BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002961
(862 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2JNP0|FTSH_SYNJB ATP-dependent zinc metalloprotease FtsH OS=Synechococcus sp.
(strain JA-2-3B'a(2-13)) GN=ftsH PE=3 SV=1
Length = 638
Score = 311 bits (797), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 196/476 (41%), Positives = 272/476 (57%), Gaps = 36/476 (7%)
Query: 380 QNPHLKMAMQFMKSGARVRRAYGKGLPQYLERGVD------------VKFSDMYRRRGVR 427
QN A+ F KS ARV+ + G+D +K S+ + G +
Sbjct: 141 QNGPGSQALNFGKSRARVQMEPKTQITFNDVAGIDQAKLELAEVVDFLKNSERFTALGAK 200
Query: 428 IPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDN 487
IP G+LL GPPG GKTLLA+AVAGEAGV FFSIS S+FVE++VGVGASRVR L+++AK N
Sbjct: 201 IPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFEQAKQN 260
Query: 488 APSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDIL 547
AP +VFIDE+DAVGR+RG G G ER+ TLNQLL +DGFEG +I IA+TNRPD+L
Sbjct: 261 APCIVFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLTEMDGFEGNSGIIVIAATNRPDVL 320
Query: 548 DPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELAN 607
D AL+RPGRFDR++ + +P GR+EILKVHAR K ++ DVD +A T G GA+LAN
Sbjct: 321 DAALLRPGRFDRQVTVDRPDFQGRLEILKVHARGKTLSADVDLEKLARRTPGFTGADLAN 380
Query: 608 IVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQ-VAINEAAMAVVAV 666
++ AAI R TEI+ D++ A G + SE ++ VA +EA A+V
Sbjct: 381 LLNEAAILAARRNLTEISMDEINDAVDRVLAGPEKKDRLMSERRKELVAYHEAGHALVGS 440
Query: 667 NFPDLKNIEFVTIAPRA-GRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADEL 725
P+ I+ VTI PR L + D M G+ +R L + +TV L R A+E+
Sbjct: 441 LLPNYDPIQKVTIIPRGQAGGLTWFMPSDDDM----GLTTRAHLKNMMTVALGGRVAEEV 496
Query: 726 WCGEGQLSTIWAETADNARSAARTFVLG-GLSDKHFGL------SNFWVADRINE----- 773
GE +++T A AR V G+SD+ + +N ++ I
Sbjct: 497 VYGESEITTGAASDLQQVARIARNMVTRFGMSDRLGNVALGRQYANIFLGREIAAERDFS 556
Query: 774 ------IDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLVE 823
ID E R++N Y+RA +++ NR LLD + LVE +++ +E +++
Sbjct: 557 EETAALIDEEVRRLVNEAYQRATYLIRENRALLDRIARRLVEAETIDGEELQAIID 612
>sp|P72991|FTSH3_SYNY3 ATP-dependent zinc metalloprotease FtsH 3 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=ftsH3 PE=1 SV=1
Length = 616
Score = 311 bits (797), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 196/467 (41%), Positives = 270/467 (57%), Gaps = 32/467 (6%)
Query: 387 AMQFMKSGARVRR------AYGK--GLPQY---LERGVD-VKFSDMYRRRGVRIPGGILL 434
AM F KS ARV+ +G G+ Q L VD +K +D + G +IP G+LL
Sbjct: 140 AMNFGKSKARVQMEPQTQVTFGDVAGIEQAKLELTEVVDFLKNADRFTELGAKIPKGVLL 199
Query: 435 CGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFI 494
GPPG GKTLLAKAVAGEAGV FFSIS S+FVE++VGVGASRVR L+++AK NAP +VFI
Sbjct: 200 VGPPGTGKTLLAKAVAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFEQAKANAPCIVFI 259
Query: 495 DELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRP 554
DE+DAVGR+RG G G ER+ TLNQLL +DGFEG +I +A+TNRPD+LD AL+RP
Sbjct: 260 DEIDAVGRQRGAGLGGGNDEREQTLNQLLTEMDGFEGNTGIIIVAATNRPDVLDSALMRP 319
Query: 555 GRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAI 614
GRFDR++ + +P GR EIL VHAR K ++ DVD +A T G GA+L+N++ AAI
Sbjct: 320 GRFDRQVVVDRPDYAGRREILNVHARGKTLSQDVDLDKIARRTPGFTGADLSNLLNEAAI 379
Query: 615 NMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQ-VAINEAAMAVVAVNFPDLKN 673
R TEI+ D++ A G + SE + VA +EA A+V PD
Sbjct: 380 LAARRNLTEISMDEVNDAIDRVLAGPEKKNRVMSEKRKTLVAYHEAGHALVGALMPDYDP 439
Query: 674 IEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLS 733
++ ++I PR GR G + + G+ SR L + + V L R A+E+ GE +++
Sbjct: 440 VQKISIIPR-GRAGGLTWFTPSEDRMESGLYSRSYLQNQMAVALGGRIAEEIIFGEEEVT 498
Query: 734 TIWAETADNARSAARTFVL-GGLSDK-----------HFGLSNFWVADR------INEID 775
T + AR V G+SD+ L +DR ID
Sbjct: 499 TGASNDLQQVARVARQMVTRFGMSDRLGPVALGRQGGGVFLGRDIASDRDFSDETAAAID 558
Query: 776 TEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLV 822
E ++++ Y+RAK++L NR +LD + LVEK+++ +E L+
Sbjct: 559 EEVSQLVDQAYQRAKQVLVENRGILDQLAEILVEKETVDSEELQTLL 605
>sp|Q9WZ49|FTSH_THEMA ATP-dependent zinc metalloprotease FtsH OS=Thermotoga maritima
(strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
GN=ftsH PE=1 SV=1
Length = 610
Score = 311 bits (796), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 183/418 (43%), Positives = 260/418 (62%), Gaps = 26/418 (6%)
Query: 421 YRRRGVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSL 480
+ R G R+P GILL GPPG GKTLLA+AVAGEA V FF IS S FVE++VGVGA+RVR L
Sbjct: 186 FNRIGARMPKGILLVGPPGTGKTLLARAVAGEANVPFFHISGSDFVELFVGVGAARVRDL 245
Query: 481 YQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIAS 540
+ +AK +AP +VFIDE+DAVGR RG G G ER+ TLNQLLV +DGF+ + +I +A+
Sbjct: 246 FAQAKAHAPCIVFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFDSKEGIIVMAA 305
Query: 541 TNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGM 600
TNRPDILDPAL+RPGRFD+KI + P ++GR +IL++H R KP+A+DV+ +A T G
Sbjct: 306 TNRPDILDPALLRPGRFDKKIVVDPPDMLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGF 365
Query: 601 VGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINE 658
VGA+L N+V AA+ R+GR +IT D +A G RK + S + R +A +E
Sbjct: 366 VGADLENLVNEAALLAAREGRDKITMKDFEEAIDRVIAGPA-RKSKLISPKEKRIIAYHE 424
Query: 659 AAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLA 718
A AVV+ P+ + + ++I PR + LGY + K+ ++SR LLD +T L
Sbjct: 425 AGHAVVSTVVPNGEPVHRISIIPRGYKALGYTLHLPEEDKY---LVSRNELLDKLTALLG 481
Query: 719 PRAADELWCGEGQLSTIWAETADNARSAARTFVLG-GLSDKHFGLS------NFWVADRI 771
RAA+E+ G+ +++ A + A AR V G+S++ L+ ++ I
Sbjct: 482 GRAAEEVVFGD--VTSGAANDIERATEIARNMVCQLGMSEELGPLAWGKEEQEVFLGKEI 539
Query: 772 -----------NEIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEF 818
++ID E +I+ CYERAKEI+++ R LD +V L+EK+++ E
Sbjct: 540 TRLRNYSEEVASKIDEEVKKIVTNCYERAKEIIRKYRKQLDNIVEILLEKETIEGDEL 597
>sp|D4HA34|FTSH_PROAS ATP-dependent zinc metalloprotease FtsH OS=Propionibacterium acnes
(strain SK137) GN=ftsH PE=3 SV=1
Length = 717
Score = 309 bits (792), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 186/422 (44%), Positives = 258/422 (61%), Gaps = 37/422 (8%)
Query: 421 YRRRGVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSL 480
++R G +IP G+LL GPPG GKTLLA+AVAGEAGV FFSIS S FVE++VGVGASRVR L
Sbjct: 192 FQRVGAKIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDL 251
Query: 481 YQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIAS 540
+++AK+ AP+++FIDE+DAVGR RG G G ER+ TLNQLLV +DGF+ G VI IA+
Sbjct: 252 FEQAKEAAPAIIFIDEIDAVGRHRGAGMGGGHDEREQTLNQLLVEMDGFDVHGGVILIAA 311
Query: 541 TNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGM 600
TNRPD+LDPAL+RPGRFDR+I + P L GR++ILKVHA KPMADDVD ++A T GM
Sbjct: 312 TNRPDVLDPALLRPGRFDRQIAVEAPDLDGRLKILKVHAHGKPMADDVDLASIARRTPGM 371
Query: 601 VGAELANIVEVAAI-----NMMRDGRTEI--TTDDLLQAAQIEERGMLDRKERSSETWRQ 653
GA+LAN++ AA+ N+ G +E+ D ++ Q + R ++++ ER
Sbjct: 372 TGADLANVLNEAALLTARANLPVIGNSELDEAIDRVIAGPQKKTR-LMNQHER-----LV 425
Query: 654 VAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHI 713
A +E A+VA P ++ +TI PR GR LGY + D K+ + +R LLD +
Sbjct: 426 TAYHEGGHALVAAAMPGTDPVQKITILPR-GRALGYTMVMPDSDKYSQ---TRSELLDSM 481
Query: 714 TVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFV-------------LG-GLSDKH 759
+ RAA+EL + ST + + A AR V LG G ++
Sbjct: 482 AYMMGGRAAEELIFHD--PSTGASNDIEKATKVARALVTQYGLSARVGTVQLGSGDTEPF 539
Query: 760 FGLSNFWVADRINE----IDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTK 815
G++ D +E ID E +L ++ A + L NR +LD +V +L +++L+K
Sbjct: 540 LGMTAGQQRDYSDETAKIIDDEVRELLENAHQEAFDCLDANREVLDELVRQLFARETLSK 599
Query: 816 QE 817
E
Sbjct: 600 AE 601
>sp|B8D065|FTSH_HALOH ATP-dependent zinc metalloprotease FtsH OS=Halothermothrix orenii
(strain H 168 / OCM 544 / DSM 9562) GN=ftsH PE=3 SV=1
Length = 630
Score = 308 bits (789), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 191/478 (39%), Positives = 268/478 (56%), Gaps = 48/478 (10%)
Query: 388 MQFMKSGARVRRAYGKGLPQYLERGVDVKFSDM----------------------YRRRG 425
MQ M+ G ++GK + E G V F D+ + R G
Sbjct: 133 MQRMQGGGSQMMSFGKSRARLSENGKKVTFEDVANYEEVKEELQEVVEFLKNPDKFTRMG 192
Query: 426 VRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAK 485
++P G+LL GPPG GKTLLA+AVAGEAGV FF IS S FVE++VGVGASRVR L+++ K
Sbjct: 193 AKVPKGVLLVGPPGTGKTLLARAVAGEAGVPFFIISGSDFVEMFVGVGASRVRDLFEQGK 252
Query: 486 DNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPD 545
NAP ++FIDELDAVGR+RG G G ER+ TLNQLLV +DGFE +I +A+TNRPD
Sbjct: 253 KNAPCIIFIDELDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFEPNEGIIVMAATNRPD 312
Query: 546 ILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAEL 605
+LDPAL+RPGRFDR++ + KP + GRM ILK+H R KP+ADDVD +A T G GA++
Sbjct: 313 VLDPALLRPGRFDRQVVVDKPDVKGRMGILKIHLRNKPVADDVDVEVLAKRTPGFTGADM 372
Query: 606 ANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQ-VAINEAAMAVV 664
N+ AAI +R + +IT +D A G + + SE R+ VA +E A+V
Sbjct: 373 ENLANEAAILAVRRRKNKITMEDFDDAIDKVIAGPAKKSKVMSERERKLVAYHETGHALV 432
Query: 665 AVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADE 724
++I PR GR G M+ K + +S+Q LLD ITV L RA++
Sbjct: 433 GDLLEHADRTHKISIVPR-GRAGG---MRWALPKEDKNFMSKQELLDQITVLLGGRASES 488
Query: 725 LWCGEGQLSTIWAETADNARSAARTFV--------LGGLSDKHFGLSNFWVADRIN---- 772
++ + +ST + A AR V LG L+ H ++ I+
Sbjct: 489 IFLED--ISTGAQNDLERATKLARAMVTEYGMSEKLGPLTLGHKHDEQIFLGRDISRQRN 546
Query: 773 -------EIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLVE 823
EID E I+ CY+RA++ILQ N ++ +V EL+++++L ++ L++
Sbjct: 547 YSEEIAAEIDKEVSSIIEYCYQRAEKILQENTAKVERIVRELLDRETLDAEQLQKLIK 604
>sp|Q8YMZ8|FTSH_NOSS1 ATP-dependent zinc metalloprotease FtsH OS=Nostoc sp. (strain PCC
7120 / UTEX 2576) GN=ftsH PE=3 SV=1
Length = 656
Score = 305 bits (781), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 178/415 (42%), Positives = 251/415 (60%), Gaps = 21/415 (5%)
Query: 425 GVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEA 484
G RIP G+LL GPPG GKTLLAKA+AGEA V FFSIS S+FVE++VGVGASRVR L+++A
Sbjct: 228 GARIPKGVLLVGPPGTGKTLLAKAIAGEAAVPFFSISGSEFVEMFVGVGASRVRDLFKKA 287
Query: 485 KDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRP 544
KDNAP ++FIDE+DAVGR+RG G G ER+ TLNQLL +DGFEG +I IA+TNRP
Sbjct: 288 KDNAPCLIFIDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRP 347
Query: 545 DILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAE 604
D+LD AL+RPGRFDR++ + P L GR+EIL+VH+R K + V A+A T G GA+
Sbjct: 348 DVLDSALLRPGRFDRQVIVDAPDLKGRLEILQVHSRNKKVDPSVSLEAIARRTPGFTGAD 407
Query: 605 LANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQVAINEAAMAVV 664
LAN++ AAI R + IT ++ A GM S++ R +A +E +V
Sbjct: 408 LANLLNEAAILTARRRKEAITILEIDDAVDRVVAGMEGTPLVDSKSKRLIAYHEVGHGLV 467
Query: 665 AVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADE 724
D ++ VT+ PR G+ G + ++G++SR L IT LA RAA+E
Sbjct: 468 GTLLKDHDPVQKVTLIPR-GQAQGLTWFTPNE---EQGLISRSQLKARITSTLAGRAAEE 523
Query: 725 LWCGEGQLSTIWAETADNARSAARTFV-------LGGLSDKHFGLSNFWVADRIN----- 772
+ G+ +++T + S AR V LG LS ++ F D +N
Sbjct: 524 IVFGKPEVTTGAGDDLQKVTSMARQMVTKFGMSELGPLSLENQSGEVFLGRDWMNKSDYS 583
Query: 773 -----EIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLV 822
+ID++ I+N CY+ +KE+LQ NR +++ +V+ L E++++ F +V
Sbjct: 584 EEIAAKIDSQVREIINTCYQTSKELLQTNRVVMERLVDLLTEQETIEGDLFRKIV 638
>sp|Q10ZF7|FTSH_TRIEI ATP-dependent zinc metalloprotease FtsH OS=Trichodesmium erythraeum
(strain IMS101) GN=ftsH PE=3 SV=1
Length = 667
Score = 303 bits (776), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 179/437 (40%), Positives = 261/437 (59%), Gaps = 28/437 (6%)
Query: 425 GVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEA 484
G +IP G+LL GPPG GKTLLAKA+AGEAGV FFSIS S+FVE++VGVGASRVR L+++A
Sbjct: 232 GAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKA 291
Query: 485 KDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRP 544
K+NAP ++FIDE+DAVGR+RG G G ER+ TLNQLL +DGFEG +I IA+TNRP
