Query 002959
Match_columns 862
No_of_seqs 414 out of 2143
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 08:04:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002959.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002959hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fuu_A Leucine aminopeptidase; 100.0 4.8E-39 1.6E-43 351.0 25.3 253 82-362 20-307 (309)
2 4f9u_A CG32412; alpha/beta hyd 100.0 5.4E-35 1.8E-39 319.1 27.7 260 84-371 8-305 (312)
3 3tc8_A Leucine aminopeptidase; 100.0 1.5E-34 5.3E-39 315.6 28.0 250 81-362 19-308 (309)
4 3gux_A Putative Zn-dependent e 100.0 4.8E-34 1.6E-38 312.3 27.5 249 82-362 22-312 (314)
5 4fai_A CG5976, isoform B; alph 100.0 3.1E-34 1.1E-38 315.9 24.5 252 85-362 36-321 (330)
6 3pb6_X Glutaminyl-peptide cycl 100.0 6.8E-33 2.3E-37 304.9 22.8 262 73-363 23-327 (330)
7 1tkj_A Aminopeptidase, SGAP; d 100.0 3.5E-31 1.2E-35 285.4 27.6 254 83-370 3-282 (284)
8 2afw_A Glutaminyl-peptide cycl 100.0 1.7E-31 5.7E-36 293.9 22.8 268 67-363 9-326 (329)
9 1rtq_A Bacterial leucyl aminop 100.0 1.7E-29 5.8E-34 274.1 24.8 262 82-370 15-293 (299)
10 3kas_A Transferrin receptor pr 100.0 7.9E-30 2.7E-34 301.6 19.6 209 160-373 264-491 (640)
11 3fed_A Glutamate carboxypeptid 100.0 6.9E-29 2.4E-33 296.2 14.9 209 159-372 309-553 (707)
12 3iib_A Peptidase M28; YP_92679 99.9 5.6E-27 1.9E-31 267.9 19.9 199 161-369 234-436 (444)
13 2ek8_A Aminopeptidase; metallo 99.9 1.1E-25 3.8E-30 255.3 22.1 199 161-372 202-408 (421)
14 3k9t_A Putative peptidase; str 99.8 2.4E-19 8.2E-24 199.3 21.3 178 169-367 174-357 (435)
15 4h2k_A Succinyl-diaminopimelat 99.7 1.2E-16 4.1E-21 170.4 18.6 231 87-365 6-268 (269)
16 3t68_A Succinyl-diaminopimelat 99.7 7E-17 2.4E-21 172.1 16.0 232 87-365 6-268 (268)
17 1q7l_A Aminoacylase-1; catalys 99.6 3E-15 1E-19 152.6 16.5 134 83-246 6-161 (198)
18 1vhe_A Aminopeptidase/glucanas 99.6 6.9E-15 2.4E-19 164.0 19.6 226 87-366 7-355 (373)
19 2gre_A Deblocking aminopeptida 99.6 1.2E-14 4E-19 160.7 18.3 224 84-361 3-343 (349)
20 1y0y_A FRV operon protein FRVX 99.6 1.7E-14 5.7E-19 159.7 19.0 220 89-365 8-350 (353)
21 2wyr_A Cobalt-activated peptid 99.6 1.5E-14 5.1E-19 158.5 17.1 215 89-362 4-331 (332)
22 2fvg_A Endoglucanase; TM1049, 99.5 6.6E-14 2.3E-18 154.0 12.9 220 92-366 3-336 (340)
23 2zog_A Cytosolic non-specific 99.5 1.3E-12 4.6E-17 149.5 19.8 157 85-262 18-201 (479)
24 3n5f_A L-carbamoylase, N-carba 99.4 8.4E-13 2.9E-17 148.4 16.8 128 84-245 2-141 (408)
25 1cg2_A Carboxypeptidase G2; me 99.4 1.9E-12 6.5E-17 144.7 15.4 146 86-263 18-181 (393)
26 2pok_A Peptidase, M20/M25/M40 99.4 2.9E-12 1E-16 147.1 14.9 146 86-262 42-211 (481)
27 3ife_A Peptidase T; metallopep 99.3 3.5E-12 1.2E-16 144.6 13.5 140 87-262 27-225 (434)
28 3ct9_A Acetylornithine deacety 99.3 9.3E-12 3.2E-16 137.6 16.0 135 86-262 10-164 (356)
29 3dlj_A Beta-Ala-His dipeptidas 99.3 2E-11 6.9E-16 140.4 19.1 156 86-262 24-208 (485)
30 3pfo_A Putative acetylornithin 99.3 1.1E-11 3.7E-16 140.1 15.7 159 86-263 25-205 (433)
31 2v8h_A Beta-alanine synthase; 99.3 1.5E-11 5.1E-16 141.3 14.3 128 83-245 28-175 (474)
32 3gb0_A Peptidase T; NP_980509. 99.3 1.5E-11 5E-16 136.3 13.6 149 83-263 2-168 (373)
33 3tx8_A Succinyl-diaminopimelat 99.3 2.3E-11 7.9E-16 134.5 14.2 139 87-262 13-167 (369)
34 1z2l_A Allantoate amidohydrola 99.3 2.1E-11 7.3E-16 137.4 14.1 126 86-245 8-145 (423)
35 2rb7_A Peptidase, M20/M25/M40 99.2 2.3E-11 7.8E-16 134.8 12.4 139 85-261 4-164 (364)
36 1vho_A Endoglucanase; structur 99.2 1.8E-10 6.1E-15 126.7 19.3 226 88-366 6-337 (346)
37 3kl9_A PEPA, glutamyl aminopep 99.2 1.5E-10 5.3E-15 128.4 18.8 226 86-364 2-345 (355)
38 1lfw_A PEPV; hydrolase, dipept 99.2 1.4E-10 5E-15 132.3 18.3 127 85-248 12-168 (470)
39 1ylo_A Hypothetical protein SF 99.2 1.8E-10 6.3E-15 126.5 18.2 221 91-365 7-338 (348)
40 1fno_A Peptidase T; metallo pe 99.2 2.8E-11 9.4E-16 136.3 10.8 138 87-262 2-198 (417)
41 1vgy_A Succinyl-diaminopimelat 99.2 6E-11 2E-15 132.5 12.9 142 85-262 4-168 (393)
42 3rza_A Tripeptidase; phosphory 99.2 6.4E-11 2.2E-15 132.5 13.0 153 81-263 18-189 (396)
43 3khx_A Putative dipeptidase sa 99.2 1.2E-10 4E-15 134.5 15.2 137 85-261 32-197 (492)
44 3pfe_A Succinyl-diaminopimelat 99.2 9.7E-11 3.3E-15 134.4 13.9 146 87-262 18-193 (472)
45 3isz_A Succinyl-diaminopimelat 99.1 2.5E-10 8.4E-15 125.9 14.4 139 87-261 3-164 (377)
46 3mru_A Aminoacyl-histidine dip 99.1 1.2E-10 4.1E-15 134.4 12.2 140 82-262 9-175 (490)
47 1xmb_A IAA-amino acid hydrolas 99.1 1.2E-09 4E-14 123.3 17.2 135 87-260 28-176 (418)
48 3cpx_A Aminopeptidase, M42 fam 99.1 1.6E-10 5.5E-15 126.4 9.7 223 89-362 19-320 (321)
49 2f7v_A Aectylcitrulline deacet 99.1 3.6E-10 1.2E-14 125.2 12.4 130 86-262 8-160 (369)
50 2qyv_A XAA-His dipeptidase; YP 99.0 7.9E-10 2.7E-14 127.1 12.4 140 83-263 7-173 (487)
51 1ysj_A Protein YXEP; M20 famil 99.0 2.5E-09 8.6E-14 120.1 15.4 137 86-259 31-181 (404)
52 2vpu_A TET3, 354AA long hypoth 99.0 6E-09 2E-13 115.7 17.1 222 89-365 11-349 (354)
53 3ram_A HMRA protein; two-domai 98.9 5.6E-09 1.9E-13 117.1 12.5 141 86-262 15-158 (394)
54 3io1_A Aminobenzoyl-glutamate 98.7 1.4E-07 4.8E-12 107.4 16.0 159 86-260 13-209 (445)
55 3isx_A Endoglucanase; TM1050, 98.7 1.7E-07 6E-12 103.4 16.1 213 90-360 14-341 (343)
56 2wzn_A TET3, 354AA long hypoth 98.4 5.5E-06 1.9E-10 87.5 17.2 222 90-367 12-351 (354)
57 2ek8_A Aminopeptidase; metallo 92.6 0.13 4.5E-06 57.7 6.4 44 81-125 10-53 (421)
58 3iib_A Peptidase M28; YP_92679 91.9 0.18 6.1E-06 57.2 6.5 42 84-125 18-60 (444)
59 2ijz_A Probable M18-family ami 91.0 0.24 8.3E-06 56.0 6.3 142 194-347 230-412 (428)
60 2glf_A Probable M18-family ami 90.7 0.26 8.8E-06 56.1 6.2 42 196-242 246-287 (450)
61 3fed_A Glutamate carboxypeptid 83.2 1.5 5E-05 52.8 6.9 43 82-125 20-62 (707)
62 3vat_A Dnpep, aspartyl aminope 81.2 2.3 7.9E-05 48.9 7.2 160 195-364 281-487 (496)
63 2glj_A Probable M18-family ami 78.2 0.64 2.2E-05 53.1 1.4 45 195-243 257-301 (461)
64 3kas_A Transferrin receptor pr 76.6 0.8 2.7E-05 54.4 1.7 44 83-126 14-59 (640)
65 1y7e_A Probable M18-family ami 75.4 0.45 1.5E-05 54.3 -0.9 45 196-243 252-296 (458)
66 1q7l_B Aminoacylase-1; catalys 35.9 65 0.0022 27.3 6.0 59 305-367 23-82 (88)
67 2lx0_A Membrane fusion protein 31.6 41 0.0014 23.2 3.0 19 570-588 7-25 (32)
68 2ijz_A Probable M18-family ami 27.1 26 0.0009 39.4 2.4 74 104-192 13-86 (428)
69 2glf_A Probable M18-family ami 26.8 1.3E+02 0.0045 33.9 8.1 66 108-192 32-97 (450)
No 1
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=4.8e-39 Score=350.97 Aligned_cols=253 Identities=19% Similarity=0.208 Sum_probs=197.4
Q ss_pred CCCCHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEEEeccCCCcccccccccCccccccc
Q 002959 82 RGFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSD 161 (862)
Q Consensus 82 ~~fs~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~lg~~~~~~~~ve~d~~~~~~g~~~~~g~~~~~~~~~Y~~ 161 (862)
.+||++||+++|++++++|||+.||++++++++||.++|+++| .+++.|.+.... ....+.+
T Consensus 20 p~f~~~~a~~~l~~l~~fgpR~~gS~~~~~a~~~i~~~l~~~g------~~v~~q~~~~~~------------~~~~~~~ 81 (309)
T 4fuu_A 20 PQFDADSAYLYVKNQVDFGPRVPNTKEHVACGNYLAGKLEAFG------AKVTNQYADLIA------------YDGTLLK 81 (309)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHTT------CEEEEEEEEEEC------------TTSCEEE
T ss_pred CccCHHHHHHHHHHHhCcCCcCCCCHHHHHHHHHHHHHHHHcC------CeeEEEeEEecc------------CCCCcce
Confidence 4799999999999999999999999999999999999999998 356666654321 0111236
Q ss_pred cceEEEEEcCCCCCCCCCCeEEEEeecCccCCC-------------CCCCCChhHHHHHHHHHHHHHhccCCCCccEEEE
Q 002959 162 LNHIVLRILPKYASEAGENAILVSSHIDTVSAG-------------EGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFL 228 (862)
Q Consensus 162 ~~NVi~~i~g~~~~~~~~~~Vll~AH~Dsv~~s-------------pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~Fl 228 (862)
..|||++++|+ .++.|+|+|||||++.+ +||+||++|||+|||++|.|.+ .+++++|+|+
T Consensus 82 ~~Nii~~~~g~-----~~~~i~l~aH~Ds~~~~~~~~~~~~~~~~~~GA~D~aSG~a~lLE~ar~l~~--~~~~~~i~~~ 154 (309)
T 4fuu_A 82 ARNIIGSYKPE-----SKKRIALFAHWDTRPWADNDADEKNHHTPILGANDGASGVGALLEIARLVNQ--QQPELGIDII 154 (309)
T ss_dssp EEEEEEEESTT-----CSSEEEEEEECCCCSCCTTCSSGGGTTSCCCCTTTTHHHHHHHHHHHHHHHH--SCCSSEEEEE
T ss_pred eEEEEEEECCC-----CCceEEEEeecCCCCCCCCccccccccCCcCCcccCchhHHHHHHHHHHHhh--cCCCCceEEE
Confidence 78999999985 34789999999999754 6999999999999999999987 4789999999
Q ss_pred EeCCcCCCC--------------cchHHHHhcCC-ccCCccEEEEeecCcCCCCeeEEEeCC---CHHHHHHHHHHccCC
Q 002959 229 FNTGEEEGL--------------NGAHSFVTQHP-WSTTIRVAVDLEAMGIGGRSALFQAGP---NLWAVENFAAVAKYP 290 (862)
Q Consensus 229 f~~aEE~gl--------------~GS~~fv~~h~-~~~~v~a~iNLD~~G~gG~~~lfq~g~---~~~li~~~~~~a~~p 290 (862)
|+++||.|+ .||+.|++++. +..++.++||+||+|.+++......+. .+.+.+.+.+.++..
T Consensus 155 ~~~~EE~Gl~~~~~~~~~~~~~l~GS~~~~~~~~~~~~~i~~~inlDmvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (309)
T 4fuu_A 155 FLDAEDYGTPQFYEGKHKEEAWCLGSQYWSRNPHVQGYNARFGILLDMVGGENSVFLKEGYSEEFAPDINKKVWKAAKKA 234 (309)
T ss_dssp EECSSSCCCCTTCCSCCCGGGSCHHHHHHHHSCSSTTCCCSEEEEECSCCBTTCCEEECHHHHHHCHHHHHHHHHHHHHT
T ss_pred eecccccCccccccchhhhhhhhcchhHHHhcccccCcceEEEEeeeccCCCCCceEeecCchhhhHHHHHHHHHHHHhc
Confidence 999999995 79999997654 357899999999999988765554322 133444444332221
Q ss_pred CCcccccccccCCCCCCCCchHHHhhhcCCeEEEEeecC----CCCCCCCcCCccCCCChhHHHHHHHHHHHHHHH
Q 002959 291 SGQIIGQDLFASGVFETATDFQVYTEVAGLSGLDFAYTD----KSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQ 362 (862)
Q Consensus 291 ~~~~l~~eif~~g~ips~TD~~~F~~~~GIPgld~a~~~----~~~~YHT~~Dt~d~Id~~sLq~~g~~~l~ll~~ 362 (862)
.... ....+.+. ...+||.+|.+.+|||+++++... ..++|||+.||+|+||+++||++|+++++++.+
T Consensus 235 ~~~~--~~~~~~~~-~~~sDh~~F~~~~GIP~l~~~~~~~~~~~~~~yHT~~Dt~d~id~~~L~~vg~~vl~~ly~ 307 (309)
T 4fuu_A 235 GYGK--TFIDERGD-TITDDHLFINRLARIKTIDIIPNDPETGFPPTWHTIHDNMDHIDKNTLKAVGQTVLEVIYN 307 (309)
T ss_dssp TCTT--TEEEEECC-CCCCHHHHHHHHTCCCEEEECBC----CCCTTTTSTTCSGGGBCHHHHHHHHHHHHHHHHH
T ss_pred CCcc--cccccCCC-CCCCChHHHHhcCCCCEEEEeccCCCCCCCCCCCCcccchhhCCHHHHHHHHHHHHHHHhh
Confidence 1111 01112222 236799999976899999997643 245799999999999999999999999999863
No 2
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=100.00 E-value=5.4e-35 Score=319.06 Aligned_cols=260 Identities=18% Similarity=0.230 Sum_probs=194.2
Q ss_pred CCHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEEEeccCCCcccccccccCccccccccc
Q 002959 84 FSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLN 163 (862)
Q Consensus 84 fs~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~lg~~~~~~~~ve~d~~~~~~g~~~~~g~~~~~~~~~Y~~~~ 163 (862)
-+.....+.|+.| ++||.+||++++++++||.++|+++| .++++|.|..... .....+..
T Consensus 8 d~~~~~~~~l~~i--l~PR~~gs~~~~~~~~~i~~~l~~~g------~~v~~~~f~~~~~------------~~~~~~~~ 67 (312)
T 4f9u_A 8 DDEVHFNRTLDSI--LVPRVVGSRGHQQVREYLVQSLNGLG------FQTEVDEFKQRVP------------VFGELTFA 67 (312)
T ss_dssp CCHHHHHHHHHHH--CSCCCTTSHHHHHHHHHHHHHHHHTT------CEEEEEEEEEEET------------TTEEEEEE
T ss_pred CHHHHHHHHHHHh--cCCCCCCCHHHHHHHHHHHHHHHHCC------CeEEEEeEEEecC------------CCCceeEE
Confidence 3455556667776 47999999999999999999999998 4677776654310 00122678
Q ss_pred eEEEEEcCCCCCCCCCCeEEEEeecCccCC-----CCCCCCChhHHHHHHHHHHHHHhc-----cCCCCccEEEEEeCCc
Q 002959 164 HIVLRILPKYASEAGENAILVSSHIDTVSA-----GEGAGDCSSCVAVMLELARVMSQW-----AHEFKNAVIFLFNTGE 233 (862)
Q Consensus 164 NVi~~i~g~~~~~~~~~~Vll~AH~Dsv~~-----spGA~Dd~sgva~~LE~ar~L~~~-----~~~p~~~I~Flf~~aE 233 (862)
|||++++|+ +++.|+|+|||||++. .+||+||++|||+|||+||.|.+. +.+|+|+|+|+|++||
T Consensus 68 Nii~~~~~~-----~~~~vvl~aHyDs~~~~~~~~~~GA~DnaSGvA~lLElAR~l~~~~~~~~~~~p~~tI~fv~fdaE 142 (312)
T 4f9u_A 68 NVVGTINPQ-----AQNFLALACHYDSKYFPNDPGFVGATDSAVPCAILLNTAKTLGAYLQKEFRNRSDVGLMLIFFDGE 142 (312)
T ss_dssp EEEEEESTT-----SSEEEEEEEECCCCCCTTCTTCCCTTTTHHHHHHHHHHHHHTHHHHTTGGGSCSSEEEEEEEESCC
T ss_pred EEEEEECCC-----CCceEEEEEEEecCCCCCCCCCCCccCCcccHHHHHHHHHHHHHHHHhhccCCCCceEEEEEecCc
Confidence 999999984 4578999999999853 589999999999999999999863 4679999999999999
Q ss_pred CCC--------CcchHHHHhcCCcc-------------CCccEEEEeecCcCCCCeeEEEeCCCHHH----HHH---HHH
Q 002959 234 EEG--------LNGAHSFVTQHPWS-------------TTIRVAVDLEAMGIGGRSALFQAGPNLWA----VEN---FAA 285 (862)
Q Consensus 234 E~g--------l~GS~~fv~~h~~~-------------~~v~a~iNLD~~G~gG~~~lfq~g~~~~l----i~~---~~~ 285 (862)
|.| +.||++|+++|++. .++.+++|+|++|..++..........+. .+. ..+
T Consensus 143 E~G~~~~~~~~L~GS~~~a~~~~~~~~~~~~~~~~~~~~~i~~~inlDmvg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 222 (312)
T 4f9u_A 143 EAFKEWTDADSVYGSKHLAAKLASKRSGSQAQLAPRNIDRIEVLVLLDLIGARNPKFSSFYENTDGLHSSLVQIEKSLRT 222 (312)
T ss_dssp SCSSSCSSSSSCHHHHHHHHHHHHCBC-------CBGGGGEEEEEEEESCCSSSCCEEECCGGGHHHHHHHHHHHHHHHH
T ss_pred cccccCCccccccChHHHHHHHHhhccccccccccccccceeeeeeeeccccCCCCceEEEeccchhhhHHHHHHHHHHH
Confidence 988 89999999876432 46889999999998877642221112222 121 112
Q ss_pred HccCCCCcccccccccCCCCCCCCchHHHhhhcCCeEEEEeecCCCCCCCCcCCccCCCChhHHHHHHHHHHHHHHHHhc
Q 002959 286 VAKYPSGQIIGQDLFASGVFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTAS 365 (862)
Q Consensus 286 ~a~~p~~~~l~~eif~~g~ips~TD~~~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d~Id~~sLq~~g~~~l~ll~~La~ 365 (862)
....+............+ ...+||.+|.+ .|||++++......++|||+.||+|+||+++|+++++.+.+++.+...
T Consensus 223 ~~~~~~~~~~~~~~~~~~--~~~SDH~pF~~-~GIP~l~~~~~~~~~~yHt~~Dt~d~id~~~l~~~~~i~~~fv~e~l~ 299 (312)
T 4f9u_A 223 AGQLEGNNNMFLSRVSGG--LVDDDHRPFLD-ENVPVLHLVATPFPDVWHTPRDNAANLHWPSIRNFNRVFRNFVYQYLK 299 (312)
T ss_dssp TTCSSSSCCCEEEEECSS--CCCCTTHHHHT-TTCCEEEEECSSCCTTTTSTTCSGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hccccccccccccccCCC--CCCCchHHHHH-CCCCEEEEECCCCCCCCCCCccChhhCCHHHHHHHHHHHHHHHHHHHh
Confidence 111111111111111111 24689999998 899999999888788899999999999999999999999999998877
Q ss_pred CCCCCC
Q 002959 366 STSIPK 371 (862)
Q Consensus 366 ~~~l~~ 371 (862)
....|.
T Consensus 300 ~~~~P~ 305 (312)
T 4f9u_A 300 RHTSPV 305 (312)
T ss_dssp HCCSCC
T ss_pred CCCCCC
Confidence 766664
No 3
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=100.00 E-value=1.5e-34 Score=315.64 Aligned_cols=250 Identities=18% Similarity=0.228 Sum_probs=197.8
Q ss_pred CCCCCHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEEEeccCCCcccccccccCcccccc
Q 002959 81 RRGFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYS 160 (862)
Q Consensus 81 ~~~fs~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~lg~~~~~~~~ve~d~~~~~~g~~~~~g~~~~~~~~~Y~ 160 (862)
..+|+++||+++|++|+++++|..||+++.++++||.++|+++| .++++|.+.... .. ..+.
T Consensus 19 ~~~~~~~~~~~~l~~l~~~~~R~~~s~~~~~~~~~l~~~l~~~G------~~v~~~~~~~~~---------~~---g~~~ 80 (309)
T 3tc8_A 19 VPDFNADSAYAYVANQVAFGPRVPNTAAHKACGDYLASELKRFG------AKVYQQEAILTA---------YD---GTKL 80 (309)
T ss_dssp SCCCCHHHHHHHHHHHHHTCCCCTTSHHHHHHHHHHHHHHHHTT------CEEEEEEEEEEC---------TT---SCEE
T ss_pred ccccCHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHHCC------CeEEEEEeeccc---------cC---CCcc
Confidence 46899999999999999999999999999999999999999998 356666554320 00 1133
Q ss_pred ccceEEEEEcCCCCCCCCCCeEEEEeecCccCCC-------------CCCCCChhHHHHHHHHHHHHHhccCCCCccEEE
Q 002959 161 DLNHIVLRILPKYASEAGENAILVSSHIDTVSAG-------------EGAGDCSSCVAVMLELARVMSQWAHEFKNAVIF 227 (862)
Q Consensus 161 ~~~NVi~~i~g~~~~~~~~~~Vll~AH~Dsv~~s-------------pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~F 227 (862)
+..|||++++|+ +++.|+++||+|||+.+ +||.||++|||+|||++|.|.+. +++++|.|
T Consensus 81 ~~~Nvia~~~g~-----~~~~ill~aH~Dsv~~~~~~p~~~~~~~~~~Ga~D~~sGva~~Le~ar~l~~~--~~~~~i~f 153 (309)
T 3tc8_A 81 EARNIIGSFDPE-----NSKRVLLFAHWDSRPYSDHDPDPSKHRTPLDGADDGGSGVGALLEIARQIGQK--APGIGIDI 153 (309)
T ss_dssp EEEEEEEEESTT-----CSSEEEEEEECCCCSCCTTCSSGGGTTSCCCCTTTTHHHHHHHHHHHHHHHHS--CCSSEEEE
T ss_pred cceEEEEEECCC-----CCceEEEEecccCCCCCCCCccccCCCccccCcccchHhHHHHHHHHHHHHhC--CCCCcEEE
Confidence 679999999984 35789999999999876 79999999999999999999985 48999999
Q ss_pred EEeCCcCCCC-------------cchHHHHhcCCc-cCCccEEEEeecCcCCCCeeEEEeCC-C---HHHHHHHHHHccC
Q 002959 228 LFNTGEEEGL-------------NGAHSFVTQHPW-STTIRVAVDLEAMGIGGRSALFQAGP-N---LWAVENFAAVAKY 289 (862)
Q Consensus 228 lf~~aEE~gl-------------~GS~~fv~~h~~-~~~v~a~iNLD~~G~gG~~~lfq~g~-~---~~li~~~~~~a~~ 289 (862)
+|+++||.|+ .||++|+++++. ..++.++||+||+|.++...... +. . +.+++.+.+.++.
T Consensus 154 ~~~~~EE~Gl~~~~~~~~~ds~~~GS~~~~~~~~~~~~~~~~~inlD~~G~~~~~~~~~-~~~~~~~~~l~~~~~~~a~~ 232 (309)
T 3tc8_A 154 IFFDAEDYGTPEFVTDYTPDSWCLGTQFWAKNPHVPNYTAEYGILLDMVGGKNATFFKE-QQSLRAAAPIVEMVWSAARD 232 (309)
T ss_dssp EEECSCSCSCCTTCCSCCTTCSCHHHHHHHHSCSSTTCCCSEEEEEESCCBTTCCEEEC-HHHHHHHHHHHHHHHHHHHH
T ss_pred EEECccccccccccccccccccchhHHHHHhCCCccccceEEEEEecccCCCCCceeec-ccccchHHHHHHHHHHHHHH
Confidence 9999999999 999999964443 36899999999999988753222 22 2 2345555443321
Q ss_pred CCCccccccccc---CCCCCCCCchHHHhhhcCCeEEEEeec------CCCCCCCCcCCccCCCChhHHHHHHHHHHHHH
Q 002959 290 PSGQIIGQDLFA---SGVFETATDFQVYTEVAGLSGLDFAYT------DKSAVYHTKNDRLDLLKPGSLQHLGENMLDFL 360 (862)
Q Consensus 290 p~~~~l~~eif~---~g~ips~TD~~~F~~~~GIPgld~a~~------~~~~~YHT~~Dt~d~Id~~sLq~~g~~~l~ll 360 (862)
.+. ...|+ .|. ..+||.+|.+++|||++++... ...++|||+.||+|+||+++|++.++++++++
T Consensus 233 -~g~---~~~f~~~~~g~--~~sDh~~f~~~~GiP~~~li~~~~~~~~~~~~~~Ht~~Dt~d~id~~~l~~~~~~~~~~v 306 (309)
T 3tc8_A 233 -LGY---GKYFINAAGGA--ITDDHQYVISGRNIPSIDIINYDPESKTGFASYWHTQKDNMENIDRETLKAAGQTVLEVI 306 (309)
T ss_dssp -HTC---TTTEEEEECCC--CCCHHHHHHHHHCCCEEEEEBCCTTSSSSSCTTTTSTTCSGGGBCHHHHHHHHHHHHHHH
T ss_pred -cCC---cceeccCCCCC--CCCccHHHHhcCCCCEEEEecccCcccCCCCCCCCCCcCChhhCCHHHHHHHHHHHHHHH
Confidence 111 11122 122 2689999998789999999765 34578999999999999999999999999998
Q ss_pred HH
Q 002959 361 LQ 362 (862)
Q Consensus 361 ~~ 362 (862)
.+
T Consensus 307 y~ 308 (309)
T 3tc8_A 307 YN 308 (309)
T ss_dssp HH
T ss_pred hc
Confidence 64
No 4
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=100.00 E-value=4.8e-34 Score=312.30 Aligned_cols=249 Identities=19% Similarity=0.291 Sum_probs=179.5
Q ss_pred CCCCHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEEEeccCCCcccccccccCccccccc
Q 002959 82 RGFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSD 161 (862)
Q Consensus 82 ~~fs~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~lg~~~~~~~~ve~d~~~~~~g~~~~~g~~~~~~~~~Y~~ 161 (862)
.+|+++|++++|++|++|++|..||+++.++++||.++|+++| +++++|.+.... +. ..+..
T Consensus 22 ~~~~~~~~~~~l~~L~~~~~R~~gs~~~~~~~~~l~~~l~~~G------~~v~~~~~~~~~---------~~---g~~~~ 83 (314)
T 3gux_A 22 PEFDADSAYQYIQVQADFGPRVPNTQAHKECGEYLAGQLEKFG------AKVYNQYADLIA---------YD---GTILK 83 (314)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHTT------CEEEEEEEEEEC---------TT---SCEEE
T ss_pred CCCCHHHHHHHHHHHHccCCcCCCCHHHHHHHHHHHHHHHHCC------CEEEEEEeeccc---------cC---CCccc
Confidence 5799999999999999999999999999999999999999998 356666554210 00 11235
Q ss_pred cceEEEEEcCCCCCCCCCCeEEEEeecCccCCC-------------CCCCCChhHHHHHHHHHHHHHhccCCCCccEEEE
Q 002959 162 LNHIVLRILPKYASEAGENAILVSSHIDTVSAG-------------EGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFL 228 (862)
Q Consensus 162 ~~NVi~~i~g~~~~~~~~~~Vll~AH~Dsv~~s-------------pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~Fl 228 (862)
..|||++++|+ +++.|+++||||||+.+ +||.||++|||+|||++|.|.+. +++++|+|+
T Consensus 84 ~~Nvia~~~g~-----~~~~ill~aH~Dsv~~~~~~p~~~~~~~~~~GA~D~~sGva~~Le~ar~l~~~--~~~~~i~fv 156 (314)
T 3gux_A 84 SRNIIGAYKPE-----SKKRILLCAHWDSRPYADNDPDPKNHHTPILGVNDGASGVGVLLEIARQIQKE--QPALGIDIV 156 (314)
T ss_dssp EEEEEEEESTT-----CSSEEEEEEECCCCC--------------------CHHHHHHHHHHHHHHHHS--CCSSEEEEE
T ss_pred ceEEEEEECCC-----CCceEEEEccccCCCcCCCCcccccCCcccCCCcccHHHHHHHHHHHHHHHhC--CCCCcEEEE
Confidence 79999999984 35789999999999865 79999999999999999999985 489999999
Q ss_pred EeCCcCCCC--------------cchHHHHhcCCc-cCCccEEEEeecCcCCCCeeEEEeCCC----HHHHHHHHHHccC
Q 002959 229 FNTGEEEGL--------------NGAHSFVTQHPW-STTIRVAVDLEAMGIGGRSALFQAGPN----LWAVENFAAVAKY 289 (862)
Q Consensus 229 f~~aEE~gl--------------~GS~~fv~~h~~-~~~v~a~iNLD~~G~gG~~~lfq~g~~----~~li~~~~~~a~~ 289 (862)
|+++||.|+ .||++|+++++. ..++.++|||||+|..+.. ++..+.. +++++.+.+.++.
T Consensus 157 ~~~~EE~Gl~~~~~~~~~~ds~~~GS~~~~~~~~~~~~~~~~~inlDm~G~~~~~-~~~~g~~~~~~~~l~~~~~~~~~~ 235 (314)
T 3gux_A 157 FFDSEDYGIPEFYDGKYKQDTWCLGSQYWARTPHVQNYNARYGILLDMVGGKDAT-FYYEGYSARTARSEMKKIWKKAHE 235 (314)
T ss_dssp EECSCCC-----------CTTSCHHHHHHHHSCSSTTCCCSEEEEEESCCBTTCC-EEECTTHHHHCHHHHHHHHHHHHH
T ss_pred EECCccccccccccccccccccchhHHHHHhCCcccccceeEEEEEeccCCCCCc-eeeeccccccHHHHHHHHHHHHHH
Confidence 999999999 999999964443 3789999999999998876 4555542 3556665544321
Q ss_pred CCCccccccccc---CCCCCCCCchHHHhhhcCCeEEEEeecC-------CCCCCCCcCCccCCCChhHHHHHHHHHHHH
Q 002959 290 PSGQIIGQDLFA---SGVFETATDFQVYTEVAGLSGLDFAYTD-------KSAVYHTKNDRLDLLKPGSLQHLGENMLDF 359 (862)
Q Consensus 290 p~~~~l~~eif~---~g~ips~TD~~~F~~~~GIPgld~a~~~-------~~~~YHT~~Dt~d~Id~~sLq~~g~~~l~l 359 (862)
.+. ...|. .|. ..+||.+|.+.+|||++++.... ..++|||+.||+|+||+++|++.+++++.+
T Consensus 236 -~g~---~~~f~~~~~~~--~~sDh~pF~~~~GiP~l~~i~~~~~~~~~~f~~~~Ht~~Dt~d~id~~~l~~~~~~~~~~ 309 (314)
T 3gux_A 236 -LGY---GKYFVKEDGGE--TVDDHIYVNKLARIPCVDIINYDAGNPQSSFGSFWHTVNDTMENIDRNTLKAVGQTVMDV 309 (314)
T ss_dssp -HTC---TTTEEEEECCC--CCCHHHHHHHHSCCCEEEEEBCC--------------------CBCHHHHHHHHHHHHHH
T ss_pred -cCC---ccccccccCCC--CCCccHHHHhcCCCceEEEecccccccccCCCCCCCCCcCcchhCCHHHHHHHHHHHHHH
Confidence 111 01121 122 36999999986799999997653 237899999999999999999999999999
Q ss_pred HHH
Q 002959 360 LLQ 362 (862)
Q Consensus 360 l~~ 362 (862)
+.+
T Consensus 310 ~y~ 312 (314)
T 3gux_A 310 IYN 312 (314)
T ss_dssp HHT
T ss_pred Hhh
Confidence 864
No 5
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=100.00 E-value=3.1e-34 Score=315.93 Aligned_cols=252 Identities=21% Similarity=0.245 Sum_probs=184.1
Q ss_pred CHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEEEeccCCCcccccccccCccccccccce
Q 002959 85 SELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNH 164 (862)
Q Consensus 85 s~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~lg~~~~~~~~ve~d~~~~~~g~~~~~g~~~~~~~~~Y~~~~N 164 (862)
+.++..+.|+.| ++||++||++++++++||.++|+++| .+++.|.|..... . ....+..|
T Consensus 36 ~~~~~~~~l~~i--l~pR~~Gs~~~~~~~~~i~~~l~~~g------~~v~~q~f~~~~~---~---------~~~~~~~N 95 (330)
T 4fai_A 36 DKLHLREAIDKI--LIPRVVGTTNHSIVREYIVQSLRDLD------WDVEVNSFHDHAP---I---------KGKLHFHN 95 (330)
T ss_dssp CHHHHHHHHHHH--CSCCCTTSHHHHHHHHHHHHHHHHTT------CEEEEEEEEEEET---T---------TEEEEEEE
T ss_pred HHHHHHHHHHhh--cCCCCCCCHHHHHHHHHHHHHHHHCC------CEEEEeeeeeecC---C---------CCceeEEE
Confidence 344444445544 57999999999999999999999998 4677776654210 0 01236789
Q ss_pred EEEEEcCCCCCCCCCCeEEEEeecCccCC----CCCCCCChhHHHHHHHHHHHHHh---ccCCCCccEEEEEeCCcCCCC
Q 002959 165 IVLRILPKYASEAGENAILVSSHIDTVSA----GEGAGDCSSCVAVMLELARVMSQ---WAHEFKNAVIFLFNTGEEEGL 237 (862)
Q Consensus 165 Vi~~i~g~~~~~~~~~~Vll~AH~Dsv~~----spGA~Dd~sgva~~LE~ar~L~~---~~~~p~~~I~Flf~~aEE~gl 237 (862)
||++++|+ .++.|+|+|||||++. .+||+||++|||+|||+||.|++ .+.+|+++|+|+|++|||.|+
T Consensus 96 ii~~~~~~-----~~~~i~l~aHyDs~~~~~~~~~GA~DnasG~A~lLE~Ar~l~~~~~~~~~p~rtI~fv~fdgEE~Gl 170 (330)
T 4fai_A 96 IIATLNPN-----AERYLVLSCHYDSKYMPGVEFLGATDSAVPCAMLLNLAQVLQEQLKPLKKSKLSLMLLFFDGEEAFE 170 (330)
T ss_dssp EEEESCTT-----CSEEEEEEEECCCCCCTTSCCCCTTTTHHHHHHHHHHHHHTHHHHGGGGTSSEEEEEEEESCCSCSS
T ss_pred EEEEECCC-----CCcEEEEEEeecccccccCCCCCCCCccHhHHHHHHHHHHHHHhhhccCCCCccEEEEEeccccccc
Confidence 99999884 4578999999999864 47999999999999999999976 356799999999999999985
Q ss_pred --------cchHHHHhcC---CccCCccEEEEeecCcCCCCeeEEEeCCCHHHHHHHHH----Hcc------CCC---Cc
Q 002959 238 --------NGAHSFVTQH---PWSTTIRVAVDLEAMGIGGRSALFQAGPNLWAVENFAA----VAK------YPS---GQ 293 (862)
Q Consensus 238 --------~GS~~fv~~h---~~~~~v~a~iNLD~~G~gG~~~lfq~g~~~~li~~~~~----~a~------~p~---~~ 293 (862)
.||++|+++. .+.+++.++||+||+|.+++..........+....+.. ... .+. ..
