Your job contains 1 sequence.
>002961
MACNFSFPSSLSLDIFPTKPKSKNPKNTQKFQFCTPFSCKNQNFNPQNEDRNKNQNSKRP
HLGLLTIPVTLTIISTSLAQKPAFAATKVASGKKKKSQKKTQEALTPEQLKKWSKDLPIV
SDRIAYTEIFSLKDEGKLKHVIKSPSGSLRQKAEPVLVVLEDSRVLRTVLPSLDSNRKFW
ESWDELKIDSLCVNAYTPPLKKPEVPNPYLGFLWRVPASMLSTFRPKKESKRAAEIRRAR
EELKRQRKEELEKMREESEMMEKAMDMQKKEEERRRKKEIRLQKYEESLQDARDNYRYMA
NVWENLAKDSTVATGLGIVFFVIFYRTVVLNYRRQKKDYEDRLKIEKAEREERKKLRQLE
RELEGLEGADDEIEQGEAEQNPHLKMAMQFMKSGARVRRAYGKGLPQYLERGVDVKFSDM
YRRRGVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSL
YQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIAS
TNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGM
VGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQVAINEAA
MAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPR
AADELWCGEGQLSTIWAETADNARSAARTFVLGGLSDKHFGLSNFWVADRINEIDTEALR
ILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLVELHGSLEPMPPSIVDIRA
AKHSEIQEIMTNQNVTSIGSNA
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 002961
(862 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2094892 - symbol:EMB2083 "embryo defective 208... 1870 3.2e-290 3
TAIR|locus:2157637 - symbol:VAR1 "VARIEGATED 1" species:3... 646 1.3e-72 3
UNIPROTKB|Q3AFJ8 - symbol:ftsH "ATP-dependent zinc metall... 714 1.4e-72 2
TIGR_CMR|CHY_0214 - symbol:CHY_0214 "cell division protei... 714 1.4e-72 2
TIGR_CMR|BA_0064 - symbol:BA_0064 "cell division protein ... 723 1.8e-71 1
UNIPROTKB|P37476 - symbol:ftsH "ATP-dependent zinc metall... 691 4.4e-68 1
TIGR_CMR|GSU_1809 - symbol:GSU_1809 "cell division protei... 687 1.2e-67 1
UNIPROTKB|P0C5C0 - symbol:ftsH "ATP-dependent zinc metall... 663 4.2e-67 2
UNIPROTKB|Q5LNU8 - symbol:ftsH "ATP-dependent zinc metall... 655 2.3e-66 2
TIGR_CMR|SPO_3105 - symbol:SPO_3105 "ATP-dependent metall... 655 2.3e-66 2
UNIPROTKB|Q2GIT4 - symbol:ftsH "ATP-dependent zinc metall... 665 2.5e-65 1
TIGR_CMR|APH_1179 - symbol:APH_1179 "ATP-dependent metall... 665 2.5e-65 1
TAIR|locus:2011952 - symbol:FTSH1 "FTSH protease 1" speci... 633 8.7e-65 2
UNIPROTKB|Q2GFA1 - symbol:ftsH "ATP-dependent zinc metall... 655 2.9e-64 1
TIGR_CMR|ECH_1098 - symbol:ECH_1098 "ATP-dependent metall... 655 2.9e-64 1
UNIPROTKB|Q55700 - symbol:ftsH2 "ATP-dependent zinc metal... 652 6.0e-64 1
TIGR_CMR|NSE_0423 - symbol:NSE_0423 "ATP-dependent metall... 644 4.2e-63 1
TIGR_CMR|CBU_1352 - symbol:CBU_1352 "ATP-dependent metall... 642 6.9e-63 1
TAIR|locus:2009235 - symbol:FTSH8 "FTSH protease 8" speci... 617 1.8e-62 2
TAIR|locus:2052806 - symbol:VAR2 "VARIEGATED 2" species:3... 617 1.8e-62 2
TIGR_CMR|SO_1197 - symbol:SO_1197 "ATP-dependent metallop... 637 2.3e-62 1
TIGR_CMR|DET_0391 - symbol:DET_0391 "ATP-dependent metall... 636 3.0e-62 1
TIGR_CMR|CPS_3452 - symbol:CPS_3452 "ATP-dependent metall... 635 3.8e-62 1
CGD|CAL0004443 - symbol:orf19.2057 species:5476 "Candida ... 586 4.4e-61 3
UNIPROTKB|Q9KU86 - symbol:ftsH "ATP-dependent zinc metall... 624 5.5e-61 1
TIGR_CMR|VC_0637 - symbol:VC_0637 "cell division protein ... 624 5.5e-61 1
TAIR|locus:2163736 - symbol:FTSH11 "FTSH protease 11" spe... 622 9.0e-61 1
UNIPROTKB|P0AAI3 - symbol:ftsH species:83333 "Escherichia... 619 1.9e-60 1
TIGR_CMR|GSU_1180 - symbol:GSU_1180 "cell division protei... 609 2.2e-59 1
TAIR|locus:2057386 - symbol:ftsh4 "FTSH protease 4" speci... 577 8.8e-59 2
TAIR|locus:2075581 - symbol:ftsh7 "FTSH protease 7" speci... 563 2.7e-57 2
TIGR_CMR|CJE_1259 - symbol:CJE_1259 "cell division protei... 589 2.8e-57 1
TAIR|locus:2154568 - symbol:ftsh9 "FTSH protease 9" speci... 563 5.3e-57 2
DICTYBASE|DDB_G0284249 - symbol:DDB_G0284249 "peptidase M... 559 8.8e-57 2
POMBASE|SPBC543.09 - symbol:yta12 "mitochondrial m-AAA pr... 577 5.3e-56 1
SGD|S000004695 - symbol:YTA12 "Component of the mitochond... 568 7.9e-55 1
POMBASE|SPCC965.04c - symbol:SPCC965.04c "mitochondrial i... 544 1.4e-54 2
ASPGD|ASPL0000072959 - symbol:AN4557 species:162425 "Emer... 568 1.6e-54 1
DICTYBASE|DDB_G0272120 - symbol:rcaA "peptidase M41, FtsH... 564 3.0e-54 1
ASPGD|ASPL0000029469 - symbol:AN5588 species:162425 "Emer... 560 3.4e-54 1
TAIR|locus:2025052 - symbol:ftsh10 "FTSH protease 10" spe... 541 7.9e-54 2
ZFIN|ZDB-GENE-070912-46 - symbol:afg3l2 "AFG3 ATPase fami... 556 1.2e-53 1
UNIPROTKB|F1N9N5 - symbol:AFG3L2 "Uncharacterized protein... 554 1.5e-53 1
UNIPROTKB|E1BZ74 - symbol:AFG3L2 "Uncharacterized protein... 554 2.4e-53 1
CGD|CAL0002950 - symbol:YME1 species:5476 "Candida albica... 551 3.0e-53 1
SGD|S000000819 - symbol:AFG3 "Component, with Yta12p, of ... 549 4.9e-53 1
UNIPROTKB|Q9Y4W6 - symbol:AFG3L2 "AFG3-like protein 2" sp... 548 1.0e-52 1
UNIPROTKB|E2QYF3 - symbol:AFG3L2 "Uncharacterized protein... 548 1.2e-52 1
UNIPROTKB|F1LN92 - symbol:Afg3l2 "Protein Afg3l2" species... 547 1.4e-52 1
UNIPROTKB|Q2KJI7 - symbol:AFG3L2 "AFG3-like protein 2" sp... 547 1.5e-52 1
FB|FBgn0036702 - symbol:CG6512 species:7227 "Drosophila m... 548 1.6e-52 1
TAIR|locus:2066128 - symbol:ftsh3 "FTSH protease 3" speci... 547 1.6e-52 1
DICTYBASE|DDB_G0267492 - symbol:DDB_G0267492 "peptidase M... 528 2.5e-52 2
DICTYBASE|DDB_G0293388 - symbol:DDB_G0293388 "ATP-depende... 542 2.7e-52 1
TAIR|locus:2076929 - symbol:AT3G02450 species:3702 "Arabi... 521 2.9e-52 2
MGI|MGI:1916847 - symbol:Afg3l2 "AFG3(ATPase family gene ... 544 3.2e-52 1
GENEDB_PFALCIPARUM|PFL1925w - symbol:PFL1925w "cell divis... 547 3.3e-52 1
UNIPROTKB|Q8I526 - symbol:PFL1925w "Cell division protein... 547 3.3e-52 1
UNIPROTKB|F1NTK8 - symbol:YME1L1 "Uncharacterized protein... 540 4.4e-52 1
UNIPROTKB|F1P519 - symbol:YME1L1 "Uncharacterized protein... 540 4.4e-52 1
RGD|1309722 - symbol:Afg3l1 "AFG3(ATPase family gene 3)-l... 535 4.9e-52 2
ZFIN|ZDB-GENE-070410-25 - symbol:yme1l1b "YME1-like 1b" s... 535 1.5e-51 1
MGI|MGI:1351651 - symbol:Yme1l1 "YME1-like 1 (S. cerevisi... 534 1.9e-51 1
UNIPROTKB|G3V886 - symbol:Yme1l1 "YME1-like 1 (S. cerevis... 534 1.9e-51 1
GENEDB_PFALCIPARUM|PF14_0616 - symbol:PF14_0616 "i-AAA pr... 533 2.4e-51 1
UNIPROTKB|Q8IKI9 - symbol:PF14_0616 "ATP-dependent protea... 533 2.4e-51 1
UNIPROTKB|A6QR12 - symbol:YME1L1 "Uncharacterized protein... 532 3.1e-51 1
MGI|MGI:1928277 - symbol:Afg3l1 "AFG3(ATPase family gene ... 534 3.8e-51 2
UNIPROTKB|E1BFQ0 - symbol:E1BFQ0 "Uncharacterized protein... 537 8.2e-51 1
UNIPROTKB|F1PRV6 - symbol:YME1L1 "Uncharacterized protein... 534 1.1e-50 1
UNIPROTKB|F1RVK1 - symbol:YME1L1 "Uncharacterized protein... 534 2.0e-50 1
UNIPROTKB|Q96TA2 - symbol:YME1L1 "ATP-dependent zinc meta... 534 2.2e-50 1
UNIPROTKB|I3LLQ8 - symbol:AFG3L2 "Uncharacterized protein... 522 3.6e-50 1
WB|WBGene00004978 - symbol:spg-7 species:6239 "Caenorhabd... 532 5.6e-50 1
WB|WBGene00010842 - symbol:ymel-1 species:6239 "Caenorhab... 521 5.5e-49 1
CGD|CAL0000075 - symbol:AFG3 species:5476 "Candida albica... 438 6.5e-49 3
UNIPROTKB|Q5AJC2 - symbol:AFG3 "Putative uncharacterized ... 438 6.5e-49 3
RGD|620764 - symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" ... 519 6.9e-49 1
ZFIN|ZDB-GENE-091113-41 - symbol:yme1l1a "YME1-like 1a" s... 519 1.6e-48 1
UNIPROTKB|J9NRR9 - symbol:YME1L1 "Uncharacterized protein... 505 2.9e-47 1
SGD|S000006228 - symbol:YME1 "Catalytic subunit of the mi... 508 8.1e-47 1
UNIPROTKB|F1NXP0 - symbol:SPG7 "Uncharacterized protein" ... 496 3.4e-45 1
TAIR|locus:2174819 - symbol:EMB3144 "EMBRYO DEFECTIVE 314... 496 6.5e-45 1
UNIPROTKB|Q9UQ90 - symbol:SPG7 "Paraplegin" species:9606 ... 493 1.0e-44 1
ZFIN|ZDB-GENE-030131-5391 - symbol:spg7 "spastic parapleg... 490 2.2e-44 1
TAIR|locus:2138146 - symbol:FtsHi1 "FTSH inactive proteas... 496 3.4e-44 2
UNIPROTKB|Q58576 - symbol:pan "Proteasome-activating nucl... 468 5.5e-44 1
UNIPROTKB|A7E2Z6 - symbol:SPG7 "SPG7 protein" species:991... 486 6.1e-44 1
UNIPROTKB|E2R4F3 - symbol:SPG7 "Uncharacterized protein" ... 485 8.9e-44 1
MGI|MGI:2385906 - symbol:Spg7 "spastic paraplegia 7 homol... 484 1.1e-43 1
FB|FBgn0024992 - symbol:CG2658 species:7227 "Drosophila m... 471 4.5e-42 1
TIGR_CMR|CJE_1085 - symbol:CJE_1085 "cell division protei... 441 5.5e-41 1
FB|FBgn0034792 - symbol:CG3499 species:7227 "Drosophila m... 461 6.9e-41 2
WB|WBGene00021425 - symbol:ppgn-1 species:6239 "Caenorhab... 452 4.5e-40 1
SGD|S000005785 - symbol:RPT4 "ATPase of the 19S regulator... 410 1.1e-39 2
POMBASE|SPCC1682.16 - symbol:rpt4 "19S proteasome regulat... 425 3.2e-39 1
GENEDB_PFALCIPARUM|PF13_0033 - symbol:PF13_0033 "26S prot... 423 5.2e-39 1
UNIPROTKB|Q8IEQ1 - symbol:PF13_0033 "26S proteasome regul... 423 5.2e-39 1
ASPGD|ASPL0000032311 - symbol:AN5747 species:162425 "Emer... 414 5.1e-38 1
CGD|CAL0005827 - symbol:RPT4 species:5476 "Candida albica... 389 6.2e-37 2
WARNING: Descriptions of 545 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2094892 [details] [associations]
symbol:EMB2083 "embryo defective 2083" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0000023 "maltose metabolic process"
evidence=RCA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA] [GO:0019252 "starch
biosynthetic process" evidence=RCA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 Pfam:PF01434
SMART:SM00382 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AB023046
eggNOG:COG0465 GO:GO:0017111 IPI:IPI00526963 RefSeq:NP_566541.1
UniGene:At.38918 ProteinModelPortal:A8MPR5 SMR:A8MPR5 STRING:A8MPR5
PaxDb:A8MPR5 PRIDE:A8MPR5 EnsemblPlants:AT3G16290.1 GeneID:820876
KEGG:ath:AT3G16290 TAIR:At3g16290 HOGENOM:HOG000015086
InParanoid:A8MPR5 OMA:FFTHGEM PhylomeDB:A8MPR5
ProtClustDB:CLSN2688442 Genevestigator:A8MPR5 Uniprot:A8MPR5
Length = 876
Score = 1870 (663.3 bits), Expect = 3.2e-290, Sum P(3) = 3.2e-290
Identities = 376/477 (78%), Positives = 419/477 (87%)
Query: 385 KMAMQFMKSGARVRRAYGKGLPQY-LERGVDVKF---SDMYRRRGVRXXXXXXXXXXXXX 440
K ++++ G V+ GL + LE VKF +MYRRRGV+
Sbjct: 395 KRLPEYLERGVDVKFTDVAGLGKIRLELEEIVKFFTHGEMYRRRGVKIPGGILLCGPPGV 454
Query: 441 XKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAV 500
KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVR+LYQEA++NAPSVVFIDELDAV
Sbjct: 455 GKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRALYQEARENAPSVVFIDELDAV 514
Query: 501 GRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRK 560
GRERGLIKGSGGQERDATLNQLLV LDGFEGRG VITIASTNRPDILDPALVRPGRFDRK
Sbjct: 515 GRERGLIKGSGGQERDATLNQLLVSLDGFEGRGEVITIASTNRPDILDPALVRPGRFDRK 574
Query: 561 IFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG 620
IFIPKPGLIGRMEIL+VHARKKPMA+D+DY+AVASMTDGMVGAELANIVE+AAINMMRDG
Sbjct: 575 IFIPKPGLIGRMEILQVHARKKPMAEDLDYMAVASMTDGMVGAELANIVEIAAINMMRDG 634
Query: 621 RTEITTDDLLQAAQIEERGMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIA 680
RTE+TTDDLLQAAQIEERGMLDRK+RS ETWRQVAINEAAMAVVAVNFPD+KNIEF+TI
Sbjct: 635 RTELTTDDLLQAAQIEERGMLDRKDRSLETWRQVAINEAAMAVVAVNFPDMKNIEFLTIN 694
Query: 681 PRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETA 740
PRAGRELGYVR+KMDH+KFKEGMLSRQS+LDHITVQLAPRAADELW GE QLSTIWAET+
Sbjct: 695 PRAGRELGYVRVKMDHIKFKEGMLSRQSILDHITVQLAPRAADELWYGEDQLSTIWAETS 754
Query: 741 DNARSAARTFVLGGLSDKHFGLSNFWVADRINEIDTEALRILNLCYERAKEILQRNRNLL 800
DNARSAAR+ VLGGLSDKH GL+NFWVADRIN+ID EALRILN+CYERAKEIL RNR L+
Sbjct: 755 DNARSAARSLVLGGLSDKHHGLNNFWVADRINDIDVEALRILNMCYERAKEILGRNRTLM 814
Query: 801 DAVVNELVEKKSLTKQEFFHLVELHGSLEPMPPSIVDIRAAKHSEIQEIMTNQNVTS 857
D VV +LV+KKSLTKQEFF LVEL+GS +PMPPSI+++R K E++E++ ++T+
Sbjct: 815 DEVVEKLVQKKSLTKQEFFTLVELYGSSKPMPPSILELRKIKRLELEEMVLKLDMTT 871
Score = 586 (211.3 bits), Expect = 3.2e-290, Sum P(3) = 3.2e-290
Identities = 120/190 (63%), Positives = 141/190 (74%)
Query: 38 SCKNQNF-NPQNEDRNKNQNSKRPHLGLLTIPVTLTIISTSLAQKPAFAXXXXXXXXXXX 96
SC+N + N +ED + N +K + LL IP+TLTIIS SLA KP+FA
Sbjct: 32 SCQNNSATNVVHEDGDDNDKAKTNQVNLLAIPITLTIISASLA-KPSFAAAKVTERKRTQ 90
Query: 97 XXXXXXEALTPEQLKKWSKDLPIVSDRIAYTEIFSLKDEGKLKHVIKSPSGSLRQKAEPV 156
EALT EQLK WSKDLP+VS+RI YT+I SLK EGKLKHVIK P+ SLRQKAEPV
Sbjct: 91 KKPQ--EALTLEQLKAWSKDLPVVSNRIPYTDILSLKAEGKLKHVIKPPNLSLRQKAEPV 148
Query: 157 LVVLEDSRVLRTVLPSLDSNRKFWESWDELKIDSLCVNAYTPPLKKPEVPNPYLGFLWRV 216
LVVLEDSRVLRTVLPSL+ N++FWE WDEL ID CVNAYTPP+K+P VP+PYLGFLW+V
Sbjct: 149 LVVLEDSRVLRTVLPSLEGNKRFWEQWDELGIDVQCVNAYTPPVKRPPVPSPYLGFLWKV 208
Query: 217 PASMLSTFRP 226
PA ML+ +P
Sbjct: 209 PAYMLTWVKP 218
Score = 373 (136.4 bits), Expect = 3.2e-290, Sum P(3) = 3.2e-290
Identities = 76/138 (55%), Positives = 91/138 (65%)
Query: 283 QKYEESLQDARDNYRYMANVWENLAKDSTVATGLGIVFFVIFYRTVVLNYRRQKKDYEDX 342
+KYEESL++AR NYR MA++W LA+D VAT LG+VFF IFYR VVLNYR+QKKDYED
Sbjct: 275 KKYEESLREARKNYRDMADMWARLAQDPNVATALGLVFFYIFYRVVVLNYRKQKKDYEDR 334
Query: 343 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGEAEQNPHLKMAMQFMKSGARVRRAYG 402
+G E+NP+L+MAMQFMKSGARVRRA
Sbjct: 335 LKIEKAEADERKKMRELEREMEGIEEEDEEVEEGTGEKNPYLQMAMQFMKSGARVRRASN 394
Query: 403 KGLPQYLERGVDVKFSDM 420
K LP+YLERGVDVKF+D+
Sbjct: 395 KRLPEYLERGVDVKFTDV 412
>TAIR|locus:2157637 [details] [associations]
symbol:VAR1 "VARIEGATED 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA;IDA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010304 "PSII
associated light-harvesting complex II catabolic process"
evidence=RCA;TAS] [GO:0009579 "thylakoid" evidence=IDA] [GO:0010205
"photoinhibition" evidence=IMP] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
[GO:0009773 "photosynthetic electron transport in photosystem I"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0007275 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0006508 GO:GO:0009941
GO:GO:0004222 GO:GO:0016887 EMBL:AB023032 GO:GO:0010205
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0009535
HOGENOM:HOG000217276 KO:K03798 ProtClustDB:CLSN2688633
GO:GO:0010304 EMBL:AY126987 IPI:IPI00517420 RefSeq:NP_568604.1
UniGene:At.21670 UniGene:At.66720 ProteinModelPortal:Q9FH02
SMR:Q9FH02 STRING:Q9FH02 MEROPS:M41.024 PaxDb:Q9FH02 PRIDE:Q9FH02
EnsemblPlants:AT5G42270.1 GeneID:834232 KEGG:ath:AT5G42270
GeneFarm:4746 TAIR:At5g42270 InParanoid:Q9FH02 OMA:RARASMP
PhylomeDB:Q9FH02 Genevestigator:Q9FH02 GermOnline:AT5G42270
Uniprot:Q9FH02
Length = 704
Score = 646 (232.5 bits), Expect = 1.3e-72, Sum P(3) = 1.3e-72
Identities = 162/415 (39%), Positives = 229/415 (55%)
Query: 409 LERGVD-VKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVE 467
L+ VD +K D Y G + KTLLA+AVAGEAGV FFS +AS+FVE
Sbjct: 262 LQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVE 321
Query: 468 IYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLD 527
++VGVGASRVR L+++AK AP +VFIDE+DAVGR+RG G G ER+ T+NQLL +D
Sbjct: 322 LFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMD 381
Query: 528 GFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADD 587
GF G VI +A+TNRPD+LD AL+RPGRFDR++ + +P + GR++ILKVH+R K + D
Sbjct: 382 GFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVQILKVHSRGKAIGKD 441
Query: 588 VDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER- 646
VDY VA T G GA+L N++ AAI R EI+ D++ A + G ++K
Sbjct: 442 VDYEKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDEISDALERIIAGP-EKKNAV 500
Query: 647 -SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLS 705
S E R VA +EA A+V P+ + ++I PR G+ G + + G+ S
Sbjct: 501 VSEEKKRLVAYHEAGHALVGALMPEYDPVAKISIIPR-GQAGGLTFFAPSEERLESGLYS 559
Query: 706 RQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFVLGGLSDKHFGLSNF 765
R L + + V L R A+E+ G+ ++T + AR V + FG S
Sbjct: 560 RSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQMV------ERFGFSK- 612
Query: 766 WVADRINEIDTEALR---ILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQE 817
+I ++ L K+ +++DA V ELVEK + +E
Sbjct: 613 ----KIGQVAVGGAGGNPFLGQSMSSQKDYSMATADVVDAEVRELVEKAYVRAKE 663
Score = 75 (31.5 bits), Expect = 1.3e-72, Sum P(3) = 1.3e-72
Identities = 17/56 (30%), Positives = 30/56 (53%)
Query: 774 IDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLVELHGSLE 829
+D E ++ Y RAKEI+ ++L + L+EK+++ +EF L + G E
Sbjct: 646 VDAEVRELVEKAYVRAKEIITTQIDILHKLAQLLIEKETVDGEEFMSLF-IDGQAE 700
Score = 44 (20.5 bits), Expect = 1.3e-72, Sum P(3) = 1.3e-72
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 114 SKDLPIVSDRIAYTEIFSLKDEGKLKHVIKSPSGSLRQ 151
S DLP + Y+E + +GK++ V S GS+ Q
Sbjct: 115 SSDLPD-GTQWRYSEFLNAVKKGKVERVKFSKDGSVLQ 151
>UNIPROTKB|Q3AFJ8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 RefSeq:YP_359086.1
ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8 STRING:Q3AFJ8 MEROPS:M41.021
GeneID:3726212 KEGG:chy:CHY_0214 PATRIC:21273609 OMA:TGKADDE
BioCyc:CHYD246194:GJCN-215-MONOMER Uniprot:Q3AFJ8
Length = 619
Score = 714 (256.4 bits), Expect = 1.4e-72, Sum P(2) = 1.4e-72
Identities = 179/430 (41%), Positives = 249/430 (57%)
Query: 421 YRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSL 480
Y G R KTLLA+A+AGEAGV FFSIS S FVE++VGVGASRVR L
Sbjct: 183 YNELGARIPKGVLLFGQPGTGKTLLARAIAGEAGVPFFSISGSDFVEMFVGVGASRVRDL 242
Query: 481 YQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIAS 540
+++AK NAP +VFIDE+DAVGR+RG G G ER+ TLNQLLV +DGF +I IA+
Sbjct: 243 FEQAKKNAPCIVFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFNSNEGIIIIAA 302
Query: 541 TNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGM 600
TNRPDILDPAL+RPGRFDR I + P + GR EILKVH + KP+ DDVD +A T G
Sbjct: 303 TNRPDILDPALLRPGRFDRHIVVDTPDINGRKEILKVHVKGKPLGDDVDLDVLARRTPGF 362
Query: 601 VGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINE 658
GA+LAN+V AA+ R + I +++ +A + G ++K + S R VA +E
Sbjct: 363 TGADLANMVNEAALLAARRNKKVINMEEMEEAIERVIAGP-EKKSKVISEREKRLVAYHE 421
Query: 659 AAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLA 718
A A+V P + ++I PR GR GY + + + +++ LLD IT+ L
Sbjct: 422 AGHAMVGYLLPHTDPVHKISIIPR-GRAGGYTLLLPEEDR---SYMTKSQLLDEITMLLG 477
Query: 719 PRAADELWCGEGQLSTIWAETADNARSAARTFVLG-GLSDK----HFG-------LSNFW 766
R A+ L + +ST + A AR V+ G+S++ FG L
Sbjct: 478 GRVAEALVLED--ISTGARNDLERATETARRMVMEYGMSEELGPLTFGKGTEAVFLGRDL 535
Query: 767 VADR-INE-----IDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFH 820
DR +E ID E +I++ CY RA+EIL++N N+L V +L+E +++ +EF
Sbjct: 536 ARDRNYSEEIAYTIDKEVRKIIDSCYSRAEEILKKNINVLHLVATKLMEVETMEGEEFEK 595
Query: 821 LVELHGSLEP 830
L++ +G +P
Sbjct: 596 LMKENGLTKP 605
Score = 38 (18.4 bits), Expect = 1.4e-72, Sum P(2) = 1.4e-72
Identities = 20/80 (25%), Positives = 37/80 (46%)
Query: 124 IAYTEIFSLKDEGKLKHVIKSPSGSLRQKAEPVLVVLEDSRVLRTVLPSLDSNRKFWESW 183
+ Y E +SL ++G++ V ++ + + VL D +T P D+ E +
Sbjct: 35 LKYDEFYSLLEKGQVASVAIQTDRTINE----ISGVLRDGTRFKTRGPLEDA-----ELY 85
Query: 184 DELKIDSLCVNAYTPPLKKP 203
+LK ++ V PP K+P
Sbjct: 86 KDLKKMNVTVEIM-PP-KEP 103
>TIGR_CMR|CHY_0214 [details] [associations]
symbol:CHY_0214 "cell division protein FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
RefSeq:YP_359086.1 ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8
STRING:Q3AFJ8 MEROPS:M41.021 GeneID:3726212 KEGG:chy:CHY_0214
PATRIC:21273609 OMA:TGKADDE BioCyc:CHYD246194:GJCN-215-MONOMER
Uniprot:Q3AFJ8
Length = 619
Score = 714 (256.4 bits), Expect = 1.4e-72, Sum P(2) = 1.4e-72
Identities = 179/430 (41%), Positives = 249/430 (57%)
Query: 421 YRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSL 480
Y G R KTLLA+A+AGEAGV FFSIS S FVE++VGVGASRVR L
Sbjct: 183 YNELGARIPKGVLLFGQPGTGKTLLARAIAGEAGVPFFSISGSDFVEMFVGVGASRVRDL 242
Query: 481 YQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIAS 540
+++AK NAP +VFIDE+DAVGR+RG G G ER+ TLNQLLV +DGF +I IA+
Sbjct: 243 FEQAKKNAPCIVFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFNSNEGIIIIAA 302
Query: 541 TNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGM 600
TNRPDILDPAL+RPGRFDR I + P + GR EILKVH + KP+ DDVD +A T G
Sbjct: 303 TNRPDILDPALLRPGRFDRHIVVDTPDINGRKEILKVHVKGKPLGDDVDLDVLARRTPGF 362
Query: 601 VGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINE 658
GA+LAN+V AA+ R + I +++ +A + G ++K + S R VA +E
Sbjct: 363 TGADLANMVNEAALLAARRNKKVINMEEMEEAIERVIAGP-EKKSKVISEREKRLVAYHE 421
Query: 659 AAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLA 718
A A+V P + ++I PR GR GY + + + +++ LLD IT+ L
Sbjct: 422 AGHAMVGYLLPHTDPVHKISIIPR-GRAGGYTLLLPEEDR---SYMTKSQLLDEITMLLG 477
Query: 719 PRAADELWCGEGQLSTIWAETADNARSAARTFVLG-GLSDK----HFG-------LSNFW 766
R A+ L + +ST + A AR V+ G+S++ FG L
Sbjct: 478 GRVAEALVLED--ISTGARNDLERATETARRMVMEYGMSEELGPLTFGKGTEAVFLGRDL 535
Query: 767 VADR-INE-----IDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFH 820
DR +E ID E +I++ CY RA+EIL++N N+L V +L+E +++ +EF
Sbjct: 536 ARDRNYSEEIAYTIDKEVRKIIDSCYSRAEEILKKNINVLHLVATKLMEVETMEGEEFEK 595
Query: 821 LVELHGSLEP 830
L++ +G +P
Sbjct: 596 LMKENGLTKP 605
Score = 38 (18.4 bits), Expect = 1.4e-72, Sum P(2) = 1.4e-72
Identities = 20/80 (25%), Positives = 37/80 (46%)
Query: 124 IAYTEIFSLKDEGKLKHVIKSPSGSLRQKAEPVLVVLEDSRVLRTVLPSLDSNRKFWESW 183
+ Y E +SL ++G++ V ++ + + VL D +T P D+ E +
Sbjct: 35 LKYDEFYSLLEKGQVASVAIQTDRTINE----ISGVLRDGTRFKTRGPLEDA-----ELY 85
Query: 184 DELKIDSLCVNAYTPPLKKP 203
+LK ++ V PP K+P
Sbjct: 86 KDLKKMNVTVEIM-PP-KEP 103
>TIGR_CMR|BA_0064 [details] [associations]
symbol:BA_0064 "cell division protein FtsH" species:198094
"Bacillus anthracis str. Ames" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0051301 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0030163 HOGENOM:HOG000217277 TIGRFAMs:TIGR01241 KO:K03798
ProtClustDB:CLSK886567 HSSP:Q9LCZ4 OMA:QINMEEV RefSeq:NP_842633.1
RefSeq:YP_016667.1 RefSeq:YP_026351.1 ProteinModelPortal:Q81VX5
SMR:Q81VX5 IntAct:Q81VX5 DNASU:1086600
EnsemblBacteria:EBBACT00000009752 EnsemblBacteria:EBBACT00000016661
EnsemblBacteria:EBBACT00000022411 GeneID:1086600 GeneID:2819677
GeneID:2851579 KEGG:ban:BA_0064 KEGG:bar:GBAA_0064 KEGG:bat:BAS0064
BioCyc:BANT260799:GJAJ-73-MONOMER BioCyc:BANT261594:GJ7F-75-MONOMER
Uniprot:Q81VX5
Length = 633
Score = 723 (259.6 bits), Expect = 1.8e-71, P = 1.8e-71
Identities = 181/418 (43%), Positives = 246/418 (58%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+AVAGEAGV FFSIS S FVE++VGVGASRVR L++ AK NAP ++FIDE+DAVG
Sbjct: 208 KTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVG 267
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
R+RG G G ER+ TLNQLLV +DGF +I IA+TNRPDILDPAL+RPGRFDR+I
Sbjct: 268 RQRGAGLGGGHDEREQTLNQLLVEMDGFGANEGIIIIAATNRPDILDPALLRPGRFDRQI 327
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
+ +P + GR +LKVHAR KP+ ++++ A+A+ T G GA+L N++ AA+ R +
Sbjct: 328 TVDRPDVNGREAVLKVHARNKPLDENINLRAIATRTPGFSGADLENLLNEAALVAARQDK 387
Query: 622 TEITTDDLLQAAQIEERGMLDRKERSSETWRQ-VAINEAAMAVVAVNFPDLKNIEFVTIA 680
+I D+ +A G + SE R VA +EA V+ V + + VTI
Sbjct: 388 KKIDMSDIDEATDRVIAGPAKKSRVISEKERNIVAFHEAGHTVIGVVLDEADVVHKVTIV 447
Query: 681 PRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETA 740
PR G+ GY M ++ +++ LLD IT L R A+E+ GE +ST
Sbjct: 448 PR-GQAGGYAVMLPKEDRY---FMTKPELLDKITGLLGGRVAEEIVFGE--VSTGAHNDF 501
Query: 741 DNARSAARTFVLG-GLSDK----HFGLS---------NFW----VADRI-NEIDTEALRI 781
A AR V G+SDK FG S +F +D I +EID E I
Sbjct: 502 QRATGIARRMVTEFGMSDKLGPMQFGSSQGGQVFLGRDFHSEQNYSDAIAHEIDMEMQTI 561
Query: 782 LNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLVELHGSLEPMPPSIVDIR 839
+ CY RAK+IL NR+ LD + L+E ++L ++ HL + +G L P S D++
Sbjct: 562 MKECYARAKQILTDNRDKLDLIAKTLLEVETLDAEQINHLCD-YGRLPERPTSSADVK 618
>UNIPROTKB|P37476 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0008233 "peptidase activity" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IDA] [GO:0030428 "cell septum"
evidence=IDA] [GO:0043934 "sporulation" evidence=IMP]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0006950 GO:GO:0051301 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0007049
GO:GO:0030163 EMBL:AL009126 GenomeReviews:AL009126_GR GO:GO:0043934
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0008233
GO:GO:0030428 EMBL:D26185 HOGENOM:HOG000217276 KO:K03798 PIR:E69627
RefSeq:NP_387950.1 ProteinModelPortal:P37476 SMR:P37476
IntAct:P37476 MEROPS:M41.009 EnsemblBacteria:EBBACT00000001428
GeneID:938094 KEGG:bsu:BSU00690 PATRIC:18971613 GenoList:BSU00690
OMA:ENMSYST ProtClustDB:CLSK886567 BioCyc:BSUB:BSU00690-MONOMER
Uniprot:P37476
Length = 637
Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
Identities = 174/407 (42%), Positives = 238/407 (58%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKA AGEAGV FFSIS S FVE++VGVGASRVR L++ AK NAP ++FIDE+DAVG
Sbjct: 207 KTLLAKACAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCLIFIDEIDAVG 266
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
R+RG G G ER+ TLNQLLV +DGF +I IA+TNR DILDPAL+RPGRFDR+I
Sbjct: 267 RQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDPALLRPGRFDRQI 326
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
+ +P +IGR +LKVHAR KP+ + V+ ++A T G GA+L N++ AA+ R +
Sbjct: 327 TVDRPDVIGREAVLKVHARNKPLDETVNLKSIAMRTPGFSGADLENLLNEAALVAARQNK 386
Query: 622 TEITTDDLLQAAQIEERGMLDRKERSSETWRQ-VAINEAAMAVVAVNFPDLKNIEFVTIA 680
+I D+ +A G + S+ R VA +E V+ + + + VTI
Sbjct: 387 KKIDARDIDEATDRVIAGPAKKSRVISKKERNIVAYHEGGHTVIGLVLDEADMVHKVTIV 446
Query: 681 PRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETA 740
PR G+ GY M ++ + ++ LLD I L R A+E+ GE +ST
Sbjct: 447 PR-GQAGGYAVMLPREDRYFQ---TKPELLDKIVGLLGGRVAEEIIFGE--VSTGAHNDF 500
Query: 741 DNARSAARTFVLG-GLSDK----HFGLSN----FWVADRINE----------IDTEALRI 781
A + AR V G+S+K FG S F D NE ID E RI
Sbjct: 501 QRATNIARRMVTEFGMSEKLGPLQFGQSQGGQVFLGRDFNNEQNYSDQIAYEIDQEIQRI 560
Query: 782 LNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLVELHGSL 828
+ CYERAK+IL NR+ L+ + L++ ++L ++ HL++ HG+L
Sbjct: 561 IKECYERAKQILTENRDKLELIAQTLLKVETLDAEQIKHLID-HGTL 606
>TIGR_CMR|GSU_1809 [details] [associations]
symbol:GSU_1809 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952859.2 GeneID:2688702 KEGG:gsu:GSU1809 PATRIC:22026473
ProtClustDB:CLSK828573 BioCyc:GSUL243231:GH27-1860-MONOMER
Uniprot:Q74C66
Length = 610
Score = 687 (246.9 bits), Expect = 1.2e-67, P = 1.2e-67
Identities = 174/406 (42%), Positives = 242/406 (59%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+AVAGEAGV FFSIS S FVE++VGVGASRVR L+ + K NAP ++FIDE+DAVG
Sbjct: 199 KTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFVQGKKNAPCIIFIDEIDAVG 258
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
R RG G G ER+ TLNQLLV +DGFE VI IA+TNRPD+LDPAL+RPGRFDR++
Sbjct: 259 RHRGAGLGGGHDEREQTLNQLLVEMDGFESNEGVILIAATNRPDVLDPALLRPGRFDRQV 318
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
+P+P + GR ILKVH +K P+A DVD +A T G GA+L+N+V AA+ R +
Sbjct: 319 VVPQPDVKGREMILKVHTKKTPLASDVDLGVIARGTPGFSGADLSNVVNEAALLAARKDK 378
Query: 622 TEITTDDLLQAAQ-----IEERGMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEF 676
+ + D A +E R M+ +E T A +EA +VA P +
Sbjct: 379 SFVEMKDFDDAKDKVLMGVERRSMVISEEEKKNT----AYHEAGHTLVAKLIPGTDPVHK 434
Query: 677 VTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIW 736
V+I PR GR LG V M++ ++ K +++SLL+ I V + RAA+E+ E L+T
Sbjct: 435 VSIIPR-GRALG-VTMQLP-IEDKHSY-NKESLLNRIAVLMGGRAAEEIIFNE--LTTGA 488
Query: 737 AETADNARSAARTFVLG-GLSDKH----FG-----------LS---NFWVADRINEIDTE 777
+ A AR V G+S+K FG +S N+ A + EID E
Sbjct: 489 GNDIERATEIARKMVCEWGMSEKMGPVTFGKKEESIFLGRDMSMHKNYSEATAV-EIDEE 547
Query: 778 ALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLVE 823
+I++ Y R K++L N ++L + +L+EK++LT E +++
Sbjct: 548 IRKIIDGSYSRVKQLLNENLSVLHCLATQLIEKENLTGDEVDRIIK 593
>UNIPROTKB|P0C5C0 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:1773 "Mycobacterium tuberculosis" [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP;IDA] [GO:0006979 "response
to oxidative stress" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0040007
"growth" evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0040007 GO:GO:0006979 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0046872
EMBL:BX842583 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0010468
HOGENOM:HOG000217276 KO:K03798 PIR:C70956 RefSeq:NP_218127.1
RefSeq:NP_338259.1 RefSeq:YP_006517099.1 ProteinModelPortal:P0C5C0
SMR:P0C5C0 PRIDE:P0C5C0 EnsemblBacteria:EBMYCT00000001212
EnsemblBacteria:EBMYCT00000069111 GeneID:13317218 GeneID:885732
GeneID:926520 KEGG:mtc:MT3714 KEGG:mtu:Rv3610c KEGG:mtv:RVBD_3610c
PATRIC:18129921 TubercuList:Rv3610c OMA:RSEMIAR
ProtClustDB:CLSK792593 Uniprot:P0C5C0
Length = 760
Score = 663 (238.4 bits), Expect = 4.2e-67, Sum P(2) = 4.2e-67
Identities = 172/410 (41%), Positives = 237/410 (57%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+AVAGEAGV FF+IS S FVE++VGVGASRVR L+++AK N+P ++F+DE+DAVG
Sbjct: 209 KTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDAVG 268
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
R+RG G G ER+ TLNQLLV +DGF R VI IA+TNRPDILDPAL+RPGRFDR+I
Sbjct: 269 RQRGAGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDRQI 328
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
+ P L GR +L+VH++ KPMA D D +A T GM GA+LAN++ AA+ R+
Sbjct: 329 PVSNPDLAGRRAVLRVHSKGKPMAADADLDGLAKRTVGMTGADLANVINEAALLTARENG 388
Query: 622 TEITTDDLLQAAQIEERGMLDRKERS-SETWRQV-AINEAAMAVVAVNFPDLKNIEFVTI 679
T IT L +A G RK R SE +++ A +E + A PD++ I VTI
Sbjct: 389 TVITGPALEEAVD-RVIGGPRRKGRIISEQEKKITAYHEGGHTLAAWAMPDIEPIYKVTI 447
Query: 680 APRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGE---GQLSTIW 736
R GR G+ + K G+ +R ++ + + RAA+EL E G +S I
Sbjct: 448 LAR-GRTGGHAVAVPEEDK---GLRTRSEMIAQLVFAMGGRAAEELVFREPTTGAVSDI- 502
Query: 737 AETADNARSAARTF----VLGGLS--DKH--------FGLSNFWVADRINEIDTEALRIL 782
+ ARS F LG + +H G + + EID E +++
Sbjct: 503 EQATKIARSMVTEFGMSSKLGAVKYGSEHGDPFLGRTMGTQPDYSHEVAREIDEEVRKLI 562
Query: 783 NLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLVELHGSLEPMP 832
+ A EIL R++LD + EL+EK++L + E L + +E P
Sbjct: 563 EAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPE---LESIFADVEKRP 609
Score = 37 (18.1 bits), Expect = 4.2e-67, Sum P(2) = 4.2e-67
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 391 MKSGARVRRAYGKGLPQYLERGVD-VKFSDM 420
M+ GAR+ +GK + L + + F+D+
Sbjct: 135 MQGGARMGFGFGKSRAKQLSKDMPKTTFADV 165
>UNIPROTKB|Q5LNU8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 655 (235.6 bits), Expect = 2.3e-66, Sum P(2) = 2.3e-66
Identities = 168/397 (42%), Positives = 227/397 (57%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+A+AGEAGV FF+IS S FVE++VGVGASRVR ++++AK NAP +VFIDE+DAVG
Sbjct: 202 KTLLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVG 261
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
R RG G G ER+ TLNQLLV +DGFE VI +A+TNR D+LDPAL+RPGRFDR +
Sbjct: 262 RHRGAGYGGGNDEREQTLNQLLVEMDGFEANEGVIILAATNRKDVLDPALLRPGRFDRNV 321
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
+ P + GR +IL VHARK P+ DVD +A T G GA+LAN+V AA+ R GR
Sbjct: 322 TVGNPDIKGREKILGVHARKTPLGPDVDLRIIARGTPGFSGADLANLVNEAALMAARVGR 381
Query: 622 TEITTDDLLQAAQIEERGMLDRKERS----SETWRQVAINEAAMAVVAVNFPDLKNIEFV 677
+T +D A +++ M+ + RS + + A +EA AVV + P +
Sbjct: 382 RFVTMEDFENA---KDKVMMGAERRSMVLTQDQKEKTAYHEAGHAVVGLALPMCDPVYKA 438
Query: 678 TIAPRAGRELGYVRM--KMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTI 735
TI PR G LG V +MD + + R + + +A +AA+ L GE +S
Sbjct: 439 TIIPRGGA-LGMVVSLPEMDRLNWH-----RDECQQKLAMTMAGKAAEILKYGEDHVSNG 492
Query: 736 WAETADNARSAARTFVLG-GLSDK---------HFGLSN----FWVADRINE-IDTEALR 780
A A AR V+ G+SDK H G S F V+ E I+ E R
Sbjct: 493 PAGDIQQASQLARAMVMRWGMSDKVGNIDYAEAHEGYSGNTAGFSVSAHTKELIEEEVKR 552
Query: 781 ILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQE 817
+ Y++A IL R D + L+E ++LT +E
Sbjct: 553 FIQQGYDQAHAILTERREDWDRLAQGLLEYETLTGEE 589
Score = 38 (18.4 bits), Expect = 2.3e-66, Sum P(2) = 2.3e-66
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 121 SDRIAYTEIFSLKDEGKLKHVI 142
S Y+E S DEG + VI
Sbjct: 35 SQEKTYSEFVSAVDEGNVTKVI 56
>TIGR_CMR|SPO_3105 [details] [associations]
symbol:SPO_3105 "ATP-dependent metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 655 (235.6 bits), Expect = 2.3e-66, Sum P(2) = 2.3e-66
Identities = 168/397 (42%), Positives = 227/397 (57%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+A+AGEAGV FF+IS S FVE++VGVGASRVR ++++AK NAP +VFIDE+DAVG
Sbjct: 202 KTLLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVG 261
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
R RG G G ER+ TLNQLLV +DGFE VI +A+TNR D+LDPAL+RPGRFDR +
Sbjct: 262 RHRGAGYGGGNDEREQTLNQLLVEMDGFEANEGVIILAATNRKDVLDPALLRPGRFDRNV 321
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
+ P + GR +IL VHARK P+ DVD +A T G GA+LAN+V AA+ R GR
Sbjct: 322 TVGNPDIKGREKILGVHARKTPLGPDVDLRIIARGTPGFSGADLANLVNEAALMAARVGR 381
Query: 622 TEITTDDLLQAAQIEERGMLDRKERS----SETWRQVAINEAAMAVVAVNFPDLKNIEFV 677
+T +D A +++ M+ + RS + + A +EA AVV + P +
Sbjct: 382 RFVTMEDFENA---KDKVMMGAERRSMVLTQDQKEKTAYHEAGHAVVGLALPMCDPVYKA 438
Query: 678 TIAPRAGRELGYVRM--KMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTI 735
TI PR G LG V +MD + + R + + +A +AA+ L GE +S
Sbjct: 439 TIIPRGGA-LGMVVSLPEMDRLNWH-----RDECQQKLAMTMAGKAAEILKYGEDHVSNG 492
Query: 736 WAETADNARSAARTFVLG-GLSDK---------HFGLSN----FWVADRINE-IDTEALR 780
A A AR V+ G+SDK H G S F V+ E I+ E R
Sbjct: 493 PAGDIQQASQLARAMVMRWGMSDKVGNIDYAEAHEGYSGNTAGFSVSAHTKELIEEEVKR 552
Query: 781 ILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQE 817
+ Y++A IL R D + L+E ++LT +E
Sbjct: 553 FIQQGYDQAHAILTERREDWDRLAQGLLEYETLTGEE 589
Score = 38 (18.4 bits), Expect = 2.3e-66, Sum P(2) = 2.3e-66
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 121 SDRIAYTEIFSLKDEGKLKHVI 142
S Y+E S DEG + VI
Sbjct: 35 SQEKTYSEFVSAVDEGNVTKVI 56
>UNIPROTKB|Q2GIT4 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 665 (239.2 bits), Expect = 2.5e-65, P = 2.5e-65
Identities = 160/390 (41%), Positives = 232/390 (59%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+A+AGEA V FFSIS S FVE++VGVGASRVR ++++ K +AP ++F+DE+DAVG
Sbjct: 204 KTLLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVDEIDAVG 263
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
R RG+ G G ER+ TLNQLLV +DGFE V+ IA+TNRPD+LDPAL+RPGRFDR++
Sbjct: 264 RHRGIGLGGGNDEREQTLNQLLVEMDGFESNEGVVIIAATNRPDVLDPALLRPGRFDRQV 323
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
I P + GR +I+ VHA+K P+A DVD +A T G GA+LAN+V AA+ R +
Sbjct: 324 TISIPDINGREKIIAVHAKKVPLAPDVDLRVIARGTPGFSGADLANLVNEAALIAARLDK 383
Query: 622 TEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTI 679
+T D A G +RK E R A +EA AVVA + P I TI
Sbjct: 384 KIVTMCDFEYARDKVMMGA-ERKSMVMREEERRLTAYHEAGHAVVAFHNPASDPIHKATI 442
Query: 680 APRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAET 739
PR GR LG V + + +R+ +L +TV + RAA+EL G ++++ +
Sbjct: 443 IPR-GRSLGLVMRLPETDRVSH---TREKMLADLTVAMGGRAAEELIFGYNKVTSGASSD 498
Query: 740 ADNARSAARTFVLG-GLSDK-----HFGLSNFWVADRI-NEIDTEALRILNLCYERAKEI 792
A A++ V+ G+SD H ++ ++ + N ID E I++ AK++
Sbjct: 499 IKQATDLAKSMVMKWGMSDSVGPLYHSDEAHERISTNLANLIDDEVKSIVSTALAEAKDV 558
Query: 793 LQRNRNLLDAVVNELVEKKSLTKQEFFHLV 822
L ++ + L A+ L+E ++LT + ++
Sbjct: 559 LTKHSDALHAIAANLLEFETLTGDDIADII 588
>TIGR_CMR|APH_1179 [details] [associations]
symbol:APH_1179 "ATP-dependent metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0000910 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 665 (239.2 bits), Expect = 2.5e-65, P = 2.5e-65
Identities = 160/390 (41%), Positives = 232/390 (59%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+A+AGEA V FFSIS S FVE++VGVGASRVR ++++ K +AP ++F+DE+DAVG
Sbjct: 204 KTLLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVDEIDAVG 263
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
R RG+ G G ER+ TLNQLLV +DGFE V+ IA+TNRPD+LDPAL+RPGRFDR++
Sbjct: 264 RHRGIGLGGGNDEREQTLNQLLVEMDGFESNEGVVIIAATNRPDVLDPALLRPGRFDRQV 323
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
I P + GR +I+ VHA+K P+A DVD +A T G GA+LAN+V AA+ R +
Sbjct: 324 TISIPDINGREKIIAVHAKKVPLAPDVDLRVIARGTPGFSGADLANLVNEAALIAARLDK 383
Query: 622 TEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTI 679
+T D A G +RK E R A +EA AVVA + P I TI
Sbjct: 384 KIVTMCDFEYARDKVMMGA-ERKSMVMREEERRLTAYHEAGHAVVAFHNPASDPIHKATI 442
Query: 680 APRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAET 739
PR GR LG V + + +R+ +L +TV + RAA+EL G ++++ +
Sbjct: 443 IPR-GRSLGLVMRLPETDRVSH---TREKMLADLTVAMGGRAAEELIFGYNKVTSGASSD 498
Query: 740 ADNARSAARTFVLG-GLSDK-----HFGLSNFWVADRI-NEIDTEALRILNLCYERAKEI 792
A A++ V+ G+SD H ++ ++ + N ID E I++ AK++
Sbjct: 499 IKQATDLAKSMVMKWGMSDSVGPLYHSDEAHERISTNLANLIDDEVKSIVSTALAEAKDV 558
Query: 793 LQRNRNLLDAVVNELVEKKSLTKQEFFHLV 822
L ++ + L A+ L+E ++LT + ++
Sbjct: 559 LTKHSDALHAIAANLLEFETLTGDDIADII 588
>TAIR|locus:2011952 [details] [associations]
symbol:FTSH1 "FTSH protease 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0031977
"thylakoid lumen" evidence=IDA] [GO:0010206 "photosystem II repair"
evidence=TAS] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0007275
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 eggNOG:COG0465
TIGRFAMs:TIGR01241 GO:GO:0009535 GO:GO:0031977 GO:GO:0004176
GO:GO:0010206 EMBL:AC007980 EMBL:X99808 EMBL:AY091095 EMBL:AY123034
EMBL:Y12780 IPI:IPI00518805 PIR:G96538 RefSeq:NP_564563.1
UniGene:At.21777 ProteinModelPortal:Q39102 SMR:Q39102 STRING:Q39102
MEROPS:M41.020 PaxDb:Q39102 PRIDE:Q39102 EnsemblPlants:AT1G50250.1
GeneID:841447 KEGG:ath:AT1G50250 GeneFarm:2667 TAIR:At1g50250
HOGENOM:HOG000217276 InParanoid:Q39102 KO:K03798 OMA:GGNPAMN
PhylomeDB:Q39102 ProtClustDB:CLSN2688633 Genevestigator:Q39102
GermOnline:AT1G50250 GO:GO:0010304 Uniprot:Q39102
Length = 716
Score = 633 (227.9 bits), Expect = 8.7e-65, Sum P(2) = 8.7e-65
Identities = 162/425 (38%), Positives = 233/425 (54%)
Query: 409 LERGVD-VKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVE 467
L+ VD +K D Y G + KTLLA+AVAGEAGV FFS +AS+FVE
Sbjct: 274 LQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVE 333
Query: 468 IYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLD 527
++VGVGASRVR L+++AK AP +VFIDE+DAVGR+RG G G ER+ T+NQLL +D
Sbjct: 334 LFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMD 393
Query: 528 GFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADD 587
GF G VI +A+TNRPD+LD AL+RPGRFDR++ + +P + GR++IL+VH+R K + D
Sbjct: 394 GFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALGKD 453
Query: 588 VDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER- 646
VD+ VA T G GA+L N++ AAI R EI+ D++ A + G ++K
Sbjct: 454 VDFDKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDEISDALERIIAGP-EKKNAV 512
Query: 647 -SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLS 705
S E R VA +EA A+V P+ + ++I PR G+ G + + G+ S
Sbjct: 513 VSEEKKRLVAYHEAGHALVGALMPEYDPVAKISIIPR-GQAGGLTFFAPSEERLESGLYS 571
Query: 706 RQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFVLGGLSDKHFGLSNF 765
R L + + V L R A+E+ G+ ++T + AR + + FG S
Sbjct: 572 RSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQMI------ERFGFSK- 624
Query: 766 WVADRINEIDTEALR---ILNLCYERAKEILQRNRNLLDAVVNELVEK--KSLTKQEFFH 820
+I ++ + K+ +++DA V ELVEK K T+ H
Sbjct: 625 ----KIGQVAVGGPGGNPFMGQQMSSQKDYSMATADIVDAEVRELVEKAYKRATEIITTH 680
Query: 821 LVELH 825
+ LH
Sbjct: 681 IDILH 685
Score = 45 (20.9 bits), Expect = 8.7e-65, Sum P(2) = 8.7e-65
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 114 SKDLPIVSDRIAYTEIFSLKDEGKLKHVIKSPSGSLRQ 151
S DLP S + Y+E + +GK++ V S GS+ Q
Sbjct: 125 SSDLPEGS-QWRYSEFLNAVKKGKVERVRFSKDGSVVQ 161
>UNIPROTKB|Q2GFA1 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST
MEROPS:M41.001 ProtClustDB:CLSK749654 RefSeq:YP_507882.1
ProteinModelPortal:Q2GFA1 SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708
KEGG:ech:ECH_1098 PATRIC:20577534
BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 655 (235.6 bits), Expect = 2.9e-64, P = 2.9e-64
Identities = 161/391 (41%), Positives = 230/391 (58%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+A+AGEA V FFSIS S FVE++VGVGASRVR ++++ K NAP ++FIDE+DAVG
Sbjct: 202 KTLLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCIIFIDEIDAVG 261
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
R RG+ G G ER+ TLNQLLV +DGFE VI IA+TNRPD+LD AL+RPGRFDR++
Sbjct: 262 RHRGIGLGGGNDEREQTLNQLLVEMDGFESNEGVIIIAATNRPDVLDSALLRPGRFDRQV 321
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
I P + GR +I+ VH +K P A DV+ +A T G GA+LAN+V AA+ R +
Sbjct: 322 TISIPDINGREKIINVHIKKVPTAPDVNIRTIARGTPGFSGADLANLVNEAALIAARLNK 381
Query: 622 TEITTDDLLQAAQIEERGMLDRKE--RSSETWRQVAINEAAMAVVAVNFPDLKN-IEFVT 678
+T D A G +RK + E R A +EA A++A F + + I T
Sbjct: 382 KIVTMSDFEYARDKVMMGA-ERKSLMMTEEERRLTAYHEAGHAIIAF-FTEASDPIHKAT 439
Query: 679 IAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAE 738
I PR GR LG V + + +R+ ++ +TV + RAA+EL G ++++ +
Sbjct: 440 IIPR-GRSLGLVMRLPESDRVSH---TREKMIADLTVAMGGRAAEELIFGYHKVTSGASS 495
Query: 739 TADNARSAARTFVLG-GLSDK-----HFGLSNFWVADRI-NEIDTEALRILNLCYERAKE 791
A A+ V+ G+SDK H N +++ + N ID E I+ ERAK
Sbjct: 496 DIKQATDLAKAMVMKWGMSDKVGPLYHNDDKNDTISNNLANLIDEEVKLIVTSALERAKS 555
Query: 792 ILQRNRNLLDAVVNELVEKKSLTKQEFFHLV 822
+L + L V L+E ++LT ++ +++
Sbjct: 556 LLNEHLESLHIVAKNLLEFETLTGEDIKNII 586
>TIGR_CMR|ECH_1098 [details] [associations]
symbol:ECH_1098 "ATP-dependent metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 GO:GO:0000910
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_507882.1 ProteinModelPortal:Q2GFA1
SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708 KEGG:ech:ECH_1098
PATRIC:20577534 BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 655 (235.6 bits), Expect = 2.9e-64, P = 2.9e-64
Identities = 161/391 (41%), Positives = 230/391 (58%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+A+AGEA V FFSIS S FVE++VGVGASRVR ++++ K NAP ++FIDE+DAVG
Sbjct: 202 KTLLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCIIFIDEIDAVG 261
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
R RG+ G G ER+ TLNQLLV +DGFE VI IA+TNRPD+LD AL+RPGRFDR++
Sbjct: 262 RHRGIGLGGGNDEREQTLNQLLVEMDGFESNEGVIIIAATNRPDVLDSALLRPGRFDRQV 321
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
I P + GR +I+ VH +K P A DV+ +A T G GA+LAN+V AA+ R +
Sbjct: 322 TISIPDINGREKIINVHIKKVPTAPDVNIRTIARGTPGFSGADLANLVNEAALIAARLNK 381
Query: 622 TEITTDDLLQAAQIEERGMLDRKE--RSSETWRQVAINEAAMAVVAVNFPDLKN-IEFVT 678
+T D A G +RK + E R A +EA A++A F + + I T
Sbjct: 382 KIVTMSDFEYARDKVMMGA-ERKSLMMTEEERRLTAYHEAGHAIIAF-FTEASDPIHKAT 439
Query: 679 IAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAE 738
I PR GR LG V + + +R+ ++ +TV + RAA+EL G ++++ +
Sbjct: 440 IIPR-GRSLGLVMRLPESDRVSH---TREKMIADLTVAMGGRAAEELIFGYHKVTSGASS 495
Query: 739 TADNARSAARTFVLG-GLSDK-----HFGLSNFWVADRI-NEIDTEALRILNLCYERAKE 791
A A+ V+ G+SDK H N +++ + N ID E I+ ERAK
Sbjct: 496 DIKQATDLAKAMVMKWGMSDKVGPLYHNDDKNDTISNNLANLIDEEVKLIVTSALERAKS 555
Query: 792 ILQRNRNLLDAVVNELVEKKSLTKQEFFHLV 822
+L + L V L+E ++LT ++ +++
Sbjct: 556 LLNEHLESLHIVAKNLLEFETLTGEDIKNII 586
>UNIPROTKB|Q55700 [details] [associations]
symbol:ftsH2 "ATP-dependent zinc metalloprotease FtsH 2"
species:1111708 "Synechocystis sp. PCC 6803 substr. Kazusa"
[GO:0010206 "photosystem II repair" evidence=IMP] [GO:0042651
"thylakoid membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009523 "photosystem II" evidence=IDA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:BA000022 GenomeReviews:BA000022_GR GO:GO:0042651 GO:GO:0010206
HOGENOM:HOG000217276 KO:K03798 PIR:S76378 RefSeq:NP_442160.1
RefSeq:YP_005652219.1 ProteinModelPortal:Q55700 SMR:Q55700
IntAct:Q55700 STRING:Q55700 MEROPS:M41.017 GeneID:12253438
GeneID:952628 KEGG:syn:slr0228 KEGG:syy:SYNGTS_2266 PATRIC:23841938
OMA:NTASTRM Uniprot:Q55700
Length = 627
Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
Identities = 158/412 (38%), Positives = 239/412 (58%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKA+AGEAGV FFSIS S+FVE++VGVGASRVR L+++AK+NAP ++FIDE+DAVG
Sbjct: 218 KTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFIDEIDAVG 277
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
R+RG G G ER+ TLNQLL +DGFEG +I IA+TNRPD+LD AL+RPGRFDR++
Sbjct: 278 RQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDSALMRPGRFDRQV 337
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
+ P GR EIL+VHAR K +A +V ++A T G GA+LAN++ AAI R +
Sbjct: 338 MVDAPDYSGRKEILEVHARNKKLAPEVSIDSIARRTPGFSGADLANLLNEAAILTARRRK 397
Query: 622 TEITTDDLLQAAQIEERGMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAP 681
+ IT ++ A GM S++ R +A +E A+V D ++ VT+ P
Sbjct: 398 SAITLLEIDDAVDRVVAGMEGTPLVDSKSKRLIAYHEVGHAIVGTLLKDHDPVQKVTLIP 457
Query: 682 RAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETAD 741
R G+ G + ++G+ ++ L+ I + RAA+E G+ +++T
Sbjct: 458 R-GQAQGLTWFTPNE---EQGLTTKAQLMARIAGAMGGRAAEEEVFGDDEVTTGAGGDLQ 513
Query: 742 NARSAARTFV-------LGGLSDKHFGLSNFWVADRINE----------IDTEALRILNL 784
AR V LG +S + G F +N ID + ++
Sbjct: 514 QVTEMARQMVTRFGMSNLGPISLESSGGEVFLGGGLMNRSEYSEEVATRIDAQVRQLAEQ 573
Query: 785 CYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLVELHGSLEPMPPSIV 836
++ A++I+Q R ++D +V+ L+EK+++ +EF +V + + P+ ++
Sbjct: 574 GHQMARKIVQEQREVVDRLVDLLIEKETIDGEEFRQIVAEYAEV-PVKEQLI 624
>TIGR_CMR|NSE_0423 [details] [associations]
symbol:NSE_0423 "ATP-dependent metalloprotease FtsH"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 EMBL:CP000237 GenomeReviews:CP000237_GR
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001 RefSeq:YP_506309.1
ProteinModelPortal:Q2GDY7 SMR:Q2GDY7 STRING:Q2GDY7 GeneID:3931660
KEGG:nse:NSE_0423 PATRIC:22680905 OMA:ENIESLH
ProtClustDB:CLSK749654 BioCyc:NSEN222891:GHFU-445-MONOMER
Uniprot:Q2GDY7
Length = 636
Score = 644 (231.8 bits), Expect = 4.2e-63, P = 4.2e-63
Identities = 164/403 (40%), Positives = 229/403 (56%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKA+AGEA V FFSIS S FVE++VGVGASRVR ++++ K NAP ++FIDE+DAVG
Sbjct: 203 KTLLAKAIAGEAKVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCLIFIDEIDAVG 262
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
R RG+ G G ER+ TLNQLLV +DGFE VI IA+TNRPD+LDPAL+RPGRFDR+I
Sbjct: 263 RHRGVGFGGGNDEREQTLNQLLVEMDGFEANEGVIIIAATNRPDVLDPALLRPGRFDRQI 322
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
I P + GR +IL+VH +K P A +V+ +A T G GA+LAN+V +A+ R +
Sbjct: 323 TISIPDIAGRQKILEVHLKKIPTAPNVEVSIIARGTPGFSGADLANLVNESALIAARRNK 382
Query: 622 TEITTDDLLQAAQIEERGMLDRKE--RSSETWRQVAINEAAMAVVAVNFPDLKNIEFVTI 679
+T +D A GM +RK E A +EA A+ ++ I TI
Sbjct: 383 KVVTNEDFEYARDKILMGM-ERKSLVMREEEKLLTAYHEAGHAITSLKLEASDPIHKATI 441
Query: 680 APRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAET 739
PR GR LG V +H + +R + + V + RAA+++ G+ + ++ A
Sbjct: 442 IPR-GRALGLVMRLPEHDRVS---FTRAKMHADLIVAMGGRAAEQVIFGDDKTTSGAASD 497
Query: 740 ADNARSAARTFVLG-GLSDKH----FGLSN-----FWVADRINEIDTEALRILNLCYERA 789
A AR+ V G+S+K +G N + N ID+E +++ + A
Sbjct: 498 IKQATHLARSMVTKWGMSEKVGPLLYGEQNDPNNHILSIEMSNLIDSEVKQLVTDALKEA 557
Query: 790 KEILQRNRNLLDAVVNELVEKKSLTKQEFFHLVELHGSLEPMP 832
+IL N L V L+E ++LT QE L+E L+ P
Sbjct: 558 TKILNENIESLHRVAKALLEYETLTGQELSDLLEGKSFLKKAP 600
>TIGR_CMR|CBU_1352 [details] [associations]
symbol:CBU_1352 "ATP-dependent metalloprotease FtsH"
species:227377 "Coxiella burnetii RSA 493" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HSSP:P28691 HOGENOM:HOG000217276 KO:K03798
MEROPS:M41.001 OMA:RSIIDQC RefSeq:NP_820341.1
ProteinModelPortal:Q83BY5 SMR:Q83BY5 PRIDE:Q83BY5 GeneID:1209258
KEGG:cbu:CBU_1352 PATRIC:17931447 ProtClustDB:CLSK914722
BioCyc:CBUR227377:GJ7S-1342-MONOMER Uniprot:Q83BY5
Length = 647
Score = 642 (231.1 bits), Expect = 6.9e-63, P = 6.9e-63
Identities = 162/414 (39%), Positives = 241/414 (58%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKAVAGEA V FF+IS S FVE++VGVGASRVR ++ +AK AP ++FIDE+DAVG
Sbjct: 202 KTLLAKAVAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFDQAKKQAPCIIFIDEIDAVG 261
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
R RG G G ER+ TLNQLLV +DGFEG+ +I +A+TNRPD+LDPAL+RPGRFDR++
Sbjct: 262 RHRGAGLGGGHDEREQTLNQLLVEMDGFEGKEGIIVMAATNRPDVLDPALLRPGRFDRQV 321
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
+P P + GR ILKVH K P+A DV +A T G GA+LANIV AA+ R+ +
Sbjct: 322 VVPLPDIKGREYILKVHMNKLPLAKDVKASVIARGTPGFSGADLANIVNEAALFAARENK 381
Query: 622 TEITTDDLLQAAQIEERGMLDRKERS---SETWRQV-AINEAAMAVVAVNFPDLKNIEFV 677
+++ + +A +++ M+ + RS S+ +++ A +EA A+V ++ + + V
Sbjct: 382 KDVSMSEFERA---KDKIMMGAERRSMVMSDDEKKLTAYHEAGHAIVGLHMLEHDPVYKV 438
Query: 678 TIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWA 737
TI PR GR LG +H ++ ++++ L + R A+E+ G ++T +
Sbjct: 439 TIIPR-GRALGVTMFLPEHDRYS---MTKRRLECQLAGLFGGRIAEEIIFGPDLVTTGAS 494
Query: 738 ETADNARSAARTFVLG-GLSDK-------------HFGLSNFW---VADRIN-EIDTEAL 779
+ A AR V GLS K G S ++D N EID+E
Sbjct: 495 NDIEKATEIARNMVTKWGLSQKLGPLTYREEEGEVFLGRSVTQRKDISDATNKEIDSEVR 554
Query: 780 RILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLVELHGSLEPMPP 833
RI++ Y AK+ L+ + L + L++ +++ + + + E+ EP PP
Sbjct: 555 RIVDTAYTTAKQTLEEHIEQLHLMAKALIKYETIGEAQ---IKEILAGKEPSPP 605
>TAIR|locus:2009235 [details] [associations]
symbol:FTSH8 "FTSH protease 8" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA;IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=TAS] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AC007592
eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798 GO:GO:0010304
ProtClustDB:CLSN2679937 EMBL:AF419565 EMBL:BT002649 EMBL:BT003813
EMBL:AY045951 IPI:IPI00539195 RefSeq:NP_563766.3 UniGene:At.17054
ProteinModelPortal:Q8W585 SMR:Q8W585 STRING:Q8W585 MEROPS:M41.025
PaxDb:Q8W585 PRIDE:Q8W585 ProMEX:Q8W585 EnsemblPlants:AT1G06430.1
GeneID:837154 KEGG:ath:AT1G06430 GeneFarm:2474 TAIR:At1g06430
InParanoid:Q8W585 OMA:NANADEQ PhylomeDB:Q8W585
Genevestigator:Q8W585 Uniprot:Q8W585
Length = 685
Score = 617 (222.3 bits), Expect = 1.8e-62, Sum P(2) = 1.8e-62
Identities = 160/400 (40%), Positives = 228/400 (57%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKA+AGEAGV FFSIS S+FVE++VGVGASRVR L+++AK+NAP +VF+DE+DAVG
Sbjct: 266 KTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVG 325
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
R+RG G G ER+ TLNQLL +DGFEG VI +A+TNR DILD AL+RPGRFDR++
Sbjct: 326 RQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQV 385
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
+ P + GR +ILKVH+ K V +A T G GA+LAN++ AAI R G+
Sbjct: 386 SVDVPDVKGRTDILKVHSGNKKFESGVSLEVIAMRTPGFSGADLANLLNEAAILAGRRGK 445
Query: 622 TEITT---DDLLQ--AAQIEERGMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEF 676
T I++ DD + A +E M D K +S VA +E A+ P ++
Sbjct: 446 TAISSKEIDDSIDRIVAGMEGTVMTDGKSKSL-----VAYHEVGHAICGTLTPGHDAVQK 500
Query: 677 VTIAPRA-GRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTI 735
VT+ PR R L + D ++S+Q L I L RAA+E+ GE +++T
Sbjct: 501 VTLIPRGQARGLTWFIPSDDPT-----LISKQQLFARIVGGLGGRAAEEVIFGESEVTTG 555
Query: 736 WAETADNARSAARTFV-------LG--GLSDKHFG-------LSNFWVADRI-NEIDTEA 778
A+ V +G L D ++ +++++ N+IDT
Sbjct: 556 AVSDLQQITGLAKQMVTTFGMSEIGPWSLMDSSEQSDVIMRMMARNSMSEKLANDIDTAV 615
Query: 779 LRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEF 818
+ + YE A ++ NR +D +V L+EK++++ EF
Sbjct: 616 KTLSDKAYEIALSQIRNNREAMDKIVEILLEKETMSGDEF 655
Score = 39 (18.8 bits), Expect = 1.8e-62, Sum P(2) = 1.8e-62
Identities = 7/31 (22%), Positives = 18/31 (58%)
Query: 119 IVSDRIAYTEIFSLKDEGKLKHVIKSPSGSL 149
+ S R++Y+ D+G+++ V +G++
Sbjct: 80 VSSSRMSYSRFLEYLDKGRVEKVDLYENGTI 110
>TAIR|locus:2052806 [details] [associations]
symbol:VAR2 "VARIEGATED 2" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0008237 "metallopeptidase activity"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010027
"thylakoid membrane organization" evidence=RCA;IMP] [GO:0009507
"chloroplast" evidence=IDA] [GO:0010205 "photoinhibition"
evidence=IMP] [GO:0031977 "thylakoid lumen" evidence=IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA;TAS]
[GO:0016020 "membrane" evidence=IDA] [GO:0030163 "protein catabolic
process" evidence=IDA] [GO:0072593 "reactive oxygen species
metabolic process" evidence=IDA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009902 "chloroplast relocation" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0034660 "ncRNA
metabolic process" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] [GO:0042744 "hydrogen peroxide
catabolic process" evidence=RCA] [GO:0042793 "transcription from
plastid promoter" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0010206
"photosystem II repair" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0008237 GO:GO:0004222 EMBL:AC004669
GO:GO:0010027 GO:GO:0072593 GO:GO:0010205 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0031977
GO:GO:0004176 GO:GO:0010206 HOGENOM:HOG000217276 KO:K03798
GO:GO:0010304 EMBL:AF135189 EMBL:AY045599 EMBL:AY093791
EMBL:AK221155 IPI:IPI00546467 PIR:F84714 RefSeq:NP_850156.1
UniGene:At.22024 UniGene:At.71129 UniGene:At.75189
ProteinModelPortal:O80860 SMR:O80860 IntAct:O80860 STRING:O80860
MEROPS:M41.005 World-2DPAGE:0003:O80860 PaxDb:O80860 PRIDE:O80860
ProMEX:O80860 EnsemblPlants:AT2G30950.1 GeneID:817646
KEGG:ath:AT2G30950 GeneFarm:2504 TAIR:At2g30950 InParanoid:O80860
OMA:LEIIAMR PhylomeDB:O80860 ProtClustDB:CLSN2679937
Genevestigator:O80860 Uniprot:O80860
Length = 695
Score = 617 (222.3 bits), Expect = 1.8e-62, Sum P(2) = 1.8e-62
Identities = 163/400 (40%), Positives = 229/400 (57%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKA+AGEAGV FFSIS S+FVE++VGVGASRVR L+++AK+NAP +VF+DE+DAVG
Sbjct: 273 KTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVG 332
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
R+RG G G ER+ TLNQLL +DGFEG VI +A+TNR DILD AL+RPGRFDR++
Sbjct: 333 RQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQV 392
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
+ P + GR +ILKVHA K +DV +A T G GA+LAN++ AAI R R
Sbjct: 393 SVDVPDVKGRTDILKVHAGNKKFDNDVSLEIIAMRTPGFSGADLANLLNEAAILAGRRAR 452
Query: 622 TEITT---DDLLQ--AAQIEERGMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEF 676
T I++ DD + A +E M D K +S VA +E AV P ++
Sbjct: 453 TSISSKEIDDSIDRIVAGMEGTVMTDGKSKSL-----VAYHEVGHAVCGTLTPGHDAVQK 507
Query: 677 VTIAPRA-GRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTI 735
VT+ PR R L + D ++S+Q L I L RAA+E+ G+ +++T
Sbjct: 508 VTLIPRGQARGLTWFIPSDDPT-----LISKQQLFARIVGGLGGRAAEEIIFGDSEVTTG 562
Query: 736 WAETADNARSAARTFVLG-GLSD-KHFGLSNFW--------------VADRINE-IDTEA 778
AR V G+SD + L + +++++ E ID+