Sbjct: 292 KENAPCIIFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNSGIIIIAATNRP 351
Query: 545 DILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAE 604
D+LD AL+RPGRFDR++ + P GR+ IL+VHAR K + ++ A+A T G GA+
Sbjct: 352 DVLDVALLRPGRFDRQVTVDLPAYKGRLGILEVHARNKKLTPEISLEAIARKTPGFSGAD 411
Query: 605 LANIVEVAAINMMRDGRTEITTDDLLQAAQIEERG-----MLDRKERSSETWRQVAINEA 659
LAN++ AAI R + IT +++ A G +LD K++ R +A +E
Sbjct: 412 LANMLNEAAILTARRRKEGITPNEIDDAIDRVTIGLSLTPLLDGKKK-----RLIAYHEL 466
Query: 660 AMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAP 719
A++ + + VTI PR+G G+ + MD GM +R L+D IT+ L
Sbjct: 467 GHALLMTLLKNSDLLNKVTIIPRSGGVGGFAQPIMDEGMIDSGMYTRGWLIDRITISLGG 526
Query: 720 RAADELWCGEGQLSTIWAETADNARSAARTFV-------LGGLS----DKHFGLSNFWVA 768
RAA+E G +++ A + S AR V LG L+ + L W +
Sbjct: 527 RAAEEEIFGLAEVTVGAANDIRSVASLAREMVTRYGMSDLGPLALENPNGEVFLGRGWQS 586
Query: 769 DRIN-------EIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHL 821
+ +ID + ++ CYE+A++I++ NR L+D +V+ L+EK+++ EF +
Sbjct: 587 QQPEYSEEVAIKIDHQIRTMVFHCYEKARKIIRENRVLMDRLVDLLIEKETIEGDEFRRI 646
Query: 822 VELHGSLEPMPPSIVDI 838
V + L S++++
Sbjct: 647 VSEYTELPKKQKSLINL 663
>sp|C7N1I1|FTSH_SLAHD ATP-dependent zinc metalloprotease FtsH OS=Slackia
heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC
11029 / RHS 1) GN=ftsH PE=3 SV=1
Length = 783
Score = 302 bits (774), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 172/419 (41%), Positives = 260/419 (62%), Gaps = 31/419 (7%)
Query: 421 YRRRGVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSL 480
Y++ G +IP G LL GPPG GKTLLA+AVAGEA V FFSIS S+FVE++VGVGASRVR+L
Sbjct: 310 YQKLGAKIPRGCLLVGPPGTGKTLLARAVAGEANVPFFSISGSEFVEMFVGVGASRVRNL 369
Query: 481 YQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIAS 540
+++AK+ APS++FIDE+DAVGR+RG G G ER+ TLNQLLV +DGFE V+ IA+
Sbjct: 370 FEQAKEAAPSIIFIDEIDAVGRQRGTGLGGGHDEREQTLNQLLVEMDGFEKNDAVVLIAA 429
Query: 541 TNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGM 600
TNR D+LDPAL+RPGRFDR+I + P + GR++IL+VHA+ KP+ +DVD +A +T GM
Sbjct: 430 TNRVDVLDPALLRPGRFDRQIVVDGPDVKGRVKILEVHAKNKPIGEDVDLERIAKLTSGM 489
Query: 601 VGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGML--DRKER--SSETWRQVAI 656
GA+L N++ AA+ R + +I D++ ++ ER M +RK R + +T R +A
Sbjct: 490 TGADLMNLMNEAALLTARRNKDKIGMDEVNESM---ERLMAGPERKTRVLNEKTRRTIAY 546
Query: 657 NEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQ 716
+E+ A+V + + +TI PR G LGY D KF ++SR ++LD + V
Sbjct: 547 HESGHALVGHMLENADPVHKITIVPR-GMALGYTMSIPDEDKF---LVSRSAMLDELAVF 602
Query: 717 LAPRAADELWCGEGQLSTIWAETADNARSAARTFVLG-GLSD-----------------K 758
+ R A+E++CG+ ++T + + A AR V+ G+S+ +
Sbjct: 603 MGGRVAEEIFCGD--ITTGASNDLERATKTARKMVVSYGMSEALGQQTFGQPNHEVFLGR 660
Query: 759 HFGLSNFWVADRINEIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQE 817
+G + + + ID E R++ ++ A EIL + + + L+E++++ +E
Sbjct: 661 DYGNTQDYSPETAQRIDEEVARLMKEAHDTAYEILSARQEQMHTMAKVLLERETVDGEE 719
>sp|Q1AV13|FTSH_RUBXD ATP-dependent zinc metalloprotease FtsH OS=Rubrobacter xylanophilus
(strain DSM 9941 / NBRC 16129) GN=ftsH PE=3 SV=1
Length = 651
Score = 302 bits (773), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 178/422 (42%), Positives = 259/422 (61%), Gaps = 25/422 (5%)
Query: 421 YRRRGVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSL 480
+++ G RIP G LL GPPG GKTLLA+AVAGEAGV FFSIS S FVE++VGVGASRVR L
Sbjct: 214 FQKLGARIPKGALLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDL 273
Query: 481 YQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIAS 540
+++AK N+P ++F+DE+DAVGR+RG G G ER+ TLNQLLV +DGF+ + +I +A+
Sbjct: 274 FEQAKQNSPCIIFVDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFDSKSGIIMLAA 333
Query: 541 TNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGM 600
TNRPDILDPAL+RPGRFDR+I + +P L GR++ILKVH R KP+ +DVD +A T G
Sbjct: 334 TNRPDILDPALLRPGRFDRQIVVDRPDLPGRIKILKVHTRGKPLGEDVDIETIARGTPGF 393
Query: 601 VGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQV-AINEA 659
GA+LAN+V AA+ R + +I ++ +A G + SE +++ A +EA
Sbjct: 394 TGADLANLVNEAALLAARHNKEQIEMAEMEEAIDRVIAGPERKTRLISEKEKEITAYHEA 453
Query: 660 AMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAP 719
A+V P+ + VTI PR G+ LG + +F M+SR L+ ++ L
Sbjct: 454 GHAIVGALLPEADPVHKVTIIPR-GQALGVTMSLPEEDRF---MMSRAQLMAQLSYMLGG 509
Query: 720 RAADELWCGEGQLSTIWAETADNARSAARTFVL-GGLSDK----HFGLSNFWV------- 767
RAA+ + E ++T + + A AR V G+S+K G + V
Sbjct: 510 RAAERVVFEE--ITTGASNDIERATKVARQMVTRYGMSEKLGLIALGQHDGQVFMGRDLH 567
Query: 768 -----ADRIN-EIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHL 821
+D I +ID E R+++ Y+ A+++L RNR LL+ + ++L+E +++ + L
Sbjct: 568 AQPDYSDEIAFQIDKEIRRLVDEAYDTAEDLLVRNRRLLEKLASDLIEYETVDAEHLRRL 627
Query: 822 VE 823
VE
Sbjct: 628 VE 629
>sp|P37476|FTSH_BACSU ATP-dependent zinc metalloprotease FtsH OS=Bacillus subtilis
(strain 168) GN=ftsH PE=1 SV=1
Length = 637
Score = 301 bits (772), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 188/433 (43%), Positives = 256/433 (59%), Gaps = 31/433 (7%)
Query: 416 KFSDMYRRRGVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGAS 475
KF+++ G RIP G+LL GPPG GKTLLAKA AGEAGV FFSIS S FVE++VGVGAS
Sbjct: 185 KFAEL----GARIPKGVLLVGPPGTGKTLLAKACAGEAGVPFFSISGSDFVEMFVGVGAS 240
Query: 476 RVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNV 535
RVR L++ AK NAP ++FIDE+DAVGR+RG G G ER+ TLNQLLV +DGF +
Sbjct: 241 RVRDLFENAKKNAPCLIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGI 300
Query: 536 ITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVAS 595
I IA+TNR DILDPAL+RPGRFDR+I + +P +IGR +LKVHAR KP+ + V+ ++A
Sbjct: 301 IIIAATNRADILDPALLRPGRFDRQITVDRPDVIGREAVLKVHARNKPLDETVNLKSIAM 360
Query: 596 MTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQ-V 654
T G GA+L N++ AA+ R + +I D+ +A G + S+ R V
Sbjct: 361 RTPGFSGADLENLLNEAALVAARQNKKKIDARDIDEATDRVIAGPAKKSRVISKKERNIV 420
Query: 655 AINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHIT 714
A +E V+ + + + VTI PR G+ GY M ++ + ++ LLD I
Sbjct: 421 AYHEGGHTVIGLVLDEADMVHKVTIVPR-GQAGGYAVMLPREDRYFQ---TKPELLDKIV 476
Query: 715 VQLAPRAADELWCGEGQLSTIWAETADNARSAARTFVLG-GLSDK----HFGLSN----F 765
L R A+E+ GE +ST A + AR V G+S+K FG S F
Sbjct: 477 GLLGGRVAEEIIFGE--VSTGAHNDFQRATNIARRMVTEFGMSEKLGPLQFGQSQGGQVF 534
Query: 766 WVADRIN----------EIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTK 815
D N EID E RI+ CYERAK+IL NR+ L+ + L++ ++L
Sbjct: 535 LGRDFNNEQNYSDQIAYEIDQEIQRIIKECYERAKQILTENRDKLELIAQTLLKVETLDA 594
Query: 816 QEFFHLVELHGSL 828
++ HL++ HG+L
Sbjct: 595 EQIKHLID-HGTL 606
>sp|B4U7U4|FTSH_HYDS0 ATP-dependent zinc metalloprotease FtsH OS=Hydrogenobaculum sp.
(strain Y04AAS1) GN=ftsH PE=3 SV=1
Length = 636
Score = 301 bits (771), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 183/430 (42%), Positives = 258/430 (60%), Gaps = 36/430 (8%)
Query: 421 YRRRGVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSL 480
+R+ G R P GIL G PGVGKTLLAKA+AGEA V F S+S S FVE++VGVGA+R+R
Sbjct: 188 FRKLGGRPPKGILFYGEPGVGKTLLAKALAGEAHVPFISVSGSDFVEMFVGVGAARMRDT 247
Query: 481 YQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIAS 540
++ A+ NAP +VFIDE+DAVGR RG I G ER+ TLNQLLV +DGF+ ++ IA+
Sbjct: 248 FETARKNAPCIVFIDEIDAVGRSRGAINLGGNDEREQTLNQLLVEMDGFDTSEGILIIAA 307
Query: 541 TNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGM 600
TNRPDILDPAL+RPGRFDR+IFIPKP + GR EILKVHA+ KP+A DVD +A T G
Sbjct: 308 TNRPDILDPALLRPGRFDRQIFIPKPDVKGRYEILKVHAKNKPLAKDVDLELIARATPGF 367
Query: 601 VGAELANIVEVAAINMMRDGRTEITTDDLLQAAQ-----IEERGM-LDRKERSSETWRQV 654
GA+L NI+ AA+ R + I +DL +A +E RGM + KE+ ++
Sbjct: 368 TGADLENILNEAALLAARKRKDLIHMEDLEEAIDRVMMGLERRGMAISPKEK-----EKI 422
Query: 655 AINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGY-VRMKMD--HMKFKEGMLSRQSLLD 711
A++EA A++ + PD + V+I PR G LG ++ +D H+ K +LSR
Sbjct: 423 AVHEAGHALMGLMMPDADPLHKVSIIPR-GMALGVTTQLPIDDKHIYDKADLLSR----- 476
Query: 712 HITVQLAPRAADELWCGEGQLSTIWAETADNARSAA-RTFVLGGLSDKHFGLS-----NF 765
I + + R A+E++ G+ ++T A A R G+S+ +S N
Sbjct: 477 -IHILMGGRCAEEVFYGKDGITTGAENDLQRATDLAYRIVATWGMSENVGPISVRRNINP 535
Query: 766 WVA---------DRINEIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQ 816
++ D + EID E ++L YE K ++ N+ L +VV L+EK+++ +
Sbjct: 536 FLGGSTVTEGSPDLLKEIDKEVQKLLASAYEETKRVIAENKEALSSVVKRLIEKETIDCK 595
Query: 817 EFFHLVELHG 826
EF ++ LHG
Sbjct: 596 EFVEILSLHG 605
>sp|A8F7F7|FTSH_THELT ATP-dependent zinc metalloprotease FtsH OS=Thermotoga lettingae
(strain ATCC BAA-301 / DSM 14385 / TMO) GN=ftsH PE=3
SV=1
Length = 626
Score = 300 bits (769), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 181/395 (45%), Positives = 240/395 (60%), Gaps = 26/395 (6%)
Query: 421 YRRRGVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSL 480
+ + G R+P GILL GPPG GKTLLA+AVAGEA V FF IS S FVE++VGVGA+RVR L
Sbjct: 187 FSKIGARMPKGILLVGPPGTGKTLLARAVAGEANVPFFHISGSDFVELFVGVGAARVRDL 246
Query: 481 YQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIAS 540
+ +AK NAP +VFIDE+DAVGR RG G G ER+ TLNQLLV +DGF+ R ++ +A+
Sbjct: 247 FNQAKANAPCIVFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFDVRQGIVVMAA 306
Query: 541 TNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGM 600
TNRPDILDPAL+RPGRFD+K+ + P + GR EILK+HAR KP+A+DVD +A T G
Sbjct: 307 TNRPDILDPALLRPGRFDKKVVLDTPDVRGREEILKIHARNKPIAEDVDIRVLAQRTTGF 366
Query: 601 VGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINE 658
VGA+L N+V AA+ R+GR +I +D +A G RK R S R VA +E
Sbjct: 367 VGADLENLVNEAALLAARNGRDKIKMEDFEEAIDRVIAGPA-RKSRVISPREKRIVAYHE 425
Query: 659 AAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLA 718
A+V+ P+ + ++I PR R LGY ++ ++++Q LLD IT L
Sbjct: 426 VGHAIVSSLLPNADPVHRISIIPRGYRALGYTLQLPAEDRY---LVTKQELLDQITGLLG 482
Query: 719 PRAADELWCGEGQLSTIWAETADNARSAARTFVLG-GLSDKHFGLS-------------- 763
RAA+EL E ++T A + A AR V G+SDK LS
Sbjct: 483 GRAAEELIFQE--VTTGAASDIERATELARRMVCQFGMSDKLGPLSWGKTEQEIFLGKEL 540
Query: 764 ---NFWVADRINEIDTEALRILNLCYERAKEILQR 795
+ + +EID E +I+ Y+RAKEIL +
Sbjct: 541 TRMRNYSEEVASEIDEEVRKIVTESYDRAKEILTK 575
>sp|Q67JH0|FTSH3_SYMTH ATP-dependent zinc metalloprotease FtsH 3 OS=Symbiobacterium
thermophilum (strain T / IAM 14863) GN=ftsH3 PE=3 SV=1
Length = 626
Score = 300 bits (768), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 179/418 (42%), Positives = 247/418 (59%), Gaps = 24/418 (5%)
Query: 415 VKFSDMYRRRGVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGA 474
+K Y G RIP G+LL GPPG GKTLLAKAVAGEAGV FFSIS S FVE++VGVGA
Sbjct: 176 LKHPKRYLELGARIPKGVLLYGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGA 235
Query: 475 SRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGN 534
SRVR L+++AK N+P +VFIDE+DAVGR+RG G G ER+ TLNQLLV +DGF
Sbjct: 236 SRVRDLFEQAKKNSPCIVFIDEIDAVGRQRGAGYGGGHDEREQTLNQLLVEMDGFSANEG 295
Query: 535 VITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVA 594
+I IA+TNRPD+LDPAL+RPGRFDR+I I +P L GR+ I +VHA+ KP+ DVD +A
Sbjct: 296 IIIIAATNRPDVLDPALLRPGRFDRQIVIDRPDLKGRLAIFQVHAKGKPLEPDVDLEVLA 355
Query: 595 SMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SSETWR 652
T G GA++AN++ AA+ R + +I+ D+ A G ++K R S + R
Sbjct: 356 KRTPGFTGADIANLMNEAALLAARRRKKKISMQDVEDAIDRVLAGGPEKKSRVISEKEKR 415
Query: 653 QVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDH 712
A +EA AVV P + + +TI PR GR +GY ++ +S+ +LD
Sbjct: 416 VTAYHEAGHAVVGHMLPHMDPLHKITIIPR-GRAMGYTLFLPVEDRYN---ISKSEILDR 471
Query: 713 ITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFVLGGLSDKHFGLSNFWVADRI- 771
+T+ L RAA+E+ GE S + + A R G+S+K L+ D +
Sbjct: 472 MTMALGGRAAEEITFGE-ITSGAQDDIERTTQWARRMVTEWGMSEKLGPLTYGMKQDEVF 530
Query: 772 ----------------NEIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSL 813
ID E + +++ Y+RA +IL +R+ L+ V L+EK++L
Sbjct: 531 LARDMTRLRNYSEEVAGLIDEEVRKFVHMAYQRAIDILTEHRDALEKVSEVLLEKETL 588
>sp|B0K5A3|FTSH1_THEPX ATP-dependent zinc metalloprotease FtsH 1 OS=Thermoanaerobacter sp.