T Consensus 171 ~~~~~~~llGS~~~a~~~~~~~~~~~i~~~inlDmiG~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (330)
T 4fai_A 171 EWGPKDSIYGARHLAKKWHHEGKLDRIDMLVLLDLLGAPDPAFYSFFENTESWYMRIQSVETRLAKLQLLERYASSGVAQ 250 (330)
T ss_dssp SCBTTBSCHHHHHHHHHHHHTTCSTTEEEEEEECSCSSSSCCEEECCGGGHHHHHHHHHHHHHHHHTTC-----------
T ss_pred cccccchhhhhHHHHhcchhccchhceeEEEEeccCccCCCCceeeccCcchHHHHHHHHHHHhhhhhhhhhhhcccccc
Confidence 7999999753 23578999999999999887654332222222221111 100 000 00
Q ss_pred ccccccccCC---CCCCCCchHHHhhhcCCeEEEEeecCCCCCCCCcCCccCCCChhHHHHHHHHHHHHHHH
Q 002959 294 IIGQDLFASG---VFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQ 362 (862)
Q Consensus 294 ~l~~eif~~g---~ips~TD~~~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d~Id~~sLq~~g~~~l~ll~~ 362 (862)
......|... -....+||.+|.+ .|||++++...+.+++|||+.||+|+||++++++++..+.+++.+
T Consensus 251 ~~~~~~~~~~~~~~~~~~SDH~pF~~-~GIP~l~~i~~~~~~~yHT~~Dt~d~iD~~tl~~~~~ii~~Fv~E 321 (330)
T 4fai_A 251 RDPTRYFQSQAMRSSFIEDDHIPFLR-RNVPILHLIPVPFPSVWHTPDDNASVIDYATTDNLALIIRLFALE 321 (330)
T ss_dssp ----CCEEEEEETTCCCCSTTHHHHT-TTCCEEEECCSSCCTTTTSTTSSGGGCCHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccCCCCCCCCCchHHHHH-CCCCEEEEECCCCCCCCCCCcCChhhCCHHHHHHHHHHHHHHHHH
Confidence 0000111110 0113589999999 999999998777788999999999999999999999988888765
No 6
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=100.00 E-value=6.8e-33 Score=304.87 Aligned_cols=262 Identities=19% Similarity=0.216 Sum_probs=197.2
Q ss_pred CCcccccC--CCCCCHHHHHH-HHHHHHccCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEEEeccCCCccccc
Q 002959 73 PLTAEQAG--RRGFSELEAMK-HVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGT 149 (862)
Q Consensus 73 ~~~~~~~~--~~~fs~erA~~-~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~lg~~~~~~~~ve~d~~~~~~g~~~~~g 149 (862)
+++.++.. +.+|+.+|+++ +|+.+ +++|..||+++.++++||.++|++++. ..++++|.+.....
T Consensus 23 ~l~~~~~~~~~~~~~~~~~~~~~L~~~--~~~R~~gS~~~~~a~~~l~~~l~~~~~----g~~v~~d~f~~~~~------ 90 (330)
T 3pb6_X 23 SLPEARLRRVVGQLDPQRLWSTYLRPL--LVVRTPGSPGNLQVRKFLEATLRSLTA----GWHVELDPFTASTP------ 90 (330)
T ss_dssp CCCHHHHHHHHHTCCHHHHHHHTTGGG--CSCCCTTSHHHHHHHHHHHHHHHHSTT----CCEEEEEEEEEEET------
T ss_pred CCCHHHHHhhcccCCHHHHHHHHHHHH--hCCCCCCCHHHHHHHHHHHHHHHHhCC----CCeEEEEeeecccc------
Confidence 45444322 35799999998 78888 789999999999999999999999952 24677776543200
Q ss_pred ccccCccccccccceEEEEEcCCCCCCCCCCeEEEEeecCccCC------CCCCCCChhHHHHHHHHHHHHHhc-----c
Q 002959 150 GVFKGKTLIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSA------GEGAGDCSSCVAVMLELARVMSQW-----A 218 (862)
Q Consensus 150 ~~~~~~~~~Y~~~~NVi~~i~g~~~~~~~~~~Vll~AH~Dsv~~------spGA~Dd~sgva~~LE~ar~L~~~-----~ 218 (862)
..+.+..|||++++|+ .++.|+++|||||++. .+||.||++|||+|||++|.|.+. +
T Consensus 91 -------~g~~~~~Nvia~~~g~-----~~~~ivl~aH~Dsv~~~~g~~~~~GA~D~asGva~lLe~ar~l~~~~~~~~~ 158 (330)
T 3pb6_X 91 -------LGPVDFGNVVATLDPR-----AARHLTLACHYDSKLFPPGSTPFVGATDSAVPCALLLELAQALDLELSRAKK 158 (330)
T ss_dssp -------TEEEEEEEEEEESCTT-----SSEEEEEEEECCCCCCCTTSCCCCCTTTTHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred -------cCCccceEEEEEECCC-----CCceEEEEeccCCCCCCCCCcCcCCCcCChHHHHHHHHHHHHHHHHHhhccc
Confidence 0123689999999984 2478999999999863 389999999999999999999873 3
Q ss_pred CCCCccEEEEEeCCcCC--------CCcchHHHHhcCC---------ccCCccEEEEeecCcCCCCeeEEEeCCCHHHHH
Q 002959 219 HEFKNAVIFLFNTGEEE--------GLNGAHSFVTQHP---------WSTTIRVAVDLEAMGIGGRSALFQAGPNLWAVE 281 (862)
Q Consensus 219 ~~p~~~I~Flf~~aEE~--------gl~GS~~fv~~h~---------~~~~v~a~iNLD~~G~gG~~~lfq~g~~~~li~ 281 (862)
.+++++|.|+|+++||. |+.||++|++++. ..++++++||+||+|..++.....-+...++.+
T Consensus 159 ~~~~~~i~fv~~~~EE~f~~w~~~~gl~GS~~~a~~~~~~~~~~~~~~~~~i~~~inlDmiG~~~~~~~~~~~~t~~~~~ 238 (330)
T 3pb6_X 159 QAAPVTLQLLFLDGEEALKEWGPKDSLYGSRHLAQLMESIPHSPGPTRIQAIELFMLLDLLGAPNPTFYSHFPRTVRWFH 238 (330)
T ss_dssp TTCSEEEEEEEESCCSCSSCCSTTSSCHHHHHHHHHHHHSBCSSCSBTTTTEEEEEEEESCSSSSCCBCCCCGGGHHHHH
T ss_pred CCCCCcEEEEEEcCcccccccCCCCCCccHHHHHHHHHhcCCccccchhhCeEEEEeccCCCCCCCCceeecCcchHHHH
Confidence 68999999999999999 9999999996521 347899999999999987764211111233332
Q ss_pred HHHHH---c---c----CCCCcccccccccC--CCCCCCCchHHHhhhcCCeEEEEeecCCCCCCCCcCCccCCCChhHH
Q 002959 282 NFAAV---A---K----YPSGQIIGQDLFAS--GVFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSL 349 (862)
Q Consensus 282 ~~~~~---a---~----~p~~~~l~~eif~~--g~ips~TD~~~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d~Id~~sL 349 (862)
.+.+. . . +|... ..|.. ..-...|||.+|.+ .|||++.+......+.|||+.||+|+||.+++
T Consensus 239 ~l~~i~~~~~~~g~~~~~p~~~----~~f~~~~~~~~~~SDH~pF~~-~GIP~~~~~~~~f~~~yHt~~Dt~d~id~~~l 313 (330)
T 3pb6_X 239 RLRSIEKRLHRLNLLQSHPQEV----MYFQPGEPFGSVEDDHIPFLR-RGVPVLHLISTPFPAVWHTPADTEVNLHPPTV 313 (330)
T ss_dssp HHHHHHHHHHHTTCCSSCCSSC----SSBCSSCSSCCCSCTTHHHHT-TTCCEEEEECSSCCTTTTSTTCSGGGSCHHHH
T ss_pred HHHHHHHHHHHcCccccCCccc----ccccccccCCCCCCchHhHHH-CCCCEEEEEcCCCCCCCCCCcCchhhCCHHHH
Confidence 22211 1 1 12111 11210 01124799999999 99999999876667789999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 002959 350 QHLGENMLDFLLQT 363 (862)
Q Consensus 350 q~~g~~~l~ll~~L 363 (862)
++.++.+..++.+.
T Consensus 314 ~~~~~i~~~fv~Ey 327 (330)
T 3pb6_X 314 HNLCRILAVFLAEY 327 (330)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999988764
No 7
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=99.98 E-value=3.5e-31 Score=285.37 Aligned_cols=254 Identities=17% Similarity=0.205 Sum_probs=198.8
Q ss_pred CCCHHHHHHHHHHHHcc-----CCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEEEeccCCCcccccccccCccc
Q 002959 83 GFSELEAMKHVKALTQL-----GPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTL 157 (862)
Q Consensus 83 ~fs~erA~~~L~~L~~i-----gpr~~GS~~n~~a~~yL~~~l~~lg~~~~~~~~ve~d~~~~~~g~~~~~g~~~~~~~~ 157 (862)
+++.++++++|++|+++ ++|..|++++.++++||.++++++| .+++.+.+...
T Consensus 3 ~i~~~~~~~~l~~L~~i~s~s~~~r~~~~~~e~~~~~~i~~~l~~~g------~~v~~~~~~~~---------------- 60 (284)
T 1tkj_A 3 DIPLANVKAHLTQLSTIAANNGGNRAHGRPGYKASVDYVKAKLDAAG------YTTTLQQFTSG---------------- 60 (284)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTTTCCCTTSHHHHHHHHHHHHHHHHHT------CEEEEEEEEET----------------
T ss_pred cCCHHHHHHHHHHHHcccccCCCCCCCCCHHHHHHHHHHHHHHHHcC------CeEEEEEeccC----------------
Confidence 57899999999999986 3577888888999999999999998 34555433210
Q ss_pred cccccceEEEEEcCCCCCCCCCCeEEEEeecCccCCCCCCCCChhHHHHHHHHHHHHHhccCCCCccEEEEEeCCcCCCC
Q 002959 158 IYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGL 237 (862)
Q Consensus 158 ~Y~~~~NVi~~i~g~~~~~~~~~~Vll~AH~Dsv~~spGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~Flf~~aEE~gl 237 (862)
..+..||+++++|+ .+++.|+++||+|+|+.++||.||++|+|++||++|.|++.+.+++++|+|+|+++||.|+
T Consensus 61 -~~~~~nvi~~~~g~----~~~~~i~l~aH~D~v~~g~Ga~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~g~ 135 (284)
T 1tkj_A 61 -GATGYNLIANWPGG----DPNKVLMAGAHLDSVSSGAGINDNGSGSAAVLETALAVSRAGYQPDKHLRFAWWGAEELGL 135 (284)
T ss_dssp -TEEEEEEEEECSCS----EEEEEEEEEEECCCCTTSCCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGTS
T ss_pred -CCCceeEEEEEeCC----CCCCEEEEEeecCCCCCCCCCccChHHHHHHHHHHHHHHhcCCCCCceEEEEEECCcccCC
Confidence 01467999999874 2457899999999999999999999999999999999999877899999999999999999
Q ss_pred cchHHHHhcCCc--cCCccEEEEeecCcCCCCeeEEEeCCCHHHHHHHHHHccCCCCcccccccccCCCCCCCCchHHHh
Q 002959 238 NGAHSFVTQHPW--STTIRVAVDLEAMGIGGRSALFQAGPNLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYT 315 (862)
Q Consensus 238 ~GS~~fv~~h~~--~~~v~a~iNLD~~G~gG~~~lfq~g~~~~li~~~~~~a~~p~~~~l~~eif~~g~ips~TD~~~F~ 315 (862)
.||+.|+++++. .+++.++||+|+.|.++....+. +.++.+.+.+.+.+++ .+.. .+... .-..+|||.+|.
T Consensus 136 ~Gs~~~~~~~~~~~~~~~~~~i~~D~~g~~~~~~~~~-~~~~~l~~~~~~~~~~-~gi~--~~~~~--~~~~~sD~~~f~ 209 (284)
T 1tkj_A 136 IGSKFYVNNLPSADRSKLAGYLNFDMIGSPNPGYFVY-DDDPVIEKTFKNYFAG-LNVP--TEIET--EGDGRSDHAPFK 209 (284)
T ss_dssp HHHHHHHHHSCHHHHTTEEEEEEECCCCCSSCCCEEC-CSSHHHHHHHHHHHHH-HTCC--CEECC--SSTTCSTHHHHH
T ss_pred cCHHHHHhhCccchhhcEEEEEEecCCCCCCCCeEEe-cCCHHHHHHHHHHHHH-cCCC--cccCC--CCCCCCchHHHH
Confidence 999999988774 36899999999999876544333 3466666555443321 1110 11111 113579999999
Q ss_pred hhcCCeEEEEeecC-------------------CCCCCCCcCCccCCCChhHHHHHHHHHHHHHHHHhcCCCCC
Q 002959 316 EVAGLSGLDFAYTD-------------------KSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASSTSIP 370 (862)
Q Consensus 316 ~~~GIPgld~a~~~-------------------~~~~YHT~~Dt~d~Id~~sLq~~g~~~l~ll~~La~~~~l~ 370 (862)
+ .|||++.+.... ..++|||+.||++++|.+.+++.++.+..+++.|++++.+|
T Consensus 210 ~-~Gip~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~yHt~~D~~~~id~~~l~~~~~~~~~~~~~la~~~~~P 282 (284)
T 1tkj_A 210 N-VGVPVGGLFTGAGYTKSAAQAQKWGGTAGQAFDRCYHSSCDSLSNINDTALDRNSDAAAHAIWTLSSGTGEP 282 (284)
T ss_dssp H-TTCCEEEEECCCSSBCCHHHHHHHCSCTTSBSCTTTTSTTCSTTSCCHHHHHHHHHHHHHHHHHHHC-----
T ss_pred H-CCCCEEEeecCcccccccchhhccccccccCCCCCCCCCcCChhhCCHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 8 999999987541 24679999999999999999999999999999999998776
No 8
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=99.98 E-value=1.7e-31 Score=293.94 Aligned_cols=268 Identities=20% Similarity=0.259 Sum_probs=197.9
Q ss_pred cccCCCCCcccccC--CCCCCHHHH-HHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHh--cccccCCcceEEEEEEecc
Q 002959 67 YEHMPPPLTAEQAG--RRGFSELEA-MKHVKALTQLGPHAVGSDALDRALQYVLAASQK--IKESKHWEADVEVDFFHAK 141 (862)
Q Consensus 67 ~~~lP~~~~~~~~~--~~~fs~erA-~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~--lg~~~~~~~~ve~d~~~~~ 141 (862)
++.+|.+++.++.. +.+++.+|+ .++|++| +++|..+|++++++++||.++|++ .| +++++|.+...
T Consensus 9 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~L--~~~r~~~s~~~~~~~~~l~~~l~~~~~G------~~v~~~~~~~~ 80 (329)
T 2afw_A 9 NYHQPAILNSSALRQIAEGTSISEMWQNDLQPL--LIERYPGSPGSYAARQHIMQRIQRLQAD------WVLEIDTFLSQ 80 (329)
T ss_dssp HHCCCCCCCHHHHHHHHHHCCHHHHHHHTTGGG--CSCCCTTSHHHHHHHHHHHHHHHTSSSC------CEEEEEEEEEC
T ss_pred cccCCCCCChHHHHHhhhhcCHHHHHHHHHHHH--cCCCCCCCHHHHHHHHHHHHHHHhhCCC------CEEEEEEEEec
Confidence 35577777654432 356999999 8999999 688999999999999999999999 55 46777665532
Q ss_pred CCCcccccccccCccccccccceEEEEEcCCCCCCCCCCeEEEEeecCccCCC-------CCCCCChhHHHHHHHHHHHH
Q 002959 142 SGANRVGTGVFKGKTLIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAG-------EGAGDCSSCVAVMLELARVM 214 (862)
Q Consensus 142 ~g~~~~~g~~~~~~~~~Y~~~~NVi~~i~g~~~~~~~~~~Vll~AH~Dsv~~s-------pGA~Dd~sgva~~LE~ar~L 214 (862)
.. ..+.+..|||++++|+ +++.|+++||||||+.+ +||.||++|||+|||++|.|
T Consensus 81 ~~-------------~g~~~~~Nvi~~~~g~-----~~~~i~l~aH~Dsv~~~~~~~~~~~Ga~D~~sGva~~le~ar~l 142 (329)
T 2afw_A 81 TP-------------YGYRSFSNIISTLNPT-----AKRHLVLACHYDSKYFSHWNNRVFVGATDSAVPCAMMLELARAL 142 (329)
T ss_dssp CT-------------TSSEEEEEEEEESSTT-----SSEEEEEEEECCCCCCCCBTTBCCCCTTTTHHHHHHHHHHHHHT
T ss_pred CC-------------CCCceEeEEEEEECCC-----CCcEEEEEEeccCCCcCcccCcCCCCcccchhhHHHHHHHHHHH
Confidence 10 0122589999999873 45789999999999865 89999999999999999999
Q ss_pred Hhc--------cCCCCccEEEEEeCCcCC--------CCcchHHHHhcCC------------ccCCccEEEEeecCcCCC
Q 002959 215 SQW--------AHEFKNAVIFLFNTGEEE--------GLNGAHSFVTQHP------------WSTTIRVAVDLEAMGIGG 266 (862)
Q Consensus 215 ~~~--------~~~p~~~I~Flf~~aEE~--------gl~GS~~fv~~h~------------~~~~v~a~iNLD~~G~gG 266 (862)
.+. +.+++++|+|+|+++||. |+.||++|++++. ..+++.++||+|++|.++
T Consensus 143 ~~~~~~~~~~~g~~~~~~i~~~~~~~EE~~~~~~~~~gl~Gs~~~~~~~~~~~~p~~~~~~~~~~~i~~~inlD~iG~~~ 222 (329)
T 2afw_A 143 DKKLLSLKTVSDSKPDLSLQLIFFDGEEAFLHWSPQDSLYGSRHLAAKMASTPHPPGARGTSQLHGMDLLVLLDLIGAPN 222 (329)
T ss_dssp HHHHHTTC------CCEEEEEEEESCCSCSSSCCSSSSCHHHHHHHHHHHTSBSSTTCSSCBTTTTEEEEEEECSCCSSS
T ss_pred HHHHhhhcccccCCCCccEEEEEecCcccccccCCCccchhHHHHHHHHHhCCCcccccccccccceEEEEEeccCCCCC
Confidence 885 357899999999999998 8999999997642 145799999999999887
Q ss_pred CeeE--EEeCCCHHHHHHH---HHHccCC---CCcccccccccCCCC--CCCCchHHHhhhcCCeEEEEeecCCCCCCCC
Q 002959 267 RSAL--FQAGPNLWAVENF---AAVAKYP---SGQIIGQDLFASGVF--ETATDFQVYTEVAGLSGLDFAYTDKSAVYHT 336 (862)
Q Consensus 267 ~~~l--fq~g~~~~li~~~---~~~a~~p---~~~~l~~eif~~g~i--ps~TD~~~F~~~~GIPgld~a~~~~~~~YHT 336 (862)
...+ +.. ..+ +.+.. .+..... .........|..... ...+||.+|.+ .|||++++......+.|||
T Consensus 223 ~~~~~~~~~-~~~-~~~~l~~~~~~~~~~g~~~~~~~~~~~f~~~~~~g~~~sDh~~F~~-~GiP~~~~~~~~~~~~yHt 299 (329)
T 2afw_A 223 PTFPNFFPN-SAR-WFERLQAIEHELHELGLLKDHSLEGRYFQNYSYGGVIQDDHIPFLR-RGVPVLHLIPSPFPEVWHT 299 (329)
T ss_dssp CCBCCCCGG-GHH-HHHHHHHHHHHHHHTTCSSSCCSTTCSBCSCCCCSCCCSTTHHHHT-TTCCEEEECCSSCCTTTTS
T ss_pred CceeeeccC-cch-HHHHHHHHHHHHHHcCCccCCCcccccccccccCCCCCCCCHhHHH-CCCCEEEEEcCCCCCCCCC
Confidence 6532 211 122 22211 1111000 000111112321111 13699999999 7999999988777789999
Q ss_pred cCCccCCCChhHHHHHHHHHHHHHHHH
Q 002959 337 KNDRLDLLKPGSLQHLGENMLDFLLQT 363 (862)
Q Consensus 337 ~~Dt~d~Id~~sLq~~g~~~l~ll~~L 363 (862)
++||++++|+++++++++.+..++.+.
T Consensus 300 ~~Dt~~~ld~~~l~~~~~~~~~~v~ey 326 (329)
T 2afw_A 300 MDDNEENLDESTIDNLNKILQVFVLEY 326 (329)
T ss_dssp TTCSSTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCchhhCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999888887654
No 9
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=99.97 E-value=1.7e-29 Score=274.05 Aligned_cols=262 Identities=18% Similarity=0.216 Sum_probs=197.9
Q ss_pred CCCCHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEEEeccCCCcccccccccCccccccc
Q 002959 82 RGFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSD 161 (862)
Q Consensus 82 ~~fs~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~lg~~~~~~~~ve~d~~~~~~g~~~~~g~~~~~~~~~Y~~ 161 (862)
.+++.++++++|++|+++++|..+|+++.++++||.+++++++... + .++++.+... ..+
T Consensus 15 ~~~~~~~~~~~l~~L~~i~sr~~~s~~~~~~~~~l~~~l~~~g~~~--~-~~~~~~~~~~-----------------~~~ 74 (299)
T 1rtq_A 15 PQVDASQITGTISSLESFTNRFYTTTSGAQASDWIASEWQALSASL--P-NASVKQVSHS-----------------GYN 74 (299)
T ss_dssp GGCCHHHHHHHHHHHHTSSCCCTTSHHHHHHHHHHHHHHHHHHTTS--T-TEEEEEEEET-----------------TEE
T ss_pred HhcCHHHHHHHHHHHhCcCCCCCCCchHHHHHHHHHHHHHHhcCCc--c-cceeeeeccC-----------------CCC
Confidence 5689999999999999998898899998999999999999987321 1 2444433211 014
Q ss_pred cceEEEEEcCCCCCCCCCCeEEEEeecCccCC--------CCCCCCChhHHHHHHHHHHHHHhccCCCCccEEEEEeCCc
Q 002959 162 LNHIVLRILPKYASEAGENAILVSSHIDTVSA--------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGE 233 (862)
Q Consensus 162 ~~NVi~~i~g~~~~~~~~~~Vll~AH~Dsv~~--------spGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~Flf~~aE 233 (862)
..||+++++|+ ..+++.|+++||+|+|+. ++||.||++|||++||++|.|++.+.+++++|+|+|+++|
T Consensus 75 ~~nvi~~~~g~---~~~~~~v~l~aH~D~v~~~~~~~~~~~~Ga~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~E 151 (299)
T 1rtq_A 75 QKSVVMTITGS---EAPDEWIVIGGHLDSTIGSHTNEQSVAPGADDDASGIAAVTEVIRVLSENNFQPKRSIAFMAYAAE 151 (299)
T ss_dssp EEEEEEEECCS---SEEEEEEEEEEECCCCSSTTCCTTCCCCCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCG
T ss_pred CceEEEEEECC---CCCCCEEEEEeccccCCCcCcCCCcccCCCcccHHHHHHHHHHHHHHHHcCCCCCceEEEEEECCc
Confidence 68999999885 124578999999999972 7999999999999999999999987789999999999999
Q ss_pred CCCCcchHHHHhcCCc-cCCccEEEEeecCcCCC--CeeEEEeCC-CHHHHHHHHHHccCCCCcccccccccCCCCCCCC
Q 002959 234 EEGLNGAHSFVTQHPW-STTIRVAVDLEAMGIGG--RSALFQAGP-NLWAVENFAAVAKYPSGQIIGQDLFASGVFETAT 309 (862)
Q Consensus 234 E~gl~GS~~fv~~h~~-~~~v~a~iNLD~~G~gG--~~~lfq~g~-~~~li~~~~~~a~~p~~~~l~~eif~~g~ips~T 309 (862)
|.|+.||+.++++++. .+++.++||+|+.|..| +.+.+.... ++.+.+...+.++. ....+... +.. ....+|
T Consensus 152 E~g~~Gs~~~~~~~~~~~~~~~~~i~~D~~g~~g~~~~i~~~~~~~~~~l~~~l~~~a~~-~~~~i~~~-~~~-~~~~~s 228 (299)
T 1rtq_A 152 EVGLRGSQDLANQYKSEGKNVVSALQLDMTNYKGSAQDVVFITDYTDSNFTQYLTQLMDE-YLPSLTYG-FDT-CGYACS 228 (299)
T ss_dssp GGTSHHHHHHHHHHHHTTCEEEEEEECSCCSCCCSSSSEEEECTTSCHHHHHHHHHHHHH-HCTTCCEE-EEC-CSSCCS
T ss_pred cCCchhHHHHHHhhhhccccEEEEEEecCCCCCCCCcceEEEeCCCCchHHHHHHHHHHH-hCccCCcc-cCC-CCCCCC
Confidence 9999999999987654 36789999999998744 334444322 55444433332211 00011111 111 112579
Q ss_pred chHHHhhhcCCeEEEEee---cCCCCCCCCcCCccCCCCh--hHHHHHHHHHHHHHHHHhcCCCCC
Q 002959 310 DFQVYTEVAGLSGLDFAY---TDKSAVYHTKNDRLDLLKP--GSLQHLGENMLDFLLQTASSTSIP 370 (862)
Q Consensus 310 D~~~F~~~~GIPgld~a~---~~~~~~YHT~~Dt~d~Id~--~sLq~~g~~~l~ll~~La~~~~l~ 370 (862)
||.+|.+ .|||++.+.. .+...+|||+.||++++|. ..++++++.+.+++.+|++++.+.
T Consensus 229 D~~~f~~-~GiP~~~~~~~~~~~~~~~yHt~~Dt~~~~d~~~~~~~~~~~l~~~~~~~La~~~~~~ 293 (299)
T 1rtq_A 229 DHASWHN-AGYPAAMPFESKFNDYNPRIHTTQDTLANSDPTGSHAKKFTQLGLAYAIEMGSATGDT 293 (299)
T ss_dssp THHHHHH-TTCCEECEESSCGGGSCTTTTSTTCCGGGSCTTCHHHHHHHHHHHHHHHHHHHCCC--
T ss_pred cHHHHHH-CCCCEEEecccccccCCCCCCCccccccccCccHHHHHHHHHHHHHHHHHHhCCCcCC
Confidence 9999998 9999986542 2344689999999999998 588999999999999999998754
No 10
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=99.96 E-value=7.9e-30 Score=301.62 Aligned_cols=209 Identities=16% Similarity=0.181 Sum_probs=175.7
Q ss_pred cccceEEEEEcCCCCCCCCCCeEEEEeecCccCCCCCCCCChhHHHHHHHHHHHHHhc----cCCCCccEEEEEeCCcCC
Q 002959 160 SDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQW----AHEFKNAVIFLFNTGEEE 235 (862)
Q Consensus 160 ~~~~NVi~~i~g~~~~~~~~~~Vll~AH~Dsv~~spGA~Dd~sgva~~LE~ar~L~~~----~~~p~~~I~Flf~~aEE~ 235 (862)
....|||++++|+ +.++++|+++||+||| ++||.||++|+|+|||++|.|.+. +++|+|+|+|++|++||.
T Consensus 264 ~~~~NVi~~i~G~---~~~~~~vvvgaH~Ds~--~~Ga~D~~sG~a~lLe~ar~l~~~~~~~g~~p~r~I~f~~~~~EE~ 338 (640)
T 3kas_A 264 IKILNIFGVIKGF---VEPDHYVVVGAQRDAW--GPGAAKSGVGTALLLKLAQMFSDMVLKDGFQPSRSIIFASWSAGDF 338 (640)
T ss_dssp EEEEEEEEEECCS---SEEEEEEEEEEECCCS--SCCTTTTHHHHHHHHHHHHHHHHHHHTSCCCCSEEEEEEEESSGGG
T ss_pred eeEEEEEEEEeCC---cCCCCceeeecccCCC--CCCCCcCcHHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEECCccc
Confidence 3789999999995 2467899999999999 489999999999999999999974 679999999999999999
Q ss_pred CCcchHHHHhcCC-c-cCCccEEEEeecCcCCCCeeEEEeCC-CHHHHHHHHHHccCCCCc-ccccc-ccc--CCCCCCC
Q 002959 236 GLNGAHSFVTQHP-W-STTIRVAVDLEAMGIGGRSALFQAGP-NLWAVENFAAVAKYPSGQ-IIGQD-LFA--SGVFETA 308 (862)
Q Consensus 236 gl~GS~~fv~~h~-~-~~~v~a~iNLD~~G~gG~~~lfq~g~-~~~li~~~~~~a~~p~~~-~l~~e-if~--~g~ips~ 308 (862)
|+.||++|+++|. + .+++.++||+|++|.|++...++++| ..++++.+.+.+++|.+. ++.++ .+. .+.++++
T Consensus 339 gl~GS~~~~~~~~~~l~~~~~a~iNlD~~~~G~~~l~~~~~p~l~~l~~~~~~~v~~P~~~~tl~~~~~w~~~~~~~~~~ 418 (640)
T 3kas_A 339 GSVGATEWLEGYLSSLHLKAFTYINLDKAVLGTSNFKVSASPLLYTLIEKTMQNVKHPVTGQFLYQDSNWASKVEKLTLD 418 (640)
T ss_dssp TSHHHHHHHHHTTTTGGGTEEEEEECTTCBSCSSEEEEEECGGGHHHHHHHHTTCBCTTTCSBSCCCTTGGGGCCCCCTT
T ss_pred CchhHHHHHHhhhhhhhhCEEEEEecccCccCCCceEEEeCHHHHHHHHHHHHhCCCCCCCCceecccccccccCCCCCC
Confidence 9999999999884 3 48999999999999988777777665 356677676667888753 34332 232 4678999
Q ss_pred CchHHHhhhcCCeEEEEeecCC-C-CCCCCcCCccCCCCh------hHHHHHHHHHHHHHHHHhcCCCCCCCC
Q 002959 309 TDFQVYTEVAGLSGLDFAYTDK-S-AVYHTKNDRLDLLKP------GSLQHLGENMLDFLLQTASSTSIPKGN 373 (862)
Q Consensus 309 TD~~~F~~~~GIPgld~a~~~~-~-~~YHT~~Dt~d~Id~------~sLq~~g~~~l~ll~~La~~~~l~~~~ 373 (862)
|||.+|.++.|||+++++|..+ . .+|||.+||+++++. ..++.+++.+..++.+||+++.+|.+.
T Consensus 419 sD~~~F~~~~GIP~~~~~~~~~~~y~~yHT~~Dt~~~i~~~~~~~~~~h~~~a~~~g~l~l~La~~~~lP~~~ 491 (640)
T 3kas_A 419 NAAFPFLAYSGIPAVSFCFCEDTDYPYLGTTMDTYKELIERIPELNKVARAAAEVAGQFVIKLTHDVELNLDY 491 (640)
T ss_dssp STHHHHHHHHCCCEEEEEEECSSCCTTTTSTTCCHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHSSSCCCCT
T ss_pred cchHHHHHhCCCCeeeccccCCCCCCCcCCccccHHHHHhhcCcHHHHHHHHHHHHHHHHHHHhcCCCCCCCH
Confidence 9999999889999999999865 3 359999999997764 467788999999999999999999653
No 11
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=99.96 E-value=6.9e-29 Score=296.21 Aligned_cols=209 Identities=19% Similarity=0.240 Sum_probs=174.5
Q ss_pred ccccceEEEEEcCCCCCCCCCCeEEEEeecCccCCCCCCCCChhHHHHHHHHHHHHHh---ccCCCCccEEEEEeCCcCC
Q 002959 159 YSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQ---WAHEFKNAVIFLFNTGEEE 235 (862)
Q Consensus 159 Y~~~~NVi~~i~g~~~~~~~~~~Vll~AH~Dsv~~spGA~Dd~sgva~~LE~ar~L~~---~~~~p~~~I~Flf~~aEE~ 235 (862)
.....|||++++|+ +.+++.|+++||+|||+ +||.||++|+|++||++|.|.+ .+++|+|+|+|++|++||.
T Consensus 309 ~~~~~NVi~~i~G~---~~~~~~vllgaH~Ds~~--~Ga~D~~sG~a~lLe~ar~l~~~~~~g~~p~r~I~f~~~~~EE~ 383 (707)
T 3fed_A 309 ITRIYNVVGTIRGS---VEPDRYVILGGHRDSWV--FGAIDPTSGVAVLQEIARSFGKLMSKGWRPRRTIIFASWDAEEF 383 (707)
T ss_dssp EEEEEEEEEEECCS---SEEEEEEEEEEECCCSS--SCTTTTHHHHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGG
T ss_pred EEEEEEEEEEEeCC---CCCCceEEEeccccCCC--CCCccCcHHHHHHHHHHHHHHhhhhccCCCCCCEEEEEeCCccc
Confidence 34789999999995 24678999999999997 6999999999999999999987 4678999999999999999
Q ss_pred CCcchHHHHhcCC--ccCCccEEEEeecCcCCCCeeEEEeCC-CHHHHHHHHHHccCCCC----ccccccccc-------
Q 002959 236 GLNGAHSFVTQHP--WSTTIRVAVDLEAMGIGGRSALFQAGP-NLWAVENFAAVAKYPSG----QIIGQDLFA------- 301 (862)
Q Consensus 236 gl~GS~~fv~~h~--~~~~v~a~iNLD~~G~gG~~~lfq~g~-~~~li~~~~~~a~~p~~----~~l~~eif~------- 301 (862)
|+.||++|+++|+ +.+++.++||+|++|.|+....+++++ ..+++..+.+.+++|.+ .++.+.+++
T Consensus 384 Gl~GS~~~~~~~~~~~~~~~~a~iNlD~~~~g~~~~~~~~sp~l~~~i~~~~~~v~~P~~~~~~~tly~~w~~~~~~~~~ 463 (707)
T 3fed_A 384 GLLGSTEWAEENVKILQERSIAYINSDSSIEGNYTLRVDCTPLLYQLVYKLTKEIPSPDDGFESKSLYESWLEKDPSPEN 463 (707)
T ss_dssp TSHHHHHHHHHHHHHHHHHEEEEEECSCSBSCSSEEEEEECGGGHHHHHHHHTTSBCCSTTCTTSBHHHHHHHHSEETTE
T ss_pred cchhHHHHHHhcchhhhhCEEEEEEecccccCCceEEEecCHHHHHHHHHHHhcCCCCccccccccHHHHHHhhcccccc
Confidence 9999999998886 468899999999999998777788666 46777777777788975 344433332
Q ss_pred -----CCCCCCCCchHHHhhhcCCeEEEEeecCC-------C-CCCCCcCCccCCCCh------hHHHHHHHHHHHHHHH
Q 002959 302 -----SGVFETATDFQVYTEVAGLSGLDFAYTDK-------S-AVYHTKNDRLDLLKP------GSLQHLGENMLDFLLQ 362 (862)
Q Consensus 302 -----~g~ips~TD~~~F~~~~GIPgld~a~~~~-------~-~~YHT~~Dt~d~Id~------~sLq~~g~~~l~ll~~ 362 (862)
.+.+.++|||.+|.++.|||+++++|..+ . +.|||.+||+++++. ...+.+++....++.+
T Consensus 464 ~~~p~i~~lgsgSD~~~F~~~~GIPs~~~~f~~~~~~~~~~~y~~YHT~~Dt~~~~~~~~Dp~f~~h~~~a~~~g~l~l~ 543 (707)
T 3fed_A 464 KNLPRINKLGSGSDFEAYFQRLGIASGRARYTKNKKTDKYSSYPVYHTIYETFELVEKFYDPTFKKQLSVAQLRGALVYE 543 (707)
T ss_dssp EEEECEECCCSSSTTHHHHHTTCCCEEEEEEECCTTTCCSSSCTTTTSTTCCHHHHHHHTCTTCHHHHHHHHHHHHHHHH
T ss_pred cCCcccccCCCCCChHHHHHhCCcceeccccccCccccccCCCCCcCCCcccHHHHHHhcCchHHHHHHHHHHHHHHHHH
Confidence 12355899999999989999999999844 3 379999999986643 4566688999999999
Q ss_pred HhcCCCCCCC
Q 002959 363 TASSTSIPKG 372 (862)
Q Consensus 363 La~~~~l~~~ 372 (862)
||+++.+|.+
T Consensus 544 La~~~vlP~~ 553 (707)
T 3fed_A 544 LVDSKIIPFN 553 (707)
T ss_dssp HHHCSSCCCC
T ss_pred HhCCccCCCC
Confidence 9999999864
No 12
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=99.95 E-value=5.6e-27 Score=267.87 Aligned_cols=199 Identities=18% Similarity=0.201 Sum_probs=159.5
Q ss_pred ccceEEEEEcCCCCCCCCCCeEEEEeecCccCCCCCCCCChhHHHHHHHHHHHHHhccCCCCccEEEEEeCCcCCCCcch
Q 002959 161 DLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGA 240 (862)
Q Consensus 161 ~~~NVi~~i~g~~~~~~~~~~Vll~AH~Dsv~~spGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~Flf~~aEE~gl~GS 240 (862)
...||+++++|+ +.+++.|+++||+|||+.++||.||++|++++||++|.|++.+.+|+|+|+|+|+++||.|+.||
T Consensus 234 ~~~Nvi~~~~g~---~~~~~~i~~~aH~Ds~~~g~Ga~D~~sG~a~~le~a~~l~~~~~~~~~~i~f~~~~~EE~gl~Gs 310 (444)
T 3iib_A 234 TSYNVIAEVKGS---TKADEIVLIGAHLDSWDEGTGAIDDGAGVAIVTAAAKHILDLPQKPERTIRVVLYAAEELGLLGG 310 (444)
T ss_dssp EEEEEEEEECCS---TEEEEEEEEEEECCCCSSSCCTTTTHHHHHHHHHHHHHHHTSSSCCSEEEEEEEESCGGGTSHHH
T ss_pred eeEEEEEEEeCC---CCCCCEEEEEeecccCCCCCCCccchHHHHHHHHHHHHHHhcCCCCCCeEEEEEECCcccCCcCH
Confidence 689999999985 23568999999999999999999999999999999999999888899999999999999999999
Q ss_pred HHHHhcCCc-cCCccEEEEeecCcCCCCeeEEEeCC-CHHHHHHHHHHccCCCCcccccccccCCCCCCCCchHHHhhhc
Q 002959 241 HSFVTQHPW-STTIRVAVDLEAMGIGGRSALFQAGP-NLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYTEVA 318 (862)
Q Consensus 241 ~~fv~~h~~-~~~v~a~iNLD~~G~gG~~~lfq~g~-~~~li~~~~~~a~~p~~~~l~~eif~~g~ips~TD~~~F~~~~ 318 (862)
++|+++|.. .+++.++||+|+.|.......++.++ ...+++.+.+.. .+.+... . .....++|||.+|.+ .
