Query 002957
Match_columns 863
No_of_seqs 147 out of 199
Neff 3.9
Searched_HMMs 29240
Date Mon Mar 25 07:59:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002957.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002957hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ypd_A Probable JMJC domain-co 100.0 1E-130 5E-135 1060.8 16.7 352 425-848 16-370 (392)
2 4gjz_A Lysine-specific demethy 99.2 7.7E-12 2.6E-16 122.9 4.9 35 767-801 198-232 (235)
3 3k2o_A Bifunctional arginine d 99.1 1.9E-10 6.6E-15 123.9 12.6 53 766-818 252-304 (336)
4 3kv5_D JMJC domain-containing 99.0 1.2E-09 4.1E-14 123.1 14.2 51 767-817 333-383 (488)
5 3al5_A HTYW5, JMJC domain-cont 98.9 1E-09 3.5E-14 117.4 6.3 42 767-808 237-278 (338)
6 2yu1_A JMJC domain-containing 98.8 2E-08 6.8E-13 112.3 14.3 53 765-817 261-313 (451)
7 3k3o_A PHF8, PHD finger protei 98.8 2.4E-08 8.1E-13 109.3 14.4 52 766-817 213-264 (371)
8 3kv4_A PHD finger protein 8; e 98.8 1.5E-08 5.3E-13 113.1 10.5 78 767-850 298-379 (447)
9 3d8c_A Hypoxia-inducible facto 98.8 2.5E-09 8.5E-14 115.2 3.5 40 766-805 257-297 (349)
10 3kv9_A JMJC domain-containing 98.7 6.3E-08 2.2E-12 106.8 13.4 52 766-817 241-292 (397)
11 3pua_A GRC5, PHD finger protei 98.6 1.7E-07 6E-12 103.2 12.7 79 766-850 240-322 (392)
12 3pur_A Lysine-specific demethy 97.5 7.1E-05 2.4E-09 85.2 5.1 51 767-817 363-413 (528)
13 2xxz_A Lysine-specific demethy 97.3 0.0003 1E-08 76.3 6.5 87 704-809 232-318 (332)
14 3avr_A Lysine-specific demethy 97.1 0.00043 1.5E-08 79.0 6.7 89 704-811 291-379 (531)
15 4ask_A Lysine-specific demethy 96.6 0.0019 6.6E-08 73.2 5.9 88 704-810 266-353 (510)
16 3dxt_A JMJC domain-containing 96.0 0.0079 2.7E-07 65.8 6.7 94 707-811 210-303 (354)
17 3opt_A DNA damage-responsive t 95.1 0.03 1E-06 61.7 6.9 92 707-810 253-345 (373)
18 2ox0_A JMJC domain-containing 94.8 0.045 1.5E-06 60.5 7.5 95 706-811 227-321 (381)
19 1vrb_A Putative asparaginyl hy 93.0 0.068 2.3E-06 57.6 4.5 36 767-802 215-252 (342)
20 1yhf_A Hypothetical protein SP 92.0 0.074 2.5E-06 46.6 2.7 59 742-807 56-114 (115)
21 2opk_A Hypothetical protein; p 92.0 0.049 1.7E-06 49.0 1.5 24 772-795 75-98 (112)
22 2pfw_A Cupin 2, conserved barr 91.8 0.059 2E-06 47.3 1.8 58 742-807 50-107 (116)
23 3ht1_A REMF protein; cupin fol 91.6 0.1 3.5E-06 47.3 3.2 41 767-807 76-116 (145)
24 3fjs_A Uncharacterized protein 91.5 0.08 2.7E-06 47.6 2.4 42 765-807 69-110 (114)
25 2fc7_A ZZZ3 protein; structure 91.3 0.086 3E-06 46.6 2.3 36 256-291 19-59 (82)
26 2q30_A Uncharacterized protein 91.2 0.065 2.2E-06 46.2 1.4 39 766-806 69-108 (110)
27 3lag_A Uncharacterized protein 90.9 0.077 2.6E-06 47.1 1.6 24 772-795 61-84 (98)
28 3h8u_A Uncharacterized conserv 90.9 0.11 3.9E-06 46.2 2.7 37 770-806 79-115 (125)
29 1v70_A Probable antibiotics sy 90.7 0.11 3.8E-06 43.7 2.4 38 769-806 66-103 (105)
30 4e2g_A Cupin 2 conserved barre 90.3 0.23 7.8E-06 44.2 4.2 59 742-807 57-115 (126)
31 2ozj_A Cupin 2, conserved barr 90.0 0.11 3.9E-06 45.6 1.9 36 765-800 71-106 (114)
32 1tot_A CREB-binding protein; z 90.0 0.095 3.2E-06 42.7 1.3 33 258-291 6-39 (52)
33 2dip_A Zinc finger SWIM domain 90.0 0.097 3.3E-06 47.8 1.5 35 256-290 29-65 (98)
34 2b8m_A Hypothetical protein MJ 89.9 0.12 4.2E-06 45.6 2.0 36 773-808 69-106 (117)
35 1juh_A Quercetin 2,3-dioxygena 89.6 0.14 4.8E-06 55.0 2.6 40 771-811 292-332 (350)
36 3d82_A Cupin 2, conserved barr 89.5 0.17 6E-06 42.9 2.6 29 771-799 69-97 (102)
37 2xlg_A SLL1785 protein, CUCA; 89.5 0.22 7.6E-06 51.4 3.9 77 741-820 58-163 (239)
38 2gu9_A Tetracenomycin polyketi 89.0 0.22 7.7E-06 42.7 3.0 41 767-807 59-99 (113)
39 2fqp_A Hypothetical protein BP 89.0 0.24 8.1E-06 42.9 3.1 25 771-795 60-84 (97)
40 1o5u_A Novel thermotoga mariti 88.7 0.14 4.8E-06 46.0 1.5 31 769-799 67-97 (101)
41 3ibm_A Cupin 2, conserved barr 88.7 0.16 5.3E-06 49.1 2.0 61 741-807 71-132 (167)
42 3kgz_A Cupin 2 conserved barre 88.4 0.27 9.2E-06 47.2 3.4 41 767-807 79-119 (156)
43 2e5r_A Dystrobrevin alpha; ZZ 87.9 0.19 6.5E-06 42.4 1.7 33 259-291 12-46 (63)
44 3h7j_A Bacilysin biosynthesis 87.8 0.19 6.6E-06 50.8 2.0 60 742-807 162-221 (243)
45 2i45_A Hypothetical protein; n 86.5 0.34 1.2E-05 42.2 2.6 37 770-809 67-103 (107)
46 1y9q_A Transcriptional regulat 86.3 0.24 8.4E-06 47.6 1.7 43 765-808 139-181 (192)
47 2ozi_A Hypothetical protein RP 86.2 0.22 7.5E-06 44.5 1.2 23 773-795 62-84 (98)
48 1lr5_A Auxin binding protein 1 85.9 0.3 1E-05 46.1 2.0 25 770-794 88-112 (163)
49 3cew_A Uncharacterized cupin p 85.5 0.35 1.2E-05 43.3 2.2 29 766-794 62-90 (125)
50 2oa2_A BH2720 protein; 1017534 85.2 0.47 1.6E-05 44.2 3.0 25 771-795 89-113 (148)
51 3l2h_A Putative sugar phosphat 85.0 0.49 1.7E-05 44.4 3.1 41 767-807 83-124 (162)
52 4i4a_A Similar to unknown prot 84.9 0.81 2.8E-05 40.7 4.4 56 765-824 67-124 (128)
53 3jzv_A Uncharacterized protein 84.4 0.41 1.4E-05 46.5 2.3 30 766-795 87-116 (166)
54 1vj2_A Novel manganese-contain 84.3 0.43 1.5E-05 43.1 2.3 29 767-795 83-111 (126)
55 4axo_A EUTQ, ethanolamine util 83.8 0.51 1.7E-05 45.9 2.6 61 743-810 80-140 (151)
56 1x82_A Glucose-6-phosphate iso 82.7 0.64 2.2E-05 45.7 2.9 40 768-807 117-156 (190)
57 3lwc_A Uncharacterized protein 82.5 0.61 2.1E-05 42.7 2.6 37 769-807 76-113 (119)
58 2o8q_A Hypothetical protein; c 82.3 0.74 2.5E-05 41.5 3.0 61 742-808 59-120 (134)
59 3rns_A Cupin 2 conserved barre 81.8 0.52 1.8E-05 47.2 2.0 48 743-796 170-218 (227)
60 2bnm_A Epoxidase; oxidoreducta 81.4 0.66 2.3E-05 44.6 2.5 45 743-793 137-185 (198)
61 3bcw_A Uncharacterized protein 81.0 0.57 1.9E-05 43.5 1.8 30 772-801 89-118 (123)
62 1y3t_A Hypothetical protein YX 80.7 0.72 2.5E-05 47.8 2.6 51 765-816 252-302 (337)
63 3i7d_A Sugar phosphate isomera 79.3 1.1 3.9E-05 42.7 3.3 59 744-807 62-122 (163)
64 1fi2_A Oxalate oxidase, germin 78.9 1.3 4.5E-05 43.6 3.7 39 770-808 119-157 (201)
65 1qwr_A Mannose-6-phosphate iso 78.5 0.71 2.4E-05 49.4 1.8 17 774-790 162-178 (319)
66 2f4p_A Hypothetical protein TM 78.4 1.2 4.2E-05 41.6 3.1 35 772-806 89-123 (147)
67 4h7l_A Uncharacterized protein 77.9 0.39 1.3E-05 47.2 -0.4 47 741-792 60-108 (157)
68 1zx5_A Mannosephosphate isomer 77.6 0.78 2.7E-05 48.8 1.8 18 773-790 161-178 (300)
69 1o4t_A Putative oxalate decarb 76.4 1.2 3.9E-05 40.9 2.3 31 765-795 91-121 (133)
70 3rns_A Cupin 2 conserved barre 75.6 0.95 3.3E-05 45.4 1.7 56 740-801 51-106 (227)
71 2vqa_A SLL1358 protein, MNCA; 75.4 1 3.5E-05 47.5 1.9 55 771-826 279-333 (361)
72 1rc6_A Hypothetical protein YL 74.9 0.9 3.1E-05 46.3 1.3 47 744-795 197-243 (261)
73 1y3t_A Hypothetical protein YX 73.6 1.4 4.8E-05 45.5 2.4 49 765-814 80-128 (337)
74 2pyt_A Ethanolamine utilizatio 73.5 1.7 5.7E-05 40.7 2.6 35 767-801 90-124 (133)
75 3h7j_A Bacilysin biosynthesis 73.2 1.4 4.9E-05 44.4 2.3 48 742-795 50-98 (243)
76 2wfp_A Mannose-6-phosphate iso 72.8 1.2 4.2E-05 49.1 1.8 15 775-789 245-259 (394)
77 1sef_A Conserved hypothetical 72.2 1.3 4.5E-05 45.5 1.8 31 765-795 216-246 (274)
78 1juh_A Quercetin 2,3-dioxygena 72.0 1.3 4.6E-05 47.5 1.8 70 742-817 66-140 (350)
79 1pmi_A PMI, phosphomannose iso 70.7 1.4 5E-05 49.3 1.8 16 774-789 270-285 (440)
80 1j58_A YVRK protein; cupin, de 70.3 1.6 5.6E-05 46.6 2.0 27 769-795 300-326 (385)
81 4e2q_A Ureidoglycine aminohydr 70.2 1.5 5E-05 46.3 1.6 29 765-793 220-248 (266)
82 4diq_A Lysine-specific demethy 69.3 2.9 9.8E-05 47.7 3.8 42 765-806 223-266 (489)
83 2xdv_A MYC-induced nuclear ant 68.9 2.9 9.8E-05 46.9 3.6 31 764-794 193-223 (442)
84 2d40_A Z3393, putative gentisa 68.8 2.5 8.4E-05 45.7 3.0 40 767-806 136-175 (354)
85 2vpv_A Protein MIF2, MIF2P; nu 68.1 2.5 8.7E-05 41.6 2.7 29 767-795 125-153 (166)
86 1sq4_A GLXB, glyoxylate-induce 65.4 2.1 7.3E-05 44.5 1.6 31 765-795 103-133 (278)
87 1sfn_A Conserved hypothetical 64.5 2.3 8E-05 43.2 1.7 32 764-795 198-229 (246)
88 3nw4_A Gentisate 1,2-dioxygena 63.3 3.3 0.00011 45.5 2.7 28 767-794 139-166 (368)
89 3bu7_A Gentisate 1,2-dioxygena 63.3 3.2 0.00011 45.9 2.6 28 767-794 329-356 (394)
90 2vqa_A SLL1358 protein, MNCA; 62.4 2.4 8.1E-05 44.8 1.3 25 770-794 96-120 (361)
91 1dgw_A Canavalin; duplicated s 62.3 3.6 0.00012 40.0 2.5 27 769-795 82-108 (178)
92 2ct7_A Ring finger protein 31; 61.5 4.5 0.00016 35.3 2.7 39 250-288 16-59 (86)
93 1zrr_A E-2/E-2' protein; nicke 60.4 6.1 0.00021 39.2 3.8 37 771-807 123-159 (179)
94 1sfn_A Conserved hypothetical 59.3 3.1 0.00011 42.2 1.5 31 766-796 82-112 (246)
95 3es1_A Cupin 2, conserved barr 57.2 4.9 0.00017 39.7 2.4 35 771-806 119-153 (172)
96 2d5f_A Glycinin A3B4 subunit; 57.1 4.5 0.00016 46.0 2.5 33 774-806 117-149 (493)
97 1sq4_A GLXB, glyoxylate-induce 54.7 3.8 0.00013 42.6 1.3 31 765-795 225-255 (278)
98 4b29_A Dimethylsulfoniopropion 54.2 4.2 0.00014 41.9 1.5 44 743-794 149-195 (217)
99 2e9q_A 11S globulin subunit be 54.1 4.8 0.00016 45.4 2.0 35 774-808 131-165 (459)
100 1sef_A Conserved hypothetical 53.6 4.7 0.00016 41.5 1.7 31 765-795 97-127 (274)
101 1rc6_A Hypothetical protein YL 53.4 6 0.00021 40.2 2.5 30 766-795 95-124 (261)
102 4e2q_A Ureidoglycine aminohydr 53.1 4.3 0.00015 42.7 1.4 25 771-795 110-134 (266)
103 1vr3_A Acireductone dioxygenas 52.7 8.8 0.0003 38.7 3.5 37 771-807 128-164 (191)
104 2d40_A Z3393, putative gentisa 50.9 7.3 0.00025 42.0 2.7 27 767-793 303-329 (354)
105 3c3v_A Arachin ARAH3 isoform; 50.2 6.4 0.00022 45.1 2.3 34 775-808 131-164 (510)
106 2arc_A ARAC, arabinose operon 50.2 9.9 0.00034 34.4 3.2 30 765-794 51-80 (164)
107 3bu7_A Gentisate 1,2-dioxygena 48.1 8.2 0.00028 42.8 2.6 27 766-792 158-184 (394)
108 1fxz_A Glycinin G1; proglycini 47.9 7.3 0.00025 44.1 2.3 30 772-801 115-144 (476)
109 3cjx_A Protein of unknown func 45.8 9.7 0.00033 37.2 2.5 33 775-807 85-126 (165)
110 2cav_A Protein (canavalin); vi 44.2 8.5 0.00029 43.1 2.0 27 770-796 128-155 (445)
111 2y0o_A Probable D-lyxose ketol 43.1 9.8 0.00034 38.0 2.1 41 769-811 117-158 (175)
112 1v5n_A PDI-like hypothetical p 42.6 8.8 0.0003 34.1 1.5 31 258-288 47-77 (89)
113 3avr_A Lysine-specific demethy 42.0 18 0.00061 41.8 4.2 36 255-290 455-495 (531)
114 1fxz_A Glycinin G1; proglycini 41.1 12 0.00041 42.4 2.6 85 740-826 352-440 (476)
115 1uij_A Beta subunit of beta co 41.1 9.7 0.00033 42.2 1.8 46 743-793 65-114 (416)
116 1vq8_T 50S ribosomal protein L 38.5 9.4 0.00032 36.2 1.1 42 743-786 14-55 (120)
117 2yw8_A RUN and FYVE domain-con 37.2 19 0.00065 31.2 2.7 35 254-289 15-52 (82)
118 2ea7_A 7S globulin-1; beta bar 35.6 16 0.00055 40.7 2.5 26 769-794 102-127 (434)
119 3c3v_A Arachin ARAH3 isoform; 35.5 16 0.00055 41.8 2.5 102 703-806 351-453 (510)
120 3j21_U 50S ribosomal protein L 35.1 11 0.00039 35.6 1.0 40 744-785 18-57 (121)
121 1j58_A YVRK protein; cupin, de 33.9 20 0.0007 38.1 2.9 25 771-795 123-147 (385)
122 2o1q_A Putative acetyl/propion 33.2 16 0.00055 34.3 1.7 55 740-800 58-115 (145)
123 1x4u_A Zinc finger, FYVE domai 32.0 23 0.0008 30.7 2.4 35 254-288 10-46 (84)
124 1z2q_A LM5-1; membrane protein 31.9 25 0.00085 30.6 2.6 36 253-289 16-54 (84)
125 2jmo_A Parkin; IBR, E3 ligase, 30.6 33 0.0011 29.6 3.1 34 255-288 22-66 (80)
126 2vrw_B P95VAV, VAV1, proto-onc 30.0 26 0.00087 37.7 2.8 37 255-291 354-393 (406)
127 2d5f_A Glycinin A3B4 subunit; 29.7 14 0.00047 42.1 0.7 122 703-828 346-468 (493)
128 3zyq_A Hepatocyte growth facto 28.0 1.2E+02 0.0042 30.6 7.3 61 229-289 129-197 (226)
129 3nw4_A Gentisate 1,2-dioxygena 26.5 32 0.0011 37.8 2.9 31 768-798 315-345 (368)
130 3kgl_A Cruciferin; 11S SEED gl 26.2 26 0.00088 39.8 2.1 32 775-806 150-181 (466)
131 3qac_A 11S globulin SEED stora 25.0 32 0.0011 39.0 2.6 34 775-808 135-168 (465)
132 3j20_Y 30S ribosomal protein S 24.6 32 0.0011 27.8 1.8 25 257-281 18-46 (50)
133 1zbd_B Rabphilin-3A; G protein 24.0 36 0.0012 32.5 2.3 37 256-292 53-92 (134)
134 1joc_A EEA1, early endosomal a 20.8 38 0.0013 31.7 1.8 36 254-289 65-102 (125)
135 3ebr_A Uncharacterized RMLC-li 20.5 39 0.0013 32.6 1.9 34 773-806 81-123 (159)
136 1uij_A Beta subunit of beta co 20.4 46 0.0016 36.9 2.6 33 773-806 310-342 (416)
No 1
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.4e-130 Score=1060.84 Aligned_cols=352 Identities=32% Similarity=0.547 Sum_probs=271.9
Q ss_pred CCCCchhhHHHHHHHhhcCCCEEEEccccccCCCCCChhHHHHHHhhhcccccccccCceeEeecCCCceeecchhhhhc
Q 002957 425 TKIQEDEELFRFQKHWIKGEPVIVRNVLDKVTGLSWEPMVMWRALCENVDSEVSSKMSEVKAIDCLASCEVEISTRQFFK 504 (863)
Q Consensus 425 ~di~~~d~l~hFQ~HW~kGePVIVr~Vl~~~s~lsWeP~~mwra~~e~~~~~~~d~~~~vkaIDCld~~eVei~v~qFF~ 504 (863)
.|..+.+|++|||+||++|||||||||++++++++|+|++||++|++. .+++|||++|++++|++++||+
T Consensus 16 ~d~~~~~n~~~Fq~hW~~GePViVs~V~~~~~~~~W~Pe~~~~~~gd~----------~~~lidC~~~~~~~i~v~~Ff~ 85 (392)
T 2ypd_A 16 KDYKNSSNWKLFKECWKQGQPAVVSGVHKKMNISLWKAESISLDFGDH----------QADLLNCKDSIISNANVKEFWD 85 (392)
T ss_dssp CCTTCTTHHHHHHHHHTTTCCEEECCHHHHSCGGGGSHHHHHHHHTTS----------CCCCEETTTCCBCSCCHHHHHH
T ss_pred cCCCCcccHHHHHHHHhCCCcEEEechhhhCcCCccCHHHHHHHhcCc----------eeeeeeCCCCccccCcHHHHhh
Confidence 344556899999999999999999999999999999999999998642 3678999999999999999999
Q ss_pred cccCCc---cCCCCCcceeeccCCCCCCchhhhcccchHHHHhCCCccccCCCCCccccccccCCCCCCCCCCCcchhhc
Q 002957 505 GYTQGR---TYDNFWPEMLKLKDWPPSDKFEDLMPRHCDEFISALPFQEYSDPRAGILNLAVKLPSGVLKPDLGPKTYIA 581 (863)
Q Consensus 505 Gy~~gr---~~~ngwp~mLKLKDWPps~~Fee~LPrh~~EFi~aLP~pEYT~Pr~G~LNLAskLP~~~lkPDLGPK~YIA 581 (863)
||++++ ++++|||+|||||||||+++|+++||+||+|||++|||||||||+ |+||||++||+++++||||||||||
T Consensus 86 Gf~~~~~r~~~~~g~p~~LKLKDWPp~~~F~e~lP~~~~df~~~LPlpEYt~p~-G~LNLAs~LP~~~~kPDLGPK~YiA 164 (392)
T 2ypd_A 86 GFEEVSKRQKNKSGETVVLKLKDWPSGEDFKTMMPARYEDLLKSLPLPEYCNPE-GKFNLASHLPGFFVRPDLGPRLCSA 164 (392)
T ss_dssp TSSBGGGC------CCCCEEECSSSBTHHHHHHSHHHHHHHHHHCSSHHHHSTT-CTTCCTTTSCGGGCC---CCEEEEE
T ss_pred hccccccCCcCCCCCcceeeecCCCChHHHHHHhHHHHHHHHHcCCchHhhCCC-ccchHHHhCCCCCCCCCCCcchhhh
Confidence 999875 357999999999999999999999999999999999999999985 9999999999999999999999999
Q ss_pred cccccccCCCCCcccccccccchhhhhhcccccccchhhHHHHHHHHHHHHHhhhhhhhccCCCCccccCCCCCCCCCCC
Q 002957 582 YGVAEELGRGDSVTKLHCDMSDAVNILTHTEEVLLTEEQHSAVERLKKEHRAQDLKENLVQDGMDESIEEPNSDNNKEDT 661 (863)
Q Consensus 582 YG~~eelGrGDSVTkLHcDmSDAVNIL~HtaeV~~~~~q~~~I~kLk~k~~~q~~~e~~~~~~~~~~~~e~~~d~~~~d~ 661 (863)
||+++++|+|+|||||||||||||||||||+.++... ..... ...+++.+++..+.+
T Consensus 165 YG~~~~~~~~~gvT~LH~DmsDaVNiL~h~~~~~~~~-~~~~~-~~l~~~~~~~~d~~~--------------------- 221 (392)
T 2ypd_A 165 YGVVAAKDHDIGTTNLHIEVSDVVNILVYVGIAKGNG-ILSKA-GILKKFEEEDLDDIL--------------------- 221 (392)
T ss_dssp CCSTTTTCTTCCSEEEEECSSEEEEEEEEEECCBCTT-CCCHH-HHHHHHHTSCCCHHH---------------------
T ss_pred cCcchhcccCCCcceeeeehhhhhhhhheecccCccc-cchhh-hhhhhhhhccccHHH---------------------
Confidence 9999999999999999999999999999998654222 11111 111222111110000
Q ss_pred ccccccccCCCCCCcccccccccccccCCccccCCCCCCcCCCCceEEEeecCCChhHHHHHHHHHHHhhccccCCCCCc
Q 002957 662 DVSEINDSELLPSGIRGEFKMSRDEMQGTAFTCPHSEGTMVESGGALWDIFRRQDVPKLEAYLRKHFKEFRHVYCSPVEQ 741 (863)
Q Consensus 662 ~~~~~~~~e~~~s~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~GALWDIFRreDvpKLreYL~kh~~EFrh~~~~pv~~ 741 (863)
+ .++. +..+.+||+||||||||++|||+||++|++|| |.++.+
T Consensus 222 ---~--------------~r~~----------------~~~~~~GAlW~Ifr~~D~~klr~~L~~~~~e~----~~~~~~ 264 (392)
T 2ypd_A 222 ---R--------------KRLK----------------DSSEIPGALWHIYAGKDVDKIREFLQKISKEQ----GLEVLP 264 (392)
T ss_dssp ---H--------------HHHT----------------CTTCCEEEEEEEECGGGHHHHHHHHHHHHHHH----C-----
T ss_pred ---h--------------hhcc----------------CCCCCCCceeeeeCHhhHHHHHHHHHHHHHhh----CCCccC
Confidence 0 0000 01357899999999999999999999999998 356788
Q ss_pred ccCCcccCccccCHHHHHHHHHHhCccceEEEeecCceEEecCCCccccccccccceeeccccCcccHHHHHHHHHHhhc
Q 002957 742 VIHPIHDQCFYLSSEHKKKLKEEFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVDECLRLTKEFRL 821 (863)
Q Consensus 742 v~dPIHDQsfYLd~ehk~rLkEEyGVEpWTF~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~eC~rLTeEfR~ 821 (863)
+.||||||+||||.+||++|+|||||+||||+|++|||||||||||||||||+||||||+||||||||++|++||+|||+
T Consensus 265 ~~dPihdq~~yL~~~~r~~L~ee~gv~~~~~~Q~~GeavfiPaG~~HQV~Nl~~~i~va~df~spe~~~~c~~lt~E~R~ 344 (392)
T 2ypd_A 265 EHDPIRDQSWYVNKKLRQRLLEEYGVRTCTLIQFLGDAIVLPAGALHQVQNFHSCIQVTEDFVSPEHLVESFHLTQELRL 344 (392)
T ss_dssp -CCHHHHTCCCCCHHHHHHHHHHHCCCCEEEEEETTCEEEECTTCEEEEEESSEEEEEEEEECCGGGHHHHHHHHHHC--
T ss_pred CCCcCcCCCEEecHHHHHHHHHhcCCeeEEEEEcCCCEEEecCCCHHHHhcccchhhHhhhhcChhhHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChhhhcccchhcccceehhhhhhhhh
Q 002957 822 LPKNHRAREDKLEVYLVFIKRKCYVHE 848 (863)
Q Consensus 822 LP~~H~akEDKLEVKkm~lh~~~~~~e 848 (863)
|| +|++||||||||||+||++..+..