(strain X514) GN=ftsH1 PE=3 SV=1
Length = 611
Score = 298 bits (764), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 185/423 (43%), Positives = 247/423 (58%), Gaps = 25/423 (5%)
Query: 415 VKFSDMYRRRGVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGA 474
+K+ + G RIP G+LL GPPG GKTLLAKAVAGEAGV FFSIS S FVE++VGVGA
Sbjct: 180 LKYPKKFLELGARIPKGVLLVGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGA 239
Query: 475 SRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGN 534
+RVR L+ +AK NAP +VFIDE+DAVGR+RG G G ER+ TLNQLLV +DGF
Sbjct: 240 ARVRDLFDQAKKNAPCIVFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFSVNEG 299
Query: 535 VITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVA 594
+I IA+TNRPDILDPAL+RPGRFDR I + P + GR EILK+H+R KP+A DV +A
Sbjct: 300 IIVIAATNRPDILDPALLRPGRFDRHITVGIPDIKGREEILKIHSRNKPLAPDVSLQVLA 359
Query: 595 SMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQ- 653
T G GA+L N++ AA+ R G +IT +L +A G R SE ++
Sbjct: 360 RRTPGFTGADLENLMNEAALLAARRGLKQITMAELEEAITRVIAGPEKRSRIMSEKDKKL 419
Query: 654 VAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHI 713
VA +EA AVVA P+ + VTI PR GR GY + + K+ +S+ ++D I
Sbjct: 420 VAYHEAGHAVVAKLLPNTPPVHEVTIIPR-GRAGGYTMLLPEEDKY---YMSKSEMMDEI 475
Query: 714 TVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFV--------LGGLS--------- 756
L R A+ L + +ST + A + AR V LG ++
Sbjct: 476 VHLLGGRVAESLVLND--ISTGAQNDIERATNIARKMVTEYGMSERLGPMTFGTKSEEVF 533
Query: 757 -DKHFGLSNFWVADRINEIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTK 815
+ G + + + EID E RI+ Y+RA+ +L+ N + L V L+EK+ L
Sbjct: 534 LGRDLGRTRNYSEEVAAEIDREIKRIIEEAYKRAESLLKENIDKLHRVAKALIEKEKLNG 593
Query: 816 QEF 818
+EF
Sbjct: 594 EEF 596
>sp|P49825|FTSH_ODOSI ATP-dependent zinc metalloprotease FtsH OS=Odontella sinensis
GN=ftsH PE=3 SV=1
Length = 644
Score = 297 bits (761), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 184/490 (37%), Positives = 270/490 (55%), Gaps = 59/490 (12%)
Query: 376 GEAEQNPHLKMAMQFMKSGARVRRAYGKGLPQYLERGVD------------VKFSDMYRR 423
G + Q+P M KS AR R G+ G+D +K D Y
Sbjct: 159 GGSGQSP-----MSLGKSTARFERRPDTGVSFKDIAGIDEAKTEFEEIVSFLKEPDKYTI 213
Query: 424 RGVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQE 483
G +IP GILL GPPG GKTLLAKA+A EA V FFS++ S+FVE+++G+GA+RVR L+++
Sbjct: 214 VGAKIPKGILLVGPPGTGKTLLAKAIANEADVPFFSVAGSEFVEMFIGIGAARVRDLFKK 273
Query: 484 AKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNR 543
A +NAP +VFIDE+DAVGRERG G G ER+ TLNQLL +DGF+ VI + +TNR
Sbjct: 274 ASENAPCIVFIDEIDAVGRERGAGVGGGNDEREQTLNQLLTEMDGFKENKGVIVVGATNR 333
Query: 544 PDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGA 603
DILD AL+RPGRFDR++ + P +GR+ ILKVHAR KP+ +DV + +A+ T G GA
Sbjct: 334 ADILDAALLRPGRFDRQVTVNLPDRLGRVGILKVHARNKPLGEDVSLVQLANRTPGFSGA 393
Query: 604 ELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQVAINEAAMAV 663
+LAN++ AAI R ++ IT +++ +AA G+ ++ R +A +E A+
Sbjct: 394 DLANLLNEAAILATRYKKSSITKNEVNEAADRIIGGIAGAPMEDTKNKRLIAYHEVGHAI 453
Query: 664 VAVNFPDLKNIEFVTIAPRAG-RELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAA 722
+E +T+ PR G + L + + D + +LSR +LL I L RAA
Sbjct: 454 TGSVLKSHDEVEKITLTPRGGAKGLTWFTPEED-----QSLLSRSALLARIITTLGGRAA 508
Query: 723 DELWCGEGQLSTIWAETADNARSAARTFVLGGLSDKHFGLSNFW---------------- 766
+++ GE +++T + + AR V FG+SN
Sbjct: 509 EQVIFGEPEVTTGASSDLQQVTNLARQMV------TRFGMSNIGPLALEDESTGQVFLGG 562
Query: 767 -----------VADRINEIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTK 815
+ADR ID E +I+ CYE+A EI+ NR ++D +V +L++K+++
Sbjct: 563 NMASGSEYAENIADR---IDDEVRKIITYCYEKAIEIVLDNRVVIDLIVEKLLDKETMDG 619
Query: 816 QEFFHLVELH 825
EF L+ +
Sbjct: 620 DEFRELLSTY 629
>sp|P94304|FTSH_BACPE ATP-dependent zinc metalloprotease FtsH OS=Bacillus pseudofirmus
(strain OF4) GN=ftsH PE=3 SV=2
Length = 679
Score = 297 bits (760), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 184/424 (43%), Positives = 245/424 (57%), Gaps = 38/424 (8%)
Query: 425 GVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEA 484
G RIP G+LL GPPG GKTLLA+AVAGEAGV FFSIS S FVE++VGVGASRVR L++ A
Sbjct: 195 GARIPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENA 254
Query: 485 KDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRP 544
K NAP ++FIDE+DAVGR+RG G G ER+ TLNQLLV +DGF +I IA+TNR
Sbjct: 255 KKNAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRA 314
Query: 545 DILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAE 604
DILDPAL+RPGRFDR+I + +P + GR E+LKVHAR KP+ DDV+ +A+ T G GA+
Sbjct: 315 DILDPALLRPGRFDRQIQVNRPDVNGREEVLKVHARNKPLNDDVNLKTIATRTPGFSGAD 374
Query: 605 LANIVEVAAINMMRDGRTEIT------TDDLLQAAQIEERGMLDRKERSSETWRQVAINE 658
L N++ AA+ R T+I+ D + A ++ ++ KE+ W +E
Sbjct: 375 LENLLNEAALVAARHDHTKISMIHIEEAIDRVIAGPAKKSRVISPKEKKIVAW-----HE 429
Query: 659 AAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLA 718
A VV V + + VTI PR G GY M ++ +++ LLD I L
Sbjct: 430 AGHTVVGVKLENADMVHKVTIVPR-GMAGGYAVMLPKEDRY---FMTQPELLDKIIGLLG 485
Query: 719 PRAADELWCGEGQLSTIWAETADNARSAARTFVLG-GLSDKHFGLSNFW----------- 766
R A+E+ GE +ST A AR V G+S+K G F
Sbjct: 486 GRVAEEVTFGE--VSTGAHNDFQRATGIARKMVTEYGMSEK-LGPMQFISGSGGQVFLGR 542
Query: 767 -------VADRI-NEIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEF 818
+D I +EID E RI+ CY R K+IL N++ LD V L++ ++L ++
Sbjct: 543 DIQNEQNYSDAIAHEIDLEVQRIIKECYARCKQILLENKDSLDLVAKTLLDMETLDAEQI 602
Query: 819 FHLV 822
LV
Sbjct: 603 KSLV 606
>sp|A0LN68|FTSH_SYNFM ATP-dependent zinc metalloprotease FtsH OS=Syntrophobacter
fumaroxidans (strain DSM 10017 / MPOB) GN=ftsH PE=3 SV=1
Length = 647
Score = 296 bits (758), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 182/435 (41%), Positives = 263/435 (60%), Gaps = 30/435 (6%)
Query: 421 YRRRGVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSL 480
++R G RIP G+LL G PG GKTLLAKAVAGEAGV FFS+S S+FVE++VGVGA+RVR L
Sbjct: 212 FQRLGGRIPKGVLLVGAPGTGKTLLAKAVAGEAGVPFFSMSGSEFVEMFVGVGAARVRDL 271
Query: 481 YQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIAS 540
+ +AKD+AP ++FIDELDA+G+ RGL G ER+ TLNQLLV +DGF+ R VI +A+
Sbjct: 272 FGQAKDHAPCIIFIDELDALGKARGLNPIGGHDEREQTLNQLLVEMDGFDPRSGVIIMAA 331
Query: 541 TNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGM 600
TNRP+ILDPAL+RPGRFDR + I KP + GR IL+VH ++ + +VD +A MT G
Sbjct: 332 TNRPEILDPALLRPGRFDRHVAIDKPDIRGREAILRVHVKEVKLGSEVDLKKIAGMTPGF 391
Query: 601 VGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQ--VAINE 658
VGA+LAN+V AA+ R R E+T D +AA G L++K R+ + VA +E
Sbjct: 392 VGADLANLVNEAALVAARRDRDEVTMADFQEAAD-RIIGGLEKKNRAMNPKEKEIVAYHE 450
Query: 659 AAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLA 718
A A+VA+ P++ + V+I PR LGY + ++ +++R LLD + V L
Sbjct: 451 AGHALVAMLLPNVDPVNKVSIIPRGIAALGYTQQLPTEDRY---LMTRNELLDRLQVLLG 507
Query: 719 PRAADELWCGEGQLSTIWAETADNARSAARTFVLG-GLSDKHFGLS----------NFWV 767
R ++E+ G+ +ST A AR+ V+ G+S++ L+ + +
Sbjct: 508 GRVSEEIIFGD--VSTGAQNDLQRATDIARSMVMEYGMSERLGPLTYTRDPRSAHLDLGL 565
Query: 768 ADR--------INEIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQE-- 817
R EID E RI+ +E+ + L+R R L+ + L+EK+S+ +E
Sbjct: 566 GSRERDYSEMIAQEIDEEITRIVEDAHEKVRATLKRERGCLEKLAKILLEKESIDGEELK 625
Query: 818 -FFHLVELHGSLEPM 831
F V+ H + +P+
Sbjct: 626 QFCQEVKSHIARDPV 640
>sp|D3F124|FTSH1_CONWI ATP-dependent zinc metalloprotease FtsH 1 OS=Conexibacter woesei
(strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577)
GN=ftsH1 PE=3 SV=1
Length = 653
Score = 295 bits (755), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 183/429 (42%), Positives = 258/429 (60%), Gaps = 39/429 (9%)
Query: 421 YRRRGVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSL 480
++ G RIP G+LL GPPG GKTLLA+AVAGEAGV FFSIS S FVE++VGVGASRVR L
Sbjct: 183 FQALGARIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDL 242
Query: 481 YQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIAS 540
+++AK NAP ++F+DE+DAVGR RG G G ER+ TLNQLLV +DGFE + N+I IA+
Sbjct: 243 FEQAKQNAPCIIFMDEIDAVGRHRGAGMGGGHDEREQTLNQLLVEMDGFEAKDNIIMIAA 302
Query: 541 TNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGM 600
TNRPDILDPAL+RPGRFDR++ + +P GR +IL+VH R KP+A ++D A+A T G
Sbjct: 303 TNRPDILDPALLRPGRFDRQVTVDRPDRKGRSKILEVHTRGKPLAREIDIDALAGQTPGF 362
Query: 601 VGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGML------DRKER--SSETWR 652
GA+LAN+V AA+ R G+ EIT +L E G++ ++K R SSE R
Sbjct: 363 TGADLANLVNEAALLAARTGKREITQVEL-------EEGIMRVIAGPEKKTRVMSSEERR 415
Query: 653 QVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDH 712
A +E A+V + +++ R G+ LGY KF + +R +L D
Sbjct: 416 ITAYHEMGHALVGHFLEHADPVHKISVIGR-GQALGYTISMPQEDKF---LTTRAALGDT 471
Query: 713 ITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFVL-GGLSDKH----FGL----- 762
+ + L RAA+E+ GE ++T + + A+ V+ G+S+K FG
Sbjct: 472 MAMTLGGRAAEEIIFGE--ITTGASNDLEKVTGTAKQMVMRFGMSEKLGPRVFGHDQSQP 529
Query: 763 -------SNFWVADRI-NEIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLT 814
S +D I EID E RI+ ++ AK+IL +R L + L++++++
Sbjct: 530 FLGREFSSQADYSDEIAREIDDEIRRIVETAHQSAKDILTEHRESLVYISEILIKRETIE 589
Query: 815 KQEFFHLVE 823
K +F LV+
Sbjct: 590 KDQFEALVD 598
>sp|B8G4Q6|FTSH_CHLAD ATP-dependent zinc metalloprotease FtsH OS=Chloroflexus aggregans
(strain MD-66 / DSM 9485) GN=ftsH PE=3 SV=1
Length = 656
Score = 295 bits (755), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 182/429 (42%), Positives = 253/429 (58%), Gaps = 25/429 (5%)
Query: 415 VKFSDMYRRRGVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGA 474
+KF D + G RIP G+L+ GPPG GKTLL++AVAGEAGV FFSIS S+FVE++VGVGA
Sbjct: 188 LKFPDKFAALGARIPRGVLMVGPPGTGKTLLSRAVAGEAGVPFFSISGSEFVEMFVGVGA 247
Query: 475 SRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGN 534
SRVR L+ +AK NAP +VFIDE+DAVGR+RG G ER+ TLNQ+LV +DGF+ N
Sbjct: 248 SRVRDLFDQAKRNAPCIVFIDEIDAVGRQRGAGLGGSHDEREQTLNQILVEMDGFDTNTN 307
Query: 535 VITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVA 594
VI IA+TNRPD+LDPALVRPGRFDR++ + P + GR+EILKVH + KP+A+DV+ +A
Sbjct: 308 VIVIAATNRPDVLDPALVRPGRFDRQVVLDAPDVRGRIEILKVHVKGKPLAEDVNLEILA 367
Query: 595 SMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQ- 653
T G GA+L N+V AAI R + +I+ + A + G +R+ R T RQ
Sbjct: 368 RQTPGFSGADLMNVVNEAAILAARRSKRKISMAEFQDAVERVAIGGPERRSRVM-TDRQK 426
Query: 654 --VAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLD 711
VA +EA A+V P ++ VTI PR G+ GY D +S+
Sbjct: 427 LVVAYHEAGHAIVGAALPKADKVQKVTIIPR-GQAGGYTLFLPDEDSLNLRTVSQ--FKA 483
Query: 712 HITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFVL-GGLSDKH----FGLSN-- 764
+ V L R A+E+ G +++T + AR V G+S + FG
Sbjct: 484 RLAVSLGGRVAEEIVFGNEEVTTGASGDLVQVTRIARAMVTRYGMSQRLGPIVFGEKEEL 543
Query: 765 FWVADRINE-----------IDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSL 813
++ I+E ID E I++ YE A++IL +NR +LD + N L+E ++L
Sbjct: 544 IFLGREISEQRNYGDEVARQIDEEVHAIVSEAYETAQQILLQNRAVLDDMANALIEYETL 603
Query: 814 TKQEFFHLV 822
++ L+
Sbjct: 604 DGEQLEELI 612
>sp|P73179|FTSH1_SYNY3 ATP-dependent zinc metalloprotease FtsH 1 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=ftsH1 PE=2 SV=1
Length = 665
Score = 295 bits (754), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 182/475 (38%), Positives = 267/475 (56%), Gaps = 33/475 (6%)
Query: 387 AMQFMKSGARVRRAYGKGLPQYLERGVD------------VKFSDMYRRRGVRIPGGILL 434
AM F KS AR + G+ G+D +K + + G +IP G+LL
Sbjct: 190 AMSFGKSKARFQMEAKTGVGFDDVAGIDEAKEELQEVVTFLKQPEKFTAIGAKIPRGVLL 249