Sbjct: 563 AVGDLQQITGLARQMVTTFGMSDIGPWSLMDSSAQSDVIMRMMARNSMSEKLAEDIDSAV 622
Query: 779 LRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEF 818
++ + YE A ++ NR +D +V L+EK+++ EF
Sbjct: 623 KKLSDSAYEIALSHIKNNREAMDKLVEVLLEKETIGGDEF 662
Score = 39 (18.8 bits), Expect = 1.8e-62, Sum P(2) = 1.8e-62
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 447 KAVAGEAGVNFFSISASQFVE 467
KA A E GV+ +S S+F+E
Sbjct: 79 KANADEQGVSSSRMSYSRFLE 99
>TIGR_CMR|SO_1197 [details] [associations]
symbol:SO_1197 "ATP-dependent metalloprotease FtsH"
species:211586 "Shewanella oneidensis MR-1" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051301 "cell division" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006200
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
OMA:RSIIDQC RefSeq:NP_716822.2 ProteinModelPortal:Q8EHM2 SMR:Q8EHM2
GeneID:1169025 KEGG:son:SO_1197 PATRIC:23522048
ProtClustDB:CLSK906146 Uniprot:Q8EHM2
Length = 652
Score = 637 (229.3 bits), Expect = 2.3e-62, P = 2.3e-62
Identities = 162/411 (39%), Positives = 238/411 (57%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKA+AGE+ V FF+IS S FVE++VGVGASRVR ++++AK +AP ++FIDE+DAVG
Sbjct: 203 KTLLAKAIAGESKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKSAPCIIFIDEIDAVG 262
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
R+RG G G ER+ TLNQ+LV +DGFEG +I IA+TNRPD+LD AL+RPGRFDR++
Sbjct: 263 RQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDSALLRPGRFDRQV 322
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
+ P + GR +ILKVH RK P+++DV +A T G GA+LAN+V AA+ R R
Sbjct: 323 VVGLPDVRGREQILKVHMRKVPLSEDVKASVIARGTPGFSGADLANLVNEAALFAARGNR 382
Query: 622 TEITTDDLLQAAQIEERGMLDRKERS---SETWRQV-AINEAAMAVVAVNFPDLKNIEFV 677
+ ++ +A +++ M+ + RS SE +++ A +EA A+V P+ + V
Sbjct: 383 RVVGMEEFERA---KDKIMMGAERRSMVMSEAEKEMTAYHEAGHAIVGCLVPEHDPVHKV 439
Query: 678 TIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWA 737
TI PR GR LG + + SR+ L I+V R A+EL G ++ST +
Sbjct: 440 TIIPR-GRALGVTFFLPEADAISQ---SRRKLESQISVAYGGRLAEELIYGTEKVSTGAS 495
Query: 738 ETADNARSAARTFVLG-GLSDK-----------------HFGLSNFWVADRINEIDTEAL 779
+ A S AR V G SDK G + + IDTE
Sbjct: 496 QDIKYATSIARNMVTQWGFSDKLGPLLYAEEEGEVFLGRSMGKAKAMSDETATLIDTEVK 555
Query: 780 RILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLVELHGSLEP 830
++ Y RAK+ILQ N ++L ++ + L++ +++ + L+ +P
Sbjct: 556 AFIDKNYSRAKQILQDNVDILHSMKDALMKYETIDSLQIDDLMNRREVRQP 606
>TIGR_CMR|DET_0391 [details] [associations]
symbol:DET_0391 "ATP-dependent metalloprotease FtsH"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:LEIIAMR MEROPS:M41.021
RefSeq:YP_181136.1 ProteinModelPortal:Q3Z9G3 SMR:Q3Z9G3
STRING:Q3Z9G3 GeneID:3230280 KEGG:det:DET0391 PATRIC:21607849
ProtClustDB:CLSK837509 BioCyc:DETH243164:GJNF-391-MONOMER
Uniprot:Q3Z9G3
Length = 608
Score = 636 (228.9 bits), Expect = 3.0e-62, P = 3.0e-62
Identities = 163/399 (40%), Positives = 230/399 (57%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKA+AGEAGV FFSIS S+FVE++VGVGASRVR L+ +AK NAP ++FIDE+DAVG
Sbjct: 205 KTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFDQAKKNAPCIIFIDEIDAVG 264
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
R+RG G G ER+ TLNQ+LV +DGF+ +VI IA+TNRPDILDPAL+RPGRFDR++
Sbjct: 265 RQRGAGLGGGHDEREQTLNQILVEMDGFDTDTSVIVIAATNRPDILDPALLRPGRFDRRV 324
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
+ KP + GR ILK+HA+ KP+AD V+ +A T G GA+LAN++ AAI R R
Sbjct: 325 VLDKPDITGREAILKIHAKGKPLADTVNLENLAKQTVGFSGADLANLLNEAAILAARKNR 384
Query: 622 TEITTDDLLQAAQIEERGMLDRKERSSETWRQV-AINEAAMAVVAVNFPDLKNIEFVTIA 680
+ T+DL ++ G + R S ++V A +E +V + ++I
Sbjct: 385 KVVETEDLEESIDRVIAGPERKSRRISTQEKEVTAYHETGHGLVLRLVQGADPVHKISIV 444
Query: 681 PRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETA 740
R G LG+ R + ++ +++R + LA A+EL E LST ++
Sbjct: 445 AR-GMTLGHTRQLPNEDRY---LMTRSQFKAMMAGLLAGYVAEELTFKE--LSTGASDDL 498
Query: 741 DNARSAARTFVLG-GLSDK----HFGLSN--FWVADRINE-----------IDTEALRIL 782
A A V G+SDK FG ++ I+E ID E ++
Sbjct: 499 RRATDIAHKMVTSYGMSDKLGPRTFGNKEEMVFLGREISEQKDYGEKVADMIDEEVRGLI 558
Query: 783 NLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHL 821
+++AK IL N+N L + +L EK++L E +L
Sbjct: 559 EEAHQKAKTILTENKNRLKFIAEKLFEKETLEGAELENL 597
>TIGR_CMR|CPS_3452 [details] [associations]
symbol:CPS_3452 "ATP-dependent metalloprotease FtsH"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 OMA:RSIIDQC
RefSeq:YP_270126.1 ProteinModelPortal:Q47YJ4 SMR:Q47YJ4
STRING:Q47YJ4 GeneID:3519317 KEGG:cps:CPS_3452 PATRIC:21469851
BioCyc:CPSY167879:GI48-3480-MONOMER Uniprot:Q47YJ4
Length = 660
Score = 635 (228.6 bits), Expect = 3.8e-62, P = 3.8e-62
Identities = 159/394 (40%), Positives = 240/394 (60%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKA+AGEA V FF+IS S FVE++VGVGASRVR ++++AK AP ++FIDE+DAVG
Sbjct: 200 KTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVG 259
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
R+RG G G ER+ TLNQ+LV +DGFEG VI IA+TNRPD+LDPAL+RPGRFDR++
Sbjct: 260 RQRGAGMGGGHDEREQTLNQMLVEMDGFEGNEGVIVIAATNRPDVLDPALLRPGRFDRQV 319
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
+ P + GR +ILKVH RK P+ DDV +A T G GA+LAN+V AA+ R R
Sbjct: 320 TVGLPDIRGREQILKVHMRKVPLGDDVKAEVIARGTPGFSGADLANLVNEAALCAARTAR 379
Query: 622 TEITTDDLLQAAQIEERGMLDRKERS---SETWRQV-AINEAAMAVVAVNFPDLKNIEFV 677
++ + AA+ ++ M+ + +S SE+ R++ A +EA A++ PD + V
Sbjct: 380 RVVSMKEF-DAAK--DKIMMGSERKSMVMSESEREMTAYHEAGHAIIGRLVPDHDPVYKV 436
Query: 678 TIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWA 737
+I PR GR LG + +F S+Q L +I+ R A+E+ G ++ST +
Sbjct: 437 SIIPR-GRALGVTMYLPEQDRFSH---SKQHLESNISSLYGGRVAEEVIYGSDKVSTGAS 492
Query: 738 ETADNARSAARTFVLG-GLSDK-------------HFGLSN---FWVADRINE-IDTEAL 779
+ A + AR V GLS+K G ++ ++D + ID E
Sbjct: 493 NDIERATNIARKMVTQWGLSEKMGPMLFAEEEGEVFLGRTSAKSLHMSDETAKTIDEEIK 552
Query: 780 RILNLCYERAKEILQRNRNLLDAVVNELVEKKSL 813
+++ Y+RA+++++ N ++L A+ + L++ +++
Sbjct: 553 SVISRNYQRAEDLIKANMDVLHAMKDCLMKYETI 586
>CGD|CAL0004443 [details] [associations]
symbol:orf19.2057 species:5476 "Candida albicans" [GO:0005745
"m-AAA complex" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 CGD:CAL0004443 GO:GO:0016021
GO:GO:0005524 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 EMBL:AACQ01000031 EMBL:AACQ01000030
MEROPS:M41.003 RefSeq:XP_719505.1 RefSeq:XP_719629.1
ProteinModelPortal:Q5AD10 SMR:Q5AD10 GeneID:3638753 GeneID:3638884
KEGG:cal:CaO19.2057 KEGG:cal:CaO19.9604 Uniprot:Q5AD10
Length = 846
Score = 586 (211.3 bits), Expect = 4.4e-61, Sum P(3) = 4.4e-61
Identities = 153/433 (35%), Positives = 244/433 (56%)
Query: 415 VKF---SDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVG 471
VKF + Y + G + KTLLAKA AGEAGV F+S+S S+FVE++VG
Sbjct: 389 VKFLQNPEKYEKLGAKIPRGAILSGPPGTGKTLLAKATAGEAGVPFYSVSGSEFVEMFVG 448
Query: 472 VGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQ-ERDATLNQLLVCLDGFE 530
VGASRVR L++ A++NAPS+VF+DE+DA+G++R +G ER+ TLNQLLV +DGF+
Sbjct: 449 VGASRVRDLFKTARENAPSIVFVDEIDAIGKQRSKGNATGANDERETTLNQLLVEMDGFD 508
Query: 531 GRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDY 590
+V+ +A TNRPDILD AL+RPGRFDR + I P L+GR EI VH +K + D+D
Sbjct: 509 TSDHVVVLAGTNRPDILDRALMRPGRFDRHVHIDNPELLGRKEIFDVHLQKITLQKDIDP 568
Query: 591 -LA--VASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER- 646
L+ +A++T G GA++AN+ AA+ R E T + A G +++K +
Sbjct: 569 DLSGRLAALTPGFSGADIANVCNEAALIAARYN-AEFVTLRHFELAIERVIGGVEKKSKL 627
Query: 647 -SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLS 705
+ E + VA +EA A+ + V+I PR LGY + ++ + ++S
Sbjct: 628 LNPEEQKIVAYHEAGHAICGWYLKYAHPLLKVSIIPRGQGALGYAQ----YLPPDQYLMS 683
Query: 706 RQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSA---ARTFVLG-GLSDKHFG 761
L D + + L R ++EL +++ + D+ + A++ VL G+S K G
Sbjct: 684 TLQLYDRMIMTLGGRVSEEL-----HFASVTSGAHDDFKKVTGIAQSMVLRFGMS-KTVG 737
Query: 762 LSNFW-----------VADRINEI-DTEALRILNLCYERAKEILQRNRNLLDAVVNELVE 809
+ N++ +D + I D+E RI++ CY++ K++L ++ V EL++
Sbjct: 738 MVNYYDTRSQDDLTKPFSDETSRIIDSEVQRIVSDCYQKCKQLLTEKSKEVELVAQELLK 797
Query: 810 KKSLTKQEFFHLV 822
K+ +T+++ L+
Sbjct: 798 KEFITREDMIRLL 810
Score = 37 (18.1 bits), Expect = 4.4e-61, Sum P(3) = 4.4e-61
Identities = 5/15 (33%), Positives = 12/15 (80%)
Query: 282 LQKYEESLQDARDNY 296
++ +E +L++A+D Y
Sbjct: 286 VESFERNLREAQDKY 300
Score = 37 (18.1 bits), Expect = 4.4e-61, Sum P(3) = 4.4e-61
Identities = 6/21 (28%), Positives = 12/21 (57%)
Query: 36 PFSCKNQNFNPQNEDRNKNQN 56
PF NP+ +D++ ++N
Sbjct: 165 PFGMFFNKANPKQDDKDSSKN 185
>UNIPROTKB|Q9KU86 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000910 "cytokinesis" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241 HSSP:P28691
KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299 RefSeq:NP_230286.1
ProteinModelPortal:Q9KU86 SMR:Q9KU86 DNASU:2615425 GeneID:2615425
KEGG:vch:VC0637 PATRIC:20080383 ProtClustDB:CLSK874054
Uniprot:Q9KU86
Length = 651
Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
Identities = 160/394 (40%), Positives = 236/394 (59%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKA+AGEA V FF+IS S FVE++VGVGASRVR ++++AK +P ++FIDE+DAVG
Sbjct: 202 KTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEIDAVG 261
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
R+RG G G ER+ TLNQ+LV +DGFEG +I IA+TNRPD+LDPAL+RPGRFDR++
Sbjct: 262 RQRGAGVGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQV 321
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
+ P + GR +ILKVH RK P+A+DV+ +A T G GA+LAN+V AA+ R +
Sbjct: 322 VVGLPDVRGREQILKVHMRKVPLANDVEPSLIARGTPGFSGADLANLVNEAALFAARGNK 381
Query: 622 TEITTDDLLQAAQIEERGMLDRKERS---SETWRQ-VAINEAAMAVVAVNFPDLKNIEFV 677
++ +++ +++ M+ + RS SE ++ A +EA AVV P+ + V
Sbjct: 382 RNVS---MVEFELAKDKIMMGAERRSMVMSEEIKESTAYHEAGHAVVGRLVPEHDPVYKV 438
Query: 678 TIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWA 737
+I PR GR LG V M + + M S+Q L I+ R A+EL G+ ++ST +
Sbjct: 439 SIIPR-GRALG-VTMYLPEQD-RVSM-SKQHLESMISSLYGGRLAEELIYGKEKVSTGAS 494
Query: 738 ETADNARSAARTFVLG-GLSDK-------------HFGLS----NFWVADRINEIDTEAL 779
+ A AR V G S+K G S D ID E
Sbjct: 495 NDIERATEIARKMVTQWGFSEKLGPMLYAEDEGEVFLGRSVTQTKHMSDDTAKLIDDEVR 554
Query: 780 RILNLCYERAKEILQRNRNLLDAVVNELVEKKSL 813
+I++ YERA++I+ N +++ A+ + L++ +++
Sbjct: 555 QIIDRNYERARQIIMDNMDIMHAMKDALMKYETI 588
>TIGR_CMR|VC_0637 [details] [associations]
symbol:VC_0637 "cell division protein FtsH" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0000910 "cytokinesis"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299
RefSeq:NP_230286.1 ProteinModelPortal:Q9KU86 SMR:Q9KU86
DNASU:2615425 GeneID:2615425 KEGG:vch:VC0637 PATRIC:20080383
ProtClustDB:CLSK874054 Uniprot:Q9KU86
Length = 651
Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
Identities = 160/394 (40%), Positives = 236/394 (59%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKA+AGEA V FF+IS S FVE++VGVGASRVR ++++AK +P ++FIDE+DAVG
Sbjct: 202 KTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEIDAVG 261
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
R+RG G G ER+ TLNQ+LV +DGFEG +I IA+TNRPD+LDPAL+RPGRFDR++
Sbjct: 262 RQRGAGVGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQV 321
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
+ P + GR +ILKVH RK P+A+DV+ +A T G GA+LAN+V AA+ R +
Sbjct: 322 VVGLPDVRGREQILKVHMRKVPLANDVEPSLIARGTPGFSGADLANLVNEAALFAARGNK 381
Query: 622 TEITTDDLLQAAQIEERGMLDRKERS---SETWRQ-VAINEAAMAVVAVNFPDLKNIEFV 677
++ +++ +++ M+ + RS SE ++ A +EA AVV P+ + V
Sbjct: 382 RNVS---MVEFELAKDKIMMGAERRSMVMSEEIKESTAYHEAGHAVVGRLVPEHDPVYKV 438
Query: 678 TIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWA 737
+I PR GR LG V M + + M S+Q L I+ R A+EL G+ ++ST +
Sbjct: 439 SIIPR-GRALG-VTMYLPEQD-RVSM-SKQHLESMISSLYGGRLAEELIYGKEKVSTGAS 494
Query: 738 ETADNARSAARTFVLG-GLSDK-------------HFGLS----NFWVADRINEIDTEAL 779
+ A AR V G S+K G S D ID E
Sbjct: 495 NDIERATEIARKMVTQWGFSEKLGPMLYAEDEGEVFLGRSVTQTKHMSDDTAKLIDDEVR 554
Query: 780 RILNLCYERAKEILQRNRNLLDAVVNELVEKKSL 813
+I++ YERA++I+ N +++ A+ + L++ +++
Sbjct: 555 QIIDRNYERARQIIMDNMDIMHAMKDALMKYETI 588
>TAIR|locus:2163736 [details] [associations]
symbol:FTSH11 "FTSH protease 11" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0016020 "membrane" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0010304 "PSII
associated light-harvesting complex II catabolic process"
evidence=TAS] [GO:0009408 "response to heat" evidence=IMP]
[GO:0009644 "response to high light intensity" evidence=IMP]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0019761
"glucosinolate biosynthetic process" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA] [GO:0009536
"plastid" evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005743 GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0004222 GO:GO:0009408 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0004176
EMBL:AB025622 HOGENOM:HOG000217276 GO:GO:0010304 EMBL:AY091086
EMBL:AY123027 IPI:IPI00537766 RefSeq:NP_568787.1 UniGene:At.7145
ProteinModelPortal:Q9FGM0 SMR:Q9FGM0 MEROPS:M41.018 PaxDb:Q9FGM0
PRIDE:Q9FGM0 EnsemblPlants:AT5G53170.1 GeneID:835398
KEGG:ath:AT5G53170 GeneFarm:4747 TAIR:At5g53170 InParanoid:Q9FGM0
OMA:DIMPEKN PhylomeDB:Q9FGM0 ProtClustDB:CLSN2690002
Genevestigator:Q9FGM0 Uniprot:Q9FGM0
Length = 806
Score = 622 (224.0 bits), Expect = 9.0e-61, P = 9.0e-61
Identities = 162/418 (38%), Positives = 235/418 (56%)
Query: 407 QYLERGVD-VKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQF 465
Q LE V+ +K + R G + KTLLAKA+AGEAGV FF + S+F
Sbjct: 372 QELEEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEF 431
Query: 466 VEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVC 525
E++VGVGA RVRSL+Q AK AP ++FIDE+DAVG R +G TL+QLLV
Sbjct: 432 EEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG----HTKKTLHQLLVE 487
Query: 526 LDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMA 585
+DGFE +I +A+TN PDILDPAL RPGRFDR I +P P + GR EIL+++ + KPM+
Sbjct: 488 MDGFEQNEGIIVMAATNLPDILDPALTRPGRFDRHIVVPSPDVRGREEILELYLQGKPMS 547
Query: 586 DDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKE 645
+DVD A+A T G GA+LAN+V +AAI +G +++++ L A G +RK
Sbjct: 548 EDVDVKAIARGTPGFNGADLANLVNIAAIKAAVEGAEKLSSEQLEFAKDRIVMGT-ERKT 606
Query: 646 R--SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGM 703
S ++ + A +E+ A+VA+N I TI PR G LG V + E
Sbjct: 607 MFVSEDSKKLTAYHESGHAIVALNTKGAHPIHKATIMPR-GSALGMVTQLPSN---DETS 662
Query: 704 LSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFVLG-GLSDKHFG- 761
+S++ LL + V + R A+EL G ++T + A A+ V G+S+ G
Sbjct: 663 VSKRQLLARLDVCMGGRVAEELIFGLDHITTGASSDLSQATELAQYMVSSCGMSEA-IGP 721
Query: 762 --LSNFWVADRINEIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQE 817
+ +D + ID E +++L YER K +L+R+ L + N L+E ++LT ++
Sbjct: 722 VHIKERPSSDMQSRIDAEVVKLLREAYERVKSLLKRHEKQLHTLANALLEYETLTAED 779
>UNIPROTKB|P0AAI3 [details] [associations]
symbol:ftsH species:83333 "Escherichia coli K-12"
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0006508
"proteolysis" evidence=IEA;IDA] [GO:0043273 "CTPase activity"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA;IDA]
[GO:0030145 "manganese ion binding" evidence=IDA] [GO:0016021
"integral to membrane" evidence=IEA;IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0008270 GO:GO:0006508 EMBL:U18997
GO:GO:0004222 GO:GO:0016887 GO:GO:0030145 GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0043273 EMBL:U01376
HOGENOM:HOG000217276 KO:K03798 EMBL:M83138 PIR:S35109
RefSeq:NP_417645.1 RefSeq:YP_491363.1 PDB:1LV7 PDBsum:1LV7
ProteinModelPortal:P0AAI3 SMR:P0AAI3 DIP:DIP-35828N IntAct:P0AAI3
MINT:MINT-1226643 MEROPS:M41.001 PaxDb:P0AAI3 PRIDE:P0AAI3
EnsemblBacteria:EBESCT00000000369 EnsemblBacteria:EBESCT00000000370
EnsemblBacteria:EBESCT00000017485 GeneID:12933986 GeneID:947690
KEGG:ecj:Y75_p3098 KEGG:eco:b3178 PATRIC:32121774 EchoBASE:EB1469
EcoGene:EG11506 OMA:RSIIDQC ProtClustDB:PRK10733
BioCyc:EcoCyc:EG11506-MONOMER BioCyc:ECOL316407:JW3145-MONOMER
BioCyc:MetaCyc:EG11506-MONOMER SABIO-RK:P0AAI3
EvolutionaryTrace:P0AAI3 Genevestigator:P0AAI3 Uniprot:P0AAI3
Length = 644
Score = 619 (223.0 bits), Expect = 1.9e-60, P = 1.9e-60
Identities = 156/419 (37%), Positives = 234/419 (55%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKA+AGEA V FF+IS S FVE++VGVGASRVR ++++AK AP ++FIDE+DAVG
Sbjct: 198 KTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVG 257
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
R+RG G G ER+ TLNQ+LV +DGFEG +I IA+TNRPD+LDPAL+RPGRFDR++
Sbjct: 258 RQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQV 317
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
+ P + GR +ILKVH R+ P+A D+D +A T G GA+LAN+V AA+ R +
Sbjct: 318 VVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNK 377
Query: 622 TEITTDDLLQAAQIEERGMLDRKERS---SETWRQ-VAINEAAMAVVAVNFPDLKNIEFV 677
++ +++ + +++ M+ + RS +E ++ A +EA A++ P+ + V
Sbjct: 378 RVVS---MVEFEKAKDKIMMGAERRSMVMTEAQKESTAYHEAGHAIIGRLVPEHDPVHKV 434
Query: 678 TIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWA 737
TI PR GR LG + SRQ L I+ R A+E+ G +ST +
Sbjct: 435 TIIPR-GRALGVTFFLPEGDAISA---SRQKLESQISTLYGGRLAEEIIYGPEHVSTGAS 490
Query: 738 ETADNARSAARTFVLG-GLSDKHFGLSNFWVADRINEIDTEALRILNLCYERAKEILQRN 796
A + AR V G S+K L A+ E+ L +AK +
Sbjct: 491 NDIKVATNLARNMVTQWGFSEK---LGPLLYAEEEGEV------FLGRSVAKAKHMSDET 541
Query: 797 RNLLDAVVNELVEKKSLTKQEFFHLVELHGSLEPMPPSIVDIRAAKHSEIQEIMTNQNV 855
++D V L+E+ ++ L + L M +++ +I ++M ++V
Sbjct: 542 ARIIDQEVKALIERNYNRARQL--LTDNMDILHAMKDALMKYETIDAPQIDDLMARRDV 598
>TIGR_CMR|GSU_1180 [details] [associations]
symbol:GSU_1180 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952233.1 ProteinModelPortal:Q74DY5 SMR:Q74DY5
GeneID:2686793 KEGG:gsu:GSU1180 PATRIC:22025134 OMA:VCQWGMS
ProtClustDB:CLSK828230 BioCyc:GSUL243231:GH27-1166-MONOMER
Uniprot:Q74DY5
Length = 617
Score = 609 (219.4 bits), Expect = 2.2e-59, P = 2.2e-59
Identities = 158/392 (40%), Positives = 221/392 (56%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+AVAGEA V F SISASQF+E++VGVGA RVR L+ AK +APS++FIDELDAVG
Sbjct: 221 KTLLARAVAGEADVTFLSISASQFIEMFVGVGAGRVRDLFATAKKSAPSIIFIDELDAVG 280
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
R RG G G ER+ TLNQLL +DGF+ VI +A+TNRPD+LDPAL+RPGRFDR +
Sbjct: 281 RSRGAGLGGGHDEREQTLNQLLSEMDGFDSHDEVIVMAATNRPDVLDPALLRPGRFDRHV 340
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
I +P R +IL VH RK P+ DVD +A T GM GA+L N+V AAI R+
Sbjct: 341 VIDRPDWRDREKILHVHTRKIPLDKDVDLAVIARGTPGMAGADLENLVNEAAILAARENA 400
Query: 622 TEITTDDLLQAAQIEERGMLDRKERSSETWRQV-AINEAAMAVVAVNFPDLKNIEFVTIA 680
+T + + +A G +RK +E +++ A +EA +VA P + VTI
Sbjct: 401 ATVTMEHMERAKDKVLMGG-ERKMFITEQEKRITAYHEAGHTIVAKLLPGTDPVHKVTII 459
Query: 681 PRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETA 740
PR G+ LG + + ++ + L++ ++V L R A+ G+ LST
Sbjct: 460 PR-GQALGVTQQLPEDDRYH---YPKSYLMNRLSVALGGRQAERAVFGD--LSTGAQNDL 513
Query: 741 DNARSAARTFVLG-GLSDKHFGLSNF-------WVADRINE-----------IDTEALRI 781
A V G+SDK G F ++ ++ E ID E I
Sbjct: 514 KMVNDLAEKMVCQWGMSDK-IGAMTFSRGEEHPFLGRKLAEEKTFSEQMAWLIDQEIAAI 572
Query: 782 LNLCYERAKEILQRNRNLLDAVVNELVEKKSL 813
+ ++A ++ NR LDA+V+ L+E+++L
Sbjct: 573 IKEAEQKADNVIANNRGKLDALVDALMEEETL 604
>TAIR|locus:2057386 [details] [associations]
symbol:ftsh4 "FTSH protease 4" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA;ISS]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=ISS] [GO:0016020
"membrane" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009536 "plastid" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0009536 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
GO:GO:0005743 GO:GO:0046872 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49
EMBL:AC004747 GO:GO:0004176 HOGENOM:HOG000217276 EMBL:AK220842
IPI:IPI00534293 PIR:T02610 RefSeq:NP_565616.1 UniGene:At.23415
ProteinModelPortal:O80983 SMR:O80983 STRING:O80983 MEROPS:M41.004
PaxDb:O80983 PRIDE:O80983 EnsemblPlants:AT2G26140.1 GeneID:817154
KEGG:ath:AT2G26140 GeneFarm:2508 TAIR:At2g26140 InParanoid:O80983
OMA:HTEGALP PhylomeDB:O80983 ProtClustDB:CLSN2688437
Genevestigator:O80983 Uniprot:O80983
Length = 717
Score = 577 (208.2 bits), Expect = 8.8e-59, Sum P(2) = 8.8e-59
Identities = 154/401 (38%), Positives = 223/401 (55%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KT+LA+A+AGEAGV FFS S S+F E++VGVGA RVR L+ AK +P ++FIDE+DA+G
Sbjct: 273 KTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKCSPCIIFIDEIDAIG 332
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
R Q TLNQ+LV LDGF+ +I +A+TN P+ LD ALVRPGRFDR I
Sbjct: 333 GSRN---PKDQQYMKMTLNQMLVELDGFKQNEGIIVVAATNFPESLDKALVRPGRFDRHI 389
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
+P P + GR +IL+ H K A+DVD + +A T G GA+LAN+V VAA+ DG
Sbjct: 390 VVPNPDVEGRRQILESHMSKVLKAEDVDLMIIARGTPGFSGADLANLVNVAALKAAMDGS 449
Query: 622 TEITTDDLLQAAQIEERGML--DRKER--SSETWRQVAINEAAMAVVAVNFPDLKNIEFV 677
++T DL A ++R M+ +RK S E+ + A +E A+VA++ +
Sbjct: 450 KDVTMSDLEFA---KDRIMMGSERKSAVISDESRKLTAFHEGGHALVAIHTEGALPVHKA 506
Query: 678 TIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWA 737
TI PR G LG V D E +SR+ +L + V + R A+EL GE ++++ +
Sbjct: 507 TIVPR-GMALGMVSQLPDK---DETSISRKQMLARLDVCMGGRVAEELIFGESEVTSGAS 562
Query: 738 ETADNARSAARTFVLG-GLSDKHFGLSNFWVADRINE--------IDTEALRILNLCYER 788
+ A AR V G+S K GL D I++E ++L Y
Sbjct: 563 SDLEQATKLARAMVTKFGMS-KEVGLVAHNYDDNGKSMSTETRLLIESEVKQLLEKAYNN 621
Query: 789 AKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLV-ELHGSL 828
AK IL L A+ N L++ ++L+ ++ L+ +L+ L
Sbjct: 622 AKTILTVYNKELHALANALLQHETLSGKQIKELLTDLNSPL 662
Score = 44 (20.5 bits), Expect = 8.8e-59, Sum P(2) = 8.8e-59
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 449 VAGEAGVNFFSISASQFVEIYVGVGASRVR 478
V G G S+ ++F YVG A RVR
Sbjct: 36 VTGAVGGGGASLPRTRFQSSYVGSFARRVR 65
Score = 37 (18.1 bits), Expect = 4.8e-58, Sum P(2) = 4.8e-58
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 169 VLPSLDSNRKFWE--SWDELKID 189
V PS+DS+ KF + DE K +
Sbjct: 216 VQPSMDSSTKFSDVKGVDEAKAE 238
>TAIR|locus:2075581 [details] [associations]
symbol:ftsh7 "FTSH protease 7" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0009941 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49
GO:GO:0009535 EMBL:AL133292 GO:GO:0004176 HOGENOM:HOG000217276
KO:K03798 EMBL:AY099737 EMBL:BT000368 IPI:IPI00522102 PIR:T45642
RefSeq:NP_566889.1 UniGene:At.43767 ProteinModelPortal:Q9SD67
SMR:Q9SD67 MEROPS:M41.A04 PaxDb:Q9SD67 PRIDE:Q9SD67
EnsemblPlants:AT3G47060.1 GeneID:823859 KEGG:ath:AT3G47060
GeneFarm:2514 TAIR:At3g47060 InParanoid:Q9SD67 OMA:SNQVQKV
PhylomeDB:Q9SD67 ProtClustDB:CLSN2689036 Genevestigator:Q9SD67
Uniprot:Q9SD67
Length = 802
Score = 563 (203.2 bits), Expect = 2.7e-57, Sum P(2) = 2.7e-57
Identities = 141/335 (42%), Positives = 190/335 (56%)
Query: 409 LERGVD-VKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVE 467
LE V+ ++ + Y R G R KTLLAKAVAGEA V F S SAS+FVE
Sbjct: 337 LEEIVEFLRNPEKYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVE 396
Query: 468 IYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRER-GLIKGSGGQERDATLNQLLVCL 526
+YVG+GASRVR L+ AK APS++FIDE+DAV + R G + ER+ TLNQLL +
Sbjct: 397 LYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRMGSNDEREQTLNQLLTEM 456
Query: 527 DGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKK--PM 584
DGF+ VI + +TNR D+LDPAL RPGRFDR + + P IGR IL+VH KK P+
Sbjct: 457 DGFDSNSAVIVLGATNRADVLDPALRRPGRFDRVVTVETPDKIGRESILRVHVSKKELPL 516
Query: 585 ADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRK 644
DDV+ ++ASMT G GA+LAN+V AA+ R +T + D +QA + G+ +
Sbjct: 517 GDDVNLGSIASMTTGFTGADLANLVNEAALLAGRKNKTNVEKIDFIQAVERSIAGIEKKS 576
Query: 645 ERSSETWRQV-AINEAAMAVVAVNFPDL----KNIEFVTIAPRAGRELGYVRMKMDHMKF 699
R + V A +EA AVV +L +E ++I PR G LG+ +
Sbjct: 577 ARLKGNEKAVVARHEAGHAVVGTAVANLLTGQPRVEKLSILPRTGGALGFTYIPPTSED- 635
Query: 700 KEGMLSRQSLLDHITVQLAPRAADELWCGEGQLST 734
+L LL + L RAA+E+ G++ST
Sbjct: 636 -RYLLFIDELLGRLVTLLGGRAAEEV-VYSGRIST 668
Score = 45 (20.9 bits), Expect = 2.7e-57, Sum P(2) = 2.7e-57
Identities = 16/68 (23%), Positives = 34/68 (50%)
Query: 753 GGLSDKHFGLSNFWVADR---INEIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVE 809
GG+ D G S W D+ ++ + E +L + A +++ N ++L+ + +L E
Sbjct: 705 GGIDDS--GGSP-WGRDQGKLVDLVQKEVTILLQSALDVALSVVRANPDVLEGLGAQLEE 761
Query: 810 KKSLTKQE 817
K+ + +E
Sbjct: 762 KEKVEGEE 769
>TIGR_CMR|CJE_1259 [details] [associations]
symbol:CJE_1259 "cell division protein FtsH"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
OMA:RARASMP RefSeq:YP_179247.1 ProteinModelPortal:Q5HTY8 SMR:Q5HTY8
STRING:Q5HTY8 GeneID:3231766 KEGG:cjr:CJE1259 PATRIC:20044314
ProtClustDB:CLSK872348 BioCyc:CJEJ195099:GJC0-1285-MONOMER
Uniprot:Q5HTY8
Length = 645
Score = 589 (212.4 bits), Expect = 2.8e-57, P = 2.8e-57
Identities = 150/455 (32%), Positives = 248/455 (54%)
Query: 413 VD-VKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVG 471
VD +K+ + Y + G + KTLLAKAVAGEA V FFS+S S F+E++VG
Sbjct: 194 VDFLKYPERYIKLGAKIPKGLLLVGPPGTGKTLLAKAVAGEADVPFFSVSGSSFIEMFVG 253
Query: 472 VGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQ-ERDATLNQLLVCLDGFE 530
VGASRVR L++ AK AP++VFIDE+DA+G+ R GG ER+ TLNQLL +DGF
Sbjct: 254 VGASRVRDLFENAKKEAPAIVFIDEIDAIGKSRAASGMMGGNDEREQTLNQLLAEMDGFG 313
Query: 531 GRGN-VITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVD 589
+ VI +A+TNRP++LD AL+RPGRFDR++ + KP GR +ILKVH + ++ V
Sbjct: 314 TESSPVIVLAATNRPEVLDAALLRPGRFDRQVLVDKPDFKGRCDILKVHMKDVKISPKVK 373
Query: 590 YLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSE 649
+A +T G+ GA+LANI+ AA+ RD + + +DL++A + G+ + R +E
Sbjct: 374 VEDIARLTAGLAGADLANIINEAALLAGRDSKKYVEQNDLVEAVERAIAGLEKKSRRINE 433
Query: 650 TWRQ-VAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQS 708
++ V +E A++A K + V++ PR LGY + KF ++ +
Sbjct: 434 KEKKIVTYHECGHALIAETTKGAKRVSKVSVIPRGLAALGYTLNTPEENKF---LMQKHE 490
Query: 709 LLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFV-LGGLSD---------- 757
L+ + V L RAA+E++ GE +ST + + A + + + G+S+
Sbjct: 491 LIAEVDVLLGGRAAEEVFIGE--ISTGASNDLERATDIIKAMISMYGMSEIAGLMVLEKQ 548
Query: 758 KHFGLSNFWVADRINEIDTEAL-----RILNLCYERAKEILQRNRNLLDAVVNELVEKKS 812
++ LS +E E+L + L+ Y+ K+ L + ++ +V L E+++
Sbjct: 549 RNTFLSGGQTIKDYSEKMAESLDDYVKKTLDERYKDVKDTLNTYKGAIETMVAALYEEET 608
Query: 813 LTKQEFFHLVELHGSLEPMPPSIVDIRAAKHSEIQ 847
+ + +++ +P + ++ K +E++
Sbjct: 609 IEGNKVREIIKEFEDQNSLPTRLQELEEVK-TEVK 642
>TAIR|locus:2154568 [details] [associations]
symbol:ftsh9 "FTSH protease 9" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0009941 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 EMBL:AB016885
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798
ProtClustDB:CLSN2689036 EMBL:AY059856 IPI:IPI00541670
RefSeq:NP_568892.1 UniGene:At.7754 ProteinModelPortal:Q9FIM2
SMR:Q9FIM2 STRING:Q9FIM2 MEROPS:M41.A03 PaxDb:Q9FIM2 PRIDE:Q9FIM2
EnsemblPlants:AT5G58870.1 GeneID:836004 KEGG:ath:AT5G58870
GeneFarm:2516 TAIR:At5g58870 InParanoid:Q9FIM2 OMA:SSKRGEN
PhylomeDB:Q9FIM2 Genevestigator:Q9FIM2 Uniprot:Q9FIM2
Length = 806
Score = 563 (203.2 bits), Expect = 5.3e-57, Sum P(2) = 5.3e-57
Identities = 146/360 (40%), Positives = 198/360 (55%)
Query: 409 LERGVD-VKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVE 467
LE V+ +K D Y R G R KTLLAKAVAGE+ V F S SAS+FVE
Sbjct: 341 LEEIVEFLKNPDRYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGESDVPFISCSASEFVE 400
Query: 468 IYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRER-GLIKGSGGQERDATLNQLLVCL 526
+YVG+GASRVR L+ AK APS++FIDE+DAV + R G + ER+ TLNQLL +
Sbjct: 401 LYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRMVSNDEREQTLNQLLTEM 460
Query: 527 DGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKK--PM 584
DGF+ VI + +TNR D+LDPAL RPGRFDR + + P +GR ILKVH KK P+
Sbjct: 461 DGFDSSSAVIVLGATNRADVLDPALRRPGRFDRVVTVESPDKVGRESILKVHVSKKELPL 520
Query: 585 ADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRK 644
DDV+ ++ASMT G GA+LAN+V AA+ R + + D + A + G+ +
Sbjct: 521 GDDVNLASIASMTTGFTGADLANLVNEAALLAGRKSKMTVDKIDFIHAVERSIAGIEKKT 580
Query: 645 ERSSETWRQV-AINEAAMAVVAVNFPDL----KNIEFVTIAPRAGRELGYVRMKMDHMKF 699
R + + V A +EA AVV L +E ++I PR+G LG+ + H
Sbjct: 581 ARLKGSEKAVVARHEAGHAVVGTAVASLLSGQSRVEKLSILPRSGGALGFTYIPPTHED- 639
Query: 700 KEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFVLG-GLSDK 758
+L L + L RAA+E+ G++ST + A A V GL++K
Sbjct: 640 -RYLLFIDELHGRLVTLLGGRAAEEV-VYSGRISTGALDDIRRATDMAYKAVAEYGLNEK 697
Score = 43 (20.2 bits), Expect = 5.3e-57, Sum P(2) = 5.3e-57
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 129 IFSLKDEGKLKHVIKSPSG-SLRQKAEPVL 157
+F LKD+G L+ S S L + +E +L
Sbjct: 201 LFKLKDDGNLQESETSSSSIKLSESSETML 230
>DICTYBASE|DDB_G0284249 [details] [associations]
symbol:DDB_G0284249 "peptidase M41, FtsH
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006461 "protein complex assembly" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0044351 "macropinocytosis" evidence=RCA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284249 GO:GO:0016021 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0006461 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:AAFI02000064 RefSeq:XP_638674.1 ProteinModelPortal:Q54PX1
SMR:Q54PX1 MEROPS:M41.A17 EnsemblProtists:DDB0229917 GeneID:8624503
KEGG:ddi:DDB_G0284249 InParanoid:Q54PX1 OMA:VSIYGMN
ProtClustDB:CLSZ2846729 Uniprot:Q54PX1
Length = 764
Score = 559 (201.8 bits), Expect = 8.8e-57, Sum P(2) = 8.8e-57
Identities = 153/407 (37%), Positives = 226/407 (55%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTL+AKA AGEA V F+S S S FVE++VGVG SRVR L+++A+ NAP +VFIDE+DAVG
Sbjct: 348 KTLIAKATAGEANVPFYSTSGSDFVEMFVGVGPSRVRDLFEQARKNAPCIVFIDEIDAVG 407
Query: 502 RERGLIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRK 560
R RG SG ER+ TLNQLLV +DGF+ NV+ +A+TNRPDILD AL+RPGRFDR+
Sbjct: 408 RARGKGGFSGSNDERENTLNQLLVEMDGFKPLKNVVVLAATNRPDILDKALLRPGRFDRQ 467
Query: 561 IFIPKPGLIGRMEILKVHARKKPMADDVDYLA-VASMTDGMVGAELANIVEVAAINMMRD 619
I I P L R EI +VH + ++Y ++ +T G GA++AN+ AA+ R
Sbjct: 468 ITIDNPDLKSREEIFRVHLAALLLDKSINYAERLSKLTPGFSGADIANVCNEAALIAARR 527
Query: 620 GRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVAVNFPDLKNIEFV 677
EI T + AA G L++K + S R VA +EA AVV+ + V
Sbjct: 528 -HAEIITLEHFDAAVDRVIGGLEKKNKVLSPTEKRTVAYHEAGHAVVSWFLKHCHPLLKV 586
Query: 678 TIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWA 737
+I PR LGY + ++ ++ + +++ + D + + L R A++L G ++T
Sbjct: 587 SIVPRGVAALGYAQ----YLPKEQFLQNQEQIFDMMCMALGGRVAEQLTFGT--ITTGAQ 640
Query: 738 ETADNARSAARTFV-LGGLSDK---------HFG--LSNFWVADRINEIDTEALRILNLC 785
+ + A + V + G+++K G L+ + + +D E ++L
Sbjct: 641 DDLEKITKMAYSQVSIYGMNEKIGPLSYQKGQDGSDLTKPYSEETAEVMDEEVRKLLKSA 700
Query: 786 YERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLVELHGSLEPMP 832
Y+R ++LQ +R L +V N L+EK E H E+ L P P
Sbjct: 701 YDRTTQVLQEHREGLISVANLLLEK------EVIHFEEVEAVLGPRP 741
Score = 43 (20.2 bits), Expect = 8.8e-57, Sum P(2) = 8.8e-57
Identities = 11/21 (52%), Positives = 12/21 (57%)
Query: 37 FSCKNQNFNPQNEDRNKNQNS 57
FS N F QNE N+NQ S
Sbjct: 42 FSSNNNLFKNQNE--NENQTS 60
Score = 39 (18.8 bits), Expect = 2.3e-56, Sum P(2) = 2.3e-56
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 40 KNQNFNPQNEDRNKNQNSK 58
K N N N+D N+++K
Sbjct: 109 KGNNNNKDNKDNKDNKDNK 127
>POMBASE|SPBC543.09 [details] [associations]
symbol:yta12 "mitochondrial m-AAA protease Yta12
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005745 "m-AAA complex" evidence=ISO] [GO:0006091 "generation
of precursor metabolites and energy" evidence=NAS] [GO:0006465
"signal peptide processing" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0008237 "metallopeptidase activity" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0033108 "mitochondrial respiratory chain complex
assembly" evidence=ISO] [GO:0045041 "protein import into
mitochondrial intermembrane space" evidence=ISO] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC543.09
GO:GO:0005524 GO:GO:0046872 EMBL:CU329671 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0004222 GO:GO:0006091
GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
KO:K08956 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 OMA:LYRFVTT
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0045041 GO:GO:0006465
GO:GO:0033108 RefSeq:NP_596797.1 ProteinModelPortal:Q9HGM3
SMR:Q9HGM3 STRING:Q9HGM3 MEROPS:M41.A14 EnsemblFungi:SPBC543.09.1
GeneID:2541079 KEGG:spo:SPBC543.09 NextBio:20802192 Uniprot:Q9HGM3
Length = 773
Score = 577 (208.2 bits), Expect = 5.3e-56, P = 5.3e-56
Identities = 159/453 (35%), Positives = 242/453 (53%)
Query: 415 VKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGA 474
+K Y R G + KTLLAKA AGEA V F S+S S+F+E++VGVG
Sbjct: 315 LKNPKFYERLGAKIPRGAILSGPPGTGKTLLAKATAGEANVPFLSVSGSEFLEMFVGVGP 374
Query: 475 SRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQ-ERDATLNQLLVCLDGFEGRG 533
SRVR L+ A+ NAP ++FIDE+DA+G+ RG G ER++TLNQLLV +DGF
Sbjct: 375 SRVRDLFATARKNAPCIIFIDEIDAIGKARGRGGQFGSNDERESTLNQLLVEMDGFTSSE 434
Query: 534 NVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLA- 592
+++ A TNRPD+LDPAL+RPGRFDR+I I +P + GR +I KVH + AD++D +A
Sbjct: 435 HIVVFAGTNRPDVLDPALLRPGRFDRQITIDRPDIGGREQIFKVHLKHIKAADNIDLIAK 494
Query: 593 -VASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SSE 649
+A +T G GA++ N+ A+ R E+ QA + G L++K R S E
Sbjct: 495 RLAVLTSGFTGADIMNVCNEGALIAARSNSNEVQMVHFEQAIERVTAG-LEKKSRVLSPE 553
Query: 650 TWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSL 709
VA +EA AV + + V+I PRA + LGY ++ + ++SR +
Sbjct: 554 EKNTVAHHEAGHAVAGWFMEYVDPLLKVSIIPRA-QALGYA----SYLPKDQYLMSRGQI 608
Query: 710 LDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFVLG-GLSDKHFGLSNFWVA 768
LD + + LA R ++E++ G ++++ ++ A+ +V G+S G + +
Sbjct: 609 LDQMGMALAGRVSEEIFFGPEKITSGASDDFQKVTRMAQAYVTQYGMSPT-VGTIAYPID 667
Query: 769 DR------INE-----IDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQE 817
R +E ID E +++ YER K++L ++ L+ + L++K+ +T E
Sbjct: 668 TRETVQKPFSEATAQMIDEEIRKLVKHAYERTKKLLLEHKQGLENIAQRLLQKEVITYNE 727
Query: 818 FFHLVELHGSLEPMPPSIVDIRAAKHSEIQEIM 850
VE L P P A KH I E+M
Sbjct: 728 ----VET--ILGPRP------YAYKHLNISELM 748
>SGD|S000004695 [details] [associations]
symbol:YTA12 "Component of the mitochondrial inner membrane
m-AAA protease" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS;IDA;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0006508 "proteolysis" evidence=IEA;IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;IDA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA;IMP] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006461 "protein complex assembly" evidence=IMP]
[GO:0006465 "signal peptide processing" evidence=IMP] [GO:0005745
"m-AAA complex" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0031966 "mitochondrial membrane" evidence=IEA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 SGD:S000004695 EMBL:U09358 GO:GO:0005524
GO:GO:0006461 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0008237 GO:GO:0004222 GO:GO:0016887 EMBL:BK006946
GO:GO:0030163 EMBL:Z49259 eggNOG:COG0465
GeneTree:ENSGT00530000063070 KO:K08956 TIGRFAMs:TIGR01241
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0097002 GO:GO:0045041
GO:GO:0006465 EMBL:X81068 EMBL:AY693099 PIR:S54465
RefSeq:NP_013807.1 ProteinModelPortal:P40341 SMR:P40341
DIP:DIP-889N IntAct:P40341 MINT:MINT-596896 STRING:P40341
MEROPS:M41.003 PaxDb:P40341 PeptideAtlas:P40341
EnsemblFungi:YMR089C GeneID:855114 KEGG:sce:YMR089C CYGD:YMR089c
OMA:NFSGAND NextBio:978455 Genevestigator:P40341 GermOnline:YMR089C
Uniprot:P40341
Length = 825
Score = 568 (205.0 bits), Expect = 7.9e-55, P = 7.9e-55
Identities = 156/439 (35%), Positives = 239/439 (54%)
Query: 415 VKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGA 474
+K Y + G + KTLLAKA AGEAGV F+ +S S+FVE++VGVGA
Sbjct: 367 LKEPSRYEKMGAKIPRGAILSGPPGTGKTLLAKATAGEAGVPFYFVSGSEFVEMFVGVGA 426
Query: 475 SRVRSLYQEAKDNAPSVVFIDELDAVG--RERGLIKGSGGQERDATLNQLLVCLDGFEGR 532
+RVR L++ A++NAPS+VFIDE+DA+G R++G G+ ER+ TLNQ+LV +DGF
Sbjct: 427 ARVRDLFKTARENAPSIVFIDEIDAIGKARQKGNFSGAN-DERENTLNQMLVEMDGFTPA 485
Query: 533 GNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLA 592
+V+ +A TNRPDILD AL+RPGRFDR I I KP L GR I VH +A ++ L
Sbjct: 486 DHVVVLAGTNRPDILDKALLRPGRFDRHINIDKPELEGRKAIFAVHLHHLKLAGEIFDLK 545
Query: 593 --VASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SS 648
+A++T G GA++AN+ AA+ R + + QA + G ++RK + S
Sbjct: 546 NRLAALTPGFSGADIANVCNEAALIAARSDEDAVKLNHFEQAIE-RVIGGVERKSKLLSP 604
Query: 649 ETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQS 708
E + VA +EA AV + V+I PR LGY + + F +L+ Q
Sbjct: 605 EEKKVVAYHEAGHAVCGWYLKYADPLLKVSIIPRGQGALGYAQYLPGDI-F---LLTEQQ 660
Query: 709 LLDHITVQLAPRAADELWCGEGQLSTIWAETADNAR---SAARTFVLG-GLSDKHFGLSN 764
L D +T+ L R ++EL ++ + +D+ + S A V G+SDK G N
Sbjct: 661 LKDRMTMSLGGRVSEEL-----HFPSVTSGASDDFKKVTSMATAMVTELGMSDK-IGWVN 714
Query: 765 FW----------VADRINEI-DTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSL 813
+ +D +I D+E RI+ C++R ++L+ ++ + L++K+ L
Sbjct: 715 YQKRDDSDLTKPFSDETGDIIDSEVYRIVQECHDRCTKLLKEKAEDVEKIAQVLLKKEVL 774
Query: 814 TKQEFFHLVELHGSLEPMP 832
T+++ +++L G P P
Sbjct: 775 TRED---MIDLLGK-RPFP 789
>POMBASE|SPCC965.04c [details] [associations]
symbol:SPCC965.04c "mitochondrial inner membrane i-AAA
protease complex subunit Yme1 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0004176 "ATP-dependent peptidase
activity" evidence=ISO] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO] [GO:0007005
"mitochondrion organization" evidence=ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0031942 "i-AAA complex" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC965.04c GO:GO:0016021 GO:GO:0005524 EMBL:CU329672
GO:GO:0046872 GO:GO:0004222 GO:GO:0006515 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0007005 GO:GO:0004176
HOGENOM:HOG000217276 MEROPS:M41.004 GO:GO:0031942 PIR:T41657
RefSeq:NP_588514.1 ProteinModelPortal:O59824 SMR:O59824
STRING:O59824 EnsemblFungi:SPCC965.04c.1 GeneID:2538746
KEGG:spo:SPCC965.04c KO:K08955 OMA:LANANMS OrthoDB:EOG4FR40W
NextBio:20799930 Uniprot:O59824
Length = 709
Score = 544 (196.6 bits), Expect = 1.4e-54, Sum P(2) = 1.4e-54
Identities = 146/396 (36%), Positives = 223/396 (56%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KT+LA+AVAGEA V FF +S SQF E+YVGVGA RVR L+ A+ APS++FIDELDA+G
Sbjct: 313 KTMLARAVAGEANVPFFFMSGSQFDEMYVGVGAKRVRELFAAARKQAPSIIFIDELDAIG 372
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGN----VITIASTNRPDILDPALVRPGRF 557
++R + ++ TLNQLLV LDGF + V+ I +TN P+ LDPAL RPGRF
Sbjct: 373 QKRNARDAAHMRQ---TLNQLLVDLDGFSKNEDLAHPVVFIGATNFPESLDPALTRPGRF 429
Query: 558 DRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMM 617
DR I +P P + GR+ IL H R P+ DVD +A T G GA+LAN++ AA+
Sbjct: 430 DRHIHVPLPDVRGRLAILLQHTRHVPLGKDVDLSIIARGTSGFAGADLANLINQAAVYAS 489
Query: 618 RDGRTEITTDDLLQAAQIEERGMLDRKERSS----ETWRQVAINEAAMAVVAVNFPDLKN 673
++ T ++ DL + ++R ++ + +S+ E A +E A+VA+ +
Sbjct: 490 KNLSTAVSMRDLEWS---KDRILMGAERKSAFITPENKLMTAYHEGGHALVALFTKNAMR 546
Query: 674 IEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLS 733
TI PR G LG + + + M K+ +R+ L + V + RAA+EL G+ +++
Sbjct: 547 PYKATIMPR-GSSLG-MTISLPDMD-KDSW-TREEYLAMLDVTMGGRAAEELLYGKDKIT 602
Query: 734 TIWAETADNARSAARTFVLG-GLSDKHFGLSNFWVADRINE-----IDTEALRILNLCYE 787
+ D A AR V G+SD+ +S D ++ +++E +L YE
Sbjct: 603 SGAHNDIDKATQVARRMVTEFGMSDRIGPVSLEAEMDNLSPATRALVESEIKSLLEASYE 662
Query: 788 RAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLVE 823
R+ +L+ ++ LDA+ LV+ + LT +E +V+
Sbjct: 663 RSLSLLKSHKKELDALATALVDYEFLTAEEMNRVVK 698
Score = 37 (18.1 bits), Expect = 1.4e-54, Sum P(2) = 1.4e-54
Identities = 6/11 (54%), Positives = 10/11 (90%)
Query: 410 ERGVDVKFSDM 420
ER ++V+FSD+
Sbjct: 259 ERAINVRFSDV 269
>ASPGD|ASPL0000072959 [details] [associations]
symbol:AN4557 species:162425 "Emericella nidulans"
[GO:0097002 "mitochondrial inner boundary membrane" evidence=IEA]
[GO:0005745 "m-AAA complex" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0006461 "protein
complex assembly" evidence=IEA] [GO:0006465 "signal peptide
processing" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 HOGENOM:HOG000217277 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:LYRFVTT MEROPS:M41.002 OrthoDB:EOG4J14HG
EMBL:BN001303 EMBL:AACD01000078 RefSeq:XP_662161.1
ProteinModelPortal:Q5B4H3 SMR:Q5B4H3 STRING:Q5B4H3
EnsemblFungi:CADANIAT00005881 GeneID:2872358 KEGG:ani:AN4557.2
Uniprot:Q5B4H3
Length = 883
Score = 568 (205.0 bits), Expect = 1.6e-54, P = 1.6e-54
Identities = 144/428 (33%), Positives = 233/428 (54%)
Query: 415 VKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGA 474
+K + +++ G + KTLLAKA AGE+GV FFS+S S+FVE++VGVG
Sbjct: 421 LKSPERFQKLGAKIPRGAILSGPPGTGKTLLAKATAGESGVPFFSVSGSEFVEMFVGVGP 480
Query: 475 SRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQ-ERDATLNQLLVCLDGFEGRG 533
SRVR L+ A+ N P ++FIDE+DA+G+ R SGG ER++TLNQ+L +DGF
Sbjct: 481 SRVRDLFANARKNTPCIIFIDEIDAIGKSRSAKNFSGGNDERESTLNQILTEMDGFNTSD 540
Query: 534 NVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLA- 592
V+ +A TNRPD+LD AL+RPGRFDR I I +P + GR +I +VH +K +D+DYL
Sbjct: 541 QVVVLAGTNRPDVLDKALMRPGRFDRHISIDRPTMDGRKQIFRVHLKKIVTKEDMDYLTG 600
Query: 593 -VASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SSE 649
++++T G GA++AN V AA+ R+ +T +A + G L++K S E
Sbjct: 601 RLSALTPGFAGADIANCVNEAALVAARENAESVTMKHFERAIE-RVVGGLEKKSLVLSPE 659
Query: 650 TWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVR-MKMDHMKFKEGMLSRQS 708
R VA +EA A+ F + V+I PR LGY + + + + +++
Sbjct: 660 EKRTVAYHEAGHAICGWYFRWADPLLKVSIIPRGQGALGYAQYLPANGDTY---LMTANQ 716
Query: 709 LLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAAR--TFVLG--GLSDK----HF 760
++D + + L R ++EL T+ + +D+ R T ++ G+S K ++
Sbjct: 717 MMDRMAMTLGGRVSEEL-----HFDTVTSGASDDFNKVTRLATAMVTKFGMSPKLKYIYY 771
Query: 761 G------LSNFWVADRINEIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLT 814
L + + +ID E RI+N Y++ +++L + + V EL+ K+ L+
Sbjct: 772 EEDPSSQLHKPFSEETAKDIDIEVRRIVNEAYKQCRDLLTAKKKEVGLVAEELLAKEVLS 831
Query: 815 KQEFFHLV 822
+ + L+
Sbjct: 832 RDDMVRLL 839
>DICTYBASE|DDB_G0272120 [details] [associations]
symbol:rcaA "peptidase M41, FtsH domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0272120 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GenomeReviews:CM000151_GR GO:GO:0004222
EMBL:AAFI02000008 GO:GO:0030163 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 ProtClustDB:CLSZ2846729 RefSeq:XP_645267.1
ProteinModelPortal:Q75JS8 SMR:Q75JS8 STRING:Q75JS8
EnsemblProtists:DDB0185211 GeneID:8618433 KEGG:ddi:DDB_G0272120
InParanoid:Q75JS8 OMA:ERTIVAH Uniprot:Q75JS8
Length = 844
Score = 564 (203.6 bits), Expect = 3.0e-54, P = 3.0e-54
Identities = 151/420 (35%), Positives = 223/420 (53%)
Query: 415 VKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGA 474
+K Y++ G R KTLLAKA AGEAGVNF++IS S F+E++VGVG
Sbjct: 373 LKDPSRYKKLGARIPKGAILSGPPGTGKTLLAKATAGEAGVNFYTISGSDFIEMFVGVGP 432
Query: 475 SRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGN 534
SRVR L++EA+ N P +VFIDE+DAVGR R G ER+ TLNQLLV +DGF
Sbjct: 433 SRVRDLFKEARANTPCIVFIDEIDAVGRARSR-GGFHNDERENTLNQLLVEMDGFSSTSG 491
Query: 535 VITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLA-- 592
V+ A TNR D+LDPAL+RPGRFDR+I++ KP + GR +I VH + + +++ +A
Sbjct: 492 VVVFAGTNRSDVLDPALLRPGRFDRQIYVGKPDIKGRKDIFMVHLKNIKLDGEMEEIAKK 551
Query: 593 VASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SSET 650
+A++T G GA++AN+ A+ R T D +A + G L R+ R S E
Sbjct: 552 LATLTPGFSGADIANVCNEGALVAARKDATSANFDHFEEAIERVLVG-LKRENRVLSPEE 610
Query: 651 WRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLL 710
VA +EA AVV + V+I PR LG+ + + + + +R+ L
Sbjct: 611 RTIVAHHEAGHAVVGWFLEHTDPLLKVSIVPRGSGTLGFAQ----YQPKDQYLYTREQLF 666
Query: 711 DHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFVLG-GLSDKHFGLSNFWV-A 768
D I V L R A+ + ++ST + D A V+ G+S+K G+++F
Sbjct: 667 DRICVSLGGRIAESIIFD--RISTGAMDDLDKVTKMASASVVNYGMSEK-VGVASFRKEG 723
Query: 769 DRINE-----------IDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQE 817
D I ID E R++N Y + ++L + LL + L+EK+ + + +
Sbjct: 724 DDITVVKPYSQATARMIDEEIRRMVNDAYSKTTQLLHEKKELLIKLATILLEKEVIQRDD 783
>ASPGD|ASPL0000029469 [details] [associations]
symbol:AN5588 species:162425 "Emericella nidulans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006457 "protein
folding" evidence=IEA] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0031942 "i-AAA
complex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:SEFDEVY EnsemblFungi:CADANIAT00003489
Uniprot:C8VG17
Length = 784
Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
Identities = 159/437 (36%), Positives = 236/437 (54%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+AVAGEAGV FF +S S+F E+YVGVGA RVR L+ +A+ +P+++FIDELDA+G
Sbjct: 361 KTLLARAVAGEAGVPFFYMSGSEFDEVYVGVGAKRVRELFNQARSKSPAIIFIDELDAIG 420
Query: 502 RERGLIKGSGGQERDA-----TLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGR 556
+R ERDA TLNQLL LDGF VI +A+TN P++LD AL RPGR
Sbjct: 421 AKRN--------ERDAAYVKQTLNQLLTELDGFSQSTGVIILAATNYPELLDKALTRPGR 472
Query: 557 FDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINM 616
FDRK+ + P + GRM+ILK H + ++ DVD +A T G GA+L N+V AAI
Sbjct: 473 FDRKVVVDLPDVRGRMDILKHHMKNVQISTDVDVAVIARGTSGFSGADLENLVNQAAIFA 532
Query: 617 MRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQV-AINEAAMAVVAVNFPDLKNIE 675
R+ ++++T D A G R + + + A +EA A+VA P +
Sbjct: 533 SRNKQSKVTPKDFDYAKDKIIMGAEARSRIIQDKDKLLTAYHEAGHALVAYFSPSSMPLY 592
Query: 676 FVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSL--LDHITVQLAPRAADELWCGEGQLS 733
+TI PR G LG H + M+S+ + L I V + + A+EL GE +++
Sbjct: 593 KITIMPR-GMSLGST-----HFLPEMDMVSKNYVQYLSDIDVSMGGKVAEELIYGEDKVT 646
Query: 734 T-IWAETADNARSAARTFVLGGLSDKHFGLSNFWVADRIN-----EIDTEALRILNLCYE 787
+ I A+ A R+A G S K + + D ++ EI+ E R++ +
Sbjct: 647 SGISADLASATRTAFTLVTRFGYSKKLGNVDLYANYDSLSSETKQEIEAEVRRLVEEARQ 706
Query: 788 RAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLVELHG-SLEPMP-PSIVDIRAAKHSE 845
RA IL R+ L+ + L++ ++LTK+E + L G SL+ + P+ ++ +
Sbjct: 707 RATNILTERRHELELLTKALIKYETLTKEEMEKV--LRGESLDRLVVPADAPMKLPEPIS 764
Query: 846 IQEIMTNQNVTSIGSNA 862
+ NQ V G+ A
Sbjct: 765 ATNLSPNQGVEESGNRA 781
>TAIR|locus:2025052 [details] [associations]
symbol:ftsh10 "FTSH protease 10" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009536
"plastid" evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
EMBL:AC022464 ProtClustDB:CLSN2692039 EMBL:AY064138 EMBL:AY124808
EMBL:AK230173 IPI:IPI00520253 PIR:H86209 RefSeq:NP_172231.2
UniGene:At.23339 ProteinModelPortal:Q8VZI8 SMR:Q8VZI8 STRING:Q8VZI8
MEROPS:M41.023 PaxDb:Q8VZI8 PRIDE:Q8VZI8 EnsemblPlants:AT1G07510.1
GeneID:837265 KEGG:ath:AT1G07510 GeneFarm:2535 GeneFarm:2675
TAIR:At1g07510 InParanoid:Q8VZI8 OMA:YSEDTAM PhylomeDB:Q8VZI8
Genevestigator:Q8VZI8 Uniprot:Q8VZI8
Length = 813
Score = 541 (195.5 bits), Expect = 7.9e-54, Sum P(2) = 7.9e-54
Identities = 146/394 (37%), Positives = 223/394 (56%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKA AGE+ V F SIS S F+E++VGVG SRVR+L+QEA+ APS++FIDE+DA+G
Sbjct: 373 KTLLAKATAGESAVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDAIG 432
Query: 502 RERGLIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRK 560
R RG SGG ER++TLNQLLV +DGF V+ +A TNRPDILD AL+RPGRFDR+
Sbjct: 433 RARGRGGFSGGNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQ 492
Query: 561 IFIPKPGLIGRMEILKVHARKKPMADDVDYLA--VASMTDGMVGAELANIVEVAAINMMR 618
I I KP + GR +I +++ +K + + Y + +A++T G GA++AN+ AA+ R
Sbjct: 493 ITIDKPDIKGRDQIFQIYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAAR 552
Query: 619 DGRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVAVNFPDLKNIEF 676
+T A G L++K R S R VA +E+ AV + +
Sbjct: 553 HEGATVTMAHFDSAID-RVIGGLEKKNRVISKLERRTVAYHESGHAVAGWFLEHAEPLLK 611
Query: 677 VTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIW 736
VTI PR LG+ + ++ + +++++ L D + L RAA+++ G ++ST
Sbjct: 612 VTIVPRGTAALGFAQ----YVPNENLLMTKEQLFDMTCMTLGGRAAEQVLIG--RIST-G 664
Query: 737 AETADNARSAARTFV---LGGLSDKHFGLSNF-WVADRINE---------IDTEALRILN 783
A+ D + T+ + G SDK GL +F D ++ ID E +
Sbjct: 665 AQN-DLEKVTKMTYAQVAVYGFSDK-IGLLSFPQREDEFSKPYSNRTGAMIDEEVREWVG 722
Query: 784 LCYERAKEILQRNRNLLDAVVNELVEKKSLTKQE 817
Y+R E+++ ++ + + L+EK+ L + +
Sbjct: 723 KAYKRTVELIEEHKEQVAQIAELLLEKEVLHQDD 756
Score = 40 (19.1 bits), Expect = 7.9e-54, Sum P(2) = 7.9e-54
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 38 SCKNQNFNPQNEDRNKNQNSKRPHLGLLTIPVTLTIISTSLAQ 80
S KN+N N + N+ QN P + + I T ++ S Q
Sbjct: 120 SKKNENENAGDAFSNEYQNMLIPLMAIALILSTFSLGSREQQQ 162
>ZFIN|ZDB-GENE-070912-46 [details] [associations]
symbol:afg3l2 "AFG3 ATPase family gene 3-like 2 (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-070912-46 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:10939 MEROPS:M41.007 EMBL:BX000484 EMBL:BC155655
IPI:IPI00513225 RefSeq:NP_001104667.1 UniGene:Dr.82691 SMR:A9JRG9
STRING:A9JRG9 Ensembl:ENSDART00000089834 GeneID:569168
KEGG:dre:569168 NextBio:20889547 Uniprot:A9JRG9
Length = 800
Score = 556 (200.8 bits), Expect = 1.2e-53, P = 1.2e-53
Identities = 153/406 (37%), Positives = 236/406 (58%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKA AGEA V F +++ S+F+E++VGVG +RVR L+ A+ NAP ++FIDE+DAVG
Sbjct: 349 KTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDLFVLARKNAPCILFIDEIDAVG 408
Query: 502 RERGLIKGS-GGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDR 559
R+RG +G+ GGQ E++ TLNQLLV +DGF NV+ +A TNRPDILDPAL+RPGRFDR
Sbjct: 409 RKRG--RGNFGGQSEQENTLNQLLVEMDGFNTATNVVVLAGTNRPDILDPALMRPGRFDR 466
Query: 560 KIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVA----SMTDGMVGAELANIVEVAAIN 615
+I+I P + GR I KVH R + ++D A+A ++T G GA++AN+ AA+
Sbjct: 467 QIYIGPPDIKGRASIFKVHLRPLKLEAELDKEALARKMAALTPGFSGADIANVCNEAALI 526
Query: 616 MMRDGRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVAVNFPDLKN 673
R I QA + G L++K + E + VA +EA AV
Sbjct: 527 AARHLSDAINQKHFEQAIE-RVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWFLEHADP 585
Query: 674 IEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLS 733
+ V+I PR G+ LGY + ++ ++ + +++ LLD + + L R ++E++ G +++
Sbjct: 586 LLKVSIIPR-GKGLGYAQ----YLPKEQYLYTKEQLLDRMCMTLGGRVSEEIFFG--RIT 638
Query: 734 TIWAETADNA-RSAARTFVLGGLSDK----HFGL--SNFWVADR-INE-----IDTEALR 780
T + +SA V G+++K F L V ++ +E IDTE
Sbjct: 639 TGAQDDLKKVTQSAYAQIVQFGMNEKVGQVSFDLPRQGELVLEKPYSEATARLIDTEVRN 698
Query: 781 ILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLVELHG 826
+++ YER +++L + ++ V L+EK+ L K + +VEL G
Sbjct: 699 LISTAYERTQQLLSDKKPEVEKVALRLLEKEVLDKND---MVELLG 741
>UNIPROTKB|F1N9N5 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
OMA:LYRFVTT EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00683486 Ensembl:ENSGALT00000016639 ArrayExpress:F1N9N5
Uniprot:F1N9N5
Length = 635
Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
Identities = 152/403 (37%), Positives = 231/403 (57%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKA AGEA V F +++ S+F+E++VGVG +RVR L+ A+ NAP ++FIDE+DAVG
Sbjct: 198 KTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVG 257
Query: 502 RERGLIKGS-GGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDR 559
R+RG +G+ GGQ E++ TLNQLLV +DGF NV+ +A TNRPDILDPAL+RPGRFDR
Sbjct: 258 RKRG--RGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDR 315
Query: 560 KIFIPKPGLIGRMEILKVHAR--KKPMADDVDYLA--VASMTDGMVGAELANIVEVAAIN 615
+I+I P + GR I KVH R K D D LA +AS+T G GA++AN+ AA+
Sbjct: 316 QIYIGPPDIKGRASIFKVHLRPLKLDTVLDKDNLARKLASLTPGFSGADIANVCNEAALI 375
Query: 616 MMRDGRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVAVNFPDLKN 673
R I QA + G L++K + E + VA +EA AV
Sbjct: 376 AARHLSDAINQKHFEQAIE-RVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWFLEHADP 434
Query: 674 IEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLS 733
+ V+I PR G+ LGY + ++ ++ + +++ LLD + + L R +++++ G +++
Sbjct: 435 LLKVSIIPR-GKGLGYAQ----YLPKEQYLYTKEQLLDRMCMTLGGRVSEQIFFG--RIT 487
Query: 734 TIWAETADNA-RSAARTFVLGGLSDKHFGLSNFWV---ADRINE----------IDTEAL 779
T + +SA V G+++K G +F + D + E ID E
Sbjct: 488 TGAQDDLKKVTQSAYAQIVQFGMNEK-VGQISFDLPRQGDMVLEKPYSEATARMIDEEVR 546
Query: 780 RILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLV 822
++N+ Y+R +L + ++ V L+EK+ L K + L+
Sbjct: 547 SLINIAYDRTLSLLTEKKAEVEKVALRLLEKEVLDKSDMVDLL 589
>UNIPROTKB|E1BZ74 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0016265 "death" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0042407 "cristae formation" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0060013 "righting
reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0008270 GO:GO:0006508
GO:GO:0040014 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 GO:GO:0016265
GO:GO:0060013 EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00603273 Ensembl:ENSGALT00000022474 ArrayExpress:E1BZ74
Uniprot:E1BZ74
Length = 805
Score = 554 (200.1 bits), Expect = 2.4e-53, P = 2.4e-53
Identities = 152/403 (37%), Positives = 231/403 (57%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKA AGEA V F +++ S+F+E++VGVG +RVR L+ A+ NAP ++FIDE+DAVG
Sbjct: 354 KTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVG 413
Query: 502 RERGLIKGS-GGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDR 559
R+RG +G+ GGQ E++ TLNQLLV +DGF NV+ +A TNRPDILDPAL+RPGRFDR
Sbjct: 414 RKRG--RGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDR 471
Query: 560 KIFIPKPGLIGRMEILKVHAR--KKPMADDVDYLA--VASMTDGMVGAELANIVEVAAIN 615
+I+I P + GR I KVH R K D D LA +AS+T G GA++AN+ AA+
Sbjct: 472 QIYIGPPDIKGRASIFKVHLRPLKLDTVLDKDNLARKLASLTPGFSGADIANVCNEAALI 531
Query: 616 MMRDGRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVAVNFPDLKN 673
R I QA + G L++K + E + VA +EA AV
Sbjct: 532 AARHLSDAINQKHFEQAIE-RVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWFLEHADP 590
Query: 674 IEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLS 733
+ V+I PR G+ LGY + ++ ++ + +++ LLD + + L R +++++ G +++
Sbjct: 591 LLKVSIIPR-GKGLGYAQ----YLPKEQYLYTKEQLLDRMCMTLGGRVSEQIFFG--RIT 643