T Consensus 345 l~-~~~~~edkLqvk~m~~~av~~av~ 370 (392)
T 2ypd_A 345 LK-EEINYDDKLQVKNILYHAVKEMVR 370 (392)
T ss_dssp ---------------------------
T ss_pred cc-hhhhhHHHHHHHHHHHHHHHHHHH
Confidence 96 699999999999999999655543
No 2
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=99.20 E-value=7.7e-12 Score=122.92 Aligned_cols=35 Identities=29% Similarity=0.284 Sum_probs=32.1
Q ss_pred ccceEEEeecCceEEecCCCccccccccccceeec
Q 002957 767 VEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAV 801 (863)
Q Consensus 767 VEpWTF~Q~lGEAVFIPAGCPHQVRNLkSCIKVAl 801 (863)
+.++.++|.+||++|||+|..|||+||..||.|..
T Consensus 198 ~~~~~~~l~pGD~LyiP~gW~H~V~~l~~sisvn~ 232 (235)
T 4gjz_A 198 APFLSCILSPGEILFIPVKYWHYVRALDLSFSVSF 232 (235)
T ss_dssp CCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEE
T ss_pred CCcEEEEECCCCEEEeCCCCcEEEEECCCEEEEEE
Confidence 57899999999999999999999999999987753
No 3
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=99.14 E-value=1.9e-10 Score=123.92 Aligned_cols=53 Identities=32% Similarity=0.444 Sum_probs=50.4
Q ss_pred CccceEEEeecCceEEecCCCccccccccccceeeccccCcccHHHHHHHHHH
Q 002957 766 GVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVDECLRLTKE 818 (863)
Q Consensus 766 GVEpWTF~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~eC~rLTeE 818 (863)
+..++.++|.+||++|||+|..|||+||..||.|+..|++|.|+...+++|-+
T Consensus 252 ~~~~~~~~l~pGd~l~iP~gw~H~v~~~~~sisv~~~f~~~~nl~~~~~~~~~ 304 (336)
T 3k2o_A 252 EFKPLEILQKPGETVFVPGGWWHVVLNLDTTIAITQNFASSTNFPVVWHKTVR 304 (336)
T ss_dssp GGCCEEEEECTTCEEEECTTCEEEEEESSCEEEEEEEECCTTTHHHHHHHHHH
T ss_pred cCceEEEEECCCCEEEeCCCCcEEEecCCCeEEEEcccCCcccHHHHHHHHHh
Confidence 46889999999999999999999999999999999999999999999999964
No 4
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=99.04 E-value=1.2e-09 Score=123.07 Aligned_cols=51 Identities=24% Similarity=0.386 Sum_probs=48.4
Q ss_pred ccceEEEeecCceEEecCCCccccccccccceeeccccCcccHHHHHHHHH
Q 002957 767 VEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVDECLRLTK 817 (863)
Q Consensus 767 VEpWTF~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~eC~rLTe 817 (863)
.+++.++|.+||++|||+|..|||.||..||-|...|++..|+...++..+
T Consensus 333 ~~~~~~~l~pGe~lfIPsGWwH~V~nledsIai~~NF~~~~nl~~~l~~~~ 383 (488)
T 3kv5_D 333 DKCYKCVVKQGHTLFVPTGWIHAVLTSQDCMAFGGNFLHNLNIGMQLRCYE 383 (488)
T ss_dssp SCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCSTTHHHHHHHHH
T ss_pred cceEEEeeCCCCEEEeCCCceEEeeCCCCeEEEccccCCccCHHHHHHHHH
Confidence 589999999999999999999999999999999999999999999888654
No 5
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=98.90 E-value=1e-09 Score=117.44 Aligned_cols=42 Identities=19% Similarity=0.216 Sum_probs=39.4
Q ss_pred ccceEEEeecCceEEecCCCccccccccccceeeccccCccc
Q 002957 767 VEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPEN 808 (863)
Q Consensus 767 VEpWTF~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEn 808 (863)
+.++.+++.+||++|||+|..|||+||..||.|..-|.+|..
T Consensus 237 ~~~~~~~L~pGD~LyiP~gWwH~v~~l~~sisvn~~~~~~~~ 278 (338)
T 3al5_A 237 ARRYECSLEAGDVLFIPALWFHNVISEEFGVGVNIFWKHLPS 278 (338)
T ss_dssp CCEEEEEECTTCEEEECTTCEEEEEESSCEEEEEEEECSSCG
T ss_pred CCCEEEEECCCCEEEECCCCeEEEeeCCCEEEEEEEecCCcc
Confidence 579999999999999999999999999999999999988764
No 6
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=98.84 E-value=2e-08 Score=112.32 Aligned_cols=53 Identities=21% Similarity=0.201 Sum_probs=49.3
Q ss_pred hCccceEEEeecCceEEecCCCccccccccccceeeccccCcccHHHHHHHHH
Q 002957 765 FGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVDECLRLTK 817 (863)
Q Consensus 765 yGVEpWTF~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~eC~rLTe 817 (863)
+.-+++.++|..||++|||+|.-|||.||..||-|+..|++.-|+...+++++
T Consensus 261 ~~~~~~~v~l~pGE~LfIPsGWwH~V~nledsIait~NF~~~~nl~~~l~~~~ 313 (451)
T 2yu1_A 261 RVSDCQRIELKQGYTFVIPSGWIHAVYTPTDTLVFGGNFLHSFNIPMQLKIYN 313 (451)
T ss_dssp HSSCCEEEEECTTCEEEECTTCEEEEECSSCEEEEEEEECCSSSHHHHHHHHH
T ss_pred ccccceEEEECCCcEEEeCCCceEEEecCCCeEEEeeeeCCcccHHHHHHHHH
Confidence 34578999999999999999999999999999999999999999999888875
No 7
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=98.84 E-value=2.4e-08 Score=109.30 Aligned_cols=52 Identities=23% Similarity=0.373 Sum_probs=49.7
Q ss_pred CccceEEEeecCceEEecCCCccccccccccceeeccccCcccHHHHHHHHH
Q 002957 766 GVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVDECLRLTK 817 (863)
Q Consensus 766 GVEpWTF~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~eC~rLTe 817 (863)
..+++.++|.+||++|||+|..|||.||..||-|+..|++..|+...++..+
T Consensus 213 ~~~~~ev~l~pGEtLfIPsGWwH~V~nledSIai~~NFl~~~nl~~~l~~~~ 264 (371)
T 3k3o_A 213 VDKCYKCSVKQGQTLFIPTGWIHAVLTPVDCLAFGGNFLHSLNIEMQLKAYE 264 (371)
T ss_dssp SSCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCSTTHHHHHHHHH
T ss_pred cCceEEEEECCCcEEEeCCCCeEEEecCCCeEEECCcccchhhHHHHHHHHH
Confidence 3689999999999999999999999999999999999999999999999877
No 8
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=98.77 E-value=1.5e-08 Score=113.09 Aligned_cols=78 Identities=22% Similarity=0.277 Sum_probs=61.9
Q ss_pred ccceEEEeecCceEEecCCCccccccccccceeeccccCcccHHHHHHHHH-HhhcCChhhhcccchhcc---cceehhh
Q 002957 767 VEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVDECLRLTK-EFRLLPKNHRAREDKLEV---YLVFIKR 842 (863)
Q Consensus 767 VEpWTF~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~eC~rLTe-EfR~LP~~H~akEDKLEV---Kkm~lh~ 842 (863)
.+++.++|..||++|||+|..|||.||..||-|+..|++..|+..-++..+ |-|.- -.+|... .+|++|.
T Consensus 298 ~~~~~v~l~pGetlfIPsGWwH~V~nledsIai~~NF~~~~nl~~~l~~~~~E~~~~------~~~~~~~p~f~~~~w~~ 371 (447)
T 3kv4_A 298 DKCYKCSVKQGQTLFIPTGWIHAVLTPVDCLAFGGNFLHSLNIEMQLKAYEIEKRLS------TADLFRFPNFETICWYV 371 (447)
T ss_dssp SCCEEEEEETTCEEEECTTCEEEEEESSCEEEEEEEECCSTTHHHHHHHHHHHHHTT------CCGGGSCTTHHHHHHHH
T ss_pred cceEEEEECCCcEEecCCCCeEEEecCCCEEEEccccccccCHHHHHHHHHHHHhcC------CCccccccCHHHHHHHH
Confidence 589999999999999999999999999999999999999999999999887 43321 1233333 5566666
Q ss_pred hhhhhhhh
Q 002957 843 KCYVHEIS 850 (863)
Q Consensus 843 ~~~~~e~~ 850 (863)
+-.+++.+
T Consensus 372 ~~~~~~~~ 379 (447)
T 3kv4_A 372 GKHILDIF 379 (447)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66655544
No 9
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=98.76 E-value=2.5e-09 Score=115.16 Aligned_cols=40 Identities=20% Similarity=0.299 Sum_probs=36.2
Q ss_pred CccceEEEeecCceEEecCCCcccccccc-ccceeeccccC
Q 002957 766 GVEPWTFEQKLGEAVFIPAGCPHQVRNLK-SCTKVAVDFVS 805 (863)
Q Consensus 766 GVEpWTF~Q~lGEAVFIPAGCPHQVRNLk-SCIKVAlDFVS 805 (863)
.+.++.+++.+||++|||+|..|||+||. .++.|++.|..
T Consensus 257 ~~~~~~~~l~pGD~LyiP~gWwH~V~~l~d~~~sisvn~w~ 297 (349)
T 3d8c_A 257 NVVGYETVVGPGDVLYIPMYWWHHIESLLNGGITITVNFWY 297 (349)
T ss_dssp GCCEEEEEECTTCEEEECTTCEEEEEECTTSCCEEEEEEEE
T ss_pred cCCcEEEEECCCCEEEECCCCcEEEEEcCCCCcEEEEEEEc
Confidence 35799999999999999999999999998 58888888865
No 10
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=98.73 E-value=6.3e-08 Score=106.77 Aligned_cols=52 Identities=23% Similarity=0.358 Sum_probs=48.4
Q ss_pred CccceEEEeecCceEEecCCCccccccccccceeeccccCcccHHHHHHHHH
Q 002957 766 GVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVDECLRLTK 817 (863)
Q Consensus 766 GVEpWTF~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~eC~rLTe 817 (863)
..+++.++|.+||++|||+|..|||.||..||-|...|+++.|+...++..+
T Consensus 241 ~~~~~~v~l~pGe~lfIPsGW~H~V~nledSIai~~NFl~~~nl~~~l~~~~ 292 (397)
T 3kv9_A 241 VDKCYKCVVKQGHTLFVPTGWIHAVLTSQDCMAFGGNFLHNLNIGMQLRCYE 292 (397)
T ss_dssp SSCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCSTTHHHHHHHHH
T ss_pred cCceEEEEECCCCEEEeCCCCeEEccCCcCeEEECCcccCchhHHHHHHHHH
Confidence 3589999999999999999999999999999999999999999998887654
No 11
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=98.62 E-value=1.7e-07 Score=103.16 Aligned_cols=79 Identities=19% Similarity=0.123 Sum_probs=61.2
Q ss_pred CccceEEEeecCceEEecCCCccccccccccceeeccccCcccHHHHHHHHH-HhhcCChhhhcccchhc---ccceehh
Q 002957 766 GVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVDECLRLTK-EFRLLPKNHRAREDKLE---VYLVFIK 841 (863)
Q Consensus 766 GVEpWTF~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~eC~rLTe-EfR~LP~~H~akEDKLE---VKkm~lh 841 (863)
..+++.++|..||++|||+|..|||.|+..||-|...||+..|+..-++..+ |-|.= -.+|.. ..+|++|
T Consensus 240 ~~~~~ev~l~pGEtlfIPsGWwH~V~nledSIai~gNFl~~~nl~~~l~~~~~E~~~~------~~~~f~fp~F~~~~wy 313 (392)
T 3pua_A 240 VDKCYKCIVKQGQTLFIPSGWIYATLTPVDCLAFAGHFLHSLSVEMQMRAYEVERRLK------LGSLTQFPNFETACWY 313 (392)
T ss_dssp SSCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCTTCHHHHHHHHHHHHHHT------CCCSSCCTTHHHHHHH
T ss_pred ccceEEEEECCCcEEeeCCCceEEEecCCCEEEEcCcccChhhHHHHHHHHHHHHHhC------CCccCcCCChHHHHHH
Confidence 3689999999999999999999999999999999999999999999988887 53321 112222 3455666
Q ss_pred hhhhhhhhh
Q 002957 842 RKCYVHEIS 850 (863)
Q Consensus 842 ~~~~~~e~~ 850 (863)
.+-..++.+
T Consensus 314 ~~~~~l~~~ 322 (392)
T 3pua_A 314 MGKHLLEAF 322 (392)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 655555543
No 12
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=97.47 E-value=7.1e-05 Score=85.21 Aligned_cols=51 Identities=22% Similarity=0.234 Sum_probs=46.9
Q ss_pred ccceEEEeecCceEEecCCCccccccccccceeeccccCcccHHHHHHHHH
Q 002957 767 VEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVDECLRLTK 817 (863)
Q Consensus 767 VEpWTF~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~eC~rLTe 817 (863)
.....++|..||++|||+|..|+|.|+..||-|...|++..||..-+++++
T Consensus 363 ~~~~~v~l~pGEtlfIPsGW~HaV~tleDSIaiggNFl~~~nl~~qlri~~ 413 (528)
T 3pur_A 363 GAVKRVVIKEGQTLLIPAGWIHAVLTPVDSLVFGGNFLHLGNLEMQMRVYH 413 (528)
T ss_dssp TCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCGGGHHHHHHHHH
T ss_pred ccEEEEEECCCCEEEecCCceEEEecCCCeEEEcCcccchhhHHHHHHHHH
Confidence 345689999999999999999999999999999999999999999888664
No 13
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=97.25 E-value=0.0003 Score=76.26 Aligned_cols=87 Identities=18% Similarity=0.272 Sum_probs=71.5
Q ss_pred CCceEEEeecCCChhHHHHHHHHHHHhhccccCCCCCcccCCcccCccccCHHHHHHHHHHhCccceEEEeecCceEEec
Q 002957 704 SGGALWDIFRRQDVPKLEAYLRKHFKEFRHVYCSPVEQVIHPIHDQCFYLSSEHKKKLKEEFGVEPWTFEQKLGEAVFIP 783 (863)
Q Consensus 704 ~~GALWDIFRreDvpKLreYL~kh~~EFrh~~~~pv~~v~dPIHDQsfYLd~ehk~rLkEEyGVEpWTF~Q~lGEAVFIP 783 (863)
.+--+|=.-..+.+.+++++++++.. |. |.+.++++.+- |+ +.||.=+.|+|++||.|+|+
T Consensus 232 p~~~~Wy~VP~e~~~~~e~l~~k~~~--------------d~-~~~~~~~~p~~---L~-~~gIPvyr~~QkpGd~Vi~~ 292 (332)
T 2xxz_A 232 PGDCEWFAVHEHYWETISAFCDRHGV--------------DY-LTGSWWPILDD---LY-ASNIPVYRFVQRPGDLVWIN 292 (332)
T ss_dssp ESCEEEEEECGGGHHHHHHHHHHTTC--------------CT-TTSCBCCCHHH---HH-HTTCCCEEEEECTTCEEEEC
T ss_pred CCceEEEEECHHHHHHHHHHHHhcCC--------------ch-hhceecCCHHH---HH-hCCCCeEEEEECCCCEEEEC
Confidence 34568999999999999999986321 22 34567776643 33 35999999999999999999
Q ss_pred CCCccccccccccceeeccccCcccH
Q 002957 784 AGCPHQVRNLKSCTKVAVDFVSPENV 809 (863)
Q Consensus 784 AGCPHQVRNLkSCIKVAlDFVSPEnV 809 (863)
+||-|||.|.=-|+++|.-|..|...
T Consensus 293 PgayH~v~n~G~~~n~awN~a~~~~~ 318 (332)
T 2xxz_A 293 AGTVHWVQATGWCNNIAWNVGPLTAY 318 (332)
T ss_dssp TTCEEEEEESSSEEEEEEEEESCTTG
T ss_pred CCceEEEEecceeeEEEEEeCCCcHH
Confidence 99999999999999999999999765
No 14
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=97.15 E-value=0.00043 Score=79.05 Aligned_cols=89 Identities=21% Similarity=0.293 Sum_probs=73.5
Q ss_pred CCceEEEeecCCChhHHHHHHHHHHHhhccccCCCCCcccCCcccCccccCHHHHHHHHHHhCccceEEEeecCceEEec
Q 002957 704 SGGALWDIFRRQDVPKLEAYLRKHFKEFRHVYCSPVEQVIHPIHDQCFYLSSEHKKKLKEEFGVEPWTFEQKLGEAVFIP 783 (863)
Q Consensus 704 ~~GALWDIFRreDvpKLreYL~kh~~EFrh~~~~pv~~v~dPIHDQsfYLd~ehk~rLkEEyGVEpWTF~Q~lGEAVFIP 783 (863)
.+-.+|=.=..++..|++++++++. .|. |...|+++.+. |+ +.||.-+.|+|++||.|+++
T Consensus 291 gg~~~Wy~VP~e~~~k~e~l~~k~~--------------~~~-~~~~~~~~p~~---L~-~~gIPvyr~vQkpGd~Vi~~ 351 (531)
T 3avr_A 291 PGDCEWFVVPEGYWGVLNDFCEKNN--------------LNF-LMGSWWPNLED---LY-EANVPVYRFIQRPGDLVWIN 351 (531)
T ss_dssp ESCEEEEEECGGGHHHHHHHHHHTT--------------CCT-TTSCBCCCHHH---HH-HTTCCCEEEEECTTCEEEEC
T ss_pred CCCeEEEEeCHHHHHHHHHHHHHcC--------------CCh-hhceeecCHHH---HH-hCCCCeEEEEECCCCEEEEC
Confidence 3456899999999999999998651 233 34567776553 33 35999999999999999999
Q ss_pred CCCccccccccccceeeccccCcccHHH
Q 002957 784 AGCPHQVRNLKSCTKVAVDFVSPENVDE 811 (863)
Q Consensus 784 AGCPHQVRNLkSCIKVAlDFVSPEnV~e 811 (863)
+||.|||.|+=-|+++|.-|..|.-..-
T Consensus 352 PgayH~v~n~G~~~n~awN~a~~~~~q~ 379 (531)
T 3avr_A 352 AGTVHWVQAIGWCNNIAWNVGPLTACQY 379 (531)
T ss_dssp TTCEEEEEESSSEEEEEEEECCSSHHHH
T ss_pred CCceEEEEecceeeeeEEEeccCchHHH
Confidence 9999999999999999999999996653
No 15
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=96.58 E-value=0.0019 Score=73.24 Aligned_cols=88 Identities=18% Similarity=0.272 Sum_probs=71.7
Q ss_pred CCceEEEeecCCChhHHHHHHHHHHHhhccccCCCCCcccCCcccCccccCHHHHHHHHHHhCccceEEEeecCceEEec
Q 002957 704 SGGALWDIFRRQDVPKLEAYLRKHFKEFRHVYCSPVEQVIHPIHDQCFYLSSEHKKKLKEEFGVEPWTFEQKLGEAVFIP 783 (863)
Q Consensus 704 ~~GALWDIFRreDvpKLreYL~kh~~EFrh~~~~pv~~v~dPIHDQsfYLd~ehk~rLkEEyGVEpWTF~Q~lGEAVFIP 783 (863)
.+--+|=.=..+...+++++++++.. |. +.+.|+.+.+. |+ +.||.=+.|+|++||.|+++
T Consensus 266 gg~c~WY~VP~e~~~k~e~l~~k~~~--------------d~-l~~~~~pspe~---L~-kagIPvyr~iQkPGdfVit~ 326 (510)
T 4ask_A 266 PGDCEWFAVHEHYWETISAFCDRHGV--------------DY-LTGSWWPILDD---LY-ASNIPVYRFVQRPGDLVWIN 326 (510)
T ss_dssp ESCEEEEEECGGGHHHHHHHHHHTTC--------------CT-TTSCBCCCHHH---HH-HTTCCCEEEEECTTCEEEEC
T ss_pred CCceeEEEECHHHHHHHHHHHHHhCc--------------ch-hhccccCCHHH---HH-hCCCCeEEEEECCCCEEEEC
Confidence 34569999999999999999886421 22 33667776653 33 47999999999999999999
Q ss_pred CCCccccccccccceeeccccCcccHH
Q 002957 784 AGCPHQVRNLKSCTKVAVDFVSPENVD 810 (863)
Q Consensus 784 AGCPHQVRNLkSCIKVAlDFVSPEnV~ 810 (863)
+||.|+|+|.==|+++|--|.-|-...