Query: 435 CGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFI 494
GPPG GKTLLAKA+AGEAGV FFSIS S+FVE++VGVGASRVR L+++AK+NAP +VFI
Sbjct: 250 IGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLVFI 309
Query: 495 DELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRP 554
DE+DAVGR+RG+ G G ER+ TLNQLL +DGFEG +I IA+TNRPD+LD AL+RP
Sbjct: 310 DEIDAVGRQRGVGYGGGNDEREQTLNQLLTEMDGFEGNSGIIVIAATNRPDVLDLALLRP 369
Query: 555 GRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAI 614
GRFDR++ + P + GR IL +HA+ K + ++V A+A T G GA+LAN++ AAI
Sbjct: 370 GRFDRQVTVDYPDVQGRELILAIHAQNKKLHEEVQLAAIARRTPGFTGADLANVLNEAAI 429
Query: 615 NMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNI 674
R + IT ++ A GM S++ R +A +E A++ P +
Sbjct: 430 FTARRRKEAITMAEVNDAIDRVVAGMEGTPLVDSKSKRLIAYHEVGHALIGTLCPGHDPV 489
Query: 675 EFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLST 734
E VT+ PR G+ G D + +++R ++ I L R A+E+ G+ +++T
Sbjct: 490 EKVTLIPR-GQAQGLTWFTPDE---DQSLMTRNQMIARIAGLLGGRVAEEVIFGDDEVTT 545
Query: 735 IWAETADNARSAARTFV-------LGGLSDKHFGLSNF----------WVADRINEIDTE 777
+ AR V LG ++ + G NF + D ID E
Sbjct: 546 GAGNDIEKITYLARQMVTKLGMSSLGLVALEEEGDRNFSGGDWGKRSEYSEDIAARIDRE 605
Query: 778 ALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLVELHGSLEPMP 832
I+ ++RA I++ NRNL+D +V+ L++++++ + F LVE + + P
Sbjct: 606 IQAIVTAAHQRATRIIEENRNLMDLLVDALIDQETIEGEHFRQLVESYQQSQKQP 660
>sp|O19922|FTSH_CYACA ATP-dependent zinc metalloprotease FtsH OS=Cyanidium caldarium
GN=ftsH PE=3 SV=1
Length = 614
Score = 294 bits (752), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 177/433 (40%), Positives = 245/433 (56%), Gaps = 35/433 (8%)
Query: 415 VKFSDMYRRRGVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGA 474
+K S + G IP G+LL GPPG GKTLLAKA+AGEA FFSIS S+FVE++VGVGA
Sbjct: 190 LKDSRKFTNVGATIPKGVLLVGPPGTGKTLLAKAIAGEASAPFFSISGSEFVEMFVGVGA 249
Query: 475 SRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGN 534
SRVR L+++AK+ AP +VFIDE+DAVGR+RG+ G G ER+ TLNQLL +DGF G
Sbjct: 250 SRVRDLFKKAKEKAPCIVFIDEIDAVGRQRGVGIGGGNDEREQTLNQLLTEMDGFSGDTG 309
Query: 535 VITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVA 594
VI +A+TNR D+LD AL+RPGRFDR+I + P + GR+ ILKVH++KK + DV +A
Sbjct: 310 VIVVAATNRIDVLDSALLRPGRFDRQIMVSLPNINGRLAILKVHSKKKKIHKDVLLEVIA 369
Query: 595 SMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQV 654
T G GA+LAN++ AAI +R G+ EIT ++ + G+ S R +
Sbjct: 370 RRTPGFSGADLANLLNEAAILTVRRGKVEITMKEIEDSIDKIIAGLEGSPLADSRIKRLI 429
Query: 655 AINEAAMAVVAVNFPDLKNIEFVTIAP-RAGRELGYVRMKMDHMKFKEGMLSRQSLLDHI 713
A +EA AV A P ++ VT+ P R + L + D ++S+ +L I
Sbjct: 430 AYHEAGHAVAATFLPHHDPVQKVTLIPRRQAKGLTWFLPNDDQF-----LVSKSQILSKI 484
Query: 714 TVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFVLGGLSDKHFGLSNF-------- 765
LA RA +E+ G +++ A AR V FG+S
Sbjct: 485 IAALAGRAMEEIVFGLPEVTIGAANDIKQVTFMARQMV------TKFGMSKVGPICLENS 538
Query: 766 ---------------WVADRINEIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEK 810
+ + ++D E IL CY +A+ IL +NR L+D VVNELVEK
Sbjct: 539 SSEVFIGRDLMGRHELSEEMVAKVDLEVRSILKDCYIQARTILSQNRKLIDRVVNELVEK 598
Query: 811 KSLTKQEFFHLVE 823
+++ +EF +VE
Sbjct: 599 ETIEAKEFMRIVE 611
>sp|O69076|FTSH_STRPN ATP-dependent zinc metalloprotease FtsH OS=Streptococcus pneumoniae
serotype 4 (strain ATCC BAA-334 / TIGR4) GN=ftsH PE=3
SV=3
Length = 652
Score = 293 bits (749), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 179/422 (42%), Positives = 249/422 (59%), Gaps = 28/422 (6%)
Query: 421 YRRRGVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSL 480
+ + G RIP G+LL GPPG GKTLLAKAVAGEAGV FFSIS S FVE++VGVGASRVRSL
Sbjct: 212 FTKLGARIPAGVLLEGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRSL 271
Query: 481 YQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIAS 540
+++AK AP+++FIDE+DAVGR+RG+ G G ER+ TLNQLL+ +DGFEG +I IA+
Sbjct: 272 FEDAKKAAPAIIFIDEIDAVGRQRGVGLGGGNDEREQTLNQLLIEMDGFEGNEGIIVIAA 331
Query: 541 TNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGM 600
TNR D+LDPAL+RPGRFDRK+ + +P + GR ILKVHA+ KP+A+DVD VA T G
Sbjct: 332 TNRSDVLDPALLRPGRFDRKVLVGRPDVKGREAILKVHAKNKPLAEDVDLKLVAQQTPGF 391
Query: 601 VGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQ-VAINEA 659
VGA+L N++ AA+ R ++ I D+ +A G + + S+ R+ VA +EA
Sbjct: 392 VGADLENVLNEAALVAARRNKSIIDASDIDEAEDRVIAGPSKKDKTVSQKERELVAYHEA 451
Query: 660 AMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRM--KMDHMKFKEGMLSRQSLLDHITVQL 717
+V + + + + VTI PR GR GY+ K D M +LS++ + + + +
Sbjct: 452 GHTIVGLVLSNARVVHKVTIVPR-GRAGGYMIALPKEDQM-----LLSKEDMKEQLAGLM 505
Query: 718 APRAADELWCGEGQLSTIWAETA-DNARSAARTFVLG-GLSDK---------HFGLSNFW 766
R A+E+ + T A + A AR V G+S+K H L
Sbjct: 506 GGRVAEEIIF---NVQTTGASNDFEQATQMARAMVTEYGMSEKLGPVQYEGNHAMLGAQS 562
Query: 767 VADRIN-----EIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHL 821
I+ EID E +LN +A EI+Q NR + L++ ++L + L
Sbjct: 563 PQKSISEQTAYEIDEEVRSLLNEARNKAAEIIQSNRETHKLIAEALLKYETLDSTQIKAL 622
Query: 822 VE 823
E
Sbjct: 623 YE 624
>sp|B9MPK5|FTSH_CALBD ATP-dependent zinc metalloprotease FtsH OS=Caldicellulosiruptor
bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320)
GN=ftsH PE=3 SV=1
Length = 616
Score = 292 bits (748), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 189/421 (44%), Positives = 247/421 (58%), Gaps = 25/421 (5%)
Query: 421 YRRRGVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSL 480
Y G RIP GILL GPPG GKTLLAKAVAGEAGV FFSIS S FVE++VGVGA+RVR L
Sbjct: 193 YIELGARIPKGILLVGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGAARVRDL 252
Query: 481 YQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIAS 540
+ +AK NAP VVFIDE+DAVGR RG G G ER+ TLNQLLV +DGF +I +A+
Sbjct: 253 FDQAKRNAPCVVFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFGTNEGIIVMAA 312
Query: 541 TNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGM 600
TNRPDILDPAL+RPGRFDR+I + P R EILKVHAR KP+ +DVD +A +T G
Sbjct: 313 TNRPDILDPALLRPGRFDRQIVVNVPDAKAREEILKVHARNKPLGEDVDLSQIAKITAGF 372
Query: 601 VGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQV-AINEA 659
GA+L N++ AA+ R G+ +I +++ +A G R +E +++ A +EA
Sbjct: 373 TGADLENLLNEAALLAARKGKRQINMEEVQEAVAKVLMGPEKRSRVYTEKEKKLTAYHEA 432
Query: 660 AMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAP 719
A+V PD + + V+I PR G GY KF S+ ++ I L
Sbjct: 433 GHAIVRTMIPDSEPVHEVSIIPR-GYAGGYTMYLPKEDKF---YASKSDMMREIVTLLGG 488
Query: 720 RAADELWCGEGQLSTIWAETADNARSAARTFVLG-GLSDK----HFG------------- 761
R A++L + +ST A A AR V G+SDK FG
Sbjct: 489 RVAEKLVLED--VSTGAASDIKRATKIARDMVTKYGMSDKLGPMTFGTEQEEVFLGRDLA 546
Query: 762 LSNFWVADRINEIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHL 821
L+ + + EID E I+ Y++A+EIL++N + L V N L+EK+ LT +EF L
Sbjct: 547 LARNYSEEVAAEIDREIKSIIEEAYKKAEEILKQNIDKLHKVANALLEKEKLTGEEFRKL 606
Query: 822 V 822
V
Sbjct: 607 V 607
>sp|P59652|FTSH_STRR6 ATP-dependent zinc metalloprotease FtsH OS=Streptococcus pneumoniae
(strain ATCC BAA-255 / R6) GN=ftsH PE=3 SV=1
Length = 652
Score = 292 bits (748), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 179/422 (42%), Positives = 249/422 (59%), Gaps = 28/422 (6%)
Query: 421 YRRRGVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSL 480
+ + G RIP G+LL GPPG GKTLLAKAVAGEAGV FFSIS S FVE++VGVGASRVRSL
Sbjct: 212 FTKLGARIPAGVLLEGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRSL 271
Query: 481 YQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIAS 540
+++AK AP+++FIDE+DAVGR+RG+ G G ER+ TLNQLL+ +DGFEG +I IA+
Sbjct: 272 FEDAKKAAPAIIFIDEIDAVGRQRGVGLGGGNDEREQTLNQLLIEMDGFEGNEGIIVIAA 331
Query: 541 TNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGM 600
TNR D+LDPAL+RPGRFDRK+ + +P + GR ILKVHA+ KP+A+DVD VA T G
Sbjct: 332 TNRSDVLDPALLRPGRFDRKVLVGRPDVKGREAILKVHAKNKPLAEDVDLKLVAQQTPGF 391
Query: 601 VGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQ-VAINEA 659
VGA+L N++ AA+ R ++ I D+ +A G + + S+ R+ VA +EA
Sbjct: 392 VGADLENVLNEAALVAARRNKSIIDASDIDEAEDRVIAGPSKKDKTVSQKERELVAYHEA 451
Query: 660 AMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRM--KMDHMKFKEGMLSRQSLLDHITVQL 717
+V + + + + VTI PR GR GY+ K D M +LS++ + + + +
Sbjct: 452 GHTIVGLVLSNARVVHKVTIVPR-GRAGGYMIALPKEDQM-----LLSKEDMKEQLAGLM 505
Query: 718 APRAADELWCGEGQLSTIWAETA-DNARSAARTFVLG-GLSDK---------HFGLSNFW 766
R A+E+ + T A + A AR V G+S+K H L
Sbjct: 506 GGRVAEEIIF---NVQTTGASNDFEQATQMARAMVTEYGMSEKLGPVQYEGNHAMLGAQS 562
Query: 767 VADRIN-----EIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHL 821
I+ EID E +LN +A EI+Q NR + L++ ++L + L
Sbjct: 563 PQKSISEQTAYEIDEEVRSLLNEARNKAAEIIQSNRETHKLIAEALLKYETLDSTQIKAL 622
Query: 822 VE 823
E
Sbjct: 623 YE 624
>sp|P51327|FTSH_PORPU ATP-dependent zinc metalloprotease FtsH OS=Porphyra purpurea
GN=ftsH PE=3 SV=1
Length = 628
Score = 292 bits (747), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 175/422 (41%), Positives = 251/422 (59%), Gaps = 33/422 (7%)
Query: 425 GVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEA 484
G +IP G+LL GPPG GKTLLAKA+AGEAGV FFSIS S+FVE++VGVGASRVR L+++A
Sbjct: 202 GAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKA 261
Query: 485 KDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRP 544
KDNAP +VFIDE+DAVGR+RG G G ER+ TLNQLL +DGFEG VI IA+TNR
Sbjct: 262 KDNAPCIVFIDEIDAVGRQRGTGVGGGNDEREQTLNQLLTEMDGFEGNTGVIVIAATNRA 321
Query: 545 DILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAE 604
DILD AL+RPGRFDR++ + P GR+ IL+VHA+ K M V +A T G GA+
Sbjct: 322 DILDSALLRPGRFDRQVSVDVPDFRGRLAILEVHAKNKKMESKVSLETIARRTPGFSGAD 381
Query: 605 LANIVEVAAINMMRDGRTEITTDDLLQA-----AQIEERGMLDRKERSSETWRQVAINEA 659
LAN++ AAI R ++ +T ++ + A +E ++D K + R +A +E
Sbjct: 382 LANLLNEAAILTARRRKSAMTMSEIDTSIDRVVAGLEGTPLIDSKSK-----RLIAYHEV 436
Query: 660 AMAVVAVNFPDLKNIEFVTIAPRA-GRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLA 718
A++ ++ VT+ PR R L + D + ++SR +L I L
Sbjct: 437 GHAIIGSLLEHHDPVQKVTLIPRGQARGLTWFTPSDD-----QSLISRSQILARIVGALG 491
Query: 719 PRAADELWCGEGQLSTIWAETADNARSAARTFV-------LGGLSDKHFGLSNFW----- 766
RAA+E+ G+ +++T + S AR V +G LS + G F
Sbjct: 492 GRAAEEIIFGDAEVTTGASNDLQQVTSMARQMVTRFGMSKIGPLSLESQGSDPFLGRGMG 551
Query: 767 ----VADRI-NEIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHL 821
+D + ID + I++ CY+ AK+I++ NR ++D +V+ L+EK+++ EF H+
Sbjct: 552 GGSEYSDEVATNIDKQVREIVSECYKEAKKIVKDNRVVMDRLVDLLIEKETIEGNEFRHI 611
Query: 822 VE 823
V+
Sbjct: 612 VK 613
>sp|Q0TTK8|FTSH_CLOP1 ATP-dependent zinc metalloprotease FtsH OS=Clostridium perfringens
(strain ATCC 13124 / NCTC 8237 / Type A) GN=ftsH PE=3
SV=1
Length = 717
Score = 291 bits (746), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 169/420 (40%), Positives = 262/420 (62%), Gaps = 26/420 (6%)
Query: 421 YRRRGVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSL 480
Y G ++P G LL GPPG GKTLLAKAVAGEA V FFS+S S FVE++VG+GA+RVR L
Sbjct: 191 YVEIGAKLPKGALLVGPPGTGKTLLAKAVAGEAKVPFFSMSGSDFVEMFVGMGAARVRDL 250
Query: 481 YQEAKDNAPSVVFIDELDAVGRER-GLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIA 539
+++A++ AP +VFIDE+DA+G+ R G I+G+ ER+ TLNQLL +DGF+ V+ +A
Sbjct: 251 FKQAEEKAPCIVFIDEIDAIGKSRDGAIQGN--DEREQTLNQLLTEMDGFDSSKGVVILA 308
Query: 540 STNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDG 599
+TNRP++LD AL+RPGRFDR+I + +P LIGR EILKVH+R ++DDV +A T G
Sbjct: 309 ATNRPEVLDKALLRPGRFDRRIIVDRPDLIGREEILKVHSRDVKLSDDVSLEEIAKSTPG 368