T Consensus 311 ~~~~~~~~~~~~~~~~~~n~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~--~---~~~~~~~SD~~~f~~-~ 383 (444)
T 3iib_A 311 KTYAKEHEAELEKHYIAAESDFGAGPIYQIDWRVADTAHSPVINAMKVA-EPLGVAA--G---NNKASGGPDVSMLPA-L 383 (444)
T ss_dssp HHHHHHTGGGGGGEEEEEECCSTTCCEEEEEEECCHHHHHHHHHHGGGG-GGGTCEE--C---CSCCCCCGGGTTSGG-G
T ss_pred HHHHHhhHhhhhceeEEEECcCCCCcceEEEeecChhhHHHHHHHHHHH-hhcCCcc--c---cCCCCCCCccHHHHH-C
Confidence 999988854 36789999999866332222233222 245555555432 2333211 1 112457899999998 9
Q ss_pred CCeEEEEeecCC--CCCCCCcCCccCCCChhHHHHHHHHHHHHHHHHhcCCCC
Q 002959 319 GLSGLDFAYTDK--SAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASSTSI 369 (862)
Q Consensus 319 GIPgld~a~~~~--~~~YHT~~Dt~d~Id~~sLq~~g~~~l~ll~~La~~~~l 369 (862)
|||++++..... .++|||+.||+|+||++.|++.++.+..+++.||++++.
T Consensus 384 GiP~~~l~~~~~~~~~~yHt~~Dt~d~id~~~l~~~~~~~~~~v~~lA~~~~~ 436 (444)
T 3iib_A 384 GVPVASLRQDGSDYFDYHHTPNDTLDKINPEALAQNVAVYAQFAWVMANSKVE 436 (444)
T ss_dssp TCCEEEEEECCTTGGGTTTSTTCCGGGSCHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred CCCEEEeecCCCcCCCCCCCCccccccCCHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 999999876432 357999999999999999999999999999999999763
No 13
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=99.94 E-value=1.1e-25 Score=255.31 Aligned_cols=199 Identities=22% Similarity=0.260 Sum_probs=156.8
Q ss_pred ccceEEEEEcCCCCCCCCCCeEEEEeecCccCCCCCCCCChhHHHHHHHHHHHHHhccCCCCccEEEEEeCCcCCCCcch
Q 002959 161 DLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGA 240 (862)
Q Consensus 161 ~~~NVi~~i~g~~~~~~~~~~Vll~AH~Dsv~~spGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~Flf~~aEE~gl~GS 240 (862)
...||+++++|+.....+++.|+++||+|||+.+|||.||++|||++||++|.|.+ .+++|+|+|+++++||.|+.||
T Consensus 202 ~~~Nvi~~~~g~~~~~~~~~~v~~~aH~D~v~~g~Ga~D~~~G~a~~le~~~~l~~--~~~~~~i~~~~~~~EE~g~~Gs 279 (421)
T 2ek8_A 202 TSHNVIATKKPDANKKNTNDIIIIGSHHDSVEKAPGANDDASGVAVTLELARVMSK--LKTDTELRFITFGAEENGLIGS 279 (421)
T ss_dssp EEEEEEEEECCCSSTTCCCCEEEEEEECCCCTTCCCTTTTHHHHHHHHHHHHHHTT--SCCSSEEEEEEESSSTTTSHHH
T ss_pred cccceEEEecCcccCCCCCCEEEEecccccCCCCCCCCCCcHhHHHHHHHHHHHhc--cCCCceEEEEEECCccccchhH
Confidence 57899999998521012678999999999999999999999999999999999997 4678999999999999999999
Q ss_pred HHHHhcCC--ccCCccEEEEeecCcCCCC-eeEEEeCC-CHHHHHHHH----HHccCCCCcccccccccCCCCCCCCchH
Q 002959 241 HSFVTQHP--WSTTIRVAVDLEAMGIGGR-SALFQAGP-NLWAVENFA----AVAKYPSGQIIGQDLFASGVFETATDFQ 312 (862)
Q Consensus 241 ~~fv~~h~--~~~~v~a~iNLD~~G~gG~-~~lfq~g~-~~~li~~~~----~~a~~p~~~~l~~eif~~g~ips~TD~~ 312 (862)
+.|+++++ +.+++.++||+|++|.++. ......+. .+.+...+. +....| . .. ...+.|||.
T Consensus 280 ~~~~~~~~~~~~~~~~~~in~D~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~---~~-----~~~~~SD~~ 349 (421)
T 2ek8_A 280 KKYAASLSEDEIKRTIGMFQLDMVGSKDAGDLIMYTIDGKKNRVTDLGAAASSRLSGV--L---PY-----GQEGRSDHE 349 (421)
T ss_dssp HHHHTTCCHHHHHHEEEEEEECSCCBTTSCEEEEEETTSCCCHHHHHHHHHHHHHTSC--C---CE-----EECCSSTHH
T ss_pred HHHHHhCccchhhcEEEEEEecccCCCCCcceEEecCCCccccchhhHHHHHHhcCCC--C---CC-----CCCCCCccH
Confidence 99998775 3568999999999998775 33333332 112222221 111122 0 01 123579999
Q ss_pred HHhhhcCCeEEEEeecCCCCCCCCcCCccCCCChhHHHHHHHHHHHHHHHHhcCCCCCCC
Q 002959 313 VYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASSTSIPKG 372 (862)
Q Consensus 313 ~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d~Id~~sLq~~g~~~l~ll~~La~~~~l~~~ 372 (862)
+|.+ .|||++.+......++|||++||++++|.+.++++++.+..+++.|++.+.+|.+
T Consensus 350 ~F~~-~GIP~~~~~~~~~~~~yHt~~Dt~~~i~~~~l~~~~~~~~~~~~~la~~~~~p~~ 408 (421)
T 2ek8_A 350 SFHA-LGIPAALFIHAPVEPWYHTPNDTLDKISKEKLDNVADIVGSAVYQAARPGELVIE 408 (421)
T ss_dssp HHHT-TTCCEEEEEEESCCTTTTSTTCCGGGBCHHHHHHHHHHHHHHHHHHHSSSCCCCC
T ss_pred HHHH-CCCCEEEEECCcCCCCCCCcccchhhCCHHHHHHHHHHHHHHHHHHhCCCccCCC
Confidence 9998 9999998764445567999999999999999999999999999999999988754
No 14
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum}
Probab=99.82 E-value=2.4e-19 Score=199.26 Aligned_cols=178 Identities=19% Similarity=0.215 Sum_probs=136.6
Q ss_pred EcCCCCCCCCCCeEEEEeecCccCCCCCCCCChhHHHHHHHHHHHHHhccCCCCccEEEEEeCCcCCCCcchHHHHhcCC
Q 002959 169 ILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHP 248 (862)
Q Consensus 169 i~g~~~~~~~~~~Vll~AH~Dsv~~spGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~Flf~~aEE~gl~GS~~fv~~h~ 248 (862)
++|+ +++.|+++||+||.. +|+||+||+|+++|++|.|++ .++++++.|+|++ |..||..|+++|+
T Consensus 174 ipG~-----t~~~IllsaH~cHP~---~ANDNaSG~a~lleLar~l~~--~~~~~t~rFvf~p----g~iGS~~yl~~~~ 239 (435)
T 3k9t_A 174 IRGE-----LEEEILLTTYTCHPS---MCNDNLSGVALITFIAKALSK--LKTKYSYRFLFAP----ETIGSITWLSRNE 239 (435)
T ss_dssp ECCS-----SSCEEEEEEECCCCS---CTTTTHHHHHHHHHHHHHHTT--SCCSSEEEEEEEC----TTHHHHHHHHHCG
T ss_pred ecCC-----CCCEEEEEEEcCCCC---CCCccchHHHHHHHHHHHHhc--CCCCceEEEEEcC----ccHHHHHHHHhCh
Confidence 5774 458899999999843 699999999999999999986 4689999999998 6899999998886
Q ss_pred c-cCCccEEEEeecCcCCCCeeEEEeCC-CHHHHHHHHH-HccCCCCcccccccccCCCCCCCCchHHHhhhcC--CeEE
Q 002959 249 W-STTIRVAVDLEAMGIGGRSALFQAGP-NLWAVENFAA-VAKYPSGQIIGQDLFASGVFETATDFQVYTEVAG--LSGL 323 (862)
Q Consensus 249 ~-~~~v~a~iNLD~~G~gG~~~lfq~g~-~~~li~~~~~-~a~~p~~~~l~~eif~~g~ips~TD~~~F~~~~G--IPgl 323 (862)
. .+++++.+||||+|.++... +..+. .+++++...+ +.++.....-..+ | .+.++||++|.+ .| ||.+
T Consensus 240 ~~l~~i~a~lnLDmVGd~~~~~-y~~sr~g~~~~d~~~~~vl~~~~~~~~~~~-f----~~~GSDh~qF~s-pG~dIPv~ 312 (435)
T 3k9t_A 240 DKLKNIKMGLVATCVGDAGIKN-YKRTKFGDAEIDKIVEKVLMHCGSEYYVAD-F----FPWGSDERQFSS-PGINLSVG 312 (435)
T ss_dssp GGGGGEEEEEECCSCCSSSCEE-EECCTTSSSHHHHHHHHHHHHSSSCEEEEC-C----CSCSSTHHHHTS-TTTCCCEE
T ss_pred HhhhceEEEEEEEEecCCCCce-eecCCCCChHHHHHHHHHHhhcCCCCceec-C----CCCCCcchhHhh-CCCCCCEE
Confidence 4 46899999999999987543 44222 3344443332 2222111100111 2 345799999999 88 9999
Q ss_pred EEeecCC-CCCCCCcCCccCCCChhHHHHHHHHHHHHHHHHhcCC
Q 002959 324 DFAYTDK-SAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASST 367 (862)
Q Consensus 324 d~a~~~~-~~~YHT~~Dt~d~Id~~sLq~~g~~~l~ll~~La~~~ 367 (862)
.+.-... .+.|||+.||+++|+++.|+...+.++..+..|-+..
T Consensus 313 ~~~r~~~~~peYHTs~Dtld~ISpe~L~~s~~iv~~~i~~Le~n~ 357 (435)
T 3k9t_A 313 SLMRSCYGFDGYHTSADNLCYMNKDGLADSYKTYLEVIYTIENNR 357 (435)
T ss_dssp EEESSCTTCTTTTBTTSSGGGCCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred EEecCCCCCcccCCCcCChhhCCHHHHHHHHHHHHHHHHHhhccc
Confidence 8875322 5679999999999999999999999999999888764
No 15
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=99.71 E-value=1.2e-16 Score=170.43 Aligned_cols=231 Identities=17% Similarity=0.171 Sum_probs=160.3
Q ss_pred HHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEEEeccCCCcccccccccCccccccccceEE
Q 002959 87 LEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIV 166 (862)
Q Consensus 87 erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~lg~~~~~~~~ve~d~~~~~~g~~~~~g~~~~~~~~~Y~~~~NVi 166 (862)
+++.+.+++|.++ |.+ |..+..+.+||.++|+++|. +++.+ . ..+..|++
T Consensus 6 ~~~~~~l~~lv~i-ps~--s~~e~~~~~~l~~~l~~~G~------~~~~~--~-------------------~~~~~nv~ 55 (269)
T 4h2k_A 6 EKVVSLAQDLIRR-PSI--SPNDEGCQQIIAERLEKLGF------QIEWM--P-------------------FNDTLNLW 55 (269)
T ss_dssp HHHHHHHHHHHTS-CCB--TTCCTTHHHHHHHHHHTTTC------EEEEC--C-------------------BTTBCEEE
T ss_pred HHHHHHHHHHhCC-CCC--CCCcHHHHHHHHHHHHHcCC------eEEEE--E-------------------cCCceEEE
Confidence 5678889999986 333 33345689999999999983 33331 1 01467999
Q ss_pred EEEcCCCCCCCCCCeEEEEeecCccCCC---------------------CCCCCChhHHHHHHHHHHHHHhccCCCCccE
Q 002959 167 LRILPKYASEAGENAILVSSHIDTVSAG---------------------EGAGDCSSCVAVMLELARVMSQWAHEFKNAV 225 (862)
Q Consensus 167 ~~i~g~~~~~~~~~~Vll~AH~Dsv~~s---------------------pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I 225 (862)
+++ |+ +.+.|++.+|+|+||.+ +|+.||++|++++|+++|.|.+.+.+++++|
T Consensus 56 a~~-g~-----~~~~i~l~~H~D~vp~~~~~~w~~~pf~~~~~~g~~~grG~~D~k~g~a~~l~a~~~l~~~~~~~~~~i 129 (269)
T 4h2k_A 56 AKH-GT-----SEPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTI 129 (269)
T ss_dssp EEE-CS-----SSCEEEEEEECCBCCCCCGGGCSSCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEE
T ss_pred EEe-CC-----CCCEEEEEeeecccCCCCcccccCCCCCeEEECCEEEeCCcccChHHHHHHHHHHHHHHHhCCCCCccE
Confidence 988 53 24689999999999853 6999999999999999999998777788999
Q ss_pred EEEEeCCcCCCCc-chHHHHhcCCc-cCCccEEEEeecCcCC--CCeeE-------EEeCCCHHHHHHHHHHccCCCCcc
Q 002959 226 IFLFNTGEEEGLN-GAHSFVTQHPW-STTIRVAVDLEAMGIG--GRSAL-------FQAGPNLWAVENFAAVAKYPSGQI 294 (862)
Q Consensus 226 ~Flf~~aEE~gl~-GS~~fv~~h~~-~~~v~a~iNLD~~G~g--G~~~l-------fq~g~~~~li~~~~~~a~~p~~~~ 294 (862)
+|+|+.+||.|.. ||+.+++.... ..+..++|+.|..+.. |.... +.+ .+..+++...++++.-.+..
T Consensus 130 ~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~~d~~i~~Ept~~~~~~~~i~~g~~G~G~~~-~~~~l~~~l~~aa~~~~gi~ 208 (269)
T 4h2k_A 130 ALLITSDEEATAKDGTIHVVETLMARDEKITYCMVGEPSSAKNLGDVVKNGRRGGGFLT-KPGKLLDSITSAIEETIGIT 208 (269)
T ss_dssp EEEEESCSSSCCTTSHHHHHHHHHHTTCCCCEEEECCCCBSSSTTSEEECSCTTCC-------HHHHHHHHHHHHHHSCC
T ss_pred EEEEEeccccCcccCHHHHHHHHHhcCCCCCEEEEECCCCCCcCCceeEEecccccccC-CCcHHHHHHHHHHHHHhCCC
Confidence 9999999999984 99999864322 3567899999976532 11110 111 12346665555432101110
Q ss_pred cccccccCCCCCCCCchHHHhhhcCCeEEEEeecCCCCCCCCcCCccCCCChhHHHHHHHHHHHHHHHHhc
Q 002959 295 IGQDLFASGVFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTAS 365 (862)
Q Consensus 295 l~~eif~~g~ips~TD~~~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d~Id~~sLq~~g~~~l~ll~~La~ 365 (862)
..... ..+.||.+.+.. .|+|.+.+.-.. ..+||+.+ .++.+.+++..+.+..+++.|.+
T Consensus 209 --~~~~~---~gggtDa~~~~~-~g~p~~~~~~~~--~~~Hs~~E---~v~~~d~~~~~~ll~~~l~~l~~ 268 (269)
T 4h2k_A 209 --PKAET---GGGTSDGRFIAL-MGAEVVEFGPLN--STIHKVNE---CVSVEDLGKCGEIYHKMLVNLLD 268 (269)
T ss_dssp --CEEEC---C--CHHHHHHHT-TTCEEEECCSBC--TTTTSTTC---EEEHHHHHHHHHHHHHHHHHHC-
T ss_pred --CEEec---CCCCchHHHHHh-hCCCEEEEEeCC--CCCcCCcc---cccHHHHHHHHHHHHHHHHHHhh
Confidence 11111 235899999986 899998875544 34699885 67888899999999999888764
No 16
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=99.71 E-value=7e-17 Score=172.08 Aligned_cols=232 Identities=16% Similarity=0.165 Sum_probs=161.8
Q ss_pred HHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEEEeccCCCcccccccccCccccccccceEE
Q 002959 87 LEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIV 166 (862)
Q Consensus 87 erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~lg~~~~~~~~ve~d~~~~~~g~~~~~g~~~~~~~~~Y~~~~NVi 166 (862)
+++.+.+++|.++ |.+.+ .+..+.+||.++|+++|. +++.+. +.+..|++
T Consensus 6 ~~~~~~l~~lv~i-ps~s~--~e~~~~~~l~~~l~~~G~------~~~~~~---------------------~~~~~nv~ 55 (268)
T 3t68_A 6 SPVLALAKELISR-QSVTP--ADAGCQDLMIERLKALGF------EIESMV---------------------FEDTTNFW 55 (268)
T ss_dssp CHHHHHHHHHHTS-CCBTT--CCTTHHHHHHHHHHHTTC------EECCCE---------------------ETTEEC-C
T ss_pred HHHHHHHHHHhCC-CCCCC--CchHHHHHHHHHHHHCCC------eEEEEe---------------------cCCccEEE
Confidence 5778999999996 43333 334689999999999983 222210 01357899
Q ss_pred EEEcCCCCCCCCCCeEEEEeecCccCCC---------------------CCCCCChhHHHHHHHHHHHHHhccCCCCccE
Q 002959 167 LRILPKYASEAGENAILVSSHIDTVSAG---------------------EGAGDCSSCVAVMLELARVMSQWAHEFKNAV 225 (862)
Q Consensus 167 ~~i~g~~~~~~~~~~Vll~AH~Dsv~~s---------------------pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I 225 (862)
+++ |+ +.+.|++.+|+|+||.+ +|+.||++|++++|++++.|++.+.+++++|
T Consensus 56 a~~-g~-----~~~~i~l~~H~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~~~~~~~v 129 (268)
T 3t68_A 56 ARR-GT-----QSPLFVFAGHTDVVPAGPLSQWHTPPFEPTVIDGFLHGRGAADMKGSLACMIVAVERFIAEHPDHQGSI 129 (268)
T ss_dssp EEE-CS-----SSCEEEEEEECCBCCCCCGGGCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEE
T ss_pred EEe-CC-----CCCeEEEEccccccCCCCcccCCCCCCccEEECCEEEecCcccchHHHHHHHHHHHHHHHhCCCCCCcE
Confidence 988 53 24689999999999853 6999999999999999999998777788999
Q ss_pred EEEEeCCcCCCC-cchHHHHhcCC-ccCCccEEEEeecCcCC--CCee-EEEeC-----CCHHHHHHHHHHccCCCCccc
Q 002959 226 IFLFNTGEEEGL-NGAHSFVTQHP-WSTTIRVAVDLEAMGIG--GRSA-LFQAG-----PNLWAVENFAAVAKYPSGQII 295 (862)
Q Consensus 226 ~Flf~~aEE~gl-~GS~~fv~~h~-~~~~v~a~iNLD~~G~g--G~~~-lfq~g-----~~~~li~~~~~~a~~p~~~~l 295 (862)
+|+|+.+||.|. .||+.+++.+. ...+..++|++|..+.. |... .-+.| .+..+.+...++++...+..
T Consensus 130 ~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~~d~~i~~ept~~~~~~~~i~~g~~G~p~~~~~~~l~~~l~~a~~~~~gi~- 208 (268)
T 3t68_A 130 GFLITSDEEGPFINGTVRVVETLMARNELIDMCIVGEPSSTLAVGDVVKNGRRGGGFLTDTGELLAAVVAAVEEVNHQA- 208 (268)
T ss_dssp EEEEESCTTSSSCCHHHHHHHHHHHTTCCCCEEEECSCCBSSSTTSEEEECCGGGGTSCCCCHHHHHHHHHHHHHHSSC-
T ss_pred EEEEEeCCccCcccCHHHHHHHHHhcCCCCCEEEEeCCCCCccCCceeEEecCCCcccCCchHHHHHHHHHHHHHhCCC-
Confidence 999999999998 59999986532 23567899999977542 1111 11111 12336665555432211111
Q ss_pred ccccccCCCCCCCCchHHHhhhcCCeEEEEeecCCCCCCCCcCCccCCCChhHHHHHHHHHHHHHHHHhc
Q 002959 296 GQDLFASGVFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTAS 365 (862)
Q Consensus 296 ~~eif~~g~ips~TD~~~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d~Id~~sLq~~g~~~l~ll~~La~ 365 (862)
..... ..++||+..|.+ .|+|++.+.... ..+||+.+ .++...+++..+.+..+++.|.+
T Consensus 209 -~~~~~---sgggtD~~~~~~-~g~p~~~~~~~~--~~~Hs~~E---~v~~~d~~~~~~vl~~~l~~l~~ 268 (268)
T 3t68_A 209 -PALLT---TGGTSDGRFIAQ-MGAQVVELGPVN--ATIHKVNE---CVRIADLEKLTDMYQKTLNHLLG 268 (268)
T ss_dssp -CEEES---SCCCHHHHHHHH-HTCEEEECCSBC--TTTTSTTC---EEEHHHHHHHHHHHHHHHHHHHC
T ss_pred -cEEec---CccccHHHHHHh-cCCCEEEEeeCC--CCCCCccc---cccHHHHHHHHHHHHHHHHHHhC
Confidence 01111 235899999997 899998775433 34699885 66788888999999999888764
No 17
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=99.63 E-value=3e-15 Score=152.64 Aligned_cols=134 Identities=19% Similarity=0.215 Sum_probs=108.0
Q ss_pred CCCHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEEEeccCCCcccccccccCcccccccc
Q 002959 83 GFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDL 162 (862)
Q Consensus 83 ~fs~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~lg~~~~~~~~ve~d~~~~~~g~~~~~g~~~~~~~~~Y~~~ 162 (862)
.++.+++.+.|++|+++ |.+.+++++.++++|+.+++++++. +++.+... .+.
T Consensus 6 ~~~~~~~~~~l~~lv~i-~s~s~~~~e~~~~~~l~~~l~~~g~------~~~~~~~~--------------------~g~ 58 (198)
T 1q7l_A 6 PEEEHPSVTLFRQYLRI-RTVQPKPDYGAAVAFFEETARQLGL------GCQKVEVA--------------------PGY 58 (198)
T ss_dssp -CCCCHHHHHHHHHHTS-CCBTTSCCHHHHHHHHHHHHHHHTC------EEEEEEEE--------------------TTE
T ss_pred chhHHHHHHHHHHHhcC-CCCCCCcCHHHHHHHHHHHHHHCCC------eEEEEEcC--------------------CCC
Confidence 46678899999999997 4445544567899999999999983 34443211 035
Q ss_pred ceEEEEEcCCCCCCCCCCeEEEEeecCccCC---------------------CCCCCCChhHHHHHHHHHHHHHhccCCC
Q 002959 163 NHIVLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEF 221 (862)
Q Consensus 163 ~NVi~~i~g~~~~~~~~~~Vll~AH~Dsv~~---------------------spGA~Dd~sgva~~LE~ar~L~~~~~~p 221 (862)
.|++++++|+ .++.+.|++.+|+|+||. ++|+.||++|++++|++++.|.+.+.++
T Consensus 59 ~~~i~~~~g~---~~~~~~ill~aH~DtVp~~~~~w~~~pf~~~~~~~g~l~GrGa~D~K~g~a~~l~a~~~l~~~~~~~ 135 (198)
T 1q7l_A 59 VVTVLTWPGT---NPTLSSILLNSHTDVVPVFKEHWSHDPFEAFKDSEGYIYARGAQDMKCVSIQYLEAVRRLKVEGHRF 135 (198)
T ss_dssp EEEEEEECCS---STTSCEEEEEEECCBCCCCGGGCSSCTTTCCBCTTSEEECTTTTTTHHHHHHHHHHHHHHHHTTCCC
T ss_pred eEEEEEEccC---CCCCCeEEEEeeecccCCCcccCccCCCeeeEccCCEEEeCcchhchHHHHHHHHHHHHHHHcCCCC
Confidence 6999999874 233578999999999874 3789999999999999999999987788
Q ss_pred CccEEEEEeCCcCCC-CcchHHHHhc
Q 002959 222 KNAVIFLFNTGEEEG-LNGAHSFVTQ 246 (862)
Q Consensus 222 ~~~I~Flf~~aEE~g-l~GS~~fv~~ 246 (862)
+++|+|+|+.+||.| +.|++.++++
T Consensus 136 ~~~v~~~~~~~EE~g~~~Ga~~~~~~ 161 (198)
T 1q7l_A 136 PRTIHMTFVPDEEVGGHQGMELFVQR 161 (198)
T ss_dssp SSCEEEEEESCGGGTSTTTHHHHTTS
T ss_pred CCCEEEEEEcccccCccccHHHHHHh
Confidence 999999999999997 7999999854
No 18
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=99.62 E-value=6.9e-15 Score=164.04 Aligned_cols=226 Identities=18% Similarity=0.214 Sum_probs=160.6
Q ss_pred HHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEEEeccCCCcccccccccCccccccccceEE
Q 002959 87 LEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIV 166 (862)
Q Consensus 87 erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~lg~~~~~~~~ve~d~~~~~~g~~~~~g~~~~~~~~~Y~~~~NVi 166 (862)
+++.+.|++|+++ |.+.|.+ +++++||.+++++++. +++.| +..|++
T Consensus 7 ~~~~~~l~~L~~~-~s~sg~e--~~~~~~l~~~l~~~g~------~~~~d------------------------~~gnli 53 (373)
T 1vhe_A 7 DETLTMLKDLTDA-KGIPGNE--REVRQVMKSYIEPFAD------EVTTD------------------------RLGSLI 53 (373)
T ss_dssp CHHHHHHHHHHHS-CCCTTCC--HHHHHHHHHHHGGGCS------EEEEC------------------------TTCCEE
T ss_pred HHHHHHHHHHHcC-CCCCCch--HHHHHHHHHHHHhhCC------EEEEc------------------------CCCcEE
Confidence 3678899999997 5555543 5789999999999973 34332 345899
Q ss_pred EEEcCCCCCCCCCCeEEEEeecCccC------------------------------------------------------
Q 002959 167 LRILPKYASEAGENAILVSSHIDTVS------------------------------------------------------ 192 (862)
Q Consensus 167 ~~i~g~~~~~~~~~~Vll~AH~Dsv~------------------------------------------------------ 192 (862)
++++|+ ...+.|++.||+|+|+
T Consensus 54 a~~~g~----~~~~~vll~aH~D~v~~~v~~i~~~G~l~~~~~Gg~~~~~~~~~~v~v~~~~g~~~g~i~~~~~h~~~~~ 129 (373)
T 1vhe_A 54 AKKTGA----ENGPKIMIAGHLDEVGFMVTQITDKGFIRFQTVGGWWAQVMLAQRVTIVTKKGEITGVIGSKPPHILSPE 129 (373)
T ss_dssp EEEESS----TTSCEEEEEEECCCCEEEEEEECTTSCEEEEEESCCCGGGTTTCEEEEEETTEEEEEEEECCCGGGSCTT
T ss_pred EEecCC----CCCceEEEEecCCcCCEEEEEECCCCeEEEEEeCCcchhhccCCEEEEEeCCCcEEEEEcCCCcccCchh
Confidence 998874 2346899999999997
Q ss_pred ---------------------------CCCC---------------------CCCChhHHHHHHHHHHHHHhccCCCCcc
Q 002959 193 ---------------------------AGEG---------------------AGDCSSCVAVMLELARVMSQWAHEFKNA 224 (862)
Q Consensus 193 ---------------------------~spG---------------------A~Dd~sgva~~LE~ar~L~~~~~~p~~~ 224 (862)
..+| +.||++|+|++|+++|.|.+. .++++
T Consensus 130 ~~~~~~~~~~l~id~g~~s~~~~~~~gi~~Gd~v~~~~~~~~~~~~~~i~gr~~D~k~g~a~~l~a~~~l~~~--~~~~~ 207 (373)
T 1vhe_A 130 ARKKSVEIKDMFIDIGASSREEALEWGVLPGDMIVPHFEFTVMNNEKFLLAKAWDNRIGCAIAIDVLRNLQNT--DHPNI 207 (373)
T ss_dssp TTTSCCCGGGCEEECSCSSHHHHHHTTCCTTCEEEECCCCEECSSTTEEEETTHHHHHHHHHHHHHHHHHHTS--CCSSE
T ss_pred hccCCCChhHeEEEecCCCHHHHHHcCCCCCCEEEEccccEEecCCCeEEeccCccHHHHHHHHHHHHHHhhc--CCCce
Confidence 1123 899999999999999999875 36799
Q ss_pred EEEEEeCCcCCCCcchHHHHhcCCccCCccEEEEeecCcCCC----------------Cee-EEEeC--CCHHHHHHHHH
Q 002959 225 VIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIGG----------------RSA-LFQAG--PNLWAVENFAA 285 (862)
Q Consensus 225 I~Flf~~aEE~gl~GS~~fv~~h~~~~~v~a~iNLD~~G~gG----------------~~~-lfq~g--~~~~li~~~~~ 285 (862)
|+|+|+++||.|+.|++.+... .+..++|++|+.+.++ ... .+..+ .++.+++...+
T Consensus 208 v~~~~~~~EE~G~~G~~~~~~~----~~~d~~i~~d~~~~~~~~g~~~~~~~~~lg~G~~i~~~~~~~~~~~~l~~~l~~ 283 (373)
T 1vhe_A 208 VYGVGTVQEEVGLRGAKTAAHT----IQPDIAFGVDVGIAGDTPGISEKEAQSKMGKGPQIIVYDASMVSHKGLRDAVVA 283 (373)
T ss_dssp EEEEEESCCTTTSHHHHHHHHH----HCCSEEEEEEEEECCCSTTCCTTTCCCCTTSCCEEEEEETTEECCHHHHHHHHH
T ss_pred EEEEEECCcccChhhHHHHhcc----cCCCEEEEEeccccCCCCCCcccccccccCCCceEEEeCCCCCCCHHHHHHHHH
Confidence 9999999999999999988632 2346889999876432 211 11111 25667776655
Q ss_pred HccCCCCcccccccccCCCCCCCCchHHH--hhhcCCeEEEEeecCCCCCCCCcCCccCCCChhHHHHHHHHHHHHHHHH
Q 002959 286 VAKYPSGQIIGQDLFASGVFETATDFQVY--TEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQT 363 (862)
Q Consensus 286 ~a~~p~~~~l~~eif~~g~ips~TD~~~F--~~~~GIPgld~a~~~~~~~YHT~~Dt~d~Id~~sLq~~g~~~l~ll~~L 363 (862)
+++.. +.....+.. ....||...| .. .|+|.+++.... ..+||+. |.++.+.+++..+.+..++..+
T Consensus 284 ~a~~~-gi~~~~~~~----~~ggtDa~~~~~~~-~GiPtv~lg~~~--~~~Hs~~---E~v~~~dl~~~~~ll~~~l~~l 352 (373)
T 1vhe_A 284 TAEEA-GIPYQFDAI----AGGGTDSGAIHLTA-NGVPALSITIAT--RYIHTHA---AMLHRDDYENAVKLITEVIKKL 352 (373)
T ss_dssp HHHHH-TCCCEEEEE----TTCCCTHHHHTTST-TCCCEEEEEEEE--BSTTSSC---EEEEHHHHHHHHHHHHHHHHHC
T ss_pred HHHHc-CCCeEEecC----CCCCccHHHHHHhC-CCCcEEEEcccc--ccCCChh---heecHHHHHHHHHHHHHHHHHh
Confidence 44211 111111122 2367999999 44 799999875432 2379974 6788999999999999999887
Q ss_pred hcC
Q 002959 364 ASS 366 (862)
Q Consensus 364 a~~ 366 (862)
++.
T Consensus 353 ~~~ 355 (373)
T 1vhe_A 353 DRK 355 (373)
T ss_dssp CHH
T ss_pred cHH
Confidence 654
No 19
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=99.60 E-value=1.2e-14 Score=160.74 Aligned_cols=224 Identities=15% Similarity=0.237 Sum_probs=146.1
Q ss_pred CCHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEEEeccCCCcccccccccCccccccccc
Q 002959 84 FSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLN 163 (862)
Q Consensus 84 fs~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~lg~~~~~~~~ve~d~~~~~~g~~~~~g~~~~~~~~~Y~~~~ 163 (862)
.+.+++.+.|++|+++ |.+.|.+ +.+++|+.+++++++. +++.| +..
T Consensus 3 ~~~~~~~~~l~~lv~i-~s~s~~e--~~~~~~l~~~l~~~g~------~~~~d------------------------~~g 49 (349)
T 2gre_A 3 HHTKETMELIKELVSI-PSPSGNT--AKIINFIENYVSEWNV------ETKRN------------------------NKG 49 (349)
T ss_dssp CHHHHHHHHHHHHHTS-CCBTTCC--HHHHHHHHHHTTTSSS------EEEEC------------------------SSS
T ss_pred ccHHHHHHHHHHHHhC-CCCCccH--HHHHHHHHHHHHHhCC------EEEEe------------------------cCC
Confidence 3467889999999997 4454443 4688999999999873 34332 245
Q ss_pred eEEEEEcCCCCCCCCCCeEEEEeecCccC----------------C----------------------------------
Q 002959 164 HIVLRILPKYASEAGENAILVSSHIDTVS----------------A---------------------------------- 193 (862)
Q Consensus 164 NVi~~i~g~~~~~~~~~~Vll~AH~Dsv~----------------~---------------------------------- 193 (862)
|++++++|+ .+.+.|++.+|+|+|+ .
T Consensus 50 nl~a~~~g~----~~~~~ill~~H~Dtv~~~v~~i~~~G~l~~~~~Gg~~~~~~~~~~v~i~~~~g~~~~g~i~~~~~~~ 125 (349)
T 2gre_A 50 ALILTVKGK----NDAQHRLLTAHVDTLGAMVKEIKPDGRLSLSMIGGFRWNSVEGEYCEIETSSGKTYTGTILMHQTSV 125 (349)
T ss_dssp CEEEEECCS----EEEEEEEEEEECCBCEEEEEEECTTSCEEEEEESSCCGGGTTTCEEEEECTTSCEEEEEEECC----
T ss_pred cEEEEecCC----CCCceEEEEecccccceeEEEECCCCeEEEEecCCCccccccCcEEEEEcCCCCEEEEEEeCCCCCc
Confidence 899999773 2346799999999983 0
Q ss_pred -----------------------------------CC---------------C-----CCCChhHHHHHHHHHHHHHhcc
Q 002959 194 -----------------------------------GE---------------G-----AGDCSSCVAVMLELARVMSQWA 218 (862)
Q Consensus 194 -----------------------------------sp---------------G-----A~Dd~sgva~~LE~ar~L~~~~ 218 (862)
.+ | +.||++|++++|++++.|.+.+
T Consensus 126 h~~~~~~~~~~~~~~l~~~id~g~~~~~~~~~~gi~~gd~v~~~~~~~~~~~~~i~gr~~D~k~g~a~~l~a~~~l~~~~ 205 (349)
T 2gre_A 126 HVYKDAGEAKRDEKNIEVRIDERVFSADEVRELGIEVGDFVSFDPRVQITESGYIKSRHLDDKVSVAILLKLIKRLQDEN 205 (349)
T ss_dssp ---------------CEEEESSCCCSHHHHHHTTCCTTCEEEECCCCEECTTSEEEESCCTTHHHHHHHHHHHHHHHHHT
T ss_pred cccchhccCCCCHHHceEEeccCCCCHHHHHHcCCCCCCEEEEccccEEccCCeEEEeeccchHHHHHHHHHHHHHHhcc
Confidence 00 1 6999999999999999999877
Q ss_pred CCCCccEEEEEeCCcCCCCcchHHHHhcCCccCCccEEEEeecCcCCC-C-----eeE--EE--eCC-CHHHHHHHHHHc
Q 002959 219 HEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIGG-R-----SAL--FQ--AGP-NLWAVENFAAVA 287 (862)
Q Consensus 219 ~~p~~~I~Flf~~aEE~gl~GS~~fv~~h~~~~~v~a~iNLD~~G~gG-~-----~~l--fq--~g~-~~~li~~~~~~a 287 (862)
.+++++|+|+|+.+||.|+.|++.+ ..+..++|++|+.+.++ + ... +. .++ ++.+.+.+++++
T Consensus 206 ~~~~~~i~~~~~~~EE~G~~g~~~~------~~~~~~~i~~D~~~~~~~p~~~~~g~~i~~~~~~~~~~~~l~~~l~~~a 279 (349)
T 2gre_A 206 VTLPYTTHFLISNNEEIGYGGNSNI------PEETVEYLAVDMGALGDGQASDEYTVSICAKDSSGPYHYALRKHLVELA 279 (349)
T ss_dssp CCCSEEEEEEEESCC----CCCCCC------CTTEEEEEEECCCCCSCC--CCTTSEEEEEEETTEECCHHHHHHHHHHH
T ss_pred CCCCceEEEEEECcccCCchhhccc------ccCCCEEEEEecccccCCCCCCCCceEEEEccCCCCCCHHHHHHHHHHH
Confidence 7788999999999999999999865 24578999999988753 1 111 11 122 677777766554
Q ss_pred cCCCCcccccccccCCCCCCCCchHHHhh-hcCCeEEEEeecCCCCCCCCcCCccCCCChhHHHHHHHHHHHHHH
Q 002959 288 KYPSGQIIGQDLFASGVFETATDFQVYTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLL 361 (862)
Q Consensus 288 ~~p~~~~l~~eif~~g~ips~TD~~~F~~-~~GIPgld~a~~~~~~~YHT~~Dt~d~Id~~sLq~~g~~~l~ll~ 361 (862)
+.. +.....+.. ...+||+..|.. ..|+|.+++.. ... .+|| .|.++...+.+..+.+..++.
