Query 002970
Match_columns 862
No_of_seqs 394 out of 900
Neff 4.2
Searched_HMMs 29240
Date Mon Mar 25 08:28:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002970.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002970hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1qu6_A Protein kinase PKR; dsR 100.0 1.9E-31 6.6E-36 263.9 14.8 161 608-814 11-173 (179)
2 3ef0_A RNA polymerase II subun 100.0 2.5E-31 8.5E-36 290.5 15.3 249 37-373 8-315 (372)
3 3ef1_A RNA polymerase II subun 100.0 1.8E-31 6.1E-36 296.8 13.6 163 38-276 17-182 (442)
4 2l3j_A Double-stranded RNA-spe 99.9 8.7E-26 3E-30 232.9 25.2 197 610-815 4-227 (236)
5 2yt4_A Protein DGCR8; DSRBD, R 99.9 9.6E-27 3.3E-31 239.7 15.3 176 608-813 20-198 (232)
6 3qle_A TIM50P; chaperone, mito 99.8 1.8E-18 6E-23 175.6 12.9 113 163-299 56-174 (204)
7 2dix_A Interferon-inducible do 99.7 3.9E-17 1.3E-21 144.4 10.9 72 606-678 4-77 (84)
8 3adj_A F21M12.9 protein; HYL1, 99.7 2E-17 6.7E-22 143.4 8.7 69 609-677 3-74 (76)
9 1x49_A Interferon-induced, dou 99.7 2.6E-17 8.8E-22 149.6 9.1 71 608-678 12-84 (97)
10 2ght_A Carboxy-terminal domain 99.7 4E-17 1.4E-21 161.0 10.8 115 161-299 50-170 (181)
11 3adg_A F21M12.9 protein; HYL1, 99.7 1.2E-16 4E-21 137.3 9.7 67 610-676 3-72 (73)
12 3llh_A RISC-loading complex su 99.7 1.2E-16 4.1E-21 142.9 10.1 70 608-678 12-83 (90)
13 1di2_A XLRBPA, double stranded 99.7 1.2E-16 4E-21 135.8 9.4 65 611-676 1-68 (69)
14 2cpn_A TAR RNA-binding protein 99.7 2.6E-16 9E-21 140.8 11.5 74 603-677 9-85 (89)
15 3adl_A RISC-loading complex su 99.7 2.7E-16 9.3E-21 140.5 11.0 69 608-677 13-84 (88)
16 1x48_A Interferon-induced, dou 99.7 2.5E-16 8.4E-21 140.6 10.3 70 609-678 5-75 (88)
17 2hhl_A CTD small phosphatase-l 99.7 1.6E-16 5.5E-21 159.0 10.2 117 161-301 63-185 (195)
18 1t4n_A Ribonuclease III; DSRBD 99.7 5.5E-17 1.9E-21 147.1 5.8 67 610-676 6-74 (94)
19 1uhz_A Staufen (RNA binding pr 99.7 3.6E-16 1.2E-20 139.9 10.7 68 609-677 5-75 (89)
20 2khx_A Ribonuclease 3; drosha, 99.6 7.1E-17 2.4E-21 143.4 5.5 70 610-679 1-78 (85)
21 1ekz_A DSRBDIII, maternal effe 99.6 6.7E-17 2.3E-21 139.8 5.0 68 608-676 5-74 (76)
22 1x47_A DGCR8 protein; structur 99.6 7.4E-16 2.5E-20 140.1 12.1 71 608-678 14-85 (98)
23 2l2n_A Hyponastic leave 1; DSR 99.6 4.5E-16 1.5E-20 142.7 9.8 74 605-678 12-88 (103)
24 3adj_A F21M12.9 protein; HYL1, 99.6 2.7E-16 9.4E-21 136.2 6.7 71 742-813 4-74 (76)
25 1whq_A RNA helicase A; double- 99.6 7E-16 2.4E-20 140.7 9.5 70 609-678 5-76 (99)
26 2b7t_A Double-stranded RNA-spe 99.6 8.9E-16 3E-20 131.9 9.4 66 610-677 4-71 (73)
27 2cpn_A TAR RNA-binding protein 99.6 1E-15 3.5E-20 137.0 9.6 76 738-815 12-87 (89)
28 1t4o_A Ribonuclease III; RNT1P 99.6 5.2E-16 1.8E-20 145.6 7.1 67 610-676 8-76 (117)
29 1di2_A XLRBPA, double stranded 99.6 5.6E-16 1.9E-20 131.5 6.7 68 744-813 2-69 (69)
30 2khx_A Ribonuclease 3; drosha, 99.6 7.9E-16 2.7E-20 136.7 7.5 73 742-815 1-78 (85)
31 3adl_A RISC-loading complex su 99.6 1.1E-15 3.9E-20 136.5 8.1 74 740-815 13-86 (88)
32 3adg_A F21M12.9 protein; HYL1, 99.6 1.2E-15 4E-20 131.0 7.9 69 742-812 3-72 (73)
33 2dmy_A Spermatid perinuclear R 99.6 3.2E-15 1.1E-19 135.6 9.6 67 608-676 14-82 (97)
34 1whn_A Hypothetical protein ri 99.6 2.2E-15 7.5E-20 143.4 8.9 68 608-676 24-93 (128)
35 1x48_A Interferon-induced, dou 99.6 5.7E-15 1.9E-19 131.8 10.7 70 741-814 5-75 (88)
36 2l33_A Interleukin enhancer-bi 99.6 5.3E-15 1.8E-19 133.3 10.6 70 607-678 11-82 (91)
37 1x49_A Interferon-induced, dou 99.6 1.4E-15 4.9E-20 138.1 6.9 74 740-815 12-85 (97)
38 1ekz_A DSRBDIII, maternal effe 99.6 9E-16 3.1E-20 132.7 5.4 70 741-813 6-75 (76)
39 1uil_A Double-stranded RNA-bin 99.6 3.9E-15 1.3E-19 138.7 9.8 70 609-678 25-100 (113)
40 1uhz_A Staufen (RNA binding pr 99.6 2.5E-15 8.5E-20 134.5 7.9 70 741-812 5-74 (89)
41 2dix_A Interferon-inducible do 99.6 3.5E-15 1.2E-19 132.0 7.3 72 741-815 7-78 (84)
42 2ljh_A Double-stranded RNA-spe 99.5 8.3E-15 2.8E-19 137.0 9.0 65 608-677 35-101 (114)
43 2l2n_A Hyponastic leave 1; DSR 99.5 7.7E-15 2.6E-19 134.5 7.6 73 740-814 15-88 (103)
44 3shq_A UBLCP1; phosphatase, hy 99.5 5.4E-15 1.9E-19 159.0 7.5 120 164-299 162-297 (320)
45 3llh_A RISC-loading complex su 99.5 8.9E-15 3E-19 130.9 7.5 72 740-814 12-83 (90)
46 1whq_A RNA helicase A; double- 99.5 1.3E-14 4.4E-19 132.3 7.7 82 741-825 5-90 (99)
47 2b7v_A Double-stranded RNA-spe 99.5 3.2E-14 1.1E-18 121.5 9.4 66 608-678 2-69 (71)
48 2b7t_A Double-stranded RNA-spe 99.5 2.1E-14 7.2E-19 123.4 6.4 69 741-813 3-71 (73)
49 1x47_A DGCR8 protein; structur 99.5 5E-14 1.7E-18 128.1 8.9 73 740-815 14-86 (98)
50 2b7v_A Double-stranded RNA-spe 99.5 4.6E-14 1.6E-18 120.6 7.6 67 741-814 3-69 (71)
51 2dmy_A Spermatid perinuclear R 99.5 1.1E-13 3.9E-18 125.4 10.1 70 740-813 14-83 (97)
52 1t4n_A Ribonuclease III; DSRBD 99.5 3.6E-14 1.2E-18 128.8 5.7 69 742-813 6-75 (94)
53 1uil_A Double-stranded RNA-bin 99.5 4.8E-14 1.6E-18 131.4 6.2 70 742-814 26-100 (113)
54 3p1x_A Interleukin enhancer-bi 99.4 2.3E-13 7.8E-18 118.0 8.8 64 613-678 7-72 (75)
55 2ljh_A Double-stranded RNA-spe 99.4 2.7E-13 9.2E-18 126.9 8.9 68 740-814 35-102 (114)
56 2l33_A Interleukin enhancer-bi 99.4 1.4E-13 4.8E-18 124.0 6.2 68 742-813 14-81 (91)
57 1t4o_A Ribonuclease III; RNT1P 99.4 7.3E-14 2.5E-18 131.2 4.1 83 741-827 7-90 (117)
58 1whn_A Hypothetical protein ri 99.4 3.6E-13 1.2E-17 128.2 8.5 71 740-814 24-95 (128)
59 1qu6_A Protein kinase PKR; dsR 99.4 3.8E-13 1.3E-17 133.2 7.8 74 740-815 11-84 (179)
60 3p1x_A Interleukin enhancer-bi 99.4 8E-13 2.7E-17 114.6 8.4 67 740-813 5-71 (75)
61 1o0w_A Ribonuclease III, RNAse 99.4 9.9E-13 3.4E-17 136.4 10.1 70 609-678 178-250 (252)
62 2nug_A Ribonuclease III, RNAse 99.4 8.4E-13 2.9E-17 134.1 9.0 67 609-676 149-218 (221)
63 3n3w_A Ribonuclease III; nucle 99.2 6.6E-13 2.3E-17 137.9 0.0 69 609-677 176-247 (248)
64 2nug_A Ribonuclease III, RNAse 99.2 4.5E-12 1.5E-16 128.7 6.0 70 741-812 149-218 (221)
65 1o0w_A Ribonuclease III, RNAse 99.2 5.9E-12 2E-16 130.6 6.6 72 741-813 178-249 (252)
66 2yt4_A Protein DGCR8; DSRBD, R 99.2 1.6E-11 5.5E-16 126.7 8.6 71 740-813 20-90 (232)
67 2a11_A Ribonuclease III, RNAse 99.2 1.3E-12 4.5E-17 134.3 0.0 69 610-678 162-232 (242)
68 2l3j_A Double-stranded RNA-spe 99.2 5.1E-11 1.7E-15 123.0 10.0 64 609-677 160-225 (236)
69 3n3w_A Ribonuclease III; nucle 99.2 2.8E-12 9.7E-17 133.2 0.0 72 741-813 176-247 (248)
70 2a11_A Ribonuclease III, RNAse 99.1 1.2E-11 4E-16 127.3 0.0 71 741-813 161-231 (242)
71 3rv0_A K. polysporus DCR1; RNA 99.0 4.9E-11 1.7E-15 129.5 0.0 66 609-677 253-320 (341)
72 3c4b_A Endoribonuclease dicer; 98.9 1.2E-09 4E-14 113.6 8.1 65 612-677 199-263 (265)
73 3rv0_A K. polysporus DCR1; RNA 98.7 2.3E-09 8E-14 116.4 0.0 69 741-815 253-322 (341)
74 3c4b_A Endoribonuclease dicer; 98.6 5.7E-08 1.9E-12 100.9 6.6 64 742-813 200-263 (265)
75 3kbb_A Phosphorylated carbohyd 97.9 0.00011 3.6E-09 70.6 12.4 80 165-254 83-167 (216)
76 3m9l_A Hydrolase, haloacid deh 97.8 6.4E-05 2.2E-09 71.7 10.1 80 165-254 69-154 (205)
77 3ddh_A Putative haloacid dehal 97.7 0.0001 3.6E-09 69.8 9.4 80 165-254 104-184 (234)
78 3m1y_A Phosphoserine phosphata 97.6 0.00011 3.8E-09 70.0 6.9 80 165-254 74-168 (217)
79 1rku_A Homoserine kinase; phos 97.5 0.00034 1.1E-08 66.8 9.3 76 165-254 68-155 (206)
80 3e58_A Putative beta-phosphogl 97.5 0.00018 6.1E-09 67.2 7.2 80 165-254 88-172 (214)
81 4dcc_A Putative haloacid dehal 97.4 0.00027 9.4E-09 68.7 8.2 84 166-254 112-200 (229)
82 2hdo_A Phosphoglycolate phosph 97.4 0.00058 2E-08 64.9 10.1 79 165-254 82-165 (209)
83 3kzx_A HAD-superfamily hydrola 97.4 0.00042 1.5E-08 66.8 9.2 80 165-254 102-187 (231)
84 1nnl_A L-3-phosphoserine phosp 97.4 0.00014 4.8E-09 70.4 5.7 47 165-214 85-132 (225)
85 2pib_A Phosphorylated carbohyd 97.4 0.00063 2.1E-08 63.6 9.6 80 165-254 83-167 (216)
86 3s6j_A Hydrolase, haloacid deh 97.4 0.0013 4.5E-08 62.7 11.9 80 165-254 90-174 (233)
87 3ed5_A YFNB; APC60080, bacillu 97.4 0.0016 5.6E-08 62.2 12.5 82 165-257 102-191 (238)
88 3sd7_A Putative phosphatase; s 97.4 0.0007 2.4E-08 65.8 10.0 80 165-254 109-194 (240)
89 4ex6_A ALNB; modified rossman 97.3 0.00036 1.2E-08 67.3 7.4 79 166-254 104-187 (237)
90 2nyv_A Pgpase, PGP, phosphogly 97.3 0.00078 2.7E-08 65.7 9.8 80 165-254 82-166 (222)
91 3u26_A PF00702 domain protein; 97.3 0.00025 8.6E-09 67.9 6.1 84 165-259 99-189 (234)
92 3qnm_A Haloacid dehalogenase-l 97.2 0.0012 4.1E-08 63.1 9.7 79 165-254 106-189 (240)
93 1zrn_A L-2-haloacid dehalogena 97.2 0.0012 4E-08 63.7 9.4 80 165-254 94-178 (232)
94 1yns_A E-1 enzyme; hydrolase f 97.2 0.0013 4.4E-08 67.1 10.0 82 165-254 129-214 (261)
95 4ap9_A Phosphoserine phosphata 97.2 0.00053 1.8E-08 63.9 6.5 38 166-207 79-116 (201)
96 2w43_A Hypothetical 2-haloalka 97.2 0.0014 4.9E-08 62.2 9.6 76 165-254 73-153 (201)
97 2fea_A 2-hydroxy-3-keto-5-meth 97.2 0.0011 3.8E-08 65.5 8.9 37 165-204 76-112 (236)
98 3mc1_A Predicted phosphatase, 97.1 0.001 3.5E-08 63.5 8.3 80 165-254 85-169 (226)
99 2hsz_A Novel predicted phospha 97.1 0.0015 5.2E-08 64.6 9.8 80 165-254 113-197 (243)
100 3um9_A Haloacid dehalogenase, 97.1 0.0013 4.4E-08 62.8 8.9 80 165-254 95-179 (230)
101 2zg6_A Putative uncharacterize 97.1 0.0029 1E-07 61.3 11.4 88 164-266 93-187 (220)
102 4eze_A Haloacid dehalogenase-l 97.1 0.00039 1.3E-08 73.8 5.6 40 165-207 178-217 (317)
103 2no4_A (S)-2-haloacid dehaloge 97.1 0.0017 5.9E-08 63.2 9.6 80 165-254 104-188 (240)
104 2pke_A Haloacid delahogenase-l 97.1 0.0015 5.2E-08 64.1 9.0 79 165-254 111-189 (251)
105 3umb_A Dehalogenase-like hydro 97.1 0.00042 1.4E-08 66.5 4.7 80 165-254 98-182 (233)
106 4eek_A Beta-phosphoglucomutase 97.1 0.00025 8.6E-09 69.9 3.3 80 165-254 109-195 (259)
107 3fvv_A Uncharacterized protein 97.0 0.0016 5.5E-08 63.1 8.8 45 166-214 92-136 (232)
108 2go7_A Hydrolase, haloacid deh 97.0 0.0023 7.9E-08 59.2 9.5 79 165-254 84-167 (207)
109 3kd3_A Phosphoserine phosphohy 97.0 0.0015 5.2E-08 61.3 8.2 77 167-254 83-174 (219)
110 2b0c_A Putative phosphatase; a 97.0 0.00031 1.1E-08 66.3 3.4 83 164-255 89-176 (206)
111 2hi0_A Putative phosphoglycola 97.0 0.0019 6.5E-08 63.5 9.0 79 165-254 109-192 (240)
112 2wm8_A MDP-1, magnesium-depend 97.0 0.0018 6.2E-08 62.1 8.7 80 165-254 67-147 (187)
113 3l5k_A Protein GS1, haloacid d 97.0 0.0016 5.3E-08 63.9 8.1 81 165-254 111-200 (250)
114 3smv_A S-(-)-azetidine-2-carbo 97.0 0.0009 3.1E-08 63.8 6.1 78 165-256 98-186 (240)
115 3nuq_A Protein SSM1, putative 97.0 0.0027 9.2E-08 63.8 9.8 80 165-254 141-232 (282)
116 3iru_A Phoshonoacetaldehyde hy 96.9 0.0042 1.4E-07 61.0 10.8 81 165-254 110-196 (277)
117 2p11_A Hypothetical protein; p 96.9 0.00026 8.8E-09 69.5 2.1 78 165-255 95-172 (231)
118 3k1z_A Haloacid dehalogenase-l 96.9 0.0015 5.2E-08 65.4 7.6 85 165-260 105-196 (263)
119 3nas_A Beta-PGM, beta-phosphog 96.9 0.0017 5.7E-08 62.5 7.6 76 167-254 93-173 (233)
120 2i6x_A Hydrolase, haloacid deh 96.9 0.00084 2.9E-08 63.8 5.3 87 164-255 87-178 (211)
121 1qq5_A Protein (L-2-haloacid d 96.8 0.0037 1.2E-07 61.8 9.3 78 165-254 92-174 (253)
122 3qxg_A Inorganic pyrophosphata 96.7 0.0021 7.2E-08 62.7 6.8 81 165-254 108-193 (243)
123 3dv9_A Beta-phosphoglucomutase 96.7 0.0027 9.3E-08 61.2 7.3 81 165-254 107-192 (247)
124 4g9b_A Beta-PGM, beta-phosphog 96.7 0.0054 1.8E-07 61.1 9.6 73 166-254 95-176 (243)
125 3p96_A Phosphoserine phosphata 96.7 0.0021 7.3E-08 69.7 6.9 41 166-209 256-296 (415)
126 3umc_A Haloacid dehalogenase; 96.6 0.002 6.7E-08 62.6 5.5 77 165-254 119-200 (254)
127 3umg_A Haloacid dehalogenase; 96.6 0.0023 7.8E-08 61.7 5.6 77 165-254 115-196 (254)
128 3skx_A Copper-exporting P-type 96.5 0.01 3.6E-07 58.7 10.2 71 166-254 144-215 (280)
129 2fi1_A Hydrolase, haloacid deh 96.4 0.0085 2.9E-07 55.7 8.5 75 167-254 83-162 (190)
130 3vay_A HAD-superfamily hydrola 96.4 0.0075 2.6E-07 57.6 8.0 77 165-257 104-187 (230)
131 2qlt_A (DL)-glycerol-3-phospha 96.3 0.0074 2.5E-07 60.9 8.0 79 165-254 113-204 (275)
132 3bwv_A Putative 5'(3')-deoxyri 96.2 0.0042 1.4E-07 58.9 5.2 69 165-255 68-139 (180)
133 4gib_A Beta-phosphoglucomutase 96.2 0.015 5.1E-07 58.0 9.2 73 166-254 116-197 (250)
134 1l7m_A Phosphoserine phosphata 95.8 0.021 7.1E-07 53.5 7.7 40 166-208 76-115 (211)
135 2g80_A Protein UTR4; YEL038W, 95.8 0.011 3.6E-07 60.8 6.1 79 165-254 124-214 (253)
136 3n28_A Phosphoserine phosphata 95.6 0.021 7.3E-07 59.8 7.7 42 165-209 177-218 (335)
137 2gmw_A D,D-heptose 1,7-bisphos 95.4 0.02 6.9E-07 56.2 6.3 39 166-207 50-103 (211)
138 3i28_A Epoxide hydrolase 2; ar 95.2 0.043 1.5E-06 58.5 8.6 74 165-254 99-187 (555)
139 2p9j_A Hypothetical protein AQ 95.1 0.04 1.4E-06 51.1 7.0 75 166-254 36-110 (162)
140 2i7d_A 5'(3')-deoxyribonucleot 94.9 0.042 1.4E-06 52.7 6.8 39 165-206 72-111 (193)
141 2i33_A Acid phosphatase; HAD s 94.8 0.0083 2.8E-07 62.2 1.6 38 166-206 101-141 (258)
142 3ib6_A Uncharacterized protein 94.4 0.029 9.9E-07 53.9 4.3 85 165-259 33-131 (189)
143 1q92_A 5(3)-deoxyribonucleotid 94.3 0.046 1.6E-06 52.7 5.6 39 165-206 74-113 (197)
144 3ocu_A Lipoprotein E; hydrolas 93.8 0.069 2.3E-06 56.3 6.1 75 166-253 101-182 (262)
145 2ah5_A COG0546: predicted phos 93.7 0.079 2.7E-06 51.0 5.8 78 165-254 83-164 (210)
146 2kou_A Dicer-like protein 4; A 93.2 0.15 5.3E-06 46.6 6.6 68 742-815 4-82 (102)
147 3pct_A Class C acid phosphatas 92.8 0.35 1.2E-05 50.9 9.4 75 166-253 101-182 (260)
148 3nvb_A Uncharacterized protein 92.7 0.084 2.9E-06 58.5 4.7 80 169-254 259-338 (387)
149 2kou_A Dicer-like protein 4; A 92.6 0.28 9.6E-06 44.9 7.4 67 610-678 4-81 (102)
150 3mmz_A Putative HAD family hyd 92.6 0.08 2.7E-06 50.8 4.0 66 174-254 47-112 (176)
151 2hoq_A Putative HAD-hydrolase 92.6 0.096 3.3E-06 51.0 4.6 83 165-257 93-182 (241)
152 2fpr_A Histidine biosynthesis 92.2 0.24 8.3E-06 47.4 6.8 78 165-254 41-143 (176)
153 3mn1_A Probable YRBI family ph 91.9 0.08 2.7E-06 51.3 3.1 31 174-207 54-84 (189)
154 3zvl_A Bifunctional polynucleo 91.9 0.12 4E-06 56.9 4.7 76 167-254 88-184 (416)
155 1k1e_A Deoxy-D-mannose-octulos 91.8 0.14 4.8E-06 48.9 4.5 38 169-209 38-75 (180)
156 2gfh_A Haloacid dehalogenase-l 91.1 0.15 5.2E-06 51.3 4.2 85 165-260 120-211 (260)
157 2hcf_A Hydrolase, haloacid deh 90.7 0.54 1.8E-05 44.7 7.4 80 165-254 92-180 (234)
158 3ij5_A 3-deoxy-D-manno-octulos 90.5 0.13 4.4E-06 51.6 3.0 32 174-208 84-115 (211)
159 1y8a_A Hypothetical protein AF 90.3 0.071 2.4E-06 56.0 0.9 36 167-206 104-139 (332)
160 3htx_A HEN1; HEN1, small RNA m 90.0 0.33 1.1E-05 58.9 6.4 66 608-676 15-94 (950)
161 2b82_A APHA, class B acid phos 89.9 0.081 2.8E-06 52.6 0.9 37 167-206 89-125 (211)
162 2pr7_A Haloacid dehalogenase/e 89.4 0.075 2.6E-06 46.9 0.3 79 167-255 19-102 (137)
163 2db2_A KIAA0890 protein; DSRM 87.8 0.82 2.8E-05 43.0 6.0 67 611-678 18-90 (119)
164 1qyi_A ZR25, hypothetical prot 87.3 0.34 1.1E-05 53.4 3.7 52 165-226 214-267 (384)
165 1te2_A Putative phosphatase; s 86.8 0.86 2.9E-05 42.7 5.7 79 166-254 94-177 (226)
166 2db2_A KIAA0890 protein; DSRM 86.7 0.47 1.6E-05 44.6 3.8 37 778-815 52-91 (119)
167 3n07_A 3-deoxy-D-manno-octulos 86.7 0.29 9.8E-06 48.3 2.5 30 175-207 61-90 (195)
168 3cnh_A Hydrolase family protei 86.0 0.39 1.3E-05 45.0 3.0 78 166-254 86-168 (200)
169 2om6_A Probable phosphoserine 85.7 0.74 2.5E-05 43.5 4.7 80 167-256 100-189 (235)
170 4as2_A Phosphorylcholine phosp 85.2 1.5 5.1E-05 47.2 7.4 38 166-206 143-180 (327)
171 3d6j_A Putative haloacid dehal 84.6 1.4 4.8E-05 41.2 6.0 79 166-254 89-172 (225)
172 3l8h_A Putative haloacid dehal 83.2 1.1 3.7E-05 41.9 4.6 78 165-254 26-128 (179)
173 4fe3_A Cytosolic 5'-nucleotida 83.0 1.8 6.1E-05 44.5 6.5 40 165-207 140-179 (297)
174 3r4c_A Hydrolase, haloacid deh 76.0 1.3 4.5E-05 43.9 2.8 12 49-60 14-25 (268)
175 3a1c_A Probable copper-exporti 74.7 3 0.0001 42.6 5.1 73 165-254 162-234 (287)
176 1xpj_A Hypothetical protein; s 73.2 1.8 6.2E-05 39.6 2.7 14 49-62 3-16 (126)
177 3zx4_A MPGP, mannosyl-3-phosph 73.0 0.85 2.9E-05 45.6 0.5 15 48-62 1-15 (259)
178 3gyg_A NTD biosynthesis operon 72.9 1.9 6.6E-05 43.5 3.1 16 47-62 22-37 (289)
179 2c4n_A Protein NAGD; nucleotid 72.4 1.4 4.7E-05 41.9 1.8 14 49-62 5-18 (250)
180 3dao_A Putative phosphatse; st 72.1 1.9 6.4E-05 43.8 2.8 31 48-78 22-52 (283)
181 3epr_A Hydrolase, haloacid deh 72.0 1.8 6.2E-05 43.2 2.7 28 49-78 7-34 (264)
182 1wr8_A Phosphoglycolate phosph 71.7 2.1 7.2E-05 42.1 3.1 28 49-78 5-33 (231)
183 2oda_A Hypothetical protein ps 71.7 2.9 9.9E-05 40.8 4.0 36 165-203 35-70 (196)
184 3pdw_A Uncharacterized hydrola 70.9 2.1 7.1E-05 42.5 2.8 28 49-78 8-35 (266)
185 2rbk_A Putative uncharacterize 70.5 2.1 7.3E-05 42.6 2.8 29 49-77 4-32 (261)
186 3qgm_A P-nitrophenyl phosphata 69.5 2.3 7.8E-05 42.2 2.8 28 49-78 10-37 (268)
187 3fzq_A Putative hydrolase; YP_ 69.1 2.4 8.3E-05 41.8 2.8 28 49-77 7-34 (274)
188 2hoq_A Putative HAD-hydrolase 69.0 2.2 7.4E-05 41.3 2.4 14 49-62 4-17 (241)
189 2zos_A MPGP, mannosyl-3-phosph 68.9 1.6 5.6E-05 43.6 1.6 27 49-78 4-30 (249)
190 1ltq_A Polynucleotide kinase; 68.8 1.6 5.4E-05 44.6 1.5 79 165-255 187-281 (301)
191 1te2_A Putative phosphatase; s 68.5 2.5 8.6E-05 39.4 2.7 14 49-62 11-24 (226)
192 2om6_A Probable phosphoserine 68.3 2.3 7.9E-05 40.1 2.4 14 49-62 6-19 (235)
193 2pq0_A Hypothetical conserved 68.3 2.6 8.9E-05 41.7 2.9 29 49-78 5-33 (258)
194 4dw8_A Haloacid dehalogenase-l 68.2 2.4 8.1E-05 42.3 2.6 29 49-78 7-35 (279)
195 3l7y_A Putative uncharacterize 68.0 2.5 8.6E-05 43.3 2.8 14 49-62 39-52 (304)
196 2wf7_A Beta-PGM, beta-phosphog 67.9 1.6 5.6E-05 40.8 1.3 77 166-254 91-172 (221)
197 1s2o_A SPP, sucrose-phosphatas 67.8 2.3 8E-05 42.5 2.4 27 48-76 4-30 (244)
198 2amy_A PMM 2, phosphomannomuta 67.6 3.4 0.00012 41.0 3.5 31 47-79 6-37 (246)
199 3mpo_A Predicted hydrolase of 67.6 2.4 8.2E-05 42.3 2.4 28 49-77 7-34 (279)
200 3d6j_A Putative haloacid dehal 67.3 2.7 9.1E-05 39.2 2.6 13 49-61 8-20 (225)
201 3dnp_A Stress response protein 67.1 2.5 8.7E-05 42.4 2.5 29 49-78 8-36 (290)
202 2wf7_A Beta-PGM, beta-phosphog 66.9 4.5 0.00015 37.8 4.0 14 49-62 4-17 (221)
203 1rkq_A Hypothetical protein YI 66.8 2.6 9E-05 42.8 2.6 30 49-79 7-36 (282)
204 1swv_A Phosphonoacetaldehyde h 66.6 3.6 0.00012 40.3 3.4 80 166-254 103-188 (267)
205 2x4d_A HLHPP, phospholysine ph 66.4 2.7 9.1E-05 40.8 2.5 13 49-61 14-26 (271)
206 1swv_A Phosphonoacetaldehyde h 65.5 3.2 0.00011 40.6 2.8 15 49-63 8-22 (267)
207 1yv9_A Hydrolase, haloacid deh 65.2 3.1 0.0001 41.2 2.7 27 49-77 7-33 (264)
208 2hcf_A Hydrolase, haloacid deh 64.9 1.9 6.6E-05 40.8 1.1 14 49-62 6-19 (234)
209 3pgv_A Haloacid dehalogenase-l 64.2 3.5 0.00012 41.7 2.9 30 48-78 22-51 (285)
210 2fue_A PMM 1, PMMH-22, phospho 64.0 4 0.00014 41.1 3.3 29 48-78 14-43 (262)
211 2o2x_A Hypothetical protein; s 63.7 4.6 0.00016 39.3 3.5 38 166-206 56-108 (218)
212 2fdr_A Conserved hypothetical 63.5 7.6 0.00026 36.5 4.9 77 165-254 86-170 (229)
213 1nf2_A Phosphatase; structural 63.1 3.7 0.00013 41.3 2.9 26 49-76 4-30 (268)
214 3cnh_A Hydrolase family protei 62.6 2.3 8E-05 39.7 1.2 14 49-62 6-19 (200)
215 2yj3_A Copper-transporting ATP 66.5 1.6 5.4E-05 44.5 0.0 75 164-254 134-208 (263)
216 2ho4_A Haloacid dehalogenase-l 62.4 2.6 9E-05 41.0 1.6 29 168-201 124-152 (259)
217 2fdr_A Conserved hypothetical 62.2 2.4 8.2E-05 40.0 1.2 14 49-62 6-19 (229)
218 1rlm_A Phosphatase; HAD family 61.9 3.9 0.00013 41.1 2.8 28 49-78 5-34 (271)
219 2ah5_A COG0546: predicted phos 60.9 2.5 8.6E-05 40.4 1.1 14 49-62 6-19 (210)
220 3htx_A HEN1; HEN1, small RNA m 60.8 7.9 0.00027 47.4 5.5 36 776-812 58-94 (950)
221 4gxt_A A conserved functionall 60.7 6.2 0.00021 43.2 4.3 41 165-208 220-260 (385)
222 1vjr_A 4-nitrophenylphosphatas 60.5 3 0.0001 41.3 1.6 28 47-76 17-44 (271)
223 1nrw_A Hypothetical protein, h 59.4 4.5 0.00015 41.1 2.7 28 49-77 6-33 (288)
224 2obb_A Hypothetical protein; s 59.1 3.5 0.00012 39.6 1.7 30 49-78 5-37 (142)
225 2gfh_A Haloacid dehalogenase-l 58.4 3 0.0001 41.8 1.2 15 48-62 19-33 (260)
226 3f9r_A Phosphomannomutase; try 57.4 5.5 0.00019 40.3 3.0 29 49-78 6-34 (246)
227 1xvi_A MPGP, YEDP, putative ma 53.8 4.2 0.00014 41.3 1.4 30 48-78 10-39 (275)
228 3e8m_A Acylneuraminate cytidyl 52.6 4.4 0.00015 37.3 1.2 67 174-254 39-105 (164)
229 2b30_A Pvivax hypothetical pro 52.5 6.9 0.00024 40.5 2.8 28 49-78 29-58 (301)
230 1u02_A Trehalose-6-phosphate p 50.9 8.7 0.0003 38.3 3.1 12 49-60 3-14 (239)
231 2oda_A Hypothetical protein ps 50.1 4.8 0.00016 39.2 1.1 12 49-60 8-19 (196)
232 2pr7_A Haloacid dehalogenase/e 47.4 9.9 0.00034 33.1 2.6 11 49-59 4-14 (137)
233 2hx1_A Predicted sugar phospha 47.0 6.8 0.00023 39.4 1.7 35 41-78 9-43 (284)
234 3kc2_A Uncharacterized protein 44.4 20 0.00069 38.8 4.9 34 169-205 32-69 (352)
235 2oyc_A PLP phosphatase, pyrido 43.2 8.4 0.00029 39.4 1.7 36 40-78 15-50 (306)
236 1l6r_A Hypothetical protein TA 43.0 9.2 0.00032 37.9 1.9 28 49-78 7-35 (227)
237 1zjj_A Hypothetical protein PH 39.7 11 0.00037 37.6 1.8 27 49-77 3-29 (263)
238 3a1c_A Probable copper-exporti 36.4 10 0.00034 38.7 1.0 14 49-62 34-47 (287)
239 2r8e_A 3-deoxy-D-manno-octulos 32.6 13 0.00044 35.5 1.0 67 174-254 61-127 (188)
240 3l8h_A Putative haloacid dehal 32.3 14 0.00049 34.2 1.2 13 49-61 3-15 (179)
241 3n1u_A Hydrolase, HAD superfam 30.2 20 0.00068 34.6 1.9 30 175-207 55-84 (191)
242 2r8e_A 3-deoxy-D-manno-octulos 30.0 43 0.0015 31.8 4.2 14 48-61 27-40 (188)
243 3n1u_A Hydrolase, HAD superfam 29.7 17 0.00057 35.2 1.2 13 49-61 21-33 (191)
244 2qvw_A GLP_546_48378_50642; di 28.2 7.9 0.00027 46.4 -1.6 41 610-677 447-497 (756)
245 3e8m_A Acylneuraminate cytidyl 27.7 38 0.0013 30.9 3.3 14 49-62 6-19 (164)
246 3ewi_A N-acylneuraminate cytid 26.1 21 0.0007 34.4 1.2 25 175-204 45-69 (168)
247 3ib6_A Uncharacterized protein 25.5 22 0.00074 33.7 1.2 12 49-60 5-16 (189)
248 3k6q_A Putative ligand binding 25.4 1.5E+02 0.0051 28.8 6.9 61 611-680 39-99 (139)
249 2qv6_A MJ0145, GTP cyclohydrol 24.1 60 0.0021 34.4 4.3 28 650-678 212-239 (268)
250 2o2x_A Hypothetical protein; s 22.0 46 0.0016 32.1 2.8 14 48-61 32-45 (218)
No 1
>1qu6_A Protein kinase PKR; dsRNA-binding domain, solution structure, transferase; NMR {Homo sapiens} SCOP: d.50.1.1 d.50.1.1
Probab=99.97 E-value=1.9e-31 Score=263.87 Aligned_cols=161 Identities=20% Similarity=0.196 Sum_probs=132.3
Q ss_pred CCCCchHHHHHHHHhcCCCeEEEEeee--cCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHhhhhccccC
Q 002970 608 STETPSGVLQDIAMKCGTKVEFRPALV--ASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLANVYMLRVKS 685 (862)
Q Consensus 608 ~~~n~KS~LQE~~QK~~~~l~Y~~v~~--~~Hdk~Ftv~V~i~G~~~G~G~GkSKKeAEq~AA~~AL~~L~~~~~a~~~~ 685 (862)
.++|||+.||||+|+++..++|+++.+ ++|+++|+++|+|+|+.+|+|.|+|||+|||+||+.||+.|..... +
T Consensus 11 ~~~n~ks~LqE~~q~~~~~p~Y~~~~~~Gp~h~~~F~~~v~v~g~~~~~G~G~sKK~Aeq~AA~~al~~L~~~~~----~ 86 (179)
T 1qu6_A 11 SAGFFMEELNTYRQKQGVVLKYQELPNSGPPHDRRFTFQVIIDGREFPEGEGRSKKEAKNAAAKLAVEILNKEKK----A 86 (179)
T ss_dssp SSCSHHHHHHHHHHHHTCCCEEEEEESCBTTTBCCEEEEEESSSSCCCEEECCSSHHHHHHHHHHHHHHHHSCCS----C
T ss_pred CCCCHHHHHHHHHHhCCCCCeEEEeeccCCCCCCeEEEEEEECCEEEEecCCCCHHHHHHHHHHHHHHHHhcccc----c
Confidence 457899999999999998799998754 6799999999999999999999999999999999999999975321 0
Q ss_pred CCCCCCCCCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCcCCccccCCcCCCCchHHHHHHhhhcCCCceeeecC
Q 002970 686 DSGSGHGDGSRFSNANENCFMGEINSFGGQPLAKDESLSSEPSKLVDPRLEGSKKLMGSVSALKELCMTEGLGVVFQQQP 765 (862)
Q Consensus 686 ~~~~~~sD~~~~p~~~eN~f~~~~~s~~~~~~~~~d~~ss~~srl~~~~ld~~~~~~N~V~lLnELcqkeGL~~~f~~e~ 765 (862)
.++.. .+. . +.++ ....+|||++|||||++.++.+.|...
