++||-.......+.+++ |+. ++.. +...+
T Consensus 548 ~Dp~R~~a~~aI~~l-~~aGI~v~miTGD~~~tA~aIA~~l---GI~--~~~v------------i~G~e---------- 599 (903)
T PRK15122 548 LDPPKESAAPAIAAL-RENGVAVKVLTGDNPIVTAKICREV---GLE--PGEP------------LLGTE---------- 599 (903)
T ss_pred cCccHHHHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHHc---CCC--CCCc------------cchHh----------
Confidence 456779999999996 9999999999999999999998643 441 1100 00000
Q ss_pred HHHHhhcCCCceeeeccceeEeecccCCCCcchhhHHHHHHHHHHHhcCCCeEEEECCcEEEEecCCCCHHHHHHHHHHH
Q 002955 690 MKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLET 769 (863)
Q Consensus 690 ~~~y~~~~~gs~ie~k~~~l~~~y~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~ 769 (863)
++. .+ .++ +.+.+.+ ..-+-++.|. .|...++.+.++
T Consensus 600 l~~-----------------------~~-------~~e----l~~~v~~-------~~VfAr~sPe--~K~~iV~~Lq~~ 636 (903)
T PRK15122 600 IEA-----------------------MD-------DAA----LAREVEE-------RTVFAKLTPL--QKSRVLKALQAN 636 (903)
T ss_pred hhh-----------------------CC-------HHH----HHHHhhh-------CCEEEEeCHH--HHHHHHHHHHhC
Confidence 000 00 011 2222222 1234556674 588888877553
Q ss_pred HhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCC----Cccccceec--CCHhHHHHHHH
Q 002955 770 MHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ----KPSKAKYYL--DDTAEILRMLL 838 (863)
Q Consensus 770 l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~----~~s~A~y~l--~d~~eV~~~L~ 838 (863)
| +-|.++||+.||-++++.|+. ++++|. .+..|+.++ +|...+...++
T Consensus 637 ----G---~vVamtGDGvNDaPALk~ADV--------------GIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~ 690 (903)
T PRK15122 637 ----G---HTVGFLGDGINDAPALRDADV--------------GISVDSGADIAKESADIILLEKSLMVLEEGVI 690 (903)
T ss_pred ----C---CEEEEECCCchhHHHHHhCCE--------------EEEeCcccHHHHHhcCEEEecCChHHHHHHHH
Confidence 4 569999999999999999975 666764 367788887 34555544443
No 250
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=93.86 E-value=0.1 Score=55.68 Aligned_cols=65 Identities=15% Similarity=0.168 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHhhcCCC-cceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC------------------
Q 002955 759 KGLVAQHQLETMHQKGML-PDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------------------ 819 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~-~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------------------ 819 (863)
+.......++++ |+. ++++++|||+.+|+.+-+.+|.. +++|..|..
T Consensus 158 ~p~~~~~a~~~l---~~~~~~~~l~IGDs~~Di~aA~~aGi~-----------~i~v~~g~~~~~~~~~~~~~~~~~~~~ 223 (253)
T TIGR01422 158 APWMALKNAIEL---GVYDVAACVKVGDTVPDIEEGRNAGMW-----------TVGLILSSNELGLSEEEYRALDPAELE 223 (253)
T ss_pred CHHHHHHHHHHc---CCCCchheEEECCcHHHHHHHHHCCCe-----------EEEEecCCcccCCCHHHHHhCCHHHHH
Confidence 466778888888 985 99999999999999999999973 477877742
Q ss_pred -----------ccccceecCCHhHHHHHH
Q 002955 820 -----------PSKAKYYLDDTAEILRML 837 (863)
Q Consensus 820 -----------~s~A~y~l~d~~eV~~~L 837 (863)
...|++++++..++..+|
T Consensus 224 ~~~~~~~~~l~~~~~~~v~~~~~el~~~~ 252 (253)
T TIGR01422 224 ARRAEATARLKAAGAHYVIDTLAELPAVI 252 (253)
T ss_pred HHHHHHHHHHHhcCCCEehhcHHHHHHhh
Confidence 245788888888876654
No 251
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=93.70 E-value=0.086 Score=53.05 Aligned_cols=56 Identities=21% Similarity=0.200 Sum_probs=43.5
Q ss_pred cceeEecCCccccCCCC-------C----------------CCCCCHHHHHHHHHhhcCCCCeEEEEcCC-ChhhHHHHh
Q 002955 592 NRAILLDYDGTIMVPGS-------I----------------STSPNAEAVAILDNLCRDPKNVVFLVSGK-DRDTLAEWF 647 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~~-------~----------------~~~~s~~~~~aL~~L~~d~g~~V~I~TGR-~~~~l~~~~ 647 (863)
.|+++||+|+||.++.. . ...+-+.+.+.|+.| +++|..++|+|+. ....+...+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~L-k~~G~~l~I~Sn~~~~~~~~~~L 80 (174)
T TIGR01685 2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTL-KDAGTYLATASWNDVPEWAYEIL 80 (174)
T ss_pred CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHH-HHCCCEEEEEeCCCChHHHHHHH
Confidence 58999999999997431 0 012347889999998 7889999999988 777777766
Q ss_pred h
Q 002955 648 S 648 (863)
Q Consensus 648 ~ 648 (863)
.
T Consensus 81 ~ 81 (174)
T TIGR01685 81 G 81 (174)
T ss_pred H
Confidence 4
No 252
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=93.48 E-value=0.015 Score=57.10 Aligned_cols=99 Identities=15% Similarity=0.269 Sum_probs=46.8
Q ss_pred HHHHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCCh-----HHHHHH-HHhCCEecccC
Q 002955 190 DKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIR-----DELLRA-LLNADLIGFHT 263 (863)
Q Consensus 190 ~~i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r-----~eil~~-ll~~dligF~t 263 (863)
.++++..+| |+|++|.++...+...-.. +.++.+++|.+++.........+. ..+.+. .-.+|.+-.-+
T Consensus 73 ~~~i~~~~~--DiVh~~~~~~~~~~~~~~~---~~~~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~vS 147 (177)
T PF13439_consen 73 RRLIKKEKP--DIVHIHGPPAFWIALLACR---KVPIVYTIHGPYFERRFLKSKLSPYSYLNFRIERKLYKKADRIIAVS 147 (177)
T ss_dssp HHHHHHHT---SEEECCTTHCCCHHHHHHH---CSCEEEEE-HHH--HHTTTTSCCCHHHHHHCTTHHHHCCSSEEEESS
T ss_pred HHHHHHcCC--CeEEecccchhHHHHHhcc---CCCEEEEeCCCcccccccccccchhhhhhhhhhhhHHhcCCEEEEEC
Confidence 334444466 9999999887765443322 789999999887531111111111 111111 23467665545
Q ss_pred HHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHH
Q 002955 264 FDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQ 313 (863)
Q Consensus 264 ~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~ 313 (863)
..-++.+.+ .|+ ...++.++|+|||.+.|+
T Consensus 148 ~~~~~~l~~-----~~~---------------~~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 148 ESTKDELIK-----FGI---------------PPEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp HHHHHHHHH-----HT-----------------SS-EEE----B-CCCH-
T ss_pred HHHHHHHHH-----hCC---------------cccCCEEEECCccHHHcC
Confidence 444433332 122 124678899999998874
No 253
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=93.35 E-value=0.078 Score=57.00 Aligned_cols=53 Identities=28% Similarity=0.364 Sum_probs=39.5
Q ss_pred ccceeEecCCccccCCCC-------C----------------CCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHH
Q 002955 591 KNRAILLDYDGTIMVPGS-------I----------------STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLA 644 (863)
Q Consensus 591 ~~rlI~~DlDGTLl~~~~-------~----------------~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~ 644 (863)
+..+|++|+|+|+++..+ . ...+-+.+.+.|+.| .+.|..++++|+|+.....
T Consensus 74 kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L-~~~G~~v~iVTnR~~~~~~ 149 (266)
T TIGR01533 74 KKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYA-NSKGVKIFYVSNRSEKEKA 149 (266)
T ss_pred CCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHH-HHCCCeEEEEeCCCcchHH
Confidence 457999999999996321 0 112346778899998 7889999999999855444
No 254
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=93.11 E-value=0.38 Score=56.90 Aligned_cols=58 Identities=14% Similarity=0.143 Sum_probs=39.8
Q ss_pred cceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc
Q 002955 592 NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l 650 (863)
.+.+++=+|++++..-.....+.+.+.++++.| ++.|+.++++||............+
T Consensus 327 ~~~~~~a~~~~~~g~i~l~d~lr~~~~~~i~~l-~~~gi~~~~ltGD~~~~a~~ia~~l 384 (499)
T TIGR01494 327 LRVLAVASKETLLGLLGLEDPLRDDAKETISEL-REAGIRVIMLTGDNVLTAKAIAKEL 384 (499)
T ss_pred CEEEEEEECCeEEEEEEecCCCchhHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHc
Confidence 344444455555531112445667888888887 6689999999999999988888644
No 255
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=92.93 E-value=0.46 Score=61.06 Aligned_cols=40 Identities=13% Similarity=0.178 Sum_probs=34.9
Q ss_pred CCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc
Q 002955 610 STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 610 ~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l 650 (863)
...+-+++.++++++ ++.|++|+++||........+..++
T Consensus 644 ~Dp~r~~v~~aI~~l-~~aGIkv~MiTGD~~~tA~~iA~~~ 683 (1053)
T TIGR01523 644 YDPPRNESAGAVEKC-HQAGINVHMLTGDFPETAKAIAQEV 683 (1053)
T ss_pred ecCCchhHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHc
Confidence 456788999999996 9999999999999999999998643
No 256
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=92.92 E-value=0.13 Score=55.02 Aligned_cols=50 Identities=18% Similarity=0.251 Sum_probs=38.4
Q ss_pred cceeEecCCccccCCCC-----------------C-------CCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhh
Q 002955 592 NRAILLDYDGTIMVPGS-----------------I-------STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDT 642 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~~-----------------~-------~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~ 642 (863)
.-+++||+|+|++...+ . ...+-+.+++.++.+ ++.|..|+++|||+...
T Consensus 101 ~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l-~~~G~kIf~VSgR~e~~ 174 (275)
T TIGR01680 101 KDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKL-VSLGFKIIFLSGRLKDK 174 (275)
T ss_pred CCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHH-HHCCCEEEEEeCCchhH
Confidence 47999999999994110 1 223457888899997 88999999999998654
No 257
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=92.84 E-value=0.68 Score=58.73 Aligned_cols=41 Identities=20% Similarity=0.457 Sum_probs=35.5
Q ss_pred CCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc
Q 002955 609 ISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 609 ~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l 650 (863)
...+|-+++.++++.+ ++.|++++++||-.......+..++
T Consensus 544 ~~Dppr~~v~~aI~~l-~~AGI~v~MiTGD~~~TA~aIa~~~ 584 (917)
T COG0474 544 IEDPPREDVKEAIEEL-REAGIKVWMITGDHVETAIAIAKEC 584 (917)
T ss_pred ccCCCCccHHHHHHHH-HHCCCcEEEECCCCHHHHHHHHHHc
Confidence 3456778999999996 8999999999999999999998755
No 258
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=92.69 E-value=3 Score=45.82 Aligned_cols=168 Identities=16% Similarity=0.219 Sum_probs=107.0
Q ss_pred CCeEEEeecCcccccCHHHHHHHHHHHHHhC---CCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCc
Q 002955 334 GQIVMLGVDDMDIFKGISLKLLAMEQLLSQN---PSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGY 410 (863)
Q Consensus 334 ~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~---p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~ 410 (863)
...++++--...+...+.-+|.|.+.+-++. +.---++ |.+|+ |.||..+.+.++|++. +|
T Consensus 254 ~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~l-lciIT----GKGPlkE~Y~~~I~~~-----------~~ 317 (444)
T KOG2941|consen 254 RPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSL-LCIIT----GKGPLKEKYSQEIHEK-----------NL 317 (444)
T ss_pred CCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcE-EEEEc----CCCchhHHHHHHHHHh-----------cc
Confidence 4578888888999999999999987542211 1000122 33344 4677777777777654 67
Q ss_pred ccEEEEcCCCCHHHHHHHHHhccc--eeecccccCCCccce--eeeeeecCCcccccccCCCCCCCCCccEEecccccCc
Q 002955 411 QPVVLIDTPLQFYERIAYYVIAEC--CLVTAVRDGMNLIPY--EYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCS 486 (863)
Q Consensus 411 ~pv~~~~~~v~~~el~aly~~ADv--~vvtS~~EGmnLv~~--Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~ 486 (863)
+.|.+..--++-++.+.++..||. |+=||. -|.-|..+ ..--| +-|+++-.|. |-
T Consensus 318 ~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSS-SGLDLPMKVVDMFGc-------------------glPvcA~~fk-cl 376 (444)
T KOG2941|consen 318 QHVQVCTPWLEAEDYPKLLASADLGVCLHTSS-SGLDLPMKVVDMFGC-------------------GLPVCAVNFK-CL 376 (444)
T ss_pred cceeeeecccccccchhHhhccccceEeeecC-cccCcchhHHHhhcC-------------------CCceeeecch-hH
Confidence 778888888999999999999996 555653 45555422 22233 3345555555 44
Q ss_pred ccC----CCceEeCCCCHHHHHHHHHHHhCC---CHHHHHHHHHHHhhhhccCCHHHHHHHHHHH
Q 002955 487 PSL----SGAIRVNPWNIDAVAEAMDSALGV---SDAEKQMRHEKHYRYVSTHDVAYWARSFLQD 544 (863)
Q Consensus 487 ~~l----~~al~VnP~d~~~~A~ai~~aL~m---~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~ 544 (863)
.+| .+|++++ |-+++|+.|..+.+. +..+-. +..+-+.+....+|..++-+.
T Consensus 377 ~ELVkh~eNGlvF~--Ds~eLa~ql~~lf~~fp~~a~~l~----~lkkn~~e~~e~RW~~~W~~~ 435 (444)
T KOG2941|consen 377 DELVKHGENGLVFE--DSEELAEQLQMLFKNFPDNADELN----QLKKNLREEQELRWDESWERT 435 (444)
T ss_pred HHHHhcCCCceEec--cHHHHHHHHHHHHhcCCCCHHHHH----HHHHhhHHHHhhhHHHHHHHh
Confidence 444 4699986 899999999999873 222211 233333444557787766443
No 259
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=92.54 E-value=1.5 Score=50.26 Aligned_cols=139 Identities=13% Similarity=0.104 Sum_probs=79.5
Q ss_pred CeEEEeecC-cccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhh---------c
Q 002955 335 QIVMLGVDD-MDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINK---------I 404 (863)
Q Consensus 335 ~~vil~Vdr-ld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~---------~ 404 (863)
..++++-.| -+..++++..++|++++.++ |+++ ++....+. .+++.+++.+.+. .++. .
T Consensus 207 ~lllLpGSR~ae~~~~lp~~l~al~~L~~~-~~~~----~v~~~~~~----~~~~~~~~~l~~~--g~~~~~~~~~~~~~ 275 (396)
T TIGR03492 207 RIALLPGSRPPEAYRNLKLLLRALEALPDS-QPFV----FLAAIVPS----LSLEKLQAILEDL--GWQLEGSSEDQTSL 275 (396)
T ss_pred EEEEECCCCHHHHHccHHHHHHHHHHHhhC-CCeE----EEEEeCCC----CCHHHHHHHHHhc--CceecCCccccchh
Confidence 345677778 55667888999999998655 5443 55444332 2334444333211 0000 0
Q ss_pred cCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEeccccc
Q 002955 405 FGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVG 484 (863)
Q Consensus 405 ~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G 484 (863)
|. ...+.++. ...+..++|+.||++|..| |-+..|+++++.| .|+--+.+
T Consensus 276 ~~---~~~~~v~~---~~~~~~~~l~~ADlvI~rS-----Gt~T~E~a~lg~P-------------------~Ilip~~~ 325 (396)
T TIGR03492 276 FQ---KGTLEVLL---GRGAFAEILHWADLGIAMA-----GTATEQAVGLGKP-------------------VIQLPGKG 325 (396)
T ss_pred hc---cCceEEEe---chHhHHHHHHhCCEEEECc-----CHHHHHHHHhCCC-------------------EEEEeCCC
Confidence 00 01122221 2457889999999999886 3455999988543 33322111
Q ss_pred C------ccc---C-CCceEeCCCCHHHHHHHHHHHhCCC
Q 002955 485 C------SPS---L-SGAIRVNPWNIDAVAEAMDSALGVS 514 (863)
Q Consensus 485 ~------~~~---l-~~al~VnP~d~~~~A~ai~~aL~m~ 514 (863)
- .+. + .+++.+...+.+.+++++.++|+.+
T Consensus 326 ~q~na~~~~~~~~l~g~~~~l~~~~~~~l~~~l~~ll~d~ 365 (396)
T TIGR03492 326 PQFTYGFAEAQSRLLGGSVFLASKNPEQAAQVVRQLLADP 365 (396)
T ss_pred CHHHHHHHHhhHhhcCCEEecCCCCHHHHHHHHHHHHcCH
Confidence 1 011 1 3455555677899999999998753
No 260
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=92.31 E-value=0.13 Score=60.63 Aligned_cols=50 Identities=18% Similarity=0.151 Sum_probs=38.6
Q ss_pred cccceeEecCCccccCCCCCC---------CCCCHHHHHHHHHhhcCCCCeEEEEcCCCh
Q 002955 590 TKNRAILLDYDGTIMVPGSIS---------TSPNAEAVAILDNLCRDPKNVVFLVSGKDR 640 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~~~~---------~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~ 640 (863)
...|+++||+||||+...+.. ..+.+.+.+.|++| .+.|..++|+|..+.
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L-~~~Gy~IvIvTNQ~g 224 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKEL-EADGFKICIFTNQGG 224 (526)
T ss_pred ccCcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHH-HHCCCEEEEEECCcc
Confidence 346999999999999743211 11457889999999 889999999998655
No 261
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=91.97 E-value=1.6 Score=44.44 Aligned_cols=61 Identities=25% Similarity=0.377 Sum_probs=45.4
Q ss_pred cccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceE
Q 002955 590 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGI 655 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~l 655 (863)
+.++-+++|+-|||-. .+. .-+...++|++| ++++..|=++|.-+.++-..+.+++.++++
T Consensus 5 ~~v~gvLlDlSGtLh~---e~~-avpga~eAl~rL-r~~~~kVkFvTNttk~Sk~~l~~rL~rlgf 65 (262)
T KOG3040|consen 5 RAVKGVLLDLSGTLHI---EDA-AVPGAVEALKRL-RDQHVKVKFVTNTTKESKRNLHERLQRLGF 65 (262)
T ss_pred cccceEEEeccceEec---ccc-cCCCHHHHHHHH-HhcCceEEEEecCcchhHHHHHHHHHHhCC
Confidence 4578899999999987 333 567888999999 888899999887776665555554444444
No 262
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=91.45 E-value=12 Score=42.39 Aligned_cols=72 Identities=11% Similarity=0.098 Sum_probs=47.1
Q ss_pred EEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccC----cccC-
Q 002955 415 LIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGC----SPSL- 489 (863)
Q Consensus 415 ~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~----~~~l- 489 (863)
.+.+.+++.+ ++..||++| .+-|+| +..|+++++. |+|+.-+.+- +..+
T Consensus 291 ~~~~~~p~~~---ll~~~d~~I---~hgG~~-t~~eal~~Gv-------------------P~v~~P~~~dQ~~~a~~~~ 344 (401)
T cd03784 291 RVVDFVPHDW---LLPRCAAVV---HHGGAG-TTAAALRAGV-------------------PQLVVPFFGDQPFWAARVA 344 (401)
T ss_pred EEeCCCCHHH---Hhhhhheee---ecCCch-hHHHHHHcCC-------------------CEEeeCCCCCcHHHHHHHH
Confidence 4556677655 477799998 466765 6689999944 3444433331 1122
Q ss_pred --CCceEeCCC--CHHHHHHHHHHHhC
Q 002955 490 --SGAIRVNPW--NIDAVAEAMDSALG 512 (863)
Q Consensus 490 --~~al~VnP~--d~~~~A~ai~~aL~ 512 (863)
.-|+.+++. +.+++++++.++|+
T Consensus 345 ~~G~g~~l~~~~~~~~~l~~al~~~l~ 371 (401)
T cd03784 345 ELGAGPALDPRELTAERLAAALRRLLD 371 (401)
T ss_pred HCCCCCCCCcccCCHHHHHHHHHHHhC
Confidence 225666554 68999999999997
No 263
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=91.29 E-value=0.34 Score=47.35 Aligned_cols=56 Identities=13% Similarity=0.115 Sum_probs=42.0
Q ss_pred cceeEecCCccccCCC--CC----CC-----------------CCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhh
Q 002955 592 NRAILLDYDGTIMVPG--SI----ST-----------------SPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFS 648 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~--~~----~~-----------------~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~ 648 (863)
++++++|+||||+... +. .. .+-+.+.+.|+.| + .+..++|+|+.+...++..+.
T Consensus 2 k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L-~-~~~~l~I~Ts~~~~~~~~il~ 79 (148)
T smart00577 2 KKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRA-S-ELFELVVFTAGLRMYADPVLD 79 (148)
T ss_pred CcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHH-H-hccEEEEEeCCcHHHHHHHHH
Confidence 5789999999999842 10 00 1246788889998 5 479999999999998888775
Q ss_pred c
Q 002955 649 S 649 (863)
Q Consensus 649 ~ 649 (863)
.
T Consensus 80 ~ 80 (148)
T smart00577 80 L 80 (148)
T ss_pred H
Confidence 4
No 264
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=91.18 E-value=0.03 Score=59.07 Aligned_cols=75 Identities=17% Similarity=0.263 Sum_probs=47.7
Q ss_pred cccceeEecCCccccCCCC-----------------------CCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHH
Q 002955 590 TKNRAILLDYDGTIMVPGS-----------------------ISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEW 646 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~~-----------------------~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~ 646 (863)
-+...|+||+|+|++...+ .....-+.+++.++.+ .+.|..|+++|||+......-
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~-~~~G~~V~~iT~R~~~~r~~T 148 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYA-RSRGVKVFFITGRPESQREAT 148 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHH-HHTTEEEEEEEEEETTCHHHH
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHH-HHCCCeEEEEecCCchhHHHH
Confidence 3467999999999985210 0112335577888887 888999999999997754443
Q ss_pred hhccCCceEEccCcEEEEe
Q 002955 647 FSSCEGLGIAAEHGYFVRP 665 (863)
Q Consensus 647 ~~~l~~l~liaenGa~I~~ 665 (863)
...+...|+....+.+++.