Query: 734 TIWAETADNA-RSAARTFVLGGLSDKHFGLSNFWV---ADRINE----------IDTEAL 779
T + +SA V G+++K G +F + D + E ID E
Sbjct: 644 TGAQDDLKKVTQSAYAQIVQFGMNEK-VGQISFDLPRQGDMVLEKPYSEATARMIDEEVR 702
Query: 780 RILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLV 822
++N+ Y+R +L + ++ V L+EK+ L K + L+
Sbjct: 703 SLINIAYDRTLSLLTEKKAEVEKVALRLLEKEVLDKSDMVDLL 745
>CGD|CAL0002950 [details] [associations]
symbol:YME1 species:5476 "Candida albicans" [GO:0031942
"i-AAA complex" evidence=IEA] [GO:0006515 "misfolded or
incompletely synthesized protein catabolic process" evidence=IEA]
[GO:0001300 "chronological cell aging" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 CGD:CAL0002950 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.004
EMBL:AACQ01000068 EMBL:AACQ01000067 KO:K08955 RefSeq:XP_716504.1
RefSeq:XP_716560.1 ProteinModelPortal:Q5A458 SMR:Q5A458
STRING:Q5A458 GeneID:3641816 GeneID:3641839 KEGG:cal:CaO19.1252
KEGG:cal:CaO19.8836 Uniprot:Q5A458
Length = 687
Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
Identities = 155/426 (36%), Positives = 236/426 (55%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+A AGEAGV FF +S S+F E+YVGVGA R+R L+ +A+D AP+++FIDELDA+G
Sbjct: 271 KTLLARATAGEAGVPFFFMSGSEFDELYVGVGAKRIRELFSQARDKAPAIIFIDELDAIG 330
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R + ++ TLNQLLV LDGF +I I +TN P+ LD AL RPGRFD+++
Sbjct: 331 GKRNPKDQAYAKQ---TLNQLLVELDGFSQTEGIIIIGATNFPESLDKALTRPGRFDKEV 387
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
+ P + GR++ILK H + ADDVD +A T G+ GAEL N+V AA++ +
Sbjct: 388 IVDLPDVRGRIDILKHHMQNVETADDVDPSIIARGTPGLSGAELMNLVNQAAVHASQLSA 447
Query: 622 TEITTDDLLQAAQIEERGMLDRKERSSETWR-QVAINEAAMAVVAVNFPDLKNIEFVTIA 680
+ + A G +K +E R A +EA A++A+ + TI
Sbjct: 448 PAVDMNHFEWAKDKILMGAAKKKMVITEESRINTAYHEAGHAIMAMFSKGATPLYKATIL 507
Query: 681 PRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETA 740
PR GR LG + ++ M K M S+Q + V + + A+E+ G+ +++ A
Sbjct: 508 PR-GRALG-ITFQLPEMD-KVDM-SKQECFARLDVCMGGKIAEEMINGKENVTSGCASDL 563
Query: 741 DNARSAARTFVLG-GLSDKHFG---LSNFWVA--DRI-NEIDTEALRILNLCYERAKEIL 793
NA S AR V G+SDK G LS+ W + +I N D E L +R +++L
Sbjct: 564 SNATSVARAMVTSYGMSDK-IGPVRLSDDWESWSPQIRNMADNEVRDYLLDSEKRTRKLL 622
Query: 794 QRNRNLLDAVVNELVEKKSLTKQEFFHLV--ELHGSLEPMPPSIVDIRAAKHSEIQEIMT 851
R L + L+E ++LTK+E +V E + M +++ +++K SEI++I+
Sbjct: 623 YDKRLELKRLAEGLLEYETLTKEEMEKVVKGEPINKAKTMSNTVIK-KSSKSSEIKDILN 681
Query: 852 NQNVTS 857
+ T+
Sbjct: 682 DPMPTA 687
>SGD|S000000819 [details] [associations]
symbol:AFG3 "Component, with Yta12p, of the mitochondrial
inner membrane m-AAA pro" species:4932 "Saccharomyces cerevisiae"
[GO:0016887 "ATPase activity" evidence=ISS;IMP;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0031966 "mitochondrial
membrane" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA;IMP] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA;IMP]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IDA] [GO:0001302 "replicative cell
aging" evidence=IMP] [GO:0002181 "cytoplasmic translation"
evidence=IMP] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006461 "protein complex assembly"
evidence=IMP] [GO:0006465 "signal peptide processing" evidence=IMP]
[GO:0005745 "m-AAA complex" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 SGD:S000000819
GO:GO:0005524 GO:GO:0006461 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0001302 GO:GO:0004222
GO:GO:0016887 EMBL:BK006939 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277 KO:K08956
TIGRFAMs:TIGR01241 OMA:LYRFVTT EMBL:X81066 EMBL:X76643 EMBL:U18778
PIR:S46611 RefSeq:NP_010933.1 ProteinModelPortal:P39925 SMR:P39925
DIP:DIP-802N IntAct:P39925 MINT:MINT-563722 STRING:P39925
MEROPS:M41.002 PaxDb:P39925 PeptideAtlas:P39925
EnsemblFungi:YER017C GeneID:856737 KEGG:sce:YER017C CYGD:YER017c
OrthoDB:EOG4J14HG NextBio:982861 Genevestigator:P39925
GermOnline:YER017C GO:GO:0005745 GO:GO:0097002 GO:GO:0002181
GO:GO:0045041 GO:GO:0006465 Uniprot:P39925
Length = 761
Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
Identities = 151/401 (37%), Positives = 221/401 (55%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKA AGEA V F S+S S+FVE++VGVGASRVR L+ +A+ APS++FIDE+DA+G
Sbjct: 334 KTLLAKATAGEANVPFLSVSGSEFVEMFVGVGASRVRDLFTQARSMAPSIIFIDEIDAIG 393
Query: 502 RERGLIKGSGG--QERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDR 559
+ERG GG ER+ATLNQLLV +DGF V+ +A TNRPD+LD AL+RPGRFDR
Sbjct: 394 KERGKGGALGGANDEREATLNQLLVEMDGFTTSDQVVVLAGTNRPDVLDNALMRPGRFDR 453
Query: 560 KIFIPKPGLIGRMEILKVHARK---KPM-ADDVDYLA--VASMTDGMVGAELANIVEVAA 613
I I P + GR +I VH ++ P+ DD++ L+ +A++T G GA++AN AA
Sbjct: 454 HIQIDSPDVNGRQQIYLVHLKRLNLDPLLTDDMNNLSGKLATLTPGFTGADIANACNEAA 513
Query: 614 INMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVAVNFPDL 671
+ R IT QA + G L++K R S E R VA +EA AV
Sbjct: 514 LIAARHNDPYITIHHFEQAIERVIAG-LEKKTRVLSKEEKRSVAYHEAGHAVCGWFLKYA 572
Query: 672 KNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELW---CG 728
+ V+I PR LGY + ++ + ++S + + + L R ++EL
Sbjct: 573 DPLLKVSIIPRGQGALGYAQ----YLPPDQYLISEEQFRHRMIMALGGRVSEELHFPSVT 628
Query: 729 EGQLSTIWAETA-DNAR--SAARTFVLGGLS----DKHFGLSNFWVADRINEIDTEALRI 781
G T NA S + +G LS D +F ++ + ID E I
Sbjct: 629 SGAHDDFKKVTQMANAMVTSLGMSPKIGYLSFDQNDGNFKVNKPFSNKTARTIDLEVKSI 688
Query: 782 LNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLV 822
++ + E+L +N + +D V EL+ K+++T+++ L+
Sbjct: 689 VDDAHRACTELLTKNLDKVDLVAKELLRKEAITREDMIRLL 729
>UNIPROTKB|Q9Y4W6 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9606 "Homo
sapiens" [GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0021675 "nerve
development" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0051082 "unfolded protein binding" evidence=TAS]
[GO:0005739 "mitochondrion" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0008219 DrugBank:DB00171 GO:GO:0007528 GO:GO:0051082
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 eggNOG:COG0465
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 GO:GO:0021675 GO:GO:0060013 EMBL:Y18314 EMBL:BC065016
IPI:IPI00001091 RefSeq:NP_006787.2 UniGene:Hs.726355 PDB:2LNA
PDBsum:2LNA ProteinModelPortal:Q9Y4W6 SMR:Q9Y4W6 IntAct:Q9Y4W6
MINT:MINT-1161944 STRING:Q9Y4W6 MEROPS:M41.007 PhosphoSite:Q9Y4W6
DMDM:126302516 PaxDb:Q9Y4W6 PeptideAtlas:Q9Y4W6 PRIDE:Q9Y4W6
Ensembl:ENST00000269143 GeneID:10939 KEGG:hsa:10939 UCSC:uc002kqz.2
GeneCards:GC18M012328 H-InvDB:HIX0027367 HGNC:HGNC:315
HPA:HPA004479 HPA:HPA004480 MIM:604581 MIM:610246 MIM:614487
neXtProt:NX_Q9Y4W6 Orphanet:101109 PharmGKB:PA24612
InParanoid:Q9Y4W6 PhylomeDB:Q9Y4W6 GenomeRNAi:10939 NextBio:41551
ArrayExpress:Q9Y4W6 Bgee:Q9Y4W6 CleanEx:HS_AFG3L2
Genevestigator:Q9Y4W6 GermOnline:ENSG00000141385 Uniprot:Q9Y4W6
Length = 797
Score = 548 (198.0 bits), Expect = 1.0e-52, P = 1.0e-52
Identities = 157/407 (38%), Positives = 233/407 (57%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKA AGEA V F ++S S+F+E++VGVG +RVR L+ A+ NAP ++FIDE+DAVG
Sbjct: 354 KTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVG 413
Query: 502 RERGLIKGS-GGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDR 559
R+RG +G+ GGQ E++ TLNQLLV +DGF NV+ +A TNRPDILDPAL+RPGRFDR
Sbjct: 414 RKRG--RGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDR 471
Query: 560 KIFIPKPGLIGRMEILKVHAR--KKPMADDVDYLA--VASMTDGMVGAELANIVEVAAIN 615
+IFI P + GR I KVH R K + D LA +AS+T G GA++AN+ AA+
Sbjct: 472 QIFIGPPDIKGRASIFKVHLRPLKLDSTLEKDKLARKLASLTPGFSGADVANVCNEAALI 531
Query: 616 MMRDGRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVAVNFPDLKN 673
R I QA + G L++K + E + VA +EA AV
Sbjct: 532 AARHLSDSINQKHFEQAIE-RVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADP 590
Query: 674 IEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLS 733
+ V+I PR G+ LGY + ++ ++ + +++ LLD + + L R ++E++ G +++
Sbjct: 591 LLKVSIIPR-GKGLGYAQ----YLPKEQYLYTKEQLLDRMCMTLGGRVSEEIFFG--RIT 643
Query: 734 T-IWAETADNARSAARTFVLGGLSDKHFGLSNFWV---ADRINE----------IDTEAL 779
T + +SA V G+++K G +F + D + E ID E
Sbjct: 644 TGAQDDLRKVTQSAYAQIVQFGMNEK-VGQISFDLPRQGDMVLEKPYSEATARLIDDEVR 702
Query: 780 RILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLVELHG 826
++N Y+R +L + ++ V L+EK+ L K + +VEL G
Sbjct: 703 ILINDAYKRTVALLTEKKADVEKVALLLLEKEVLDKND---MVELLG 746
>UNIPROTKB|E2QYF3 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060013 "righting reflex" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0042407 "cristae
formation" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
EMBL:AAEX03005521 RefSeq:XP_547682.2 ProteinModelPortal:E2QYF3
Ensembl:ENSCAFT00000029872 GeneID:490560 KEGG:cfa:490560
Uniprot:E2QYF3
Length = 806
Score = 548 (198.0 bits), Expect = 1.2e-52, P = 1.2e-52
Identities = 157/407 (38%), Positives = 234/407 (57%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKA AGEA V F ++S S+F+E++VGVG +RVR L+ A+ NAP ++FIDE+DAVG
Sbjct: 355 KTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVG 414
Query: 502 RERGLIKGS-GGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDR 559
R+RG +G+ GGQ E++ TLNQLLV +DGF NV+ +A TNRPDILDPAL+RPGRFDR
Sbjct: 415 RKRG--RGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDR 472
Query: 560 KIFIPKPGLIGRMEILKVHAR--KKPMADDVDYLA--VASMTDGMVGAELANIVEVAAIN 615
+IFI P + GR I KVH R K A + + LA +AS+T G GA++AN+ AA+
Sbjct: 473 QIFIGPPDIKGRASIFKVHLRPLKLDSALEKEKLARKLASLTPGFSGADVANVCNEAALI 532
Query: 616 MMRDGRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVAVNFPDLKN 673
R I QA + G L++K + E + VA +EA AV
Sbjct: 533 AARHLSDSINQKHFEQAIE-RVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADP 591
Query: 674 IEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLS 733
+ V+I PR G+ LGY + ++ ++ + +++ LLD + + L R ++E++ G +++
Sbjct: 592 LLKVSIIPR-GKGLGYAQ----YLPKEQYLYTKEQLLDRMCMTLGGRVSEEIFFG--RIT 644
Query: 734 T-IWAETADNARSAARTFVLGGLSDKHFGLSNFWV---ADRINE----------IDTEAL 779
T + +SA V G+++K G +F + D + E ID E
Sbjct: 645 TGAQDDLRKVTQSAYAQIVQFGMNEK-VGQISFDLPRQGDMVLEKPYSEATARLIDDEVR 703
Query: 780 RILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLVELHG 826
++N Y+R +L + ++ V L+EK+ L K + +VEL G
Sbjct: 704 ILINDAYKRTVALLTEKKADVEKVALLLLEKEVLDKND---MVELLG 747
>UNIPROTKB|F1LN92 [details] [associations]
symbol:Afg3l2 "Protein Afg3l2" species:10116 "Rattus
norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016265 "death" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0021675 "nerve development" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1305259
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
IPI:IPI00192903 RefSeq:NP_001128336.1 UniGene:Rn.8386
ProteinModelPortal:F1LN92 PRIDE:F1LN92 Ensembl:ENSRNOT00000024632
GeneID:307350 KEGG:rno:307350 NextBio:657254 ArrayExpress:F1LN92
Uniprot:F1LN92
Length = 802
Score = 547 (197.6 bits), Expect = 1.4e-52, P = 1.4e-52
Identities = 157/407 (38%), Positives = 234/407 (57%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKA AGEA V F ++S S+F+E++VGVG +RVR L+ A+ NAP ++FIDE+DAVG
Sbjct: 353 KTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVG 412
Query: 502 RERGLIKGS-GGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDR 559
R+RG +G+ GGQ E++ TLNQLLV +DGF NV+ +A TNRPDILDPAL+RPGRFDR
Sbjct: 413 RKRG--RGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDR 470
Query: 560 KIFIPKPGLIGRMEILKVHAR--KKPMADDVDYLA--VASMTDGMVGAELANIVEVAAIN 615
+IFI P + GR I KVH R K A + D LA +AS+T G GA++AN+ AA+
Sbjct: 471 QIFIGPPDIKGRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVANVCNEAALI 530
Query: 616 MMRDGRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVAVNFPDLKN 673
R I QA + G L++K + E + VA +EA AV
Sbjct: 531 AARHLSDAINEKHFEQAIE-RVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADP 589
Query: 674 IEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLS 733
+ V+I PR G+ LGY + ++ ++ + +++ LLD + + L R ++E++ G +++
Sbjct: 590 LLKVSIIPR-GKGLGYAQ----YLPKEQYLYTKEQLLDRMCMTLGGRVSEEIFFG--RIT 642
Query: 734 T-IWAETADNARSAARTFVLGGLSDKHFGLSNFWV---ADRINE----------IDTEAL 779
T + +SA V G+++K G +F + D + E ID E
Sbjct: 643 TGAQDDLRKVTQSAYAQIVQFGMNEK-VGQISFDLPRQGDMVLEKPYSEATARMIDDEVR 701
Query: 780 RILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLVELHG 826
+++ Y+R +L + ++ V L+EK+ L K + +VEL G
Sbjct: 702 ILISEAYKRTVALLTEKKADVEKVALLLLEKEVLDKND---MVELLG 745
>UNIPROTKB|Q2KJI7 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9913 "Bos
taurus" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0046872 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 MEROPS:M41.016
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:BC105322 IPI:IPI00686580 RefSeq:NP_001039676.1 UniGene:Bt.1657
HSSP:Q9WZ49 ProteinModelPortal:Q2KJI7 SMR:Q2KJI7 STRING:Q2KJI7
PRIDE:Q2KJI7 Ensembl:ENSBTAT00000031029 GeneID:515757
KEGG:bta:515757 CTD:10939 InParanoid:Q2KJI7 OMA:LYRFVTT
NextBio:20871990 GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
Uniprot:Q2KJI7
Length = 805
Score = 547 (197.6 bits), Expect = 1.5e-52, P = 1.5e-52
Identities = 157/407 (38%), Positives = 233/407 (57%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKA AGEA V F ++S S+F+E++VGVG +RVR L+ A+ NAP ++FIDE+DAVG
Sbjct: 355 KTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVG 414
Query: 502 RERGLIKGS-GGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDR 559
R+RG +G+ GGQ E++ TLNQLLV +DGF NV+ +A TNRPDILDPAL+RPGRFDR
Sbjct: 415 RKRG--RGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDR 472
Query: 560 KIFIPKPGLIGRMEILKVHAR--KKPMADDVDYLA--VASMTDGMVGAELANIVEVAAIN 615
+IFI P + GR I KVH R K + + LA +AS+T G GA++AN+ AA+
Sbjct: 473 QIFIGPPDIKGRASIFKVHLRPLKLDSTLEKEKLARKLASLTPGFSGADVANVCNEAALI 532
Query: 616 MMRDGRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVAVNFPDLKN 673
R I QA + G L++K + E + VA +EA AV
Sbjct: 533 AARHLSDSINQKHFEQAIE-RVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADP 591
Query: 674 IEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLS 733
+ V+I PR G+ LGY + ++ ++ + +R+ LLD + + L R ++E++ G +++
Sbjct: 592 LLKVSIIPR-GKGLGYAQ----YLPREQYLYTREQLLDRMCMTLGGRVSEEIFFG--RIT 644
Query: 734 T-IWAETADNARSAARTFVLGGLSDKHFGLSNFWV---ADRINE----------IDTEAL 779
T + +SA V G+++K G +F + D + E ID E
Sbjct: 645 TGAQDDLRKVTQSAYAQIVQFGMNEK-VGQISFDLPRQGDMVLEKPYSEATARLIDDEVR 703
Query: 780 RILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLVELHG 826
++N Y+R +L + ++ V L+EK+ L K + +VEL G
Sbjct: 704 ILINDAYKRTVALLTEKKADVEKVALLLLEKEVLDKND---MVELLG 747
>FB|FBgn0036702 [details] [associations]
symbol:CG6512 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0046331
"lateral inhibition" evidence=IMP] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:AE014296
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0030163 GO:GO:0046331
GeneTree:ENSGT00530000063070 KO:K08956 TIGRFAMs:TIGR01241
OMA:YSEDTAM HSSP:Q9LCZ4 UniGene:Dm.986 GeneID:39922
KEGG:dme:Dmel_CG6512 FlyBase:FBgn0036702 GenomeRNAi:39922
NextBio:816090 EMBL:AY084199 RefSeq:NP_730248.2 SMR:Q8T4G5
IntAct:Q8T4G5 MINT:MINT-1004758 STRING:Q8T4G5
EnsemblMetazoa:FBtr0075251 UCSC:CG6512-RA InParanoid:Q8T4G5
Uniprot:Q8T4G5
Length = 826
Score = 548 (198.0 bits), Expect = 1.6e-52, P = 1.6e-52
Identities = 144/399 (36%), Positives = 219/399 (54%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKA AGEA V F ++S S+F+E++VGVG SRVR ++ A+ +AP ++FIDE+DAVG
Sbjct: 374 KTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFAMARKHAPCILFIDEIDAVG 433
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
R+RG G E++ TLNQLLV +DGF NV+ +A+TNR DILD AL+RPGRFDR+I
Sbjct: 434 RKRGGKTFGGHSEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDILDKALMRPGRFDRQI 493
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLA--VASMTDGMVGAELANIVEVAAINMMRD 619
++P P + GR I KVH + D + L+ +A++T G GA++AN+ AA+ RD
Sbjct: 494 YVPAPDIKGRASIFKVHLGNLKTSLDKNELSRKMAALTPGFTGADIANVCNEAALIAARD 553
Query: 620 GRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVAVNFPDLKNIEFV 677
+ I QA + GM ++K + E R VA +EA AV + V
Sbjct: 554 SKDSIVLKHFEQAIERVIAGM-EKKTNVLAPEEKRTVAHHEAGHAVAGWFLEHADPLLKV 612
Query: 678 TIAPRAGRELGYVR-MKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCG------EG 730
+I PR G+ LGY + + DH +LS++ L D + + L R A+EL+ +
Sbjct: 613 SIIPR-GKGLGYAQYLPKDHY-----LLSKEQLFDRMCMTLGGRVAEELFFNRITTGAQD 666
Query: 731 QLSTI----WAETAD---NARSAARTFVLGGLSDKHFGLSNFWVADRINEIDTEALRILN 783
L I +++ N + +F +G D F S + D ID E I+
Sbjct: 667 DLKKITDIAYSQVVRFGMNEKVGQVSFDVGQAGDPVF--SKPYSEDTAQLIDNEVRSIIK 724
Query: 784 LCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLV 822
+E +L +++ + V L++ + L++ + L+
Sbjct: 725 CAHEATTSLLTKHKENVQKVAERLLQNEVLSRDDMIELL 763
>TAIR|locus:2066128 [details] [associations]
symbol:ftsh3 "FTSH protease 3" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 EMBL:AC005315 GO:GO:0030163 eggNOG:COG0465
HOGENOM:HOG000217277 KO:K08956 OMA:WDEKDFR TIGRFAMs:TIGR01241
HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0004176 EMBL:BT002743 EMBL:AY063914
EMBL:AK226271 IPI:IPI00525466 PIR:T02738 RefSeq:NP_850129.1
UniGene:At.24335 ProteinModelPortal:Q84WU8 SMR:Q84WU8
MEROPS:M41.022 PaxDb:Q84WU8 PRIDE:Q84WU8 EnsemblPlants:AT2G29080.1
GeneID:817456 KEGG:ath:AT2G29080 GeneFarm:2506 TAIR:At2g29080
InParanoid:Q84WU8 PhylomeDB:Q84WU8 ProtClustDB:CLSN2692039
Genevestigator:Q84WU8 Uniprot:Q84WU8
Length = 809
Score = 547 (197.6 bits), Expect = 1.6e-52, P = 1.6e-52
Identities = 149/400 (37%), Positives = 226/400 (56%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKA AGE+GV F SIS S F+E++VGVG SRVR L+QEA+ APS++FIDE+DA+G
Sbjct: 368 KTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRHLFQEARQAAPSIIFIDEIDAIG 427
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
R RG G ER++TLNQLLV +DGF V+ +A TNRPDILD AL+RPGRFDR+I
Sbjct: 428 RARGRGGLGGNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQI 487
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLA--VASMTDGMVGAELANIVEVAAINMMRD 619
I KP + GR +I K++ +K + + Y + +A++T G GA++AN+ AA+ R
Sbjct: 488 TIDKPDIKGRDQIFKIYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARH 547
Query: 620 GRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVAVNFPDLKNIEFV 677
+T ++A G L++K R S R VA +E+ AVV + + V
Sbjct: 548 EGATVTMAHF-ESAIDRVIGGLEKKNRVISKLERRTVAYHESGHAVVGWFLEHAEPLLKV 606
Query: 678 TIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWA 737
TI PR LG+ + ++ + +++++ L D + L RAA+++ G+ +ST A
Sbjct: 607 TIVPRGTAALGFAQ----YVPNENLLMTKEQLFDMTCMTLGGRAAEQVLIGK--IST-GA 659
Query: 738 ETADNARSAARTFV---LGGLSDKHFGLSNFWVADR--------INE----IDTEALRIL 782
+ D + T+ + G SDK GL +F D N+ ID E +
Sbjct: 660 QN-DLEKVTKMTYAQVAVYGFSDK-VGLLSFPPRDDGYDFSKPYSNKTGAIIDEEVRDWV 717
Query: 783 NLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLV 822
YER E+++ ++ + + L+EK+ L + + ++
Sbjct: 718 AKAYERTVELVEEHKVKVAEIAELLLEKEVLHQDDLLKIL 757
>DICTYBASE|DDB_G0267492 [details] [associations]
symbol:DDB_G0267492 "peptidase M41, FtsH
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0267492 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
EMBL:AAFI02000003 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 RefSeq:XP_647076.1
ProteinModelPortal:Q55GV8 SMR:Q55GV8 MEROPS:M41.A18
EnsemblProtists:DDB0189322 GeneID:8615880 KEGG:ddi:DDB_G0267492
OMA:RINENNQ Uniprot:Q55GV8
Length = 720
Score = 528 (190.9 bits), Expect = 2.5e-52, Sum P(2) = 2.5e-52
Identities = 142/390 (36%), Positives = 221/390 (56%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAK++AGEA V+F +I+ S+F E +VGVGA RVR L++ A+ N+P +VFIDE+D+VG
Sbjct: 210 KTLLAKSLAGEARVSFITINGSEFEEAFVGVGAKRVRELFEAARKNSPCIVFIDEIDSVG 269
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
R K +A LNQLLV LDGF+GR V+ +A+TN D LD AL+R GRFDR I
Sbjct: 270 GSR--TKRVNYHPSEA-LNQLLVELDGFDGREGVMVMAATNYQDSLDTALIRSGRFDRII 326
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
+P P R I+ + + KP+A V+ +A T G GA+L N+V AA+ +
Sbjct: 327 QVPLPDGKARKSIIDHYLKDKPIASHVNTTTIAQSTPGFSGADLFNLVNWAALETTKHNL 386
Query: 622 TEITTDDLLQAAQIEERGMLDRKERS---SETWRQV-AINEAAMAVVAVNFPDLKNIEFV 677
EIT + L A +E M+ ++ S S+ R++ A +EA A+VA+ P + +
Sbjct: 387 PEITMEQLENA---KENLMMGKERHSLLMSDEARKICAFHEAGHALVAIMTPGARTVHKA 443
Query: 678 TIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWA 737
TI PR G LG V M ++ +E ++++ L+ + V + RAA+EL G+ +S +
Sbjct: 444 TIMPR-GDALGLVSM----LEKEETFVTKKQLIAQMDVAMGGRAAEELILGKENISQGAS 498
Query: 738 ETADNARSAARTFVLG-GLSDKHFGL---SNFWVADRINE-IDTEALRILNLCYERAKEI 792
A S A+ V G+S+K + S ++ E +D+E +L+ Y RA ++
Sbjct: 499 SDIQKATSIAKAMVSNYGMSEKVGQIYIQSEKKLSSAQRELVDSEVKSLLDSSYIRATQL 558
Query: 793 LQRNRNLLDAVVNELVEKKSLTKQEFFHLV 822
L++ + N L+E ++L+ E ++
Sbjct: 559 LKKYSKEHHLIANALLEYETLSLDEIKDII 588
Score = 37 (18.1 bits), Expect = 2.5e-52, Sum P(2) = 2.5e-52
Identities = 15/54 (27%), Positives = 28/54 (51%)
Query: 111 KKWSKDLPIVSDRIAYTEIFSLKDEGKLKHVIKSPSGSLRQKAEPVLVVLEDSR 164
+++S P++S R T IFS D KL + + + +L +P+ V + S+
Sbjct: 65 REFSTTKPLLSFRKRATSIFSGTD--KLNNQDQLNNNNLNV-GQPIKVQVVQSK 115
>DICTYBASE|DDB_G0293388 [details] [associations]
symbol:DDB_G0293388 "ATP-dependent metalloprotease"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0293388 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 EMBL:AAFI02000204
RefSeq:XP_629167.2 ProteinModelPortal:Q54BW7 STRING:Q54BW7
MEROPS:M41.A16 EnsemblProtists:DDB0304811 GeneID:8629188
KEGG:ddi:DDB_G0293388 InParanoid:Q54BW7 OMA:ICLAGRA Uniprot:Q54BW7
Length = 767
Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
Identities = 137/388 (35%), Positives = 220/388 (56%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+A+AGEAGV+F + S F E YVGVG+ RVR L+ A++ P ++FIDE+DAVG
Sbjct: 346 KTLLARAIAGEAGVSFLYTTGSSFDEKYVGVGSRRVRELFNAAREKQPCIIFIDEIDAVG 405
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+ R + TL QLL +DGFEG ++ I +TN P+ LDPAL+RPGRFDR I
Sbjct: 406 KSRNTA------HHNETLLQLLTEMDGFEGNSQIMIIGATNAPNSLDPALLRPGRFDRHI 459
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
+P P + GR EI+ + +K +V +A T G GA+L+N++ AAI +++G+
Sbjct: 460 SVPIPDMKGRSEIIDHYLKKVKHTVEVKADTIARATPGFTGADLSNLINTAAIKAVQNGK 519
Query: 622 TEITTDDLLQAAQ--IEERGMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEFVTI 679
I+ + A + R L+ S E R A +EA A+VA I TI
Sbjct: 520 ETISIKQIDDARDDILMGRARLNAV-MSEEARRNTAYHEAGHALVAAMTEAADPIHKATI 578
Query: 680 APRAGRELGYVRM--KMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWA 737
R G+ LG V +MDH+++ +R+ ++ + + LA RAA+E++ G +++ +
Sbjct: 579 VQR-GQALGMVSQLPEMDHVQY-----TRKQMMARLAICLAGRAAEEIFFGVDGVTSGAS 632
Query: 738 ETADNARSAARTFVLG-GLSDK-HFGLSNFWVADRINEI-DTEALRILNLCYERAKEILQ 794
A S A + + G+SDK F + + +I + E +L+ Y+ +KE++
Sbjct: 633 SDFQQASSLAFSMITKWGMSDKVGFIYHKDKTSPEVQKIIEDEVKDLLDKQYQYSKELII 692
Query: 795 RNRNLLDAVVNELVEKKSLTKQEFFHLV 822
+NR+ ++ +V +L+EK++LT +E ++
Sbjct: 693 KNRDNMEKLVGQLLEKETLTGEEILKIL 720
>TAIR|locus:2076929 [details] [associations]
symbol:AT3G02450 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR011546 Pfam:PF00004 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:AC021640
EMBL:CP002686 GO:GO:0051301 GO:GO:0008270 GO:GO:0009941
GO:GO:0004222 GO:GO:0017111 HSSP:Q9LCZ4 EMBL:AY062811 EMBL:BT008384
IPI:IPI00524458 RefSeq:NP_186894.1 UniGene:At.27477
ProteinModelPortal:Q9M895 SMR:Q9M895 STRING:Q9M895 PRIDE:Q9M895
EnsemblPlants:AT3G02450.1 GeneID:821139 KEGG:ath:AT3G02450
InParanoid:Q9M895 OMA:SRRIYYN ProtClustDB:CLSN2685201
Genevestigator:Q9M895 Uniprot:Q9M895
Length = 622
Score = 521 (188.5 bits), Expect = 2.9e-52, Sum P(2) = 2.9e-52
Identities = 111/228 (48%), Positives = 150/228 (65%)
Query: 421 YRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSL 480
Y++ G R KTLLA+AVAGEAGV FFS+SAS+FVE++VG GA+R+R L
Sbjct: 359 YKKLGARLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASEFVELFVGRGAARIRDL 418
Query: 481 YQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIAS 540
+ A+ N+PS++FIDELDAVG +RG S ERD TLNQLL +DGFE VI IA+
Sbjct: 419 FNAARKNSPSIIFIDELDAVGGKRGR---SFNDERDQTLNQLLTEMDGFESDTKVIVIAA 475
Query: 541 TNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLA--VASMTD 598
TNRP+ LD AL RPGRF RK+ + +P GR +IL +H R P+ +D + VAS+T
Sbjct: 476 TNRPEALDSALCRPGRFSRKVLVAEPDQEGRRKILAIHLRDVPLEEDAFLICDLVASLTP 535
Query: 599 GMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER 646
G VGA+LANIV AA+ R G + +D+++A + + G+ D++ R
Sbjct: 536 GFVGADLANIVNEAALLAARRGGEAVAREDIMEAIERAKFGINDKEAR 583
Score = 38 (18.4 bits), Expect = 2.9e-52, Sum P(2) = 2.9e-52
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 193 VNAYTPPLKKPEVPNPYLGF 212
++A P KK NP +GF
Sbjct: 314 LSASNSPAKKRRSKNPTVGF 333
>MGI|MGI:1916847 [details] [associations]
symbol:Afg3l2 "AFG3(ATPase family gene 3)-like 2 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IGI] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0008053 "mitochondrial fusion"
evidence=IGI] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016265 "death" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0021675 "nerve development" evidence=IMP]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IGI] [GO:0040014
"regulation of multicellular organism growth" evidence=IMP]
[GO:0042407 "cristae formation" evidence=IGI] [GO:0042552
"myelination" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048747 "muscle fiber development" evidence=IMP]
[GO:0060013 "righting reflex" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1916847
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
MEROPS:M41.007 EMBL:BC036999 EMBL:BC043056 IPI:IPI00170357
RefSeq:NP_081406.1 UniGene:Mm.426052 ProteinModelPortal:Q8JZQ2
SMR:Q8JZQ2 IntAct:Q8JZQ2 STRING:Q8JZQ2 PhosphoSite:Q8JZQ2
PaxDb:Q8JZQ2 PRIDE:Q8JZQ2 Ensembl:ENSMUST00000025408 GeneID:69597
KEGG:mmu:69597 UCSC:uc008fmf.1 InParanoid:Q8JZQ2 NextBio:329880
Bgee:Q8JZQ2 CleanEx:MM_AFG3L2 Genevestigator:Q8JZQ2
GermOnline:ENSMUSG00000024527 Uniprot:Q8JZQ2
Length = 802
Score = 544 (196.6 bits), Expect = 3.2e-52, P = 3.2e-52
Identities = 154/403 (38%), Positives = 230/403 (57%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKA AGEA V F ++S S+F+E++VGVG +RVR L+ A+ NAP ++FIDE+DAVG
Sbjct: 353 KTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVG 412
Query: 502 RERGLIKGS-GGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDR 559
R+RG +G+ GGQ E++ TLNQLLV +DGF NV+ +A TNRPDILDPAL+RPGRFDR
Sbjct: 413 RKRG--RGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDR 470
Query: 560 KIFIPKPGLIGRMEILKVHAR--KKPMADDVDYLA--VASMTDGMVGAELANIVEVAAIN 615
+IFI P + GR I KVH R K A + D LA +AS+T G GA++AN+ AA+
Sbjct: 471 QIFIGPPDIKGRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVANVCNEAALI 530
Query: 616 MMRDGRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVAVNFPDLKN 673
R I QA + G L++K + E + VA +EA AV
Sbjct: 531 AARHLSDAINEKHFEQAIE-RVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADP 589
Query: 674 IEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLS 733
+ V+I PR G+ LGY + ++ ++ + +++ LLD + + L R ++E++ G +++
Sbjct: 590 LLKVSIIPR-GKGLGYAQ----YLPKEQYLYTKEQLLDRMCMTLGGRVSEEIFFG--RIT 642
Query: 734 T-IWAETADNARSAARTFVLGGLSDKHFGLSNFWV---ADRINE----------IDTEAL 779
T + +SA V G+++K G +F + D + E ID E
Sbjct: 643 TGAQDDLRKVTQSAYAQIVQFGMNEK-VGQISFDLPRQGDMVLEKPYSEATARMIDDEVR 701
Query: 780 RILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLV 822
+++ Y R +L + ++ V L+EK+ L K + L+
Sbjct: 702 ILISDAYRRTVALLTEKKADVEKVALLLLEKEVLDKNDMVQLL 744
>GENEDB_PFALCIPARUM|PFL1925w [details] [associations]
symbol:PFL1925w "cell division protein FtsH,
putative" species:5833 "Plasmodium falciparum" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 547 (197.6 bits), Expect = 3.3e-52, P = 3.3e-52
Identities = 151/436 (34%), Positives = 235/436 (53%)
Query: 413 VD-VKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVG 471
VD +K + Y G R KT+LA+AVA EA V + S +F+EIYVG
Sbjct: 165 VDFIKNREKYHEMGARMPKGVLLVGPPGSGKTMLARAVATEANVPYIYTSGPEFIEIYVG 224
Query: 472 VGASRVRSLYQEAKDNAPSVVFIDELDAVGRER--GLIKGSGGQERDATLNQLLVCLDGF 529
GA R+R L+ A+ APS+VFIDE+DA+G +R G + G+G +E D TLNQLLV +DGF
Sbjct: 225 QGAKRIRQLFAHARSVAPSIVFIDEIDAIGGKRSSGSVNGAGQREHDQTLNQLLVEMDGF 284
Query: 530 EGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARK-KPMADDV 588
+++ I +TNR D LD AL+RPGRFDR +++P P + GR +IL+++ +K K
Sbjct: 285 SNTVHIMVIGATNRIDTLDSALLRPGRFDRIVYVPLPDINGRKKILEIYIKKIKSDLKLE 344
Query: 589 DYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSS 648
D +A +T G GA+L N+V A I R+ ++ +T ++L +A G + R S
Sbjct: 345 DIEKIARLTPGFSGADLENVVNEATILATRNNKSLVTINELYEARDKVSMGPERKSLRQS 404
Query: 649 ETWRQV-AINEAAMAVVAVNF-PDLKNIEFVTIAPRAGRELGYV-RMKMD--HMKFKEGM 703
+ R++ A +EA A+VA P I TI R G LGYV ++ +D H FK M
Sbjct: 405 DHQRRITAYHEAGHAIVAYFLQPKTDPIHKATIISR-GNALGYVEQIPVDDRHNYFKSQM 463
Query: 704 LSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFVLG-GLSDK---- 758
++ + V + R A+E+ G+ + S+ + A A V G+SDK
Sbjct: 464 EAK------LAVCMGGRTAEEIVFGKSETSSGASSDISRATEIAYKMVTEWGMSDKLGPL 517
Query: 759 ----HFG---LSNFWVADRINEIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKK 811
G SN A ++ I+ E ++ ++EIL+R+R LD + L++K+
Sbjct: 518 NYKKRMGDGYSSNRLSAQTVSSIEVEVKSLVEKGKSLSEEILRRHRKELDNLAFALLDKE 577
Query: 812 SLTKQEFFHLVELHGS 827
+L+ +E ++++ + S
Sbjct: 578 TLSGEEIKNIIDPNNS 593
>UNIPROTKB|Q8I526 [details] [associations]
symbol:PFL1925w "Cell division protein FtsH, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 547 (197.6 bits), Expect = 3.3e-52, P = 3.3e-52
Identities = 151/436 (34%), Positives = 235/436 (53%)
Query: 413 VD-VKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVG 471
VD +K + Y G R KT+LA+AVA EA V + S +F+EIYVG
Sbjct: 165 VDFIKNREKYHEMGARMPKGVLLVGPPGSGKTMLARAVATEANVPYIYTSGPEFIEIYVG 224
Query: 472 VGASRVRSLYQEAKDNAPSVVFIDELDAVGRER--GLIKGSGGQERDATLNQLLVCLDGF 529
GA R+R L+ A+ APS+VFIDE+DA+G +R G + G+G +E D TLNQLLV +DGF
Sbjct: 225 QGAKRIRQLFAHARSVAPSIVFIDEIDAIGGKRSSGSVNGAGQREHDQTLNQLLVEMDGF 284
Query: 530 EGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARK-KPMADDV 588
+++ I +TNR D LD AL+RPGRFDR +++P P + GR +IL+++ +K K
Sbjct: 285 SNTVHIMVIGATNRIDTLDSALLRPGRFDRIVYVPLPDINGRKKILEIYIKKIKSDLKLE 344
Query: 589 DYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSS 648
D +A +T G GA+L N+V A I R+ ++ +T ++L +A G + R S
Sbjct: 345 DIEKIARLTPGFSGADLENVVNEATILATRNNKSLVTINELYEARDKVSMGPERKSLRQS 404
Query: 649 ETWRQV-AINEAAMAVVAVNF-PDLKNIEFVTIAPRAGRELGYV-RMKMD--HMKFKEGM 703
+ R++ A +EA A+VA P I TI R G LGYV ++ +D H FK M
Sbjct: 405 DHQRRITAYHEAGHAIVAYFLQPKTDPIHKATIISR-GNALGYVEQIPVDDRHNYFKSQM 463
Query: 704 LSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFVLG-GLSDK---- 758
++ + V + R A+E+ G+ + S+ + A A V G+SDK
Sbjct: 464 EAK------LAVCMGGRTAEEIVFGKSETSSGASSDISRATEIAYKMVTEWGMSDKLGPL 517
Query: 759 ----HFG---LSNFWVADRINEIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKK 811
G SN A ++ I+ E ++ ++EIL+R+R LD + L++K+
Sbjct: 518 NYKKRMGDGYSSNRLSAQTVSSIEVEVKSLVEKGKSLSEEILRRHRKELDNLAFALLDKE 577
Query: 812 SLTKQEFFHLVELHGS 827
+L+ +E ++++ + S
Sbjct: 578 TLSGEEIKNIIDPNNS 593
>UNIPROTKB|F1NTK8 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 EMBL:AADN02000548 IPI:IPI00601077
Ensembl:ENSGALT00000012112 Uniprot:F1NTK8
Length = 712
Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
Identities = 146/384 (38%), Positives = 215/384 (55%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+AVAGEA V F+ S S+F E++VGVGASR+RSL++EAK NAP V+FIDELD+VG
Sbjct: 324 KTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRSLFREAKANAPCVIFIDELDSVG 383
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R I+ T+NQLL +DGF+ V+ I +TN P+ LD AL+RPGRFD ++
Sbjct: 384 GKR--IESPMHPYSRQTINQLLAEMDGFKPNEGVVIIGATNFPEALDNALIRPGRFDMQV 441
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
+PKP + GR EILK + K VD +A T G GAEL N+V AA+ DG+
Sbjct: 442 TVPKPDVRGRTEILKWYLNKIKYDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGK 501
Query: 622 TEITTDDLLQAAQIEERGMLDRKERSSETWRQV-AINEAAMAVVAVNFPDLKNIEFVTIA 680
+T +L + G R E + + A +E+ A++A D I TI
Sbjct: 502 DMVTMKELEFSKDKILMGPERRSVEIDEKNKTITAYHESGHAIIAYYTKDAMPINKATIM 561
Query: 681 PRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETA 740
R G LG+V + ++ ++ E +R LL + V + RAA+EL G ++T +
Sbjct: 562 TR-GTTLGHVSLLPENDRWSE---TRSQLLAQMDVCMGGRAAEELIFGSDHITTGASSDF 617
Query: 741 DNARSAARTFVLG-GLSDKHFGLSNFWVADRINE-----IDTEALRILNLCYERAKEILQ 794
DNA A+ V G+S+K G+ + +++ I+ E +L YERAK IL+
Sbjct: 618 DNATKIAKLMVTRFGMSEK-LGVMTYTDTGKVSPETQSAIEQEVRTLLRDSYERAKNILK 676
Query: 795 ----RNRNLLDAVVN-ELVEKKSL 813
++NL +A++ E ++ K +
Sbjct: 677 THAKEHKNLAEALLKYETLDAKEI 700
>UNIPROTKB|F1P519 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005743 GO:GO:0008283 GO:GO:0004222
GO:GO:0006515 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
GeneTree:ENSGT00550000074836 OMA:HTSHVSA EMBL:AADN02000548
IPI:IPI00822340 Ensembl:ENSGALT00000038444 Uniprot:F1P519
Length = 717
Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
Identities = 146/384 (38%), Positives = 215/384 (55%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+AVAGEA V F+ S S+F E++VGVGASR+RSL++EAK NAP V+FIDELD+VG
Sbjct: 329 KTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRSLFREAKANAPCVIFIDELDSVG 388
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R I+ T+NQLL +DGF+ V+ I +TN P+ LD AL+RPGRFD ++
Sbjct: 389 GKR--IESPMHPYSRQTINQLLAEMDGFKPNEGVVIIGATNFPEALDNALIRPGRFDMQV 446
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
+PKP + GR EILK + K VD +A T G GAEL N+V AA+ DG+
Sbjct: 447 TVPKPDVRGRTEILKWYLNKIKYDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGK 506
Query: 622 TEITTDDLLQAAQIEERGMLDRKERSSETWRQV-AINEAAMAVVAVNFPDLKNIEFVTIA 680
+T +L + G R E + + A +E+ A++A D I TI
Sbjct: 507 DMVTMKELEFSKDKILMGPERRSVEIDEKNKTITAYHESGHAIIAYYTKDAMPINKATIM 566
Query: 681 PRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETA 740
R G LG+V + ++ ++ E +R LL + V + RAA+EL G ++T +
Sbjct: 567 TR-GTTLGHVSLLPENDRWSE---TRSQLLAQMDVCMGGRAAEELIFGSDHITTGASSDF 622
Query: 741 DNARSAARTFVLG-GLSDKHFGLSNFWVADRINE-----IDTEALRILNLCYERAKEILQ 794
DNA A+ V G+S+K G+ + +++ I+ E +L YERAK IL+
Sbjct: 623 DNATKIAKLMVTRFGMSEK-LGVMTYTDTGKVSPETQSAIEQEVRTLLRDSYERAKNILK 681
Query: 795 ----RNRNLLDAVVN-ELVEKKSL 813
++NL +A++ E ++ K +
Sbjct: 682 THAKEHKNLAEALLKYETLDAKEI 705
>RGD|1309722 [details] [associations]
symbol:Afg3l1 "AFG3(ATPase family gene 3)-like 1 (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=ISO] [GO:0008053 "mitochondrial fusion"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=ISO] [GO:0042407
"cristae formation" evidence=ISO] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1309722
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
IPI:IPI00365343 Ensembl:ENSRNOT00000065957 UCSC:RGD:1309722
ArrayExpress:F1LS61 Uniprot:F1LS61
Length = 761
Score = 535 (193.4 bits), Expect = 4.9e-52, Sum P(2) = 4.9e-52
Identities = 147/403 (36%), Positives = 228/403 (56%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKA AGEA V F +++ S+F+E++VGVG +RVR ++ A+ +AP ++FIDE+DA+G
Sbjct: 318 KTLLAKATAGEAKVPFITVNGSEFLEMFVGVGPARVRDMFAMARKHAPCILFIDEIDAIG 377
Query: 502 RERGLIKGS-GGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDR 559
R+RG +G GGQ E++ TLNQ+LV +DGF NV+ +A TNRPDILDPAL RPGRFDR
Sbjct: 378 RKRG--RGHLGGQSEQENTLNQMLVEMDGFNSTTNVVVLAGTNRPDILDPALTRPGRFDR 435
Query: 560 KIFIPKPGLIGRMEILKVHARKKPMADDV--DYLA--VASMTDGMVGAELANIVEVAAIN 615
+I+I P + GR I KVH R + + + D L+ +A++T G GA+++N+ AA+
Sbjct: 436 QIYIGPPDIKGRSSIFKVHLRPLKLDESLTRDALSRKLAALTPGFTGADISNVCNEAALI 495
Query: 616 MMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQ--VAINEAAMAVVAVNFPDLKN 673
R + QA + G L++K + + + VA +EA AVV
Sbjct: 496 AARHLSPSVQERHFEQAIE-RVIGGLEKKTQVLQPSEKTTVAYHEAGHAVVGWFLEHADP 554
Query: 674 IEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLS 733
+ V+I PR G+ LGY + ++ ++ + +R+ L D + + L R A++L+ G Q++
Sbjct: 555 LLKVSIIPR-GKGLGYAQ----YLPREQYLYTREQLFDRMCMMLGGRVAEQLFFG--QIT 607
Query: 734 T-IWAETADNARSAARTFVLGGLSDKHFGLSNF--------WVADRINE-----IDTEAL 779
T + +SA V G+S+K G +F V +E ID E
Sbjct: 608 TGAQDDLRKVTQSAYAQIVQFGMSEK-LGQVSFDFPRQGETMVEKPYSEATAQLIDEEVR 666
Query: 780 RILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLV 822
++ Y R E+L + R ++ V L+EK+ L K + L+
Sbjct: 667 CLVRSAYNRTLELLTQCREQVEKVGRRLLEKEVLEKADMIELL 709
Score = 37 (18.1 bits), Expect = 4.9e-52, Sum P(2) = 4.9e-52
Identities = 6/19 (31%), Positives = 13/19 (68%)
Query: 402 GKGLPQYLERGVDVKFSDM 420
G+ + L+ +DV+F+D+
Sbjct: 256 GETTAKILKNNIDVRFADV 274
>ZFIN|ZDB-GENE-070410-25 [details] [associations]
symbol:yme1l1b "YME1-like 1b" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-070410-25 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 KO:K08955
MEROPS:M41.A20 HOVERGEN:HBG057127 EMBL:BC139529 IPI:IPI00614293
RefSeq:NP_001082983.1 UniGene:Dr.148676 ProteinModelPortal:A4QNU8
SMR:A4QNU8 STRING:A4QNU8 GeneID:557907 KEGG:dre:557907 CTD:557907
InParanoid:A4QNU8 NextBio:20882221 Uniprot:A4QNU8
Length = 722
Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
Identities = 146/387 (37%), Positives = 224/387 (57%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+AVAGEA V F+ S S+F E++VGVGASR+R+L++EAK NAP V+FIDELD+VG
Sbjct: 334 KTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKGNAPCVIFIDELDSVG 393
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R I+ T+NQLL +DGF+ VI I +TN P+ LD AL+RPGRFD ++
Sbjct: 394 GKR--IESPMHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQV 451
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
+P+P + GR EILK + +K + V+ +A T G GAEL N+V AA+ DG+
Sbjct: 452 TVPRPDVKGRTEILKWYLKKIKVDSAVEAEVIARGTVGFSGAELENLVNQAALKAAVDGK 511
Query: 622 TEITTDDLLQAAQIEERGMLDRKERSSETWRQ----VAINEAAMAVVAVNFPDLKNIEFV 677
+T +L A +++ ++ + RS+E ++ A +E+ A++A D I
Sbjct: 512 DMVTMKELEFA---KDKILMGPERRSAEIDKRNKEITAYHESGHAIIAYYTKDAMPINKA 568
Query: 678 TIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWA 737
TI PR G LG+V M ++ ++ E +R LL + V + R A+EL G ++T +
Sbjct: 569 TIMPR-GPTLGHVSMLPENDRWSE---TRAQLLAQMDVSMGGRVAEELIFGNENITTGAS 624
Query: 738 ETADNARSAARTFVLG-GLSDKHFGLSNFW-VADRINE----IDTEALRILNLCYERAKE 791
D+A A+ V G+S+K G+ + + + E I+ E +L YERAK
Sbjct: 625 SDFDSATKIAKMMVTRFGMSEK-LGVMTYSDLTKQSPETQAAIEHEVRILLRDSYERAKA 683
Query: 792 ILQ----RNRNLLDAVVN-ELVEKKSL 813
+L+ +RNL +A++ E ++ K +
Sbjct: 684 LLKSRAKEHRNLAEALLRYETLDAKEI 710
>MGI|MGI:1351651 [details] [associations]
symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0006515
"misfolded or incompletely synthesized protein catabolic process"
evidence=ISO] [GO:0007005 "mitochondrion organization"
evidence=ISO] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008283
"cell proliferation" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
MGI:MGI:1351651 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008283 GO:GO:0004222 GO:GO:0006515
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
HOGENOM:HOG000217276 GeneTree:ENSGT00550000074836 KO:K08955
CTD:10730 HOVERGEN:HBG057127 OMA:HTSHVSA EMBL:AF090430
EMBL:AY136286 EMBL:AY136287 EMBL:AK079175 EMBL:BC007128
IPI:IPI00136555 RefSeq:NP_038799.1 UniGene:Mm.23335
ProteinModelPortal:O88967 SMR:O88967 STRING:O88967
PhosphoSite:O88967 PaxDb:O88967 PRIDE:O88967
Ensembl:ENSMUST00000028117 GeneID:27377 KEGG:mmu:27377
InParanoid:O88967 OrthoDB:EOG4KH2TK NextBio:305300 Bgee:O88967
CleanEx:MM_YME1L1 Genevestigator:O88967
GermOnline:ENSMUSG00000026775 Uniprot:O88967
Length = 715
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 145/387 (37%), Positives = 220/387 (56%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+AVAGEA V F+ S S+F E++VGVGASR+R+L++EAK NAP V+FIDELD+VG
Sbjct: 327 KTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVG 386
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R I+ T+NQLL +DGF+ VI I +TN P+ LD AL+RPGRFD ++
Sbjct: 387 GKR--IESPMHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQV 444
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
+P+P + GR EILK + K VD +A T G GAEL N+V AA+ DG+
Sbjct: 445 TVPRPDVKGRTEILKWYLNKIKFDKSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGK 504
Query: 622 TEITTDDLLQAAQIEERGMLDRKERSSETWRQ----VAINEAAMAVVAVNFPDLKNIEFV 677
+T +L + +++ ++ + RS E + A +E+ A++A D I
Sbjct: 505 EMVTMKELEFS---KDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKA 561
Query: 678 TIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWA 737
TI PR G LG+V + ++ ++ E +R LL + V + R A+EL G ++T +
Sbjct: 562 TIMPR-GPTLGHVSLLPENDRWNE---TRAQLLAQMDVSMGGRVAEELIFGTDHITTGAS 617
Query: 738 ETADNARSAARTFVLG-GLSDKHFGLSNFWVADRINE-----IDTEALRILNLCYERAKE 791
DNA A+ V G+S+K G+ + +++ I+ E +L YERAK
Sbjct: 618 SDFDNATKIAKRMVTKFGMSEK-LGVMTYSDTGKLSPETQSAIEQEIRILLRESYERAKH 676
Query: 792 ILQ----RNRNLLDAVVN-ELVEKKSL 813
IL+ ++NL +A++ E ++ K +
Sbjct: 677 ILKTHAKEHKNLAEALLTYETLDAKEI 703
>UNIPROTKB|G3V886 [details] [associations]
symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382 RGD:620764
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 KO:K08955 MEROPS:M41.A20 OMA:HTSHVSA
UniGene:Rn.8153 EMBL:CH474100 RefSeq:XP_003751780.1
Ensembl:ENSRNOT00000023395 GeneID:100910779 KEGG:rno:100910779
Uniprot:G3V886
Length = 715
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 145/387 (37%), Positives = 220/387 (56%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+AVAGEA V F+ S S+F E++VGVGASR+R+L++EAK NAP V+FIDELD+VG
Sbjct: 327 KTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVG 386
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R I+ T+NQLL +DGF+ VI I +TN P+ LD AL+RPGRFD ++
Sbjct: 387 GKR--IESPMHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQV 444
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
+P+P + GR EILK + K VD +A T G GAEL N+V AA+ DG+
Sbjct: 445 TVPRPDVKGRTEILKWYLNKIKFDKSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGK 504
Query: 622 TEITTDDLLQAAQIEERGMLDRKERSSETWRQ----VAINEAAMAVVAVNFPDLKNIEFV 677
+T +L + +++ ++ + RS E + A +E+ A++A D I
Sbjct: 505 EMVTMKELEFS---KDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKA 561
Query: 678 TIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWA 737
TI PR G LG+V + ++ ++ E +R LL + V + R A+EL G ++T +
Sbjct: 562 TIMPR-GPTLGHVSLLPENDRWNE---TRAQLLAQMDVSMGGRVAEELIFGTDHITTGAS 617
Query: 738 ETADNARSAARTFVLG-GLSDKHFGLSNFWVADRINE-----IDTEALRILNLCYERAKE 791
DNA A+ V G+S+K G+ + +++ I+ E +L YERAK
Sbjct: 618 SDFDNATKIAKRMVTKFGMSEK-LGVMTYSDTGKLSPETQSAIEQEIRILLRESYERAKH 676
Query: 792 ILQ----RNRNLLDAVVN-ELVEKKSL 813
IL+ ++NL +A++ E ++ K +
Sbjct: 677 ILKTHAKEHKNLAEALLTYETLDAKEI 703
>GENEDB_PFALCIPARUM|PF14_0616 [details] [associations]
symbol:PF14_0616 "i-AAA protease, putative"
species:5833 "Plasmodium falciparum" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
EMBL:AE014187 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 HSSP:Q9LCZ4 RefSeq:XP_001348790.1
ProteinModelPortal:Q8IKI9 SMR:Q8IKI9 PRIDE:Q8IKI9
EnsemblProtists:PF14_0616:mRNA GeneID:812198 KEGG:pfa:PF14_0616
EuPathDB:PlasmoDB:PF3D7_1464900 OMA:HMENVET ProtClustDB:CLSZ2434669
Uniprot:Q8IKI9
Length = 706
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 149/422 (35%), Positives = 224/422 (53%)
Query: 407 QYLERGVD-VKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQF 465
Q LE +D +K SD + + G + KTL+A+A+AGEA V F S S+F
Sbjct: 264 QELEEIIDYLKNSDKFTKIGAKLPKGILLSGEPGTGKTLIARAIAGEANVPFLQASGSEF 323
Query: 466 VEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVC 525
E++VGVGA R+R L+Q AK +AP +VFIDE+DAVG +R S + TLNQLLV
Sbjct: 324 EEMFVGVGARRIRELFQAAKKHAPCIVFIDEIDAVGSKRSSRDNSAVR---MTLNQLLVE 380
Query: 526 LDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMA 585
LDGFE ++ I +TN P LD ALVRPGR D+ I +P P + GR EILK+++ K ++
Sbjct: 381 LDGFEQNEGIVVICATNFPQSLDKALVRPGRLDKTIVVPLPDIKGRYEILKMYSNKIVLS 440
Query: 586 DDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKE 645
DVD ++ T GM GA+L NI+ +AAI +G+ + + + QA G L RK
Sbjct: 441 KDVDLHVLSRRTVGMTGADLNNILNIAAIKCSVEGKKSVDMNSIEQAFDRVVVG-LQRKS 499
Query: 646 RSSETWRQV-AINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHM-KFKEGM 703
+E + + A +E +V + TI PR G LG V K+ K+ + +
Sbjct: 500 PLNEEEKNITAYHEGGHTLVNFYTKGSDPVHKATIMPR-GMSLG-VTWKIPISDKYSQKI 557
Query: 704 LSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFVLG-GLSDKHFGL 762
QS +D + + ++E+ G+ ++T + A A++ V+ G+ +
Sbjct: 558 KDVQSEID---ILMGGLVSEEIIFGKNNVTTGCSSDLQKATHIAQSLVMNYGVGINEDNI 614
Query: 763 SNFWVADRIN-------EIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTK 815
S F + D+ N +ID RIL Y RAK +L ++ + L + + LVE ++LT
Sbjct: 615 SMF-LHDKQNISEEMKIKIDKSIQRILLDSYNRAKNVLNQHIDELHRIASALVEYETLTS 673
Query: 816 QE 817
E
Sbjct: 674 DE 675
>UNIPROTKB|Q8IKI9 [details] [associations]
symbol:PF14_0616 "ATP-dependent protease la, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
EMBL:AE014187 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 HSSP:Q9LCZ4 RefSeq:XP_001348790.1
ProteinModelPortal:Q8IKI9 SMR:Q8IKI9 PRIDE:Q8IKI9
EnsemblProtists:PF14_0616:mRNA GeneID:812198 KEGG:pfa:PF14_0616
EuPathDB:PlasmoDB:PF3D7_1464900 OMA:HMENVET ProtClustDB:CLSZ2434669
Uniprot:Q8IKI9
Length = 706
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 149/422 (35%), Positives = 224/422 (53%)
Query: 407 QYLERGVD-VKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQF 465
Q LE +D +K SD + + G + KTL+A+A+AGEA V F S S+F
Sbjct: 264 QELEEIIDYLKNSDKFTKIGAKLPKGILLSGEPGTGKTLIARAIAGEANVPFLQASGSEF 323
Query: 466 VEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVC 525
E++VGVGA R+R L+Q AK +AP +VFIDE+DAVG +R S + TLNQLLV
Sbjct: 324 EEMFVGVGARRIRELFQAAKKHAPCIVFIDEIDAVGSKRSSRDNSAVR---MTLNQLLVE 380
Query: 526 LDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMA 585
LDGFE ++ I +TN P LD ALVRPGR D+ I +P P + GR EILK+++ K ++
Sbjct: 381 LDGFEQNEGIVVICATNFPQSLDKALVRPGRLDKTIVVPLPDIKGRYEILKMYSNKIVLS 440
Query: 586 DDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKE 645
DVD ++ T GM GA+L NI+ +AAI +G+ + + + QA G L RK
Sbjct: 441 KDVDLHVLSRRTVGMTGADLNNILNIAAIKCSVEGKKSVDMNSIEQAFDRVVVG-LQRKS 499
Query: 646 RSSETWRQV-AINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHM-KFKEGM 703
+E + + A +E +V + TI PR G LG V K+ K+ + +
Sbjct: 500 PLNEEEKNITAYHEGGHTLVNFYTKGSDPVHKATIMPR-GMSLG-VTWKIPISDKYSQKI 557
Query: 704 LSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFVLG-GLSDKHFGL 762
QS +D + + ++E+ G+ ++T + A A++ V+ G+ +
Sbjct: 558 KDVQSEID---ILMGGLVSEEIIFGKNNVTTGCSSDLQKATHIAQSLVMNYGVGINEDNI 614
Query: 763 SNFWVADRIN-------EIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTK 815
S F + D+ N +ID RIL Y RAK +L ++ + L + + LVE ++LT
Sbjct: 615 SMF-LHDKQNISEEMKIKIDKSIQRILLDSYNRAKNVLNQHIDELHRIASALVEYETLTS 673
Query: 816 QE 817
E
Sbjct: 674 DE 675
>UNIPROTKB|A6QR12 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008283 "cell proliferation" evidence=ISS] [GO:0005743
"mitochondrial inner membrane" evidence=ISS] [GO:0007005
"mitochondrion organization" evidence=ISS] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0005743
GO:GO:0008283 GO:GO:0004222 GO:GO:0006515 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005 HOGENOM:HOG000217276
GeneTree:ENSGT00550000074836 KO:K08955 MEROPS:M41.A20 CTD:10730
HOVERGEN:HBG057127 OMA:HTSHVSA OrthoDB:EOG4KH2TK EMBL:DAAA02035354
EMBL:BC150071 IPI:IPI00866889 RefSeq:NP_001095320.1 UniGene:Bt.1786
SMR:A6QR12 STRING:A6QR12 Ensembl:ENSBTAT00000021868 GeneID:505118
KEGG:bta:505118 InParanoid:A6QR12 NextBio:20866987 Uniprot:A6QR12
Length = 717
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 145/389 (37%), Positives = 222/389 (57%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+AVAGEA V F+ S S+F E++VGVGASR+R+L++EAK NAP V+FIDELD+VG
Sbjct: 327 KTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVG 386
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R I+ T+NQLL +DGF+ VI I +TN P+ LD AL+RPGRFD ++
Sbjct: 387 GKR--IESPMHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQV 444
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
+P+P + GR EILK + K VD +A T G GAEL N+V AA+ DG+
Sbjct: 445 TVPRPDVKGRTEILKWYLNKIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGK 504
Query: 622 TEITTDDLLQAAQIEERGMLDRKERSSETWRQ----VAINEAAMAVVAVNFPDLKNIEFV 677
+T +L + +++ ++ + RS E + A +E+ A++A D I
Sbjct: 505 EMVTMKELEFS---KDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKA 561
Query: 678 TIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWA 737
TI PR G LG+V + ++ ++ E +R LL + V + R A+EL G ++T +
Sbjct: 562 TIMPR-GPTLGHVSLLPENDRWNE---TRAQLLAQMDVSMGGRVAEELIFGSDHITTGYC 617
Query: 738 ETAD--NARSAARTFVLG-GLSDKHFGLSNFWVADRINE-----IDTEALRILNLCYERA 789
++D NA A+ V G+S+K G+ + +++ I+ E +L YERA
Sbjct: 618 ASSDFDNATKIAKRMVTKFGMSEK-LGVMTYSDTGKLSPETQSAIEQEIRILLRDSYERA 676
Query: 790 KEILQ----RNRNLLDAVVN-ELVEKKSL 813
K IL+ ++NL +A++ E ++ K +
Sbjct: 677 KHILKTHAKEHKNLAEALLTYETLDAKEI 705
>MGI|MGI:1928277 [details] [associations]
symbol:Afg3l1 "AFG3(ATPase family gene 3)-like 1 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=ISA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IGI] [GO:0008053 "mitochondrial fusion" evidence=IGI]
[GO:0008152 "metabolic process" evidence=ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IGI] [GO:0042407 "cristae formation" evidence=IGI]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1928277
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GO:GO:0031966
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 EMBL:AK012394 EMBL:AK159647 EMBL:AK167964
EMBL:AK168244 EMBL:BC056978 EMBL:AF329695 IPI:IPI00468514
IPI:IPI00652659 RefSeq:NP_473411.2 UniGene:Mm.287475
ProteinModelPortal:Q920A7 SMR:Q920A7 IntAct:Q920A7 STRING:Q920A7
MEROPS:M41.016 PhosphoSite:Q920A7 PaxDb:Q920A7 PRIDE:Q920A7
Ensembl:ENSMUST00000001520 Ensembl:ENSMUST00000098320 GeneID:114896
KEGG:mmu:114896 UCSC:uc009nwd.2 CTD:114896 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 InParanoid:Q920A7 KO:K08956 OMA:WDEKDFR
OrthoDB:EOG4SBDXC NextBio:368917 Bgee:Q920A7 CleanEx:MM_AFG3L1
Genevestigator:Q920A7 GermOnline:ENSMUSG00000031967 GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
Uniprot:Q920A7
Length = 789
Score = 534 (193.0 bits), Expect = 3.8e-51, Sum P(2) = 3.8e-51
Identities = 147/403 (36%), Positives = 227/403 (56%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKA AGEA V F +++ S+F+E++VGVG +RVR ++ A+ +AP ++FIDE+DA+G
Sbjct: 346 KTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDMFAMARKHAPCILFIDEIDAIG 405
Query: 502 RERGLIKGS-GGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDR 559
R+RG +G GGQ E++ TLNQ+LV +DGF NV+ +A TNRPDILDPAL RPGRFDR
Sbjct: 406 RKRG--RGHLGGQSEQENTLNQMLVEMDGFNSSTNVVVLAGTNRPDILDPALTRPGRFDR 463
Query: 560 KIFIPKPGLIGRMEILKVHARKKPMADDV--DYLA--VASMTDGMVGAELANIVEVAAIN 615
+I+I P + GR I KVH R + + D L+ +A++T G GA+++N+ AA+
Sbjct: 464 QIYIGPPDIKGRSSIFKVHLRPLKLDGSLSKDALSRKLAALTPGFTGADISNVCNEAALI 523
Query: 616 MMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQ--VAINEAAMAVVAVNFPDLKN 673
R + QA + G L++K + + + VA +EA AVV
Sbjct: 524 AARHLSPSVQERHFEQAIE-RVIGGLEKKTQVLQPSEKTTVAYHEAGHAVVGWFLEHADP 582
Query: 674 IEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLS 733
+ V+I PR G+ LGY + ++ ++ + +R+ L D + + L R A++L+ G Q++
Sbjct: 583 LLKVSIIPR-GKGLGYAQ----YLPREQFLYTREQLFDRMCMMLGGRVAEQLFFG--QIT 635
Query: 734 T-IWAETADNARSAARTFVLGGLSDKHFGLSNF--------WVADRINE-----IDTEAL 779
T + +SA V G+S+K G +F V +E ID E
Sbjct: 636 TGAQDDLRKVTQSAYAQIVQFGMSEK-LGQVSFDFPRQGETMVEKPYSEATAQLIDEEVR 694
Query: 780 RILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLV 822
++ Y R E+L + R ++ V L+EK+ L K + L+
Sbjct: 695 CLVRSAYNRTLELLTQCREQVEKVGRRLLEKEVLEKADMIELL 737
Score = 37 (18.1 bits), Expect = 3.8e-51, Sum P(2) = 3.8e-51
Identities = 6/19 (31%), Positives = 13/19 (68%)
Query: 402 GKGLPQYLERGVDVKFSDM 420
G+ + L+ +DV+F+D+
Sbjct: 284 GETTAKILKNNIDVRFADV 302
>UNIPROTKB|E1BFQ0 [details] [associations]
symbol:E1BFQ0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042407 "cristae formation" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 OMA:WDEKDFR GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:DAAA02046282 IPI:IPI00707325 Ensembl:ENSBTAT00000056979
Uniprot:E1BFQ0
Length = 802
Score = 537 (194.1 bits), Expect = 8.2e-51, P = 8.2e-51
Identities = 150/408 (36%), Positives = 231/408 (56%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKA AGEAGV F +++ S+F+E++VGVG +RVR ++ A+ NAP ++F+DE+DA+G
Sbjct: 349 KTLLAKATAGEAGVPFITVNGSEFLEMFVGVGPARVRDMFALARKNAPCILFVDEIDAIG 408
Query: 502 RERGLIKGS-GGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDR 559
R+RG +G GGQ E++ TLNQLLV +DGF NV+ +A TNRPD+LDPAL+RPGRFDR
Sbjct: 409 RKRG--RGHFGGQSEQENTLNQLLVEMDGFNSTTNVVVLAGTNRPDVLDPALMRPGRFDR 466
Query: 560 KIFIPKPGLIGRMEILKVHARKKPMADDV--DYLA--VASMTDGMVG--AELANIVEVAA 613
+I+I P + GR I +VH R + + + D LA +A++T G G A+++N+ AA
Sbjct: 467 QIYIGPPDIKGRSSIFRVHLRPLKLDESLSKDALARKLAALTPGFTGSGADISNVCNEAA 526
Query: 614 INMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQ--VAINEAAMAVVAVNFPDL 671
+ R + QA + G L++K + + + VA +EA AVV
Sbjct: 527 LIAARHLNPSVGEKHFEQAIE-RVIGGLEKKTQVLQPGEKMTVAYHEAGHAVVGWFLEHA 585
Query: 672 KNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQ 731
+ V+I PR G+ LGY + + ++ + +R+ L D + L R A++L+ G +
Sbjct: 586 DPLLKVSIVPR-GKGLGYAQC----LPREQYLYTREQLFDRMCAMLGGRVAEQLFFG--R 638
Query: 732 LST-IWAETADNARSAARTFVLGGLSDK----HFGL---SNFWVADRINE-----IDTEA 778
++T + +SA V G+S+K F L V +E ID E
Sbjct: 639 VTTGAQDDLRKVTQSAYAQIVQFGMSEKLGQVSFDLPRPGEALVEKPFSEATAQLIDEEV 698
Query: 779 LRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLVELHG 826
R++ + R ++L R R +D V L+EK+ L + + +VEL G
Sbjct: 699 RRLIGSAHARTLDLLTRCREQVDKVGRRLLEKEVLERAD---MVELLG 743
>UNIPROTKB|F1PRV6 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 OMA:HTSHVSA EMBL:AAEX03001169
Ensembl:ENSCAFT00000007090 Uniprot:F1PRV6
Length = 748
Score = 534 (193.0 bits), Expect = 1.1e-50, P = 1.1e-50
Identities = 145/387 (37%), Positives = 220/387 (56%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+AVAGEA V F+ S S+F E++VGVGASR+R+L++EAK NAP V+FIDELD+VG
Sbjct: 361 KTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVG 420
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R I+ T+NQLL +DGF+ VI I +TN P+ LD AL+RPGRFD ++