T Consensus 327 PgtyH~Vqs~Gf~~niaWNvap~t~~q 353 (510)
T 4ask_A 327 AGTVHWVQATGWCNNIAWNVGPLTAYQ 353 (510)
T ss_dssp TTCEEEEEESSSEEEEEEEECBSSHHH
T ss_pred CCceEEEEecCeeeeeEEEecCCCHHH
Confidence 999999999999999999998886443
No 16
>3dxt_A JMJC domain-containing histone demethylation PROT; JMJD2D, histone demethylase, H3K9, jumonji domain-CONT protein 2D, oxidoreductase; 1.80A {Homo sapiens} PDB: 3dxu_A* 4hon_A* 4hoo_A 2w2i_A*
Probab=96.02 E-value=0.0079 Score=65.82 Aligned_cols=94 Identities=21% Similarity=0.215 Sum_probs=79.0
Q ss_pred eEEEeecCCChhHHHHHHHHHHHhhccccCCCCCcccCCcccCccccCHHHHHHHHHHhCccceEEEeecCceEEecCCC
Q 002957 707 ALWDIFRRQDVPKLEAYLRKHFKEFRHVYCSPVEQVIHPIHDQCFYLSSEHKKKLKEEFGVEPWTFEQKLGEAVFIPAGC 786 (863)
Q Consensus 707 ALWDIFRreDvpKLreYL~kh~~EFrh~~~~pv~~v~dPIHDQsfYLd~ehk~rLkEEyGVEpWTF~Q~lGEAVFIPAGC 786 (863)
-+|=.-.+++..|+++++++.+.+.- ..|. +=+|.+.+.++++. |+ +.||.-.+++|++||.|++-.|+
T Consensus 210 K~WY~VP~~~~~kfE~l~k~~~p~~~-~~c~------~fL~h~~~lisP~~---L~-~~GIpv~~~vQ~pGEfViTfP~a 278 (354)
T 3dxt_A 210 KTWYVVPPEHGQRLERLARELFPGSS-RGCG------AFLRHKVALISPTV---LK-ENGIPFNRITQEAGEFMVTFPYG 278 (354)
T ss_dssp EEEEEECGGGHHHHHHHHHHHSHHHH-HHCT------TGGGGCCEEECHHH---HH-HTTCCCEEEEECTTCEEEECTTC
T ss_pred eEEEEeCHHHHHHHHHHHHHhCchhh-hhcH------HHHhcCcccCCHHH---HH-HCCCceEEEEeCCCcEEEECCCc
Confidence 49999999999999999998865421 1232 22566788899873 44 47999999999999999999999
Q ss_pred ccccccccccceeeccccCcccHHH
Q 002957 787 PHQVRNLKSCTKVAVDFVSPENVDE 811 (863)
Q Consensus 787 PHQVRNLkSCIKVAlDFVSPEnV~e 811 (863)
=|.|.|+--|+..|..|..|.=+..
T Consensus 279 YH~gfn~Gfn~aEAvNFA~~~Wl~~ 303 (354)
T 3dxt_A 279 YHAGFNHGFNCAEAINFATPRWIDY 303 (354)
T ss_dssp EEEEEESSSEEEEEEEECCGGGHHH
T ss_pred eEEEeeccccHhHhhccCcHHHHHh
Confidence 9999999999999999999998764
No 17
>3opt_A DNA damage-responsive transcriptional repressor R; RPH1, histone demethylase, catalytic core, oxidoreductase; HET: DNA AKG; 2.20A {Saccharomyces cerevisiae} PDB: 3opw_A*
Probab=95.07 E-value=0.03 Score=61.71 Aligned_cols=92 Identities=20% Similarity=0.239 Sum_probs=74.8
Q ss_pred eEEEeecCCChhHHHHHHHHHHHh-hccccCCCCCcccCCcccCccccCHHHHHHHHHHhCccceEEEeecCceEEecCC
Q 002957 707 ALWDIFRRQDVPKLEAYLRKHFKE-FRHVYCSPVEQVIHPIHDQCFYLSSEHKKKLKEEFGVEPWTFEQKLGEAVFIPAG 785 (863)
Q Consensus 707 ALWDIFRreDvpKLreYL~kh~~E-Frh~~~~pv~~v~dPIHDQsfYLd~ehk~rLkEEyGVEpWTF~Q~lGEAVFIPAG 785 (863)
-+|=.-..+++.|+++++++++-+ |. .|. +=+|...+.+++. .|+ +.||.-.+++|++||.|++=.|
T Consensus 253 K~WY~VP~~~~~kfE~l~k~~~p~~~~--~c~------~fL~h~~~lisP~---~L~-~~GIpv~r~vQ~pGEfViTfP~ 320 (373)
T 3opt_A 253 KQWYSIPQEDRFKFYKFMQEQFPEEAK--NCP------EFLRHKMFLASPK---LLQ-ENGIRCNEIVHHEGEFMITYPY 320 (373)
T ss_dssp EEEEECCGGGHHHHHHHHHHSSHHHHS--SCS------SCTTTSCEEECHH---HHH-TTTCCCEEEEECTTCEEEECTT
T ss_pred eEEEEeCHHHHHHHHHHHHHhChhhhh--hCH------HHhhCCcccCCHH---HHH-hcCCceEEEEECCCCEEEECCC
Confidence 489999999999999999988754 32 332 2355677888885 344 4799999999999999999999
Q ss_pred CccccccccccceeeccccCcccHH
Q 002957 786 CPHQVRNLKSCTKVAVDFVSPENVD 810 (863)
Q Consensus 786 CPHQVRNLkSCIKVAlDFVSPEnV~ 810 (863)
+=|.|.|+--|+..|..|..|+=+.
T Consensus 321 aYH~gfn~Gfn~aEAvNFA~~~Wl~ 345 (373)
T 3opt_A 321 GYHAGFNYGYNLAESVNFALEEWLP 345 (373)
T ss_dssp CCEEEEESSSEEEEEEEECCC----
T ss_pred ceEEEEecCccHHHHHccCcHHHHH
Confidence 9999999999999999999997664
No 18
>2ox0_A JMJC domain-containing histone demethylation PROT; double-stranded beta helix, demethylase, oxygenase, SGC, STR genomics, structural genomics consortium, oxidoreductase; HET: MLY ALY OGA; 1.95A {Homo sapiens} PDB: 2oq7_A* 2os2_A* 2ot7_A* 2oq6_A* 2vd7_A* 2ybk_A* 2ybp_A* 2ybs_A* 3njy_A* 3pdq_A* 3u4s_A* 2p5b_A* 2q8c_A* 2q8d_A* 2q8e_A* 2gp5_A* 2gp3_A* 2wwj_A* 2pxj_A* 2xml_A*
Probab=94.80 E-value=0.045 Score=60.46 Aligned_cols=95 Identities=16% Similarity=0.148 Sum_probs=78.7
Q ss_pred ceEEEeecCCChhHHHHHHHHHHHhhccccCCCCCcccCCcccCccccCHHHHHHHHHHhCccceEEEeecCceEEecCC
Q 002957 706 GALWDIFRRQDVPKLEAYLRKHFKEFRHVYCSPVEQVIHPIHDQCFYLSSEHKKKLKEEFGVEPWTFEQKLGEAVFIPAG 785 (863)
Q Consensus 706 GALWDIFRreDvpKLreYL~kh~~EFrh~~~~pv~~v~dPIHDQsfYLd~ehk~rLkEEyGVEpWTF~Q~lGEAVFIPAG 785 (863)
--.|=.=.++++.|+++++++++-+.-. .|. +=+|...+.++++. |+ +.||.-.+++|++||.|++=.|
T Consensus 227 pK~WY~VP~~~~~kfE~l~~~~~P~~~~-~~~------~~L~h~~~~isP~~---L~-~~GIpv~r~vQ~pGEfViTfP~ 295 (381)
T 2ox0_A 227 PKSWYSVPPEHGKRLERLAKGFFPGSAQ-SCE------AFLRHKMTLISPLM---LK-KYGIPFDKVTQEAGEFMITFPY 295 (381)
T ss_dssp CEEEEEECGGGHHHHHHHHHHHSHHHHH-HCT------TGGGGSCEEECHHH---HH-HTTCCCEEEEECTTCEEEECTT
T ss_pred ceEEEecCHHHHHHHHHHHHHhChhhhh-cch------HHhhccccccCHHH---HH-HCCCceEEEEecCCCEEEECCC
Confidence 3589999999999999999988654211 232 33566788888853 33 4799999999999999999999
Q ss_pred CccccccccccceeeccccCcccHHH
Q 002957 786 CPHQVRNLKSCTKVAVDFVSPENVDE 811 (863)
Q Consensus 786 CPHQVRNLkSCIKVAlDFVSPEnV~e 811 (863)
+=|.|.|+=-|+..|..|..|.=+..
T Consensus 296 aYH~gfn~GfN~aEAvNFA~~~Wl~~ 321 (381)
T 2ox0_A 296 GYHAGFNHGFNCAESTNFATRRWIEY 321 (381)
T ss_dssp CEEEEEECSSEEEEEEEECCTTHHHH
T ss_pred cEEEeecCcccHHHHhccCcHHHHHH
Confidence 99999999999999999999876654
No 19
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=93.02 E-value=0.068 Score=57.64 Aligned_cols=36 Identities=11% Similarity=0.222 Sum_probs=32.7
Q ss_pred ccceEEEeecCceEEecCCCccccccc--cccceeecc
Q 002957 767 VEPWTFEQKLGEAVFIPAGCPHQVRNL--KSCTKVAVD 802 (863)
Q Consensus 767 VEpWTF~Q~lGEAVFIPAGCPHQVRNL--kSCIKVAlD 802 (863)
..++.++-.+||+.|||+|.+|||+++ ..|+.|.+-
T Consensus 215 ~~~~~~~L~pGD~LyiP~gwwH~v~s~~~~~slsvsi~ 252 (342)
T 1vrb_A 215 PDAEIVNLTPGTMLYLPRGLWHSTKSDQATLALNITFG 252 (342)
T ss_dssp CSSEEEEECTTCEEEECTTCEEEEECSSCEEEEEEEEC
T ss_pred CCceEEEECCCcEEEeCCCccEEEEECCCCceEEEEEC
Confidence 567999999999999999999999999 468888877
No 20
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=92.01 E-value=0.074 Score=46.55 Aligned_cols=59 Identities=25% Similarity=0.429 Sum_probs=39.4
Q ss_pred ccCCcccCccccCHHHHHHHHHHhCccceEEEeecCceEEecCCCccccccccccceeeccccCcc
Q 002957 742 VIHPIHDQCFYLSSEHKKKLKEEFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPE 807 (863)
Q Consensus 742 v~dPIHDQsfYLd~ehk~rLkEEyGVEpWTF~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 807 (863)
..|| +++-+|+..-.- ++.+..=++.=..||+++||+|.||+++|...|.-+.+ ++.||
T Consensus 56 H~H~-~~e~~~vl~G~~-----~~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~v-~~~~~ 114 (115)
T 1yhf_A 56 HSSP-GDAMVTILSGLA-----EITIDQETYRVAEGQTIVMPAGIPHALYAVEAFQMLLV-VVKPE 114 (115)
T ss_dssp ECCS-SEEEEEEEESEE-----EEEETTEEEEEETTCEEEECTTSCEEEEESSCEEEEEE-EECSC
T ss_pred EECC-CcEEEEEEeCEE-----EEEECCEEEEECCCCEEEECCCCCEEEEECCCceEEEE-EEccC
Confidence 3455 556666644332 13345556777899999999999999999886544443 34444
No 21
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=91.96 E-value=0.049 Score=49.04 Aligned_cols=24 Identities=25% Similarity=0.422 Sum_probs=20.6
Q ss_pred EEeecCceEEecCCCccccccccc
Q 002957 772 FEQKLGEAVFIPAGCPHQVRNLKS 795 (863)
Q Consensus 772 F~Q~lGEAVFIPAGCPHQVRNLkS 795 (863)
+.=..||.|+||||+||+++|.-.
T Consensus 75 ~~l~~Gd~i~ipa~~~H~~~n~~~ 98 (112)
T 2opk_A 75 RVMRPGDWLHVPAHCRHRVAWTDG 98 (112)
T ss_dssp EEECTTEEEEECTTCCEEEEEECS
T ss_pred EEECCCCEEEECCCCcEEEEeCCC
Confidence 444679999999999999999863
No 22
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=91.81 E-value=0.059 Score=47.29 Aligned_cols=58 Identities=21% Similarity=0.264 Sum_probs=39.5
Q ss_pred ccCCcccCccccCHHHHHHHHHHhCccceEEEeecCceEEecCCCccccccccccceeeccccCcc
Q 002957 742 VIHPIHDQCFYLSSEHKKKLKEEFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPE 807 (863)
Q Consensus 742 v~dPIHDQsfYLd~ehk~rLkEEyGVEpWTF~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 807 (863)
..|| ++|-+|+-.-.- ++-+..=++.=..||+++||+|+||+++|...|. .+.+.+|.
T Consensus 50 H~H~-~~e~~~vl~G~~-----~~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~--~l~v~~p~ 107 (116)
T 2pfw_A 50 HAHR-HSQVSYVVEGEF-----HVNVDGVIKVLTAGDSFFVPPHVDHGAVCPTGGI--LIDTFSPA 107 (116)
T ss_dssp ECCS-SEEEEEEEEECE-----EEEETTEEEEECTTCEEEECTTCCEEEEESSCEE--EEEEEESC
T ss_pred EECC-cceEEEEEeeEE-----EEEECCEEEEeCCCCEEEECcCCceeeEeCCCcE--EEEEECCc
Confidence 4566 666666643322 2334444677789999999999999999998773 34444553
No 23
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=91.63 E-value=0.1 Score=47.31 Aligned_cols=41 Identities=32% Similarity=0.244 Sum_probs=31.2
Q ss_pred ccceEEEeecCceEEecCCCccccccccccceeeccccCcc
Q 002957 767 VEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPE 807 (863)
Q Consensus 767 VEpWTF~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 807 (863)
+..=++.=..||+|+||+|+||+++|....--+.+-+++|.
T Consensus 76 ~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~l~i~~~~ 116 (145)
T 3ht1_A 76 DQGRTEEVGPGEAIFIPRGEPHGFVTGPGQTCRFLVVAPCE 116 (145)
T ss_dssp GGTEEEEECTTCEEEECTTCCBEEECCTTCCEEEEEEEESC
T ss_pred ECCEEEEECCCCEEEECCCCeEEeEcCCCCCEEEEEEECCC
Confidence 44556777899999999999999999876544455555554
No 24
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=91.49 E-value=0.08 Score=47.59 Aligned_cols=42 Identities=21% Similarity=0.371 Sum_probs=31.3
Q ss_pred hCccceEEEeecCceEEecCCCccccccccccceeeccccCcc
Q 002957 765 FGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPE 807 (863)
Q Consensus 765 yGVEpWTF~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 807 (863)
+-|..=++.=..||+|+||+|.||+++|...+.= .+-+|.|.
T Consensus 69 ~~i~~~~~~l~~Gd~i~ip~~~~H~~~~~~~~~~-~~~~v~p~ 110 (114)
T 3fjs_A 69 IGVDGAQRRLHQGDLLYLGAGAAHDVNAITNTSL-LVTVVLVD 110 (114)
T ss_dssp EEETTEEEEECTTEEEEECTTCCEEEEESSSEEE-EEEEECC-
T ss_pred EEECCEEEEECCCCEEEECCCCcEEEEeCCCcEE-EEEEEeCC
Confidence 4455557788899999999999999999976543 33555554
No 25
>2fc7_A ZZZ3 protein; structure genomics, ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=91.29 E-value=0.086 Score=46.63 Aligned_cols=36 Identities=19% Similarity=0.676 Sum_probs=30.5
Q ss_pred CCceecCCCCc-ccccccccCCCCC----cccchhchHHHh
Q 002957 256 DERVYCNHCAT-SIIDLHRSCPKCS----YELCLTCCKEIC 291 (863)
Q Consensus 256 DERv~CD~CkT-SI~D~HRsC~~Cs----yDLCL~CC~ELR 291 (863)
-..+.||.|.. +|+-.-..|..|. ||||..|....+
T Consensus 19 H~~~~Cd~C~~~pI~G~RykC~~C~d~~~yDLC~~C~~~g~ 59 (82)
T 2fc7_A 19 HVGFKCDNCGIEPIQGVRWHCQDCPPEMSLDFCDSCSDCLH 59 (82)
T ss_dssp ESSCCCSSSCCSSEESCEEEESSSCSSSCCEEEGGGTTCCC
T ss_pred eCcCCCCCCCCCcceeceEECCcCCCCcceecHHHHHhCcc
Confidence 34678999995 8999999999996 999999998544
No 26
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=91.21 E-value=0.065 Score=46.19 Aligned_cols=39 Identities=18% Similarity=0.296 Sum_probs=29.5
Q ss_pred Ccc-ceEEEeecCceEEecCCCccccccccccceeeccccCc
Q 002957 766 GVE-PWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSP 806 (863)
Q Consensus 766 GVE-pWTF~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSP 806 (863)
.+. .=++.=..||+++||+|.||+++|...+. .+..++|
T Consensus 69 ~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~--~l~~~~p 108 (110)
T 2q30_A 69 VGDGDAVIPAPRGAVLVAPISTPHGVRAVTDMK--VLVTIAP 108 (110)
T ss_dssp ECGGGCEEEECTTEEEEEETTSCEEEEESSSEE--EEEEEES
T ss_pred EeCCCEEEEECCCCEEEeCCCCcEEEEEcCCcE--EEEEECC
Confidence 344 45677789999999999999999998753 3444454
No 27
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=90.92 E-value=0.077 Score=47.12 Aligned_cols=24 Identities=33% Similarity=0.387 Sum_probs=20.7
Q ss_pred EEeecCceEEecCCCccccccccc
Q 002957 772 FEQKLGEAVFIPAGCPHQVRNLKS 795 (863)
Q Consensus 772 F~Q~lGEAVFIPAGCPHQVRNLkS 795 (863)
+.-..||++|||+|.+|++.|.-+
T Consensus 61 ~~l~~G~~~~ip~G~~H~~~N~g~ 84 (98)
T 3lag_A 61 AQLKTGRSYARKAGVQHDVRNEST 84 (98)
T ss_dssp CCBCTTCCEEECTTCEEEEBCCSS
T ss_pred EEecCCcEEEEcCCCcEECEECCC
Confidence 445789999999999999999754
No 28
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=90.86 E-value=0.11 Score=46.23 Aligned_cols=37 Identities=22% Similarity=0.207 Sum_probs=28.7
Q ss_pred eEEEeecCceEEecCCCccccccccccceeeccccCc
Q 002957 770 WTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSP 806 (863)
Q Consensus 770 WTF~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSP 806 (863)
=++.=..||+|+||+|.||+++|..+.--+.+.+++|
T Consensus 79 ~~~~l~~Gd~~~i~~~~~H~~~n~~~~~~~~l~v~~p 115 (125)
T 3h8u_A 79 IVTHLKAGDIAIAKPGQVHGAMNSGPEPFIFVSVVAP 115 (125)
T ss_dssp CEEEEETTEEEEECTTCCCEEEECSSSCEEEEEEEES
T ss_pred eEEEeCCCCEEEECCCCEEEeEeCCCCCEEEEEEECC
Confidence 3556678999999999999999987654455555665
No 29
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=90.75 E-value=0.11 Score=43.73 Aligned_cols=38 Identities=32% Similarity=0.414 Sum_probs=26.7
Q ss_pred ceEEEeecCceEEecCCCccccccccccceeeccccCc
Q 002957 769 PWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSP 806 (863)
Q Consensus 769 pWTF~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSP 806 (863)
.=++.=..||+++||+|.||+++|...---+.+-+++|
T Consensus 66 ~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~~~v~~p 103 (105)
T 1v70_A 66 EEEALLAPGMAAFAPAGAPHGVRNESASPALLLVVTAP 103 (105)
T ss_dssp TEEEEECTTCEEEECTTSCEEEECCSSSCEEEEEEEES
T ss_pred CEEEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEeCC
Confidence 33566679999999999999999985422233344444
No 30
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=90.33 E-value=0.23 Score=44.21 Aligned_cols=59 Identities=27% Similarity=0.359 Sum_probs=40.4
Q ss_pred ccCCcccCccccCHHHHHHHHHHhCccceEEEeecCceEEecCCCccccccccccceeeccccCcc
Q 002957 742 VIHPIHDQCFYLSSEHKKKLKEEFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPE 807 (863)
Q Consensus 742 v~dPIHDQsfYLd~ehk~rLkEEyGVEpWTF~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 807 (863)
..|| ++|-+|+-.-.- ++-|..-++.=..||+|+||+|+||.++|... --+.+.+++|-
T Consensus 57 H~H~-~~e~~~vl~G~~-----~~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~-~~~~l~v~~p~ 115 (126)
T 4e2g_A 57 HEHP-HEQAGVMLEGTL-----ELTIGEETRVLRPGMAYTIPGGVRHRARTFED-GCLVLDIFSPP 115 (126)
T ss_dssp ECCS-SEEEEEEEEECE-----EEEETTEEEEECTTEEEEECTTCCEEEECCTT-CEEEEEEEESC
T ss_pred ccCC-CceEEEEEEeEE-----EEEECCEEEEeCCCCEEEECCCCcEEeEECCC-CEEEEEEECCC
Confidence 3566 466666544322 23445556777899999999999999999988 23455666664
No 31
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=90.04 E-value=0.11 Score=45.65 Aligned_cols=36 Identities=8% Similarity=0.132 Sum_probs=28.6
Q ss_pred hCccceEEEeecCceEEecCCCccccccccccceee
Q 002957 765 FGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVA 800 (863)
Q Consensus 765 yGVEpWTF~Q~lGEAVFIPAGCPHQVRNLkSCIKVA 800 (863)
+.|..=++.=..||+++||||.||.++|...|.=+.