T Consensus 149 ~~nL~~~G~~~~~~l~lr~ 167 (229)
T PF03767_consen 149 EKNLKKAGFPGWDHLILRP 167 (229)
T ss_dssp HHHHHHHTTSTBSCGEEEE
T ss_pred HHHHHHcCCCccchhcccc
Confidence 3333334433334444443
No 265
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=90.94 E-value=0.38 Score=50.06 Aligned_cols=71 Identities=15% Similarity=0.104 Sum_probs=45.8
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCCccccceecCCHhHHHH
Q 002955 756 GVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILR 835 (863)
Q Consensus 756 gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~A~y~l~d~~eV~~ 835 (863)
|..|..+++.+. ..++.+++|||+.||+.|++.++..++...+.. .-.....+-+..++-.+|.+
T Consensus 142 g~~K~~~l~~~~-------~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~~l~~--------~~~~~~~~~~~~~~f~di~~ 206 (214)
T TIGR03333 142 GCCKPSLIRKLS-------EPNDYHIVIGDSVTDVEAAKQSDLCFARDYLLN--------ECEELGLNHAPFQDFYDVRK 206 (214)
T ss_pred CCCHHHHHHHHh-------hcCCcEEEEeCCHHHHHHHHhCCeeEehHHHHH--------HHHHcCCCccCcCCHHHHHH
Confidence 345888877653 346789999999999999999987433211000 00122233344688899998
Q ss_pred HHHHHH
Q 002955 836 MLLGLA 841 (863)
Q Consensus 836 ~L~~L~ 841 (863)
.|+++-
T Consensus 207 ~l~~~~ 212 (214)
T TIGR03333 207 ELENVK 212 (214)
T ss_pred HHHHHh
Confidence 887653
No 266
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=90.53 E-value=1.4 Score=55.94 Aligned_cols=42 Identities=21% Similarity=0.313 Sum_probs=31.7
Q ss_pred EecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhh
Q 002955 752 VKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 799 (863)
Q Consensus 752 I~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 799 (863)
++..-.-|+..++.+.+.. ...+++|||+.||..|.+.|..+
T Consensus 775 CR~sPlQKA~Vv~lVk~~~------~~~TLAIGDGANDVsMIQ~AhVG 816 (1151)
T KOG0206|consen 775 CRVSPLQKALVVKLVKKGL------KAVTLAIGDGANDVSMIQEAHVG 816 (1151)
T ss_pred ccCCHHHHHHHHHHHHhcC------CceEEEeeCCCccchheeeCCcC
Confidence 3333445999999884432 46799999999999999988653
No 267
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=90.52 E-value=2.9 Score=44.81 Aligned_cols=56 Identities=16% Similarity=0.211 Sum_probs=40.8
Q ss_pred cCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC
Q 002955 754 PQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK 819 (863)
Q Consensus 754 p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~ 819 (863)
-.|.+||.++..++.++ |..|+.|++|-|+...+.-.+.+=.. .+-..+++.....
T Consensus 158 t~~~~KG~~L~~fL~~~---~~~pk~IIfIDD~~~nl~sv~~a~k~-------~~I~f~G~~Yt~~ 213 (252)
T PF11019_consen 158 TGGQDKGEVLKYFLDKI---NQSPKKIIFIDDNKENLKSVEKACKK-------SGIDFIGFHYTGA 213 (252)
T ss_pred eCCCccHHHHHHHHHHc---CCCCCeEEEEeCCHHHHHHHHHHHhh-------CCCcEEEEEEcch
Confidence 35789999999999999 99999999999987665544433221 1234577777653
No 268
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=90.16 E-value=15 Score=41.39 Aligned_cols=138 Identities=15% Similarity=0.147 Sum_probs=83.0
Q ss_pred CeEEEeecCcccc-cCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccE
Q 002955 335 QIVMLGVDDMDIF-KGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPV 413 (863)
Q Consensus 335 ~~vil~Vdrld~~-KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv 413 (863)
+-+++..-|-.-. +++...+.|+.++++++|+.. +|.-..| | +-+++.. +.+++. -..|
T Consensus 205 ~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~----viyp~H~-~---~~v~e~~----------~~~L~~--~~~v 264 (383)
T COG0381 205 KYILVTAHRRENVGEPLEEICEALREIAEEYPDVI----VIYPVHP-R---PRVRELV----------LKRLKN--VERV 264 (383)
T ss_pred cEEEEEcchhhcccccHHHHHHHHHHHHHhCCCce----EEEeCCC-C---hhhhHHH----------HHHhCC--CCcE
Confidence 4566677776655 999999999999999998865 3322222 1 2222222 122222 1124
Q ss_pred EEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC-C-
Q 002955 414 VLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS-G- 491 (863)
Q Consensus 414 ~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~-~- 491 (863)
.+..++...+...|...|-+.+=-| |=.--||-.-+. -++++=+.+.=.+.+. |
T Consensus 265 -~li~pl~~~~f~~L~~~a~~iltDS-----GgiqEEAp~lg~------------------Pvl~lR~~TERPE~v~agt 320 (383)
T COG0381 265 -KLIDPLGYLDFHNLMKNAFLILTDS-----GGIQEEAPSLGK------------------PVLVLRDTTERPEGVEAGT 320 (383)
T ss_pred -EEeCCcchHHHHHHHHhceEEEecC-----CchhhhHHhcCC------------------cEEeeccCCCCccceecCc
Confidence 4445899999999999996554333 112234444321 2345544444444443 3
Q ss_pred ceEeCCCCHHHHHHHHHHHhCCCHHH
Q 002955 492 AIRVNPWNIDAVAEAMDSALGVSDAE 517 (863)
Q Consensus 492 al~VnP~d~~~~A~ai~~aL~m~~~e 517 (863)
.++|+ .|.+.+.+++.+++++++..
T Consensus 321 ~~lvg-~~~~~i~~~~~~ll~~~~~~ 345 (383)
T COG0381 321 NILVG-TDEENILDAATELLEDEEFY 345 (383)
T ss_pred eEEeC-ccHHHHHHHHHHHhhChHHH
Confidence 35665 57899999999999876443
No 269
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=89.85 E-value=13 Score=42.19 Aligned_cols=72 Identities=11% Similarity=0.057 Sum_probs=48.9
Q ss_pred EEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC-C-
Q 002955 413 VVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-S- 490 (863)
Q Consensus 413 v~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l-~- 490 (863)
-+.+.++++..++.++++.|+++|-.|- =++ .||.+.+.| +|. .|-.++. .
T Consensus 263 ~v~l~~~l~~~~~l~Ll~~a~~vitdSS---ggi--~EA~~lg~P-------------------vv~---l~~R~e~~~~ 315 (365)
T TIGR03568 263 NFRLFKSLGQERYLSLLKNADAVIGNSS---SGI--IEAPSFGVP-------------------TIN---IGTRQKGRLR 315 (365)
T ss_pred CEEEECCCChHHHHHHHHhCCEEEEcCh---hHH--HhhhhcCCC-------------------EEe---ecCCchhhhh
Confidence 3466779999999999999999884431 122 799998432 331 1223333 2
Q ss_pred C-c-eEeCCCCHHHHHHHHHHHhC
Q 002955 491 G-A-IRVNPWNIDAVAEAMDSALG 512 (863)
Q Consensus 491 ~-a-l~VnP~d~~~~A~ai~~aL~ 512 (863)
| . +.| +.|.+++.+++.++++
T Consensus 316 g~nvl~v-g~~~~~I~~a~~~~~~ 338 (365)
T TIGR03568 316 ADSVIDV-DPDKEEIVKAIEKLLD 338 (365)
T ss_pred cCeEEEe-CCCHHHHHHHHHHHhC
Confidence 3 2 447 7799999999999653
No 270
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=89.25 E-value=0.33 Score=49.77 Aligned_cols=34 Identities=24% Similarity=0.200 Sum_probs=26.5
Q ss_pred HHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc
Q 002955 615 AEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 615 ~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l 650 (863)
+.+.+.|+.| ++. +.++|+|+.....++.++..+
T Consensus 71 pg~~e~L~~L-~~~-~~~~IvS~~~~~~~~~~l~~~ 104 (205)
T PRK13582 71 PGAVEFLDWL-RER-FQVVILSDTFYEFAGPLMRQL 104 (205)
T ss_pred CCHHHHHHHH-Hhc-CCEEEEeCCcHHHHHHHHHHc
Confidence 3456778887 556 899999999999888887654
No 271
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=89.19 E-value=0.37 Score=53.57 Aligned_cols=49 Identities=24% Similarity=0.295 Sum_probs=37.5
Q ss_pred eeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCC----CCeEEEEc---CCChhhHHHHh
Q 002955 594 AILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDP----KNVVFLVS---GKDRDTLAEWF 647 (863)
Q Consensus 594 lI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~----g~~V~I~T---GR~~~~l~~~~ 647 (863)
.++||+||||.. ...+-+...++|+.| ... |..+.++| |++.....+.+
T Consensus 2 ~~ifD~DGvL~~----g~~~i~ga~eal~~L-~~~~~~~g~~~~flTNn~g~s~~~~~~~l 57 (321)
T TIGR01456 2 GFAFDIDGVLFR----GKKPIAGASDALRRL-NRNQGQLKIPYIFLTNGGGFSERARAEEI 57 (321)
T ss_pred EEEEeCcCceEC----CccccHHHHHHHHHH-hccccccCCCEEEEecCCCCCHHHHHHHH
Confidence 589999999997 455589999999998 666 88888876 55666644443
No 272
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=88.82 E-value=0.68 Score=48.51 Aligned_cols=33 Identities=12% Similarity=0.145 Sum_probs=28.4
Q ss_pred HHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhh
Q 002955 764 QHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 799 (863)
Q Consensus 764 ~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 799 (863)
..-+++| |.+|++|++|.|+.+.+..-+++|..
T Consensus 149 L~Aa~~L---gv~P~~CvviEDs~~Gi~Aa~aAGm~ 181 (221)
T COG0637 149 LLAAERL---GVDPEECVVVEDSPAGIQAAKAAGMR 181 (221)
T ss_pred HHHHHHc---CCChHHeEEEecchhHHHHHHHCCCE
Confidence 4445566 89999999999999999999999973
No 273
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=88.74 E-value=0.81 Score=56.13 Aligned_cols=86 Identities=19% Similarity=0.314 Sum_probs=51.5
Q ss_pred ceeEeecCcccccCCHHHHHHHHHhcccceeEecCC--ccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhh
Q 002955 565 GFRVVALDPNFRKLSIDHIVSAYKRTKNRAILLDYD--GTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDT 642 (863)
Q Consensus 565 ~~~~~~~~~~f~~l~~~~i~~~y~~s~~rlI~~DlD--GTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~ 642 (863)
+|||+|+-. +.|....+.++ ++.++-.+=+|++ |=++- ..+.-+++..+|++| ++.+++.+.|||-+..+
T Consensus 663 GfRVIAlA~--K~L~~~~~~~~-~~~~Rd~vEs~l~FlGLiVm----eNkLK~~T~~VI~eL-~~AnIRtVMcTGDNllT 734 (1140)
T KOG0208|consen 663 GFRVIALAS--KELETSTLQKA-QKLSRDTVESNLEFLGLIVM----ENKLKEETKRVIDEL-NRANIRTVMCTGDNLLT 734 (1140)
T ss_pred CeEEEEEec--CccCcchHHHH-hhccHhhhhccceeeEEEEe----ecccccccHHHHHHH-HhhcceEEEEcCCchhe
Confidence 689998864 44555433333 3444444444443 43443 334556666777777 66799999999999877
Q ss_pred HHHHhhccCCceEEccCcE
Q 002955 643 LAEWFSSCEGLGIAAEHGY 661 (863)
Q Consensus 643 l~~~~~~l~~l~liaenGa 661 (863)
.-...++ .|++.+.+.
T Consensus 735 aisVake---Cgmi~p~~~ 750 (1140)
T KOG0208|consen 735 AISVAKE---CGMIEPQVK 750 (1140)
T ss_pred eeehhhc---ccccCCCCe
Confidence 6655543 445544433
No 274
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=88.55 E-value=0.51 Score=48.51 Aligned_cols=36 Identities=14% Similarity=0.122 Sum_probs=27.8
Q ss_pred CCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhc
Q 002955 613 PNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSS 649 (863)
Q Consensus 613 ~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~ 649 (863)
+-+.+.+.|++| ++.|+.++|+||.+...+...+..
T Consensus 76 ~~~g~~~~L~~L-~~~g~~~~i~Sn~~~~~~~~~l~~ 111 (205)
T TIGR01454 76 VFPGVPELLAEL-RADGVGTAIATGKSGPRARSLLEA 111 (205)
T ss_pred cCCCHHHHHHHH-HHCCCeEEEEeCCchHHHHHHHHH
Confidence 445677788887 677899999999888887777654
No 275
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=88.15 E-value=1.1 Score=46.60 Aligned_cols=23 Identities=9% Similarity=0.174 Sum_probs=19.8
Q ss_pred cceEEEEeCCcchHHHHHHhhhh
Q 002955 777 PDFVLCIGDDRSDEDMFEVIKSA 799 (863)
Q Consensus 777 ~d~vlaiGD~~ND~~Mf~~ag~~ 799 (863)
.+...+-|||.||.+||+.+++.
T Consensus 175 ~~~~~aYsDS~~D~pmL~~a~~~ 197 (210)
T TIGR01545 175 LKLYSGYSDSKQDNPLLAFCEHR 197 (210)
T ss_pred hhheEEecCCcccHHHHHhCCCc
Confidence 34568999999999999999974
No 276
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=87.95 E-value=0.98 Score=46.93 Aligned_cols=36 Identities=6% Similarity=0.015 Sum_probs=28.5
Q ss_pred CHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc
Q 002955 614 NAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 614 s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l 650 (863)
.+.+.+.|+.+ ++.|+.++|+||.....++.++..+
T Consensus 72 ~pg~~e~l~~l-~~~g~~~~IvS~~~~~~i~~il~~~ 107 (214)
T TIGR03333 72 REGFREFVAFI-NEHGIPFYVISGGMDFFVYPLLEGI 107 (214)
T ss_pred cccHHHHHHHH-HHCCCeEEEECCCcHHHHHHHHHhh
Confidence 35555677777 7789999999999998888887654
No 277
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=87.73 E-value=0.88 Score=46.49 Aligned_cols=37 Identities=14% Similarity=0.008 Sum_probs=29.5
Q ss_pred CCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc
Q 002955 613 PNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 613 ~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l 650 (863)
+.+.+.+.|+.+ ++.|..++|+||.....++.+...+
T Consensus 88 ~~~~~~~~l~~l-~~~g~~v~ivS~s~~~~v~~~~~~l 124 (202)
T TIGR01490 88 LYPEARDLIRWH-KAEGHTIVLVSASLTILVKPLARIL 124 (202)
T ss_pred ccHHHHHHHHHH-HHCCCEEEEEeCCcHHHHHHHHHHc
Confidence 345667778887 7789999999999988888887654
No 278
>PRK09449 dUMP phosphatase; Provisional
Probab=87.51 E-value=1.2 Score=46.43 Aligned_cols=66 Identities=20% Similarity=0.095 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHhhcCCC-cceEEEEeCCc-chHHHHHHhhhhcCCCCCCCCcceEEEEeCC-C---ccccceecCCHhH
Q 002955 759 KGLVAQHQLETMHQKGML-PDFVLCIGDDR-SDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ-K---PSKAKYYLDDTAE 832 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~-~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~-~---~s~A~y~l~d~~e 832 (863)
+......+++++ |.. ++++++|||+. +|+..-+.+|.. ++.+..+. . ...|+|.+++..+
T Consensus 152 ~p~~~~~~~~~~---~~~~~~~~~~vgD~~~~Di~~A~~aG~~-----------~i~~~~~~~~~~~~~~~~~~i~~~~e 217 (224)
T PRK09449 152 DVAIFDYALEQM---GNPDRSRVLMVGDNLHSDILGGINAGID-----------TCWLNAHGREQPEGIAPTYQVSSLSE 217 (224)
T ss_pred CHHHHHHHHHHc---CCCCcccEEEEcCCcHHHHHHHHHCCCc-----------EEEECCCCCCCCCCCCCeEEECCHHH
Confidence 456788888888 875 58999999997 799999999973 12333221 1 1357888999999
Q ss_pred HHHHHH
Q 002955 833 ILRMLL 838 (863)
Q Consensus 833 V~~~L~ 838 (863)
+.++|.
T Consensus 218 l~~~l~ 223 (224)
T PRK09449 218 LEQLLC 223 (224)
T ss_pred HHHHHh
Confidence 988764
No 279
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=87.20 E-value=2.1 Score=49.68 Aligned_cols=101 Identities=19% Similarity=0.274 Sum_probs=59.1
Q ss_pred CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCccc
Q 002955 333 KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQP 412 (863)
Q Consensus 333 ~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~p 412 (863)
.+..++....++ .|=-+..+..+.++|++-|+-+ |++...|.. + ++.+.+.+.+ .|-. -.-
T Consensus 283 ~d~vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~----L~L~~~~~~--~------~~~l~~~~~~----~Gv~-~~R 343 (468)
T PF13844_consen 283 EDAVVFGSFNNL--FKISPETLDLWARILKAVPNSR----LWLLRFPAS--G------EARLRRRFAA----HGVD-PDR 343 (468)
T ss_dssp SSSEEEEE-S-G--GG--HHHHHHHHHHHHHSTTEE----EEEEETSTT--H------HHHHHHHHHH----TTS--GGG
T ss_pred CCceEEEecCcc--ccCCHHHHHHHHHHHHhCCCcE----EEEeeCCHH--H------HHHHHHHHHH----cCCC-hhh
Confidence 455566556655 5666888999999999999876 766654431 1 1222222222 2332 233
Q ss_pred EEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeee
Q 002955 413 VVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIIC 454 (863)
Q Consensus 413 v~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~ 454 (863)
+++ .+..+.+|..+.|+.+|||+-|..+-| +.+.+||+.+
T Consensus 344 i~f-~~~~~~~ehl~~~~~~DI~LDT~p~nG-~TTt~dALwm 383 (468)
T PF13844_consen 344 IIF-SPVAPREEHLRRYQLADICLDTFPYNG-GTTTLDALWM 383 (468)
T ss_dssp EEE-EE---HHHHHHHGGG-SEEE--SSS---SHHHHHHHHH
T ss_pred EEE-cCCCCHHHHHHHhhhCCEEeeCCCCCC-cHHHHHHHHc
Confidence 554 556788999999999999999987777 4577899998
No 280
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=86.65 E-value=0.74 Score=48.55 Aligned_cols=77 Identities=30% Similarity=0.363 Sum_probs=52.3
Q ss_pred cCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeC----------CCcccc
Q 002955 754 PQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVG----------QKPSKA 823 (863)
Q Consensus 754 p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG----------~~~s~A 823 (863)
|.+.-||..++.+++.....|...+.|++||||.||......++.. .++-..-| ...-+|
T Consensus 146 ~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~----------D~v~~R~~~~l~~~i~~~~~~~~a 215 (234)
T PF06888_consen 146 PPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPR----------DVVFPRKGYPLHKLIQKNPGEVKA 215 (234)
T ss_pred CCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCC----------CEEecCCCChHHHHHhcCCCccee
Confidence 5567899999999987555578899999999999999877665431 00101111 112344
Q ss_pred cee-cCCHhHHHHHHHHH
Q 002955 824 KYY-LDDTAEILRMLLGL 840 (863)
Q Consensus 824 ~y~-l~d~~eV~~~L~~L 840 (863)
+-. -.+-.++.+.|++|
T Consensus 216 ~v~~W~~g~~i~~~l~~~ 233 (234)
T PF06888_consen 216 EVVPWSSGEEILEILLQL 233 (234)
T ss_pred EEEecCCHHHHHHHHHhh
Confidence 443 36888888888876
No 281
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=86.05 E-value=1.9 Score=49.22 Aligned_cols=73 Identities=16% Similarity=0.212 Sum_probs=55.9
Q ss_pred HHHHHHHHHhcccceeEecCCccccCCC-------------CCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHH
Q 002955 580 IDHIVSAYKRTKNRAILLDYDGTIMVPG-------------SISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEW 646 (863)
Q Consensus 580 ~~~i~~~y~~s~~rlI~~DlDGTLl~~~-------------~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~ 646 (863)
+..++.+-.....|.+++|+|+||..-. +..+.+-.+..+.+..| .++|+.++|||=-.....++.
T Consensus 210 i~Sl~~A~~g~~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l-~kqGVlLav~SKN~~~da~ev 288 (574)
T COG3882 210 IASLLAAMSGKSKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGL-KKQGVLLAVCSKNTEKDAKEV 288 (574)
T ss_pred HHHHHHHhhCcccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHH-HhccEEEEEecCCchhhHHHH
Confidence 4556666666678999999999998621 11223446777888898 899999999999999999999
Q ss_pred hhccCCc
Q 002955 647 FSSCEGL 653 (863)
Q Consensus 647 ~~~l~~l 653 (863)
|...|..
T Consensus 289 F~khp~M 295 (574)
T COG3882 289 FRKHPDM 295 (574)
T ss_pred HhhCCCe
Confidence 9766543
No 282
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=85.97 E-value=0.67 Score=46.38 Aligned_cols=45 Identities=13% Similarity=0.221 Sum_probs=29.5
Q ss_pred cEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhh
Q 002955 748 NIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIK 797 (863)
Q Consensus 748 ~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag 797 (863)
.++||.|. +|-.=.+.|.+.. |+++++++.|=|...-.+--+..|
T Consensus 100 ~~~eI~~g--sK~~Hf~~i~~~t---gI~y~eMlFFDDe~~N~~~v~~lG 144 (169)
T PF12689_consen 100 DYLEIYPG--SKTTHFRRIHRKT---GIPYEEMLFFDDESRNIEVVSKLG 144 (169)
T ss_dssp CEEEESSS---HHHHHHHHHHHH------GGGEEEEES-HHHHHHHHTTT
T ss_pred chhheecC--chHHHHHHHHHhc---CCChhHEEEecCchhcceeeEecC
Confidence 35788775 8999999999988 999999999988654444433344
No 283
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=85.91 E-value=0.68 Score=47.53 Aligned_cols=73 Identities=18% Similarity=0.216 Sum_probs=50.1
Q ss_pred cEEEEecCCCCHHHHHHHHHHHHhhcCCC-cceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCC--Cccccc
Q 002955 748 NIVEVKPQGVNKGLVAQHQLETMHQKGML-PDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ--KPSKAK 824 (863)
Q Consensus 748 ~~vEI~p~gvsKG~al~~Ll~~l~~~gi~-~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~--~~s~A~ 824 (863)
.-+=.+| --.|.++.++.. |+. |++++.|-||.+-+.--+.+|.. +|-||. +-..++
T Consensus 155 ~~~vcKP----~~~afE~a~k~a---gi~~p~~t~FfDDS~~NI~~ak~vGl~-------------tvlv~~~~~~~~~d 214 (244)
T KOG3109|consen 155 KTVVCKP----SEEAFEKAMKVA---GIDSPRNTYFFDDSERNIQTAKEVGLK-------------TVLVGREHKIKGVD 214 (244)
T ss_pred CceeecC----CHHHHHHHHHHh---CCCCcCceEEEcCchhhHHHHHhccce-------------eEEEEeeecccchH
Confidence 4444555 345778887777 998 99999999999999999999873 566664 335566
Q ss_pred eecCCHhHHHHHHHHH
Q 002955 825 YYLDDTAEILRMLLGL 840 (863)
Q Consensus 825 y~l~d~~eV~~~L~~L 840 (863)
|.+.+.....+.+-.|
T Consensus 215 ~~l~~ih~~k~a~p~l 230 (244)
T KOG3109|consen 215 YALEQIHNNKEALPEL 230 (244)
T ss_pred HHHHHhhchhhhchHH
Confidence 6665444444444333
No 284
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=85.87 E-value=0.89 Score=45.89 Aligned_cols=46 Identities=22% Similarity=0.297 Sum_probs=35.5
Q ss_pred cceeEecCCccccCCCC-C-----CCCCCHHHHHHHHHhhcCCCCeEEEEcCC
Q 002955 592 NRAILLDYDGTIMVPGS-I-----STSPNAEAVAILDNLCRDPKNVVFLVSGK 638 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~~-~-----~~~~s~~~~~aL~~L~~d~g~~V~I~TGR 638 (863)
.++||+|-||||.-..+ . +-...+.++.+|.+| ++.|..++++|-.