T Consensus 280 ~~~-gi~~q~~~~----~ggGsDa~~~~~~~~GiPt~~lg~-~~~-~~Hs----~E~~~~~dl~~~~~ll~~~l~ 343 (349)
T 2gre_A 280 KTN-HIEYKVDIY----PYYGSDASAAIRAGFDVKHALIGA-GID-SSHA----FERTHESSIAHTEALVYAYVM 343 (349)
T ss_dssp HHH-TCCEEEEEC----SCC--------CCSSSCEEEEEEE-CCB-STTS----SEEEEHHHHHHHHHHHHHHHH
T ss_pred HHc-CCCcEEecc----CCCCccHHHHHHhCCCCcEEEecc-Ccc-cccc----ceeccHHHHHHHHHHHHHHHh
Confidence 321 211111122 235799988842 37999997753 333 3787 567778888887777666654
No 20
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=99.60 E-value=1.7e-14 Score=159.65 Aligned_cols=220 Identities=17% Similarity=0.194 Sum_probs=157.5
Q ss_pred HHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEEEeccCCCcccccccccCccccccccceEEEE
Q 002959 89 AMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLR 168 (862)
Q Consensus 89 A~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~lg~~~~~~~~ve~d~~~~~~g~~~~~g~~~~~~~~~Y~~~~NVi~~ 168 (862)
..+.|++|+++ |.+.|.++ +++++||.+++++++. +++.| +..|++++
T Consensus 8 ~~~~l~~L~~~-~s~sg~e~-~~~~~~l~~~l~~~g~------~~~~d------------------------~~gnlia~ 55 (353)
T 1y0y_A 8 DYELLKKVVEA-PGVSGYEF-LGIRDVVIEEIKDYVD------EVKVD------------------------KLGNVIAH 55 (353)
T ss_dssp CHHHHHHHHHS-CCBTTCGG-GTHHHHHHHHHGGGSS------EEEEC------------------------TTCCEEEE
T ss_pred HHHHHHHHHhC-CCCCccch-HHHHHHHHHHHHhhCC------eEEEc------------------------CCCCEEEE
Confidence 46789999996 55656543 5789999999999973 34332 35689998
Q ss_pred EcCCCCCCCCCCeEEEEeecCccC--------------------------------------------------------
Q 002959 169 ILPKYASEAGENAILVSSHIDTVS-------------------------------------------------------- 192 (862)
Q Consensus 169 i~g~~~~~~~~~~Vll~AH~Dsv~-------------------------------------------------------- 192 (862)
++|+ .+.|+++||+|+|+
T Consensus 56 ~~g~------~~~i~l~aH~D~v~~~v~~i~~~G~l~~~~~Gg~~~~~~~~~~v~v~~~~g~~~~g~i~~~~~h~~~~~~ 129 (353)
T 1y0y_A 56 KKGE------GPKVMIAAHMDQIGLMVTHIEKNGFLRVAPIGGVDPKTLIAQRFKVWIDKGKFIYGVGASVPPHIQKPED 129 (353)
T ss_dssp ECCS------SCEEEEEEECCBCEEEEEEECTTSCEEEEEESSCCGGGTTTCEEEEEEETTEEEEEEEEC----------
T ss_pred ecCC------CccEEEEeccCcccEEEEEECCCceEEEEEeCCcchhhccCCEEEEEeCCCcEEEEEEeCCCcccCchhh
Confidence 8652 36899999999995
Q ss_pred --------------------------CCCC--------------------CCCChhHHHHHHHHHHHHHhccCCCCccEE
Q 002959 193 --------------------------AGEG--------------------AGDCSSCVAVMLELARVMSQWAHEFKNAVI 226 (862)
Q Consensus 193 --------------------------~spG--------------------A~Dd~sgva~~LE~ar~L~~~~~~p~~~I~ 226 (862)
..+| |.||++|++++|++++.|++ ++++|+
T Consensus 130 ~~~~~~~~~l~~d~g~~~~~~~~~~gi~~Gd~v~~~~~~~~~~~~~i~gra~D~k~g~a~~l~a~~~l~~----~~~~i~ 205 (353)
T 1y0y_A 130 RKKAPDWDQIFIDIGAESKEEAEDMGVKIGTVITWDGRLERLGKHRFVSIAFDDRIAVYTILEVAKQLKD----AKADVY 205 (353)
T ss_dssp ---CCCGGGCEEECSCSSHHHHHHTTCCTTCEEEECCCCEEETTTEEEETTHHHHHHHHHHHHHHHHCCS----CSSEEE
T ss_pred ccCCCChHHeEEEeCCCCHHHHHHcCCCCCCEEEeccCcEEecCCeEEeccCccHHHHHHHHHHHHHhhc----CCCeEE
Confidence 2345 69999999999999999864 678999
Q ss_pred EEEeCCcCCCCcchHHHHhcCCccCCccEEEEeecCcCCCC----------------eeEE-E--eCCCHHHHHHHHHHc
Q 002959 227 FLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIGGR----------------SALF-Q--AGPNLWAVENFAAVA 287 (862)
Q Consensus 227 Flf~~aEE~gl~GS~~fv~~h~~~~~v~a~iNLD~~G~gG~----------------~~lf-q--~g~~~~li~~~~~~a 287 (862)
|+|+.+||.|+.||+.+... .+..++|++|+.+.++. .+-+ . ...++.+++..++++
T Consensus 206 ~~~~~~EE~g~~G~~~~~~~----~~~~~~i~~d~~~~~~~p~~~~~~g~~~lg~G~~i~~~d~~~~~~~~l~~~l~~~a 281 (353)
T 1y0y_A 206 FVATVQEEVGLRGARTSAFG----IEPDYGFAIDVTIAADIPGTPEHKQVTHLGKGTAIKIMDRSVICHPTIVRWLEELA 281 (353)
T ss_dssp EEEESCCTTTSHHHHHHHHH----HCCSEEEEEEEEECCCSTTCCGGGCCCCTTSCEEEEEEETTEECCHHHHHHHHHHH
T ss_pred EEEECCcccchhHHHHHhhc----cCCCEEEEEecccccCCCCCccccCccccCCCcEEEEeCCCCCCCHHHHHHHHHHH
Confidence 99999999999999988732 23568999998765321 0111 1 112567777766654
Q ss_pred cCCCCcccccccccCCCCCCCCchHHH--hhhcCCeEEEEeecCCCCCCCCcCCccCCCChhHHHHHHHHHHHHHHHHhc
Q 002959 288 KYPSGQIIGQDLFASGVFETATDFQVY--TEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTAS 365 (862)
Q Consensus 288 ~~p~~~~l~~eif~~g~ips~TD~~~F--~~~~GIPgld~a~~~~~~~YHT~~Dt~d~Id~~sLq~~g~~~l~ll~~La~ 365 (862)
+.. +.....+.. .+..||...| .. .|+|.+++... . ..+||+. |.++.+.+.+..+.+..++..+++
T Consensus 282 ~~~-gi~~~~~~~----~~ggsDa~~~~~~~-~GiPtv~lg~~-~-~~~Hs~~---E~v~~~dl~~~~~ll~~~l~~l~~ 350 (353)
T 1y0y_A 282 KKH-EIPYQLEIL----LGGGTDAGAIHLTK-AGVPTGALSVP-A-RYIHSNT---EVVDERDVDATVELMTKALENIHE 350 (353)
T ss_dssp HHT-TCCEEEEEC----SSCCCTHHHHTTST-TCCCEEEEEEE-E-BSCSSSC---EEEEHHHHHHHHHHHHHHHHHGGG
T ss_pred HHc-CCCEEEeec----CCCCchHHHHHHhC-CCCcEEEEccc-c-cccCCHH---HhcCHHHHHHHHHHHHHHHHhhhh
Confidence 321 221111111 3468999999 44 79999987643 2 3489975 677888899999999999988865
No 21
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=99.59 E-value=1.5e-14 Score=158.48 Aligned_cols=215 Identities=19% Similarity=0.251 Sum_probs=153.0
Q ss_pred HHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEEEeccCCCcccccccccCccccccccceEEEE
Q 002959 89 AMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLR 168 (862)
Q Consensus 89 A~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~lg~~~~~~~~ve~d~~~~~~g~~~~~g~~~~~~~~~Y~~~~NVi~~ 168 (862)
..+.|++|+++ |.+.|.+ +++++||.+++++++. ++.| +..|++++
T Consensus 4 ~~~~l~~l~~~-~s~sg~e--~~~~~~l~~~l~~~g~-------~~~d------------------------~~gnlia~ 49 (332)
T 2wyr_A 4 MIEKLKKFTQI-PGISGYE--ERIREEIIREIKDFAD-------YKVD------------------------AIGNLIVE 49 (332)
T ss_dssp HHHHHHHHHTS-CCBTTCC--HHHHHHHHHHHTTTCC-------CEEC------------------------TTCCEEEE
T ss_pred HHHHHHHHHcC-CCCCCcH--HHHHHHHHHHHhhcCc-------EEEc------------------------CCCeEEEE
Confidence 56789999997 5555543 4789999999999872 3321 45689998
Q ss_pred EcCCCCCCCCCCeEEEEeecCccC----------------C---------------------------------------
Q 002959 169 ILPKYASEAGENAILVSSHIDTVS----------------A--------------------------------------- 193 (862)
Q Consensus 169 i~g~~~~~~~~~~Vll~AH~Dsv~----------------~--------------------------------------- 193 (862)
++|. .+.|+++||+|+|+ .
T Consensus 50 ~~~~------~~~i~l~aH~D~v~~~v~~i~~~G~l~~~~~Gg~~~~~~~~~~v~v~~~~g~~~g~i~~~~~h~~~~~~~ 123 (332)
T 2wyr_A 50 LGEG------EERILFMAHMDEIGLLITGITDEGKLRFRKVGGIDDRLLYGRHVNVVTEKGILDGVIGATPPHLSLERDK 123 (332)
T ss_dssp EESS------SEEEEEEEECCBCEEEEEEECTTSCEEEEEESCCCGGGTTTEEEEEECSSCEEEEEECCCCTTC-----C
T ss_pred ecCC------CceEEEEeccCcccEEEEEECCCCeEEEEecCCcChhhccCCEEEEEcCCCCEEEEEcCCCcccChhhhc
Confidence 8751 36799999999994 1
Q ss_pred ------------------------CCC--------------------CCCChhHHHHHHHHHHHHHhccCCCCccEEEEE
Q 002959 194 ------------------------GEG--------------------AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLF 229 (862)
Q Consensus 194 ------------------------spG--------------------A~Dd~sgva~~LE~ar~L~~~~~~p~~~I~Flf 229 (862)
.+| +.||++|++++|+++|.|++.+ ++++|+|+|
T Consensus 124 ~~~~~~~~~id~g~~~~~~~~~~i~~Gd~~~~~~~~~~~~~~~i~gra~D~k~g~a~~l~a~~~l~~~~--~~~~i~~~~ 201 (332)
T 2wyr_A 124 SVIPWYDLVIDIGAESKEEALELVKPLDFAVFKKHFSVLNGKYVSTRGLDDRFGVVALIEAIKDLVDHE--LEGKVIFAF 201 (332)
T ss_dssp CCCCGGGCCBBCSCSSHHHHHHHCCTTCEEEECCCCEEETTTEEECTTHHHHHHHHHHHHHHHTTTTSC--CSSEEEEEE
T ss_pred cCCChHHEEEEeCCCCHHHHHhhCCCCCEEEEccccEEecCCeEEcccCCcHHHHHHHHHHHHHHhhcC--CCceEEEEE
Confidence 012 6999999999999999998754 679999999
Q ss_pred eCCcCCCCcchHHHHhcCCccCCccEEEEeecCcCC-----------CCeeEEE---eCCCHHHHHHHHHHccCCCCccc
Q 002959 230 NTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIG-----------GRSALFQ---AGPNLWAVENFAAVAKYPSGQII 295 (862)
Q Consensus 230 ~~aEE~gl~GS~~fv~~h~~~~~v~a~iNLD~~G~g-----------G~~~lfq---~g~~~~li~~~~~~a~~p~~~~l 295 (862)
+++||.|+.|++.++.. .+..++|++|+.+.. |..+-+. ...++.+++...++++.. +...
T Consensus 202 ~~~EE~G~~G~~~~~~~----~~~~~~i~~d~~~~~~~p~~~~~lg~G~~i~~~d~~~~~~~~l~~~l~~~~~~~-gi~~ 276 (332)
T 2wyr_A 202 TVQEEVGLKGAKFLANH----YYPQYAFAIDSFACCSPLTGDVKLGKGPVIRAVDNSAIYSRDLARKVWSIAEKN-GIEI 276 (332)
T ss_dssp ESCGGGTSHHHHHHTTT----CCCSEEEEECCEECCSGGGTTCCTTSCCEEEEECSSCBCCHHHHHHHHHHHHHT-TCCC
T ss_pred ECccccCcchHHHHhcc----cCCCEEEEEecccccCCCCCceeeCCCCEEEEcCCCCCCCHHHHHHHHHHHHHc-CCCe
Confidence 99999999999999732 245789999987753 2222111 112667777766654321 2111
Q ss_pred ccccccCCCCCCCCchHHHhhhcCCeEEEEeecCCCCCCCCcCCccCCCChhHHHHHHHHHHHHHHH
Q 002959 296 GQDLFASGVFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQ 362 (862)
Q Consensus 296 ~~eif~~g~ips~TD~~~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d~Id~~sLq~~g~~~l~ll~~ 362 (862)
... ..+..||...|.. |+|.+++... . ..+||+. |.++...+.+..+.+..++..
T Consensus 277 ~~~-----~~~ggtDa~~~~~--GiPtv~lg~~-~-~~~Hs~~---E~v~~~dl~~~~~ll~~~~~~ 331 (332)
T 2wyr_A 277 QIG-----VTGGGTDASAFQD--RSKTLALSVP-I-KYLHSEV---ETLHLNDLEKLVKLIEALAFE 331 (332)
T ss_dssp EEE-----ECSSCCGGGGGTT--TSEEEEEECE-E-BSCSSTT---CEEEHHHHHHHHHHHHHHHHH
T ss_pred EEe-----cCCCCchHHHHHc--CCCEEEEcCC-c-CCCCChh---hcccHHHHHHHHHHHHHHHHh
Confidence 111 1346899999986 9999987533 2 3489975 567788888888888877764
No 22
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.50 E-value=6.6e-14 Score=154.04 Aligned_cols=220 Identities=17% Similarity=0.214 Sum_probs=138.9
Q ss_pred HHHHHHccCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEEEeccCCCcccccccccCccccccccceEEEEEcC
Q 002959 92 HVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRILP 171 (862)
Q Consensus 92 ~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~lg~~~~~~~~ve~d~~~~~~g~~~~~g~~~~~~~~~Y~~~~NVi~~i~g 171 (862)
.|++|+++ |.+.|.+ +++++||.+++++++. +++.| +..|++++++|
T Consensus 3 ~l~~L~~~-~s~sg~e--~~~~~~l~~~l~~~g~------~~~~d------------------------~~gnlia~~~g 49 (340)
T 2fvg_A 3 YLKELSMM-PGVSGDE--GKVRDFIKSKIEGLVD------NLYTD------------------------VLGNLIALKRG 49 (340)
T ss_dssp CHHHHHHS-CCBTTCC--HHHHHHHHHHHGGGSS------EEEEC------------------------TTSCEEEEECC
T ss_pred HHHHHHcC-CCCCCch--HHHHHHHHHHHHhhCC------EEEEe------------------------CCCcEEEEecC
Confidence 47888886 5555544 4689999999999973 33332 24589999877
Q ss_pred CCCCCCCCCeEEEEeecCccC-----------------------------------------------------------
Q 002959 172 KYASEAGENAILVSSHIDTVS----------------------------------------------------------- 192 (862)
Q Consensus 172 ~~~~~~~~~~Vll~AH~Dsv~----------------------------------------------------------- 192 (862)
+ .+.+.|++.||+|+|+
T Consensus 50 ~----~~~~~v~l~aH~D~v~~~v~~i~~~G~l~~~~~Gg~~~~~~~~~~v~v~~~~g~i~~~~~h~~~~~~~~~~~~~~ 125 (340)
T 2fvg_A 50 R----DSSKKLLVSAHMDEVGFVVSKIEKDGKVSFLPVGGVDPRILPGKVVQVKNLKGVIGYRPIHLQRDEENTPPRFEN 125 (340)
T ss_dssp S----EEEEEEEEEEECCBCEEEEEEECTTSCEEEEEESCCCGGGCTTCEEEETTEEEEEEECC-----------CCSTT
T ss_pred C----CCCceEEEEeccCcCcEEEEEECCCCEEEEEeeCCcccccccCCEEEECcEEEEEcCCCccccchhhccCCCccc
Confidence 3 2346799999999998
Q ss_pred ----------------CCCC-------------------CCCChhHHHHHHHHHHHHHhccCCCCccEEEEEeCCcCCCC
Q 002959 193 ----------------AGEG-------------------AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGL 237 (862)
Q Consensus 193 ----------------~spG-------------------A~Dd~sgva~~LE~ar~L~~~~~~p~~~I~Flf~~aEE~gl 237 (862)
..+| +.||++|++++|+++|.|. +++++|+|+|+++||.|+
T Consensus 126 l~id~g~~s~~e~~~~i~~gd~v~~~~~~~~~~~~i~gra~D~k~g~a~~l~a~~~l~----~~~~~i~~~~~~~EE~G~ 201 (340)
T 2fvg_A 126 LRIDFGFSSADEAKKYVSIGDYVSFVSDYIEKNGRAVGKAFDDRAGCSVLIDVLESGV----SPAYDTYFVFTVQEETGL 201 (340)
T ss_dssp EEEECSCSSHHHHHTTCCTTCEEEECCCCEEETTEEEESCHHHHHHHHHHHHHHHTCC----CCSEEEEEEEECCCC---
T ss_pred EEEEeCCCCHHHHHhhCCCCCEEEEccCceeecCEEeeccCccHHHHHHHHHHHHHhh----ccCCcEEEEEEcccccch
Confidence 1114 6899999999999999986 478999999999999999
Q ss_pred cchHHHHhcCCccCCccEEEEeecCcCC---CCe-----------eEEE---eC--CCHHHHHHHHHHccCCCCcccccc
Q 002959 238 NGAHSFVTQHPWSTTIRVAVDLEAMGIG---GRS-----------ALFQ---AG--PNLWAVENFAAVAKYPSGQIIGQD 298 (862)
Q Consensus 238 ~GS~~fv~~h~~~~~v~a~iNLD~~G~g---G~~-----------~lfq---~g--~~~~li~~~~~~a~~p~~~~l~~e 298 (862)
.|++.+++. .+..++|++|+.+.+ |+. .+.. .+ .++.+.+..++.++. .+.....+
T Consensus 202 ~G~~~~~~~----~~~~~~i~~d~~~~~~~~G~~~h~~~~~~G~g~~i~~~~~~~~~~~~l~~~l~~~a~~-~gi~~~~~ 276 (340)
T 2fvg_A 202 RGSAVVVEQ----LKPTCAIVVETTTAGDNPELEERKWATHLGDGPAITFYHRGYVIPKEIFQTIVDTAKN-NDIPFQMK 276 (340)
T ss_dssp --CHHHHHH----HCCSEEEEEEEEEECSCSTTCCSSSSCCTTSCCEECSCCSSSCCCHHHHHHHHHHHHH-TTCCCEEC
T ss_pred hhhHHHhhc----cCCCEEEEEecccCCCCCCCccccCCcccCCCcEEEEeCCCCCCCHHHHHHHHHHHHH-cCCCeEEE
Confidence 999999853 234678999876532 210 0111 11 256666666554321 11111111
Q ss_pred cccCCCCCCCCchHHHhh-hcCCeEEEEeecCCCCCCCCcCCccCCCChhHHHHHHHHHHHHHHHHhcC
Q 002959 299 LFASGVFETATDFQVYTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASS 366 (862)
Q Consensus 299 if~~g~ips~TD~~~F~~-~~GIPgld~a~~~~~~~YHT~~Dt~d~Id~~sLq~~g~~~l~ll~~La~~ 366 (862)
. ..+..||...|.. ..|+|.+.+.... .+ +||+. |.++.+.+.+..+.+..+++.+.+.
T Consensus 277 ~----~~~ggtDa~~~~~~~~GiP~v~~g~~~-~~-~Hs~~---E~v~~~dl~~~~~ll~~~~~~l~~~ 336 (340)
T 2fvg_A 277 R----RTAGGTDAGRYARTAYGVPAGVISTPA-RY-IHSPN---SIIDLNDYENTKKLIKVLVEEGKIV 336 (340)
T ss_dssp C----CC-------------CCSCEEEEEEEE-EE-SSTTC---EEEEHHHHHHHHHHHHHHHHHCHHH
T ss_pred e----cCCCCccHHHHHhhCCCCcEEEecccc-cc-cCChh---hcccHHHHHHHHHHHHHHHHhcccc
Confidence 1 1346799999874 2699999775432 33 89976 4677888999999999998887653
No 23
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=99.46 E-value=1.3e-12 Score=149.50 Aligned_cols=157 Identities=13% Similarity=0.159 Sum_probs=117.3
Q ss_pred CHHHHHHHHHHHHccCCCCCCCH----HHHHHHHHHHHHHHhcccccCCcceEEEEEEeccCCCcccccccccCcccccc
Q 002959 85 SELEAMKHVKALTQLGPHAVGSD----ALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYS 160 (862)
Q Consensus 85 s~erA~~~L~~L~~igpr~~GS~----~n~~a~~yL~~~l~~lg~~~~~~~~ve~d~~~~~~g~~~~~g~~~~~~~~~Y~ 160 (862)
..+++.+.+++|.++ |.+.+.+ +..++++||.++|+++|. +++.+..... ...+ +.. ..
T Consensus 18 ~~~~~~~~l~~l~~~-ps~s~~e~~~~~~~~~~~~l~~~l~~~G~------~~~~~~~~~~----~~~~----~~~--~~ 80 (479)
T 2zog_A 18 NQDRYVKKLAEWVAI-QSVSAWPEKRGEIRRMMEVAAADVQRLGG------SVELVDIGKQ----KLPD----GSE--IP 80 (479)
T ss_dssp THHHHHHHHHHHHHS-CCBTTCGGGHHHHHHHHHHHHHHHHHTTC------EEEEECCCEE----ECTT----SCE--EE
T ss_pred hHHHHHHHHHHHhcC-CCccCCcccchHHHHHHHHHHHHHHHcCC------eEEEeecccc----ccCC----Ccc--cC
Confidence 357889999999997 4555543 346899999999999983 4444321000 0000 000 00
Q ss_pred ccceEEEEEcCCCCCCCCCCeEEEEeecCccCC---------------------CCCCCCChhHHHHHHHHHHHHHhccC
Q 002959 161 DLNHIVLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAH 219 (862)
Q Consensus 161 ~~~NVi~~i~g~~~~~~~~~~Vll~AH~Dsv~~---------------------spGA~Dd~sgva~~LE~ar~L~~~~~ 219 (862)
...||++++++. .+.+.|++.+|+|+||. ++|+.||+.|++++|++++.|++.+.
T Consensus 81 ~~~~v~a~~~~~----~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grGa~D~K~g~a~~l~a~~~l~~~~~ 156 (479)
T 2zog_A 81 LPPILLGKLGSD----PQKKTVCIYGHLDVQPAALEDGWDSEPFTLVEREGKLYGRGSTDDKGPVAGWMNALEAYQKTGQ 156 (479)
T ss_dssp CCCEEEEEECCC----TTSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEEecCC----CCCCeEEEEEecCCCCCCccccCcCCCCcceeECCEEEeeccccChHHHHHHHHHHHHHHHhCC
Confidence 127999999652 34578999999999975 37889999999999999999999877
Q ss_pred CCCccEEEEEeCCcCCCCcchHHHHhcCCc--cCCccEEEEeecC
Q 002959 220 EFKNAVIFLFNTGEEEGLNGAHSFVTQHPW--STTIRVAVDLEAM 262 (862)
Q Consensus 220 ~p~~~I~Flf~~aEE~gl~GS~~fv~~h~~--~~~v~a~iNLD~~ 262 (862)
+++++|+|+|+.+||.|..|++.+++++.. ..++.+++++|..
T Consensus 157 ~~~~~v~~~~~~~EE~g~~Ga~~~~~~~~~~~~~~~d~~i~~e~~ 201 (479)
T 2zog_A 157 EIPVNLRFCLEGMEESGSEGLDELIFAQKDKFFKDVDYVCISDNY 201 (479)
T ss_dssp CCSSEEEEEEESCGGGTCTTHHHHHHHTTTTTTTTCCEEEECCCB
T ss_pred CCCCcEEEEEecccccCCccHHHHHHhhhhhhcccCCEEEEeCCC
Confidence 888999999999999999999999977642 2467888998853
No 24
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=99.44 E-value=8.4e-13 Score=148.38 Aligned_cols=128 Identities=19% Similarity=0.185 Sum_probs=107.5
Q ss_pred CCHHHHHHHHHHHHccCC-------CCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEEEeccCCCcccccccccCcc
Q 002959 84 FSELEAMKHVKALTQLGP-------HAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKT 156 (862)
Q Consensus 84 fs~erA~~~L~~L~~igp-------r~~GS~~n~~a~~yL~~~l~~lg~~~~~~~~ve~d~~~~~~g~~~~~g~~~~~~~ 156 (862)
.+.+|+++.|++|++++. |+..|..+.++++||.++|+++| ++++.|
T Consensus 2 ~~~~~~~~~l~~l~~i~s~~~~g~~r~~~s~~e~~~~~~l~~~l~~~g------~~~~~d-------------------- 55 (408)
T 3n5f_A 2 IQGERLWQRLMELGEVGKQPSGGVTRLSFTAEERRAKDLVASYMREAG------LFVYED-------------------- 55 (408)
T ss_dssp -CHHHHHHHHHHHHTTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHHT------CEEEEC--------------------
T ss_pred CCHHHHHHHHHHHHccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHCC------CEEEEc--------------------
Confidence 367899999999999854 33458888899999999999998 234432
Q ss_pred ccccccceEEEEEcCCCCCCCCCCeEEEEeecCccCCCCCCCCChhHHHHHHHHHHHHHhccCCCCccEEEEEeCCcCC-
Q 002959 157 LIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEE- 235 (862)
Q Consensus 157 ~~Y~~~~NVi~~i~g~~~~~~~~~~Vll~AH~Dsv~~spGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~Flf~~aEE~- 235 (862)
...||+++++|+ .++.+.|++.||+|+||. .|+.|++.|++++|++++.|.+.+.+++++|.|+|+.+||.
T Consensus 56 ----~~gnv~a~~~g~---~~~~~~i~l~aH~D~v~~-~g~~d~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~~ 127 (408)
T 3n5f_A 56 ----AAGNLIGRKEGT---NPDATVVLVGSHLDSVYN-GGCFDGPLGVLAGVEVVQTMNEHGVVTHHPIEVVAFTDEEGA 127 (408)
T ss_dssp ----TTCCEEEEECCS---STTSCEEEEEEESCCCTT-BCSSTTHHHHHHHHHHHHHHHHTTCCCSSCEEEEEESCSSCT
T ss_pred ----CCCCEEEEecCC---CCCCCEEEEEecCCCCCC-CCccCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCcccc
Confidence 234999999885 233689999999999995 68999999999999999999998778999999999999996
Q ss_pred ----CCcchHHHHh
Q 002959 236 ----GLNGAHSFVT 245 (862)
Q Consensus 236 ----gl~GS~~fv~ 245 (862)
|+.||+.++.
T Consensus 128 ~~~~g~~Gs~~~~~ 141 (408)
T 3n5f_A 128 RFRFGMIGSRAMAG 141 (408)
T ss_dssp TTTCCCHHHHHHHT
T ss_pred ccCCCCcCHHHHHc
Confidence 6889999984
No 25
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=99.40 E-value=1.9e-12 Score=144.66 Aligned_cols=146 Identities=21% Similarity=0.290 Sum_probs=114.1
Q ss_pred HHHHHHHHHHHHccCCCCCCCHH-HHHHHHHHHHHHHhcccccCCcceEEEEEEeccCCCcccccccccCccccccccce
Q 002959 86 ELEAMKHVKALTQLGPHAVGSDA-LDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNH 164 (862)
Q Consensus 86 ~erA~~~L~~L~~igpr~~GS~~-n~~a~~yL~~~l~~lg~~~~~~~~ve~d~~~~~~g~~~~~g~~~~~~~~~Y~~~~N 164 (862)
.+++.+.|++|+++ |.+.+.++ ..++.+||.++|+++| ++++.+.... . ....|
T Consensus 18 ~~~~~~~l~~lv~i-~s~s~~~~~~~~~~~~l~~~l~~~G------~~~~~~~~~~-------------~-----~~~~~ 72 (393)
T 1cg2_A 18 QPAVIKTLEKLVNI-ETGTGDAEGIAAAGNFLEAELKNLG------FTVTRSKSAG-------------L-----VVGDN 72 (393)
T ss_dssp HHHHHHHHHHHHTS-CCBTTCHHHHHHHHHHHHHHHHHTT------CEEEEEECST-------------T-----CCSEE
T ss_pred HHHHHHHHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHcC------CeEEEEecCc-------------C-----CCCCe
Confidence 57889999999998 45555543 4689999999999998 3444432100 0 01359
Q ss_pred EEEEEcCCCCCCCCCCeEEEEeecCccCC-----------------CCCCCCChhHHHHHHHHHHHHHhccCCCCccEEE
Q 002959 165 IVLRILPKYASEAGENAILVSSHIDTVSA-----------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIF 227 (862)
Q Consensus 165 Vi~~i~g~~~~~~~~~~Vll~AH~Dsv~~-----------------spGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~F 227 (862)
|+++++|+ . .+.|++.+|+|+||. ++|+.|++.|++++|++++.|.+.+.+++++|+|
T Consensus 73 v~a~~~g~----~-~~~i~l~aH~D~vp~~~~~~~~Pf~~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~v~~ 147 (393)
T 1cg2_A 73 IVGKIKGR----G-GKNLLLMSHMDTVYLKGILAKAPFRVEGDKAYGPGIADDKGGNAVILHTLKLLKEYGVRDYGTITV 147 (393)
T ss_dssp EEEEEECS----S-CCCEEEEEECCBSCCTTHHHHSCCEEETTEEECTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEE
T ss_pred EEEEECCC----C-CceEEEEEecCcCCCCCccccCCeeeeCCEEEcCCcccchHHHHHHHHHHHHHHhcCCCCCCCEEE
Confidence 99999863 1 267999999999974 3899999999999999999999987777789999
Q ss_pred EEeCCcCCCCcchHHHHhcCCccCCccEEEEeecCc
Q 002959 228 LFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMG 263 (862)
Q Consensus 228 lf~~aEE~gl~GS~~fv~~h~~~~~v~a~iNLD~~G 263 (862)
+|..+||.|..|++.+++++. .++.+++++|..+
T Consensus 148 ~~~~~EE~g~~G~~~~~~~~~--~~~d~~i~~e~~~ 181 (393)
T 1cg2_A 148 LFNTDEEKGSFGSRDLIQEEA--KLADYVLSFEPTS 181 (393)
T ss_dssp EEESCGGGTTTTTHHHHHHHH--HHCSEEEECCCEE
T ss_pred EEEcccccCCccHHHHHHHHh--hcCCEEEEeCCCC
Confidence 999999999999999986532 3567888888654
No 26
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=99.37 E-value=2.9e-12 Score=147.11 Aligned_cols=146 Identities=16% Similarity=0.227 Sum_probs=112.6
Q ss_pred HH-HHHHHHHHHHccCCCCCCC-HHHHHHHHHHHHHHHhcccccCCcceEEEEEEeccCCCcccccccccCccccccccc
Q 002959 86 EL-EAMKHVKALTQLGPHAVGS-DALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLN 163 (862)
Q Consensus 86 ~e-rA~~~L~~L~~igpr~~GS-~~n~~a~~yL~~~l~~lg~~~~~~~~ve~d~~~~~~g~~~~~g~~~~~~~~~Y~~~~ 163 (862)
.+ ++.+.+++|.++ |.+.+. ++..++++||.++|+++| ++++.+. . ....
T Consensus 42 ~~~~~~~~l~~l~~i-ps~s~~e~~~~~~~~~l~~~l~~~G------~~~~~~~--~-------------------~~~~ 93 (481)
T 2pok_A 42 VAQHYFEVLRTLISK-KSVFAQQVGLKEVANYLGEIFKRVG------AEVEIDE--S-------------------YTAP 93 (481)
T ss_dssp HHHHHHHHHHHHHHS-CCCGGGCTTHHHHHHHHHHHHHHTT------CEEEEEC--S-------------------SSSC
T ss_pred hhHHHHHHHHHHHcC-CCcCCCCHHHHHHHHHHHHHHHHcC------CEEEEec--C-------------------CCCc
Confidence 45 788999999997 333332 344789999999999998 2344321 0 1368
Q ss_pred eEEEEEcCCCCCCCCCCeEEEEeecCccCC---------------------CCCCCCChhHHHHHHHHHHHHHhccCCCC
Q 002959 164 HIVLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEFK 222 (862)
Q Consensus 164 NVi~~i~g~~~~~~~~~~Vll~AH~Dsv~~---------------------spGA~Dd~sgva~~LE~ar~L~~~~~~p~ 222 (862)
||+++++|. ..+.+.|++.+|+|+||. ++|+.||++|++++|++++.|++.+.+++
T Consensus 94 ~v~a~~~g~---~~~~~~i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~l~~~~~~~~ 170 (481)
T 2pok_A 94 FVMAHFKSS---RPDAKTLIFYNHYDTVPADGDQVWTEDPFTLSVRNGFMYGRGVDDDKGHITARLSALRKYMQHHDDLP 170 (481)
T ss_dssp EEEEEECCS---STTCCEEEEEEECCCCCSCSSCCCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTCSSCS
T ss_pred EEEEEecCC---CCCCCeEEEEEeccCcCCCCccccccCCCCceeeCCeEEccccccCcHHHHHHHHHHHHHHHhcCCCC
Confidence 999999873 134578999999999874 47899999999999999999998755788
Q ss_pred ccEEEEEeCCcCCCCcchHHHHhcCCc-cCCccEEEEeecC
Q 002959 223 NAVIFLFNTGEEEGLNGAHSFVTQHPW-STTIRVAVDLEAM 262 (862)
Q Consensus 223 ~~I~Flf~~aEE~gl~GS~~fv~~h~~-~~~v~a~iNLD~~ 262 (862)
++|+|+|+.+||.|..|++.+++++.. .+++.++++.|..
T Consensus 171 ~~v~~~~~~~EE~g~~g~~~~~~~~~~~~~~~d~~i~~~~~ 211 (481)
T 2pok_A 171 VNISFIMEGAEESASTDLDKYLEKHADKLRGADLLVWEQGT 211 (481)
T ss_dssp SEEEEEEESCGGGTTTTHHHHHHHHHHHHTTCSEEECSCCB
T ss_pred CCEEEEEecccccCchhHHHHHHHhHhhccCCCEEEECCCC
Confidence 999999999999999999999865421 1226677777753
No 27
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=99.35 E-value=3.5e-12 Score=144.64 Aligned_cols=140 Identities=12% Similarity=0.149 Sum_probs=108.5
Q ss_pred HHHHHHHHHHHccCCCCCC--------CHHHHHHHHHHHHHHHhcccccCCcceEEEEEEeccCCCcccccccccCcccc
Q 002959 87 LEAMKHVKALTQLGPHAVG--------SDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLI 158 (862)
Q Consensus 87 erA~~~L~~L~~igpr~~G--------S~~n~~a~~yL~~~l~~lg~~~~~~~~ve~d~~~~~~g~~~~~g~~~~~~~~~ 158 (862)
+++.+.|++|++|. .+.+ ++++.++++||.++++++|.+ ++++|
T Consensus 27 ~~~~~~l~~lv~i~-s~s~~~~~~~~~~~~e~~~~~~l~~~l~~~G~~-----~~~~d---------------------- 78 (434)
T 3ife_A 27 EELIERFTRYVKID-TQSNEDSHTVPTTPGQIEFGKLLVEELKEVGLT-----EVTMD---------------------- 78 (434)
T ss_dssp HHHHHHHHHHHTSC-CBCCTTCCSSSSSHHHHHHHHHHHHHHHHHTCE-----EEEEC----------------------
T ss_pred HHHHHHHHhhEEee-ccCCCccCCCCCCHHHHHHHHHHHHHHHHcCCc-----eEEEC----------------------
Confidence 67889999999984 3333 346679999999999999821 13332
Q ss_pred ccccceEEEEEcCCCCCCCCCCeEEEEeecCccCCC--------------------------------------------
Q 002959 159 YSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAG-------------------------------------------- 194 (862)
Q Consensus 159 Y~~~~NVi~~i~g~~~~~~~~~~Vll~AH~Dsv~~s-------------------------------------------- 194 (862)
...||+++++|+. ..+.+.|++.+|+|+||..