T Consensus 87 ------~~p~~------------------~~~--~--~~~e-----------~~~~~n~~~~L~E~~qk~~~~~~Y~~~- 126 (179)
T 1qu6_A 87 ------VSPLL------------------LTT--T--NSSE-----------GLSMGNYIGLINRIAQKKRLTVNYEQC- 126 (179)
T ss_dssp ------CSCSS------------------CCC--S--CSSC-----------CCCCCCCHHHHHHHHHHSCCEEEEEEE-
T ss_pred ------CCCcc------------------CCC--C--Cccc-----------ccCCCCHHHHHHHHHHhcCCcceEEec-
Confidence 00000 000 0 0000 013469999999999999999877643
Q ss_pred CCCCCCCCCccEEEEEEECCEEEeeeecCCHHHHHHHHHHHHHHHhhcc
Q 002970 766 PSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRSM 814 (862)
Q Consensus 766 v~~sGp~H~keF~aqV~IdGkvyG~GtGsSKKeAKqqAAe~AL~aL~~~ 814 (862)
.+|++|.+.|+++|+|+|+.|+.|+|+|||+||++||+.||..|...
T Consensus 127 --~~G~~h~~~F~~~v~v~~~~~~~g~g~sKK~Ak~~AA~~al~~L~~~ 173 (179)
T 1qu6_A 127 --ASGVHGPEGFHYKCKMGQKEYSIGTGSTKQEAKQLAAKLAYLQILSE 173 (179)
T ss_dssp --EECSSSSSEEEEEEEEETTBCCEEEESSHHHHHHHHHHHHHHHHHHC
T ss_pred --CcCCCCCCeEEEEEEECCEEEeeEEECCHHHHHHHHHHHHHHHHhcc
Confidence 58999999999999999999999999999999999999999999753
No 2
>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}
Probab=99.97 E-value=2.5e-31 Score=290.47 Aligned_cols=249 Identities=19% Similarity=0.307 Sum_probs=188.5
Q ss_pred HHHHHHHhccceeEEEeCcchhhhhccccchHHHHHHHHhhhccCCChhhhhhhHHHHHHhhhhHHHHHHHhhcCccccC
Q 002970 37 NSCLTMLNLRCLGIVFDLDETLIVANTMRSFEDRIEALLRKISTEVDPQRIAGMQAEVKRYQDDKNILKQYAENDQVNEN 116 (862)
Q Consensus 37 ~~~~~ll~~r~L~lV~DLDeTLi~a~t~~~~e~ri~~l~~~~~~~~dp~~~~~~~~e~kr~~~d~~lL~q~~~~d~v~~n 116 (862)
++..|||..+|++||||||||||++.... . ...|.+...+|+. ...++|+.|+.
T Consensus 8 ~~~~rl~~~~k~~LVlDLD~TLvhS~~~~----~---~~~w~~~~~~~~~--~~~~dv~~f~~----------------- 61 (372)
T 3ef0_A 8 ENVKRLRQEKRLSLIVDLDQTIIHATVDP----T---VGEWMSDPGNVNY--DVLRDVRSFNL----------------- 61 (372)
T ss_dssp HHHHHHHHHTCEEEEECCBTTTEEEECCT----H---HHHHHTCTTSTTT--GGGTTCEEEEE-----------------
T ss_pred HHHHHHHhCCCCEEEEcCCCCcccccCcC----c---cchhhccCCCCch--hhhhhhhceee-----------------
Confidence 45689999999999999999999997433 2 2468877777764 22233333331
Q ss_pred CeEEEeecccccCCCccccccccceeeccccceeeeecCCCCCCceEEEeeCcChHHHHHHHhhhccccEEEEEEeCCcH
Q 002970 117 GKVIKVQSEVVPALSDSHQALVRPLIRLQEKNIILTRINPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAER 196 (862)
Q Consensus 117 g~~~~~q~E~~~~~~d~~~~~~rpvirl~~~n~~ltrI~P~~r~~~~~vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R 196 (862)
...+....++|||++|||+++ ||+ +++++|||+|||+|++
T Consensus 62 ------------------------------------~~~~~~~~~~~~v~~RPg~~e---FL~-~l~~~yeivI~Tas~~ 101 (372)
T 3ef0_A 62 ------------------------------------QEGPSGYTSCYYIKFRPGLAQ---FLQ-KISELYELHIYTMGTK 101 (372)
T ss_dssp ------------------------------------EETTTTEEEEEEEEECTTHHH---HHH-HHHTTEEEEEECSSCH
T ss_pred ------------------------------------eeccCCceEEEEEEECcCHHH---HHH-HHhcCcEEEEEeCCcH
Confidence 001122346799999999999 998 8999999999999999
Q ss_pred HHHHHHHHhhCCCCCccccccccCeEEeccCC---CccchhhhccCCCCCCcEEEEEcCCcccCCCCCCCCeEEeccccc
Q 002970 197 DYALEMWRLLDPESNLINTKELLDRIVCVKSG---SRKSLFNVFQDGTCHPKMALVIDDRLKVWDDKDQPRVHVVPAFAP 273 (862)
Q Consensus 197 ~YA~~I~rlLDP~g~lFg~~~l~~RIisres~---~~KsL~~lfp~~~~~~~~vVIIDDR~dVW~~~~~~~v~vV~~Y~p 273 (862)
.||..|++.|||+++||. +||++|+++ ..|+|++||+ +++++||||||+.++|..+ + |.+.|.+|.|
T Consensus 102 ~yA~~vl~~LDp~~~~f~-----~ri~sr~~~g~~~~KdL~~L~~---~dl~~viiiDd~~~~~~~~-p-N~I~i~~~~~ 171 (372)
T 3ef0_A 102 AYAKEVAKIIDPTGKLFQ-----DRVLSRDDSGSLAQKSLRRLFP---CDTSMVVVIDDRGDVWDWN-P-NLIKVVPYEF 171 (372)
T ss_dssp HHHHHHHHHHCTTSCSSS-----SCEECTTTSSCSSCCCGGGTCS---SCCTTEEEEESCSGGGTTC-T-TEEECCCCCC
T ss_pred HHHHHHHHHhccCCceee-----eEEEEecCCCCcceecHHHhcC---CCCceEEEEeCCHHHcCCC-C-cEeeeCCccc
Confidence 999999999999999999 999999654 4699999997 7899999999999999988 3 8889999999
Q ss_pred ccCc---------h----------------------------------hh---------hccccchHHHHHHHHhhhccc
Q 002970 274 YYAP---------Q----------------------------------AE---------ANNAIPVLCVARNIACNVRGG 301 (862)
Q Consensus 274 f~~~---------q----------------------------------~e---------~~~~~p~L~~a~~vl~~Vh~~ 301 (862)
|... . +| ....+..|..++++|.+||..
T Consensus 172 f~~~~d~n~~~lp~~~~~~~~~~~~~~~~~~~q~~~~p~~~~q~~l~~~e~~~~~~~~~~~d~D~~L~~~~~~L~~iH~~ 251 (372)
T 3ef0_A 172 FVGIGDINSNFLSGNREALEEQNKERVTALELQKSERPLAKQQNALLEDEGKPTPSHTLLHNRDHELERLEKVLKDIHAV 251 (372)
T ss_dssp STTCCCTTC--------CCGGGGHHHHHHHHHHHHHCHHHHHHHHHHHSCCSCSGGGCSCCCCCCHHHHHHHHHHHHHHH
T ss_pred cCCcCccccccccccchhHHHhhhhhhhhhhhhhcccchhHHHHhhhccccccchhhccccCChHHHHHHHHHHHHHHHH
Confidence 9531 0 00 012467899999999999999
Q ss_pred chhcchhhhhhccccccccCcCCCCCCCCccccceeccccccccCCCCCccC--CCCcch--HHHHHHHHHhhhhh
Q 002970 302 FFKEFDEGLLQRIPEISYEDDVKDIPSPPDVSNYLVSEDDAATANGIKDPLS--FDGMAD--AEVERRLKEAIAAS 373 (862)
Q Consensus 302 FF~~~de~l~~ri~ev~~e~~~~~~~~~pDv~~~l~~e~~~~~~~~~~~~~~--~~g~~~--~e~~~~~~~~~~~~ 373 (862)
||.++|..... ... -..|||+. ++.+-...++.|+.+++. ..++.. .+-.+++.+..++.
T Consensus 252 Ff~~~~~~~~~-------~~~----~~~~dv~~-ii~~lk~~~L~G~~ivfSG~~~~~~~~~~~~l~~l~~~lGa~ 315 (372)
T 3ef0_A 252 YYEEENDISSR-------SGN----HKHANVGL-IIPKMKQKVLKGCRLLFSGVIPLGVDVLSSDIAKWAMSFGAE 315 (372)
T ss_dssp HHHHHHHHHHH-------TTT----SSCCCHHH-HHHHHHTTTSTTCEEEEESSSCTTSCTTTSHHHHHHHHTTCE
T ss_pred HHHHHhhhccc-------ccc----cccccHHH-HHHHHHhhhcCCcEEEEecccCCCcchhHHHHHHHHHHcCCE
Confidence 99998875443 011 12699998 667778888999999984 344443 23345555555544
No 3
>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe}
Probab=99.97 E-value=1.8e-31 Score=296.85 Aligned_cols=163 Identities=23% Similarity=0.423 Sum_probs=135.4
Q ss_pred HHHHHHhccceeEEEeCcchhhhhccccchHHHHHHHHhhhccCCChhhhhhhHHHHHHhhhhHHHHHHHhhcCccccCC
Q 002970 38 SCLTMLNLRCLGIVFDLDETLIVANTMRSFEDRIEALLRKISTEVDPQRIAGMQAEVKRYQDDKNILKQYAENDQVNENG 117 (862)
Q Consensus 38 ~~~~ll~~r~L~lV~DLDeTLi~a~t~~~~e~ri~~l~~~~~~~~dp~~~~~~~~e~kr~~~d~~lL~q~~~~d~v~~ng 117 (862)
...+||..|||.||+||||||||+... .. +.+|+.++.||+. ..+++|.+|+.
T Consensus 17 ~~~rll~~~Kl~LVLDLDeTLiHs~~~----~~---~~~~~~~~~~~~~--~~~~dv~~F~l------------------ 69 (442)
T 3ef1_A 17 NVKRLRQEKRLSLIVXLDQTIIHATVD----PT---VGEWMSDPGNVNY--DVLRDVRSFNL------------------ 69 (442)
T ss_dssp HHHHHHHTTCEEEEECCBTTTEEEECC----TH---HHHHHTCTTSTTT--GGGTTCEEEEE------------------
T ss_pred HHHHHHhcCCeEEEEeeccceeccccc----cc---cchhccCCCCcch--hhhccccceee------------------
Confidence 457899999999999999999999743 33 4689998888885 22333334431
Q ss_pred eEEEeecccccCCCccccccccceeeccccceeeeecCCCCCCceEEEeeCcChHHHHHHHhhhccccEEEEEEeCCcHH
Q 002970 118 KVIKVQSEVVPALSDSHQALVRPLIRLQEKNIILTRINPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERD 197 (862)
Q Consensus 118 ~~~~~q~E~~~~~~d~~~~~~rpvirl~~~n~~ltrI~P~~r~~~~~vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~ 197 (862)
.+.|....++|||++|||+++ ||+ +++++|||+|||+|.+.
T Consensus 70 -----------------------------------~~~~~~~~~~~~V~~RPgl~e---FL~-~ls~~yEivIfTas~~~ 110 (442)
T 3ef1_A 70 -----------------------------------QEGPSGYTSCYYIKFRPGLAQ---FLQ-KISELYELHIYTMGTKA 110 (442)
T ss_dssp -----------------------------------EETTTTEEEEEEEEECTTHHH---HHH-HHTTTEEEEEECSSCHH
T ss_pred -----------------------------------eeccCCceeEEEEEeCCCHHH---HHH-HHhCCcEEEEEcCCCHH
Confidence 111222356899999999999 999 89999999999999999
Q ss_pred HHHHHHHhhCCCCCccccccccCeEEeccCC---CccchhhhccCCCCCCcEEEEEcCCcccCCCCCCCCeEEecccccc
Q 002970 198 YALEMWRLLDPESNLINTKELLDRIVCVKSG---SRKSLFNVFQDGTCHPKMALVIDDRLKVWDDKDQPRVHVVPAFAPY 274 (862)
Q Consensus 198 YA~~I~rlLDP~g~lFg~~~l~~RIisres~---~~KsL~~lfp~~~~~~~~vVIIDDR~dVW~~~~~~~v~vV~~Y~pf 274 (862)
||..|++.|||+++||+ +||++|+++ ..|+|++||+ ++.++||||||+.++|..+ + |.+.|.+|.||
T Consensus 111 YA~~Vl~~LDp~~~~f~-----~Rl~sRd~cg~~~~KdL~~ll~---rdl~~vvIIDd~p~~~~~~-p-N~I~I~~~~fF 180 (442)
T 3ef1_A 111 YAKEVAKIIDPTGKLFQ-----DRVLSRDDSGSLAQKSLRRLFP---CDTSMVVVIDDRGDVWDWN-P-NLIKVVPYEFF 180 (442)
T ss_dssp HHHHHHHHHCTTSTTTT-----TCEECTTTSSCSSCCCGGGTCS---SCCTTEEEEESCSGGGTTC-T-TEEECCCCCCS
T ss_pred HHHHHHHHhccCCcccc-----ceEEEecCCCCceeeehHHhcC---CCcceEEEEECCHHHhCCC-C-CEEEcCCcccc
Confidence 99999999999999999 999999765 4699999997 7899999999999999988 3 78899999999
Q ss_pred cC
Q 002970 275 YA 276 (862)
Q Consensus 275 ~~ 276 (862)
..
T Consensus 181 ~~ 182 (442)
T 3ef1_A 181 VG 182 (442)
T ss_dssp TT
T ss_pred CC
Confidence 63
No 4
>2l3j_A Double-stranded RNA-specific editase 1; editing, dsRNA recognition, DSRBM, hydrolase-RNA complex; NMR {Rattus norvegicus}
Probab=99.94 E-value=8.7e-26 Score=232.90 Aligned_cols=197 Identities=21% Similarity=0.204 Sum_probs=133.8
Q ss_pred CCchHHHHHHHHhcCCCeEEEEeee--cCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHhhhhc------
Q 002970 610 ETPSGVLQDIAMKCGTKVEFRPALV--ASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLANVYML------ 681 (862)
Q Consensus 610 ~n~KS~LQE~~QK~~~~l~Y~~v~~--~~Hdk~Ftv~V~i~G~~~G~G~GkSKKeAEq~AA~~AL~~L~~~~~a------ 681 (862)
-++|+.|++|++. ...+.|+++.+ ++|+++|+|+|+|+|+.+ +|.|+|||+|||+||+.||+.|...-.+
T Consensus 4 ~~~K~~l~~l~e~-~~~p~Y~~~~~~Gp~H~~~F~~~v~v~g~~~-~G~G~SKK~Aeq~AA~~al~~l~~~~~~~~~~~a 81 (236)
T 2l3j_A 4 VLPKNALMQLNEI-KPGLQYMLLSQTGPVHAPLFVMSVEVNGQVF-EGSGPTKKKAKLHAAEKALRSFVQFPNASEAHLA 81 (236)
T ss_dssp CCTHHHHHHHHHH-CSSCEEEEEEEESCTTSCEEEEEEEETTEEE-EEEESHHHHHHHHHHHHHHHHHTTCSSCSCCCCS
T ss_pred CCCcCHHHHHhhc-CCCceEEEEeccCCCCCCeEEEEEEECCEEE-EEecCChHHHHHHHHHHHHHHHHhccccccchhh
Confidence 4689999999976 34579999764 679999999999999985 9999999999999999999999753211
Q ss_pred --cccCCCCCCCCCCCCCCCcccccccCCCCCCCCCC-CCCCCCCCCCC--CCc---------CCccccC-----CcCCC
Q 002970 682 --RVKSDSGSGHGDGSRFSNANENCFMGEINSFGGQP-LAKDESLSSEP--SKL---------VDPRLEG-----SKKLM 742 (862)
Q Consensus 682 --~~~~~~~~~~sD~~~~p~~~eN~f~~~~~s~~~~~-~~~~d~~ss~~--srl---------~~~~ld~-----~~~~~ 742 (862)
...+...++++|..+++...++++........... ....+...... ..+ -...++. .....
T Consensus 82 mg~~~~~~~d~~~d~~~~p~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~p~~~~~~~~~~~ 161 (236)
T 2l3j_A 82 MGRTLSVNTDFTSDQADFPDTLFNGFETPDKSEPPFYVGSNGDDSFSSSGDVSLSASPVPASLTQPPLPIPPPFPPPSGK 161 (236)
T ss_dssp CCCCCCCTTSCCSCCSCCCCCCCCCCCCSSSSCCCSSCSSSCSSSSSCSCCCSSCCCCCCCCSSSCSSSSCCCCCCCSSC
T ss_pred hccCCCCCCCCcccccccchhhcccccccccccccccccccccccccccchhhccccccccccccccCccccccCCCCCC
Confidence 11122345677777776655666554221110000 00000000000 000 0011100 11346
Q ss_pred CchHHHHHHhhhcCCCceeeecCCCCCCCCCCccEEEEEEECCEEEeeeecCCHHHHHHHHHHHHHHHhhccc
Q 002970 743 GSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRSMF 815 (862)
Q Consensus 743 N~V~lLnELcqkeGL~~~f~~e~v~~sGp~H~keF~aqV~IdGkvyG~GtGsSKKeAKqqAAe~AL~aL~~~~ 815 (862)
|||+.|||++. . ..|.. +..+|++|.+.|+++|+|+|++| .|+|+|||+|||+||+.||..|..+.
T Consensus 162 d~ks~LqE~~~--~--p~Y~~--~~~~Gp~h~~~F~~~v~v~~~~~-~G~G~sKK~Aeq~AA~~al~~L~~~~ 227 (236)
T 2l3j_A 162 NPVMILNELRP--G--LKYDF--LSESGESHAKSFVMSVVVDGQFF-EGSGRNKKLAKARAAQSALATVFNLH 227 (236)
T ss_dssp CHHHHHHHHCC--C--EEEEE--ECCSSSSSSCCEEEEEEETTEEE-EEEESSHHHHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHhcCC--C--CcEEE--EEeeCCCCCCeEEEEEEECCEEE-EeeeCCHHHHHHHHHHHHHHHHcccc
Confidence 99999999942 2 22332 34589999999999999999998 99999999999999999999997543
No 5
>2yt4_A Protein DGCR8; DSRBD, RNA binding domain, RNA binding protein; 2.60A {Homo sapiens}
Probab=99.94 E-value=9.6e-27 Score=239.75 Aligned_cols=176 Identities=14% Similarity=0.164 Sum_probs=121.3
Q ss_pred CCCCchHHHHHHHHhcCC-CeEEEEeeecCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHhhhhccccCC
Q 002970 608 STETPSGVLQDIAMKCGT-KVEFRPALVASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLANVYMLRVKSD 686 (862)
Q Consensus 608 ~~~n~KS~LQE~~QK~~~-~l~Y~~v~~~~Hdk~Ftv~V~i~G~~~G~G~GkSKKeAEq~AA~~AL~~L~~~~~a~~~~~ 686 (862)
...+||+.||||||+++. .+.|+++...+.++.|+++|+|+|+.||.|.|+|||+|||+||+.||..|.......++
T Consensus 20 ~~kd~ks~LqE~~q~~~~~~p~Y~~~~~~Gp~~~F~~~v~v~g~~~~~G~G~SKK~Aeq~AA~~aL~~L~~~~~~~~~-- 97 (232)
T 2yt4_A 20 NGKSEVCILHEYMQRVLKVRPVYNFFECENPSEPFGASVTIDGVTYGSGTASSKKLAKNKAARATLEILIPDFVKQTS-- 97 (232)
T ss_dssp TTSCHHHHHHHHHHHTTCCCCEEEEEECSCTTSCEEEEEEETTEEEEEEEESSHHHHHHHHHHHHHHHHSTTTTTC----
T ss_pred CCCCHHHHHHHHHHHcCCCCCeEEEEeeECCCCcEEEEEEECCEEEeecCCCCHHHHHHHHHHHHHHHHHhhccccCC--
Confidence 456899999999999986 47999987655559999999999999999999999999999999999999764221000
Q ss_pred CCCCCCCCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCcCCccccCCcCCCCchHHHHHHhhhcCCCceeee--c
Q 002970 687 SGSGHGDGSRFSNANENCFMGEINSFGGQPLAKDESLSSEPSKLVDPRLEGSKKLMGSVSALKELCMTEGLGVVFQQ--Q 764 (862)
Q Consensus 687 ~~~~~sD~~~~p~~~eN~f~~~~~s~~~~~~~~~d~~ss~~srl~~~~ld~~~~~~N~V~lLnELcqkeGL~~~f~~--e 764 (862)
.. ++..+.+. +.| + ...+. ..+.... .......||++.||| |++.++.++.|. .
T Consensus 98 -~~---~~~~~~~~--~~~--~------------~~~~~-~~~~~~~--~~~~~~~d~kt~LqE-~~~~~~~~p~Y~~~~ 153 (232)
T 2yt4_A 98 -EE---KPKDSEEL--EYF--N------------HISIE-DSRVYEL--TSKAGLLSPYQILHE-CLKRNHGMGDTSIKF 153 (232)
T ss_dssp ----------CCGG--GGG--G------------GSBTT-CTTHHHH--HHHHTCCCHHHHHHH-HHHTSSSCCCEEEEC
T ss_pred -cc---ccccccch--hhc--c------------ccccc-CCccccc--ccccCCCChhHHHHH-HHHcCCCCCceEEEE
Confidence 00 00000000 000 0 00000 0000000 001235699999999 999999888554 3
Q ss_pred CCCCCCCCCCccEEEEEEECCEEEeeeecCCHHHHHHHHHHHHHHHhhc
Q 002970 765 PPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRS 813 (862)
Q Consensus 765 ~v~~sGp~H~keF~aqV~IdGkvyG~GtGsSKKeAKqqAAe~AL~aL~~ 813 (862)
+..+|++|.+.|+++|. ..++.|+|+|||+|||+||+.||..|..
T Consensus 154 -~~~~Gp~h~~~F~~~v~---~~~~~G~G~sKK~Aeq~AA~~aL~~L~~ 198 (232)
T 2yt4_A 154 -EVVPGKNQKSEYVMACG---KHTVRGWCKNKRVGKQLASQKILQLLHP 198 (232)
T ss_dssp -C------CCEEEEEEET---TEEEEEEESSHHHHHHHHHHHHHHHHST
T ss_pred -eecCCCCCCCEEEEEEE---EEEEEEEeCCHHHHHHHHHHHHHHHHHh
Confidence 45689999999998887 5577999999999999999999999964
No 6
>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}
Probab=99.76 E-value=1.8e-18 Score=175.56 Aligned_cols=113 Identities=12% Similarity=0.096 Sum_probs=90.4
Q ss_pred EEEeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccC-----C-Cccchhhh
Q 002970 163 VLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKS-----G-SRKSLFNV 236 (862)
Q Consensus 163 ~~vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres-----~-~~KsL~~l 236 (862)
++|++|||+++ ||+ .+++.|||+|||+|.+.||+.|++.|||.+.+|. .|+ .|++ | ..|+|+.+
T Consensus 56 ~~v~~RPgl~e---FL~-~l~~~yeivI~Tas~~~ya~~vl~~LDp~~~~f~-----~rl-~R~~c~~~~g~y~KdL~~L 125 (204)
T 3qle_A 56 WRTAKRPGADY---FLG-YLSQYYEIVLFSSNYMMYSDKIAEKLDPIHAFVS-----YNL-FKEHCVYKDGVHIKDLSKL 125 (204)
T ss_dssp EEEEECTTHHH---HHH-HHTTTEEEEEECSSCHHHHHHHHHHTSTTCSSEE-----EEE-CGGGSEEETTEEECCGGGS
T ss_pred eeEEeCCCHHH---HHH-HHHhCCEEEEEcCCcHHHHHHHHHHhCCCCCeEE-----EEE-EecceeEECCeeeecHHHh
Confidence 77999999999 998 8899999999999999999999999999999998 554 4433 2 46999988
Q ss_pred ccCCCCCCcEEEEEcCCcccCCCCCCCCeEEecccccccCchhhhccccchHHHHHHHHhhhc
Q 002970 237 FQDGTCHPKMALVIDDRLKVWDDKDQPRVHVVPAFAPYYAPQAEANNAIPVLCVARNIACNVR 299 (862)
Q Consensus 237 fp~~~~~~~~vVIIDDR~dVW~~~~~~~v~vV~~Y~pf~~~q~e~~~~~p~L~~a~~vl~~Vh 299 (862)
- .+.+.||||||+...|..+. .|.+.|++|. . . .+ ..|...+.+|+.+.
T Consensus 126 g----rdl~~vIiIDDsp~~~~~~p-~N~I~I~~~~--~-~-----~D-~eL~~L~~~L~~L~ 174 (204)
T 3qle_A 126 N----RDLSKVIIIDTDPNSYKLQP-ENAIPMEPWN--G-E-----AD-DKLVRLIPFLEYLA 174 (204)
T ss_dssp C----SCGGGEEEEESCTTTTTTCG-GGEEECCCCC--S-S-----CC-CHHHHHHHHHHHHH
T ss_pred C----CChHHEEEEECCHHHHhhCc-cCceEeeeEC--C-C-----CC-hhHHHHHHHHHHHh
Confidence 3 57899999999999998874 4666788773 1 1 12 24666666676654
No 7
>2dix_A Interferon-inducible double stranded RNA- dependent protein kinase activator A; structure genomics, DSRM domain, hypothetical protein PRKRA; NMR {Homo sapiens} SCOP: d.50.1.1
Probab=99.71 E-value=3.9e-17 Score=144.42 Aligned_cols=72 Identities=24% Similarity=0.231 Sum_probs=64.8
Q ss_pred CCCCCCchHHHHHHHHhcCCCeEEEEeee--cCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHhh
Q 002970 606 VSSTETPSGVLQDIAMKCGTKVEFRPALV--ASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLANV 678 (862)
Q Consensus 606 ~~~~~n~KS~LQE~~QK~~~~l~Y~~v~~--~~Hdk~Ftv~V~i~G~~~G~G~GkSKKeAEq~AA~~AL~~L~~~ 678 (862)
.....+|||.||||||+.+..++|+++.+ ++|+++|+++|+|+| .+|+|.|+|||+|||+||+.||+.|...
T Consensus 4 ~~~~~d~Ks~LqE~~q~~~~~p~Y~~~~~~Gp~h~~~F~~~v~v~~-~~~~G~G~SKK~Aeq~AA~~aL~~L~~~ 77 (84)
T 2dix_A 4 GSSGKTPIQVLHEYGMKTKNIPVYECERSDVQIHVPTFTFRVTVGD-ITCTGEGTSKKLAKHRAAEAAINILKAN 77 (84)
T ss_dssp CCCCCCHHHHHHHHHHHTTCCCEEEEEEEECSSSSCEEEEEEEETT-EEEEECSSCTTHHHHHHHHHHHHHHHHT
T ss_pred ccCCCCHHHHHHHHHHHcCCCCeEEEEEeECCCCCCeEEEEEEECC-EEEEeeeCCHHHHHHHHHHHHHHHHhcc
Confidence 34567899999999999986789998764 679999999999999 9999999999999999999999999753
No 8
>3adj_A F21M12.9 protein; HYL1, miRNA processing, RNA binding protein, gene regulation; 3.00A {Arabidopsis thaliana} PDB: 2l2m_A
Probab=99.70 E-value=2e-17 Score=143.42 Aligned_cols=69 Identities=19% Similarity=0.183 Sum_probs=63.3
Q ss_pred CCCchHHHHHHHHhcCCC-eEEEEeee--cCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHh
Q 002970 609 TETPSGVLQDIAMKCGTK-VEFRPALV--ASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLAN 677 (862)
Q Consensus 609 ~~n~KS~LQE~~QK~~~~-l~Y~~v~~--~~Hdk~Ftv~V~i~G~~~G~G~GkSKKeAEq~AA~~AL~~L~~ 677 (862)
.+||||.||||||+.+.. ++|+++.+ ++|++.|+++|+|+|+.+|.|.|+|||+|||.||+.||+.|..