T Consensus 71 ~~i~~~~~~l~~Gd~i~i~~~~~H~~~~~~~~~~~~ 106 (114)
T 2ozj_A 71 ITFDDQKIDLVPEDVLMVPAHKIHAIAGKGRFKMLQ 106 (114)
T ss_dssp EEETTEEEEECTTCEEEECTTCCBEEEEEEEEEEEE
T ss_pred EEECCEEEEecCCCEEEECCCCcEEEEeCCCcEEEE
Confidence 445566777889999999999999999987664443
No 32
>1tot_A CREB-binding protein; zinc binding, CBP, TAZ2, transferase; NMR {Mus musculus} SCOP: g.44.1.6
Probab=90.02 E-value=0.095 Score=42.74 Aligned_cols=33 Identities=27% Similarity=0.863 Sum_probs=28.2
Q ss_pred ceecCCCCcccccccccCCCC-CcccchhchHHHh
Q 002957 258 RVYCNHCATSIIDLHRSCPKC-SYELCLTCCKEIC 291 (863)
Q Consensus 258 Rv~CD~CkTSI~D~HRsC~~C-syDLCL~CC~ELR 291 (863)
.+.||+|...| -....|..| .||||..|...-.
T Consensus 6 ~~~Cd~C~~~i-g~R~~C~~C~dyDLC~~C~~~~~ 39 (52)
T 1tot_A 6 VYTCNECKHHV-ETRWHCTVCEDYDLCINCYNTKS 39 (52)
T ss_dssp CEEETTTTEEE-SSEEEESSSSSCEECHHHHHHHC
T ss_pred EEECCCCCCCC-cceEEcCCCCCchhHHHHHhCCC
Confidence 47899999996 678889999 6999999998644
No 33
>2dip_A Zinc finger SWIM domain-containing protein 2; ZZ domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=90.02 E-value=0.097 Score=47.81 Aligned_cols=35 Identities=29% Similarity=0.744 Sum_probs=30.2
Q ss_pred CCceecCCCCc-ccccccccCCCC-CcccchhchHHH
Q 002957 256 DERVYCNHCAT-SIIDLHRSCPKC-SYELCLTCCKEI 290 (863)
Q Consensus 256 DERv~CD~CkT-SI~D~HRsC~~C-syDLCL~CC~EL 290 (863)
-..+.||.|.. +|.-+-..|..| .||||..|...-
T Consensus 29 H~gv~Cd~C~~~pI~G~RykC~~C~d~DLC~~C~~~~ 65 (98)
T 2dip_A 29 HLGIPCNNCKQFPIEGKCYKCTECIEYHLCQECFDSY 65 (98)
T ss_dssp CCCCCCSSSCCSSCCSCEEEESSSSSCEEEHHHHHTT
T ss_pred cCCCCCcCCCCCCcccCeEECCCCCCccHHHHHHccC
Confidence 34589999996 899999999999 899999998754
No 34
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=89.88 E-value=0.12 Score=45.64 Aligned_cols=36 Identities=22% Similarity=0.345 Sum_probs=26.7
Q ss_pred EeecCceEEecCCCcccccccccc--ceeeccccCccc
Q 002957 773 EQKLGEAVFIPAGCPHQVRNLKSC--TKVAVDFVSPEN 808 (863)
Q Consensus 773 ~Q~lGEAVFIPAGCPHQVRNLkSC--IKVAlDFVSPEn 808 (863)
.=..||++|||+|.||+++|..+. .-+.+.|-+|+.
T Consensus 69 ~l~~Gd~i~ip~~~~H~~~~~~~~~~~~l~i~~~~~~~ 106 (117)
T 2b8m_A 69 NYKEGNIVYVPFNVKMLIQNINSDILEFFVVKAPHPKK 106 (117)
T ss_dssp EEETTCEEEECTTCEEEEECCSSSEEEEEEEECSCGGG
T ss_pred EeCCCCEEEECCCCcEEeEcCCCCCEEEEEEECCCCCC
Confidence 567899999999999999998653 444444444543
No 35
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=89.57 E-value=0.14 Score=55.03 Aligned_cols=40 Identities=20% Similarity=0.270 Sum_probs=34.1
Q ss_pred EEEeecCceEEecCCCccccccccccceeeccccCc-ccHHH
Q 002957 771 TFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSP-ENVDE 811 (863)
Q Consensus 771 TF~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSP-EnV~e 811 (863)
++.=+.||+||||||.||+++|.... +..+=|.+| ..++.
T Consensus 292 ~~~l~~Gd~~~iPag~~h~~~~~~~~-~~~l~~~~g~~g~~~ 332 (350)
T 1juh_A 292 ATELGSGDVAFIPGGVEFKYYSEAYF-SKVLFVSSGSDGLDQ 332 (350)
T ss_dssp CEEECTTCEEEECTTCCEEEEESSSS-EEEEEEEESSSSHHH
T ss_pred EEEeCCCCEEEECCCCCEEEEecCCe-EEEEEEecCccchhh
Confidence 45567899999999999999998776 888888888 77766
No 36
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=89.53 E-value=0.17 Score=42.88 Aligned_cols=29 Identities=24% Similarity=0.461 Sum_probs=23.6
Q ss_pred EEEeecCceEEecCCCcccccccccccee
Q 002957 771 TFEQKLGEAVFIPAGCPHQVRNLKSCTKV 799 (863)
Q Consensus 771 TF~Q~lGEAVFIPAGCPHQVRNLkSCIKV 799 (863)
++.=..||+++||+|.+|+++|...|.=+
T Consensus 69 ~~~l~~Gd~~~ip~~~~H~~~~~~~~~~l 97 (102)
T 3d82_A 69 NITLQAGEMYVIPKGVEHKPMAKEECKIM 97 (102)
T ss_dssp EEEEETTEEEEECTTCCBEEEEEEEEEEE
T ss_pred EEEEcCCCEEEECCCCeEeeEcCCCCEEE
Confidence 45557899999999999999998665433
No 37
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=89.50 E-value=0.22 Score=51.41 Aligned_cols=77 Identities=13% Similarity=0.150 Sum_probs=53.0
Q ss_pred cccCCcccCccccCHHHHHHHHHHh--------Cccce----------EEEeecCceEEecCCCccccccccccc-eeec
Q 002957 741 QVIHPIHDQCFYLSSEHKKKLKEEF--------GVEPW----------TFEQKLGEAVFIPAGCPHQVRNLKSCT-KVAV 801 (863)
Q Consensus 741 ~v~dPIHDQsfYLd~ehk~rLkEEy--------GVEpW----------TF~Q~lGEAVFIPAGCPHQVRNLkSCI-KVAl 801 (863)
...||-.+..||+-.-.-. + .. |-+|| ++.=..||.||||+|+||..+|.-.-- ++.+
T Consensus 58 ~H~H~~~~E~~yVLeG~~~-~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GD~i~iP~g~~H~~~N~~~~~~~~~l 134 (239)
T 2xlg_A 58 PHIHYFINEWFWTPEGGIE-L--FHSTKQYPNMDELPVVGGAGRGDLYSIQSEPKQLIYSPNHYMHGFVNPTDKTLPIVF 134 (239)
T ss_dssp SEEESSEEEEEEETTCCCE-E--EEEEEECCCTTSCCSTTTTCCEEEEEEECCTTEEEEECTTEEEEEECCSSSCEEEEE
T ss_pred CeECCCccEEEEEEEeEEE-E--EEEecccccCCCcccccccccCceeEEEECCCCEEEECCCCCEEEEeCCCCCEEEEE
Confidence 3456766777776544221 1 12 44566 788889999999999999999976532 2213
Q ss_pred ccc----------CcccHHHHHHHHHHhh
Q 002957 802 DFV----------SPENVDECLRLTKEFR 820 (863)
Q Consensus 802 DFV----------SPEnV~eC~rLTeEfR 820 (863)
=++ +|..+.+|++...+..
T Consensus 135 ~~~~~~~~~~~~~~p~~~e~~f~~l~~~~ 163 (239)
T 2xlg_A 135 VWMRNEVAPDFPYHDGGMREYFQAVGPRI 163 (239)
T ss_dssp EEEECSSCTTCSCTTCSHHHHHHHHSCBC
T ss_pred EEEecccChhhccCcchHHHHHHHhhhhc
Confidence 334 8888999998887653
No 38
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=89.02 E-value=0.22 Score=42.74 Aligned_cols=41 Identities=27% Similarity=0.394 Sum_probs=29.3
Q ss_pred ccceEEEeecCceEEecCCCccccccccccceeeccccCcc
Q 002957 767 VEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPE 807 (863)
Q Consensus 767 VEpWTF~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 807 (863)
|..=++.=..||+++||+|.||+.+|..+---+.+-+++|.
T Consensus 59 ~~~~~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~v~~~~ 99 (113)
T 2gu9_A 59 VDGHTQALQAGSLIAIERGQAHEIRNTGDTPLKTVNFYHPP 99 (113)
T ss_dssp ETTEEEEECTTEEEEECTTCCEEEECCSSSCEEEEEEEESC
T ss_pred ECCEEEEeCCCCEEEECCCCcEEeEcCCCCCEEEEEEECCC
Confidence 33446677899999999999999999865333344445554
No 39
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=89.00 E-value=0.24 Score=42.87 Aligned_cols=25 Identities=28% Similarity=0.286 Sum_probs=21.5
Q ss_pred EEEeecCceEEecCCCccccccccc
Q 002957 771 TFEQKLGEAVFIPAGCPHQVRNLKS 795 (863)
Q Consensus 771 TF~Q~lGEAVFIPAGCPHQVRNLkS 795 (863)
++.=..||+|+||||.||+++|.-+
T Consensus 60 ~~~l~~Gd~~~~p~~~~H~~~N~g~ 84 (97)
T 2fqp_A 60 TSQLTRGVSYTRPEGVEHNVINPSD 84 (97)
T ss_dssp EEEECTTCCEEECTTCEEEEECCSS
T ss_pred EEEEcCCCEEEeCCCCcccCEeCCC
Confidence 4556779999999999999999864
No 40
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=88.74 E-value=0.14 Score=45.99 Aligned_cols=31 Identities=19% Similarity=0.236 Sum_probs=26.1
Q ss_pred ceEEEeecCceEEecCCCcccccccccccee
Q 002957 769 PWTFEQKLGEAVFIPAGCPHQVRNLKSCTKV 799 (863)
Q Consensus 769 pWTF~Q~lGEAVFIPAGCPHQVRNLkSCIKV 799 (863)
.-++.=..||+|+||+|.||+.+|...+-|+
T Consensus 67 g~~~~l~~GD~i~ip~g~~H~~~n~~~~~~~ 97 (101)
T 1o5u_A 67 GKKYVIEKGDLVTFPKGLRCRWKVLEPVRKH 97 (101)
T ss_dssp CCEEEEETTCEEEECTTCEEEEEEEEEEEEE
T ss_pred CCEEEECCCCEEEECCCCcEEEEeCCCeeEE
Confidence 4567788999999999999999998776554
No 41
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=88.72 E-value=0.16 Score=49.08 Aligned_cols=61 Identities=15% Similarity=0.107 Sum_probs=39.9
Q ss_pred cccCCcccCccccCHHHHHHHHHHhCccceEEEeecCceEEecCCCcccccccc-ccceeeccccCcc
Q 002957 741 QVIHPIHDQCFYLSSEHKKKLKEEFGVEPWTFEQKLGEAVFIPAGCPHQVRNLK-SCTKVAVDFVSPE 807 (863)
Q Consensus 741 ~v~dPIHDQsfYLd~ehk~rLkEEyGVEpWTF~Q~lGEAVFIPAGCPHQVRNLk-SCIKVAlDFVSPE 807 (863)
...|+ ++|-+|+-.--- ++-|..=++.=..||+||||+|.||+++|.. +---+.+-+++|+
T Consensus 71 ~H~H~-~~E~~~Vl~G~~-----~~~i~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~~~~ 132 (167)
T 3ibm_A 71 LERHE-HTHVVMVVRGHA-----EVVLDDRVEPLTPLDCVYIAPHAWHQIHATGANEPLGFLCIVDSD 132 (167)
T ss_dssp CBBCS-SCEEEEEEESEE-----EEEETTEEEEECTTCEEEECTTCCEEEEEESSSCCEEEEEEEESS
T ss_pred CccCC-CcEEEEEEeCEE-----EEEECCEEEEECCCCEEEECCCCcEEEEeCCCCCCEEEEEEEeCC
Confidence 34566 677676644321 2344555777789999999999999999987 4322333345554
No 42
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=88.41 E-value=0.27 Score=47.22 Aligned_cols=41 Identities=24% Similarity=0.173 Sum_probs=29.3
Q ss_pred ccceEEEeecCceEEecCCCccccccccccceeeccccCcc
Q 002957 767 VEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPE 807 (863)
Q Consensus 767 VEpWTF~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 807 (863)
|..=++.=..||+||||+|++|+++|..+---+-+-+++|+
T Consensus 79 v~g~~~~l~~Gd~i~ip~~~~H~~~n~g~~~~~~l~i~~~~ 119 (156)
T 3kgz_A 79 VGETISDVAQGDLVFIPPMTWHQFRANRGDCLGFLCVVNAA 119 (156)
T ss_dssp ETTEEEEEETTCEEEECTTCCEEEECCSSSCEEEEEEEESS
T ss_pred ECCEEEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEEeCC
Confidence 44446677889999999999999999875333334444444
No 43
>2e5r_A Dystrobrevin alpha; ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.90 E-value=0.19 Score=42.37 Aligned_cols=33 Identities=30% Similarity=0.822 Sum_probs=29.3
Q ss_pred eecCCCCc-ccccccccCCCC-CcccchhchHHHh
Q 002957 259 VYCNHCAT-SIIDLHRSCPKC-SYELCLTCCKEIC 291 (863)
Q Consensus 259 v~CD~CkT-SI~D~HRsC~~C-syDLCL~CC~ELR 291 (863)
+.||.|.. +|.-+-..|..| .||||..|...-+
T Consensus 12 ~~Cd~C~~~pi~G~RykC~~C~d~DLC~~C~~~g~ 46 (63)
T 2e5r_A 12 VECSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGH 46 (63)
T ss_dssp SCCSSSCCCSSCSCEEEESSCSSCEECHHHHHHCC
T ss_pred CCCcCCCCcceecceEEecCCCCchhHHHHHhCCC
Confidence 78999996 599999999999 7999999998644
No 44
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=87.78 E-value=0.19 Score=50.82 Aligned_cols=60 Identities=22% Similarity=0.180 Sum_probs=40.9
Q ss_pred ccCCcccCccccCHHHHHHHHHHhCccceEEEeecCceEEecCCCccccccccccceeeccccCcc
Q 002957 742 VIHPIHDQCFYLSSEHKKKLKEEFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPE 807 (863)
Q Consensus 742 v~dPIHDQsfYLd~ehk~rLkEEyGVEpWTF~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 807 (863)
..|| +.|-+|+-.-.- ++-|..=++.=..||+|+||+|+||+++|.-.---+.++.++|-
T Consensus 162 H~H~-~~e~~~Vl~G~~-----~~~i~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v~~p~ 221 (243)
T 3h7j_A 162 HKHR-NEQIGICIGGGY-----DMTVEGCTVEMKFGTAYFCEPREDHGAINRSEKESKSINIFFPP 221 (243)
T ss_dssp ECCS-SEEEEEECSSCE-----EEEETTEEEEECTTCEEEECTTCCEEEEECSSSCEEEEEEEESC
T ss_pred EeCC-CcEEEEEEECEE-----EEEECCEEEEECCCCEEEECCCCcEEeEeCCCCCEEEEEEEcCC
Confidence 3555 566667654422 23444546667899999999999999999866444556666664
No 45
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=86.52 E-value=0.34 Score=42.20 Aligned_cols=37 Identities=19% Similarity=0.410 Sum_probs=26.6
Q ss_pred eEEEeecCceEEecCCCccccccccccceeeccccCcccH
Q 002957 770 WTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENV 809 (863)
Q Consensus 770 WTF~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV 809 (863)
=++.=..||+++||+|.||..+|...|.=+ ++.|...
T Consensus 67 ~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~l---~i~~~~~ 103 (107)
T 2i45_A 67 GSMTIREGEMAVVPKSVSHRPRSENGCSLV---LIELSDP 103 (107)
T ss_dssp CEEEECTTEEEEECTTCCEEEEEEEEEEEE---EEECC--
T ss_pred cEEEECCCCEEEECCCCcEeeEeCCCeEEE---EEECCCc
Confidence 467778899999999999999997655322 3455443
No 46
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=86.30 E-value=0.24 Score=47.65 Aligned_cols=43 Identities=14% Similarity=0.060 Sum_probs=33.3
Q ss_pred hCccceEEEeecCceEEecCCCccccccccccceeeccccCccc
Q 002957 765 FGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPEN 808 (863)
Q Consensus 765 yGVEpWTF~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEn 808 (863)
+.|..=++.=..||+|+||+|.||+.+|.-+.-- .+-++.|..
T Consensus 139 ~~~~~~~~~l~~GD~i~i~~~~~H~~~n~~~~~~-~l~v~~~~~ 181 (192)
T 1y9q_A 139 VFFDEQWHELQQGEHIRFFSDQPHGYAAVTEKAV-FQNIVAYPR 181 (192)
T ss_dssp EEETTEEEEECTTCEEEEECSSSEEEEESSSCEE-EEEEEECCC
T ss_pred EEECCEEEEeCCCCEEEEcCCCCeEeECCCCCcE-EEEEEecCc
Confidence 4556667788999999999999999999855332 666777654
No 47
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=86.20 E-value=0.22 Score=44.48 Aligned_cols=23 Identities=35% Similarity=0.437 Sum_probs=20.3
Q ss_pred EeecCceEEecCCCccccccccc
Q 002957 773 EQKLGEAVFIPAGCPHQVRNLKS 795 (863)
Q Consensus 773 ~Q~lGEAVFIPAGCPHQVRNLkS 795 (863)
.=..||++++|||.+|+++|--+
T Consensus 62 ~l~aGd~~~~p~G~~H~~~N~g~ 84 (98)
T 2ozi_A 62 QLKTGRSYARKAGVQHDVRNEST 84 (98)
T ss_dssp CBCTTCCEEECTTCEEEEEECSS
T ss_pred EECCCCEEEECCCCceeCEECCC
Confidence 34689999999999999999765
No 48
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=85.88 E-value=0.3 Score=46.05 Aligned_cols=25 Identities=28% Similarity=0.237 Sum_probs=23.2
Q ss_pred eEEEeecCceEEecCCCcccccccc
Q 002957 770 WTFEQKLGEAVFIPAGCPHQVRNLK 794 (863)
Q Consensus 770 WTF~Q~lGEAVFIPAGCPHQVRNLk 794 (863)
-++.=..||+|+||+|+||+++|..
T Consensus 88 ~~~~l~~Gd~i~ip~~~~H~~~n~~ 112 (163)
T 1lr5_A 88 QEIPFFQNTTFSIPVNDPHQVWNSD 112 (163)
T ss_dssp EEEEECTTEEEEECTTCCEEEECCC
T ss_pred EEEEeCCCCEEEECCCCcEEeEeCC
Confidence 7788889999999999999999986
No 49
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=85.49 E-value=0.35 Score=43.31 Aligned_cols=29 Identities=14% Similarity=0.156 Sum_probs=24.5
Q ss_pred CccceEEEeecCceEEecCCCcccccccc
Q 002957 766 GVEPWTFEQKLGEAVFIPAGCPHQVRNLK 794 (863)
Q Consensus 766 GVEpWTF~Q~lGEAVFIPAGCPHQVRNLk 794 (863)
.|..-++.=..||+|+||+|.||+.+|..
T Consensus 62 ~i~~~~~~l~~Gd~i~i~~~~~H~~~~~~ 90 (125)
T 3cew_A 62 TIDGEKIELQAGDWLRIAPDGKRQISAAS 90 (125)
T ss_dssp EETTEEEEEETTEEEEECTTCCEEEEEBT
T ss_pred EECCEEEEeCCCCEEEECCCCcEEEEcCC
Confidence 34455677889999999999999999984
No 50
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=85.20 E-value=0.47 Score=44.18 Aligned_cols=25 Identities=40% Similarity=0.375 Sum_probs=21.9
Q ss_pred EEEeecCceEEecCCCccccccccc
Q 002957 771 TFEQKLGEAVFIPAGCPHQVRNLKS 795 (863)
Q Consensus 771 TF~Q~lGEAVFIPAGCPHQVRNLkS 795 (863)
++.=..||+|+||+|.||+++|..+
T Consensus 89 ~~~l~~Gd~i~ip~g~~H~~~n~~~ 113 (148)
T 2oa2_A 89 QEEVFDDYAILIPAGTWHNVRNTGN 113 (148)
T ss_dssp EEEEETTCEEEECTTCEEEEEECSS
T ss_pred eEEECCCCEEEECCCCcEEEEECCC
Confidence 3677899999999999999999853
No 51
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=84.99 E-value=0.49 Score=44.42 Aligned_cols=41 Identities=20% Similarity=0.136 Sum_probs=30.6
Q ss_pred ccceEEEeecCceEEecCC-CccccccccccceeeccccCcc
Q 002957 767 VEPWTFEQKLGEAVFIPAG-CPHQVRNLKSCTKVAVDFVSPE 807 (863)
Q Consensus 767 VEpWTF~Q~lGEAVFIPAG-CPHQVRNLkSCIKVAlDFVSPE 807 (863)
|..=++.=..||+|+||+| ++|+++|.-.---+.+-+.+|-
T Consensus 83 ~~~~~~~l~~Gd~i~i~~~~~~H~~~n~~~~~~~~l~v~~p~ 124 (162)
T 3l2h_A 83 MENDQYPIAPGDFVGFPCHAAAHSISNDGTETLVCLVIGQRL 124 (162)
T ss_dssp ETTEEEEECTTCEEEECTTSCCEEEECCSSSCEEEEEEEECC
T ss_pred ECCEEEEeCCCCEEEECCCCceEEeEeCCCCCEEEEEEECCC
Confidence 4444677889999999998 9999999766444455555553
No 52
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=84.94 E-value=0.81 Score=40.73 Aligned_cols=56 Identities=14% Similarity=0.192 Sum_probs=36.3
Q ss_pred hCccceEEEeecCceEEecCCCcccccccc--ccceeeccccCcccHHHHHHHHHHhhcCCh
Q 002957 765 FGVEPWTFEQKLGEAVFIPAGCPHQVRNLK--SCTKVAVDFVSPENVDECLRLTKEFRLLPK 824 (863)
Q Consensus 765 yGVEpWTF~Q~lGEAVFIPAGCPHQVRNLk--SCIKVAlDFVSPEnV~eC~rLTeEfR~LP~ 824 (863)
+-|..=++.=..||+++||+|.+|+++|.. .|.-+++ +++|+-+. .+..+...-|.