T Consensus 79 --~~~nv~a~~~g~~--~~~~~~v~l~~H~DtVp~~~~~~~~p~~~~~~dg~~i~l~~~~~~~~~~~~~~~~~~~~g~~~ 154 (434)
T 3ife_A 79 --DNGYVMATLPANT--DKDVPVIGFLAHLDTATDFTGKNVKPQIHENFDGNAITLNEELNIVLTPEQFPELPSYKGHTI 154 (434)
T ss_dssp --TTSCEEEEECCBS--SSCCCCEEEEEECCBCTTSCCSSCCCEEETTCCSSCEEEETTTTEEECTTTCTTGGGGTTSCE
T ss_pred --CCcEEEEEeCCCC--CCCCCeEEEEEEcccCCCCCCCCCccEEeecCCCCceecccccccccChhhChhHHhhcCCcE
Confidence 3578999998852 1245789999999999751
Q ss_pred ---CC----CCCChhHHHHHHHHHHHHHhccCCCCccEEEEEeCCcCCCCcchHHHHhcCCccCCccEEEEeecC
Q 002959 195 ---EG----AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAM 262 (862)
Q Consensus 195 ---pG----A~Dd~sgva~~LE~ar~L~~~~~~p~~~I~Flf~~aEE~gl~GS~~fv~~h~~~~~v~a~iNLD~~ 262 (862)
+| +.||+.|+|++|++++.|.+.+..++++|.|+|..+||.| .|++.+..+. .++.+++++|..
T Consensus 155 i~grG~t~~~~D~K~gva~~l~a~~~L~~~~~~~~~~i~~if~~~EE~g-~Ga~~~~~~~---~~~d~~~~~d~~ 225 (434)
T 3ife_A 155 ITTDGTTLLGADDKAGLTEIMVAMNYLIHNPQIKHGKIRVAFTPDEEIG-RGPAHFDVEA---FGASFAYMMDGG 225 (434)
T ss_dssp EECCSSSCCCHHHHHHHHHHHHHHHHHHTCTTSCBCCEEEEEESCGGGT-CTGGGCCHHH---HCCSEEEECCCC
T ss_pred EECCCccchhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEECCcccC-hHHHHhhhhh---cCCCEEEEecCC
Confidence 13 4899999999999999999987788999999999999999 8988764221 146788888843
No 28
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.34 E-value=9.3e-12 Score=137.59 Aligned_cols=135 Identities=22% Similarity=0.266 Sum_probs=107.5
Q ss_pred HHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEEEeccCCCcccccccccCccccccccceE
Q 002959 86 ELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHI 165 (862)
Q Consensus 86 ~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~lg~~~~~~~~ve~d~~~~~~g~~~~~g~~~~~~~~~Y~~~~NV 165 (862)
.+++.+.+++|.++ |.+.+. +.++++||.++|+++|. +++.+ ..|+
T Consensus 10 ~~~~~~~~~~l~~~-ps~s~~--e~~~~~~l~~~l~~~g~------~~~~~-------------------------~~nv 55 (356)
T 3ct9_A 10 TAEAVSLLKSLISI-PSISRE--ETQAADFLQNYIEAEGM------QTGRK-------------------------GNNV 55 (356)
T ss_dssp HHHHHHHHHHHHTS-CCBTTC--CHHHHHHHHHHHHHTTC------CEEEE-------------------------TTEE
T ss_pred HHHHHHHHHHHhcC-CCCCCC--hHHHHHHHHHHHHHCCC------eEEEE-------------------------eeeE
Confidence 35788899999996 444443 35788999999999983 33321 4689
Q ss_pred EEEEcCCCCCCCCCCeEEEEeecCccCC-------------------CCCCCCChhHHHHHHHHHHHHHhccCCCCccEE
Q 002959 166 VLRILPKYASEAGENAILVSSHIDTVSA-------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVI 226 (862)
Q Consensus 166 i~~i~g~~~~~~~~~~Vll~AH~Dsv~~-------------------spGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~ 226 (862)
+++++|+ ..+.+.|++.||+|+||. ++|+.|+++|++++|++++.|++.+ ++++|+
T Consensus 56 ~a~~~g~---~~~~~~i~l~aH~D~vp~~~~w~~~p~~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~--~~~~v~ 130 (356)
T 3ct9_A 56 WCLSPMF---DLKKPTILLNSHIDTVKPVNGWRKDPFTPREENGKLYGLGSNDAGASVVSLLQVFLQLCRTS--QNYNLI 130 (356)
T ss_dssp EEECSSC---CTTSCEEEEEEECCBCCCC-------CCCEECSSEEESTTTTTTHHHHHHHHHHHHHHTTSC--CSSEEE
T ss_pred EEEEecC---CCCCCeEEEEccccccCCCCCCCCCCCccEEECCEEEecCcccchHHHHHHHHHHHHHHhcC--CCCCEE
Confidence 9999873 134578999999999975 4788899999999999999999865 789999
Q ss_pred EEEeCCcCC-CCcchHHHHhcCCccCCccEEEEeecC
Q 002959 227 FLFNTGEEE-GLNGAHSFVTQHPWSTTIRVAVDLEAM 262 (862)
Q Consensus 227 Flf~~aEE~-gl~GS~~fv~~h~~~~~v~a~iNLD~~ 262 (862)
|+|+.+||. |+.|++.++++.. +..+++++|..
T Consensus 131 ~~~~~~EE~~g~~G~~~~~~~~~---~~d~~i~~ep~ 164 (356)
T 3ct9_A 131 YLASCEEEVSGKEGIESVLPGLP---PVSFAIVGEPT 164 (356)
T ss_dssp EEEECCGGGTCTTTHHHHGGGSC---CCSEEEECCSB
T ss_pred EEEEeCcccCCccCHHHHHhhCC---CCCEEEEcCCC
Confidence 999999999 8999999997653 45577887754
No 29
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=99.33 E-value=2e-11 Score=140.43 Aligned_cols=156 Identities=15% Similarity=0.170 Sum_probs=116.5
Q ss_pred HHHHHHHHHHHHccCCCC--CCCH----HHHHHHHHHHHHHHhcccccCCcceEEEEEEeccCCCcccccccccCccccc
Q 002959 86 ELEAMKHVKALTQLGPHA--VGSD----ALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIY 159 (862)
Q Consensus 86 ~erA~~~L~~L~~igpr~--~GS~----~n~~a~~yL~~~l~~lg~~~~~~~~ve~d~~~~~~g~~~~~g~~~~~~~~~Y 159 (862)
.++..+.+++|.++ |-+ .+.+ +..++.+||.++|+++|. +++.+.. +...... +. .+
T Consensus 24 ~~~~i~~l~~lv~i-ps~~~s~~~~~~~~~~~~~~~l~~~l~~~G~------~~~~~~~----~~~~~~~----g~--~~ 86 (485)
T 3dlj_A 24 QDEFVQTLKEWVAI-ESDSVQPVPRFRQELFRMMAVAADTLQRLGA------RVASVDM----GPQQLPD----GQ--SL 86 (485)
T ss_dssp HHHHHHHHHHHHTS-CCBSSSCCHHHHHHHHHHHHHHHHHHHHTTC------EEEEECC----CEEEC------CC--EE
T ss_pred HHHHHHHHHHHhcC-CCccCCCCccccHHHHHHHHHHHHHHHHcCC------eEEEEec----CcccccC----CC--cc
Confidence 57788999999997 444 4442 246899999999999983 3443210 0000000 00 00
Q ss_pred cccceEEEEEcCCCCCCCCCCeEEEEeecCccCC---------------------CCCCCCChhHHHHHHHHHHHHHhcc
Q 002959 160 SDLNHIVLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWA 218 (862)
Q Consensus 160 ~~~~NVi~~i~g~~~~~~~~~~Vll~AH~Dsv~~---------------------spGA~Dd~sgva~~LE~ar~L~~~~ 218 (862)
....||++++.+. .+.+.|+|.+|+|+||. ++|+.||++|++++|++++.|++.+
T Consensus 87 ~~~~~v~a~~~~~----~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~ 162 (485)
T 3dlj_A 87 PIPPVILAELGSD----PTKGTVCFYGHLDVQPADRGDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAFRALE 162 (485)
T ss_dssp ECCCEEEEEECCC----TTSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTT
T ss_pred CCCcEEEEEECCC----CCCCEEEEEeeecCCCCCCcccCCCCCCccEEECCEEEecccccCcHHHHHHHHHHHHHHHhC
Confidence 1146899999652 34578999999999985 3899999999999999999999988
Q ss_pred CCCCccEEEEEeCCcCCCCcchHHHHhcCCc--cCCccEEEEeecC
Q 002959 219 HEFKNAVIFLFNTGEEEGLNGAHSFVTQHPW--STTIRVAVDLEAM 262 (862)
Q Consensus 219 ~~p~~~I~Flf~~aEE~gl~GS~~fv~~h~~--~~~v~a~iNLD~~ 262 (862)
.+++.+|.|+|..+||.|..|++.+++++.. .+++.+++++|..
T Consensus 163 ~~~~~~v~~~~~~~EE~g~~g~~~~~~~~~~~~~~~~d~~~~~~~~ 208 (485)
T 3dlj_A 163 QDLPVNIKFIIEGMEEAGSVALEELVEKEKDRFFSGVDYIVISDNL 208 (485)
T ss_dssp CCCSSEEEEEEESCGGGTTTTHHHHHHHHTTTTSTTCCEEEECCCB
T ss_pred CCCCccEEEEEEcccccCCccHHHHHHhhhhhcccCCCEEEEcCCC
Confidence 7889999999999999999999999977653 3578899999854
No 30
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=99.32 E-value=1.1e-11 Score=140.08 Aligned_cols=159 Identities=15% Similarity=0.081 Sum_probs=113.5
Q ss_pred HHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEEEeccCCCcccccccccCccc-cccccce
Q 002959 86 ELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTL-IYSDLNH 164 (862)
Q Consensus 86 ~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~lg~~~~~~~~ve~d~~~~~~g~~~~~g~~~~~~~~-~Y~~~~N 164 (862)
.+++.+.+++|.++ |.+.+ .+.++++||.++|+++|. +++........ .....+ +..... ......|
T Consensus 25 ~~~~~~~l~~l~~~-ps~s~--~e~~~~~~l~~~l~~~G~------~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~ 92 (433)
T 3pfo_A 25 FNDQVAFLQRMVQF-RSVRG--EEAPQQEWLAQQFADRGY------KVDTFSLADVD-IASHPK--AAPMDTIDPAGSMQ 92 (433)
T ss_dssp HHHHHHHHHHHHTS-CCBTT--CCHHHHHHHHHHHHHTTC------EEEEEETGGGT-GGGSTT--CCCCTTCCGGGCEE
T ss_pred HHHHHHHHHHHhcC-CCCCC--CHHHHHHHHHHHHHHCCC------ceEEEecchhh-hhcccc--ccccccccCCCCcE
Confidence 36778889999986 44433 346799999999999983 33332110000 000000 000000 1235689
Q ss_pred EEEEEcCCCCCCCCCCeEEEEeecCccCCC---------------------CCCCCChhHHHHHHHHHHHHHhccCCCCc
Q 002959 165 IVLRILPKYASEAGENAILVSSHIDTVSAG---------------------EGAGDCSSCVAVMLELARVMSQWAHEFKN 223 (862)
Q Consensus 165 Vi~~i~g~~~~~~~~~~Vll~AH~Dsv~~s---------------------pGA~Dd~sgva~~LE~ar~L~~~~~~p~~ 223 (862)
|+++++|. .+.+.|++.+|+|+||.+ +|+.||++|+|++|++++.|.+.+.++++
T Consensus 93 via~~~g~----~~~~~v~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~~~a~~l~a~~~l~~~~~~~~~ 168 (433)
T 3pfo_A 93 VVATADSD----GKGRSLILQGHIDVVPEGPVDLWSDPPYEAKVRDGWMIGRGAQDMKGGVSAMIFALDAIRTAGYAPDA 168 (433)
T ss_dssp EEEEECCC----CCSCCEEEEEECCBCCCCCGGGCSSCTTTCCEETTEEECTTTTTTHHHHHHHHHHHHHHHHTTEEESS
T ss_pred EEEEEecC----CCCCEEEEEcccCCcCCCCcccCCCCCCCcEEECCEEEecchhhhhHHHHHHHHHHHHHHHcCCCCCc
Confidence 99999873 345789999999999853 59999999999999999999987777889
Q ss_pred cEEEEEeCCcCCCCcchHHHHhcCCccCCccEEEEeecCc
Q 002959 224 AVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMG 263 (862)
Q Consensus 224 ~I~Flf~~aEE~gl~GS~~fv~~h~~~~~v~a~iNLD~~G 263 (862)
+|.|+|..+||.|..|++.++++. .+..++|+.|..+
T Consensus 169 ~v~~~~~~~EE~g~~G~~~~~~~~---~~~d~~i~~ep~~ 205 (433)
T 3pfo_A 169 RVHVQTVTEEESTGNGALSTLMRG---YRADACLIPEPTG 205 (433)
T ss_dssp CEEEEEESCTTTTCHHHHHHHHTT---CCCSEEEECCCCS
T ss_pred cEEEEEEecCccCChhHHHHHhcC---CCCCEEEEeCCCC
Confidence 999999999999989999998543 2567888888544
No 31
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=99.29 E-value=1.5e-11 Score=141.30 Aligned_cols=128 Identities=16% Similarity=0.160 Sum_probs=105.5
Q ss_pred CCCHHHHHHHHHHH-HccCCC--------------CCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEEEeccCCCccc
Q 002959 83 GFSELEAMKHVKAL-TQLGPH--------------AVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRV 147 (862)
Q Consensus 83 ~fs~erA~~~L~~L-~~igpr--------------~~GS~~n~~a~~yL~~~l~~lg~~~~~~~~ve~d~~~~~~g~~~~ 147 (862)
+.+.+++++.|++| ++|+.. +..+.++.++++||.++|+++| ++++.+
T Consensus 28 ~~~~~~~~~~l~~L~v~i~s~s~~~~~~~~~g~~r~~~s~~e~~~~~~l~~~l~~~G------~~v~~d----------- 90 (474)
T 2v8h_A 28 SIASGRLNQTILETGSQFGGVARWGQESHEFGMRRLAGTALDGAMRDWFTNECESLG------CKVKVD----------- 90 (474)
T ss_dssp CCCTTHHHHHHHHHHHHTTEECCCSSSTTCCEECCCTTSHHHHHHHHHHHHHHHHTT------CEEEEB-----------
T ss_pred cCCHHHHHHHHHHHhhhcCCccccccccccCCcccCCCCHHHHHHHHHHHHHHHHcC------CEEEEe-----------
Confidence 46778999999999 998422 2336777899999999999998 234331
Q ss_pred ccccccCccccccccceEEEEEcCCCCCCCCCCeEEEEeecCccCCCCCCCCChhHHHHHHHHHHHHHhccCCCCccEEE
Q 002959 148 GTGVFKGKTLIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIF 227 (862)
Q Consensus 148 ~g~~~~~~~~~Y~~~~NVi~~i~g~~~~~~~~~~Vll~AH~Dsv~~spGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~F 227 (862)
...||+++++|+ .+.+.|++.+|+|+||.. |..|++.|++++|++++.|.+.+.+++++|.|
T Consensus 91 -------------~~gnvia~~~g~----~~~~~i~l~~H~DtVp~~-g~~D~k~gvaa~L~a~~~L~~~~~~~~~~v~l 152 (474)
T 2v8h_A 91 -------------KIGNMFAVYPGK----NGGKPTATGSHLDTQPEA-GKYDGILGVLAGLEVLRTFKDNNYVPNYDVCV 152 (474)
T ss_dssp -------------TTCCEEEEECCS----SCCSCEEEEECCCCCSSB-CSSTTHHHHHHHHHHHHHHHHHTCCCSSCEEE
T ss_pred -------------cCceEEEEECCC----CCCCeEEEEEecccCCCC-CCcCCHHHHHHHHHHHHHHHHcCCCCCCCEEE
Confidence 235899999874 233489999999999963 77899999999999999999988888999999
Q ss_pred EEeCCcCC-----CCcchHHHHh
Q 002959 228 LFNTGEEE-----GLNGAHSFVT 245 (862)
Q Consensus 228 lf~~aEE~-----gl~GS~~fv~ 245 (862)
+|+.+||. |+.||+.++.
T Consensus 153 if~~dEE~~~~~~g~~Gs~~l~~ 175 (474)
T 2v8h_A 153 VVWFNAEGARFARSCTGSSVWSH 175 (474)
T ss_dssp EECTTCSCSSSSCTTHHHHHHTT
T ss_pred EEECCccCCCCCCCcccHHHHHh
Confidence 99999998 7789999974
No 32
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=99.28 E-value=1.5e-11 Score=136.28 Aligned_cols=149 Identities=20% Similarity=0.276 Sum_probs=111.9
Q ss_pred CCCHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEEEeccCCCcccccccccCcccccccc
Q 002959 83 GFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDL 162 (862)
Q Consensus 83 ~fs~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~lg~~~~~~~~ve~d~~~~~~g~~~~~g~~~~~~~~~Y~~~ 162 (862)
.++.+++.+.+++|.++ |.+ |..+.++++||.++|+++| ++++.+.... ......
T Consensus 2 ~~~~~~~~~~l~~l~~~-ps~--s~~e~~~~~~l~~~l~~~G------~~v~~~~~~~----------------~~~~~~ 56 (373)
T 3gb0_A 2 MINQERLVNEFMELVQV-DSE--TKFEAEICKVLTKKFTDLG------VEVFEDDTMA----------------VTGHGA 56 (373)
T ss_dssp CSCHHHHHHHHHHHHTS-CCB--TTCCHHHHHHHHHHHHHTT------CEEEECSCHH----------------HHCCSS
T ss_pred CCCHHHHHHHHHHHhcc-cCC--CccHHHHHHHHHHHHHHCC------CEEEEecccc----------------ccCCCc
Confidence 36789999999999997 333 3345789999999999998 3344321000 001145
Q ss_pred ceEEEEEcCCCCCCCCCCeEEEEeecCccCC--------------CCCC----CCChhHHHHHHHHHHHHHhccCCCCcc
Q 002959 163 NHIVLRILPKYASEAGENAILVSSHIDTVSA--------------GEGA----GDCSSCVAVMLELARVMSQWAHEFKNA 224 (862)
Q Consensus 163 ~NVi~~i~g~~~~~~~~~~Vll~AH~Dsv~~--------------spGA----~Dd~sgva~~LE~ar~L~~~~~~p~~~ 224 (862)
.||+++++|+ ..+.+.|++.||+|+||. ++|+ .||+.|++++|++++.|.+.+. ++++
T Consensus 57 ~nv~a~~~g~---~~~~~~v~l~aH~D~vp~~~~~~p~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~-~~~~ 132 (373)
T 3gb0_A 57 GNLICTLPAT---KDGVDTIYFTSHMDTVVPGNGIKPSIKDGYIVSDGTTILGADDKAGLASMFEAIRVLKEKNI-PHGT 132 (373)
T ss_dssp CCEEEEECCS---STTCCCEEEEEECCBCSSCSSCCCEEETTEEECCSSSCCCHHHHHHHHHHHHHHHHHHHTTC-CCCC
T ss_pred eeEEEEecCC---CCCCCEEEEEEECcccCCCCCcCcEEECCEEECCCccccCcccHHHHHHHHHHHHHHHhcCC-CCCC
Confidence 8999999874 134578999999999974 3576 5999999999999999998754 6799
Q ss_pred EEEEEeCCcCCCCcchHHHHhcCCccCCccEEEEeecCc
Q 002959 225 VIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMG 263 (862)
Q Consensus 225 I~Flf~~aEE~gl~GS~~fv~~h~~~~~v~a~iNLD~~G 263 (862)
|.|+|..+||.|..|++.+..+. .+....+++|..+
T Consensus 133 v~~~~~~~EE~g~~Ga~~~~~~~---~~~~~~~~~~~~~ 168 (373)
T 3gb0_A 133 IEFIITVGEESGLVGAKALDRER---ITAKYGYALDSDG 168 (373)
T ss_dssp EEEEEESCGGGTSHHHHHSCGGG---CCCSEEEEEEECS
T ss_pred EEEEEEeccccCchhhhhhCHHh---cCCCEEEEEcCCC
Confidence 99999999999999999886322 2446667777544
No 33
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=99.27 E-value=2.3e-11 Score=134.49 Aligned_cols=139 Identities=22% Similarity=0.221 Sum_probs=108.8
Q ss_pred HHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEEEeccCCCcccccccccCccccccccceEE
Q 002959 87 LEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIV 166 (862)
Q Consensus 87 erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~lg~~~~~~~~ve~d~~~~~~g~~~~~g~~~~~~~~~Y~~~~NVi 166 (862)
+++.+.+++|.++ |.+.+ .+.++.+||.++|+++|.+ .++++. ...|++
T Consensus 13 ~~~~~~~~~l~~~-ps~s~--~e~~~~~~l~~~l~~~G~~-----~~~~~~-----------------------~~~~~~ 61 (369)
T 3tx8_A 13 GDPIVLTQRLVDI-PSPSG--QEKQIADEIEDALRNLNLP-----GVEVFR-----------------------FNNNVL 61 (369)
T ss_dssp SCHHHHHHHHHSS-CCBTT--CTHHHHHHHHHHHHTTTCT-----TCEEEE-----------------------ETTEEE
T ss_pred HHHHHHHHHHhcC-CCCCc--cHHHHHHHHHHHHHhcCCC-----CcEEec-----------------------cCCcEE
Confidence 4568899999996 44433 3467899999999999731 123321 235899
Q ss_pred EEEcCCCCCCCCCCeEEEEeecCccCC--------------CCCCCCChhHHHHHHHHHHHHHhccCCCCccEEEEEeCC
Q 002959 167 LRILPKYASEAGENAILVSSHIDTVSA--------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTG 232 (862)
Q Consensus 167 ~~i~g~~~~~~~~~~Vll~AH~Dsv~~--------------spGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~Flf~~a 232 (862)
++++++ +.+.|++.+|+|+||. ++|+.||++|++++|++++.|++. .+++++|+|+|..+
T Consensus 62 a~~~~~-----~~~~v~l~~H~D~vp~~~~~~~~~~~g~~~g~G~~D~K~~~a~~l~a~~~l~~~-~~~~~~v~~~~~~~ 135 (369)
T 3tx8_A 62 ARTNRG-----LASRVMLAGHIDTVPIADNLPSRVEDGIMYGCGTVDMKSGLAVYLHTFATLATS-TELKHDLTLIAYEC 135 (369)
T ss_dssp EECCCC-----CSCEEEEEEECCBSCCCSCCSCEECSSEEESSSTTTTHHHHHHHHHHHHHHTSC-TTCCSEEEEEEECC
T ss_pred EEecCC-----CCCeEEEEcccCccCCCCCCCCeEECCEEEcCCcccchHHHHHHHHHHHHHHhh-cCCCccEEEEEEec
Confidence 998763 3478999999999986 389999999999999999999863 46789999999999
Q ss_pred cCCCC--cchHHHHhcCCccCCccEEEEeecC
Q 002959 233 EEEGL--NGAHSFVTQHPWSTTIRVAVDLEAM 262 (862)
Q Consensus 233 EE~gl--~GS~~fv~~h~~~~~v~a~iNLD~~ 262 (862)
||.|. .|++.++++++...+..++|+.|..
T Consensus 136 EE~g~~~~G~~~~~~~~~~~~~~~~~i~~ep~ 167 (369)
T 3tx8_A 136 EEVADHLNGLGHIRDEHPEWLAADLALLGEPT 167 (369)
T ss_dssp CSSCTTSCHHHHHHHHCGGGGCCSEEEECCCC
T ss_pred cccCcccccHHHHHHhcccccCCCEEEEeCCC
Confidence 99997 7999999877433456778887754
No 34
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=99.27 E-value=2.1e-11 Score=137.37 Aligned_cols=126 Identities=16% Similarity=0.077 Sum_probs=102.3
Q ss_pred HHHHHHHHHHHHccCCCC-------CCCHHHHHHHHHHHHHHHhcccccCCcceEEEEEEeccCCCcccccccccCcccc
Q 002959 86 ELEAMKHVKALTQLGPHA-------VGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLI 158 (862)
Q Consensus 86 ~erA~~~L~~L~~igpr~-------~GS~~n~~a~~yL~~~l~~lg~~~~~~~~ve~d~~~~~~g~~~~~g~~~~~~~~~ 158 (862)
.+++++.|++|++|+... ..+.++.++.+||.++++++|. +++.|
T Consensus 8 ~~~~~~~l~~lv~i~s~s~~g~~~~~~s~~e~~~~~~i~~~l~~~G~------~v~~~---------------------- 59 (423)
T 1z2l_A 8 RQAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGL------ETRFD---------------------- 59 (423)
T ss_dssp HHHHHHHHHHHHHTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHTTC------EEEEC----------------------
T ss_pred HHHHHHHHHHHHhcCCCCCCCcccCcCCHHHHHHHHHHHHHHHHcCC------EEEEe----------------------
Confidence 578899999999985322 1235667899999999999982 33331
Q ss_pred ccccceEEEEEcCCCCCCCCCCeEEEEeecCccCCCCCCCCChhHHHHHHHHHHHHHhccCCCCccEEEEEeCCcCC---
Q 002959 159 YSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEE--- 235 (862)
Q Consensus 159 Y~~~~NVi~~i~g~~~~~~~~~~Vll~AH~Dsv~~spGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~Flf~~aEE~--- 235 (862)
...|++++++|+ .+..+.|++.+|+|+||. .|..|++.|++++|++++.|++.+.+++++|+|+|+.+||.
T Consensus 60 --~~gnv~a~~~g~---~~~~~~i~l~~H~D~Vp~-~g~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~i~~~~EE~~~~ 133 (423)
T 1z2l_A 60 --EVGNLYGRLNGT---EYPQEVVLSGSHIDTVVN-GGNLDGQFGALAAWLAIDWLKTQYGAPLRTVEVVAMAEEEGSRF 133 (423)
T ss_dssp --TTSCEEEEECCS---SEEEEEEEEEEECCCCTT-BCSSTTHHHHHHHHHHHHHHHHHHCSCSEEEEEEEESCSSCCSS
T ss_pred --cCCcEEEEEcCC---CCCCCEEEEEEecCCCCC-CCccCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCcccccc
Confidence 234999999874 122378999999999995 48899999999999999999998778999999999999998
Q ss_pred --CCcchHHHHh
Q 002959 236 --GLNGAHSFVT 245 (862)
Q Consensus 236 --gl~GS~~fv~ 245 (862)
|+.||+.+..
T Consensus 134 ~~g~~Gs~~~~~ 145 (423)
T 1z2l_A 134 PYVFWGSKNIFG 145 (423)
T ss_dssp SCSCHHHHHHTT
T ss_pred CCCcccHHHHHc
Confidence 5679999885
No 35
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=99.24 E-value=2.3e-11 Score=134.83 Aligned_cols=139 Identities=22% Similarity=0.243 Sum_probs=105.8
Q ss_pred CHHHHHHHHHHHHccCCCCCCCH-HHHHHHHHHHHHHHhcccccCCcceEEEEEEeccCCCcccccccccCccccccccc
Q 002959 85 SELEAMKHVKALTQLGPHAVGSD-ALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLN 163 (862)
Q Consensus 85 s~erA~~~L~~L~~igpr~~GS~-~n~~a~~yL~~~l~~lg~~~~~~~~ve~d~~~~~~g~~~~~g~~~~~~~~~Y~~~~ 163 (862)
+.+++.+.+++|.++ |.+...+ ++.++.+||.++|+++|. +++.+ ..
T Consensus 4 ~~~~~~~~l~~l~~i-ps~s~~~~~e~~~~~~l~~~l~~~G~------~~~~~-------------------------~~ 51 (364)
T 2rb7_A 4 SMQHIVELTSDLIRF-PSMHSRPEQISRCAGFIMDWCAQNGI------HAERM-------------------------DH 51 (364)
T ss_dssp HHHHHHHHHHHHHTS-CCCTTCHHHHHHHHHHHHHHHHHTTC------CCEEE-------------------------EE
T ss_pred cHHHHHHHHHHHHcC-CCCCCCcchHHHHHHHHHHHHHHcCC------eEEEe-------------------------cC
Confidence 356788999999997 4433333 445899999999999983 33321 13
Q ss_pred eEEEEEcCCCCCCCCCCeEEEEeecCccCC---------------CCCCCCChhHHHHHHHHHHHHHhccCCC---Ccc-
Q 002959 164 HIVLRILPKYASEAGENAILVSSHIDTVSA---------------GEGAGDCSSCVAVMLELARVMSQWAHEF---KNA- 224 (862)
Q Consensus 164 NVi~~i~g~~~~~~~~~~Vll~AH~Dsv~~---------------spGA~Dd~sgva~~LE~ar~L~~~~~~p---~~~- 224 (862)
|++++++|+. ..+.+.|++.+|+|+||. ++|+.|+++|++++|++++.|.+.+.++ +++
T Consensus 52 ~~~~~~~~~~--~~~~~~i~l~aH~D~vp~~~~p~~~~~~~g~~~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~~g~~ 129 (364)
T 2rb7_A 52 DGIPSVMVLP--EKGRAGLLLMAHIDVVDAEDDLFVPRVENDRLYGRGANDDKYAVALGLVMFRDRLNALKAAGRSQKDM 129 (364)
T ss_dssp TTEEEEEECS--BTTEEEEEEEEECCCCCCCGGGGSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHHHHTTCCGGGC
T ss_pred CCceEEEEEc--CCCCCeEEEECccCcCCCCCCCCccEEECCEEEecccccccHHHHHHHHHHHHHHHhCCCCcccCCCc
Confidence 5667776521 124578999999999975 4789999999999999999999876555 457
Q ss_pred -EEEEEeCCcCC-CCcchHHHHhcCCccCCccEEEEeec
Q 002959 225 -VIFLFNTGEEE-GLNGAHSFVTQHPWSTTIRVAVDLEA 261 (862)
Q Consensus 225 -I~Flf~~aEE~-gl~GS~~fv~~h~~~~~v~a~iNLD~ 261 (862)
|.|+|+.+||. |+.|++.++++. +..+.+++|.
T Consensus 130 ~v~~~~~~~EE~~g~~G~~~~~~~~----~~d~~i~~d~ 164 (364)
T 2rb7_A 130 ALGLLITGDEEIGGMNGAAKALPLI----RADYVVALDG 164 (364)
T ss_dssp CEEEEEESCGGGTSTTTHHHHGGGC----EEEEEEECSS
T ss_pred cEEEEEEeccccCchhhHHHHHhcC----CCCEEEEccC
Confidence 99999999997 679999999654 4567788664
No 36
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.24 E-value=1.8e-10 Score=126.67 Aligned_cols=226 Identities=14% Similarity=0.190 Sum_probs=148.8
Q ss_pred HHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEEEeccCCCcccccccccCccccccccceEEE
Q 002959 88 EAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVL 167 (862)
Q Consensus 88 rA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~lg~~~~~~~~ve~d~~~~~~g~~~~~g~~~~~~~~~Y~~~~NVi~ 167 (862)
+..+.|++|+++ |.+.|.+ +.+++||.+++++++. ++++| +..|+++
T Consensus 6 ~~~~~l~~Lv~~-~s~sg~e--~~~~~~l~~~l~~~g~------~~~~d------------------------~~gnlia 52 (346)
T 1vho_A 6 ETGKLLMELSNL-DGPSGYE--TNVVSYIKSVIEPFVD------EAKTT------------------------RHGSLIG 52 (346)
T ss_dssp CHHHHHHHHHHS-CCBTTCC--HHHHHHHHHHHGGGCS------EEEEC------------------------TTSCEEE
T ss_pred HHHHHHHHHHcC-CCCCcch--HHHHHHHHHHHHhhCC------EEEEe------------------------cCCcEEE
Confidence 346789999997 5555543 4689999999999983 34332 3469999
Q ss_pred EEcCCCCCCCCCCeEEEEeecCccCC---------------------------------C--------------------
Q 002959 168 RILPKYASEAGENAILVSSHIDTVSA---------------------------------G-------------------- 194 (862)
Q Consensus 168 ~i~g~~~~~~~~~~Vll~AH~Dsv~~---------------------------------s-------------------- 194 (862)
+++|+ ..+.|+++||+|+|+. .
T Consensus 53 ~~~g~-----~~~~i~l~aH~DtV~~~v~~i~~G~l~~~~~Gg~~~~~~~g~~~~~~~~~g~~~G~i~~~~~h~~~~~~~ 127 (346)
T 1vho_A 53 YKKGK-----GIGKLAFFAHVDEIGFVVSKVEGQFARLEPVGGVDPKVVYASKVRIYTKNGIERGVIGMLAPHLQDSESR 127 (346)
T ss_dssp EECCS-----SSCEEEEEEECCBCCEEEEEEETTEEEEEEC--------CCCEEEEEETTEEEEEETTCCCSCCCCHHHH
T ss_pred EEcCC-----CCceEEEEecCcccceEeEEecCCeEEEEEeCCccCcccccCEEEEEcCCCcEEEEEcCCCcccCchhhc
Confidence 98773 2367999999999941 0
Q ss_pred ---------------------CC-------------------CCCChhHHHHHHHHHHHHHhccCCCCccEEEEEeCCcC
Q 002959 195 ---------------------EG-------------------AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEE 234 (862)
Q Consensus 195 ---------------------pG-------------------A~Dd~sgva~~LE~ar~L~~~~~~p~~~I~Flf~~aEE 234 (862)
.| +.||+.|+++++++++.+.+.+ ++.++.++|+.+||
T Consensus 128 ~~~~~~~~l~id~g~~~eei~~G~~~~~~~~~~~~g~~i~g~~~D~r~g~aa~l~al~~l~~~~--~~~~~~~~~t~~EE 205 (346)
T 1vho_A 128 KKVPTYDEIFVDLSLCERGVRVGDIAVIDQTAFETNGKVVGKALDNRASCGVLVKVLEFLKRYD--HPWDVYVVFSVQEE 205 (346)
T ss_dssp HTSCCTTCCEEEGGGSSSCCCTTCEEEECCCCEEETTEEEETTHHHHHHHHHHHHHHHHHTTCC--CSSEEEEEEECTTS
T ss_pred ccCCChhHeEEEeccchhcCCCCCEEEEccchhhhcCeEEeccCccHHHHHHHHHHHHHhhhcC--CCceEEEEEECCcc
Confidence 11 4799999999999999997643 56899999999999
Q ss_pred CCCcchHHHHhcCCccCCccEEEEeecCcCCCC----------eeEEE--eCCCHHHHHHHHHHccCCCCcccccccccC
Q 002959 235 EGLNGAHSFVTQHPWSTTIRVAVDLEAMGIGGR----------SALFQ--AGPNLWAVENFAAVAKYPSGQIIGQDLFAS 302 (862)
Q Consensus 235 ~gl~GS~~fv~~h~~~~~v~a~iNLD~~G~gG~----------~~lfq--~g~~~~li~~~~~~a~~p~~~~l~~eif~~ 302 (862)
.|+.|++.... .. .....|.+|....+.. ..... ...++.+++...++++. .+.........
T Consensus 206 vG~~Ga~~~~~--~i--~~~~~i~~D~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~l~~~~~~~a~~-~gi~~~~~~~~- 279 (346)
T 1vho_A 206 TGCLGALTGAY--EI--NPDAAIVMDVTFASEPPFSDHIELGKGPVIGLGPVVDRNLVQKIIEIAKK-HNVSLQEEAVG- 279 (346)
T ss_dssp SSHHHHHHTTC--CC--CCSEEEEEEEECCCCTTSCCCCCTTSCCEEECSTTSCHHHHHHHHHHHHH-TTCCCEEESSC-
T ss_pred cchhhHHHHhc--cc--CCCEEEEeecccccCCCCCcccccCCCceEEeCCcCCHHHHHHHHHHHHH-CCCCEEEEeCC-
Confidence 99999986542 11 2346677777665421 00111 11367777766665432 12111111111
Q ss_pred CCCCCCCchHHHhh-hcCCeEEEEeecCCCCCCCCcCCccCCCChhHHHHHHHHHHHHHHHHhcC
Q 002959 303 GVFETATDFQVYTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASS 366 (862)
Q Consensus 303 g~ips~TD~~~F~~-~~GIPgld~a~~~~~~~YHT~~Dt~d~Id~~sLq~~g~~~l~ll~~La~~ 366 (862)
| +++||...+.. ..|+|.+++.-.. . ..|++ -|.++.+.+....+.+.+++..++..