T Consensus 3 ~~n~Kt~LqE~~q~~~~~~p~Y~~~~~~Gp~h~~~F~~~v~v~g~~~~~G~G~sKK~Aeq~AA~~al~~L~~ 74 (76)
T 3adj_A 3 HGLCKNLLQEYAQKMNYAIPLYQCQKVETLGRVTQFTCTVEIGGIKYTGAATRTKKDAEISAGRTALLAIQS 74 (76)
T ss_dssp CHHHHHHHHHHHHTTTCCCCEEEEEEEECSSSCEEEEEEEEETTEEEECCCBSSHHHHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHhCCCCCeEEEeeccCCCCCCcEEEEEEECCEEEEEeccCCHHHHHHHHHHHHHHHHhh
Confidence 468999999999999865 79998764 6799999999999999999999999999999999999999864
No 9
>1x49_A Interferon-induced, double-stranded RNA- activated protein kinase; structure genomics, DSRM domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.50.1.1
Probab=99.70 E-value=2.6e-17 Score=149.55 Aligned_cols=71 Identities=17% Similarity=0.269 Sum_probs=65.6
Q ss_pred CCCCchHHHHHHHHhcCCCeEEEEeee--cCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHhh
Q 002970 608 STETPSGVLQDIAMKCGTKVEFRPALV--ASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLANV 678 (862)
Q Consensus 608 ~~~n~KS~LQE~~QK~~~~l~Y~~v~~--~~Hdk~Ftv~V~i~G~~~G~G~GkSKKeAEq~AA~~AL~~L~~~ 678 (862)
...|||+.||||||+++..++|+++.+ ++|+++|+++|+|+|+.+|+|.|+|||+|||+||+.||+.|...
T Consensus 12 ~~~n~Kt~LqE~~Q~~~~~p~Y~~~~~~Gp~H~~~F~v~v~i~g~~~~~G~G~SKK~Aeq~AA~~AL~~L~~~ 84 (97)
T 1x49_A 12 TPGFYMDKLNKYRQMHGVAITYKELSTSGPPHDRRFTFQVLIDEKEFPEAKGRSKQEARNAAAKLAVDILDNE 84 (97)
T ss_dssp CTTHHHHHHHHHHHHHTCCEEEEEEEEESCSSSCEEEEEEEESSCCCCCEEESSHHHHHHHHHHHHHHHHTTT
T ss_pred CCCCHHHHHHHHHHHcCCCCeEEEEEeeCCCCCCcEEEEEEECCEEEEEEeeCCHHHHHHHHHHHHHHHHHhh
Confidence 568999999999999988899998754 67999999999999999999999999999999999999999754
No 10
>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A
Probab=99.70 E-value=4e-17 Score=160.95 Aligned_cols=115 Identities=19% Similarity=0.118 Sum_probs=89.9
Q ss_pred ceEEEeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC------Cccchh
Q 002970 161 TSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG------SRKSLF 234 (862)
Q Consensus 161 ~~~~vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres~------~~KsL~ 234 (862)
..+++++|||+++ ||+ +++++|||.|||++.+.||..|++.|||.+ +|. . ++++++. ..|.|+
T Consensus 50 ~~~~v~~rPg~~e---fL~-~l~~~~~i~I~T~~~~~~a~~vl~~ld~~~-~f~-----~-~~~rd~~~~~k~~~~k~L~ 118 (181)
T 2ght_A 50 HQVYVLKRPHVDE---FLQ-RMGELFECVLFTASLAKYADPVADLLDKWG-AFR-----A-RLFRESCVFHRGNYVKDLS 118 (181)
T ss_dssp EEEEEEECTTHHH---HHH-HHHHHSEEEEECSSCHHHHHHHHHHHCTTC-CEE-----E-EECGGGSEEETTEEECCGG
T ss_pred EEEEEEeCCCHHH---HHH-HHHhCCCEEEEcCCCHHHHHHHHHHHCCCC-cEE-----E-EEeccCceecCCcEeccHH
Confidence 3588999999999 888 778889999999999999999999999997 787 3 4556543 458898
Q ss_pred hhccCCCCCCcEEEEEcCCcccCCCCCCCCeEEecccccccCchhhhccccchHHHHHHHHhhhc
Q 002970 235 NVFQDGTCHPKMALVIDDRLKVWDDKDQPRVHVVPAFAPYYAPQAEANNAIPVLCVARNIACNVR 299 (862)
Q Consensus 235 ~lfp~~~~~~~~vVIIDDR~dVW~~~~~~~v~vV~~Y~pf~~~q~e~~~~~p~L~~a~~vl~~Vh 299 (862)
.+. .+++.+|||||+...|.....|.| .|.+|. ..+ .+..|...+.+|+.++
T Consensus 119 ~Lg----~~~~~~vivdDs~~~~~~~~~ngi-~i~~~~--~~~------~D~eL~~l~~~L~~l~ 170 (181)
T 2ght_A 119 RLG----RDLRRVLILDNSPASYVFHPDNAV-PVASWF--DNM------SDTELHDLLPFFEQLS 170 (181)
T ss_dssp GTC----SCGGGEEEECSCGGGGTTCTTSBC-CCCCCS--SCT------TCCHHHHHHHHHHHHT
T ss_pred HhC----CCcceEEEEeCCHHHhccCcCCEe-Eecccc--CCC------ChHHHHHHHHHHHHhC
Confidence 874 578999999999999998865555 466663 211 2235777777777764
No 11
>3adg_A F21M12.9 protein; HYL1, miRNA processing mechanism, RNA binding protein, gene regulation; 1.70A {Arabidopsis thaliana} PDB: 3adi_A
Probab=99.67 E-value=1.2e-16 Score=137.28 Aligned_cols=67 Identities=22% Similarity=0.206 Sum_probs=61.9
Q ss_pred CCchHHHHHHHHhcCCC-eEEEEeee-cCCCceEEEEEEECCEEEEEeec-CCHHHHHHHHHHHHHHHHH
Q 002970 610 ETPSGVLQDIAMKCGTK-VEFRPALV-ASTELQFSIEAWFAGEKIGEGIG-RTRREAQRQAAEGSIKHLA 676 (862)
Q Consensus 610 ~n~KS~LQE~~QK~~~~-l~Y~~v~~-~~Hdk~Ftv~V~i~G~~~G~G~G-kSKKeAEq~AA~~AL~~L~ 676 (862)
.+|||.||||||+.+.. +.|+++.+ ++|++.|+++|+|+|+.+|+|.| +|||+|||.||+.||+.|.
T Consensus 3 ~d~Kt~LqE~~q~~~~~~p~Y~~~~~Gp~h~~~F~~~v~v~g~~~~~G~G~~sKK~Aeq~AA~~al~~L~ 72 (73)
T 3adg_A 3 HVFKSRLQEYAQKYKLPTPVYEIVKEGPSHKSLFQSTVILDGVRYNSLPGFFNRKAAEQSAAEVALRELA 72 (73)
T ss_dssp CSHHHHHHHHHHHTTCCCCEEEEEEESSTTSCEEEEEEEETTEEEECCSCBSSHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHcCCCCCEEEEEeECCCCCCeEEEEEEECCEEEEeeeccCCHHHHHHHHHHHHHHHhh
Confidence 47999999999999865 79999865 67999999999999999999999 9999999999999999884
No 12
>3llh_A RISC-loading complex subunit tarbp2; DSRBD, DSRM, microrna, RNA binding protein; 2.14A {Homo sapiens}
Probab=99.67 E-value=1.2e-16 Score=142.94 Aligned_cols=70 Identities=21% Similarity=0.333 Sum_probs=58.7
Q ss_pred CCCCchHHHHHHHHhcCCCeEEEEeee--cCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHhh
Q 002970 608 STETPSGVLQDIAMKCGTKVEFRPALV--ASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLANV 678 (862)
Q Consensus 608 ~~~n~KS~LQE~~QK~~~~l~Y~~v~~--~~Hdk~Ftv~V~i~G~~~G~G~GkSKKeAEq~AA~~AL~~L~~~ 678 (862)
...+|||.||||||+++..++|+++.+ ++|+++|+++|+|+|+ +|+|.|+|||+|||.||+.||+.|...
T Consensus 12 ~~kd~Ks~LqE~~q~~~~~p~Y~~~~~~Gp~H~~~F~~~v~v~g~-~~~G~G~SKK~Aeq~AA~~aL~~L~~~ 83 (90)
T 3llh_A 12 PGKTPISLLQEYGTRIGKTPVYDLLKAEGQAHQPNFTFRVTVGDT-SCTGQGPSKKAAKHKAAEVALKHLKGG 83 (90)
T ss_dssp -CCCHHHHHHHHHHHTTCCCEEEEEEEC-----CCEEEEEEETTE-EEEEEESSHHHHHHHHHHHHHHHHC--
T ss_pred cCCCHHHHHHHHHHhcCCCCEEEEEEeECCCCCCcEEEEEEECCE-EEEEEeCCHHHHHHHHHHHHHHHHHhc
Confidence 456899999999999987899998765 6799999999999998 799999999999999999999999653
No 13
>1di2_A XLRBPA, double stranded RNA binding protein A; protein-RNA complex, protein-RNA interactions, RNA-bining protein; 1.90A {Xenopus laevis} SCOP: d.50.1.1
Probab=99.67 E-value=1.2e-16 Score=135.75 Aligned_cols=65 Identities=26% Similarity=0.402 Sum_probs=59.7
Q ss_pred CchHHHHHHHHhcCCC-eEEEEeee--cCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHH
Q 002970 611 TPSGVLQDIAMKCGTK-VEFRPALV--ASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLA 676 (862)
Q Consensus 611 n~KS~LQE~~QK~~~~-l~Y~~v~~--~~Hdk~Ftv~V~i~G~~~G~G~GkSKKeAEq~AA~~AL~~L~ 676 (862)
.||+.||||||+++.. ++|+++.+ ++|++.|+++|+|+|+ +|+|.|+|||+|||.||+.||+.|.
T Consensus 1 ~p~s~LqE~~q~~~~~~p~Y~~~~~~Gp~h~~~F~~~v~v~~~-~~~G~G~sKK~Aeq~AA~~al~~L~ 68 (69)
T 1di2_A 1 MPVGSLQELAVQKGWRLPEYTVAQESGPPHKREFTITCRVETF-VETGSGTSKQVAKRVAAEKLLTKFK 68 (69)
T ss_dssp CHHHHHHHHHHHHTCCCCEEEEEEEESCGGGCEEEEEEEETTE-EEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCCCEEEEEEeECCCCCCeEEEEEEECCE-EEEeecCCHHHHHHHHHHHHHHHHh
Confidence 3799999999999875 79998764 5799999999999998 9999999999999999999999885
No 14
>2cpn_A TAR RNA-binding protein 2; double-stranded RNA binding domain, DSRBD, DSRM., structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.50.1.1
Probab=99.67 E-value=2.6e-16 Score=140.78 Aligned_cols=74 Identities=20% Similarity=0.298 Sum_probs=65.3
Q ss_pred CccCCCCCCchHHHHHHHHhcCCC-eEEEEeee--cCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHh
Q 002970 603 GRDVSSTETPSGVLQDIAMKCGTK-VEFRPALV--ASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLAN 677 (862)
Q Consensus 603 ~~~~~~~~n~KS~LQE~~QK~~~~-l~Y~~v~~--~~Hdk~Ftv~V~i~G~~~G~G~GkSKKeAEq~AA~~AL~~L~~ 677 (862)
++......+||+.||||||+++.. ++|+++.+ ++|+++|+++|+|+|+ +|+|.|+|||+|||.||+.||+.|..
T Consensus 9 ~~~~~~~~d~Kt~LqE~~Qk~~~~~P~Y~~~~~~Gp~h~~~F~~~v~i~g~-~~~G~G~SKK~Aeq~AA~~AL~~L~~ 85 (89)
T 2cpn_A 9 VSPQQSECNPVGALQELVVQKGWRLPEYTVTQESGPAHRKEFTMTCRVERF-IEIGSGTSKKLAKRNAAAKMLLRVSG 85 (89)
T ss_dssp CCCCCCCCCHHHHHHHHHHHHTCCCCEEEEEEEECCSSSCEEEEEEEETTE-EEEEEESSHHHHHHHHHHHHHHHHHS
T ss_pred ccCCCCCCCHHHHHHHHHHHcCCCCCeEEEEeeECCCCCCeEEEEEEECCE-EEEeeeCCHHHHHHHHHHHHHHHHHh
Confidence 344445679999999999999875 79998764 6799999999999998 99999999999999999999999964
No 15
>3adl_A RISC-loading complex subunit tarbp2; TRBP2, miRNA processing, gene regulation-RNA complex; 2.20A {Homo sapiens}
Probab=99.66 E-value=2.7e-16 Score=140.54 Aligned_cols=69 Identities=19% Similarity=0.294 Sum_probs=62.5
Q ss_pred CCCCchHHHHHHHHhcCCC-eEEEEeee--cCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHh
Q 002970 608 STETPSGVLQDIAMKCGTK-VEFRPALV--ASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLAN 677 (862)
Q Consensus 608 ~~~n~KS~LQE~~QK~~~~-l~Y~~v~~--~~Hdk~Ftv~V~i~G~~~G~G~GkSKKeAEq~AA~~AL~~L~~ 677 (862)
...+|||.||||||+.+.. ++|+++.+ ++|+++|+|+|+|+|+ +|+|.|+|||+|||.||+.||+.|..
T Consensus 13 ~~~d~Ks~LqE~~Q~~~~~~P~Y~~~~~~Gp~H~~~F~~~v~v~g~-~~~G~G~SKK~Aeq~AA~~AL~~L~~ 84 (88)
T 3adl_A 13 RGSHEVGALQELVVQKGWRLPEYTVTQESGPAHRKEFTMTCRVERF-IEIGSGTSKKLAKRNAAAKMLLRVHT 84 (88)
T ss_dssp TTCCHHHHHHHHHHHTTCCCCEEEEEEEESCTTSCEEEEEEEETTE-EEEEEESSHHHHHHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHcCCCCCEEEEEEeECCCCCCeEEEEEEECCE-EEEEeeCCHHHHHHHHHHHHHHHHHc
Confidence 3458999999999999875 79999765 5799999999999998 99999999999999999999999964
No 16
>1x48_A Interferon-induced, double-stranded RNA- activated protein kinase; structure genomics, DSRM domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.50.1.1
Probab=99.66 E-value=2.5e-16 Score=140.63 Aligned_cols=70 Identities=21% Similarity=0.250 Sum_probs=62.8
Q ss_pred CCCchHHHHHHHHhcCCCeEEEEeeecCCCc-eEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHhh
Q 002970 609 TETPSGVLQDIAMKCGTKVEFRPALVASTEL-QFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLANV 678 (862)
Q Consensus 609 ~~n~KS~LQE~~QK~~~~l~Y~~v~~~~Hdk-~Ftv~V~i~G~~~G~G~GkSKKeAEq~AA~~AL~~L~~~ 678 (862)
..+|||.||||||+++..++|+....++|++ +|+|+|+|+|+.+|.|.|+|||+|||.||+.||+.|...
T Consensus 5 ~~d~Kt~LqE~~Q~~~~~~~Y~~~~Gp~H~~~~F~~~v~v~g~~~~~G~G~SKK~Aeq~AA~~AL~~L~~~ 75 (88)
T 1x48_A 5 SSGYIGLVNSFAQKKKLSVNYEQCEPNSELPQRFICKCKIGQTMYGTGSGVTKQEAKQLAAKEAYQKLLKS 75 (88)
T ss_dssp SSCHHHHHHHHHHHTTCCEEEEECCCSSSSSCCEEEEEEESSCEEEEEEESSHHHHHHHHHHHHHHHHHHS
T ss_pred CCCHHHHHHHHHHHcCCCCeeEEeeCCCCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHhc
Confidence 4589999999999999888999322368999 799999999999999999999999999999999999764
No 17
>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}
Probab=99.66 E-value=1.6e-16 Score=159.02 Aligned_cols=117 Identities=17% Similarity=0.097 Sum_probs=90.3
Q ss_pred ceEEEeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC------Cccchh
Q 002970 161 TSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG------SRKSLF 234 (862)
Q Consensus 161 ~~~~vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres~------~~KsL~ 234 (862)
..|++++|||+.+ ||+ .++++|||.|||++.+.||+.|++.|||.+ +|. .++++++. ..|+|+
T Consensus 63 ~~~~v~~RPgv~e---fL~-~l~~~~~i~I~Tss~~~~a~~vl~~ld~~~-~f~------~~l~rd~~~~~k~~~lK~L~ 131 (195)
T 2hhl_A 63 HQVYVLKRPHVDE---FLQ-RMGQLFECVLFTASLAKYADPVADLLDRWG-VFR------ARLFRESCVFHRGNYVKDLS 131 (195)
T ss_dssp EEEEEEECTTHHH---HHH-HHHHHSEEEEECSSCHHHHHHHHHHHCCSS-CEE------EEECGGGCEEETTEEECCGG
T ss_pred eeEEEEeCcCHHH---HHH-HHHcCCeEEEEcCCCHHHHHHHHHHhCCcc-cEE------EEEEcccceecCCceeeeHh
Confidence 3589999999999 787 777889999999999999999999999997 777 44566543 458888
Q ss_pred hhccCCCCCCcEEEEEcCCcccCCCCCCCCeEEecccccccCchhhhccccchHHHHHHHHhhhccc
Q 002970 235 NVFQDGTCHPKMALVIDDRLKVWDDKDQPRVHVVPAFAPYYAPQAEANNAIPVLCVARNIACNVRGG 301 (862)
Q Consensus 235 ~lfp~~~~~~~~vVIIDDR~dVW~~~~~~~v~vV~~Y~pf~~~q~e~~~~~p~L~~a~~vl~~Vh~~ 301 (862)
.+- .+++.+|||||+...|.....| .+.|.+|.. . ..+-.|...+.+|+.++..
T Consensus 132 ~Lg----~~~~~~vivDDs~~~~~~~~~n-gi~i~~~~~--~------~~D~eL~~L~~~L~~l~~~ 185 (195)
T 2hhl_A 132 RLG----RELSKVIIVDNSPASYIFHPEN-AVPVQSWFD--D------MTDTELLDLIPFFEGLSRE 185 (195)
T ss_dssp GSS----SCGGGEEEEESCGGGGTTCGGG-EEECCCCSS--C------TTCCHHHHHHHHHHHHHC-
T ss_pred HhC----CChhHEEEEECCHHHhhhCccC-ccEEeeecC--C------CChHHHHHHHHHHHHHHhC
Confidence 774 5789999999999999987544 445655522 1 1233577788888887643
No 18
>1t4n_A Ribonuclease III; DSRBD, RNA-binding, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.50.1.1
Probab=99.66 E-value=5.5e-17 Score=147.15 Aligned_cols=67 Identities=15% Similarity=0.220 Sum_probs=61.3
Q ss_pred CCchHHHHHHHHhcCCCeEEEEeee-cCCCceEEEEEEECCE-EEEEeecCCHHHHHHHHHHHHHHHHH
Q 002970 610 ETPSGVLQDIAMKCGTKVEFRPALV-ASTELQFSIEAWFAGE-KIGEGIGRTRREAQRQAAEGSIKHLA 676 (862)
Q Consensus 610 ~n~KS~LQE~~QK~~~~l~Y~~v~~-~~Hdk~Ftv~V~i~G~-~~G~G~GkSKKeAEq~AA~~AL~~L~ 676 (862)
.+|||.||||+|+.+..++|+++.+ ++|+++|+|+|+|+|+ .+|.|.|+|||+|||+||+.||+.|.
T Consensus 6 ~D~KT~LQE~~Q~~~~~p~Y~v~~~GpdH~k~F~v~v~i~~~~~~g~G~G~SKK~AEQ~AA~~AL~~l~ 74 (94)
T 1t4n_A 6 MNAKRQLYSLIGYASLRLHYVTVKKPTAVDPNSIVECRVGDGTVLGTGVGRNIKIAGIRAAENALRDKK 74 (94)
T ss_dssp HHHHHHHHHHTCSSSSCCEEEECCCCSSSCCSEEEEEECSSSCEEEEEEESSHHHHHHHHHHHHHHCHH
T ss_pred CCchHHHHHHHcCCCCCCEEEEeeeCCCCCCeEEEEEEECCEEEEEEEEeCCHHHHHHHHHHHHHHHHH
Confidence 3799999999999866689999755 6799999999999999 99999999999999999999998885
No 19
>1uhz_A Staufen (RNA binding protein) homolog 2; DSRM, staufen homolog 2, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.50.1.1
Probab=99.65 E-value=3.6e-16 Score=139.88 Aligned_cols=68 Identities=19% Similarity=0.280 Sum_probs=61.9
Q ss_pred CCCchHHHHHHHHhcCCC-eEEEEeee--cCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHh
Q 002970 609 TETPSGVLQDIAMKCGTK-VEFRPALV--ASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLAN 677 (862)
Q Consensus 609 ~~n~KS~LQE~~QK~~~~-l~Y~~v~~--~~Hdk~Ftv~V~i~G~~~G~G~GkSKKeAEq~AA~~AL~~L~~ 677 (862)
..+|||.||||||+++.. ++|+++.+ ++|++.|+++|+|+|+ +|.|.|+|||+|||.||+.||+.|..
T Consensus 5 ~~d~Kt~LqE~~Q~~~~~~P~Y~~~~~~Gp~H~~~F~~~v~v~g~-~~~G~G~SKK~Aeq~AA~~AL~~L~~ 75 (89)
T 1uhz_A 5 SSGPISRLAQIQQARKEKEPDYILLSERGMPRRREFVMQVKVGNE-VATGTGPNKKIAKKNAAEAMLLQLGY 75 (89)
T ss_dssp SSCHHHHHHHHHHHTTSCCCEEEEEEEESCSTTCEEEEEEEETTE-EEEEEESSHHHHHHHHHHHHHHHHTS
T ss_pred CCCHHHHHHHHHHHhCCCCCeEEEEEeECCCCCCeEEEEEEECCE-EEEEeeCCHHHHHHHHHHHHHHHHhc
Confidence 358999999999999865 79998764 5799999999999996 99999999999999999999999964
No 20
>2khx_A Ribonuclease 3; drosha, RNA binding domain, hydrolase, gene regulation, NUCL protein, gene regulation,nuclear protein; NMR {Homo sapiens}
Probab=99.65 E-value=7.1e-17 Score=143.36 Aligned_cols=70 Identities=20% Similarity=0.335 Sum_probs=61.6
Q ss_pred CCchHHHHHHHHhc-----C-CCeEEEEeee--cCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHhhh
Q 002970 610 ETPSGVLQDIAMKC-----G-TKVEFRPALV--ASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLANVY 679 (862)
Q Consensus 610 ~n~KS~LQE~~QK~-----~-~~l~Y~~v~~--~~Hdk~Ftv~V~i~G~~~G~G~GkSKKeAEq~AA~~AL~~L~~~~ 679 (862)
.+|||.||||||+. + ..++|+++.+ ++|+++|+|+|+|+|+.+|+|.|+|||+|||.||+.||+.|....
T Consensus 1 ~d~Kt~LQE~~Q~~~~~~~~~~~p~Y~~~~~~Gp~H~~~F~v~V~v~g~~~~~G~G~SKK~AEq~AA~~AL~~L~~~~ 78 (85)
T 2khx_A 1 NDPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVYFKGERIGCGKGPSIQQAEMGAAMDALEKYNFPQ 78 (85)
T ss_dssp CCSCHHHHHHHHHCCCSSSCCCCCCEEECCCCCSSSCCCEEEEEEETTEECCCEEESSHHHHHHHHHHHHHTTCCSSC
T ss_pred CCHHHHHHHHHhhhhhhcCCCCCceEEEEEeECCCCCCcEEEEEEECCEEEEEEeeCCHHHHHHHHHHHHHHHHhHhh
Confidence 37999999999984 3 3579999764 679999999999999999999999999999999999999886543
No 21
>1ekz_A DSRBDIII, maternal effect protein (staufen); structure, protein/RNA, protein DSRBD, RNA hairpin; NMR {Drosophila melanogaster} SCOP: d.50.1.1 PDB: 1stu_A
Probab=99.65 E-value=6.7e-17 Score=139.78 Aligned_cols=68 Identities=19% Similarity=0.319 Sum_probs=62.3
Q ss_pred CCCCchHHHHHHHHhcCCCeEEEEeee--cCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHH
Q 002970 608 STETPSGVLQDIAMKCGTKVEFRPALV--ASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLA 676 (862)
Q Consensus 608 ~~~n~KS~LQE~~QK~~~~l~Y~~v~~--~~Hdk~Ftv~V~i~G~~~G~G~GkSKKeAEq~AA~~AL~~L~ 676 (862)
...+|||.||||||+.+..++|+++.+ ++|++.|+++|+|+| .+|+|.|+|||+|||.||+.||+.|.
T Consensus 5 ~~~d~ks~LqE~~q~~~~~p~Y~~~~~~Gp~h~~~F~~~v~i~~-~~~~G~G~sKK~Aeq~AA~~aL~~L~ 74 (76)
T 1ekz_A 5 DKKSPISQVHEIGIKRNMTVHFKVLREEGPAHMKNFITACIVGS-IVTEGEGNGKKVSKKRAAEKMLVELQ 74 (76)
T ss_dssp CCSCHHHHHHHHHHHTTCCCEEEESSSCCSSSCSCSSEEEEETT-EEEEECCCSTTSSSHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHcCCCCEEEEEEeECCCCCCcEEEEEEECC-EEEEEeeCCHHHHHHHHHHHHHHHHh
Confidence 346899999999999987799998754 679999999999999 99999999999999999999999885
No 22
>1x47_A DGCR8 protein; structural genomics, DSRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.50.1.1
Probab=99.65 E-value=7.4e-16 Score=140.13 Aligned_cols=71 Identities=13% Similarity=0.165 Sum_probs=64.2
Q ss_pred CCCCchHHHHHHHHhcCCC-eEEEEeeecCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHhh
Q 002970 608 STETPSGVLQDIAMKCGTK-VEFRPALVASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLANV 678 (862)
Q Consensus 608 ~~~n~KS~LQE~~QK~~~~-l~Y~~v~~~~Hdk~Ftv~V~i~G~~~G~G~GkSKKeAEq~AA~~AL~~L~~~ 678 (862)
...+||+.||||||+++.. ++|+++.+.+.+++|+|+|+|+|+.+|.|.|+|||+|||+||+.||+.|...
T Consensus 14 ~~kd~Kt~LqE~~Q~~~~~~P~Y~~~~~~Gp~~~F~~~V~v~g~~~~~G~G~SKK~Aeq~AA~~AL~~L~~~ 85 (98)
T 1x47_A 14 NGKSEVCILHEYMQRVLKVRPVYNFFECENPSEPFGASVTIDGVTYGSGTASSKKLAKNKAARATLEILIPD 85 (98)
T ss_dssp TCCCHHHHHHHHHHHHTCSCCEEEEEECSSSSCCEEEEEEETTEEEEEEEESSHHHHHHHHHHHHHHHHCSS
T ss_pred CCCCHHHHHHHHHHHcCCCCCeEEEEEeECCCCcEEEEEEECCEEEEEeeeCCHHHHHHHHHHHHHHHHHhh
Confidence 5678999999999999875 7999987665559999999999999999999999999999999999999643
No 23
>2l2n_A Hyponastic leave 1; DSRBD, miRNA, RNA binding protein, plant protein; NMR {Arabidopsis thaliana}
Probab=99.64 E-value=4.5e-16 Score=142.68 Aligned_cols=74 Identities=23% Similarity=0.200 Sum_probs=62.4
Q ss_pred cCCCCCCchHHHHHHHHhcCCC-eEEEEeee-cCCCceEEEEEEECCEEEEEeec-CCHHHHHHHHHHHHHHHHHhh
Q 002970 605 DVSSTETPSGVLQDIAMKCGTK-VEFRPALV-ASTELQFSIEAWFAGEKIGEGIG-RTRREAQRQAAEGSIKHLANV 678 (862)
Q Consensus 605 ~~~~~~n~KS~LQE~~QK~~~~-l~Y~~v~~-~~Hdk~Ftv~V~i~G~~~G~G~G-kSKKeAEq~AA~~AL~~L~~~ 678 (862)
......+|||.||||||+++.. ++|+++.+ ++|+++|+++|+|+|+.+|.|.| +|||+|||.||+.||+.|...
T Consensus 12 ~~~~~~d~Kt~LqE~~Q~~~~~~P~Y~~~~~Gp~H~~~F~~~V~v~g~~~~~G~G~~SKK~Aeq~AA~~AL~~L~~~ 88 (103)
T 2l2n_A 12 GVSNCYVFKSRLQEYAQKYKLPTPVYEIVKEGPSHKSLFQSTVILDGVRYNSLPGFFNRKAAEQSAAEVALRELAKS 88 (103)
T ss_dssp -------CTTHHHHHHHHTTCCCCEEEEEEESCSSSCEEEEEEEETTEEEECCSCBSSHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCHHHHHHHHHHHcCCCCCeEEEEeEcCCCCCeEEEEEEECCEEEEEeecCCCHHHHHHHHHHHHHHHHhcc
Confidence 3445678999999999999875 69999875 67999999999999999999999 999999999999999999753
No 24
>3adj_A F21M12.9 protein; HYL1, miRNA processing, RNA binding protein, gene regulation; 3.00A {Arabidopsis thaliana} PDB: 2l2m_A
Probab=99.63 E-value=2.7e-16 Score=136.22 Aligned_cols=71 Identities=18% Similarity=0.123 Sum_probs=64.0
Q ss_pred CCchHHHHHHhhhcCCCceeeecCCCCCCCCCCccEEEEEEECCEEEeeeecCCHHHHHHHHHHHHHHHhhc
Q 002970 742 MGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRS 813 (862)
Q Consensus 742 ~N~V~lLnELcqkeGL~~~f~~e~v~~sGp~H~keF~aqV~IdGkvyG~GtGsSKKeAKqqAAe~AL~aL~~ 813 (862)
+||++.|||+||+.++..+.|.. +..+||+|.+.|++.|.|+|+.||.|.|+|||+|||+||+.||..|..
T Consensus 4 ~n~Kt~LqE~~q~~~~~~p~Y~~-~~~~Gp~h~~~F~~~v~v~g~~~~~G~G~sKK~Aeq~AA~~al~~L~~ 74 (76)
T 3adj_A 4 GLCKNLLQEYAQKMNYAIPLYQC-QKVETLGRVTQFTCTVEIGGIKYTGAATRTKKDAEISAGRTALLAIQS 74 (76)
T ss_dssp HHHHHHHHHHHHTTTCCCCEEEE-EEEECSSSCEEEEEEEEETTEEEECCCBSSHHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHhCCCCCeEEE-eeccCCCCCCcEEEEEEECCEEEEEeccCCHHHHHHHHHHHHHHHHhh
Confidence 59999999999999998764433 345899999999999999999999999999999999999999999964
No 25
>1whq_A RNA helicase A; double-stranded RNA binding domain, DSRBD, DSRM, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Mus musculus} SCOP: d.50.1.1 PDB: 2rs6_A
Probab=99.63 E-value=7e-16 Score=140.69 Aligned_cols=70 Identities=19% Similarity=0.213 Sum_probs=62.4
Q ss_pred CCCchHHHHHHHHhcCCCeEEEEeee-cCCCceEEEEEEECC-EEEEEeecCCHHHHHHHHHHHHHHHHHhh
Q 002970 609 TETPSGVLQDIAMKCGTKVEFRPALV-ASTELQFSIEAWFAG-EKIGEGIGRTRREAQRQAAEGSIKHLANV 678 (862)
Q Consensus 609 ~~n~KS~LQE~~QK~~~~l~Y~~v~~-~~Hdk~Ftv~V~i~G-~~~G~G~GkSKKeAEq~AA~~AL~~L~~~ 678 (862)
..+|||.||||||++...++|++... ++|+++|+++|+|+| +.+|+|.|+|||+|||+||+.||+.|...