T Consensus 67 ~~i~~~~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~i-~f~~~~~~---~~~~~~~~~~~ 124 (128)
T 4i4a_A 67 IRINDEDFPVTKGDLIIIPLDSEHHVINNNQEDFHFYTI-WWDKESTL---NFLTRLEQDHH 124 (128)
T ss_dssp EEETTEEEEEETTCEEEECTTCCEEEEECSSSCEEEEEE-EECHHHHH---HHHHHHHHC--
T ss_pred EEECCEEEEECCCcEEEECCCCcEEeEeCCCCCEEEEEE-EECHHHHH---HHHHhcccccc
Confidence 345556777899999999999999999973 3343444 34555444 45555555443
No 53
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=84.44 E-value=0.41 Score=46.49 Aligned_cols=30 Identities=23% Similarity=0.008 Sum_probs=24.7
Q ss_pred CccceEEEeecCceEEecCCCccccccccc
Q 002957 766 GVEPWTFEQKLGEAVFIPAGCPHQVRNLKS 795 (863)
Q Consensus 766 GVEpWTF~Q~lGEAVFIPAGCPHQVRNLkS 795 (863)
-|..=++.=..||+||||+|.||+++|...
T Consensus 87 ~v~g~~~~l~~GD~i~ip~g~~H~~~n~~~ 116 (166)
T 3jzv_A 87 MVGRAVSAVAPYDLVTIPGWSWHQFRAPAD 116 (166)
T ss_dssp EETTEEEEECTTCEEEECTTCCEEEECCTT
T ss_pred EECCEEEEeCCCCEEEECCCCcEEeEeCCC
Confidence 344556777899999999999999999654
No 54
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=84.27 E-value=0.43 Score=43.15 Aligned_cols=29 Identities=21% Similarity=0.106 Sum_probs=23.9
Q ss_pred ccceEEEeecCceEEecCCCccccccccc
Q 002957 767 VEPWTFEQKLGEAVFIPAGCPHQVRNLKS 795 (863)
Q Consensus 767 VEpWTF~Q~lGEAVFIPAGCPHQVRNLkS 795 (863)
|..=++.=..||+++||+|.||+.+|..+
T Consensus 83 i~~~~~~l~~Gd~i~ip~g~~H~~~~~~~ 111 (126)
T 1vj2_A 83 KEQGEETVEEGFYIFVEPNEIHGFRNDTD 111 (126)
T ss_dssp CSSCEEEEETTEEEEECTTCCEEEECCSS
T ss_pred ECCEEEEECCCCEEEECCCCcEEeEeCCC
Confidence 44445666799999999999999999864
No 55
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=83.76 E-value=0.51 Score=45.90 Aligned_cols=61 Identities=18% Similarity=0.186 Sum_probs=42.0
Q ss_pred cCCcccCccccCHHHHHHHHHHhCccceEEEeecCceEEecCCCccccccccccceeeccccCcccHH
Q 002957 743 IHPIHDQCFYLSSEHKKKLKEEFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVD 810 (863)
Q Consensus 743 ~dPIHDQsfYLd~ehk~rLkEEyGVEpWTF~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~ 810 (863)
.|.=+++.+|+-+-.- ++-|.+=++.=..||+||||+|+||..+|...|..+++ +.|-+..
T Consensus 80 ~~~~~eE~~yVLeG~~-----~l~i~g~~~~l~~GD~i~iP~G~~h~~~n~~~a~~l~V--~~P~~~~ 140 (151)
T 4axo_A 80 WTLNYDEIDYVIDGTL-----DIIIDGRKVSASSGELIFIPKGSKIQFSVPDYARFIYV--TYPADWA 140 (151)
T ss_dssp EECSSEEEEEEEEEEE-----EEEETTEEEEEETTCEEEECTTCEEEEEEEEEEEEEEE--EECSCC-
T ss_pred EeCCCcEEEEEEEeEE-----EEEECCEEEEEcCCCEEEECCCCEEEEEeCCCEEEEEE--ECCCCcc
Confidence 3444667777543221 12345567888999999999999999999988877776 4465443
No 56
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=82.66 E-value=0.64 Score=45.69 Aligned_cols=40 Identities=13% Similarity=0.230 Sum_probs=30.7
Q ss_pred cceEEEeecCceEEecCCCccccccccccceeeccccCcc
Q 002957 768 EPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPE 807 (863)
Q Consensus 768 EpWTF~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 807 (863)
+.+++.=..||+|+||+|.||+.+|.-+--=+.+.+++|.
T Consensus 117 ~~~~~~l~~GD~v~ip~g~~H~~~N~g~~~~~~l~v~~~~ 156 (190)
T 1x82_A 117 DAKWISMEPGTVVYVPPYWAHRTVNIGDEPFIFLAIYPAD 156 (190)
T ss_dssp CEEEEEECTTCEEEECTTCEEEEEECSSSCEEEEEEEETT
T ss_pred cEEEEEECCCcEEEECCCCeEEEEECCcccEEEEEEECCC
Confidence 4567888999999999999999999865433445555554
No 57
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=82.53 E-value=0.61 Score=42.75 Aligned_cols=37 Identities=22% Similarity=0.308 Sum_probs=27.0
Q ss_pred ceEEEeecCceEEecCCCccccccc-cccceeeccccCcc
Q 002957 769 PWTFEQKLGEAVFIPAGCPHQVRNL-KSCTKVAVDFVSPE 807 (863)
Q Consensus 769 pWTF~Q~lGEAVFIPAGCPHQVRNL-kSCIKVAlDFVSPE 807 (863)
+=++.=..||+|+||||++|..+|. ..|. .+--++|-
T Consensus 76 g~~~~l~~GD~v~ip~g~~H~~~~~~~~~~--~l~v~~P~ 113 (119)
T 3lwc_A 76 GETVTAGPGEIVYMPKGETVTIRSHEEGAL--TAYVTYPH 113 (119)
T ss_dssp TEEEEECTTCEEEECTTCEEEEEEEEEEEE--EEEEEECC
T ss_pred CEEEEECCCCEEEECCCCEEEEEcCCCCeE--EEEEECCC
Confidence 4466778999999999999999997 3333 33445553
No 58
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=82.26 E-value=0.74 Score=41.52 Aligned_cols=61 Identities=25% Similarity=0.321 Sum_probs=39.1
Q ss_pred ccCCcccCccccCHHHHHHHHHHhCccc-eEEEeecCceEEecCCCccccccccccceeeccccCccc
Q 002957 742 VIHPIHDQCFYLSSEHKKKLKEEFGVEP-WTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPEN 808 (863)
Q Consensus 742 v~dPIHDQsfYLd~ehk~rLkEEyGVEp-WTF~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEn 808 (863)
..|+-.++.+|+-.-.- ++-+.. -++.=..||+|+||+|.||..+|...-. ..+-+++|..
T Consensus 59 H~H~~~~E~~~vl~G~~-----~~~~~~~~~~~l~~Gd~~~ip~g~~H~~~~~~~~~-~~l~~~~p~~ 120 (134)
T 2o8q_A 59 HTHTVGFQLFYVLRGWV-----EFEYEDIGAVMLEAGGSAFQPPGVRHRELRHSDDL-EVLEIVSPAG 120 (134)
T ss_dssp EEECCSCEEEEEEESEE-----EEEETTTEEEEEETTCEEECCTTCCEEEEEECTTC-EEEEEESSTT
T ss_pred EECCCCcEEEEEEeCEE-----EEEECCcEEEEecCCCEEEECCCCcEEeEeCCCCe-EEEEEECCCc
Confidence 34555566666543322 133344 5777899999999999999999965422 3344556654
No 59
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=81.82 E-value=0.52 Score=47.24 Aligned_cols=48 Identities=25% Similarity=0.356 Sum_probs=34.1
Q ss_pred cCCcccCccccCHHHHHHHHHHhCccceEEEeecCceEEecCCCcccccc-cccc
Q 002957 743 IHPIHDQCFYLSSEHKKKLKEEFGVEPWTFEQKLGEAVFIPAGCPHQVRN-LKSC 796 (863)
Q Consensus 743 ~dPIHDQsfYLd~ehk~rLkEEyGVEpWTF~Q~lGEAVFIPAGCPHQVRN-LkSC 796 (863)
.|| +++-+|+-.-.- ++.|..=++.=..||+++||||+||.++| ...|
T Consensus 170 ~H~-~~e~~~Vl~G~~-----~~~i~g~~~~l~~Gd~i~ip~~~~H~~~~~~~~~ 218 (227)
T 3rns_A 170 KAP-GDALVTVLDGEG-----KYYVDGKPFIVKKGESAVLPANIPHAVEAETENF 218 (227)
T ss_dssp CCS-SEEEEEEEEEEE-----EEEETTEEEEEETTEEEEECTTSCEEEECCSSCE
T ss_pred ECC-CcEEEEEEeEEE-----EEEECCEEEEECCCCEEEECCCCcEEEEeCCCCE
Confidence 466 566666543321 24445556777899999999999999999 7665
No 60
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=81.40 E-value=0.66 Score=44.62 Aligned_cols=45 Identities=11% Similarity=0.141 Sum_probs=32.1
Q ss_pred cCCcccCccccCHHHHHHHHHHhCccc----eEEEeecCceEEecCCCccccccc
Q 002957 743 IHPIHDQCFYLSSEHKKKLKEEFGVEP----WTFEQKLGEAVFIPAGCPHQVRNL 793 (863)
Q Consensus 743 ~dPIHDQsfYLd~ehk~rLkEEyGVEp----WTF~Q~lGEAVFIPAGCPHQVRNL 793 (863)
+||- ++.+|+-.-.- ++.|.. =++.=..||+|+||+|.||+++|.
T Consensus 137 ~h~~-~E~~~Vl~G~~-----~~~~~~~~~~~~~~l~~GD~~~~~~~~~H~~~n~ 185 (198)
T 2bnm_A 137 GHAG-NEFLFVLEGEI-----HMKWGDKENPKEALLPTGASMFVEEHVPHAFTAA 185 (198)
T ss_dssp CCSS-CEEEEEEESCE-----EEEESCTTSCEEEEECTTCEEEECTTCCEEEEES
T ss_pred cCCC-eEEEEEEeeeE-----EEEECCcCCcccEEECCCCEEEeCCCCceEEEec
Confidence 4443 56666633321 244555 677888999999999999999998
No 61
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=81.02 E-value=0.57 Score=43.55 Aligned_cols=30 Identities=20% Similarity=0.313 Sum_probs=25.5
Q ss_pred EEeecCceEEecCCCccccccccccceeec
Q 002957 772 FEQKLGEAVFIPAGCPHQVRNLKSCTKVAV 801 (863)
Q Consensus 772 F~Q~lGEAVFIPAGCPHQVRNLkSCIKVAl 801 (863)
+.=..||+|+||+|.||..+|...+-|+-+
T Consensus 89 ~~l~~GD~~~ip~g~~h~~~~~~~~rK~yv 118 (123)
T 3bcw_A 89 HAVKAGDAFIMPEGYTGRWEVDRHVKKIYF 118 (123)
T ss_dssp EEEETTCEEEECTTCCCEEEEEEEEEEEEE
T ss_pred EEECCCCEEEECCCCeEEEEECCceeEEEE
Confidence 445789999999999999999988777653
No 62
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=80.67 E-value=0.72 Score=47.76 Aligned_cols=51 Identities=16% Similarity=0.183 Sum_probs=39.1
Q ss_pred hCccceEEEeecCceEEecCCCccccccccccceeeccccCcccHHHHHHHH
Q 002957 765 FGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVDECLRLT 816 (863)
Q Consensus 765 yGVEpWTF~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~eC~rLT 816 (863)
+-|..-++.=..||.++||+|+||+.+|... --..+-+++|....+.++-.
T Consensus 252 ~~i~~~~~~l~~GD~~~ip~~~~H~~~n~~~-~~~~l~v~~~~~~~~~~~~~ 302 (337)
T 1y3t_A 252 MWTDGQEIQLNPGDFLHVPANTVHSYRLDSH-YTKMVGVLVPGLFEPFFRTL 302 (337)
T ss_dssp EEETTEEEEECTTCEEEECTTCCEEEEECSS-SEEEEEEEESSTTTHHHHHH
T ss_pred EEECCEEEEECCCCEEEECCCCeEEEEECCC-CeEEEEEEcCccHHHHHHHh
Confidence 3455567888999999999999999999876 33455567888887655543
No 63
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=79.28 E-value=1.1 Score=42.71 Aligned_cols=59 Identities=15% Similarity=0.109 Sum_probs=37.9
Q ss_pred CCcccCccccCHHHHHHHHHHhCccceEEEeecCceEEecCC--CccccccccccceeeccccCcc
Q 002957 744 HPIHDQCFYLSSEHKKKLKEEFGVEPWTFEQKLGEAVFIPAG--CPHQVRNLKSCTKVAVDFVSPE 807 (863)
Q Consensus 744 dPIHDQsfYLd~ehk~rLkEEyGVEpWTF~Q~lGEAVFIPAG--CPHQVRNLkSCIKVAlDFVSPE 807 (863)
|+-.++-+|+-.-.- ++-|..=++.=..||+|+||+| .+|+++|.-+---+.+-+.+|-
T Consensus 62 H~~~eE~~~Vl~G~~-----~~~~~~~~~~l~~GD~i~ip~~~~~~H~~~n~~~~~~~~l~v~~p~ 122 (163)
T 3i7d_A 62 HMEQDEFVMVTEGAL-----VLVDDQGEHPMVPGDCAAFPAGDPNGHQFVNRTDAPATFLVVGTRT 122 (163)
T ss_dssp ESSCCEEEEEEESCE-----EEEETTEEEEECTTCEEEECTTCCCCBEEECCSSSCEEEEEEEECC
T ss_pred CCCCcEEEEEEECEE-----EEEECCEEEEeCCCCEEEECCCCCcceEEEECCCCCEEEEEEECCC
Confidence 333345555543322 1334455677889999999999 9999999866444445555543
No 64
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=78.91 E-value=1.3 Score=43.58 Aligned_cols=39 Identities=23% Similarity=0.261 Sum_probs=29.3
Q ss_pred eEEEeecCceEEecCCCccccccccccceeeccccCccc
Q 002957 770 WTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPEN 808 (863)
Q Consensus 770 WTF~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEn 808 (863)
.++.=..||+++||+|.+|.++|.-.---+.+-+.++.+
T Consensus 119 ~~~~l~~GD~~~iP~g~~H~~~N~g~~~~~~l~v~~~~~ 157 (201)
T 1fi2_A 119 YSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFNSQN 157 (201)
T ss_dssp EEEEEETTCEEEECTTCCEEEEECSSSCEEEEEEESSSC
T ss_pred EEEEECCCCEEEECCCCeEEEEeCCCCCEEEEEEECCCC
Confidence 366778899999999999999998654444455555554
No 65
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=78.51 E-value=0.71 Score=49.40 Aligned_cols=17 Identities=29% Similarity=0.651 Sum_probs=15.0
Q ss_pred eecCceEEecCCCcccc
Q 002957 774 QKLGEAVFIPAGCPHQV 790 (863)
Q Consensus 774 Q~lGEAVFIPAGCPHQV 790 (863)
=++|||+|||||.||=.
T Consensus 162 l~pGd~~~ipaGt~HA~ 178 (319)
T 1qwr_A 162 IKPGDFYYVPSGTLHAL 178 (319)
T ss_dssp CCTTCEEEECTTCCEEE
T ss_pred cCCCCEEEcCCCCceEe
Confidence 35899999999999974
No 66
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=78.36 E-value=1.2 Score=41.64 Aligned_cols=35 Identities=20% Similarity=0.132 Sum_probs=25.5
Q ss_pred EEeecCceEEecCCCccccccccccceeeccccCc
Q 002957 772 FEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSP 806 (863)
Q Consensus 772 F~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSP 806 (863)
+.=..||+|+||+|+||+.+|....--+.+-++.|
T Consensus 89 ~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v~~~ 123 (147)
T 2f4p_A 89 RILKKGDVVEIPPNVVHWHGAAPDEELVHIGISTQ 123 (147)
T ss_dssp EEEETTCEEEECTTCCEEEEEBTTBCEEEEEEECC
T ss_pred EEECCCCEEEECCCCcEEeEeCCCCCEEEEEEEcc
Confidence 55679999999999999999986533333334443
No 67
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=77.93 E-value=0.39 Score=47.21 Aligned_cols=47 Identities=15% Similarity=0.208 Sum_probs=35.8
Q ss_pred cccCCcccCccccCH--HHHHHHHHHhCccceEEEeecCceEEecCCCcccccc
Q 002957 741 QVIHPIHDQCFYLSS--EHKKKLKEEFGVEPWTFEQKLGEAVFIPAGCPHQVRN 792 (863)
Q Consensus 741 ~v~dPIHDQsfYLd~--ehk~rLkEEyGVEpWTF~Q~lGEAVFIPAGCPHQVRN 792 (863)
...|+-+++.||+-. ..- ++-|.+=++.=+.||+|+||+|.+|++.+
T Consensus 60 ~H~H~~~~E~~yVLe~~G~g-----~v~idge~~~l~~GD~v~IPpg~~H~i~g 108 (157)
T 4h7l_A 60 THYHREHQEIYVVLDHAAHA-----TIELNGQSYPLTKLLAISIPPLVRHRIVG 108 (157)
T ss_dssp CBBCSSCEEEEEEEEECTTC-----EEEETTEEEECCTTEEEEECTTCCEEEES
T ss_pred ceECCCCcEEEEEEecCcEE-----EEEECCEEEEeCCCCEEEECCCCeEeeEC
Confidence 346777888888754 221 34556667888999999999999999986
No 68
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=77.64 E-value=0.78 Score=48.78 Aligned_cols=18 Identities=28% Similarity=0.370 Sum_probs=15.4
Q ss_pred EeecCceEEecCCCcccc
Q 002957 773 EQKLGEAVFIPAGCPHQV 790 (863)
Q Consensus 773 ~Q~lGEAVFIPAGCPHQV 790 (863)
.=++|||+|||||.||=.
T Consensus 161 ~l~pGd~~~ipaGt~HA~ 178 (300)
T 1zx5_A 161 ETTPYDTFVIRPGIPHAG 178 (300)
T ss_dssp ECCTTCEEEECTTCCEEE
T ss_pred ECCCCCEEEcCCCCceEc
Confidence 336899999999999964
No 69
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=76.38 E-value=1.2 Score=40.87 Aligned_cols=31 Identities=23% Similarity=0.328 Sum_probs=25.5
Q ss_pred hCccceEEEeecCceEEecCCCccccccccc
Q 002957 765 FGVEPWTFEQKLGEAVFIPAGCPHQVRNLKS 795 (863)
Q Consensus 765 yGVEpWTF~Q~lGEAVFIPAGCPHQVRNLkS 795 (863)
+-|..-++.=..||+++||+|.||+.+|.-.
T Consensus 91 ~~i~~~~~~l~~Gd~i~i~~~~~H~~~n~~~ 121 (133)
T 1o4t_A 91 FHDNGKDVPIKAGDVCFTDSGESHSIENTGN 121 (133)
T ss_dssp EEETTEEEEEETTEEEEECTTCEEEEECCSS
T ss_pred EEECCEEEEeCCCcEEEECCCCcEEeEECCC
Confidence 3455567777899999999999999999753
No 70
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=75.63 E-value=0.95 Score=45.35 Aligned_cols=56 Identities=11% Similarity=0.063 Sum_probs=40.2
Q ss_pred CcccCCcccCccccCHHHHHHHHHHhCccceEEEeecCceEEecCCCccccccccccceeec
Q 002957 740 EQVIHPIHDQCFYLSSEHKKKLKEEFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAV 801 (863)
Q Consensus 740 ~~v~dPIHDQsfYLd~ehk~rLkEEyGVEpWTF~Q~lGEAVFIPAGCPHQVRNLkSCIKVAl 801 (863)
....|| +++.+|+-.--- ++.|.+=++.=..||.++||||.||-++|+..|+=+..
T Consensus 51 ~~h~h~-~~~~~~Vl~G~~-----~~~i~~~~~~l~~Gd~~~~p~~~~H~~~a~~~~~~l~i 106 (227)
T 3rns_A 51 TAEAML-GNRYYYCFNGNG-----EIFIENNKKTISNGDFLEITANHNYSIEARDNLKLIEI 106 (227)
T ss_dssp EECSCS-SCEEEEEEESEE-----EEEESSCEEEEETTEEEEECSSCCEEEEESSSEEEEEE
T ss_pred CccccC-CCEEEEEEeCEE-----EEEECCEEEEECCCCEEEECCCCCEEEEECCCcEEEEE
Confidence 345677 788777643221 23455556677889999999999999999998766544
No 71
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=75.43 E-value=1 Score=47.50 Aligned_cols=55 Identities=16% Similarity=0.232 Sum_probs=36.4
Q ss_pred EEEeecCceEEecCCCccccccccccceeeccccCcccHHHHHHHHHHhhcCChhh
Q 002957 771 TFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVDECLRLTKEFRLLPKNH 826 (863)
Q Consensus 771 TF~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~eC~rLTeEfR~LP~~H 826 (863)
++.=..||+++||+|+||+++|.-+--=+.+-+++|.+... +.|++=++.+|.+-
T Consensus 279 ~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~v 333 (361)
T 2vqa_A 279 VSRLQQGDVGYVPKGYGHAIRNSSQKPLDIVVVFNDGDYQS-IDLSTWLASNPSSV 333 (361)
T ss_dssp EEEECTTCEEEECTTCEEEEECCSSSCEEEEEEESSSSCCC-EEHHHHHHTSCHHH
T ss_pred EEEECCCCEEEECCCCeEEeEECCCCCEEEEEEECCCCcce-eeHHHHhhhCCHHH
Confidence 56667899999999999999998543224455555544322 23445566777654
No 72
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=74.94 E-value=0.9 Score=46.31 Aligned_cols=47 Identities=13% Similarity=0.171 Sum_probs=31.7
Q ss_pred CCcccCccccCHHHHHHHHHHhCccceEEEeecCceEEecCCCccccccccc
Q 002957 744 HPIHDQCFYLSSEHKKKLKEEFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKS 795 (863)
Q Consensus 744 dPIHDQsfYLd~ehk~rLkEEyGVEpWTF~Q~lGEAVFIPAGCPHQVRNLkS 795 (863)
|+-.++-+|+-.-.- ++.|..=++.=..||+||||+|+||+.+|.-.
T Consensus 197 H~~~~E~~~Vl~G~~-----~~~i~~~~~~l~~GD~i~~~~~~~H~~~n~g~ 243 (261)
T 1rc6_A 197 THVQEHGAYILSGQG-----VYNLDNNWIPVKKGDYIFMGAYSLQAGYGVGR 243 (261)
T ss_dssp EESSCEEEEEEESEE-----EEESSSCEEEEETTCEEEECSSEEEEEEEC--
T ss_pred CCCceEEEEEEEeEE-----EEEECCEEEEeCCCCEEEECCCCcEEeEeCCC
Confidence 444445556533221 24555667788999999999999999999854
No 73
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=73.64 E-value=1.4 Score=45.54 Aligned_cols=49 Identities=22% Similarity=0.274 Sum_probs=35.5
Q ss_pred hCccceEEEeecCceEEecCCCccccccccccceeeccccCcccHHHHHH
Q 002957 765 FGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVDECLR 814 (863)
Q Consensus 765 yGVEpWTF~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~eC~r 814 (863)
+.|..-++.=..||.|+||+|.||..+|...- -..+.+++|....+-+.