T Consensus 5 ~k~lflDRDGtin~d~~~yv~~~~~~~~~~g~i~al~~l-~~~gy~lVvvTNQ 56 (181)
T COG0241 5 QKALFLDRDGTINIDKGDYVDSLDDFQFIPGVIPALLKL-QRAGYKLVVVTNQ 56 (181)
T ss_pred CcEEEEcCCCceecCCCcccCcHHHhccCccHHHHHHHH-HhCCCeEEEEECC
Confidence 58999999999986322 1 112457889999998 8889999999865
No 285
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=85.78 E-value=0.45 Score=46.84 Aligned_cols=56 Identities=18% Similarity=0.281 Sum_probs=37.7
Q ss_pred ceeEecCCccccCCCCCCC----------------CCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc
Q 002955 593 RAILLDYDGTIMVPGSIST----------------SPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 593 rlI~~DlDGTLl~~~~~~~----------------~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l 650 (863)
|++++|+||||+....... ..-|.+.+.|+.+++ ...++|.|..+.......+..+
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~--~~ev~i~T~~~~~ya~~v~~~l 72 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSK--HYEVVIWTSASEEYAEPVLDAL 72 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHH--HCEEEEE-SS-HHHHHHHHHHH
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHH--hceEEEEEeehhhhhhHHHHhh
Confidence 6899999999997431111 024667777887633 5899999999998888888766
No 286
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=85.56 E-value=68 Score=36.03 Aligned_cols=257 Identities=16% Similarity=0.087 Sum_probs=126.1
Q ss_pred HHHHHHHHHHHhhcCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHHHHHH--hCCEec
Q 002955 183 SVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALL--NADLIG 260 (863)
Q Consensus 183 ~vN~~fa~~i~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil~~ll--~~dlig 260 (863)
.+=..|++.+ +..+| |+|.||.=-...+..-|-...-++||+.. |---=+.|. +-|.-+|+.|-+. -||+--
T Consensus 54 ~~~~~~~~~~-~~~~P--d~Vlv~GD~~~~la~alaA~~~~ipv~Hi-eaGlRs~d~--~~g~~de~~R~~i~~la~lhf 127 (346)
T PF02350_consen 54 LAIIELADVL-EREKP--DAVLVLGDRNEALAAALAAFYLNIPVAHI-EAGLRSGDR--TEGMPDEINRHAIDKLAHLHF 127 (346)
T ss_dssp HHHHHHHHHH-HHHT---SEEEEETTSHHHHHHHHHHHHTT-EEEEE-S-----S-T--TSSTTHHHHHHHHHHH-SEEE
T ss_pred HHHHHHHHHH-HhcCC--CEEEEEcCCchHHHHHHHHHHhCCCEEEe-cCCCCcccc--CCCCchhhhhhhhhhhhhhhc
Confidence 3334444444 34477 89999988777777666665667775432 211101111 1244455554432 256665
Q ss_pred ccCHHHHHHHHHHHHhhhCceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEe
Q 002955 261 FHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLG 340 (863)
Q Consensus 261 F~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~ 340 (863)
--|..+.++.++ +|.+. ++ +.. +-.+++|.-........+... ...+.....++.+++.
T Consensus 128 ~~t~~~~~~L~~-----~G~~~--~r----I~~--------vG~~~~D~l~~~~~~~~~~~~--~~~i~~~~~~~~iLvt 186 (346)
T PF02350_consen 128 APTEEARERLLQ-----EGEPP--ER----IFV--------VGNPGIDALLQNKEEIEEKYK--NSGILQDAPKPYILVT 186 (346)
T ss_dssp ESSHHHHHHHHH-----TT--G--GG----EEE-----------HHHHHHHHHHHTTCC-HH--HHHHHHCTTSEEEEEE
T ss_pred cCCHHHHHHHHh-----cCCCC--Ce----EEE--------EChHHHHHHHHhHHHHhhhhh--hHHHHhccCCCEEEEE
Confidence 567877777765 34421 11 111 123466654332211111110 1122222344555555
Q ss_pred ecCcccc---cCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEc
Q 002955 341 VDDMDIF---KGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLID 417 (863)
Q Consensus 341 Vdrld~~---KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~ 417 (863)
.=|.... ......+.+++.+.+. +++. +|....++ ....+.+.+...++ ..+. +.
T Consensus 187 ~H~~t~~~~~~~~~~i~~~l~~L~~~-~~~~----vi~~~hn~-------p~~~~~i~~~l~~~---------~~v~-~~ 244 (346)
T PF02350_consen 187 LHPVTNEDNPERLEQILEALKALAER-QNVP----VIFPLHNN-------PRGSDIIIEKLKKY---------DNVR-LI 244 (346)
T ss_dssp -S-CCCCTHH--HHHHHHHHHHHHHH-TTEE----EEEE--S--------HHHHHHHHHHHTT----------TTEE-EE
T ss_pred eCcchhcCChHHHHHHHHHHHHHHhc-CCCc----EEEEecCC-------chHHHHHHHHhccc---------CCEE-EE
Confidence 5554433 3466777788888777 5544 55444222 12233332222221 1233 44
Q ss_pred CCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC---CCceE
Q 002955 418 TPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL---SGAIR 494 (863)
Q Consensus 418 ~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l---~~al~ 494 (863)
.+++..++.++++.|+++|=.|- | +..||..++. |+|.=...|-.++. ..+++
T Consensus 245 ~~l~~~~~l~ll~~a~~vvgdSs--G---I~eEa~~lg~-------------------P~v~iR~~geRqe~r~~~~nvl 300 (346)
T PF02350_consen 245 EPLGYEEYLSLLKNADLVVGDSS--G---IQEEAPSLGK-------------------PVVNIRDSGERQEGRERGSNVL 300 (346)
T ss_dssp ----HHHHHHHHHHESEEEESSH--H---HHHHGGGGT---------------------EEECSSS-S-HHHHHTTSEEE
T ss_pred CCCCHHHHHHHHhcceEEEEcCc--c---HHHHHHHhCC-------------------eEEEecCCCCCHHHHhhcceEE
Confidence 58999999999999999987762 2 2339888843 34444445555554 34566
Q ss_pred eCCCCHHHHHHHHHHHhCC
Q 002955 495 VNPWNIDAVAEAMDSALGV 513 (863)
Q Consensus 495 VnP~d~~~~A~ai~~aL~m 513 (863)
|. .|.+++.+||.+++..
T Consensus 301 v~-~~~~~I~~ai~~~l~~ 318 (346)
T PF02350_consen 301 VG-TDPEAIIQAIEKALSD 318 (346)
T ss_dssp ET-SSHHHHHHHHHHHHH-
T ss_pred eC-CCHHHHHHHHHHHHhC
Confidence 64 8999999999999964
No 287
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=84.05 E-value=2.8 Score=44.94 Aligned_cols=58 Identities=17% Similarity=0.231 Sum_probs=44.4
Q ss_pred ccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhc
Q 002955 591 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSS 649 (863)
Q Consensus 591 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~ 649 (863)
...+|+||+|.||+.......-+.+.+.+.|.+| ++.|..+++=|--+.+-+..-+..
T Consensus 121 ~phVIVfDlD~TLItd~~~v~Ir~~~v~~sL~~L-k~~g~vLvLWSyG~~eHV~~sl~~ 178 (297)
T PF05152_consen 121 PPHVIVFDLDSTLITDEGDVRIRDPAVYDSLREL-KEQGCVLVLWSYGNREHVRHSLKE 178 (297)
T ss_pred CCcEEEEECCCcccccCCccccCChHHHHHHHHH-HHcCCEEEEecCCCHHHHHHHHHH
Confidence 3569999999999984322334679999999999 888988888877777766666644
No 288
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=83.71 E-value=1.9 Score=42.86 Aligned_cols=57 Identities=9% Similarity=0.105 Sum_probs=34.5
Q ss_pred cceeEecCCccccCCCCCCCC---------------------CCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc
Q 002955 592 NRAILLDYDGTIMVPGSISTS---------------------PNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 592 ~rlI~~DlDGTLl~~~~~~~~---------------------~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l 650 (863)
++.+++|+|+||+........ .-|.+.+.|.+| .+. ..++|.|.-+...+..++..+
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l-~~~-yei~I~Ts~~~~yA~~il~~l 78 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERV-SKW-YELVIFTASLEEYADPVLDIL 78 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHH-Hhc-CEEEEEcCCcHHHHHHHHHHH
Confidence 368999999999974211100 124556666666 332 667777766666666655433
No 289
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=83.69 E-value=12 Score=42.59 Aligned_cols=97 Identities=14% Similarity=0.071 Sum_probs=57.5
Q ss_pred EEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcc----cC-
Q 002955 415 LIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSP----SL- 489 (863)
Q Consensus 415 ~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~----~l- 489 (863)
.+.+.+++. .++..||++|. +-|.| +..|+++++. |+|+.-..+-.+ .+
T Consensus 278 ~~~~~~p~~---~ll~~~~~~I~---hgG~~-t~~Eal~~G~-------------------P~v~~p~~~dq~~~a~~l~ 331 (392)
T TIGR01426 278 EVRQWVPQL---EILKKADAFIT---HGGMN-STMEALFNGV-------------------PMVAVPQGADQPMTARRIA 331 (392)
T ss_pred EEeCCCCHH---HHHhhCCEEEE---CCCch-HHHHHHHhCC-------------------CEEecCCcccHHHHHHHHH
Confidence 455677765 56788998885 45766 6689999944 344433332111 12
Q ss_pred --CCceEeCC--CCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhcc-CCHHHHHH
Q 002955 490 --SGAIRVNP--WNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVST-HDVAYWAR 539 (863)
Q Consensus 490 --~~al~VnP--~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~ 539 (863)
..|+.++. .+.++++++|.++|..+ +.+.+.+++.+.+.. ......++
T Consensus 332 ~~g~g~~l~~~~~~~~~l~~ai~~~l~~~--~~~~~~~~l~~~~~~~~~~~~aa~ 384 (392)
T TIGR01426 332 ELGLGRHLPPEEVTAEKLREAVLAVLSDP--RYAERLRKMRAEIREAGGARRAAD 384 (392)
T ss_pred HCCCEEEeccccCCHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHcCCHHHHHH
Confidence 22555553 46799999999999754 344444555544443 33444443
No 290
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=83.62 E-value=1.4 Score=42.16 Aligned_cols=68 Identities=19% Similarity=0.162 Sum_probs=40.0
Q ss_pred CCEEEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCCChHHHH-----HHHHhCCEecccCHHHHHHHHH
Q 002955 200 DDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELL-----RALLNADLIGFHTFDYARHFLS 272 (863)
Q Consensus 200 ~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~r~eil-----~~ll~~dligF~t~~~~~~Fl~ 272 (863)
-|+|++|+++..++..+++++. ++|+.+.+|..+.... .++...++ ..+-.||.|-..+...++.+.+
T Consensus 74 ~Dvv~~~~~~~~~~~~~~~~~~-~~p~v~~~h~~~~~~~----~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~l~~ 146 (160)
T PF13579_consen 74 PDVVHAHSPTAGLVAALARRRR-GIPLVVTVHGTLFRRG----SRWKRRLYRWLERRLLRRADRVIVVSEAMRRYLRR 146 (160)
T ss_dssp -SEEEEEHHHHHHHHHHHHHHH-T--EEEE-SS-T----------HHHHHHHHHHHHHHHH-SEEEESSHHHHHHHHH
T ss_pred CeEEEecccchhHHHHHHHHcc-CCcEEEEECCCchhhc----cchhhHHHHHHHHHHHhcCCEEEECCHHHHHHHHH
Confidence 3999999998888887777443 7999999997543221 12222222 4455688888888877776654
No 291
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=82.98 E-value=2.4 Score=43.87 Aligned_cols=66 Identities=20% Similarity=0.155 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCc-chHHHHHHhhhhcCCCCCCCCcceEEEEeCCCc----cccceecCCHhHH
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDR-SDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKP----SKAKYYLDDTAEI 833 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~----s~A~y~l~d~~eV 833 (863)
+....+.+++++. |++++++++|||+. +|+.+-+.+|.. .+.+..|..+ ..+.|.+++..++
T Consensus 154 ~~~~~~~~~~~~~--~~~~~~~v~igD~~~~di~~A~~~G~~-----------~i~~~~~~~~~~~~~~~~~~~~~~~el 220 (224)
T TIGR02254 154 DKEIFNYALERMP--KFSKEEVLMIGDSLTADIKGGQNAGLD-----------TCWMNPDMHPNPDDIIPTYEIRSLEEL 220 (224)
T ss_pred CHHHHHHHHHHhc--CCCchheEEECCCcHHHHHHHHHCCCc-----------EEEECCCCCCCCCCCCCceEECCHHHH
Confidence 4556667666541 78899999999997 899999999973 2445554322 3567888888887
Q ss_pred HHHH
Q 002955 834 LRML 837 (863)
Q Consensus 834 ~~~L 837 (863)
..+|
T Consensus 221 ~~~~ 224 (224)
T TIGR02254 221 YEIL 224 (224)
T ss_pred HhhC
Confidence 7653
No 292
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=82.90 E-value=2 Score=44.12 Aligned_cols=58 Identities=12% Similarity=0.079 Sum_probs=41.4
Q ss_pred cccceeEecCCccccCCCCCCCC----CCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhc
Q 002955 590 TKNRAILLDYDGTIMVPGSISTS----PNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSS 649 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~~~~~~----~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~ 649 (863)
..+|++++|||+||++..+.... .-|.+.+.|+.+.+ ...|+|-|..+...+...+..
T Consensus 19 ~~kklLVLDLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~~~--~feIvVwTAa~~~ya~~~l~~ 80 (195)
T TIGR02245 19 EGKKLLVLDIDYTLFDHRSPAETGEELMRPYLHEFLTSAYE--DYDIVIWSATSMKWIEIKMTE 80 (195)
T ss_pred CCCcEEEEeCCCceEcccccCCCceEEeCCCHHHHHHHHHh--CCEEEEEecCCHHHHHHHHHH
Confidence 45689999999999974221211 23677788888643 788888888888777776653
No 293
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=82.05 E-value=1.5 Score=45.34 Aligned_cols=36 Identities=22% Similarity=0.192 Sum_probs=28.2
Q ss_pred CCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc
Q 002955 613 PNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 613 ~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l 650 (863)
+.+.+.+.|+.+ ++.+ .++|+||-....+..++..+
T Consensus 69 l~pga~ell~~l-k~~~-~~~IVS~~~~~~~~~il~~l 104 (203)
T TIGR02137 69 PLEGAVEFVDWL-RERF-QVVILSDTFYEFSQPLMRQL 104 (203)
T ss_pred CCccHHHHHHHH-HhCC-eEEEEeCChHHHHHHHHHHc
Confidence 456777788887 5544 99999999999888888654
No 294
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=81.53 E-value=0.67 Score=47.34 Aligned_cols=34 Identities=12% Similarity=-0.025 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHH
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEV 795 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ 795 (863)
+...+..+++++ |++++++++|||+.+|+.+-+.
T Consensus 163 ~p~~~~~~~~~~---~~~~~~~i~vGD~~~Di~aA~~ 196 (197)
T TIGR01548 163 NPEPLILAAKAL---GVEACHAAMVGDTVDDIITGRK 196 (197)
T ss_pred CHHHHHHHHHHh---CcCcccEEEEeCCHHHHHHHHh
Confidence 567788888888 9999999999999999987654
No 295
>PLN02811 hydrolase
Probab=81.48 E-value=2.1 Score=44.52 Aligned_cols=60 Identities=13% Similarity=0.008 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHhhcC---CCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC----ccccceecCCHh
Q 002955 759 KGLVAQHQLETMHQKG---MLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLDDTA 831 (863)
Q Consensus 759 KG~al~~Ll~~l~~~g---i~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~d~~ 831 (863)
+.......++++ | ++++++++|||+..|+.+-+.+|.. +++|..|.. ...|++++++..
T Consensus 139 ~p~~~~~a~~~~---~~~~~~~~~~v~IgDs~~di~aA~~aG~~-----------~i~v~~~~~~~~~~~~~d~vi~~~~ 204 (220)
T PLN02811 139 APDIFLAAARRF---EDGPVDPGKVLVFEDAPSGVEAAKNAGMS-----------VVMVPDPRLDKSYCKGADQVLSSLL 204 (220)
T ss_pred CcHHHHHHHHHh---CCCCCCccceEEEeccHhhHHHHHHCCCe-----------EEEEeCCCCcHhhhhchhhHhcCHh
Confidence 455677777777 5 8899999999999999999999973 356655531 124556666655
Q ss_pred H
Q 002955 832 E 832 (863)
Q Consensus 832 e 832 (863)
+
T Consensus 205 e 205 (220)
T PLN02811 205 D 205 (220)
T ss_pred h
Confidence 4
No 296
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=80.94 E-value=2.3 Score=42.54 Aligned_cols=42 Identities=21% Similarity=0.178 Sum_probs=34.0
Q ss_pred ecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcC
Q 002955 753 KPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAA 801 (863)
Q Consensus 753 ~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~ 801 (863)
.+-|..|+..+..+.+. ++.++++|||..|++..+.....+|
T Consensus 142 s~fG~dK~~vI~~l~e~-------~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 142 SQFGHDKSSVIHELSEP-------NESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred cccCCCcchhHHHhhcC-------CceEEEecCCcccccHhhhhhhHhh
Confidence 45688999999988764 4669999999999998888877543
No 297
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=80.90 E-value=0.82 Score=48.37 Aligned_cols=37 Identities=16% Similarity=0.046 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCC-cchHHHHHHhhh
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDD-RSDEDMFEVIKS 798 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~-~ND~~Mf~~ag~ 798 (863)
+......+++++ |++++++++|||+ ..|+..-+.+|.
T Consensus 165 ~p~~~~~a~~~~---~~~~~~~~~VGD~~~~Di~~A~~aG~ 202 (238)
T PRK10748 165 FSDMYHLAAEKL---NVPIGEILHVGDDLTTDVAGAIRCGM 202 (238)
T ss_pred cHHHHHHHHHHc---CCChhHEEEEcCCcHHHHHHHHHCCC
Confidence 466778888888 9999999999999 599999999987
No 298
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=80.29 E-value=11 Score=46.21 Aligned_cols=53 Identities=13% Similarity=0.268 Sum_probs=42.8
Q ss_pred cccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc
Q 002955 590 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l 650 (863)
....|.|+-+=|-+= .|-+++.++++.+ .+.|++|..+||-.....+.+.+++
T Consensus 569 ~E~~LtFvGlVGi~D-------PPR~ev~~ai~~c-~~aGIrV~mITGD~~~TA~AI~r~i 621 (972)
T KOG0202|consen 569 AESDLTFVGLVGILD-------PPRPEVADAIELC-RQAGIRVIMITGDNKETAEAIAREI 621 (972)
T ss_pred cccceEEEEEeeccC-------CCchhHHHHHHHH-HHcCCEEEEEcCCCHHHHHHHHHHh
Confidence 345788887666543 4778999999995 9999999999999999999988643
No 299
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=79.96 E-value=3.2 Score=41.23 Aligned_cols=69 Identities=16% Similarity=0.247 Sum_probs=50.3
Q ss_pred cCCHHHHHHHHHhcccceeEecCCccccCCCC------------------------------CCCCCCHHHHHHHHHhhc
Q 002955 577 KLSIDHIVSAYKRTKNRAILLDYDGTIMVPGS------------------------------ISTSPNAEAVAILDNLCR 626 (863)
Q Consensus 577 ~l~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~------------------------------~~~~~s~~~~~aL~~L~~ 626 (863)
-.++..|......-+.-.+-||+|.|++-.++ ..-.++.++...|-.+.+
T Consensus 48 wiSvaqI~~SLeG~~Pi~VsFDIDDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq 127 (237)
T COG3700 48 WISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQ 127 (237)
T ss_pred EEEHHHHHhhhcCCCCeeEeeccCCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHH
Confidence 35678888887777777888999999995321 112366677666666668
Q ss_pred CCCCeEEEEcCCChhhHHH
Q 002955 627 DPKNVVFLVSGKDRDTLAE 645 (863)
Q Consensus 627 d~g~~V~I~TGR~~~~l~~ 645 (863)
..|-.++++|||+....+.