T Consensus 5 ~~d~Kt~LqE~~Qk~~~~P~Y~~~~~Gp~H~~~F~~~V~v~g~~~~~~G~G~SKK~Aeq~AA~~AL~~L~~~ 76 (99)
T 1whq_A 5 SSGIKNFLYAWCGKRKMTPAYEIRAVGNKNRQKFMCEVRVEGFNYAGMGNSTNKKDAQSNAARDFVNYLVRI 76 (99)
T ss_dssp CCSSHHHHHHHHHHTTCCCEEEEEEEECSSSEEEEEEEECTTCSCCEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHCCCCCeEEEeeecCCCCCeEEEEEEECCeEEEEEeccCCHHHHHHHHHHHHHHHHHhh
Confidence 34799999999999955689998322 679999999999999 79999999999999999999999999764
No 26
>2b7t_A Double-stranded RNA-specific editase 1; RNA editing, RNA-binding protein, hydrolase; NMR {Rattus norvegicus} SCOP: d.50.1.1 PDB: 2l3c_A
Probab=99.62 E-value=8.9e-16 Score=131.94 Aligned_cols=66 Identities=18% Similarity=0.277 Sum_probs=59.6
Q ss_pred CCchHHHHHHHHhcCCCeEEEEeee--cCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHh
Q 002970 610 ETPSGVLQDIAMKCGTKVEFRPALV--ASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLAN 677 (862)
Q Consensus 610 ~n~KS~LQE~~QK~~~~l~Y~~v~~--~~Hdk~Ftv~V~i~G~~~G~G~GkSKKeAEq~AA~~AL~~L~~ 677 (862)
.+|||.||||+|+ ...++|+++.+ ++|+++|+++|.|+|+.+ +|.|+|||+|||+||+.||+.|.+
T Consensus 4 ~d~Ks~Lqe~~q~-~~~p~Y~~~~~~Gp~h~~~F~~~v~v~g~~~-~G~G~SKK~Aeq~AA~~al~~L~~ 71 (73)
T 2b7t_A 4 VLPKNALMQLNEI-KPGLQYMLLSQTGPVHAPLFVMSVEVNGQVF-EGSGPTKKKAKLHAAEKALRSFVQ 71 (73)
T ss_dssp SSSHHHHHHHHHH-CSCCEEEEEEEECSSSSCEEEEEEESSSSEE-EEEESSHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHcC-CCCceEEEEEeeCCCCCCeEEEEEEECCEEE-EeecCCHHHHHHHHHHHHHHHHhc
Confidence 4799999999996 55689998764 679999999999999997 999999999999999999999864
No 27
>2cpn_A TAR RNA-binding protein 2; double-stranded RNA binding domain, DSRBD, DSRM., structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.50.1.1
Probab=99.62 E-value=1e-15 Score=136.99 Aligned_cols=76 Identities=20% Similarity=0.204 Sum_probs=66.1
Q ss_pred CcCCCCchHHHHHHhhhcCCCceeeecCCCCCCCCCCccEEEEEEECCEEEeeeecCCHHHHHHHHHHHHHHHhhccc
Q 002970 738 SKKLMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRSMF 815 (862)
Q Consensus 738 ~~~~~N~V~lLnELcqkeGL~~~f~~e~v~~sGp~H~keF~aqV~IdGkvyG~GtGsSKKeAKqqAAe~AL~aL~~~~ 815 (862)
+....|||+.||||||+.++..+.|.. +..+|++|.+.|++.|.|+|+ +|.|+|+|||+|||+||+.||..|.+.+
T Consensus 12 ~~~~~d~Kt~LqE~~Qk~~~~~P~Y~~-~~~~Gp~h~~~F~~~v~i~g~-~~~G~G~SKK~Aeq~AA~~AL~~L~~~s 87 (89)
T 2cpn_A 12 QQSECNPVGALQELVVQKGWRLPEYTV-TQESGPAHRKEFTMTCRVERF-IEIGSGTSKKLAKRNAAAKMLLRVSGPS 87 (89)
T ss_dssp CCCCCCHHHHHHHHHHHHTCCCCEEEE-EEEECCSSSCEEEEEEEETTE-EEEEEESSHHHHHHHHHHHHHHHHHSCC
T ss_pred CCCCCCHHHHHHHHHHHcCCCCCeEEE-EeeECCCCCCeEEEEEEECCE-EEEeeeCCHHHHHHHHHHHHHHHHHhhc
Confidence 334679999999999999998664433 345899999999999999998 9999999999999999999999997544
No 28
>1t4o_A Ribonuclease III; RNT1P, DSRBD, RNA-binding, hydrolase; 2.50A {Saccharomyces cerevisiae} SCOP: d.50.1.1 PDB: 1t4l_B 2lbs_B
Probab=99.61 E-value=5.2e-16 Score=145.65 Aligned_cols=67 Identities=15% Similarity=0.220 Sum_probs=61.4
Q ss_pred CCchHHHHHHHHhcCCCeEEEEeee-cCCCceEEEEEEECCE-EEEEeecCCHHHHHHHHHHHHHHHHH
Q 002970 610 ETPSGVLQDIAMKCGTKVEFRPALV-ASTELQFSIEAWFAGE-KIGEGIGRTRREAQRQAAEGSIKHLA 676 (862)
Q Consensus 610 ~n~KS~LQE~~QK~~~~l~Y~~v~~-~~Hdk~Ftv~V~i~G~-~~G~G~GkSKKeAEq~AA~~AL~~L~ 676 (862)
.+|||.||||+|+.+..+.|+++.+ ++|+++|+|+|+|+|+ .+|.|.|+|||+|||+||+.||..+.
T Consensus 8 ~D~KT~LQE~~Q~~~~~P~Y~vv~~GPdH~k~F~v~V~i~g~~~~g~G~G~SKK~AEQ~AA~~AL~~l~ 76 (117)
T 1t4o_A 8 MNAKRQLYSLIGYASLRLHYVTVKKPTAVDPNSIVECRVGDGTVLGTGVGRNIKIAGIRAAENALRDKK 76 (117)
T ss_dssp TTHHHHHHHHHCCGGGCCEEEEEECCCSSCCCEEEEEECTTCCEEEEEEESSHHHHHHHHHHHHHHCHH
T ss_pred CCchHHHHHHHcCCCCCCEEEEeeeCCCCCCeEEEEEEECCEEEEEEEEeCCHHHHHHHHHHHHHHHHH
Confidence 4899999999999666689998765 6799999999999999 99999999999999999999998875
No 29
>1di2_A XLRBPA, double stranded RNA binding protein A; protein-RNA complex, protein-RNA interactions, RNA-bining protein; 1.90A {Xenopus laevis} SCOP: d.50.1.1
Probab=99.61 E-value=5.6e-16 Score=131.55 Aligned_cols=68 Identities=24% Similarity=0.300 Sum_probs=60.9
Q ss_pred chHHHHHHhhhcCCCceeeecCCCCCCCCCCccEEEEEEECCEEEeeeecCCHHHHHHHHHHHHHHHhhc
Q 002970 744 SVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRS 813 (862)
Q Consensus 744 ~V~lLnELcqkeGL~~~f~~e~v~~sGp~H~keF~aqV~IdGkvyG~GtGsSKKeAKqqAAe~AL~aL~~ 813 (862)
||+.|||+||+.++..+.|.. +..+||+|.+.|++.|.|+|+ +|.|.|+|||+|||.||+.||..|.+
T Consensus 2 p~s~LqE~~q~~~~~~p~Y~~-~~~~Gp~h~~~F~~~v~v~~~-~~~G~G~sKK~Aeq~AA~~al~~L~~ 69 (69)
T 1di2_A 2 PVGSLQELAVQKGWRLPEYTV-AQESGPPHKREFTITCRVETF-VETGSGTSKQVAKRVAAEKLLTKFKT 69 (69)
T ss_dssp HHHHHHHHHHHHTCCCCEEEE-EEEESCGGGCEEEEEEEETTE-EEEEEESSHHHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHcCCCCCEEEE-EEeECCCCCCeEEEEEEECCE-EEEeecCCHHHHHHHHHHHHHHHHhC
Confidence 799999999999998764433 345899999999999999998 99999999999999999999999863
No 30
>2khx_A Ribonuclease 3; drosha, RNA binding domain, hydrolase, gene regulation, NUCL protein, gene regulation,nuclear protein; NMR {Homo sapiens}
Probab=99.60 E-value=7.9e-16 Score=136.66 Aligned_cols=73 Identities=21% Similarity=0.259 Sum_probs=62.8
Q ss_pred CCchHHHHHHhhh-----cCCCceeeecCCCCCCCCCCccEEEEEEECCEEEeeeecCCHHHHHHHHHHHHHHHhhccc
Q 002970 742 MGSVSALKELCMT-----EGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRSMF 815 (862)
Q Consensus 742 ~N~V~lLnELcqk-----eGL~~~f~~e~v~~sGp~H~keF~aqV~IdGkvyG~GtGsSKKeAKqqAAe~AL~aL~~~~ 815 (862)
.||++.|||+||+ .++..+.|.. +.++||+|.+.|++.|.|+|+.||.|+|+|||+|||+||+.||..|....
T Consensus 1 ~d~Kt~LQE~~Q~~~~~~~~~~~p~Y~~-~~~~Gp~H~~~F~v~V~v~g~~~~~G~G~SKK~AEq~AA~~AL~~L~~~~ 78 (85)
T 2khx_A 1 NDPKSQLQQCCLTLRTEGKEPDIPLYKT-LQTVGPSHARTYTVAVYFKGERIGCGKGPSIQQAEMGAAMDALEKYNFPQ 78 (85)
T ss_dssp CCSCHHHHHHHHHCCCSSSCCCCCCEEE-CCCCCSSSCCCEEEEEEETTEECCCEEESSHHHHHHHHHHHHHTTCCSSC
T ss_pred CCHHHHHHHHHhhhhhhcCCCCCceEEE-EEeECCCCCCcEEEEEEECCEEEEEEeeCCHHHHHHHHHHHHHHHHhHhh
Confidence 4899999999997 4565554433 45689999999999999999999999999999999999999999886543
No 31
>3adl_A RISC-loading complex subunit tarbp2; TRBP2, miRNA processing, gene regulation-RNA complex; 2.20A {Homo sapiens}
Probab=99.60 E-value=1.1e-15 Score=136.51 Aligned_cols=74 Identities=20% Similarity=0.217 Sum_probs=64.1
Q ss_pred CCCCchHHHHHHhhhcCCCceeeecCCCCCCCCCCccEEEEEEECCEEEeeeecCCHHHHHHHHHHHHHHHhhccc
Q 002970 740 KLMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRSMF 815 (862)
Q Consensus 740 ~~~N~V~lLnELcqkeGL~~~f~~e~v~~sGp~H~keF~aqV~IdGkvyG~GtGsSKKeAKqqAAe~AL~aL~~~~ 815 (862)
...||++.||||||+.++..+.|.. +..+||+|.+.|++.|.|+|+ +|.|+|+|||+|||+||+.||..|..+.
T Consensus 13 ~~~d~Ks~LqE~~Q~~~~~~P~Y~~-~~~~Gp~H~~~F~~~v~v~g~-~~~G~G~SKK~Aeq~AA~~AL~~L~~~p 86 (88)
T 3adl_A 13 RGSHEVGALQELVVQKGWRLPEYTV-TQESGPAHRKEFTMTCRVERF-IEIGSGTSKKLAKRNAAAKMLLRVHTVP 86 (88)
T ss_dssp TTCCHHHHHHHHHHHTTCCCCEEEE-EEEESCTTSCEEEEEEEETTE-EEEEEESSHHHHHHHHHHHHHHHHHC--
T ss_pred CCCCHHHHHHHHHHHcCCCCCEEEE-EEeECCCCCCeEEEEEEECCE-EEEEeeCCHHHHHHHHHHHHHHHHHccC
Confidence 3469999999999999998764433 345899999999999999998 9999999999999999999999997543
No 32
>3adg_A F21M12.9 protein; HYL1, miRNA processing mechanism, RNA binding protein, gene regulation; 1.70A {Arabidopsis thaliana} PDB: 3adi_A
Probab=99.60 E-value=1.2e-15 Score=131.05 Aligned_cols=69 Identities=23% Similarity=0.110 Sum_probs=62.4
Q ss_pred CCchHHHHHHhhhcCCCceeeecCCCCCCCCCCccEEEEEEECCEEEeeeec-CCHHHHHHHHHHHHHHHhh
Q 002970 742 MGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIG-STWDEAKMQAAEKALGSLR 812 (862)
Q Consensus 742 ~N~V~lLnELcqkeGL~~~f~~e~v~~sGp~H~keF~aqV~IdGkvyG~GtG-sSKKeAKqqAAe~AL~aL~ 812 (862)
.||++.|||+||+.++..+.|.. +. .||+|.+.|++.|.|+|+.||.|.| +|||+|||+||+.||..|.
T Consensus 3 ~d~Kt~LqE~~q~~~~~~p~Y~~-~~-~Gp~h~~~F~~~v~v~g~~~~~G~G~~sKK~Aeq~AA~~al~~L~ 72 (73)
T 3adg_A 3 HVFKSRLQEYAQKYKLPTPVYEI-VK-EGPSHKSLFQSTVILDGVRYNSLPGFFNRKAAEQSAAEVALRELA 72 (73)
T ss_dssp CSHHHHHHHHHHHTTCCCCEEEE-EE-ESSTTSCEEEEEEEETTEEEECCSCBSSHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHcCCCCCEEEE-Ee-ECCCCCCeEEEEEEECCEEEEeeeccCCHHHHHHHHHHHHHHHhh
Confidence 59999999999999998775543 33 5999999999999999999999999 9999999999999999884
No 33
>2dmy_A Spermatid perinuclear RNA-binding protein; DSRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.50.1.1
Probab=99.59 E-value=3.2e-15 Score=135.61 Aligned_cols=67 Identities=10% Similarity=0.141 Sum_probs=60.9
Q ss_pred CCCCchHHHHHHHHhcCCCeEEEEeee--cCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHH
Q 002970 608 STETPSGVLQDIAMKCGTKVEFRPALV--ASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLA 676 (862)
Q Consensus 608 ~~~n~KS~LQE~~QK~~~~l~Y~~v~~--~~Hdk~Ftv~V~i~G~~~G~G~GkSKKeAEq~AA~~AL~~L~ 676 (862)
...+|||.||||+|+. ..++|+++.+ ++|+++|+++|+|+|+.+ +|.|+|||+|||+||+.||+.|.
T Consensus 14 ~~~d~Kt~LqE~~Q~~-~~p~Y~~~~~~Gp~H~~~F~~~v~v~g~~~-~G~G~SKK~Aeq~AA~~aL~~L~ 82 (97)
T 2dmy_A 14 KAIDLMNALMRLNQIR-PGLQYKLLSQSGPVHAPVFTMSVDVDGTTY-EASGPSKKTAKLHVAVKVLQAMG 82 (97)
T ss_dssp CSSSCTHHHHHHHHHS-CSCCCEEEEEESCSSSCEEEEEEEETTEEE-EEEESSHHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHhcC-CCceEEEEEeeCCCCCCeEEEEEEECCEEE-EEeeCCHHHHHHHHHHHHHHHhC
Confidence 3468999999999996 5689999864 679999999999999998 99999999999999999999994
No 34
>1whn_A Hypothetical protein riken cDNA 2310016K04; double-stranded RNA binding domain, DSRBD, DSRM, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.50.1.1
Probab=99.58 E-value=2.2e-15 Score=143.38 Aligned_cols=68 Identities=13% Similarity=0.102 Sum_probs=63.5
Q ss_pred CCCCchHHHHHHHHhcCCC-eEEEEeeecCCCceEEEEEEECCEEEEEeec-CCHHHHHHHHHHHHHHHHH
Q 002970 608 STETPSGVLQDIAMKCGTK-VEFRPALVASTELQFSIEAWFAGEKIGEGIG-RTRREAQRQAAEGSIKHLA 676 (862)
Q Consensus 608 ~~~n~KS~LQE~~QK~~~~-l~Y~~v~~~~Hdk~Ftv~V~i~G~~~G~G~G-kSKKeAEq~AA~~AL~~L~ 676 (862)
...+|||.||||||+++.. ++|+++.+ +|+++|+++|+|+|+.||.|.| +|||+|||+||+.||+.|.
T Consensus 24 ~~~d~Kt~LQE~~Qk~~~~~P~Y~~v~~-~H~~~F~v~V~v~g~~~g~G~G~~SKK~AEQ~AA~~AL~~L~ 93 (128)
T 1whn_A 24 PQITPKMCLLEWCRREKLPQPVYETVQR-TIDRMFCSVVTVAEQKYQSTLWDKSKKLAEQTAAIVCLRSQG 93 (128)
T ss_dssp TTCCHHHHHHHHHHHTTCCCCCCCEEEC-SSSCCEEEEEEETTEEEEESSCBSSHHHHHHHHHHHHHHHHT
T ss_pred cCCCHHHHHHHHHHHcCCCCCeEEEEee-cCCCcEEEEEEECCEEEEEEeccCCHHHHHHHHHHHHHHHHh
Confidence 4568999999999999865 69999877 9999999999999999999999 9999999999999999995
No 35
>1x48_A Interferon-induced, double-stranded RNA- activated protein kinase; structure genomics, DSRM domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.50.1.1
Probab=99.58 E-value=5.7e-15 Score=131.83 Aligned_cols=70 Identities=23% Similarity=0.295 Sum_probs=63.9
Q ss_pred CCCchHHHHHHhhhcCCCceeeecCCCCCCCCCCc-cEEEEEEECCEEEeeeecCCHHHHHHHHHHHHHHHhhcc
Q 002970 741 LMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKD-EVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRSM 814 (862)
Q Consensus 741 ~~N~V~lLnELcqkeGL~~~f~~e~v~~sGp~H~k-eF~aqV~IdGkvyG~GtGsSKKeAKqqAAe~AL~aL~~~ 814 (862)
..|||+.||||||+.++...|. . .+||+|.+ .|++.|.|+|+.||.|.|+|||+|||+||+.||..|...
T Consensus 5 ~~d~Kt~LqE~~Q~~~~~~~Y~-~---~~Gp~H~~~~F~~~v~v~g~~~~~G~G~SKK~Aeq~AA~~AL~~L~~~ 75 (88)
T 1x48_A 5 SSGYIGLVNSFAQKKKLSVNYE-Q---CEPNSELPQRFICKCKIGQTMYGTGSGVTKQEAKQLAAKEAYQKLLKS 75 (88)
T ss_dssp SSCHHHHHHHHHHHTTCCEEEE-E---CCCSSSSSCCEEEEEEESSCEEEEEEESSHHHHHHHHHHHHHHHHHHS
T ss_pred CCCHHHHHHHHHHHcCCCCeeE-E---eeCCCCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHhc
Confidence 3599999999999999988665 3 48999999 699999999999999999999999999999999999764
No 36
>2l33_A Interleukin enhancer-binding factor 3; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, DRBM; NMR {Homo sapiens}
Probab=99.58 E-value=5.3e-15 Score=133.31 Aligned_cols=70 Identities=19% Similarity=0.247 Sum_probs=62.8
Q ss_pred CCCCCchHHHHHHHHhcCCCeEEEEeee--cCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHhh
Q 002970 607 SSTETPSGVLQDIAMKCGTKVEFRPALV--ASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLANV 678 (862)
Q Consensus 607 ~~~~n~KS~LQE~~QK~~~~l~Y~~v~~--~~Hdk~Ftv~V~i~G~~~G~G~GkSKKeAEq~AA~~AL~~L~~~ 678 (862)
+...++|+.||||+|+++ .++|+++.+ ++|+++|+|+|+|+|+.+ .|+|+|||+|||+||+.||+.|...
T Consensus 11 ~~~~~~K~~LqEl~Qk~~-~p~Y~~v~~~Gp~H~~~F~v~V~v~g~~~-~G~G~SKK~AEq~AA~~AL~~L~~~ 82 (91)
T 2l33_A 11 MLTKHGKNPVMELNEKRR-GLKYELISETGGSHDKRFVMEVEVDGQKF-QGAGSNKKVAKAYAALAALEKLFPD 82 (91)
T ss_dssp CCCSSTTCHHHHHHHHCS-SCEEEEEEEEECSSCEEEEEEEEETTEEE-EEEESSHHHHHHHHHHHHHHHHCCC
T ss_pred hhccCCCCHHHHHHHhCC-CCeEEEEEeeCCCCCCeEEEEEEECCEEE-EeeeCCHHHHHHHHHHHHHHHHhhc
Confidence 345579999999999998 889998764 689999999999999997 9999999999999999999999643
No 37
>1x49_A Interferon-induced, double-stranded RNA- activated protein kinase; structure genomics, DSRM domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.50.1.1
Probab=99.58 E-value=1.4e-15 Score=138.11 Aligned_cols=74 Identities=19% Similarity=0.179 Sum_probs=65.7
Q ss_pred CCCCchHHHHHHhhhcCCCceeeecCCCCCCCCCCccEEEEEEECCEEEeeeecCCHHHHHHHHHHHHHHHhhccc
Q 002970 740 KLMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRSMF 815 (862)
Q Consensus 740 ~~~N~V~lLnELcqkeGL~~~f~~e~v~~sGp~H~keF~aqV~IdGkvyG~GtGsSKKeAKqqAAe~AL~aL~~~~ 815 (862)
...|||+.||||||+.++...|.. +..+||+|.+.|++.|.|+|+.||.|.|+|||+|||+||+.||..|....
T Consensus 12 ~~~n~Kt~LqE~~Q~~~~~p~Y~~--~~~~Gp~H~~~F~v~v~i~g~~~~~G~G~SKK~Aeq~AA~~AL~~L~~~~ 85 (97)
T 1x49_A 12 TPGFYMDKLNKYRQMHGVAITYKE--LSTSGPPHDRRFTFQVLIDEKEFPEAKGRSKQEARNAAAKLAVDILDNEN 85 (97)
T ss_dssp CTTHHHHHHHHHHHHHTCCEEEEE--EEEESCSSSCEEEEEEEESSCCCCCEEESSHHHHHHHHHHHHHHHHTTTC
T ss_pred CCCCHHHHHHHHHHHcCCCCeEEE--EEeeCCCCCCcEEEEEEECCEEEEEEeeCCHHHHHHHHHHHHHHHHHhhc
Confidence 457999999999999999865543 34589999999999999999999999999999999999999999997544
No 38
>1ekz_A DSRBDIII, maternal effect protein (staufen); structure, protein/RNA, protein DSRBD, RNA hairpin; NMR {Drosophila melanogaster} SCOP: d.50.1.1 PDB: 1stu_A
Probab=99.58 E-value=9e-16 Score=132.71 Aligned_cols=70 Identities=17% Similarity=0.229 Sum_probs=62.9
Q ss_pred CCCchHHHHHHhhhcCCCceeeecCCCCCCCCCCccEEEEEEECCEEEeeeecCCHHHHHHHHHHHHHHHhhc
Q 002970 741 LMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRS 813 (862)
Q Consensus 741 ~~N~V~lLnELcqkeGL~~~f~~e~v~~sGp~H~keF~aqV~IdGkvyG~GtGsSKKeAKqqAAe~AL~aL~~ 813 (862)
..||++.|||+||+.++. +.|.. +..+||+|.+.|++.|.|+| .+|.|.|+|||+|||.||+.||..|..
T Consensus 6 ~~d~ks~LqE~~q~~~~~-p~Y~~-~~~~Gp~h~~~F~~~v~i~~-~~~~G~G~sKK~Aeq~AA~~aL~~L~~ 75 (76)
T 1ekz_A 6 KKSPISQVHEIGIKRNMT-VHFKV-LREEGPAHMKNFITACIVGS-IVTEGEGNGKKVSKKRAAEKMLVELQK 75 (76)
T ss_dssp CSCHHHHHHHHHHHTTCC-CEEEE-SSSCCSSSCSCSSEEEEETT-EEEEECCCSTTSSSHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHcCCC-CEEEE-EEeECCCCCCcEEEEEEECC-EEEEEeeCCHHHHHHHHHHHHHHHHhh
Confidence 459999999999999999 54433 45689999999999999999 899999999999999999999999864
No 39
>1uil_A Double-stranded RNA-binding motif; structural genomics, DSRM, riken structural genomics/proteomics initiative, RSGI RNA binding protein; NMR {Mus musculus} SCOP: d.50.1.1 PDB: 2rs7_A
Probab=99.58 E-value=3.9e-15 Score=138.72 Aligned_cols=70 Identities=16% Similarity=0.170 Sum_probs=62.7
Q ss_pred CCCchHHHHHHHHhcCCCeEEEEeee-cCCCceEEEEEEE-----CCEEEEEeecCCHHHHHHHHHHHHHHHHHhh
Q 002970 609 TETPSGVLQDIAMKCGTKVEFRPALV-ASTELQFSIEAWF-----AGEKIGEGIGRTRREAQRQAAEGSIKHLANV 678 (862)
Q Consensus 609 ~~n~KS~LQE~~QK~~~~l~Y~~v~~-~~Hdk~Ftv~V~i-----~G~~~G~G~GkSKKeAEq~AA~~AL~~L~~~ 678 (862)
..+||+.||||||+++..++|++... ++|+++|+++|+| +|+.+|.|.|+|||+|||.||+.||+.|...
T Consensus 25 ~~d~Kt~LqE~~Qk~~~~p~Y~~~~~Gp~H~~~F~~~V~v~~~~~~~~~~~~G~G~SKK~AEq~AA~~AL~~L~~~ 100 (113)
T 1uil_A 25 LENAKARLNQYFQKEKIQGEYKYTQVGPDHNRSFIAEMTIYIKQLGRRIFAREHGSNKKLAAQSCALSLVRQLYHL 100 (113)
T ss_dssp HHHHHHHHHHHHHHSCCCCCCEEEEESCSTTCEEEEEEEEEETTTTEEEEEECCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHCCCCCeEEEeeECCCCCCcEEEEEEEeeeccCCEEEEEEeeCCHHHHHHHHHHHHHHHHHhc
Confidence 45899999999999988789994322 6899999999999 6899999999999999999999999999764
No 40
>1uhz_A Staufen (RNA binding protein) homolog 2; DSRM, staufen homolog 2, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.50.1.1
Probab=99.58 E-value=2.5e-15 Score=134.48 Aligned_cols=70 Identities=23% Similarity=0.173 Sum_probs=62.5
Q ss_pred CCCchHHHHHHhhhcCCCceeeecCCCCCCCCCCccEEEEEEECCEEEeeeecCCHHHHHHHHHHHHHHHhh
Q 002970 741 LMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLR 812 (862)
Q Consensus 741 ~~N~V~lLnELcqkeGL~~~f~~e~v~~sGp~H~keF~aqV~IdGkvyG~GtGsSKKeAKqqAAe~AL~aL~ 812 (862)
..|||+.||||||+.++..+.|.. +..+|++|.+.|++.|.|+|+ +|.|.|+|||+|||+||+.||..|.
T Consensus 5 ~~d~Kt~LqE~~Q~~~~~~P~Y~~-~~~~Gp~H~~~F~~~v~v~g~-~~~G~G~SKK~Aeq~AA~~AL~~L~ 74 (89)
T 1uhz_A 5 SSGPISRLAQIQQARKEKEPDYIL-LSERGMPRRREFVMQVKVGNE-VATGTGPNKKIAKKNAAEAMLLQLG 74 (89)
T ss_dssp SSCHHHHHHHHHHHTTSCCCEEEE-EEEESCSTTCEEEEEEEETTE-EEEEEESSHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHhCCCCCeEEE-EEeECCCCCCeEEEEEEECCE-EEEEeeCCHHHHHHHHHHHHHHHHh
Confidence 469999999999999998664433 345899999999999999997 9999999999999999999999995
No 41
>2dix_A Interferon-inducible double stranded RNA- dependent protein kinase activator A; structure genomics, DSRM domain, hypothetical protein PRKRA; NMR {Homo sapiens} SCOP: d.50.1.1
Probab=99.56 E-value=3.5e-15 Score=131.95 Aligned_cols=72 Identities=21% Similarity=0.179 Sum_probs=62.6
Q ss_pred CCCchHHHHHHhhhcCCCceeeecCCCCCCCCCCccEEEEEEECCEEEeeeecCCHHHHHHHHHHHHHHHhhccc
Q 002970 741 LMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRSMF 815 (862)
Q Consensus 741 ~~N~V~lLnELcqkeGL~~~f~~e~v~~sGp~H~keF~aqV~IdGkvyG~GtGsSKKeAKqqAAe~AL~aL~~~~ 815 (862)
..|||+.||||||+.+....|.. +..+||+|.+.|++.|.|+| .+|.|.|+|||+|||+||+.||..|....
T Consensus 7 ~~d~Ks~LqE~~q~~~~~p~Y~~--~~~~Gp~h~~~F~~~v~v~~-~~~~G~G~SKK~Aeq~AA~~aL~~L~~~~ 78 (84)
T 2dix_A 7 GKTPIQVLHEYGMKTKNIPVYEC--ERSDVQIHVPTFTFRVTVGD-ITCTGEGTSKKLAKHRAAEAAINILKANA 78 (84)
T ss_dssp CCCHHHHHHHHHHHTTCCCEEEE--EEEECSSSSCEEEEEEEETT-EEEEECSSCTTHHHHHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHcCCCCeEEE--EEeECCCCCCeEEEEEEECC-EEEEeeeCCHHHHHHHHHHHHHHHHhccc
Confidence 46999999999999985333443 34589999999999999999 89999999999999999999999997544
No 42
>2ljh_A Double-stranded RNA-specific editase ADAR; DSRBD, DSRBM, editing, hydrolase; NMR {Drosophila melanogaster}
Probab=99.55 E-value=8.3e-15 Score=137.03 Aligned_cols=65 Identities=17% Similarity=0.304 Sum_probs=59.3
Q ss_pred CCCCchHHHHHHHHhcCCCeEEEEeee--cCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHh
Q 002970 608 STETPSGVLQDIAMKCGTKVEFRPALV--ASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLAN 677 (862)
Q Consensus 608 ~~~n~KS~LQE~~QK~~~~l~Y~~v~~--~~Hdk~Ftv~V~i~G~~~G~G~GkSKKeAEq~AA~~AL~~L~~ 677 (862)
...+|||.||||||+ ++|+++.+ ++|+++|+++|+|+|+.+ +|.|+|||+|||+||+.||+.|..
T Consensus 35 ~~kd~Ks~LQE~~q~----p~Y~~v~~~Gp~H~k~F~v~V~v~g~~~-~G~G~SKK~AEq~AA~~AL~~L~~ 101 (114)
T 2ljh_A 35 QPKNTVAMLNELRHG----LIYKLESQTGPVHAPLFTISVEVDGQKY-LGQGRSKKVARIEAAATALRSFIQ 101 (114)
T ss_dssp CCSCHHHHHHHHCSC----CEEEEEEEECCSSSCEEEEEEEETTEEE-EEEESSHHHHHHHHHHHHHHHHCC
T ss_pred CCCCHHHHHHHHccC----CeEEEEEeeCCCCCCeEEEEEEECCEEE-EeeeCCHHHHHHHHHHHHHHHHHc
Confidence 456899999999985 89998765 579999999999999999 999999999999999999999964
No 43
>2l2n_A Hyponastic leave 1; DSRBD, miRNA, RNA binding protein, plant protein; NMR {Arabidopsis thaliana}
Probab=99.54 E-value=7.7e-15 Score=134.52 Aligned_cols=73 Identities=22% Similarity=0.100 Sum_probs=62.4
Q ss_pred CCCCchHHHHHHhhhcCCCceeeecCCCCCCCCCCccEEEEEEECCEEEeeeec-CCHHHHHHHHHHHHHHHhhcc
Q 002970 740 KLMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIG-STWDEAKMQAAEKALGSLRSM 814 (862)
Q Consensus 740 ~~~N~V~lLnELcqkeGL~~~f~~e~v~~sGp~H~keF~aqV~IdGkvyG~GtG-sSKKeAKqqAAe~AL~aL~~~ 814 (862)
...||++.|||+||+.++..+.|.. +. .||+|.+.|++.|.|+|+.||.|.| +|||+|||+||+.||..|...
T Consensus 15 ~~~d~Kt~LqE~~Q~~~~~~P~Y~~-~~-~Gp~H~~~F~~~V~v~g~~~~~G~G~~SKK~Aeq~AA~~AL~~L~~~ 88 (103)
T 2l2n_A 15 NCYVFKSRLQEYAQKYKLPTPVYEI-VK-EGPSHKSLFQSTVILDGVRYNSLPGFFNRKAAEQSAAEVALRELAKS 88 (103)
T ss_dssp ----CTTHHHHHHHHTTCCCCEEEE-EE-ESCSSSCEEEEEEEETTEEEECCSCBSSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHcCCCCCeEEE-Ee-EcCCCCCeEEEEEEECCEEEEEeecCCCHHHHHHHHHHHHHHHHhcc
Confidence 3459999999999999998775543 33 5999999999999999999999999 999999999999999999743
No 44
>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}
Probab=99.53 E-value=5.4e-15 Score=158.98 Aligned_cols=120 Identities=15% Similarity=0.177 Sum_probs=89.7
Q ss_pred EEeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCc-cccccccCeEE-------ec---cCC--Cc
Q 002970 164 LVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNL-INTKELLDRIV-------CV---KSG--SR 230 (862)
Q Consensus 164 ~vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~l-Fg~~~l~~RIi-------sr---es~--~~ 230 (862)
++.+|||+++ ||+ .++++|||+|||++.+.||..|++.|||.+.+ |. .|++ +. +.| ..