Sbjct: 421 GKR--IESPMHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQV 478
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
+P+P + GR EILK + K VD +A T G GAEL N+V AA+ DG+
Sbjct: 479 TVPRPDVKGRTEILKWYLNKIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGK 538
Query: 622 TEITTDDLLQAAQIEERGMLDRKERSSETWRQ----VAINEAAMAVVAVNFPDLKNIEFV 677
+T +L + +++ ++ + RS E + A +E+ A++A D I
Sbjct: 539 EMVTMKELEFS---KDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKA 595
Query: 678 TIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWA 737
TI PR G LG+V + ++ ++ E +R LL + V + R A+EL G ++T +
Sbjct: 596 TIMPR-GPTLGHVSLLPENDRWNE---TRAQLLAQMDVSMGGRVAEELIFGTDHITTGAS 651
Query: 738 ETADNARSAARTFVLG-GLSDKHFGLSNFWVADRINE-----IDTEALRILNLCYERAKE 791
DNA A+ V G+S+K G+ + +++ I+ E +L YERAK
Sbjct: 652 SDFDNATKIAKRMVTKFGMSEK-LGVMTYSDTGKLSPETQSAIEQEIRILLRDSYERAKH 710
Query: 792 ILQ----RNRNLLDAVVN-ELVEKKSL 813
IL+ ++NL +A++ E ++ K +
Sbjct: 711 ILKTHAKEHKNLAEALLTYETLDAKEI 737
>UNIPROTKB|F1RVK1 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008283 "cell proliferation" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0005743
GO:GO:0008283 GO:GO:0004222 GO:GO:0006515 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 GeneTree:ENSGT00550000074836
OMA:HTSHVSA EMBL:FP016148 Ensembl:ENSSSCT00000012110 Uniprot:F1RVK1
Length = 768
Score = 534 (193.0 bits), Expect = 2.0e-50, P = 2.0e-50
Identities = 145/387 (37%), Positives = 220/387 (56%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+AVAGEA V F+ S S+F E++VGVGASR+R+L++EAK NAP V+FIDELD+VG
Sbjct: 380 KTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVG 439
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R I+ T+NQLL +DGF+ VI I +TN P+ LD AL+RPGRFD ++
Sbjct: 440 GKR--IESPMHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQV 497
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
+P+P + GR EILK + K VD +A T G GAEL N+V AA+ DG+
Sbjct: 498 TVPRPDVKGRTEILKWYLNKIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGK 557
Query: 622 TEITTDDLLQAAQIEERGMLDRKERSSETWRQ----VAINEAAMAVVAVNFPDLKNIEFV 677
+T +L + +++ ++ + RS E + A +E+ A++A D I
Sbjct: 558 EMVTMKELEFS---KDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKA 614
Query: 678 TIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWA 737
TI PR G LG+V + ++ ++ E +R LL + V + R A+EL G ++T +
Sbjct: 615 TIMPR-GPTLGHVSLLPENDRWNE---TRAQLLAQMDVSMGGRVAEELIFGTDHITTGAS 670
Query: 738 ETADNARSAARTFVLG-GLSDKHFGLSNFWVADRINE-----IDTEALRILNLCYERAKE 791
DNA A+ V G+S+K G+ + +++ I+ E +L YERAK
Sbjct: 671 SDFDNATKIAKRMVTKFGMSEK-LGVMTYSDTGKLSPETQSAIEQEIRILLRDSYERAKH 729
Query: 792 ILQ----RNRNLLDAVVN-ELVEKKSL 813
IL+ ++NL +A++ E ++ K +
Sbjct: 730 ILKTHAKEHKNLAEALLTYETLDAKEI 756
>UNIPROTKB|Q96TA2 [details] [associations]
symbol:YME1L1 "ATP-dependent zinc metalloprotease YME1L1"
species:9606 "Homo sapiens" [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0007005 "mitochondrion organization"
evidence=IMP] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IMP] [GO:0008283 "cell
proliferation" evidence=IMP] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0005524 GO:GO:0016020 GO:GO:0005743
GO:GO:0046872 GO:GO:0008283 GO:GO:0006508 GO:GO:0004222
EMBL:CH471072 EMBL:AL160291 GO:GO:0030163 GO:GO:0006515
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
EMBL:AL162272 HOGENOM:HOG000217276 UniGene:Hs.74647 KO:K08955
EMBL:AF151782 EMBL:AJ132637 EMBL:AY358484 EMBL:AK297973
EMBL:BC023507 EMBL:BC024032 IPI:IPI00045946 IPI:IPI00099529
RefSeq:NP_001240795.1 RefSeq:NP_055078.1 RefSeq:NP_647473.1
UniGene:Hs.499145 ProteinModelPortal:Q96TA2 SMR:Q96TA2
IntAct:Q96TA2 STRING:Q96TA2 MEROPS:M41.A20 PhosphoSite:Q96TA2
DMDM:46397258 PaxDb:Q96TA2 PRIDE:Q96TA2 Ensembl:ENST00000326799
Ensembl:ENST00000375972 Ensembl:ENST00000376016 GeneID:10730
KEGG:hsa:10730 UCSC:uc001iti.3 UCSC:uc001itj.3 CTD:10730
GeneCards:GC10M027439 H-InvDB:HIX0127242 HGNC:HGNC:12843 MIM:607472
neXtProt:NX_Q96TA2 PharmGKB:PA37434 HOVERGEN:HBG057127
InParanoid:Q96TA2 OMA:HTSHVSA PhylomeDB:Q96TA2 ChiTaRS:YME1L1
GenomeRNAi:10730 NextBio:40734 ArrayExpress:Q96TA2 Bgee:Q96TA2
CleanEx:HS_YME1L1 Genevestigator:Q96TA2 GermOnline:ENSG00000136758
Uniprot:Q96TA2
Length = 773
Score = 534 (193.0 bits), Expect = 2.2e-50, P = 2.2e-50
Identities = 145/387 (37%), Positives = 220/387 (56%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+AVAGEA V F+ S S+F E++VGVGASR+R+L++EAK NAP V+FIDELD+VG
Sbjct: 385 KTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVG 444
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R I+ T+NQLL +DGF+ VI I +TN P+ LD AL+RPGRFD ++
Sbjct: 445 GKR--IESPMHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQV 502
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
+P+P + GR EILK + K VD +A T G GAEL N+V AA+ DG+
Sbjct: 503 TVPRPDVKGRTEILKWYLNKIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGK 562
Query: 622 TEITTDDLLQAAQIEERGMLDRKERSSETWRQ----VAINEAAMAVVAVNFPDLKNIEFV 677
+T +L + +++ ++ + RS E + A +E+ A++A D I
Sbjct: 563 EMVTMKELEFS---KDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKA 619
Query: 678 TIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWA 737
TI PR G LG+V + ++ ++ E +R LL + V + R A+EL G ++T +
Sbjct: 620 TIMPR-GPTLGHVSLLPENDRWNE---TRAQLLAQMDVSMGGRVAEELIFGTDHITTGAS 675
Query: 738 ETADNARSAARTFVLG-GLSDKHFGLSNFWVADRINE-----IDTEALRILNLCYERAKE 791
DNA A+ V G+S+K G+ + +++ I+ E +L YERAK
Sbjct: 676 SDFDNATKIAKRMVTKFGMSEK-LGVMTYSDTGKLSPETQSAIEQEIRILLRDSYERAKH 734
Query: 792 ILQ----RNRNLLDAVVN-ELVEKKSL 813
IL+ ++NL +A++ E ++ K +
Sbjct: 735 ILKTHAKEHKNLAEALLTYETLDAKEI 761
>UNIPROTKB|I3LLQ8 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0006508 GO:GO:0040014 GO:GO:0004222 GO:GO:0042552
GO:GO:0007409 GO:GO:0030163 GeneTree:ENSGT00530000063070
GO:GO:0017111 GO:GO:0042407 GO:GO:0008053 GO:GO:0034982
TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675
GO:GO:0060013 EMBL:FP565334 Ensembl:ENSSSCT00000025900
Uniprot:I3LLQ8
Length = 597
Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
Identities = 157/408 (38%), Positives = 225/408 (55%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKA AGEA V F ++S S+F+E++VGVG +RVR L+ A+ NAP ++FIDE+DAVG
Sbjct: 146 KTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVG 205
Query: 502 RERGLIKGS-GGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDR 559
R+RG +G+ GGQ E++ TLNQLLV +DGF NV+ +A TNRPDILDPAL+RPGRFDR
Sbjct: 206 RKRG--RGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDR 263
Query: 560 KIFIPKPGLIGRMEILKVHAR--KKPMADDVDYLA--VASMTDGMVGAELANIVEVAAIN 615
+IFI P + GR I KVH R K + + LA +AS+T G GA++AN+ AA+
Sbjct: 264 QIFIGPPDIKGRASIFKVHLRPLKLDSTLEKEKLARKLASLTPGFSGADVANVCNEAALI 323
Query: 616 MMRDGRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVAVNFPDLKN 673
R I QA + G L++K + E + VA +EA AV
Sbjct: 324 AARHLSDSINQKHFEQAIE-RVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADP 382
Query: 674 IEFVTIAPRAGRELGYVRM--KMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQ 731
+ V+I PR G+ LGY + K ++ KE +L R + PR + G+
Sbjct: 383 LLKVSIIPR-GKGLGYAQYLPKEQYLYTKEQLLDRMCMTPGWPC--GPRKSSF-----GR 434
Query: 732 LSTIWAETADNARSAARTFVLGGLSDKHFGLSNFWV---ADRINE----------IDTEA 778
++T + +SA V G+++K G +F + D + E ID E
Sbjct: 435 ITTGAQDDRKVTQSAYAQIVQFGMNEK-VGQISFDLPRQGDMVLEKPYSEATARLIDDEV 493
Query: 779 LRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLVELHG 826
++N Y+R +L + ++ V L+EK+ L K ++VEL G
Sbjct: 494 RILINDAYKRTVALLTEKKADVEKVALLLLEKEVLDKN---NMVELLG 538
>WB|WBGene00004978 [details] [associations]
symbol:spg-7 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008340 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0008270 GO:GO:0006508
GO:GO:0000003 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0030968
EMBL:FO081580 HSSP:Q9LCZ4 RefSeq:NP_491165.2
ProteinModelPortal:Q9N3T5 SMR:Q9N3T5 STRING:Q9N3T5 MEROPS:M41.A10
PaxDb:Q9N3T5 EnsemblMetazoa:Y47G6A.10 GeneID:171915
KEGG:cel:CELE_Y47G6A.10 UCSC:Y47G6A.10 CTD:171915
WormBase:Y47G6A.10 InParanoid:Q9N3T5 NextBio:873225 Uniprot:Q9N3T5
Length = 782
Score = 532 (192.3 bits), Expect = 5.6e-50, P = 5.6e-50
Identities = 149/427 (34%), Positives = 233/427 (54%)
Query: 415 VKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGA 474
+K Y+ G + KTLLAKA AGEA V F ++S S+F+E++VGVG
Sbjct: 312 LKNPQQYKDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGP 371
Query: 475 SRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQ-ERDATLNQLLVCLDGFE-GR 532
+RVR ++ A+ N+P ++FIDE+DAVGR+RG G GG E++ TLNQLLV +DGF
Sbjct: 372 ARVRDMFSMARKNSPCILFIDEIDAVGRKRGGKGGMGGHSEQENTLNQLLVEMDGFTTDE 431
Query: 533 GNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLA 592
+VI IA+TNR DILD AL+RPGRFDR+I++P P + GR I +VH + D L+
Sbjct: 432 SSVIVIAATNRVDILDSALLRPGRFDRQIYVPVPDIKGRASIFRVHLGPLRTSLDKTVLS 491
Query: 593 --VASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SS 648
+A+ T G GA+++N+ AA+ RD EI+ QA + GM ++K +
Sbjct: 492 RKLAAHTPGFSGADISNVCNEAALIAARDANHEISNKHFEQAIERVVAGM-EKKTQVLQK 550
Query: 649 ETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQS 708
E + VA +EA A+ + V+I PR G+ LGY + ++ ++ + S+
Sbjct: 551 EEKKTVAYHEAGHAIAGWFLQHADPLLKVSIIPR-GKGLGYAQ----YLPKEQYLYSKDQ 605
Query: 709 LLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFVLG-GLSDKHFGLSNFWV 767
LLD + + L R A+E++ G +++T + A + V+ G+S+K LS
Sbjct: 606 LLDRMCMTLGGRVAEEIFFG--RITTGAQDDLQKVTQMAYSQVVKFGMSEKVGPLSFETP 663
Query: 768 A------DR-INE-----IDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTK 815
A D+ +E ID E ++ R +++L R+ ++ V L+EK+ L +
Sbjct: 664 APGEMAFDKPYSEATAQLIDQEVRDLVMNALRRTRDLLLEKRSDIERVALRLLEKEILNR 723
Query: 816 QEFFHLV 822
++ LV
Sbjct: 724 EDMIELV 730
>WB|WBGene00010842 [details] [associations]
symbol:ymel-1 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 EMBL:Z49128 PIR:T23690
RefSeq:NP_499298.2 ProteinModelPortal:P54813 SMR:P54813
MEROPS:M41.A11 PaxDb:P54813 EnsemblMetazoa:M03C11.5.1
EnsemblMetazoa:M03C11.5.2 GeneID:176460 KEGG:cel:CELE_M03C11.5
UCSC:M03C11.5.1 CTD:176460 WormBase:M03C11.5
GeneTree:ENSGT00550000074836 InParanoid:P54813 OMA:KWNQYES
NextBio:892672 Uniprot:P54813
Length = 723
Score = 521 (188.5 bits), Expect = 5.5e-49, P = 5.5e-49
Identities = 149/455 (32%), Positives = 230/455 (50%)
Query: 409 LERGVD-VKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVE 467
+E VD +K + Y R G R KTLLA+A+AGEA V FF + S+F E
Sbjct: 260 VEEIVDYLKDPEKYSRLGGRLPKGVLLVGPPGTGKTLLARAIAGEAQVPFFHTAGSEFDE 319
Query: 468 IYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLD 527
+ VG GA RVR L+ +AK AP ++FIDE+D+VG +R + S + T+NQLL +D
Sbjct: 320 VLVGQGARRVRDLFDKAKARAPCIIFIDEIDSVGSKR--VSNSIHPYANQTINQLLSEMD 377
Query: 528 GFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADD 587
GF +I IA+TNR D LD AL+RPGRFD ++ +PKP L GR++I + K +
Sbjct: 378 GFTRNEGIIVIAATNRVDDLDKALLRPGRFDVRVTVPKPDLAGRVDIFNFYLSKIVHSGG 437
Query: 588 VDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER- 646
+D +A + G GA++ N+V AA+ D E+T L +A G R
Sbjct: 438 IDPKVLAKGSTGFTGADIENMVNQAALKAATDNAVEVTMAYLDEARDRVLMGPARTGGRI 497
Query: 647 -SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLS 705
E R A +EA +V++ D + VTI PR G+ LG+ M + ++ L+
Sbjct: 498 PDEEANRNTAYHEAGHTLVSLYTKDATPLHKVTIIPR-GQSLGHTAMLPEKDSYQ---LT 553
Query: 706 RQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFV-LGGLSDKHFGLSN 764
+ +L + V + R A+EL G+ +++T A+ A A V + G+SDK GL +
Sbjct: 554 KAQMLATLDVMMGGRVAEELIFGDDKVTTGAADDLSKATQLAVQMVKVFGMSDK-VGLRD 612
Query: 765 FWVAD------RINE--------IDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEK 810
F D ++++ ID E R+L Y+RAK IL+ + + L+E
Sbjct: 613 FTAQDNESALVKVSDLAPQTAELIDAEINRVLQESYKRAKVILETKKKEHQLLAEALLEY 672
Query: 811 KSLTKQEFFHLVELHGSLEPMPPSIVDIRAAKHSE 845
++L+ E ++ P P ++ K ++
Sbjct: 673 ETLSADEVKRVISGQKIKRPTPAAVKKSNETKRNQ 707
>CGD|CAL0000075 [details] [associations]
symbol:AFG3 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005745 "m-AAA complex"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 438 (159.2 bits), Expect = 6.5e-49, Sum P(3) = 6.5e-49
Identities = 88/171 (51%), Positives = 117/171 (68%)
Query: 421 YRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSL 480
Y + G + KTLLAKA AGEAGV F S+S S+FVE++VGVGASRVR L
Sbjct: 312 YEKLGAKIPRGAILSGPPGTGKTLLAKATAGEAGVPFLSVSGSEFVEMFVGVGASRVRDL 371
Query: 481 YQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIAS 540
++ A++ AP+++F+DE+DA+G+ERG + G ER+ TLNQLLV +DGF+ +V+ +A
Sbjct: 372 FKTAREMAPAIIFVDEIDAIGKERGNGRMGGNDERENTLNQLLVEMDGFDTTDHVVVLAG 431
Query: 541 TNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPM--ADDVD 589
TNRPDILD AL+RPGRFDR I I P + GR +I KVH K + D+D
Sbjct: 432 TNRPDILDKALLRPGRFDRHISIDVPDVEGRKQIFKVHLNKLKLKSVQDID 482
Score = 138 (53.6 bits), Expect = 6.5e-49, Sum P(3) = 6.5e-49
Identities = 65/266 (24%), Positives = 123/266 (46%)
Query: 586 DDVDYLA--VASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDR 643
++++ LA +A++T G GA++AN A+ R+ + T QA + G L++
Sbjct: 499 EEIEKLAGRLAALTPGFAGADIANCCNEGALIAAREDAPAVDTYHFEQAIERVIAG-LEK 557
Query: 644 KER--SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKE 701
K R S E + VA +EA A+ + V+I PR LGY + ++ +
Sbjct: 558 KSRILSPEEKKTVAYHEAGHAICGWFLQYADPLVKVSIIPRGQGALGYAQ----YLPKDQ 613
Query: 702 GMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFVLG-GLSDKH- 759
+ S++ + + L R ++EL +++ ++ A+ +L G+SDK
Sbjct: 614 YLTSQEQFKHRMIMTLGGRVSEELHFDT--VTSGASDDFKKITQMAQQMILKLGMSDKLG 671
Query: 760 ---FGLSN-----FWVADRINE-----IDTEALRILNLCYERAKEILQRNRNLLDAVVNE 806
+ S+ F V +E ID E R+++ YE ++L +L+D V E
Sbjct: 672 QICYDTSSDNGNGFKVHHNYSETTARIIDEEVKRLIDESYEACHKLLTEKLDLVDKVAEE 731
Query: 807 LVEKKSLTKQEFFHLVELHGSLEPMP 832
L +K+ LT+++ ++++ G P P
Sbjct: 732 LFKKEVLTRED---MIKICGP-RPFP 753
Score = 45 (20.9 bits), Expect = 6.5e-49, Sum P(3) = 6.5e-49
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 31 FQFCTP--FSCKNQNFNPQNEDRNKNQNS 57
F TP F Q FN N D K+ N+
Sbjct: 29 FSTYTPLAFRTSRQLFNKSNNDNKKSNNN 57
>UNIPROTKB|Q5AJC2 [details] [associations]
symbol:AFG3 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 438 (159.2 bits), Expect = 6.5e-49, Sum P(3) = 6.5e-49
Identities = 88/171 (51%), Positives = 117/171 (68%)
Query: 421 YRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSL 480
Y + G + KTLLAKA AGEAGV F S+S S+FVE++VGVGASRVR L
Sbjct: 312 YEKLGAKIPRGAILSGPPGTGKTLLAKATAGEAGVPFLSVSGSEFVEMFVGVGASRVRDL 371
Query: 481 YQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIAS 540
++ A++ AP+++F+DE+DA+G+ERG + G ER+ TLNQLLV +DGF+ +V+ +A
Sbjct: 372 FKTAREMAPAIIFVDEIDAIGKERGNGRMGGNDERENTLNQLLVEMDGFDTTDHVVVLAG 431
Query: 541 TNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPM--ADDVD 589
TNRPDILD AL+RPGRFDR I I P + GR +I KVH K + D+D
Sbjct: 432 TNRPDILDKALLRPGRFDRHISIDVPDVEGRKQIFKVHLNKLKLKSVQDID 482
Score = 138 (53.6 bits), Expect = 6.5e-49, Sum P(3) = 6.5e-49
Identities = 65/266 (24%), Positives = 123/266 (46%)
Query: 586 DDVDYLA--VASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDR 643
++++ LA +A++T G GA++AN A+ R+ + T QA + G L++
Sbjct: 499 EEIEKLAGRLAALTPGFAGADIANCCNEGALIAAREDAPAVDTYHFEQAIERVIAG-LEK 557
Query: 644 KER--SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKE 701
K R S E + VA +EA A+ + V+I PR LGY + ++ +
Sbjct: 558 KSRILSPEEKKTVAYHEAGHAICGWFLQYADPLVKVSIIPRGQGALGYAQ----YLPKDQ 613
Query: 702 GMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFVLG-GLSDKH- 759
+ S++ + + L R ++EL +++ ++ A+ +L G+SDK
Sbjct: 614 YLTSQEQFKHRMIMTLGGRVSEELHFDT--VTSGASDDFKKITQMAQQMILKLGMSDKLG 671
Query: 760 ---FGLSN-----FWVADRINE-----IDTEALRILNLCYERAKEILQRNRNLLDAVVNE 806
+ S+ F V +E ID E R+++ YE ++L +L+D V E
Sbjct: 672 QICYDTSSDNGNGFKVHHNYSETTARIIDEEVKRLIDESYEACHKLLTEKLDLVDKVAEE 731
Query: 807 LVEKKSLTKQEFFHLVELHGSLEPMP 832
L +K+ LT+++ ++++ G P P
Sbjct: 732 LFKKEVLTRED---MIKICGP-RPFP 753
Score = 45 (20.9 bits), Expect = 6.5e-49, Sum P(3) = 6.5e-49
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 31 FQFCTP--FSCKNQNFNPQNEDRNKNQNS 57
F TP F Q FN N D K+ N+
Sbjct: 29 FSTYTPLAFRTSRQLFNKSNNDNKKSNNN 57
>RGD|620764 [details] [associations]
symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" species:10116 "Rattus
norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO;ISS] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO;ISS]
[GO:0007005 "mitochondrion organization" evidence=ISO;ISS]
[GO:0008283 "cell proliferation" evidence=ISO;ISS] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 RGD:620764 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008283 GO:GO:0004222 GO:GO:0006515
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
HOGENOM:HOG000217276 MEROPS:M41.A20 HOVERGEN:HBG057127
OrthoDB:EOG4KH2TK EMBL:AF151784 IPI:IPI00206065 UniGene:Rn.8153
ProteinModelPortal:Q925S8 SMR:Q925S8 MINT:MINT-4611841
STRING:Q925S8 PRIDE:Q925S8 UCSC:RGD:620764 InParanoid:Q925S8
Genevestigator:Q925S8 GermOnline:ENSRNOG00000017100 Uniprot:Q925S8
Length = 715
Score = 519 (187.8 bits), Expect = 6.9e-49, P = 6.9e-49
Identities = 144/387 (37%), Positives = 218/387 (56%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+AVAGEA V F+ S S+F E++VGVGASR+R+L++EAK NAP V+FIDELD+VG
Sbjct: 327 KTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVG 386
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R I+ T+ QLL +DGF+ VI I +TN P+ LD AL+RPGRFD ++
Sbjct: 387 GKR--IEFPMHPYSRQTIIQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQV 444
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
+P+P + GR EILK + K VD +A T G GAEL N+V AA+ DG+
Sbjct: 445 TVPRPDVKGRTEILKWYLNKIKFDKSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGK 504
Query: 622 TEITTDDLLQAAQIEERGMLDRKERSSETWRQ----VAINEAAMAVVAVNFPDLKNIEFV 677
+T +L + +++ ++ + RS E + A +E+ A++A D I
Sbjct: 505 EMVTMKELEFS---KDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKA 561
Query: 678 TIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWA 737
TI PR G LG+V + ++ ++ E R LL + V + R A+EL G ++T +
Sbjct: 562 TIMPR-GPTLGHVSLLPENDRWNE---IRAQLLAQMDVSMGGRVAEELIFGTDHITTGAS 617
Query: 738 ETADNARSAARTFVLG-GLSDKHFGLSNFWVADRINE-----IDTEALRILNLCYERAKE 791
DNA A+ V G+S+K G+ + +++ I+ E +L YERAK
Sbjct: 618 SDFDNATKIAKRMVTKFGMSEK-LGVMTYSDTGKLSPETQSAIEQEIRILLRESYERAKH 676
Query: 792 ILQ----RNRNLLDAVVN-ELVEKKSL 813
IL+ ++NL +A++ E ++ K +
Sbjct: 677 ILKTHAKEHKNLAEALLTYETLDAKEI 703
>ZFIN|ZDB-GENE-091113-41 [details] [associations]
symbol:yme1l1a "YME1-like 1a" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-091113-41 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 GO:GO:0006508
GO:GO:0004222 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 EMBL:CU138525 IPI:IPI00962165
Ensembl:ENSDART00000110185 Uniprot:E7EZJ5
Length = 729
Score = 519 (187.8 bits), Expect = 1.6e-48, P = 1.6e-48
Identities = 145/399 (36%), Positives = 224/399 (56%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+AVAGEA V F+ S S+F E++VGVGASR+R+L++EAK +AP V+FIDELD+VG
Sbjct: 341 KTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFKEAKASAPCVIFIDELDSVG 400
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R I+ T+NQLL +DGF+ VI I +TN + LD ALVRPGRFD ++
Sbjct: 401 GKR--IESPMHPYSRQTINQLLAEMDGFKPNEGVIVIGATNFAEALDNALVRPGRFDMQV 458
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
+P P + GR EIL+ + +K + +D +A T G GAEL N+V AA+ DG+
Sbjct: 459 TVPIPDVKGRTEILEWYLKKIKVDSAIDAEIIARGTVGFSGAELENLVNQAALKAAADGK 518
Query: 622 TEITTDDLLQAAQIEERGMLDRKERSSETWRQ----VAINEAAMAVVAVNFPDLKNIEFV 677
+T +L A +++ ++ + RS E ++ A +E+ A+VA D I
Sbjct: 519 DLVTMKELKFA---KDKILMGPERRSVEIDKRNKTITAYHESGHAIVAYYTKDAMPINKA 575
Query: 678 TIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWA 737
TI PR G LG+V + ++ ++ E +R LL + V + R A+EL G Q+++ +
Sbjct: 576 TIMPR-GPSLGHVSLLPENDRWSE---TRAQLLAQMDVSMGGRVAEELVFGNDQITSGAS 631
Query: 738 ETADNARSAARTFVLG-GLSDKHFGLSNFWVADRINE-----IDTEALRILNLCYERAKE 791
D A A+ V G+SDK G+ + + + ++ E +L YERAK+
Sbjct: 632 SDFDGATKIAQMMVTRFGMSDK-LGVMTYSDLTKHSPETRAAVEQEIRVLLQSSYERAKK 690
Query: 792 ILQRNRNLLDAVVNELVEKKSLTKQEFFHLVELHGSLEP 830
IL+ + + L+ ++L +E ++E SL+P
Sbjct: 691 ILKTYSKEHKLLADALLTYETLNAKEIQMILE-GKSLDP 728
>UNIPROTKB|J9NRR9 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0016020
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01241 GeneTree:ENSGT00550000074836 EMBL:AAEX03001169
Ensembl:ENSCAFT00000045217 Uniprot:J9NRR9
Length = 694
Score = 505 (182.8 bits), Expect = 2.9e-47, P = 2.9e-47
Identities = 129/322 (40%), Positives = 188/322 (58%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+AVAGEA V F+ S S+F E++VGVGASR+R+L++EAK NAP V+FIDELD+VG
Sbjct: 327 KTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVG 386
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R I+ T+NQLL +DGF+ VI I +TN P+ LD AL+RPGRFD ++
Sbjct: 387 GKR--IESPMHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQV 444
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
+P+P + GR EILK + K VD +A T G GAEL N+V AA+ DG+
Sbjct: 445 TVPRPDVKGRTEILKWYLNKIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGK 504
Query: 622 TEITTDDLLQAAQIEERGMLDRKERSSETWRQ----VAINEAAMAVVAVNFPDLKNIEFV 677
+T +L + +++ ++ + RS E + A +E+ A++A D I
Sbjct: 505 EMVTMKELEFS---KDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKA 561
Query: 678 TIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWA 737
TI PR G LG+V + ++ ++ E +R LL + V + R A+EL G ++T +
Sbjct: 562 TIMPR-GPTLGHVSLLPENDRWNE---TRAQLLAQMDVSMGGRVAEELIFGTDHITTGAS 617
Query: 738 ETADNARSAARTFVLG-GLSDK 758
DNA A+ V G+S+K
Sbjct: 618 SDFDNATKIAKRMVTKFGMSEK 639
>SGD|S000006228 [details] [associations]
symbol:YME1 "Catalytic subunit of the mitochondrial inner
membrane i-AAA protease" species:4932 "Saccharomyces cerevisiae"
[GO:0006457 "protein folding" evidence=IMP] [GO:0005743
"mitochondrial inner membrane" evidence=IEA;IDA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=IGI;IMP]
[GO:0006515 "misfolded or incompletely synthesized protein
catabolic process" evidence=IMP] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0031942 "i-AAA complex"
evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
SGD:S000006228 GO:GO:0005524 GO:GO:0006457 GO:GO:0046872
GO:GO:0004222 EMBL:Z71255 EMBL:BK006949 GO:GO:0006515
eggNOG:COG0465 TIGRFAMs:TIGR01241 EMBL:Z49274 GO:GO:0004176
HOGENOM:HOG000217276 MEROPS:M41.004 GO:GO:0031942
GeneTree:ENSGT00550000074836 KO:K08955 OrthoDB:EOG4FR40W
EMBL:L14616 EMBL:X81067 EMBL:D16332 PIR:S54498 RefSeq:NP_015349.1
ProteinModelPortal:P32795 SMR:P32795 IntAct:P32795 STRING:P32795
PaxDb:P32795 PeptideAtlas:P32795 EnsemblFungi:YPR024W GeneID:856135
KEGG:sce:YPR024W CYGD:YPR024w OMA:SEFDEVY NextBio:981236
Genevestigator:P32795 GermOnline:YPR024W Uniprot:P32795
Length = 747
Score = 508 (183.9 bits), Expect = 8.1e-47, P = 8.1e-47
Identities = 136/384 (35%), Positives = 207/384 (53%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+A AGEAGV+FF +S S+F E+YVGVGA R+R L+ +A+ AP+++FIDELDA+G
Sbjct: 327 KTLLARATAGEAGVDFFFMSGSEFDEVYVGVGAKRIRDLFAQARSRAPAIIFIDELDAIG 386
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R + ++ TLNQLLV LDGF +I I +TN P+ LD AL RPGRFD+ +
Sbjct: 387 GKRNPKDQAYAKQ---TLNQLLVELDGFSQTSGIIIIGATNFPEALDKALTRPGRFDKVV 443
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
+ P + GR +ILK H +K +AD+VD +A T G+ GAELAN+V AA+ +
Sbjct: 444 NVDLPDVRGRADILKHHMKKITLADNVDPTIIARGTPGLSGAELANLVNQAAVYACQKNA 503
Query: 622 TEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTI 679
+ A G +RK + + A +EA A++A + TI
Sbjct: 504 VSVDMSHFEWAKDKILMGA-ERKTMVLTDAARKATAFHEAGHAIMAKYTNGATPLYKATI 562
Query: 680 APRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAET 739
PR GR LG + ++ M + ++++ + V + + A+EL G+ ++
Sbjct: 563 LPR-GRALG-ITFQLPEMDKVD--ITKRECQARLDVCMGGKIAEELIYGKDNTTSGCGSD 618
Query: 740 ADNARSAARTFVLG-GLSDK--HFGLSNFWVA--DRINEI-DTEALRILNLCYERAKEIL 793
+A AR V G+SD LS W + ++I +I D E + +L ERA+ +L
Sbjct: 619 LQSATGTARAMVTQYGMSDDVGPVNLSENWESWSNKIRDIADNEVIELLKDSEERARRLL 678
Query: 794 QRNRNLLDAVVNELVEKKSLTKQE 817
+ L + L+E ++L E
Sbjct: 679 TKKNVELHRLAQGLIEYETLDAHE 702
>UNIPROTKB|F1NXP0 [details] [associations]
symbol:SPG7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=IEA] [GO:0008089 "anterograde axon cargo
transport" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0008089
GO:GO:0030163 GeneTree:ENSGT00530000063070 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 OMA:MMDHEAK EMBL:AADN02054132
IPI:IPI00601320 Ensembl:ENSGALT00000010016 Uniprot:F1NXP0
Length = 768
Score = 496 (179.7 bits), Expect = 3.4e-45, P = 3.4e-45
Identities = 138/426 (32%), Positives = 224/426 (52%)
Query: 413 VD-VKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVG 471
VD +K D Y + G + KTLLAKAVA EA V F +++ S+FVE+ G
Sbjct: 298 VDYLKNPDRYLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGSEFVEVIGG 357
Query: 472 VGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGL-IKGSGGQERDATLNQLLVCLDGFE 530
+GA+RVRSL++EA+ AP +V+IDE+DAVG++R + G E + TLNQLLV +DG
Sbjct: 358 LGAARVRSLFREAQARAPCIVYIDEIDAVGKKRSTNVSGFANAEEEQTLNQLLVEMDGMG 417
Query: 531 GRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDY 590
+VI +ASTNR D+LD AL+RPGR DR IFI P L R EI + H + + D +
Sbjct: 418 TTDHVIVLASTNRADVLDNALMRPGRLDRHIFIDLPTLQERREIFEQHLKGLKLIQDASF 477
Query: 591 LA--VASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDR-KERS 647
+ +A +T G GA++ANI AA++ R+G I T + A + G R K S
Sbjct: 478 YSQHLAELTPGFSGADIANICNEAALHAAREGHKSIDTFNFEYAVERVIAGTAKRNKILS 537
Query: 648 SETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQ 707
E + VA +E+ A+V + + V+IAPR LG+ ++ + ++ + +++
Sbjct: 538 PEERKVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFAQI----LPREQYLFTKE 593
Query: 708 SLLDHITVQLAPRAAD-----ELWCG-EGQLSTIWAETADNARSAARTFVLGGLS----D 757
LL+ + + L R ++ ++ G + L + + +G +S +
Sbjct: 594 QLLERMCMALGGRVSEAITFNKVTTGAQDDLKRVTKIAYSMVKQYGMVPSIGQISFPDGE 653
Query: 758 KHFGLSNFWVADRINEI-DTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQ 816
G+ + + ++ D EA ++ Y R +++L NR+ L + N L+EK+ +
Sbjct: 654 STVGIGRRPFSQGLQQMMDHEAKVLVAQAYRRTEKLLLDNRDKLQTLSNALLEKEVINYD 713
Query: 817 EFFHLV 822
+ L+
Sbjct: 714 DIEALI 719
>TAIR|locus:2174819 [details] [associations]
symbol:EMB3144 "EMBRYO DEFECTIVE 3144" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006508
"proteolysis" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0006399 "tRNA metabolic process" evidence=RCA]
[GO:0009658 "chloroplast organization" evidence=RCA] [GO:0016556
"mRNA modification" evidence=RCA] [GO:0009536 "plastid"
evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 EMBL:CP002688
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 GO:GO:0009790
GO:GO:0017111 IPI:IPI00527762 RefSeq:NP_201263.2 UniGene:At.28951
ProteinModelPortal:F4KF14 SMR:F4KF14 PRIDE:F4KF14
EnsemblPlants:AT5G64580.1 GeneID:836579 KEGG:ath:AT5G64580
OMA:LCWISAK Uniprot:F4KF14
Length = 855
Score = 496 (179.7 bits), Expect = 6.5e-45, P = 6.5e-45
Identities = 147/416 (35%), Positives = 225/416 (54%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKA+AGEAG+ FF+ + + FVE++VGV ASRV+ L+ ++ APS++FIDE+DA+G
Sbjct: 362 KTLLAKAIAGEAGLPFFAANGTDFVEMFVGVAASRVKDLFASSRSYAPSIIFIDEIDAIG 421
Query: 502 RERGLIK-GSGGQERDATLNQLLVCLDGFE-GRGNVITIASTNRPDILDPALVRPGRFDR 559
+RG G GG ER+ L Q+L +DGF+ V+ I +TNR DILDPAL+R GRFD+
Sbjct: 422 SKRGGPDIGGGGAEREQGLLQILTEMDGFKVTTSQVLVIGATNRLDILDPALLRKGRFDK 481
Query: 560 KIFIPKPGLIGRMEILKVHARKK--PMADDVDYLA--VASMTDGMVGAELANIVEVAAIN 615
I + P GR+ ILKVHAR K D+ + L VA T+ GAEL N++ A I
Sbjct: 482 IIRVGLPSKDGRLAILKVHARNKFFRSEDEKEELLQEVAENTEDFTGAELQNVLNEAGIL 541
Query: 616 MMRDGRTEITTDDLLQAAQIE----ERGMLDRKERSSETWRQVAINEAAMAVVAVNFPDL 671
R I ++LL+A + + E G D E E ++A EAA+AV+A PD
Sbjct: 542 TARKDLDYIGREELLEALKRQKGTFETGQEDSTEVPEELKLRLAYREAAVAVLACYLPD- 600
Query: 672 KNIEFVTIAPRAGRELGYVRMKMDHMKFKE--G-MLSRQS-LLDHITVQLAPRAADELWC 727
++ P + ++ +R + +M++ E G + +R+S ++ I APR +E
Sbjct: 601 ---QY---RPISETDINSIRSQ-PNMRYSETSGRVFARKSDYVNSIIRACAPRVVEEEMF 653
Query: 728 GEGQLSTIWAETADNARSAARTFVLG-GLSDKHFGLSNFW-VADRINEI--DTEALR--I 781
G L I A++ A A +L G++ FG + + D + + EALR
Sbjct: 654 GIENLCWISAKSTLEASQRAEFLILQTGMTA--FGKAYYRNQRDLVPNLVPKLEALRDEY 711
Query: 782 LNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLVELHGSLEPMPPSIVD 837
+ E+ ILQ ++ L+ + + L+EK + E +++ + P VD
Sbjct: 712 MRFAVEKCSSILQEYQSALEEITDVLLEKGEIKADEIWNIYNTAPRIPQKPVRPVD 767
>UNIPROTKB|Q9UQ90 [details] [associations]
symbol:SPG7 "Paraplegin" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0008089 "anterograde axon cargo transport"
evidence=IEA] [GO:0031966 "mitochondrial membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004222
"metalloendopeptidase activity" evidence=IDA] [GO:0005739
"mitochondrion" evidence=TAS] [GO:0051082 "unfolded protein
binding" evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0008233 "peptidase activity" evidence=TAS]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0007399 GO:GO:0031966 GO:GO:0046872
GO:GO:0008219 GO:GO:0051082 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0008089 GO:GO:0030163 eggNOG:COG0465
HOGENOM:HOG000217277 HOVERGEN:HBG050184 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 EMBL:Y16610 EMBL:AF080525
EMBL:AF080511 EMBL:AF080512 EMBL:AF080513 EMBL:AF080514
EMBL:AF080515 EMBL:AF080516 EMBL:AF080517 EMBL:AF080518
EMBL:AF080519 EMBL:AF080520 EMBL:AF080521 EMBL:AF080522
EMBL:AF080523 EMBL:AF080524 EMBL:BC007692 EMBL:BC035929
EMBL:BC036104 EMBL:BC110530 EMBL:BC110531 IPI:IPI00299010
IPI:IPI00398508 RefSeq:NP_003110.1 RefSeq:NP_955399.1
UniGene:Hs.185597 PDB:2QZ4 PDBsum:2QZ4 ProteinModelPortal:Q9UQ90
SMR:Q9UQ90 IntAct:Q9UQ90 STRING:Q9UQ90 MEROPS:M41.006
PhosphoSite:Q9UQ90 DMDM:116242796 PaxDb:Q9UQ90 PRIDE:Q9UQ90
DNASU:6687 Ensembl:ENST00000268704 Ensembl:ENST00000341316
GeneID:6687 KEGG:hsa:6687 UCSC:uc002fni.3 UCSC:uc002fnj.3 CTD:6687
GeneCards:GC16P089574 HGNC:HGNC:11237 MIM:602783 MIM:607259
neXtProt:NX_Q9UQ90 Orphanet:99013 PharmGKB:PA36067
InParanoid:Q9UQ90 KO:K09552 OMA:MMDHEAK OrthoDB:EOG4PG60F
PhylomeDB:Q9UQ90 ChiTaRS:SPG7 EvolutionaryTrace:Q9UQ90
GenomeRNAi:6687 NextBio:26057 ArrayExpress:Q9UQ90 Bgee:Q9UQ90
CleanEx:HS_SPG7 Genevestigator:Q9UQ90 GermOnline:ENSG00000197912
Uniprot:Q9UQ90
Length = 795
Score = 493 (178.6 bits), Expect = 1.0e-44, P = 1.0e-44
Identities = 137/411 (33%), Positives = 219/411 (53%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKAVA EA V F +++ +FVE+ G+GA+RVRSL++EA+ AP +V+IDE+DAVG
Sbjct: 355 KTLLAKAVATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVG 414
Query: 502 RERGL-IKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRK 560
++R + G E + TLNQLLV +DG +VI +ASTNR DILD AL+RPGR DR
Sbjct: 415 KKRSTTMSGFSNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADILDGALMRPGRLDRH 474
Query: 561 IFIPKPGLIGRMEILKVHARKKPMADDVDYLA--VASMTDGMVGAELANIVEVAAINMMR 618
+FI P L R EI + H + + + + +A +T G GA++ANI AA++ R
Sbjct: 475 VFIDLPTLQERREIFEQHLKSLKLTQSSTFYSQRLAELTPGFSGADIANICNEAALHAAR 534
Query: 619 DGRTEITTDDLLQAAQIEERGMLDR-KERSSETWRQVAINEAAMAVVAVNFPDLKNIEFV 677
+G T + T + A + G + K S E + VA +E+ A+V + + V
Sbjct: 535 EGHTSVHTLNFEYAVERVLAGTAKKSKILSKEEQKVVAFHESGHALVGWMLEHTEAVMKV 594
Query: 678 TIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGE---GQLST 734
+I PR LG+ +M + + + +++ L + + + L RA++ L E G
Sbjct: 595 SITPRTNAALGFAQM----LPRDQHLFTKEQLFERMCMALGGRASEALSFNEVTSGAQDD 650
Query: 735 IWAETADNARSAARTFVLG-GLSDKHF--------GLSNFWVADRINEI-DTEALRILNL 784
+ T A S + F + G+ F G+ + + ++ D EA ++
Sbjct: 651 LRKVTRI-AYSMVKQFGMAPGIGPISFPEAQEGLMGIGRRPFSQGLQQMMDHEARLLVAK 709
Query: 785 CYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLV--ELHGSLEPMPP 833
Y +++LQ N + L A+ N L+EK+ + ++ L+ HG + + P
Sbjct: 710 AYRHTEKVLQDNLDKLQALANALLEKEVINYEDIEALIGPPPHGPKKMIAP 760
>ZFIN|ZDB-GENE-030131-5391 [details] [associations]
symbol:spg7 "spastic paraplegia 7" species:7955
"Danio rerio" [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 SMART:SM00382
ZFIN:ZDB-GENE-030131-5391 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:6687 KO:K09552 OMA:MMDHEAK EMBL:AL954648 EMBL:BX470191
IPI:IPI00483001 RefSeq:XP_001923118.1 UniGene:Dr.105782
Ensembl:ENSDART00000098438 GeneID:794740 KEGG:dre:794740
NextBio:20931970 Uniprot:E7F2S4
Length = 788
Score = 490 (177.5 bits), Expect = 2.2e-44, P = 2.2e-44
Identities = 138/415 (33%), Positives = 219/415 (52%)
Query: 413 VD-VKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVG 471
VD +K D Y + G + KTLLAKAVA EA V F +++ S+FVE+ G
Sbjct: 316 VDYLKNPDRYLQLGAKVPKGSLLLGPPGCGKTLLAKAVATEAQVPFLAMAGSEFVEVIGG 375
Query: 472 VGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGL-IKGSGGQERDATLNQLLVCLDGFE 530
+GA+RVRSL++EA+ AP +V+IDE+DAVG++R + G E + TLNQLLV +DG
Sbjct: 376 LGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTNMSGFSNTEEEQTLNQLLVEMDGMG 435
Query: 531 GRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDY 590
+VI +ASTNR DILD AL+RPGR DR IFI P L R EI + H + + D+
Sbjct: 436 TTDHVIVLASTNRADILDNALMRPGRLDRHIFIDLPTLQERKEIFEQHLKILKLTQPADF 495
Query: 591 --LAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDR-KERS 647
L +A +T G GA++ANI AA++ R+G I T A + G + + K S
Sbjct: 496 YSLRLAELTPGFSGADIANICNEAALHAAREGFKSIDTFSFEYAVERVIAGSVKKSKILS 555
Query: 648 SETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQ 707
E R VA +E+ A+V + + V+IAPR LG+ ++ + +F + +++
Sbjct: 556 KEEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFAQI-LPRDQF---LFTKE 611
Query: 708 SLLDHITVQLAPRAAD-----ELWCG-EGQLSTIWAETADNARSAARTFVLGGLS----D 757
L + + + L RA++ ++ G + L + + +G +S +
Sbjct: 612 QLFERMCMALGGRASEAITFNKVTTGAQDDLRKVTRVAYSMVKQYGMVDSVGQVSFPDSE 671
Query: 758 KHFGLSNFWVADRINE-IDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKK 811
G+ + + + +D EA ++ Y +++L NR+ L + N L+E++
Sbjct: 672 NQSGIGRRPFSQGLQQQMDLEAKMLIAKAYRHTEKLLLDNRDKLILLANALLERE 726
>TAIR|locus:2138146 [details] [associations]
symbol:FtsHi1 "FTSH inactive protease 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008237 "metallopeptidase
activity" evidence=ISS] [GO:0009658 "chloroplast organization"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0007020 "microtubule nucleation"
evidence=RCA] [GO:0010020 "chloroplast fission" evidence=IMP]
[GO:0009536 "plastid" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 Pfam:PF01434
SMART:SM00382 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0051301 GO:GO:0006508 GO:GO:0009941 GO:GO:0004222
eggNOG:COG0465 GO:GO:0017111 GO:GO:0010020 EMBL:AC002343
EMBL:AL078468 EMBL:AL161560 HSSP:Q9LCZ4 IPI:IPI00537043 PIR:T08913
RefSeq:NP_567691.1 UniGene:At.3392 ProteinModelPortal:O22993
SMR:O22993 PaxDb:O22993 PRIDE:O22993 EnsemblPlants:AT4G23940.1
GeneID:828494 KEGG:ath:AT4G23940 TAIR:At4g23940
HOGENOM:HOG000029491 InParanoid:O22993 OMA:QMAGSEF PhylomeDB:O22993
ProtClustDB:CLSN2689578 ArrayExpress:O22993 Genevestigator:O22993
Uniprot:O22993
Length = 946
Score = 496 (179.7 bits), Expect = 3.4e-44, Sum P(2) = 3.4e-44
Identities = 129/330 (39%), Positives = 191/330 (57%)
Query: 415 VKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGA 474
+K D++ + G++ KTL+AKA+AGEAGV F+ ++ S+FVE+ VGVG+
Sbjct: 449 LKNPDLFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGS 508
Query: 475 SRVRSLYQEAKDNAPSVVFIDELDAVG-RERGLIK-------GSGGQERDATLNQLLVCL 526
+R+R L++ AK N PSV+FIDE+DA+ R +G+ K + QER+ TLNQLL+ L
Sbjct: 509 ARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKENSDQLYNAATQERETTLNQLLIEL 568
Query: 527 DGFE-GRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMA 585
DGF+ G+G VI + +TNR D+LDPAL+RPGRFDRKI + P GR++ILK+HA K M+
Sbjct: 569 DGFDTGKG-VIFLGATNRRDLLDPALLRPGRFDRKIRVRPPNAKGRLDILKIHASKVKMS 627
Query: 586 DDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLD-RK 644
D VD + AS G GA+LA +V+ AA+ +R I D+ A G
Sbjct: 628 DSVDLSSYASNLPGWSGAKLAQLVQEAALVAVRKTHNSILQSDMDDAVDRLTVGPTRIGL 687
Query: 645 ERSSETWRQVAINEAAMAVVA---VNFPDLK--NIEFVTIAPRAGRELGYVRM-KMDHMK 698
E + + A E +A+ + + + + K + V+I PR G+ L V ++D
Sbjct: 688 ELGHQGQCRRATTEVGVAITSHLLLRYENAKIERCDRVSIIPR-GQTLSQVVFHRLDDES 746
Query: 699 FKEGMLSRQSLLDHITVQLAPRAADELWCG 728
+ G L + LL + V L RAA+E+ G
Sbjct: 747 YMFGRLPQ--LLHRLQVLLGGRAAEEVIYG 774
Score = 37 (18.1 bits), Expect = 3.4e-44, Sum P(2) = 3.4e-44
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 146 SGSLRQKAEPVLVVLEDSRVLRTVLPSLDSNRKFWESW 183
+ SL +LVV+ ++R L N + W+ W
Sbjct: 370 ASSLEMLKPILLVVMTMVLLVRFTLSRRPKNFRKWDLW 407
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 468 (169.8 bits), Expect = 5.5e-44, P = 5.5e-44
Identities = 100/232 (43%), Positives = 144/232 (62%)
Query: 415 VKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGA 474
+K +++ + G+ KTLLAKAVA E F + S+ V+ ++G GA
Sbjct: 190 LKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAVATETNATFIRVVGSELVKKFIGEGA 249
Query: 475 SRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGN 534
S V+ +++ AK+ APS++FIDE+DA+ +R G +E TL QLL +DGF+ RG+
Sbjct: 250 SLVKDIFKLAKEKAPSIIFIDEIDAIAAKRTDALTGGDREVQRTLMQLLAEMDGFDARGD 309
Query: 535 VITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVA 594
V I +TNRPDILDPA++RPGRFDR I +P P GR+EILK+H RK +A+DV+ +A
Sbjct: 310 VKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVNLEEIA 369
Query: 595 SMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQ-IEERGMLDRKE 645
MT+G VGAEL I A +N +R+ R +T DD +A + I E+ + KE
Sbjct: 370 KMTEGCVGAELKAICTEAGMNAIRELRDYVTMDDFRKAVEKIMEKKKVKVKE 421
>UNIPROTKB|A7E2Z6 [details] [associations]
symbol:SPG7 "SPG7 protein" species:9913 "Bos taurus"
[GO:0008089 "anterograde axon cargo transport" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0008089 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
MEROPS:M41.006 CTD:6687 KO:K09552 OMA:MMDHEAK OrthoDB:EOG4PG60F
EMBL:DAAA02046269 EMBL:BC151632 IPI:IPI00866907
RefSeq:NP_001095492.1 UniGene:Bt.11239 SMR:A7E2Z6 STRING:A7E2Z6
Ensembl:ENSBTAT00000032500 GeneID:515269 KEGG:bta:515269
InParanoid:A7E2Z6 NextBio:20871741 Uniprot:A7E2Z6
Length = 779
Score = 486 (176.1 bits), Expect = 6.1e-44, P = 6.1e-44
Identities = 135/411 (32%), Positives = 221/411 (53%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKAVA EA V F +++ +FVE+ G+GA+RVRSL++EA+ AP +V+IDE+DAVG
Sbjct: 355 KTLLAKAVATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVG 414
Query: 502 RERGL-IKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRK 560
++R + G E + TLNQLLV +DG +VI +A+TNR DILD AL+RPGR DR
Sbjct: 415 KKRSTAVSGFSNTEEEQTLNQLLVEMDGMGTTDHVIVLAATNRADILDNALLRPGRLDRH 474
Query: 561 IFIPKPGLIGRMEILKVHARKKPMADDVDYLA--VASMTDGMVGAELANIVEVAAINMMR 618
+FI P L R EI + H + + + + +A +T G GA++ANI AA++ R
Sbjct: 475 VFIDLPTLQERKEIFEQHLKSLKLTRASSFYSQRLAELTPGFSGADIANICNEAALHAAR 534
Query: 619 DGRTEITTDDLLQAAQIEERGMLDR-KERSSETWRQVAINEAAMAVVAVNFPDLKNIEFV 677
+G T + T +L A + G + K S E + VA +E+ A+V + + V
Sbjct: 535 EGHTAVHTSNLDYAVERVVAGTAKKSKVLSKEEQKVVAFHESGHALVGWLLEHTEAVMKV 594
Query: 678 TIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGE---GQLST 734
+I PR LG+ +M + + + +R+ L + + + L RA++ + G
Sbjct: 595 SITPRTNAALGFAQM----LPRDQHLFTREQLFERMCMALGGRASESISFNRVTSGAQDD 650
Query: 735 IWAETADNARSAARTF----VLGGLS--DKHFGLSNFW---VADRINE-IDTEALRILNL 784
+ T A S + F +G +S + G++ + + + ID EA ++
Sbjct: 651 LRKVTRI-AYSMVKQFGMAPSIGPVSFPEAQEGVTGIGRRPFSQGLQQMIDHEARLLVAT 709
Query: 785 CYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLV--ELHGSLEPMPP 833
Y +++L+ N + L A+ + L+EK+ + ++ L+ HG + + P
Sbjct: 710 AYRHTEQVLRDNLDKLHALASALLEKEVINYEDIEALIGPPPHGPKKKIAP 760
>UNIPROTKB|E2R4F3 [details] [associations]
symbol:SPG7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008089 "anterograde axon cargo transport"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0008089
GO:GO:0030163 GeneTree:ENSGT00530000063070 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 CTD:6687 KO:K09552 OMA:MMDHEAK
EMBL:AAEX03003953 EMBL:AAEX03003954 RefSeq:XP_546777.3
Ensembl:ENSCAFT00000031561 GeneID:489657 KEGG:cfa:489657
NextBio:20862809 Uniprot:E2R4F3
Length = 793
Score = 485 (175.8 bits), Expect = 8.9e-44, P = 8.9e-44
Identities = 136/411 (33%), Positives = 221/411 (53%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKAVA EA V F +++ +FVE+ G+GA+RVRSL++EA+ AP +V+IDE+DAVG
Sbjct: 355 KTLLAKAVATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVG 414
Query: 502 RERGL-IKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRK 560
++R + G E + TLNQLLV +DG +VI +ASTNR DILD AL+RPGR DR
Sbjct: 415 KKRSTTMSGFSNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADILDNALLRPGRLDRH 474
Query: 561 IFIPKPGLIGRMEILKVHARKKPMADDVDYLA--VASMTDGMVGAELANIVEVAAINMMR 618
+FI P L R EI + H + + + + +A +T G GA++ANI AA++ R
Sbjct: 475 VFIDLPTLQERREIFEHHLKSLKLTQASSFYSQRLAELTPGFSGADIANICNEAALHAAR 534
Query: 619 DGRTEITTDDLLQAAQIEERGMLDR-KERSSETWRQVAINEAAMAVVAVNFPDLKNIEFV 677
+G T + T + A + G + K S E + VA +E+ A+V + + V
Sbjct: 535 EGHTSVHTFNFEYAVERVIAGTAKKSKILSKEEQKVVAFHESGHALVGWLLEHTEAVMKV 594
Query: 678 TIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGE---GQLST 734
+IAPR LG+ +M + + + +++ L + + + L R ++ + + G
Sbjct: 595 SIAPRTNAALGFAQM----LPRDQHLFTKEQLFERMCMALGGRVSETISFNKVTSGAQDD 650
Query: 735 IWAETADNARSAARTF----VLGGLS--DKHFGLSNFW---VADRINEI-DTEALRILNL 784
+ T A S + F +G +S + GL+ + + ++ D EA ++
Sbjct: 651 LRKVTRI-AYSMVKQFGMAPSIGPISFPEVQEGLTGIGRRPFSQGLQQMMDHEAKLLVAK 709
Query: 785 CYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLV--ELHGSLEPMPP 833
Y +++LQ N + L A+ N L+EK+ + ++ L+ HG + + P
Sbjct: 710 AYRHTEKVLQDNLDKLQALANALLEKEVINYEDIEALIGPPPHGPKKMIAP 760
>MGI|MGI:2385906 [details] [associations]
symbol:Spg7 "spastic paraplegia 7 homolog (human)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IMP] [GO:0007155 "cell adhesion" evidence=TAS] [GO:0008089
"anterograde axon cargo transport" evidence=IMP] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=TAS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 MGI:MGI:2385906 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0030155 GO:GO:0031966 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0007155 GO:GO:0004222
GO:GO:0008089 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOVERGEN:HBG050184 GO:GO:0017111
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0007005 MEROPS:M41.006
CTD:6687 KO:K09552 ChiTaRS:SPG7 EMBL:AF512565 EMBL:AF547215
EMBL:AK145540 EMBL:BC024466 EMBL:BC024986 EMBL:BC051051
EMBL:BC096690 IPI:IPI00170128 RefSeq:NP_694816.3 UniGene:Mm.292075
ProteinModelPortal:Q3ULF4 SMR:Q3ULF4 STRING:Q3ULF4
PhosphoSite:Q3ULF4 PaxDb:Q3ULF4 PRIDE:Q3ULF4
Ensembl:ENSMUST00000108868 GeneID:234847 KEGG:mmu:234847
UCSC:uc009nud.1 InParanoid:Q3ULF4 NextBio:382391 Bgee:Q3ULF4
CleanEx:MM_SPG7 Genevestigator:Q3ULF4 Uniprot:Q3ULF4
Length = 781
Score = 484 (175.4 bits), Expect = 1.1e-43, P = 1.1e-43
Identities = 136/415 (32%), Positives = 221/415 (53%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKAVA EA V F +++ +FVE+ G+GA+RVRSL++EA+ AP +V+IDE+DAVG
Sbjct: 355 KTLLAKAVATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVG 414
Query: 502 RERGL-IKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRK 560
++R + G E + TLNQLLV +DG +VI +ASTNR D+LD AL+RPGR DR
Sbjct: 415 KKRSTSMSGFSNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADVLDNALMRPGRLDRH 474
Query: 561 IFIPKPGLIGRMEILKVHARKKPMADDVDYLA--VASMTDGMVGAELANIVEVAAINMMR 618
+FI P L R EI + H + + + + +A +T G GA++ANI AA++ R
Sbjct: 475 VFIDLPTLQERREIFEQHLKGLKLTQPSSFYSQRLAELTPGFSGADIANICNEAALHAAR 534
Query: 619 DGRTEITTDDLLQAAQIEERGMLDR-KERSSETWRQVAINEAAMAVVAVNFPDLKNIEFV 677
+G T + T + A + G + K S E R VA +E+ A+V + + V
Sbjct: 535 EGHTSVHTFNFEYAVERVIAGTAKKSKILSKEEQRVVAFHESGHALVGWLLEHTEAVMKV 594
Query: 678 TIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWA 737
+IAPR LG+ +M + + + +++ L + + + L RAA+ + S + +
Sbjct: 595 SIAPRTNAALGFSQM----LPRDQYLFTKEQLFERMCMALGGRAAEAI-----SFSRVTS 645
Query: 738 ETADNARSAAR---TFV--------LGGLS-----DKHFGLSNFWVADRINEI-DTEALR 780
D+ R R + V +G +S + G+ + + ++ D EA
Sbjct: 646 GAQDDLRKVTRIAYSMVKQFGMAPSIGPVSFPEAQEGLMGIGRRPFSQGLQQMMDHEAKL 705
Query: 781 ILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLV--ELHGSLEPMPP 833
++ Y +++L N + L A+ N L+EK+ + ++ L+ HG + + P
Sbjct: 706 LVAKAYRHTEKVLLDNLDKLQALANALLEKEVINYEDIEALIGPPPHGPKKMIAP 760
>FB|FBgn0024992 [details] [associations]
symbol:CG2658 species:7227 "Drosophila melanogaster"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 HSSP:Q9LCZ4
HOGENOM:HOG000226301 MEROPS:M41.A12 EMBL:AL023874
ProteinModelPortal:O76867 SMR:O76867 PaxDb:O76867 PRIDE:O76867
FlyBase:FBgn0024992 InParanoid:O76867 OrthoDB:EOG4V6WXK
ArrayExpress:O76867 Bgee:O76867 Uniprot:O76867
Length = 819
Score = 471 (170.9 bits), Expect = 4.5e-42, P = 4.5e-42
Identities = 121/327 (37%), Positives = 184/327 (56%)
Query: 407 QYLERGVD-VKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQF 465
Q ++ VD +K + Y+R G + KTLLAKAVA EA V F S++ S+F
Sbjct: 351 QEVKEFVDYLKSPEKYQRLGAKVPRGALLLGPPGCGKTLLAKAVATEAQVPFLSMNGSEF 410
Query: 466 VEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERG----LIKGSGGQERDATLNQ 521
+E+ G+GA+RVR L++E K AP +++IDE+DA+GR+R + +GS G E + TLNQ
Sbjct: 411 IEMIGGLGAARVRDLFKEGKKRAPCIIYIDEIDAIGRQRSGTESMGQGSSG-ESEQTLNQ 469
Query: 522 LLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARK 581
LLV +DG + V+ +ASTNR DILD AL+RPGRFDR I I P L R EI + H
Sbjct: 470 LLVEMDGMATKEGVLMLASTNRADILDKALLRPGRFDRHILIDLPTLAERKEIFEKHLSS 529
Query: 582 KPMADDVDYLA--VASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERG 639
+ + +A +T G GA++AN+ AA++ R+ + E+++ +L A + G
Sbjct: 530 VKLESPPTTFSQRLARLTPGFSGADIANVCNEAALHAARNTQMEVSSKNLEYAVERLVGG 589
Query: 640 MLDRKERSSETWRQV-AINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMK 698
R S R+V A +E+ A+V P+ + VTI PR LG+ + +
Sbjct: 590 TEKRSHALSLAERKVIAYHESGHALVGWMLPNSDILLKVTIVPRTSLALGFAQ----YTP 645
Query: 699 FKEGMLSRQSLLDHITVQLAPRAADEL 725
++ + S++ L D + + L RAA+ L
Sbjct: 646 SEQHLYSKEELFDKMCMALGGRAAENL 672
Score = 286 (105.7 bits), Expect = 1.6e-21, P = 1.6e-21
Identities = 105/373 (28%), Positives = 174/373 (46%)
Query: 508 KGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPG 567
+GS G E + TLNQLLV +DG + V+ +ASTNR DILD AL+RPGRFDR I I P
Sbjct: 457 QGSSG-ESEQTLNQLLVEMDGMATKEGVLMLASTNRADILDKALLRPGRFDRHILIDLPT 515
Query: 568 LIGRMEILKVHARKKPMADDVDYLA--VASMTDGMVGAELANIVEVAAINMMRDGRTEIT 625
L R EI + H + + +A +T G GA++AN+ AA++ R+ + E++
Sbjct: 516 LAERKEIFEKHLSSVKLESPPTTFSQRLARLTPGFSGADIANVCNEAALHAARNTQMEVS 575
Query: 626 TDDLLQAAQIEERGMLDRKERSSETWRQV-AINEAAMAVVAVNFPDLKNIEFVTIAPRAG 684
+ +L A + G R S R+V A +E+ A+V P+ + VTI PR
Sbjct: 576 SKNLEYAVERLVGGTEKRSHALSLAERKVIAYHESGHALVGWMLPNSDILLKVTIVPRTS 635
Query: 685 RELGYVRM--KMDHMKFKEGMLSRQSLLDHITVQLAPRAA-DELWCG-EGQLSTIWAETA 740
LG+ + H+ KE + + + + + A + + G + L +
Sbjct: 636 LALGFAQYTPSEQHLYSKEELFDKMCMA--LGGRAAENLVFNRITTGAQNDLEKVTKIAY 693
Query: 741 DNARSAARTFVLGGL----SDKH-----FGLSNFWVADRINE--IDTEALRILNLCYERA 789
+ LG + +D+ G R E ID EA ++ Y+
Sbjct: 694 SQIKKFGMNDTLGPIYVRDADETEGGGAMGSGGKKPFSRAMESMIDNEARHVVASAYQTT 753
Query: 790 KEILQRNRNLLDAVVNELVEKKSLTKQEFFHLVELHGSLEPMPPSIVDIRAAKHSEIQEI 849
+ IL +R+ L+ + L+EK++L ++ +V+L G P PP + R + E ++
Sbjct: 754 EGILTTHRDKLEKLAEALLEKETL---DYDQVVQLIG---P-PPYDLGKRQVESVEFEQS 806
Query: 850 MTNQNVTSIGSNA 862
+ N + + + A
Sbjct: 807 LKNLSTDTDATKA 819
>TIGR_CMR|CJE_1085 [details] [associations]
symbol:CJE_1085 "cell division protein FtsH, putative"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0051301 EMBL:CP000025 GenomeReviews:CP000025_GR
eggNOG:COG0465 GO:GO:0017111 HOGENOM:HOG000217276 KO:K01417
RefSeq:YP_179078.1 ProteinModelPortal:Q5HUF7 SMR:Q5HUF7
STRING:Q5HUF7 GeneID:3231594 KEGG:cjr:CJE1085 PATRIC:20043979
OMA:HRSDERE ProtClustDB:CLSK2395802
BioCyc:CJEJ195099:GJC0-1111-MONOMER Uniprot:Q5HUF7
Length = 538
Score = 441 (160.3 bits), Expect = 5.5e-41, P = 5.5e-41
Identities = 112/276 (40%), Positives = 159/276 (57%)
Query: 421 YRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSL 480
Y+ GV+ KTL+AKAVAGEAGV FF S S FVEIYVG+GA RVR L
Sbjct: 177 YKEFGVKMPKGVLMVGPPGVGKTLIAKAVAGEAGVPFFYQSGSSFVEIYVGMGAKRVREL 236
Query: 481 YQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIAS 540
+ +AK APS+VFIDE+DAVG+ RG + ERD+TLNQLL +DGFE VI IA+
Sbjct: 237 FSKAKMMAPSIVFIDEIDAVGKARGEMSNV---ERDSTLNQLLTQMDGFEDNSGVIVIAA 293
Query: 541 TNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGM 600
TN+ +++DPAL+R GRFDR+IF+ P R++IL+++ + K +++ +A AS+ G
Sbjct: 294 TNKIELMDPALLRSGRFDRRIFLSLPDFKDRLKILEIYMKDKNNNINLNKIAKASV--GF 351
Query: 601 VGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQVAINEAA 660
GA L +V AAIN +R + D G ++E + A +AA
Sbjct: 352 SGAGLETLVNEAAINALRRNSALVEESDFYAVLNKVLLGKKKILSFNNEEKKIQATYQAA 411
Query: 661 MAVVAVNFPDLKNIEFVTIAPRAGRELGY-VRMKMD 695
A+ A + D+ E +T+ +E + +R K +
Sbjct: 412 KALSAY-YLDI-GFEKITLIEDRFKEYEHNIRSKSE 445
>FB|FBgn0034792 [details] [associations]
symbol:CG3499 species:7227 "Drosophila melanogaster"
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0005743 "mitochondrial inner membrane" evidence=ISS]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
EMBL:AE013599 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111
TIGRFAMs:TIGR01241 HSSP:Q9LCZ4 GeneTree:ENSGT00550000074836
KO:K08955 EMBL:AY051480 RefSeq:NP_726263.1 UniGene:Dm.4589
SMR:Q9W1Y0 IntAct:Q9W1Y0 MINT:MINT-924656
EnsemblMetazoa:FBtr0071906 GeneID:37636 KEGG:dme:Dmel_CG3499
UCSC:CG3499-RB FlyBase:FBgn0034792 InParanoid:Q9W1Y0
OrthoDB:EOG4Z613M GenomeRNAi:37636 NextBio:804672 Uniprot:Q9W1Y0
Length = 736
Score = 461 (167.3 bits), Expect = 6.9e-41, Sum P(2) = 6.9e-41
Identities = 135/387 (34%), Positives = 200/387 (51%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+AVAGEA V FF + +F E+ VG GA RVR L++ AK AP V+FIDE+D+VG
Sbjct: 346 KTLLARAVAGEAKVPFFHAAGPEFDEVLVGQGARRVRDLFKAAKARAPCVIFIDEIDSVG 405
Query: 502 RER--GLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDR 559
+R ++ Q T+NQLL +DGF VI + +TNR D LD AL+RPGRFD
Sbjct: 406 AKRTNSVLHPYANQ----TINQLLSEMDGFHQNAGVIVLGATNRRDDLDQALLRPGRFDV 461
Query: 560 KIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRD 619
++ + P GR EIL ++ K + D++D +A T G GA+L N++ AA+ D
Sbjct: 462 EVMVSTPDFTGRKEILSLYLTKI-LHDEIDLDMLARGTSGFTGADLENMINQAALRAAID 520
Query: 620 GRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVAVNFPDLKNIEFV 677
G ++ L A G +RK R E A +E A+VA + + V
Sbjct: 521 GAETVSMKHLETARDKVLMGP-ERKARLPDEEANTITAYHEGGHAIVAFYTKESHPLHKV 579
Query: 678 TIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWA 737
TI PR G LG+ + ++ +++ LL + + RAA+EL G ++++ +
Sbjct: 580 TIMPR-GPSLGHTAYIPEKERYH---VTKAQLLAMMDTMMGGRAAEELVFGTDKITSGAS 635
Query: 738 ETADNARSAARTFVLG-GLSDK----------HFGLSNFWVADRINEIDTEALRILNLCY 786
A S A V G+SDK G + + I +D E RIL+ Y
Sbjct: 636 SDLKQATSIATHMVRDWGMSDKVGLRTIEASKGLGTGDTLGPNTIEAVDAEIKRILSDSY 695
Query: 787 ERAKEILQRNRNLLDAVVNELVEKKSL 813
ERAK IL+++ A+ L++ ++L
Sbjct: 696 ERAKAILRKHTREHKALAEALLKYETL 722
Score = 38 (18.4 bits), Expect = 6.9e-41, Sum P(2) = 6.9e-41
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 377 EAEQNPHLKMAMQFMKSGARVRRAYGKGLPQ 407
EA+Q LK ++F+KS + GK LP+
Sbjct: 307 EAKQE--LKEVVEFLKSPEKFSNLGGK-LPK 334
>WB|WBGene00021425 [details] [associations]
symbol:ppgn-1 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
KO:K09552 EMBL:FO080872 EMBL:AB257343 RefSeq:NP_500191.3
UniGene:Cel.12073 ProteinModelPortal:G5EDB6 SMR:G5EDB6
MEROPS:M41.A12 EnsemblMetazoa:Y38F2AR.7.1
EnsemblMetazoa:Y38F2AR.7.2 GeneID:177021 KEGG:cel:CELE_Y38F2AR.7
CTD:177021 WormBase:Y38F2AR.7 OMA:DKISWSE NextBio:895012
Uniprot:G5EDB6
Length = 747
Score = 452 (164.2 bits), Expect = 4.5e-40, P = 4.5e-40
Identities = 127/400 (31%), Positives = 208/400 (52%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKA+A E+ V F S++ S+FVE+ G+GASR+R L++EA+ AP +++IDE+DA+G
Sbjct: 331 KTLLAKALAAESTVPFISMNGSEFVEVIGGLGASRIRGLFKEARSRAPCIIYIDEIDAIG 390
Query: 502 RERGLIKGSGGQ------ERDATLNQLLVCLDGFEGRGN-VITIASTNRPDILDPALVRP 554
R+R G+GG E + TLNQLLV +DG G GN V+ +ASTNR D+LD AL+RP
Sbjct: 391 RKRSEGAGAGGGFGGGSGEEEQTLNQLLVEMDGM-GSGNGVVVLASTNRADVLDKALLRP 449
Query: 555 GRFDRKIFIPKPGLIGRMEILKVHARKKPMAD-DVDYLA-VASMTDGMVGAELANIVEVA 612
GRFDR I I P ++ R ++ +++ RK + +Y +A++T G GA++ N+ +
Sbjct: 450 GRFDRHISIDLPTVLERKDMFELYMRKIKLDHAPQEYSQRLAALTPGFTGADIMNVCNES 509
Query: 613 AINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQV-AINEAAMAVVAVNFPDL 671
AI + +T D+ A G R E R+V A +EA A+V
Sbjct: 510 AIRAASNKCHVVTHKDMEYALDRVLAGSEKRSRSLVEEEREVVAYHEAGHALVGWMLEHT 569
Query: 672 KNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCG--- 728
+ VTI PR LG+ + + + + S+ L D + + L R A+ L G
Sbjct: 570 DALLKVTIIPRTSAALGFAQ----YSPRDKHLFSKDELFDRMCMMLGGRCAENLKFGRAT 625
Query: 729 ---EGQLSTIWAETADNARSAARTFVLGGLS---DKHFGLSNFWVADRINEIDTEALRIL 782
+ L + + + ++G LS + F + + + D EA I+
Sbjct: 626 SGAQDDLQKVTKSAYAQVKLYGMSSIVGPLSFPNTEGFQIKPY-SKKFASTFDQEATLIV 684
Query: 783 NLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLV 822
E ++++ N + L+ + L++++ L ++ L+
Sbjct: 685 AKANEATTDLIKNNMDKLETIAQALLKREVLNYEDVKKLI 724
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 410 (149.4 bits), Expect = 1.1e-39, Sum P(2) = 1.1e-39
Identities = 87/220 (39%), Positives = 124/220 (56%)
Query: 415 VKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGA 474
+K ++++R G++ KTLLAKAVA G NF AS V+ Y+G A
Sbjct: 201 LKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASGIVDKYIGESA 260
Query: 475 SRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGN 534
+R ++ AK++ P ++F+DE+DA+G R S +E TL +LL +DGF+ G
Sbjct: 261 RIIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTSADREIQRTLMELLTQMDGFDNLGQ 320
Query: 535 VITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVA 594
I +TNRPD LDPAL+RPGR DRK+ IP P GR+EI K+H K + D+ A
Sbjct: 321 TKIIMATNRPDTLDPALLRPGRLDRKVEIPLPNEAGRLEIFKIHTAKVKKTGEFDFEAAV 380
Query: 595 SMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQ 634
M+DG GA++ N A +RD R I DDL++A +
Sbjct: 381 KMSDGFNGADIRNCATEAGFFAIRDDRDHINPDDLMKAVR 420
Score = 43 (20.2 bits), Expect = 1.1e-39, Sum P(2) = 1.1e-39
Identities = 7/35 (20%), Positives = 17/35 (48%)
Query: 283 QKYEESLQDARDNYRYMANVWENLAKDSTVATGLG 317