T Consensus 128 ~RGD~i~FvTGRt~gk~d~ 146 (237)
T COG3700 128 RRGDAIYFVTGRTPGKTDT 146 (237)
T ss_pred hcCCeEEEEecCCCCcccc
Confidence 8899999999999764443
No 300
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=79.91 E-value=3.2 Score=43.81 Aligned_cols=15 Identities=27% Similarity=0.386 Sum_probs=13.7
Q ss_pred ccceeEecCCccccC
Q 002955 591 KNRAILLDYDGTIMV 605 (863)
Q Consensus 591 ~~rlI~~DlDGTLl~ 605 (863)
++|+|+||+||||++
T Consensus 9 ~~k~iiFDlDGTL~D 23 (238)
T PRK10748 9 RISALTFDLDDTLYD 23 (238)
T ss_pred CceeEEEcCcccccC
Confidence 468999999999999
No 301
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=79.72 E-value=3.1 Score=50.95 Aligned_cols=68 Identities=19% Similarity=0.257 Sum_probs=50.3
Q ss_pred cEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC----cccc
Q 002955 748 NIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKA 823 (863)
Q Consensus 748 ~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A 823 (863)
.+=|+.|. +|...++.+.++ | ..|+++||+.||-+.|..+.. ++++|.. ...|
T Consensus 579 v~AellPe--dK~~~V~~l~~~----g---~~VamVGDGINDAPALA~AdV--------------GiAmG~GtDvA~eaA 635 (713)
T COG2217 579 VRAELLPE--DKAEIVRELQAE----G---RKVAMVGDGINDAPALAAADV--------------GIAMGSGTDVAIEAA 635 (713)
T ss_pred heccCCcH--HHHHHHHHHHhc----C---CEEEEEeCCchhHHHHhhcCe--------------eEeecCCcHHHHHhC
Confidence 34566665 588888888754 3 579999999999999999975 5666652 4677
Q ss_pred ceec--CCHhHHHHHHH
Q 002955 824 KYYL--DDTAEILRMLL 838 (863)
Q Consensus 824 ~y~l--~d~~eV~~~L~ 838 (863)
+..+ +|...|.++++
T Consensus 636 DvvL~~~dL~~v~~ai~ 652 (713)
T COG2217 636 DVVLMRDDLSAVPEAID 652 (713)
T ss_pred CEEEecCCHHHHHHHHH
Confidence 8776 56777776654
No 302
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=79.36 E-value=1.7 Score=46.96 Aligned_cols=38 Identities=18% Similarity=0.206 Sum_probs=30.7
Q ss_pred CCCHHHHHH-HHHHHHhhcC--CCcceEEEEeCCcchHHHHHHh
Q 002955 756 GVNKGLVAQ-HQLETMHQKG--MLPDFVLCIGDDRSDEDMFEVI 796 (863)
Q Consensus 756 gvsKG~al~-~Ll~~l~~~g--i~~d~vlaiGD~~ND~~Mf~~a 796 (863)
..+|...+. ...+.+ + .++++|+++||+.||+.|...+
T Consensus 190 ~~~K~~~v~~~~~~~~---~~~~~~~~vI~vGDs~~Dl~ma~g~ 230 (277)
T TIGR01544 190 TFNKNHDVALRNTEYF---NQLKDRSNIILLGDSQGDLRMADGV 230 (277)
T ss_pred ccccHHHHHHHHHHHh---CccCCcceEEEECcChhhhhHhcCC
Confidence 357877666 567777 6 7889999999999999997766
No 303
>PRK09449 dUMP phosphatase; Provisional
Probab=79.27 E-value=0.94 Score=47.16 Aligned_cols=16 Identities=38% Similarity=0.389 Sum_probs=14.4
Q ss_pred cccceeEecCCccccC
Q 002955 590 TKNRAILLDYDGTIMV 605 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~ 605 (863)
|++|.|+||+||||++
T Consensus 1 m~~k~iiFDlDGTLid 16 (224)
T PRK09449 1 MKYDWILFDADETLFH 16 (224)
T ss_pred CCccEEEEcCCCchhc
Confidence 4579999999999997
No 304
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=79.12 E-value=1.4 Score=44.83 Aligned_cols=28 Identities=25% Similarity=0.483 Sum_probs=21.0
Q ss_pred CCHHHHHHHHHhhcCCCCeEEEEcCCChh
Q 002955 613 PNAEAVAILDNLCRDPKNVVFLVSGKDRD 641 (863)
Q Consensus 613 ~s~~~~~aL~~L~~d~g~~V~I~TGR~~~ 641 (863)
|-+.+.++|++| .+.|..++++|+|+..
T Consensus 74 p~~gA~e~l~~L-~~~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 74 PIPGAVEALKKL-RDKGHEIVIITARPPE 101 (191)
T ss_dssp B-TTHHHHHHHH-HTSTTEEEEEEE-SSS
T ss_pred ccHHHHHHHHHH-HHcCCcEEEEEecCcc
Confidence 456788999999 6778888888888754
No 305
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=78.94 E-value=1.5 Score=46.80 Aligned_cols=14 Identities=29% Similarity=0.563 Sum_probs=13.2
Q ss_pred cceeEecCCccccC
Q 002955 592 NRAILLDYDGTIMV 605 (863)
Q Consensus 592 ~rlI~~DlDGTLl~ 605 (863)
+|+|+||+||||++
T Consensus 2 ~k~viFD~DGTLiD 15 (253)
T TIGR01422 2 IEAVIFDWAGTTVD 15 (253)
T ss_pred ceEEEEeCCCCeec
Confidence 68999999999999
No 306
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=78.84 E-value=11 Score=40.80 Aligned_cols=93 Identities=8% Similarity=0.013 Sum_probs=56.6
Q ss_pred CCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccE
Q 002955 334 GQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPV 413 (863)
Q Consensus 334 ~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv 413 (863)
.+++++..|-.|+.+.....++|+.++ .++++ +..|..+.. +.+++++ +.++. + + .+
T Consensus 170 ~~~iLi~~GG~d~~~~~~~~l~~l~~~---~~~~~----i~vv~G~~~---~~~~~l~----~~~~~-~---~-----~i 226 (279)
T TIGR03590 170 LRRVLVSFGGADPDNLTLKLLSALAES---QINIS----ITLVTGSSN---PNLDELK----KFAKE-Y---P-----NI 226 (279)
T ss_pred cCeEEEEeCCcCCcCHHHHHHHHHhcc---ccCce----EEEEECCCC---cCHHHHH----HHHHh-C---C-----CE
Confidence 367999999999988666777777653 23332 333333321 2233333 33222 1 1 13
Q ss_pred EEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecC
Q 002955 414 VLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQG 457 (863)
Q Consensus 414 ~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~ 457 (863)
. +.+ ..+++..++..||++|.+ -|.+.+|+++|+.|
T Consensus 227 ~-~~~--~~~~m~~lm~~aDl~Is~-----~G~T~~E~~a~g~P 262 (279)
T TIGR03590 227 I-LFI--DVENMAELMNEADLAIGA-----AGSTSWERCCLGLP 262 (279)
T ss_pred E-EEe--CHHHHHHHHHHCCEEEEC-----CchHHHHHHHcCCC
Confidence 3 222 356899999999999874 45899999999543
No 307
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=78.47 E-value=2.3 Score=44.20 Aligned_cols=15 Identities=40% Similarity=0.685 Sum_probs=13.4
Q ss_pred ccceeEecCCccccC
Q 002955 591 KNRAILLDYDGTIMV 605 (863)
Q Consensus 591 ~~rlI~~DlDGTLl~ 605 (863)
..|+.+||+||||++
T Consensus 4 ~~~la~FDfDgTLt~ 18 (210)
T TIGR01545 4 AKRIIFFDLDGTLHQ 18 (210)
T ss_pred cCcEEEEcCCCCCcc
Confidence 468999999999998
No 308
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=78.45 E-value=1.2 Score=46.06 Aligned_cols=14 Identities=36% Similarity=0.634 Sum_probs=13.0
Q ss_pred cceeEecCCccccC
Q 002955 592 NRAILLDYDGTIMV 605 (863)
Q Consensus 592 ~rlI~~DlDGTLl~ 605 (863)
+|+|+||+||||++
T Consensus 1 ~k~viFD~DGTL~d 14 (224)
T TIGR02254 1 YKTLLFDLDDTILD 14 (224)
T ss_pred CCEEEEcCcCcccc
Confidence 47999999999998
No 309
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=78.31 E-value=12 Score=36.18 Aligned_cols=73 Identities=22% Similarity=0.236 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHh
Q 002955 352 LKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVI 431 (863)
Q Consensus 352 ~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ 431 (863)
.-+.+...+++++ ++..|.||.|-..++..+. ..+.+++.++++..+|+ .||++.+...+..+-...+..
T Consensus 40 ~~~~~l~~li~~~-----~~~~vVVGlP~~m~g~~~~-~~~~~~~f~~~L~~r~~----lpv~l~DERltTv~A~~~L~~ 109 (141)
T COG0816 40 QDFNALLKLVKEY-----QVDTVVVGLPLNMDGTEGP-RAELARKFAERLKKRFN----LPVVLWDERLSTVEAERMLIE 109 (141)
T ss_pred hhHHHHHHHHHHh-----CCCEEEEecCcCCCCCcch-hHHHHHHHHHHHHHhcC----CCEEEEcCccCHHHHHHHHHH
Confidence 3445556666665 3668899999877777766 67788999999999997 589999999888877777666
Q ss_pred ccc
Q 002955 432 AEC 434 (863)
Q Consensus 432 ADv 434 (863)
+++
T Consensus 110 ~~~ 112 (141)
T COG0816 110 AGV 112 (141)
T ss_pred cCC
Confidence 543
No 310
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=78.23 E-value=3.3 Score=40.93 Aligned_cols=59 Identities=12% Similarity=0.018 Sum_probs=43.6
Q ss_pred cccceeEecCCccccCCCCCC------C--------------------------CCCHHHHHHHHHhhcCCCCeEEEEcC
Q 002955 590 TKNRAILLDYDGTIMVPGSIS------T--------------------------SPNAEAVAILDNLCRDPKNVVFLVSG 637 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~~~~------~--------------------------~~s~~~~~aL~~L~~d~g~~V~I~TG 637 (863)
.++..+++|||.||++..... . .+-|.+.+.|+++ + ++..++|+|.
T Consensus 4 ~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l-~-~~yel~I~T~ 81 (156)
T TIGR02250 4 EKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEA-S-KLYEMHVYTM 81 (156)
T ss_pred CCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHH-H-hhcEEEEEeC
Confidence 456789999999999743110 0 0135778899998 4 4589999999
Q ss_pred CChhhHHHHhhcc
Q 002955 638 KDRDTLAEWFSSC 650 (863)
Q Consensus 638 R~~~~l~~~~~~l 650 (863)
.+.......+..+
T Consensus 82 ~~~~yA~~vl~~l 94 (156)
T TIGR02250 82 GTRAYAQAIAKLI 94 (156)
T ss_pred CcHHHHHHHHHHh
Confidence 9999888888665
No 311
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=77.32 E-value=3.4 Score=40.33 Aligned_cols=37 Identities=24% Similarity=0.353 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhh
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 798 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 798 (863)
+..+.+.+++.+ |+++++++.|||+..|+.+.+.+|.
T Consensus 135 ~~~~~~~~~~~~---~~~p~~~~~vgD~~~d~~~A~~~G~ 171 (176)
T PF13419_consen 135 DPDAYRRALEKL---GIPPEEILFVGDSPSDVEAAKEAGI 171 (176)
T ss_dssp SHHHHHHHHHHH---TSSGGGEEEEESSHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHc---CCCcceEEEEeCCHHHHHHHHHcCC
Confidence 468899999999 9999999999999999999999987
No 312
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=77.05 E-value=2.7 Score=43.29 Aligned_cols=38 Identities=21% Similarity=0.309 Sum_probs=29.0
Q ss_pred CHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhh
Q 002955 758 NKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 799 (863)
Q Consensus 758 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 799 (863)
-|+..++.+++.- +++.. ++|+|||.+|.+||+.+...
T Consensus 191 ~ka~i~e~~~ele---~~d~s-a~~VGDSItDv~ml~~~rgr 228 (315)
T COG4030 191 EKAKIMEGYCELE---GIDFS-AVVVGDSITDVKMLEAARGR 228 (315)
T ss_pred chhHHHHHHHhhc---CCCcc-eeEecCcccchHHHHHhhcc
Confidence 3666677777654 55444 89999999999999999753
No 313
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=76.62 E-value=1.4e+02 Score=33.77 Aligned_cols=148 Identities=15% Similarity=0.139 Sum_probs=81.9
Q ss_pred CCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccE
Q 002955 334 GQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPV 413 (863)
Q Consensus 334 ~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv 413 (863)
+++.||-+|-=--.+.+...+.+....|.+ ++.+++++.+. . +++++....++ +...|
T Consensus 182 ~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~------~~~v~~~~G~~----~-~~~~~~~~~~~-----------~~~~v 239 (357)
T COG0707 182 DKKTILVTGGSQGAKALNDLVPEALAKLAN------RIQVIHQTGKN----D-LEELKSAYNEL-----------GVVRV 239 (357)
T ss_pred CCcEEEEECCcchhHHHHHHHHHHHHHhhh------CeEEEEEcCcc----h-HHHHHHHHhhc-----------CcEEE
Confidence 677777766544444455554444333332 45577776332 2 33333332211 11112
Q ss_pred EEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccC--ccc---
Q 002955 414 VLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGC--SPS--- 488 (863)
Q Consensus 414 ~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~--~~~--- 488 (863)
..| .+++.++|++||++|.=| | ++++-|..+++.| .|+=-+... ..+
T Consensus 240 ~~f-----~~dm~~~~~~ADLvIsRa---G-a~Ti~E~~a~g~P-------------------~IliP~p~~~~~~Q~~N 291 (357)
T COG0707 240 LPF-----IDDMAALLAAADLVISRA---G-ALTIAELLALGVP-------------------AILVPYPPGADGHQEYN 291 (357)
T ss_pred eeH-----HhhHHHHHHhccEEEeCC---c-ccHHHHHHHhCCC-------------------EEEeCCCCCccchHHHH
Confidence 222 346999999999988543 2 5788899998543 333333332 112
Q ss_pred ---C---CCceEeCCCC--HHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCC
Q 002955 489 ---L---SGAIRVNPWN--IDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHD 533 (863)
Q Consensus 489 ---l---~~al~VnP~d--~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~ 533 (863)
+ ..|+.+.-++ .+.+++.|.++++. .|+..+|....+.+..-+
T Consensus 292 A~~l~~~gaa~~i~~~~lt~~~l~~~i~~l~~~--~~~l~~m~~~a~~~~~p~ 342 (357)
T COG0707 292 AKFLEKAGAALVIRQSELTPEKLAELILRLLSN--PEKLKAMAENAKKLGKPD 342 (357)
T ss_pred HHHHHhCCCEEEeccccCCHHHHHHHHHHHhcC--HHHHHHHHHHHHhcCCCC
Confidence 2 2366666555 88999999999975 455555655555554433
No 314
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=75.55 E-value=6.5 Score=40.72 Aligned_cols=64 Identities=20% Similarity=0.281 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHhhcCCCcceEEEEeCC-cchHHHHHHhhhhcCCCCCCCCcceEEEEeCCCc-------cccceecCCHh
Q 002955 760 GLVAQHQLETMHQKGMLPDFVLCIGDD-RSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKP-------SKAKYYLDDTA 831 (863)
Q Consensus 760 G~al~~Ll~~l~~~gi~~d~vlaiGD~-~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~-------s~A~y~l~d~~ 831 (863)
...-+.+++++ |++|++++.|||+ .||+.-.+.+|.. +|-+.... ..+.+.+.+..
T Consensus 157 ~~~f~~~~~~~---g~~p~~~l~VgD~~~~di~gA~~~G~~-------------~vwi~~~~~~~~~~~~~~~~~i~~l~ 220 (229)
T COG1011 157 PEIFEYALEKL---GVPPEEALFVGDSLENDILGARALGMK-------------TVWINRGGKPLPDALEAPDYEISSLA 220 (229)
T ss_pred cHHHHHHHHHc---CCCcceEEEECCChhhhhHHHHhcCcE-------------EEEECCCCCCCCCCccCCceEEcCHH
Confidence 45667788888 9999999999997 7777889999873 44443221 35666778888
Q ss_pred HHHHHHHH
Q 002955 832 EILRMLLG 839 (863)
Q Consensus 832 eV~~~L~~ 839 (863)
++...+..
T Consensus 221 ~l~~~~~~ 228 (229)
T COG1011 221 ELLDLLER 228 (229)
T ss_pred HHHHHHhh
Confidence 88777754
No 315
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=75.49 E-value=2 Score=43.17 Aligned_cols=37 Identities=11% Similarity=0.157 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhh
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 798 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 798 (863)
+....+++++++ |.+++++++|||+..|+..-+.+|.
T Consensus 143 ~p~~~~~~~~~~---~~~~~~~l~vgD~~~di~aA~~~G~ 179 (184)
T TIGR01993 143 SPQAYEKALREA---GVDPERAIFFDDSARNIAAAKALGM 179 (184)
T ss_pred CHHHHHHHHHHh---CCCccceEEEeCCHHHHHHHHHcCC
Confidence 567888999998 9999999999999999999999886
No 316
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=75.27 E-value=23 Score=39.37 Aligned_cols=137 Identities=16% Similarity=0.180 Sum_probs=83.1
Q ss_pred eEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEE
Q 002955 336 IVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVL 415 (863)
Q Consensus 336 ~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~ 415 (863)
.|+|| -.-|++-+....|+++.+.+. .+. .++. |- +.+...+++.+++.+.+.++ ||.. .+..
T Consensus 187 tILvG-NSgd~sNnHieaL~~L~~~~~--~~~----kIiv---PL-sYg~~n~~Yi~~V~~~~~~l---F~~~---~~~i 249 (360)
T PF07429_consen 187 TILVG-NSGDPSNNHIEALEALKQQFG--DDV----KIIV---PL-SYGANNQAYIQQVIQAGKEL---FGAE---NFQI 249 (360)
T ss_pred EEEEc-CCCCCCccHHHHHHHHHHhcC--CCe----EEEE---EC-CCCCchHHHHHHHHHHHHHh---cCcc---ceeE
Confidence 44444 446777777776666654321 222 2222 21 23333456777766665555 5432 3556
Q ss_pred EcCCCCHHHHHHHHHhccceeeccc-ccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC-CCce
Q 002955 416 IDTPLQFYERIAYYVIAECCLVTAV-RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-SGAI 493 (863)
Q Consensus 416 ~~~~v~~~el~aly~~ADv~vvtS~-~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l-~~al 493 (863)
+...+|.+|..++++.+|+.++... ..|||-..+ .+.+ |.++++|+-.-....+ ..++
T Consensus 250 L~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~l-Ll~~-------------------G~~v~L~~~np~~~~l~~~~i 309 (360)
T PF07429_consen 250 LTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICL-LLQL-------------------GKKVFLSRDNPFWQDLKEQGI 309 (360)
T ss_pred hhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHH-HHHc-------------------CCeEEEecCChHHHHHHhCCC
Confidence 7889999999999999999999987 488886642 1222 5678888887777666 3354
Q ss_pred Ee----CCCCHHHHHHHHHH
Q 002955 494 RV----NPWNIDAVAEAMDS 509 (863)
Q Consensus 494 ~V----nP~d~~~~A~ai~~ 509 (863)
.| +.-|...+++|=++
T Consensus 310 pVlf~~d~L~~~~v~ea~rq 329 (360)
T PF07429_consen 310 PVLFYGDELDEALVREAQRQ 329 (360)
T ss_pred eEEeccccCCHHHHHHHHHH
Confidence 33 33344444444333
No 317
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=72.71 E-value=3.5 Score=42.02 Aligned_cols=28 Identities=25% Similarity=0.464 Sum_probs=19.0
Q ss_pred eeEecCCccccCCCCCCCCCCHHHHHHHHHh
Q 002955 594 AILLDYDGTIMVPGSISTSPNAEAVAILDNL 624 (863)
Q Consensus 594 lI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L 624 (863)
+|+||+||||++ +.........++++++
T Consensus 2 ~viFD~DGTLiD---s~~~~~~a~~~~~~~~ 29 (197)
T TIGR01548 2 ALVLDMDGVMAD---VSQSYRRAIIDTVEHF 29 (197)
T ss_pred ceEEecCceEEe---chHHHHHHHHHHHHHH
Confidence 689999999999 3433444555555554
No 318
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=71.65 E-value=24 Score=43.43 Aligned_cols=39 Identities=15% Similarity=0.258 Sum_probs=34.0
Q ss_pred CCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc
Q 002955 611 TSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 611 ~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l 650 (863)
....|.+.++++. |+..|++|-.+||-.....+.+..+|
T Consensus 646 DPvRPgV~~AV~~-Cq~AGItVRMVTGDNI~TAkAIA~eC 684 (1034)
T KOG0204|consen 646 DPVRPGVPEAVQL-CQRAGITVRMVTGDNINTAKAIAREC 684 (1034)
T ss_pred CCCCCCcHHHHHH-HHHcCcEEEEEeCCcHHHHHHHHHHc
Confidence 3456899999998 89999999999999999999998654
No 319
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=71.62 E-value=3 Score=42.48 Aligned_cols=38 Identities=26% Similarity=0.218 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhh
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 799 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 799 (863)
+....+.+++++ |++++++++|||+.+|+...+.+|..
T Consensus 150 ~~~~~~~~~~~~---~~~p~~~~~vgD~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 150 APQVYQLALEAL---GVPPDEVLFVASNPWDLGGAKKFGFK 187 (198)
T ss_pred CHHHHHHHHHHh---CCChhhEEEEeCCHHHHHHHHHCCCc
Confidence 467788899998 99999999999999999999999873
No 320
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=71.10 E-value=5.3 Score=47.23 Aligned_cols=76 Identities=13% Similarity=0.263 Sum_probs=50.6
Q ss_pred ccceeEecCCccccCCCC-------CCCC-CCHHHHHHHHHhhcCCCCeEEEEcCCChhh---HHHHhhccCCceEEccC
Q 002955 591 KNRAILLDYDGTIMVPGS-------ISTS-PNAEAVAILDNLCRDPKNVVFLVSGKDRDT---LAEWFSSCEGLGIAAEH 659 (863)
Q Consensus 591 ~~rlI~~DlDGTLl~~~~-------~~~~-~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~---l~~~~~~l~~l~liaen 659 (863)
.-|+|++|+|||++...- ..+. -...+.+...++ .+.|++++.+|.|.... -+.++..+..-|.+--.
T Consensus 529 n~kIVISDIDGTITKSDvLGh~lp~iGkDWTh~GVAkLyt~I-k~NGYk~lyLSARaIgQA~~TR~yL~nv~QdG~~LPd 607 (738)
T KOG2116|consen 529 NDKIVISDIDGTITKSDVLGHVLPMIGKDWTHTGVAKLYTKI-KENGYKILYLSARAIGQADSTRQYLKNVEQDGKKLPD 607 (738)
T ss_pred CCcEEEecCCCceEhhhhhhhhhhhhcCcchhhhHHHHHHHH-HhCCeeEEEEehhhhhhhHHHHHHHHHHhhcCccCCC
Confidence 458999999999986210 1111 134566667776 78899999999999753 45566555455555556
Q ss_pred cEEEEeCC
Q 002955 660 GYFVRPNY 667 (863)
Q Consensus 660 Ga~I~~~~ 667 (863)
|-+|..+.