T Consensus 162 ~~~~RP~l~e---FL~-~l~~~yeivIfTas~~~ya~~vld~Ld~~~~~~~~-----~~~~r~~~~~~~~~~~~~g~~~v 232 (320)
T 3shq_A 162 TELMRPYLHE---FLT-SAYEDYDIVIWSATSMRWIEEKMRLLGVASNDNYK-----VMFYLDSTAMISVHVPERGVVDV 232 (320)
T ss_dssp HHHBCTTHHH---HHH-HHHHHEEEEEECSSCHHHHHHHHHHTTCTTCSSCC-----CCEEECGGGCEEEEETTTEEEEE
T ss_pred ceEeCCCHHH---HHH-HHHhCCEEEEEcCCcHHHHHHHHHHhCCCCCccee-----EEEEEcCCccccccccCCCCEEE
Confidence 4678999999 998 88999999999999999999999999999886 65 3333 11 223 47
Q ss_pred cchhhh---ccCCCCCCcEEEEEcCCcccCCCCCCCCeEEecccccccCchhhhccccchHHHHHHHHhhhc
Q 002970 231 KSLFNV---FQDGTCHPKMALVIDDRLKVWDDKDQPRVHVVPAFAPYYAPQAEANNAIPVLCVARNIACNVR 299 (862)
Q Consensus 231 KsL~~l---fp~~~~~~~~vVIIDDR~dVW~~~~~~~v~vV~~Y~pf~~~q~e~~~~~p~L~~a~~vl~~Vh 299 (862)
|+|+.| ||+ .+.+.+|||||+...|..+.+ |.+.|++|..-. .+ ...+..|.....+|..++
T Consensus 233 KdLs~Lw~~~p~--rdl~~tIiIDdsp~~~~~~p~-NgI~I~~~~~~~--~~--~~~D~eL~~L~~~L~~L~ 297 (320)
T 3shq_A 233 KPLGVIWALYKQ--YNSSNTIMFDDIRRNFLMNPK-SGLKIRPFRQAH--LN--RGTDTELLKLSDYLRKIA 297 (320)
T ss_dssp CCHHHHHHHCTT--CCGGGEEEEESCGGGGTTSGG-GEEECCCCCCHH--HH--TTTCCHHHHHHHHHHHHH
T ss_pred EEhHHhhcccCC--CChhHEEEEeCChHHhccCcC-ceEEeCeEcCCC--CC--CCccHHHHHHHHHHHHHh
Confidence 999999 553 578999999999999998854 556677773211 11 112335767777777665
No 45
>3llh_A RISC-loading complex subunit tarbp2; DSRBD, DSRM, microrna, RNA binding protein; 2.14A {Homo sapiens}
Probab=99.53 E-value=8.9e-15 Score=130.85 Aligned_cols=72 Identities=22% Similarity=0.205 Sum_probs=56.5
Q ss_pred CCCCchHHHHHHhhhcCCCceeeecCCCCCCCCCCccEEEEEEECCEEEeeeecCCHHHHHHHHHHHHHHHhhcc
Q 002970 740 KLMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRSM 814 (862)
Q Consensus 740 ~~~N~V~lLnELcqkeGL~~~f~~e~v~~sGp~H~keF~aqV~IdGkvyG~GtGsSKKeAKqqAAe~AL~aL~~~ 814 (862)
...|||+.|||+||+.+....|.. +..+|++|.+.|++.|.|+|+ +|.|+|+|||+|||+||+.||..|...
T Consensus 12 ~~kd~Ks~LqE~~q~~~~~p~Y~~--~~~~Gp~H~~~F~~~v~v~g~-~~~G~G~SKK~Aeq~AA~~aL~~L~~~ 83 (90)
T 3llh_A 12 PGKTPISLLQEYGTRIGKTPVYDL--LKAEGQAHQPNFTFRVTVGDT-SCTGQGPSKKAAKHKAAEVALKHLKGG 83 (90)
T ss_dssp -CCCHHHHHHHHHHHTTCCCEEEE--EEEC-----CCEEEEEEETTE-EEEEEESSHHHHHHHHHHHHHHHHC--
T ss_pred cCCCHHHHHHHHHHhcCCCCEEEE--EEeECCCCCCcEEEEEEECCE-EEEEEeCCHHHHHHHHHHHHHHHHHhc
Confidence 457999999999999987544543 346899999999999999998 689999999999999999999999754
No 46
>1whq_A RNA helicase A; double-stranded RNA binding domain, DSRBD, DSRM, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Mus musculus} SCOP: d.50.1.1 PDB: 2rs6_A
Probab=99.52 E-value=1.3e-14 Score=132.33 Aligned_cols=82 Identities=13% Similarity=0.106 Sum_probs=67.5
Q ss_pred CCCchHHHHHHhhhcCCCceeeecCCCCCCCCCCccEEEEEEECC-EEEeeeecCCHHHHHHHHHHHHHHHhhccc---C
Q 002970 741 LMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDG-QVLGKGIGSTWDEAKMQAAEKALGSLRSMF---G 816 (862)
Q Consensus 741 ~~N~V~lLnELcqkeGL~~~f~~e~v~~sGp~H~keF~aqV~IdG-kvyG~GtGsSKKeAKqqAAe~AL~aL~~~~---~ 816 (862)
..|||+.||||||+. +..+.|.. ..+|++|.+.|++.|.|+| +.+|.|.|+|||+|||+||+.||..|.... .
T Consensus 5 ~~d~Kt~LqE~~Qk~-~~~P~Y~~--~~~Gp~H~~~F~~~V~v~g~~~~~~G~G~SKK~Aeq~AA~~AL~~L~~~~~~~~ 81 (99)
T 1whq_A 5 SSGIKNFLYAWCGKR-KMTPAYEI--RAVGNKNRQKFMCEVRVEGFNYAGMGNSTNKKDAQSNAARDFVNYLVRINEVKS 81 (99)
T ss_dssp CCSSHHHHHHHHHHT-TCCCEEEE--EEEECSSSEEEEEEEECTTCSCCEEEEESSHHHHHHHHHHHHHHHHHHHTSSCT
T ss_pred CCCHHHHHHHHHHHC-CCCCeEEE--eeecCCCCCeEEEEEEECCeEEEEEeccCCHHHHHHHHHHHHHHHHHhhCCCCc
Confidence 359999999999999 55553432 3589999999999999999 799999999999999999999999997532 3
Q ss_pred CCCCccCCC
Q 002970 817 QFPQKHQGS 825 (862)
Q Consensus 817 ~~~pkrq~s 825 (862)
...|.|+.+
T Consensus 82 ~~~P~~~~~ 90 (99)
T 1whq_A 82 EEVPAVGIV 90 (99)
T ss_dssp TTSCCCCCC
T ss_pred ccCCCcCcC
Confidence 455666644
No 47
>2b7v_A Double-stranded RNA-specific editase 1; RNA editing, RNA-binding protein, hydrolase; NMR {Rattus norvegicus} SCOP: d.50.1.1 PDB: 2l2k_B
Probab=99.52 E-value=3.2e-14 Score=121.52 Aligned_cols=66 Identities=21% Similarity=0.359 Sum_probs=58.4
Q ss_pred CCCCchHHHHHHHHhcCCCeEEEEeee--cCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHhh
Q 002970 608 STETPSGVLQDIAMKCGTKVEFRPALV--ASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLANV 678 (862)
Q Consensus 608 ~~~n~KS~LQE~~QK~~~~l~Y~~v~~--~~Hdk~Ftv~V~i~G~~~G~G~GkSKKeAEq~AA~~AL~~L~~~ 678 (862)
..+|||+.|||| ...++|+++.+ ++|+++|+++|+|+|+.+ +|.|+|||+|||.||+.||+.|...
T Consensus 2 ~~knp~s~L~E~----~~~p~Y~~~~~~Gp~h~~~F~~~v~v~~~~~-~G~G~SKK~Aeq~AA~~al~~L~~~ 69 (71)
T 2b7v_A 2 SGKNPVMILNEL----RPGLKYDFLSESGESHAKSFVMSVVVDGQFF-EGSGRNKKLAKARAAQSALATVFNL 69 (71)
T ss_dssp CSSCHHHHHHHH----CCSCEEEEEECCCCTTTCCEEEEEECSSCEE-EEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHh----CCCCEEEEEEeECCCCCceEEEEEEECCEEE-EEeeCCHHHHHHHHHHHHHHHHHhc
Confidence 357899999999 25679998765 579999999999999976 9999999999999999999999764
No 48
>2b7t_A Double-stranded RNA-specific editase 1; RNA editing, RNA-binding protein, hydrolase; NMR {Rattus norvegicus} SCOP: d.50.1.1 PDB: 2l3c_A
Probab=99.49 E-value=2.1e-14 Score=123.39 Aligned_cols=69 Identities=32% Similarity=0.287 Sum_probs=58.7
Q ss_pred CCCchHHHHHHhhhcCCCceeeecCCCCCCCCCCccEEEEEEECCEEEeeeecCCHHHHHHHHHHHHHHHhhc
Q 002970 741 LMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRS 813 (862)
Q Consensus 741 ~~N~V~lLnELcqkeGL~~~f~~e~v~~sGp~H~keF~aqV~IdGkvyG~GtGsSKKeAKqqAAe~AL~aL~~ 813 (862)
..||++.||||||. +..+.|.. +..+||+|++.|++.|.|+|+.| .|+|+|||+|||+||+.||..|..
T Consensus 3 ~~d~Ks~Lqe~~q~--~~~p~Y~~-~~~~Gp~h~~~F~~~v~v~g~~~-~G~G~SKK~Aeq~AA~~al~~L~~ 71 (73)
T 2b7t_A 3 PVLPKNALMQLNEI--KPGLQYML-LSQTGPVHAPLFVMSVEVNGQVF-EGSGPTKKKAKLHAAEKALRSFVQ 71 (73)
T ss_dssp SSSSHHHHHHHHHH--CSCCEEEE-EEEECSSSSCEEEEEEESSSSEE-EEEESSHHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHcC--CCCceEEE-EEeeCCCCCCeEEEEEEECCEEE-EeecCCHHHHHHHHHHHHHHHHhc
Confidence 45999999999995 43333322 34589999999999999999998 999999999999999999999964
No 49
>1x47_A DGCR8 protein; structural genomics, DSRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.50.1.1
Probab=99.49 E-value=5e-14 Score=128.12 Aligned_cols=73 Identities=26% Similarity=0.148 Sum_probs=63.3
Q ss_pred CCCCchHHHHHHhhhcCCCceeeecCCCCCCCCCCccEEEEEEECCEEEeeeecCCHHHHHHHHHHHHHHHhhccc
Q 002970 740 KLMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRSMF 815 (862)
Q Consensus 740 ~~~N~V~lLnELcqkeGL~~~f~~e~v~~sGp~H~keF~aqV~IdGkvyG~GtGsSKKeAKqqAAe~AL~aL~~~~ 815 (862)
...||++.||||||+.++..+.|.. +..+|++ +.|++.|.|+|+.||.|.|+|||+|||+||+.||..|....
T Consensus 14 ~~kd~Kt~LqE~~Q~~~~~~P~Y~~-~~~~Gp~--~~F~~~V~v~g~~~~~G~G~SKK~Aeq~AA~~AL~~L~~~~ 86 (98)
T 1x47_A 14 NGKSEVCILHEYMQRVLKVRPVYNF-FECENPS--EPFGASVTIDGVTYGSGTASSKKLAKNKAARATLEILIPDF 86 (98)
T ss_dssp TCCCHHHHHHHHHHHHTCSCCEEEE-EECSSSS--CCEEEEEEETTEEEEEEEESSHHHHHHHHHHHHHHHHCSSS
T ss_pred CCCCHHHHHHHHHHHcCCCCCeEEE-EEeECCC--CcEEEEEEECCEEEEEeeeCCHHHHHHHHHHHHHHHHHhhh
Confidence 3469999999999999998764433 3457887 89999999999999999999999999999999999997544
No 50
>2b7v_A Double-stranded RNA-specific editase 1; RNA editing, RNA-binding protein, hydrolase; NMR {Rattus norvegicus} SCOP: d.50.1.1 PDB: 2l2k_B
Probab=99.48 E-value=4.6e-14 Score=120.56 Aligned_cols=67 Identities=30% Similarity=0.347 Sum_probs=57.6
Q ss_pred CCCchHHHHHHhhhcCCCceeeecCCCCCCCCCCccEEEEEEECCEEEeeeecCCHHHHHHHHHHHHHHHhhcc
Q 002970 741 LMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRSM 814 (862)
Q Consensus 741 ~~N~V~lLnELcqkeGL~~~f~~e~v~~sGp~H~keF~aqV~IdGkvyG~GtGsSKKeAKqqAAe~AL~aL~~~ 814 (862)
.+|||+.|||||. ...|.+. ..+|++|.+.|++.|.|+|+.+ .|.|+|||+|||+||+.||..|.++
T Consensus 3 ~knp~s~L~E~~~--~p~Y~~~----~~~Gp~h~~~F~~~v~v~~~~~-~G~G~SKK~Aeq~AA~~al~~L~~~ 69 (71)
T 2b7v_A 3 GKNPVMILNELRP--GLKYDFL----SESGESHAKSFVMSVVVDGQFF-EGSGRNKKLAKARAAQSALATVFNL 69 (71)
T ss_dssp SSCHHHHHHHHCC--SCEEEEE----ECCCCTTTCCEEEEEECSSCEE-EEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHhCC--CCEEEEE----EeECCCCCceEEEEEEECCEEE-EEeeCCHHHHHHHHHHHHHHHHHhc
Confidence 4699999999973 3334433 3489999999999999999987 9999999999999999999999865
No 51
>2dmy_A Spermatid perinuclear RNA-binding protein; DSRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.50.1.1
Probab=99.47 E-value=1.1e-13 Score=125.42 Aligned_cols=70 Identities=21% Similarity=0.265 Sum_probs=59.4
Q ss_pred CCCCchHHHHHHhhhcCCCceeeecCCCCCCCCCCccEEEEEEECCEEEeeeecCCHHHHHHHHHHHHHHHhhc
Q 002970 740 KLMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRS 813 (862)
Q Consensus 740 ~~~N~V~lLnELcqkeGL~~~f~~e~v~~sGp~H~keF~aqV~IdGkvyG~GtGsSKKeAKqqAAe~AL~aL~~ 813 (862)
...||++.|||+||+..+ ..|.. +..+||+|.+.|++.|.|+|+.| .|.|+|||+|||+||+.||..|..
T Consensus 14 ~~~d~Kt~LqE~~Q~~~~-p~Y~~--~~~~Gp~H~~~F~~~v~v~g~~~-~G~G~SKK~Aeq~AA~~aL~~L~~ 83 (97)
T 2dmy_A 14 KAIDLMNALMRLNQIRPG-LQYKL--LSQSGPVHAPVFTMSVDVDGTTY-EASGPSKKTAKLHVAVKVLQAMGY 83 (97)
T ss_dssp CSSSCTHHHHHHHHHSCS-CCCEE--EEEESCSSSCEEEEEEEETTEEE-EEEESSHHHHHHHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHhcCCC-ceEEE--EEeeCCCCCCeEEEEEEECCEEE-EEeeCCHHHHHHHHHHHHHHHhCC
Confidence 457999999999998632 22332 23479999999999999999999 999999999999999999999953
No 52
>1t4n_A Ribonuclease III; DSRBD, RNA-binding, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.50.1.1
Probab=99.46 E-value=3.6e-14 Score=128.77 Aligned_cols=69 Identities=22% Similarity=0.249 Sum_probs=59.7
Q ss_pred CCchHHHHHHhhhcCCCceeeecCCCCCCCCCCccEEEEEEECCE-EEeeeecCCHHHHHHHHHHHHHHHhhc
Q 002970 742 MGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQ-VLGKGIGSTWDEAKMQAAEKALGSLRS 813 (862)
Q Consensus 742 ~N~V~lLnELcqkeGL~~~f~~e~v~~sGp~H~keF~aqV~IdGk-vyG~GtGsSKKeAKqqAAe~AL~aL~~ 813 (862)
.||++.|||+||+.+. .+.|.. + +.||+|++.|++.|.|+|+ ++|.|+|+|||+|+|+||+.||..|.-
T Consensus 6 ~D~KT~LQE~~Q~~~~-~p~Y~v-~-~~GpdH~k~F~v~v~i~~~~~~g~G~G~SKK~AEQ~AA~~AL~~l~~ 75 (94)
T 1t4n_A 6 MNAKRQLYSLIGYASL-RLHYVT-V-KKPTAVDPNSIVECRVGDGTVLGTGVGRNIKIAGIRAAENALRDKKM 75 (94)
T ss_dssp HHHHHHHHHHTCSSSS-CCEEEE-C-CCCSSSCCSEEEEEECSSSCEEEEEEESSHHHHHHHHHHHHHHCHHH
T ss_pred CCchHHHHHHHcCCCC-CCEEEE-e-eeCCCCCCeEEEEEEECCEEEEEEEEeCCHHHHHHHHHHHHHHHHHH
Confidence 4999999999998754 444433 3 3599999999999999999 999999999999999999999998853
No 53
>1uil_A Double-stranded RNA-binding motif; structural genomics, DSRM, riken structural genomics/proteomics initiative, RSGI RNA binding protein; NMR {Mus musculus} SCOP: d.50.1.1 PDB: 2rs7_A
Probab=99.45 E-value=4.8e-14 Score=131.40 Aligned_cols=70 Identities=13% Similarity=0.153 Sum_probs=62.4
Q ss_pred CCchHHHHHHhhhcCCCceeeecCCCCCCCCCCccEEEEEEE-----CCEEEeeeecCCHHHHHHHHHHHHHHHhhcc
Q 002970 742 MGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEI-----DGQVLGKGIGSTWDEAKMQAAEKALGSLRSM 814 (862)
Q Consensus 742 ~N~V~lLnELcqkeGL~~~f~~e~v~~sGp~H~keF~aqV~I-----dGkvyG~GtGsSKKeAKqqAAe~AL~aL~~~ 814 (862)
.||++.|||+||+.++...|. +..+||+|.+.|++.|.| +|+.||.|.|+|||+|||+||+.||..|...
T Consensus 26 ~d~Kt~LqE~~Qk~~~~p~Y~---~~~~Gp~H~~~F~~~V~v~~~~~~~~~~~~G~G~SKK~AEq~AA~~AL~~L~~~ 100 (113)
T 1uil_A 26 ENAKARLNQYFQKEKIQGEYK---YTQVGPDHNRSFIAEMTIYIKQLGRRIFAREHGSNKKLAAQSCALSLVRQLYHL 100 (113)
T ss_dssp HHHHHHHHHHHHHSCCCCCCE---EEEESCSTTCEEEEEEEEEETTTTEEEEEECCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHCCCCCeEE---EeeECCCCCCcEEEEEEEeeeccCCEEEEEEeeCCHHHHHHHHHHHHHHHHHhc
Confidence 488999999999999933354 246899999999999999 6999999999999999999999999999755
No 54
>3p1x_A Interleukin enhancer-binding factor 3; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.90A {Homo sapiens}
Probab=99.44 E-value=2.3e-13 Score=117.99 Aligned_cols=64 Identities=19% Similarity=0.283 Sum_probs=54.4
Q ss_pred hHHHHHHHHhcCCCeEEEEeee--cCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHhh
Q 002970 613 SGVLQDIAMKCGTKVEFRPALV--ASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLANV 678 (862)
Q Consensus 613 KS~LQE~~QK~~~~l~Y~~v~~--~~Hdk~Ftv~V~i~G~~~G~G~GkSKKeAEq~AA~~AL~~L~~~ 678 (862)
|+-|+||+|++ ..+.|+++.+ ++|+++|+++|.|+|+.+ +|.|+|||+|||+||+.||+.|...
T Consensus 7 K~pl~~L~q~~-~~p~Y~~~~~~Gp~H~~~F~~~v~v~g~~~-~G~G~SKK~Aeq~AA~~al~~L~~~ 72 (75)
T 3p1x_A 7 KNPVMELNEKR-RGLKYELISETGGSHDKRFVMEVEVDGQKF-QGAGSNKKVAKAYAALAALEKLFPD 72 (75)
T ss_dssp CCHHHHHHHHS-TTCCEEEEEEESCTTSCEEEEEEEETTEEE-EEEESSHHHHHHHHHHHHHHHHCTT
T ss_pred CCHHHHHHHcC-CCCEEEEEEeeCCCCCceEEEEEEECCEEE-EEEECCHHHHHHHHHHHHHHHHHcc
Confidence 44555555554 4789999865 679999999999999999 9999999999999999999999664
No 55
>2ljh_A Double-stranded RNA-specific editase ADAR; DSRBD, DSRBM, editing, hydrolase; NMR {Drosophila melanogaster}
Probab=99.42 E-value=2.7e-13 Score=126.86 Aligned_cols=68 Identities=29% Similarity=0.320 Sum_probs=59.0
Q ss_pred CCCCchHHHHHHhhhcCCCceeeecCCCCCCCCCCccEEEEEEECCEEEeeeecCCHHHHHHHHHHHHHHHhhcc
Q 002970 740 KLMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRSM 814 (862)
Q Consensus 740 ~~~N~V~lLnELcqkeGL~~~f~~e~v~~sGp~H~keF~aqV~IdGkvyG~GtGsSKKeAKqqAAe~AL~aL~~~ 814 (862)
...||++.|||+||. ..|.+. .++|++|++.|+++|.|+|+.| .|.|+|||+|||+||+.||..|...
T Consensus 35 ~~kd~Ks~LQE~~q~--p~Y~~v----~~~Gp~H~k~F~v~V~v~g~~~-~G~G~SKK~AEq~AA~~AL~~L~~~ 102 (114)
T 2ljh_A 35 QPKNTVAMLNELRHG--LIYKLE----SQTGPVHAPLFTISVEVDGQKY-LGQGRSKKVARIEAAATALRSFIQF 102 (114)
T ss_dssp CCSCHHHHHHHHCSC--CEEEEE----EEECCSSSCEEEEEEEETTEEE-EEEESSHHHHHHHHHHHHHHHHCCC
T ss_pred CCCCHHHHHHHHccC--CeEEEE----EeeCCCCCCeEEEEEEECCEEE-EeeeCCHHHHHHHHHHHHHHHHHcC
Confidence 446999999999984 444433 3489999999999999999999 9999999999999999999999753
No 56
>2l33_A Interleukin enhancer-binding factor 3; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, DRBM; NMR {Homo sapiens}
Probab=99.41 E-value=1.4e-13 Score=124.02 Aligned_cols=68 Identities=28% Similarity=0.312 Sum_probs=60.1
Q ss_pred CCchHHHHHHhhhcCCCceeeecCCCCCCCCCCccEEEEEEECCEEEeeeecCCHHHHHHHHHHHHHHHhhc
Q 002970 742 MGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRS 813 (862)
Q Consensus 742 ~N~V~lLnELcqkeGL~~~f~~e~v~~sGp~H~keF~aqV~IdGkvyG~GtGsSKKeAKqqAAe~AL~aL~~ 813 (862)
.+|++.|+||||+.+ ...|.. +.++||+|.+.|+++|.|+|++| .|+|+|||+|||+||+.||..|..
T Consensus 14 ~~~K~~LqEl~Qk~~-~p~Y~~--v~~~Gp~H~~~F~v~V~v~g~~~-~G~G~SKK~AEq~AA~~AL~~L~~ 81 (91)
T 2l33_A 14 KHGKNPVMELNEKRR-GLKYEL--ISETGGSHDKRFVMEVEVDGQKF-QGAGSNKKVAKAYAALAALEKLFP 81 (91)
T ss_dssp SSTTCHHHHHHHHCS-SCEEEE--EEEEECSSCEEEEEEEEETTEEE-EEEESSHHHHHHHHHHHHHHHHCC
T ss_pred cCCCCHHHHHHHhCC-CCeEEE--EEeeCCCCCCeEEEEEEECCEEE-EeeeCCHHHHHHHHHHHHHHHHhh
Confidence 489999999999988 444543 34589999999999999999998 999999999999999999999963
No 57
>1t4o_A Ribonuclease III; RNT1P, DSRBD, RNA-binding, hydrolase; 2.50A {Saccharomyces cerevisiae} SCOP: d.50.1.1 PDB: 1t4l_B 2lbs_B
Probab=99.41 E-value=7.3e-14 Score=131.16 Aligned_cols=83 Identities=19% Similarity=0.220 Sum_probs=62.3
Q ss_pred CCCchHHHHHHhhhcCCCceeeecCCCCCCCCCCccEEEEEEECCE-EEeeeecCCHHHHHHHHHHHHHHHhhcccCCCC
Q 002970 741 LMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQ-VLGKGIGSTWDEAKMQAAEKALGSLRSMFGQFP 819 (862)
Q Consensus 741 ~~N~V~lLnELcqkeGL~~~f~~e~v~~sGp~H~keF~aqV~IdGk-vyG~GtGsSKKeAKqqAAe~AL~aL~~~~~~~~ 819 (862)
..||++.|||+||..+ ..+.|.. +. .||+|.+.|++.|.|+|+ ++|.|+|+|||+|+|+||+.||..|.-+. ...
T Consensus 7 ~~D~KT~LQE~~Q~~~-~~P~Y~v-v~-~GPdH~k~F~v~V~i~g~~~~g~G~G~SKK~AEQ~AA~~AL~~l~~l~-Ky~ 82 (117)
T 1t4o_A 7 DMNAKRQLYSLIGYAS-LRLHYVT-VK-KPTAVDPNSIVECRVGDGTVLGTGVGRNIKIAGIRAAENALRDKKMLD-FYA 82 (117)
T ss_dssp CTTHHHHHHHHHCCGG-GCCEEEE-EE-CCCSSCCCEEEEEECTTCCEEEEEEESSHHHHHHHHHHHHHHCHHHHH-HHT
T ss_pred CCCchHHHHHHHcCCC-CCCEEEE-ee-eCCCCCCeEEEEEEECCEEEEEEEEeCCHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 3599999999999855 4443432 33 499999999999999999 99999999999999999999999885442 344
Q ss_pred CccCCCCC
Q 002970 820 QKHQGSPR 827 (862)
Q Consensus 820 pkrq~spr 827 (862)
-.|+..||
T Consensus 83 ~~r~~~~r 90 (117)
T 1t4o_A 83 KQRAAIPR 90 (117)
T ss_dssp C-------
T ss_pred HHHhhcCC
Confidence 55555555
No 58
>1whn_A Hypothetical protein riken cDNA 2310016K04; double-stranded RNA binding domain, DSRBD, DSRM, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.50.1.1
Probab=99.40 E-value=3.6e-13 Score=128.21 Aligned_cols=71 Identities=17% Similarity=0.035 Sum_probs=62.1
Q ss_pred CCCCchHHHHHHhhhcCCCceeeecCCCCCCCCCCccEEEEEEECCEEEeeeec-CCHHHHHHHHHHHHHHHhhcc
Q 002970 740 KLMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIG-STWDEAKMQAAEKALGSLRSM 814 (862)
Q Consensus 740 ~~~N~V~lLnELcqkeGL~~~f~~e~v~~sGp~H~keF~aqV~IdGkvyG~GtG-sSKKeAKqqAAe~AL~aL~~~ 814 (862)
...||++.|||+||+.++..+.|.. +. . +|.+.|++.|.|+|+.||.|.| +|||+|||+||+.||..|...
T Consensus 24 ~~~d~Kt~LQE~~Qk~~~~~P~Y~~-v~-~--~H~~~F~v~V~v~g~~~g~G~G~~SKK~AEQ~AA~~AL~~L~~~ 95 (128)
T 1whn_A 24 PQITPKMCLLEWCRREKLPQPVYET-VQ-R--TIDRMFCSVVTVAEQKYQSTLWDKSKKLAEQTAAIVCLRSQGLP 95 (128)
T ss_dssp TTCCHHHHHHHHHHHTTCCCCCCCE-EE-C--SSSCCEEEEEEETTEEEEESSCBSSHHHHHHHHHHHHHHHHTCS
T ss_pred cCCCHHHHHHHHHHHcCCCCCeEEE-Ee-e--cCCCcEEEEEEECCEEEEEEeccCCHHHHHHHHHHHHHHHHhcc
Confidence 3469999999999999998874432 22 3 8999999999999999999999 999999999999999999643
No 59
>1qu6_A Protein kinase PKR; dsRNA-binding domain, solution structure, transferase; NMR {Homo sapiens} SCOP: d.50.1.1 d.50.1.1
Probab=99.39 E-value=3.8e-13 Score=133.16 Aligned_cols=74 Identities=23% Similarity=0.201 Sum_probs=65.8
Q ss_pred CCCCchHHHHHHhhhcCCCceeeecCCCCCCCCCCccEEEEEEECCEEEeeeecCCHHHHHHHHHHHHHHHhhccc
Q 002970 740 KLMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRSMF 815 (862)
Q Consensus 740 ~~~N~V~lLnELcqkeGL~~~f~~e~v~~sGp~H~keF~aqV~IdGkvyG~GtGsSKKeAKqqAAe~AL~aL~~~~ 815 (862)
..+|||+.||||||+.++...|.. +..+||+|.+.|++.|.|+|+.||.|.|+|||+|||+||+.||..|....
T Consensus 11 ~~~n~ks~LqE~~q~~~~~p~Y~~--~~~~Gp~h~~~F~~~v~v~g~~~~~G~G~sKK~Aeq~AA~~al~~L~~~~ 84 (179)
T 1qu6_A 11 SAGFFMEELNTYRQKQGVVLKYQE--LPNSGPPHDRRFTFQVIIDGREFPEGEGRSKKEAKNAAAKLAVEILNKEK 84 (179)
T ss_dssp SSCSHHHHHHHHHHHHTCCCEEEE--EESCBTTTBCCEEEEEESSSSCCCEEECCSSHHHHHHHHHHHHHHHHSCC
T ss_pred CCCCHHHHHHHHHHhCCCCCeEEE--eeccCCCCCCeEEEEEEECCEEEEecCCCCHHHHHHHHHHHHHHHHhccc
Confidence 447999999999999999865553 34689999999999999999999999999999999999999999997543
No 60
>3p1x_A Interleukin enhancer-binding factor 3; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.90A {Homo sapiens}
Probab=99.38 E-value=8e-13 Score=114.57 Aligned_cols=67 Identities=30% Similarity=0.289 Sum_probs=57.7
Q ss_pred CCCCchHHHHHHhhhcCCCceeeecCCCCCCCCCCccEEEEEEECCEEEeeeecCCHHHHHHHHHHHHHHHhhc
Q 002970 740 KLMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRS 813 (862)
Q Consensus 740 ~~~N~V~lLnELcqkeGL~~~f~~e~v~~sGp~H~keF~aqV~IdGkvyG~GtGsSKKeAKqqAAe~AL~aL~~ 813 (862)
..+||++.|+|++. ...|.... .+|++|++.|++.|.|+|+.| .|+|+|||+|||+||+.||..|..
T Consensus 5 ~~K~pl~~L~q~~~--~p~Y~~~~----~~Gp~H~~~F~~~v~v~g~~~-~G~G~SKK~Aeq~AA~~al~~L~~ 71 (75)
T 3p1x_A 5 HGKNPVMELNEKRR--GLKYELIS----ETGGSHDKRFVMEVEVDGQKF-QGAGSNKKVAKAYAALAALEKLFP 71 (75)
T ss_dssp -CCCHHHHHHHHST--TCCEEEEE----EESCTTSCEEEEEEEETTEEE-EEEESSHHHHHHHHHHHHHHHHCT
T ss_pred CCCCHHHHHHHcCC--CCEEEEEE----eeCCCCCceEEEEEEECCEEE-EEEECCHHHHHHHHHHHHHHHHHc
Confidence 45699999999973 55555443 489999999999999999999 999999999999999999999953
No 61
>1o0w_A Ribonuclease III, RNAse III; TM1102, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 2.00A {Thermotoga maritima} SCOP: a.149.1.1 d.50.1.1
Probab=99.37 E-value=9.9e-13 Score=136.41 Aligned_cols=70 Identities=24% Similarity=0.287 Sum_probs=62.3
Q ss_pred CCCchHHHHHHHHhcCC-CeEEEEeee--cCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHhh
Q 002970 609 TETPSGVLQDIAMKCGT-KVEFRPALV--ASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLANV 678 (862)
Q Consensus 609 ~~n~KS~LQE~~QK~~~-~l~Y~~v~~--~~Hdk~Ftv~V~i~G~~~G~G~GkSKKeAEq~AA~~AL~~L~~~ 678 (862)
..+||+.||||||+.+. .++|+++.+ ++|++.|+|.|+|+|+.+|+|.|+|||+|||.||+.||+.|..+
T Consensus 178 ~~dpkt~LqE~~q~~~~~~p~Y~~~~~~Gp~h~~~F~v~v~v~g~~~~~G~G~SKK~Aeq~AA~~AL~~L~~~ 250 (252)
T 1o0w_A 178 LFDYKTALQEIVQSEHKVPPEYILVRTEKNDGDRIFVVEVRVNGKTIATGKGRTKKEAEKEAARIAYEKLLKE 250 (252)
T ss_dssp CSCHHHHHHHHHHHHHSSCCEEEEEEEECCTTSCEEEEEEEETTEEEEEEEESSHHHHHHHHHHHHHHHHC--
T ss_pred ccCHHHHHHHHHHHcCCCCceEEEEeeeCCCCCCeEEEEEEECCEEEEEEeeCCHHHHHHHHHHHHHHHHhhc
Confidence 35799999999999886 589998764 56999999999999999999999999999999999999999643
No 62
>2nug_A Ribonuclease III, RNAse III; dsRNA, RNA interference, endonucleolytic cleavage, hydrolase/RNA complex; 1.70A {Aquifex aeolicus} SCOP: a.149.1.1 d.50.1.1 PDB: 1yyw_A 2nue_A 2nuf_A 1yyk_A 1yz9_A 1yyo_A 2ez6_A 1rc7_A 1i4s_A 1jfz_A 1rc5_A
Probab=99.37 E-value=8.4e-13 Score=134.06 Aligned_cols=67 Identities=30% Similarity=0.345 Sum_probs=61.0
Q ss_pred CCCchHHHHHHHHhcCCC-eEEEEeee--cCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHH
Q 002970 609 TETPSGVLQDIAMKCGTK-VEFRPALV--ASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLA 676 (862)
Q Consensus 609 ~~n~KS~LQE~~QK~~~~-l~Y~~v~~--~~Hdk~Ftv~V~i~G~~~G~G~GkSKKeAEq~AA~~AL~~L~ 676 (862)
..+||+.||||||+++.. ++|+++.+ ++|++.|+|+|+|+|+ +|+|.|+|||+|||.||+.||+.|.