++Y++ L+ R N R + +++ D +G
Sbjct: 68 RRYDDQLKQRRQNIRDLEKLYDKTENDIKALQSIG 102
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 425 (154.7 bits), Expect = 3.2e-39, P = 3.2e-39
Identities = 90/220 (40%), Positives = 130/220 (59%)
Query: 415 VKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGA 474
+K +++ R G++ KTLLA+AVA GVNF + +S V+ Y+G A
Sbjct: 152 LKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIVDKYIGESA 211
Query: 475 SRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGN 534
+R ++ AK++ P V+F+DE+DA+G R S +E TL +LL +DGF+ G
Sbjct: 212 RIIREMFGYAKEHEPCVIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDYLGQ 271
Query: 535 VITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVA 594
I +TNRPD LDPAL+RPGR DRKI IP P +GRMEILK+H K ++DY A+
Sbjct: 272 TKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVGRMEILKIHLEKVSKQGEIDYEALV 331
Query: 595 SMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQ 634
+TDG GA+L N+V A +++ R + DL+ AA+
Sbjct: 332 KLTDGTNGADLRNVVTEAGFIAIKEDRDYVIQSDLMSAAR 371
>GENEDB_PFALCIPARUM|PF13_0033 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853
GO:GO:0017111 EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 OMA:EHKEVES ProtClustDB:CLSZ2429012
GO:GO:0005838 RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1
PRIDE:Q8IEQ1 EnsemblProtists:PF13_0033:mRNA GeneID:814012
KEGG:pfa:PF13_0033 EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 423 (154.0 bits), Expect = 5.2e-39, P = 5.2e-39
Identities = 94/226 (41%), Positives = 130/226 (57%)
Query: 420 MYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRS 479
+Y+R G++ KTLLA+A+A NF I S V+ Y+G A +R
Sbjct: 162 LYKRVGIKTPKGVLLYGPPGTGKTLLARAMASNINCNFMRIVVSAIVDKYIGESARIIRE 221
Query: 480 LYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIA 539
++ AK++ P ++F+DE+DA+G R S +E TL +LL LDGFE GNV I
Sbjct: 222 MFNYAKEHQPCIIFMDEIDAIGGRRFSQGTSADREIQRTLMELLNHLDGFEELGNVKIIM 281
Query: 540 STNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDG 599
+TNRPD+LDPALVRPGR DRKI IP P R+EILK+HA K D+DY +V + DG
Sbjct: 282 ATNRPDVLDPALVRPGRLDRKIEIPLPNETARIEILKIHANKMTKLGDIDYESVCRLCDG 341
Query: 600 MVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQ-IEERGMLDRK 644
GA+L N+ A + +R R + +D +AA+ I E L+ K
Sbjct: 342 FNGADLRNVCTEAGMFAIRAMRDYVIEEDFYKAARKISEGKKLEGK 387
>UNIPROTKB|Q8IEQ1 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
OMA:EHKEVES ProtClustDB:CLSZ2429012 GO:GO:0005838
RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1 PRIDE:Q8IEQ1
EnsemblProtists:PF13_0033:mRNA GeneID:814012 KEGG:pfa:PF13_0033
EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 423 (154.0 bits), Expect = 5.2e-39, P = 5.2e-39
Identities = 94/226 (41%), Positives = 130/226 (57%)
Query: 420 MYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRS 479
+Y+R G++ KTLLA+A+A NF I S V+ Y+G A +R
Sbjct: 162 LYKRVGIKTPKGVLLYGPPGTGKTLLARAMASNINCNFMRIVVSAIVDKYIGESARIIRE 221
Query: 480 LYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIA 539
++ AK++ P ++F+DE+DA+G R S +E TL +LL LDGFE GNV I
Sbjct: 222 MFNYAKEHQPCIIFMDEIDAIGGRRFSQGTSADREIQRTLMELLNHLDGFEELGNVKIIM 281
Query: 540 STNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDG 599
+TNRPD+LDPALVRPGR DRKI IP P R+EILK+HA K D+DY +V + DG
Sbjct: 282 ATNRPDVLDPALVRPGRLDRKIEIPLPNETARIEILKIHANKMTKLGDIDYESVCRLCDG 341
Query: 600 MVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQ-IEERGMLDRK 644
GA+L N+ A + +R R + +D +AA+ I E L+ K
Sbjct: 342 FNGADLRNVCTEAGMFAIRAMRDYVIEEDFYKAARKISEGKKLEGK 387
>ASPGD|ASPL0000032311 [details] [associations]
symbol:AN5747 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
EnsemblFungi:CADANIAT00003315 Uniprot:C8VFJ3
Length = 393
Score = 414 (150.8 bits), Expect = 5.1e-38, P = 5.1e-38
Identities = 90/231 (38%), Positives = 135/231 (58%)
Query: 415 VKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGA 474
+K ++++R G++ KTLLA+AVA NF + +S V+ Y+G A
Sbjct: 157 LKNPELFQRVGIKPPKGVLLYGPPGTGKTLLARAVASSMETNFLKVVSSAIVDKYIGESA 216
Query: 475 SRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGN 534
+R ++ AK++ P ++F+DE+DA+G R S +E TL +LL LDGF+ G
Sbjct: 217 RLIREMFGYAKEHEPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDYLGK 276
Query: 535 VITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVA 594
I +TNRPD LDPAL+R GR DRKI IP P +GR+EILK+H+ M D+D+ +V
Sbjct: 277 TKIIMATNRPDTLDPALLRAGRLDRKIEIPLPNEVGRLEILKIHSSTVQMEGDIDFESVV 336
Query: 595 SMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQ-IEERGMLDRK 644
M+DG+ GA+L N+V A + ++D R I DD +A + + E L+ K
Sbjct: 337 KMSDGLNGADLRNVVTEAGLFAIKDYRDAINQDDFNRAVRKVAEAKKLEGK 387
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 389 (142.0 bits), Expect = 6.2e-37, Sum P(2) = 6.2e-37
Identities = 86/220 (39%), Positives = 123/220 (55%)
Query: 415 VKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGA 474
+K +++ R G++ KTLLAKAVA G NF AS V+ Y+G A
Sbjct: 192 LKNPELFTRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASAIVDKYIGESA 251
Query: 475 SRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGN 534
+R ++ AK++ P ++F+DE+DA+G R S +E TL +LL +DGF+ G
Sbjct: 252 RLIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLGQ 311
Query: 535 VITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVA 594
I +TNRPD LDPAL+R GR DRKI I P GR+EI K+H K + D+ A
Sbjct: 312 TKIIMATNRPDTLDPALLRAGRLDRKIEIGLPNEAGRLEIFKIHTSKVAKQGEFDFEAAV 371
Query: 595 SMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQ 634
M+DG GA++ N+V A +RD R I +DL++A +
Sbjct: 372 KMSDGFNGADIRNVVTEAGFFAIRDDRDYILQNDLMKAVR 411
Score = 39 (18.8 bits), Expect = 6.2e-37, Sum P(2) = 6.2e-37
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 48 NEDRNKNQNSKRPHLGLLT 66
N D N NQ+S + G T
Sbjct: 14 NADTNNNQDSNNANAGSTT 32
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 388 (141.6 bits), Expect = 1.3e-36, Sum P(2) = 1.3e-36
Identities = 85/219 (38%), Positives = 126/219 (57%)
Query: 415 VKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGA 474
VK +++ G+ KTLLA+AVA F +S S+ V+ Y+G G+
Sbjct: 199 VKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGS 258
Query: 475 SRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS-GGQERDATLNQLLVCLDGFEGRG 533
VR L+ A+++APS++F+DE+D++G +R I+G G E T+ +LL LDGFE
Sbjct: 259 RMVRELFVMAREHAPSIIFMDEIDSIGSQR--IEGEHGDSEVQRTMMELLNQLDGFESTQ 316
Query: 534 NVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAV 593
N+ I TNR DILD AL+RPGR DRKI P P + RMEILK+H+RK + +D L +
Sbjct: 317 NIKVIMCTNRIDILDEALLRPGRIDRKIEFPNPNVEARMEILKIHSRKMNLMRGIDMLKI 376
Query: 594 ASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA 632
A+ + GAE+ + A + +R+ R +T +D A
Sbjct: 377 ATDMNNCSGAEVKAVCTEAGMFALRERRVHVTQEDFEMA 415
Score = 37 (18.1 bits), Expect = 1.3e-36, Sum P(2) = 1.3e-36
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 40 KNQNFNPQNEDRNKNQNS 57
KN N N D NKN ++
Sbjct: 24 KNME-NNNNNDNNKNSSA 40
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 388 (141.6 bits), Expect = 1.3e-36, Sum P(2) = 1.3e-36
Identities = 85/219 (38%), Positives = 126/219 (57%)
Query: 415 VKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGA 474
VK +++ G+ KTLLA+AVA F +S S+ V+ Y+G G+
Sbjct: 199 VKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGS 258
Query: 475 SRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS-GGQERDATLNQLLVCLDGFEGRG 533
VR L+ A+++APS++F+DE+D++G +R I+G G E T+ +LL LDGFE
Sbjct: 259 RMVRELFVMAREHAPSIIFMDEIDSIGSQR--IEGEHGDSEVQRTMMELLNQLDGFESTQ 316
Query: 534 NVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAV 593
N+ I TNR DILD AL+RPGR DRKI P P + RMEILK+H+RK + +D L +
Sbjct: 317 NIKVIMCTNRIDILDEALLRPGRIDRKIEFPNPNVEARMEILKIHSRKMNLMRGIDMLKI 376
Query: 594 ASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA 632
A+ + GAE+ + A + +R+ R +T +D A
Sbjct: 377 ATDMNNCSGAEVKAVCTEAGMFALRERRVHVTQEDFEMA 415
Score = 37 (18.1 bits), Expect = 1.3e-36, Sum P(2) = 1.3e-36
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 40 KNQNFNPQNEDRNKNQNS 57
KN N N D NKN ++
Sbjct: 24 KNME-NNNNNDNNKNSSA 40
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 385 (140.6 bits), Expect = 2.2e-36, Sum P(2) = 2.2e-36
Identities = 86/228 (37%), Positives = 129/228 (56%)
Query: 407 QYLERGVDVKFS--DMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQ 464
Q ++ V++ + ++Y G++ KTLLAKAVA E F + S+
Sbjct: 203 QEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANETSATFLRVVGSE 262
Query: 465 FVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLV 524
++ Y+G G VR +++ A+++APS+VFIDE+DAVG +R G +E T+ +LL
Sbjct: 263 LIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKRYEATSGGEREIQRTMLELLN 322
Query: 525 CLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPM 584
LDGF+ RG+V I +TNR D LDPAL+RPGR DRKI +P P + I ++H K M
Sbjct: 323 QLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNPDTKTKRRIFQIHTSKMTM 382
Query: 585 ADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA 632
+ DVD D + GA++ I A + +R+ R +IT DL +A
Sbjct: 383 SPDVDLEEFVMSKDELSGADIKAICTEAGLLALRERRMKITQADLRKA 430
Score = 38 (18.4 bits), Expect = 2.2e-36, Sum P(2) = 2.2e-36
Identities = 9/37 (24%), Positives = 19/37 (51%)
Query: 35 TPFSCKNQ-NFNPQNEDRNKNQNSKRPHLGLLTIPVT 70
TP N F + ED++K ++ + L ++P++
Sbjct: 4 TPGGMNNPYGFLGKKEDKDKGKDKDKEKKKLESVPIS 40
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 385 (140.6 bits), Expect = 2.2e-36, Sum P(2) = 2.2e-36
Identities = 86/228 (37%), Positives = 129/228 (56%)
Query: 407 QYLERGVDVKFS--DMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQ 464
Q ++ V++ + ++Y G++ KTLLAKAVA E F + S+
Sbjct: 203 QEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANETSATFLRVVGSE 262
Query: 465 FVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLV 524
++ Y+G G VR +++ A+++APS+VFIDE+DAVG +R G +E T+ +LL
Sbjct: 263 LIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKRYEATSGGEREIQRTMLELLN 322
Query: 525 CLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPM 584
LDGF+ RG+V I +TNR D LDPAL+RPGR DRKI +P P + I ++H K M
Sbjct: 323 QLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNPDTKTKRRIFQIHTSKMTM 382
Query: 585 ADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA 632
+ DVD D + GA++ I A + +R+ R +IT DL +A
Sbjct: 383 SPDVDLEEFVMSKDELSGADIKAICTEAGLLALRERRMKITQADLRKA 430
Score = 38 (18.4 bits), Expect = 2.2e-36, Sum P(2) = 2.2e-36
Identities = 9/37 (24%), Positives = 19/37 (51%)
Query: 35 TPFSCKNQ-NFNPQNEDRNKNQNSKRPHLGLLTIPVT 70
TP N F + ED++K ++ + L ++P++
Sbjct: 4 TPGGMNNPYGFLGKKEDKDKGKDKDKEKKKLESVPIS 40
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 398 (145.2 bits), Expect = 2.8e-36, P = 2.8e-36
Identities = 88/239 (36%), Positives = 134/239 (56%)
Query: 403 KGLPQYLERGVDVKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISA 462
K + + +E + VK +++ G+ KTLLA+AVA F +S
Sbjct: 155 KEIKEVIE--LPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHHTDCKFIRVSG 212
Query: 463 SQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKG-SGGQERDATLNQ 521
S+ V+ Y+G G+ VR L+ A+++APS++F+DE+D++G R G SG E T+ +
Sbjct: 213 SELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRSDSSGGSGDSEVQRTMLE 272
Query: 522 LLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARK 581
LL LDGFE N+ I +TNR DILDPAL+RPGR DRKI P P R EIL++H+R
Sbjct: 273 LLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPSAEARAEILRIHSRS 332
Query: 582 KPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDL-LQAAQIEERG 639
+ +D ++A +G GAEL + A + +R+ R +T +D L A++ +G
Sbjct: 333 MNLTRGIDLKSIAEKMNGASGAELKGVCTEAGMFALRERRVHVTQEDFELAVAKVLNKG 391
>SGD|S000005643 [details] [associations]
symbol:RPT5 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005643 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006948 GO:GO:0006511 GO:GO:0017111 EMBL:X90518 EMBL:X94335
GO:GO:0045899 GeneTree:ENSGT00560000077230 GO:GO:0070682
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
GO:GO:0008540 PDB:4B4T PDBsum:4B4T OMA:GALMYGP OrthoDB:EOG40VZZ2
EMBL:X73569 EMBL:Z75025 PIR:S46605 RefSeq:NP_014760.3
RefSeq:NP_014762.3 ProteinModelPortal:P33297 SMR:P33297
DIP:DIP-1590N IntAct:P33297 MINT:MINT-383887 STRING:P33297
PaxDb:P33297 PeptideAtlas:P33297 EnsemblFungi:YOR117W GeneID:854284
GeneID:854286 KEGG:sce:YOR117W KEGG:sce:YOR119C KO:K07178
NextBio:976260 Genevestigator:P33297 GermOnline:YOR117W
Uniprot:P33297
Length = 434
Score = 398 (145.2 bits), Expect = 2.8e-36, P = 2.8e-36
Identities = 87/241 (36%), Positives = 140/241 (58%)
Query: 404 GLPQYLERGVD-----VKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFF 458
GL + +E V+ +K +D ++ G+R KTLLA+A A + F
Sbjct: 185 GLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGPPGTGKTLLARACAAQTNATFL 244
Query: 459 SISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDAT 518
++A Q V++Y+G GA VR + AK+ AP+++FIDELDA+G +R + SG +E T
Sbjct: 245 KLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSEKSGDREVQRT 304
Query: 519 LNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVH 578
+ +LL LDGF V +A+TNR D+LDPAL+R GR DRKI P P R +IL++H
Sbjct: 305 MLELLNQLDGFSSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSEDSRAQILQIH 364
Query: 579 ARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA-AQIEE 637
+RK DD+++ +A TD GA+L + A + +R+G++ + +D ++ ++++
Sbjct: 365 SRKMTTDDDINWQELARSTDEFNGAQLKAVTVEAGMIALRNGQSSVKHEDFVEGISEVQA 424
Query: 638 R 638
R
Sbjct: 425 R 425
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 397 (144.8 bits), Expect = 3.6e-36, P = 3.6e-36
Identities = 85/232 (36%), Positives = 134/232 (57%)
Query: 403 KGLPQYLERGVDVKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISA 462
K + + +E + +K +++ G+ KTLLA+AVA F +S
Sbjct: 155 KEIKEVIE--LPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG 212
Query: 463 SQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDA--TLN 520
S+ V+ Y+G G+ VR L+ A+++APS++F+DE+D++G RG GSGG + + T+
Sbjct: 213 SELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGSSRGE-SGSGGGDSEVQRTML 271
Query: 521 QLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHAR 580
+LL LDGFE N+ + TNR DILDPAL+RPGR DRKI P PG GR++ILK+H+R
Sbjct: 272 ELLNQLDGFESTKNIKVLMCTNRIDILDPALLRPGRIDRKIEFPNPGDAGRLDILKIHSR 331
Query: 581 KKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA 632
K + ++ ++ +G GAEL + A + +R+ R ++ +D A
Sbjct: 332 KMNLTRGINLKKISDKMNGASGAELKAVCTEAGMYALRERRVHVSQEDFEMA 383
>DICTYBASE|DDB_G0284517 [details] [associations]
symbol:psmC6 "26S protease regulatory subunit S10B"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0284517
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000153_GR
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
EMBL:AAFI02000066 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
RefSeq:XP_638541.1 ProteinModelPortal:Q54PJ1 STRING:Q54PJ1
EnsemblProtists:DDB0232968 GeneID:8624634 KEGG:ddi:DDB_G0284517
OMA:HAANITK ProtClustDB:CLSZ2429012 Uniprot:Q54PJ1
Length = 393
Score = 392 (143.0 bits), Expect = 1.3e-35, P = 1.3e-35
Identities = 85/227 (37%), Positives = 129/227 (56%)
Query: 419 DMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVR 478
+++ R G++ KTLLA+A+A NF + +S V+ Y+G A +R
Sbjct: 161 ELFIRVGIKAPKGVLLYGPPGTGKTLLARAIASNLEANFLKVVSSAIVDKYIGESARVIR 220
Query: 479 SLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITI 538
++ A+D+ P V+F+DE+DA+G R S +E TL +LL +DGF+ V I
Sbjct: 221 EMFGYARDHQPCVIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLSKVKII 280
Query: 539 ASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTD 598
+TNRPD+LDPAL+RPGR DRKI IP P GR+++LK+HA DVDY A+A + D
Sbjct: 281 MATNRPDVLDPALLRPGRLDRKIEIPLPNEAGRVDVLKIHAANITKHGDVDYEAIAKLAD 340
Query: 599 GMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQ-IEERGMLDRK 644
G A+L N+ A + +R R + +D ++A + +E L+ K
Sbjct: 341 GFNAADLRNVCTEAGMFAIRAERDYVMEEDFMKAVRKCQEAKKLEGK 387
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 391 (142.7 bits), Expect = 1.6e-35, P = 1.6e-35
Identities = 86/234 (36%), Positives = 132/234 (56%)
Query: 403 KGLPQYLERGVDVKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISA 462
K + + +E G+ K +++ G+ KTLLA+AVA F +S
Sbjct: 142 KEIKEVIELGL--KHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCRFIRVSG 199
Query: 463 SQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQL 522
S+ V+ Y+G G+ VR L+ A+++APS++F+DE+D++G R GSG E T+ +L
Sbjct: 200 SELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIDSAGSGDSEVQRTMLEL 259
Query: 523 LVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKK 582
L LDGFE N+ I +TNR DILDPAL+RPGR DRKI P P + R +IL++H+R
Sbjct: 260 LNQLDGFEPTKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVEARADILRIHSRSM 319
Query: 583 PMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDL-LQAAQI 635
+ ++ +A +G GAEL + A + +R+ R +T +D L A+I
Sbjct: 320 NLTRGINLTKIAEKMNGCSGAELKGVCTEAGMYALRERRVHVTQEDFDLATAKI 373
>FB|FBgn0028685 [details] [associations]
symbol:Rpt4 "Regulatory particle triple-A ATPase 4"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:1901838 "positive regulation of transcription of nuclear large
rRNA transcript from RNA polymerase I promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001163 "RNA polymerase I
regulatory region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 GO:GO:0022008
GO:GO:0006508 GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 HSSP:Q01853
TIGRFAMs:TIGR01242 GO:GO:0008540 EMBL:AY071182
ProteinModelPortal:Q8SZ19 SMR:Q8SZ19 IntAct:Q8SZ19 STRING:Q8SZ19
PRIDE:Q8SZ19 FlyBase:FBgn0028685 InParanoid:Q8SZ19
OrthoDB:EOG43TX9X ChiTaRS:Rpt4 ArrayExpress:Q8SZ19 Bgee:Q8SZ19
Uniprot:Q8SZ19
Length = 397
Score = 391 (142.7 bits), Expect = 1.6e-35, P = 1.6e-35
Identities = 82/204 (40%), Positives = 122/204 (59%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+AVA + NF + +S V+ Y+G A +R ++ A+D+ P ++F+DE+DA+G
Sbjct: 188 KTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIG 247
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
R S +E TL +LL +DGF+ G V I +TNRPD LDPAL+RPGR DRKI
Sbjct: 248 GRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDSLDPALLRPGRLDRKI 307
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
IP P R+EILK+HA K ++DY A+ ++D GA+L N+ A + +R R
Sbjct: 308 EIPLPNEQARLEILKIHALKIAKHGEIDYEAIVKLSDNFNGADLRNVCTEAGLFAIRAER 367
Query: 622 TEITTDDLLQAAQ-IEERGMLDRK 644
+ D ++A + + + L+ K
Sbjct: 368 EYVIQGDFMKAVRKVSDNKKLESK 391
>FB|FBgn0036224 [details] [associations]
symbol:Rpt4R "Regulatory particle triple-A ATPase 4-related"
species:7227 "Drosophila melanogaster" [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014296
GO:GO:0006200 GO:GO:0006974 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 EMBL:AY089267 RefSeq:NP_648525.1
UniGene:Dm.5141 SMR:Q9VTQ9 IntAct:Q9VTQ9 MINT:MINT-869141
STRING:Q9VTQ9 EnsemblMetazoa:FBtr0076040 GeneID:39351
KEGG:dme:Dmel_CG7257 UCSC:CG7257-RA CTD:39351 FlyBase:FBgn0036224
InParanoid:Q9VTQ9 OMA:CAIWTEA OrthoDB:EOG4VT4CM GenomeRNAi:39351
NextBio:813228 Uniprot:Q9VTQ9
Length = 398
Score = 390 (142.3 bits), Expect = 2.1e-35, P = 2.1e-35
Identities = 83/207 (40%), Positives = 123/207 (59%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+A+A + NF + +S V+ Y+G A +R ++ A+D+ P ++F+DE+DA+G
Sbjct: 189 KTLLARAIASQMDANFLKVVSSAIVDKYIGESARLIREMFAYARDHQPCIIFMDEIDAIG 248
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
R S +E TL +LL +DGF+ G V I +TNRPD LDPAL+RPGR DRK+
Sbjct: 249 GRRFSEGTSADREIQRTLMELLNQMDGFDALGQVKMIMATNRPDTLDPALLRPGRLDRKL 308
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
IP P + RM+ILK+HA ++DY AV ++D GA+L NI A + +R R
Sbjct: 309 EIPLPNEVARMDILKIHAEPLNKRGEIDYEAVVKLSDLFNGADLRNICTEAGLFALRCDR 368
Query: 622 TEITTDDLLQAAQIEERGMLDRKERSS 648
+ +D ++A R + D K+ S
Sbjct: 369 EFVIQEDFMKAV----RKIADNKKLES 391
>UNIPROTKB|Q9FXT8 [details] [associations]
symbol:OsRPT4 "Os02g0199900 protein" species:39947 "Oryza
sativa Japonica Group" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0005618
GO:GO:0005730 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:AP008208
EMBL:CM000139 KO:K03064 EMBL:AP004869 TIGRFAMs:TIGR01242
OMA:EHKEVES GO:GO:0008540 ProtClustDB:CLSN2679874 EMBL:AP004812
EMBL:AB033536 RefSeq:NP_001046218.1 UniGene:Os.292 IntAct:Q9FXT8
STRING:Q9FXT8 EnsemblPlants:LOC_Os02g10640.1 GeneID:4328642
KEGG:osa:4328642 Uniprot:Q9FXT8
Length = 400
Score = 390 (142.3 bits), Expect = 2.1e-35, P = 2.1e-35
Identities = 82/216 (37%), Positives = 124/216 (57%)
Query: 419 DMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVR 478
+++ R G++ KTLLA+A+A NF I +S ++ Y+G A +R
Sbjct: 164 ELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKIVSSAIIDKYIGESARLIR 223
Query: 479 SLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITI 538
++ A+D+ P ++F+DE+DA+G R S +E TL +LL LDGF+ G V I
Sbjct: 224 EMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDELGKVKMI 283
Query: 539 ASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTD 598
+TNRPD+LDPAL+RPGR DRKI IP P RME+LK+HA ++DY AV + +
Sbjct: 284 MATNRPDVLDPALLRPGRLDRKIEIPLPNEQARMEVLKIHAAGIAKHGEIDYEAVVKLAE 343
Query: 599 GMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQ 634
G GA+L N+ A + +R R + +D ++A +
Sbjct: 344 GFNGADLRNVCTEAGMAAIRAERDYVVHEDFMKAVR 379
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 389 (142.0 bits), Expect = 2.7e-35, P = 2.7e-35
Identities = 87/252 (34%), Positives = 142/252 (56%)
Query: 403 KGLPQYLERGVDVKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISA 462
K + + +E + VK +++ G+ KTLLA+AVA F +S
Sbjct: 158 KEIKEVIE--LPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 215
Query: 463 SQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQ-ERDATLNQ 521
S+ V+ ++G G+ VR L+ A+++APS++F+DE+D++G R + GSGG E T+ +
Sbjct: 216 SELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSR-IESGSGGDSEVQRTMLE 274
Query: 522 LLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARK 581
LL LDGFE N+ I +TNR DILDPAL+RPGR DRKI P P R++ILK+H+RK
Sbjct: 275 LLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRK 334
Query: 582 KPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA-AQIEERGM 640
+ ++ +A + G GAE+ + A + +R+ R +T +D A A++ ++
Sbjct: 335 MNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDS 394
Query: 641 LDRKERSSETWR 652
++ + W+
Sbjct: 395 -EKNMSIKKLWK 405
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 387 (141.3 bits), Expect = 4.5e-35, P = 4.5e-35
Identities = 88/252 (34%), Positives = 141/252 (55%)
Query: 403 KGLPQYLERGVDVKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISA 462
K + + +E + VK +++ G+ KTLLA+AVA F +S
Sbjct: 165 KEIKEVIE--LPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG 222
Query: 463 SQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQ-ERDATLNQ 521
S+ V+ ++G GA VR L+ A+++APS++F+DE+D++G R L GSGG E T+ +
Sbjct: 223 SELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR-LEGGSGGDSEVQRTMLE 281
Query: 522 LLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARK 581
LL LDGFE N+ I +TNR DILD AL+RPGR DRKI P P R++ILK+H+RK
Sbjct: 282 LLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRK 341
Query: 582 KPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA-AQIEERGM 640
+ ++ +A + G GAE+ + A + +R+ R +T +D A A++ ++
Sbjct: 342 MNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDS 401
Query: 641 LDRKERSSETWR 652
++ + W+
Sbjct: 402 -EKNMSIKKLWK 412
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 387 (141.3 bits), Expect = 4.5e-35, P = 4.5e-35
Identities = 88/252 (34%), Positives = 141/252 (55%)
Query: 403 KGLPQYLERGVDVKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISA 462
K + + +E + VK +++ G+ KTLLA+AVA F +S
Sbjct: 159 KEIKEVIE--LPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG 216
Query: 463 SQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQ-ERDATLNQ 521
S+ V+ ++G GA VR L+ A+++APS++F+DE+D++G R L GSGG E T+ +
Sbjct: 217 SELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR-LEGGSGGDSEVQRTMLE 275
Query: 522 LLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARK 581
LL LDGFE N+ I +TNR DILD AL+RPGR DRKI P P R++ILK+H+RK
Sbjct: 276 LLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRK 335
Query: 582 KPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA-AQIEERGM 640
+ ++ +A + G GAE+ + A + +R+ R +T +D A A++ ++
Sbjct: 336 MNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDS 395
Query: 641 LDRKERSSETWR 652
++ + W+
Sbjct: 396 -EKNMSIKKLWK 406
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 387 (141.3 bits), Expect = 4.5e-35, P = 4.5e-35
Identities = 88/252 (34%), Positives = 141/252 (55%)
Query: 403 KGLPQYLERGVDVKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISA 462
K + + +E + VK +++ G+ KTLLA+AVA F +S
Sbjct: 159 KEIKEVIE--LPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG 216
Query: 463 SQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQ-ERDATLNQ 521
S+ V+ ++G GA VR L+ A+++APS++F+DE+D++G R L GSGG E T+ +
Sbjct: 217 SELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR-LEGGSGGDSEVQRTMLE 275
Query: 522 LLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARK 581
LL LDGFE N+ I +TNR DILD AL+RPGR DRKI P P R++ILK+H+RK
Sbjct: 276 LLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRK 335
Query: 582 KPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA-AQIEERGM 640
+ ++ +A + G GAE+ + A + +R+ R +T +D A A++ ++
Sbjct: 336 MNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDS 395
Query: 641 LDRKERSSETWR 652
++ + W+
Sbjct: 396 -EKNMSIKKLWK 406
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 387 (141.3 bits), Expect = 4.5e-35, P = 4.5e-35
Identities = 88/252 (34%), Positives = 141/252 (55%)
Query: 403 KGLPQYLERGVDVKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISA 462
K + + +E + VK +++ G+ KTLLA+AVA F +S
Sbjct: 159 KEIKEVIE--LPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG 216
Query: 463 SQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQ-ERDATLNQ 521
S+ V+ ++G GA VR L+ A+++APS++F+DE+D++G R L GSGG E T+ +
Sbjct: 217 SELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR-LEGGSGGDSEVQRTMLE 275
Query: 522 LLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARK 581
LL LDGFE N+ I +TNR DILD AL+RPGR DRKI P P R++ILK+H+RK
Sbjct: 276 LLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRK 335
Query: 582 KPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA-AQIEERGM 640
+ ++ +A + G GAE+ + A + +R+ R +T +D A A++ ++
Sbjct: 336 MNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDS 395
Query: 641 LDRKERSSETWR 652
++ + W+
Sbjct: 396 -EKNMSIKKLWK 406
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 387 (141.3 bits), Expect = 4.5e-35, P = 4.5e-35
Identities = 88/252 (34%), Positives = 141/252 (55%)
Query: 403 KGLPQYLERGVDVKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISA 462
K + + +E + VK +++ G+ KTLLA+AVA F +S
Sbjct: 159 KEIKEVIE--LPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG 216
Query: 463 SQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQ-ERDATLNQ 521
S+ V+ ++G GA VR L+ A+++APS++F+DE+D++G R L GSGG E T+ +
Sbjct: 217 SELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR-LEGGSGGDSEVQRTMLE 275
Query: 522 LLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARK 581
LL LDGFE N+ I +TNR DILD AL+RPGR DRKI P P R++ILK+H+RK
Sbjct: 276 LLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRK 335
Query: 582 KPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA-AQIEERGM 640
+ ++ +A + G GAE+ + A + +R+ R +T +D A A++ ++
Sbjct: 336 MNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDS 395
Query: 641 LDRKERSSETWR 652
++ + W+
Sbjct: 396 -EKNMSIKKLWK 406
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 387 (141.3 bits), Expect = 4.5e-35, P = 4.5e-35
Identities = 88/252 (34%), Positives = 141/252 (55%)
Query: 403 KGLPQYLERGVDVKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISA 462
K + + +E + VK +++ G+ KTLLA+AVA F +S
Sbjct: 167 KEIKEVIE--LPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG 224
Query: 463 SQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQ-ERDATLNQ 521
S+ V+ ++G GA VR L+ A+++APS++F+DE+D++G R L GSGG E T+ +
Sbjct: 225 SELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR-LEGGSGGDSEVQRTMLE 283
Query: 522 LLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARK 581
LL LDGFE N+ I +TNR DILD AL+RPGR DRKI P P R++ILK+H+RK
Sbjct: 284 LLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRK 343
Query: 582 KPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA-AQIEERGM 640
+ ++ +A + G GAE+ + A + +R+ R +T +D A A++ ++
Sbjct: 344 MNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDS 403
Query: 641 LDRKERSSETWR 652
++ + W+
Sbjct: 404 -EKNMSIKKLWK 414
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 387 (141.3 bits), Expect = 4.5e-35, P = 4.5e-35
Identities = 88/252 (34%), Positives = 141/252 (55%)
Query: 403 KGLPQYLERGVDVKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISA 462
K + + +E + VK +++ G+ KTLLA+AVA F +S
Sbjct: 167 KEIKEVIE--LPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG 224
Query: 463 SQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQ-ERDATLNQ 521
S+ V+ ++G GA VR L+ A+++APS++F+DE+D++G R L GSGG E T+ +
Sbjct: 225 SELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR-LEGGSGGDSEVQRTMLE 283
Query: 522 LLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARK 581
LL LDGFE N+ I +TNR DILD AL+RPGR DRKI P P R++ILK+H+RK
Sbjct: 284 LLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRK 343
Query: 582 KPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA-AQIEERGM 640
+ ++ +A + G GAE+ + A + +R+ R +T +D A A++ ++
Sbjct: 344 MNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDS 403
Query: 641 LDRKERSSETWR 652
++ + W+
Sbjct: 404 -EKNMSIKKLWK 414
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 387 (141.3 bits), Expect = 4.5e-35, P = 4.5e-35
Identities = 88/252 (34%), Positives = 141/252 (55%)
Query: 403 KGLPQYLERGVDVKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISA 462
K + + +E + VK +++ G+ KTLLA+AVA F +S
Sbjct: 159 KEIKEVIE--LPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG 216
Query: 463 SQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQ-ERDATLNQ 521
S+ V+ ++G GA VR L+ A+++APS++F+DE+D++G R L GSGG E T+ +
Sbjct: 217 SELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR-LEGGSGGDSEVQRTMLE 275
Query: 522 LLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARK 581
LL LDGFE N+ I +TNR DILD AL+RPGR DRKI P P R++ILK+H+RK
Sbjct: 276 LLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRK 335
Query: 582 KPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA-AQIEERGM 640
+ ++ +A + G GAE+ + A + +R+ R +T +D A A++ ++
Sbjct: 336 MNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDS 395
Query: 641 LDRKERSSETWR 652
++ + W+
Sbjct: 396 -EKNMSIKKLWK 406
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 387 (141.3 bits), Expect = 4.5e-35, P = 4.5e-35
Identities = 88/252 (34%), Positives = 141/252 (55%)
Query: 403 KGLPQYLERGVDVKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISA 462
K + + +E + VK +++ G+ KTLLA+AVA F +S
Sbjct: 159 KEIKEVIE--LPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG 216
Query: 463 SQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQ-ERDATLNQ 521
S+ V+ ++G GA VR L+ A+++APS++F+DE+D++G R L GSGG E T+ +
Sbjct: 217 SELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR-LEGGSGGDSEVQRTMLE 275
Query: 522 LLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARK 581
LL LDGFE N+ I +TNR DILD AL+RPGR DRKI P P R++ILK+H+RK
Sbjct: 276 LLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRK 335
Query: 582 KPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA-AQIEERGM 640
+ ++ +A + G GAE+ + A + +R+ R +T +D A A++ ++
Sbjct: 336 MNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDS 395
Query: 641 LDRKERSSETWR 652
++ + W+
Sbjct: 396 -EKNMSIKKLWK 406
>SGD|S000002165 [details] [associations]
symbol:RPT2 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IDA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IDA] [GO:0043171 "peptide
catabolic process" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002165 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0016887 GO:GO:0043171 GO:GO:0006511
GO:GO:0045732 EMBL:Z48432 GO:GO:0070682 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T
PDBsum:4B4T KO:K03062 OMA:FIRNQER GeneTree:ENSGT00550000074818
OrthoDB:EOG4FN7S6 EMBL:X81070 EMBL:L17040 EMBL:Z74055 PIR:S46613
RefSeq:NP_010277.1 ProteinModelPortal:P40327 SMR:P40327
DIP:DIP-6282N IntAct:P40327 MINT:MINT-632695 STRING:P40327
PaxDb:P40327 PeptideAtlas:P40327 PRIDE:P40327 EnsemblFungi:YDL007W
GeneID:851557 KEGG:sce:YDL007W NextBio:968983 Genevestigator:P40327
GermOnline:YDL007W Uniprot:P40327
Length = 437
Score = 387 (141.3 bits), Expect = 4.5e-35, P = 4.5e-35
Identities = 85/245 (34%), Positives = 139/245 (56%)
Query: 407 QYLERGVDVKFS--DMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQ 464
Q ++ V++ + ++Y G++ KTLLAKAVA + F I S+
Sbjct: 192 QEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSE 251
Query: 465 FVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLV 524
++ Y+G G R +++ A +NAPS+VFIDE+DA+G +R G +E T+ +LL
Sbjct: 252 LIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLN 311
Query: 525 CLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPM 584
LDGF+ RG+V I +TN+ + LDPAL+RPGR DRKI P L + +IL +H K +
Sbjct: 312 QLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENPDLSTKKKILGIHTSKMNL 371
Query: 585 ADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRK 644
++DV+ + + D + GA++ + A + +R+ R ++T +D QA +ER M ++
Sbjct: 372 SEDVNLETLVTTKDDLSGADIQAMCTEAGLLALRERRMQVTAEDFKQA---KERVMKNKV 428
Query: 645 ERSSE 649
E + E
Sbjct: 429 EENLE 433
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 387 (141.3 bits), Expect = 4.5e-35, P = 4.5e-35
Identities = 88/252 (34%), Positives = 141/252 (55%)
Query: 403 KGLPQYLERGVDVKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISA 462
K + + +E + VK +++ G+ KTLLA+AVA F +S
Sbjct: 159 KEIKEVIE--LPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG 216
Query: 463 SQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQ-ERDATLNQ 521
S+ V+ ++G GA VR L+ A+++APS++F+DE+D++G R L GSGG E T+ +
Sbjct: 217 SELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR-LEGGSGGDSEVQRTMLE 275
Query: 522 LLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARK 581
LL LDGFE N+ I +TNR DILD AL+RPGR DRKI P P R++ILK+H+RK
Sbjct: 276 LLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRK 335
Query: 582 KPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA-AQIEERGM 640
+ ++ +A + G GAE+ + A + +R+ R +T +D A A++ ++
Sbjct: 336 MNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDS 395
Query: 641 LDRKERSSETWR 652
++ + W+
Sbjct: 396 -EKNMSIKKLWK 406
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 386 (140.9 bits), Expect = 5.7e-35, P = 5.7e-35
Identities = 83/228 (36%), Positives = 133/228 (58%)
Query: 403 KGLPQYLERGVDVKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISA 462
K + + +E + VK +++ G+ KTLLA+AVA F +S
Sbjct: 158 KEIKEVIE--LPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTDCKFIRVSG 215
Query: 463 SQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDA--TLN 520
++ V+ Y+G G+ VR L+ A+++APS++F+DE+D++G R ++GSGG + + T+
Sbjct: 216 AELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTR--VEGSGGGDSEVQRTML 273
Query: 521 QLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHAR 580
+LL LDGFE N+ I +TNR DILDPAL+RPGR DRKI P P + R EIL++H+R
Sbjct: 274 ELLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVAARAEILRIHSR 333
Query: 581 KKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDD 628
K + ++ VA +G GA++ + A + +R+ R +T +D
Sbjct: 334 KMNLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQED 381
>TAIR|locus:2159996 [details] [associations]
symbol:RPT4A "regulatory particle triple-A ATPase 4A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AB008264 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123393 EMBL:AF372945 EMBL:AY078040 EMBL:AK220732
IPI:IPI00547512 RefSeq:NP_199115.1 UniGene:At.6532
ProteinModelPortal:Q9SEI3 SMR:Q9SEI3 IntAct:Q9SEI3 STRING:Q9SEI3
PaxDb:Q9SEI3 PRIDE:Q9SEI3 EnsemblPlants:AT5G43010.1 GeneID:834316
KEGG:ath:AT5G43010 GeneFarm:2749 TAIR:At5g43010 InParanoid:Q9SEI3
OMA:NAPFDPE PhylomeDB:Q9SEI3 ProtClustDB:CLSN2679874 Uniprot:Q9SEI3
Length = 399
Score = 385 (140.6 bits), Expect = 7.4e-35, P = 7.4e-35
Identities = 80/216 (37%), Positives = 124/216 (57%)
Query: 419 DMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVR 478
+++ R G++ KTLLA+A+A NF + +S ++ Y+G A +R
Sbjct: 163 ELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIR 222
Query: 479 SLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITI 538
++ A+++ P ++F+DE+DA+G R S +E TL +LL LDGF+ G V I
Sbjct: 223 EMFNYAREHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDNLGKVKMI 282
Query: 539 ASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTD 598
+TNRPD+LDPAL+RPGR DRKI IP P RM+ILK+HA ++DY A+ + +
Sbjct: 283 MATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMDILKIHAAGIAKHGEIDYEAIVKLAE 342
Query: 599 GMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQ 634
G GA+L NI A + +R R + +D ++A +
Sbjct: 343 GFNGADLRNICTEAGMFAIRAERDYVIHEDFMKAVR 378
>TAIR|locus:2028200 [details] [associations]
symbol:AT1G45000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0030244
"cellulose biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 GO:GO:0005618 GO:GO:0005730 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AC007915 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
ProtClustDB:CLSN2679874 EMBL:AY062709 EMBL:AY114673 IPI:IPI00531336
RefSeq:NP_175120.1 UniGene:At.27257 ProteinModelPortal:Q9MAK9
SMR:Q9MAK9 IntAct:Q9MAK9 STRING:Q9MAK9 PaxDb:Q9MAK9 PRIDE:Q9MAK9
EnsemblPlants:AT1G45000.1 GeneID:841065 KEGG:ath:AT1G45000
GeneFarm:2760 TAIR:At1g45000 InParanoid:Q9MAK9 PhylomeDB:Q9MAK9
Uniprot:Q9MAK9
Length = 399
Score = 384 (140.2 bits), Expect = 9.5e-35, P = 9.5e-35
Identities = 81/216 (37%), Positives = 124/216 (57%)
Query: 419 DMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVR 478
+++ R G++ KTLLA+A+A NF + +S ++ Y+G A +R
Sbjct: 163 ELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIR 222
Query: 479 SLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITI 538
++ A+++ P ++F+DE+DA+G R S +E TL +LL LDGF+ G V I
Sbjct: 223 EMFNYAREHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMI 282
Query: 539 ASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTD 598
+TNRPD+LDPAL+RPGR DRKI IP P RMEILK+HA ++DY A+ + +
Sbjct: 283 MATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHASGIAKHGEIDYEAIVKLGE 342
Query: 599 GMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQ 634
G GA+L NI A + +R R + +D ++A +
Sbjct: 343 GFNGADLRNICTEAGMFAIRAERDYVIHEDFMKAVR 378
>WB|WBGene00015688 [details] [associations]
symbol:C10G11.8 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 HSSP:Q9LCZ4 EMBL:FO080499 PIR:D87802
RefSeq:NP_491811.1 ProteinModelPortal:P91025 SMR:P91025
STRING:P91025 PaxDb:P91025 EnsemblMetazoa:C10G11.8 GeneID:172324
KEGG:cel:CELE_C10G11.8 UCSC:C10G11.8 CTD:172324 WormBase:C10G11.8
InParanoid:P91025 OMA:RGIENAN NextBio:875027 Uniprot:P91025
Length = 438
Score = 367 (134.2 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
Identities = 90/230 (39%), Positives = 120/230 (52%)
Query: 407 QYLERGVDVKFS--DMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQ 464
Q L+ V++ + + Y G+ KTLLAKAVA F + S
Sbjct: 193 QELKESVELPLTHPEYYEEMGITAPKGVILYGEPGTGKTLLAKAVANSTSATFIRATGSD 252
Query: 465 FVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLV 524
V+ G GA VR ++Q AK+ APS+VFIDE+DAVG +R G QE TL +LL
Sbjct: 253 LVQKQSGEGARLVRQIFQMAKEQAPSIVFIDEIDAVGTKRFDTSSRGEQEVQRTLLELLN 312
Query: 525 CLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPM 584
LDGFE RG+V I +TNR D LDPAL+RPGR DRKI +PKP R +I +H +
Sbjct: 313 QLDGFESRGDVKIIMATNRIDSLDPALIRPGRIDRKIELPKPDEKTRQKIFTIHTSGMTI 372
Query: 585 ADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQ 634
V Y V + GAE+ + A + +R R + TDD +A +
Sbjct: 373 QKAVTYENVLGKEKSISGAEIKAVCTEAGMLALRAQRKCVGTDDFEKAVK 422
Score = 41 (19.5 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 108 EQLKKWSKDLPIVSDRIAYTEIFSLKDEGKLKHVIKSPSGSLRQKAEPVLVVLEDSRVLR 167
+QL + + P R+ E+F DE KH + GS R+ P+L ++ D +LR
Sbjct: 86 QQLVQSLRGTPTTLARVH--ELFD--DE---KHAVVVVEGSRREWYVPILSIV-DKDLLR 137
>UNIPROTKB|O42586 [details] [associations]
symbol:psmc3-b "26S protease regulatory subunit 6A-B"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 EMBL:Y10460 UniGene:Xl.113 ProteinModelPortal:O42586
Xenbase:XB-GENE-1009853 Uniprot:O42586
Length = 404
Score = 383 (139.9 bits), Expect = 1.2e-34, P = 1.2e-34
Identities = 81/190 (42%), Positives = 118/190 (62%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+A A + F ++ Q V++++G GA VR + AK+ APS++FIDELDA+G
Sbjct: 198 KTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFSLAKEKAPSIIFIDELDAIG 257
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R + +G +E T+ +LL LDGF+ V IA+TNR DILDPAL+R GR DRKI
Sbjct: 258 NKRFDSEKAGDREVQRTMLELLNQLDGFQPTTQVKVIAATNRVDILDPALLRSGRLDRKI 317
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
P P R I+++H+RK ++ DV+Y +A TD GA+ + A I +R G
Sbjct: 318 EFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGIIALRRGA 377
Query: 622 TEITTDDLLQ 631
TE+T +D ++
Sbjct: 378 TELTHEDYME 387
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 383 (139.9 bits), Expect = 1.2e-34, P = 1.2e-34
Identities = 82/216 (37%), Positives = 124/216 (57%)
Query: 419 DMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVR 478
++++R G+ KTLLA+AVA + NF + +S V+ Y+G A +R
Sbjct: 174 ELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIR 233
Query: 479 SLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITI 538
++ A+D+ P +VF+DE+DA+G R S +E TL +LL LDGF+ G V I
Sbjct: 234 EMFNYARDHQPCIVFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVI 293
Query: 539 ASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTD 598
+TNRPD LDPAL+RPGR DRKI I P R+EILK+H+ K ++D+ AV ++D
Sbjct: 294 MATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKITKHGEIDFEAVVKLSD 353
Query: 599 GMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQ 634
G A+L N+ A + +R R + +D ++A +
Sbjct: 354 GFSAADLRNVCTEAGMFAIRAEREFVIDEDFMKAVR 389
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 383 (139.9 bits), Expect = 1.2e-34, P = 1.2e-34
Identities = 82/216 (37%), Positives = 124/216 (57%)
Query: 419 DMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVR 478
++++R G+ KTLLA+AVA + NF + +S V+ Y+G A +R
Sbjct: 174 ELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIR 233
Query: 479 SLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITI 538
++ A+D+ P +VF+DE+DA+G R S +E TL +LL LDGF+ G V I
Sbjct: 234 EMFNYARDHQPCIVFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVI 293
Query: 539 ASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTD 598
+TNRPD LDPAL+RPGR DRKI I P R+EILK+H+ K ++D+ AV ++D
Sbjct: 294 MATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKITKHGEIDFEAVVKLSD 353
Query: 599 GMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQ 634
G A+L N+ A + +R R + +D ++A +
Sbjct: 354 GFSAADLRNVCTEAGMFAIRAEREFVIDEDFMKAVR 389
>TIGR_CMR|CPS_1795 [details] [associations]
symbol:CPS_1795 "ATP-dependent peptidase, M41 family"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
InterPro:IPR000642 InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR013093
Pfam:PF00004 Pfam:PF01434 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0006508
GO:GO:0004222 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0017111
eggNOG:COG0542 HOGENOM:HOG000133952 ProtClustDB:CLSK741075
RefSeq:YP_268526.1 ProteinModelPortal:Q484I9 STRING:Q484I9
GeneID:3521104 KEGG:cps:CPS_1795 PATRIC:21466745
BioCyc:CPSY167879:GI48-1865-MONOMER Uniprot:Q484I9
Length = 1301
Score = 408 (148.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 125/429 (29%), Positives = 212/429 (49%)
Query: 404 GLPQYLERGVDV----KFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFS 459
GL + R +DV KF D + V+ KT LAKAVAGE G+ FFS
Sbjct: 872 GLQRAKNRLLDVIEWMKFPDKLQNFDVKIPTGFLFAGPPGTGKTFLAKAVAGECGLPFFS 931
Query: 460 ISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATL 519
+SAS+ +G + ++ +L+ A+ APS+VFIDE+DA+ +R +ER+A +
Sbjct: 932 VSASELSSTIIGGSSEKIMALFSVARKYAPSIVFIDEIDAIASQRSEDSQGNSRERNAIV 991
Query: 520 NQLLVCLDGFEGRGN-VITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVH 578
N LL +DGF + V +A+TN P +LD A++RPGRFD IF P R +
Sbjct: 992 NTLLTEMDGFSSSESPVFVMAATNYPQLLDKAILRPGRFDETIFCDLPNSEARTIFFEKF 1051
Query: 579 ARKKPMA-DDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA-AQIE 636
A+K+ + D A+ S + GM AE+ ++ A + + +T + + Q ++
Sbjct: 1052 AQKQNLQWQQSDLTALVSSSQGMSSAEIDQVLREAIYQAVGTEKP-LTIEHIKQTIVRVV 1110
Query: 637 ERGMLDRKERSSETWRQVAINEAA-MAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMD 695
+ + E R+ A +EAA + + FP+ + I+F TI PR + LG+V +
Sbjct: 1111 YGSPSENIKLGKEEKRRTAFHEAAHLLTYKLLFPN-QIIDFATIEPR-NQSLGFVATRAS 1168
Query: 696 HMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEG-QLSTIWAETADNARSAARTFVLGG 754
+++ S+ +++ + V LA R A++L ++ST + + A A + G
Sbjct: 1169 E-EYES--YSKTRVMNKLQVLLAGRVAEKLCTNNADEISTGASNDIEKATQLAMHAIYDG 1225
Query: 755 LSDKHFGLSNFWVADRINEIDT-----EALRILNLCYERAKE-ILQRNRNLLDAVVNELV 808
++ G N + + E + +A++ + E++ E +L N + L+ V N L+
Sbjct: 1226 GIEESVGPVNVGILTKFEESELLAKAQKAVQQWLITAEQSVEKLLNDNCHQLELVANTLL 1285
Query: 809 EKKSLTKQE 817
EK+SL E
Sbjct: 1286 EKESLLSDE 1294
>ASPGD|ASPL0000010049 [details] [associations]
symbol:AN4236 species:162425 "Emericella nidulans"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001302 GO:GO:0030163
GO:GO:0017111 EMBL:AACD01000068 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP OrthoDB:EOG40VZZ2
RefSeq:XP_661840.1 ProteinModelPortal:Q5B5E4 STRING:Q5B5E4
EnsemblFungi:CADANIAT00004422 GeneID:2873654 KEGG:ani:AN4236.2
Uniprot:Q5B5E4
Length = 465
Score = 380 (138.8 bits), Expect = 2.6e-34, P = 2.6e-34
Identities = 86/241 (35%), Positives = 138/241 (57%)
Query: 404 GLPQYLERGVD-----VKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFF 458
GL + +E V+ +K ++ +++ G++ KTLLA+A A E F
Sbjct: 215 GLDKQIEEIVEAIVWPMKEAERFKKLGIKAPKGALMYGPPGTGKTLLARACAAETNATFL 274
Query: 459 SISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDAT 518
++ Q V++++G GA VR + AK+ APS++FIDELDAVG +R + SG +E T
Sbjct: 275 KLAGPQLVQMFIGDGAKLVRDCFALAKEKAPSIIFIDELDAVGTKRFDSEKSGDREVQRT 334
Query: 519 LNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVH 578
+ +LL LDGF + +A+TNR D+LDPAL+R GR DRKI P P R IL++H
Sbjct: 335 MLELLNQLDGFASDDRIKVLAATNRVDVLDPALLRSGRLDRKIEFPLPNEEARANILQIH 394
Query: 579 ARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA-AQIEE 637
+RK + D V++ +A TD GA+L + A + +R G ++I ++ + A A+++
Sbjct: 395 SRKMTVEDSVNWAELARSTDEFGGAQLKAVCVEAGMIALRKGHSKIGHENYVDAIAEVQA 454
Query: 638 R 638
+
Sbjct: 455 K 455
>GENEDB_PFALCIPARUM|PF11_0314 [details] [associations]
symbol:PF11_0314 "26S protease subunit
regulatory subunit 6a, putative" species:5833 "Plasmodium
falciparum" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
EMBL:AE014186 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 380 (138.8 bits), Expect = 2.6e-34, P = 2.6e-34
Identities = 81/190 (42%), Positives = 117/190 (61%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+A A + F ++ Q V++++G GA VR + AK+ AP+++FIDELDA+G
Sbjct: 233 KTLLARACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIG 292
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R + SG +E T+ +LL LDGF V IA+TNRPD LDPAL+R GR DRKI
Sbjct: 293 TKRFDSELSGDREVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDRKI 352
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
+P P R IL++H+RK + DV++ +A TD GA+L + A + +R G
Sbjct: 353 ELPHPNEESRARILQIHSRKMNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIALRRGA 412
Query: 622 TEITTDDLLQ 631
TEI +D ++
Sbjct: 413 TEIDHEDFVE 422
>UNIPROTKB|Q8II60 [details] [associations]
symbol:PF11_0314 "26S protease subunit regulatory subunit
6a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 EMBL:AE014186
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 380 (138.8 bits), Expect = 2.6e-34, P = 2.6e-34
Identities = 81/190 (42%), Positives = 117/190 (61%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+A A + F ++ Q V++++G GA VR + AK+ AP+++FIDELDA+G
Sbjct: 233 KTLLARACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIG 292
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R + SG +E T+ +LL LDGF V IA+TNRPD LDPAL+R GR DRKI
Sbjct: 293 TKRFDSELSGDREVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDRKI 352
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
+P P R IL++H+RK + DV++ +A TD GA+L + A + +R G
Sbjct: 353 ELPHPNEESRARILQIHSRKMNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIALRRGA 412
Query: 622 TEITTDDLLQ 631
TEI +D ++
Sbjct: 413 TEIDHEDFVE 422
>UNIPROTKB|F1NDQ1 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00819977
Ensembl:ENSGALT00000013163 Uniprot:F1NDQ1
Length = 385
Score = 379 (138.5 bits), Expect = 3.3e-34, P = 3.3e-34
Identities = 80/190 (42%), Positives = 118/190 (62%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+A A + F ++ Q V++++G GA VR + AK+ APS++FIDELDA+G
Sbjct: 179 KTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIG 238
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R + +G +E T+ +LL LDGF+ V IA+TNR DILDPAL+R GR DRKI
Sbjct: 239 TKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKI 298
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
P P R I+++H+RK ++ DV+Y +A TD GA+ + A + +R G
Sbjct: 299 EFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGA 358
Query: 622 TEITTDDLLQ 631
TE+T +D ++
Sbjct: 359 TELTHEDYME 368
>UNIPROTKB|F1P3L9 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242 OMA:GALMYGP
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00601469
Ensembl:ENSGALT00000038503 Uniprot:F1P3L9
Length = 389
Score = 379 (138.5 bits), Expect = 3.3e-34, P = 3.3e-34
Identities = 80/190 (42%), Positives = 118/190 (62%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+A A + F ++ Q V++++G GA VR + AK+ APS++FIDELDA+G
Sbjct: 183 KTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIG 242
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R + +G +E T+ +LL LDGF+ V IA+TNR DILDPAL+R GR DRKI
Sbjct: 243 TKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKI 302
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
P P R I+++H+RK ++ DV+Y +A TD GA+ + A + +R G
Sbjct: 303 EFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGA 362
Query: 622 TEITTDDLLQ 631
TE+T +D ++
Sbjct: 363 TELTHEDYME 372
>UNIPROTKB|F1MWE0 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:DAAA02041602 IPI:IPI00701790
UniGene:Bt.49089 Ensembl:ENSBTAT00000028983 NextBio:20868523
Uniprot:F1MWE0
Length = 456
Score = 379 (138.5 bits), Expect = 3.3e-34, P = 3.3e-34
Identities = 80/190 (42%), Positives = 118/190 (62%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+A A + F ++ Q V++++G GA VR + AK+ APS++FIDELDA+G
Sbjct: 250 KTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIG 309
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R + +G +E T+ +LL LDGF+ V IA+TNR DILDPAL+R GR DRKI
Sbjct: 310 TKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKI 369
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
P P R I+++H+RK ++ DV+Y +A TD GA+ + A + +R G
Sbjct: 370 EFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGA 429
Query: 622 TEITTDDLLQ 631
TE+T +D ++
Sbjct: 430 TELTHEDYME 439
>UNIPROTKB|F1PBK7 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:AAEX03011486
Ensembl:ENSCAFT00000013842 Uniprot:F1PBK7
Length = 439
Score = 379 (138.5 bits), Expect = 3.3e-34, P = 3.3e-34
Identities = 80/190 (42%), Positives = 118/190 (62%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+A A + F ++ Q V++++G GA VR + AK+ APS++FIDELDA+G
Sbjct: 233 KTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIG 292
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R + +G +E T+ +LL LDGF+ V IA+TNR DILDPAL+R GR DRKI
Sbjct: 293 TKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKI 352
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
P P R I+++H+RK ++ DV+Y +A TD GA+ + A + +R G
Sbjct: 353 EFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGA 412
Query: 622 TEITTDDLLQ 631
TE+T +D ++
Sbjct: 413 TELTHEDYME 422
>UNIPROTKB|E9PM69 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AC090559 TIGRFAMs:TIGR01242 HGNC:HGNC:9549
ChiTaRS:PSMC3 IPI:IPI00979423 ProteinModelPortal:E9PM69 SMR:E9PM69
PRIDE:E9PM69 Ensembl:ENST00000530912 ArrayExpress:E9PM69
Bgee:E9PM69 Uniprot:E9PM69
Length = 397
Score = 379 (138.5 bits), Expect = 3.3e-34, P = 3.3e-34
Identities = 80/190 (42%), Positives = 118/190 (62%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+A A + F ++ Q V++++G GA VR + AK+ APS++FIDELDA+G
Sbjct: 191 KTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIG 250
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R + +G +E T+ +LL LDGF+ V IA+TNR DILDPAL+R GR DRKI
Sbjct: 251 TKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKI 310
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
P P R I+++H+RK ++ DV+Y +A TD GA+ + A + +R G
Sbjct: 311 EFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGA 370
Query: 622 TEITTDDLLQ 631
TE+T +D ++
Sbjct: 371 TELTHEDYME 380
>UNIPROTKB|P17980 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0001824
"blastocyst development" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0003714
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
EMBL:CH471064 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 GO:GO:0003713 GO:GO:0051436
GO:GO:0017111 GO:GO:0000932 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
GO:GO:0001824 Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 OMA:GALMYGP
EMBL:AK313518 EMBL:BC008713 EMBL:BC073165 EMBL:BC106920
EMBL:BC107804 EMBL:AK222485 EMBL:M34079 EMBL:CR456731