T Consensus 608 GPViLSPd 615 (738)
T KOG2116|consen 608 GPVILSPD 615 (738)
T ss_pred CCEEeCCC
Confidence 66665554
No 321
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=70.92 E-value=5.7 Score=41.99 Aligned_cols=36 Identities=8% Similarity=0.110 Sum_probs=21.6
Q ss_pred CHHHHHHHHHhhc-CCCCeEEEEcCCChhhHHHHhhc
Q 002955 614 NAEAVAILDNLCR-DPKNVVFLVSGKDRDTLAEWFSS 649 (863)
Q Consensus 614 s~~~~~aL~~L~~-d~g~~V~I~TGR~~~~l~~~~~~ 649 (863)
.+...++++.+++ ..|..++|+|.-.-..++.++..
T Consensus 73 ~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~ 109 (234)
T PF06888_consen 73 DPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEH 109 (234)
T ss_pred CccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHh
Confidence 3445555555532 34677777777766666666654
No 322
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=69.52 E-value=6 Score=39.29 Aligned_cols=36 Identities=14% Similarity=0.190 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhh
Q 002955 760 GLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 798 (863)
Q Consensus 760 G~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 798 (863)
....+.+++++ |++++++++|||+..|+.+-+.+|.
T Consensus 143 ~~~~~~~~~~~---~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 143 PDIYLLALKKL---GLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred HHHHHHHHHHc---CCCcceEEEEcCCHHHHHHHHHcCC
Confidence 67788888888 9999999999999999999999986
No 323
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=68.22 E-value=4.8 Score=40.94 Aligned_cols=14 Identities=29% Similarity=0.484 Sum_probs=12.7
Q ss_pred cceeEecCCccccC
Q 002955 592 NRAILLDYDGTIMV 605 (863)
Q Consensus 592 ~rlI~~DlDGTLl~ 605 (863)
+|+|+||+||||++
T Consensus 1 ik~viFD~dgTLiD 14 (198)
T TIGR01428 1 IKALVFDVYGTLFD 14 (198)
T ss_pred CcEEEEeCCCcCcc
Confidence 47899999999998
No 324
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=68.15 E-value=21 Score=39.47 Aligned_cols=109 Identities=12% Similarity=0.107 Sum_probs=58.5
Q ss_pred HHHHHHHh---CCCeEEEeecC--cccccCHH---HHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHH
Q 002955 325 VAELQDQF---KGQIVMLGVDD--MDIFKGIS---LKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHA 396 (863)
Q Consensus 325 ~~~l~~~~---~~~~vil~Vdr--ld~~KGi~---~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~ 396 (863)
..++..++ ....+.+-||- =.+.=+-. .++..+..+.+.++ .. +. |. +||-..++ ..+.+.+
T Consensus 134 ~~~~~~~~~~l~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~-~~----~~-vt-tSRRTp~~---~~~~L~~ 203 (311)
T PF06258_consen 134 AAAWAPRLAALPRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYG-GS----LL-VT-TSRRTPPE---AEAALRE 203 (311)
T ss_pred HHhhhhhhccCCCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCC-Ce----EE-EE-cCCCCcHH---HHHHHHH
Confidence 33444444 34555555553 22222223 56677777877776 33 33 33 34433333 2333332
Q ss_pred HHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeec
Q 002955 397 TVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQ 456 (863)
Q Consensus 397 l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~ 456 (863)
..+. ..-+.++. .-+..=+.+++..||.++||. |..+++ .||++++.
T Consensus 204 ~~~~---------~~~~~~~~-~~~~nPy~~~La~ad~i~VT~--DSvSMv-sEA~~tG~ 250 (311)
T PF06258_consen 204 LLKD---------NPGVYIWD-GTGENPYLGFLAAADAIVVTE--DSVSMV-SEAAATGK 250 (311)
T ss_pred hhcC---------CCceEEec-CCCCCcHHHHHHhCCEEEEcC--ccHHHH-HHHHHcCC
Confidence 2211 11132343 333445889999999999997 777766 59999844
No 325
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=67.51 E-value=8.1 Score=38.91 Aligned_cols=41 Identities=15% Similarity=0.096 Sum_probs=31.1
Q ss_pred CHHHHHHHHHHHHhhc---CCCcceEEEEeCCcchHHHHHHhhh
Q 002955 758 NKGLVAQHQLETMHQK---GMLPDFVLCIGDDRSDEDMFEVIKS 798 (863)
Q Consensus 758 sKG~al~~Ll~~l~~~---gi~~d~vlaiGD~~ND~~Mf~~ag~ 798 (863)
+|..-...+++.+... |++++++++|||+..|+..-+.+|.
T Consensus 108 ~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi 151 (174)
T TIGR01685 108 NKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGV 151 (174)
T ss_pred chHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCC
Confidence 4555555556655332 4899999999999999999888876
No 326
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=66.38 E-value=3.2 Score=46.68 Aligned_cols=50 Identities=10% Similarity=0.198 Sum_probs=30.4
Q ss_pred cccceeEecCCccccCCCCCCCC-----------CCHHHHHHHHHhhcCCCCeEEEEcCCChhhH
Q 002955 590 TKNRAILLDYDGTIMVPGSISTS-----------PNAEAVAILDNLCRDPKNVVFLVSGKDRDTL 643 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~~~~~~~~-----------~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l 643 (863)
...+++++|+|||++. ++.. -+..+.+...+. ...|..|...|.|+.-.+
T Consensus 373 ~n~kiVVsDiDGTITk---SD~~Ghv~~miGkdwth~gVAkLYtdI-~rNGYkI~YltsR~~Gqa 433 (580)
T COG5083 373 NNKKIVVSDIDGTITK---SDALGHVKQMIGKDWTHNGVAKLYTDI-DRNGYKIKYLTSRSYGQA 433 (580)
T ss_pred CCCcEEEEecCCcEEe---hhhHHHHHHHhccchhhcchhhhhhhh-ccCceEEEEEecccccch
Confidence 4579999999999997 2211 122333444444 445667777777765543
No 327
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=65.38 E-value=2.3 Score=42.26 Aligned_cols=33 Identities=24% Similarity=0.245 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHH
Q 002955 760 GLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEV 795 (863)
Q Consensus 760 G~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ 795 (863)
....+.+++++ |++++++++|||+..|+..-+.
T Consensus 142 p~~f~~~~~~~---~~~p~~~l~vgD~~~Di~~A~~ 174 (175)
T TIGR01493 142 PVVYELVFDTV---GLPPDRVLMVAAHQWDLIGARK 174 (175)
T ss_pred HHHHHHHHHHH---CCCHHHeEeEecChhhHHHHhc
Confidence 55668888888 9999999999999999887653
No 328
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=65.31 E-value=34 Score=42.11 Aligned_cols=40 Identities=23% Similarity=0.326 Sum_probs=29.8
Q ss_pred CHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceEEc
Q 002955 614 NAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAA 657 (863)
Q Consensus 614 s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~lia 657 (863)
...+=++..+ |+..|++|+.+||+.....+.+.. ..|++.
T Consensus 592 R~~vP~Av~~-CrsAGIkvimVTgdhpiTAkAiA~---~vgIi~ 631 (1019)
T KOG0203|consen 592 RAAVPDAVGK-CRSAGIKVIMVTGDHPITAKAIAK---SVGIIS 631 (1019)
T ss_pred cccCchhhhh-hhhhCceEEEEecCccchhhhhhh---heeeec
Confidence 3344455556 789999999999999999988874 455544
No 329
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=65.17 E-value=6.7 Score=40.05 Aligned_cols=37 Identities=14% Similarity=0.206 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhh
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 798 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 798 (863)
+....+.+++++ |++++++++|||+..|+..-+.+|.
T Consensus 143 ~p~~~~~~~~~~---~~~p~~~l~vgD~~~di~aA~~aG~ 179 (199)
T PRK09456 143 EARIYQHVLQAE---GFSAADAVFFDDNADNIEAANALGI 179 (199)
T ss_pred CHHHHHHHHHHc---CCChhHeEEeCCCHHHHHHHHHcCC
Confidence 577788889998 9999999999999999999998886
No 330
>PF04312 DUF460: Protein of unknown function (DUF460); InterPro: IPR007408 This is an archaeal protein of unknown function.
Probab=64.76 E-value=8.2 Score=36.94 Aligned_cols=56 Identities=16% Similarity=0.233 Sum_probs=40.0
Q ss_pred ccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCC--hhhHHHHhhcc
Q 002955 591 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKD--RDTLAEWFSSC 650 (863)
Q Consensus 591 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~--~~~l~~~~~~l 650 (863)
..-+-++||||.|+.-.+....-..++++.+.+. |..|+|+|--. ...++++...+
T Consensus 42 ttgiAildL~G~~l~l~S~R~~~~~evi~~I~~~----G~PviVAtDV~p~P~~V~Kia~~f 99 (138)
T PF04312_consen 42 TTGIAILDLDGELLDLKSSRNMSRSEVIEWISEY----GKPVIVATDVSPPPETVKKIARSF 99 (138)
T ss_pred eeEEEEEecCCcEEEEEeecCCCHHHHHHHHHHc----CCEEEEEecCCCCcHHHHHHHHHh
Confidence 3467889999999975434444456777777776 99999999655 45777776543
No 331
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=62.99 E-value=9.4 Score=39.98 Aligned_cols=38 Identities=13% Similarity=0.052 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhh
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 799 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 799 (863)
+......+++++ |++++++++|||+..|+..-+.+|..
T Consensus 154 ~p~~y~~i~~~l---gv~p~e~lfVgDs~~Di~AA~~AG~~ 191 (220)
T TIGR01691 154 EAQSYVKIAGQL---GSPPREILFLSDIINELDAARKAGLH 191 (220)
T ss_pred CHHHHHHHHHHh---CcChhHEEEEeCCHHHHHHHHHcCCE
Confidence 577888999999 99999999999999999999999973
No 332
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=62.86 E-value=7.5 Score=39.00 Aligned_cols=35 Identities=17% Similarity=0.325 Sum_probs=22.0
Q ss_pred HHHHHHHHHhhcCCC--cceEEEEeCCc-------chHHHHHHhhhh
Q 002955 762 VAQHQLETMHQKGML--PDFVLCIGDDR-------SDEDMFEVIKSA 799 (863)
Q Consensus 762 al~~Ll~~l~~~gi~--~d~vlaiGD~~-------ND~~Mf~~ag~~ 799 (863)
.+..+++++ |+. .+.+++.+|.. -|-++|+.+-..
T Consensus 110 ~~~~~l~~~---gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~ 153 (184)
T TIGR01993 110 HARRALNRL---GIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALRE 153 (184)
T ss_pred HHHHHHHHc---CcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHH
Confidence 456667776 764 36677776643 377788766543
No 333
>COG4996 Predicted phosphatase [General function prediction only]
Probab=62.41 E-value=12 Score=35.48 Aligned_cols=54 Identities=22% Similarity=0.150 Sum_probs=32.2
Q ss_pred ceeEecCCccccCCCCC--CCC-------------------CCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHh
Q 002955 593 RAILLDYDGTIMVPGSI--STS-------------------PNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWF 647 (863)
Q Consensus 593 rlI~~DlDGTLl~~~~~--~~~-------------------~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~ 647 (863)
++|+||.||||.++... -+. .-+.+.+.|+.+ +..|..+..+|=.-....-+.+
T Consensus 1 ~~i~~d~d~t~wdhh~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~wa-rnsG~i~~~~sWN~~~kA~~aL 75 (164)
T COG4996 1 RAIVFDADKTLWDHHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWA-RNSGYILGLASWNFEDKAIKAL 75 (164)
T ss_pred CcEEEeCCCcccccccchhcCCcceecCccceecCCCeEEEEcHHHHHHHHHH-HhCCcEEEEeecCchHHHHHHH
Confidence 58999999999985310 011 124556666664 6666666666655554444444
No 334
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=60.50 E-value=7.1 Score=42.44 Aligned_cols=39 Identities=23% Similarity=0.325 Sum_probs=31.4
Q ss_pred ceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCC----CCeEEEEc
Q 002955 593 RAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDP----KNVVFLVS 636 (863)
Q Consensus 593 rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~----g~~V~I~T 636 (863)
--|+||+||.|+- .+.+-+...++|+.| .+. ++.+++.|
T Consensus 36 fgfafDIDGVL~R----G~~~i~~~~~Alr~L-~~~~g~lkIP~vfLT 78 (389)
T KOG1618|consen 36 FGFAFDIDGVLFR----GHRPIPGALKALRRL-VDNQGQLKIPFVFLT 78 (389)
T ss_pred eeEEEecccEEEe----cCCCCcchHHHHHHH-HhcCCCeeccEEEEe
Confidence 4799999999996 566778999999999 554 56677776
No 335
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=59.47 E-value=4.5 Score=41.93 Aligned_cols=16 Identities=44% Similarity=0.656 Sum_probs=14.6
Q ss_pred cccceeEecCCccccC
Q 002955 590 TKNRAILLDYDGTIMV 605 (863)
Q Consensus 590 s~~rlI~~DlDGTLl~ 605 (863)
+++|.|+||+||||++
T Consensus 2 ~~~k~i~FD~d~TL~d 17 (229)
T COG1011 2 MMIKAILFDLDGTLLD 17 (229)
T ss_pred CceeEEEEecCCcccc
Confidence 4689999999999998
No 336
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=59.08 E-value=13 Score=35.28 Aligned_cols=34 Identities=12% Similarity=0.194 Sum_probs=29.9
Q ss_pred CHHHHHHHHHHHHhhcC--CCcceEEEEeCCcchHHHHH
Q 002955 758 NKGLVAQHQLETMHQKG--MLPDFVLCIGDDRSDEDMFE 794 (863)
Q Consensus 758 sKG~al~~Ll~~l~~~g--i~~d~vlaiGD~~ND~~Mf~ 794 (863)
.|+.....+++++ | +.++++++|||+..|++-++
T Consensus 90 pkp~~~~~a~~~l---g~~~~p~~~l~igDs~~n~~~~~ 125 (128)
T TIGR01681 90 PKSPRLVEIALKL---NGVLKPKSILFVDDRPDNNEEVD 125 (128)
T ss_pred cHHHHHHHHHHHh---cCCCCcceEEEECCCHhHHHHHH
Confidence 4899999999999 9 99999999999999965444
No 337
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=56.86 E-value=7.7 Score=43.34 Aligned_cols=46 Identities=24% Similarity=0.359 Sum_probs=34.5
Q ss_pred ccceeEecCCccccCCCC--------CCC-CCCHHHHHHHHHhhcCCCCeEEEEcC
Q 002955 591 KNRAILLDYDGTIMVPGS--------IST-SPNAEAVAILDNLCRDPKNVVFLVSG 637 (863)
Q Consensus 591 ~~rlI~~DlDGTLl~~~~--------~~~-~~s~~~~~aL~~L~~d~g~~V~I~TG 637 (863)
..|.+.|||||||++..+ .+. .+.++.-.-|+.| ..+|+.++|.|-
T Consensus 74 ~~K~i~FD~dgtlI~t~sg~vf~~~~~dw~~l~~~vp~Klktl-~~~g~~l~iftn 128 (422)
T KOG2134|consen 74 GSKIIMFDYDGTLIDTKSGKVFPKGSMDWRILFPEVPSKLKTL-YQDGIKLFIFTN 128 (422)
T ss_pred CcceEEEecCCceeecCCcceeeccCccceeeccccchhhhhh-ccCCeEEEEEec
Confidence 468999999999998442 111 2346677788888 778999999984
No 338
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=56.69 E-value=9.4 Score=36.25 Aligned_cols=48 Identities=17% Similarity=0.144 Sum_probs=40.9
Q ss_pred eEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhh
Q 002955 595 ILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFS 648 (863)
Q Consensus 595 I~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~ 648 (863)
.+-++++|+.. .+..-+++.+.|++| .+- +.|+|+||-...++.+...
T Consensus 17 ~~~~v~~tiat----gGklf~ev~e~iqeL-~d~-V~i~IASgDr~gsl~~lae 64 (152)
T COG4087 17 KAGKVLYTIAT----GGKLFSEVSETIQEL-HDM-VDIYIASGDRKGSLVQLAE 64 (152)
T ss_pred ecceEEEEEcc----CcEEcHhhHHHHHHH-HHh-heEEEecCCcchHHHHHHH
Confidence 35678899986 677788999999999 666 9999999999999998884
No 339
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=54.06 E-value=20 Score=44.38 Aligned_cols=68 Identities=19% Similarity=0.219 Sum_probs=48.0
Q ss_pred cEEEEecCCCCHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCCC----cccc
Q 002955 748 NIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKA 823 (863)
Q Consensus 748 ~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A 823 (863)
-+-|++|. .|..-++.|.+. + .-|.++||+.||-+.|..+.. ++++|.. ...|
T Consensus 765 V~aev~P~--~K~~~Ik~lq~~----~---~~VaMVGDGINDaPALA~AdV--------------GIaig~gs~vAieaA 821 (951)
T KOG0207|consen 765 VYAEVLPE--QKAEKIKEIQKN----G---GPVAMVGDGINDAPALAQADV--------------GIAIGAGSDVAIEAA 821 (951)
T ss_pred EEeccCch--hhHHHHHHHHhc----C---CcEEEEeCCCCccHHHHhhcc--------------ceeeccccHHHHhhC
Confidence 35667775 488888877664 2 459999999999999999975 4555542 4667
Q ss_pred ceec--CCHhHHHHHHH
Q 002955 824 KYYL--DDTAEILRMLL 838 (863)
Q Consensus 824 ~y~l--~d~~eV~~~L~ 838 (863)
+.++ +|..+|...++
T Consensus 822 DIVLmrn~L~~v~~ai~ 838 (951)
T KOG0207|consen 822 DIVLMRNDLRDVPFAID 838 (951)
T ss_pred CEEEEccchhhhHHHHH
Confidence 7775 56666665554
No 340
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=53.65 E-value=12 Score=37.16 Aligned_cols=24 Identities=25% Similarity=0.326 Sum_probs=16.9
Q ss_pred eeEecCCccccCCCCCCCCCCHHHHHHHHHh
Q 002955 594 AILLDYDGTIMVPGSISTSPNAEAVAILDNL 624 (863)
Q Consensus 594 lI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L 624 (863)
+|+||+||||++. . +...++++.+
T Consensus 1 ~viFD~DGTL~D~---~----~~~~~~~~~~ 24 (175)
T TIGR01493 1 AMVFDVYGTLVDV---H----GGVRACLAAI 24 (175)
T ss_pred CeEEecCCcCccc---H----HHHHHHHHHh
Confidence 4799999999982 2 3455556665
No 341
>PRK14986 glycogen phosphorylase; Provisional
Probab=52.78 E-value=2.8e+02 Score=34.85 Aligned_cols=136 Identities=11% Similarity=0.088 Sum_probs=85.0
Q ss_pred CCeEEEeecCcccccCHHH-HHHHHHHH--HHhCCCCC-CceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCC
Q 002955 334 GQIVMLGVDDMDIFKGISL-KLLAMEQL--LSQNPSKR-GKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPG 409 (863)
Q Consensus 334 ~~~vil~Vdrld~~KGi~~-~l~A~~~l--l~~~p~~~-~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~ 409 (863)
+-..++.+-|+..-|--.+ .|..++++ +..+|+.. ..+++|..|-..-++. .-.++-+.|.++++-||..=...+
T Consensus 542 ~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~-~aK~iIk~I~~va~~in~Dp~v~~ 620 (815)
T PRK14986 542 KALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYY-MAKHIIHLINDVAKVINNDPQIGD 620 (815)
T ss_pred ccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcH-HHHHHHHHHHHHHHHhccChhhcC
Confidence 3457888999998888777 77776666 34566532 3466766664442222 224566777888888886433344
Q ss_pred cccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC
Q 002955 410 YQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL 489 (863)
Q Consensus 410 ~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l 489 (863)
.-.|+|+. ...-.--..++.+|||-.-+|. .++|| |+.+ +|..++ .|+|-+|..-|...++
T Consensus 621 ~lkVVFle-nY~vslAe~lipg~Dv~eqis~------ag~EA--SGTs--nMK~al--------NGaLtlgtlDG~nvEi 681 (815)
T PRK14986 621 KLKVVFIP-NYSVSLAQLIIPAADLSEQISL------AGTEA--SGTS--NMKFAL--------NGALTIGTLDGANVEM 681 (815)
T ss_pred ceeEEEeC-CCCHHHHHHhhhhhhhhhhCCC------CCccc--cCcc--hhhHHh--------cCceeeeccCCchhHH
Confidence 45688776 3455555678999999888775 45563 3222 122222 3678888877766555
No 342
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=52.55 E-value=1.1e+02 Score=30.87 Aligned_cols=50 Identities=20% Similarity=0.205 Sum_probs=36.0
Q ss_pred hHHHHHHHHHHHHHHHHhh----cCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEE
Q 002955 177 LWQAYVSVNKIFADKVMEV----ISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFL 230 (863)
Q Consensus 177 ~w~~Y~~vN~~fa~~i~~~----~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~fl 230 (863)
.|+.=..-=+..|+++.+. +.| |+|.-| +-+.=+-+||+.+|++++.-++
T Consensus 42 ~~e~~~~rg~av~~a~~~L~~~Gf~P--DvI~~H--~GWGe~Lflkdv~P~a~li~Y~ 95 (171)
T PF12000_consen 42 DFEAAVLRGQAVARAARQLRAQGFVP--DVIIAH--PGWGETLFLKDVFPDAPLIGYF 95 (171)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcCCCC--CEEEEc--CCcchhhhHHHhCCCCcEEEEE
Confidence 3444444445555555544 345 999999 9999999999999999988543
No 343
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=51.86 E-value=3.1e+02 Score=33.84 Aligned_cols=136 Identities=13% Similarity=0.130 Sum_probs=72.7
Q ss_pred CCeEEEeecCcccccCHHHH-HHHHHHH--HHhCCCCCC-ceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCC
Q 002955 334 GQIVMLGVDDMDIFKGISLK-LLAMEQL--LSQNPSKRG-KIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPG 409 (863)
Q Consensus 334 ~~~vil~Vdrld~~KGi~~~-l~A~~~l--l~~~p~~~~-~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~ 409 (863)
+...++.+-|+..-|=-.+. |.-+.++ +++.|+..- .+++|..|-..-++ ..-.++-+.+.++++.||..-...+
T Consensus 443 ~slfdv~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP~d-~~gK~iIk~I~~va~~in~Dp~v~~ 521 (713)
T PF00343_consen 443 DSLFDVQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHPGD-YMGKEIIKLINNVAEVINNDPEVGD 521 (713)
T ss_dssp TSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----TT--HHHHHHHHHHHHHHHHHCT-TTTCC
T ss_pred chhhhhhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCCCc-HHHHHHHHHHHHHHHHHhcChhhcc
Confidence 45678899999999976663 3333332 345665432 45666555322112 1223566677777888886543334
Q ss_pred cccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC
Q 002955 410 YQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL 489 (863)
Q Consensus 410 ~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l 489 (863)
.-.|+|+. ..+-.--..++.++||-.-+|. .++|| |+. .++..+. .|+|.+|..-|+.-++
T Consensus 522 ~lkVvFle-nYdvslA~~lipg~DVwln~p~------~p~EA--SGT--SgMK~~~--------NGaL~lstlDG~niEi 582 (713)
T PF00343_consen 522 RLKVVFLE-NYDVSLAEKLIPGVDVWLNIPT------RPKEA--SGT--SGMKAAM--------NGALNLSTLDGWNIEI 582 (713)
T ss_dssp GEEEEEET-T-SHHHHHHHGGG-SEEEE---------TTSSS--S-S--HHHHHHH--------TT-EEEEESSTCHHHH
T ss_pred ceeEEeec-CCcHHHHHHHhhhhhhhhhCCC------CCccc--cCC--Ccchhhc--------CCCeEEecccchhHHH
Confidence 44677776 4566666688999999999986 34553 211 1122222 3678888887765554
No 344
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=51.21 E-value=5.5 Score=40.62 Aligned_cols=34 Identities=15% Similarity=0.239 Sum_probs=30.2
Q ss_pred HHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhh
Q 002955 761 LVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIK 797 (863)
Q Consensus 761 ~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag 797 (863)
..+..+++.+ +.++..|+++||+.||..|++.||
T Consensus 182 k~~~~~i~~l---~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 182 KIFLRIIKEL---QVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp HHHHHHHHHH---TCTGGGEEEEESSGGHHHHHHHSS
T ss_pred hhHHHHHHHH---hcCCCEEEEEccCHHHHHHHHhCc
Confidence 3668888888 888999999999999999999875
No 345
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=50.97 E-value=13 Score=38.98 Aligned_cols=53 Identities=23% Similarity=0.452 Sum_probs=39.7
Q ss_pred hcccceeEecCCccccCCCCC-----------------------CCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhh
Q 002955 589 RTKNRAILLDYDGTIMVPGSI-----------------------STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDT 642 (863)
Q Consensus 589 ~s~~rlI~~DlDGTLl~~~~~-----------------------~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~ 642 (863)
+-+.+.|++|+|-|+++..+. ..++-+...+.|+-. ...|..|+.+|-|..+.