T Consensus 149 ~~~pks~LqE~~q~~~~~~p~Y~~~~~~G~~h~~~F~v~v~v~~~-~~~G~G~skK~Ae~~AA~~AL~~L~ 218 (221)
T 2nug_A 149 KKDYKTILQEITQKRWKERPEYRLISVEGPHHKKKFIVEAKIKEY-RTLGEGKSKKEAEQRAAEELIKLLE 218 (221)
T ss_dssp CCCHHHHHHHHHHHHHSCCCEEEEEEEESCGGGCEEEEEEEETTE-EEEEEESSHHHHHHHHHHHHHHHHC
T ss_pred ccCHHHHHHHHHHHcCCCCceEEEEEeeCCCCCceEEEEEEECCE-EEEEecCCHHHHHHHHHHHHHHHhh
Confidence 357999999999998865 79998765 5789999999999999 9999999999999999999999985
No 63
>3n3w_A Ribonuclease III; nuclease domain, ribonuclase III, IDP90862, csgid, structura genomics; 2.21A {Campylobacter jejuni subsp}
Probab=99.24 E-value=6.6e-13 Score=137.88 Aligned_cols=69 Identities=20% Similarity=0.275 Sum_probs=0.0
Q ss_pred CCCchHHHHHHHHhcCCC-eEEEEeee--cCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHh
Q 002970 609 TETPSGVLQDIAMKCGTK-VEFRPALV--ASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLAN 677 (862)
Q Consensus 609 ~~n~KS~LQE~~QK~~~~-l~Y~~v~~--~~Hdk~Ftv~V~i~G~~~G~G~GkSKKeAEq~AA~~AL~~L~~ 677 (862)
..+||+.||||||+++.. ++|+++.+ ++|+++|+|+|+|+|+.+|+|+|+|||+|||+||+.||+.|.+
T Consensus 176 ~~dpks~LqE~~q~~~~~~p~Y~~~~~~Gp~h~~~F~v~v~v~g~~~~~G~G~SKK~Aeq~AA~~AL~~L~~ 247 (248)
T 3n3w_A 176 IKDYKTKLQEITQGKIGQTPQYETVRAFGPDHLKQFEIALMLDGKELARAIAGSKKEAQQMAAKIALEKLGA 247 (248)
T ss_dssp ------------------------------------------------------------------------
T ss_pred ccCHHHHHHHHHHHcCCCCCceEEeeccCCCCCceEEEEEEECCEEEEEeeeCCHHHHHHHHHHHHHHHHHc
Confidence 467999999999998865 69998754 5799999999999999999999999999999999999998853
No 64
>2nug_A Ribonuclease III, RNAse III; dsRNA, RNA interference, endonucleolytic cleavage, hydrolase/RNA complex; 1.70A {Aquifex aeolicus} SCOP: a.149.1.1 d.50.1.1 PDB: 1yyw_A 2nue_A 2nuf_A 1yyk_A 1yz9_A 1yyo_A 2ez6_A 1rc7_A 1i4s_A 1jfz_A 1rc5_A
Probab=99.24 E-value=4.5e-12 Score=128.71 Aligned_cols=70 Identities=19% Similarity=0.097 Sum_probs=62.2
Q ss_pred CCCchHHHHHHhhhcCCCceeeecCCCCCCCCCCccEEEEEEECCEEEeeeecCCHHHHHHHHHHHHHHHhh
Q 002970 741 LMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLR 812 (862)
Q Consensus 741 ~~N~V~lLnELcqkeGL~~~f~~e~v~~sGp~H~keF~aqV~IdGkvyG~GtGsSKKeAKqqAAe~AL~aL~ 812 (862)
..||++.|||+||+.++..+.|.. +..+|++|.+.|++.|.|+|+ +|.|+|+|||+|||+||+.||..|.
T Consensus 149 ~~~pks~LqE~~q~~~~~~p~Y~~-~~~~G~~h~~~F~v~v~v~~~-~~~G~G~skK~Ae~~AA~~AL~~L~ 218 (221)
T 2nug_A 149 KKDYKTILQEITQKRWKERPEYRL-ISVEGPHHKKKFIVEAKIKEY-RTLGEGKSKKEAEQRAAEELIKLLE 218 (221)
T ss_dssp CCCHHHHHHHHHHHHHSCCCEEEE-EEEESCGGGCEEEEEEEETTE-EEEEEESSHHHHHHHHHHHHHHHHC
T ss_pred ccCHHHHHHHHHHHcCCCCceEEE-EEeeCCCCCceEEEEEEECCE-EEEEecCCHHHHHHHHHHHHHHHhh
Confidence 469999999999999988654432 345799999999999999999 9999999999999999999999985
No 65
>1o0w_A Ribonuclease III, RNAse III; TM1102, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 2.00A {Thermotoga maritima} SCOP: a.149.1.1 d.50.1.1
Probab=99.23 E-value=5.9e-12 Score=130.61 Aligned_cols=72 Identities=22% Similarity=0.202 Sum_probs=63.0
Q ss_pred CCCchHHHHHHhhhcCCCceeeecCCCCCCCCCCccEEEEEEECCEEEeeeecCCHHHHHHHHHHHHHHHhhc
Q 002970 741 LMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRS 813 (862)
Q Consensus 741 ~~N~V~lLnELcqkeGL~~~f~~e~v~~sGp~H~keF~aqV~IdGkvyG~GtGsSKKeAKqqAAe~AL~aL~~ 813 (862)
..|||+.|||+||+.++..+.|.. +..+|++|.+.|++.|.|+|+.+|.|+|+|||+|||+||+.||..|..
T Consensus 178 ~~dpkt~LqE~~q~~~~~~p~Y~~-~~~~Gp~h~~~F~v~v~v~g~~~~~G~G~SKK~Aeq~AA~~AL~~L~~ 249 (252)
T 1o0w_A 178 LFDYKTALQEIVQSEHKVPPEYIL-VRTEKNDGDRIFVVEVRVNGKTIATGKGRTKKEAEKEAARIAYEKLLK 249 (252)
T ss_dssp CSCHHHHHHHHHHHHHSSCCEEEE-EEEECCTTSCEEEEEEEETTEEEEEEEESSHHHHHHHHHHHHHHHHC-
T ss_pred ccCHHHHHHHHHHHcCCCCceEEE-EeeeCCCCCCeEEEEEEECCEEEEEEeeCCHHHHHHHHHHHHHHHHhh
Confidence 469999999999999986554432 345799999999999999999999999999999999999999999953
No 66
>2yt4_A Protein DGCR8; DSRBD, RNA binding domain, RNA binding protein; 2.60A {Homo sapiens}
Probab=99.21 E-value=1.6e-11 Score=126.67 Aligned_cols=71 Identities=25% Similarity=0.133 Sum_probs=61.8
Q ss_pred CCCCchHHHHHHhhhcCCCceeeecCCCCCCCCCCccEEEEEEECCEEEeeeecCCHHHHHHHHHHHHHHHhhc
Q 002970 740 KLMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRS 813 (862)
Q Consensus 740 ~~~N~V~lLnELcqkeGL~~~f~~e~v~~sGp~H~keF~aqV~IdGkvyG~GtGsSKKeAKqqAAe~AL~aL~~ 813 (862)
..+|||+.||||||+.++..+-|.. +..+|++ +.|++.|.|+|+.||.|.|+|||+|||+||+.||..|..
T Consensus 20 ~~kd~ks~LqE~~q~~~~~~p~Y~~-~~~~Gp~--~~F~~~v~v~g~~~~~G~G~SKK~Aeq~AA~~aL~~L~~ 90 (232)
T 2yt4_A 20 NGKSEVCILHEYMQRVLKVRPVYNF-FECENPS--EPFGASVTIDGVTYGSGTASSKKLAKNKAARATLEILIP 90 (232)
T ss_dssp TTSCHHHHHHHHHHHTTCCCCEEEE-EECSCTT--SCEEEEEEETTEEEEEEEESSHHHHHHHHHHHHHHHHST
T ss_pred CCCCHHHHHHHHHHHcCCCCCeEEE-EeeECCC--CcEEEEEEECCEEEeecCCCCHHHHHHHHHHHHHHHHHh
Confidence 4469999999999999987653332 3457887 899999999999999999999999999999999999975
No 67
>2a11_A Ribonuclease III, RNAse III; nuclease domain, structural genomic protein structure initiative; 2.10A {Mycobacterium tuberculosis}
Probab=99.21 E-value=1.3e-12 Score=134.33 Aligned_cols=69 Identities=20% Similarity=0.315 Sum_probs=0.0
Q ss_pred CCchHHHHHHHHhcCC-CeEEEEeee-cCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHhh
Q 002970 610 ETPSGVLQDIAMKCGT-KVEFRPALV-ASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLANV 678 (862)
Q Consensus 610 ~n~KS~LQE~~QK~~~-~l~Y~~v~~-~~Hdk~Ftv~V~i~G~~~G~G~GkSKKeAEq~AA~~AL~~L~~~ 678 (862)
.+||+.||||||+++. .++|+++.+ ++|++.|+|.|+|+|+.+|+|.|+|||+|||.||+.||+.|...
T Consensus 162 ~dpkt~Lqe~~q~~~~~~p~Y~~~~~Gp~h~~~F~v~v~v~g~~~~~G~G~skk~Ae~~AA~~AL~~L~~~ 232 (242)
T 2a11_A 162 LDWKTSLQELTAARGLGAPSYLVTSTGPDHDKEFTAVVVVMDSEYGSGVGRSKKEAEQKAAAAAWKALEVL 232 (242)
T ss_dssp -----------------------------------------------------------------------
T ss_pred CChHHHHHHHHHHhCCCCCeEEEeccCCCCCCeEEEEEEECCEEEEEeeeCCHHHHHHHHHHHHHHHHhhc
Confidence 4799999999999885 579998753 57999999999999999999999999999999999999999754
No 68
>2l3j_A Double-stranded RNA-specific editase 1; editing, dsRNA recognition, DSRBM, hydrolase-RNA complex; NMR {Rattus norvegicus}
Probab=99.17 E-value=5.1e-11 Score=123.03 Aligned_cols=64 Identities=20% Similarity=0.349 Sum_probs=57.2
Q ss_pred CCCchHHHHHHHHhcCCCeEEEEeee--cCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHh
Q 002970 609 TETPSGVLQDIAMKCGTKVEFRPALV--ASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLAN 677 (862)
Q Consensus 609 ~~n~KS~LQE~~QK~~~~l~Y~~v~~--~~Hdk~Ftv~V~i~G~~~G~G~GkSKKeAEq~AA~~AL~~L~~ 677 (862)
..+||+.|||| ...+.|+++.+ ++|+++|+++|.|+|+.+ +|.|+|||+|||+||+.||+.|..
T Consensus 160 ~~d~ks~LqE~----~~~p~Y~~~~~~Gp~h~~~F~~~v~v~~~~~-~G~G~sKK~Aeq~AA~~al~~L~~ 225 (236)
T 2l3j_A 160 GKNPVMILNEL----RPGLKYDFLSESGESHAKSFVMSVVVDGQFF-EGSGRNKKLAKARAAQSALATVFN 225 (236)
T ss_dssp SCCHHHHHHHH----CCCEEEEEECCSSSSSSCCEEEEEEETTEEE-EEEESSHHHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHhc----CCCCcEEEEEeeCCCCCCeEEEEEEECCEEE-EeeeCCHHHHHHHHHHHHHHHHcc
Confidence 45899999999 45689998765 579999999999999986 999999999999999999999964
No 69
>3n3w_A Ribonuclease III; nuclease domain, ribonuclase III, IDP90862, csgid, structura genomics; 2.21A {Campylobacter jejuni subsp}
Probab=99.16 E-value=2.8e-12 Score=133.15 Aligned_cols=72 Identities=18% Similarity=0.147 Sum_probs=0.0
Q ss_pred CCCchHHHHHHhhhcCCCceeeecCCCCCCCCCCccEEEEEEECCEEEeeeecCCHHHHHHHHHHHHHHHhhc
Q 002970 741 LMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRS 813 (862)
Q Consensus 741 ~~N~V~lLnELcqkeGL~~~f~~e~v~~sGp~H~keF~aqV~IdGkvyG~GtGsSKKeAKqqAAe~AL~aL~~ 813 (862)
..|||+.|||+||+.++..+.|.. +..+|++|.+.|++.|.|+|+.+|.|+|+|||+|||+||+.||..|..
T Consensus 176 ~~dpks~LqE~~q~~~~~~p~Y~~-~~~~Gp~h~~~F~v~v~v~g~~~~~G~G~SKK~Aeq~AA~~AL~~L~~ 247 (248)
T 3n3w_A 176 IKDYKTKLQEITQGKIGQTPQYET-VRAFGPDHLKQFEIALMLDGKELARAIAGSKKEAQQMAAKIALEKLGA 247 (248)
T ss_dssp -------------------------------------------------------------------------
T ss_pred ccCHHHHHHHHHHHcCCCCCceEE-eeccCCCCCceEEEEEEECCEEEEEeeeCCHHHHHHHHHHHHHHHHHc
Confidence 469999999999999998875544 456899999999999999999999999999999999999999999864
No 70
>2a11_A Ribonuclease III, RNAse III; nuclease domain, structural genomic protein structure initiative; 2.10A {Mycobacterium tuberculosis}
Probab=99.08 E-value=1.2e-11 Score=127.27 Aligned_cols=71 Identities=27% Similarity=0.288 Sum_probs=0.0
Q ss_pred CCCchHHHHHHhhhcCCCceeeecCCCCCCCCCCccEEEEEEECCEEEeeeecCCHHHHHHHHHHHHHHHhhc
Q 002970 741 LMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRS 813 (862)
Q Consensus 741 ~~N~V~lLnELcqkeGL~~~f~~e~v~~sGp~H~keF~aqV~IdGkvyG~GtGsSKKeAKqqAAe~AL~aL~~ 813 (862)
..|||+.|||+||+.++..+.|.. + .+|++|.+.|++.|.|+|+.+|.|+|+|||+|||+||+.||..|..
T Consensus 161 ~~dpkt~Lqe~~q~~~~~~p~Y~~-~-~~Gp~h~~~F~v~v~v~g~~~~~G~G~skk~Ae~~AA~~AL~~L~~ 231 (242)
T 2a11_A 161 GLDWKTSLQELTAARGLGAPSYLV-T-STGPDHDKEFTAVVVVMDSEYGSGVGRSKKEAEQKAAAAAWKALEV 231 (242)
T ss_dssp -------------------------------------------------------------------------
T ss_pred cCChHHHHHHHHHHhCCCCCeEEE-e-ccCCCCCCeEEEEEEECCEEEEEeeeCCHHHHHHHHHHHHHHHHhh
Confidence 359999999999999987664443 2 3899999999999999999999999999999999999999999964
No 71
>3rv0_A K. polysporus DCR1; RNAse III enzyme, RNA binding protein; 2.29A {Vanderwaltozyma polyspora}
Probab=98.98 E-value=4.9e-11 Score=129.53 Aligned_cols=66 Identities=18% Similarity=0.217 Sum_probs=0.0
Q ss_pred CCCchHHHHHHHHhcCC--CeEEEEeeecCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHh
Q 002970 609 TETPSGVLQDIAMKCGT--KVEFRPALVASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLAN 677 (862)
Q Consensus 609 ~~n~KS~LQE~~QK~~~--~l~Y~~v~~~~Hdk~Ftv~V~i~G~~~G~G~GkSKKeAEq~AA~~AL~~L~~ 677 (862)
..+|||.||||+|+++. .++|+++.+.+. |+|+|+|+|+.+|+|+|+|||+|||+||+.||+.|..
T Consensus 253 ~~d~Kt~LqE~~Q~~~~~~~~~Y~~~~~~Gp---F~v~v~i~~~~~g~G~G~SKK~AEq~AA~~AL~~L~~ 320 (341)
T 3rv0_A 253 NKNAKNELAELLQINKLGHKLHYRKLTEMPP---FRVEVKIGDILLDEAEGNSIREAEHRAAMKVLENDEL 320 (341)
T ss_dssp -----------------------------------------------------------------------
T ss_pred ccCHHHHHHHHHHHcCCCCCceEEEEeccCC---EEEEEEECCEEEEEEEeCCHHHHHHHHHHHHHHHhhh
Confidence 35799999999999874 469998755432 9999999999999999999999999999999999964
No 72
>3c4b_A Endoribonuclease dicer; RNAse, dsRNA binding protein, ATP-binding, endonuclease, HEL hydrolase, nucleotide-binding, phosphoprotein, RN binding; HET: MSE; 1.68A {Mus musculus} PDB: 3c4t_A 2eb1_A
Probab=98.93 E-value=1.2e-09 Score=113.56 Aligned_cols=65 Identities=20% Similarity=0.310 Sum_probs=52.2
Q ss_pred chHHHHHHHHhcCCCeEEEEeeecCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHh
Q 002970 612 PSGVLQDIAMKCGTKVEFRPALVASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLAN 677 (862)
Q Consensus 612 ~KS~LQE~~QK~~~~l~Y~~v~~~~Hdk~Ftv~V~i~G~~~G~G~GkSKKeAEq~AA~~AL~~L~~ 677 (862)
+|+.||||.|.+.....|... ...|++.|+|.|+|+|+.+|+|.|+|||+|||+||+.||++|..
T Consensus 199 ~k~~l~el~~~~~~~~~~~~~-~~~~~~~f~v~v~v~~~~~~~G~G~SkK~Aeq~AA~~AL~~l~~ 263 (265)
T 3c4b_A 199 PRSPVRELLEMEPETAKFSPA-ERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKA 263 (265)
T ss_dssp CCCHHHHHHHHCTTTEEECCC-EECTTSCEEEEEEETTTEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHhccCCceeeec-cccCCCcEEEEEEEecceEEEEeeCCHHHHHHHHHHHHHHHHhh
Confidence 456666666665544444432 24699999999999999999999999999999999999999964
No 73
>3rv0_A K. polysporus DCR1; RNAse III enzyme, RNA binding protein; 2.29A {Vanderwaltozyma polyspora}
Probab=98.67 E-value=2.3e-09 Score=116.43 Aligned_cols=69 Identities=22% Similarity=0.199 Sum_probs=0.0
Q ss_pred CCCchHHHHHHhhhcCCCce-eeecCCCCCCCCCCccEEEEEEECCEEEeeeecCCHHHHHHHHHHHHHHHhhccc
Q 002970 741 LMGSVSALKELCMTEGLGVV-FQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRSMF 815 (862)
Q Consensus 741 ~~N~V~lLnELcqkeGL~~~-f~~e~v~~sGp~H~keF~aqV~IdGkvyG~GtGsSKKeAKqqAAe~AL~aL~~~~ 815 (862)
..||++.|||+||+.++..+ .|.. +.++|+ |++.|.|+|+.+|.|+|+|||+|||+||+.||..|..+.
T Consensus 253 ~~d~Kt~LqE~~Q~~~~~~~~~Y~~-~~~~Gp-----F~v~v~i~~~~~g~G~G~SKK~AEq~AA~~AL~~L~~~~ 322 (341)
T 3rv0_A 253 NKNAKNELAELLQINKLGHKLHYRK-LTEMPP-----FRVEVKIGDILLDEAEGNSIREAEHRAAMKVLENDELLR 322 (341)
T ss_dssp ----------------------------------------------------------------------------
T ss_pred ccCHHHHHHHHHHHcCCCCCceEEE-EeccCC-----EEEEEEECCEEEEEEEeCCHHHHHHHHHHHHHHHhhhhh
Confidence 46999999999999887543 2322 233454 999999999999999999999999999999999997653
No 74
>3c4b_A Endoribonuclease dicer; RNAse, dsRNA binding protein, ATP-binding, endonuclease, HEL hydrolase, nucleotide-binding, phosphoprotein, RN binding; HET: MSE; 1.68A {Mus musculus} PDB: 3c4t_A 2eb1_A
Probab=98.56 E-value=5.7e-08 Score=100.94 Aligned_cols=64 Identities=30% Similarity=0.307 Sum_probs=49.6
Q ss_pred CCchHHHHHHhhhcCCCceeeecCCCCCCCCCCccEEEEEEECCEEEeeeecCCHHHHHHHHHHHHHHHhhc
Q 002970 742 MGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRS 813 (862)
Q Consensus 742 ~N~V~lLnELcqkeGL~~~f~~e~v~~sGp~H~keF~aqV~IdGkvyG~GtGsSKKeAKqqAAe~AL~aL~~ 813 (862)
++++..|.|+|++ +..+. ..+..|.+.|++.|.|+|+.+|+|+|+|||+|||+||+.||..|..
T Consensus 200 k~~l~el~~~~~~----~~~~~----~~~~~~~~~f~v~v~v~~~~~~~G~G~SkK~Aeq~AA~~AL~~l~~ 263 (265)
T 3c4b_A 200 RSPVRELLEMEPE----TAKFS----PAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKA 263 (265)
T ss_dssp CCHHHHHHHHCTT----TEEEC----CCEECTTSCEEEEEEETTTEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHhccC----Cceee----eccccCCCcEEEEEEEecceEEEEeeCCHHHHHHHHHHHHHHHHhh
Confidence 3555555555542 33232 2456788999999999999999999999999999999999999963
No 75
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=97.88 E-value=0.00011 Score=70.60 Aligned_cols=80 Identities=20% Similarity=0.300 Sum_probs=57.1
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccC-CCccc----hhhhccC
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKS-GSRKS----LFNVFQD 239 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres-~~~Ks----L~~lfp~ 239 (862)
+++.||+.+++.+|+ +..|.+.|.|++.+.++..+++.+ +...+|+-+++.++ +..|. +..++..
T Consensus 83 ~~~~pg~~~~l~~L~---~~g~~~~i~tn~~~~~~~~~l~~~-------~l~~~fd~~~~~~~~~~~KP~p~~~~~a~~~ 152 (216)
T 3kbb_A 83 LKENPGVREALEFVK---SKRIKLALATSTPQREALERLRRL-------DLEKYFDVMVFGDQVKNGKPDPEIYLLVLER 152 (216)
T ss_dssp CCBCTTHHHHHHHHH---HTTCEEEEECSSCHHHHHHHHHHT-------TCGGGCSEEECGGGSSSCTTSTHHHHHHHHH
T ss_pred cccCccHHHHHHHHH---HcCCCcccccCCcHHHHHHHHHhc-------CCCccccccccccccCCCcccHHHHHHHHHh
Confidence 466799999888887 677999999999999999999984 44556678887643 22221 2222211
Q ss_pred CCCCCcEEEEEcCCc
Q 002970 240 GTCHPKMALVIDDRL 254 (862)
Q Consensus 240 ~~~~~~~vVIIDDR~ 254 (862)
.++.++-+|+|+|+.
T Consensus 153 lg~~p~e~l~VgDs~ 167 (216)
T 3kbb_A 153 LNVVPEKVVVFEDSK 167 (216)
T ss_dssp HTCCGGGEEEEECSH
T ss_pred hCCCccceEEEecCH
Confidence 126778899999985
No 76
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=97.84 E-value=6.4e-05 Score=71.75 Aligned_cols=80 Identities=14% Similarity=0.189 Sum_probs=57.3
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCcccccccc--CeEEeccCCCcc----chhhhcc
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELL--DRIVCVKSGSRK----SLFNVFQ 238 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~--~RIisres~~~K----sL~~lfp 238 (862)
+++.|++.+++.+|+ ..-|.++|+|++.+.++..+++.+. ...+| +.|++.+.+..| .+..++.
T Consensus 69 ~~~~~~~~~~l~~l~---~~g~~~~i~s~~~~~~~~~~l~~~~-------l~~~f~~~~i~~~~~~~~kp~~~~~~~~~~ 138 (205)
T 3m9l_A 69 SRPAPGAVELVRELA---GRGYRLGILTRNARELAHVTLEAIG-------LADCFAEADVLGRDEAPPKPHPGGLLKLAE 138 (205)
T ss_dssp EEECTTHHHHHHHHH---HTTCEEEEECSSCHHHHHHHHHHTT-------CGGGSCGGGEECTTTSCCTTSSHHHHHHHH
T ss_pred CCCCccHHHHHHHHH---hcCCeEEEEeCCchHHHHHHHHHcC-------chhhcCcceEEeCCCCCCCCCHHHHHHHHH
Confidence 567899999777776 4559999999999999999998854 33445 578877554333 3444443
Q ss_pred CCCCCCcEEEEEcCCc
Q 002970 239 DGTCHPKMALVIDDRL 254 (862)
Q Consensus 239 ~~~~~~~~vVIIDDR~ 254 (862)
.....++-+++|+|+.
T Consensus 139 ~~g~~~~~~i~iGD~~ 154 (205)
T 3m9l_A 139 AWDVSPSRMVMVGDYR 154 (205)
T ss_dssp HTTCCGGGEEEEESSH
T ss_pred HcCCCHHHEEEECCCH
Confidence 3236678899999975
No 77
>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}
Probab=97.72 E-value=0.0001 Score=69.77 Aligned_cols=80 Identities=13% Similarity=0.179 Sum_probs=54.3
Q ss_pred EeeCcChHHHHHHHhhhccc-cEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCCCccchhhhccCCCCC
Q 002970 165 VRLRPAWEDLRSYLTARGRK-RFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSGSRKSLFNVFQDGTCH 243 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk-~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres~~~KsL~~lfp~~~~~ 243 (862)
+++.|++.+++..|+ .. .|.+.|+|++.+.++..+++.+. ...+++.|++........+..++...+..
T Consensus 104 ~~~~~~~~~~l~~l~---~~g~~~~~i~t~~~~~~~~~~l~~~~-------~~~~f~~~~~~~kpk~~~~~~~~~~lgi~ 173 (234)
T 3ddh_A 104 IELLPGVKETLKTLK---ETGKYKLVVATKGDLLDQENKLERSG-------LSPYFDHIEVMSDKTEKEYLRLLSILQIA 173 (234)
T ss_dssp CCBCTTHHHHHHHHH---HHCCCEEEEEEESCHHHHHHHHHHHT-------CGGGCSEEEEESCCSHHHHHHHHHHHTCC
T ss_pred CCcCccHHHHHHHHH---hCCCeEEEEEeCCchHHHHHHHHHhC-------cHhhhheeeecCCCCHHHHHHHHHHhCCC
Confidence 456799999766665 33 39999999999999999888743 33455677776433333333333222267
Q ss_pred CcEEEEEcCCc
Q 002970 244 PKMALVIDDRL 254 (862)
Q Consensus 244 ~~~vVIIDDR~ 254 (862)
++-+|+|+|+.
T Consensus 174 ~~~~i~iGD~~ 184 (234)
T 3ddh_A 174 PSELLMVGNSF 184 (234)
T ss_dssp GGGEEEEESCC
T ss_pred cceEEEECCCc
Confidence 78899999984
No 78
>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0
Probab=97.55 E-value=0.00011 Score=69.97 Aligned_cols=80 Identities=16% Similarity=0.082 Sum_probs=51.9
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccC-------------C--C
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKS-------------G--S 229 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres-------------~--~ 229 (862)
++++|++.+++.+|+ ..-|.++|+|++.+.++..+++.+.- ..+++.+++.++ + .
T Consensus 74 ~~~~~~~~~~l~~l~---~~g~~~~i~S~~~~~~~~~~l~~~gl-------~~~f~~~~~~~~~~~~~~~~~~~~~~k~k 143 (217)
T 3m1y_A 74 LPLFEGALELVSALK---EKNYKVVCFSGGFDLATNHYRDLLHL-------DAAFSNTLIVENDALNGLVTGHMMFSHSK 143 (217)
T ss_dssp CCBCBTHHHHHHHHH---TTTEEEEEEEEEEHHHHHHHHHHHTC-------SEEEEEEEEEETTEEEEEEEESCCSTTHH
T ss_pred CcCCCCHHHHHHHHH---HCCCEEEEEcCCchhHHHHHHHHcCc-------chhccceeEEeCCEEEeeeccCCCCCCCh
Confidence 457899999777776 45699999999999999999998643 233345554322 1 1
Q ss_pred ccchhhhccCCCCCCcEEEEEcCCc
Q 002970 230 RKSLFNVFQDGTCHPKMALVIDDRL 254 (862)
Q Consensus 230 ~KsL~~lfp~~~~~~~~vVIIDDR~ 254 (862)
...+..++......++-++.|+|+.
T Consensus 144 ~~~~~~~~~~~g~~~~~~i~vGDs~ 168 (217)
T 3m1y_A 144 GEMLLVLQRLLNISKTNTLVVGDGA 168 (217)
T ss_dssp HHHHHHHHHHHTCCSTTEEEEECSG
T ss_pred HHHHHHHHHHcCCCHhHEEEEeCCH
Confidence 1122223221125667788898875
No 79
>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A
Probab=97.49 E-value=0.00034 Score=66.79 Aligned_cols=76 Identities=13% Similarity=0.179 Sum_probs=51.4
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC------------Cccc
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG------------SRKS 232 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres~------------~~Ks 232 (862)
+++.|++.+++..|+ .. |.++|+|++.+.++..+++.++=. .+|. +.+++.+++ ..+.
T Consensus 68 ~~~~~g~~~~l~~l~---~~-~~~~i~s~~~~~~~~~~l~~~gl~-~~f~-----~~~~~~~~~~~~~~~~p~p~~~~~~ 137 (206)
T 1rku_A 68 LKPLEGAVEFVDWLR---ER-FQVVILSDTFYEFSQPLMRQLGFP-TLLC-----HKLEIDDSDRVVGYQLRQKDPKRQS 137 (206)
T ss_dssp CCCCTTHHHHHHHHH---TT-SEEEEEEEEEHHHHHHHHHHTTCC-CEEE-----EEEEECTTSCEEEEECCSSSHHHHH
T ss_pred cCCCccHHHHHHHHH---hc-CcEEEEECChHHHHHHHHHHcCCc-ceec-----ceeEEcCCceEEeeecCCCchHHHH
Confidence 456899999777775 44 999999999999999999986533 2453 456553322 1123
Q ss_pred hhhhccCCCCCCcEEEEEcCCc
Q 002970 233 LFNVFQDGTCHPKMALVIDDRL 254 (862)
Q Consensus 233 L~~lfp~~~~~~~~vVIIDDR~ 254 (862)
|+++- ..+.-+++|+|+.
T Consensus 138 l~~l~----~~~~~~~~iGD~~ 155 (206)
T 1rku_A 138 VIAFK----SLYYRVIAAGDSY 155 (206)
T ss_dssp HHHHH----HTTCEEEEEECSS
T ss_pred HHHHH----hcCCEEEEEeCCh
Confidence 44432 2456788888874
No 80
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=97.48 E-value=0.00018 Score=67.24 Aligned_cols=80 Identities=10% Similarity=0.105 Sum_probs=56.1
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-Ccc----chhhhccC
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-SRK----SLFNVFQD 239 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres~-~~K----sL~~lfp~ 239 (862)
+++.|++.+++.+|+ ..-+.++|+|++.+.++..+++.+ +...+++.+++.+.. ..| -+..++..
T Consensus 88 ~~~~~~~~~~l~~l~---~~g~~~~i~s~~~~~~~~~~l~~~-------~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~ 157 (214)
T 3e58_A 88 ELIFPDVLKVLNEVK---SQGLEIGLASSSVKADIFRALEEN-------RLQGFFDIVLSGEEFKESKPNPEIYLTALKQ 157 (214)
T ss_dssp HHBCTTHHHHHHHHH---HTTCEEEEEESSCHHHHHHHHHHT-------TCGGGCSEEEEGGGCSSCTTSSHHHHHHHHH
T ss_pred CCcCchHHHHHHHHH---HCCCCEEEEeCCcHHHHHHHHHHc-------CcHhheeeEeecccccCCCCChHHHHHHHHH
Confidence 356799999777776 455999999999999999999884 444566788887542 222 23333322
Q ss_pred CCCCCcEEEEEcCCc
Q 002970 240 GTCHPKMALVIDDRL 254 (862)
Q Consensus 240 ~~~~~~~vVIIDDR~ 254 (862)
....++-++.|+|+.
T Consensus 158 ~~~~~~~~~~iGD~~ 172 (214)
T 3e58_A 158 LNVQASRALIIEDSE 172 (214)
T ss_dssp HTCCGGGEEEEECSH
T ss_pred cCCChHHeEEEeccH
Confidence 225677889999985
No 81
>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A
Probab=97.44 E-value=0.00027 Score=68.70 Aligned_cols=84 Identities=18% Similarity=0.131 Sum_probs=54.0
Q ss_pred eeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccC-CCcc----chhhhccCC
Q 002970 166 RLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKS-GSRK----SLFNVFQDG 240 (862)
Q Consensus 166 KLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres-~~~K----sL~~lfp~~ 240 (862)
.+.|++.+++..|+ .. |.+.|+|++.+.++..+++.|=+. ..++...+|+.|++.++ +..| -+..++...