T Consensus 80 ~~~~~~~~~l~~Gd~~~~p~~~~H~~~n~~~~-~~~~~~~~p~~~~~~~~ 128 (337)
T 1y3t_A 80 LTLDGERYLLISGDYANIPAGTPHSYRMQSHR-TRLVSYTMKGNVAHLYS 128 (337)
T ss_dssp EEETTEEEEECTTCEEEECTTCCEEEEECSTT-EEEEEEEETTSSTHHHH
T ss_pred EEECCEEEEECCCCEEEECCCCcEEEEECCCC-eEEEEEECCCCHHHHHH
Confidence 34456677788999999999999999998762 23445566666665443
No 74
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=73.48 E-value=1.7 Score=40.70 Aligned_cols=35 Identities=29% Similarity=0.323 Sum_probs=28.4
Q ss_pred ccceEEEeecCceEEecCCCccccccccccceeec
Q 002957 767 VEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAV 801 (863)
Q Consensus 767 VEpWTF~Q~lGEAVFIPAGCPHQVRNLkSCIKVAl 801 (863)
+.+=++.=+.||+++||+|.||..+|...|.++.+
T Consensus 90 ~~g~~~~l~~GD~i~~p~g~~h~~~~~~~~~~l~v 124 (133)
T 2pyt_A 90 HEGETMIAKAGDVMFIPKGSSIEFGTPTSVRFLYV 124 (133)
T ss_dssp ETTEEEEEETTCEEEECTTCEEEEEEEEEEEEEEE
T ss_pred ECCEEEEECCCcEEEECCCCEEEEEeCCCEEEEEE
Confidence 34556677899999999999999999877766654
No 75
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=73.21 E-value=1.4 Score=44.42 Aligned_cols=48 Identities=23% Similarity=0.147 Sum_probs=34.1
Q ss_pred ccCCcccCccccCHHHHHHHHHHhCccceEEEeecCceEE-ecCCCccccccccc
Q 002957 742 VIHPIHDQCFYLSSEHKKKLKEEFGVEPWTFEQKLGEAVF-IPAGCPHQVRNLKS 795 (863)
Q Consensus 742 v~dPIHDQsfYLd~ehk~rLkEEyGVEpWTF~Q~lGEAVF-IPAGCPHQVRNLkS 795 (863)
..|| +.|-+|+-.--- ++-|..=++.=..||+|| ||+|+||+++|...
T Consensus 50 H~H~-~~e~~~Vl~G~~-----~~~~~~~~~~l~~Gd~i~~ip~~~~H~~~n~~~ 98 (243)
T 3h7j_A 50 HQHK-EVQIGMVVSGEL-----MMTVGDVTRKMTALESAYIAPPHVPHGARNDTD 98 (243)
T ss_dssp ECCS-SEEEEEEEESEE-----EEEETTEEEEEETTTCEEEECTTCCEEEEECSS
T ss_pred EECC-CcEEEEEEEeEE-----EEEECCEEEEECCCCEEEEcCCCCcEeeEeCCC
Confidence 3566 667666643321 233445566778999997 99999999999877
No 76
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=72.79 E-value=1.2 Score=49.09 Aligned_cols=15 Identities=47% Similarity=0.738 Sum_probs=14.3
Q ss_pred ecCceEEecCCCccc
Q 002957 775 KLGEAVFIPAGCPHQ 789 (863)
Q Consensus 775 ~lGEAVFIPAGCPHQ 789 (863)
++|||+|||||.||=
T Consensus 245 ~pGd~~fipAG~~HA 259 (394)
T 2wfp_A 245 NPGEAMFLFAETPHA 259 (394)
T ss_dssp CTTCEEEECTTCCEE
T ss_pred CCCCEEEcCCCCceE
Confidence 789999999999996
No 77
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=72.16 E-value=1.3 Score=45.55 Aligned_cols=31 Identities=13% Similarity=0.314 Sum_probs=26.2
Q ss_pred hCccceEEEeecCceEEecCCCccccccccc
Q 002957 765 FGVEPWTFEQKLGEAVFIPAGCPHQVRNLKS 795 (863)
Q Consensus 765 yGVEpWTF~Q~lGEAVFIPAGCPHQVRNLkS 795 (863)
+.|..-++.=..||+|+||||+||+.+|.-.
T Consensus 216 ~~i~~~~~~l~~GD~i~i~~~~~H~~~n~~~ 246 (274)
T 1sef_A 216 YNLDNEWYPVEKGDYIFMSAYVPQAAYAVGR 246 (274)
T ss_dssp EEETTEEEEEETTCEEEECTTCCEEEEEECS
T ss_pred EEECCEEEEECCCCEEEECCCCCEEEEeCCC
Confidence 4555667788999999999999999999755
No 78
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=71.97 E-value=1.3 Score=47.47 Aligned_cols=70 Identities=16% Similarity=0.171 Sum_probs=50.1
Q ss_pred ccCCcccCccccCHHHHHHHHHHhCccc-----eEEEeecCceEEecCCCccccccccccceeeccccCcccHHHHHHHH
Q 002957 742 VIHPIHDQCFYLSSEHKKKLKEEFGVEP-----WTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVDECLRLT 816 (863)
Q Consensus 742 v~dPIHDQsfYLd~ehk~rLkEEyGVEp-----WTF~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~eC~rLT 816 (863)
..|+-.++.||+-.-.- ++-|.. -++.=..||.|+||+|.||..+|.-.-. ..+-.++|....+-++-.
T Consensus 66 H~H~~~~E~~~Vl~G~~-----~~~v~~~~g~~~~~~L~~GD~v~ip~g~~H~~~n~~~~~-~~l~v~~p~~~~~~f~~l 139 (350)
T 1juh_A 66 HIHQKHYENFYCNKGSF-----QLWAQSGNETQQTRVLSSGDYGSVPRNVTHTFQIQDPDT-EMTGVIVPGGFEDLFYYL 139 (350)
T ss_dssp EECSSCEEEEEEEESEE-----EEEEEETTSCCEEEEEETTCEEEECTTEEEEEEECSTTE-EEEEEEESSCTTHHHHHH
T ss_pred ccCCCceEEEEEEEEEE-----EEEECCcCCceEEEEECCCCEEEECCCCcEEEEeCCCCC-EEEEEEcCccHHHHHHHh
Confidence 45666667777643321 244555 7788899999999999999999986554 667788888877665543
Q ss_pred H
Q 002957 817 K 817 (863)
Q Consensus 817 e 817 (863)
.
T Consensus 140 ~ 140 (350)
T 1juh_A 140 G 140 (350)
T ss_dssp S
T ss_pred c
Confidence 3
No 79
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=70.68 E-value=1.4 Score=49.28 Aligned_cols=16 Identities=44% Similarity=0.675 Sum_probs=14.6
Q ss_pred eecCceEEecCCCccc
Q 002957 774 QKLGEAVFIPAGCPHQ 789 (863)
Q Consensus 774 Q~lGEAVFIPAGCPHQ 789 (863)
=++|||+|||||.||=
T Consensus 270 L~pGea~flpAg~~HA 285 (440)
T 1pmi_A 270 LNKGEAMFLQAKDPHA 285 (440)
T ss_dssp ECTTCEEEECTTCCEE
T ss_pred cCCCCEEecCCCCccc
Confidence 4689999999999996
No 80
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=70.32 E-value=1.6 Score=46.57 Aligned_cols=27 Identities=26% Similarity=0.487 Sum_probs=23.0
Q ss_pred ceEEEeecCceEEecCCCccccccccc
Q 002957 769 PWTFEQKLGEAVFIPAGCPHQVRNLKS 795 (863)
Q Consensus 769 pWTF~Q~lGEAVFIPAGCPHQVRNLkS 795 (863)
.-++.=..||+++||+|+||+++|.-+
T Consensus 300 ~~~~~l~~GD~~~ip~~~~H~~~n~~~ 326 (385)
T 1j58_A 300 ARTFNYQAGDVGYVPFAMGHYVENIGD 326 (385)
T ss_dssp EEEEEEESSCEEEECTTCBEEEEECSS
T ss_pred EEEEEEcCCCEEEECCCCeEEEEECCC
Confidence 346667799999999999999999854
No 81
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=70.25 E-value=1.5 Score=46.32 Aligned_cols=29 Identities=10% Similarity=0.264 Sum_probs=22.8
Q ss_pred hCccceEEEeecCceEEecCCCccccccc
Q 002957 765 FGVEPWTFEQKLGEAVFIPAGCPHQVRNL 793 (863)
Q Consensus 765 yGVEpWTF~Q~lGEAVFIPAGCPHQVRNL 793 (863)
|-+..=.+.=+.||++|||+||||+..|.
T Consensus 220 y~l~~~~~~V~~GD~i~~~~~~~h~~~n~ 248 (266)
T 4e2q_A 220 YRLGDNWYPVQAGDVIWMAPFVPQWYAAL 248 (266)
T ss_dssp EEETTEEEEEETTCEEEECTTCCEEEEEE
T ss_pred EEECCEEEEecCCCEEEECCCCcEEEEeC
Confidence 34444455567899999999999999986
No 82
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=69.31 E-value=2.9 Score=47.75 Aligned_cols=42 Identities=14% Similarity=0.239 Sum_probs=34.6
Q ss_pred hCccceEEEeecCceEEecCCCccccccccc--cceeeccccCc
Q 002957 765 FGVEPWTFEQKLGEAVFIPAGCPHQVRNLKS--CTKVAVDFVSP 806 (863)
Q Consensus 765 yGVEpWTF~Q~lGEAVFIPAGCPHQVRNLkS--CIKVAlDFVSP 806 (863)
.+-..+.++-.+||..|||.|.+|||+++-. ++.++.-+-.|
T Consensus 223 ~~~p~~e~~L~pGDvLYiP~g~~H~~~s~~~~~SlhlTi~~~~~ 266 (489)
T 4diq_A 223 LGEPVLQTVLEPGDLLYFPRGFIHQAECQDGVHSLHLTLSTYQR 266 (489)
T ss_dssp CCCCSEEEEECTTCEEEECTTCEEEEEBCSSCCEEEEEEEECTT
T ss_pred ccCcceEEEECCCCEEEECCCCceEEEecCCCceEEEeecccCc
Confidence 3567789999999999999999999999954 67777666544
No 83
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=68.93 E-value=2.9 Score=46.89 Aligned_cols=31 Identities=26% Similarity=0.430 Sum_probs=27.8
Q ss_pred HhCccceEEEeecCceEEecCCCcccccccc
Q 002957 764 EFGVEPWTFEQKLGEAVFIPAGCPHQVRNLK 794 (863)
Q Consensus 764 EyGVEpWTF~Q~lGEAVFIPAGCPHQVRNLk 794 (863)
++|-..+.++=.+||+.|||+|.+|+|+++.
T Consensus 193 ~~~~~~~~~~L~pGD~LYiP~g~~H~~~s~~ 223 (442)
T 2xdv_A 193 RIGRPVHEFMLKPGDLLYFPRGTIHQADTPA 223 (442)
T ss_dssp TSCSCSEEEEECTTCEEEECTTCEEEEECCS
T ss_pred hcCCcceEEEECCCcEEEECCCceEEEEecC
Confidence 3566778999999999999999999999986
No 84
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=68.82 E-value=2.5 Score=45.67 Aligned_cols=40 Identities=15% Similarity=0.027 Sum_probs=30.4
Q ss_pred ccceEEEeecCceEEecCCCccccccccccceeeccccCc
Q 002957 767 VEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSP 806 (863)
Q Consensus 767 VEpWTF~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSP 806 (863)
|.+-++.=..||+|+||+|.+|+.+|.-.---+-++|..|
T Consensus 136 v~g~~~~l~~GD~~~iP~g~~H~~~n~~~~~~~~l~v~d~ 175 (354)
T 2d40_A 136 VDGERTPMNEGDFILTPQWRWHDHGNPGDEPVIWLDGLDL 175 (354)
T ss_dssp ETTEEEECCTTCEEEECTTSCEEEECCSSSCEEEEEEECH
T ss_pred ECCEEEEEcCCCEEEECCCCcEEeEeCCCCCEEEEEEECc
Confidence 4555788889999999999999999985432244566654
No 85
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=68.15 E-value=2.5 Score=41.64 Aligned_cols=29 Identities=24% Similarity=0.115 Sum_probs=24.8
Q ss_pred ccceEEEeecCceEEecCCCccccccccc
Q 002957 767 VEPWTFEQKLGEAVFIPAGCPHQVRNLKS 795 (863)
Q Consensus 767 VEpWTF~Q~lGEAVFIPAGCPHQVRNLkS 795 (863)
|..=+|.=..||.++||||.||..+|.-+
T Consensus 125 l~g~~~~L~~Gds~~iP~g~~H~~~N~~d 153 (166)
T 2vpv_A 125 VCKNKFLSVKGSTFQIPAFNEYAIANRGN 153 (166)
T ss_dssp ETTEEEEEETTCEEEECTTCEEEEEECSS
T ss_pred ECCEEEEEcCCCEEEECCCCCEEEEECCC
Confidence 44557777899999999999999999765
No 86
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=65.42 E-value=2.1 Score=44.54 Aligned_cols=31 Identities=26% Similarity=0.405 Sum_probs=25.5
Q ss_pred hCccceEEEeecCceEEecCCCccccccccc
Q 002957 765 FGVEPWTFEQKLGEAVFIPAGCPHQVRNLKS 795 (863)
Q Consensus 765 yGVEpWTF~Q~lGEAVFIPAGCPHQVRNLkS 795 (863)
+.|..=++.=..||+++||||.||+++|.-+
T Consensus 103 v~v~g~~~~L~~GD~i~ip~~~~H~~~N~g~ 133 (278)
T 1sq4_A 103 LTLQGQVHAMQPGGYAFIPPGADYKVRNTTG 133 (278)
T ss_dssp EEESSCEEEECTTEEEEECTTCCEEEECCSS
T ss_pred EEECCEEEEECCCCEEEECCCCcEEEEECCC
Confidence 3445567788899999999999999999843
No 87
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=64.53 E-value=2.3 Score=43.19 Aligned_cols=32 Identities=19% Similarity=0.393 Sum_probs=25.9
Q ss_pred HhCccceEEEeecCceEEecCCCccccccccc
Q 002957 764 EFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKS 795 (863)
Q Consensus 764 EyGVEpWTF~Q~lGEAVFIPAGCPHQVRNLkS 795 (863)
+|-+..=++.=..||.+|+||||||+.+|.-.
T Consensus 198 ~~~~~~~~~~l~~GD~~~~~~~~pH~~~n~g~ 229 (246)
T 1sfn_A 198 LYKLEENYYPVTAGDIIWMGAHCPQWYGALGR 229 (246)
T ss_dssp EEEETTEEEEEETTCEEEECTTCCEEEEEESS
T ss_pred EEEECCEEEEcCCCCEEEECCCCCEEEEcCCC
Confidence 35566666677899999999999999999643
No 88
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=63.33 E-value=3.3 Score=45.54 Aligned_cols=28 Identities=21% Similarity=0.232 Sum_probs=24.8
Q ss_pred ccceEEEeecCceEEecCCCcccccccc
Q 002957 767 VEPWTFEQKLGEAVFIPAGCPHQVRNLK 794 (863)
Q Consensus 767 VEpWTF~Q~lGEAVFIPAGCPHQVRNLk 794 (863)
|.+=++.=..||+|+||+|+.|++.|--
T Consensus 139 vdG~~~~~~~GD~v~iP~g~~H~~~N~g 166 (368)
T 3nw4_A 139 VNGDPVRMSRGDLLLTPGWCFHGHMNDT 166 (368)
T ss_dssp ETTEEEEEETTCEEEECTTCCEEEEECS
T ss_pred ECCEEEEEeCCCEEEECCCCcEEeEeCC
Confidence 5666888999999999999999999963
No 89
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=63.27 E-value=3.2 Score=45.94 Aligned_cols=28 Identities=21% Similarity=0.151 Sum_probs=25.4
Q ss_pred ccceEEEeecCceEEecCCCcccccccc
Q 002957 767 VEPWTFEQKLGEAVFIPAGCPHQVRNLK 794 (863)
Q Consensus 767 VEpWTF~Q~lGEAVFIPAGCPHQVRNLk 794 (863)
|.+-+|.-..||+||||+|.+||+.|.-
T Consensus 329 V~ge~~~~~~GD~~~iP~g~~H~~~N~g 356 (394)
T 3bu7_A 329 VGGKRFDWSEHDIFCVPAWTWHEHCNTQ 356 (394)
T ss_dssp ETTEEEEECTTCEEEECTTCCEEEEECC
T ss_pred ECCEEEEEeCCCEEEECCCCeEEeEeCC
Confidence 5678899999999999999999999974
No 90
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=62.40 E-value=2.4 Score=44.77 Aligned_cols=25 Identities=16% Similarity=0.312 Sum_probs=22.2
Q ss_pred eEEEeecCceEEecCCCcccccccc
Q 002957 770 WTFEQKLGEAVFIPAGCPHQVRNLK 794 (863)
Q Consensus 770 WTF~Q~lGEAVFIPAGCPHQVRNLk 794 (863)
-++.=..||+++||+|.||..+|.-
T Consensus 96 ~~~~l~~GD~~~ip~g~~H~~~n~~ 120 (361)
T 2vqa_A 96 EIADVDKGGLWYFPRGWGHSIEGIG 120 (361)
T ss_dssp EEEEEETTEEEEECTTCEEEEEECS
T ss_pred EEEEEcCCCEEEECCCCeEEEEeCC
Confidence 4567778999999999999999986
No 91
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=62.26 E-value=3.6 Score=39.96 Aligned_cols=27 Identities=30% Similarity=0.395 Sum_probs=23.0
Q ss_pred ceEEEeecCceEEecCCCccccccccc
Q 002957 769 PWTFEQKLGEAVFIPAGCPHQVRNLKS 795 (863)
Q Consensus 769 pWTF~Q~lGEAVFIPAGCPHQVRNLkS 795 (863)
.-++.=..||+++||+|.||..+|.-+
T Consensus 82 ~~~~~l~~GDv~~~P~g~~H~~~N~g~ 108 (178)
T 1dgw_A 82 RDTYKLDQGDAIKIQAGTPFYLINPDN 108 (178)
T ss_dssp EEEEEEETTEEEEECTTCCEEEEECCS
T ss_pred cEEEEECCCCEEEECCCCeEEEEeCCC
Confidence 346677889999999999999999854
No 92
>2ct7_A Ring finger protein 31; IBR, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.4
Probab=61.46 E-value=4.5 Score=35.34 Aligned_cols=39 Identities=28% Similarity=0.869 Sum_probs=28.5
Q ss_pred ccccCCCCce-ecCCCCcccc----cccccCCCCCcccchhchH
Q 002957 250 ETLCGNDERV-YCNHCATSII----DLHRSCPKCSYELCLTCCK 288 (863)
Q Consensus 250 ~a~~~~DERv-~CD~CkTSI~----D~HRsC~~CsyDLCL~CC~ 288 (863)
+..+..+.++ +|-+|.+.|. .....|+.|++.+|..|-.
T Consensus 16 e~~v~~~~~~~wCP~C~~~~~~~~~~~~v~C~~C~~~FC~~C~~ 59 (86)
T 2ct7_A 16 EGVLMRDPKFLWCAQCSFGFIYEREQLEATCPQCHQTFCVRCKR 59 (86)
T ss_dssp CSCCCSCCCEECCSSSCCCEECCCSCSCEECTTTCCEECSSSCS
T ss_pred HHHHhcCCCEeECcCCCchheecCCCCceEeCCCCCccccccCC
Confidence 3444445544 6999999764 3456899999999999964
No 93
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=60.44 E-value=6.1 Score=39.23 Aligned_cols=37 Identities=14% Similarity=0.104 Sum_probs=26.0
Q ss_pred EEEeecCceEEecCCCccccccccccceeeccccCcc
Q 002957 771 TFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPE 807 (863)
Q Consensus 771 TF~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 807 (863)
++.=..||.|+||||.||...+-..--=+|+.|-+|+
T Consensus 123 ~~~l~~GDli~IP~g~~H~~~~~~~~~~~~ir~F~~~ 159 (179)
T 1zrr_A 123 QVLCEKNDLISVPAHTPHWFDMGSEPNFTAIRIFDNP 159 (179)
T ss_dssp EEECCCSCEEEECTTCCBCCCCSSCSSCEEEEEECCG
T ss_pred EEEECCCCEEEECCCCeEeeecCCCceEEEEEeccCC
Confidence 4556899999999999999887665222344444443
No 94
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=59.31 E-value=3.1 Score=42.23 Aligned_cols=31 Identities=23% Similarity=0.225 Sum_probs=25.1
Q ss_pred CccceEEEeecCceEEecCCCcccccccccc
Q 002957 766 GVEPWTFEQKLGEAVFIPAGCPHQVRNLKSC 796 (863)
Q Consensus 766 GVEpWTF~Q~lGEAVFIPAGCPHQVRNLkSC 796 (863)
.|..=++.=..||+++||||.||+++|...|
T Consensus 82 ~~~~~~~~l~~Gd~~~~p~~~~H~~~n~~~~ 112 (246)
T 1sfn_A 82 AVGGETRTLREYDYVYLPAGEKHMLTAKTDA 112 (246)
T ss_dssp ECSSCEEEECTTEEEEECTTCCCEEEEEEEE
T ss_pred EECCEEEEECCCCEEEECCCCCEEEEeCCCE
Confidence 3445566778899999999999999998544
No 95
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=57.18 E-value=4.9 Score=39.71 Aligned_cols=35 Identities=14% Similarity=0.092 Sum_probs=26.2
Q ss_pred EEEeecCceEEecCCCccccccccccceeeccccCc
Q 002957 771 TFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSP 806 (863)
Q Consensus 771 TF~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSP 806 (863)
++.=..||++ ||+|.||+.+|.-.---..+-.++|
T Consensus 119 ~~~L~~GDsi-~~~g~~H~~~N~g~~~ar~l~V~~P 153 (172)
T 3es1_A 119 KRTVRQGGII-VQRGTNHLWRNTTDKPCRIAFILIE 153 (172)
T ss_dssp EEEECTTCEE-EECSCCBEEECCSSSCEEEEEEEEE
T ss_pred EEEECCCCEE-EeCCCcEEEEeCCCCCEEEEEEEcC
Confidence 4566899999 9999999999987654444444444
No 96
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=57.07 E-value=4.5 Score=45.95 Aligned_cols=33 Identities=24% Similarity=0.377 Sum_probs=25.3
Q ss_pred eecCceEEecCCCccccccccccceeeccccCc
Q 002957 774 QKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSP 806 (863)
Q Consensus 774 Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSP 806 (863)
=+.||+|+||||.||-..|.-+--=|++-++.+
T Consensus 117 l~~GDvi~iPaG~~h~~~N~g~~~l~~v~~~d~ 149 (493)
T 2d5f_A 117 FNEGDVLVIPPGVPYWTYNTGDEPVVAISLLDT 149 (493)
T ss_dssp EETTEEEEECTTCCEEEEECSSSCEEEEEEECT
T ss_pred ecCCCEEEECCCCcEEEEeCCCCCEEEEEEecC
Confidence 367999999999999999997754455444443
No 97
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=54.69 E-value=3.8 Score=42.62 Aligned_cols=31 Identities=16% Similarity=0.276 Sum_probs=25.5
Q ss_pred hCccceEEEeecCceEEecCCCccccccccc
Q 002957 765 FGVEPWTFEQKLGEAVFIPAGCPHQVRNLKS 795 (863)
Q Consensus 765 yGVEpWTF~Q~lGEAVFIPAGCPHQVRNLkS 795 (863)
|-+..=++.=..||.+|+|+||||+.+|.-.