T Consensus 76 k~K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe~Wd~wV~a~~sk~vpGA~eFl~Yv-n~~Gg~ifyiSNR~~~~ 151 (274)
T COG2503 76 KGKKKAVVLDLDETVLDNSAYQGYQVLNNKGFTPETWDKWVQAKKSKAVPGAVEFLNYV-NSNGGKIFYISNRDQEN 151 (274)
T ss_pred cCCCceEEEecchHhhcCccccchhhhcCCCCCccchHHHHhhcccccCccHHHHHHHH-HhcCcEEEEEeccchhc
Confidence 345679999999999984321 112446677888885 88899999999999876
No 346
>PRK04128 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=50.20 E-value=37 Score=35.73 Aligned_cols=62 Identities=13% Similarity=0.275 Sum_probs=42.7
Q ss_pred CHHHHHHHHHhcccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcC-CChhhHHHHhh
Q 002955 579 SIDHIVSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSG-KDRDTLAEWFS 648 (863)
Q Consensus 579 ~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TG-R~~~~l~~~~~ 648 (863)
+..++++.|...-..+++.|+|||+.. .+.+.+.++++++..+.+|.+.-| |+.+++++++.
T Consensus 31 dp~~~a~~~~~~~~~l~ivDldga~~g--------~~~n~~~i~~i~~~~~~pv~~gGGIrs~edv~~l~~ 93 (228)
T PRK04128 31 DPVEIALRFSEYVDKIHVVDLDGAFEG--------KPKNLDVVKNIIRETGLKVQVGGGLRTYESIKDAYE 93 (228)
T ss_pred CHHHHHHHHHHhCCEEEEEECcchhcC--------CcchHHHHHHHHhhCCCCEEEcCCCCCHHHHHHHHH
Confidence 678888889876445899999999965 123456666665555555555544 56677887774
No 347
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=49.95 E-value=15 Score=39.91 Aligned_cols=60 Identities=15% Similarity=0.342 Sum_probs=43.3
Q ss_pred ccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhccCCceE
Q 002955 591 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGI 655 (863)
Q Consensus 591 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l~~l~l 655 (863)
+.-.++||-||.|.. ...+-+-+.++++.| +..|-.++++|--+..+.+.+...+..+|+
T Consensus 21 ~~DtfifDcDGVlW~----g~~~ipGs~e~l~~L-~~~gK~i~fvTNNStksr~~y~kK~~~lG~ 80 (306)
T KOG2882|consen 21 SFDTFIFDCDGVLWL----GEKPIPGSPEALNLL-KSLGKQIIFVTNNSTKSREQYMKKFAKLGF 80 (306)
T ss_pred hcCEEEEcCCcceee----cCCCCCChHHHHHHH-HHcCCcEEEEeCCCcchHHHHHHHHHHhCc
Confidence 468999999999997 333445555555565 445788999998888888887766544554
No 348
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=49.62 E-value=22 Score=37.72 Aligned_cols=28 Identities=11% Similarity=0.032 Sum_probs=24.0
Q ss_pred EEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCC
Q 002955 780 VLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ 818 (863)
Q Consensus 780 vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~ 818 (863)
++++||+.+|+...+.+|. ..++|.+|.
T Consensus 187 ~i~vGDs~~DI~aAk~AGi-----------~~I~V~~g~ 214 (237)
T TIGR01672 187 RIHYGDSDNDITAAKEAGA-----------RGIRILRAS 214 (237)
T ss_pred eEEEeCCHHHHHHHHHCCC-----------CEEEEEecC
Confidence 7999999999999999987 347888885
No 349
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=49.22 E-value=1e+02 Score=36.70 Aligned_cols=94 Identities=21% Similarity=0.159 Sum_probs=68.9
Q ss_pred cccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHH
Q 002955 344 MDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFY 423 (863)
Q Consensus 344 ld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~ 423 (863)
=-++|=.++.+.-.-++|+.-|+-. |++-+.+ +.++..+.+++++++- | .+....+ |..+.+.+
T Consensus 437 ~n~~K~~pev~~~wmqIL~~vP~Sv----l~L~~~~------~~~~~~~~l~~la~~~----G-v~~eRL~-f~p~~~~~ 500 (620)
T COG3914 437 NNYFKITPEVFALWMQILSAVPNSV----LLLKAGG------DDAEINARLRDLAERE----G-VDSERLR-FLPPAPNE 500 (620)
T ss_pred CCcccCCHHHHHHHHHHHHhCCCcE----EEEecCC------CcHHHHHHHHHHHHHc----C-CChhhee-ecCCCCCH
Confidence 3467888899988999999999865 6666532 3356677777777665 2 2333344 45578888
Q ss_pred HHHHHHHhccceeecccccCCCccceeeeee
Q 002955 424 ERIAYYVIAECCLVTAVRDGMNLIPYEYIIC 454 (863)
Q Consensus 424 el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~ 454 (863)
+-.|.|..||+++-|--+-| ..++.|++..
T Consensus 501 ~h~a~~~iADlvLDTyPY~g-~TTa~daLwm 530 (620)
T COG3914 501 DHRARYGIADLVLDTYPYGG-HTTASDALWM 530 (620)
T ss_pred HHHHhhchhheeeecccCCC-ccchHHHHHh
Confidence 99999999999998877655 5678888887
No 350
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=46.75 E-value=8.3 Score=38.22 Aligned_cols=12 Identities=50% Similarity=0.830 Sum_probs=10.9
Q ss_pred eeEecCCccccC
Q 002955 594 AILLDYDGTIMV 605 (863)
Q Consensus 594 lI~~DlDGTLl~ 605 (863)
.++||+||||++
T Consensus 1 ~vlFDlDgtLv~ 12 (183)
T TIGR01509 1 AILFDLDGVLVD 12 (183)
T ss_pred CeeeccCCceec
Confidence 479999999998
No 351
>KOG2884 consensus 26S proteasome regulatory complex, subunit RPN10/PSMD4 [Posttranslational modification, protein turnover, chaperones]
Probab=45.15 E-value=3.6e+02 Score=28.10 Aligned_cols=47 Identities=23% Similarity=0.287 Sum_probs=26.9
Q ss_pred ccEEecccccCcccCC-----CceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHH
Q 002955 475 SMLVVSEFVGCSPSLS-----GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKH 525 (863)
Q Consensus 475 g~lVlSe~~G~~~~l~-----~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~ 525 (863)
+|++.-|-+|+.--+. -.+=|+|.+--++|.||+-.+ +|.+.|.++.
T Consensus 186 sPii~ge~g~a~~~~~a~g~~f~fgvdp~~DPELAlALRlSM----EEer~rQe~a 237 (259)
T KOG2884|consen 186 SPIIQGEDGGAAAGLGANGMDFEFGVDPEDDPELALALRLSM----EEERARQERA 237 (259)
T ss_pred CceeccCcccccccccccccccccCCCcccCHHHHHHHHhhH----HHHHHHHHHH
Confidence 4455555444433331 135678888889999988543 4555555543
No 352
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=44.62 E-value=1.9e+02 Score=31.07 Aligned_cols=31 Identities=19% Similarity=0.329 Sum_probs=25.4
Q ss_pred CEEEEeCcccchHHHHHHhhCCCCeEEEEEe
Q 002955 201 DFVWVHDYHLMVLPTFLRKRFNRVKLGFFLH 231 (863)
Q Consensus 201 D~VwvhDyhl~llp~~lr~~~~~~~i~~flH 231 (863)
|+|.--...-.++..+|++++...++..-+|
T Consensus 72 dl~I~aGrrta~l~~~lkk~~~~~~vVqI~~ 102 (329)
T COG3660 72 DLIITAGRRTAPLAFYLKKKFGGIKVVQIQD 102 (329)
T ss_pred ceEEecccchhHHHHHHHHhcCCceEEEeeC
Confidence 8888889999999999999998766655554
No 353
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=44.57 E-value=35 Score=37.83 Aligned_cols=51 Identities=14% Similarity=0.069 Sum_probs=36.3
Q ss_pred CcceEEEEeCCc-chHHHHHHhhhhcCCCCCCCCcceEEEEeCC--C-----ccccceecCCHhHHHHHH
Q 002955 776 LPDFVLCIGDDR-SDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ--K-----PSKAKYYLDDTAEILRML 837 (863)
Q Consensus 776 ~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~--~-----~s~A~y~l~d~~eV~~~L 837 (863)
+++++++|||+. +|+.+-+.+|.. .+-|.-|. . .-.++|++++..++...|
T Consensus 262 ~~~~~~mIGD~~~tDI~ga~~~G~~-----------silV~tG~~~~~~~~~~~~p~~vv~~l~e~~~~i 320 (321)
T TIGR01456 262 PFHALYMVGDNPASDIIGAQNYGWF-----------SCLVKTGVYNGGDDLKECKPTLIVNDVFDAVTKI 320 (321)
T ss_pred ChheEEEEcCChhhhhhhHHhCCce-----------EEEecccccCCCCCCCCCCCCEEECCHHHHHHHh
Confidence 458999999996 999999999863 12233341 1 124678899988887765
No 354
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=44.45 E-value=49 Score=30.12 Aligned_cols=36 Identities=17% Similarity=0.293 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHH
Q 002955 351 SLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEV 390 (863)
Q Consensus 351 ~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~ 390 (863)
..|...++++++.+|+.+ +|.||..+..+..-|.++
T Consensus 49 ~~K~~~i~~i~~~fP~~k----fiLIGDsgq~DpeiY~~i 84 (100)
T PF09949_consen 49 EHKRDNIERILRDFPERK----FILIGDSGQHDPEIYAEI 84 (100)
T ss_pred hHHHHHHHHHHHHCCCCc----EEEEeeCCCcCHHHHHHH
Confidence 589999999999999988 888996655554444443
No 355
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=44.17 E-value=10 Score=36.85 Aligned_cols=33 Identities=15% Similarity=0.017 Sum_probs=27.2
Q ss_pred HHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhh
Q 002955 763 AQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 798 (863)
Q Consensus 763 l~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 798 (863)
..+.++.+ |.+++++++|||+.+|..+...++.
T Consensus 104 ~~k~l~~l---~~~p~~~i~i~Ds~~~~~aa~~ngI 136 (148)
T smart00577 104 YVKDLSLL---GRDLSNVIIIDDSPDSWPFHPENLI 136 (148)
T ss_pred EeecHHHc---CCChhcEEEEECCHHHhhcCccCEE
Confidence 45556777 9999999999999999998776654
No 356
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=43.45 E-value=35 Score=32.06 Aligned_cols=40 Identities=18% Similarity=0.315 Sum_probs=29.4
Q ss_pred HHHHhhcCCCCCEEEEeCccc-chHHHHHHhhCCCCeEEEEEe
Q 002955 190 DKVMEVISPDDDFVWVHDYHL-MVLPTFLRKRFNRVKLGFFLH 231 (863)
Q Consensus 190 ~~i~~~~~p~~D~VwvhDyhl-~llp~~lr~~~~~~~i~~flH 231 (863)
.++++..+| |+|++|...- .+++.++++.....|+.+..|
T Consensus 67 ~k~ik~~~~--DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~h 107 (139)
T PF13477_consen 67 RKIIKKEKP--DVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVH 107 (139)
T ss_pred HHHhccCCC--CEEEEecCChHHHHHHHHHHHcCCCCEEEEec
Confidence 455666677 9999999875 566666655554489999999
No 357
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=43.32 E-value=12 Score=38.22 Aligned_cols=13 Identities=15% Similarity=0.235 Sum_probs=12.0
Q ss_pred ceeEecCCccccC
Q 002955 593 RAILLDYDGTIMV 605 (863)
Q Consensus 593 rlI~~DlDGTLl~ 605 (863)
++|+||+||||++
T Consensus 1 ~~viFDldgvL~d 13 (199)
T PRK09456 1 MLYIFDLGNVIVD 13 (199)
T ss_pred CEEEEeCCCcccc
Confidence 4899999999998
No 358
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=43.00 E-value=5.3e+02 Score=29.00 Aligned_cols=28 Identities=11% Similarity=0.045 Sum_probs=23.5
Q ss_pred HHHHHHhccceeecccccCCCccceeeeeeecC
Q 002955 425 RIAYYVIAECCLVTAVRDGMNLIPYEYIICRQG 457 (863)
Q Consensus 425 l~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~ 457 (863)
...+|+.||+++..| |.+.+|++.++.|
T Consensus 229 ~~~~m~~aDlal~~S-----GT~TLE~al~g~P 256 (347)
T PRK14089 229 THKALLEAEFAFICS-----GTATLEAALIGTP 256 (347)
T ss_pred HHHHHHhhhHHHhcC-----cHHHHHHHHhCCC
Confidence 457899999999999 7788899998554
No 359
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=42.80 E-value=3.6 Score=50.44 Aligned_cols=52 Identities=23% Similarity=0.180 Sum_probs=34.4
Q ss_pred CCcEEEEecC-CCCHHHHHHHHHHHHhhcC--CCcceEEEEeCCcchHHHHHHhh
Q 002955 746 GPNIVEVKPQ-GVNKGLVAQHQLETMHQKG--MLPDFVLCIGDDRSDEDMFEVIK 797 (863)
Q Consensus 746 g~~~vEI~p~-gvsKG~al~~Ll~~l~~~g--i~~d~vlaiGD~~ND~~Mf~~ag 797 (863)
+....|+.|. .+.||.++..+...+...+ -..=...++||+..|++-+..+.
T Consensus 369 ~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~~~~~lVlsef~G~~~tl~d~aivvn 423 (732)
T KOG1050|consen 369 LYKVAEVCPVTSWRDGMNLVFLEYILCQENKKSVLVLSEFIGDDTTLEDAAIVVN 423 (732)
T ss_pred hHHhhhheeecccccccchhhhHHHHhhcccCCceEEeeeccccccccccCEEEC
Confidence 3455677664 6889999888887764443 22224568899999876665544
No 360
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=42.17 E-value=11 Score=37.63 Aligned_cols=36 Identities=25% Similarity=0.310 Sum_probs=28.3
Q ss_pred CHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHH
Q 002955 758 NKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFE 794 (863)
Q Consensus 758 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~ 794 (863)
+|..+++.+...... +.+.+.++++||+.||++||+
T Consensus 157 ~K~~~l~~~~~~~~~-~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEE-DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHH-THTCCEEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhc-CCCCCeEEEEECCHHHHHHhC
Confidence 699999999222111 456789999999999999996
No 361
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=41.25 E-value=83 Score=31.93 Aligned_cols=37 Identities=16% Similarity=0.041 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhh
Q 002955 759 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 798 (863)
Q Consensus 759 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 798 (863)
|.-.++.+++++ ++++...++|||..+|+..-..+|.
T Consensus 107 ~~gm~~~~~~~~---~iD~~~s~~VGD~~~Dlq~a~n~gi 143 (181)
T COG0241 107 KPGMLLSALKEY---NIDLSRSYVVGDRLTDLQAAENAGI 143 (181)
T ss_pred ChHHHHHHHHHh---CCCccceEEecCcHHHHHHHHHCCC
Confidence 555667777777 8999999999999999999999886
No 362
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=39.85 E-value=5.5e+02 Score=29.18 Aligned_cols=90 Identities=17% Similarity=0.182 Sum_probs=51.3
Q ss_pred HHHHHHHHHhCCCCCCceEEEEEecCCC--CCchhHHHHHHHHHHHHHHHhhcc-CCCCcccEEEEc-CCCCHHHHHHHH
Q 002955 354 LLAMEQLLSQNPSKRGKIVLVQIANPAR--GRGRDVQEVQSETHATVRRINKIF-GRPGYQPVVLID-TPLQFYERIAYY 429 (863)
Q Consensus 354 l~A~~~ll~~~p~~~~~vvLvqi~~p~r--~~~~~~~~~~~~v~~l~~~IN~~~-g~~~~~pv~~~~-~~v~~~el~aly 429 (863)
+.++|+-+.. +++.|.+.++|.- |+....+++ ..+.+++.+-|.+- +..-+.++++.. .+++..-+..-+
T Consensus 147 ~~~LE~~~~~-----~~vkl~iLCnPHNP~Grvwt~eeL-~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~ 220 (388)
T COG1168 147 FDALEKAFVD-----ERVKLFILCNPHNPTGRVWTKEEL-RKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERF 220 (388)
T ss_pred HHHHHHHHhc-----CCccEEEEeCCCCCCCccccHHHH-HHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhh
Confidence 3455544432 3356888888753 444444444 45566666665443 223466666665 566666555544
Q ss_pred HhccceeecccccCCCcccee
Q 002955 430 VIAECCLVTAVRDGMNLIPYE 450 (863)
Q Consensus 430 ~~ADv~vvtS~~EGmnLv~~E 450 (863)
+-.++.++|-.-+|||.-+.
T Consensus 221 -a~~~it~~saSKtFNlaGL~ 240 (388)
T COG1168 221 -ADNSITLTSASKTFNLAGLK 240 (388)
T ss_pred -hcceEEEeeccccccchhhh
Confidence 33345566667888876554
No 363
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=39.62 E-value=33 Score=40.52 Aligned_cols=36 Identities=22% Similarity=0.281 Sum_probs=26.3
Q ss_pred CHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhhc
Q 002955 758 NKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAA 800 (863)
Q Consensus 758 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~ 800 (863)
.|...++ +.+ |.+... .+.||+.||.+||+.++..+
T Consensus 176 ~Kv~rl~---~~~---g~~~~~-~aYgDS~sD~plL~~a~e~y 211 (497)
T PLN02177 176 HKRDAVL---KEF---GDALPD-LGLGDRETDHDFMSICKEGY 211 (497)
T ss_pred HHHHHHH---HHh---CCCCce-EEEECCccHHHHHHhCCccE
Confidence 3666665 333 544334 89999999999999999754
No 364
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=38.90 E-value=2e+02 Score=33.08 Aligned_cols=100 Identities=13% Similarity=0.118 Sum_probs=61.0
Q ss_pred EEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC-----
Q 002955 415 LIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL----- 489 (863)
Q Consensus 415 ~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l----- 489 (863)
+....+|+.+ ++..||++|- +-|+|.+ .|++..+. |+|+ +..+.++-
T Consensus 287 ~v~~~~p~~~---~l~~ad~vI~---hGG~gtt-~eaL~~gv-------------------P~vv--~P~~~DQ~~nA~r 338 (406)
T COG1819 287 IVADYVPQLE---LLPRADAVIH---HGGAGTT-SEALYAGV-------------------PLVV--IPDGADQPLNAER 338 (406)
T ss_pred EEecCCCHHH---HhhhcCEEEe---cCCcchH-HHHHHcCC-------------------CEEE--ecCCcchhHHHHH
Confidence 3455677666 7789999885 4688855 58888733 3333 22223331
Q ss_pred ----CCc--eEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHH
Q 002955 490 ----SGA--IRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQD 544 (863)
Q Consensus 490 ----~~a--l~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~ 544 (863)
.-| +...+++.+.++++++++|+++. -+.+.+++++....++...=+...+.+
T Consensus 339 ve~~G~G~~l~~~~l~~~~l~~av~~vL~~~~--~~~~~~~~~~~~~~~~g~~~~a~~le~ 397 (406)
T COG1819 339 VEELGAGIALPFEELTEERLRAAVNEVLADDS--YRRAAERLAEEFKEEDGPAKAADLLEE 397 (406)
T ss_pred HHHcCCceecCcccCCHHHHHHHHHHHhcCHH--HHHHHHHHHHHhhhcccHHHHHHHHHH
Confidence 224 44558999999999999998543 233445556666666654444444443
No 365
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=38.10 E-value=34 Score=36.15 Aligned_cols=37 Identities=24% Similarity=0.255 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHhhcCCCcceEEEEeCC-cchHHHHHHhhhh
Q 002955 760 GLVAQHQLETMHQKGMLPDFVLCIGDD-RSDEDMFEVIKSA 799 (863)
Q Consensus 760 G~al~~Ll~~l~~~gi~~d~vlaiGD~-~ND~~Mf~~ag~~ 799 (863)
...-+..++++ |+.|++|+.|||+ .||..-.+.+|..
T Consensus 171 p~If~~al~~l---~v~Pee~vhIgD~l~nD~~gA~~~G~~ 208 (237)
T KOG3085|consen 171 PRIFQLALERL---GVKPEECVHIGDLLENDYEGARNLGWH 208 (237)
T ss_pred hHHHHHHHHHh---CCChHHeEEecCccccccHhHHHcCCE
Confidence 44566778888 9999999999997 8999999999973
No 366
>TIGR00250 RNAse_H_YqgF RNAse H-fold protein YqgF. This protein family, which exhibits an RNAse H fold in crystal structure, has been proposed as a putative Holliday junction resolvase, an alternate to RuvC.