T Consensus 112 ~~~~~~~~~l~~l~---~~-~~~~i~Sn~~~~~~~~~~~~l~~~-~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~ 186 (229)
T 4dcc_A 112 DIPTYKLDLLLKLR---EK-YVVYLLSNTNDIHWKWVCKNAFPY-RTFKVEDYFEKTYLSYEMKMAKPEPEIFKAVTEDA 186 (229)
T ss_dssp CCCHHHHHHHHHHT---TT-SEEEEEECCCHHHHHHHHHHTSCB-TTBCHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHH
T ss_pred hccHHHHHHHHHHH---hc-CcEEEEECCChHHHHHHHhhhhhh-ccCCHHHhCCEEEeecccCCCCCCHHHHHHHHHHc
Confidence 35689999777775 34 999999999999999888776211 11344456678887632 2222 122222211
Q ss_pred CCCCcEEEEEcCCc
Q 002970 241 TCHPKMALVIDDRL 254 (862)
Q Consensus 241 ~~~~~~vVIIDDR~ 254 (862)
+..++-+|+|+|+.
T Consensus 187 g~~~~~~~~vGD~~ 200 (229)
T 4dcc_A 187 GIDPKETFFIDDSE 200 (229)
T ss_dssp TCCGGGEEEECSCH
T ss_pred CCCHHHeEEECCCH
Confidence 25678899999986
No 82
>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6
Probab=97.42 E-value=0.00058 Score=64.93 Aligned_cols=79 Identities=19% Similarity=0.226 Sum_probs=52.5
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccC-CCcc----chhhhccC
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKS-GSRK----SLFNVFQD 239 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres-~~~K----sL~~lfp~ 239 (862)
+++.|++.+++..|+ .. |.++|+|++.+.++..+++.+ +...+++.|++.++ +..| .+..++..
T Consensus 82 ~~~~~~~~~~l~~l~---~~-~~~~i~s~~~~~~~~~~l~~~-------~l~~~f~~~~~~~~~~~~KP~~~~~~~~~~~ 150 (209)
T 2hdo_A 82 IELYPGITSLFEQLP---SE-LRLGIVTSQRRNELESGMRSY-------PFMMRMAVTISADDTPKRKPDPLPLLTALEK 150 (209)
T ss_dssp CEECTTHHHHHHHSC---TT-SEEEEECSSCHHHHHHHHTTS-------GGGGGEEEEECGGGSSCCTTSSHHHHHHHHH
T ss_pred CCcCCCHHHHHHHHH---hc-CcEEEEeCCCHHHHHHHHHHc-------ChHhhccEEEecCcCCCCCCCcHHHHHHHHH
Confidence 567899999666664 44 999999999999999998874 33344567777643 2222 23333322
Q ss_pred CCCCCcEEEEEcCCc
Q 002970 240 GTCHPKMALVIDDRL 254 (862)
Q Consensus 240 ~~~~~~~vVIIDDR~ 254 (862)
....++-++.|+|+.
T Consensus 151 ~~~~~~~~i~vGD~~ 165 (209)
T 2hdo_A 151 VNVAPQNALFIGDSV 165 (209)
T ss_dssp TTCCGGGEEEEESSH
T ss_pred cCCCcccEEEECCCh
Confidence 225667788888874
No 83
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=97.42 E-value=0.00042 Score=66.75 Aligned_cols=80 Identities=13% Similarity=0.146 Sum_probs=54.9
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-Ccc----chhhhccC
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-SRK----SLFNVFQD 239 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres~-~~K----sL~~lfp~ 239 (862)
+++.|++.+++..|+ ..-|.++|+|++.+.++..+++.+ +...+|+.|++.++. ..| .+..++..
T Consensus 102 ~~~~~~~~~~l~~l~---~~g~~~~i~T~~~~~~~~~~l~~~-------gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~ 171 (231)
T 3kzx_A 102 FMLNDGAIELLDTLK---ENNITMAIVSNKNGERLRSEIHHK-------NLTHYFDSIIGSGDTGTIKPSPEPVLAALTN 171 (231)
T ss_dssp CEECTTHHHHHHHHH---HTTCEEEEEEEEEHHHHHHHHHHT-------TCGGGCSEEEEETSSSCCTTSSHHHHHHHHH
T ss_pred ceECcCHHHHHHHHH---HCCCeEEEEECCCHHHHHHHHHHC-------CchhheeeEEcccccCCCCCChHHHHHHHHH
Confidence 467799999777776 456999999999999999999884 444566788876432 112 23333322
Q ss_pred CCCCCc-EEEEEcCCc
Q 002970 240 GTCHPK-MALVIDDRL 254 (862)
Q Consensus 240 ~~~~~~-~vVIIDDR~ 254 (862)
....++ -+++|+|+.
T Consensus 172 lgi~~~~~~v~vGD~~ 187 (231)
T 3kzx_A 172 INIEPSKEVFFIGDSI 187 (231)
T ss_dssp HTCCCSTTEEEEESSH
T ss_pred cCCCcccCEEEEcCCH
Confidence 124566 788888886
No 84
>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A
Probab=97.41 E-value=0.00014 Score=70.36 Aligned_cols=47 Identities=19% Similarity=0.256 Sum_probs=38.3
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCC-Cccc
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPES-NLIN 214 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g-~lFg 214 (862)
++++|++.++++.|+ .+-|.++|+|++.+.++..+++.+.-.. .+|.
T Consensus 85 ~~~~~g~~~~l~~L~---~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~ 132 (225)
T 1nnl_A 85 PHLTPGIRELVSRLQ---ERNVQVFLISGGFRSIVEHVASKLNIPATNVFA 132 (225)
T ss_dssp CCBCTTHHHHHHHHH---HTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEE
T ss_pred CCCCccHHHHHHHHH---HCCCcEEEEeCChHHHHHHHHHHcCCCcccEEe
Confidence 467899999888776 4569999999999999999999876543 4555
No 85
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=97.38 E-value=0.00063 Score=63.59 Aligned_cols=80 Identities=19% Similarity=0.272 Sum_probs=54.5
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-----CccchhhhccC
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-----SRKSLFNVFQD 239 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres~-----~~KsL~~lfp~ 239 (862)
+++.|++.+++..|+ ..-|.++|+|++.+.++..+++.+ +...+++.+++.+.. +...+..++..
T Consensus 83 ~~~~~~~~~~l~~l~---~~g~~~~i~s~~~~~~~~~~l~~~-------~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~ 152 (216)
T 2pib_A 83 LKENPGVREALEFVK---SKRIKLALATSTPQREALERLRRL-------DLEKYFDVMVFGDQVKNGKPDPEIYLLVLER 152 (216)
T ss_dssp CCBCTTHHHHHHHHH---HTTCEEEEECSSCHHHHHHHHHHT-------TCGGGCSEEECGGGSSSCTTSTHHHHHHHHH
T ss_pred CCcCcCHHHHHHHHH---HCCCCEEEEeCCcHHhHHHHHHhc-------ChHHhcCEEeecccCCCCCcCcHHHHHHHHH
Confidence 456799999777776 455999999999999999999884 344556678776432 11123333221
Q ss_pred CCCCCcEEEEEcCCc
Q 002970 240 GTCHPKMALVIDDRL 254 (862)
Q Consensus 240 ~~~~~~~vVIIDDR~ 254 (862)
....++-+++|+|+.
T Consensus 153 ~~~~~~~~i~iGD~~ 167 (216)
T 2pib_A 153 LNVVPEKVVVFEDSK 167 (216)
T ss_dssp HTCCGGGEEEEECSH
T ss_pred cCCCCceEEEEeCcH
Confidence 125667788999985
No 86
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=97.38 E-value=0.0013 Score=62.72 Aligned_cols=80 Identities=16% Similarity=0.078 Sum_probs=55.1
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-----CccchhhhccC
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-----SRKSLFNVFQD 239 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres~-----~~KsL~~lfp~ 239 (862)
+++.|++.+++..|+ ..-|.++|+|++.+.++..+++.+ +...+++.+++.+.. +...+..++..
T Consensus 90 ~~~~~~~~~~l~~l~---~~g~~~~i~s~~~~~~~~~~l~~~-------~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~ 159 (233)
T 3s6j_A 90 IIALPGAVELLETLD---KENLKWCIATSGGIDTATINLKAL-------KLDINKINIVTRDDVSYGKPDPDLFLAAAKK 159 (233)
T ss_dssp CEECTTHHHHHHHHH---HTTCCEEEECSSCHHHHHHHHHTT-------TCCTTSSCEECGGGSSCCTTSTHHHHHHHHH
T ss_pred CccCCCHHHHHHHHH---HCCCeEEEEeCCchhhHHHHHHhc-------chhhhhheeeccccCCCCCCChHHHHHHHHH
Confidence 466799999777775 345899999999999999999874 333455677776432 12234444332
Q ss_pred CCCCCcEEEEEcCCc
Q 002970 240 GTCHPKMALVIDDRL 254 (862)
Q Consensus 240 ~~~~~~~vVIIDDR~ 254 (862)
..+.++-++.|+|+.
T Consensus 160 l~~~~~~~i~iGD~~ 174 (233)
T 3s6j_A 160 IGAPIDECLVIGDAI 174 (233)
T ss_dssp TTCCGGGEEEEESSH
T ss_pred hCCCHHHEEEEeCCH
Confidence 236678899999986
No 87
>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A
Probab=97.37 E-value=0.0016 Score=62.23 Aligned_cols=82 Identities=20% Similarity=0.216 Sum_probs=57.7
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-----CccchhhhccC
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-----SRKSLFNVFQD 239 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres~-----~~KsL~~lfp~ 239 (862)
+++.|++.+++..|+ .. |.+.|+|++.+.++..+++.+ +...+++.+++.+.. ....+..++..
T Consensus 102 ~~~~~~~~~~l~~l~---~~-~~~~i~t~~~~~~~~~~l~~~-------~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~ 170 (238)
T 3ed5_A 102 HQLIDGAFDLISNLQ---QQ-FDLYIVTNGVSHTQYKRLRDS-------GLFPFFKDIFVSEDTGFQKPMKEYFNYVFER 170 (238)
T ss_dssp CCBCTTHHHHHHHHH---TT-SEEEEEECSCHHHHHHHHHHT-------TCGGGCSEEEEGGGTTSCTTCHHHHHHHHHT
T ss_pred CCCCccHHHHHHHHH---hc-CeEEEEeCCCHHHHHHHHHHc-------ChHhhhheEEEecccCCCCCChHHHHHHHHH
Confidence 467799999777775 34 999999999999999998874 344556788876432 12234444443
Q ss_pred CC-CCCcEEEEEcCCc--ccC
Q 002970 240 GT-CHPKMALVIDDRL--KVW 257 (862)
Q Consensus 240 ~~-~~~~~vVIIDDR~--dVW 257 (862)
.+ ..++-+++|+|+. |+-
T Consensus 171 ~g~~~~~~~i~vGD~~~~Di~ 191 (238)
T 3ed5_A 171 IPQFSAEHTLIIGDSLTADIK 191 (238)
T ss_dssp STTCCGGGEEEEESCTTTTHH
T ss_pred cCCCChhHeEEECCCcHHHHH
Confidence 33 5678899999985 553
No 88
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=97.36 E-value=0.0007 Score=65.77 Aligned_cols=80 Identities=13% Similarity=0.177 Sum_probs=55.3
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-Cc----cchhhhccC
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-SR----KSLFNVFQD 239 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres~-~~----KsL~~lfp~ 239 (862)
+++.|++.+++.+|+ ..-+.++|+|++.+.++..+++.+ +...+++.+++.+.. .. ..+..++..
T Consensus 109 ~~~~~~~~~~l~~l~---~~g~~~~i~s~~~~~~~~~~l~~~-------~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~ 178 (240)
T 3sd7_A 109 NKIYENMKEILEMLY---KNGKILLVATSKPTVFAETILRYF-------DIDRYFKYIAGSNLDGTRVNKNEVIQYVLDL 178 (240)
T ss_dssp CEECTTHHHHHHHHH---HTTCEEEEEEEEEHHHHHHHHHHT-------TCGGGCSEEEEECTTSCCCCHHHHHHHHHHH
T ss_pred cccCccHHHHHHHHH---HCCCeEEEEeCCcHHHHHHHHHHc-------CcHhhEEEEEeccccCCCCCCHHHHHHHHHH
Confidence 467899999777776 345999999999999999999884 344556788877542 11 122333222
Q ss_pred CCCC-CcEEEEEcCCc
Q 002970 240 GTCH-PKMALVIDDRL 254 (862)
Q Consensus 240 ~~~~-~~~vVIIDDR~ 254 (862)
.... ++-+++|+|+.
T Consensus 179 ~g~~~~~~~i~vGD~~ 194 (240)
T 3sd7_A 179 CNVKDKDKVIMVGDRK 194 (240)
T ss_dssp HTCCCGGGEEEEESSH
T ss_pred cCCCCCCcEEEECCCH
Confidence 1256 78899999985
No 89
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=97.32 E-value=0.00036 Score=67.32 Aligned_cols=79 Identities=19% Similarity=0.108 Sum_probs=54.4
Q ss_pred eeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-----CccchhhhccCC
Q 002970 166 RLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-----SRKSLFNVFQDG 240 (862)
Q Consensus 166 KLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres~-----~~KsL~~lfp~~ 240 (862)
++.|++.+++..|+ ..-|.++|+|++.+.++..+++.+ +...+|+.|++.+.. ....+..++...
T Consensus 104 ~~~~~~~~~l~~l~---~~g~~~~i~s~~~~~~~~~~l~~~-------~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~l 173 (237)
T 4ex6_A 104 LLYPGVLEGLDRLS---AAGFRLAMATSKVEKAARAIAELT-------GLDTRLTVIAGDDSVERGKPHPDMALHVARGL 173 (237)
T ss_dssp GBCTTHHHHHHHHH---HTTEEEEEECSSCHHHHHHHHHHH-------TGGGTCSEEECTTTSSSCTTSSHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHH---hCCCcEEEEcCCChHHHHHHHHHc-------CchhheeeEEeCCCCCCCCCCHHHHHHHHHHc
Confidence 46789999777776 446999999999999999999885 334556788876542 112233332211
Q ss_pred CCCCcEEEEEcCCc
Q 002970 241 TCHPKMALVIDDRL 254 (862)
Q Consensus 241 ~~~~~~vVIIDDR~ 254 (862)
...++-+++|+|+.
T Consensus 174 g~~~~~~i~vGD~~ 187 (237)
T 4ex6_A 174 GIPPERCVVIGDGV 187 (237)
T ss_dssp TCCGGGEEEEESSH
T ss_pred CCCHHHeEEEcCCH
Confidence 25677889999986
No 90
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=97.32 E-value=0.00078 Score=65.66 Aligned_cols=80 Identities=18% Similarity=0.181 Sum_probs=53.3
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-----CccchhhhccC
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-----SRKSLFNVFQD 239 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres~-----~~KsL~~lfp~ 239 (862)
+++.|++.+++..|+ ..-|.++|+|++.+.++..+++.+. ...+++.|++.++. +...+..++..
T Consensus 82 ~~~~~~~~~~l~~l~---~~g~~~~i~s~~~~~~~~~~l~~~g-------l~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~ 151 (222)
T 2nyv_A 82 TKPYPEIPYTLEALK---SKGFKLAVVSNKLEELSKKILDILN-------LSGYFDLIVGGDTFGEKKPSPTPVLKTLEI 151 (222)
T ss_dssp CEECTTHHHHHHHHH---HTTCEEEEECSSCHHHHHHHHHHTT-------CGGGCSEEECTTSSCTTCCTTHHHHHHHHH
T ss_pred CccCCCHHHHHHHHH---HCCCeEEEEcCCCHHHHHHHHHHcC-------CHHHheEEEecCcCCCCCCChHHHHHHHHH
Confidence 577899999666665 3459999999999999999998853 33455678775431 11222222221
Q ss_pred CCCCCcEEEEEcCCc
Q 002970 240 GTCHPKMALVIDDRL 254 (862)
Q Consensus 240 ~~~~~~~vVIIDDR~ 254 (862)
....++-+++|+|+.
T Consensus 152 ~~~~~~~~~~vGD~~ 166 (222)
T 2nyv_A 152 LGEEPEKALIVGDTD 166 (222)
T ss_dssp HTCCGGGEEEEESSH
T ss_pred hCCCchhEEEECCCH
Confidence 125667788888874
No 91
>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A
Probab=97.31 E-value=0.00025 Score=67.92 Aligned_cols=84 Identities=19% Similarity=0.209 Sum_probs=56.8
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccC-CCcc----chhhhccC
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKS-GSRK----SLFNVFQD 239 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres-~~~K----sL~~lfp~ 239 (862)
+++.|++.+++..|+ .. |.+.|+|++.+.++..+++.+ +...+++.+++.+. +..| -+..++..
T Consensus 99 ~~~~~~~~~~l~~l~---~~-~~~~i~t~~~~~~~~~~l~~~-------~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~ 167 (234)
T 3u26_A 99 GELYPEVVEVLKSLK---GK-YHVGMITDSDTEQAMAFLDAL-------GIKDLFDSITTSEEAGFFKPHPRIFELALKK 167 (234)
T ss_dssp CCBCTTHHHHHHHHT---TT-SEEEEEESSCHHHHHHHHHHT-------TCGGGCSEEEEHHHHTBCTTSHHHHHHHHHH
T ss_pred CCcCcCHHHHHHHHH---hC-CcEEEEECCCHHHHHHHHHHc-------CcHHHcceeEeccccCCCCcCHHHHHHHHHH
Confidence 456699999777775 44 999999999999999998874 44456678888642 2111 13333322
Q ss_pred CCCCCcEEEEEcCCc--ccCCC
Q 002970 240 GTCHPKMALVIDDRL--KVWDD 259 (862)
Q Consensus 240 ~~~~~~~vVIIDDR~--dVW~~ 259 (862)
.+..++-+++|+|+. |+--.
T Consensus 168 ~~~~~~~~~~vGD~~~~Di~~a 189 (234)
T 3u26_A 168 AGVKGEEAVYVGDNPVKDCGGS 189 (234)
T ss_dssp HTCCGGGEEEEESCTTTTHHHH
T ss_pred cCCCchhEEEEcCCcHHHHHHH
Confidence 225678899999985 45433
No 92
>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=97.22 E-value=0.0012 Score=63.11 Aligned_cols=79 Identities=14% Similarity=0.238 Sum_probs=54.7
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-C----ccchhhhccC
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-S----RKSLFNVFQD 239 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres~-~----~KsL~~lfp~ 239 (862)
+++.|++.+++..| .+.|.+.|+|++.+.++..+++.+ +...+++.+++.+.. . ..-+..++..
T Consensus 106 ~~~~~~~~~~l~~l----~~g~~~~i~sn~~~~~~~~~l~~~-------~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~ 174 (240)
T 3qnm_A 106 SGLMPHAKEVLEYL----APQYNLYILSNGFRELQSRKMRSA-------GVDRYFKKIILSEDLGVLKPRPEIFHFALSA 174 (240)
T ss_dssp CCBSTTHHHHHHHH----TTTSEEEEEECSCHHHHHHHHHHH-------TCGGGCSEEEEGGGTTCCTTSHHHHHHHHHH
T ss_pred CCcCccHHHHHHHH----HcCCeEEEEeCCchHHHHHHHHHc-------ChHhhceeEEEeccCCCCCCCHHHHHHHHHH
Confidence 45679999955555 356999999999999999998874 444566788887532 1 1223333332
Q ss_pred CCCCCcEEEEEcCCc
Q 002970 240 GTCHPKMALVIDDRL 254 (862)
Q Consensus 240 ~~~~~~~vVIIDDR~ 254 (862)
.+..++-+|+|+|+.
T Consensus 175 lgi~~~~~~~iGD~~ 189 (240)
T 3qnm_A 175 TQSELRESLMIGDSW 189 (240)
T ss_dssp TTCCGGGEEEEESCT
T ss_pred cCCCcccEEEECCCc
Confidence 236788899999983
No 93
>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A
Probab=97.20 E-value=0.0012 Score=63.73 Aligned_cols=80 Identities=9% Similarity=-0.006 Sum_probs=53.4
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccC-CCc----cchhhhccC
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKS-GSR----KSLFNVFQD 239 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres-~~~----KsL~~lfp~ 239 (862)
+++.|++.+++..|+ ..-|.++|+|++.+.++..+++.+ +...+++.|++.+. +.. .-+..+...
T Consensus 94 ~~~~~~~~~~l~~l~---~~g~~~~i~t~~~~~~~~~~l~~~-------~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~ 163 (232)
T 1zrn_A 94 LAPFSEVPDSLRELK---RRGLKLAILSNGSPQSIDAVVSHA-------GLRDGFDHLLSVDPVQVYKPDNRVYELAEQA 163 (232)
T ss_dssp CEECTTHHHHHHHHH---HTTCEEEEEESSCHHHHHHHHHHT-------TCGGGCSEEEESGGGTCCTTSHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHH---HCCCEEEEEeCCCHHHHHHHHHhc-------ChHhhhheEEEecccCCCCCCHHHHHHHHHH
Confidence 457799999777776 456999999999999999998874 33445678887643 211 122222221
Q ss_pred CCCCCcEEEEEcCCc
Q 002970 240 GTCHPKMALVIDDRL 254 (862)
Q Consensus 240 ~~~~~~~vVIIDDR~ 254 (862)
....++-+++|+|+.
T Consensus 164 ~~~~~~~~~~iGD~~ 178 (232)
T 1zrn_A 164 LGLDRSAILFVASNA 178 (232)
T ss_dssp HTSCGGGEEEEESCH
T ss_pred cCCCcccEEEEeCCH
Confidence 114566778888875
No 94
>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A
Probab=97.18 E-value=0.0013 Score=67.07 Aligned_cols=82 Identities=13% Similarity=0.099 Sum_probs=54.4
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCCCccc----hhhhccCC
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSGSRKS----LFNVFQDG 240 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres~~~Ks----L~~lfp~~ 240 (862)
+++.|++.+++..|+ .+-|.++|+|++.+.++..+++.++- .+...+|+.|++.+.+ .|- +..++...
T Consensus 129 ~~~~~g~~~~L~~L~---~~g~~~~i~Tn~~~~~~~~~l~~~~~----~~l~~~fd~i~~~~~~-~KP~p~~~~~~~~~l 200 (261)
T 1yns_A 129 AEFFADVVPAVRKWR---EAGMKVYIYSSGSVEAQKLLFGHSTE----GDILELVDGHFDTKIG-HKVESESYRKIADSI 200 (261)
T ss_dssp BCCCTTHHHHHHHHH---HTTCEEEEECSSCHHHHHHHHHTBTT----BCCGGGCSEEECGGGC-CTTCHHHHHHHHHHH
T ss_pred cccCcCHHHHHHHHH---hCCCeEEEEeCCCHHHHHHHHHhhcc----cChHhhccEEEecCCC-CCCCHHHHHHHHHHh
Confidence 567899999777776 45689999999999999998886531 1233456678776333 322 22222111
Q ss_pred CCCCcEEEEEcCCc
Q 002970 241 TCHPKMALVIDDRL 254 (862)
Q Consensus 241 ~~~~~~vVIIDDR~ 254 (862)
.+.++-+|+|+|+.
T Consensus 201 g~~p~~~l~VgDs~ 214 (261)
T 1yns_A 201 GCSTNNILFLTDVT 214 (261)
T ss_dssp TSCGGGEEEEESCH
T ss_pred CcCcccEEEEcCCH
Confidence 25677888888873
No 95
>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A
Probab=97.17 E-value=0.00053 Score=63.93 Aligned_cols=38 Identities=18% Similarity=0.223 Sum_probs=31.1
Q ss_pred eeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhC
Q 002970 166 RLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLD 207 (862)
Q Consensus 166 KLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLD 207 (862)
+++|++.+++.+|+ ..-|.++|+|++.+.++..+ +.+.
T Consensus 79 ~~~~~~~~~l~~l~---~~g~~~~i~t~~~~~~~~~~-~~~~ 116 (201)
T 4ap9_A 79 NVSPEARELVETLR---EKGFKVVLISGSFEEVLEPF-KELG 116 (201)
T ss_dssp CCCHHHHHHHHHHH---HTTCEEEEEEEEETTTSGGG-TTTS
T ss_pred CCChhHHHHHHHHH---HCCCeEEEEeCCcHHHHHHH-HHcC
Confidence 67899999777776 45589999999999998877 7654
No 96
>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A
Probab=97.16 E-value=0.0014 Score=62.15 Aligned_cols=76 Identities=11% Similarity=0.019 Sum_probs=50.8
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccC-CCcc----chhhhccC
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKS-GSRK----SLFNVFQD 239 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres-~~~K----sL~~lfp~ 239 (862)
+++.|++.+ +..|+ .. |.++|+|++.+.++..+++.+ +...+++.|++.++ +..| -+..++..
T Consensus 73 ~~~~~~~~~-l~~l~---~~-~~~~i~t~~~~~~~~~~l~~~-------~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~ 140 (201)
T 2w43_A 73 LKAYEDTKY-LKEIS---EI-AEVYALSNGSINEVKQHLERN-------GLLRYFKGIFSAESVKEYKPSPKVYKYFLDS 140 (201)
T ss_dssp CEECGGGGG-HHHHH---HH-SEEEEEESSCHHHHHHHHHHT-------TCGGGCSEEEEGGGGTCCTTCHHHHHHHHHH
T ss_pred cccCCChHH-HHHHH---hC-CeEEEEeCcCHHHHHHHHHHC-------CcHHhCcEEEehhhcCCCCCCHHHHHHHHHh
Confidence 466799998 88886 45 999999999999999998874 34455678887643 2111 22222221
Q ss_pred CCCCCcEEEEEcCCc
Q 002970 240 GTCHPKMALVIDDRL 254 (862)
Q Consensus 240 ~~~~~~~vVIIDDR~ 254 (862)
. . ++-+++|+|+.
T Consensus 141 ~-~-~~~~~~vGD~~ 153 (201)
T 2w43_A 141 I-G-AKEAFLVSSNA 153 (201)
T ss_dssp H-T-CSCCEEEESCH
T ss_pred c-C-CCcEEEEeCCH
Confidence 1 1 45577788875
No 97
>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20
Probab=97.15 E-value=0.0011 Score=65.49 Aligned_cols=37 Identities=8% Similarity=0.339 Sum_probs=31.9
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHH
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWR 204 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~r 204 (862)
++++|++.+++..|+ ..-|.++|.|++.+.++..+++
T Consensus 76 ~~~~pg~~~~l~~L~---~~g~~~~ivS~~~~~~~~~~l~ 112 (236)
T 2fea_A 76 AKIREGFREFVAFIN---EHEIPFYVISGGMDFFVYPLLE 112 (236)
T ss_dssp CCBCTTHHHHHHHHH---HHTCCEEEEEEEEHHHHHHHHT
T ss_pred CCCCccHHHHHHHHH---hCCCeEEEEeCCcHHHHHHHHh
Confidence 568899999777776 4569999999999999998887
No 98
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=97.14 E-value=0.001 Score=63.51 Aligned_cols=80 Identities=18% Similarity=0.152 Sum_probs=54.6
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-Cc----cchhhhccC
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-SR----KSLFNVFQD 239 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres~-~~----KsL~~lfp~ 239 (862)
+++.|++.+++..|+ ..-|.++|+|++.+.++..+++.+ +...+++.+++.+.. .. ..+..++..
T Consensus 85 ~~~~~~~~~~l~~l~---~~g~~~~i~t~~~~~~~~~~l~~~-------~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~ 154 (226)
T 3mc1_A 85 NKVYDGIEALLSSLK---DYGFHLVVATSKPTVFSKQILEHF-------KLAFYFDAIVGSSLDGKLSTKEDVIRYAMES 154 (226)
T ss_dssp CCBCTTHHHHHHHHH---HHTCEEEEEEEEEHHHHHHHHHHT-------TCGGGCSEEEEECTTSSSCSHHHHHHHHHHH
T ss_pred CccCcCHHHHHHHHH---HCCCeEEEEeCCCHHHHHHHHHHh-------CCHhheeeeeccCCCCCCCCCHHHHHHHHHH
Confidence 456799999777775 345999999999999999999884 344566788887542 11 122222221
Q ss_pred CCCCCcEEEEEcCCc
Q 002970 240 GTCHPKMALVIDDRL 254 (862)
Q Consensus 240 ~~~~~~~vVIIDDR~ 254 (862)
....++-+++|+|+.
T Consensus 155 lgi~~~~~i~iGD~~ 169 (226)
T 3mc1_A 155 LNIKSDDAIMIGDRE 169 (226)
T ss_dssp HTCCGGGEEEEESSH
T ss_pred hCcCcccEEEECCCH
Confidence 125667889999985
No 99
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=97.13 E-value=0.0015 Score=64.61 Aligned_cols=80 Identities=16% Similarity=0.164 Sum_probs=53.8
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-Ccc----chhhhccC
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-SRK----SLFNVFQD 239 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres~-~~K----sL~~lfp~ 239 (862)
+++.|++.+++..|+ .+-|.+.|+|++.+.++..+++.+ +...+++.|++.+.. ..| .+..++..
T Consensus 113 ~~~~~~~~~~l~~l~---~~g~~~~i~t~~~~~~~~~~l~~~-------gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~ 182 (243)
T 2hsz_A 113 SRLYPNVKETLEALK---AQGYILAVVTNKPTKHVQPILTAF-------GIDHLFSEMLGGQSLPEIKPHPAPFYYLCGK 182 (243)
T ss_dssp CEECTTHHHHHHHHH---HTTCEEEEECSSCHHHHHHHHHHT-------TCGGGCSEEECTTTSSSCTTSSHHHHHHHHH
T ss_pred CccCCCHHHHHHHHH---HCCCEEEEEECCcHHHHHHHHHHc-------CchheEEEEEecccCCCCCcCHHHHHHHHHH
Confidence 477899999777775 456999999999999999999885 333455678776432 222 22222221
Q ss_pred CCCCCcEEEEEcCCc
Q 002970 240 GTCHPKMALVIDDRL 254 (862)
Q Consensus 240 ~~~~~~~vVIIDDR~ 254 (862)
....++-+++|+|+.
T Consensus 183 ~~~~~~~~~~vGD~~ 197 (243)
T 2hsz_A 183 FGLYPKQILFVGDSQ 197 (243)
T ss_dssp HTCCGGGEEEEESSH
T ss_pred hCcChhhEEEEcCCH
Confidence 124567788888874
No 100
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=97.13 E-value=0.0013 Score=62.81 Aligned_cols=80 Identities=8% Similarity=-0.061 Sum_probs=53.9
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-Ccc----chhhhccC
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-SRK----SLFNVFQD 239 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres~-~~K----sL~~lfp~ 239 (862)
+++.|++.+++..|+ ..-|.++|+|++.+.++..+++.+ +...+++.|++.+.. ..| .+..++..
T Consensus 95 ~~~~~~~~~~l~~l~---~~g~~~~i~s~~~~~~~~~~l~~~-------~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~ 164 (230)
T 3um9_A 95 LTPFADVPQALQQLR---AAGLKTAILSNGSRHSIRQVVGNS-------GLTNSFDHLISVDEVRLFKPHQKVYELAMDT 164 (230)
T ss_dssp CCBCTTHHHHHHHHH---HTTCEEEEEESSCHHHHHHHHHHH-------TCGGGCSEEEEGGGTTCCTTCHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHH---hCCCeEEEEeCCCHHHHHHHHHHC-------CChhhcceeEehhhcccCCCChHHHHHHHHH
Confidence 456799999777775 445999999999999999998875 334456788887432 112 22333221
Q ss_pred CCCCCcEEEEEcCCc
Q 002970 240 GTCHPKMALVIDDRL 254 (862)
Q Consensus 240 ~~~~~~~vVIIDDR~ 254 (862)
....++-+++|+|+.
T Consensus 165 ~~~~~~~~~~iGD~~ 179 (230)
T 3um9_A 165 LHLGESEILFVSCNS 179 (230)
T ss_dssp HTCCGGGEEEEESCH
T ss_pred hCCCcccEEEEeCCH
Confidence 125667788889885
No 101
>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}
Probab=97.12 E-value=0.0029 Score=61.35 Aligned_cols=88 Identities=10% Similarity=0.026 Sum_probs=51.6
Q ss_pred EEeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccC-CCcc----chhhhcc
Q 002970 164 LVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKS-GSRK----SLFNVFQ 238 (862)
Q Consensus 164 ~vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres-~~~K----sL~~lfp 238 (862)
.+++.|++.+++..|+ ..-|.++|.|++.+ ++..+++.+ +...+|+.|++.++ +..| -+..++.