T Consensus 225 ~~~~~~~~~v~~GD~~~~~~~~~h~~~n~g~ 255 (278)
T 1sq4_A 225 YRLNQDWVEVEAGDFMWLRAFCPQACYSGGP 255 (278)
T ss_dssp EEETTEEEEEETTCEEEEEESCCEEEECCSS
T ss_pred EEECCEEEEeCCCCEEEECCCCCEEEEcCCC
Confidence 5555666777899999999999999999654
No 98
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=54.24 E-value=4.2 Score=41.93 Aligned_cols=44 Identities=20% Similarity=0.369 Sum_probs=30.9
Q ss_pred cCCcccCccccCHHHHHHHHH--HhCcc-ceEEEeecCceEEecCCCcccccccc
Q 002957 743 IHPIHDQCFYLSSEHKKKLKE--EFGVE-PWTFEQKLGEAVFIPAGCPHQVRNLK 794 (863)
Q Consensus 743 ~dPIHDQsfYLd~ehk~rLkE--EyGVE-pWTF~Q~lGEAVFIPAGCPHQVRNLk 794 (863)
.|| +.|.+|+ |.- ||.|. .=++.=..||.||||+|.||.+|+..
T Consensus 149 sHp-~EEiy~V-------LsG~~e~~v~~g~~~~l~pGd~v~ipsgv~Ha~rt~d 195 (217)
T 4b29_A 149 EHL-PEELYSV-------VSGRALFHLRNAPDLMLEPGQTRFHPANAPHAMTTLT 195 (217)
T ss_dssp ECS-SEEEEEE-------EEECEEEEETTSCCEEECTTCEEEECTTCCEEEECCS
T ss_pred CCC-CceEEEE-------EeCCEEEEECCCCEEecCCCCEEEcCCCCceeEEECC
Confidence 566 4665554 222 36555 45566789999999999999999743
No 99
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=54.08 E-value=4.8 Score=45.40 Aligned_cols=35 Identities=26% Similarity=0.415 Sum_probs=26.1
Q ss_pred eecCceEEecCCCccccccccccceeeccccCccc
Q 002957 774 QKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPEN 808 (863)
Q Consensus 774 Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEn 808 (863)
=+.||+|+||||.||-..|.-+--=+++-++++-|
T Consensus 131 l~~GDv~~iPaG~~H~~~N~g~~~l~~l~~~d~~n 165 (459)
T 2e9q_A 131 FREGDLLVVPAGVSHWMYNRGQSDLVLIVFADTRN 165 (459)
T ss_dssp EETTEEEEECTTCCEEEEECSSSCEEEEEEEESSS
T ss_pred ecCCCEEEECCCCCEEEEeCCCCCEEEEEEecCCC
Confidence 35799999999999999999865555554444433
No 100
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=53.60 E-value=4.7 Score=41.48 Aligned_cols=31 Identities=13% Similarity=0.079 Sum_probs=25.0
Q ss_pred hCccceEEEeecCceEEecCCCccccccccc
Q 002957 765 FGVEPWTFEQKLGEAVFIPAGCPHQVRNLKS 795 (863)
Q Consensus 765 yGVEpWTF~Q~lGEAVFIPAGCPHQVRNLkS 795 (863)
..|..=++.=..||++++|||.||+.+|.-+
T Consensus 97 ~~~~~~~~~L~~GD~~~~~~~~~H~~~N~~~ 127 (274)
T 1sef_A 97 VSDGQETHELEAGGYAYFTPEMKMYLANAQE 127 (274)
T ss_dssp EECSSCEEEEETTEEEEECTTSCCEEEESSS
T ss_pred EEECCEEEEECCCCEEEECCCCCEEEEeCCC
Confidence 3344556777899999999999999999854
No 101
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=53.39 E-value=6 Score=40.21 Aligned_cols=30 Identities=23% Similarity=0.295 Sum_probs=24.7
Q ss_pred CccceEEEeecCceEEecCCCccccccccc
Q 002957 766 GVEPWTFEQKLGEAVFIPAGCPHQVRNLKS 795 (863)
Q Consensus 766 GVEpWTF~Q~lGEAVFIPAGCPHQVRNLkS 795 (863)
-|..=++.=..||++++|||.||+.+|.-+
T Consensus 95 ~~~~~~~~L~~Gd~~~~~~~~~H~~~N~~~ 124 (261)
T 1rc6_A 95 KAEGKTFALSEGGYLYCPPGSLMTFVNAQA 124 (261)
T ss_dssp EETTEEEEEETTEEEEECTTCCCEEEECSS
T ss_pred EECCEEEEECCCCEEEECCCCCEEEEeCCC
Confidence 344556777899999999999999999844
No 102
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=53.12 E-value=4.3 Score=42.74 Aligned_cols=25 Identities=12% Similarity=0.312 Sum_probs=21.2
Q ss_pred EEEeecCceEEecCCCccccccccc
Q 002957 771 TFEQKLGEAVFIPAGCPHQVRNLKS 795 (863)
Q Consensus 771 TF~Q~lGEAVFIPAGCPHQVRNLkS 795 (863)
++.=..||++++|||.|||++|-..
T Consensus 110 ~~~L~~Gds~y~p~~~~H~~~N~~~ 134 (266)
T 4e2q_A 110 SKKLTVDSYAYLPPNFHHSLDCVES 134 (266)
T ss_dssp CEEECTTEEEEECTTCCCEEEESSC
T ss_pred EEEEcCCCEEEECCCCCEEEEeCCC
Confidence 4556789999999999999999543
No 103
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=52.67 E-value=8.8 Score=38.68 Aligned_cols=37 Identities=19% Similarity=0.229 Sum_probs=27.8
Q ss_pred EEEeecCceEEecCCCccccccccccceeeccccCcc
Q 002957 771 TFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPE 807 (863)
Q Consensus 771 TF~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 807 (863)
++.=..||.|+||||.||...+-.+--=+|+.|-+++
T Consensus 128 ~i~v~~GDlIiIPaG~~H~f~~~~~~~~~airlF~~~ 164 (191)
T 1vr3_A 128 RISMEKGDMITLPAGIYHRFTLDEKNYVKAMRLFVGE 164 (191)
T ss_dssp EEEEETTEEEEECTTCCEEEEECTTCCEEEEEEESSS
T ss_pred EEEECCCCEEEECcCCcCCcccCCCCCEEEEEEECCC
Confidence 6777899999999999999887655333456555555
No 104
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=50.86 E-value=7.3 Score=42.02 Aligned_cols=27 Identities=11% Similarity=0.095 Sum_probs=24.4
Q ss_pred ccceEEEeecCceEEecCCCccccccc
Q 002957 767 VEPWTFEQKLGEAVFIPAGCPHQVRNL 793 (863)
Q Consensus 767 VEpWTF~Q~lGEAVFIPAGCPHQVRNL 793 (863)
|.+-+|.=..||+++||+|++||++|-
T Consensus 303 v~~~~~~~~~GD~~~vP~~~~H~~~n~ 329 (354)
T 2d40_A 303 IGNETFSFSAKDIFVVPTWHGVSFQTT 329 (354)
T ss_dssp ETTEEEEEETTCEEEECTTCCEEEEEE
T ss_pred ECCEEEEEcCCCEEEECCCCeEEEEeC
Confidence 467888999999999999999999994
No 105
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=50.22 E-value=6.4 Score=45.06 Aligned_cols=34 Identities=24% Similarity=0.374 Sum_probs=26.5
Q ss_pred ecCceEEecCCCccccccccccceeeccccCccc
Q 002957 775 KLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPEN 808 (863)
Q Consensus 775 ~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEn 808 (863)
..||+|+||||.||-..|.-+--=||+-++.+-|
T Consensus 131 ~~GDvi~iPaG~~hw~~N~g~~~l~~v~~~d~~n 164 (510)
T 3c3v_A 131 NEGDLIAVPTGVAFWLYNDHDTDVVAVSLTDTNN 164 (510)
T ss_dssp CTTEEEEECTTCEEEEEECSSSCEEEEEEECTTB
T ss_pred cCCCEEEECCCCCEEEEeCCCCCEEEEEEeCCCC
Confidence 5699999999999999999875555655555544
No 106
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=50.21 E-value=9.9 Score=34.41 Aligned_cols=30 Identities=17% Similarity=0.262 Sum_probs=24.1
Q ss_pred hCccceEEEeecCceEEecCCCcccccccc
Q 002957 765 FGVEPWTFEQKLGEAVFIPAGCPHQVRNLK 794 (863)
Q Consensus 765 yGVEpWTF~Q~lGEAVFIPAGCPHQVRNLk 794 (863)
+-|..=++.=..||++|||+|.+|+.++-.
T Consensus 51 ~~i~~~~~~l~~Gd~~~i~p~~~H~~~~~~ 80 (164)
T 2arc_A 51 VKNQGREFVCRPGDILLFPPGEIHHYGRHP 80 (164)
T ss_dssp EEETTEEEEECTTCEEEECTTCCEEEEECT
T ss_pred EEECCEEEEecCCeEEEEcCCCCEEEEeCC
Confidence 345555667789999999999999988764
No 107
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=48.11 E-value=8.2 Score=42.77 Aligned_cols=27 Identities=22% Similarity=0.187 Sum_probs=24.4
Q ss_pred CccceEEEeecCceEEecCCCcccccc
Q 002957 766 GVEPWTFEQKLGEAVFIPAGCPHQVRN 792 (863)
Q Consensus 766 GVEpWTF~Q~lGEAVFIPAGCPHQVRN 792 (863)
-|.+=++.-..||+|+||+|..|+++|
T Consensus 158 ~v~G~~~~~~~GD~i~~P~g~~H~~~N 184 (394)
T 3bu7_A 158 IVDGHKVELGANDFVLTPNGTWHEHGI 184 (394)
T ss_dssp EETTEEEEECTTCEEEECTTCCEEEEE
T ss_pred EECCEEEEEcCCCEEEECcCCCEEEEc
Confidence 455668999999999999999999999
No 108
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=47.90 E-value=7.3 Score=44.06 Aligned_cols=30 Identities=23% Similarity=0.405 Sum_probs=23.2
Q ss_pred EEeecCceEEecCCCccccccccccceeec
Q 002957 772 FEQKLGEAVFIPAGCPHQVRNLKSCTKVAV 801 (863)
Q Consensus 772 F~Q~lGEAVFIPAGCPHQVRNLkSCIKVAl 801 (863)
..=+.||+|+||||.||-..|.-+--=|++
T Consensus 115 ~~l~~GDvi~iPaG~~h~~~N~G~~~l~~i 144 (476)
T 1fxz_A 115 YNFREGDLIAVPTGVAWWMYNNEDTPVVAV 144 (476)
T ss_dssp EEECTTEEEEECTTCEEEEEECSSSCEEEE
T ss_pred EEEeCCCEEEECCCCcEEEEeCCCCCEEEE
Confidence 344679999999999999999975433443
No 109
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=45.78 E-value=9.7 Score=37.23 Aligned_cols=33 Identities=15% Similarity=0.217 Sum_probs=28.7
Q ss_pred ecCceEEecCCCcccccccc----ccceee-----ccccCcc
Q 002957 775 KLGEAVFIPAGCPHQVRNLK----SCTKVA-----VDFVSPE 807 (863)
Q Consensus 775 ~lGEAVFIPAGCPHQVRNLk----SCIKVA-----lDFVSPE 807 (863)
..||.+++|+|.+|++.+.. -||-++ +-|+.|.
T Consensus 85 ~aGd~~~~P~g~~H~~~a~~~~~~gci~l~v~~GpL~~~~~~ 126 (165)
T 3cjx_A 85 TAGCYLYEPGGSIHQFNTPRDNEGQTEVIFMLSGCNVNFTQD 126 (165)
T ss_dssp ETTEEEEECTTCEECEECCTTCSSCEEEEEEEESCEEEECTT
T ss_pred CCCeEEEeCCCCceeeEeCCCCCCCcEEEEEEeccceecCCC
Confidence 68999999999999999998 897777 6777774
No 110
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=44.17 E-value=8.5 Score=43.12 Aligned_cols=27 Identities=30% Similarity=0.377 Sum_probs=23.5
Q ss_pred eEEEeecCceEEecCCCcccccccc-cc
Q 002957 770 WTFEQKLGEAVFIPAGCPHQVRNLK-SC 796 (863)
Q Consensus 770 WTF~Q~lGEAVFIPAGCPHQVRNLk-SC 796 (863)
.++.=+.||.++||+|.+|.+.|.- ++
T Consensus 128 ~~~~l~~GDv~~~P~G~~H~~~N~g~~~ 155 (445)
T 2cav_A 128 DTYKLDQGDAIKIQAGTPFYLINPDNNQ 155 (445)
T ss_dssp EEEEEETTEEEEECTTCCEEEEECCSSC
T ss_pred EEEEecCCCEEEECCCCcEEEEECCCCC
Confidence 4677788999999999999999996 44
No 111
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=43.08 E-value=9.8 Score=37.96 Aligned_cols=41 Identities=22% Similarity=0.308 Sum_probs=31.8
Q ss_pred ceE-EEeecCceEEecCCCccccccccccceeeccccCcccHHH
Q 002957 769 PWT-FEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVDE 811 (863)
Q Consensus 769 pWT-F~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~e 811 (863)
+|+ ++..+||.|.||.|.+|...|.... |.++=|||-|-++
T Consensus 117 a~~~i~L~pGesvtIppg~~H~f~ageeg--vli~EvSt~~dDe 158 (175)
T 2y0o_A 117 VWHEIELEPGGQYTIPPNTKHWFQAGEEG--AVVTEMSSTSTDK 158 (175)
T ss_dssp CCEEEEECTTCEEEECTTCCEEEEEEEEE--EEEEEEEECCCGG
T ss_pred CCcEEEECCCCEEEECCCCcEEEEeCCCC--EEEEEEeCCCCCC
Confidence 344 5899999999999999999996555 6666677665544
No 112
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=42.55 E-value=8.8 Score=34.09 Aligned_cols=31 Identities=19% Similarity=0.564 Sum_probs=28.5
Q ss_pred ceecCCCCcccccccccCCCCCcccchhchH
Q 002957 258 RVYCNHCATSIIDLHRSCPKCSYELCLTCCK 288 (863)
Q Consensus 258 Rv~CD~CkTSI~D~HRsC~~CsyDLCL~CC~ 288 (863)
...||.|...+..+.-.|..|.|+|-+.|-.
T Consensus 47 ~~~C~~C~~~~~~~~Y~C~~C~f~lH~~Ca~ 77 (89)
T 1v5n_A 47 VYTCDKCEEEGTIWSYHCDECDFDLHAKCAL 77 (89)
T ss_dssp SCCCTTTSCCCCSCEEECTTTCCCCCHHHHH
T ss_pred CeEeCCCCCcCCCcEEEcCCCCCeEcHHhcC
Confidence 4679999999999999999999999999975
No 113
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=41.98 E-value=18 Score=41.77 Aligned_cols=36 Identities=19% Similarity=0.516 Sum_probs=29.3
Q ss_pred CCCceecCCCCcccccccccCCC--C---CcccchhchHHH
Q 002957 255 NDERVYCNHCATSIIDLHRSCPK--C---SYELCLTCCKEI 290 (863)
Q Consensus 255 ~DERv~CD~CkTSI~D~HRsC~~--C---syDLCL~CC~EL 290 (863)
.+...+|..|++-+|++...|+. | ..++|+.|...-
T Consensus 455 ~~~~~~C~~C~~~lFn~~~v~~~~~~~~~~~v~C~~Ca~~~ 495 (531)
T 3avr_A 455 EEPAHYCSICEVEVFDLLFVTNESNSRKTYIVHCQDCARKT 495 (531)
T ss_dssp TCCCEECTTTCCEECSEEEEEECTTCSSEEEEECHHHHHHH
T ss_pred CCCCeeccccchhheeeEEEEecCCCCCCCCcCChhhhhhc
Confidence 45678999999999999988852 4 247999999974
No 114
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=41.11 E-value=12 Score=42.38 Aligned_cols=85 Identities=11% Similarity=0.035 Sum_probs=46.7
Q ss_pred CcccCCcccCccccCHHHHH-HHHHHhCccceEEEeecCceEEecCCCccccccccccceeeccccCcccHHHHHHH---
Q 002957 740 EQVIHPIHDQCFYLSSEHKK-KLKEEFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVDECLRL--- 815 (863)
Q Consensus 740 ~~v~dPIHDQsfYLd~ehk~-rLkEEyGVEpWTF~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~eC~rL--- 815 (863)
....||-.++.+|+..-.-+ .+-.+-|-+-.+..=..||.++||+|.||.+.|...-+.+..=|+||.. ... .|
T Consensus 352 ~pH~Hp~a~Ei~yVl~G~~~v~v~~~~G~~~~~~~l~~GDv~viP~G~~H~~~ng~~~l~~l~f~~s~~p-~~~-~laG~ 429 (476)
T 1fxz_A 352 VPHYNLNANSIIYALNGRALIQVVNCNGERVFDGELQEGRVLIVPQNFVVAARSQSDNFEYVSFKTNDTP-MIG-TLAGA 429 (476)
T ss_dssp EEEEETTCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEECSTTEEEEEEESSSSC-CEE-ESSST
T ss_pred cceECCCCCEEEEEEeCEEEEEEEecCCCEEeeeEEcCCCEEEECCCCeEEEEeCCCCEEEEEEECCCCC-cee-Eccch
Confidence 34567776776666443211 1111122222333357899999999999999996544444444445522 111 22
Q ss_pred HHHhhcCChhh
Q 002957 816 TKEFRLLPKNH 826 (863)
Q Consensus 816 TeEfR~LP~~H 826 (863)
+.=|+.+|.+-
T Consensus 430 ~s~~~~~p~~V 440 (476)
T 1fxz_A 430 NSLLNALPEEV 440 (476)
T ss_dssp TCTGGGSCHHH
T ss_pred hHHHHhCCHHH
Confidence 34566666543
No 115
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=41.09 E-value=9.7 Score=42.19 Aligned_cols=46 Identities=22% Similarity=0.247 Sum_probs=32.8
Q ss_pred cCCcccCccccCHHHHHHHHHHhCc----cceEEEeecCceEEecCCCccccccc
Q 002957 743 IHPIHDQCFYLSSEHKKKLKEEFGV----EPWTFEQKLGEAVFIPAGCPHQVRNL 793 (863)
Q Consensus 743 ~dPIHDQsfYLd~ehk~rLkEEyGV----EpWTF~Q~lGEAVFIPAGCPHQVRNL 793 (863)
+||=.++.+|+-.-.- .+|| ...++.=..||+++||+|.+|-+.|.
T Consensus 65 Hh~~a~E~~yVl~G~g-----~v~~v~~~~~~~~~l~~GDv~~iP~G~~H~~~N~ 114 (416)
T 1uij_A 65 HHADADFLLFVLSGRA-----ILTLVNNDDRDSYNLHPGDAQRIPAGTTYYLVNP 114 (416)
T ss_dssp EEESEEEEEEEEESCE-----EEEEECSSCEEEEEECTTEEEEECTTCEEEEEEC
T ss_pred ccCCCceEEEEEeeEE-----EEEEEECCCCeEEEecCCCEEEECCCCeEEEEec
Confidence 3665666666644321 1343 45667778999999999999999999
No 116
>1vq8_T 50S ribosomal protein L24P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: b.34.5.1 PDB: 1vq4_T* 1vq5_T* 1vq6_T* 1vq7_T* 1s72_T* 1vq9_T* 1vqk_T* 1vql_T* 1vqm_T* 1vqn_T* 1vqo_T* 1vqp_T* 1yhq_T* 1yi2_T* 1yij_T* 1yit_T* 1yj9_T* 1yjn_T* 1yjw_T* 2otj_T* ...
Probab=38.53 E-value=9.4 Score=36.17 Aligned_cols=42 Identities=21% Similarity=0.362 Sum_probs=36.8
Q ss_pred cCCcccCccccCHHHHHHHHHHhCccceEEEeecCceEEecCCC
Q 002957 743 IHPIHDQCFYLSSEHKKKLKEEFGVEPWTFEQKLGEAVFIPAGC 786 (863)
Q Consensus 743 ~dPIHDQsfYLd~ehk~rLkEEyGVEpWTF~Q~lGEAVFIPAGC 786 (863)
.=|.|...-.+.+.+-+.|+++|||..|.| +-||-|.|=||=
T Consensus 14 ~Ap~h~rrk~msa~LskeLr~ky~vr~~~I--kkGD~V~Vi~G~ 55 (120)
T 1vq8_T 14 RAPLHERHKQVRATLSADLREEYGQRNVRV--NAGDTVEVLRGD 55 (120)
T ss_dssp TCCGGGSGGGGEEEECHHHHHHHTCSEEEC--CTTCEEEECSST
T ss_pred cCCcchhhheeeCcCCHHHHHhhccccccc--cCCCEEEEEecC
Confidence 358899999999999899999999999875 679999999984
No 117
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=37.24 E-value=19 Score=31.24 Aligned_cols=35 Identities=26% Similarity=0.761 Sum_probs=27.7
Q ss_pred CCCCceecCCCCccccccc---ccCCCCCcccchhchHH
Q 002957 254 GNDERVYCNHCATSIIDLH---RSCPKCSYELCLTCCKE 289 (863)
Q Consensus 254 ~~DERv~CD~CkTSI~D~H---RsC~~CsyDLCL~CC~E 289 (863)
+.++...|..|..+ |.+. -+|..|+.-+|-.|+..