T Consensus 280 g--~ggsDa~~~~~~~~gipt~~lg~~~-~-~~Hs~---~E~~~~~dl~~~~~ll~~~~~~~~~~ 337 (346)
T 1vho_A 280 G--RSGTETDFVQLVRNGVRTSLISIPL-K-YMHTP---VEMVDPRDVEELARLLSLVAVELEVE 337 (346)
T ss_dssp C--C----CTTHHHHHTTCEEEEEEEEC-B-STTST---TEEECHHHHHHHHHHHHHHHHHCC--
T ss_pred C--CCCchHHHHHHhCCCCcEEEEehhh-c-ccccH---HHhcCHHHHHHHHHHHHHHHHHhhhh
Confidence 0 15789888852 3799999865443 3 38987 45677888999989999988877654
No 37
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=99.24 E-value=1.5e-10 Score=128.44 Aligned_cols=226 Identities=20% Similarity=0.180 Sum_probs=158.4
Q ss_pred HHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEEEeccCCCcccccccccCccccccccceE
Q 002959 86 ELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHI 165 (862)
Q Consensus 86 ~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~lg~~~~~~~~ve~d~~~~~~g~~~~~g~~~~~~~~~Y~~~~NV 165 (862)
..+.++.|++|+++ |.+.|.+ +++++|+.+++++++. +++.| +..|+
T Consensus 2 m~~~~~~l~~L~~i-ps~SG~E--~~v~~~l~~~l~~~g~------~~~~D------------------------~~GNl 48 (355)
T 3kl9_A 2 MTTLFSKIKEVTEL-AAVSGHE--APVRAYLREKLTPHVD------EVVTD------------------------GLGGI 48 (355)
T ss_dssp HHHHHHHHHHHHTS-CCBTTCC--HHHHHHHHHHHGGGSS------EEEEC------------------------TTSCE
T ss_pred hHHHHHHHHHHHhC-CCCCCCH--HHHHHHHHHHHHHhCC------EEEEC------------------------CCCeE
Confidence 34678899999996 6776654 5789999999999972 34432 45699
Q ss_pred EEEEcCCCCCCCCCCeEEEEeecCccCC--------C-------------------------------------------
Q 002959 166 VLRILPKYASEAGENAILVSSHIDTVSA--------G------------------------------------------- 194 (862)
Q Consensus 166 i~~i~g~~~~~~~~~~Vll~AH~Dsv~~--------s------------------------------------------- 194 (862)
+++++|+. ++.+.|+|.||+|+|+. +
T Consensus 49 i~~~~g~~---~~~~~v~l~aHmD~Vg~mV~~I~~~G~l~~~~iGG~~~~~~~~~~v~i~t~~g~~~~Gvig~~~~H~~~ 125 (355)
T 3kl9_A 49 FGIKHSEA---VDAPRVLVASHMDEVGFMVSEIKPDGTFRVVEIGGWNPMVVSSQRFKLLTRDGHEIPVISGSVPPHLTR 125 (355)
T ss_dssp EEEECCCS---TTCCEEEEEEECCBCEEEEEEECTTSCEEEEEESCCCTTTCSSCEEEEECTTSCEEEEEEC--------
T ss_pred EEEECCcC---CCCCeEEEEeccccccceEEEECCCCEEEEEecCCccccccCCCEEEEEcCCCCEEEEEEeCccccccC
Confidence 99998741 24578999999999862 0
Q ss_pred ----------------------------------------------------CCCCCChhHHHHHHHHHHHHHhccCCCC
Q 002959 195 ----------------------------------------------------EGAGDCSSCVAVMLELARVMSQWAHEFK 222 (862)
Q Consensus 195 ----------------------------------------------------pGA~Dd~sgva~~LE~ar~L~~~~~~p~ 222 (862)
..+-||.+||++++|+++.+++. .++
T Consensus 126 ~~~~~~~~~~~~~~iD~g~~s~ee~~~~GI~~Gd~v~~d~~~~~~~~~~~i~s~~lDnr~g~~~~l~~l~~l~~~--~~~ 203 (355)
T 3kl9_A 126 GKGGPTMPAIADIVFDGGFADKAEAESFGIRPGDTIVPDSSAILTANEKNIISKAWDNRYGVLMVSELAEALSGQ--KLG 203 (355)
T ss_dssp -------CCGGGSCEECCCSSHHHHHHTTCCTTCEEEECCCCEECTTSSEEEESCHHHHHHHHHHHHHHHHHSSC--CCS
T ss_pred hhhccCCCChhhEEEEeccCCHHHHHHcCCCCCCEEEeccceEEecCCCEEEeeccccHHHHHHHHHHHHHhhhc--CCC
Confidence 24789999999999999998753 578
Q ss_pred ccEEEEEeCCcCCCCcchHHHHhcCCccCCccEEEEeecCcCC-----------CCeeEEEeC---CCHHHHHHHHHHcc
Q 002959 223 NAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIG-----------GRSALFQAG---PNLWAVENFAAVAK 288 (862)
Q Consensus 223 ~~I~Flf~~aEE~gl~GS~~fv~~h~~~~~v~a~iNLD~~G~g-----------G~~~lfq~g---~~~~li~~~~~~a~ 288 (862)
++++++|+..||.|+.||+....... -..+|.+|+.-++ |..+-...+ .++.+.+...+.++
T Consensus 204 ~~v~~~ft~qEEvG~~Ga~~a~~~~~----pd~~i~~D~~~a~d~p~~~~~lg~G~~i~~~d~~~~~~~~l~~~l~~~a~ 279 (355)
T 3kl9_A 204 NELYLGSNVQEEVGLRGAHTSTTKFD----PEVFLAVDCSPAGDVYGGQGKIGDGTLIRFYDPGHLLLPGMKDFLLTTAE 279 (355)
T ss_dssp SEEEEEEESCCTTTSHHHHHHHHHHC----CSEEEEEEEEECCGGGTSSCCTTSCEEEEEEETTEECCHHHHHHHHHHHH
T ss_pred ceEEEEEECccccCcchhHHHHhccC----CCEEEEecCccCCCCCCcccccCCCcEEEEecCCCCCCHHHHHHHHHHHH
Confidence 99999999999999999987764321 2347888875432 222222222 27788887776653
Q ss_pred CCCCcccccccccCCCCCCCCchHHHhh-hcCCeEEEEeecCCCCCCCCcCCccCCCChhHHHHHHHHHHHHHHHHh
Q 002959 289 YPSGQIIGQDLFASGVFETATDFQVYTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTA 364 (862)
Q Consensus 289 ~p~~~~l~~eif~~g~ips~TD~~~F~~-~~GIPgld~a~~~~~~~YHT~~Dt~d~Id~~sLq~~g~~~l~ll~~La 364 (862)
. .+-. .+..+. ..+||-..+.. ..|+|.+++... .. ..||+. |.++.+.+.+..+.+.++++.+.
T Consensus 280 ~-~gIp-~q~~~~----ggGtDa~~i~~a~~Gipt~~igvp-~~-~~Hs~~---E~~~~~Di~~~~~ll~~~l~~l~ 345 (355)
T 3kl9_A 280 E-AGIK-YQYYCG----KGGTDAGAAHLKNGGVPSTTIGVC-AR-YIHSHQ---TLYAMDDFLEAQAFLQALVKKLD 345 (355)
T ss_dssp H-TTCC-EEEEEC----SSCCTHHHHTTSTTCCCEEEEEEE-EB-SCSSSC---EEEEHHHHHHHHHHHHHHHHTCC
T ss_pred H-cCCC-EEEECC----CcchHHHHHHHhCCCCCEEEEccC-cC-CCCCcc---eEeeHHHHHHHHHHHHHHHHHhC
Confidence 2 1111 111221 25899988763 368999987543 22 378875 56778888888888888876654
No 38
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=99.23 E-value=1.4e-10 Score=132.32 Aligned_cols=127 Identities=17% Similarity=0.191 Sum_probs=101.1
Q ss_pred CHHHHHHHHHHHHccCCCCCCCH----------HHHHHHHHHHHHHHhcccccCCcceEEEEEEeccCCCcccccccccC
Q 002959 85 SELEAMKHVKALTQLGPHAVGSD----------ALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKG 154 (862)
Q Consensus 85 s~erA~~~L~~L~~igpr~~GS~----------~n~~a~~yL~~~l~~lg~~~~~~~~ve~d~~~~~~g~~~~~g~~~~~ 154 (862)
..+++.+.+++|.++ |...+.+ +..++.+||.++++++|. +++..
T Consensus 12 ~~~~~~~~l~~l~~i-ps~s~~~~~~~~~p~~~~~~~~~~~l~~~l~~~G~------~~~~~------------------ 66 (470)
T 1lfw_A 12 KKDAILKDLEELIAI-DSSEDLENATEEYPVGKGPVDAMTKFLSFAKRDGF------DTENF------------------ 66 (470)
T ss_dssp THHHHHHHHHHHHTS-CCBCCGGGCCSSSTTCHHHHHHHHHHHHHHHHTTC------EEEEE------------------
T ss_pred hHHHHHHHHHHHcCC-CCcCCCccccccCCCcHHHHHHHHHHHHHHHHcCC------eEEEe------------------
Confidence 357889999999997 4544433 446899999999999982 33320
Q ss_pred ccccccccceEEEEEcCCCCCCCCCCeEEEEeecCccCC--------------------CCCCCCChhHHHHHHHHHHHH
Q 002959 155 KTLIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSA--------------------GEGAGDCSSCVAVMLELARVM 214 (862)
Q Consensus 155 ~~~~Y~~~~NVi~~i~g~~~~~~~~~~Vll~AH~Dsv~~--------------------spGA~Dd~sgva~~LE~ar~L 214 (862)
...++++++ |+ ..+.|++.+|+|+||. ++|+.||+.|++++|++++.|
T Consensus 67 ------~~~~~~~~~-g~-----~~~~i~l~~H~D~vp~~~~w~~~Pf~~~~~~~g~l~grG~~D~K~~~a~~l~a~~~l 134 (470)
T 1lfw_A 67 ------ANYAGRVNF-GA-----GDKRLGIIGHMDVVPAGEGWTRDPFKMEIDEEGRIYGRGSADDKGPSLTAYYGMLLL 134 (470)
T ss_dssp ------TTTEEEEEE-CC-----CSSEEEEEEECCBCCCCSCCSSCTTSCEECTTCEEESTTSSSSHHHHHHHHHHHHHH
T ss_pred ------cCeEEEEEe-CC-----CCCeEEEEEeecccCCCCCccCCCcceeEeeCCEEECCCcccChHHHHHHHHHHHHH
Confidence 123566666 52 2478999999999873 367899999999999999999
Q ss_pred HhccCCCCccEEEEEeCCcCCCCcchHHHHhcCC
Q 002959 215 SQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHP 248 (862)
Q Consensus 215 ~~~~~~p~~~I~Flf~~aEE~gl~GS~~fv~~h~ 248 (862)
++.+.+++++|.|+|..+||.|..|++.+++++.
T Consensus 135 ~~~~~~~~~~i~~i~~~~EE~g~~G~~~~~~~~~ 168 (470)
T 1lfw_A 135 KEAGFKPKKKIDFVLGTNEETNWVGIDYYLKHEP 168 (470)
T ss_dssp HHHTCCCSSEEEEEEESCTTTTCHHHHHHHHHSC
T ss_pred HHcCCCCCCCEEEEEecCcccCCccHHHHHHhCc
Confidence 9988788999999999999999999999997654
No 39
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=99.22 E-value=1.8e-10 Score=126.49 Aligned_cols=221 Identities=17% Similarity=0.220 Sum_probs=149.1
Q ss_pred HHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEEEeccCCCcccccccccCccccccccceEEEEEc
Q 002959 91 KHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRIL 170 (862)
Q Consensus 91 ~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~lg~~~~~~~~ve~d~~~~~~g~~~~~g~~~~~~~~~Y~~~~NVi~~i~ 170 (862)
+.|++|+++ |.+.|.+ +++++||.+++++++. ++++| ...|++++++
T Consensus 7 ~~l~~Lv~~-~s~sg~e--~~~~~~l~~~l~~~g~------~v~~d------------------------~~gnlia~~~ 53 (348)
T 1ylo_A 7 SLLKALSEA-DAIASSE--QEVRQILLEEAARLQK------EVRFD------------------------GLGSVLIRLN 53 (348)
T ss_dssp HHHHHHHHS-CCBTTBC--HHHHHHHHHHHHHTTC------CEEEC------------------------TTCCEEEECC
T ss_pred HHHHHHHcC-CCCCCch--HHHHHHHHHHHHhhCC------EEEEe------------------------cCCCEEEEec
Confidence 679999996 5555543 4689999999999973 34332 3458999887
Q ss_pred CCCCCCCCCCeEEEEeecCccC----------------------------------------------------------
Q 002959 171 PKYASEAGENAILVSSHIDTVS---------------------------------------------------------- 192 (862)
Q Consensus 171 g~~~~~~~~~~Vll~AH~Dsv~---------------------------------------------------------- 192 (862)
|+ ..+.|+++||+|+|+
T Consensus 54 g~-----~~~~vll~aH~DtV~~~v~~i~~~G~~~~~~~Gg~~~~~~~g~~v~~~~~~G~~~~h~~~~~~~~~~~~~l~i 128 (348)
T 1ylo_A 54 ES-----TGPKVMICAHMDEVGFMVRSISREGAIDVLPVGNVRMAARQLQPVRITTREECKIPGLLDGDRQGNDVSAMRV 128 (348)
T ss_dssp CC-----SSCEEEEEEECCCCEEEEEEECTTCCEEEEEESCCCGGGSSSEEEEEECTTCCEEEEEEEEEEETTEEEEEEE
T ss_pred CC-----CCceEEEEEcCCccceEEEEECCCCeEEEEecCCcchhhccCCEEEEEeCCCCCCcchhhhhccCCChhHEEE
Confidence 63 236799999999995
Q ss_pred --------------CCCC--------------------CCCChhHHHHHHHHHHHHHhccCCCCccEEEEEeCCcCCCCc
Q 002959 193 --------------AGEG--------------------AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLN 238 (862)
Q Consensus 193 --------------~spG--------------------A~Dd~sgva~~LE~ar~L~~~~~~p~~~I~Flf~~aEE~gl~ 238 (862)
...| +.||+.|+++++++++.+.+. .++.++.++|+.+||.|+.
T Consensus 129 d~G~~s~~~~~~~gi~~g~~i~~~~~~~~~~~~~~~~~~~D~k~g~aa~l~al~~l~~~--~~~~~~~~~~t~~EEvG~~ 206 (348)
T 1ylo_A 129 DIGARTYDEVMQAGIRPGDRVTFDTTFQVLPHQRVMGKAFDDRLSCYLLVTLLRELHDA--ELPAEVWLVASSSEEVGLR 206 (348)
T ss_dssp ECSCCSHHHHHHTTCCTTCEEEECCCCEEETTTEEEETTHHHHHHHHHHHHHHHHHTTC--CCSSEEEEEEESCCTTSSH
T ss_pred EecCCCHHHHHHcCCCCCCEEEEccccEEecCCEEEecCcccHHHHHHHHHHHHHhhhc--CCCceEEEEEEcccccchh
Confidence 0012 489999999999999998764 3668999999999999999
Q ss_pred chHHHHhcCCccCCccEEEEeecCcCCC---------------CeeEEE-eC--CCHHHHHHHHHHccCCCCcccccccc
Q 002959 239 GAHSFVTQHPWSTTIRVAVDLEAMGIGG---------------RSALFQ-AG--PNLWAVENFAAVAKYPSGQIIGQDLF 300 (862)
Q Consensus 239 GS~~fv~~h~~~~~v~a~iNLD~~G~gG---------------~~~lfq-~g--~~~~li~~~~~~a~~p~~~~l~~eif 300 (862)
|++...... ...+.|++|+...+. ..+... .+ .++.+++...++++. .+.....+..
T Consensus 207 Ga~~~~~~i----~~~~~i~~D~~~~~~~~~~~~~~~~~~~~G~~i~~~~~~~~~~~~l~~~~~~~a~~-~gi~~~~~~~ 281 (348)
T 1ylo_A 207 GGQTATRAV----SPDVAIVLDTACWAKNFDYGAANHRQIGNGPMLVLSDKSLIAPPKLTAWIETVAAE-IGVPLQADMF 281 (348)
T ss_dssp HHHHHHHHH----CCSEEEEECCCCCSSTTCCSTTCCCCTTSCCEEEEECSSCBCCHHHHHHHHHHHHH-HTCCCEEEEC
T ss_pred HHHHhhccc----CCCEEEEEeccccCCCCCCCccccccCCCCcEEEEeCCCCCCCHHHHHHHHHHHHH-cCCCeEEeec
Confidence 987655321 224678888776532 112111 11 256777666655421 1111111111
Q ss_pred cCCCCCCCCchHHHhh-hcCCeEEEEeecCCCCCCCCcCCccCCCChhHHHHHHHHHHHHHHHHhc
Q 002959 301 ASGVFETATDFQVYTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTAS 365 (862)
Q Consensus 301 ~~g~ips~TD~~~F~~-~~GIPgld~a~~~~~~~YHT~~Dt~d~Id~~sLq~~g~~~l~ll~~La~ 365 (862)
.+++||...+.. ..|+|.+++.- ... ..||+ -|.++.+.+....+.+.+++..++.
T Consensus 282 ----~~ggsDa~~~~~~~~gipt~~lg~-~~~-~~Hs~---~E~~~~~d~~~~~~ll~~~~~~l~~ 338 (348)
T 1ylo_A 282 ----SNGGTDGGAVHLTGTGVPTLVMGP-ATR-HGHCA---ASIADCRDILQMEQLLSALIQRLTR 338 (348)
T ss_dssp ----SSCCCHHHHHHTSTTCCCEEEEEC-CCB-SCSSS---CEEEEHHHHHHHHHHHHHHHHTCCH
T ss_pred ----CCCcchHHHHHHhcCCCCEEEECc-ccC-cCCCc---ceEeeHHHHHHHHHHHHHHHHHhhH
Confidence 246899998853 26999996643 333 38987 4567788888888888888876643
No 40
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=99.21 E-value=2.8e-11 Score=136.30 Aligned_cols=138 Identities=16% Similarity=0.166 Sum_probs=104.2
Q ss_pred HHHHHHHHHHHccCCCCCC--------CHHHHHHHHHHHHHHHhcccccCCcce-EEEEEEeccCCCcccccccccCccc
Q 002959 87 LEAMKHVKALTQLGPHAVG--------SDALDRALQYVLAASQKIKESKHWEAD-VEVDFFHAKSGANRVGTGVFKGKTL 157 (862)
Q Consensus 87 erA~~~L~~L~~igpr~~G--------S~~n~~a~~yL~~~l~~lg~~~~~~~~-ve~d~~~~~~g~~~~~g~~~~~~~~ 157 (862)
+++.+.|++|+++. .+.+ ++++.++++||.++|+++|. + ++.+
T Consensus 2 ~~~~~~l~~Lv~i~-s~s~~~~~~~p~~~~e~~~~~~l~~~l~~~G~------~~~~~~--------------------- 53 (417)
T 1fno_A 2 DKLLERFLHYVSLD-TQSKSGVRQVPSTEGQWKLLRLLKQQLEEMGL------VNITLS--------------------- 53 (417)
T ss_dssp CSHHHHHHHHHTSC-CBCCSSCSSSSSSHHHHHHHHHHHHHHHHHTC------EEEEEC---------------------
T ss_pred hHHHHHHHHhEEec-CCCCcccCCCCCCccHHHHHHHHHHHHHHcCC------CeEEEC---------------------
Confidence 35688999999974 3333 23667899999999999983 2 3321
Q ss_pred cccccceEEEEEcCCCCCCCCCCeEEEEeecCccCCC-------------------------------------------
Q 002959 158 IYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAG------------------------------------------- 194 (862)
Q Consensus 158 ~Y~~~~NVi~~i~g~~~~~~~~~~Vll~AH~Dsv~~s------------------------------------------- 194 (862)
...||+++++|+. ..+.+.|++.+|+|+||..
T Consensus 54 ---~~~nvia~~~g~~--~~~~~~i~l~aH~D~Vp~~~~~~~~p~~~~~~~g~~i~~~~g~~~~~~~~~~~~~~~~gd~~ 128 (417)
T 1fno_A 54 ---EKGTLMATLPANV--EGDIPAIGFISHVDTSPDFSGKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVLHQLLGQTL 128 (417)
T ss_dssp ---TTCCEEEEECCSS--CSCCCCEEEEEECCBCTTSCCSSCCCEEETTCCSSCEECSSSSCEECTTTCGGGGGCTTSCE
T ss_pred ---CCceEEEEECCCC--CCCCCceEEEEeccccCCCCCCCCCceEEecCCCCeecccccccccchhhcchhhhhcCCcE
Confidence 3469999998741 1135789999999999752
Q ss_pred ---CCC----CCChhHHHHHHHHHHHHHhccCCCCccEEEEEeCCcCCCCcchHHHHhcCCccCCccEEEEeecC
Q 002959 195 ---EGA----GDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAM 262 (862)
Q Consensus 195 ---pGA----~Dd~sgva~~LE~ar~L~~~~~~p~~~I~Flf~~aEE~gl~GS~~fv~~h~~~~~v~a~iNLD~~ 262 (862)
+|+ .||+.|+|++|++++.|++.+ .++++|+|+|+.+||.| .|++.++.+. .+..+.+++|..
T Consensus 129 l~grGat~l~~D~K~g~a~~l~a~~~l~~~~-~~~~~v~~~~~~~EE~g-~Ga~~~~~~~---~~~d~~i~~d~~ 198 (417)
T 1fno_A 129 ITTDGKTLLGADDKAGVAEIMTALAVLKGNP-IPHGDIKVAFTPDEEVG-KGAKHFDVEA---FGAQWAYTVDGG 198 (417)
T ss_dssp EECCSSSCCCHHHHHHHHHHHHHHHHHHSSS-CCCCCEEEEEESCGGGT-CTTTTCCHHH---HCCSEEEECCCC
T ss_pred EEcCCccccccccHHhHHHHHHHHHHHHhCC-CCCCcEEEEEEeccccC-CChhhhchhh---cCCCEEEEeCCC
Confidence 133 889999999999999999877 78899999999999998 8998776321 135677887754
No 41
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=99.20 E-value=6e-11 Score=132.52 Aligned_cols=142 Identities=19% Similarity=0.255 Sum_probs=106.1
Q ss_pred CHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEEEeccCCCcccccccccCccccccccce
Q 002959 85 SELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNH 164 (862)
Q Consensus 85 s~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~lg~~~~~~~~ve~d~~~~~~g~~~~~g~~~~~~~~~Y~~~~N 164 (862)
..+++.+.+++|.++ |...+ .+.++.+||.++|+++| ++++.. . ..+..|
T Consensus 4 ~~~~~~~~l~~lv~~-ps~s~--~e~~~~~~l~~~l~~~G------~~~~~~--~-------------------~~~~~n 53 (393)
T 1vgy_A 4 TETQSLELAKELISR-PSVTP--DDRDCQKLMAERLHKIG------FAAEEM--H-------------------FGNTKN 53 (393)
T ss_dssp CCSHHHHHHHHHHTS-CCBTT--CCTTHHHHHHHHHHTTT------CEEEEC--C-------------------BTTBCE
T ss_pred chHHHHHHHHHHhcC-CCCCC--CcHHHHHHHHHHHHHcC------CcEEEE--e-------------------cCCCcE
Confidence 346788999999996 43333 33468899999999998 233321 0 014679
Q ss_pred EEEEEcCCCCCCCCCCeEEEEeecCccCC---------------------CCCCCCChhHHHHHHHHHHHHHhccCCCCc
Q 002959 165 IVLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKN 223 (862)
Q Consensus 165 Vi~~i~g~~~~~~~~~~Vll~AH~Dsv~~---------------------spGA~Dd~sgva~~LE~ar~L~~~~~~p~~ 223 (862)
+++++ |+ +.+.|++.+|+|+||. ++|+.|++.|++++|++++.|.+.+.++++
T Consensus 54 v~a~~-g~-----~~~~i~l~~H~D~Vp~~~~~~w~~~Pf~~~~~~g~l~grG~~D~k~~~aa~l~a~~~l~~~~~~~~~ 127 (393)
T 1vgy_A 54 IWLRR-GT-----KAPVVCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLYGRGAADMKTSIACFVTACERFVAKHPNHQG 127 (393)
T ss_dssp EEEEE-CS-----SSSEEEEEEECCBCCCCCGGGSSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSS
T ss_pred EEEEE-CC-----CCCEEEEEcccCCcCCCCcccCCCCCCceEEECCEEEecCcccchHHHHHHHHHHHHHHHhcCCCCC
Confidence 99998 63 2468999999999985 368889999999999999999987778899
Q ss_pred cEEEEEeCCcCCC-CcchHHHHhcCCc-cCCccEEEEeecC
Q 002959 224 AVIFLFNTGEEEG-LNGAHSFVTQHPW-STTIRVAVDLEAM 262 (862)
Q Consensus 224 ~I~Flf~~aEE~g-l~GS~~fv~~h~~-~~~v~a~iNLD~~ 262 (862)
+|+|+|+.+||.+ +.|++.+++.... ..++.+++..|..
T Consensus 128 ~v~~~~~~~EE~~~~~Ga~~~~~~~~~~~~~~d~~i~~e~~ 168 (393)
T 1vgy_A 128 SIALLITSDEEGDALDGTTKVVDVLKARDELIDYCIVGEPT 168 (393)
T ss_dssp EEEEEEESCSSSCCTTSHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred cEEEEEEeccccCCcCCHHHHHHHHHhcCcCCCEEEEeCCC
Confidence 9999999999985 6899988753211 1245566666543
No 42
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=99.20 E-value=6.4e-11 Score=132.53 Aligned_cols=153 Identities=20% Similarity=0.243 Sum_probs=111.6
Q ss_pred CCCCCHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEEEeccCCCcccccccccCcccccc
Q 002959 81 RRGFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYS 160 (862)
Q Consensus 81 ~~~fs~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~lg~~~~~~~~ve~d~~~~~~g~~~~~g~~~~~~~~~Y~ 160 (862)
..+.+.+++.+.+++|.++ |.+ |..+.++++||.++|+++| ++++.+..... .-.
T Consensus 18 ~~~~~~~~~~~~l~~L~~i-ps~--s~~E~~~~~~l~~~l~~~G------~~v~~~~~~~~----------------~~~ 72 (396)
T 3rza_A 18 QGMINEQRLLNTFLELVQI-DSE--TGNESTIQPILKEKFIALG------LDVKEDEAAKH----------------PKL 72 (396)
T ss_dssp -CCSCHHHHHHHHHHHHTS-CCB--TTCTTTHHHHHHHHHHHTT------CEEEECSGGGS----------------TTC
T ss_pred EEeecHHHHHHHHHHHeec-CCC--CcCHHHHHHHHHHHHHHCC------CEEEEeccccc----------------cCC
Confidence 3567899999999999997 333 3344689999999999998 34443210000 001
Q ss_pred ccceEEEEEcCCCCCCCCCCeEEEEeecCccCC---------------CCCC----CCChhHHHHHHHHHHHHHhccCCC
Q 002959 161 DLNHIVLRILPKYASEAGENAILVSSHIDTVSA---------------GEGA----GDCSSCVAVMLELARVMSQWAHEF 221 (862)
Q Consensus 161 ~~~NVi~~i~g~~~~~~~~~~Vll~AH~Dsv~~---------------spGA----~Dd~sgva~~LE~ar~L~~~~~~p 221 (862)
...||+++++|+. +..+.+.|++.||+|+||. ++|+ .||+.|++++|++++.|.+.+. +
T Consensus 73 ~~~nvia~~~g~~-~~~~~~~i~l~aH~D~vp~g~~~~p~~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~-~ 150 (396)
T 3rza_A 73 GANNLVCTMNSTI-EEGEVPKLYLTSHMDTVVPAINVKPIVKDDGYIYSDGTTILGADDKAGLAAMLEVLQVIKEQQI-P 150 (396)
T ss_dssp SSCCEEEEECCCC-C---CCCEEEEEECCBCSSCSSCCCEECTTSEEECCSSSCCCHHHHHHHHHHHHHHHHHHHHTC-C
T ss_pred CCceEEEEECCcC-CCCCCCeEEEEEECCccCCCCCcceEEecCCEEECCCccccCcccHHHHHHHHHHHHHHHhcCC-C
Confidence 4679999998731 0134578999999999963 4676 5999999999999999998754 6
Q ss_pred CccEEEEEeCCcCCCCcchHHHHhcCCccCCccEEEEeecCc
Q 002959 222 KNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMG 263 (862)
Q Consensus 222 ~~~I~Flf~~aEE~gl~GS~~fv~~h~~~~~v~a~iNLD~~G 263 (862)
+.+|.|+|..+||.|..|++.+..+. .+....+++|..+
T Consensus 151 ~~~v~~~~~~~EE~g~~Ga~~~~~~~---~~~~~~~~~~~~~ 189 (396)
T 3rza_A 151 HGQIQFVITVGEESGLIGAKELNSEL---LDADFGYAIDASA 189 (396)
T ss_dssp CCCEEEEEESCGGGTSHHHHHCCGGG---CCCSEEEEEEESS
T ss_pred CCCEEEEEEcccccccHhHhhhchhh---cccceEEEEecCC
Confidence 78999999999999999999886432 2345667777544
No 43
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=99.19 E-value=1.2e-10 Score=134.53 Aligned_cols=137 Identities=16% Similarity=0.242 Sum_probs=104.9
Q ss_pred CHHHHHHHHHHHHccCCCCCCC----------HHHHHHHHHHHHHHHhcccccCCcceEEEEEEeccCCCcccccccccC
Q 002959 85 SELEAMKHVKALTQLGPHAVGS----------DALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKG 154 (862)
Q Consensus 85 s~erA~~~L~~L~~igpr~~GS----------~~n~~a~~yL~~~l~~lg~~~~~~~~ve~d~~~~~~g~~~~~g~~~~~ 154 (862)
..+++.+.+++|.++ |-+.+. ++..++.+|+.++|+++|. +++.
T Consensus 32 ~~~~~~~~l~~lv~i-ps~s~~e~~~~~~p~g~~~~~~~~~l~~~l~~~G~------~~~~------------------- 85 (492)
T 3khx_A 32 YEDQIINDLKGLLAI-ESVRDDAKASEDAPVGPGPRKALDYMYEIAHRDGF------TTHD------------------- 85 (492)
T ss_dssp THHHHHHHHHHHHTS-CCCCCSSSCCSSSTTCHHHHHHHHHHHHHHHHTTC------EEEE-------------------
T ss_pred hHHHHHHHHHHHhcC-CCCCCCcccccccccchHHHHHHHHHHHHHHHcCC------cceE-------------------
Confidence 357888999999997 333332 2446899999999999983 3321
Q ss_pred ccccccccceEEEEEcCCCCCCCCCCeEEEEeecCccCC-------------------CCCCCCChhHHHHHHHHHHHHH
Q 002959 155 KTLIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSA-------------------GEGAGDCSSCVAVMLELARVMS 215 (862)
Q Consensus 155 ~~~~Y~~~~NVi~~i~g~~~~~~~~~~Vll~AH~Dsv~~-------------------spGA~Dd~sgva~~LE~ar~L~ 215 (862)
..|+++.++.. ...+.|++.+|+|+||. ++|+.||++|++++|++++.|+
T Consensus 86 -------~~~~~~~~~~g----~~~~~i~l~~H~D~vp~~~~w~~~Pf~~~~~~g~l~GrG~~D~Kg~~a~~l~a~~~l~ 154 (492)
T 3khx_A 86 -------VDHIAGRIEAG----KGNDVLGILCHVDVVPAGDGWDSNPFEPVVTEDAIIARGTLDDKGPTIAAYYAIKILE 154 (492)
T ss_dssp -------ETTTEEEEEEE----CSSCEEEEEEECCCCCCCSCCSSCTTSCEECSSEEESTTTTTTHHHHHHHHHHHHHHH
T ss_pred -------eCCEEEEEEeC----CCCCEEEEEEeccCCCCCCCcccCCCceEEECCEEEecCCccCcHHHHHHHHHHHHHH
Confidence 12344455421 23578999999999985 3799999999999999999999
Q ss_pred hccCCCCccEEEEEeCCcCCCCcchHHHHhcCCccCCccEEEEeec
Q 002959 216 QWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEA 261 (862)
Q Consensus 216 ~~~~~p~~~I~Flf~~aEE~gl~GS~~fv~~h~~~~~v~a~iNLD~ 261 (862)
+.+.+++++|.|+|..+||.|..|++.++++++. ....+..|.
T Consensus 155 ~~~~~~~~~i~~~~~~~EE~g~~g~~~~~~~~~~---~~~~~~~d~ 197 (492)
T 3khx_A 155 DMNVDWKKRIHMIIGTDEESDWKCTDRYFKTEEM---PTLGFAPDA 197 (492)
T ss_dssp HTTCCCSSEEEEEEECCTTCCCCTTSHHHHHSCC---CSEEECSSC
T ss_pred HcCCCCCCCEEEEEECCccCCCcCHHHHHHhCcC---CCEEEecCC
Confidence 9887889999999999999999999999987754 334444443
No 44
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=99.18 E-value=9.7e-11 Score=134.40 Aligned_cols=146 Identities=14% Similarity=0.194 Sum_probs=110.4
Q ss_pred HHHHHHHHHHHccCCCCCCC--------HHHHHHHHHHHHHHHhcccccCCcceEEEEEEeccCCCcccccccccCcccc
Q 002959 87 LEAMKHVKALTQLGPHAVGS--------DALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLI 158 (862)
Q Consensus 87 erA~~~L~~L~~igpr~~GS--------~~n~~a~~yL~~~l~~lg~~~~~~~~ve~d~~~~~~g~~~~~g~~~~~~~~~ 158 (862)
+++.+.|++|.++ |-..+. .+..++.+|+.++|+++|.+ ..++++. ...
T Consensus 18 ~~~~~~l~~lv~i-ps~s~~~~~~~~~~~~e~~~~~~i~~~l~~~G~~---~~~~~~~--~~~----------------- 74 (472)
T 3pfe_A 18 EEILPSLCDYIKI-PNKSPHFDAKWEEHGYMEQAVNHIANWCKSHAPK---GMTLEIV--RLK----------------- 74 (472)
T ss_dssp HTHHHHHHHHHTC-CCBCGGGCTTHHHHCHHHHHHHHHHHHHHHTCCT---TCEEEEE--CCT-----------------
T ss_pred HHHHHHHHHHhCC-CCcCCCccccccccchHHHHHHHHHHHHHHcCCC---CcceEEE--ecC-----------------
Confidence 4578889999997 333221 12468999999999999842 1223321 100
Q ss_pred ccccceEEEEEcCCCCCCCCCCeEEEEeecCccCC---------------------CCCCCCChhHHHHHHHHHHHHHhc
Q 002959 159 YSDLNHIVLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQW 217 (862)
Q Consensus 159 Y~~~~NVi~~i~g~~~~~~~~~~Vll~AH~Dsv~~---------------------spGA~Dd~sgva~~LE~ar~L~~~ 217 (862)
....||+++++|+ +.+.|++.+|+|+||. ++|+.||+.|++++|++++.|++.
T Consensus 75 -~~~~~v~a~~~g~-----~~~~i~l~~H~D~vp~~~~w~~~~~Pf~~~~~~g~~~grG~~D~K~~~a~~l~a~~~l~~~ 148 (472)
T 3pfe_A 75 -NRTPLLFMEIPGQ-----IDDTVLLYGHLDKQPEMSGWSDDLHPWKPVLKNGLLYGRGGADDGYSAYASLTAIRALEQQ 148 (472)
T ss_dssp -TSCCEEEEEECCS-----EEEEEEEEEECCBCCCCSCCCTTCBTTBCEEETTEEESTTCCCCCHHHHHHHHHHHHHHHT
T ss_pred -CCCcEEEEEEcCC-----CCCeEEEEccccCCCCcCCCCcCCCCCceEEECCEEEEeCcccCcHHHHHHHHHHHHHHHc
Confidence 0357999999772 3478999999998873 379999999999999999999987
Q ss_pred cCCCCccEEEEEeCCcCCCCcchHHHHhcCCc-cCCccEEEEeecC
Q 002959 218 AHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPW-STTIRVAVDLEAM 262 (862)
Q Consensus 218 ~~~p~~~I~Flf~~aEE~gl~GS~~fv~~h~~-~~~v~a~iNLD~~ 262 (862)
+..+. +|+|+|..+||.|..|++.++++++. .+++.+++.+|..