Probab=37.78 E-value=1.9e+02 Score=27.56 Aligned_cols=71 Identities=21% Similarity=0.238 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHh
Q 002955 352 LKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVI 431 (863)
Q Consensus 352 ~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ 431 (863)
..+.++..+.+++. +..+.||.|-..+|.. .+....+.+.++++..+|+ .||.+++...+..+-...|..
T Consensus 35 ~~~~~l~~~i~~~~-----~~~iVvGlP~~~dG~~-~~~a~~v~~f~~~L~~~~~----~~v~~~DEr~TT~~A~~~l~~ 104 (130)
T TIGR00250 35 PDWSRIEELLKEWT-----PDKIVVGLPLNMDGTE-GPLTERAQKFANRLEGRFG----VPVVLWDERLSTVEAESGLFA 104 (130)
T ss_pred HHHHHHHHHHHHcC-----CCEEEEeccCCCCcCc-CHHHHHHHHHHHHHHHHhC----CCEEEEcCCcCHHHHHHHHHH
Confidence 44577777777764 3368899988766655 4566778888888888775 379999999888888777765
Q ss_pred c
Q 002955 432 A 432 (863)
Q Consensus 432 A 432 (863)
+
T Consensus 105 ~ 105 (130)
T TIGR00250 105 R 105 (130)
T ss_pred c
Confidence 3
No 367
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=37.74 E-value=31 Score=34.27 Aligned_cols=45 Identities=20% Similarity=0.157 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHhhcCCCcceEEEEeCC-cchHHHHHHhhhhcCCCCCCCCcceEEEEeCCCc
Q 002955 760 GLVAQHQLETMHQKGMLPDFVLCIGDD-RSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKP 820 (863)
Q Consensus 760 G~al~~Ll~~l~~~gi~~d~vlaiGD~-~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~ 820 (863)
+.++++.++.+ ++++++|+++||. .+|+---..+| ++++-|-..+
T Consensus 96 ~~~fr~Al~~m---~l~~~~vvmVGDqL~TDVlggnr~G-------------~~tIlV~Pl~ 141 (175)
T COG2179 96 GRAFRRALKEM---NLPPEEVVMVGDQLFTDVLGGNRAG-------------MRTILVEPLV 141 (175)
T ss_pred HHHHHHHHHHc---CCChhHEEEEcchhhhhhhcccccC-------------cEEEEEEEec
Confidence 78899999999 9999999999996 56654333333 3677776543
No 368
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=36.78 E-value=45 Score=35.39 Aligned_cols=28 Identities=11% Similarity=0.012 Sum_probs=23.6
Q ss_pred EEEEeCCcchHHHHHHhhhhcCCCCCCCCcceEEEEeCC
Q 002955 780 VLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ 818 (863)
Q Consensus 780 vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~ 818 (863)
+++|||+.+|+.+.+.+|.. .+.|.+|.
T Consensus 187 ~I~IGDs~~Di~aA~~AGi~-----------~I~v~~G~ 214 (237)
T PRK11009 187 RIFYGDSDNDITAAREAGAR-----------GIRILRAA 214 (237)
T ss_pred eEEEcCCHHHHHHHHHcCCc-----------EEEEecCC
Confidence 89999999999999999873 46777774
No 369
>PLN00414 glycosyltransferase family protein
Probab=35.50 E-value=3e+02 Score=32.16 Aligned_cols=113 Identities=12% Similarity=0.134 Sum_probs=59.9
Q ss_pred EcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC----CC
Q 002955 416 IDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL----SG 491 (863)
Q Consensus 416 ~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l----~~ 491 (863)
+.+.+|+.++.+- ...++|| .+-|+| ..+|+++++.+.- +.++..|..-.+..+ .-
T Consensus 316 v~~w~PQ~~vL~h-~~v~~fv---tH~G~n-S~~Ea~~~GvP~l---------------~~P~~~dQ~~na~~~~~~~g~ 375 (446)
T PLN00414 316 WEGWVEQPLILSH-PSVGCFV---NHCGFG-SMWESLVSDCQIV---------------FIPQLADQVLITRLLTEELEV 375 (446)
T ss_pred EeccCCHHHHhcC-CccceEE---ecCchh-HHHHHHHcCCCEE---------------ecCcccchHHHHHHHHHHhCe
Confidence 3467888886553 2234454 257777 4579999844310 011112222222222 12
Q ss_pred ceEeCC-----CCHHHHHHHHHHHhCCCHHH---HHHHHHHHhhhhcc-CCHHHHHHHHHHHHHHH
Q 002955 492 AIRVNP-----WNIDAVAEAMDSALGVSDAE---KQMRHEKHYRYVST-HDVAYWARSFLQDLERA 548 (863)
Q Consensus 492 al~VnP-----~d~~~~A~ai~~aL~m~~~e---r~~r~~~~~~~v~~-~~~~~W~~~~l~~l~~~ 548 (863)
|+.+.. -+.+++++++.+++..+.++ -+++.+++.+.... -....+.++|++++.+.
T Consensus 376 g~~~~~~~~~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~~~~~~~~gg~ss~l~~~v~~~~~~ 441 (446)
T PLN00414 376 SVKVQREDSGWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKLKETLVSPGLLSGYADKFVEALENE 441 (446)
T ss_pred EEEeccccCCccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHh
Confidence 455532 46799999999999765322 23333333333333 33356688888888553
No 370
>PRK05632 phosphate acetyltransferase; Reviewed
Probab=34.99 E-value=9.6e+02 Score=29.67 Aligned_cols=177 Identities=12% Similarity=0.072 Sum_probs=97.8
Q ss_pred CCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC--------
Q 002955 418 TPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-------- 489 (863)
Q Consensus 418 ~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l-------- 489 (863)
+..+.+....+++.-+++++|+-|+-.=+.++|+-..+ ++-+.+|++...-.++.+
T Consensus 232 gAm~~~~~~~~l~~~~lVIt~gdR~Di~l~al~~~~~~----------------~~~a~lIlTgg~~~~~~v~~l~~~a~ 295 (684)
T PRK05632 232 CARSIPNMLEHLKPGSLVVTPGDRSDVILAALLAAMNG----------------PPIAGLLLTGGYEPDPRIAKLCEGAF 295 (684)
T ss_pred EecchHHHHHhccCCcEEEeCCChHHHHHHHHHhcccC----------------CCceEEEEcCCCCCCHHHHHHHhhcc
Confidence 44556667777776666666666665555555552111 012235554333222222
Q ss_pred -CC-ceEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhccC-CHHHHHHHHHHHHHHHHHhhccccccccCcCcce
Q 002955 490 -SG-AIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTH-DVAYWARSFLQDLERACRDHMRRRCWGIGFGLGF 566 (863)
Q Consensus 490 -~~-al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~-~~~~W~~~~l~~l~~~~~~~~~~~~~~~g~g~~~ 566 (863)
.+ .++.-|+|+-++|..|.++..--..+-..+.+...+++.+| |..+|.+. +. + .. .
T Consensus 296 ~~~ipVl~t~~dT~~ta~~i~~~~~~i~~~d~~ki~~~~~~~~~~vD~~~l~~~-l~-~---~~---------------~ 355 (684)
T PRK05632 296 ETGLPVLSVDTNTYQTALRLQSFNGEVPVDDHERIETVLELVASHVDTDELLER-LT-A---TS---------------E 355 (684)
T ss_pred cCCCCEEEecCCHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhCCHHHHHHH-hc-c---CC---------------C
Confidence 12 46777999999999999876432222233456667777777 77777664 22 0 00 0
Q ss_pred eEeecCcccccCCHHHHHHHHHhcccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHH
Q 002955 567 RVVALDPNFRKLSIDHIVSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEW 646 (863)
Q Consensus 567 ~~~~~~~~f~~l~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~ 646 (863)
|...++|. .-...+.+.-+..++|+++-. . -.++++++...+ .+.|+.-.+.-|+. +.+++.
T Consensus 356 ~~~~~~p~---~~~~~l~~~a~~~~~~i~~~e------------~-~d~~~l~Aa~~~-~~~g~~~~iLvG~~-~~I~~~ 417 (684)
T PRK05632 356 RSRRLSPP---AFRYQLTERARAAKKRIVLPE------------G-DEPRTLKAAAIC-LERGIADCVLLGNP-EEIRRV 417 (684)
T ss_pred CCCCcCHH---HHHHHHHHHHhcCCCEEEEeC------------C-CCHHHHHHHHHH-HHcCCceEEEECCH-HHHHHH
Confidence 11123441 123455555555555555532 1 268888888885 77787776777886 355555
Q ss_pred hh
Q 002955 647 FS 648 (863)
Q Consensus 647 ~~ 648 (863)
+.
T Consensus 418 ~~ 419 (684)
T PRK05632 418 AA 419 (684)
T ss_pred HH
Confidence 54
No 371
>PRK13587 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=31.62 E-value=1.1e+02 Score=32.35 Aligned_cols=62 Identities=18% Similarity=0.322 Sum_probs=45.0
Q ss_pred CHHHHHHHHHhc--ccceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcC-CChhhHHHHhh
Q 002955 579 SIDHIVSAYKRT--KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSG-KDRDTLAEWFS 648 (863)
Q Consensus 579 ~~~~i~~~y~~s--~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TG-R~~~~l~~~~~ 648 (863)
+...+++.|... -..+.++|+||+.-. .+.+.+.++++++..+.+|.+--| |+.+.+++++.
T Consensus 32 dp~~~a~~~~~~~Ga~~l~ivDLd~a~~~--------~~~n~~~I~~i~~~~~~pi~vGGGIrs~e~v~~~l~ 96 (234)
T PRK13587 32 SAEESIAYYSQFECVNRIHIVDLIGAKAQ--------HAREFDYIKSLRRLTTKDIEVGGGIRTKSQIMDYFA 96 (234)
T ss_pred CHHHHHHHHHhccCCCEEEEEECcccccC--------CcchHHHHHHHHhhcCCeEEEcCCcCCHHHHHHHHH
Confidence 556788989883 378999999999755 345677777777666667666555 66777888874
No 372
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=31.27 E-value=33 Score=34.65 Aligned_cols=38 Identities=8% Similarity=0.069 Sum_probs=27.9
Q ss_pred CCCHHHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhhcc
Q 002955 612 SPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 650 (863)
Q Consensus 612 ~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~l 650 (863)
.+.|..++.++.. +++++.|+|+||-.-..+..++..+
T Consensus 73 ~Idp~fKef~e~i-ke~di~fiVvSsGm~~fI~~lfe~i 110 (220)
T COG4359 73 KIDPGFKEFVEWI-KEHDIPFIVVSSGMDPFIYPLFEGI 110 (220)
T ss_pred ccCccHHHHHHHH-HHcCCCEEEEeCCCchHHHHHHHhh
Confidence 4556667777764 7788888888888888888877543
No 373
>cd01570 NAPRTase_A Nicotinate phosphoribosyltransferase (NAPRTase), subgroup A. Nicotinate phosphoribosyltransferase catalyses the formation of NAMN and PPi from 5-phosphoribosy -1-pyrophosphate (PRPP) and nicotinic acid, this is the first, and also rate limiting, reaction in the NAD salvage synthesis. This salvage pathway serves to recycle NAD degradation products. This subgroup is present in bacteria and eukaryota (except funghi).
Probab=30.78 E-value=4.9e+02 Score=29.01 Aligned_cols=108 Identities=17% Similarity=0.204 Sum_probs=58.4
Q ss_pred ccccCchHHHhhcCCchHHHHHHHHHHHhCCCeEEEeecCccccc-CHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCC
Q 002955 304 PVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFK-GISLKLLAMEQLLSQNPSKRGKIVLVQIANPARG 382 (863)
Q Consensus 304 p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~K-Gi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~ 382 (863)
|+|...-.+-.... ......+.+.+.|++ ..++=+|-.|..+ |+...++.++.+.++...+ .-|.+- |
T Consensus 189 ~~GT~aHs~i~~~~--~e~~A~~~~~~~~p~-~~i~L~Dtyd~~~~~~~~~l~~~~~l~~~~~~~----~gvR~D--S-- 257 (327)
T cd01570 189 VSGTMAHSFVQAFD--DELAAFRAFAEAYPD-NFTLLVDTYDTLRSGLPNAIAVAKELGALGYRL----VGVRID--S-- 257 (327)
T ss_pred cccccHHHHHHhhh--hHHHHHHHHHHHCCC-CcEEEEEcccchhhhHHHHHHHHHHHHhhCCCc----eEEEeC--C--
Confidence 56665444432211 122334445567776 4455669998884 9999999998875532222 123221 1
Q ss_pred CchhHHHHHHHHHHHHHHHhhccCCCCcccEE-EEcCCCCHHHHHHHHHh
Q 002955 383 RGRDVQEVQSETHATVRRINKIFGRPGYQPVV-LIDTPLQFYERIAYYVI 431 (863)
Q Consensus 383 ~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~-~~~~~v~~~el~aly~~ 431 (863)
.+-.++-.++.+.-++ .|+.|+. ++.+.++.+.+..++..
T Consensus 258 --Gd~~~~~~~~r~~l~~-------~G~~~~~Iv~Sdgld~~~i~~l~~~ 298 (327)
T cd01570 258 --GDLAYLSKEARKMLDE-------AGLTKVKIVASNDLDEYTIAALNAQ 298 (327)
T ss_pred --CCHHHHHHHHHHHHHH-------CCCCCcEEEEeCCCCHHHHHHHHHC
Confidence 1222233333322222 2444543 45678999999998864
No 374
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=30.67 E-value=76 Score=33.06 Aligned_cols=15 Identities=33% Similarity=0.636 Sum_probs=13.5
Q ss_pred ccceeEecCCccccC
Q 002955 591 KNRAILLDYDGTIMV 605 (863)
Q Consensus 591 ~~rlI~~DlDGTLl~ 605 (863)
+++.++||+||||++
T Consensus 1 ~~~avIFD~DGvLvD 15 (221)
T COG0637 1 MIKAVIFDMDGTLVD 15 (221)
T ss_pred CCcEEEEcCCCCcCc
Confidence 368999999999998
No 375
>PRK00109 Holliday junction resolvase-like protein; Reviewed
Probab=30.25 E-value=2.8e+02 Score=26.69 Aligned_cols=70 Identities=20% Similarity=0.205 Sum_probs=49.7
Q ss_pred HHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcc
Q 002955 354 LLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAE 433 (863)
Q Consensus 354 l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~AD 433 (863)
+..+.++.++++ +..+.||.|...+|.. .+....+.+.++++..+|+ .||++.+...+..+-...|..+.
T Consensus 43 ~~~l~~~i~~~~-----i~~iVvGlP~~~~G~~-~~~~~~v~~f~~~L~~~~~----~~v~~~DEr~TT~~A~~~l~~~~ 112 (138)
T PRK00109 43 WDRLEKLIKEWQ-----PDGLVVGLPLNMDGTE-GPRTERARKFANRLEGRFG----LPVVLVDERLSTVEAERALADVG 112 (138)
T ss_pred HHHHHHHHHHhC-----CCEEEEeccCCCCCCc-CHHHHHHHHHHHHHHHHhC----CCEEEEcCCcCHHHHHHHHHHcC
Confidence 556666666653 4478899997666544 3456677788888877773 47999999998888777776543
No 376
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=30.03 E-value=4.4e+02 Score=29.22 Aligned_cols=121 Identities=16% Similarity=0.194 Sum_probs=75.6
Q ss_pred EEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEE-EecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEE
Q 002955 337 VMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQ-IANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVL 415 (863)
Q Consensus 337 vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvq-i~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~ 415 (863)
|+|| -.=|++-...+.|.++.+.+.. + +.++. .+.|+ + .+++.++|.+.+.++ ||.. .+..
T Consensus 149 IlvG-NSgd~SN~Hie~L~~l~~~~~~--~----v~ii~PlsYp~-g----n~~Yi~~V~~~~~~l---F~~~---~~~~ 210 (322)
T PRK02797 149 ILVG-NSGDRSNRHIEALRALHQQFGD--N----VKIIVPMGYPA-N----NQAYIEEVRQAGLAL---FGAE---NFQI 210 (322)
T ss_pred EEEe-CCCCCcccHHHHHHHHHHHhCC--C----eEEEEECCcCC-C----CHHHHHHHHHHHHHh---cCcc---cEEe
Confidence 3344 4567888888888877666432 2 22332 23232 1 245666666665544 6533 3667
Q ss_pred EcCCCCHHHHHHHHHhccceeeccc-ccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC-CCce
Q 002955 416 IDTPLQFYERIAYYVIAECCLVTAV-RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-SGAI 493 (863)
Q Consensus 416 ~~~~v~~~el~aly~~ADv~vvtS~-~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l-~~al 493 (863)
+++.++.+|..++++.+|+.++.-- ..|+|...+=.-. +.++++|+-.-....+ .-++
T Consensus 211 L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi~~--------------------G~~v~l~r~n~fwqdl~e~gv 270 (322)
T PRK02797 211 LTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCLLIQL--------------------GKPVVLSRDNPFWQDLTEQGL 270 (322)
T ss_pred hhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHHHHHC--------------------CCcEEEecCCchHHHHHhCCC
Confidence 8899999999999999999988875 5788866432111 4567777666555555 3354
Q ss_pred Ee
Q 002955 494 RV 495 (863)
Q Consensus 494 ~V 495 (863)
-|
T Consensus 271 ~V 272 (322)
T PRK02797 271 PV 272 (322)
T ss_pred eE
Confidence 44
No 377
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=29.97 E-value=1.4e+02 Score=33.65 Aligned_cols=106 Identities=14% Similarity=0.118 Sum_probs=70.4
Q ss_pred CHHHHHHHHHhccceeeccc---ccC---CCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccCC-C-c
Q 002955 421 QFYERIAYYVIAECCLVTAV---RDG---MNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS-G-A 492 (863)
Q Consensus 421 ~~~el~aly~~ADv~vvtS~---~EG---mnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~-~-a 492 (863)
+.......|+.-|+.+.=+. -++ ++.-..|+++| +|+++.+--.|.-.-+. | .
T Consensus 247 ~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiagc-------------------~~~liT~~~~~~e~~f~pgk~ 307 (373)
T COG4641 247 PKDGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAGC-------------------GGFLITDYWKDLEKFFKPGKD 307 (373)
T ss_pred ccchhhhcccccceeeeecHHHHHhhcCCchhhHHHHhhc-------------------CCccccccHHHHHHhcCCchh
Confidence 34666777777777654332 233 37788999999 56676666655443342 2 3
Q ss_pred eEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhhh-ccCCHHHHHHHHHHHHHH
Q 002955 493 IRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYV-STHDVAYWARSFLQDLER 547 (863)
Q Consensus 493 l~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 547 (863)
+++ -.|..++.+.+...+.-+ +||++..+..++.| ..|+...=+..++..+..
T Consensus 308 ~iv-~~d~kdl~~~~~yll~h~-~erkeiae~~ye~V~~~ht~~~r~~~~~~~i~s 361 (373)
T COG4641 308 IIV-YQDSKDLKEKLKYLLNHP-DERKEIAECAYERVLARHTYEERIFKLLNEIAS 361 (373)
T ss_pred eEE-ecCHHHHHHHHHHHhcCc-chHHHHHHhhHHHHHHhccHHHHHHHHHHHHHH
Confidence 444 578999999999999765 55666666666665 448877777777776664
No 378
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=29.80 E-value=95 Score=30.56 Aligned_cols=40 Identities=10% Similarity=-0.013 Sum_probs=31.6
Q ss_pred CHHHHHHHHHHHHhhcCCCcceEEEEeCCcchHHHHHHhhhh
Q 002955 758 NKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 799 (863)
Q Consensus 758 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 799 (863)
-|...++.|.+.+.. ....++++|||..+|..+.+.+|..
T Consensus 102 ~K~~~l~~i~~~~~~--~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 102 FKIACLRDIKSLFPP--QGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred HHHHHHHHHHHhcCC--CCCCEEEEeCCCchhHHHHHHcCCC
Confidence 478888888876521 2346788999999999999999974
No 379
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=29.25 E-value=6.8e+02 Score=31.49 Aligned_cols=136 Identities=13% Similarity=0.086 Sum_probs=82.5
Q ss_pred CCeEEEeecCcccccCHHH-HHHHHHHHH--HhCCCCC-CceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCC
Q 002955 334 GQIVMLGVDDMDIFKGISL-KLLAMEQLL--SQNPSKR-GKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPG 409 (863)
Q Consensus 334 ~~~vil~Vdrld~~KGi~~-~l~A~~~ll--~~~p~~~-~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~ 409 (863)
+...++.+-|+..-|--.+ .|.-++++. ..+|+.. ..+++|.-|-.+-++. .-.++-+.|..+++.||..=...+
T Consensus 529 ~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~-~aK~iIklI~~va~~in~Dp~v~~ 607 (797)
T cd04300 529 DSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGYY-MAKLIIKLINAVADVVNNDPDVGD 607 (797)
T ss_pred CccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCcH-HHHHHHHHHHHHHHHhccChhcCC
Confidence 4567888999999987777 666655553 3456522 3466666654432222 224566778888888887544445
Q ss_pred cccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC
Q 002955 410 YQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL 489 (863)
Q Consensus 410 ~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l 489 (863)
+-.|+|+.. ..-.--..++.+|||-.-+|+ .++|| |+.+ +|.-++ .|+|-+|..-|+-.++
T Consensus 608 ~lkVVFlen-Y~VslAe~iipaaDvseqis~------ag~EA--SGTs--nMK~~l--------NGaltlgtlDGanvEi 668 (797)
T cd04300 608 KLKVVFLPN-YNVSLAEKIIPAADLSEQIST------AGKEA--SGTG--NMKFML--------NGALTIGTLDGANVEI 668 (797)
T ss_pred ceEEEEeCC-CChHHHHHhhhhhhhhhhCCC------CCccc--cCCc--hhhHHh--------cCceeeecccchhHHH
Confidence 556888763 445555578899999777765 55663 2222 121121 3566666666654443
No 380
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=26.09 E-value=6e+02 Score=28.34 Aligned_cols=233 Identities=15% Similarity=0.174 Sum_probs=94.6
Q ss_pred EEEeCcccchHHHHHHhhCCCCeEEEEEeCCCCChhHhhcCC----ChHHHHHHHHhCCEecccCHHHHHHHHHHHHhhh
Q 002955 203 VWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLP----IRDELLRALLNADLIGFHTFDYARHFLSCCSRML 278 (863)
Q Consensus 203 VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp----~r~eil~~ll~~dligF~t~~~~~~Fl~~~~r~l 278 (863)
+||.|.++..+-.+.. .++.++.+.||=- |--.+....+ .+....+....+|.+-..+....+.|.+ + .