Query: 600 MVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAIN 657
VGA+LANIV AA+ ++ GR + +DL +A ++ G ++++R S + + VA +
Sbjct: 369 AVGADLANIVNEAALRAVKHGRKFVIQEDLDEAVEVIIAGQ-EKRDRILSPKEKKIVAYH 427
Query: 658 EAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQL 717
E A+VA + + +TI PR LGY + K+ ++S++ ++D I+V L
Sbjct: 428 EVGHALVAALLNNTDPVHKITIVPRTMGALGYTMQLPEEEKY---LVSKEEMIDQISVML 484
Query: 718 APRAADELWCGEGQLSTIWAETADNARSAARTFV-LGGLSDKHF-----GLSNFWVADR- 770
RAA+E+ ++T + + A +AR + + G+S++ +SN ++ R
Sbjct: 485 GGRAAEEVVF--NSITTGASNDIERATQSARNMITIYGMSERFDMMALEAMSNRYLDGRP 542
Query: 771 ---INEI-----DTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLV 822
+E D E L+++ +E++ +IL NR LLD + L++K+++ EF +V
Sbjct: 543 VRNCSETTAAIADEEVLQVIKKAHEKSIKILIENRELLDEITGVLLDKETIMGDEFMEIV 602
>sp|B9L3S8|FTSH2_THERP ATP-dependent zinc metalloprotease FtsH 2 OS=Thermomicrobium roseum
(strain ATCC 27502 / DSM 5159 / P-2) GN=ftsH2 PE=3 SV=1
Length = 699
Score = 291 bits (746), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 180/411 (43%), Positives = 240/411 (58%), Gaps = 24/411 (5%)
Query: 421 YRRRGVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSL 480
Y R G R+P G+LL GPPG GKTLLA+AVAGEAGV FFS+SAS+FVE++VGVGASRVR L
Sbjct: 276 YHRIGARLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASEFVEMFVGVGASRVRDL 335
Query: 481 YQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIAS 540
++ AK APS++FIDELDAVGR+R G G ER+ TLNQLLV +DGFE +V+ IA+
Sbjct: 336 FERAKAQAPSIIFIDELDAVGRQRFAGLGVGNDEREQTLNQLLVEMDGFEAHTDVVVIAA 395
Query: 541 TNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGM 600
TNRPD+LDPAL+RPGRFDR++ + P GR IL++H R P+A DVD +A+ T G
Sbjct: 396 TNRPDVLDPALLRPGRFDRQVVVGLPDKRGRAAILRIHTRGIPIAPDVDLEGLAAATPGF 455
Query: 601 VGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQVAINEAA 660
GA+LAN+V AA+ R G+ + D +A G S E R VA +EA
Sbjct: 456 SGADLANLVNEAALVAARRGKQVVDRSDFEEALDKMLLGTTRSLLMSQEERRLVAYHEAG 515
Query: 661 MAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPR 720
AVVA P + ++I PR GR LG + +F +R LL + V L R
Sbjct: 516 HAVVAYFTPGADPLRKISIVPR-GRALGVTVQAPEEDRFN---YTRNQLLGRLAVLLGGR 571
Query: 721 AADELWCGEGQLSTIWAETADNARSAARTFV--------LG----GLSDKHFGLSNFWVA 768
AA++L E ++T A AR V LG GL ++H L V
Sbjct: 572 AAEQLVFHE--VTTGAQNDLKEATQLARRMVGLWGMSEELGPIYLGLGEQHVFLGREIVQ 629
Query: 769 DR------INEIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSL 813
D ++ D R+LN ERA+ IL+ +R LD + + L+ ++++
Sbjct: 630 DHSIGTSTLDRADQAVQRLLNEAMERAERILREHREELDRLADLLIAEETV 680
>sp|P0C5C0|FTSH_MYCTU ATP-dependent zinc metalloprotease FtsH OS=Mycobacterium
tuberculosis GN=ftsH PE=1 SV=1
Length = 760
Score = 291 bits (745), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 191/473 (40%), Positives = 261/473 (55%), Gaps = 54/473 (11%)
Query: 391 MKSGARVRRAYGKGLPQYLER-----------GVDVKFSDMYRRR------------GVR 427
M+ GAR+ +GK + L + GVD ++Y + G +
Sbjct: 135 MQGGARMGFGFGKSRAKQLSKDMPKTTFADVAGVDEAVEELYEIKDFLQNPSRYQALGAK 194
Query: 428 IPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDN 487
IP G+LL GPPG GKTLLA+AVAGEAGV FF+IS S FVE++VGVGASRVR L+++AK N
Sbjct: 195 IPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQN 254
Query: 488 APSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDIL 547
+P ++F+DE+DAVGR+RG G G ER+ TLNQLLV +DGF R VI IA+TNRPDIL
Sbjct: 255 SPCIIFVDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDIL 314
Query: 548 DPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELAN 607
DPAL+RPGRFDR+I + P L GR +L+VH++ KPMA D D +A T GM GA+LAN
Sbjct: 315 DPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADLDGLAKRTVGMTGADLAN 374
Query: 608 IVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVA 665
++ AA+ R+ T IT L +A G RK R S + + A +E + A
Sbjct: 375 VINEAALLTARENGTVITGPALEEAVD-RVIGGPRRKGRIISEQEKKITAYHEGGHTLAA 433
Query: 666 VNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADEL 725
PD++ I VTI R GR G+ + K G+ +R ++ + + RAA+EL
Sbjct: 434 WAMPDIEPIYKVTILAR-GRTGGHAVAVPEEDK---GLRTRSEMIAQLVFAMGGRAAEEL 489
Query: 726 WCGE---GQLSTIWAETADNARSAARTFVLGGLSDK-----------------HFGLSNF 765
E G +S I T ARS F G+S K G
Sbjct: 490 VFREPTTGAVSDIEQAT-KIARSMVTEF---GMSSKLGAVKYGSEHGDPFLGRTMGTQPD 545
Query: 766 WVADRINEIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEF 818
+ + EID E +++ + A EIL R++LD + EL+EK++L + E
Sbjct: 546 YSHEVAREIDEEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPEL 598
>sp|A5U8T5|FTSH_MYCTA ATP-dependent zinc metalloprotease FtsH OS=Mycobacterium
tuberculosis (strain ATCC 25177 / H37Ra) GN=ftsH PE=3
SV=1
Length = 760
Score = 291 bits (745), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 191/473 (40%), Positives = 261/473 (55%), Gaps = 54/473 (11%)
Query: 391 MKSGARVRRAYGKGLPQYLER-----------GVDVKFSDMYRRR------------GVR 427
M+ GAR+ +GK + L + GVD ++Y + G +
Sbjct: 135 MQGGARMGFGFGKSRAKQLSKDMPKTTFADVAGVDEAVEELYEIKDFLQNPSRYQALGAK 194
Query: 428 IPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDN 487
IP G+LL GPPG GKTLLA+AVAGEAGV FF+IS S FVE++VGVGASRVR L+++AK N
Sbjct: 195 IPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQN 254
Query: 488 APSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDIL 547
+P ++F+DE+DAVGR+RG G G ER+ TLNQLLV +DGF R VI IA+TNRPDIL
Sbjct: 255 SPCIIFVDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDIL 314
Query: 548 DPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELAN 607
DPAL+RPGRFDR+I + P L GR +L+VH++ KPMA D D +A T GM GA+LAN
Sbjct: 315 DPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADLDGLAKRTVGMTGADLAN 374
Query: 608 IVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVA 665
++ AA+ R+ T IT L +A G RK R S + + A +E + A
Sbjct: 375 VINEAALLTARENGTVITGPALEEAVD-RVIGGPRRKGRIISEQEKKITAYHEGGHTLAA 433
Query: 666 VNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADEL 725
PD++ I VTI R GR G+ + K G+ +R ++ + + RAA+EL
Sbjct: 434 WAMPDIEPIYKVTILAR-GRTGGHAVAVPEEDK---GLRTRSEMIAQLVFAMGGRAAEEL 489
Query: 726 WCGE---GQLSTIWAETADNARSAARTFVLGGLSDK-----------------HFGLSNF 765
E G +S I T ARS F G+S K G
Sbjct: 490 VFREPTTGAVSDIEQAT-KIARSMVTEF---GMSSKLGAVKYGSEHGDPFLGRTMGTQPD 545
Query: 766 WVADRINEIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEF 818
+ + EID E +++ + A EIL R++LD + EL+EK++L + E
Sbjct: 546 YSHEVAREIDEEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPEL 598
>sp|P0A4V9|FTSH_MYCBO ATP-dependent zinc metalloprotease FtsH OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=ftsH PE=3 SV=1
Length = 760
Score = 291 bits (745), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 191/473 (40%), Positives = 261/473 (55%), Gaps = 54/473 (11%)
Query: 391 MKSGARVRRAYGKGLPQYLER-----------GVDVKFSDMYRRR------------GVR 427
M+ GAR+ +GK + L + GVD ++Y + G +
Sbjct: 135 MQGGARMGFGFGKSRAKQLSKDMPKTTFADVAGVDEAVEELYEIKDFLQNPSRYQALGAK 194
Query: 428 IPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDN 487
IP G+LL GPPG GKTLLA+AVAGEAGV FF+IS S FVE++VGVGASRVR L+++AK N
Sbjct: 195 IPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQN 254
Query: 488 APSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDIL 547
+P ++F+DE+DAVGR+RG G G ER+ TLNQLLV +DGF R VI IA+TNRPDIL
Sbjct: 255 SPCIIFVDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDIL 314
Query: 548 DPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELAN 607
DPAL+RPGRFDR+I + P L GR +L+VH++ KPMA D D +A T GM GA+LAN
Sbjct: 315 DPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADLDGLAKRTVGMTGADLAN 374
Query: 608 IVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVA 665
++ AA+ R+ T IT L +A G RK R S + + A +E + A
Sbjct: 375 VINEAALLTARENGTVITGPALEEAVD-RVIGGPRRKGRIISEQEKKITAYHEGGHTLAA 433
Query: 666 VNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADEL 725
PD++ I VTI R GR G+ + K G+ +R ++ + + RAA+EL
Sbjct: 434 WAMPDIEPIYKVTILAR-GRTGGHAVAVPEEDK---GLRTRSEMIAQLVFAMGGRAAEEL 489
Query: 726 WCGE---GQLSTIWAETADNARSAARTFVLGGLSDK-----------------HFGLSNF 765
E G +S I T ARS F G+S K G
Sbjct: 490 VFREPTTGAVSDIEQAT-KIARSMVTEF---GMSSKLGAVKYGSEHGDPFLGRTMGTQPD 545
Query: 766 WVADRINEIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEF 818
+ + EID E +++ + A EIL R++LD + EL+EK++L + E
Sbjct: 546 YSHEVAREIDEEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPEL 598
>sp|Q9CD58|FTSH_MYCLE ATP-dependent zinc metalloprotease FtsH OS=Mycobacterium leprae
(strain TN) GN=ftsH PE=3 SV=1
Length = 787
Score = 291 bits (744), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 192/474 (40%), Positives = 263/474 (55%), Gaps = 56/474 (11%)
Query: 391 MKSGARVRRAYGKGLPQYLER-----------GVDVKFSDMYRRR------------GVR 427
M+ GAR+ +GK + L + GVD ++Y + G +
Sbjct: 135 MQGGARMGFGFGKSRAKQLSKDMPKTTFADVAGVDEAVEELYEIKDFLQNPCRYQTLGAK 194
Query: 428 IPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDN 487
IP G+LL GPPG GKTLLA+AVAGEAGV FF+IS S FVE++VGVGASRVR L+ +AK N
Sbjct: 195 IPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFDQAKQN 254
Query: 488 APSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDIL 547
+P ++F+DE+DAVGR+RG G G ER+ TLNQLLV +DGF R VI IA+TNRPDIL
Sbjct: 255 SPCIIFVDEIDAVGRQRGTGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDIL 314
Query: 548 DPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELAN 607
DPAL+RPGRFDR+I + P L GR +L+VH++ KP+ADD D +A T GM GA+LAN
Sbjct: 315 DPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPIADDADLDGLAKRTVGMTGADLAN 374
Query: 608 IVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVA 665
+V AA+ R+ IT L +A G RK R S + + A +E + A
Sbjct: 375 VVNEAALLTARENGLVITGPALEEAVD-RVIGGPRRKGRIISEQEKKITAYHEGGHTLAA 433
Query: 666 VNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADEL 725
PD++ I VTI R GR G+ + K G+ +R ++ + + RAA+EL
Sbjct: 434 WAMPDIEPIYKVTILAR-GRTGGHAVAVPEEDK---GLRTRSEMIAQLVFAMGGRAAEEL 489
Query: 726 WCGE---GQLSTIWAETADNARSAARTFV--------LGGL------SDKHFGLSNFWVA 768
E G +S I + A AR+ V LG + D G + A
Sbjct: 490 VFREPTTGAVSDI-----EKATKIARSMVTEFGMSSKLGAVRYGSEHGDPFLGRTMGTQA 544
Query: 769 DRINE----IDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEF 818
D +E ID E +++ + A EIL R++LD + EL+EK++L + E
Sbjct: 545 DYSHEVARDIDDEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPEL 598
>sp|Q9FH02|FTSH5_ARATH ATP-dependent zinc metalloprotease FTSH 5, chloroplastic
OS=Arabidopsis thaliana GN=FTSH5 PE=1 SV=1
Length = 704
Score = 291 bits (744), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 176/442 (39%), Positives = 251/442 (56%), Gaps = 39/442 (8%)
Query: 409 LERGVD-VKFSDMYRRRGVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVE 467
L+ VD +K D Y G +IP G LL GPPG GKTLLA+AVAGEAGV FFS +AS+FVE
Sbjct: 262 LQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVE 321
Query: 468 IYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLD 527
++VGVGASRVR L+++AK AP +VFIDE+DAVGR+RG G G ER+ T+NQLL +D
Sbjct: 322 LFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMD 381
Query: 528 GFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADD 587
GF G VI +A+TNRPD+LD AL+RPGRFDR++ + +P + GR++ILKVH+R K + D
Sbjct: 382 GFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVQILKVHSRGKAIGKD 441
Query: 588 VDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER- 646
VDY VA T G GA+L N++ AAI R EI+ D++ A ER + +++
Sbjct: 442 VDYEKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDEISDAL---ERIIAGPEKKN 498
