BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>002970
MPLGLTEELHLVAMYSRNNEKQYPCFWAFSVGSGLYNSCLTMLNLRCLGIVFDLDETLIV
ANTMRSFEDRIEALLRKISTEVDPQRIAGMQAEVKRYQDDKNILKQYAENDQVNENGKVI
KVQSEVVPALSDSHQALVRPLIRLQEKNIILTRINPQIRDTSVLVRLRPAWEDLRSYLTA
RGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSGSRKSLFNVFQDG
TCHPKMALVIDDRLKVWDDKDQPRVHVVPAFAPYYAPQAEANNAIPVLCVARNIACNVRG
GFFKEFDEGLLQRIPEISYEDDVKDIPSPPDVSNYLVSEDDAATANGIKDPLSFDGMADA
EVERRLKEAIAASATISSAVANLDPRLAPFQYTMPSSSSTTTLPTSQAAVMPLANMQFPP
ATSLVKPLGHVGPPEQSLQSSPAREEGEVPESELDPDTRRRLLILQHGMDTRENAPSEAP
FPARTQMQVSVPRVPSRGSWFPVEEEMSPRQLNRAVPKEFPLNSEAMQIEKHRPPHPSFF
PKIENPSTSDRPHENQRMPKEALRRDDRLRLNHTLSDYQSFSGEEIPLSRSSSSSRDVDF
ESGRDVSSTETPSGVLQDIAMKCGTKVEFRPALVASTELQFSIEAWFAGEKIGEGIGRTR
REAQRQAAEGSIKHLANVYMLRVKSDSGSGHGDGSRFSNANENCFMGEINSFGGQPLAKD
ESLSSEPSKLVDPRLEGSKKLMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQ
VEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRSMFGQFPQKHQGSPRSLQGMPNKRLKPE
FPRVLQRMPPSGRYPKNAPPVP

High Scoring Gene Products

Symbol, full name Information P value
CPL1
AT4G21670
protein from Arabidopsis thaliana 1.4e-286

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  002970
        (862 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2119053 - symbol:CPL1 "C-terminal domain phosp...  2753  1.4e-286  1


>TAIR|locus:2119053 [details] [associations]
            symbol:CPL1 "C-terminal domain phosphatase-like 1"
            species:3702 "Arabidopsis thaliana" [GO:0003725 "double-stranded
            RNA binding" evidence=IEA;ISS] [GO:0005622 "intracellular"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009651
            "response to salt stress" evidence=IMP] [GO:0009738 "abscisic acid
            mediated signaling pathway" evidence=IMP] [GO:0019204 "nucleotide
            phosphatase activity" evidence=IDA] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=IMP]
            [GO:0004647 "phosphoserine phosphatase activity" evidence=IDA]
            [GO:0016791 "phosphatase activity" evidence=IDA] [GO:0009611
            "response to wounding" evidence=IMP] InterPro:IPR001159
            InterPro:IPR004274 Pfam:PF00035 Pfam:PF03031 PROSITE:PS50137
            PROSITE:PS50969 SMART:SM00358 SMART:SM00577 InterPro:IPR014720
            GO:GO:0007275 GO:GO:0005634 GO:GO:0045892 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0009611 GO:GO:0009738 GO:GO:0046872
            Gene3D:3.40.50.1000 InterPro:IPR023214 SUPFAM:SSF56784
            Gene3D:3.30.160.20 GO:GO:0006351 GO:GO:0004721 GO:GO:0003725
            EMBL:AL161555 EMBL:AL035527 EMBL:AY557186 EMBL:AK221944
            EMBL:AK229289 IPI:IPI00518313 PIR:T05842 RefSeq:NP_193898.3
            UniGene:At.2700 UniGene:At.32611 ProteinModelPortal:Q5YDB6
            SMR:Q5YDB6 IntAct:Q5YDB6 STRING:Q5YDB6 PaxDb:Q5YDB6 PRIDE:Q5YDB6
            EnsemblPlants:AT4G21670.1 GeneID:828254 KEGG:ath:AT4G21670
            TAIR:At4g21670 eggNOG:NOG244866 HOGENOM:HOG000078695
            InParanoid:Q5YDB6 OMA:SFDGMAD PhylomeDB:Q5YDB6
            ProtClustDB:CLSN2681612 Genevestigator:Q5YDB6 GO:GO:0019204
            GO:GO:0004647 GO:GO:0009628 Uniprot:Q5YDB6
        Length = 967

 Score = 2753 (974.2 bits), Expect = 1.4e-286, P = 1.4e-286
 Identities = 551/864 (63%), Positives = 647/864 (74%)

Query:     1 MPLGLTEELHLVAMYSRNNEKQYPCFWAFSVGSGLYNSCLTMLNLRCLGIVFDLDETLIV 60
             M LG  EELHLVAMYS N +   PCFWAFSV  G+Y+SCL MLNLRCLGIVFDLDETL+V
Sbjct:   110 MLLG-GEELHLVAMYSENIKNDRPCFWAFSVAPGIYDSCLVMLNLRCLGIVFDLDETLVV 168

Query:    61 ANTMRSFEDRIEALLRKISTEVDPQRIAGMQAEVKRYQDDKNILKQYAENDQVNENGKVI 120
             ANTMRSFED+I+   R+I+ E+DPQR+A + AE+KRYQDDKN+LKQY E+DQV ENG+VI
Sbjct:   169 ANTMRSFEDKIDGFQRRINNEMDPQRLAVIVAEMKRYQDDKNLLKQYIESDQVVENGEVI 228