T Consensus 81 ~~i~~~~~~~~~~~~~--~~~~~~i~lwHG~-~~K~~g~~~~~~~~~~~~~~~~~~~~d~~~~~s~~~~~~~~~-~---f 153 (369)
T PF04464_consen 81 YIISDSYFPDLIYFKK--RKNQKYIQLWHGI-PLKKIGYDSPDNKNYRKNYKRNYRNYDYFIVSSEFEKEIFKK-A---F 153 (369)
T ss_dssp EEEESS---T--TS-----TTSEEEE--SS---SB--GGG-S---TS-HHHHHHHTT-SEEEESSHHHHHHHHH-H---T
T ss_pred EEEECCCCCccccccc--CCCcEEEEecCCC-cccccchhccccccchhhhhhhccCCcEEEECCHHHHHHHHH-H---h
Confidence 7777744433222211 2478999999955 5433332222 1235667777889776666544444433 2 2
Q ss_pred CceecccCceeeEEEcCeEEEEEEeccccCchHHHhhcCCchHHHHHHHHHHHh---CCCeEEEeecCcccccC------
Q 002955 279 GVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMDIFKG------ 349 (863)
Q Consensus 279 g~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~~KG------ 349 (863)
+... . ++...|.- ++.......... .+++++.+ .++++||+.=.......
T Consensus 154 ~~~~--~---------------~i~~~G~P--R~D~l~~~~~~~--~~~i~~~~~~~~~~k~ILyaPT~R~~~~~~~~~~ 212 (369)
T PF04464_consen 154 GYPE--D---------------KILVTGYP--RNDYLFNKSKEN--RNRIKKKLGIDKDKKVILYAPTWRDNSSNEYFKF 212 (369)
T ss_dssp T--G--G---------------GEEES--G--GGHHHHHSTT-H--HHHHHHHTT--SS-EEEEEE----GGG--GGSS-
T ss_pred ccCc--c---------------eEEEeCCC--eEhHHhccCHHH--HHHHHHHhccCCCCcEEEEeeccccccccccccc
Confidence 2211 0 12234432 333222221111 45566555 67889999854322222
Q ss_pred HHHHHHHHHHHH-HhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHH
Q 002955 350 ISLKLLAMEQLL-SQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAY 428 (863)
Q Consensus 350 i~~~l~A~~~ll-~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~al 428 (863)
.... .-+++|. ...+++ +|+.-. .|. .+...... ......|+.+.. ..++..+
T Consensus 213 ~~~~-~~~~~l~~~~~~~~----~li~k~------Hp~---~~~~~~~~---------~~~~~~i~~~~~---~~~~~~l 266 (369)
T PF04464_consen 213 FFSD-LDFEKLNFLLKNNY----VLIIKP------HPN---MKKKFKDF---------KEDNSNIIFVSD---NEDIYDL 266 (369)
T ss_dssp ---T-T-HHHHHHHHTTTE----EEEE--------SHH---HHTT-------------TT-TTTEEE-TT----S-HHHH
T ss_pred cccc-cCHHHHHHHhCCCc----EEEEEe------Cch---hhhchhhh---------hccCCcEEECCC---CCCHHHH
Confidence 1211 1233331 223343 344221 121 11111110 011123555543 3389999
Q ss_pred HHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEe--ccc------ccCcccC---CCceEeCC
Q 002955 429 YVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVV--SEF------VGCSPSL---SGAIRVNP 497 (863)
Q Consensus 429 y~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVl--Se~------~G~~~~l---~~al~VnP 497 (863)
+..||++| | =+.=+..||+.+..| +|. -+. .|..... ..|-.+
T Consensus 267 l~~aDiLI-T----DySSi~fD~~~l~KP-------------------iify~~D~~~Y~~~rg~~~~~~~~~pg~~~-- 320 (369)
T PF04464_consen 267 LAAADILI-T----DYSSIIFDFLLLNKP-------------------IIFYQPDLEEYEKERGFYFDYEEDLPGPIV-- 320 (369)
T ss_dssp HHT-SEEE-E----SS-THHHHHGGGT---------------------EEEE-TTTTTTTTTSSBSS-TTTSSSS-EE--
T ss_pred HHhcCEEE-E----echhHHHHHHHhCCC-------------------EEEEeccHHHHhhccCCCCchHhhCCCcee--
Confidence 99999977 1 123378999998432 332 111 2322222 113333
Q ss_pred CCHHHHHHHHHHHhCCCH
Q 002955 498 WNIDAVAEAMDSALGVSD 515 (863)
Q Consensus 498 ~d~~~~A~ai~~aL~m~~ 515 (863)
.+.+++.++|..++..+.
T Consensus 321 ~~~~eL~~~i~~~~~~~~ 338 (369)
T PF04464_consen 321 YNFEELIEAIENIIENPD 338 (369)
T ss_dssp SSHHHHHHHHTTHHHHHH
T ss_pred CCHHHHHHHHHhhhhCCH
Confidence 578999999999886543
No 381
>PRK14057 epimerase; Provisional
Probab=23.01 E-value=5.6e+02 Score=27.51 Aligned_cols=65 Identities=9% Similarity=0.117 Sum_probs=46.1
Q ss_pred eEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHH-hccceeecc
Q 002955 371 IVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYV-IAECCLVTA 439 (863)
Q Consensus 371 vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~-~ADv~vvtS 439 (863)
.+||+-.+|..+..+-.++..+.+.++.+.+..+ ++.-.+..+|.++.+.+..+.. .||++|.-|
T Consensus 157 ~VLvMtV~PGfgGQ~Fi~~~l~KI~~lr~~~~~~----~~~~~IeVDGGI~~~ti~~l~~aGad~~V~GS 222 (254)
T PRK14057 157 VIQLLAVNPGYGSKMRSSDLHERVAQLLCLLGDK----REGKIIVIDGSLTQDQLPSLIAQGIDRVVSGS 222 (254)
T ss_pred EEEEEEECCCCCchhccHHHHHHHHHHHHHHHhc----CCCceEEEECCCCHHHHHHHHHCCCCEEEECh
Confidence 5588888887766555556666777666666432 3444567899999998887776 499999876
No 382
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=22.72 E-value=6.8e+02 Score=30.38 Aligned_cols=84 Identities=19% Similarity=0.290 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCccc-EEEEcCCCCHHHHHHHH
Q 002955 351 SLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQP-VVLIDTPLQFYERIAYY 429 (863)
Q Consensus 351 ~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~p-v~~~~~~v~~~el~aly 429 (863)
+..|..+.++|++-|+-+ |+...-|.-++ +..+..++++ |.+| -+.|..-...+|=..-+
T Consensus 773 P~~l~~W~~ILk~VPnS~----LwllrfPa~ge----~rf~ty~~~~-----------Gl~p~riifs~va~k~eHvrr~ 833 (966)
T KOG4626|consen 773 PSTLQMWANILKRVPNSV----LWLLRFPAVGE----QRFRTYAEQL-----------GLEPDRIIFSPVAAKEEHVRRG 833 (966)
T ss_pred HHHHHHHHHHHHhCCcce----eEEEeccccch----HHHHHHHHHh-----------CCCccceeeccccchHHHHHhh
Confidence 567889999999999876 77777777554 2333333322 2222 12333344567888889
Q ss_pred HhccceeecccccCCCccceeeeee
Q 002955 430 VIAECCLVTAVRDGMNLIPYEYIIC 454 (863)
Q Consensus 430 ~~ADv~vvtS~~EGmnLv~~Ea~a~ 454 (863)
..||||+-|++.-|-- +-.|-+.+
T Consensus 834 ~LaDv~LDTplcnGhT-Tg~dvLw~ 857 (966)
T KOG4626|consen 834 QLADVCLDTPLCNGHT-TGMDVLWA 857 (966)
T ss_pred hhhhhcccCcCcCCcc-cchhhhcc
Confidence 9999999999987753 33454554
No 383
>KOG2670 consensus Enolase [Carbohydrate transport and metabolism]
Probab=22.41 E-value=70 Score=35.00 Aligned_cols=41 Identities=22% Similarity=0.542 Sum_probs=31.5
Q ss_pred eCChHhHhhHhhhccccccccccccCCCCCCCCCCccChhhHHHHHHHHHH
Q 002955 137 FIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKI 187 (863)
Q Consensus 137 ~l~~~~~~~~y~gf~~~~lWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~ 187 (863)
|++.+.+-..|..|+|.. |+ +.+. ..|++++|++|...+..
T Consensus 272 ~~s~~~L~dlY~~~~k~y--Pi--vSiE------DPFdqdDw~~w~~~~~~ 312 (433)
T KOG2670|consen 272 WLSGDQLADLYKSFIKDY--PI--VSIE------DPFDQDDWEAWSKFFKE 312 (433)
T ss_pred ccCHHHHHHHHHHHHhcC--Ce--eeec------CCcchhhHHHHHHHhhc
Confidence 588899999999999984 55 2221 36999999999876653
No 384
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=22.07 E-value=90 Score=33.43 Aligned_cols=57 Identities=16% Similarity=0.204 Sum_probs=38.7
Q ss_pred eeEecCCccccCCCC-----------------------CCCCCCHHHHHHHHHhhc-----CCCCeEEEEcCCChhhHHH
Q 002955 594 AILLDYDGTIMVPGS-----------------------ISTSPNAEAVAILDNLCR-----DPKNVVFLVSGKDRDTLAE 645 (863)
Q Consensus 594 lI~~DlDGTLl~~~~-----------------------~~~~~s~~~~~aL~~L~~-----d~g~~V~I~TGR~~~~l~~ 645 (863)
=|+||-|++|.+..+ ....|-...+..|.+|.+ ..-+.++|+|.|+...-++
T Consensus 123 RIAFDgDaVLfsDesE~vy~~~GL~~F~~~E~~~a~~Pl~~GP~~~fl~~L~~lQ~~~~~~~~piRtalVTAR~apah~R 202 (264)
T PF06189_consen 123 RIAFDGDAVLFSDESERVYQEQGLEAFHEHEKENADKPLPEGPFKDFLKKLSKLQKKFPPENSPIRTALVTARSAPAHER 202 (264)
T ss_pred EEEEcCCeEeecCcchHhHHhccHHHHHHHHHHhccCCCcCCCHHHHHHHHHHHHHhcCCCCCceEEEEEEcCCCchhHH
Confidence 379999999997431 123345677777777622 3457899999999877666
Q ss_pred Hhhcc
Q 002955 646 WFSSC 650 (863)
Q Consensus 646 ~~~~l 650 (863)
.+.-+
T Consensus 203 vI~TL 207 (264)
T PF06189_consen 203 VIRTL 207 (264)
T ss_pred HHHHH
Confidence 66544
No 385
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=21.68 E-value=4.5e+02 Score=31.18 Aligned_cols=77 Identities=10% Similarity=0.024 Sum_probs=46.9
Q ss_pred EEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEeccccc----CcccC
Q 002955 414 VLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVG----CSPSL 489 (863)
Q Consensus 414 ~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G----~~~~l 489 (863)
+++.+.+|+.++.+- ..+++|| .+-|+| ...||+.++.| +|+--+.+ .+..+
T Consensus 348 v~i~~w~Pq~~lL~h-p~v~~fI---tHGG~~-s~~Eal~~GvP-------------------~v~iP~~~DQ~~Na~rv 403 (507)
T PHA03392 348 VLTQKWFPQRAVLKH-KNVKAFV---TQGGVQ-STDEAIDALVP-------------------MVGLPMMGDQFYNTNKY 403 (507)
T ss_pred eEEecCCCHHHHhcC-CCCCEEE---ecCCcc-cHHHHHHcCCC-------------------EEECCCCccHHHHHHHH
Confidence 355678888776542 4466665 256655 66899998543 33322211 22222
Q ss_pred ---CCceEeCC--CCHHHHHHHHHHHhCCC
Q 002955 490 ---SGAIRVNP--WNIDAVAEAMDSALGVS 514 (863)
Q Consensus 490 ---~~al~VnP--~d~~~~A~ai~~aL~m~ 514 (863)
..|+.+++ .+.+++++||.++|+.+
T Consensus 404 ~~~G~G~~l~~~~~t~~~l~~ai~~vl~~~ 433 (507)
T PHA03392 404 VELGIGRALDTVTVSAAQLVLAIVDVIENP 433 (507)
T ss_pred HHcCcEEEeccCCcCHHHHHHHHHHHhCCH
Confidence 22666654 46799999999999864
No 386
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=21.58 E-value=7.1e+02 Score=27.62 Aligned_cols=88 Identities=18% Similarity=0.173 Sum_probs=50.4
Q ss_pred CCCeEEEeecCcccccCHH-HHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcc
Q 002955 333 KGQIVMLGVDDMDIFKGIS-LKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQ 411 (863)
Q Consensus 333 ~~~~vil~Vdrld~~KGi~-~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~ 411 (863)
.++.+++..+--...|--+ +.+.++-+.|.+. .++ ++.+|.|. ++ +. ...+++++.++ -.
T Consensus 182 ~~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~-~~~----vvl~ggp~----e~--e~-~~~~~i~~~~~-------~~ 242 (352)
T PRK10422 182 TQNYVVIQPTARQIFKCWDNDKFSAVIDALQAR-GYE----VVLTSGPD----KD--DL-ACVNEIAQGCQ-------TP 242 (352)
T ss_pred CCCeEEEecCCCccccCCCHHHHHHHHHHHHHC-CCe----EEEEcCCC----hH--HH-HHHHHHHHhcC-------CC
Confidence 3466777877666677655 3445554444432 333 55566543 11 11 12223332221 11
Q ss_pred cEEEEcCCCCHHHHHHHHHhccceeecc
Q 002955 412 PVVLIDTPLQFYERIAYYVIAECCLVTA 439 (863)
Q Consensus 412 pv~~~~~~v~~~el~aly~~ADv~vvtS 439 (863)
+++-+.|..+..|+.++++.||++|-+-
T Consensus 243 ~~~~l~g~~sL~el~ali~~a~l~v~nD 270 (352)
T PRK10422 243 PVTALAGKTTFPELGALIDHAQLFIGVD 270 (352)
T ss_pred ccccccCCCCHHHHHHHHHhCCEEEecC
Confidence 3555678889999999999999988653
No 387
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=21.27 E-value=2.5e+02 Score=30.40 Aligned_cols=82 Identities=10% Similarity=0.032 Sum_probs=49.5
Q ss_pred CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCccc
Q 002955 333 KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQP 412 (863)
Q Consensus 333 ~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~p 412 (863)
.++++++++|..+.. ..++ .++..|+++ ++.+|.+. .+ .+ ...
T Consensus 191 ~~~~iLv~~gg~~~~----~~~~----~l~~~~~~~----~~v~g~~~----~~---~~------------------~~n 233 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG----DLIE----ALKALPDYQ----FIVFGPNA----AD---PR------------------PGN 233 (318)
T ss_pred CCCEEEEEeCCCcHH----HHHH----HHHhCCCCe----EEEEcCCc----cc---cc------------------CCC
Confidence 467899999988766 3333 344467665 55555321 00 00 012
Q ss_pred EEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecC
Q 002955 413 VVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQG 457 (863)
Q Consensus 413 v~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~ 457 (863)
|.+. .....++..++..||++|-.+ |+| +..|+++++.|
T Consensus 234 i~~~--~~~~~~~~~~m~~ad~vIs~~---G~~-t~~Ea~~~g~P 272 (318)
T PF13528_consen 234 IHVR--PFSTPDFAELMAAADLVISKG---GYT-TISEALALGKP 272 (318)
T ss_pred EEEe--ecChHHHHHHHHhCCEEEECC---CHH-HHHHHHHcCCC
Confidence 3322 234578999999999988664 666 35699998543
No 388
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=21.13 E-value=6.1e+02 Score=31.85 Aligned_cols=136 Identities=15% Similarity=0.100 Sum_probs=81.5
Q ss_pred CCeEEEeecCcccccCHHH-HHHHHHHHH--HhCCCCC-CceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCC
Q 002955 334 GQIVMLGVDDMDIFKGISL-KLLAMEQLL--SQNPSKR-GKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPG 409 (863)
Q Consensus 334 ~~~vil~Vdrld~~KGi~~-~l~A~~~ll--~~~p~~~-~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~ 409 (863)
+-..++.+-|+..-|--.+ .|.-+++++ ..+|+.. ..+++|..|-..-++ ..-.++-+.|.++++.||..=...+
T Consensus 528 ~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y-~~aK~iIklI~~va~~in~Dp~v~~ 606 (798)
T PRK14985 528 QAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGY-YLAKNIIFAINKVAEVINNDPLVGD 606 (798)
T ss_pred hhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCc-HHHHHHHHHHHHHHHHhcCChhhCC
Confidence 3456778999998887776 666655543 3456632 346676666443222 1224456678888888886544445
Q ss_pred cccEEEEcCCCCHHHHHHHHHhccceeecccccCCCccceeeeeeecCCcccccccCCCCCCCCCccEEecccccCcccC
Q 002955 410 YQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL 489 (863)
Q Consensus 410 ~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l 489 (863)
.-.|+|+. ...-.--..++.+|||-.-+|. .++|| |+.+ +|..++ .|+|-+|..-|+..++
T Consensus 607 ~lkVVFle-nY~VslAe~lipaaDvseqis~------ag~EA--SGTs--nMK~am--------NGaLtlgtlDGanvEi 667 (798)
T PRK14985 607 KLKVVFLP-DYCVSAAELLIPAADISEQIST------AGKEA--SGTG--NMKLAL--------NGALTVGTLDGANVEI 667 (798)
T ss_pred ceeEEEeC-CCChHHHHHHhhhhhhhhhCCC------CCccc--cCcc--hhHHHh--------cCceeeecccchHHHH
Confidence 55688876 3455555678999999877765 56664 3222 122222 3667777666654443
No 389
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=21.11 E-value=1.3e+02 Score=34.52 Aligned_cols=33 Identities=6% Similarity=0.006 Sum_probs=28.9
Q ss_pred HHHHHHHhccceeecccccCCCccceeeeeeec
Q 002955 424 ERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQ 456 (863)
Q Consensus 424 el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~ 456 (863)
+.-.+-+.+.+.|+||.+|+.|-+|.|..+.+-
T Consensus 493 DYeeFVRGCHLGVFPSYYEPWGYTPAECTVMGi 525 (692)
T KOG3742|consen 493 DYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGI 525 (692)
T ss_pred CHHHHhccccccccccccCCCCCCchheEEecc
Confidence 456778899999999999999999999999843
No 390
>KOG0331 consensus ATP-dependent RNA helicase [RNA processing and modification]
Probab=20.83 E-value=4.7e+02 Score=31.08 Aligned_cols=91 Identities=20% Similarity=0.209 Sum_probs=64.4
Q ss_pred EEeecCcccccCHHHHHHHHHHHHH-hCCCCCC--ceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhhccCCCCcccEE
Q 002955 338 MLGVDDMDIFKGISLKLLAMEQLLS-QNPSKRG--KIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVV 414 (863)
Q Consensus 338 il~Vdrld~~KGi~~~l~A~~~ll~-~~p~~~~--~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~g~~~~~pv~ 414 (863)
++++.+----|.+..+|-|+..+.. +...-++ ..+|| -.|+ +|+..++++.+.++-...+ ..-+.
T Consensus 131 ~v~iA~TGSGKTLay~lP~i~~l~~~~~~~~~~~~P~vLV--L~PT-------RELA~QV~~~~~~~~~~~~---~~~~c 198 (519)
T KOG0331|consen 131 LVGIARTGSGKTLAYLLPAIVHLNNEQGKLSRGDGPIVLV--LAPT-------RELAVQVQAEAREFGKSLR---LRSTC 198 (519)
T ss_pred eEEEeccCCcchhhhhhHHHHHHHhccccccCCCCCeEEE--EcCc-------HHHHHHHHHHHHHHcCCCC---ccEEE
Confidence 6789999999999999999999987 3444344 34554 4566 4788888877777644433 22233
Q ss_pred EEcCCCCHHHHHHHHHhccceeeccc
Q 002955 415 LIDTPLQFYERIAYYVIAECCLVTAV 440 (863)
Q Consensus 415 ~~~~~v~~~el~aly~~ADv~vvtS~ 440 (863)
+..|.--..++..+-+.+||+|-|+-
T Consensus 199 vyGG~~~~~Q~~~l~~gvdiviaTPG 224 (519)
T KOG0331|consen 199 VYGGAPKGPQLRDLERGVDVVIATPG 224 (519)
T ss_pred EeCCCCccHHHHHHhcCCcEEEeCCh
Confidence 34444455789999999999999984
No 391
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=20.80 E-value=1e+03 Score=27.57 Aligned_cols=33 Identities=12% Similarity=0.188 Sum_probs=22.6
Q ss_pred CCCHHHHHHHHHhccceeecccccCCCccceeee
Q 002955 419 PLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYI 452 (863)
Q Consensus 419 ~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~ 452 (863)
.++.+|+..++..|||++ +|....-..+..|.+
T Consensus 226 ~~~l~el~~~l~~~DvVi-ssTsa~~~ii~~~~v 258 (414)
T COG0373 226 AVALEELLEALAEADVVI-SSTSAPHPIITREMV 258 (414)
T ss_pred eecHHHHHHhhhhCCEEE-EecCCCccccCHHHH
Confidence 456889999999999955 444455555544443
No 392
>TIGR00007 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase. Examples of this enzyme in Actinobacteria have been found to be bifunctional, also possessing phosphoribosylanthranilate isomerase activity ; the trusted cutoff here has now been raised to 275.0 to exclude the bifunctional group, now represented by model TIGR01919. HisA from Lactococcus lactis was reported to be inactive (MEDLINE:93322317).
Probab=20.49 E-value=2.1e+02 Score=29.73 Aligned_cols=63 Identities=11% Similarity=0.096 Sum_probs=42.7
Q ss_pred CCHHHHHHHHHhcc-cceeEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEcC-CChhhHHHHhh
Q 002955 578 LSIDHIVSAYKRTK-NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSG-KDRDTLAEWFS 648 (863)
Q Consensus 578 l~~~~i~~~y~~s~-~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TG-R~~~~l~~~~~ 648 (863)
.+...+++.|+... ..+.++|+||++.. .....+.++.+.+. -+.++.+-=| |+.+.++.++.
T Consensus 28 ~dp~~~a~~~~~~g~~~l~v~dl~~~~~g-----~~~~~~~i~~i~~~---~~~pi~~ggGI~~~ed~~~~~~ 92 (230)
T TIGR00007 28 DDPVEAAKKWEEEGAERIHVVDLDGAKEG-----GPVNLPVIKKIVRE---TGVPVQVGGGIRSLEDVEKLLD 92 (230)
T ss_pred CCHHHHHHHHHHcCCCEEEEEeCCccccC-----CCCcHHHHHHHHHh---cCCCEEEeCCcCCHHHHHHHHH
Confidence 46788999997764 46889999999865 12234444444443 3566777555 77788888874
Done!