IPI:IPI00018398 PIR:A34832 RefSeq:NP_002795.2 UniGene:Hs.250758
ProteinModelPortal:P17980 SMR:P17980 DIP:DIP-27555N IntAct:P17980
MINT:MINT-1149785 STRING:P17980 PhosphoSite:P17980 DMDM:20532406
REPRODUCTION-2DPAGE:IPI00018398 PaxDb:P17980 PeptideAtlas:P17980
PRIDE:P17980 DNASU:5702 Ensembl:ENST00000298852 GeneID:5702
KEGG:hsa:5702 UCSC:uc001nfh.2 CTD:5702 GeneCards:GC11M047440
HGNC:HGNC:9549 HPA:HPA006065 MIM:186852 neXtProt:NX_P17980
PharmGKB:PA33894 InParanoid:P17980 OrthoDB:EOG46143Z
PhylomeDB:P17980 ChiTaRS:PSMC3 GenomeRNAi:5702 NextBio:22154
PMAP-CutDB:P17980 ArrayExpress:P17980 Bgee:P17980 CleanEx:HS_PSMC3
Genevestigator:P17980 GermOnline:ENSG00000165916 Uniprot:P17980
Length = 439
Score = 379 (138.5 bits), Expect = 3.3e-34, P = 3.3e-34
Identities = 80/190 (42%), Positives = 118/190 (62%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+A A + F ++ Q V++++G GA VR + AK+ APS++FIDELDA+G
Sbjct: 233 KTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIG 292
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R + +G +E T+ +LL LDGF+ V IA+TNR DILDPAL+R GR DRKI
Sbjct: 293 TKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKI 352
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
P P R I+++H+RK ++ DV+Y +A TD GA+ + A + +R G
Sbjct: 353 EFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGA 412
Query: 622 TEITTDDLLQ 631
TE+T +D ++
Sbjct: 413 TELTHEDYME 422
>UNIPROTKB|F1SID4 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:CU856312
Ensembl:ENSSSCT00000014459 Uniprot:F1SID4
Length = 446
Score = 379 (138.5 bits), Expect = 3.3e-34, P = 3.3e-34
Identities = 80/190 (42%), Positives = 118/190 (62%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+A A + F ++ Q V++++G GA VR + AK+ APS++FIDELDA+G
Sbjct: 240 KTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIG 299
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R + +G +E T+ +LL LDGF+ V IA+TNR DILDPAL+R GR DRKI
Sbjct: 300 TKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKI 359
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
P P R I+++H+RK ++ DV+Y +A TD GA+ + A + +R G
Sbjct: 360 EFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGA 419
Query: 622 TEITTDDLLQ 631
TE+T +D ++
Sbjct: 420 TELTHEDYME 429
>MGI|MGI:1098754 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit,
ATPase 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1098754 GO:GO:0005524 GO:GO:0005634
GO:GO:0030163 GO:GO:0017111 GO:GO:0000932
GeneTree:ENSGT00560000077230 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624
CTD:5702 ChiTaRS:PSMC3 EMBL:D49686 EMBL:AB040858 EMBL:AY902337
EMBL:AL691439 EMBL:BC005783 IPI:IPI00133206 RefSeq:NP_032974.2
UniGene:Mm.289832 ProteinModelPortal:O88685 SMR:O88685
IntAct:O88685 STRING:O88685 PhosphoSite:O88685 PaxDb:O88685
PRIDE:O88685 Ensembl:ENSMUST00000067663 GeneID:19182 KEGG:mmu:19182
NextBio:295874 Bgee:O88685 Genevestigator:O88685
GermOnline:ENSMUSG00000002102 Uniprot:O88685
Length = 442
Score = 379 (138.5 bits), Expect = 3.3e-34, P = 3.3e-34
Identities = 80/190 (42%), Positives = 118/190 (62%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+A A + F ++ Q V++++G GA VR + AK+ APS++FIDELDA+G
Sbjct: 236 KTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIG 295
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R + +G +E T+ +LL LDGF+ V IA+TNR DILDPAL+R GR DRKI
Sbjct: 296 TKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKI 355
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
P P R I+++H+RK ++ DV+Y +A TD GA+ + A + +R G
Sbjct: 356 EFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGA 415
Query: 622 TEITTDDLLQ 631
TE+T +D ++
Sbjct: 416 TELTHEDYME 425
>RGD|61905 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit, ATPase
3" species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0001824 "blastocyst development"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA;ISO;ISS]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:61905 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0030163 GO:GO:0017111
GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
KO:K03065 GO:GO:0022624 CTD:5702 EMBL:D83522 EMBL:U77918
IPI:IPI00421528 RefSeq:NP_113783.1 UniGene:Rn.11173
ProteinModelPortal:Q63569 IntAct:Q63569 STRING:Q63569
PhosphoSite:Q63569 PRIDE:Q63569 GeneID:29677 KEGG:rno:29677
UCSC:RGD:61905 NextBio:610019 ArrayExpress:Q63569
Genevestigator:Q63569 GermOnline:ENSRNOG00000011414 Uniprot:Q63569
Length = 439
Score = 379 (138.5 bits), Expect = 3.3e-34, P = 3.3e-34
Identities = 80/190 (42%), Positives = 118/190 (62%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+A A + F ++ Q V++++G GA VR + AK+ APS++FIDELDA+G
Sbjct: 233 KTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIG 292
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R + +G +E T+ +LL LDGF+ V IA+TNR DILDPAL+R GR DRKI
Sbjct: 293 TKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKI 352
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
P P R I+++H+RK ++ DV+Y +A TD GA+ + A + +R G
Sbjct: 353 EFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGA 412
Query: 622 TEITTDDLLQ 631
TE+T +D ++
Sbjct: 413 TELTHEDYME 422
>UNIPROTKB|Q6P6U2 [details] [associations]
symbol:Psmc3 "26S protease regulatory subunit 6A"
species:10116 "Rattus norvegicus" [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:61905 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:CH473949
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
IPI:IPI00421528 UniGene:Rn.11173 EMBL:BC062019 SMR:Q6P6U2
IntAct:Q6P6U2 STRING:Q6P6U2 Ensembl:ENSRNOT00000015757
Genevestigator:Q6P6U2 Uniprot:Q6P6U2
Length = 442
Score = 379 (138.5 bits), Expect = 3.3e-34, P = 3.3e-34
Identities = 80/190 (42%), Positives = 118/190 (62%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+A A + F ++ Q V++++G GA VR + AK+ APS++FIDELDA+G
Sbjct: 236 KTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIG 295
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R + +G +E T+ +LL LDGF+ V IA+TNR DILDPAL+R GR DRKI
Sbjct: 296 TKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKI 355
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
P P R I+++H+RK ++ DV+Y +A TD GA+ + A + +R G
Sbjct: 356 EFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGA 415
Query: 622 TEITTDDLLQ 631
TE+T +D ++
Sbjct: 416 TELTHEDYME 425
>CGD|CAL0005257 [details] [associations]
symbol:RPT2 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045732 "positive regulation
of protein catabolic process" evidence=IEA] [GO:0043171 "peptide
catabolic process" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005257 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000051 EMBL:AACQ01000050
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03062 RefSeq:XP_717718.1
RefSeq:XP_717812.1 ProteinModelPortal:Q5A7M6 STRING:Q5A7M6
GeneID:3640525 GeneID:3640683 KEGG:cal:CaO19.12895
KEGG:cal:CaO19.5440 Uniprot:Q5A7M6
Length = 465
Score = 378 (138.1 bits), Expect = 4.3e-34, P = 4.3e-34
Identities = 84/245 (34%), Positives = 136/245 (55%)
Query: 407 QYLERGVDVKFS--DMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQ 464
Q ++ V++ + ++Y G++ KTLLAKAVA + F I S+
Sbjct: 196 QEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSE 255
Query: 465 FVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLV 524
++ Y+G G R ++Q A D+APS+VFIDE+DA+G +R G +E T+ +LL
Sbjct: 256 LIQKYLGDGPRLCRQIFQIAADHAPSIVFIDEIDAIGTKRYESTSGGEREIQRTMLELLN 315
Query: 525 CLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPM 584
LDGF+ RG++ I +TN+ + LDPAL+RPGR DRKI P + +IL +H K +
Sbjct: 316 QLDGFDDRGDIKVIMATNKIESLDPALIRPGRIDRKILFENPDANTKKKILTIHTSKMSL 375
Query: 585 ADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRK 644
ADDV+ + + D + GA++ I A + +R+ R ++ +D A +ER + ++
Sbjct: 376 ADDVNLDEIVTGKDDLSGADIKAICTEAGLLALRERRMQVKAEDFKSA---KERVLKNKV 432
Query: 645 ERSSE 649
E + E
Sbjct: 433 EENLE 437
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 378 (138.1 bits), Expect = 4.3e-34, P = 4.3e-34
Identities = 84/232 (36%), Positives = 132/232 (56%)
Query: 403 KGLPQYLERGVDVKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISA 462
K + + +E + VK +++ G+ KTLLA+AVA F +S
Sbjct: 169 KEIKEVIE--LPVKHPELFDALGIAQPKGVLLFGPPGTGKTLLARAVAHHTECTFIRVSG 226
Query: 463 SQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDA--TLN 520
S+ V+ ++G GA VR L+ A+++APS++F+DE+D++G R ++GS G + + T+
Sbjct: 227 SELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR--VEGSSGGDSEVQRTML 284
Query: 521 QLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHAR 580
+LL LDGFE N+ I +TNR DILDPAL+RPGR DRKI P P R +ILK+H+R
Sbjct: 285 ELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPAPDEKARADILKIHSR 344
Query: 581 KKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA 632
K + ++ +A G GAE+ ++ A + +R+ R +T +D A
Sbjct: 345 KMNLMRGINMAKIAEQIPGASGAEVKSVCTEAGMFALRERRIHVTQEDFEMA 396
>RGD|727940 [details] [associations]
symbol:Spg7 "spastic paraplegia 7 homolog (human)" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA;ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA;ISO] [GO:0008089
"anterograde axon cargo transport" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0031966
"mitochondrial membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 SMART:SM00382 RGD:727940
GO:GO:0016021 GO:GO:0005524 GO:GO:0031966 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 GO:GO:0017111 HSSP:Q9WZ49 MEROPS:M41.006
CTD:6687 KO:K09552 EMBL:AY278739 IPI:IPI00327108 RefSeq:NP_852053.1
UniGene:Rn.16437 ProteinModelPortal:Q7TT47 SMR:Q7TT47 STRING:Q7TT47
PRIDE:Q7TT47 Ensembl:ENSRNOT00000047754 GeneID:353231
KEGG:rno:353231 UCSC:RGD:727940 NextBio:672619 ArrayExpress:Q7TT47
Genevestigator:Q7TT47 Uniprot:Q7TT47
Length = 744
Score = 359 (131.4 bits), Expect = 5.3e-34, Sum P(2) = 5.3e-34
Identities = 78/164 (47%), Positives = 108/164 (65%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKAVA EA V F +++ +FVE+ G+GA+RVRSL++EA+ AP +V+IDE+DAVG
Sbjct: 355 KTLLAKAVATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVG 414
Query: 502 RERGL-IKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRK 560
++R + G E + TLNQLLV +DG +VI +ASTNR D+LD AL+RPGR DR
Sbjct: 415 KKRSTSMSGFSNTEEEQTLNQLLVEMDGMGTADHVIVLASTNRADVLDNALMRPGRLDRH 474
Query: 561 IFIPKPGLIGRMEILKVHARKKPMADDVDYLA--VASMTDGMVG 602
+FI P L R EI + H + + + + +A +T G G
Sbjct: 475 VFIDLPTLQERREIFEQHLKGLKLTQPSSFYSQRLAELTPGFSG 518
Score = 88 (36.0 bits), Expect = 5.3e-34, Sum P(2) = 5.3e-34
Identities = 48/222 (21%), Positives = 97/222 (43%)
Query: 647 SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSR 706
S E R VA +E+ A+V + + V+IAPR LG+ +M + + + ++
Sbjct: 527 SKEEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFSQM----LPRDQYLFTK 582
Query: 707 QSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAAR---TFV--------LGGL 755
+ L + + + L RAA+ + S + + D+ R R + V +G +
Sbjct: 583 EQLFERMCMALGGRAAEAI-----SFSRVTSGAQDDLRKVTRIAYSMVKQFGMAPSIGPV 637
Query: 756 S-----DKHFGLSNFWVADRINEI-DTEALRILNLCYERAKEILQRNRNLLDAVVNELVE 809
S + G+ + + ++ D EA ++ Y +++L N + L A+ N L+E
Sbjct: 638 SFPEAQEGLVGIGRRPFSQGLQQMMDHEARLLVARAYRHTEKVLLDNLDKLQALANALLE 697
Query: 810 KKSLTKQEFFHLV--ELHGSLEPMPPSI-VDIRAAKHSEIQE 848
K+ + ++ L+ HG + + P +D K + +E
Sbjct: 698 KEVINYEDIEALIGPPPHGPKKMIAPQKWIDAEKEKQASGEE 739
>UNIPROTKB|Q7TT47 [details] [associations]
symbol:Spg7 "Paraplegin" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 RGD:727940 GO:GO:0016021 GO:GO:0005524
GO:GO:0031966 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 eggNOG:COG0465 GeneTree:ENSGT00530000063070
HOGENOM:HOG000217277 HOVERGEN:HBG050184 GO:GO:0017111 HSSP:Q9WZ49
MEROPS:M41.006 CTD:6687 KO:K09552 EMBL:AY278739 IPI:IPI00327108
RefSeq:NP_852053.1 UniGene:Rn.16437 ProteinModelPortal:Q7TT47
SMR:Q7TT47 STRING:Q7TT47 PRIDE:Q7TT47 Ensembl:ENSRNOT00000047754
GeneID:353231 KEGG:rno:353231 UCSC:RGD:727940 NextBio:672619
ArrayExpress:Q7TT47 Genevestigator:Q7TT47 Uniprot:Q7TT47
Length = 744
Score = 359 (131.4 bits), Expect = 5.3e-34, Sum P(2) = 5.3e-34
Identities = 78/164 (47%), Positives = 108/164 (65%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKAVA EA V F +++ +FVE+ G+GA+RVRSL++EA+ AP +V+IDE+DAVG
Sbjct: 355 KTLLAKAVATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVG 414
Query: 502 RERGL-IKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRK 560
++R + G E + TLNQLLV +DG +VI +ASTNR D+LD AL+RPGR DR
Sbjct: 415 KKRSTSMSGFSNTEEEQTLNQLLVEMDGMGTADHVIVLASTNRADVLDNALMRPGRLDRH 474
Query: 561 IFIPKPGLIGRMEILKVHARKKPMADDVDYLA--VASMTDGMVG 602
+FI P L R EI + H + + + + +A +T G G
Sbjct: 475 VFIDLPTLQERREIFEQHLKGLKLTQPSSFYSQRLAELTPGFSG 518
Score = 88 (36.0 bits), Expect = 5.3e-34, Sum P(2) = 5.3e-34
Identities = 48/222 (21%), Positives = 97/222 (43%)
Query: 647 SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSR 706
S E R VA +E+ A+V + + V+IAPR LG+ +M + + + ++
Sbjct: 527 SKEEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFSQM----LPRDQYLFTK 582
Query: 707 QSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAAR---TFV--------LGGL 755
+ L + + + L RAA+ + S + + D+ R R + V +G +
Sbjct: 583 EQLFERMCMALGGRAAEAI-----SFSRVTSGAQDDLRKVTRIAYSMVKQFGMAPSIGPV 637
Query: 756 S-----DKHFGLSNFWVADRINEI-DTEALRILNLCYERAKEILQRNRNLLDAVVNELVE 809
S + G+ + + ++ D EA ++ Y +++L N + L A+ N L+E
Sbjct: 638 SFPEAQEGLVGIGRRPFSQGLQQMMDHEARLLVARAYRHTEKVLLDNLDKLQALANALLE 697
Query: 810 KKSLTKQEFFHLV--ELHGSLEPMPPSI-VDIRAAKHSEIQE 848
K+ + ++ L+ HG + + P +D K + +E
Sbjct: 698 KEVINYEDIEALIGPPPHGPKKMIAPQKWIDAEKEKQASGEE 739
>UNIPROTKB|H9KYT1 [details] [associations]
symbol:LOC430766 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
PANTHER:PTHR23077:SF18 GeneTree:ENSGT00700000104534
EMBL:AADN02071262 Ensembl:ENSGALT00000000527 OMA:NRRTHAK
Uniprot:H9KYT1
Length = 538
Score = 387 (141.3 bits), Expect = 5.8e-34, P = 5.8e-34
Identities = 84/201 (41%), Positives = 121/201 (60%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKA+A E NF SI + + ++ G + VR ++ +A+ AP V+F DELD++
Sbjct: 256 KTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIA 315
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+ RG G GG D +NQ+L +DG + NV I +TNRPDI+DPA++RPGR D+ I
Sbjct: 316 KARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLI 375
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG- 620
+IP P R+ ILK + RK P+A DVD +A MT+G GA+L I + A +R+
Sbjct: 376 YIPLPDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESI 435
Query: 621 RTEITTDDLLQ----AAQIEE 637
+EI + Q A ++EE
Sbjct: 436 ESEIRRERERQTNPSAMEVEE 456
Score = 329 (120.9 bits), Expect = 8.0e-27, P = 8.0e-27
Identities = 92/255 (36%), Positives = 141/255 (55%)
Query: 461 SASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLN 520
S + + G S +R ++EA+ NAP+++FIDELDA+ +R K G ER ++
Sbjct: 2 SGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKRE--KTHGEVER-RIVS 58
Query: 521 QLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHAR 580
QLL +DG + R +VI +A+TNRP+ +DPAL R GRFDR++ I P GR+EIL++H +
Sbjct: 59 QLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTK 118
Query: 581 KKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEER-- 638
+ADDVD V + T G VGA+LA + AA+ +R I +D A++
Sbjct: 119 NMKLADDVDLEQVGNETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLA 178
Query: 639 -GMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHM 697
M D + S++ A+ E + V V + D+ +E V R +EL V+ ++H
Sbjct: 179 VTMDDFRWALSQS-NPSALRETVVEVPQVTWEDIGGLEDVK---RELQEL--VQYPVEHP 232
Query: 698 -KF-KEGMLSRQSLL 710
KF K GM + +L
Sbjct: 233 DKFLKFGMTPSKGVL 247
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 399 (145.5 bits), Expect = 6.5e-34, P = 6.5e-34
Identities = 88/236 (37%), Positives = 142/236 (60%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTL+A+AVA E G FF I+ + + G S +R ++EA+ NAP+++FIDE+D++
Sbjct: 261 KTLMARAVANETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIA 320
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R K +G ER ++QLL +DG + R NV+ IA+TNRP+ +DPAL R GRFDR++
Sbjct: 321 PKRD--KTNGEVER-RVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREV 377
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
I P GR+E+L++H + +ADDVD A+A+ T G VGA++A++ AA+ +R+
Sbjct: 378 DIGIPDATGRLEVLRIHTKNMKLADDVDLEALAAETHGYVGADIASLCSEAAMQQIREKM 437
Query: 622 TEITTD-DLLQAAQIEERGM-LDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIE 675
I D D + A ++ G+ +D + A+ E + V V + D+ ++
Sbjct: 438 DLIDLDEDEIDAEVLDSLGVTMDNFRFALGNSNPSALRETVVESVNVTWDDVGGLD 493
Score = 376 (137.4 bits), Expect = 2.3e-31, P = 2.3e-31
Identities = 77/201 (38%), Positives = 113/201 (56%)
Query: 419 DMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVR 478
D Y + G+ KTLLAKAVA E NF S+ + + ++ G S +R
Sbjct: 511 DQYTKFGLSPSKGVLFYGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIR 570
Query: 479 SLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITI 538
++ +A+ AP+VVF+DELD++ + RG G G D +NQLL +DG + NV I
Sbjct: 571 DIFDKARAAAPTVVFLDELDSIAKARGGSLGDAGGASDRVVNQLLTEMDGMNAKKNVFVI 630
Query: 539 ASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTD 598
+TNRPD +DPA++RPGR D+ I++P P R+ IL RK P+ ++ A+A T
Sbjct: 631 GATNRPDQIDPAILRPGRLDQLIYVPLPDENARLSILNAQLRKTPLEPGLELTAIAKATQ 690
Query: 599 GMVGAELANIVEVAAINMMRD 619
G GA+L IV+ AA ++D
Sbjct: 691 GFSGADLLYIVQRAAKYAIKD 711
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 376 (137.4 bits), Expect = 7.0e-34, P = 7.0e-34
Identities = 82/213 (38%), Positives = 127/213 (59%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+AVA F +S S+ V+ ++G GA VR L+ A+++APS++F+DE+D++G
Sbjct: 191 KTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIG 250
Query: 502 RERGLIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRK 560
L GSGG E T+ +LL LDGFE N+ I +TNR DILD AL+RPGR DRK
Sbjct: 251 SR--LEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRK 308
Query: 561 IFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG 620
I P P R++ILK+H+RK + ++ +A + G GAE+ + A + +R+
Sbjct: 309 IEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRER 368
Query: 621 RTEITTDDLLQA-AQIEERGMLDRKERSSETWR 652
R +T +D A A++ ++ ++ + W+
Sbjct: 369 RVHVTQEDFEMAVAKVMQKDS-EKNMSIKKLWK 400
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 376 (137.4 bits), Expect = 7.0e-34, P = 7.0e-34
Identities = 79/204 (38%), Positives = 121/204 (59%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+AVA + NF + +S V+ Y+G A +R ++ A+D+ P ++F+DE+DA+G
Sbjct: 180 KTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIG 239
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
R S +E TL +LL +DGF+ V I +TNRPD LDPAL+RPGR DRKI
Sbjct: 240 GRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKI 299
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
I P R++ILK+H+ D+DY A+ ++DG GA+L N+ A + +R
Sbjct: 300 HIELPNEQARLDILKIHSGPITKHGDIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADH 359
Query: 622 TEITTDDLLQAAQ-IEERGMLDRK 644
+T +D ++A + + + L+ K
Sbjct: 360 EYVTQEDFMKAVRKVADSKKLESK 383
>CGD|CAL0002261 [details] [associations]
symbol:RPT5 species:5476 "Candida albicans" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0002261 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000086 EMBL:AACQ01000085 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 RefSeq:XP_715432.1 RefSeq:XP_715502.1
ProteinModelPortal:Q5A0X3 STRING:Q5A0X3 GeneID:3642858
GeneID:3642911 KEGG:cal:CaO19.10635 KEGG:cal:CaO19.3123
Uniprot:Q5A0X3
Length = 454
Score = 375 (137.1 bits), Expect = 9.0e-34, P = 9.0e-34
Identities = 87/239 (36%), Positives = 139/239 (58%)
Query: 403 KGLPQYLERGV-DVKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSIS 461
K + + +E V +K +D ++ G++ KTLLA+A A ++G F ++
Sbjct: 207 KQIEELIEAVVLPMKQADKFKNLGIKPPKGALMYGPPGTGKTLLARACAAQSGATFLKLA 266
Query: 462 ASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQ 521
A Q V++++G GA VR + AK+ AP+++FIDELDA+G +R SG +E T+ +
Sbjct: 267 APQLVQMFIGDGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSDKSGDREVQRTMLE 326
Query: 522 LLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARK 581
LL LDGF V +A+TNR D LDPAL+R GR DRKI P P R +LK+HARK
Sbjct: 327 LLNQLDGFGSDDRVKVLAATNRVDTLDPALLRSGRLDRKIEFPLPSEEARESVLKIHARK 386
Query: 582 KPMADD-VDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA-AQIEER 638
++ V++ +A TD GA+L + A + +R+G++ I +D ++A ++++ R
Sbjct: 387 LHCDNNSVNWRELARSTDEFNGAQLKAVTVEAGMIALRNGKSIIKHEDFVEAISEVQAR 445
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 374 (136.7 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 82/236 (34%), Positives = 135/236 (57%)
Query: 403 KGLPQYLERGVDVKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISA 462
K + + +E + VK +++ G+ KTLLA+AVA F +S
Sbjct: 154 KEIKEVIE--LPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTECKFIRVSG 211
Query: 463 SQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDA--TLN 520
S+ V+ Y+G G+ VR L+ A+++APS++F+DE+D++G R ++GS G + + T+
Sbjct: 212 SELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSR--VEGSSGGDSEVQRTML 269
Query: 521 QLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHAR 580
+LL LDGFE ++ I +TNR DILDPAL+RPGR DRKI P P + R +ILK+H+R
Sbjct: 270 ELLNQLDGFESSKDIKIIMATNRLDILDPALLRPGRIDRKIEFPAPTVAARTDILKIHSR 329
Query: 581 KKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDL-LQAAQI 635
+ ++ +A +G GA++ + A + +R+ R +T +D L A++
Sbjct: 330 SMNLTRGINLRKIAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQEDFELAVAKV 385
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 373 (136.4 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 84/240 (35%), Positives = 133/240 (55%)
Query: 415 VKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGA 474
VK +++ G+ KTLLA+AVA F +S S+ V+ ++G G+
Sbjct: 163 VKHPELFDALGITQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGS 222
Query: 475 SRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGN 534
VR L+ A+++APS++F+DE+D++G R L G+G E T+ +LL LDGFE N
Sbjct: 223 RMVRELFVMAREHAPSIIFMDEIDSIGSAR-LETGTGDSEVQRTMLELLNQLDGFEATKN 281
Query: 535 VITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVA 594
+ I +TNR D+LD AL+RPGR DRKI P P R++ILK+H+RK + ++ +A
Sbjct: 282 IKVIMATNRIDVLDQALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIA 341
Query: 595 SMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSS--ETWR 652
G GAE+ + A + +R+ R +T +D A + + M D ++ S + W+
Sbjct: 342 EEMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMA--VSKVMMKDSEKNMSIRKFWK 399
>POMBASE|SPAC3A11.12c [details] [associations]
symbol:rpt5 "19S proteasome regulatory subunit Rpt5
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPAC3A11.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 GO:GO:0008540
OMA:GALMYGP EMBL:AB012136 PIR:T11634 RefSeq:XP_001713083.1
ProteinModelPortal:O14126 STRING:O14126 PRIDE:O14126
EnsemblFungi:SPAC3A11.12c.1 GeneID:3361462 KEGG:spo:SPAC3A11.12c
OrthoDB:EOG40VZZ2 NextBio:20811506 Uniprot:O14126
Length = 438
Score = 373 (136.4 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 86/238 (36%), Positives = 136/238 (57%)
Query: 418 SDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRV 477
+D +R+ GV+ KTLLA+A A ++ F ++A Q V++++G GA V
Sbjct: 208 ADKFRKLGVKPPKGCLMFGPPGTGKTLLARACAAQSNATFLKLAAPQLVQMFIGDGAKLV 267
Query: 478 RSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVIT 537
R + AK+ +P+++FIDELDA+G +R + +G +E T+ +LL LDGF V
Sbjct: 268 RDAFALAKEKSPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSDDRVKV 327
Query: 538 IASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMT 597
IA+TNR D LDPAL+R GR DRK+ P P R+ IL++H+RK + DD+++ +A T
Sbjct: 328 IAATNRVDTLDPALLRSGRLDRKLEFPLPNEEARVGILRIHSRKMAIDDDINWEELARST 387
Query: 598 DGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQVA 655
D GA L ++ A + +R G T+I + + G+L+ + R S+T + A
Sbjct: 388 DEYNGAMLKSVCVEAGMIALRQGDTKINHEHFMD-------GILEVQMRKSKTLQYFA 438
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 372 (136.0 bits), Expect = 1.9e-33, P = 1.9e-33
Identities = 84/245 (34%), Positives = 136/245 (55%)
Query: 407 QYLERGVDVKFS--DMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQ 464
Q ++ V++ + + Y G++ KTLLAKAVA + F + S+
Sbjct: 194 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 253
Query: 465 FVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLV 524
++ Y+G G VR L++ A+++APS+VFIDE+DAVG +R G +E T+ +LL
Sbjct: 254 LIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLN 313
Query: 525 CLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPM 584
LDGF+ RG+V I +TNR + LDPAL+RPGR DRKI P P + I +H + +
Sbjct: 314 QLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTL 373
Query: 585 ADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRK 644
A+DV+ + D + GA++ I A + +R+ R ++T +D ++ +E + +K
Sbjct: 374 AEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKS---KESVLYRKK 430
Query: 645 ERSSE 649
E + E
Sbjct: 431 EGTPE 435
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 372 (136.0 bits), Expect = 1.9e-33, P = 1.9e-33
Identities = 82/231 (35%), Positives = 127/231 (54%)
Query: 403 KGLPQYLERGVDVKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISA 462
K + + +E + +K +++ G+ KTLLA+AVA F +S
Sbjct: 171 KEIKEVIE--LPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG 228
Query: 463 SQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLI-KGSGGQERDATLNQ 521
S+ V+ Y+G G+ VR L+ A+++APS++F+DE+D++G R G+G E T+ +
Sbjct: 229 SELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLE 288
Query: 522 LLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARK 581
LL LDGFE + + +TNR DILD AL+RPGR DRKI P P R +ILK+H+RK
Sbjct: 289 LLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRK 348
Query: 582 KPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA 632
+ +D +A +G GAEL + A + +R+ R +T +D A
Sbjct: 349 MNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMA 399
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 372 (136.0 bits), Expect = 1.9e-33, P = 1.9e-33
Identities = 82/231 (35%), Positives = 127/231 (54%)
Query: 403 KGLPQYLERGVDVKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISA 462
K + + +E + +K +++ G+ KTLLA+AVA F +S
Sbjct: 171 KEIKEVIE--LPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG 228
Query: 463 SQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLI-KGSGGQERDATLNQ 521
S+ V+ Y+G G+ VR L+ A+++APS++F+DE+D++G R G+G E T+ +
Sbjct: 229 SELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLE 288
Query: 522 LLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARK 581
LL LDGFE + + +TNR DILD AL+RPGR DRKI P P R +ILK+H+RK
Sbjct: 289 LLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRK 348
Query: 582 KPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA 632
+ +D +A +G GAEL + A + +R+ R +T +D A
Sbjct: 349 MNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMA 399
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 394 (143.8 bits), Expect = 2.2e-33, P = 2.2e-33
Identities = 87/238 (36%), Positives = 143/238 (60%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTL+A+AVA E G FF I+ + + G S +R ++EA+ N+P+++FIDE+D++
Sbjct: 271 KTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIA 330
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R K +G ER ++QLL +DG + R NV+ +A+TNRP+ +DPAL R GRFDR++
Sbjct: 331 PKRE--KTNGEVER-RVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREV 387
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
+ P GR+EIL++H + +ADDVD +A+ T G VG++LA++ AA+ +R+
Sbjct: 388 DVGIPDPTGRLEILRIHTKNMKLADDVDLEQIAAETHGYVGSDLASLCSEAAMQQIREKM 447
Query: 622 TEITTD-DLLQAAQIEERGM-LDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEFV 677
I D D + A ++ G+ +D + + A+ E + V V + D+ +E V
Sbjct: 448 DMIDLDEDEIDAEVLDSLGVTMDNFRFALGSSNPSALRETVVEVPNVRWEDIGGLEEV 505
Score = 386 (140.9 bits), Expect = 1.7e-32, P = 1.7e-32
Identities = 93/263 (35%), Positives = 141/263 (53%)
Query: 415 VKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGA 474
V +++ + R GV KTLLAKA+A E NF S+ + + ++ G
Sbjct: 517 VMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIANECSANFISVKGPELLSMWFGESE 576
Query: 475 SRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKG-SGGQERDATLNQLLVCLDGFEGRG 533
S VR ++ +A+ AP VVF+DELD++ + RG G SGG +R +NQLL +DG +
Sbjct: 577 SNVRDIFDKARAAAPCVVFLDELDSIAKARGASAGDSGGGDR--VVNQLLTEMDGVNSKK 634
Query: 534 NVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAV 593
NV I +TNRPD +DPAL+RPGR D+ I++P P R IL+ R P+A+DVD AV
Sbjct: 635 NVFVIGATNRPDQIDPALMRPGRLDQLIYVPLPDEEARFSILQTQLRHTPVAEDVDLRAV 694
Query: 594 ASMTDGMVGAELANIVEVAAINMMRDGRTE-ITTDDLLQAAQIEERGMLDRKERSSETWR 652
A T G GA+L +V+ A ++D E I ++ A ++ ++D S+ R
Sbjct: 695 AKATHGFSGADLEFVVQRAVKLAIKDSIEEDIKRENETGEAPADDV-VMDEDASVSQVQR 753
Query: 653 QVAINEAAMAVVAVNFPDLKNIE 675
MA +V+ +++ E
Sbjct: 754 HHVEEAMKMARRSVSDAEVRRYE 776
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 371 (135.7 bits), Expect = 2.5e-33, P = 2.5e-33
Identities = 80/230 (34%), Positives = 129/230 (56%)
Query: 407 QYLERGVDVKFS--DMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQ 464
Q ++ V++ + + Y G++ KTLLAKAVA + F + S+
Sbjct: 194 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 253
Query: 465 FVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLV 524
++ Y+G G VR L++ A+++APS+VFIDE+DA+G +R G +E T+ +LL
Sbjct: 254 LIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLN 313
Query: 525 CLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPM 584
LDGF+ RG+V I +TNR + LDPAL+RPGR DRKI P P + I ++H + +
Sbjct: 314 QLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTL 373
Query: 585 ADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQ 634
ADDV + D + GA++ I A + +R+ R ++T +D ++ +
Sbjct: 374 ADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKE 423
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 371 (135.7 bits), Expect = 2.5e-33, P = 2.5e-33
Identities = 80/230 (34%), Positives = 129/230 (56%)
Query: 407 QYLERGVDVKFS--DMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQ 464
Q ++ V++ + + Y G++ KTLLAKAVA + F + S+
Sbjct: 193 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 252
Query: 465 FVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLV 524
++ Y+G G VR L++ A+++APS+VFIDE+DA+G +R G +E T+ +LL
Sbjct: 253 LIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLN 312
Query: 525 CLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPM 584
LDGF+ RG+V I +TNR + LDPAL+RPGR DRKI P P + I ++H + +
Sbjct: 313 QLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTL 372
Query: 585 ADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQ 634
ADDV + D + GA++ I A + +R+ R ++T +D ++ +
Sbjct: 373 ADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKE 422
>TAIR|locus:2061639 [details] [associations]
symbol:RPT2b "regulatory particle AAA-ATPase 2b"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007292
"female gamete generation" evidence=IGI] [GO:0010078 "maintenance
of root meristem identity" evidence=IMP] [GO:0048232 "male gamete
generation" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC006081 GO:GO:0007292
GO:GO:0010078 HSSP:P43773 GO:GO:0048232 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 UniGene:At.24596 KO:K03062
ProtClustDB:CLSN2683303 EMBL:AF372977 EMBL:AY035072 EMBL:AY056335
EMBL:AY087584 IPI:IPI00521093 PIR:E84585 RefSeq:NP_179604.1
UniGene:At.13496 ProteinModelPortal:Q9SL67 SMR:Q9SL67 IntAct:Q9SL67
STRING:Q9SL67 PaxDb:Q9SL67 PRIDE:Q9SL67 EnsemblPlants:AT2G20140.1
GeneID:816533 KEGG:ath:AT2G20140 GeneFarm:1495 TAIR:At2g20140
InParanoid:Q9SL67 OMA:FIRNQER PhylomeDB:Q9SL67 Uniprot:Q9SL67
Length = 443
Score = 371 (135.7 bits), Expect = 2.5e-33, P = 2.5e-33
Identities = 87/241 (36%), Positives = 132/241 (54%)
Query: 407 QYLERGVDVKFS--DMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQ 464
Q ++ V++ + ++Y G++ KTLLAKAVA F + S+
Sbjct: 198 QEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSE 257
Query: 465 FVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLV 524
++ Y+G G VR L++ A D +PS+VFIDE+DAVG +R G +E T+ +LL
Sbjct: 258 LIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDANSGGEREIQRTMLELLN 317
Query: 525 CLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPM 584
LDGF+ RG+V I +TNR + LDPAL+RPGR DRKI P P + R I ++H K +
Sbjct: 318 QLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTL 377
Query: 585 ADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRK 644
A+DV+ D GA++ I A + +R+ R ++T D +A +E+ M +K
Sbjct: 378 AEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHVDFKKA---KEKVMFKKK 434
Query: 645 E 645
E
Sbjct: 435 E 435
>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
symbol:psmc1a "proteasome (prosome, macropain) 26S
subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
Length = 440
Score = 371 (135.7 bits), Expect = 2.5e-33, P = 2.5e-33
Identities = 83/232 (35%), Positives = 132/232 (56%)
Query: 407 QYLERGVDVKFS--DMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQ 464
Q ++ V++ + + Y G++ KTLLAKAVA + F + S+
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSE 254
Query: 465 FVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLV 524
++ Y+G G VR L++ A+++APS+VFIDE+DA+G +R G +E T+ +LL
Sbjct: 255 LIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLN 314
Query: 525 CLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPM 584
LDGF+ RG+V I +TNR + LDPAL+RPGR DRKI P P + I ++H + +
Sbjct: 315 QLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTV 374
Query: 585 ADDV--DYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQ 634
ADDV D L +A D + GA++ I A + +R+ R ++T +D ++ +
Sbjct: 375 ADDVTLDDLILAK--DDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKE 424
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 393 (143.4 bits), Expect = 2.9e-33, P = 2.9e-33
Identities = 80/193 (41%), Positives = 116/193 (60%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KT+LAKAVA E NF S+ + + ++ G S +R ++ +A+ AP +VF+DELD++
Sbjct: 543 KTMLAKAVANECAANFISVKGPELLSMWFGESESNIRDIFDKARAAAPCIVFLDELDSIA 602
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+ RG G G D +NQLL +DG + NV I +TNRP+ LDPAL RPGR D I
Sbjct: 603 KARGGSVGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDPALCRPGRLDSLI 662
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
++P P +GR+ ILK RK P++DDVD +A+ T G GA+L I + A +++
Sbjct: 663 YVPLPDELGRLSILKAQLRKTPVSDDVDLQYIANKTHGFSGADLGFITQRAVKIAIKESI 722
Query: 622 T-EITTDDLLQAA 633
T +I L+AA
Sbjct: 723 TADINRTKALEAA 735
Score = 374 (136.7 bits), Expect = 3.6e-31, P = 3.6e-31
Identities = 86/239 (35%), Positives = 140/239 (58%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTL+A+AVA E G FF I+ + + G S +R ++EA+ N+P+++FIDE+D++
Sbjct: 269 KTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIA 328
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R K +G ER ++QLL +DG + R NV+ +A+TNRP+ +DPAL R GRFDR++
Sbjct: 329 PKRE--KTNGEVER-RVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREV 385
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
I P GR+EIL++H + + DDVD +A+ T G VG+++A + AA+ +R+
Sbjct: 386 DIGIPDPTGRLEILQIHTKNMKLGDDVDLEQIAAETHGYVGSDVAALCSEAAMQQIREKM 445
Query: 622 TEITTD-DLLQAAQIEERGMLDRKERSS-ETWRQVAINEAAMAVVA-VNFPDLKNIEFV 677
I D D + A ++ G+ R + A+ E A+ V V + D+ ++ V
Sbjct: 446 DLIDLDEDTIDAEVLDSLGVTMENFRFALGVSNPSALREVAVVEVPNVRWEDIGGLDEV 504
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 370 (135.3 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 80/230 (34%), Positives = 129/230 (56%)
Query: 407 QYLERGVDVKFS--DMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQ 464
Q ++ V++ + + Y G++ KTLLAKAVA + F + S+
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 254
Query: 465 FVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLV 524
++ Y+G G VR L++ A+++APS+VFIDE+DA+G +R G +E T+ +LL
Sbjct: 255 LIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLN 314
Query: 525 CLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPM 584
LDGF+ RG+V I +TNR + LDPAL+RPGR DRKI P P + I ++H + +
Sbjct: 315 QLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTL 374
Query: 585 ADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQ 634
ADDV + D + GA++ I A + +R+ R ++T +D ++ +
Sbjct: 375 ADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKE 424
>UNIPROTKB|Q2KIW6 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
Length = 389
Score = 370 (135.3 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 78/204 (38%), Positives = 120/204 (58%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+AVA + NF + +S V+ Y+G A +R ++ A+D+ P ++F+DE+DA+G
Sbjct: 180 KTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIG 239
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
R S +E TL +LL +DGF+ V I +TNRPD LDPAL+RPGR DRKI
Sbjct: 240 GRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKI 299
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
I P R++ILK+HA ++DY A+ ++DG GA+L N+ A + +R
Sbjct: 300 HIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLGNVCTEAGMFAIRADH 359
Query: 622 TEITTDDLLQAAQ-IEERGMLDRK 644
+ +D ++A + + + L+ K
Sbjct: 360 DFVVQEDFMKAVRKVADSKKLESK 383
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 370 (135.3 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 80/230 (34%), Positives = 129/230 (56%)
Query: 407 QYLERGVDVKFS--DMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQ 464
Q ++ V++ + + Y G++ KTLLAKAVA + F + S+
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 254
Query: 465 FVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLV 524
++ Y+G G VR L++ A+++APS+VFIDE+DA+G +R G +E T+ +LL
Sbjct: 255 LIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLN 314
Query: 525 CLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPM 584
LDGF+ RG+V I +TNR + LDPAL+RPGR DRKI P P + I ++H + +
Sbjct: 315 QLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTL 374
Query: 585 ADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQ 634
ADDV + D + GA++ I A + +R+ R ++T +D ++ +
Sbjct: 375 ADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKE 424
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 370 (135.3 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 80/230 (34%), Positives = 129/230 (56%)
Query: 407 QYLERGVDVKFS--DMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQ 464
Q ++ V++ + + Y G++ KTLLAKAVA + F + S+
Sbjct: 122 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 181
Query: 465 FVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLV 524
++ Y+G G VR L++ A+++APS+VFIDE+DA+G +R G +E T+ +LL
Sbjct: 182 LIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLN 241
Query: 525 CLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPM 584
LDGF+ RG+V I +TNR + LDPAL+RPGR DRKI P P + I ++H + +
Sbjct: 242 QLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTL 301
Query: 585 ADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQ 634
ADDV + D + GA++ I A + +R+ R ++T +D ++ +
Sbjct: 302 ADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKE 351
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 370 (135.3 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 80/230 (34%), Positives = 129/230 (56%)
Query: 407 QYLERGVDVKFS--DMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQ 464
Q ++ V++ + + Y G++ KTLLAKAVA + F + S+
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 254
Query: 465 FVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLV 524
++ Y+G G VR L++ A+++APS+VFIDE+DA+G +R G +E T+ +LL
Sbjct: 255 LIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLN 314
Query: 525 CLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPM 584
LDGF+ RG+V I +TNR + LDPAL+RPGR DRKI P P + I ++H + +
Sbjct: 315 QLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTL 374
Query: 585 ADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQ 634
ADDV + D + GA++ I A + +R+ R ++T +D ++ +
Sbjct: 375 ADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKE 424
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 370 (135.3 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 80/230 (34%), Positives = 129/230 (56%)
Query: 407 QYLERGVDVKFS--DMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQ 464
Q ++ V++ + + Y G++ KTLLAKAVA + F + S+
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 254
Query: 465 FVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLV 524
++ Y+G G VR L++ A+++APS+VFIDE+DA+G +R G +E T+ +LL
Sbjct: 255 LIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLN 314
Query: 525 CLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPM 584
LDGF+ RG+V I +TNR + LDPAL+RPGR DRKI P P + I ++H + +
Sbjct: 315 QLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTL 374
Query: 585 ADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQ 634
ADDV + D + GA++ I A + +R+ R ++T +D ++ +
Sbjct: 375 ADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKE 424
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 370 (135.3 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 80/230 (34%), Positives = 129/230 (56%)
Query: 407 QYLERGVDVKFS--DMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQ 464
Q ++ V++ + + Y G++ KTLLAKAVA + F + S+
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 254
Query: 465 FVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLV 524
++ Y+G G VR L++ A+++APS+VFIDE+DA+G +R G +E T+ +LL
Sbjct: 255 LIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLN 314
Query: 525 CLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPM 584
LDGF+ RG+V I +TNR + LDPAL+RPGR DRKI P P + I ++H + +
Sbjct: 315 QLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTL 374
Query: 585 ADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQ 634
ADDV + D + GA++ I A + +R+ R ++T +D ++ +
Sbjct: 375 ADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKE 424
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 370 (135.3 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 80/230 (34%), Positives = 129/230 (56%)
Query: 407 QYLERGVDVKFS--DMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQ 464
Q ++ V++ + + Y G++ KTLLAKAVA + F + S+
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 254
Query: 465 FVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLV 524
++ Y+G G VR L++ A+++APS+VFIDE+DA+G +R G +E T+ +LL
Sbjct: 255 LIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLN 314
Query: 525 CLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPM 584
LDGF+ RG+V I +TNR + LDPAL+RPGR DRKI P P + I ++H + +
Sbjct: 315 QLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTL 374
Query: 585 ADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQ 634
ADDV + D + GA++ I A + +R+ R ++T +D ++ +
Sbjct: 375 ADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKE 424
>ASPGD|ASPL0000049719 [details] [associations]
symbol:AN2213 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0043171 "peptide catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001307
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER
OrthoDB:EOG4FN7S6 EMBL:AACD01000035 RefSeq:XP_659817.1
ProteinModelPortal:Q5BB67 STRING:Q5BB67
EnsemblFungi:CADANIAT00008897 GeneID:2875757 KEGG:ani:AN2213.2
Uniprot:Q5BB67
Length = 460
Score = 369 (135.0 bits), Expect = 4.0e-33, P = 4.0e-33
Identities = 83/227 (36%), Positives = 126/227 (55%)
Query: 419 DMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVR 478
++Y G++ KTLLAKAVA + F I S+ ++ Y+G G VR
Sbjct: 228 ELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLVR 287
Query: 479 SLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITI 538
++Q A ++APS+VFIDE+DA+G +R G +E T+ +LL LDGF+ RG+V I
Sbjct: 288 QIFQVAAEHAPSIVFIDEIDAIGTKRYDSTSGGEREIQRTMLELLNQLDGFDDRGDVKVI 347
Query: 539 ASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTD 598
+TN+ + LDPAL+RPGR DRKI P + +I +H K + DDVD + D
Sbjct: 348 MATNKIETLDPALIRPGRIDRKILFENPDQNTKKKIFTLHTSKMSLGDDVDLDEFINQKD 407
Query: 599 GMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKE 645
+ GA++ I A + +R+ R + DD +AA+ ER M +++
Sbjct: 408 DLSGADIRAICTEAGLMALRERRMRVQMDDF-RAAR--ERIMKTKQD 451
>UNIPROTKB|F1NCS8 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 OMA:EHKEVES EMBL:AADN02004069
IPI:IPI00570965 Ensembl:ENSGALT00000020277 ArrayExpress:F1NCS8
Uniprot:F1NCS8
Length = 403
Score = 369 (135.0 bits), Expect = 4.0e-33, P = 4.0e-33
Identities = 78/204 (38%), Positives = 120/204 (58%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+AVA + NF + +S V+ Y+G A +R ++ A+D+ P ++F+DE+DA+G
Sbjct: 194 KTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIG 253
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
R S +E TL +LL +DGF+ V I +TNRPD LDPAL+RPGR DRKI
Sbjct: 254 GRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKI 313
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
I P R++ILK+HA ++DY A+ ++DG GA+L N+ A + +R
Sbjct: 314 HIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADH 373
Query: 622 TEITTDDLLQAAQ-IEERGMLDRK 644
+ +D ++A + + + L+ K
Sbjct: 374 DFVVQEDFMKAVRKVADSKKLESK 397
>UNIPROTKB|Q5ZKX2 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826 EMBL:AADN02004069
EMBL:AJ719962 IPI:IPI00820938 RefSeq:NP_001006494.1
UniGene:Gga.16005 STRING:Q5ZKX2 Ensembl:ENSGALT00000037197
GeneID:423586 KEGG:gga:423586 InParanoid:Q5ZKX2 NextBio:20826039
Uniprot:Q5ZKX2
Length = 389
Score = 369 (135.0 bits), Expect = 4.0e-33, P = 4.0e-33
Identities = 78/204 (38%), Positives = 120/204 (58%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+AVA + NF + +S V+ Y+G A +R ++ A+D+ P ++F+DE+DA+G
Sbjct: 180 KTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIG 239
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
R S +E TL +LL +DGF+ V I +TNRPD LDPAL+RPGR DRKI
Sbjct: 240 GRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKI 299
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
I P R++ILK+HA ++DY A+ ++DG GA+L N+ A + +R
Sbjct: 300 HIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADH 359
Query: 622 TEITTDDLLQAAQ-IEERGMLDRK 644
+ +D ++A + + + L+ K
Sbjct: 360 DFVVQEDFMKAVRKVADSKKLESK 383
>UNIPROTKB|F1MLV1 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
Length = 389
Score = 369 (135.0 bits), Expect = 4.0e-33, P = 4.0e-33
Identities = 78/204 (38%), Positives = 120/204 (58%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+AVA + NF + +S V+ Y+G A +R ++ A+D+ P ++F+DE+DA+G
Sbjct: 180 KTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIG 239
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
R S +E TL +LL +DGF+ V I +TNRPD LDPAL+RPGR DRKI
Sbjct: 240 GRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKI 299
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
I P R++ILK+HA ++DY A+ ++DG GA+L N+ A + +R
Sbjct: 300 HIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADH 359
Query: 622 TEITTDDLLQAAQ-IEERGMLDRK 644
+ +D ++A + + + L+ K
Sbjct: 360 DFVVQEDFMKAVRKVADSKKLESK 383
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 369 (135.0 bits), Expect = 4.0e-33, P = 4.0e-33
Identities = 78/204 (38%), Positives = 120/204 (58%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+AVA + NF + +S V+ Y+G A +R ++ A+D+ P ++F+DE+DA+G
Sbjct: 186 KTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIG 245
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
R S +E TL +LL +DGF+ V I +TNRPD LDPAL+RPGR DRKI
Sbjct: 246 GRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKI 305
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
I P R++ILK+HA ++DY A+ ++DG GA+L N+ A + +R
Sbjct: 306 HIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADH 365
Query: 622 TEITTDDLLQAAQ-IEERGMLDRK 644
+ +D ++A + + + L+ K
Sbjct: 366 DFVVQEDFMKAVRKVADSKKLESK 389
>UNIPROTKB|P62333 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
Uniprot:P62333
Length = 389
Score = 369 (135.0 bits), Expect = 4.0e-33, P = 4.0e-33
Identities = 78/204 (38%), Positives = 120/204 (58%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+AVA + NF + +S V+ Y+G A +R ++ A+D+ P ++F+DE+DA+G
Sbjct: 180 KTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIG 239
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
R S +E TL +LL +DGF+ V I +TNRPD LDPAL+RPGR DRKI
Sbjct: 240 GRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKI 299
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
I P R++ILK+HA ++DY A+ ++DG GA+L N+ A + +R
Sbjct: 300 HIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADH 359
Query: 622 TEITTDDLLQAAQ-IEERGMLDRK 644
+ +D ++A + + + L+ K
Sbjct: 360 DFVVQEDFMKAVRKVADSKKLESK 383
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 369 (135.0 bits), Expect = 4.0e-33, P = 4.0e-33
Identities = 78/204 (38%), Positives = 120/204 (58%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+AVA + NF + +S V+ Y+G A +R ++ A+D+ P ++F+DE+DA+G
Sbjct: 194 KTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIG 253
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
R S +E TL +LL +DGF+ V I +TNRPD LDPAL+RPGR DRKI
Sbjct: 254 GRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKI 313
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
I P R++ILK+HA ++DY A+ ++DG GA+L N+ A + +R
Sbjct: 314 HIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADH 373
Query: 622 TEITTDDLLQAAQ-IEERGMLDRK 644
+ +D ++A + + + L+ K
Sbjct: 374 DFVVQEDFMKAVRKVADSKKLESK 397
>UNIPROTKB|P62335 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:43179 "Spermophilus tridecemlineatus" [GO:0022624
"proteasome accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
Length = 389
Score = 369 (135.0 bits), Expect = 4.0e-33, P = 4.0e-33
Identities = 78/204 (38%), Positives = 120/204 (58%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+AVA + NF + +S V+ Y+G A +R ++ A+D+ P ++F+DE+DA+G
Sbjct: 180 KTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIG 239
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
R S +E TL +LL +DGF+ V I +TNRPD LDPAL+RPGR DRKI
Sbjct: 240 GRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKI 299
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
I P R++ILK+HA ++DY A+ ++DG GA+L N+ A + +R
Sbjct: 300 HIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADH 359
Query: 622 TEITTDDLLQAAQ-IEERGMLDRK 644
+ +D ++A + + + L+ K
Sbjct: 360 DFVVQEDFMKAVRKVADSKKLESK 383
>MGI|MGI:1914339 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
GermOnline:ENSMUSG00000021832 Uniprot:P62334
Length = 389
Score = 369 (135.0 bits), Expect = 4.0e-33, P = 4.0e-33
Identities = 78/204 (38%), Positives = 120/204 (58%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+AVA + NF + +S V+ Y+G A +R ++ A+D+ P ++F+DE+DA+G
Sbjct: 180 KTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIG 239
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
R S +E TL +LL +DGF+ V I +TNRPD LDPAL+RPGR DRKI
Sbjct: 240 GRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKI 299
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
I P R++ILK+HA ++DY A+ ++DG GA+L N+ A + +R
Sbjct: 300 HIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADH 359
Query: 622 TEITTDDLLQAAQ-IEERGMLDRK 644
+ +D ++A + + + L+ K
Sbjct: 360 DFVVQEDFMKAVRKVADSKKLESK 383
>RGD|1308825 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308825 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 RefSeq:NP_001093979.1 UniGene:Rn.103233
GeneID:289990 KEGG:rno:289990 NextBio:630545 EMBL:BC107950
IPI:IPI00362105 ProteinModelPortal:Q32PW9 IntAct:Q32PW9
STRING:Q32PW9 PhosphoSite:Q32PW9 PRIDE:Q32PW9 UCSC:RGD:1308825
InParanoid:Q32PW9 ArrayExpress:Q32PW9 Genevestigator:Q32PW9
Uniprot:Q32PW9
Length = 381
Score = 369 (135.0 bits), Expect = 4.0e-33, P = 4.0e-33
Identities = 78/204 (38%), Positives = 120/204 (58%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+AVA + NF + +S V+ Y+G A +R ++ A+D+ P ++F+DE+DA+G
Sbjct: 172 KTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIG 231
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
R S +E TL +LL +DGF+ V I +TNRPD LDPAL+RPGR DRKI
Sbjct: 232 GRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKI 291
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
I P R++ILK+HA ++DY A+ ++DG GA+L N+ A + +R
Sbjct: 292 HIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADH 351
Query: 622 TEITTDDLLQAAQ-IEERGMLDRK 644
+ +D ++A + + + L+ K
Sbjct: 352 DFVVQEDFMKAVRKVADSKKLESK 375
>RGD|2318218 [details] [associations]
symbol:LOC100365869 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
Length = 403
Score = 369 (135.0 bits), Expect = 4.0e-33, P = 4.0e-33
Identities = 78/204 (38%), Positives = 120/204 (58%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+AVA + NF + +S V+ Y+G A +R ++ A+D+ P ++F+DE+DA+G
Sbjct: 194 KTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIG 253
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
R S +E TL +LL +DGF+ V I +TNRPD LDPAL+RPGR DRKI
Sbjct: 254 GRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKI 313
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
I P R++ILK+HA ++DY A+ ++DG GA+L N+ A + +R
Sbjct: 314 HIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADH 373
Query: 622 TEITTDDLLQAAQ-IEERGMLDRK 644
+ +D ++A + + + L+ K
Sbjct: 374 DFVVQEDFMKAVRKVADSKKLESK 397
>TAIR|locus:2119926 [details] [associations]
symbol:RPT2a "regulatory particle AAA-ATPase 2A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0010078 "maintenance of root
meristem identity" evidence=IMP] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0035266 "meristem growth"
evidence=IMP] [GO:0048367 "shoot system development" evidence=IMP]
[GO:0048827 "phyllome development" evidence=IMP] [GO:0048829 "root
cap development" evidence=IMP] [GO:0046686 "response to cadmium
ion" evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA;IMP] [GO:0043248 "proteasome assembly"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0051788 "response to misfolded protein" evidence=RCA;IMP]
[GO:0080129 "proteasome core complex assembly" evidence=RCA;IMP]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0007292 "female gamete generation"
evidence=IGI] [GO:0048232 "male gamete generation" evidence=IGI]