Query: 647 ---SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGM 703
S E R VA +EA A+V P+ + ++I PR G+ G + + G+
Sbjct: 499 AVVSEEKKRLVAYHEAGHALVGALMPEYDPVAKISIIPR-GQAGGLTFFAPSEERLESGL 557
Query: 704 LSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFVLGGLSDKHFGLS 763
SR L + + V L R A+E+ G+ ++T + AR V + FG S
Sbjct: 558 YSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQMV------ERFGFS 611
Query: 764 -------------NFWVADRINE-----------IDTEALRILNLCYERAKEILQRNRNL 799
N ++ ++ +D E ++ Y RAKEI+ ++
Sbjct: 612 KKIGQVAVGGAGGNPFLGQSMSSQKDYSMATADVVDAEVRELVEKAYVRAKEIITTQIDI 671
Query: 800 LDAVVNELVEKKSLTKQEFFHL 821
L + L+EK+++ +EF L
Sbjct: 672 LHKLAQLLIEKETVDGEEFMSL 693
>sp|C5CES8|FTSH_KOSOT ATP-dependent zinc metalloprotease FtsH OS=Kosmotoga olearia
(strain TBF 19.5.1) GN=ftsH PE=3 SV=1
Length = 645
Score = 291 bits (744), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 177/430 (41%), Positives = 256/430 (59%), Gaps = 26/430 (6%)
Query: 415 VKFSDMYRRRGVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGA 474
+K + + + G R+P GILL GPPG GKTLLA+AVAGEA V FF IS S FVE++VGVGA
Sbjct: 183 LKNPNAFSQTGARMPKGILLVGPPGTGKTLLARAVAGEANVPFFYISGSDFVELFVGVGA 242
Query: 475 SRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGN 534
+RVR L+ +AK +APS++FIDE+DAVGR RG G G ER+ TLNQ+LV +DGF+ +
Sbjct: 243 ARVRDLFSQAKASAPSIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQILVEMDGFDAKTG 302
Query: 535 VITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVA 594
VI +A+TNRPDILD AL+RPGRFD+KI + P + GR EILK+H R KP+ DVD +A
Sbjct: 303 VIVMAATNRPDILDHALLRPGRFDKKITVDPPDVKGRAEILKIHMRGKPVDPDVDVWLLA 362
Query: 595 SMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SSETWR 652
T G VGA+L N+V AAI R + I +L +A G RK R + + +
Sbjct: 363 RRTPGFVGADLENLVNEAAILAARRKKKIIGMKELEEAIDRVIAGPA-RKSRIMNPKEKK 421
Query: 653 QVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDH 712
VA +E A+V + P+ + VT+ PR LG+ ++ ++SR +LD+
Sbjct: 422 IVAYHELGHAIVGLALPNAYPVHKVTVIPRGSASLGFTESLPSEDRY---LVSRSEMLDN 478
Query: 713 ITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFVLG-GLSDKHFGLS-------- 763
+ L RAA+E+ GE ++T A + A ART V G+SD+ ++
Sbjct: 479 LAQILGGRAAEEIVFGE--ITTGAANDLERATQMARTMVCQLGMSDRLGPIAWGKEEGEV 536
Query: 764 ---------NFWVADRINEIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLT 814
+ + +EID E +I+ +ERA++++++ R+ LD L+EK+++T
Sbjct: 537 FLGRELTRMRNYSEEIASEIDNEVKKIVIEAHERARKLVEKFRDKLDKAAEYLIEKETIT 596
Query: 815 KQEFFHLVEL 824
+E +V L
Sbjct: 597 GKELAEIVGL 606
>sp|Q1D491|FTSH_MYXXD ATP-dependent zinc metalloprotease FtsH OS=Myxococcus xanthus
(strain DK 1622) GN=ftsH PE=3 SV=1
Length = 638
Score = 290 bits (742), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 180/440 (40%), Positives = 246/440 (55%), Gaps = 33/440 (7%)
Query: 421 YRRRGVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSL 480
+ + G RIP G+L+ G PG GKTLLA+AVAGEAGV FFSIS S FVE++VGVGASRVR L
Sbjct: 180 FTKLGGRIPKGVLMMGSPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDL 239
Query: 481 YQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIAS 540
+++ K NAP ++FIDE+DAVGR RG G G ER+ TLNQLLV +DGFE VI IA+
Sbjct: 240 FEQGKKNAPCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFESNDGVILIAA 299
Query: 541 TNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGM 600
TNRPD+LDPAL RPGRFDR+I +P+P + GR+ +LKVH R+ P+A +VD +A T GM
Sbjct: 300 TNRPDVLDPALQRPGRFDRRIVVPRPDVKGRLGVLKVHTRRVPLAPEVDLEVIARGTPGM 359
Query: 601 VGAELANIVEVAAINMMRDGRTEITTDDLLQAAQ-----IEERGMLDRKERSSETWRQVA 655
GA+L N+V +A+ R + + D A E R M+ ++ T A
Sbjct: 360 TGADLENLVNESALMAARQNKERVDLSDFEAAKDKVFMGPERRSMIMTEKEKKNT----A 415
Query: 656 INEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITV 715
++EA A++A P + VTI PR G+ LG K ++ +LD I++
Sbjct: 416 VHEAGHALLAKLLPGCDPLHKVTIIPR-GQALGVTWSLPTEDKVNG---YKKQMLDQISM 471
Query: 716 QLAPRAADELWCGEGQLSTIWAETADNARSAARTFVL-GGLSDK---------------- 758
+ R A+EL E +S+ A + A AR V G+S+K
Sbjct: 472 AMGGRIAEELMFNE--MSSGAANDIERATETARAMVCRWGMSEKMGPLAFGKSDGEVFLG 529
Query: 759 -HFGLSNFWVADRINEIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQE 817
F S + D +ID E I+ CYER K +L N L V + LVE ++L ++
Sbjct: 530 RDFNSSKDYSEDTARQIDAEVRNIVVGCYERGKNLLTENIEALRRVSDALVEYETLDAED 589
Query: 818 FFHLVELHGSLEPMPPSIVD 837
L++ PP V+
Sbjct: 590 VNILLQGGQLTRERPPPRVN 609
>sp|D1CDT8|FTSH_THET1 ATP-dependent zinc metalloprotease FtsH OS=Thermobaculum terrenum
(strain ATCC BAA-798 / YNP1) GN=ftsH PE=3 SV=1
Length = 646
Score = 290 bits (741), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 179/433 (41%), Positives = 249/433 (57%), Gaps = 30/433 (6%)
Query: 421 YRRRGVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSL 480
Y+R G IP G+LL GPPG GKTLLA+AVAGEAGV FFS+S S+FVE+ VGVGA+RVR L
Sbjct: 222 YQRLGGTIPKGVLLIGPPGTGKTLLARAVAGEAGVPFFSMSGSEFVEMIVGVGAARVREL 281
Query: 481 YQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIA 539
+Q+AK AP ++F+DELDA+GR RG GG ER+ TLNQLLV +DGF+ R VI +A
Sbjct: 282 FQQAKKEAPCIIFVDELDAIGRRRGSSINVGGHDEREQTLNQLLVEMDGFDSRQGVIVLA 341
Query: 540 STNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDG 599
+TNRPD+LDPAL+RPGRFDR++ + +P +GR++IL+VH R P+ ++D +A+ T G
Sbjct: 342 ATNRPDVLDPALLRPGRFDRRVVVQRPDKVGRLKILQVHTRNVPLDPNLDLSEIAAATPG 401
Query: 600 MVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQVAINEA 659
+VGA+L N+V AA+ R G+ + +D A + G + S E R+VA +E+
Sbjct: 402 LVGADLRNLVNEAALLAARRGKNYVDREDFFDALEKITLGAERKLLISEEDRRRVAYHES 461
Query: 660 AMAVVAVNFPDLKNIEFVTIAPRAGRELG--YVRMKMDHMKFKEGMLSRQSLLDHITVQL 717
A++ + P+ + VTI PR G+ LG Y + D + E + L IT L
Sbjct: 462 GHALLGLLLPEADPVHKVTIIPR-GQALGVTYQTPEDDRYNYTE-----RYLRSRITAAL 515
Query: 718 APRAADELWCGEGQLSTIWAETADNARSAARTFVLGGLSDKHFGL--------SNFWVAD 769
RAA+EL G ++T AR V K GL +F +
Sbjct: 516 GGRAAEELVF--GTVTTGAENDLKQVTEIARQMVTRWGMSKEVGLVYLSPDGQEDFLGPN 573
Query: 770 RINE----------IDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFF 819
I ID E RI++ CY A +L R R LD + L+ ++SL +Q+
Sbjct: 574 PITSREYSESLATVIDRETRRIIDECYAEALSLLNRERQRLDNLAEALLREESLDEQQIR 633
Query: 820 HLVELHGSLEPMP 832
+V L G +P P
Sbjct: 634 EIVGL-GEKQPEP 645
>sp|O67077|FTSH_AQUAE ATP-dependent zinc metalloprotease FtsH OS=Aquifex aeolicus (strain
VF5) GN=ftsH PE=1 SV=1
Length = 634
Score = 289 bits (740), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 199/484 (41%), Positives = 279/484 (57%), Gaps = 57/484 (11%)
Query: 391 MKSGARVRRAYGKGLPQ---YLERGVDVKFSDM----------------------YRRRG 425
M G V RA+ G + Y+E V F D+ +++ G
Sbjct: 125 MSGGGNVNRAFNFGKSRAKVYIEEKPKVTFKDVAGIEEVKEEVKEIIEYLKDPVKFQKLG 184
Query: 426 VRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAK 485
R P G+LL G PGVGKTLLAKA+AGEA V F S+S S FVE++VGVGA+RVR L++ AK
Sbjct: 185 GRPPKGVLLYGEPGVGKTLLAKAIAGEAHVPFISVSGSDFVEMFVGVGAARVRDLFETAK 244
Query: 486 DNAPSVVFIDELDAVGRERGLIK-GSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRP 544
+AP ++FIDE+DAVGR RG I G G ER+ TLNQLLV +DGF+ +I IA+TNRP
Sbjct: 245 KHAPCIIFIDEIDAVGRARGAIPVGGGHDEREQTLNQLLVEMDGFDTSDGIIVIAATNRP 304
Query: 545 DILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAE 604
DILDPAL+RPGRFDR+IFIPKP + GR EILKVHAR K +A DVD VA T G GA+
Sbjct: 305 DILDPALLRPGRFDRQIFIPKPDVRGRYEILKVHARNKKLAKDVDLEFVARATPGFTGAD 364
Query: 605 LANIVEVAAINMMRDGRTEITTDDLLQAAQ-----IEERGM-LDRKERSSETWRQVAINE 658
L N++ AA+ R G+ EIT +++ +A +E +GM + KE+ ++AI+E
Sbjct: 365 LENLLNEAALLAARKGKEEITMEEIEEALDRITMGLERKGMTISPKEKE-----KIAIHE 419
Query: 659 AAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLA 718
A A++ + D + ++I PR G LG + K + ++ L + I V L
Sbjct: 420 AGHALMGLVSDDDDKVHKISIIPR-GMALGVTQQLPIEDKH---IYDKKDLYNKILVLLG 475
Query: 719 PRAADELWCGEGQLSTIWAETADNARSAA-RTFVLGGLSDKHFGLSNFWVA--------- 768
RAA+E++ G+ ++T A A R + G+SDK ++ VA
Sbjct: 476 GRAAEEVFFGKDGITTGAENDLQRATDLAYRMVSMWGMSDKVGPIAIRRVANPFLGGMTT 535
Query: 769 ------DRINEIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLV 822
D + EID E RI+ YE+AK I++ + L AVV +L+EK+++T +EF +
Sbjct: 536 AVDTSPDLLREIDEEVKRIITEQYEKAKAIVEEYKEPLKAVVKKLLEKETITCEEFVEVF 595
Query: 823 ELHG 826
+L+G
Sbjct: 596 KLYG 599
>sp|Q9TJ83|FTSH_CYAME ATP-dependent zinc metalloprotease FtsH OS=Cyanidioschyzon merolae
GN=ftsH PE=3 SV=1
Length = 603
Score = 289 bits (739), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 177/421 (42%), Positives = 242/421 (57%), Gaps = 33/421 (7%)
Query: 425 GVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEA 484
G IP G+LL GPPG GKTLLAKA+AGEA V FFSIS S+FVE++VGVGASRVR L+++A
Sbjct: 183 GASIPKGVLLVGPPGTGKTLLAKAIAGEASVPFFSISGSEFVEMFVGVGASRVRDLFKKA 242
Query: 485 KDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRP 544
K NAP +VFIDE+DAVGR+RG G G ER+ TLNQLL +DGFEG VI IA+TNR
Sbjct: 243 KQNAPCLVFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVIAATNRV 302
Query: 545 DILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAE 604
D+LD AL+RPGRFDR+I + P + R+ ILKVHA +K + V AVA T G GA+
Sbjct: 303 DVLDAALLRPGRFDRQIMVSMPDVKSRIAILKVHANQKKLHPQVSLEAVARRTAGFAGAD 362
Query: 605 LANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQVAINEAAMAVV 664
LAN++ AAI +R G +IT ++ A GM + R +A +E A+
Sbjct: 363 LANLLNEAAILAVRRGLKQITWKEIDDAIDRVIAGMEGTPIMDGKIKRLIAYHETGHALT 422
Query: 665 AVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADE 724
A P+ ++ VT+ PR + G D+ + +LS+ L+ I V L RAA+E
Sbjct: 423 ATLLPNHPPVQKVTLIPRR-QAKGLTWFMQDN---ERDLLSKSQLMSMIMVALGGRAAEE 478
Query: 725 LWCGEGQLSTIWAETADNARSAARTFVLGGLSDKHFGLSN-------------FWVADR- 770
G +++T + + AR V FG+S+ F D
Sbjct: 479 AVFGNAEVTTGASNDLQQVTNLARQMV------TRFGMSSLGPLCLETGNEEIFLGRDMR 532
Query: 771 ---------INEIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHL 821
I +ID + ++ CYE+ E++Q NR ++D +V EL+EK++L +EF L
Sbjct: 533 LMPEVSEEVIAQIDAQVRGMIEACYEKVLELMQANRVVMDRIVEELMEKETLDGKEFRQL 592
Query: 822 V 822
V
Sbjct: 593 V 593
>sp|O78516|FTSH_GUITH ATP-dependent zinc metalloprotease FtsH OS=Guillardia theta GN=ftsH
PE=3 SV=1
Length = 631
Score = 288 bits (738), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 182/479 (37%), Positives = 264/479 (55%), Gaps = 38/479 (7%)
Query: 387 AMQFMKSGARVRRAYGKGLPQYLERGVD------------VKFSDMYRRRGVRIPGGILL 434
AM F KS AR + G+ GVD +K + + G +IP G+LL
Sbjct: 152 AMNFGKSKARFQMEAKTGVTFNDVAGVDEAKEEFEEVVSFLKKPERFTAVGAKIPKGVLL 211
Query: 435 CGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFI 494
GPPG GKTLLAKA+AGEAGV FFSIS S+FVE++VGVGASRVR L+++AK+N+P +VFI
Sbjct: 212 VGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENSPCIVFI 271
Query: 495 DELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRP 554
DE+DAVGR+RG G G ER+ TLNQLL +DGFEG +I IA+TNR D+LD AL+RP
Sbjct: 272 DEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRVDVLDAALLRP 331
Query: 555 GRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAI 614
GRFDR++ + P + GR+EIL VHAR K + + +A T G GA+LAN++ AAI
Sbjct: 332 GRFDRQVTVDVPDVKGRLEILNVHARNKKLDLSISLELIAKRTPGFSGADLANLLNEAAI 391
Query: 615 NMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNI 674
R + +IT ++ + GM + S+T R +A +E A++ +
Sbjct: 392 LTARRRKKQITISEIDASIDRVIAGMEGKALVDSKTKRLIAYHEVGHAIIGTLLKHHDPV 451
Query: 675 EFVTIAPRA-GRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLS 733
+ VT+ PR + L + D + ++SR +L I L RAA+E+ G +++
Sbjct: 452 QKVTLVPRGQAKGLTWFTPSED-----QSLISRSQILARIMGALGGRAAEEVVFGLPEVT 506
Query: 734 TIWAETADNARSAARTFV-------LGGLS----------DKHFGLSNFWVADRINEIDT 776