Query:   121 KVQSEVVPALSDSHQALVRPLIRLQEKNIILTRINPQIRDTSVLVRLRPAWEDLRSYLTA 180
             KVQSE+VPALSD+HQ LVRPLIRLQEKNIILTRINP IRDTSVLVR+RP+WE+LRSYLTA
Sbjct:   229 KVQSEIVPALSDNHQPLVRPLIRLQEKNIILTRINPMIRDTSVLVRMRPSWEELRSYLTA 288

Query:   181 RGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSGSRKSLFNVFQDG 240
             +GRKRFEVYVCTMAERDYALEMWRLLDPE NLINT +LL RIVCVKSG +KSLFNVF DG
Sbjct:   289 KGRKRFEVYVCTMAERDYALEMWRLLDPEGNLINTNDLLARIVCVKSGFKKSLFNVFLDG 348

Query:   241 TCHPKMALVIDDRLKVWDDKDQPRVHVVPAFAPYYAPQAEANNAIPVLCVARNIACNVRG 300
             TCHPKMALVIDDRLKVWD+KDQPRVHVVPAFAPYY+PQAEA  A PVLCVARN+AC VRG
Sbjct:   349 TCHPKMALVIDDRLKVWDEKDQPRVHVVPAFAPYYSPQAEAA-ATPVLCVARNVACGVRG 407

Query:   301 GFFKEFDEGLLQRIPEISYEDDVKDIPSPPDVSNYLVSEDDAATANGIKDPLSFDGMADA 360
             GFF++FD+ LL RI EISYE+D +DIPSPPDVS+YLVSEDD +  NG KDPLSFDGMAD 
Sbjct:   408 GFFRDFDDSLLPRIAEISYENDAEDIPSPPDVSHYLVSEDDTSGLNGNKDPLSFDGMADT 467

Query:   361 EVERRLKEXXXXXXXXXXXXXNLDPRLA-PFQYXXXXXXXXXX---XXXXQAAVMPLANM 416
             EVERRLKE             N+DPR+A P Q+                 Q A+ P A M
Sbjct:   468 EVERRLKEAISASSAVLPAA-NIDPRIAAPVQFPMASASSVSVPVPVQVVQQAIQPSA-M 525

Query:   417 QFP--PATSLVKPLG---HVGPPEQSLQSSPAREEGEVPESELDPDTRRRLLILQHGMDT 471
              FP  P     +P     H+ P E SLQSSPAREEGEVPESELDPDTRRRLLILQHG DT
Sbjct:   526 AFPSIPFQQPQQPTSIAKHLVPSEPSLQSSPAREEGEVPESELDPDTRRRLLILQHGQDT 585

Query:   472 RENAPSEAPFPARTQMQVSVPRVPSRGSWFPVEEEMSPRQLNRAVPKEFPLNSEAMQIEK 531
             R+ APSE  FP R  +Q     V SR  WFPVEEEM P Q+ RAV KE+PL+SE + +EK
Sbjct:   586 RDPAPSEPSFPQRPPVQAPPSHVQSRNGWFPVEEEMDPAQIRRAVSKEYPLDSEMIHMEK 645

Query:   532 HRPPHPSFFPKIENPSTSDRP-HENQRMPKEALRRDDRLRLNHTLSDYQSFSGEEIPLXX 590
             HRP HPSFF KI+N + SDR  HEN+R PKE+LRRD++LR N+ L D   F GE+     
Sbjct:   646 HRPRHPSFFSKIDNSTQSDRMLHENRRPPKESLRRDEQLRSNNNLPDSHPFYGEDASWNQ 705

Query:   591 XXXXXXDVDFESGRDVSSTETPSGVLQDIAMKCGTKVEFRPALVASTELQFSIEAWFAGE 650
                   D+DF   R VS+TET + VL  IA+KCG KVE++P+LV+ST+L+FS+EAW + +
Sbjct:   706 SSSRNSDLDFLPERSVSATETSADVLHGIAIKCGAKVEYKPSLVSSTDLRFSVEAWLSNQ 765

Query:   651 KIGEGIGRTXXXXXXXXXXGSIKHLANVYMLRVKXXXXXXXXXXXRFSNANENCFMGEIN 710
             KIGEGIG++           SI++LA+ YM R              F+N  EN  MG  N
Sbjct:   766 KIGEGIGKSRREALHKAAEASIQNLADGYM-RANGDPGPSHRDATPFTN--ENISMGNAN 822

Query:   711 SFGGQPLAKDESLSSEPSKLVDPRLEGSKKLMGSVSALKELCMTEGLGVVFQQQPPSSAN 770
             +   QP A+DE+     S+  DPRLEGS +  GS++AL+ELC +EGL + FQ Q    ++
Sbjct:   823 ALNNQPFARDETALPVSSRPTDPRLEGSMRHTGSITALRELCASEGLEMAFQSQRQLPSD 882

Query:   771 SVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRSMFGQFPQKHQGSPRSLQ 830
              V +DE++AQVEIDG+V+G+G+GSTWDEA+MQAAE+AL S+RSM GQ   K QGSPRS  
Sbjct:   883 MVHRDELHAQVEIDGRVVGEGVGSTWDEARMQAAERALSSVRSMLGQPLHKRQGSPRSFG 942

Query:   831 GMPNKRLKPEFPRVLQRMPPSGRY 854
             GM NKRLKP+F R LQRMP SGRY
Sbjct:   943 GMSNKRLKPDFQRSLQRMPSSGRY 966


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.134   0.393    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      862       806   0.00098  121 3  11 22  0.42    34
                                                     37  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  624 (66 KB)
  Total size of DFA:  390 KB (2190 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  74.45u 0.12s 74.57t   Elapsed:  00:00:03
  Total cpu time:  74.45u 0.12s 74.57t   Elapsed:  00:00:03
  Start:  Fri May 10 06:07:00 2013   End:  Fri May 10 06:07:03 2013

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