[GO:0090351 "seedling development" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051510 "regulation of
unidimensional cell growth" evidence=RCA] [GO:0060968 "regulation
of gene silencing" evidence=IMP] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046686 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043161 GO:GO:0016020 EMBL:AL078470
EMBL:AL161574 GO:GO:0009408 GO:GO:0010311 GO:GO:0048829
GO:GO:0000502 GO:GO:0043248 GO:GO:0017111 GO:GO:0009965
GO:GO:0009933 EMBL:AL078469 GO:GO:0007292 GO:GO:0060968
GO:GO:0010078 HSSP:P43773 GO:GO:0051788 GO:GO:0090351 GO:GO:0048232
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123391 EMBL:AB161192 EMBL:AY034975 IPI:IPI00538666
PIR:T08959 RefSeq:NP_194633.1 UniGene:At.24596
ProteinModelPortal:Q9SZD4 SMR:Q9SZD4 IntAct:Q9SZD4 STRING:Q9SZD4
PaxDb:Q9SZD4 PRIDE:Q9SZD4 EnsemblPlants:AT4G29040.1 GeneID:829025
KEGG:ath:AT4G29040 GeneFarm:1494 TAIR:At4g29040 InParanoid:Q9SZD4
KO:K03062 OMA:SAIVMEA PhylomeDB:Q9SZD4 ProtClustDB:CLSN2683303
GO:GO:0035266 Uniprot:Q9SZD4
Length = 443
Score = 369 (135.0 bits), Expect = 4.0e-33, P = 4.0e-33
Identities = 86/241 (35%), Positives = 132/241 (54%)
Query: 407 QYLERGVDVKFS--DMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQ 464
Q ++ V++ + ++Y G++ KTLLAKAVA F + S+
Sbjct: 198 QEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSE 257
Query: 465 FVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLV 524
++ Y+G G VR L++ A D +PS+VFIDE+DAVG +R G +E T+ +LL
Sbjct: 258 LIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLN 317
Query: 525 CLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPM 584
LDGF+ RG+V I +TNR + LDPAL+RPGR DRKI P P + R I ++H K +
Sbjct: 318 QLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTL 377
Query: 585 ADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRK 644
++DV+ D GA++ I A + +R+ R ++T D +A +E+ M +K
Sbjct: 378 SEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHPDFKKA---KEKVMFKKK 434
Query: 645 E 645
E
Sbjct: 435 E 435
>ZFIN|ZDB-GENE-030131-666 [details] [associations]
symbol:psmc3 "proteasome (prosome, macropain) 26S
subunit, ATPase, 3" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-666 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 EMBL:BX957297 IPI:IPI00817732 PRIDE:F1QJQ2
Ensembl:ENSDART00000133705 ArrayExpress:F1QJQ2 Bgee:F1QJQ2
Uniprot:F1QJQ2
Length = 427
Score = 368 (134.6 bits), Expect = 5.2e-33, P = 5.2e-33
Identities = 78/190 (41%), Positives = 116/190 (61%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+A A + F ++ Q V++++G GA VR + AK+ APS++FIDELDA+G
Sbjct: 221 KTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIG 280
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R + +G +E T+ +LL LDGF+ V IA+TNR DILDPAL+R GR DRKI
Sbjct: 281 TKRFDSEKAGDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKI 340
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
P P R I+++H+RK + DV++ +A TD GA+ + A + +R G
Sbjct: 341 EFPMPNEEARARIMQIHSRKMNVCPDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGA 400
Query: 622 TEITTDDLLQ 631
TE+ +D ++
Sbjct: 401 TELNHEDYME 410
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 367 (134.2 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 79/230 (34%), Positives = 128/230 (55%)
Query: 407 QYLERGVDVKFS--DMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQ 464
Q ++ V++ + + Y G++ KTLLAKAVA + F + S+
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 254
Query: 465 FVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLV 524
++ Y+G G VR L++ A+++ PS+VFIDE+DA+G +R G +E T+ +LL
Sbjct: 255 LIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLN 314
Query: 525 CLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPM 584
LDGF+ RG+V I +TNR + LDPAL+RPGR DRKI P P + I ++H + +
Sbjct: 315 QLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTL 374
Query: 585 ADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQ 634
ADDV + D + GA++ I A + +R+ R ++T +D ++ +
Sbjct: 375 ADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKE 424
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 367 (134.2 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 82/211 (38%), Positives = 121/211 (57%)
Query: 419 DMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVR 478
+ + + GVR KTL+A+A A + F ++ Q V++++G GA VR
Sbjct: 195 ERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVR 254
Query: 479 SLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITI 538
+Q AK+ AP ++FIDE+DA+G +R + SG +E T+ +LL LDGF + I
Sbjct: 255 DAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVI 314
Query: 539 ASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTD 598
A+TNR DILDPAL+R GR DRKI P P R IL++H+RK + DV++ +A TD
Sbjct: 315 AATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTD 374
Query: 599 GMVGAELANI-VEVAAINMMRDGRTEITTDD 628
GA+L + VE + + RD TE+ +D
Sbjct: 375 DFNGAQLKAVCVEAGMLALRRDA-TEVNHED 404
>ZFIN|ZDB-GENE-040625-69 [details] [associations]
symbol:psmc1b "proteasome (prosome, macropain) 26S
subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
Length = 440
Score = 367 (134.2 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 79/230 (34%), Positives = 129/230 (56%)
Query: 407 QYLERGVDVKFS--DMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQ 464
Q ++ V++ + + Y G++ KTLLAKAVA + F + S+
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSE 254
Query: 465 FVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLV 524
++ Y+G G VR L++ A+++APS+VFIDE+DA+G +R G +E T+ +LL
Sbjct: 255 LIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLN 314
Query: 525 CLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPM 584
LDGF+ RG+V I +TNR + LDPAL+RPGR DRKI P P + I ++H + +
Sbjct: 315 QLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTV 374
Query: 585 ADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQ 634
A+DV + D + GA++ I A + +R+ R ++T +D ++ +
Sbjct: 375 AEDVSLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKE 424
>ZFIN|ZDB-GENE-030131-5408 [details] [associations]
symbol:vcp "valosin containing protein"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA;ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0035861 "site of double-strand
break" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
[GO:2000058 "regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-030131-5408 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0006810 EMBL:CR318632 GO:GO:0016567 GO:GO:0007049
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK GeneTree:ENSGT00700000104534
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:AB093594 EMBL:AY576993 EMBL:BC050488 EMBL:BC067384
IPI:IPI00505091 RefSeq:NP_958889.1 UniGene:Dr.75122
ProteinModelPortal:Q7ZU99 SMR:Q7ZU99 STRING:Q7ZU99 PRIDE:Q7ZU99
Ensembl:ENSDART00000023779 GeneID:327197 KEGG:dre:327197
InParanoid:Q76KA4 NextBio:20809924 Bgee:Q7ZU99 Uniprot:Q7ZU99
Length = 806
Score = 389 (142.0 bits), Expect = 7.5e-33, P = 7.5e-33
Identities = 87/218 (39%), Positives = 126/218 (57%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKA+A E NF SI + + ++ G + VR ++ +A+ AP V+F DELD++
Sbjct: 524 KTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIA 583
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+ RG G GG D +NQ+L +DG + NV I +TNRPDI+DPA++RPGR D+ I
Sbjct: 584 KARGGNVGDGGGAADRVINQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLI 643
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG- 620
+IP P R+ ILK + RK P++ DVD +A MT+G GA+L I + A +R+
Sbjct: 644 YIPLPDEKSRIAILKANLRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESI 703
Query: 621 RTEITTDDLLQ----AAQIEERGMLD--RKERSSETWR 652
EI + Q A ++EE + RK+ E R
Sbjct: 704 ENEIRRERERQTNPSAMEVEEDDPVPEIRKDHFEEAMR 741
Score = 381 (139.2 bits), Expect = 5.8e-32, P = 5.8e-32
Identities = 102/274 (37%), Positives = 156/274 (56%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTL+A+AVA E G FF I+ + + G S +R ++EA+ NAP+++FIDELDA+
Sbjct: 251 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIA 310
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R K G ER ++QLL +DG + R +VI +A+TNRP+ +DPAL R GRFDR++
Sbjct: 311 PKRE--KTHGEVER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREV 367
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
I P GR+EIL++H + +ADDVD VA+ T G VGA+LA + AA+ +R
Sbjct: 368 DIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKM 427
Query: 622 TEITTDDLLQAAQIEER---GMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEFVT 678
I +D A++ M D + S++ A+ E + V + + D+ ++ V
Sbjct: 428 DLIDLEDETIDAEVMNSLAVTMDDFRWALSQS-NPSALRETVVEVPNITWEDIGGLDDVK 486
Query: 679 IAPRAGRELGYVRMKMDHM-KF-KEGMLSRQSLL 710
R +EL V+ ++H KF K GM + +L
Sbjct: 487 ---RELQEL--VQYPVEHPDKFLKFGMTPSKGVL 515
>UNIPROTKB|J9NWA6 [details] [associations]
symbol:LOC100687152 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AAEX03026457 Ensembl:ENSCAFT00000026372 OMA:REAVEQP
Uniprot:J9NWA6
Length = 434
Score = 366 (133.9 bits), Expect = 8.5e-33, P = 8.5e-33
Identities = 78/190 (41%), Positives = 116/190 (61%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+A A + F ++ Q V++++G GA VR + AK+ APS++FIDELDA G
Sbjct: 228 KTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDATG 287
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R + +G +E T+ +LL LDGF+ V IA+TNR DILDPAL+R GR D+KI
Sbjct: 288 TKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDQKI 347
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
P P R I+++H+RK ++ DV+Y +A D GA+ + A + +R G
Sbjct: 348 EFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCMDDFNGAQCKAVCVEAGMIALRRGT 407
Query: 622 TEITTDDLLQ 631
TE+T +D ++
Sbjct: 408 TELTHEDYME 417
>WB|WBGene00004505 [details] [associations]
symbol:rpt-5 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:FO080337
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371
SMR:O76371 IntAct:O76371 MINT:MINT-211164 STRING:O76371
PaxDb:O76371 EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2
GeneID:172238 KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238
WormBase:F56H1.4 InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 366 (133.9 bits), Expect = 8.5e-33, P = 8.5e-33
Identities = 78/192 (40%), Positives = 120/192 (62%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KT++A+AVA + F ++ Q V++++G GA VR + AK+ AP+++FIDELDA+G
Sbjct: 224 KTMMARAVAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIG 283
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R + +G +E T+ +LL LDGF+ ++ IA+TNR D+LDPAL+R GR DRKI
Sbjct: 284 TKRFDSEKAGDREVQRTMLELLNQLDGFQPNDDIKVIAATNRIDVLDPALLRSGRLDRKI 343
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANI-VEVAAINMMRDG 620
+P P R I+++H+RK + DV++ +A TD GA+ + VE I + RD
Sbjct: 344 ELPHPNEDARARIMQIHSRKMNVNKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRDA 403
Query: 621 RTEITTDDLLQA 632
TEI +D + A
Sbjct: 404 -TEILHEDFMDA 414
>UNIPROTKB|O76371 [details] [associations]
symbol:rpt-5 "Protein RPT-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
GeneTree:ENSGT00560000077230 EMBL:FO080337 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371 SMR:O76371
IntAct:O76371 MINT:MINT-211164 STRING:O76371 PaxDb:O76371
EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2 GeneID:172238
KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238 WormBase:F56H1.4
InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 366 (133.9 bits), Expect = 8.5e-33, P = 8.5e-33
Identities = 78/192 (40%), Positives = 120/192 (62%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KT++A+AVA + F ++ Q V++++G GA VR + AK+ AP+++FIDELDA+G
Sbjct: 224 KTMMARAVAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIG 283
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R + +G +E T+ +LL LDGF+ ++ IA+TNR D+LDPAL+R GR DRKI
Sbjct: 284 TKRFDSEKAGDREVQRTMLELLNQLDGFQPNDDIKVIAATNRIDVLDPALLRSGRLDRKI 343
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANI-VEVAAINMMRDG 620
+P P R I+++H+RK + DV++ +A TD GA+ + VE I + RD
Sbjct: 344 ELPHPNEDARARIMQIHSRKMNVNKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRDA 403
Query: 621 RTEITTDDLLQA 632
TEI +D + A
Sbjct: 404 -TEILHEDFMDA 414
>ZFIN|ZDB-GENE-060312-22 [details] [associations]
symbol:zgc:136908 "zgc:136908" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-060312-22
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 HOGENOM:HOG000223224
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 HOVERGEN:HBG001226 EMBL:CU571167
EMBL:BC114306 IPI:IPI00835697 RefSeq:NP_001035017.1
UniGene:Dr.47664 SMR:Q29RA2 STRING:Q29RA2
Ensembl:ENSDART00000100551 GeneID:563679 KEGG:dre:563679
InParanoid:Q29RA2 OrthoDB:EOG4WWRMB NextBio:20885016 Uniprot:Q29RA2
Length = 805
Score = 388 (141.6 bits), Expect = 9.7e-33, P = 9.7e-33
Identities = 94/279 (33%), Positives = 146/279 (52%)
Query: 415 VKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGA 474
V++ D + + G+ KTLLAKA+A E NF SI + + ++ G
Sbjct: 499 VEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANECQANFVSIKGPELLTMWFGESE 558
Query: 475 SRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGN 534
+ VR ++ +A+ AP ++F DELD++ + RG G G D +NQ+L +DG + N
Sbjct: 559 ANVRDVFDKARQAAPCILFFDELDSIAKARGGGAGDAGGAADRVINQILTEMDGMTNKKN 618
Query: 535 VITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVA 594
V I +TNRPDI+DPA++RPGR D+ I+IP P + R IL+ + RK P+A DVD + ++
Sbjct: 619 VFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDMPSRTAILRANLRKSPVAKDVDLMYLS 678
Query: 595 SMTDGMVGAELANIVEVAAINMMRDG-RTEITTDDLLQAAQIEERGMLDRKERSSETWRQ 653
+T+G GA+L I + A +R+ EI + QA + E M D + E R+
Sbjct: 679 KITEGFSGADLTEICQRACKLAIREAIEAEIRAERQRQARK--ETAMDDDYDPVPEI-RK 735
Query: 654 VAINEAA-MAVVAVNFPDLKNIEFVTIAPRAGRELGYVR 691
EA A +V+ D++ E + R G R
Sbjct: 736 DHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGNFR 774
Score = 371 (135.7 bits), Expect = 7.4e-31, P = 7.4e-31
Identities = 91/239 (38%), Positives = 140/239 (58%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTL+A+AVA E G FF I+ + + G S +R ++EA+ NAP+++FIDELDA+
Sbjct: 253 KTLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIA 312
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R K G ER ++QLL +DG + R +V+ +A+TNRP+ +D AL R GRFDR+I
Sbjct: 313 PKRE--KTHGEVER-RIVSQLLTLMDGLKQRAHVVVMAATNRPNSVDAALRRFGRFDREI 369
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
I P GR+EIL++H + +++DVD +++ T G VGA+LA + AA+ +R
Sbjct: 370 DIGIPDSTGRLEILQIHTKNMKLSEDVDLEQISAETHGHVGADLAALCSEAALQAIRKKM 429
Query: 622 TEITT-DDLLQAAQIEERG--MLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEFV 677
T I DD + A + M D K S++ A+ E + V VN+ D+ ++ V
Sbjct: 430 TLIDLEDDSIDADLLNSLAVTMDDFKWALSQS-NPSALRETVVEVPHVNWEDIGGLDEV 487
>UNIPROTKB|G3X757 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
Length = 806
Score = 388 (141.6 bits), Expect = 9.8e-33, P = 9.8e-33
Identities = 84/201 (41%), Positives = 121/201 (60%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKA+A E NF SI + + ++ G + VR ++ +A+ AP V+F DELD++
Sbjct: 524 KTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIA 583
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+ RG G GG D +NQ+L +DG + NV I +TNRPDI+DPA++RPGR D+ I
Sbjct: 584 KARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLI 643
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG- 620
+IP P R+ ILK + RK P+A DVD +A MT+G GA+L I + A +R+
Sbjct: 644 YIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESI 703
Query: 621 RTEITTDDLLQ----AAQIEE 637
+EI + Q A ++EE
Sbjct: 704 ESEIRRERERQTNPSAMEVEE 724
Score = 386 (140.9 bits), Expect = 1.6e-32, P = 1.6e-32
Identities = 104/274 (37%), Positives = 156/274 (56%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTL+A+AVA E G FF I+ + + G S +R ++EA+ NAP+++FIDELDA+
Sbjct: 251 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIA 310
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R K G ER ++QLL +DG + R +VI +A+TNRP+ +DPAL R GRFDR++
Sbjct: 311 PKRE--KTHGEVER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREV 367
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
I P GR+EIL++H + +ADDVD VA+ T G VGA+LA + AA+ +R
Sbjct: 368 DIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKM 427
Query: 622 TEITTDDLLQAAQIEER---GMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEFVT 678
I +D A++ M D + S++ A+ E + V V + D+ +E V
Sbjct: 428 DLIDLEDETIDAEVMNSLAVTMDDFRWALSQS-NPSALRETVVEVPQVTWEDIGGLEDVK 486
Query: 679 IAPRAGRELGYVRMKMDHM-KF-KEGMLSRQSLL 710
R +EL V+ ++H KF K GM + +L
Sbjct: 487 ---RELQEL--VQYPVEHPDKFLKFGMTPSKGVL 515
>UNIPROTKB|Q3ZBT1 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
EMBL:BC103125 IPI:IPI00710727 RefSeq:NP_001029466.1
UniGene:Bt.49331 ProteinModelPortal:Q3ZBT1 SMR:Q3ZBT1 IntAct:Q3ZBT1
STRING:Q3ZBT1 PRIDE:Q3ZBT1 GeneID:507345 KEGG:bta:507345 CTD:7415
InParanoid:Q3ZBT1 OrthoDB:EOG45TCMK NextBio:20868019 Uniprot:Q3ZBT1
Length = 806
Score = 388 (141.6 bits), Expect = 9.8e-33, P = 9.8e-33
Identities = 84/201 (41%), Positives = 121/201 (60%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKA+A E NF SI + + ++ G + VR ++ +A+ AP V+F DELD++
Sbjct: 524 KTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIA 583
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+ RG G GG D +NQ+L +DG + NV I +TNRPDI+DPA++RPGR D+ I
Sbjct: 584 KARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLI 643
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG- 620
+IP P R+ ILK + RK P+A DVD +A MT+G GA+L I + A +R+
Sbjct: 644 YIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESI 703
Query: 621 RTEITTDDLLQ----AAQIEE 637
+EI + Q A ++EE
Sbjct: 704 ESEIRRERERQTNPSAMEVEE 724
Score = 386 (140.9 bits), Expect = 1.6e-32, P = 1.6e-32
Identities = 104/274 (37%), Positives = 156/274 (56%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTL+A+AVA E G FF I+ + + G S +R ++EA+ NAP+++FIDELDA+
Sbjct: 251 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIA 310
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R K G ER ++QLL +DG + R +VI +A+TNRP+ +DPAL R GRFDR++
Sbjct: 311 PKRE--KTHGEVER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREV 367
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
I P GR+EIL++H + +ADDVD VA+ T G VGA+LA + AA+ +R
Sbjct: 368 DIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKM 427
Query: 622 TEITTDDLLQAAQIEER---GMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEFVT 678
I +D A++ M D + S++ A+ E + V V + D+ +E V
Sbjct: 428 DLIDLEDETIDAEVMNSLAVTMDDFRWALSQS-NPSALRETVVEVPQVTWEDIGGLEDVK 486
Query: 679 IAPRAGRELGYVRMKMDHM-KF-KEGMLSRQSLL 710
R +EL V+ ++H KF K GM + +L
Sbjct: 487 ---RELQEL--VQYPVEHPDKFLKFGMTPSKGVL 515
>UNIPROTKB|P55072 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;TAS] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA;NAS] [GO:0042981 "regulation of
apoptotic process" evidence=TAS] [GO:0045184 "establishment of
protein localization" evidence=TAS] [GO:0019985 "translesion
synthesis" evidence=IMP] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IMP] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0019903 "protein phosphatase binding" evidence=IPI] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0031334
GO:GO:0051260 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0006919 EMBL:CH471071 GO:GO:0030433 GO:GO:0006302
GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279 GO:GO:0031593
GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 Orphanet:803 PDB:3TIW
PDBsum:3TIW GO:GO:0030968 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 TCDB:3.A.16.1.1 GO:GO:0070842 GO:GO:0035861
GO:GO:0019985 EMBL:AC004472 EMBL:AL353795 PDB:3QC8 PDB:3QQ8
PDB:3QWZ PDBsum:3QC8 PDBsum:3QQ8 PDBsum:3QWZ HOVERGEN:HBG001226
PDB:3EBB PDBsum:3EBB CTD:7415 OrthoDB:EOG45TCMK EMBL:AF100752
EMBL:AK312310 EMBL:BC110913 EMBL:BC121794 EMBL:Z70768
IPI:IPI00022774 PIR:T02243 RefSeq:NP_009057.1 UniGene:Hs.529782
PDB:3HU1 PDB:3HU2 PDB:3HU3 PDB:3QQ7 PDBsum:3HU1 PDBsum:3HU2
PDBsum:3HU3 PDBsum:3QQ7 ProteinModelPortal:P55072 SMR:P55072
DIP:DIP-33543N IntAct:P55072 MINT:MINT-272884 STRING:P55072
PhosphoSite:P55072 DMDM:6094447 DOSAC-COBS-2DPAGE:P55072 OGP:P55072
REPRODUCTION-2DPAGE:IPI00022774 REPRODUCTION-2DPAGE:P55072
PaxDb:P55072 PRIDE:P55072 Ensembl:ENST00000358901 GeneID:7415
KEGG:hsa:7415 UCSC:uc003zvy.2 GeneCards:GC09M035056 HGNC:HGNC:12666
HPA:CAB005593 HPA:HPA012728 HPA:HPA012814 MIM:167320 MIM:601023
MIM:613954 neXtProt:NX_P55072 Orphanet:52430 PharmGKB:PA37289
InParanoid:P55072 BindingDB:P55072 ChEMBL:CHEMBL1075145 ChiTaRS:VCP
EvolutionaryTrace:P55072 GenomeRNAi:7415 NextBio:29034
ArrayExpress:P55072 Bgee:P55072 CleanEx:HS_VCP
Genevestigator:P55072 GermOnline:ENSG00000165280 Uniprot:P55072
Length = 806
Score = 388 (141.6 bits), Expect = 9.8e-33, P = 9.8e-33
Identities = 84/201 (41%), Positives = 121/201 (60%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKA+A E NF SI + + ++ G + VR ++ +A+ AP V+F DELD++
Sbjct: 524 KTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIA 583
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+ RG G GG D +NQ+L +DG + NV I +TNRPDI+DPA++RPGR D+ I
Sbjct: 584 KARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLI 643
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG- 620
+IP P R+ ILK + RK P+A DVD +A MT+G GA+L I + A +R+
Sbjct: 644 YIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESI 703
Query: 621 RTEITTDDLLQ----AAQIEE 637
+EI + Q A ++EE
Sbjct: 704 ESEIRRERERQTNPSAMEVEE 724
Score = 386 (140.9 bits), Expect = 1.6e-32, P = 1.6e-32
Identities = 104/274 (37%), Positives = 156/274 (56%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTL+A+AVA E G FF I+ + + G S +R ++EA+ NAP+++FIDELDA+
Sbjct: 251 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIA 310
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R K G ER ++QLL +DG + R +VI +A+TNRP+ +DPAL R GRFDR++
Sbjct: 311 PKRE--KTHGEVER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREV 367
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
I P GR+EIL++H + +ADDVD VA+ T G VGA+LA + AA+ +R
Sbjct: 368 DIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKM 427
Query: 622 TEITTDDLLQAAQIEER---GMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEFVT 678
I +D A++ M D + S++ A+ E + V V + D+ +E V
Sbjct: 428 DLIDLEDETIDAEVMNSLAVTMDDFRWALSQS-NPSALRETVVEVPQVTWEDIGGLEDVK 486
Query: 679 IAPRAGRELGYVRMKMDHM-KF-KEGMLSRQSLL 710
R +EL V+ ++H KF K GM + +L
Sbjct: 487 ---RELQEL--VQYPVEHPDKFLKFGMTPSKGVL 515
>MGI|MGI:99919 [details] [associations]
symbol:Vcp "valosin containing protein" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=ISO] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0019985 "translesion synthesis" evidence=ISO]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISO] [GO:0031334 "positive regulation of protein complex
assembly" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0035861 "site of double-strand break" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043531 "ADP
binding" evidence=ISO] [GO:0045732 "positive regulation of protein
catabolic process" evidence=ISO] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0070842 "aggresome assembly"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:99919 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 GO:GO:0031334 GO:GO:0051260 GO:GO:0016887
GO:GO:0016567 GO:GO:0008289 GO:GO:0006919 GO:GO:0030433
GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279
GO:GO:0031593 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 GeneTree:ENSGT00700000104534 EMBL:AL672276
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 PDB:2PJH PDBsum:2PJH
PDB:1S3S PDBsum:1S3S HOVERGEN:HBG001226 CTD:7415 OrthoDB:EOG45TCMK
ChiTaRS:VCP EMBL:Z14044 EMBL:AK028264 EMBL:AK030751 EMBL:AK149931
EMBL:AK151109 EMBL:AK151418 EMBL:AK153249 EMBL:AK159177
EMBL:AK159509 EMBL:AK167794 EMBL:AK169140 EMBL:BC043053
EMBL:BC049114 IPI:IPI00622235 PIR:S25197 RefSeq:NP_033529.3
UniGene:Mm.245976 PDB:1E32 PDB:1R7R PDB:3CF0 PDB:3CF1 PDB:3CF2
PDB:3CF3 PDBsum:1E32 PDBsum:1R7R PDBsum:3CF0 PDBsum:3CF1
PDBsum:3CF2 PDBsum:3CF3 DisProt:DP00435 ProteinModelPortal:Q01853
SMR:Q01853 DIP:DIP-29796N IntAct:Q01853 MINT:MINT-220770
STRING:Q01853 PhosphoSite:Q01853 REPRODUCTION-2DPAGE:Q01853
UCD-2DPAGE:Q01853 PaxDb:Q01853 PRIDE:Q01853
Ensembl:ENSMUST00000030164 GeneID:269523 KEGG:mmu:269523
UCSC:uc008sor.2 InParanoid:Q01853 BindingDB:Q01853
EvolutionaryTrace:Q01853 NextBio:392876 Bgee:Q01853 CleanEx:MM_VCP
Genevestigator:Q01853 GermOnline:ENSMUSG00000028452 Uniprot:Q01853
Length = 806
Score = 388 (141.6 bits), Expect = 9.8e-33, P = 9.8e-33
Identities = 84/201 (41%), Positives = 121/201 (60%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKA+A E NF SI + + ++ G + VR ++ +A+ AP V+F DELD++
Sbjct: 524 KTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIA 583
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+ RG G GG D +NQ+L +DG + NV I +TNRPDI+DPA++RPGR D+ I
Sbjct: 584 KARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLI 643
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG- 620
+IP P R+ ILK + RK P+A DVD +A MT+G GA+L I + A +R+
Sbjct: 644 YIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESI 703
Query: 621 RTEITTDDLLQ----AAQIEE 637
+EI + Q A ++EE
Sbjct: 704 ESEIRRERERQTNPSAMEVEE 724
Score = 386 (140.9 bits), Expect = 1.6e-32, P = 1.6e-32
Identities = 104/274 (37%), Positives = 156/274 (56%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTL+A+AVA E G FF I+ + + G S +R ++EA+ NAP+++FIDELDA+
Sbjct: 251 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIA 310
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R K G ER ++QLL +DG + R +VI +A+TNRP+ +DPAL R GRFDR++
Sbjct: 311 PKRE--KTHGEVER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREV 367
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
I P GR+EIL++H + +ADDVD VA+ T G VGA+LA + AA+ +R
Sbjct: 368 DIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKM 427
Query: 622 TEITTDDLLQAAQIEER---GMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEFVT 678
I +D A++ M D + S++ A+ E + V V + D+ +E V
Sbjct: 428 DLIDLEDETIDAEVMNSLAVTMDDFRWALSQS-NPSALRETVVEVPQVTWEDIGGLEDVK 486
Query: 679 IAPRAGRELGYVRMKMDHM-KF-KEGMLSRQSLL 710
R +EL V+ ++H KF K GM + +L
Sbjct: 487 ---RELQEL--VQYPVEHPDKFLKFGMTPSKGVL 515
>RGD|621595 [details] [associations]
symbol:Vcp "valosin-containing protein" species:10116 "Rattus
norvegicus" [GO:0000502 "proteasome complex" evidence=IEA;ISO]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO;ISS] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0018279 "protein N-linked glycosylation via asparagine"
evidence=ISO;ISS] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0019985 "translesion synthesis"
evidence=ISO;ISS] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISO;ISS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA;ISO] [GO:0031334 "positive
regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0031593 "polyubiquitin binding" evidence=IEA;ISO] [GO:0032403
"protein complex binding" evidence=IPI] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;IMP] [GO:0035861 "site of double-strand
break" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043531 "ADP binding" evidence=IMP] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=IDA] [GO:0070842
"aggresome assembly" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 RGD:621595 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0031334 GO:GO:0051260 GO:GO:0005102 GO:GO:0016887
GO:GO:0016567 GO:GO:0042802 GO:GO:0008289 GO:GO:0006919
GO:GO:0030433 GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464
GO:GO:0018279 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:U11760 EMBL:BC060518
IPI:IPI00212014 PIR:A55190 RefSeq:NP_446316.1 UniGene:Rn.98891
ProteinModelPortal:P46462 SMR:P46462 IntAct:P46462
MINT:MINT-1954391 STRING:P46462 PhosphoSite:P46462
World-2DPAGE:0004:P46462 PRIDE:P46462 Ensembl:ENSRNOT00000046102
GeneID:116643 KEGG:rno:116643 UCSC:RGD:621595 InParanoid:P46462
NextBio:619375 Genevestigator:P46462 GermOnline:ENSRNOG00000034242
Uniprot:P46462
Length = 806
Score = 388 (141.6 bits), Expect = 9.8e-33, P = 9.8e-33
Identities = 84/201 (41%), Positives = 121/201 (60%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKA+A E NF SI + + ++ G + VR ++ +A+ AP V+F DELD++
Sbjct: 524 KTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIA 583
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+ RG G GG D +NQ+L +DG + NV I +TNRPDI+DPA++RPGR D+ I
Sbjct: 584 KARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLI 643
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG- 620
+IP P R+ ILK + RK P+A DVD +A MT+G GA+L I + A +R+
Sbjct: 644 YIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESI 703
Query: 621 RTEITTDDLLQ----AAQIEE 637
+EI + Q A ++EE
Sbjct: 704 ESEIRRERERQTNPSAMEVEE 724
Score = 386 (140.9 bits), Expect = 1.6e-32, P = 1.6e-32
Identities = 104/274 (37%), Positives = 156/274 (56%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTL+A+AVA E G FF I+ + + G S +R ++EA+ NAP+++FIDELDA+
Sbjct: 251 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIA 310
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R K G ER ++QLL +DG + R +VI +A+TNRP+ +DPAL R GRFDR++
Sbjct: 311 PKRE--KTHGEVER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREV 367
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
I P GR+EIL++H + +ADDVD VA+ T G VGA+LA + AA+ +R
Sbjct: 368 DIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKM 427
Query: 622 TEITTDDLLQAAQIEER---GMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEFVT 678
I +D A++ M D + S++ A+ E + V V + D+ +E V
Sbjct: 428 DLIDLEDETIDAEVMNSLAVTMDDFRWALSQS-NPSALRETVVEVPQVTWEDIGGLEDVK 486
Query: 679 IAPRAGRELGYVRMKMDHM-KF-KEGMLSRQSLL 710
R +EL V+ ++H KF K GM + +L
Sbjct: 487 ---RELQEL--VQYPVEHPDKFLKFGMTPSKGVL 515
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 388 (141.6 bits), Expect = 9.8e-33, P = 9.8e-33
Identities = 84/201 (41%), Positives = 121/201 (60%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKA+A E NF SI + + ++ G + VR ++ +A+ AP V+F DELD++
Sbjct: 524 KTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIA 583
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+ RG G GG D +NQ+L +DG + NV I +TNRPDI+DPA++RPGR D+ I
Sbjct: 584 KARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLI 643
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG- 620
+IP P R+ ILK + RK P+A DVD +A MT+G GA+L I + A +R+
Sbjct: 644 YIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESI 703
Query: 621 RTEITTDDLLQ----AAQIEE 637
+EI + Q A ++EE
Sbjct: 704 ESEIRRERERQTNPSAMEVEE 724
Score = 384 (140.2 bits), Expect = 2.7e-32, P = 2.7e-32
Identities = 104/275 (37%), Positives = 155/275 (56%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTL+A+AVA E G FF I+ + + G S +R ++EA+ NAP+++FIDELDA+
Sbjct: 251 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIA 310
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R K G ER ++QLL +DG + R +VI +A+TNRP+ +DPAL R GRFDR++
Sbjct: 311 PKRE--KTHGEVER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREV 367
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
I P GR+EIL++H + +ADDVD VA+ T G VGA+LA + AA+ +R
Sbjct: 368 DIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKM 427
Query: 622 TEITTDDLLQAAQIEER---GMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEFVT 678
I +D A++ M D + S++ A+ E + V V + D+ +E V
Sbjct: 428 DLIDLEDETIDAEVMNSLAVTMDDFRWALSQS-NPSALRETVVEVPQVTWEDIGGLEDVK 486
Query: 679 IAPRAGREL-GYVRMKMDHM-KF-KEGMLSRQSLL 710
REL V+ ++H KF K GM + +L
Sbjct: 487 ------RELQDLVQYPVEHPDKFLKFGMTPSKGVL 515
>UNIPROTKB|E2RLQ9 [details] [associations]
symbol:VCP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 EMBL:AAEX03007949 Ensembl:ENSCAFT00000003151
NextBio:20856352 Uniprot:E2RLQ9
Length = 822
Score = 388 (141.6 bits), Expect = 1.0e-32, P = 1.0e-32
Identities = 84/201 (41%), Positives = 121/201 (60%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKA+A E NF SI + + ++ G + VR ++ +A+ AP V+F DELD++
Sbjct: 540 KTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIA 599
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+ RG G GG D +NQ+L +DG + NV I +TNRPDI+DPA++RPGR D+ I
Sbjct: 600 KARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLI 659
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG- 620
+IP P R+ ILK + RK P+A DVD +A MT+G GA+L I + A +R+
Sbjct: 660 YIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESI 719
Query: 621 RTEITTDDLLQ----AAQIEE 637
+EI + Q A ++EE
Sbjct: 720 ESEIRRERERQTNPSAMEVEE 740
Score = 386 (140.9 bits), Expect = 1.7e-32, P = 1.7e-32
Identities = 104/274 (37%), Positives = 156/274 (56%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTL+A+AVA E G FF I+ + + G S +R ++EA+ NAP+++FIDELDA+
Sbjct: 267 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIA 326
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R K G ER ++QLL +DG + R +VI +A+TNRP+ +DPAL R GRFDR++
Sbjct: 327 PKRE--KTHGEVER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREV 383
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
I P GR+EIL++H + +ADDVD VA+ T G VGA+LA + AA+ +R
Sbjct: 384 DIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKM 443
Query: 622 TEITTDDLLQAAQIEER---GMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEFVT 678
I +D A++ M D + S++ A+ E + V V + D+ +E V
Sbjct: 444 DLIDLEDETIDAEVMNSLAVTMDDFRWALSQS-NPSALRETVVEVPQVTWEDIGGLEDVK 502
Query: 679 IAPRAGRELGYVRMKMDHM-KF-KEGMLSRQSLL 710
R +EL V+ ++H KF K GM + +L
Sbjct: 503 ---RELQEL--VQYPVEHPDKFLKFGMTPSKGVL 531
>UNIPROTKB|E1BTS8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00700000104534 EMBL:AADN02060646 EMBL:AADN02060647
EMBL:AADN02060648 EMBL:AADN02060649 EMBL:AADN02060650
EMBL:AADN02060651 EMBL:AADN02060652 EMBL:AADN02060653
IPI:IPI00823321 Ensembl:ENSGALT00000039430 ArrayExpress:E1BTS8
Uniprot:E1BTS8
Length = 804
Score = 387 (141.3 bits), Expect = 1.2e-32, P = 1.2e-32
Identities = 84/201 (41%), Positives = 121/201 (60%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKA+A E NF SI + + ++ G + VR ++ +A+ AP V+F DELD++
Sbjct: 522 KTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIA 581
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+ RG G GG D +NQ+L +DG + NV I +TNRPDI+DPA++RPGR D+ I
Sbjct: 582 KARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLI 641
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG- 620
+IP P R+ ILK + RK P+A DVD +A MT+G GA+L I + A +R+
Sbjct: 642 YIPLPDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESI 701
Query: 621 RTEITTDDLLQ----AAQIEE 637
+EI + Q A ++EE
Sbjct: 702 ESEIRRERERQTNPSAMEVEE 722
Score = 293 (108.2 bits), Expect = 2.7e-22, P = 2.7e-22
Identities = 91/274 (33%), Positives = 138/274 (50%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTL+A+AVA E G FF I+ + + G G S R A + D
Sbjct: 251 KTLIARAVANETGAFFFLINGPEIMSKLAGEGESACRKKISPAPPPLKTAGIFKSDDCFP 310
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+ + G+ ++QLL +DG + R +VI +A+TNRP+ +DPAL R GRFDR++
Sbjct: 311 SPQ-----THGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREV 365
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
I P GR+EIL++H + +ADDVD VA+ T G VGA+LA + AA+ +R
Sbjct: 366 DIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKM 425
Query: 622 TEITTDDLLQAAQIEER---GMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEFVT 678
I +D A++ M D + S++ A+ E + V V + D+ +E V
Sbjct: 426 DLIDLEDETIDAEVMNSLAVTMDDFRWALSQS-NPSALRETVVEVPQVTWEDIGGLEDVK 484
Query: 679 IAPRAGRELGYVRMKMDHM-KF-KEGMLSRQSLL 710
R +EL V+ ++H KF K GM + +L
Sbjct: 485 ---RELQEL--VQYPVEHPDKFLKFGMTPSKGVL 513
>UNIPROTKB|P23787 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0035101 "FACT
complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
Length = 805
Score = 387 (141.3 bits), Expect = 1.3e-32, P = 1.3e-32
Identities = 79/178 (44%), Positives = 111/178 (62%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKA+A E NF SI + + ++ G + VR ++ +A+ AP V+F DELD++
Sbjct: 524 KTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIA 583
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+ RG G GG D +NQ+L +DG + NV I +TNRPDI+DPA++RPGR D+ I
Sbjct: 584 KARGGNIGDGGGAADRVINQILTEMDGMSIKKNVFIIGATNRPDIIDPAILRPGRLDQLI 643
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRD 619
+IP P RM ILK + RK P+A DVD +A MT+G GA+L I + A +R+
Sbjct: 644 YIPLPDEKSRMAILKANLRKSPVAKDVDVDFLAKMTNGFSGADLTEICQRACKLAIRE 701
Score = 382 (139.5 bits), Expect = 4.5e-32, P = 4.5e-32
Identities = 103/274 (37%), Positives = 156/274 (56%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTL+A+AVA E G FF I+ + + G S +R ++EA+ NAP+++FIDELDA+
Sbjct: 251 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIA 310
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R K G ER ++QLL +DG + R +VI +A+TNRP+ +DPAL R GRFDR++
Sbjct: 311 PKRE--KTHGEVER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREV 367
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
I P GR+EIL++H + ++DDVD VA+ T G VGA+LA + AA+ +R
Sbjct: 368 DIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKM 427
Query: 622 TEITTDDLLQAAQIEER---GMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEFVT 678
I +D A++ M D + S++ A+ E + V V + D+ +E V
Sbjct: 428 DLIDLEDETIDAEVMNSLAVTMDDFRWALSQS-NPSALRETVVEVPQVTWEDIGGLEDVK 486
Query: 679 IAPRAGRELGYVRMKMDHM-KF-KEGMLSRQSLL 710
R +EL V+ ++H KF K GM + +L
Sbjct: 487 ---RELQEL--VQYPVEHPDKFLKFGMTPSKGVL 515
>UNIPROTKB|F1P4V8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:AADN02060646 EMBL:AADN02060647 EMBL:AADN02060648
EMBL:AADN02060649 EMBL:AADN02060650 EMBL:AADN02060651
EMBL:AADN02060652 EMBL:AADN02060653 IPI:IPI00585183
Ensembl:ENSGALT00000003093 ArrayExpress:F1P4V8 Uniprot:F1P4V8
Length = 810
Score = 387 (141.3 bits), Expect = 1.3e-32, P = 1.3e-32
Identities = 84/201 (41%), Positives = 121/201 (60%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKA+A E NF SI + + ++ G + VR ++ +A+ AP V+F DELD++
Sbjct: 528 KTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIA 587
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+ RG G GG D +NQ+L +DG + NV I +TNRPDI+DPA++RPGR D+ I
Sbjct: 588 KARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLI 647
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG- 620
+IP P R+ ILK + RK P+A DVD +A MT+G GA+L I + A +R+
Sbjct: 648 YIPLPDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESI 707
Query: 621 RTEITTDDLLQ----AAQIEE 637
+EI + Q A ++EE
Sbjct: 708 ESEIRRERERQTNPSAMEVEE 728
Score = 371 (135.7 bits), Expect = 7.5e-31, P = 7.5e-31
Identities = 99/275 (36%), Positives = 153/275 (55%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTL+A+AVA E G FF I+ + + G S +R ++E + NAP+++FIDELDA+
Sbjct: 251 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEETEKNAPAIIFIDELDAIA 310
Query: 502 RERGLIKG-SGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRK 560
+ + G+ ++QLL +DG + R +VI +A+TNRP+ +DPAL R GRFDR+
Sbjct: 311 SDDCFPSPQTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDRE 370
Query: 561 IFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG 620
+ I P GR+EIL++H + +ADDVD VA+ T G VGA+LA + AA+ +R
Sbjct: 371 VDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKK 430
Query: 621 RTEITTDDLLQAAQIEER---GMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEFV 677
I +D A++ M D + S++ A+ E + V V + D+ +E V
Sbjct: 431 MDLIDLEDETIDAEVMNSLAVTMDDFRWALSQS-NPSALRETVVEVPQVTWEDIGGLEDV 489
Query: 678 TIAPRAGRELGYVRMKMDHM-KF-KEGMLSRQSLL 710
R +EL V+ ++H KF K GM + +L
Sbjct: 490 K---RELQEL--VQYPVEHPDKFLKFGMTPSKGVL 519
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 386 (140.9 bits), Expect = 1.6e-32, P = 1.6e-32
Identities = 84/201 (41%), Positives = 120/201 (59%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKA+A E NF SI + + ++ G + VR ++ +A+ AP V+F DELD++
Sbjct: 524 KTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIA 583
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+ RG G GG D +NQ+L +DG + NV I +TNRPDI+DPA++RPGR D+ I
Sbjct: 584 KARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLI 643
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG- 620
+IP P R+ ILK + RK P+A DVD +A MT+G GA+L I + A +R+
Sbjct: 644 YIPLPDEKSRIAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESI 703
Query: 621 RTEITTDDLLQ----AAQIEE 637
EI + Q A ++EE
Sbjct: 704 ENEIRRERERQTNPSAMEVEE 724
Score = 382 (139.5 bits), Expect = 4.5e-32, P = 4.5e-32
Identities = 103/274 (37%), Positives = 156/274 (56%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTL+A+AVA E G FF I+ + + G S +R ++EA+ NAP+++FIDELDA+
Sbjct: 251 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIA 310
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R K G ER ++QLL +DG + R +VI +A+TNRP+ +DPAL R GRFDR++
Sbjct: 311 PKRE--KTHGEVER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREV 367
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
I P GR+EIL++H + ++DDVD VA+ T G VGA+LA + AA+ +R
Sbjct: 368 DIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKM 427
Query: 622 TEITTDDLLQAAQIEER---GMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEFVT 678
I +D A++ M D + S++ A+ E + V V + D+ +E V
Sbjct: 428 DLIDLEDETIDAEVMNSLAVTMDDFRWALSQS-NPSALRETVVEVPQVTWEDIGGLEDVK 486
Query: 679 IAPRAGRELGYVRMKMDHM-KF-KEGMLSRQSLL 710
R +EL V+ ++H KF K GM + +L
Sbjct: 487 ---RELQEL--VQYPVEHPDKFLKFGMTPSKGVL 515
>UNIPROTKB|F1SIH8 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:FP102396 Ensembl:ENSSSCT00000005837 ArrayExpress:F1SIH8
Uniprot:F1SIH8
Length = 808
Score = 386 (140.9 bits), Expect = 1.6e-32, P = 1.6e-32
Identities = 104/274 (37%), Positives = 156/274 (56%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTL+A+AVA E G FF I+ + + G S +R ++EA+ NAP+++FIDELDA+
Sbjct: 251 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIA 310
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R K G ER ++QLL +DG + R +VI +A+TNRP+ +DPAL R GRFDR++
Sbjct: 311 PKRE--KTHGEVER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREV 367
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
I P GR+EIL++H + +ADDVD VA+ T G VGA+LA + AA+ +R
Sbjct: 368 DIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKM 427
Query: 622 TEITTDDLLQAAQIEER---GMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEFVT 678
I +D A++ M D + S++ A+ E + V V + D+ +E V
Sbjct: 428 DLIDLEDETIDAEVMNSLAVTMDDFRWALSQS-NPSALRETVVEVPQVTWEDIGGLEDVK 486
Query: 679 IAPRAGRELGYVRMKMDHM-KF-KEGMLSRQSLL 710
R +EL V+ ++H KF K GM + +L
Sbjct: 487 ---RELQEL--VQYPVEHPDKFLKFGMTPSKGVL 515
Score = 377 (137.8 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 84/203 (41%), Positives = 121/203 (59%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKA+A E NF SI + + ++ G + VR ++ +A+ AP V+F DELD++
Sbjct: 524 KTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIA 583
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+ RG G GG D +NQ+L +DG + NV I +TNRPDI+DPA++RPGR D+ I
Sbjct: 584 KARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLI 643
Query: 562 FIPKPGLIGRMEILKVHARKKPMAD--DVDYLAVASMTDGMVGAELANIVEVAAINMMRD 619
+IP P R+ ILK + RK P+A DVD +A MT+G GA+L I + A +R+
Sbjct: 644 YIPLPDEKSRVAILKANLRKSPVAKAGDVDLEFLAKMTNGFSGADLTEICQRACKLAIRE 703
Query: 620 G-RTEITTDDLLQ----AAQIEE 637
+EI + Q A ++EE
Sbjct: 704 SIESEIRRERERQTNPSAMEVEE 726
>WB|WBGene00004502 [details] [associations]
symbol:rpt-2 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0000003 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER EMBL:FO080494 PIR:T31800
RefSeq:NP_504558.1 ProteinModelPortal:O16368 SMR:O16368
IntAct:O16368 MINT:MINT-210699 STRING:O16368 PaxDb:O16368
PRIDE:O16368 EnsemblMetazoa:F29G9.5.1 EnsemblMetazoa:F29G9.5.2
GeneID:178988 KEGG:cel:CELE_F29G9.5 UCSC:F29G9.5 CTD:178988
WormBase:F29G9.5 GeneTree:ENSGT00550000074818 InParanoid:O16368
NextBio:903424 Uniprot:O16368
Length = 443
Score = 363 (132.8 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 83/245 (33%), Positives = 134/245 (54%)
Query: 407 QYLERGVDVKFS--DMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQ 464
Q ++ V++ + + Y G+R KTLLAKAVA + F I S+
Sbjct: 198 QEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAKAVANQTSATFLRIVGSE 257
Query: 465 FVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLV 524
++ Y+G G VR L++ A++NAPS+VFIDE+DAVG +R G +E T+ +LL
Sbjct: 258 LIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLN 317
Query: 525 CLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPM 584
LDGF+ RG+V + +TNR + LDPAL+RPGR DRKI P P + I ++H + +
Sbjct: 318 QLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTL 377
Query: 585 ADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRK 644
+V+ + D + GA++ + A + +R+ R +T +D ++ +E + +K
Sbjct: 378 GKEVNLEEFITAKDELSGADIKAMCTEAGLLALRERRMRVTMEDFQKS---KENVLYRKK 434
Query: 645 ERSSE 649
E + E
Sbjct: 435 EGAPE 439
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 363 (132.8 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 85/232 (36%), Positives = 130/232 (56%)
Query: 403 KGLPQYLERGVDVKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISA 462
K + + +E + VK +++ G+ KTLLA+AVA F +S
Sbjct: 185 KEIKEVIE--LPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 242
Query: 463 SQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS-GGQ-ERDATLN 520
S+ V+ ++G GA VR L+ A+++APS++F+DE+D++G R ++GS GG E T+
Sbjct: 243 SELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR--VEGSRGGDSEVQRTML 300
Query: 521 QLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHAR 580
+LL LDGFE N+ I +TNR DILD AL+RPGR DRKI P P R +ILK+H+R
Sbjct: 301 ELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPAPDEKARAQILKIHSR 360
Query: 581 KKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA 632
K + + +A G GAE+ ++ A + +R+ R +T +D A
Sbjct: 361 KMNLMRGIRMDKIAEQIPGASGAEVKSVCTEAGMFALRERRIHVTQEDFEMA 412
>FB|FBgn0016983 [details] [associations]
symbol:smid "smallminded" species:7227 "Drosophila
melanogaster" [GO:0016887 "ATPase activity" evidence=ISS;NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0022008 GO:GO:0016887 HSSP:Q01853
KO:K14571 GeneTree:ENSGT00570000079239 UniGene:Dm.875 GeneID:38824
KEGG:dme:Dmel_CG8571 CTD:38824 FlyBase:FBgn0016983 GenomeRNAi:38824
NextBio:810567 RefSeq:NP_523959.2 ProteinModelPortal:Q9VS62
SMR:Q9VS62 IntAct:Q9VS62 MINT:MINT-754496 STRING:Q9VS62
PRIDE:Q9VS62 EnsemblMetazoa:FBtr0076851 UCSC:CG8571-RA
InParanoid:Q9VS62 OMA:EFDSLCP PhylomeDB:Q9VS62 ArrayExpress:Q9VS62
Bgee:Q9VS62 Uniprot:Q9VS62
Length = 944
Score = 387 (141.3 bits), Expect = 1.9e-32, P = 1.9e-32
Identities = 93/264 (35%), Positives = 144/264 (54%)
Query: 415 VKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGA 474
VK+ +M R G+ KTLLAKA+A EAG+NF S+ + + +YVG
Sbjct: 682 VKYPEMLERLGLTAPSGVLLCGPPGCGKTLLAKAIANEAGINFISVKGPELMNMYVGESE 741
Query: 475 SRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGN 534
VR+ +Q A+++AP V+F DE D++ +R G G +NQLL +DG E R
Sbjct: 742 RAVRACFQRARNSAPCVIFFDEFDSLCPKRS-DGGDGNNSGTRIVNQLLTEMDGVEERKG 800
Query: 535 VITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHAR--KKP-MADDVDYL 591
V +A+TNRPDI+DPA++RPGR D +++ P R EILK + K+P +ADDVD
Sbjct: 801 VYILAATNRPDIIDPAILRPGRLDTILYVGFPEQSERTEILKATTKNGKRPVLADDVDLD 860
Query: 592 AVASMTDGMVGAELANIVEVAAINMMRDGRTEITT--DDLLQAAQIEERGMLDRKERSSE 649
+A+ T+G GA+LA +V+ A++ +R T DDL +Q + + + +E
Sbjct: 861 EIAAQTEGYTGADLAGLVKQASMFSLRQSLNNGDTNLDDLCVRSQHFQEALQQLRPSVNE 920
Query: 650 TWRQVAINEAAMAVVAVNFPDLKN 673
R++ ++ + A P L +
Sbjct: 921 QDRKI-YDKLRLKYAAPRVPTLND 943
Score = 260 (96.6 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 69/212 (32%), Positives = 109/212 (51%)
Query: 405 LPQYLERGVDVKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQ 464
L + E + +K + Y + G+ KT LA+A++G+ + I A++
Sbjct: 260 LKELCEMLIHIKSPEFYFQLGLLPSRGLLLHGPPGCGKTFLARAISGQLKMPLMEIPATE 319
Query: 465 FVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLV 524
+ G R+R ++ +A +P V+FIDE+DA+G R S ER ++QL+
Sbjct: 320 LIGGISGESEERIREVFDQAIGYSPCVLFIDEIDAIGGNRQW--ASKDMER-RIVSQLIS 376
Query: 525 CLDGFEGR--G-NVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARK 581
LD + G +V+ IA+T RPD+LDP L R GRFD +I I P R EIL++
Sbjct: 377 SLDNLKANEFGQSVVVIAATTRPDVLDPGLRRIGRFDHEIAIHIPSRKERREILRIQCEG 436
Query: 582 KPMADDVDYLAVASMTDGMVGAELANIVEVAA 613
+ ++Y +A +T G VGA+L +V AA
Sbjct: 437 LSVDPKLNYDKIAELTPGYVGADLMALVSRAA 468
Score = 41 (19.5 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 657 NEAAMAVVAVNFPDLKNIEFVTIAPRAGR 685
NEA + ++V P+L N+ +V + RA R
Sbjct: 718 NEAGINFISVKGPELMNM-YVGESERAVR 745
>DICTYBASE|DDB_G0288065 [details] [associations]
symbol:cdcD "CDC48 family AAA ATPase" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
dictyBase:DDB_G0288065 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005615 GO:GO:0045335 GO:GO:0009617 GO:GO:0051301
GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0007049 GO:GO:0030433
HSSP:Q01853 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AAFI02000109 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
ProtClustDB:CLSZ2429060 EMBL:U83085 RefSeq:XP_636910.1
ProteinModelPortal:P90532 SMR:P90532 STRING:P90532 PRIDE:P90532
EnsemblProtists:DDB0191154 GeneID:8626465 KEGG:ddi:DDB_G0288065
InParanoid:P90532 Uniprot:P90532
Length = 793
Score = 384 (140.2 bits), Expect = 2.7e-32, Sum P(2) = 2.7e-32
Identities = 83/219 (37%), Positives = 122/219 (55%)
Query: 403 KGLPQYLERGVD--VKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSI 460
+G+ + L V V+ + +R+ G++ KTLLAKA+A E NF SI
Sbjct: 481 EGVKRELRETVQYPVEHPEKFRKFGMQPSKGVLFYGPPGCGKTLLAKAIANECQANFISI 540
Query: 461 SASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLN 520
+ + ++ G + VR L+ +A+ AP V+F DELD++ R RG +G G D +N
Sbjct: 541 KGPELLTMWFGESEANVRELFDKARQAAPCVLFFDELDSIARSRGSSQGDAGGAGDRVIN 600
Query: 521 QLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHAR 580
Q+L +DG + NV I +TNRPDI+DPA++RPGR D+ I+IP P L R+ ILK
Sbjct: 601 QILTEMDGMNAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDLPSRVAILKACLN 660
Query: 581 KKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRD 619
K P+A DVD + T G GA+L I + A +R+
Sbjct: 661 KSPVAKDVDLEFLGQKTQGFSGADLTEICQRACKLAIRE 699
Score = 379 (138.5 bits), Expect = 9.3e-32, P = 9.3e-32
Identities = 103/318 (32%), Positives = 173/318 (54%)
Query: 397 VRRAYGKGLPQYLERGVDVKFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVN 456
VR+ G+ + + +E + ++ +++ GV+ KT++A+AVA E G
Sbjct: 207 VRKQLGQ-IRELVE--LPLRHPQLFKNIGVKPPKGILLYGPPGCGKTMIARAVANETGAF 263
Query: 457 FFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERD 516
FF I+ + + G S +R ++EA+ NAPS++FIDE+D++ +R K G ER
Sbjct: 264 FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKRE--KTQGEVER- 320
Query: 517 ATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILK 576
++QLL +DG + R +VI + +TNRP+ +DPAL R GRFDR+I I P GR+EI++
Sbjct: 321 RIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDITIPDATGRLEIMR 380
Query: 577 VHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQI- 635
+H + + + VD AVA+ T G VGA+LA + +A+ +R+ I +D +A+I
Sbjct: 381 IHTKNMKLDETVDLEAVANETHGYVGADLAALCTESALQCIREKMDVIDLEDETISAEIL 440
Query: 636 EERGMLDRKERSSETWRQV-AINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKM 694
E + R++ T A+ E + V + D+ +E V R RE V+ +
Sbjct: 441 ESMSVTQDHFRTALTLSNPSALRETVVEVPTTTWEDIGGLEGVK---RELRET--VQYPV 495
Query: 695 DHM-KFKE-GMLSRQSLL 710
+H KF++ GM + +L
Sbjct: 496 EHPEKFRKFGMQPSKGVL 513
Score = 46 (21.3 bits), Expect = 2.7e-32, Sum P(2) = 2.7e-32
Identities = 13/48 (27%), Positives = 20/48 (41%)
Query: 623 EITTDDLLQAAQIEERGMLDRKERSSETWRQVAINEAAMAVVAVNFPD 670
EIT D +A + R + D R E++ Q + + FPD
Sbjct: 729 EITRDHFQEAMRSARRSVSDNDIRKYESFAQTLVQSRGLGN-NFKFPD 775
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 383 (139.9 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 96/269 (35%), Positives = 155/269 (57%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTL+A+AVA E G FF I+ + + G S +R ++EA+ N+P+++FIDE+D++
Sbjct: 272 KTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIA 331
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R K +G ER ++QLL +DG + R NV+ +A+TNRP+ +DPAL R GRFDR++
Sbjct: 332 PKRE--KTNGEVER-RVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREV 388
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
I P GR+EIL +H + + +DVD +A+ T G VG++LA++ AA+ +R+
Sbjct: 389 DIGIPDPTGRLEILSIHTKNMKLGEDVDLETIAAETHGYVGSDLASLCSEAAMQQIREKM 448
Query: 622 TEITTD-DLLQAAQIEERGM-LDRKERSSETWRQVAINEAAMAVVA-VNFPDLKNIEFVT 678
I D D + A ++ G+ ++ + A+ E A+ V V + D+ +E V
Sbjct: 449 DLIDLDEDTIDAEVLDSLGVTMENFRYALGVSNPSALREVAVVEVPNVRWEDIGGLEEVK 508
Query: 679 IAPRAGREL-GYVRMKMDHM-KFKEGMLS 705
REL V+ +DH KF++ LS
Sbjct: 509 ------RELIESVQYPVDHPEKFQKFGLS 531
Score = 373 (136.4 bits), Expect = 4.7e-31, P = 4.7e-31
Identities = 82/205 (40%), Positives = 116/205 (56%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KT+LAKAVA E NF S+ + + ++ G S +R ++ +A+ AP VVF+DELD++
Sbjct: 546 KTMLAKAVANECAANFISVKGPELLSMWFGESESNIRDIFDKARAAAPCVVFLDELDSIA 605
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+ RG G G D +NQLL +DG + NV I +TNRP+ LD ALVRPGR D +
Sbjct: 606 KSRGGSVGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDAALVRPGRLDTLV 665
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG- 620
++P P R ILK RK P+A DVD +AS T G GA+L + + A +++
Sbjct: 666 YVPLPDQASREGILKAQLRKTPVASDVDIEFIASKTHGFSGADLGFVTQRAVKLAIKESI 725
Query: 621 RTEITTDDLLQAAQIEERGMLDRKE 645
EI +AA E+ M D +E
Sbjct: 726 SAEIERQKQREAAG-EDVKMEDEEE 749
>DICTYBASE|DDB_G0284415 [details] [associations]
symbol:psmC3 "26S proteasome ATPase 3 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284415 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GenomeReviews:CM000153_GR GO:GO:0030163 GO:GO:0000502
HSSP:Q01853 GO:GO:0017111 EMBL:AAFI02000064 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
RefSeq:XP_638617.1 ProteinModelPortal:Q54PN7 STRING:Q54PN7
PRIDE:Q54PN7 EnsemblProtists:DDB0232967 GeneID:8624588
KEGG:ddi:DDB_G0284415 InParanoid:Q54PN7 OMA:GALMYGP
ProtClustDB:CLSZ2433711 Uniprot:Q54PN7
Length = 421