T S AR V +G LS + G S+ + D + ID
Sbjct: 507 TGAGNDLQQVTSMARQMVTRFGMSNIGPLSLESQNSDPFLGRTMGSSSQYSEDIASRIDM 566
Query: 777 EALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLVELHGSLEPMPPSI 835
+ I+ C+ +I++ NR ++D +V+ L+EK+++ EF +V G +P I
Sbjct: 567 QVRAIIQHCHTETVQIIKDNRVVIDKLVDLLIEKETIDGDEFRQIV---GDFTSLPEKI 622
>sp|Q655S1|FTSH2_ORYSJ ATP-dependent zinc metalloprotease FTSH 2, chloroplastic OS=Oryza
sativa subsp. japonica GN=FTSH2 PE=3 SV=1
Length = 676
Score = 288 bits (736), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 181/424 (42%), Positives = 245/424 (57%), Gaps = 46/424 (10%)
Query: 425 GVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEA 484
G RIP G+LL GPPG GKTLLAKA+AGEAGV FFSIS S+FVE++VGVGASRVR L+++A
Sbjct: 243 GARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKA 302
Query: 485 KDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRP 544
K+NAP +VF+DE+DAVGR+RG G G ER+ TLNQLL +DGFEG +I IA+TNR
Sbjct: 303 KENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRA 362
Query: 545 DILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAE 604
DILD AL+RPGRFDR++ + P + GR EILKVH K DV +A T G GA+
Sbjct: 363 DILDSALLRPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDTDVSLEVIAMRTPGFSGAD 422
Query: 605 LANIVEVAAINMMRDGRTEITT---DDLLQ--AAQIEERGMLDRKERSSETWRQVAINEA 659
LAN++ AAI R GRT I++ DD + A +E M D K +S VA +E
Sbjct: 423 LANLLNEAAILAGRRGRTAISSKEIDDSIDRIVAGMEGTVMTDGKSKS-----LVAYHEV 477
Query: 660 AMAVVAVNFPDLKNIEFVTIAPRA-GRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLA 718
A+ P ++ VT+ PR R L + + MD ++SRQ L I L
Sbjct: 478 GHAICGTLTPGHDPVQKVTLIPRGQARGLTWF-IPMDDPT----LISRQQLFARIVGGLG 532
Query: 719 PRAADELWCGEGQLSTIWAETADNARSAARTFVLGGLSDKHFGLSNF--W---------- 766
RAA+E+ GE +++T A A+ V+ FG+S+ W
Sbjct: 533 GRAAEEIIFGEPEVTTGAAGDLQQITGLAKQMVV------TFGMSDIGPWSLMDSGAQSG 586
Query: 767 -----------VADRINE-IDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLT 814
+++++ E IDT R+ + YE A ++ NR +D +V L+EK++L+
Sbjct: 587 DVIMRMMARNSMSEKLAEDIDTAVKRLSDEAYEIALSQIRSNREAMDKIVEVLLEKETLS 646
Query: 815 KQEF 818
EF
Sbjct: 647 GDEF 650
>sp|Q39102|FTSH1_ARATH ATP-dependent zinc metalloprotease FTSH 1, chloroplastic
OS=Arabidopsis thaliana GN=FTSH1 PE=1 SV=2
Length = 716
Score = 287 bits (734), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 172/442 (38%), Positives = 253/442 (57%), Gaps = 39/442 (8%)
Query: 409 LERGVD-VKFSDMYRRRGVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVE 467
L+ VD +K D Y G +IP G LL GPPG GKTLLA+AVAGEAGV FFS +AS+FVE
Sbjct: 274 LQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVE 333
Query: 468 IYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLD 527
++VGVGASRVR L+++AK AP +VFIDE+DAVGR+RG G G ER+ T+NQLL +D
Sbjct: 334 LFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMD 393
Query: 528 GFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADD 587
GF G VI +A+TNRPD+LD AL+RPGRFDR++ + +P + GR++IL+VH+R K + D
Sbjct: 394 GFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALGKD 453
Query: 588 VDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER- 646
VD+ VA T G GA+L N++ AAI R EI+ D++ A ER + +++
Sbjct: 454 VDFDKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDEISDAL---ERIIAGPEKKN 510
Query: 647 ---SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGM 703
S E R VA +EA A+V P+ + ++I PR G+ G + + G+
Sbjct: 511 AVVSEEKKRLVAYHEAGHALVGALMPEYDPVAKISIIPR-GQAGGLTFFAPSEERLESGL 569
Query: 704 LSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFVLGGLSDKHFGLS 763
SR L + + V L R A+E+ G+ ++T + AR + + FG S
Sbjct: 570 YSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQMI------ERFGFS 623
Query: 764 -------------NFWVADRINE-----------IDTEALRILNLCYERAKEILQRNRNL 799
N ++ +++ +D E ++ Y+RA EI+ + ++
Sbjct: 624 KKIGQVAVGGPGGNPFMGQQMSSQKDYSMATADIVDAEVRELVEKAYKRATEIITTHIDI 683
Query: 800 LDAVVNELVEKKSLTKQEFFHL 821
L + L+EK+++ +EF L
Sbjct: 684 LHKLAQLLIEKETVDGEEFMSL 705
>sp|O82150|FTSH_TOBAC ATP-dependent zinc metalloprotease FTSH, chloroplastic OS=Nicotiana
tabacum GN=FTSH PE=2 SV=2
Length = 714
Score = 287 bits (734), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 171/436 (39%), Positives = 252/436 (57%), Gaps = 27/436 (6%)
Query: 409 LERGVD-VKFSDMYRRRGVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVE 467
L+ VD +K D Y G +IP G LL GPPG GKTLLA+AVAGEAGV FFS +AS+FVE
Sbjct: 265 LQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVE 324
Query: 468 IYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLD 527
++VGVGASRVR L+++AK AP +VFIDE+DAVGR+RG G G ER+ T+NQLL +D
Sbjct: 325 LFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMD 384
Query: 528 GFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADD 587
GF G VI +A+TNRPD+LD AL+RPGRFDR++ + +P + GR++IL+VH+R K + D
Sbjct: 385 GFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRIKILQVHSRGKALTKD 444
Query: 588 VDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER- 646
VD+ +A T G GA+L N++ AAI R EI+ D++ A ER + +++
Sbjct: 445 VDFEKIARRTPGYTGADLQNLMNEAAILAARRELKEISKDEISDAL---ERIIAGPEKKN 501
Query: 647 ---SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGM 703
S E + VA +EA A+V P+ + ++I PR G+ G + + G+
Sbjct: 502 AVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPR-GQAGGLTFFAPSEERLESGL 560
Query: 704 LSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFV--------LGGL 755
SR L + + V L R A+E+ G+ ++T + AR V +G +
Sbjct: 561 YSRSYLENQMAVALGERVAEEVIFGQDNVTTGASNDFMQVSRVARQMVERLGFSKKIGQV 620
Query: 756 SDKHFGLSNF----------WVADRINEIDTEALRILNLCYERAKEILQRNRNLLDAVVN 805
+ G + F + + +D E ++ YERA EI+ + ++L +
Sbjct: 621 AIGGGGGNPFLGQQMSTQKDYSMATADVVDAEVRELVERAYERATEIITTHIDILHKLAQ 680
Query: 806 ELVEKKSLTKQEFFHL 821
L+EK+++ +EF L
Sbjct: 681 LLIEKETVDGEEFMSL 696
>sp|C7MC16|FTSH_BRAFD ATP-dependent zinc metalloprotease FtsH OS=Brachybacterium faecium
(strain ATCC 43885 / DSM 4810 / NCIB 9860) GN=ftsH PE=3
SV=1
Length = 704
Score = 286 bits (733), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 184/432 (42%), Positives = 251/432 (58%), Gaps = 28/432 (6%)
Query: 421 YRRRGVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSL 480
Y+ G +IP G+LL GPPG GKTLLAKAVAGEA V F+SIS S FVE++VGVGASRVR L
Sbjct: 202 YQAVGAKIPKGVLLYGPPGTGKTLLAKAVAGEANVPFYSISGSDFVEMFVGVGASRVRDL 261
Query: 481 YQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIAS 540
+ AK+NAP+++FIDE+DAVGR RG G G ER+ TLNQ+LV +DGFE NVI IA+
Sbjct: 262 FNTAKENAPAIIFIDEIDAVGRHRGAGMGGGHDEREQTLNQMLVEMDGFEENQNVILIAA 321
Query: 541 TNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGM 600
TNR DILDPAL+RPGRFDR+I + P L GR+ IL VHA+ KP+A DVD AVA GM
Sbjct: 322 TNRVDILDPALLRPGRFDRQIGVEAPDLKGRLHILGVHAKGKPLAHDVDLEAVAKRAIGM 381
Query: 601 VGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQV-AINEA 659
GA+LAN++ AA+ R G I L +A G + +E RQ+ A +E
Sbjct: 382 SGADLANVLNEAALLTARSGNQIIDNRALDEAIDRVSMGPQRYSKVMTERERQMTAYHEG 441
Query: 660 AMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAP 719
A+VA + + VTI PR GR GY + + + SR LLD + +
Sbjct: 442 GHALVAAAMNNSAPVTKVTILPR-GRAGGYTMVVPTQDRNYQ---SRNELLDRLAYAMGG 497
Query: 720 RAADELWCGEGQLSTIWAETADNARSAARTFV-------------LGGLSDKHF-----G 761
A +E + ++T + NA ART V L G D+ F G
Sbjct: 498 YAVEESIFHD--VTTGPSSDLQNATKIARTMVMQLGMSGTVGQVALSGEQDEVFVGMQQG 555
Query: 762 LSNFWVADRINEIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHL 821
+ + A+ + +D E +L+ + A ++ NR++LD +V EL+EK++L ++E L
Sbjct: 556 QAPRFSAETASLVDQEVRTLLDNALDEAWSVIVENRHVLDRLVEELLEKETLNERE---L 612
Query: 822 VELHGSLEPMPP 833
++ ++ PP
Sbjct: 613 AQIFRDVKKQPP 624
>sp|B3R057|FTSH1_PHYMT ATP-dependent zinc metalloprotease FtsH 1 OS=Phytoplasma mali
(strain AT) GN=ftsH1 PE=3 SV=1
Length = 600
Score = 285 bits (730), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 171/413 (41%), Positives = 248/413 (60%), Gaps = 28/413 (6%)
Query: 421 YRRRGVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSL 480
Y G IP G+LL GPPG GKTLLAKA+AGEA V F+++S S+FVE+YVGVGASRVR+L
Sbjct: 200 YETIGAAIPKGVLLEGPPGTGKTLLAKALAGEASVPFYAVSGSEFVEMYVGVGASRVRTL 259
Query: 481 YQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIAS 540
++EAK NAP V+FIDE+D +G +RG G QE+D TLNQLL +DGF +I I +
Sbjct: 260 FKEAKLNAPCVLFIDEIDVLGGKRGGNSSGGNQEKDQTLNQLLTEMDGFTQAKGIIVIGA 319
Query: 541 TNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGM 600
TNR D+LD AL+RPGRFDRKI + P + R EILK+HA+ K ++ D+D+ +A T GM
Sbjct: 320 TNRADMLDAALLRPGRFDRKILVNLPDIKSRAEILKLHAQNKKLSSDIDFHQLAQQTPGM 379
Query: 601 VGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERS----SETWRQVAI 656
GA+LA ++ A+I +R+ + IT +L +A +R ++ ++S E R VA
Sbjct: 380 SGAQLAAVLNEASILTVRNHKDFITMTELSEAL---DRVLMGPAKKSIKYDPEERRMVAY 436
Query: 657 NEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGML-SRQSLLDHITV 715
+EA AV+ + + ++ +TI PR G GY M M KE SR+ +L I
Sbjct: 437 HEAGHAVIGIKLKHAQKVQKITIIPR-GNAGGYNLM----MPEKETFFSSRKRMLAQIQS 491
Query: 716 QLAPRAADELWCGEGQLSTIWAETADNARSAARTFVLGGLSDKHFGLSNFWV------AD 769
L R A+EL + I + D+ R A + + L +G+S+ V +D
Sbjct: 492 FLGGRVAEELVFDD-----ISSGAFDDFRQATK---IARLMVTKYGMSDLGVSQDSEFSD 543
Query: 770 RINEIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLV 822
+ IDT +I++ CY R K ++ N+ LLD + + L+E++++T+ E LV
Sbjct: 544 K-KLIDTAIKKIIDNCYARTKHLMLENKTLLDQIAHLLLEQETITQAEIEQLV 595
>sp|P46469|FTSH_LACLA ATP-dependent zinc metalloprotease FtsH OS=Lactococcus lactis
subsp. lactis (strain IL1403) GN=ftsH PE=3 SV=1
Length = 695
Score = 285 bits (730), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 176/421 (41%), Positives = 241/421 (57%), Gaps = 27/421 (6%)
Query: 421 YRRRGVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSL 480
Y G RIP G+LL GPPG GKTLLAKAVAGEAGV F+SIS S FVE++VGVGASRVR L
Sbjct: 218 YHDLGARIPAGVLLEGPPGTGKTLLAKAVAGEAGVPFYSISGSDFVEMFVGVGASRVRDL 277
Query: 481 YQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGN-VITIA 539
++ AK APS++FIDE+DAVGR+RG G G ER+ TLNQLLV +DGF+ GN VI IA
Sbjct: 278 FENAKKTAPSIIFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLVEMDGFQDDGNSVIVIA 337
Query: 540 STNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDG 599
+TNR D+LDPAL+RPGRFDRK+ + P + GR +LKVHA+ KP+A DVD VA+ T G
Sbjct: 338 ATNRSDVLDPALLRPGRFDRKVLVGAPDVKGREAVLKVHAKNKPLASDVDLHNVATQTPG 397
Query: 600 MVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQ-VAINE 658
VGA+L N++ AA+ R + EI D+ + G + S R+ VA +E
Sbjct: 398 YVGADLENVLNEAALVAARQNKKEINAADIDEGMDRAMAGPAKKDRIQSMREREIVAYHE 457
Query: 659 AAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLA 718
A A+V + + + VT+ PR GR GY+ D + + L D + +
Sbjct: 458 AGHAIVGLVLENGSTVRKVTVVPR-GRIGGYMLALPDEEIMQP---TNFHLQDQLASLMG 513
Query: 719 PRAADELWCGEGQLSTIWAET-ADNARSAARTFV--------LGGLS---------DKHF 760
R +E+ G ++T A + A AR+ V LG +S + +
Sbjct: 514 GRLGEEIVFG---VATPGASNDIEKATHIARSMVTEYGMSKKLGMVSYEGDHQVFIGRDY 570
Query: 761 GLSNFWVADRINEIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFH 820
G + + ID E RIL Y+RAKE ++ +R A+ L++ ++L ++
Sbjct: 571 GQTKTYSEATAVMIDDEVRRILGEAYDRAKEAIETHREQHKAIAEALLKYETLDAKQIMS 630
Query: 821 L 821
L
Sbjct: 631 L 631
>sp|A9BJK3|FTSH3_PETMO ATP-dependent zinc metalloprotease FtsH 3 OS=Petrotoga mobilis
(strain DSM 10674 / SJ95) GN=ftsH3 PE=3 SV=1
Length = 645
Score = 285 bits (728), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 173/432 (40%), Positives = 250/432 (57%), Gaps = 42/432 (9%)