T Consensus 149 ~~~~~-~v~~~~~~~EE~g~~g~~~~~~~~~~~~~~~d~~~~~~~~ 193 (472)
T 3pfe_A 149 GLPYP-RCILIIEACEESGSYDLPFYIELLKERIGKPSLVICLDSG 193 (472)
T ss_dssp TCCCE-EEEEEEESCGGGTSTTHHHHHHHHHHHHCCCSEEEEECCB
T ss_pred CCCCC-cEEEEEEeCCCCCChhHHHHHHHhHhhccCCCEEEEeCCC
Confidence 76666 99999999999999999999976532 2468889999843
No 45
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=99.14 E-value=2.5e-10 Score=125.92 Aligned_cols=139 Identities=19% Similarity=0.209 Sum_probs=104.3
Q ss_pred HHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEEEeccCCCcccccccccCccccccccceEE
Q 002959 87 LEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIV 166 (862)
Q Consensus 87 erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~lg~~~~~~~~ve~d~~~~~~g~~~~~g~~~~~~~~~Y~~~~NVi 166 (862)
++..+.+++|.++ |-+.+ .+.++++||.++|+++|. +++.. . +.+..|++
T Consensus 3 ~~~~~~~~~L~~~-ps~s~--~e~~~~~~l~~~l~~~g~------~~~~~--~-------------------~~~~~n~~ 52 (377)
T 3isz_A 3 EKVVSLAQDLIRR-PSISP--NDEGCQQIIAERLEKLGF------QIEWM--P-------------------FNDTLNLW 52 (377)
T ss_dssp HHHHHHHHHHHTS-CCBTT--CCTTHHHHHHHHHHHTTC------EEEEC--C-------------------BTTBCEEE
T ss_pred hHHHHHHHHHhcC-CCCCC--ChhhHHHHHHHHHHHCCC------ceEEe--e-------------------cCCCceEE
Confidence 5678899999986 43333 335689999999999983 33321 0 01467999
Q ss_pred EEEcCCCCCCCCCCeEEEEeecCccCC---------------------CCCCCCChhHHHHHHHHHHHHHhccCCCCccE
Q 002959 167 LRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAV 225 (862)
Q Consensus 167 ~~i~g~~~~~~~~~~Vll~AH~Dsv~~---------------------spGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I 225 (862)
+++ |+ +.+.|++.||+|+||. ++|+.|++.|++++|++++.+.+.+.+++++|
T Consensus 53 a~~-g~-----~~~~i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~g~~~~l~a~~~l~~~~~~~~~~v 126 (377)
T 3isz_A 53 AKH-GT-----SEPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTI 126 (377)
T ss_dssp EEE-ES-----SSCEEEEEEECCBCCCCCGGGCSSCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEE
T ss_pred EEe-CC-----CCCEEEEeccccccCCCCcccCCCCCCCcEEECCEEEeCChhhhhHHHHHHHHHHHHHHHhCCCCCceE
Confidence 988 53 3468999999999985 26788999999999999999998777788999
Q ss_pred EEEEeCCcCCCC-cchHHHHhcCCc-cCCccEEEEeec
Q 002959 226 IFLFNTGEEEGL-NGAHSFVTQHPW-STTIRVAVDLEA 261 (862)
Q Consensus 226 ~Flf~~aEE~gl-~GS~~fv~~h~~-~~~v~a~iNLD~ 261 (862)
+|+|..+||.|. .||+.+++.... ..++.+++..|.
T Consensus 127 ~~~~~~~EE~~~~~G~~~~~~~~~~~~~~~d~~~~~e~ 164 (377)
T 3isz_A 127 ALLITSDEEATAKDGTIHVVETLMARDEKITYCMVGEP 164 (377)
T ss_dssp EEEEESCSSSCCSSSHHHHHHHHHHTTCCCCEEEECCC
T ss_pred EEEEEcccccCccccHHHHHHHHHhcCCCCCEEEEcCC
Confidence 999999999987 699998753211 124566666553
No 46
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=99.14 E-value=1.2e-10 Score=134.45 Aligned_cols=140 Identities=16% Similarity=0.233 Sum_probs=108.6
Q ss_pred CCCCHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEEEeccCCCcccccccccCccccccc
Q 002959 82 RGFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSD 161 (862)
Q Consensus 82 ~~fs~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~lg~~~~~~~~ve~d~~~~~~g~~~~~g~~~~~~~~~Y~~ 161 (862)
.+++.+++++.+++|.++ |++.+. +.++.+||.++++++|. +++.| .
T Consensus 9 ~~~~~~~~~~~~~~L~~i-ps~s~~--e~~~~~~l~~~l~~~G~------~v~~~------------------------~ 55 (490)
T 3mru_A 9 STLSPAPLWQFFDKICSI-PHPSKH--EEALAQYIVTWATEQGF------DVRRD------------------------P 55 (490)
T ss_dssp GGSSSHHHHHHHHHHHHS-CCBTTC--CTTHHHHHHHHHHHTTC------EEEEC------------------------T
T ss_pred hccCHHHHHHHHHHHhCC-CCCCCC--HHHHHHHHHHHHHHcCC------EEEEc------------------------C
Confidence 357889999999999997 666554 46899999999999982 33321 2
Q ss_pred cceEEEEEcCCCCCCCCCCeEEEEeecCccCCC------------------------CCCC---CChhHHHHHHHHHHHH
Q 002959 162 LNHIVLRILPKYASEAGENAILVSSHIDTVSAG------------------------EGAG---DCSSCVAVMLELARVM 214 (862)
Q Consensus 162 ~~NVi~~i~g~~~~~~~~~~Vll~AH~Dsv~~s------------------------pGA~---Dd~sgva~~LE~ar~L 214 (862)
..||+++++|+. +..+.+.|++.+|+|+||.. +|+. ||+.|+|++|++++
T Consensus 56 ~~nv~a~~~g~~-g~~~~~~v~l~aH~D~vp~~~~~~~~~w~~~p~~~~~~~g~l~g~G~~lgaD~k~g~a~~l~~l~-- 132 (490)
T 3mru_A 56 TGNVFIKKPATP-GMENKKGVVLQAHIDMVPQKNEDTDHDFTQDPIQPYIDGEWVTAKGTTLGADNGIGMASCLAVLA-- 132 (490)
T ss_dssp TCCEEEEECCCT-TCTTCCCEEEEEECCBCCCBCTTSCCCTTTCCCCEEEETTEEEETTBCCCHHHHTTHHHHHHHHH--
T ss_pred CCeEEEEEcCCC-CCCCCCeEEEEeccCCCCCCCCCcccccccCCceEEeeCCeEecCCCccCCCCHHHHHHHHHHHH--
Confidence 459999998741 11356789999999999753 5776 99999999999763
Q ss_pred HhccCCCCccEEEEEeCCcCCCCcchHHHHhcCCccCCccEEEEeecC
Q 002959 215 SQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAM 262 (862)
Q Consensus 215 ~~~~~~p~~~I~Flf~~aEE~gl~GS~~fv~~h~~~~~v~a~iNLD~~ 262 (862)
....++.+|.|+|+.+||.|+.|++.++++. .+.+.++|+|..
T Consensus 133 --~~~~~~~~v~~~~~~~EE~g~~Ga~~~~~~~---~~~~~~~~~d~~ 175 (490)
T 3mru_A 133 --SKEIKHGPIEVLLTIDEEAGMTGAFGLEAGW---LKGDILLNTDSE 175 (490)
T ss_dssp --CSSCCCCSEEEEEESCSSSTTGGGGTCCSSS---CCSSEEEECCCC
T ss_pred --hCCCCCCCEEEEEEcccccccHhHHHhhhcc---cCCCEEEEcCCC
Confidence 2345678999999999999999999988532 246788899854
No 47
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=99.09 E-value=1.2e-09 Score=123.32 Aligned_cols=135 Identities=14% Similarity=0.214 Sum_probs=102.7
Q ss_pred HHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEEEeccCCCcccccccccCccccccccceEE
Q 002959 87 LEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIV 166 (862)
Q Consensus 87 erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~lg~~~~~~~~ve~d~~~~~~g~~~~~g~~~~~~~~~Y~~~~NVi 166 (862)
+++.+.+++|.++ |.+.+ .+.++.+||.++|+++|. +++.+. ...|++
T Consensus 28 ~~~i~~~~~l~~i-ps~s~--~e~~~~~~l~~~l~~~G~------~v~~~~-----------------------~~~~l~ 75 (418)
T 1xmb_A 28 DWMVKIRRKIHEN-PELGY--EELETSKLIRSELELIGI------KYRYPV-----------------------AITGVI 75 (418)
T ss_dssp HHHHHHHHHHHHS-CCCTT--CCHHHHHHHHHHHHHHTC------CEEEEE-----------------------TTTEEE
T ss_pred HHHHHHHHHHHhC-CCCCC--ChHHHHHHHHHHHHHcCC------eeEecc-----------------------CCcEEE
Confidence 6788899999996 44443 346789999999999983 344321 256899
Q ss_pred EEEcCCCCCCCCCCeEEEEeecCccCCCC-----------CC---CCChhHHHHHHHHHHHHHhccCCCCccEEEEEeCC
Q 002959 167 LRILPKYASEAGENAILVSSHIDTVSAGE-----------GA---GDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTG 232 (862)
Q Consensus 167 ~~i~g~~~~~~~~~~Vll~AH~Dsv~~sp-----------GA---~Dd~sgva~~LE~ar~L~~~~~~p~~~I~Flf~~a 232 (862)
++++|+ .+ +.|++.+|+|+||... |. .+.+.|++++|++++.|++.+.+++++|+|+|..+
T Consensus 76 a~~~~~----~~-~~i~l~aH~D~vp~~~~~~~pf~~~~~g~~~g~G~d~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~ 150 (418)
T 1xmb_A 76 GYIGTG----EP-PFVALRADMDALPIQEGVEWEHKSKIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVVLIFQPA 150 (418)
T ss_dssp EEEESS----SS-CEEEEEEECCCBSCCCCCCSTTCCSSTTCBCCSSHHHHHHHHHHHHHHHHHTGGGCSSEEEEEEECC
T ss_pred EEEcCC----CC-CEEEEEecccccCCCCCCCCCcccCCCCceEeCCchHHHHHHHHHHHHHHhccccCCceEEEEEecc
Confidence 999873 23 7899999999998531 21 11138999999999999998777899999999999
Q ss_pred cCCCCcchHHHHhcCCccCCccEEEEee
Q 002959 233 EEEGLNGAHSFVTQHPWSTTIRVAVDLE 260 (862)
Q Consensus 233 EE~gl~GS~~fv~~h~~~~~v~a~iNLD 260 (862)
|| |..|++.++++.. .+++.++++++
T Consensus 151 EE-g~~G~~~~~~~g~-~~~~d~~i~~~ 176 (418)
T 1xmb_A 151 EE-GLSGAKKMREEGA-LKNVEAIFGIH 176 (418)
T ss_dssp TT-TTCHHHHHHHTTT-TTTEEEEEEEE
T ss_pred cc-ccccHHHHHHcCC-cCCCCEEEEEe
Confidence 99 9999999996542 23466777754
No 48
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=99.09 E-value=1.6e-10 Score=126.39 Aligned_cols=223 Identities=14% Similarity=0.105 Sum_probs=144.7
Q ss_pred HHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEEEeccCCCcccccccccCccccccccceEEEE
Q 002959 89 AMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLR 168 (862)
Q Consensus 89 A~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~lg~~~~~~~~ve~d~~~~~~g~~~~~g~~~~~~~~~Y~~~~NVi~~ 168 (862)
..+.|++|+++ |.+.|.+ +.+++||.+++++++.+ +++|..... + .+..|++++
T Consensus 19 ~~~~l~~Lv~i-~s~sg~e--~~v~~~l~~~l~~~g~~------v~~d~~~~~-------~----------~~~gnlia~ 72 (321)
T 3cpx_A 19 GMQLLKELCSI-HAPSGNE--EPLKDFILEYIRSNAGS------WSYQPVIYA-------D----------NDLQDCIVL 72 (321)
T ss_dssp HHHHHHHHHHS-CCBTTCC--HHHHHHHHHHHHHHGGG------SSSCCEEEC-------S----------GGGTTCEEE
T ss_pred HHHHHHHHHcC-CCCCCCH--HHHHHHHHHHHHhhCCe------EEEcccccc-------c----------cCCccEEEE
Confidence 47789999997 5555543 46799999999999853 222110000 0 035789998
Q ss_pred EcCCCCCCCCCCeEEEEeecCccC-----------C---------------------------------------CCC--
Q 002959 169 ILPKYASEAGENAILVSSHIDTVS-----------A---------------------------------------GEG-- 196 (862)
Q Consensus 169 i~g~~~~~~~~~~Vll~AH~Dsv~-----------~---------------------------------------spG-- 196 (862)
++| . +.|++.||+|+|+ . .+|
T Consensus 73 ~~g------~-~~ill~aH~DtV~~~v~~i~~~~~~Gg~~~~~~~~v~~~~~~g~~~gvi~~~ee~~~ida~~lv~~Gd~ 145 (321)
T 3cpx_A 73 VFG------N-PRTAVFAHMDSIGFTVSYNNHLHPIGSPSAKEGYRLVGKDSNGDIEGVLKIVDEEWMLETDRLIDRGTE 145 (321)
T ss_dssp EES------S-CSEEEEEECCBCEEEECSTTBEEEESSCCCCTTCEEEEEETTEEEEEEEECGGGSCEEECSSCCCTTCE
T ss_pred ecC------C-ceEEEEecCCcCCeEecccCCeEEcCChhhcccCEEEEEeCCCceeeeECCccHHHHHHHHhcCCCCCE
Confidence 754 2 4699999999983 0 122
Q ss_pred -----------------CCCChhHHHHHHHHHHHHHhccCCCCccEEEEEeCCcCCCCcchHHHHhcCCccCCccEEEEe
Q 002959 197 -----------------AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDL 259 (862)
Q Consensus 197 -----------------A~Dd~sgva~~LE~ar~L~~~~~~p~~~I~Flf~~aEE~gl~GS~~fv~~h~~~~~v~a~iNL 259 (862)
+.||++||++++|+++.+. + ++++|++.||.|+.|++....-.....+..++|++
T Consensus 146 v~~~~~~~~~~g~i~~~~~D~k~G~aa~l~al~~l~-------~-i~~~~t~~EEvG~~Ga~~a~~~~~~~~~~~~~i~~ 217 (321)
T 3cpx_A 146 VTFKPDFREEGDFILTPYLDDRLGVWTALELAKTLE-------H-GIIAFTCWEEHGGGSVAYLARWIYETFHVKQSLIC 217 (321)
T ss_dssp EEECCCCEEETTEEECTTHHHHHHHHHHHHHTTTCC-------S-EEEEEESSTTTTCCSHHHHHHHHHHHHCCCEEEEC
T ss_pred EEeccCcEEEcCEEEEcCCcCHHHHHHHHHHHHHhc-------C-cEEEEECCccCchhcchhhhhccccccCCCEEEEE
Confidence 5899999999999998754 2 99999999999999998632100001234678999
Q ss_pred ecCcCC-------CCeeEEEeC--CCHHHHHHHHHHccCCCCcccccccccCCCCCCCCchHHHhh-hcCCeEEEEeecC
Q 002959 260 EAMGIG-------GRSALFQAG--PNLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYTE-VAGLSGLDFAYTD 329 (862)
Q Consensus 260 D~~G~g-------G~~~lfq~g--~~~~li~~~~~~a~~p~~~~l~~eif~~g~ips~TD~~~F~~-~~GIPgld~a~~~ 329 (862)
|....+ |..+-...+ +++.+.+..++.++. .+...-.+.+ .+++||-..+.. ..|+|.+++....
T Consensus 218 D~~~~~~~~~~~~G~~i~~~~~~~~~~~l~~~~~~~a~~-~gi~~q~~~~----~~GGsD~~~~~~s~~Gipt~~lG~~~ 292 (321)
T 3cpx_A 218 DITWVTEGVEAGKGVAISMRDRMIPRKKYVNRIIELARQ-TDIPFQLEVE----GAGASDGRELQLSPYPWDWCFIGAPE 292 (321)
T ss_dssp CCEECCSSSCTTSCEEEEEESSSCCCHHHHHHHHHHHTT-SSCCEEEEEC----SSCCCHHHHHHHSSSCCBCCBEECEE
T ss_pred eCccccCCcccCCCcEEEECCCCCCCHHHHHHHHHHHHH-cCCCEEEEeC----CCCCccHHHHHHhCCCCCEEEEchhh
Confidence 987643 222212112 267788877776543 2221111111 457899888842 3799999776543
Q ss_pred CCCCCCCcCCccCCCChhHHHHHHHHHHHHHHH
Q 002959 330 KSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQ 362 (862)
Q Consensus 330 ~~~~YHT~~Dt~d~Id~~sLq~~g~~~l~ll~~ 362 (862)
...||+. |.++.+.+....+.+.+++..
T Consensus 293 --~~~Hs~~---E~~~~~dl~~~~~ll~~~~~~ 320 (321)
T 3cpx_A 293 --KDAHTPN---ECVHKKDIESMVGLYKYLMEK 320 (321)
T ss_dssp --BSTTSTT---CEEEHHHHHHHHHHHHHHHHH
T ss_pred --cccchhh---hheeHHHHHHHHHHHHHHHHh
Confidence 3379855 456677788877777777654
No 49
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=99.08 E-value=3.6e-10 Score=125.23 Aligned_cols=130 Identities=19% Similarity=0.217 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHHccCCCCCCCH---HHHHHHHHHHHHHHhcccccCCcceEEEEEEeccCCCcccccccccCcccccccc
Q 002959 86 ELEAMKHVKALTQLGPHAVGSD---ALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDL 162 (862)
Q Consensus 86 ~erA~~~L~~L~~igpr~~GS~---~n~~a~~yL~~~l~~lg~~~~~~~~ve~d~~~~~~g~~~~~g~~~~~~~~~Y~~~ 162 (862)
.+++.+.+++|.++. ...... ++.++.+||.++|+ | ++++.+... ...
T Consensus 8 ~~~~~~~l~~l~~ip-s~s~~~~~~~e~~~~~~l~~~l~--G------~~~~~~~~~--------------------~~~ 58 (369)
T 2f7v_A 8 LASTLEHLETLVSFD-TRNPPRAIAAEGGIFDYLRAQLP--G------FQVEVIDHG--------------------DGA 58 (369)
T ss_dssp HHHHHHHHHHHHHSC-CBTTTTCCCSSSHHHHHHHTTCT--T------CEEEEEECS--------------------TTC
T ss_pred hHHHHHHHHHHhCCC-CcCCCCCCccHHHHHHHHHHHhC--C------CceEEEEcC--------------------CCc
Confidence 478899999999973 333112 44688999999988 5 344443210 035
Q ss_pred ceEEEEEcCCCCCCCCCCeEEEEeecCccCC-------------------CCCCCCChhHHHHHHHHHHHHHhccCCCCc
Q 002959 163 NHIVLRILPKYASEAGENAILVSSHIDTVSA-------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKN 223 (862)
Q Consensus 163 ~NVi~~i~g~~~~~~~~~~Vll~AH~Dsv~~-------------------spGA~Dd~sgva~~LE~ar~L~~~~~~p~~ 223 (862)
.|+++ ++|+ +.|++.+|+|+||. ++|+.||+.|++++|++++. +++
T Consensus 59 ~~~~a-~~g~-------~~i~l~~H~D~vp~~~~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~-------~~~ 123 (369)
T 2f7v_A 59 VSLYA-VRGT-------PKYLFNVHLDTVPDSPHWSADPHVMRRTEDRVIGLGVCDIKGAAAALVAAANA-------GDG 123 (369)
T ss_dssp EEEEE-EESC-------CSEEEEEECCBCCCCSSCSSCTTSCEECSSEEECTTTTTTHHHHHHHHHHHTT-------CCC
T ss_pred eEEEE-EcCC-------CeEEEEeeecccCCCCCCCCCCCCcEEECCEEEecccccccHHHHHHHHHHhc-------CCC
Confidence 79999 8762 56999999999974 37899999999999999976 678
Q ss_pred cEEEEEeCCcCC-CCcchHHHHhcCCccCCccEEEEeecC
Q 002959 224 AVIFLFNTGEEE-GLNGAHSFVTQHPWSTTIRVAVDLEAM 262 (862)
Q Consensus 224 ~I~Flf~~aEE~-gl~GS~~fv~~h~~~~~v~a~iNLD~~ 262 (862)
+|+|+|+.+||. |+.|++.++++.. +..+++++|..
T Consensus 124 ~v~~~~~~~EE~~g~~G~~~~~~~~~---~~d~~i~~e~~ 160 (369)
T 2f7v_A 124 DAAFLFSSDEEANDPRCIAAFLARGL---PYDAVLVAEPT 160 (369)
T ss_dssp CEEEEEESCTTSSSCCHHHHHHTTCC---CCSEEEECCCS
T ss_pred CEEEEEEeCcccCCCcCHHHHHhcCC---CCCEEEECCCC
Confidence 999999999999 8899999996554 56778888864
No 50
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=99.03 E-value=7.9e-10 Score=127.13 Aligned_cols=140 Identities=14% Similarity=0.224 Sum_probs=106.1
Q ss_pred CCCHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEEEeccCCCcccccccccCcccccccc
Q 002959 83 GFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDL 162 (862)
Q Consensus 83 ~fs~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~lg~~~~~~~~ve~d~~~~~~g~~~~~g~~~~~~~~~Y~~~ 162 (862)
+++.+++.+.+++|.++ |.+.+ .+.++.+||.++++++| ++++.+ ..
T Consensus 7 ~~~~~~~~~~~~~l~~i-ps~s~--~e~~~~~~l~~~l~~~G------~~~~~~------------------------~~ 53 (487)
T 2qyv_A 7 SLQPKLLWQWFDQICAI-PHPSY--KEEQLAQFIINWAKTKG------FFAERD------------------------EV 53 (487)
T ss_dssp CSSSHHHHHHHHHHHHS-CCBTT--CCHHHHHHHHHHHHHTT------CEEEEC------------------------TT
T ss_pred ccCHHHHHHHHHHHHcC-CCCCC--cHHHHHHHHHHHHHHcC------CEEEEc------------------------CC
Confidence 46778999999999997 45443 34679999999999998 233331 24
Q ss_pred ceEEEEEcCCCCCCCCCCeEEEEeecCccCCC------------------------CCCC---CChhHHHHHHHHHHHHH
Q 002959 163 NHIVLRILPKYASEAGENAILVSSHIDTVSAG------------------------EGAG---DCSSCVAVMLELARVMS 215 (862)
Q Consensus 163 ~NVi~~i~g~~~~~~~~~~Vll~AH~Dsv~~s------------------------pGA~---Dd~sgva~~LE~ar~L~ 215 (862)
.|++++++|+. +..+.+.|++.+|+|+||.. +|+. ||+.|++++|++++.
T Consensus 54 ~nv~a~~~g~~-g~~~~~~i~l~aH~D~vp~~~~~~~~~w~~~p~~~~~~dg~l~g~G~~lgaD~k~g~a~~l~a~~~-- 130 (487)
T 2qyv_A 54 GNVLIRKPATV-GMENRKPVVLQAHLDMVPQANEGTNHNFDQDPILPYIDGDWVKAKGTTLGADNGIGMASALAVLES-- 130 (487)
T ss_dssp CCEEEEECCCT-TCTTBCCEEEEEESCBCCC----------CCCCCEEECSSEEEETTBCCCHHHHHHHHHHHHHHHC--
T ss_pred CcEEEEeCCCC-CCCCCCeEEEEccCCccCCCCCCCccccccCCeeEEeeCCEEEeCCCCcCCcCHHHHHHHHHHHHh--
Confidence 59999998731 00245789999999999863 3776 999999999999973
Q ss_pred hccCCCCccEEEEEeCCcCCCCcchHHHHhcCCccCCccEEEEeecCc
Q 002959 216 QWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMG 263 (862)
Q Consensus 216 ~~~~~p~~~I~Flf~~aEE~gl~GS~~fv~~h~~~~~v~a~iNLD~~G 263 (862)
.+ .++++|.|+|+.+||.|+.|++.++++. . +..+++++|..+
T Consensus 131 -~~-~~~~~v~~~~~~~EE~g~~Ga~~~~~~~-~--~~d~~~~~d~~~ 173 (487)
T 2qyv_A 131 -ND-IAHPELEVLLTMTEERGMEGAIGLRPNW-L--RSEILINTDTEE 173 (487)
T ss_dssp -SS-SCCSSEEEEEESCTTTTCHHHHTCCSSC-C--CCSEEEECCCCC
T ss_pred -CC-CCCCCEEEEEEeccccCCHHHHHHHHhc-c--CCCEEEEEccCC
Confidence 23 4678999999999999999999988533 2 367778887653
No 51
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=99.01 E-value=2.5e-09 Score=120.05 Aligned_cols=137 Identities=15% Similarity=0.156 Sum_probs=102.7
Q ss_pred HHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEEEeccCCCcccccccccCccccccccceE
Q 002959 86 ELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHI 165 (862)
Q Consensus 86 ~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~lg~~~~~~~~ve~d~~~~~~g~~~~~g~~~~~~~~~Y~~~~NV 165 (862)
.+++.+.+++|.++ |.+.+ .+.++.+||.++|+++|. +++.+ . ....||
T Consensus 31 ~~~~i~~~~~l~~i-ps~s~--~e~~~~~~l~~~l~~~G~------~v~~~----~------------------~~~~nv 79 (404)
T 1ysj_A 31 HTRLINMRRDLHEH-PELSF--QEVETTKKIRRWLEEEQI------EILDV----P------------------QLKTGV 79 (404)
T ss_dssp HHHHHHHHHHHHHS-CCCTT--CCHHHHHHHHHHHHHTTC------EECCC----T------------------TCSSCE
T ss_pred HHHHHHHHHHHHhc-CCCCC--ChHHHHHHHHHHHHHcCC------ceEEe----c------------------cCCceE
Confidence 46788899999996 44443 346789999999999982 23221 0 024699
Q ss_pred EEEEcCCCCCCCCCCeEEEEeecCccCCCC-----------C---CCCChhHHHHHHHHHHHHHhccCCCCccEEEEEeC
Q 002959 166 VLRILPKYASEAGENAILVSSHIDTVSAGE-----------G---AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNT 231 (862)
Q Consensus 166 i~~i~g~~~~~~~~~~Vll~AH~Dsv~~sp-----------G---A~Dd~sgva~~LE~ar~L~~~~~~p~~~I~Flf~~ 231 (862)
+++++|+ .+.+.|++.+|+|+||... | +.+.+.|++++|++++.|++.+.+++++|+|+|..
T Consensus 80 ~a~~~g~----~~~~~i~l~~H~D~vp~~~~~~~Pf~~~~~g~l~g~G~kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~ 155 (404)
T 1ysj_A 80 IAEIKGR----EDGPVIAIRADIDALPIQEQTNLPFASKVDGTMHACGHDFHTASIIGTAMLLNQRRAELKGTVRFIFQP 155 (404)
T ss_dssp EEEEECS----SCCCEEEEEEECCCBSCCCCCCCTTCCSSTTCBCTTSHHHHHHHHHHHHHHHHTCGGGCSSEEEEEEES
T ss_pred EEEEeCC----CCCCEEEEEEecccccCCCCCCCCcccCCCCceEcCcChHHHHHHHHHHHHHHhccccCCceEEEEEec
Confidence 9999874 2347899999999998531 2 12235899999999999998777889999999999
Q ss_pred CcCCCCcchHHHHhcCCccCCccEEEEe
Q 002959 232 GEEEGLNGAHSFVTQHPWSTTIRVAVDL 259 (862)
Q Consensus 232 aEE~gl~GS~~fv~~h~~~~~v~a~iNL 259 (862)
+||. ..|++.++++. ..+++.+++.+
T Consensus 156 ~EE~-~~G~~~~~~~g-~~~~~d~~i~~ 181 (404)
T 1ysj_A 156 AEEI-AAGARKVLEAG-VLNGVSAIFGM 181 (404)
T ss_dssp CTTT-TCHHHHHHHTT-TTTTEEEEEEE
T ss_pred cccc-chhHHHHHhcC-CCcCCCEEEEE
Confidence 9999 79999999643 33345666665
No 52
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=98.99 E-value=6e-09 Score=115.65 Aligned_cols=222 Identities=18% Similarity=0.204 Sum_probs=150.9
Q ss_pred HHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEEEeccCCCcccccccccCccccccccceEEEE
Q 002959 89 AMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLR 168 (862)
Q Consensus 89 A~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~lg~~~~~~~~ve~d~~~~~~g~~~~~g~~~~~~~~~Y~~~~NVi~~ 168 (862)
.++.|++|+++ |.+.|.++ .++++|+.+++++++. ++++| +..|++++
T Consensus 11 ~~~~l~~L~~i-pspSG~E~-~~v~~~l~~~l~~~g~------~~~~D------------------------~~GNvi~~ 58 (354)
T 2vpu_A 11 DWKLMQEIIEA-PGVSGYEH-LGIRDIVVDVLKEVAD------EVKVD------------------------KLGNVIAH 58 (354)
T ss_dssp CHHHHHHHHHS-CCBTTCGG-GTHHHHHHHHHHTTCS------EEEEC------------------------TTCCEEEE
T ss_pred HHHHHHHHHhC-CCCCcccH-HHHHHHHHHHHHHhCC------EEEEc------------------------CCCeEEEE
Confidence 47899999996 77777554 2789999999999972 34442 46689999
Q ss_pred EcCCCCCCCCCCeEEEEeecCccCC--------C----------------------------------------------
Q 002959 169 ILPKYASEAGENAILVSSHIDTVSA--------G---------------------------------------------- 194 (862)
Q Consensus 169 i~g~~~~~~~~~~Vll~AH~Dsv~~--------s---------------------------------------------- 194 (862)
++|+ . +.|+|.||+|+|+. +
T Consensus 59 ~~g~----~--~~v~l~aHmDtVg~mV~~I~~~G~l~~~~iGG~~~~~~~~~~v~i~t~~g~~~Gvi~~~~~H~~~~~~~ 132 (354)
T 2vpu_A 59 FKGS----S--PRIMVAAHMDKIGVMVNHIDKDGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQED 132 (354)
T ss_dssp ECCS----S--SEEEEECCCCBCEEEEEEECTTSCEEEEEESSCCGGGGTTCEEEEEETTEEEEEEECCCCSTTC-----
T ss_pred EcCC----C--CEEEEEecccccceeEEEECCCCEEEEEccCCcccccccCCEEEEEcCCCcEEEEEcCCCccccCcccc
Confidence 8773 2 67999999999862 0
Q ss_pred ------------------------------------------------CCCCCChhHHHHHHHHHHHHHhccCCCCccEE
Q 002959 195 ------------------------------------------------EGAGDCSSCVAVMLELARVMSQWAHEFKNAVI 226 (862)
Q Consensus 195 ------------------------------------------------pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~ 226 (862)
..+-||..||++++|+++.+++ ++.+++
T Consensus 133 ~~~~~~~~~l~iD~g~~s~ee~~~~GI~~Gd~v~~d~~~~~~~~~~i~s~~lDnr~g~~~~l~~l~~l~~----~~~~v~ 208 (354)
T 2vpu_A 133 KGSKIDWDQIVVDVGASSKEEAEEMGFRVGTVGEFAPNFTRLNEHRFATPYLDDRICLYAMIEAARQLGD----HEADIY 208 (354)
T ss_dssp ----CCGGGCCEECSCSSHHHHHHTTCCTTCEEEECCCCEECSSSEEECTTHHHHHHHHHHHHHHHHCCC----CSSEEE
T ss_pred cccCCCcceEEEEecCCCHHHHHhcCCCCCCEEEEeeEEEEeCCceEEEecCccHHHHHHHHHHHHHhhc----CCCeEE
Confidence 3588999999999999998753 679999
Q ss_pred EEEeCCcCCCCcchHHHHhcCCccCCccEEEEeecCcCCCCe------------eEEEeC-C-CHHHHHHHHHHccCCCC
Q 002959 227 FLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIGGRS------------ALFQAG-P-NLWAVENFAAVAKYPSG 292 (862)
Q Consensus 227 Flf~~aEE~gl~GS~~fv~~h~~~~~v~a~iNLD~~G~gG~~------------~lfq~g-~-~~~li~~~~~~a~~p~~ 292 (862)
++|++-||.|+.||+....... -..+|.+|+.-++.+. .+...+ . ++.+.+...++++. .+
T Consensus 209 ~~ft~qEEVG~~ga~~aa~~i~----pd~~i~~Dv~~a~dp~~~~~~~~~lg~Gpv~d~~~~~~~~l~~~l~~~a~~-~g 283 (354)
T 2vpu_A 209 IVGSVQEEVGLRGARVASYAIN----PEVGIAMDVTFAKQPHDKGKIVPELGKGPVMDVGPNINPKLRAFADEVAKK-YE 283 (354)
T ss_dssp EEECSCCTTTSHHHHHHHHHHC----CSEEEEEEEEECCCTTSTTCCCCCTTSCCEEEESTTSCHHHHHHHHHHHHH-TT
T ss_pred EEEECCcccCccchhhhhcccC----CCEEEEecccccCCCCcccccCceECCcceEcCCCCCCHHHHHHHHHHHHH-cC
Confidence 9999999999999886553211 1256777754221100 123323 2 77888777765532 11
Q ss_pred cccccccccCCCCCCCCchHHHhh-hcCCeEEEEeecCCCCCCCCcCCccCCCChhHHHHHHHHHHHHHHHHhc
Q 002959 293 QIIGQDLFASGVFETATDFQVYTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTAS 365 (862)
Q Consensus 293 ~~l~~eif~~g~ips~TD~~~F~~-~~GIPgld~a~~~~~~~YHT~~Dt~d~Id~~sLq~~g~~~l~ll~~La~ 365 (862)
-..-.+... -+++||-..+.. ..|+|.+++..... ..||+. |.++.+.+.+..+.+.++++.+..
T Consensus 284 Ip~q~~~~~---g~gGtDa~~i~~a~~Gipt~~Igvp~~--~~Hs~~---E~~~~~D~~~~~~ll~~~l~~l~~ 349 (354)
T 2vpu_A 284 IPLQVEPSP---RPTGTDANVMQINKEGVATAVLSIPIR--YMHSQV---ELADARDVDNTIKLAKALLEELKP 349 (354)
T ss_dssp CCCEEEECC---SCCSSTHHHHHTSTTCCEEEEEEEEEB--STTSTT---CEEEHHHHHHHHHHHHHHHHHCCC
T ss_pred CCcEEEeCC---CCCccHHHHHHHhcCCCCEEEECcccc--cCcCcc---eEeeHHHHHHHHHHHHHHHHhccH
Confidence 110011111 125899988753 36899998754322 278864 466778888888888888877653
No 53
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=98.89 E-value=5.6e-09 Score=117.10 Aligned_cols=141 Identities=14% Similarity=0.098 Sum_probs=102.7
Q ss_pred HHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEEEeccCCCcccccccccCccccccccceE
Q 002959 86 ELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHI 165 (862)
Q Consensus 86 ~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~lg~~~~~~~~ve~d~~~~~~g~~~~~g~~~~~~~~~Y~~~~NV 165 (862)
.+++.+.+++|.++ |.+ |.++.++.+||.++|+++| ++++.+. . ....|+
T Consensus 15 ~~~~~~~~~~l~~~-pe~--s~~E~~~~~~i~~~l~~~G------~~v~~~~--~-------------------g~~~~v 64 (394)
T 3ram_A 15 KYSYIEISHRIHER-PEL--GNEEIFASRTLIDRLKEHD------FEIETEI--A-------------------GHATGF 64 (394)
T ss_dssp HHHHHHHHHHHHHS-CCC--TTCCHHHHHHHHHHHHHTT------CEEEEEE--T-------------------TEEEEE
T ss_pred HHHHHHHHHHHHhC-CCC--CcchHHHHHHHHHHHHHcC------CeEEeCC--C-------------------CCceEE
Confidence 45678888889885 443 4455689999999999998 3444431 0 035799
Q ss_pred EEEEcCCCCCCCCCCeEEEEeecCccCCC-CCCCCChhHHHHHHHHHHHHHhccCCCCccEEEEEeCCcCCC-CcchH-H
Q 002959 166 VLRILPKYASEAGENAILVSSHIDTVSAG-EGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEG-LNGAH-S 242 (862)
Q Consensus 166 i~~i~g~~~~~~~~~~Vll~AH~Dsv~~s-pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~Flf~~aEE~g-l~GS~-~ 242 (862)
+++++|. .+.+.|++.+|+|+||.- .|-+.|. -.+++|.+++.|++.+.+++++|.|+|..+||.| ..||+ .
T Consensus 65 ia~~~g~----~~g~~i~l~ah~D~vpg~~ha~G~d~-~~a~~l~aa~~L~~~~~~~~g~v~~~f~~~EE~~~~~Ga~~~ 139 (394)
T 3ram_A 65 IATYDSG----LDGPAIGFLAEYDALPGLGHACGHNI-IGTASVLGAIGLKQVIDQIGGKVVVLGCPAEEGGENGSAKAS 139 (394)
T ss_dssp EEEEECS----SSSCEEEEEECCCCCTTTSSTTCHHH-HHHHHHHHHHHHHTTHHHHCSEEEEEECCCTTCCTTCCHHHH
T ss_pred EEEEeCC----CCCCEEEEEEecccCCCcceECCccH-HHHHHHHHHHHHHHhHhhCCceEEEEEECCccCCCCCchHHH
Confidence 9999874 345789999999999831 1222233 3477899999998866678899999999999998 58999 7
Q ss_pred HHhcCCccCCccEEEEeecC
Q 002959 243 FVTQHPWSTTIRVAVDLEAM 262 (862)
Q Consensus 243 fv~~h~~~~~v~a~iNLD~~ 262 (862)
++++ ...+++.+++.++..