Score = 360 (131.8 bits), Expect = 3.8e-32, P = 3.8e-32
Identities = 79/208 (37%), Positives = 127/208 (61%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+A A + + ++ Q V++++G GA VR + AK+ P+++FIDELDA+G
Sbjct: 215 KTLLARACAAQTNSTYLKLAGPQLVQMFIGDGAKLVRDAFALAKEKGPTIIFIDELDAIG 274
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R + SG +E T+ +LL LDGF N+ IA+TNR DILDPAL+R GR DRKI
Sbjct: 275 TKRFDSEVSGDREVQRTMLELLNQLDGFSSDANIKVIAATNRIDILDPALLRSGRLDRKI 334
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
P P R IL++H+RK ++ DV++ +A ++ GA+L + A + +R G
Sbjct: 335 EFPLPNEEARAHILQIHSRKMNVSADVNFDELARSSEDFNGAQLKAVCVEAGMIALRRGG 394
Query: 622 TEITTDDLLQAAQIEERGMLDRKERSSE 649
TE+ +D ++ +E ++ +K+++ E
Sbjct: 395 TELIHNDFVEGC-VE---VMAKKKKTLE 418
>GENEDB_PFALCIPARUM|PF13_0063 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory
subunit 7, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511
GO:GO:0017111 EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0005838 KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177
RefSeq:XP_001349843.2 ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3
MINT:MINT-1698409 PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA
GeneID:814041 KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500
Uniprot:Q8IEK3
Length = 420
Score = 360 (131.8 bits), Expect = 3.8e-32, P = 3.8e-32
Identities = 78/191 (40%), Positives = 109/191 (57%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTL A+A+A F + S+ V+ YVG GA VR L+Q AK ++FIDE+DA+G
Sbjct: 209 KTLTARAIANRTDACFICVIGSELVQKYVGEGARMVRELFQMAKSKKACILFIDEVDAIG 268
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
RG G E T+ +++ LDGF+ RGN+ + +TNRPD LD ALVRPGR DR+I
Sbjct: 269 GSRGDESAHGDHEVQRTMLEIVNQLDGFDNRGNIKVLMATNRPDTLDSALVRPGRIDRRI 328
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
P L GR I K+HA M+ DV + +A + G+++ ++ A + +R R
Sbjct: 329 EFSLPDLEGRTHIFKIHANTMNMSRDVRFELLARLCPNSTGSDIRSVCTEAGMFAIRARR 388
Query: 622 TEITTDDLLQA 632
IT DLL A
Sbjct: 389 KTITEKDLLLA 399
>UNIPROTKB|Q8IEK3 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory subunit 7,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 GO:GO:0017111
EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0005838
KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177 RefSeq:XP_001349843.2
ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3 MINT:MINT-1698409
PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA GeneID:814041
KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500 Uniprot:Q8IEK3
Length = 420
Score = 360 (131.8 bits), Expect = 3.8e-32, P = 3.8e-32
Identities = 78/191 (40%), Positives = 109/191 (57%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTL A+A+A F + S+ V+ YVG GA VR L+Q AK ++FIDE+DA+G
Sbjct: 209 KTLTARAIANRTDACFICVIGSELVQKYVGEGARMVRELFQMAKSKKACILFIDEVDAIG 268
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
RG G E T+ +++ LDGF+ RGN+ + +TNRPD LD ALVRPGR DR+I
Sbjct: 269 GSRGDESAHGDHEVQRTMLEIVNQLDGFDNRGNIKVLMATNRPDTLDSALVRPGRIDRRI 328
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
P L GR I K+HA M+ DV + +A + G+++ ++ A + +R R
Sbjct: 329 EFSLPDLEGRTHIFKIHANTMNMSRDVRFELLARLCPNSTGSDIRSVCTEAGMFAIRARR 388
Query: 622 TEITTDDLLQA 632
IT DLL A
Sbjct: 389 KTITEKDLLLA 399
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 389 (142.0 bits), Expect = 4.9e-32, Sum P(2) = 4.9e-32
Identities = 78/178 (43%), Positives = 119/178 (66%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KT++A+AVA E G FF I+ + + G S +R ++EA+ N+PS++FIDE+D++
Sbjct: 262 KTIMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIA 321
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R K +G ER ++QLL +DG + R NV+ IA+TNRP+ +DPAL R GRFDR++
Sbjct: 322 PKRD--KTNGEVER-RVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREV 378
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRD 619
I P GR+EIL++H + +ADDVD A+AS T G VGA++A++ AA+ +R+
Sbjct: 379 DIGVPDAEGRLEILRIHTKNMKLADDVDLEAIASETHGFVGADIASLCSEAAMQQIRE 436
Score = 375 (137.1 bits), Expect = 2.9e-31, P = 2.9e-31
Identities = 81/233 (34%), Positives = 130/233 (55%)
Query: 419 DMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVR 478
D Y++ G+ KTLLAKAVA E NF S+ + + ++ G S +R
Sbjct: 512 DQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIR 571
Query: 479 SLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITI 538
++ +A+ AP+VVF+DELD++ + RG G G D +NQLL +DG + NV I
Sbjct: 572 DIFDKARAAAPTVVFLDELDSIAKARGGSHGDAGGASDRVVNQLLTEMDGMNAKKNVFVI 631
Query: 539 ASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTD 598
+TNRPD +DPAL+RPGR D+ I++P P R+ IL+ R P+ +D +A +T
Sbjct: 632 GATNRPDQIDPALLRPGRLDQLIYVPLPDEPARLSILQAQLRNTPLEPGLDLNEIAKITH 691
Query: 599 GMVGAELANIVEVAA-------------INMMRDGRTEITTDDL-LQAAQIEE 637
G GA+L+ IV+ +A IN +++ + ++ T+D+ ++ ++EE
Sbjct: 692 GFSGADLSYIVQRSAKFAIKDSIEAQVKINKIKEEKEKVKTEDVDMKVDEVEE 744
Score = 39 (18.8 bits), Expect = 4.9e-32, Sum P(2) = 4.9e-32
Identities = 10/42 (23%), Positives = 21/42 (50%)
Query: 781 ILNLCYERAKEILQRNRNLLD----AVVNELVEKKSLTKQEF 818
I +LC E A + ++ +L+D + E++ +T+ F
Sbjct: 422 IASLCSEAAMQQIREKMDLIDLEEETIDTEVLNSLGVTQDNF 463
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 389 (142.0 bits), Expect = 4.9e-32, Sum P(2) = 4.9e-32
Identities = 78/178 (43%), Positives = 119/178 (66%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KT++A+AVA E G FF I+ + + G S +R ++EA+ N+PS++FIDE+D++
Sbjct: 262 KTIMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIA 321
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R K +G ER ++QLL +DG + R NV+ IA+TNRP+ +DPAL R GRFDR++
Sbjct: 322 PKRD--KTNGEVER-RVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREV 378
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRD 619
I P GR+EIL++H + +ADDVD A+AS T G VGA++A++ AA+ +R+
Sbjct: 379 DIGVPDAEGRLEILRIHTKNMKLADDVDLEAIASETHGFVGADIASLCSEAAMQQIRE 436
Score = 375 (137.1 bits), Expect = 2.9e-31, P = 2.9e-31
Identities = 81/233 (34%), Positives = 130/233 (55%)
Query: 419 DMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVR 478
D Y++ G+ KTLLAKAVA E NF S+ + + ++ G S +R
Sbjct: 512 DQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIR 571
Query: 479 SLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITI 538
++ +A+ AP+VVF+DELD++ + RG G G D +NQLL +DG + NV I
Sbjct: 572 DIFDKARAAAPTVVFLDELDSIAKARGGSHGDAGGASDRVVNQLLTEMDGMNAKKNVFVI 631
Query: 539 ASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTD 598
+TNRPD +DPAL+RPGR D+ I++P P R+ IL+ R P+ +D +A +T
Sbjct: 632 GATNRPDQIDPALLRPGRLDQLIYVPLPDEPARLSILQAQLRNTPLEPGLDLNEIAKITH 691
Query: 599 GMVGAELANIVEVAA-------------INMMRDGRTEITTDDL-LQAAQIEE 637
G GA+L+ IV+ +A IN +++ + ++ T+D+ ++ ++EE
Sbjct: 692 GFSGADLSYIVQRSAKFAIKDSIEAQVKINKIKEEKEKVKTEDVDMKVDEVEE 744
Score = 39 (18.8 bits), Expect = 4.9e-32, Sum P(2) = 4.9e-32
Identities = 10/42 (23%), Positives = 21/42 (50%)
Query: 781 ILNLCYERAKEILQRNRNLLD----AVVNELVEKKSLTKQEF 818
I +LC E A + ++ +L+D + E++ +T+ F
Sbjct: 422 IASLCSEAAMQQIREKMDLIDLEEETIDTEVLNSLGVTQDNF 463
>WB|WBGene00004501 [details] [associations]
symbol:rpt-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0016887 GO:GO:0000502 GO:GO:0006511 EMBL:Z78012
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 PIR:T20152
RefSeq:NP_506005.1 ProteinModelPortal:Q18787 SMR:Q18787
IntAct:Q18787 MINT:MINT-212537 STRING:Q18787 PaxDb:Q18787
PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1 EnsemblMetazoa:C52E4.4.2
GeneID:179641 KEGG:cel:CELE_C52E4.4 UCSC:C52E4.4.1 CTD:179641
WormBase:C52E4.4 InParanoid:Q18787 NextBio:906264 Uniprot:Q18787
Length = 435
Score = 359 (131.4 bits), Expect = 4.9e-32, P = 4.9e-32
Identities = 79/192 (41%), Positives = 111/192 (57%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTL A+AVA F + S+ V+ YVG GA VR L++ A+ ++F DE+DAVG
Sbjct: 224 KTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVG 283
Query: 502 RERGLIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRK 560
R G GG E T+ +L+ LDGF+ RGN+ + +TNRPD LDPAL+RPGR DRK
Sbjct: 284 GAR-FDDGQGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 342
Query: 561 IFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG 620
+ P L GR ILK+HA++ + D+ Y +A + GAE+ ++ A + +R
Sbjct: 343 VEFALPDLAGRAHILKIHAKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIRAR 402
Query: 621 RTEITTDDLLQA 632
R T D L+A
Sbjct: 403 RKVATEKDFLEA 414
>UNIPROTKB|Q18787 [details] [associations]
symbol:rpt-1 "26S protease regulatory subunit 7"
species:6239 "Caenorhabditis elegans" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0016887 GO:GO:0000502
GO:GO:0006511 EMBL:Z78012 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
GeneTree:ENSGT00550000074978 PIR:T20152 RefSeq:NP_506005.1
ProteinModelPortal:Q18787 SMR:Q18787 IntAct:Q18787 MINT:MINT-212537
STRING:Q18787 PaxDb:Q18787 PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1
EnsemblMetazoa:C52E4.4.2 GeneID:179641 KEGG:cel:CELE_C52E4.4
UCSC:C52E4.4.1 CTD:179641 WormBase:C52E4.4 InParanoid:Q18787
NextBio:906264 Uniprot:Q18787
Length = 435
Score = 359 (131.4 bits), Expect = 4.9e-32, P = 4.9e-32
Identities = 79/192 (41%), Positives = 111/192 (57%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTL A+AVA F + S+ V+ YVG GA VR L++ A+ ++F DE+DAVG
Sbjct: 224 KTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVG 283
Query: 502 RERGLIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRK 560
R G GG E T+ +L+ LDGF+ RGN+ + +TNRPD LDPAL+RPGR DRK
Sbjct: 284 GAR-FDDGQGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 342
Query: 561 IFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG 620
+ P L GR ILK+HA++ + D+ Y +A + GAE+ ++ A + +R
Sbjct: 343 VEFALPDLAGRAHILKIHAKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIRAR 402
Query: 621 RTEITTDDLLQA 632
R T D L+A
Sbjct: 403 RKVATEKDFLEA 414
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 381 (139.2 bits), Expect = 6.0e-32, P = 6.0e-32
Identities = 100/274 (36%), Positives = 155/274 (56%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTL+A+AVA E G FF I+ + + G S +R ++EA+ NAPS++FIDE+D++
Sbjct: 255 KTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIA 314
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R K G ER ++QLL +DG + R +VI + +TNRP+ +DPAL R GRFDR+I
Sbjct: 315 PKRE--KTHGEVER-RIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREI 371
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
I P IGR+E+L++H + +A+DVD V+ T G VGA+LA + AA+ +R+
Sbjct: 372 DIGVPDEIGRLEVLRIHTKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAALQCIREKM 431
Query: 622 TEITTDDLLQAAQIEERGML--DRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEFVTI 679
I DD A+I + D + + A+ E + V V++ D+ +E V
Sbjct: 432 DVIDLDDEEIDAEILNSMAVSNDHFQTALGNSNPSALRETVVEVPNVSWEDIGGLENVK- 490
Query: 680 APRAGRELGY-VRMKMDHM-KFKE-GMLSRQSLL 710
REL V+ ++H KF++ GM + +L
Sbjct: 491 -----RELQETVQYPVEHPEKFEKFGMSPSKGVL 519
Score = 375 (137.1 bits), Expect = 2.8e-31, P = 2.8e-31
Identities = 75/169 (44%), Positives = 103/169 (60%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKA+A E NF SI + + ++ G + VR ++ +A+ +AP V+F DELD++
Sbjct: 528 KTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+RG G G D LNQLL +DG + V I +TNRPDI+DPAL+RPGR D+ I
Sbjct: 588 TQRGNSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLI 647
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVE 610
+IP P R +I K RK P+A DVD A+A T G GA++ I +
Sbjct: 648 YIPLPDEESRYQIFKSCLRKSPVAKDVDLRALAKYTQGFSGADITEICQ 696
>TAIR|locus:2103555 [details] [associations]
symbol:CIP111 "Cam interacting protein 111" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IDA;TAS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GO:GO:0016887 GO:GO:0005516 HSSP:Q01853
eggNOG:COG0464 EMBL:AL390921 GO:GO:0009535 HOGENOM:HOG000223224
EMBL:AF217546 EMBL:AF217547 IPI:IPI00534707 PIR:T50927 PIR:T51257
RefSeq:NP_191228.1 UniGene:At.9830 ProteinModelPortal:Q9LET7
SMR:Q9LET7 IntAct:Q9LET7 STRING:Q9LET7 PRIDE:Q9LET7
EnsemblPlants:AT3G56690.1 GeneID:824836 KEGG:ath:AT3G56690
GeneFarm:2042 TAIR:At3g56690 InParanoid:Q9LET7 OMA:SEAKLNF
PhylomeDB:Q9LET7 ProtClustDB:CLSN2684205 Genevestigator:Q9LET7
Uniprot:Q9LET7
Length = 1022
Score = 383 (139.9 bits), Expect = 6.1e-32, P = 6.1e-32
Identities = 93/242 (38%), Positives = 133/242 (54%)
Query: 416 KFSDMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGAS 475
K D ++R G R KTL+A+AVA EA +NF ++ + +VG
Sbjct: 745 KHQDAFKRIGTRPPSGILMFGPPGCSKTLMARAVASEAKLNFLAVKGPELFSKWVGESEK 804
Query: 476 RVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNV 535
VRSL+ +A+ NAPS++F DE+D++ RG + G D ++QLLV LDG R V
Sbjct: 805 AVRSLFAKARANAPSIIFFDEIDSLASIRGK-ENDGVSVSDRVMSQLLVELDGLHQRVGV 863
Query: 536 ITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVAS 595
IA+TNRPD +D AL+RPGRFDR +++ P R ILK+H RK P + D+ +AS
Sbjct: 864 TVIAATNRPDKIDSALLRPGRFDRLLYVGPPNETDREAILKIHLRKIPCSSDICLKELAS 923
Query: 596 MTDGMVGAELANIVEVAAINMMRDG--RTEITTDDLLQA-AQIEERGMLDRKERSSETWR 652
+T G GA+++ I AAI + + EI+ L A +QIE +L K S + R
Sbjct: 924 ITKGYTGADISLICREAAIAALEESLEMEEISMRHLKAAISQIEPTEILSYKALSEKFQR 983
Query: 653 QV 654
V
Sbjct: 984 LV 985
Score = 275 (101.9 bits), Expect = 3.7e-20, P = 3.7e-20
Identities = 77/217 (35%), Positives = 119/217 (54%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KT LA+ A +GVNFFS++ + + Y+G + +++ A + P+VVFID+LDA+
Sbjct: 431 KTSLARTFARHSGVNFFSVNGPEIISQYLGESEKALDEVFRSASNATPAVVFIDDLDAIA 490
Query: 502 RERGLIKGSGGQERDATL-NQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRK 560
R GG+E + LL +DG V+ IA+TNRPD ++PAL RPGR DR+
Sbjct: 491 PARK----EGGEELSQRMVATLLNLMDGISRTDGVVVIAATNRPDSIEPALRRPGRLDRE 546
Query: 561 IFIPKPGLIGRMEILKVHAR--KKPMAD-DVDYLAVASMTDGMVGAELANIV-EVAAINM 616
I I P R +IL + R + +++ V+ LA+A T G VGA+L+ + E A + +
Sbjct: 547 IEIGVPSSTQRSDILHIILRGMRHSLSNIQVEQLAMA--THGFVGADLSALCCEAAFVCL 604
Query: 617 MRDGRTEITTDDL-LQAAQIEERG--MLDRKERSSET 650
R ++ +L L+ A I E M D SS++
Sbjct: 605 RRHLDQSSSSSNLPLEEAPIAESSSNMSDISSDSSDS 641
>CGD|CAL0005689 [details] [associations]
symbol:RPT1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005689 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000078 EMBL:AACQ01000077
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
RefSeq:XP_715876.1 RefSeq:XP_715926.1 ProteinModelPortal:Q5A2A0
STRING:Q5A2A0 GeneID:3642412 GeneID:3642461 KEGG:cal:CaO19.441
KEGG:cal:CaO19.8071 Uniprot:Q5A2A0
Length = 444
Score = 339 (124.4 bits), Expect = 7.3e-32, Sum P(2) = 7.3e-32
Identities = 74/201 (36%), Positives = 112/201 (55%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTL A+AVA F + S+ V+ YVG GA VR L++ A+ ++F DE+DA+G
Sbjct: 233 KTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEVDAIG 292
Query: 502 RERGLIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRK 560
R G+GG E T+ +L+ LDGF+ RGN+ + +TNRP+ LDPAL+RPGR DRK
Sbjct: 293 GAR-FDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRK 351
Query: 561 IFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG 620
+ P L GR I ++H++ + D+ + ++ + GAEL ++ A + +R
Sbjct: 352 VEFSLPDLEGRANIFRIHSKTMSVEKDIRWELISRLCPNATGAELRSVCTEAGMFAIRAR 411
Query: 621 RTEITTDDLLQAAQIEERGML 641
R D L+A +G L
Sbjct: 412 RKVANEKDFLKAVDKVIKGNL 432
Score = 43 (20.2 bits), Expect = 7.3e-32, Sum P(2) = 7.3e-32
Identities = 15/65 (23%), Positives = 26/65 (40%)
Query: 108 EQLKKWSKDLPIVSDRIAYTEIFSLKDEGKLK-HVIKSPSGSLRQKAEPVLVVLEDSRVL 166
+ LK+ KDL + +RI + D G H+ R + E L V ++++
Sbjct: 43 DSLKEIEKDLKTIEERIKTNQGIKESDTGLAPPHLWDVLGDKQRMQEEQSLQVARCTKII 102
Query: 167 RTVLP 171
P
Sbjct: 103 EASQP 107
>ASPGD|ASPL0000034636 [details] [associations]
symbol:AN2917 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001306
EMBL:AACD01000051 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
OrthoDB:EOG4B01XN RefSeq:XP_660521.1 ProteinModelPortal:Q5B963
STRING:Q5B963 EnsemblFungi:CADANIAT00010170 GeneID:2874156
KEGG:ani:AN2917.2 Uniprot:Q5B963
Length = 443
Score = 357 (130.7 bits), Expect = 8.1e-32, P = 8.1e-32
Identities = 82/213 (38%), Positives = 118/213 (55%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTL A+AVA F + S+ V+ YVG GA VR L++ A+ ++F DE+DAVG
Sbjct: 232 KTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVG 291
Query: 502 RERGLIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRK 560
R G+GG E T+ +L+ LDGF+ RGN+ + +TNRP LDPAL+RPGR DRK
Sbjct: 292 GAR-FDDGAGGDNEVQRTMLELITQLDGFDARGNIKVMFATNRPSTLDPALMRPGRIDRK 350
Query: 561 IFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG 620
I P + GR IL++HA+ + D+ + ++ + GAEL ++ A + +R
Sbjct: 351 IEFSLPDVEGRANILRIHAKSMSVERDIRWELISRLCPNATGAELRSVATEAGMFAIRAR 410
Query: 621 RTEITTDDLLQAAQIEERGMLDRKERSSETWRQ 653
R T D L A +G L K S+ T+ Q
Sbjct: 411 RKVATEKDFLAAVDKVIKGNL--KFNSTATYMQ 441
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 379 (138.5 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 97/274 (35%), Positives = 156/274 (56%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTL+A+AVA E G FF I+ + + G S +R ++EA+ NAPS++FIDE+D++
Sbjct: 254 KTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIA 313
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R K +G ER ++QLL +DG + R +VI + +TNRP+ +DPAL R GRFDR+I
Sbjct: 314 PKRE--KTNGEVER-RIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREI 370
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
I P IGR+E+L++H + +A+DVD ++ T G VGA+LA + AA+ +R+
Sbjct: 371 DIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKM 430
Query: 622 TEITT-DDLLQAAQIEERGMLDRKERSS-ETWRQVAINEAAMAVVAVNFPDLKNIEFVTI 679
I DD + A + + + ++ A+ E + V V++ D+ +E V
Sbjct: 431 DVIDLEDDSIDAEILNSMAVTNEHFHTALGNSNPSALRETVVEVPNVSWNDIGGLENVK- 489
Query: 680 APRAGRELGY-VRMKMDHM-KFKE-GMLSRQSLL 710
REL V+ ++H KF++ GM + +L
Sbjct: 490 -----RELQETVQYPVEHPEKFEKFGMSPSKGVL 518
Score = 367 (134.2 bits), Expect = 2.1e-30, P = 2.1e-30
Identities = 76/179 (42%), Positives = 107/179 (59%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKA+A E NF S+ + + ++ G + VR ++ +A+ +AP V+F DELD++
Sbjct: 527 KTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 586
Query: 502 RERGLIKGS-GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRK 560
+RG G GG D LNQLL +DG + V I +TNRPDI+D AL+RPGR D+
Sbjct: 587 TQRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQL 646
Query: 561 IFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRD 619
I+IP P R+ I K RK P+A DVD A+A T G GA++ I + A +R+
Sbjct: 647 IYIPLPDEDSRLNIFKAALRKSPIAKDVDIGALAKYTQGFSGADITEICQRACKYAIRE 705
>TAIR|locus:2831844 [details] [associations]
symbol:AtCDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
Uniprot:Q9LZF6
Length = 810
Score = 379 (138.5 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 97/274 (35%), Positives = 156/274 (56%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTL+A+AVA E G FF I+ + + G S +R ++EA+ NAPS++FIDE+D++
Sbjct: 254 KTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIA 313
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R K +G ER ++QLL +DG + R +VI + +TNRP+ +DPAL R GRFDR+I
Sbjct: 314 PKRE--KTNGEVER-RIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREI 370
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
I P IGR+E+L++H + +A+DVD ++ T G VGA+LA + AA+ +R+
Sbjct: 371 DIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKM 430
Query: 622 TEITT-DDLLQAAQIEERGMLDRKERSS-ETWRQVAINEAAMAVVAVNFPDLKNIEFVTI 679
I DD + A + + + ++ A+ E + V V++ D+ +E V
Sbjct: 431 DVIDLEDDSIDAEILNSMAVSNEHFHTALGNSNPSALRETVVEVPNVSWEDIGGLENVK- 489
Query: 680 APRAGRELGY-VRMKMDHM-KFKE-GMLSRQSLL 710
REL V+ ++H KF++ GM + +L
Sbjct: 490 -----RELQETVQYPVEHPEKFEKFGMSPSKGVL 518
Score = 374 (136.7 bits), Expect = 3.5e-31, P = 3.5e-31
Identities = 75/178 (42%), Positives = 106/178 (59%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKA+A E NF S+ + + ++ G + VR ++ +A+ +AP V+F DELD++
Sbjct: 527 KTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 586
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+RG G G D LNQLL +DG + V I +TNRPDI+D AL+RPGR D+ I
Sbjct: 587 TQRGNSAGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLI 646
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRD 619
+IP P R+ I K RK P+A DVD A+A T G GA++ I + A +R+
Sbjct: 647 YIPLPDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQGFSGADITEICQRACKYAIRE 704
>DICTYBASE|DDB_G0270784 [details] [associations]
symbol:psmC1 "TAT binding protein alpha"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0270784 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0030587 GO:GO:0000910 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 HSSP:Q9WZ49 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03062 OMA:FIRNQER RefSeq:XP_646726.1 ProteinModelPortal:Q55BV5
STRING:Q55BV5 PRIDE:Q55BV5 EnsemblProtists:DDB0232964
GeneID:8617698 KEGG:ddi:DDB_G0270784 ProtClustDB:PTZ00361
Uniprot:Q55BV5
Length = 439
Score = 356 (130.4 bits), Expect = 1.0e-31, P = 1.0e-31
Identities = 78/230 (33%), Positives = 128/230 (55%)
Query: 407 QYLERGVDVKFS--DMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQ 464
Q ++ +++ + ++Y G++ KTLLAKAVA + F + S+
Sbjct: 194 QEMKEAIELPLTHPELYEEIGIKPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSE 253
Query: 465 FVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLV 524
++ Y+G G VR L++ A + APS+VFIDE+DAVG +R + G +E T+ +LL
Sbjct: 254 LIQKYLGDGPKLVRELFRVADECAPSIVFIDEIDAVGTKRYDSQSGGEREIQRTMLELLN 313
Query: 525 CLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPM 584
LDGF+ R +V I +TNR + LDPAL+RPGR DRKI P P + + +I ++H K +
Sbjct: 314 QLDGFDARTDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDIKTKRKIFEIHTAKMNL 373
Query: 585 ADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQ 634
++DV+ D + GA++ I + + +R+ R +T D +A +
Sbjct: 374 SEDVNLEEFVMSKDDLSGADIKAICTESGLLALRERRMRVTHTDFKKAKE 423
>UNIPROTKB|Q5R8D7 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9601 "Pongo abelii" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:CR859816 RefSeq:NP_001126144.1
UniGene:Pab.13078 ProteinModelPortal:Q5R8D7 PRIDE:Q5R8D7
GeneID:100173102 KEGG:pon:100173102 InParanoid:Q5R8D7
Uniprot:Q5R8D7
Length = 433
Score = 356 (130.4 bits), Expect = 1.0e-31, P = 1.0e-31
Identities = 79/192 (41%), Positives = 111/192 (57%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTL A+AVA F + S+ V+ YVG GA VR L++ A+ ++F DE+DA+G
Sbjct: 222 KTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIG 281
Query: 502 RERGLIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRK 560
R G+GG E T+ +L+ LDGF+ RGN+ + +TNRPD LDPAL+RPGR DRK
Sbjct: 282 GAR-FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 340
Query: 561 IFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG 620
I P L GR ILK+HAR + D+ + +A + GAE+ ++ A + +R
Sbjct: 341 IEFSLPDLEGRTHILKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRAR 400
Query: 621 RTEITTDDLLQA 632
R T D L+A
Sbjct: 401 RKIATEKDFLEA 412
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 355 (130.0 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 79/211 (37%), Positives = 120/211 (56%)
Query: 419 DMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVR 478
+ + + G+R KTL+A+A A + F ++ Q V++++G GA VR
Sbjct: 194 EQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVR 253
Query: 479 SLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITI 538
+ AK+ +P ++FIDE+DA+G +R + SG +E T+ +LL LDGF + I
Sbjct: 254 DAFLLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVI 313
Query: 539 ASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTD 598
A+TNR DILDPAL+R GR DRKI P P R IL++H+RK + DV++ +A TD
Sbjct: 314 AATNRADILDPALMRSGRLDRKIEFPHPTEEARGRILQIHSRKMNVNADVNFEELARSTD 373
Query: 599 GMVGAELANI-VEVAAINMMRDGRTEITTDD 628
GA+L + VE + + RD TE+ +D
Sbjct: 374 DFNGAQLKAVCVEAGMLALRRDA-TEVNHED 403
>UNIPROTKB|P46472 [details] [associations]
symbol:psmc2 "26S protease regulatory subunit 7"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:X80157 EMBL:BC054143 PIR:S53709
RefSeq:NP_001084136.1 UniGene:Xl.57157 ProteinModelPortal:P46472
GeneID:399327 KEGG:xla:399327 Xenbase:XB-GENE-1000023
Uniprot:P46472
Length = 433
Score = 353 (129.3 bits), Expect = 2.2e-31, P = 2.2e-31
Identities = 78/192 (40%), Positives = 110/192 (57%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTL A+AVA F + S+ V+ YVG GA VR L++ A+ ++F DE+DA+G
Sbjct: 222 KTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIG 281
Query: 502 RERGLIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRK 560
R G+GG E T+ +L+ LDGF+ RGN+ + +TNRPD LDPAL+RPGR DRK
Sbjct: 282 GAR-FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 340
Query: 561 IFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG 620
I P L GR I K+HAR + D+ + +A + GAE+ ++ A + +R
Sbjct: 341 IEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRAR 400
Query: 621 RTEITTDDLLQA 632
R T D L+A
Sbjct: 401 RKVATEKDFLEA 412
>UNIPROTKB|E1C4V5 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
EMBL:AADN02036894 EMBL:AADN02036895 IPI:IPI00602342
Ensembl:ENSGALT00000013403 ArrayExpress:E1C4V5 Uniprot:E1C4V5
Length = 424
Score = 352 (129.0 bits), Expect = 2.8e-31, P = 2.8e-31
Identities = 78/192 (40%), Positives = 110/192 (57%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTL A+AVA F + S+ V+ YVG GA VR L++ A+ ++F DE+DA+G
Sbjct: 213 KTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIG 272
Query: 502 RERGLIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRK 560
R G+GG E T+ +L+ LDGF+ RGN+ + +TNRPD LDPAL+RPGR DRK
Sbjct: 273 GAR-FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 331
Query: 561 IFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG 620
I P L GR I K+HAR + D+ + +A + GAE+ ++ A + +R
Sbjct: 332 IEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRAR 391
Query: 621 RTEITTDDLLQA 632
R T D L+A
Sbjct: 392 RKIATEKDFLEA 403
>UNIPROTKB|F1NFL8 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 OMA:DIRWELI
GeneTree:ENSGT00550000074978 EMBL:AADN02036894 EMBL:AADN02036895
IPI:IPI00821647 Ensembl:ENSGALT00000039595 ArrayExpress:F1NFL8
Uniprot:F1NFL8
Length = 432
Score = 352 (129.0 bits), Expect = 2.8e-31, P = 2.8e-31
Identities = 78/192 (40%), Positives = 110/192 (57%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTL A+AVA F + S+ V+ YVG GA VR L++ A+ ++F DE+DA+G
Sbjct: 221 KTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIG 280
Query: 502 RERGLIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRK 560
R G+GG E T+ +L+ LDGF+ RGN+ + +TNRPD LDPAL+RPGR DRK
Sbjct: 281 GAR-FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 339
Query: 561 IFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG 620
I P L GR I K+HAR + D+ + +A + GAE+ ++ A + +R
Sbjct: 340 IEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRAR 399
Query: 621 RTEITTDDLLQA 632
R T D L+A
Sbjct: 400 RKIATEKDFLEA 411
>UNIPROTKB|Q5E9F9 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9913 "Bos taurus" [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 HSSP:Q9WZ49 GO:GO:0000932 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 KO:K03061 OMA:DIRWELI
EMBL:BT020961 EMBL:BC102391 IPI:IPI00693210 RefSeq:NP_001015639.1
UniGene:Bt.24017 ProteinModelPortal:Q5E9F9 SMR:Q5E9F9 PRIDE:Q5E9F9
Ensembl:ENSBTAT00000065774 GeneID:530186 KEGG:bta:530186 CTD:5701
GeneTree:ENSGT00550000074978 OrthoDB:EOG4RXZ05 NextBio:20875201
Uniprot:Q5E9F9
Length = 433
Score = 352 (129.0 bits), Expect = 2.8e-31, P = 2.8e-31
Identities = 78/192 (40%), Positives = 110/192 (57%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTL A+AVA F + S+ V+ YVG GA VR L++ A+ ++F DE+DA+G
Sbjct: 222 KTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIG 281
Query: 502 RERGLIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRK 560
R G+GG E T+ +L+ LDGF+ RGN+ + +TNRPD LDPAL+RPGR DRK
Sbjct: 282 GAR-FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 340
Query: 561 IFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG 620
I P L GR I K+HAR + D+ + +A + GAE+ ++ A + +R
Sbjct: 341 IEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRAR 400
Query: 621 RTEITTDDLLQA 632
R T D L+A
Sbjct: 401 RKIATEKDFLEA 412
>UNIPROTKB|F1PPH7 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 KO:K03061
OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978 EMBL:AAEX03011248
RefSeq:XP_533103.3 ProteinModelPortal:F1PPH7
Ensembl:ENSCAFT00000006754 GeneID:475896 KEGG:cfa:475896
Uniprot:F1PPH7
Length = 433
Score = 352 (129.0 bits), Expect = 2.8e-31, P = 2.8e-31
Identities = 78/192 (40%), Positives = 110/192 (57%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTL A+AVA F + S+ V+ YVG GA VR L++ A+ ++F DE+DA+G
Sbjct: 222 KTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIG 281
Query: 502 RERGLIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRK 560
R G+GG E T+ +L+ LDGF+ RGN+ + +TNRPD LDPAL+RPGR DRK
Sbjct: 282 GAR-FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 340
Query: 561 IFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG 620
I P L GR I K+HAR + D+ + +A + GAE+ ++ A + +R
Sbjct: 341 IEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRAR 400
Query: 621 RTEITTDDLLQA 632
R T D L+A
Sbjct: 401 RKIATEKDFLEA 412
>UNIPROTKB|B7Z5E2 [details] [associations]
symbol:PSMC2 "cDNA FLJ52353, highly similar to 26S protease
regulatory subunit 7" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0030163 GO:GO:0017111 GO:GO:0008233 EMBL:AC004668
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 UniGene:Hs.437366
HGNC:HGNC:9548 ChiTaRS:PSMC2 EMBL:AC093701 EMBL:AK298821
IPI:IPI01015219 SMR:B7Z5E2 STRING:B7Z5E2 Ensembl:ENST00000544811
Uniprot:B7Z5E2
Length = 296
Score = 352 (129.0 bits), Expect = 2.8e-31, P = 2.8e-31
Identities = 78/192 (40%), Positives = 110/192 (57%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTL A+AVA F + S+ V+ YVG GA VR L++ A+ ++F DE+DA+G
Sbjct: 85 KTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIG 144
Query: 502 RERGLIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRK 560
R G+GG E T+ +L+ LDGF+ RGN+ + +TNRPD LDPAL+RPGR DRK
Sbjct: 145 GAR-FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 203
Query: 561 IFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG 620
I P L GR I K+HAR + D+ + +A + GAE+ ++ A + +R
Sbjct: 204 IEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRAR 263
Query: 621 RTEITTDDLLQA 632
R T D L+A
Sbjct: 264 RKIATEKDFLEA 275
>UNIPROTKB|P35998 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0016887
GO:GO:0051436 GO:GO:0000932 EMBL:CH471070 GO:GO:0000216
GO:GO:0000209 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
EMBL:CH236947 GO:GO:0006521 Reactome:REACT_383 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI CTD:5701 EMBL:D11094
EMBL:AB075520 EMBL:BC002589 IPI:IPI00021435 PIR:S24353
RefSeq:NP_001191382.1 RefSeq:NP_002794.1 UniGene:Hs.437366
ProteinModelPortal:P35998 SMR:P35998 DIP:DIP-27554N IntAct:P35998
MINT:MINT-1163662 STRING:P35998 PhosphoSite:P35998 DMDM:547930
OGP:P35998 REPRODUCTION-2DPAGE:IPI00021435
REPRODUCTION-2DPAGE:P35998 PaxDb:P35998 PeptideAtlas:P35998
PRIDE:P35998 DNASU:5701 Ensembl:ENST00000292644
Ensembl:ENST00000435765 GeneID:5701 KEGG:hsa:5701 UCSC:uc003vbs.3
GeneCards:GC07P102984 HGNC:HGNC:9548 HPA:HPA019238 MIM:154365
neXtProt:NX_P35998 PharmGKB:PA33893 InParanoid:P35998
PhylomeDB:P35998 ChiTaRS:PSMC2 GenomeRNAi:5701 NextBio:22150
ArrayExpress:P35998 Bgee:P35998 CleanEx:HS_PSMC2
Genevestigator:P35998 GermOnline:ENSG00000161057 Uniprot:P35998
Length = 433
Score = 352 (129.0 bits), Expect = 2.8e-31, P = 2.8e-31
Identities = 78/192 (40%), Positives = 110/192 (57%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTL A+AVA F + S+ V+ YVG GA VR L++ A+ ++F DE+DA+G
Sbjct: 222 KTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIG 281
Query: 502 RERGLIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRK 560
R G+GG E T+ +L+ LDGF+ RGN+ + +TNRPD LDPAL+RPGR DRK
Sbjct: 282 GAR-FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 340
Query: 561 IFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG 620
I P L GR I K+HAR + D+ + +A + GAE+ ++ A + +R
Sbjct: 341 IEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRAR 400
Query: 621 RTEITTDDLLQA 632
R T D L+A
Sbjct: 401 RKIATEKDFLEA 412
>UNIPROTKB|F1SB53 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
OMA:HIFTIHA EMBL:CU570825 Ensembl:ENSSSCT00000016802 Uniprot:F1SB53
Length = 475
Score = 352 (129.0 bits), Expect = 2.8e-31, P = 2.8e-31
Identities = 78/192 (40%), Positives = 110/192 (57%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTL A+AVA F + S+ V+ YVG GA VR L++ A+ ++F DE+DA+G
Sbjct: 264 KTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIG 323
Query: 502 RERGLIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRK 560
R G+GG E T+ +L+ LDGF+ RGN+ + +TNRPD LDPAL+RPGR DRK
Sbjct: 324 GAR-FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 382
Query: 561 IFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG 620
I P L GR I K+HAR + D+ + +A + GAE+ ++ A + +R
Sbjct: 383 IEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRAR 442
Query: 621 RTEITTDDLLQA 632
R T D L+A
Sbjct: 443 RKIATEKDFLEA 454
>UNIPROTKB|I3LJ30 [details] [associations]
symbol:I3LJ30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
Ensembl:ENSSSCT00000030050 OMA:WDLAYEN Uniprot:I3LJ30
Length = 434
Score = 352 (129.0 bits), Expect = 2.8e-31, P = 2.8e-31
Identities = 78/192 (40%), Positives = 110/192 (57%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTL A+AVA F + S+ V+ YVG GA VR L++ A+ ++F DE+DA+G
Sbjct: 223 KTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIG 282
Query: 502 RERGLIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRK 560
R G+GG E T+ +L+ LDGF+ RGN+ + +TNRPD LDPAL+RPGR DRK
Sbjct: 283 GAR-FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 341
Query: 561 IFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG 620
I P L GR I K+HAR + D+ + +A + GAE+ ++ A + +R
Sbjct: 342 IEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRAR 401
Query: 621 RTEITTDDLLQA 632
R T D L+A
Sbjct: 402 RKIATEKDFLEA 413
>UNIPROTKB|Q4R4R0 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9541 "Macaca fascicularis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q9WZ49
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
EMBL:AB169834 ProteinModelPortal:Q4R4R0 SMR:Q4R4R0 PRIDE:Q4R4R0
Uniprot:Q4R4R0
Length = 433
Score = 352 (129.0 bits), Expect = 2.8e-31, P = 2.8e-31
Identities = 78/192 (40%), Positives = 110/192 (57%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTL A+AVA F + S+ V+ YVG GA VR L++ A+ ++F DE+DA+G
Sbjct: 222 KTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIG 281
Query: 502 RERGLIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRK 560
R G+GG E T+ +L+ LDGF+ RGN+ + +TNRPD LDPAL+RPGR DRK
Sbjct: 282 GAR-FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 340
Query: 561 IFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG 620
I P L GR I K+HAR + D+ + +A + GAE+ ++ A + +R
Sbjct: 341 IEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRAR 400
Query: 621 RTEITTDDLLQA 632
R T D L+A
Sbjct: 401 RKIATEKDFLEA 412
>MGI|MGI:109555 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit,
ATPase 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0017025 "TBP-class protein binding"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
MGI:MGI:109555 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
OrthoDB:EOG4RXZ05 ChiTaRS:PSMC2 EMBL:AK005083 EMBL:AK168548
EMBL:BC005462 EMBL:U61283 IPI:IPI00270326 PIR:S39349
UniGene:Mm.2462 ProteinModelPortal:P46471 SMR:P46471 IntAct:P46471
STRING:P46471 PhosphoSite:P46471 REPRODUCTION-2DPAGE:P46471
SWISS-2DPAGE:P46471 PaxDb:P46471 PRIDE:P46471 InParanoid:P46471
Bgee:P46471 Genevestigator:P46471 GermOnline:ENSMUSG00000028932
Uniprot:P46471
Length = 433
Score = 352 (129.0 bits), Expect = 2.8e-31, P = 2.8e-31
Identities = 78/192 (40%), Positives = 110/192 (57%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTL A+AVA F + S+ V+ YVG GA VR L++ A+ ++F DE+DA+G
Sbjct: 222 KTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIG 281
Query: 502 RERGLIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRK 560
R G+GG E T+ +L+ LDGF+ RGN+ + +TNRPD LDPAL+RPGR DRK
Sbjct: 282 GAR-FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 340
Query: 561 IFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG 620
I P L GR I K+HAR + D+ + +A + GAE+ ++ A + +R
Sbjct: 341 IEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRAR 400
Query: 621 RTEITTDDLLQA 632
R T D L+A
Sbjct: 401 RKIATEKDFLEA 412
>RGD|3428 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit, ATPase
2" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0017025 "TBP-class protein binding"
evidence=IPI] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA;ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03061
CTD:5701 OrthoDB:EOG4RXZ05 EMBL:D50694 EMBL:BC061542 EMBL:U13895
IPI:IPI00421600 RefSeq:NP_150239.1 UniGene:Rn.1202
ProteinModelPortal:Q63347 IntAct:Q63347 MINT:MINT-1794034
STRING:Q63347 PhosphoSite:Q63347 PRIDE:Q63347 GeneID:25581
KEGG:rno:25581 InParanoid:Q63347 NextBio:607227 Genevestigator:Q63347
GermOnline:ENSRNOG00000012026 Uniprot:Q63347
Length = 433
Score = 352 (129.0 bits), Expect = 2.8e-31, P = 2.8e-31
Identities = 78/192 (40%), Positives = 110/192 (57%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTL A+AVA F + S+ V+ YVG GA VR L++ A+ ++F DE+DA+G
Sbjct: 222 KTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIG 281
Query: 502 RERGLIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRK 560
R G+GG E T+ +L+ LDGF+ RGN+ + +TNRPD LDPAL+RPGR DRK
Sbjct: 282 GAR-FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 340
Query: 561 IFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG 620
I P L GR I K+HAR + D+ + +A + GAE+ ++ A + +R
Sbjct: 341 IEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRAR 400
Query: 621 RTEITTDDLLQA 632
R T D L+A
Sbjct: 401 RKIATEKDFLEA 412
>UNIPROTKB|Q63347 [details] [associations]
symbol:Psmc2 "26S protease regulatory subunit 7"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 CTD:5701 OrthoDB:EOG4RXZ05
EMBL:D50694 EMBL:BC061542 EMBL:U13895 IPI:IPI00421600
RefSeq:NP_150239.1 UniGene:Rn.1202 ProteinModelPortal:Q63347
IntAct:Q63347 MINT:MINT-1794034 STRING:Q63347 PhosphoSite:Q63347
PRIDE:Q63347 GeneID:25581 KEGG:rno:25581 InParanoid:Q63347
NextBio:607227 Genevestigator:Q63347 GermOnline:ENSRNOG00000012026
Uniprot:Q63347
Length = 433
Score = 352 (129.0 bits), Expect = 2.8e-31, P = 2.8e-31
Identities = 78/192 (40%), Positives = 110/192 (57%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTL A+AVA F + S+ V+ YVG GA VR L++ A+ ++F DE+DA+G
Sbjct: 222 KTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIG 281
Query: 502 RERGLIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRK 560
R G+GG E T+ +L+ LDGF+ RGN+ + +TNRPD LDPAL+RPGR DRK
Sbjct: 282 GAR-FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 340
Query: 561 IFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG 620
I P L GR I K+HAR + D+ + +A + GAE+ ++ A + +R
Sbjct: 341 IEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRAR 400
Query: 621 RTEITTDDLLQA 632
R T D L+A
Sbjct: 401 RKIATEKDFLEA 412
>ZFIN|ZDB-GENE-040426-1327 [details] [associations]
symbol:psmc2 "proteasome (prosome, macropain) 26S
subunit, ATPase 2" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040426-1327 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03061 OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978
OrthoDB:EOG4RXZ05 HSSP:Q9LCZ4 EMBL:BX571796 EMBL:BC053187
IPI:IPI00491385 RefSeq:NP_957260.1 UniGene:Dr.75589 STRING:Q7T3B1
Ensembl:ENSDART00000019647 GeneID:393941 KEGG:dre:393941
InParanoid:Q7T3B1 NextBio:20814913 Uniprot:Q7T3B1
Length = 433
Score = 352 (129.0 bits), Expect = 2.8e-31, P = 2.8e-31
Identities = 78/192 (40%), Positives = 110/192 (57%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTL A+AVA F + S+ V+ YVG GA VR L++ A+ ++F DE+DA+G
Sbjct: 222 KTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIG 281
Query: 502 RERGLIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRK 560
R G+GG E T+ +L+ LDGF+ RGN+ + +TNRPD LDPAL+RPGR DRK
Sbjct: 282 GAR-FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 340
Query: 561 IFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG 620
I P L GR I K+HAR + D+ + +A + GAE+ ++ A + +R
Sbjct: 341 IEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRAR 400
Query: 621 RTEITTDDLLQA 632
R T D L+A
Sbjct: 401 RKIATEKDFLEA 412
>POMBASE|SPBC16C6.07c [details] [associations]
symbol:rpt1 "19S proteasome regulatory subunit Rpt1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16C6.07c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03061
OMA:DIRWELI PIR:T39558 RefSeq:NP_596805.1 ProteinModelPortal:O42931
IntAct:O42931 STRING:O42931 PRIDE:O42931
EnsemblFungi:SPBC16C6.07c.1 GeneID:2539862 KEGG:spo:SPBC16C6.07c
OrthoDB:EOG4B01XN NextBio:20801008 Uniprot:O42931
Length = 438
Score = 351 (128.6 bits), Expect = 3.6e-31, P = 3.6e-31
Identities = 77/199 (38%), Positives = 112/199 (56%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTL A+AVA F + S+ V+ YVG GA VR L++ A+ ++F DE+DA+G
Sbjct: 226 KTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAIG 285
Query: 502 RERGLIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRK 560
R G+GG E T+ +L+ LDGF+ RGN+ + +TNRP+ LD AL+RPGR DRK
Sbjct: 286 GAR-FDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGRIDRK 344
Query: 561 IFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG 620
+ P L GR IL++HA+ + D+ + +A + GAEL ++ A + +R
Sbjct: 345 VEFGLPDLEGRAHILRIHAKSMAIDKDIRWELIARLCPSQTGAELRSVCTEAGMFAIRAR 404
Query: 621 RTEITTDDLLQAAQIEERG 639
R T D L A Q +G
Sbjct: 405 RRVATEKDFLDAVQKVVKG 423
>POMBASE|SPBC4.07c [details] [associations]
symbol:rpt2 "19S proteasome regulatory subunit Rpt2"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC4.07c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0007346
GO:GO:0043161 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016887
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03062 OMA:FIRNQER EMBL:Z29366 PIR:S39348
RefSeq:NP_595480.1 ProteinModelPortal:P36612 IntAct:P36612
STRING:P36612 PRIDE:P36612 EnsemblFungi:SPBC4.07c.1 GeneID:2540939
KEGG:spo:SPBC4.07c OrthoDB:EOG4FN7S6 NextBio:20802054
Uniprot:P36612
Length = 448
Score = 350 (128.3 bits), Expect = 4.6e-31, P = 4.6e-31
Identities = 77/231 (33%), Positives = 125/231 (54%)
Query: 407 QYLERGVDVKFS--DMYRRRGVRXXXXXXXXXXXXXXKTLLAKAVAGEAGVNFFSISASQ 464
Q ++ V++ + ++Y G++ KTLLAKAVA + F + S+
Sbjct: 201 QEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSE 260
Query: 465 FVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLV 524
++ Y+G G VR L+ A++++PS+VFIDE+DA+G +R + +E T+ +LL
Sbjct: 261 LIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAIGTKRYDAQSGAEREIQRTMLELLN 320
Query: 525 CLDGFE-GRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKP 583
LDGF+ + ++ I +TNR LDPAL+RPGR DRKI P + +I +H K
Sbjct: 321 QLDGFDTSQRDIKVIMATNRISDLDPALIRPGRIDRKILFENPDEATKRKIFTIHTSKMN 380
Query: 584 MADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQ 634
+ +DV+ + D + GAE+ IV A + +R+ R + DD QA +
Sbjct: 381 LGEDVNLEELIQCKDDLSGAEIKAIVSEAGLLALRERRMRVVMDDFRQARE 431
>FB|FBgn0261014 [details] [associations]
symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
[GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
plasm oskar mRNA localization" evidence=IMP] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
"oocyte microtubule cytoskeleton polarization" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0006200 "ATP catabolic process"
evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
Length = 801
Score = 371 (135.7 bits), Expect = 7.3e-31, P = 7.3e-31
Identities = 73/171 (42%), Positives = 105/171 (61%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKA+A E NF S+ + + ++ G + VR ++ +A+ AP V+F DELD++
Sbjct: 521 KTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSAAPCVLFFDELDSIA 580
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+ RG G G D +NQ+L +DG + NV I +TNRPDI+DPA++RPGR D+ I
Sbjct: 581 KARGGNVGDAGGAADRVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLI 640
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVA 612
+IP P R ILK + RK P+A +VD +A +T G GA+L I + A
Sbjct: 641 YIPLPDDKSREAILKANLRKSPLAKEVDLTYIAKVTQGFSGADLTEICQRA 691
Score = 366 (133.9 bits), Expect = 2.6e-30, P = 2.6e-30
Identities = 95/273 (34%), Positives = 153/273 (56%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTL+A+AVA E G FF I+ + + G S +R ++EA+ N+P+++FIDE+DA+
Sbjct: 248 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIA 307
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R K G ER ++QLL +DG + ++I +A+TNRP+ +DPAL R GRFDR+I
Sbjct: 308 PKRD--KTHGEVER-RIVSQLLTLMDGMKKSSHLIVMAATNRPNSIDPALRRFGRFDREI 364
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
I P GR+E+L++H + + DDVD +A+ + G VGA+LA++ AA+ +R+
Sbjct: 365 DIGIPDATGRLEVLRIHTKNMKLHDDVDLEQIAAESHGHVGADLASLCSEAALQQIREKM 424
Query: 622 TEITT-DDLLQAAQIEERGMLDRKERSSETWRQV-AINEAAMAVVAVNFPDLKNIEFVTI 679
I DD + A + + R + T A+ E + V + D+ +E V
Sbjct: 425 DLIDLEDDKIDAEVLASLAVTMENFRYAMTKSSPSALRETVVEVPNTTWTDIGGLESVK- 483
Query: 680 APRAGRELGYVRMKMDHM-KF-KEGMLSRQSLL 710
+ +EL V+ ++H KF K GM + +L
Sbjct: 484 --KELQEL--VQYPVEHPDKFLKFGMQPSRGVL 512
>WB|WBGene00007352 [details] [associations]
symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
InParanoid:P54811 NextBio:884814 Uniprot:P54811
Length = 809
Score = 370 (135.3 bits), Expect = 9.7e-31, P = 9.7e-31
Identities = 95/273 (34%), Positives = 153/273 (56%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTL+A+AVA E G FF I+ + + G S +R ++E + N P+++FIDE+DA+
Sbjct: 257 KTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIA 316
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R K +G ER ++QLL +DG +GR N++ IA+TNRP+ +D AL R GRFDR+I
Sbjct: 317 PKRE--KTNGEVER-RIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREI 373
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
I P +GR+EIL++H + +ADDVD +A+ G VGA+LA++ AA+ +R+
Sbjct: 374 DIGIPDAVGRLEILRIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQIREKM 433
Query: 622 TEITT-DDLLQAAQIEERGMLDRKERSSETWRQV-AINEAAMAVVAVNFPDLKNIEFVTI 679
I DD + A + + R ++ A+ EA + + D+ ++ V
Sbjct: 434 ELIDLEDDQIDAEVLNSLAVTMENFRFAQGKSSPSALREAVVETPNTTWSDIGGLQNVK- 492
Query: 680 APRAGRELGYVRMKMDHMK--FKEGMLSRQSLL 710
R +EL V+ ++H + K GM + +L
Sbjct: 493 --RELQEL--VQYPVEHPEKYLKFGMQPSRGVL 521
Score = 363 (132.8 bits), Expect = 5.7e-30, P = 5.7e-30
Identities = 79/203 (38%), Positives = 116/203 (57%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKA+A E NF SI + + ++ G + VR ++ +A+ AP V+F DELD++
Sbjct: 530 KTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIA 589
Query: 502 RERGL-IKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRK 560
+ RG G GG D +NQ+L +DG + NV I +TNRPDI+DPA++RPGR D+
Sbjct: 590 KARGGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQL 649
Query: 561 IFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG 620
I+IP P R +ILK RK P++ D+D +A T G GA+L I + A +R+
Sbjct: 650 IYIPLPDEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRES 709
Query: 621 -RTEITTDDLLQAAQIEERGMLD 642
EI + Q Q +++
Sbjct: 710 IEKEIRIEKERQDRQARGEELME 732
>UNIPROTKB|P54811 [details] [associations]
symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
NextBio:884814 Uniprot:P54811
Length = 809
Score = 370 (135.3 bits), Expect = 9.7e-31, P = 9.7e-31
Identities = 95/273 (34%), Positives = 153/273 (56%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTL+A+AVA E G FF I+ + + G S +R ++E + N P+++FIDE+DA+
Sbjct: 257 KTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIA 316
Query: 502 RERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKI 561
+R K +G ER ++QLL +DG +GR N++ IA+TNRP+ +D AL R GRFDR+I
Sbjct: 317 PKRE--KTNGEVER-RIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREI 373
Query: 562 FIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGR 621
I P +GR+EIL++H + +ADDVD +A+ G VGA+LA++ AA+ +R+
Sbjct: 374 DIGIPDAVGRLEILRIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQIREKM 433
Query: 622 TEITT-DDLLQAAQIEERGMLDRKERSSETWRQV-AINEAAMAVVAVNFPDLKNIEFVTI 679
I DD + A + + R ++ A+ EA + + D+ ++ V
Sbjct: 434 ELIDLEDDQIDAEVLNSLAVTMENFRFAQGKSSPSALREAVVETPNTTWSDIGGLQNVK- 492
Query: 680 APRAGRELGYVRMKMDHMK--FKEGMLSRQSLL 710
R +EL V+ ++H + K GM + +L
Sbjct: 493 --RELQEL--VQYPVEHPEKYLKFGMQPSRGVL 521
Score = 363 (132.8 bits), Expect = 5.7e-30, P = 5.7e-30
Identities = 79/203 (38%), Positives = 116/203 (57%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLAKA+A E NF SI + + ++ G + VR ++ +A+ AP V+F DELD++
Sbjct: 530 KTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIA 589
Query: 502 RERGL-IKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRK 560
+ RG G GG D +NQ+L +DG + NV I +TNRPDI+DPA++RPGR D+
Sbjct: 590 KARGGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQL 649
Query: 561 IFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG 620
I+IP P R +ILK RK P++ D+D +A T G GA+L I + A +R+
Sbjct: 650 IYIPLPDEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRES 709
Query: 621 -RTEITTDDLLQAAQIEERGMLD 642
EI + Q Q +++
Sbjct: 710 IEKEIRIEKERQDRQARGEELME 732
>TAIR|locus:2024822 [details] [associations]
symbol:RPT1A "regulatory particle triple-A 1A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC009324 EMBL:AC024260
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123390 EMBL:AY062860 EMBL:BT000069 IPI:IPI00548766
PIR:G96577 RefSeq:NP_175778.1 UniGene:At.66918
ProteinModelPortal:Q9SSB5 SMR:Q9SSB5 IntAct:Q9SSB5 STRING:Q9SSB5
PaxDb:Q9SSB5 PRIDE:Q9SSB5 EnsemblPlants:AT1G53750.1 GeneID:841812
KEGG:ath:AT1G53750 GeneFarm:2748 TAIR:At1g53750 InParanoid:Q9SSB5
KO:K03061 OMA:DIRWELI PhylomeDB:Q9SSB5 ProtClustDB:CLSN2682130
Genevestigator:Q9SSB5 GermOnline:AT1G53750 Uniprot:Q9SSB5
Length = 426
Score = 347 (127.2 bits), Expect = 9.8e-31, P = 9.8e-31
Identities = 76/192 (39%), Positives = 108/192 (56%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTLLA+AVA F + S+ V+ YVG GA VR L+Q A+ +VF DE+DA+G
Sbjct: 215 KTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIG 274
Query: 502 RERGLIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRK 560
R G GG E T+ +++ LDGF+ RGN+ + +TNRPD LDPAL+RPGR DRK
Sbjct: 275 GAR-FDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRK 333
Query: 561 IFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG 620
+ P L R +I K+H R D+ + +A + GA++ ++ A + +R
Sbjct: 334 VEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRAR 393
Query: 621 RTEITTDDLLQA 632
R +T D L A
Sbjct: 394 RKTVTEKDFLDA 405
>DICTYBASE|DDB_G0276917 [details] [associations]
symbol:psmC2 "26S proteasome ATPase 2 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0000502
"proteasome complex" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0276917 GO:GO:0005524 GO:GO:0005634 GO:GO:0045335
GenomeReviews:CM000151_GR GO:GO:0016887 GO:GO:0000502 GO:GO:0006511
HSSP:Q9WZ49 EMBL:AAFI02000019 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03061 RefSeq:XP_642830.1 ProteinModelPortal:Q86JA1
STRING:Q86JA1 PRIDE:Q86JA1 EnsemblProtists:DDB0232966
GeneID:8620693 KEGG:ddi:DDB_G0276917 OMA:HIFTIHA
ProtClustDB:CLSZ2429177 Uniprot:Q86JA1
Length = 428
Score = 346 (126.9 bits), Expect = 1.3e-30, P = 1.3e-30
Identities = 75/192 (39%), Positives = 110/192 (57%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTL A+AVA F + S+ V+ YVG GA VR L+Q A+ ++F DE+DA+G
Sbjct: 217 KTLCARAVANRTDAAFVRVIGSELVQKYVGEGARMVRDLFQMARSKKACIIFFDEVDAIG 276
Query: 502 RERGLIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRK 560
R G+GG E T+ +L+ LDGF+ RGN+ + +TNRPD LDPAL+RPGR DRK
Sbjct: 277 GAR-FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALLRPGRLDRK 335
Query: 561 IFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG 620
+ P L GR I +HA+ A D+ + +A + GA++ ++ A + +R
Sbjct: 336 VEFGLPDLEGRAHIFTIHAKTMSCARDIRFELLARLCPNSTGADIRSVCTEAGMFAIRAR 395
Query: 621 RTEITTDDLLQA 632
R ++ D L+A
Sbjct: 396 RKVVSEKDFLEA 407
>FB|FBgn0028687 [details] [associations]
symbol:Rpt1 "Regulatory particle triple-A ATPase 1"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE013599 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
KO:K03061 OMA:DIRWELI GeneTree:ENSGT00550000074978 HSSP:Q9LCZ4
EMBL:AF145307 EMBL:AY061606 RefSeq:NP_477473.1 UniGene:Dm.3425
SMR:Q7KMQ0 IntAct:Q7KMQ0 STRING:Q7KMQ0 EnsemblMetazoa:FBtr0088947
GeneID:35701 KEGG:dme:Dmel_CG1341 UCSC:CG1341-RA CTD:35701
FlyBase:FBgn0028687 HOGENOM:HOG000237377 InParanoid:Q7KMQ0
OrthoDB:EOG4X3FGQ GenomeRNAi:35701 NextBio:794815 Uniprot:Q7KMQ0
Length = 433
Score = 346 (126.9 bits), Expect = 1.3e-30, P = 1.3e-30
Identities = 76/194 (39%), Positives = 110/194 (56%)
Query: 442 KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVG 501
KTL A+AVA F + S+ V+ YVG GA VR L++ A+ ++F DE+DA+G
Sbjct: 222 KTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKKACLIFFDEIDAIG 281
Query: 502 RERGLIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRK 560
R G+GG E T+ +L+ LDGF+ RGN+ + +TNRPD LDPAL+RPGR DRK
Sbjct: 282 GAR-FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 340
Query: 561 IFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDG 620
+ P GR I K+HAR + D+ + +A + GAE+ ++ A + +R
Sbjct: 341 VEFGLPDQDGRSHIFKIHARSMSVERDIRFDLLARLCPNSTGAEIRSVCTEAGMFAIRAR 400
Query: 621 RTEITTDDLLQAAQ 634
R T D L+A +
Sbjct: 401 RKVATEKDFLEAVK 414
WARNING: HSPs involving 395 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.390 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 862 732 0.00087 121 3 11 22 0.39 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 645
No. of states in DFA: 615 (65 KB)
Total size of DFA: 359 KB (2179 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 56.30u 0.63s 56.93t Elapsed: 00:00:03
Total cpu time: 56.35u 0.64s 56.99t Elapsed: 00:00:03
Start: Fri May 10 05:18:30 2013 End: Fri May 10 05:18:33 2013
WARNINGS ISSUED: 2