T Consensus 15 ~d~~~~~C~~C~~~-Fs~~~RrHHCR~CG~v~C~~Cs~~ 52 (82)
T 2yw8_A 15 KDDEATHCRQCEKE-FSISRRKHHCRNCGHIFCNTCSSN 52 (82)
T ss_dssp CCCCCCBCTTTCCB-CBTTBCCEECTTTCCEECSGGGCE
T ss_pred cCccCCcccCcCCc-ccCccccccCCCCCCEEChHHhCC
Confidence 45667789999876 4444 59999999999999863
No 118
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=35.59 E-value=16 Score=40.72 Aligned_cols=26 Identities=27% Similarity=0.254 Sum_probs=23.1
Q ss_pred ceEEEeecCceEEecCCCcccccccc
Q 002957 769 PWTFEQKLGEAVFIPAGCPHQVRNLK 794 (863)
Q Consensus 769 pWTF~Q~lGEAVFIPAGCPHQVRNLk 794 (863)
+.++.=..||+++||+|.+|.+.|.-
T Consensus 102 ~~~~~l~~GDv~~iP~G~~H~~~N~g 127 (434)
T 2ea7_A 102 RDSYILEQGHAQKIPAGTTFFLVNPD 127 (434)
T ss_dssp EEEEEEETTEEEEECTTCEEEEEECC
T ss_pred CEEEEeCCCCEEEECCCccEEEEeCC
Confidence 45777788999999999999999995
No 119
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=35.50 E-value=16 Score=41.81 Aligned_cols=102 Identities=9% Similarity=-0.010 Sum_probs=55.9
Q ss_pred CCCceEEEeecCCChhHHHHHHHHHHHhhccccCCCCCcccCCcccCccccCHHHHH-HHHHHhCccceEEEeecCceEE
Q 002957 703 ESGGALWDIFRRQDVPKLEAYLRKHFKEFRHVYCSPVEQVIHPIHDQCFYLSSEHKK-KLKEEFGVEPWTFEQKLGEAVF 781 (863)
Q Consensus 703 ~~~GALWDIFRreDvpKLreYL~kh~~EFrh~~~~pv~~v~dPIHDQsfYLd~ehk~-rLkEEyGVEpWTF~Q~lGEAVF 781 (863)
..+|.+.-+... +.|-|.. |.--...+....+.-+....||-.++.+|+..-.-+ .+-.+-|-+-.+..=..||.++
T Consensus 351 ~~gG~v~~~~~~-~fP~L~~-l~is~a~v~L~PG~~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~G~~~~~~~l~~GDv~v 428 (510)
T 3c3v_A 351 PQAGSLKTANEL-NLLILRW-LGLSAEYGNLYRNALFVPHYNTNAHSIIYALRGRAHVQVVDSNGNRVYDEELQEGHVLV 428 (510)
T ss_dssp TTTEEEEEECTT-TSTTHHH-HTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEE
T ss_pred CCCeEEEEeccc-cCccccc-ceEEEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEeCCCCEEEeEEEcCCcEEE
Confidence 457777777664 5777732 110001111112233345678887887776543211 1111122222333357899999
Q ss_pred ecCCCccccccccccceeeccccCc
Q 002957 782 IPAGCPHQVRNLKSCTKVAVDFVSP 806 (863)
Q Consensus 782 IPAGCPHQVRNLkSCIKVAlDFVSP 806 (863)
||+|.||-+.|...-..+..=|+|+
T Consensus 429 iP~G~~H~~~Ng~e~l~~l~f~~s~ 453 (510)
T 3c3v_A 429 VPQNFAVAGKSQSDNFEYVAFKTDS 453 (510)
T ss_dssp ECTTCEEEEEECSSEEEEEEEESSS
T ss_pred ECCCCeEEEEeCCCCEEEEEEECCC
Confidence 9999999999965444444433344
No 120
>3j21_U 50S ribosomal protein L24P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=35.08 E-value=11 Score=35.62 Aligned_cols=40 Identities=25% Similarity=0.462 Sum_probs=35.8
Q ss_pred CCcccCccccCHHHHHHHHHHhCccceEEEeecCceEEecCC
Q 002957 744 HPIHDQCFYLSSEHKKKLKEEFGVEPWTFEQKLGEAVFIPAG 785 (863)
Q Consensus 744 dPIHDQsfYLd~ehk~rLkEEyGVEpWTF~Q~lGEAVFIPAG 785 (863)
=|.|...-++.+.+=+.|+++|||.-|.| +-||-|.|=+|
T Consensus 18 Ap~h~r~k~msa~LSkeLR~ky~~r~~~I--kkGD~V~Vi~G 57 (121)
T 3j21_U 18 APLHVRQKLMSAPLSRELREKYKVRNLPV--RVGDKVRIMRG 57 (121)
T ss_dssp CCTTGGGGGSEEEBCHHHHHHTCCSEEEC--CSSSEEEECSS
T ss_pred CCcchhhhhhcCcCCHHHHHHhCCccccc--ccCCEEEEeec
Confidence 47888888888888889999999999988 57999999998
No 121
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=33.87 E-value=20 Score=38.11 Aligned_cols=25 Identities=24% Similarity=0.549 Sum_probs=22.3
Q ss_pred EEEeecCceEEecCCCccccccccc
Q 002957 771 TFEQKLGEAVFIPAGCPHQVRNLKS 795 (863)
Q Consensus 771 TF~Q~lGEAVFIPAGCPHQVRNLkS 795 (863)
++.=..||.++||+|.+|.++|...
T Consensus 123 ~~~l~~GD~~~ip~g~~H~~~n~~~ 147 (385)
T 1j58_A 123 IDDVGEGDLWYFPSGLPHSIQALEE 147 (385)
T ss_dssp EEEEETTEEEEECTTCCEEEEEEEE
T ss_pred EEEeCCCCEEEECCCCeEEEEECCC
Confidence 5577899999999999999999865
No 122
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=33.18 E-value=16 Score=34.33 Aligned_cols=55 Identities=11% Similarity=-0.013 Sum_probs=34.0
Q ss_pred CcccCCcccCccccCHHHHHHHHHHhCccc--eEEEeecCceEEecCCCccc-cccccccceee
Q 002957 740 EQVIHPIHDQCFYLSSEHKKKLKEEFGVEP--WTFEQKLGEAVFIPAGCPHQ-VRNLKSCTKVA 800 (863)
Q Consensus 740 ~~v~dPIHDQsfYLd~ehk~rLkEEyGVEp--WTF~Q~lGEAVFIPAGCPHQ-VRNLkSCIKVA 800 (863)
....|| +.+.+|+=.--- ..+-|-.+ |++ ..||.+++|+|.+|+ +.+...|+=+.
T Consensus 58 p~H~H~-~~ee~~VL~G~~---~~~~g~~~~~~~~--~~Gd~~~~p~g~~H~p~~~~e~~~~l~ 115 (145)
T 2o1q_A 58 AAHVHV-GPGEYFLTKGKM---DVRGGKAAGGDTA--IAPGYGYESANARHDKTEFPVASEFYM 115 (145)
T ss_dssp CCEEES-SCEEEEEEEEEE---EETTCGGGTSEEE--ESSEEEEECTTCEESCCEEEEEEEEEE
T ss_pred CccCCC-CCEEEEEEEeEE---EEcCCCEecceEe--CCCEEEEECcCCccCCeECCCCeEEEE
Confidence 345666 555555432211 11223333 444 689999999999999 88888886443
No 123
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.02 E-value=23 Score=30.72 Aligned_cols=35 Identities=26% Similarity=0.846 Sum_probs=26.9
Q ss_pred CCCCceecCCCCcc--cccccccCCCCCcccchhchH
Q 002957 254 GNDERVYCNHCATS--IIDLHRSCPKCSYELCLTCCK 288 (863)
Q Consensus 254 ~~DERv~CD~CkTS--I~D~HRsC~~CsyDLCL~CC~ 288 (863)
+.++...|..|..+ ++.---+|..|+.-+|-.|+.
T Consensus 10 pd~~~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~ 46 (84)
T 1x4u_A 10 PTNNFGNCTGCSATFSVLKKRRSCSNCGNSFCSRCCS 46 (84)
T ss_dssp SCCCCSSCSSSCCCCCSSSCCEECSSSCCEECTTTSC
T ss_pred cCCCCCcCcCcCCccccchhhhhhcCCCcEEChhhcC
Confidence 45566789999886 333335899999999999975
No 124
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=31.93 E-value=25 Score=30.60 Aligned_cols=36 Identities=25% Similarity=0.732 Sum_probs=28.5
Q ss_pred cCCCCceecCCCCccccccc---ccCCCCCcccchhchHH
Q 002957 253 CGNDERVYCNHCATSIIDLH---RSCPKCSYELCLTCCKE 289 (863)
Q Consensus 253 ~~~DERv~CD~CkTSI~D~H---RsC~~CsyDLCL~CC~E 289 (863)
.+.++...|..|..+ |.+- -+|..|+.-+|-.|+..
T Consensus 16 ~pd~~~~~C~~C~~~-Fs~~~RrHHCR~CG~v~C~~Cs~~ 54 (84)
T 1z2q_A 16 QEDEDAPACNGCGCV-FTTTVRRHHCRNCGYVLCGDCSRH 54 (84)
T ss_dssp CCTTTCCBCTTTCCB-CCTTSCCEECTTTCCEECTGGGCC
T ss_pred ccCCCCCCCcCcCCc-cccchhcccccCCCcEEChHHhCC
Confidence 345667789999987 4444 58999999999999864
No 125
>2jmo_A Parkin; IBR, E3 ligase, zinc binding domain, RBR; NMR {Homo sapiens}
Probab=30.60 E-value=33 Score=29.64 Aligned_cols=34 Identities=21% Similarity=0.744 Sum_probs=27.7
Q ss_pred CCCceecCC--CCcccc----cccccCC-----CCCcccchhchH
Q 002957 255 NDERVYCNH--CATSII----DLHRSCP-----KCSYELCLTCCK 288 (863)
Q Consensus 255 ~DERv~CD~--CkTSI~----D~HRsC~-----~CsyDLCL~CC~ 288 (863)
.+..++|-. |.+.|. +....|+ +|+|.+|..|-.
T Consensus 22 ~~~~~~CP~p~C~~~v~~~~~~~~v~C~~~~~~~C~~~FC~~C~~ 66 (80)
T 2jmo_A 22 QMGGVLCPRPGCGAGLLPEPDQRKVTCEGGNGLGCGFAFCRECKE 66 (80)
T ss_dssp CCSSCCCCSSSCCCCCCCCSCTTSBCTTSSSTTCCSCCEETTTTE
T ss_pred hCCcEECCCCCCCcccEECCCCCcCCCCCCCCCCCCCeeccccCc
Confidence 345899988 999885 3567898 999999999965
No 126
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=29.95 E-value=26 Score=37.71 Aligned_cols=37 Identities=16% Similarity=0.385 Sum_probs=28.4
Q ss_pred CCCceecCCCCccccccc---ccCCCCCcccchhchHHHh
Q 002957 255 NDERVYCNHCATSIIDLH---RSCPKCSYELCLTCCKEIC 291 (863)
Q Consensus 255 ~DERv~CD~CkTSI~D~H---RsC~~CsyDLCL~CC~ELR 291 (863)
.....+|++|...+.-+- -+|..|++-+|-.|..-+.
T Consensus 354 ~~~~t~C~~C~~~~~g~~~qg~~C~~C~~~~h~~C~~~~~ 393 (406)
T 2vrw_B 354 FEETTSCKACQMLLRGTFYQGYRCYRCRAPAHKECLGRVP 393 (406)
T ss_dssp CSSCCBCTTTCCBCCSSSSCEEEETTTCCEECGGGGGGSC
T ss_pred CCCCCCCccccchhceeCCCCCCCCCCcCccchhhhhhCC
Confidence 345568999999875322 2699999999999988554
No 127
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=29.71 E-value=14 Score=42.07 Aligned_cols=122 Identities=11% Similarity=0.119 Sum_probs=64.5
Q ss_pred CCCceEEEeecCCChhHHHHHHHHHHHhhccccCCCCCcccCCcccCccccCHHHHH-HHHHHhCccceEEEeecCceEE
Q 002957 703 ESGGALWDIFRRQDVPKLEAYLRKHFKEFRHVYCSPVEQVIHPIHDQCFYLSSEHKK-KLKEEFGVEPWTFEQKLGEAVF 781 (863)
Q Consensus 703 ~~~GALWDIFRreDvpKLreYL~kh~~EFrh~~~~pv~~v~dPIHDQsfYLd~ehk~-rLkEEyGVEpWTF~Q~lGEAVF 781 (863)
..+|.+.-+.. .+.|-|... .--...+....+.-.....||=.++.+|+..-.-+ .+-.+.|-+-.+..=..||.++
T Consensus 346 ~~gG~v~~~~~-~~~P~L~~l-gls~a~v~l~pG~~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~g~~~~~~~l~~GDv~v 423 (493)
T 2d5f_A 346 PKAGRISTLNS-LTLPALRQF-GLSAQYVVLYRNGIYSPHWNLNANSVIYVTRGKGRVRVVNAQGNAVFDGELRRGQLLV 423 (493)
T ss_dssp TTTEEEEEEST-TTSTTHHHH-TCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEE
T ss_pred CCCeEEEEecc-ccCcccccc-ceEEEEEEccCCceeeeeECCCCCEEEEEEeceEEEEEEcCCCCEEEeEEEcCCCEEE
Confidence 35677777765 467777321 10111111112222345678877787776543211 1111122222233457899999
Q ss_pred ecCCCccccccccccceeeccccCcccHHHHHHHHHHhhcCChhhhc
Q 002957 782 IPAGCPHQVRNLKSCTKVAVDFVSPENVDECLRLTKEFRLLPKNHRA 828 (863)
Q Consensus 782 IPAGCPHQVRNLkSCIKVAlDFVSPEnV~eC~rLTeEfR~LP~~H~a 828 (863)
||+|.||...|...-..+..=|.|+..-..- |+.=|+.+|.+-.+
T Consensus 424 vP~G~~H~~~n~~e~~~~l~~~ts~~p~~~~--l~s~~~~~p~eVla 468 (493)
T 2d5f_A 424 VPQNFVVAEQGGEQGLEYVVFKTHHNAVSSY--IKDVFRAIPSEVLS 468 (493)
T ss_dssp ECTTCEEEEEEEEEEEEEEEEESSTTCCEEE--HHHHHHHSCHHHHH
T ss_pred ECCCCeEeeeeCCCCEEEEEEECCCCCccee--HHHHHHhCCHHHHH
Confidence 9999999999976444443333232221111 26667778765543
No 128
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=27.96 E-value=1.2e+02 Score=30.61 Aligned_cols=61 Identities=13% Similarity=0.362 Sum_probs=40.3
Q ss_pred hhhhhhhhhhccccCCcccccccccCCCCc------eecCCCCcc--cccccccCCCCCcccchhchHH
Q 002957 229 TQEIEFEASIQRVHSSKVGVSETLCGNDER------VYCNHCATS--IIDLHRSCPKCSYELCLTCCKE 289 (863)
Q Consensus 229 ~~E~EiEaki~G~~~~e~~i~~a~~~~DER------v~CD~CkTS--I~D~HRsC~~CsyDLCL~CC~E 289 (863)
+.+.--+=|-+|+..-+++-..+.+..... -.|-.|.++ ++.=-.+|.+|+.-+|-.|+..
T Consensus 129 i~~~Y~~Lk~~G~~FP~~~~~damf~~~~~p~W~~~~~C~~C~~~F~~~~RrhHCR~CG~v~C~~Cs~~ 197 (226)
T 3zyq_A 129 VQDTYQIMKVEGHVFPEFKESDAMFAAERAPDWVDAEECHRCRVQFGVMTRKHHCRACGQIFCGKCSSK 197 (226)
T ss_dssp HHHHHHHHHHHTCCCCCCCGGGGCCCCCCCCCCCCCSBCTTTCCBCBTTBCCEECTTTCCEECTTTCCE
T ss_pred HHHHHHHHHhcCCCcccchhHHHhhhcccccccccCCCCcCcCCCCCccccccccCCCcCEeChhhcCC
Confidence 445555556678887666655554432221 268999864 3444468999999999999874
No 129
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=26.50 E-value=32 Score=37.82 Aligned_cols=31 Identities=13% Similarity=0.166 Sum_probs=25.8
Q ss_pred cceEEEeecCceEEecCCCccccccccccce
Q 002957 768 EPWTFEQKLGEAVFIPAGCPHQVRNLKSCTK 798 (863)
Q Consensus 768 EpWTF~Q~lGEAVFIPAGCPHQVRNLkSCIK 798 (863)
.+=+|.=..||++.||+|++||..|...|+=
T Consensus 315 ~~~~~~w~~gD~fvvP~w~~h~~~n~~~a~L 345 (368)
T 3nw4_A 315 NGETTKLEKGDMFVVPSWVPWSLQAETQFDL 345 (368)
T ss_dssp TTEEEEECTTCEEEECTTCCEEEEESSSEEE
T ss_pred CCEEEEecCCCEEEECCCCcEEEEeCCCEEE
Confidence 4456888899999999999999999866543
No 130
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=26.24 E-value=26 Score=39.79 Aligned_cols=32 Identities=16% Similarity=0.171 Sum_probs=22.9
Q ss_pred ecCceEEecCCCccccccccccceeeccccCc
Q 002957 775 KLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSP 806 (863)
Q Consensus 775 ~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSP 806 (863)
+.||+|.||||.||=.-|.-.-==+++-++.|
T Consensus 150 ~~GDvi~iPaG~~~~~~N~g~e~L~~l~~~d~ 181 (466)
T 3kgl_A 150 RTGDTIATHPGVAQWFYNDGNQPLVIVSVLDL 181 (466)
T ss_dssp ETTEEEEECTTCEEEEECCSSSCEEEEEEEES
T ss_pred cCCCEEEECCCCcEEEEeCCCCcEEEEEEEcC
Confidence 56999999999999999986443333333333
No 131
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=25.00 E-value=32 Score=39.00 Aligned_cols=34 Identities=29% Similarity=0.374 Sum_probs=25.3
Q ss_pred ecCceEEecCCCccccccccccceeeccccCccc
Q 002957 775 KLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPEN 808 (863)
Q Consensus 775 ~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEn 808 (863)
+.||+|.||||.+|=.-|--+-==|++-++.|-|
T Consensus 135 ~~GDvi~iPaG~~hw~~N~G~~~lv~v~~~d~~n 168 (465)
T 3qac_A 135 REGDIFAMPAGVSHWAYNNGDQPLVAVILIDTAN 168 (465)
T ss_dssp ETTEEEEECTTCEEEEECCSSSCEEEEEEECTTS
T ss_pred cCCCEEEECCCCeEEEEcCCCCCEEEEEEEcCCC
Confidence 6799999999999999997654445554444443
No 132
>3j20_Y 30S ribosomal protein S27AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=24.60 E-value=32 Score=27.80 Aligned_cols=25 Identities=24% Similarity=0.817 Sum_probs=18.9
Q ss_pred CceecCCCCcccccc----cccCCCCCcc
Q 002957 257 ERVYCNHCATSIIDL----HRSCPKCSYE 281 (863)
Q Consensus 257 ERv~CD~CkTSI~D~----HRsC~~CsyD 281 (863)
.+-+|..|..++|-. -..|++|+|.
T Consensus 18 ~~k~CP~CG~~~fm~~~~~R~~C~kCG~t 46 (50)
T 3j20_Y 18 KNKFCPRCGPGVFMADHGDRWACGKCGYT 46 (50)
T ss_dssp SSEECSSSCSSCEEEECSSEEECSSSCCE
T ss_pred ecccCCCCCCceEEecCCCeEECCCCCCE
Confidence 366899999877655 4479999884
No 133
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=23.97 E-value=36 Score=32.48 Aligned_cols=37 Identities=22% Similarity=0.577 Sum_probs=30.0
Q ss_pred CCceecCCCCccc-c--cccccCCCCCcccchhchHHHhc
Q 002957 256 DERVYCNHCATSI-I--DLHRSCPKCSYELCLTCCKEICE 292 (863)
Q Consensus 256 DERv~CD~CkTSI-~--D~HRsC~~CsyDLCL~CC~ELR~ 292 (863)
+..-.|.+|..+. | +--+-|..|.+.+|-.|+-....
T Consensus 53 ~~~~~C~~C~~~~g~l~~~g~~C~~C~~~VC~~C~~~~~~ 92 (134)
T 1zbd_B 53 DGVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCGVETSN 92 (134)
T ss_dssp CSSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSEEECCC
T ss_pred CCCccccccCCCcccccCCCCCCCCCCcccccccCCccCC
Confidence 4556899999886 3 66789999999999999877643
No 134
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=20.82 E-value=38 Score=31.71 Aligned_cols=36 Identities=19% Similarity=0.613 Sum_probs=27.4
Q ss_pred CCCCceecCCCCcc--cccccccCCCCCcccchhchHH
Q 002957 254 GNDERVYCNHCATS--IIDLHRSCPKCSYELCLTCCKE 289 (863)
Q Consensus 254 ~~DERv~CD~CkTS--I~D~HRsC~~CsyDLCL~CC~E 289 (863)
+.++...|..|..+ ++.-.-+|..|+.-+|-.|+..
T Consensus 65 ~d~~~~~C~~C~~~Fs~~~RrHHCR~CG~vfC~~Cs~~ 102 (125)
T 1joc_A 65 EDNEVQNCMACGKGFSVTVRRHHCRQCGNIFCAECSAK 102 (125)
T ss_dssp CGGGCCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCE
T ss_pred cCCCCCCCcCcCCccccccccccCCCCCeEEChHHhCC
Confidence 44556689999875 3333459999999999999864
No 135
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=20.46 E-value=39 Score=32.59 Aligned_cols=34 Identities=12% Similarity=0.193 Sum_probs=26.8
Q ss_pred EeecCceEEecCCCccccccc----cccceee-----ccccCc
Q 002957 773 EQKLGEAVFIPAGCPHQVRNL----KSCTKVA-----VDFVSP 806 (863)
Q Consensus 773 ~Q~lGEAVFIPAGCPHQVRNL----kSCIKVA-----lDFVSP 806 (863)
.-..||-+++|+|.+|++.+. ..||=.+ +-|+.|
T Consensus 81 ~~~~Gd~~~~P~g~~H~~~~~~~~~e~~~~~~~~~G~l~~~~~ 123 (159)
T 3ebr_A 81 VAHAGSVVYETASTRHTPQSAYAEGPDIITFNIVAGELLYLDD 123 (159)
T ss_dssp CBCTTCEEEECSSEEECEEESSSSSSCEEEEEEEESCEEEECT
T ss_pred EECCCeEEEECCCCcceeEeCCCCCCCEEEEEEecCccEecCC
Confidence 345899999999999999998 6797554 356655
No 136
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=20.39 E-value=46 Score=36.86 Aligned_cols=33 Identities=21% Similarity=0.184 Sum_probs=23.9
Q ss_pred EeecCceEEecCCCccccccccccceeeccccCc
Q 002957 773 EQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSP 806 (863)
Q Consensus 773 ~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSP 806 (863)
.=..||+++||+|.||=..|. +-..+..=|.++
T Consensus 310 ~l~~Gdv~vvP~g~~h~~~n~-~~~~~l~f~~~~ 342 (416)
T 1uij_A 310 ELSEDDVFVIPAAYPFVVNAT-SNLNFLAFGINA 342 (416)
T ss_dssp EEETTCEEEECTTCCEEEEES-SSEEEEEEEETC
T ss_pred EecCCcEEEECCCCeEEEEcC-CCeEEEEEEcCC
Confidence 667899999999999999998 433333333344
Done!