Query: 420 MYRRRGVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRS 479
++ R G R+P G+LL G PG GKTLLA+AVAGEAGV FF IS S FVE++VGVGA+RVR
Sbjct: 186 VFNRLGARMPKGVLLVGEPGTGKTLLARAVAGEAGVPFFYISGSDFVELFVGVGAARVRD 245
Query: 480 LYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIA 539
L+ +AK NAP+++FIDE+DAVGR+RG G G ER+ TLN +LV +DGF+ +I +A
Sbjct: 246 LFNQAKANAPAIIFIDEIDAVGRQRGSGLGGGHDEREQTLNSILVEMDGFDPSIGIIVMA 305
Query: 540 STNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDG 599
+TNRPD+LD AL+RPGRFD+K+ I +P GR +ILK+H R K +A DVD +A T G
Sbjct: 306 ATNRPDVLDKALLRPGRFDKKVVIDRPDAEGRKDILKIHFRGKKIAPDVDLEVLARATPG 365
Query: 600 MVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGML--DRKER--SSETWRQVA 655
VGA+L N+V AA+ R+G IT D +A ER ++ +RK R S + VA
Sbjct: 366 FVGADLENLVNEAALLAARNGEKFITMKDCEEAI---ERVIVGPERKTRVLSEQEKEVVA 422
Query: 656 INEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITV 715
+E A++ P+ + VTI PR LGY ++ ++++ +LD I V
Sbjct: 423 YHELGHAILGTILPNADPVHKVTIIPRGYAALGYTLQLPSEDRY---LMNKSEILDDIAV 479
Query: 716 QLAPRAADELWCGEGQLSTIWAETADNARSAARTFVLGGLSDKHFGLSN-----FWVADR 770
LA RAA+E+ E +++ A AR V + FG+S W ++
Sbjct: 480 MLAGRAAEEIIFDE--ITSGAENDLKRATEMARRMV------ESFGMSEKIGPVAWASES 531
Query: 771 -------------------INEIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKK 811
E+D+E +I+N YE+AK +L N+ L + L++K+
Sbjct: 532 EETFLARELFREKNYSDETAKELDSEVKQIINKSYEKAKSVLLENKEKLQFIAQYLLKKE 591
Query: 812 SLTKQEFFHLVE 823
+++ QE L++
Sbjct: 592 TISGQELRDLLQ 603
>sp|B8H444|FTSH_CAUCN ATP-dependent zinc metalloprotease FtsH OS=Caulobacter crescentus
(strain NA1000 / CB15N) GN=ftsH PE=2 SV=1
Length = 626
Score = 285 bits (728), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 173/438 (39%), Positives = 252/438 (57%), Gaps = 41/438 (9%)
Query: 421 YRRRGVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSL 480
++R G +IP G LL GPPG GKTL+A+AVAGEAGV FF+IS S FVE++VGVGASRVR +
Sbjct: 176 FQRLGGKIPKGALLVGPPGTGKTLIARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDM 235
Query: 481 YQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIAS 540
+++AK NAP ++FIDE+DAVGR RG G G ER+ TLNQLLV +DGFE +I IA+
Sbjct: 236 FEQAKKNAPCIIFIDEIDAVGRHRGAGLGGGNDEREQTLNQLLVEMDGFEANEGIILIAA 295
Query: 541 TNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGM 600
TNRPD+LDPAL+RPGRFDR++ +P P + GR +I++VH + P+A DVD +A T G
Sbjct: 296 TNRPDVLDPALLRPGRFDRQVVVPNPDVAGREKIIRVHMKNVPLAADVDVKTLARGTPGF 355
Query: 601 VGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERS----SETWRQVAI 656
GA+LAN+V AA+ R R +T D QA +++ M+ + RS E + A
Sbjct: 356 SGADLANLVNEAALMAARKNRRMVTMQDFEQA---KDKVMMGAERRSMAMNEEEKKLTAY 412
Query: 657 NEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEG---MLSRQSLLDHI 713
+E A+VA+N P + TI PR GR LG V M+ EG + Q + +
Sbjct: 413 HEGGHAIVALNVPLADPVHKATIVPR-GRALGMV------MQLPEGDRYSMKYQQMTSRL 465
Query: 714 TVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFV--------LGGLS-----DKHF 760
+ + R A+E+ G+ +++ + A AR V LG ++ D+ F
Sbjct: 466 AIMMGGRVAEEIIFGKENITSGASSDIKAATDLARNMVTRWGYSDILGTVAYGDNQDEVF 525
Query: 761 GLSNFWVADRINE-----IDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTK 815
+ ++E ID+E R++ + A+ IL + L + L+E ++L+
Sbjct: 526 LGHSVARTQNVSEETARLIDSEVKRLVQYGLDEARRILTDKIDDLHTLGKALLEYETLSG 585
Query: 816 QEFFHLVELHGSLEPMPP 833
+E + L+ +PP
Sbjct: 586 EEIADI------LKGIPP 597
>sp|B9KXV3|FTSH1_THERP ATP-dependent zinc metalloprotease FtsH 1 OS=Thermomicrobium roseum
(strain ATCC 27502 / DSM 5159 / P-2) GN=ftsH1 PE=3 SV=1
Length = 652
Score = 285 bits (728), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 186/442 (42%), Positives = 257/442 (58%), Gaps = 31/442 (7%)
Query: 415 VKFSDMYRRRGVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGA 474
+K+ + + G RIP G+LL GPPG GKTLL++AVAGEAGV FFSIS S+FVE++VGVGA
Sbjct: 182 LKYPEKFAALGARIPRGVLLVGPPGTGKTLLSRAVAGEAGVPFFSISGSEFVEMFVGVGA 241
Query: 475 SRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGN 534
SRVR L+ +AK NAP +VFIDE+DAVGR+RG G ER+ TLNQ+LV +DGF+ N
Sbjct: 242 SRVRDLFDQAKRNAPCIVFIDEIDAVGRQRGAGLGGSHDEREQTLNQILVEMDGFDSSTN 301
Query: 535 VITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVA 594
VI IA+TNRPD+LDPAL+RPGRFDR++ + +P L GR+ ILKVH R KP+ DVD +A
Sbjct: 302 VIVIAATNRPDVLDPALLRPGRFDRQVVLDRPDLHGRLAILKVHTRGKPLESDVDLEDLA 361
Query: 595 SMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWR-Q 653
T G GA+L N+V AAI R + I +L +A G + R SE +
Sbjct: 362 RQTPGFSGADLENLVNEAAILAARRNKKTIGRRELYEAIDRVVAGPERKSRRISEREKLM 421
Query: 654 VAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHI 713
A +EA A+VA P + V+I R G GY R+ + +F +++ +
Sbjct: 422 TAYHEAGHALVARMLPHADPVHKVSIVAR-GMMGGYTRVLPEEDRF---FWTKKQFEAQL 477
Query: 714 TVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFVLG-GLSDK----HFGLSNFWV- 767
V +A A+EL E +ST A + A + AR V G+S++ FG V
Sbjct: 478 AVFMAGLVAEELVFQE--VSTGAANDIERATTLARRMVTEFGMSERLGPLAFGRKEELVF 535
Query: 768 -----------ADRIN-EIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTK 815
+D++ EID E R+++ Y+ AK+IL + + L+ + LVEK++L
Sbjct: 536 LGREIAEQRNYSDQVAYEIDQEVRRLIDQAYQTAKQILLDHMDKLEKIATLLVEKETLDG 595
Query: 816 QEFFHLVELHGSLEPMP-PSIV 836
E L + EP P P +V
Sbjct: 596 HEIEALFD-----EPRPRPELV 612
>sp|Q55700|FTSH2_SYNY3 ATP-dependent zinc metalloprotease FtsH 2 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=ftsH2 PE=1 SV=1
Length = 627
Score = 284 bits (727), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 179/465 (38%), Positives = 263/465 (56%), Gaps = 33/465 (7%)
Query: 387 AMQFMKSGARVRRAYGKGLPQYLERGVD------------VKFSDMYRRRGVRIPGGILL 434
AM F KS AR + G+ G+D +K + + G +IP G+LL
Sbjct: 151 AMNFGKSKARFQMDAKTGVMFDDVAGIDEAKEELQEVVTFLKQPERFTAVGAKIPKGVLL 210
Query: 435 CGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFI 494
GPPG GKTLLAKA+AGEAGV FFSIS S+FVE++VGVGASRVR L+++AK+NAP ++FI
Sbjct: 211 VGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFI 270
Query: 495 DELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRP 554
DE+DAVGR+RG G G ER+ TLNQLL +DGFEG +I IA+TNRPD+LD AL+RP
Sbjct: 271 DEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDSALMRP 330
Query: 555 GRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAI 614
GRFDR++ + P GR EIL+VHAR K +A +V ++A T G GA+LAN++ AAI
Sbjct: 331 GRFDRQVMVDAPDYSGRKEILEVHARNKKLAPEVSIDSIARRTPGFSGADLANLLNEAAI 390
Query: 615 NMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNI 674
R ++ IT ++ A GM S++ R +A +E A+V D +
Sbjct: 391 LTARRRKSAITLLEIDDAVDRVVAGMEGTPLVDSKSKRLIAYHEVGHAIVGTLLKDHDPV 450
Query: 675 EFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLST 734
+ VT+ PR G+ G + ++G+ ++ L+ I + RAA+E G+ +++T
Sbjct: 451 QKVTLIPR-GQAQGLTWFTPNE---EQGLTTKAQLMARIAGAMGGRAAEEEVFGDDEVTT 506
Query: 735 IWAETADNARSAARTFV-------LGGLSDKHFGLSNFWVADRIN----------EIDTE 777
AR V LG +S + G F +N ID +
Sbjct: 507 GAGGDLQQVTEMARQMVTRFGMSNLGPISLESSGGEVFLGGGLMNRSEYSEEVATRIDAQ 566
Query: 778 ALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLV 822
++ ++ A++I+Q R ++D +V+ L+EK+++ +EF +V
Sbjct: 567 VRQLAEQGHQMARKIVQEQREVVDRLVDLLIEKETIDGEEFRQIV 611
>sp|Q1XDF9|FTSH_PORYE ATP-dependent zinc metalloprotease FtsH OS=Porphyra yezoensis
GN=ftsH PE=3 SV=1
Length = 628
Score = 284 bits (726), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 170/417 (40%), Positives = 242/417 (58%), Gaps = 23/417 (5%)
Query: 425 GVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEA 484
G +IP G+LL GPPG GKTLLAKA+AGEA V FFSIS S+FVE++VGVGASRVR L+++A
Sbjct: 202 GAKIPKGVLLVGPPGTGKTLLAKAIAGEASVPFFSISGSEFVEMFVGVGASRVRDLFKKA 261
Query: 485 KDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRP 544
KDNAP +VFIDE+DAVGR+RG G G ER+ TLNQLL +DGFEG VI IA+TNR
Sbjct: 262 KDNAPCIVFIDEIDAVGRQRGTGVGGGNDEREQTLNQLLTEMDGFEGNTGVIVIAATNRA 321
Query: 545 DILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAE 604
DILD AL+RPGRFDR++ + P GR+ IL+VHA+ K M V +A T G GA+
Sbjct: 322 DILDSALLRPGRFDRQVSVDVPDFKGRLAILEVHAKNKKMEPKVSLETIARRTPGFSGAD 381
Query: 605 LANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQVAINEAAMAVV 664
LAN++ AAI R + +T ++ + GM S++ R +A +E A++
Sbjct: 382 LANLLNEAAILTARRRKNAMTMSEIDTSIDRVVAGMEGTPLIDSKSKRLIAYHEVGHAII 441
Query: 665 AVNFPDLKNIEFVTIAPRA-GRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAAD 723
++ VT+ PR R L + D + ++SR +L I L RAA+
Sbjct: 442 GSLLEHHDPVQKVTLIPRGQARGLTWFTPSDD-----QSLISRSQILARIVGALGGRAAE 496
Query: 724 ELWCGEGQLSTIWAETADNARSAARTFV-------LGGLS----------DKHFGLSNFW 766
E+ G+ +++T + S AR V +G LS + G + +
Sbjct: 497 EIIFGDAEVTTGASNDLQQVTSMARQMVTRFGMSKIGPLSLESQGGDPFLGRGMGGGSEY 556
Query: 767 VADRINEIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLVE 823
+ ID + I++ CY +AK I+ NR ++D +V+ L+EK+++ EF +V+
Sbjct: 557 SDEVATNIDKQVREIVSECYAQAKHIIIDNRVVIDRLVDLLIEKETIEGNEFRDIVK 613
>sp|D1BLD0|FTSH_VEIPT ATP-dependent zinc metalloprotease FtsH OS=Veillonella parvula
(strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) GN=ftsH
PE=3 SV=1
Length = 642
Score = 283 bits (725), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 180/426 (42%), Positives = 249/426 (58%), Gaps = 27/426 (6%)
Query: 425 GVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEA 484
G +IP G+LL GPPG GKTLLAKAVAGEAGV FF+IS S FVE++VGVGASRVR L+ +A
Sbjct: 183 GAKIPKGVLLAGPPGTGKTLLAKAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFTQA 242
Query: 485 KDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRP 544
K NAP ++FIDE+DAVGR+RG G G ER+ TLNQLLV +DGF +ITIA+TNRP
Sbjct: 243 KKNAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGANEGIITIAATNRP 302
Query: 545 DILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAE 604
DILDPAL+RPGRFDR++ + +P L GR ILKVHAR KP+ADDVD +A T G GA+
Sbjct: 303 DILDPALLRPGRFDRQVIVGRPDLRGREAILKVHARNKPLADDVDLKIIAKKTPGFTGAD 362
Query: 605 LANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQV-AINEAAMAV 663
L+N++ AA+ R + IT ++ +A++ G R S+ R++ A +E+ A+
Sbjct: 363 LSNLLNEAALLAARLNKKVITMAEVEEASEKVSMGPERRSHIVSDKDRKLTAYHESGHAI 422
Query: 664 VAVNFPDLKNIEFVTIAPRAGRELGYVRM-KMDHMKFKEGMLSRQSLLDHITVQLAPRAA 722
VA P + VTI PR G GY M + +K ++ LL I V L R A
Sbjct: 423 VAHLLPHADPVHKVTIIPR-GAAGGYTMMLPTEEQNYK----TKSQLLADIRVALGGRIA 477
Query: 723 DELWCGEGQLSTIWAETADNARSAARTFVL-GGLSD-----------------KHFGLSN 764
+ L E +ST + + + AR V G+SD K+ G
Sbjct: 478 EALILDE--ISTGASGDLQSVTNTARAMVTRWGMSDELGPIVFGEQQEQIFLGKNLGHER 535
Query: 765 FWVADRINEIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLVEL 824
+ + +ID+E RI+ Y+ ++L N L + N L+E++++ + +L +
Sbjct: 536 NYSEEIAAKIDSEIHRIVEEAYKDVTKLLSDNEKFLHDMANALLEEETIDAKAVDNLYKY 595
Query: 825 HGSLEP 830
+ EP
Sbjct: 596 GTTKEP 601
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 315,155,648
Number of Sequences: 539616
Number of extensions: 13904450
Number of successful extensions: 113211
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 2231
Number of HSP's successfully gapped in prelim test: 2233
Number of HSP's that attempted gapping in prelim test: 87478
Number of HSP's gapped (non-prelim): 18246
length of query: 862
length of database: 191,569,459
effective HSP length: 126
effective length of query: 736
effective length of database: 123,577,843
effective search space: 90953292448
effective search space used: 90953292448
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)