T Consensus 140 ~~~~-g~~~~~d~~~~~h~~ 158 (394)
T 3ram_A 140 YVKA-GVIDQIDIALMIHPG 158 (394)
T ss_dssp HHHH-TGGGGCSEEECCEEE
T ss_pred HHHc-CCcccCCEEEEECCc
Confidence 7754 233457788887653
No 54
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=98.70 E-value=1.4e-07 Score=107.36 Aligned_cols=159 Identities=14% Similarity=0.146 Sum_probs=102.0
Q ss_pred HHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEEEeccC----CCc----------c-cccc
Q 002959 86 ELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKS----GAN----------R-VGTG 150 (862)
Q Consensus 86 ~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~lg~~~~~~~~ve~d~~~~~~----g~~----------~-~~g~ 150 (862)
.+++.+..++|.++ |-. +..+.++.+||.++|+++|. +++........ |.. + ..-|
T Consensus 13 ~~~~~~~~~~lh~~-Pe~--~~~E~~t~~~i~~~L~~~G~------~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 83 (445)
T 3io1_A 13 APSMTQWRRDFHLH-AES--GWLEFRTASKVADILDGLGY------QLALGRDVIDADSRMGLPDEETLARAFERAREQG 83 (445)
T ss_dssp HHHHHHHHHHHHHT-CCC--TTCCHHHHHHHHHHHHHTTC------EEEEGGGTSCSTTCCSCCCHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHhC-CCC--CCcHHHHHHHHHHHHHHCCC------eEEecccccccccccccccchhhhhhhhhhcccc
Confidence 45677778888884 443 34446799999999999983 33321000000 000 0 0000
Q ss_pred cccCcccccc--ccceEEEEEcCCCCCCCCCCeEEEEeecCccCCC------------------CCCCC---ChhHHHHH
Q 002959 151 VFKGKTLIYS--DLNHIVLRILPKYASEAGENAILVSSHIDTVSAG------------------EGAGD---CSSCVAVM 207 (862)
Q Consensus 151 ~~~~~~~~Y~--~~~NVi~~i~g~~~~~~~~~~Vll~AH~Dsv~~s------------------pGA~D---d~sgva~~ 207 (862)
......... ...||+++++|. .+.+.|+|.||+|+||.. +|..+ ...++|++
T Consensus 84 -~~~~~~~~~~~~~~~vva~~~~~----~~g~~i~l~ah~Davp~~e~~~~~~~Pf~~~~~s~~~G~~h~cGhd~~~a~~ 158 (445)
T 3io1_A 84 -APERWLPAFEGGFAGVVATLDTG----RPGPTLAFRVDMDALDLNEQHDDSHRPHRDHFASCNAGMMHACGHDGHTAIG 158 (445)
T ss_dssp -CCTTTGGGGTTTCCCEEEEEECS----SCCCEEEEEEECCCCCC-------------------------CTTCTHHHHH
T ss_pred -ccccccccccCCCCEEEEEEeCC----CCCCEEEEEEecCCcCCCCCCCCCcCccccccccCCCCceEecCchHHHHHH
Confidence 000000001 358999999874 345799999999999952 12111 12469999
Q ss_pred HHHHHHHHhccCCCCccEEEEEeCCcCCCCcchHHHHhcCCccCCccEEEEee
Q 002959 208 LELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLE 260 (862)
Q Consensus 208 LE~ar~L~~~~~~p~~~I~Flf~~aEE~gl~GS~~fv~~h~~~~~v~a~iNLD 260 (862)
|.+++.|++.+.+++.+|+|+|..+|| +..|++.++++. ..+++.+++.++
T Consensus 159 l~aa~~L~~~~~~~~g~v~l~f~p~EE-~~~Ga~~~i~~g-~~~~~d~~~~~h 209 (445)
T 3io1_A 159 LGLAHVLKQYAAQLNGVIKLIFQPAEE-GTRGARAMVAAG-VVDDVDYFTAIH 209 (445)
T ss_dssp HHHHHHHHHTGGGCCSEEEEEEESCTT-TTCHHHHHHHTT-TTTTCSEEEEEE
T ss_pred HHHHHHHHhCcCcCCceEEEEEecccc-ccchHHHHHHcC-CccccceeEEEe
Confidence 999999998777899999999999999 668999999642 334677888776
No 55
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=98.70 E-value=1.7e-07 Score=103.43 Aligned_cols=213 Identities=16% Similarity=0.268 Sum_probs=138.6
Q ss_pred HHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEEEeccCCCcccccccccCccccccccceEEEEE
Q 002959 90 MKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRI 169 (862)
Q Consensus 90 ~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~lg~~~~~~~~ve~d~~~~~~g~~~~~g~~~~~~~~~Y~~~~NVi~~i 169 (862)
.+.|++|+++ |.+.|.+ +++++|+.+++++++. +++.| +..||++++
T Consensus 14 ~~~l~~L~~~-pspSG~E--~~v~~~i~~~l~~~~~------e~~~D------------------------~~Gnvi~~~ 60 (343)
T 3isx_A 14 KELIRKLTEA-FGPSGRE--EEVRSIILEELEGHID------GHRID------------------------GLGNLIVWK 60 (343)
T ss_dssp HHHHHHHHHS-CCBTTCC--HHHHHHHHHHHTTTCS------EEEEC------------------------TTCCEEEEE
T ss_pred HHHHHHHHhC-CCCCCch--HHHHHHHHHHHHHhCC------EEEEC------------------------CCCCEEEEE
Confidence 4578899996 7777755 4679999999999972 34443 467899987
Q ss_pred cCCCCCCCCCCeEEEEeecCccCC--------C-----------------------------------------------
Q 002959 170 LPKYASEAGENAILVSSHIDTVSA--------G----------------------------------------------- 194 (862)
Q Consensus 170 ~g~~~~~~~~~~Vll~AH~Dsv~~--------s----------------------------------------------- 194 (862)
|. +.+.|+|.||+|+++. +
T Consensus 61 -g~-----~~~~v~l~aHmDevG~mV~~I~~~G~l~~~~vGG~~~~~~~~~~v~i~t~~~Gvig~~~~H~~~~~~~~~~~ 134 (343)
T 3isx_A 61 -GS-----GEKKVILDAHIDEIGVVVTNVDDKGFLTIEPVGGVSPYMLLGKRIRFENGTIGVVGMEGETTEERQENVRKL 134 (343)
T ss_dssp -CC-----CSSEEEEEEECCBCEEEEEEECTTSCEEEEEESSCCHHHHTTCEEEETTSCEEEEEECCCSHHHHHHHHHTC
T ss_pred -CC-----CCCEEEEEecccccceEEEEECCCCeEEEEecCCcCccccCCcEEEEeccEEEEEecccccccChhhcccCC
Confidence 41 3467999999999862 0
Q ss_pred -----------------------------------------CCCCCChhHHHHHHHHHHHHHhccCCCCccEEEEEeCCc
Q 002959 195 -----------------------------------------EGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGE 233 (862)
Q Consensus 195 -----------------------------------------pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~Flf~~aE 233 (862)
..+-||..||++++|+++.+.. +++++++|+.-|
T Consensus 135 ~~~~l~iD~g~~s~ee~~~~I~vGd~v~~~~~~~~~~~~i~s~~lDdR~g~~~~l~~l~~l~~-----~~~~~~~ft~qE 209 (343)
T 3isx_A 135 SFDKLFIDIGANSREEAQKMCPIGSFGVYDSGFVEVSGKYVSKAMDDRIGCAVIVEVFKRIKP-----AVTLYGVFSVQE 209 (343)
T ss_dssp CGGGEEEECSCSSHHHHHHHSCTTCEEEESCCCEEETTEEEESCHHHHHHHHHHHHHHHHCCC-----SSEEEEEEECCC
T ss_pred CcceEEEEeCCCCHHHHHhcCCCCCEEEecCceEEeccEEEeccCccHHHHHHHHHHHHhccC-----CCeEEEEEECCc
Confidence 3488999999999999998642 689999999999
Q ss_pred CCCCcchHHHHhcCCccCCccEEEEeecCcCCC---------------CeeEEEe-CC--CHHHHHHHHHHccCCCCccc
Q 002959 234 EEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIGG---------------RSALFQA-GP--NLWAVENFAAVAKYPSGQII 295 (862)
Q Consensus 234 E~gl~GS~~fv~~h~~~~~v~a~iNLD~~G~gG---------------~~~lfq~-g~--~~~li~~~~~~a~~p~~~~l 295 (862)
|.|+.|++......+ -..+|.+|+.-++. +.+-... +. ++.+.+...+.++. .+-..
T Consensus 210 EVG~~Ga~~aa~~i~----pd~~i~vDv~~a~d~p~~~~~~~~~lg~GpvI~~~d~~~~~d~~l~~~l~~~A~~-~gIp~ 284 (343)
T 3isx_A 210 EVGLVGASVAGYGVP----ADEAIAIDVTDSADTPKAIKRHAMRLSGGPALKVKDRASISSKRILENLIEIAEK-FDIKY 284 (343)
T ss_dssp CTTSCCSTTTGGGCC----CSEEEEEEEEECCCSTTCCCTTCCCTTSCCEEECBTTCCHHHHHHHHHHHHHHHH-TTCCC
T ss_pred ccCchhHHHHhhcCC----CCEEEEEeCcCCCCCCCcccccccccCCCcEEEEcCCCCCCCHHHHHHHHHHHHH-CCCCe
Confidence 999999976553221 22467777643221 1111111 12 45666666655432 11110
Q ss_pred ccccccCCCCCCCCchHHHhh-hcCCeEEEEeecCCCCCCCCcCCccCCCChhHHHHHHHHHHHHH
Q 002959 296 GQDLFASGVFETATDFQVYTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFL 360 (862)
Q Consensus 296 ~~eif~~g~ips~TD~~~F~~-~~GIPgld~a~~~~~~~YHT~~Dt~d~Id~~sLq~~g~~~l~ll 360 (862)
-.++.. ..+||-..+.. ..|+|..++..--. ..||+. |.++.+.+.+..+.+.+++
T Consensus 285 Q~~v~~----ggGTDa~~i~~a~~Gipt~~Igvp~r--~~Hs~~---E~~~~~Di~~~~~ll~~~l 341 (343)
T 3isx_A 285 QMEVLT----FGGTNAMGYQRTREGIPSATVSIPTR--YVHSPS---EMIAPDDVEATVDLLIRYL 341 (343)
T ss_dssp EECCCB----CCCSSHHHHHHHTSSCCEEEEEEEEB--STTSTT---EEECHHHHHHHHHHHHHHH
T ss_pred EEecCC----CCchHHHHHHHhcCCCCEEEEccccc--cccchh---hEecHHHHHHHHHHHHHHH
Confidence 011221 25899877653 37899998864422 278865 4556666766666665554
No 56
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=98.40 E-value=5.5e-06 Score=87.50 Aligned_cols=222 Identities=18% Similarity=0.204 Sum_probs=131.9
Q ss_pred HHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEEEeccCCCcccccccccCccccccccceEEEEE
Q 002959 90 MKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRI 169 (862)
Q Consensus 90 ~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~lg~~~~~~~~ve~d~~~~~~g~~~~~g~~~~~~~~~Y~~~~NVi~~i 169 (862)
++.|++|+++ |-+.|.++ ..+++||.++|+++|. ++++| +..||++++
T Consensus 12 ~elL~~Lv~i-pS~sg~E~-~~v~~~l~~~l~~~G~------~v~~D------------------------~~GNlia~~ 59 (354)
T 2wzn_A 12 WKLMQEIIEA-PGVSGYEH-LGIRDIVVDVLKEVAD------EVKVD------------------------KLGNVIAHF 59 (354)
T ss_dssp HHHHHHHHHS-CCBTTCGG-GTHHHHHHHHHHTTSS------EEEEC------------------------TTCCEEEEE
T ss_pred HHHHHHHhcC-CCCCcchH-HHHHHHHHHHHHHcCC------EEEEe------------------------CCCeEEEEE
Confidence 4688999997 55555432 3578999999999983 45443 356999999
Q ss_pred cCCCCCCCCCCeEEEEeecCccCCC-------------------------------------------------------
Q 002959 170 LPKYASEAGENAILVSSHIDTVSAG------------------------------------------------------- 194 (862)
Q Consensus 170 ~g~~~~~~~~~~Vll~AH~Dsv~~s------------------------------------------------------- 194 (862)
+|+ .+.|+|++|+|+||..
T Consensus 60 ~g~------~p~lll~~H~Dtvp~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee~~~~~ 133 (354)
T 2wzn_A 60 KGS------SPRIMVAAHMDKIGVMVNHIDKDGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQEDK 133 (354)
T ss_dssp CCS------SSEEEEEEECCBCEEEEEEECTTSCEEEEEESSCCGGGGTTCEEEEEETTEEEEEEECCCCGGGC------
T ss_pred CCC------CceEEEEeccccCCCcCCeeecCCceeeccCCCccHHHHHHHHHHHhhccCCccceEEEeeeeeEeccccc
Confidence 763 3579999999998730
Q ss_pred -----------------------------------------------CCCCCChhHHHHHHHHHHHHHhccCCCCccEEE
Q 002959 195 -----------------------------------------------EGAGDCSSCVAVMLELARVMSQWAHEFKNAVIF 227 (862)
Q Consensus 195 -----------------------------------------------pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~F 227 (862)
.-+.|+..++..++++++.|.. ......+
T Consensus 134 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~ 209 (354)
T 2wzn_A 134 GSKIDWDQIVVDVGASSKEEAEEMGFRVGTVGEFAPNFTRLNEHRFATPYLDDRICLYAMIEAARQLGD----HEADIYI 209 (354)
T ss_dssp ---CCGGGCCEECSCSSHHHHHHTTCCTTCEEEECCCCEECSSSEEECTTHHHHHHHHHHHHHHHHCCC----CSSEEEE
T ss_pred ccchhhhhhhhhhcccchhhhhccccccceeeeeeeeeEeecccccccccccccchhhhHHHHHHHHHh----ccccccc
Confidence 1134556667777777766543 4566778
Q ss_pred EEeCCcCCCCcchHHHHhcCCccCCccEEEEeecCc----------CCCCeeEEEeCC--CHHHHHHHHH---HccCCCC
Q 002959 228 LFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMG----------IGGRSALFQAGP--NLWAVENFAA---VAKYPSG 292 (862)
Q Consensus 228 lf~~aEE~gl~GS~~fv~~h~~~~~v~a~iNLD~~G----------~gG~~~lfq~g~--~~~li~~~~~---~a~~p~~ 292 (862)
.+...++.|..+...-...... ............ ..+.......+. ++........ ....+.
T Consensus 210 ~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 286 (354)
T 2wzn_A 210 VGSVQEEVGLRGARVASYAINP--EVGIAMDVTFAKQPHDKGKIVPELGKGPVMDVGPNINPKLRAFADEVAKKYEIPL- 286 (354)
T ss_dssp EEESCGGGTSHHHHHHHHHHCC--SEEEEEEEEECCCTTSTTCCCCCTTSCCEEEESTTSCHHHHHHHHHHHHHTTCCC-
T ss_pred cccceeeeeeeccccccccccc--ccceeeeeeeccccchhhhhheeeccccccccccccCcchhhhhHHHHHHhcCCC-
Confidence 8888888887655443322111 111111111110 011111111122 3333222211 111111
Q ss_pred cccccccccCCCCCCCCchHHHhh-hcCCeEEEEeecCCCCCCCCcCCccCCCChhHHHHHHHHHHHHHHHHhcCC
Q 002959 293 QIIGQDLFASGVFETATDFQVYTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASST 367 (862)
Q Consensus 293 ~~l~~eif~~g~ips~TD~~~F~~-~~GIPgld~a~~~~~~~YHT~~Dt~d~Id~~sLq~~g~~~l~ll~~La~~~ 367 (862)
..+.. ..+..||-..|.. ..|+|.+.+.-. ..+ .||+. |.++.+.+.+..+.+.+++++|...+
T Consensus 287 ---~~~~~---~~~ggTDa~~~~~~~~Giptv~~G~g-~~~-~Ht~~---E~v~i~dl~~~~~ll~~~i~~L~~~d 351 (354)
T 2wzn_A 287 ---QVEPS---PRPTGTDANVMQINKEGVATAVLSIP-IRY-MHSQV---ELADARDVDNTIKLAKALLEELKPMD 351 (354)
T ss_dssp ---EEEEC---CSCCSSHHHHHHTSTTCCEEEEEEEE-EBS-TTSTT---CEEEHHHHHHHHHHHHHHHHHCCCCC
T ss_pred ---ceEEE---ecccccHHHHHHHhcCCCCEEEECcc-cCC-CCccc---EEEEHHHHHHHHHHHHHHHHhCcccc
Confidence 11222 2346899887753 279999988764 333 69965 67888999999999999999986543
No 57
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=92.58 E-value=0.13 Score=57.75 Aligned_cols=44 Identities=16% Similarity=0.218 Sum_probs=40.9
Q ss_pred CCCCCHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhccc
Q 002959 81 RRGFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKE 125 (862)
Q Consensus 81 ~~~fs~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~lg~ 125 (862)
...++.++++++++.|++ ++|..||++++++++|+.++++++|.
T Consensus 10 ~~~i~~~~~~~~l~~Ls~-~~R~~Gs~g~~~a~~yi~~~~~~~Gl 53 (421)
T 2ek8_A 10 TKRTDAENMYNTIQFLSQ-APRVAGSPEELKAVRYIEQQFKSYGY 53 (421)
T ss_dssp HTTCCHHHHHHHHHHHTT-SCCCTTSHHHHHHHHHHHHHHHHTTC
T ss_pred HhhCCHHHHHHHHHHHhC-CCCCCCCHHHHHHHHHHHHHHHHCCC
Confidence 357999999999999998 59999999999999999999999984
No 58
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=91.91 E-value=0.18 Score=57.23 Aligned_cols=42 Identities=26% Similarity=0.329 Sum_probs=38.5
Q ss_pred CCHHHHHHHHHHHH-ccCCCCCCCHHHHHHHHHHHHHHHhccc
Q 002959 84 FSELEAMKHVKALT-QLGPHAVGSDALDRALQYVLAASQKIKE 125 (862)
Q Consensus 84 fs~erA~~~L~~L~-~igpr~~GS~~n~~a~~yL~~~l~~lg~ 125 (862)
++.++++++|++|+ .+|+|..||++++++.+|+.++|+++|.
T Consensus 18 ~~~~~~~~~l~~l~~~~G~R~~GS~g~~~a~~~i~~~l~~~G~ 60 (444)
T 3iib_A 18 QSSSLGYDIVESLTVEVGPRLAGSEQDKVAVDWAIAKLQSLGF 60 (444)
T ss_dssp HHCCHHHHHHHHHHHHTCCCCTTSHHHHHHHHHHHHHHHHTTC
T ss_pred hcccHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHcCC
Confidence 45578999999999 6999999999999999999999999984
No 59
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=91.01 E-value=0.24 Score=56.03 Aligned_cols=142 Identities=12% Similarity=-0.001 Sum_probs=84.5
Q ss_pred CCCCCCChhHHHHHHHHHHHHHhccCCCCccEEEEEeCCcCCCCcchHHHHhcC-Cc-cCCc-------------cEEEE
Q 002959 194 GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQH-PW-STTI-------------RVAVD 258 (862)
Q Consensus 194 spGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~Flf~~aEE~gl~GS~~fv~~h-~~-~~~v-------------~a~iN 258 (862)
...+-||.+||+++||+++.+. +.+.+++++| +-||.|..|++.-.... +. .+++ ..+|.
T Consensus 230 ~s~~lDdr~~~~~~l~al~~~~----~~~~~v~~~f-d~EEVGs~ga~gA~s~~~~~~l~ri~~~~~~~~~~~~~s~~is 304 (428)
T 2ijz_A 230 AGARLDNLLSCHAGLEALLNAE----GDENCILVCT-DHEEVGSCSHCGADGPFLEQVLRRLLPEGDAFSRAIQRSLLVS 304 (428)
T ss_dssp SCCCSSCSSTTTTTTTHHHHTT----SCSSSCEEEE-CBSCTTTTCHHHHSSCCTTTSCCSSSSSSSSSTTTTTSCCEEE
T ss_pred EeecCccHHHHHHHHHHHHhcc----cCCceEEEEE-eccccCccchhhhhccccHHHHHHhhhhhhHHHhhhhcCEEEE
Confidence 3578899999999999998764 4567888888 99999999998754321 11 0111 67788
Q ss_pred eecCcCC------------------CCeeEEE---eC-CCHHHHHHHHHHc---cCCCCcccccccccCCCCCCCCchHH
Q 002959 259 LEAMGIG------------------GRSALFQ---AG-PNLWAVENFAAVA---KYPSGQIIGQDLFASGVFETATDFQV 313 (862)
Q Consensus 259 LD~~G~g------------------G~~~lfq---~g-~~~~li~~~~~~a---~~p~~~~l~~eif~~g~ips~TD~~~ 313 (862)
.|++-+. |..+-.. .. +++.+...+++.+ .-|+.. ++.+. -.+++||-.+
T Consensus 305 ~Dv~ha~~Pn~~~~~~~~~~~~lg~G~vIk~~~~~~~~~~~~~~~~l~~~a~~~~Ip~Q~----~~~~~-d~~gGsd~g~ 379 (428)
T 2ijz_A 305 ADNAHGVHPNYADRHDANHGPALNGGPVIKINSNQRYATNSETAGFFRHLCQDSEVPVQS----FVTRS-DMGCGSTIGP 379 (428)
T ss_dssp ECCCCCCCSSCGGGCCSSCCCSSSCCCBCCCCSSSCCSCCHHHHTTTTHHHHHTCCCCCB----CCCCS-SCCCCCCCST
T ss_pred EecccccCCCCcccccccCCcccCCCcEEEEECCCCCCCCHHHHHHHHHHHHHcCCCeEE----EEEeC-CCCccchHHH
Confidence 8875542 1111110 11 2454444333322 223221 12211 1346788777
Q ss_pred Hhh-hcCCeEEEEeecCCCCCCCCcCCccCCCChh
Q 002959 314 YTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLLKPG 347 (862)
Q Consensus 314 F~~-~~GIPgld~a~~~~~~~YHT~~Dt~d~Id~~ 347 (862)
+.. ..|||.+|+..-- -.-||+..+...-|..
T Consensus 380 i~~~~~Gi~tvdiGip~--~~mHS~~E~~~~~D~~ 412 (428)
T 2ijz_A 380 ITASQVGVRTVDIGLPT--FAMHSIRELAGSHDLA 412 (428)
T ss_dssp TTGGGGSCCEEEECCCC--CSCSSSSCCCCSSHHH
T ss_pred HHHhCCCCCEEEEchhh--cccchHHHHhhHHHHH
Confidence 753 4899999986432 2369987776655543
No 60
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=90.72 E-value=0.26 Score=56.14 Aligned_cols=42 Identities=19% Similarity=0.192 Sum_probs=36.4
Q ss_pred CCCCChhHHHHHHHHHHHHHhccCCCCccEEEEEeCCcCCCCcchHH
Q 002959 196 GAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHS 242 (862)
Q Consensus 196 GA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~Flf~~aEE~gl~GS~~ 242 (862)
++-||..||.++||+++.+ .++.++++++++-||.|+.|++.
T Consensus 246 ~~lDnr~~~~~~l~al~~~-----~~~~~~~~~~~d~EEVGs~ga~g 287 (450)
T 2glf_A 246 YGQDDRICAYTALRALLSA-----NPEKSIGVIFFDKEEIGSDGNTG 287 (450)
T ss_dssp TTHHHHHHHHHHHHHHHHC-----CCSSCEEEEEESCGGGTSCSSSS
T ss_pred ecchhhHHHHHHHHHHHhc-----CCCceEEEEEEcccccCCcchhh
Confidence 6789999999999998865 35789999999999999887663
No 61
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=83.24 E-value=1.5 Score=52.76 Aligned_cols=43 Identities=12% Similarity=0.115 Sum_probs=40.0
Q ss_pred CCCCHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhccc
Q 002959 82 RGFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKE 125 (862)
Q Consensus 82 ~~fs~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~lg~ 125 (862)
..+++++++++|+.|++ .||..||+++.++++|+.+++++.|.
T Consensus 20 ~~~~~~~i~~~l~~lt~-~ph~aGt~~~~~~a~yi~~~~~~~Gl 62 (707)
T 3fed_A 20 SEMKAENIKSFLRSFTK-LPHLAGTEQNFLLAKKIQTQWKKFGL 62 (707)
T ss_dssp HHCCHHHHHHHHHHHSS-SCCCTTSHHHHHHHHHHHHHHHHHTC
T ss_pred HhCCHHHHHHHHHHHhc-CCCcCCCHhHHHHHHHHHHHHHHcCC
Confidence 46899999999999999 49999999999999999999999984
No 62
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=81.19 E-value=2.3 Score=48.88 Aligned_cols=160 Identities=11% Similarity=-0.011 Sum_probs=85.0
Q ss_pred CCCCCChhHHHHHHHHHHHHHhcc---CCCCccEEEEEeCCcCCCCcchHHHHhcC-Cc-----------------cCCc
Q 002959 195 EGAGDCSSCVAVMLELARVMSQWA---HEFKNAVIFLFNTGEEEGLNGAHSFVTQH-PW-----------------STTI 253 (862)
Q Consensus 195 pGA~Dd~sgva~~LE~ar~L~~~~---~~p~~~I~Flf~~aEE~gl~GS~~fv~~h-~~-----------------~~~v 253 (862)
.++-||..||.+++|+++.+.+.. .......++++++-||.|+.|++.-.... |. +-.-
T Consensus 281 s~~lDnr~~~~~~leaL~~~~~~~~~~~~~~~~~v~v~~dqEEVGs~ga~gA~s~~~pdvl~ri~~~~~~~~~~~~~l~~ 360 (496)
T 3vat_A 281 APRLDNLHSCFCALQALIDSCSAPASLAADPHVRMIALYDNEEVGSESAQGAQSLLTELVLRRISASPQHLTAFEEAIPK 360 (496)
T ss_dssp ETTHHHHHHHHHHHHHHHHHTTSHHHHHHCCSEEEEEEESCGGGTSCSSSSTTSTHHHHHHHHHHCCSSCTTHHHHHGGG
T ss_pred eeccccHHHHHHHHHHHHhhhccccccccCCCcEEEEEEccCCcCCCcchhccccccHHHHHHHHhccCchHHHHHHhhc
Confidence 368899999999999998875310 01123444999999999987665422100 00 0112
Q ss_pred cEEEEeecCcC------------------CCCeeEEEe----CCCHHHHHHHHHHc---cCCCCcccccccccCCCCC-C
Q 002959 254 RVAVDLEAMGI------------------GGRSALFQA----GPNLWAVENFAAVA---KYPSGQIIGQDLFASGVFE-T 307 (862)
Q Consensus 254 ~a~iNLD~~G~------------------gG~~~lfq~----g~~~~li~~~~~~a---~~p~~~~l~~eif~~g~ip-s 307 (862)
..+|..|++-+ +|..+-+.. .+++.+...+++.+ .-|+-.. +-+. -.+ +
T Consensus 361 S~~IS~DvahA~dPn~~~~~~~~~~~~LG~GpvIK~~~~~~y~t~~~~~~~l~~ia~~~~Ip~Q~~----v~r~-D~~gG 435 (496)
T 3vat_A 361 SYMISADMAHAVHPNYLDKHEENHRPLFHKGPVIKVNSKQRYASNAVSEALIREVASSVGVPLQDL----MVRN-DSPCG 435 (496)
T ss_dssp CEEEEECCEECCBTTBGGGSCTTCCCCTTSCCEEECCTTTTSCCCHHHHHHHHHHHHHHTCCCEEE----CCCT-TSCCC
T ss_pred CeEEEEeCCCCCCCCCcccccccCCcccCcCCEEEEcCCCCcccCHHHHHHHHHHHHHcCCCEEEE----EecC-CCCCc
Confidence 36777776422 122211111 13555555554433 2333211 1111 123 3
Q ss_pred CCchHHHhhhcCCeEEEEeecCCCCCCCCcCCccCCCChhHHHHHHHHHHHHHHHHh
Q 002959 308 ATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTA 364 (862)
Q Consensus 308 ~TD~~~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d~Id~~sLq~~g~~~l~ll~~La 364 (862)
+|+-.+.....|||.+++..--- .-||+.-+...-|.. ++.+.+.+++..+.
T Consensus 436 gTig~i~~s~~Gi~tvdIGiP~r--yMHS~~E~~~~~D~~---~~v~Ll~af~~~~~ 487 (496)
T 3vat_A 436 TTIGPILASRLGLRVLDLGSPQL--AMHSIRETACTTGVL---QTITLFKGFFELFP 487 (496)
T ss_dssp CCHHHHHHHHHTCEEEEEECEEE--STTSSSEEEESHHHH---HHHHHHHHHHHHHH
T ss_pred chHHHHHhcccCCcEEEecHhhh--ccccHHHHhhHHHHH---HHHHHHHHHHHhHH
Confidence 45554444348999999864322 259988777655544 44444555555443
No 63
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=78.23 E-value=0.64 Score=53.08 Aligned_cols=45 Identities=24% Similarity=0.227 Sum_probs=38.0
Q ss_pred CCCCCChhHHHHHHHHHHHHHhccCCCCccEEEEEeCCcCCCCcchHHH
Q 002959 195 EGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSF 243 (862)
Q Consensus 195 pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~Flf~~aEE~gl~GS~~f 243 (862)
.++-||..||.++||+++.+. .+++++++++++-||.|..|++.-
T Consensus 257 s~~lDdr~~~~~~l~al~~~~----~~~~~~~~~~~d~EEVGs~ga~ga 301 (461)
T 2glj_A 257 GYGQDDRICAYTSFEAMLEMK----NAKKTCITILVDKEEVGSIGATGM 301 (461)
T ss_dssp ETTHHHHHHHHHHHHHHHTCC----SCSSCEEEEEECCGGGTCCTTTTS
T ss_pred EecchhHHHHHHHHHHHHhhc----cCCCeEEEEEEccCCCCCcccccc
Confidence 357899999999999988653 467899999999999999887643
No 64
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=76.63 E-value=0.8 Score=54.40 Aligned_cols=44 Identities=20% Similarity=0.243 Sum_probs=39.2
Q ss_pred CCCHHHHHHHHHHHHc--cCCCCCCCHHHHHHHHHHHHHHHhcccc
Q 002959 83 GFSELEAMKHVKALTQ--LGPHAVGSDALDRALQYVLAASQKIKES 126 (862)
Q Consensus 83 ~fs~erA~~~L~~L~~--igpr~~GS~~n~~a~~yL~~~l~~lg~~ 126 (862)
.++++++++||+.|++ +++|..||++++++++||.++++++|.+
T Consensus 14 ~i~~~~i~~~L~~Lssd~~~~R~aGT~g~~~aa~yI~~~f~~~Gl~ 59 (640)
T 3kas_A 14 KLDSTDFTSTIKLLNENSYVPREAGSQKDENLALYVENQFREFKLS 59 (640)
T ss_dssp HHHTCCHHHHHHHTTSTTTSSCCTTSHHHHHHHHHHHHHHHHHTCS
T ss_pred hCCHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHHHHcCCc
Confidence 3566789999999998 5899999999999999999999999853
No 65
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=75.44 E-value=0.45 Score=54.32 Aligned_cols=45 Identities=22% Similarity=0.234 Sum_probs=32.1
Q ss_pred CCCCChhHHHHHHHHHHHHHhccCCCCccEEEEEeCCcCCCCcchHHH
Q 002959 196 GAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSF 243 (862)
Q Consensus 196 GA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~Flf~~aEE~gl~GS~~f 243 (862)
++-||..||+++||+++.+.+ .++++++++|++-||.|..|++.-
T Consensus 252 ~~lDdr~~~~~~l~al~~~~~---~~~~~~~~~~~d~EEVGs~ga~ga 296 (458)
T 1y7e_A 252 YGQDDKICVFTSLESIFDLEE---TPNKTAICFLVDKEEIGSTGSTGL 296 (458)
T ss_dssp SSHHHHHHHHHHHHHHSSSSC---CCSSCEECCCBCSTTC--------
T ss_pred ecCccHHHHHHHHHHHHhhhc---cCCceEEEEEEcccccCcccchhh
Confidence 578999999999999886532 577899999999999999888754
No 66
>1q7l_B Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=35.93 E-value=65 Score=27.27 Aligned_cols=59 Identities=17% Similarity=0.224 Sum_probs=46.1
Q ss_pred CCCCCchHHHhhhcCCeEEEEeecCC-CCCCCCcCCccCCCChhHHHHHHHHHHHHHHHHhcCC
Q 002959 305 FETATDFQVYTEVAGLSGLDFAYTDK-SAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASST 367 (862)
Q Consensus 305 ips~TD~~~F~~~~GIPgld~a~~~~-~~~YHT~~Dt~d~Id~~sLq~~g~~~l~ll~~La~~~ 367 (862)
.++.||-+.|+. .|+|.+.+.-... ...-|+.. |+|+.+.+.+..+....+++.+.+.+
T Consensus 23 ~~g~TDar~~~~-~gip~v~fGPg~~~~~~~H~~d---E~v~i~~l~~~~~iy~~~i~~~~~~~ 82 (88)
T 1q7l_B 23 MPAAGDNRYIRA-VGVPALGFSPMNRTPVLLHDHD---ERLHEAVFLRGVDIYTRLLPALASVP 82 (88)
T ss_dssp CCSCSHHHHHHH-TTCCEEEECCCCSCCCCTTSTT---CEEEHHHHHHHHHHHHHHHHHHHTCC
T ss_pred eceeCcHHHHHH-cCCCEEEECCCCCCcccccCCC---CeeEHHHHHHHHHHHHHHHHHHHcCC
Confidence 467899999998 7999988765432 13467753 47788999999999999999998763
No 67
>2lx0_A Membrane fusion protein P14; membrane fusion protein transmembrane domain, P14 fast prote ARCH, micelle-peptide complex, membrane protein; NMR {Synthetic}
Probab=31.57 E-value=41 Score=23.18 Aligned_cols=19 Identities=21% Similarity=0.433 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 002959 570 VIFAVVIAVVSCLTLVYLL 588 (862)
Q Consensus 570 ~~ia~~~a~~~~l~~~~l~ 588 (862)
-+||.++|+.|.++++|-+
T Consensus 7 eviaglvalltflafgfwl 25 (32)
T 2lx0_A 7 EVIAGLVALLTFLAFGFWL 25 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 5789999999999999853
No 68
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=27.05 E-value=26 Score=39.38 Aligned_cols=74 Identities=15% Similarity=0.114 Sum_probs=41.4
Q ss_pred CCCHHHHHHHHHHHHHHHhcccccCCcceEEEEEEeccCCCcccccccccCccccccccceEEEEEcCCCCCCCCCCeEE
Q 002959 104 VGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRILPKYASEAGENAIL 183 (862)
Q Consensus 104 ~GS~~n~~a~~yL~~~l~~lg~~~~~~~~ve~d~~~~~~g~~~~~g~~~~~~~~~Y~~~~NVi~~i~g~~~~~~~~~~Vl 183 (862)
..|+..-.+++++.++|++.|.+.-.+ .+.+....| +.++ .-....||++...|+.- ...++.++
T Consensus 13 ~~~~t~~h~v~~~~~~l~~~Gf~~l~e----~~~w~l~~g-----~k~~-----~~~~~g~lia~~~G~~~-~~~~~~~i 77 (428)
T 2ijz_A 13 KASPTPFHATASLARRLEAAGYRRLDE----RDAWHTETG-----GRYY-----VTRNDSSLIAIRLGRRS-PLESGFRL 77 (428)
T ss_dssp TTTHHHHHHHCCSHHHHHHHHHHHSCC------------C-----CCCE-----ECTTTTCCEEEECC--C-CSTTCCEE
T ss_pred HcCCCHHHHHHHHHHHHHHcCCeEccc----ccccccCCC-----CEEE-----EECCCCEEEEEEECCcC-CCCCCcEE
Confidence 356777789999999999988532111 111111111 0111 11134799998877520 12346899
Q ss_pred EEeecCccC
Q 002959 184 VSSHIDTVS 192 (862)
Q Consensus 184 l~AH~Dsv~ 192 (862)
++||.|+..
T Consensus 78 i~AH~Dspg 86 (428)
T 2ijz_A 78 VGAHTDSPC 86 (428)
T ss_dssp EECBCCCSE
T ss_pred EEEcCCcCC
Confidence 999999974
No 69
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=26.79 E-value=1.3e+02 Score=33.93 Aligned_cols=66 Identities=11% Similarity=-0.034 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHhcccccCCcceEEEEEEeccCCCcccccccccCccccccccceEEEEEcCCCCCCCCCCeEEEEee
Q 002959 108 ALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRILPKYASEAGENAILVSSH 187 (862)
Q Consensus 108 ~n~~a~~yL~~~l~~lg~~~~~~~~ve~d~~~~~~g~~~~~g~~~~~~~~~Y~~~~NVi~~i~g~~~~~~~~~~Vll~AH 187 (862)
..-.+++++.++|++.|.+.-.+. +. ...| +.+| .-.+..||++...|+ ...+..++++||
T Consensus 32 t~~h~v~~~~~~l~~~Gf~~l~e~----~~--l~~g-----~k~~-----~~r~~~~lia~~~g~---~~~~g~~ii~AH 92 (450)
T 2glf_A 32 TERMTVKEIKRILDESGFVPLEDF----AG--DPMN-----MTVY-----AVNRGKAIAAFRVVD---DLKRGLNLVVAH 92 (450)
T ss_dssp SHHHHHHHHHHHHHTTTCEETTSC----CS--CTTS-----BCEE-----EESSSSCEEEEEBCS---CGGGCCEEEEEE
T ss_pred CHHHHHHHHHHHHHHCcCEEcccc----cC--CCCC-----CEEE-----EEcCCCEEEEEEeCC---CCCCCeEEEEEe
Confidence 335689999999999985321111 00 0111 1111 111347999987774 123468999999
Q ss_pred cCccC
Q 002959 188 IDTVS 192 (862)
Q Consensus 188 ~Dsv~ 192 (862)
.|+..
T Consensus 93 ~Dsp~ 97 (450)
T 2glf_A 93 IDSPR 97 (450)
T ss_dssp CCCCE
T ss_pred cccCC
Confidence 99964
Done!