T Consensus 93 ~~~~~~~~~~~l~~l~---~~g~~~~i~Tn~~~-~~~~~l~~~-------gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~ 161 (220)
T 2zg6_A 93 EAFLYDDTLEFLEGLK---SNGYKLALVSNASP-RVKTLLEKF-------DLKKYFDALALSYEIKAVKPNPKIFGFALA 161 (220)
T ss_dssp EEEECTTHHHHHHHHH---TTTCEEEECCSCHH-HHHHHHHHH-------TCGGGCSEEC-----------CCHHHHHHH
T ss_pred CceECcCHHHHHHHHH---HCCCEEEEEeCCcH-HHHHHHHhc-------CcHhHeeEEEeccccCCCCCCHHHHHHHHH
Confidence 4788999999666665 44699999999987 577777764 44455677777643 2112 2222222
Q ss_pred CCCCCCcEEEEEcCCc--ccCCCCCCCCeE
Q 002970 239 DGTCHPKMALVIDDRL--KVWDDKDQPRVH 266 (862)
Q Consensus 239 ~~~~~~~~vVIIDDR~--dVW~~~~~~~v~ 266 (862)
...+.+ ++|+|+. |+-.... -.+.
T Consensus 162 ~~~~~~---~~vgD~~~~Di~~a~~-aG~~ 187 (220)
T 2zg6_A 162 KVGYPA---VHVGDIYELDYIGAKR-SYVD 187 (220)
T ss_dssp HHCSSE---EEEESSCCCCCCCSSS-CSEE
T ss_pred HcCCCe---EEEcCCchHhHHHHHH-CCCe
Confidence 111333 8888886 5766553 3443
No 102
>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}
Probab=97.11 E-value=0.00039 Score=73.83 Aligned_cols=40 Identities=10% Similarity=0.133 Sum_probs=34.7
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhC
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLD 207 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLD 207 (862)
++++|++.+++++|+ ..-|.++|.|++.+.++..+++.+.
T Consensus 178 ~~l~pg~~e~L~~Lk---~~G~~v~IvSn~~~~~~~~~l~~lg 217 (317)
T 4eze_A 178 MTLSPGLLTILPVIK---AKGFKTAIISGGLDIFTQRLKARYQ 217 (317)
T ss_dssp CCBCTTHHHHHHHHH---HTTCEEEEEEEEEHHHHHHHHHHHT
T ss_pred CEECcCHHHHHHHHH---hCCCEEEEEeCccHHHHHHHHHHcC
Confidence 358899999888886 4569999999999999999999864
No 103
>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*
Probab=97.09 E-value=0.0017 Score=63.16 Aligned_cols=80 Identities=8% Similarity=0.040 Sum_probs=53.4
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-Cc----cchhhhccC
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-SR----KSLFNVFQD 239 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres~-~~----KsL~~lfp~ 239 (862)
+++.|++.+++..|+ ..-|.++|+|++.+.++..+++.+ +...+++.|++.+.. .. .-+..++..
T Consensus 104 ~~~~~~~~~~l~~l~---~~g~~~~i~s~~~~~~~~~~l~~~-------~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~ 173 (240)
T 2no4_A 104 LSAYPDAAETLEKLK---SAGYIVAILSNGNDEMLQAALKAS-------KLDRVLDSCLSADDLKIYKPDPRIYQFACDR 173 (240)
T ss_dssp CCBCTTHHHHHHHHH---HTTCEEEEEESSCHHHHHHHHHHT-------TCGGGCSEEEEGGGTTCCTTSHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHH---HCCCEEEEEcCCCHHHHHHHHHhc-------CcHHHcCEEEEccccCCCCCCHHHHHHHHHH
Confidence 356799999777775 456999999999999999998874 334556788876432 11 123322221
Q ss_pred CCCCCcEEEEEcCCc
Q 002970 240 GTCHPKMALVIDDRL 254 (862)
Q Consensus 240 ~~~~~~~vVIIDDR~ 254 (862)
....++-+++|+|+.
T Consensus 174 ~~~~~~~~~~iGD~~ 188 (240)
T 2no4_A 174 LGVNPNEVCFVSSNA 188 (240)
T ss_dssp HTCCGGGEEEEESCH
T ss_pred cCCCcccEEEEeCCH
Confidence 125667788888875
No 104
>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}
Probab=97.07 E-value=0.0015 Score=64.13 Aligned_cols=79 Identities=13% Similarity=0.117 Sum_probs=53.1
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCCCccchhhhccCCCCCC
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSGSRKSLFNVFQDGTCHP 244 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres~~~KsL~~lfp~~~~~~ 244 (862)
+++.|++.+++.+|+ ..|.+.|+|++.+.++..+++.+ +...+|+.|++....+...+..++......+
T Consensus 111 ~~~~~~~~~~l~~l~----~~~~~~i~t~~~~~~~~~~l~~~-------~l~~~f~~i~~~~kp~~~~~~~~~~~l~~~~ 179 (251)
T 2pke_A 111 VEVIAGVREAVAAIA----ADYAVVLITKGDLFHQEQKIEQS-------GLSDLFPRIEVVSEKDPQTYARVLSEFDLPA 179 (251)
T ss_dssp CCBCTTHHHHHHHHH----TTSEEEEEEESCHHHHHHHHHHH-------SGGGTCCCEEEESCCSHHHHHHHHHHHTCCG
T ss_pred CCcCccHHHHHHHHH----CCCEEEEEeCCCHHHHHHHHHHc-------CcHHhCceeeeeCCCCHHHHHHHHHHhCcCc
Confidence 356799999777763 44899999999999999988874 3344556777753322222333322112567
Q ss_pred cEEEEEcCCc
Q 002970 245 KMALVIDDRL 254 (862)
Q Consensus 245 ~~vVIIDDR~ 254 (862)
+-+|+|+|+.
T Consensus 180 ~~~i~iGD~~ 189 (251)
T 2pke_A 180 ERFVMIGNSL 189 (251)
T ss_dssp GGEEEEESCC
T ss_pred hhEEEECCCc
Confidence 8899999986
No 105
>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}
Probab=97.05 E-value=0.00042 Score=66.52 Aligned_cols=80 Identities=9% Similarity=-0.025 Sum_probs=54.0
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-Ccc----chhhhccC
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-SRK----SLFNVFQD 239 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres~-~~K----sL~~lfp~ 239 (862)
+++.|++.+++..|+ ..-|.++|+|++.+.++..+++.+ +...+++.|++.+.. ..| -+..++..
T Consensus 98 ~~~~~~~~~~l~~l~---~~g~~~~i~t~~~~~~~~~~l~~~-------~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~ 167 (233)
T 3umb_A 98 LSAFPENVPVLRQLR---EMGLPLGILSNGNPQMLEIAVKSA-------GMSGLFDHVLSVDAVRLYKTAPAAYALAPRA 167 (233)
T ss_dssp CEECTTHHHHHHHHH---TTTCCEEEEESSCHHHHHHHHHTT-------TCTTTCSEEEEGGGTTCCTTSHHHHTHHHHH
T ss_pred CCCCCCHHHHHHHHH---hCCCcEEEEeCCCHHHHHHHHHHC-------CcHhhcCEEEEecccCCCCcCHHHHHHHHHH
Confidence 567799999777775 445999999999999999998874 334456788887532 112 23332221
Q ss_pred CCCCCcEEEEEcCCc
Q 002970 240 GTCHPKMALVIDDRL 254 (862)
Q Consensus 240 ~~~~~~~vVIIDDR~ 254 (862)
...+++-+++|+|+.
T Consensus 168 ~~~~~~~~~~vGD~~ 182 (233)
T 3umb_A 168 FGVPAAQILFVSSNG 182 (233)
T ss_dssp HTSCGGGEEEEESCH
T ss_pred hCCCcccEEEEeCCH
Confidence 125667788888874
No 106
>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A
Probab=97.05 E-value=0.00025 Score=69.90 Aligned_cols=80 Identities=19% Similarity=0.077 Sum_probs=54.5
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCe-EEeccC-C-Ccc----chhhhc
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDR-IVCVKS-G-SRK----SLFNVF 237 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~R-Iisres-~-~~K----sL~~lf 237 (862)
+++.|++.+++..|+ ..-|.++|+|++.+.++..+++.++ ...+++. |++.+. + ..| .+..++
T Consensus 109 ~~~~~~~~~~l~~l~---~~g~~~~i~s~~~~~~~~~~l~~~~-------l~~~f~~~i~~~~~~~~~~Kp~~~~~~~~~ 178 (259)
T 4eek_A 109 VTAIEGAAETLRALR---AAGVPFAIGSNSERGRLHLKLRVAG-------LTELAGEHIYDPSWVGGRGKPHPDLYTFAA 178 (259)
T ss_dssp CEECTTHHHHHHHHH---HHTCCEEEECSSCHHHHHHHHHHTT-------CHHHHCSCEECGGGGTTCCTTSSHHHHHHH
T ss_pred CCcCccHHHHHHHHH---HCCCeEEEEeCCCHHHHHHHHHhcC-------hHhhccceEEeHhhcCcCCCCChHHHHHHH
Confidence 567799999777776 4468999999999999999998753 3334445 776532 2 222 233333
Q ss_pred cCCCCCCcEEEEEcCCc
Q 002970 238 QDGTCHPKMALVIDDRL 254 (862)
Q Consensus 238 p~~~~~~~~vVIIDDR~ 254 (862)
......++-+++|+|+.
T Consensus 179 ~~lgi~~~~~i~iGD~~ 195 (259)
T 4eek_A 179 QQLGILPERCVVIEDSV 195 (259)
T ss_dssp HHTTCCGGGEEEEESSH
T ss_pred HHcCCCHHHEEEEcCCH
Confidence 32235678899999986
No 107
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=97.05 E-value=0.0016 Score=63.08 Aligned_cols=45 Identities=13% Similarity=-0.048 Sum_probs=36.7
Q ss_pred eeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccc
Q 002970 166 RLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLIN 214 (862)
Q Consensus 166 KLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg 214 (862)
+++||+.+++..|+ ..-+.++|.|++.+.++..+++.+.=+ .+|+
T Consensus 92 ~~~~g~~~~l~~l~---~~g~~~~ivS~~~~~~~~~~~~~~g~~-~~~~ 136 (232)
T 3fvv_A 92 SLTVQAVDVVRGHL---AAGDLCALVTATNSFVTAPIARAFGVQ-HLIA 136 (232)
T ss_dssp GCCHHHHHHHHHHH---HTTCEEEEEESSCHHHHHHHHHHTTCC-EEEE
T ss_pred hcCHHHHHHHHHHH---HCCCEEEEEeCCCHHHHHHHHHHcCCC-EEEE
Confidence 36899999777776 456999999999999999999997644 3455
No 108
>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=97.04 E-value=0.0023 Score=59.16 Aligned_cols=79 Identities=15% Similarity=0.195 Sum_probs=51.3
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccC-CCcc----chhhhccC
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKS-GSRK----SLFNVFQD 239 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres-~~~K----sL~~lfp~ 239 (862)
+.+.|++.+++.+|+ ..-+.+.|+|++.+.+.. +++.++ ...+++.+++.++ +..| .+..+...
T Consensus 84 ~~~~~~~~~~l~~l~---~~g~~~~i~s~~~~~~~~-~~~~~~-------~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~ 152 (207)
T 2go7_A 84 VVLMPGAREVLAWAD---ESGIQQFIYTHKGNNAFT-ILKDLG-------VESYFTEILTSQSGFVRKPSPEAATYLLDK 152 (207)
T ss_dssp CEECTTHHHHHHHHH---HTTCEEEEECSSCTHHHH-HHHHHT-------CGGGEEEEECGGGCCCCTTSSHHHHHHHHH
T ss_pred ceeCcCHHHHHHHHH---HCCCeEEEEeCCchHHHH-HHHHcC-------chhheeeEEecCcCCCCCCCcHHHHHHHHH
Confidence 456799999777776 445899999999999998 887753 2334456776543 2112 23333221
Q ss_pred CCCCCcEEEEEcCCc
Q 002970 240 GTCHPKMALVIDDRL 254 (862)
Q Consensus 240 ~~~~~~~vVIIDDR~ 254 (862)
....++-++.|+|+.
T Consensus 153 ~~i~~~~~~~iGD~~ 167 (207)
T 2go7_A 153 YQLNSDNTYYIGDRT 167 (207)
T ss_dssp HTCCGGGEEEEESSH
T ss_pred hCCCcccEEEECCCH
Confidence 125667788888874
No 109
>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}
Probab=97.02 E-value=0.0015 Score=61.29 Aligned_cols=77 Identities=13% Similarity=0.123 Sum_probs=52.6
Q ss_pred eCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCC-CCccccccccCeEEeccC-----------C---Ccc
Q 002970 167 LRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPE-SNLINTKELLDRIVCVKS-----------G---SRK 231 (862)
Q Consensus 167 LRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~-g~lFg~~~l~~RIisres-----------~---~~K 231 (862)
++|++.+++.+|+ ..-|.++|+|++.+.++..+++.+.=. ..+|. ..++...+ . ..+
T Consensus 83 ~~~~~~~~l~~l~---~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (219)
T 3kd3_A 83 LTDGIKELVQDLK---NKGFEIWIFSGGLSESIQPFADYLNIPRENIFA-----VETIWNSDGSFKELDNSNGACDSKLS 154 (219)
T ss_dssp BCTTHHHHHHHHH---HTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEE-----EEEEECTTSBEEEEECTTSTTTCHHH
T ss_pred CChhHHHHHHHHH---HCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEE-----eeeeecCCCceeccCCCCCCcccHHH
Confidence 6799999888886 456999999999999999999987643 23443 22222111 1 124
Q ss_pred chhhhccCCCCCCcEEEEEcCCc
Q 002970 232 SLFNVFQDGTCHPKMALVIDDRL 254 (862)
Q Consensus 232 sL~~lfp~~~~~~~~vVIIDDR~ 254 (862)
.|...+. ..++-+++|+|+.
T Consensus 155 ~l~~~~~---~~~~~~~~vGD~~ 174 (219)
T 3kd3_A 155 AFDKAKG---LIDGEVIAIGDGY 174 (219)
T ss_dssp HHHHHGG---GCCSEEEEEESSH
T ss_pred HHHHHhC---CCCCCEEEEECCH
Confidence 4555554 5677899999985
No 110
>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2
Probab=97.01 E-value=0.00031 Score=66.30 Aligned_cols=83 Identities=19% Similarity=0.187 Sum_probs=51.5
Q ss_pred EEeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccC-C----Cccchhhhcc
Q 002970 164 LVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKS-G----SRKSLFNVFQ 238 (862)
Q Consensus 164 ~vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres-~----~~KsL~~lfp 238 (862)
++++.|++.+++..|+ ..-+.++|+|++.+.++..+++.+ ++...+++.|++.++ + +..-+..++.
T Consensus 89 ~~~~~~~~~~~l~~l~---~~g~~~~i~t~~~~~~~~~~~~~~------~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~ 159 (206)
T 2b0c_A 89 FVALRPEVIAIMHKLR---EQGHRVVVLSNTNRLHTTFWPEEY------PEIRDAADHIYLSQDLGMRKPEARIYQHVLQ 159 (206)
T ss_dssp EEEECHHHHHHHHHHH---HTTCEEEEEECCCCCTTSCCGGGC------HHHHHHCSEEEEHHHHTCCTTCHHHHHHHHH
T ss_pred hcccCccHHHHHHHHH---HCCCeEEEEECCChHHHHHHHHhc------cChhhheeeEEEecccCCCCCCHHHHHHHHH
Confidence 4678899999777775 456999999999988765544331 233344567777532 2 1112333332
Q ss_pred CCCCCCcEEEEEcCCcc
Q 002970 239 DGTCHPKMALVIDDRLK 255 (862)
Q Consensus 239 ~~~~~~~~vVIIDDR~d 255 (862)
.....++-+++|+|+..
T Consensus 160 ~~~~~~~~~~~vgD~~~ 176 (206)
T 2b0c_A 160 AEGFSPSDTVFFDDNAD 176 (206)
T ss_dssp HHTCCGGGEEEEESCHH
T ss_pred HcCCCHHHeEEeCCCHH
Confidence 21256677888898753
No 111
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=97.01 E-value=0.0019 Score=63.51 Aligned_cols=79 Identities=18% Similarity=0.075 Sum_probs=53.0
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-----CccchhhhccC
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-----SRKSLFNVFQD 239 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres~-----~~KsL~~lfp~ 239 (862)
+++.|++.+++..|+ .+-|.+.|+|++.+.++..+++.+.-. +| +.|++.+.. +..-+..+...
T Consensus 109 ~~~~~g~~~~l~~l~---~~g~~~~i~t~~~~~~~~~~l~~~~l~--~f------~~~~~~~~~~~~Kp~p~~~~~~~~~ 177 (240)
T 2hi0_A 109 TGPFPGILDLMKNLR---QKGVKLAVVSNKPNEAVQVLVEELFPG--SF------DFALGEKSGIRRKPAPDMTSECVKV 177 (240)
T ss_dssp CEECTTHHHHHHHHH---HTTCEEEEEEEEEHHHHHHHHHHHSTT--TC------SEEEEECTTSCCTTSSHHHHHHHHH
T ss_pred CCcCCCHHHHHHHHH---HCCCEEEEEeCCCHHHHHHHHHHcCCc--ce------eEEEecCCCCCCCCCHHHHHHHHHH
Confidence 467799999777776 456899999999999999999886532 34 467776432 11122222221
Q ss_pred CCCCCcEEEEEcCCc
Q 002970 240 GTCHPKMALVIDDRL 254 (862)
Q Consensus 240 ~~~~~~~vVIIDDR~ 254 (862)
....++-+|+|+|+.
T Consensus 178 l~~~~~~~~~vGDs~ 192 (240)
T 2hi0_A 178 LGVPRDKCVYIGDSE 192 (240)
T ss_dssp HTCCGGGEEEEESSH
T ss_pred cCCCHHHeEEEcCCH
Confidence 115677889999974
No 112
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=97.01 E-value=0.0018 Score=62.08 Aligned_cols=80 Identities=14% Similarity=0.045 Sum_probs=51.9
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCc-HHHHHHHHHhhCCCCCccccccccCeEEeccCCCccchhhhccCCCCC
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAE-RDYALEMWRLLDPESNLINTKELLDRIVCVKSGSRKSLFNVFQDGTCH 243 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~-R~YA~~I~rlLDP~g~lFg~~~l~~RIisres~~~KsL~~lfp~~~~~ 243 (862)
+++.|++.+++..|+ ++-+.+.|+|++. +.++..+++.++- ..+|+.+++........+..++......
T Consensus 67 ~~~~~g~~e~L~~L~---~~G~~v~ivT~~~~~~~~~~~l~~~gl-------~~~f~~~~~~~~~k~~~~~~~~~~~~~~ 136 (187)
T 2wm8_A 67 VRLYPEVPEVLKRLQ---SLGVPGAAASRTSEIEGANQLLELFDL-------FRYFVHREIYPGSKITHFERLQQKTGIP 136 (187)
T ss_dssp ECCCTTHHHHHHHHH---HHTCCEEEEECCSCHHHHHHHHHHTTC-------TTTEEEEEESSSCHHHHHHHHHHHHCCC
T ss_pred cCcchhHHHHHHHHH---HCCceEEEEeCCCChHHHHHHHHHcCc-------HhhcceeEEEeCchHHHHHHHHHHcCCC
Confidence 567899999777775 4458999999999 8999999998543 2344455443322222233332211256
Q ss_pred CcEEEEEcCCc
Q 002970 244 PKMALVIDDRL 254 (862)
Q Consensus 244 ~~~vVIIDDR~ 254 (862)
++-+++|||+.
T Consensus 137 ~~~~~~igD~~ 147 (187)
T 2wm8_A 137 FSQMIFFDDER 147 (187)
T ss_dssp GGGEEEEESCH
T ss_pred hHHEEEEeCCc
Confidence 67788888874
No 113
>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}
Probab=96.98 E-value=0.0016 Score=63.90 Aligned_cols=81 Identities=16% Similarity=0.048 Sum_probs=51.3
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEecc--CC-Cc----cchhhhc
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVK--SG-SR----KSLFNVF 237 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisre--s~-~~----KsL~~lf 237 (862)
+++.|++.+++..|+ ..-|.++|+|++.+.++...+.- .++...+|+.|++.+ .- .. .-+..++
T Consensus 111 ~~~~~~~~~~l~~l~---~~g~~~~i~sn~~~~~~~~~l~~------~~~l~~~f~~~~~~~~~~~~~~Kp~~~~~~~~~ 181 (250)
T 3l5k_A 111 AALMPGAEKLIIHLR---KHGIPFALATSSRSASFDMKTSR------HKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACA 181 (250)
T ss_dssp CCBCTTHHHHHHHHH---HTTCCEEEECSCCHHHHHHHTTT------CHHHHTTSSCEECTTCTTCCSCTTSTHHHHHHH
T ss_pred CCCCCCHHHHHHHHH---hCCCcEEEEeCCCHHHHHHHHHh------ccCHHhheeeEEecchhhccCCCCChHHHHHHH
Confidence 456799999777776 44589999999998877664421 123334556777765 32 11 2344444
Q ss_pred cCCCCCC--cEEEEEcCCc
Q 002970 238 QDGTCHP--KMALVIDDRL 254 (862)
Q Consensus 238 p~~~~~~--~~vVIIDDR~ 254 (862)
......+ +-+++|+|+.
T Consensus 182 ~~lgi~~~~~~~i~iGD~~ 200 (250)
T 3l5k_A 182 KRFSPPPAMEKCLVFEDAP 200 (250)
T ss_dssp HTSSSCCCGGGEEEEESSH
T ss_pred HHcCCCCCcceEEEEeCCH
Confidence 3323555 7889999985
No 114
>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}
Probab=96.96 E-value=0.0009 Score=63.75 Aligned_cols=78 Identities=15% Similarity=0.132 Sum_probs=51.4
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccC-CCc--------cchhh
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKS-GSR--------KSLFN 235 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres-~~~--------KsL~~ 235 (862)
+++.|++.+++..|+ + .|.+.|+|++.+.++..+++.|+ . .|+.|++.++ +.. +.|+.
T Consensus 98 ~~~~~~~~~~l~~l~-~---~~~~~i~tn~~~~~~~~~l~~l~---~------~fd~i~~~~~~~~~KP~~~~~~~~l~~ 164 (240)
T 3smv_A 98 WPAFPDTVEALQYLK-K---HYKLVILSNIDRNEFKLSNAKLG---V------EFDHIITAQDVGSYKPNPNNFTYMIDA 164 (240)
T ss_dssp CCBCTTHHHHHHHHH-H---HSEEEEEESSCHHHHHHHHTTTC---S------CCSEEEEHHHHTSCTTSHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHH-h---CCeEEEEeCCChhHHHHHHHhcC---C------ccCEEEEccccCCCCCCHHHHHHHHHH
Confidence 356799999777776 2 49999999999999998887643 2 3457777632 211 12211
Q ss_pred hccCCCCCCcEEEEEcCCc--cc
Q 002970 236 VFQDGTCHPKMALVIDDRL--KV 256 (862)
Q Consensus 236 lfp~~~~~~~~vVIIDDR~--dV 256 (862)
+....+.++-+|+|+|+. |+
T Consensus 165 -~~~lgi~~~~~~~vGD~~~~Di 186 (240)
T 3smv_A 165 -LAKAGIEKKDILHTAESLYHDH 186 (240)
T ss_dssp -HHHTTCCGGGEEEEESCTTTTH
T ss_pred -HHhcCCCchhEEEECCCchhhh
Confidence 211125678889998883 55
No 115
>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*
Probab=96.95 E-value=0.0027 Score=63.78 Aligned_cols=80 Identities=18% Similarity=0.202 Sum_probs=53.4
Q ss_pred EeeCcChHHHHHHHhhhccccE--EEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccC-----C----Cccch
Q 002970 165 VRLRPAWEDLRSYLTARGRKRF--EVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKS-----G----SRKSL 233 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~F--El~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres-----~----~~KsL 233 (862)
+++.|++.+++..|+ ..-| .+.|+|++.+.++..+++.+. ...+++.|++.+. + ....+
T Consensus 141 ~~~~p~~~~~L~~L~---~~g~~~~l~i~Tn~~~~~~~~~l~~~g-------l~~~fd~v~~~~~~~~~~~~~Kp~~~~~ 210 (282)
T 3nuq_A 141 LKPDIPLRNMLLRLR---QSGKIDKLWLFTNAYKNHAIRCLRLLG-------IADLFDGLTYCDYSRTDTLVCKPHVKAF 210 (282)
T ss_dssp CCCCHHHHHHHHHHH---HSSSCSEEEEECSSCHHHHHHHHHHHT-------CTTSCSEEECCCCSSCSSCCCTTSHHHH
T ss_pred cCcChhHHHHHHHHH---hCCCCceEEEEECCChHHHHHHHHhCC-------cccccceEEEeccCCCcccCCCcCHHHH
Confidence 456799999777775 4567 999999999999999998853 3345567775432 1 11223
Q ss_pred hhhccCCCCCC-cEEEEEcCCc
Q 002970 234 FNVFQDGTCHP-KMALVIDDRL 254 (862)
Q Consensus 234 ~~lfp~~~~~~-~~vVIIDDR~ 254 (862)
..++...+..+ +-+|+|+|+.
T Consensus 211 ~~~~~~lgi~~~~~~i~vGD~~ 232 (282)
T 3nuq_A 211 EKAMKESGLARYENAYFIDDSG 232 (282)
T ss_dssp HHHHHHHTCCCGGGEEEEESCH
T ss_pred HHHHHHcCCCCcccEEEEcCCH
Confidence 33332222566 7899999975
No 116
>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0
Probab=96.94 E-value=0.0042 Score=60.97 Aligned_cols=81 Identities=14% Similarity=0.064 Sum_probs=53.4
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-----CccchhhhccC
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-----SRKSLFNVFQD 239 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres~-----~~KsL~~lfp~ 239 (862)
+++.|++.+++..|+ ..-|.+.|+|++.+.++..+++.+.-.+.+ ++.|++.+.. +...+..++..
T Consensus 110 ~~~~~~~~~~l~~l~---~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~------~~~~~~~~~~~~~kp~~~~~~~~~~~ 180 (277)
T 3iru_A 110 SQLIPGWKEVFDKLI---AQGIKVGGNTGYGPGMMAPALIAAKEQGYT------PASTVFATDVVRGRPFPDMALKVALE 180 (277)
T ss_dssp CCBCTTHHHHHHHHH---HTTCEEEEECSSCHHHHHHHHHHHHHTTCC------CSEEECGGGSSSCTTSSHHHHHHHHH
T ss_pred CccCcCHHHHHHHHH---HcCCeEEEEeCCchHHHHHHHHhcCcccCC------CceEecHHhcCCCCCCHHHHHHHHHH
Confidence 456799999777775 455899999999999999998874322211 4677776432 11223333322
Q ss_pred CCCCC-cEEEEEcCCc
Q 002970 240 GTCHP-KMALVIDDRL 254 (862)
Q Consensus 240 ~~~~~-~~vVIIDDR~ 254 (862)
.+..+ +-+++|+|+.
T Consensus 181 lgi~~~~~~i~vGD~~ 196 (277)
T 3iru_A 181 LEVGHVNGCIKVDDTL 196 (277)
T ss_dssp HTCSCGGGEEEEESSH
T ss_pred cCCCCCccEEEEcCCH
Confidence 22567 7889999985
No 117
>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}
Probab=96.94 E-value=0.00026 Score=69.48 Aligned_cols=78 Identities=12% Similarity=0.070 Sum_probs=50.6
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCCCccchhhhccCCCCCC
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSGSRKSLFNVFQDGTCHP 244 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres~~~KsL~~lfp~~~~~~ 244 (862)
+++.|++.+++..|+ .+. .+.|.|++.+.++..+++.++=. .+|. .+++.......-|..+.. + ..+
T Consensus 95 ~~~~~g~~~~l~~l~---~~g-~~~i~Tn~~~~~~~~~l~~~gl~-~~f~------~~~~~~~~K~~~~~~~~~-~-~~~ 161 (231)
T 2p11_A 95 SRVYPGALNALRHLG---ARG-PTVILSDGDVVFQPRKIARSGLW-DEVE------GRVLIYIHKELMLDQVME-C-YPA 161 (231)
T ss_dssp GGBCTTHHHHHHHHH---TTS-CEEEEEECCSSHHHHHHHHTTHH-HHTT------TCEEEESSGGGCHHHHHH-H-SCC
T ss_pred CCcCccHHHHHHHHH---hCC-CEEEEeCCCHHHHHHHHHHcCcH-HhcC------eeEEecCChHHHHHHHHh-c-CCC
Confidence 467899999888876 223 68999999999999999875422 2343 333321111223433333 1 567
Q ss_pred cEEEEEcCCcc
Q 002970 245 KMALVIDDRLK 255 (862)
Q Consensus 245 ~~vVIIDDR~d 255 (862)
+-+++|+|+..
T Consensus 162 ~~~~~vgDs~~ 172 (231)
T 2p11_A 162 RHYVMVDDKLR 172 (231)
T ss_dssp SEEEEECSCHH
T ss_pred ceEEEEcCccc
Confidence 88999999973
No 118
>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}
Probab=96.92 E-value=0.0015 Score=65.40 Aligned_cols=85 Identities=14% Similarity=0.121 Sum_probs=54.8
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccC-CCcc----chhhhccC
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKS-GSRK----SLFNVFQD 239 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres-~~~K----sL~~lfp~ 239 (862)
+++.|++.+++..|+ ..-|.+.|+|++.+. +..+++.+ +...+|+.|++.+. +..| -+..++..
T Consensus 105 ~~~~~~~~~~l~~l~---~~g~~~~i~tn~~~~-~~~~l~~~-------gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~ 173 (263)
T 3k1z_A 105 WQVLDGAEDTLRECR---TRGLRLAVISNFDRR-LEGILGGL-------GLREHFDFVLTSEAAGWPKPDPRIFQEALRL 173 (263)
T ss_dssp EEECTTHHHHHHHHH---HTTCEEEEEESCCTT-HHHHHHHT-------TCGGGCSCEEEHHHHSSCTTSHHHHHHHHHH
T ss_pred ceECcCHHHHHHHHH---hCCCcEEEEeCCcHH-HHHHHHhC-------CcHHhhhEEEeecccCCCCCCHHHHHHHHHH
Confidence 567899999777776 456999999998875 56777663 34455678887632 2112 13323221
Q ss_pred CCCCCcEEEEEcCCc--ccCCCC
Q 002970 240 GTCHPKMALVIDDRL--KVWDDK 260 (862)
Q Consensus 240 ~~~~~~~vVIIDDR~--dVW~~~ 260 (862)
....++-+|+|+|+. ||-...
T Consensus 174 ~g~~~~~~~~vGD~~~~Di~~a~ 196 (263)
T 3k1z_A 174 AHMEPVVAAHVGDNYLCDYQGPR 196 (263)
T ss_dssp HTCCGGGEEEEESCHHHHTHHHH
T ss_pred cCCCHHHEEEECCCcHHHHHHHH
Confidence 125678899999994 675443
No 119
>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}
Probab=96.92 E-value=0.0017 Score=62.48 Aligned_cols=76 Identities=17% Similarity=0.142 Sum_probs=46.9
Q ss_pred eCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-Ccc----chhhhccCCC
Q 002970 167 LRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-SRK----SLFNVFQDGT 241 (862)
Q Consensus 167 LRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres~-~~K----sL~~lfp~~~ 241 (862)
+.|++.+++.+|+ ..-|.+.|+|++.+ +..+++.+ +...+|+.|++.++. ..| -+..++....
T Consensus 93 ~~~~~~~~l~~l~---~~g~~~~i~t~~~~--~~~~l~~~-------gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lg 160 (233)
T 3nas_A 93 LLPGIGRLLCQLK---NENIKIGLASSSRN--APKILRRL-------AIIDDFHAIVDPTTLAKGKPDPDIFLTAAAMLD 160 (233)
T ss_dssp SCTTHHHHHHHHH---HTTCEEEECCSCTT--HHHHHHHT-------TCTTTCSEECCC---------CCHHHHHHHHHT
T ss_pred cCcCHHHHHHHHH---HCCCcEEEEcCchh--HHHHHHHc-------CcHhhcCEEeeHhhCCCCCCChHHHHHHHHHcC
Confidence 5689999777776 44599999999966 66777663 334455677765432 112 2333332212
Q ss_pred CCCcEEEEEcCCc
Q 002970 242 CHPKMALVIDDRL 254 (862)
Q Consensus 242 ~~~~~vVIIDDR~ 254 (862)
..++-+|+|+|+.
T Consensus 161 i~~~~~i~vGDs~ 173 (233)
T 3nas_A 161 VSPADCAAIEDAE 173 (233)
T ss_dssp SCGGGEEEEECSH
T ss_pred CCHHHEEEEeCCH
Confidence 5677888889985
No 120
>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}
Probab=96.90 E-value=0.00084 Score=63.77 Aligned_cols=87 Identities=13% Similarity=0.112 Sum_probs=54.6
Q ss_pred EEeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccC-CCc----cchhhhcc
Q 002970 164 LVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKS-GSR----KSLFNVFQ 238 (862)
Q Consensus 164 ~vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres-~~~----KsL~~lfp 238 (862)
++++.|++.+++..|+ + .|.++|+|++.+.++..+++.|-.. ..++...+++.|++.++ +.. .-+..++.
T Consensus 87 ~~~~~~~~~~~l~~l~-~---g~~~~i~t~~~~~~~~~~~~~l~~~-~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~ 161 (211)
T 2i6x_A 87 LEEISAEKFDYIDSLR-P---DYRLFLLSNTNPYVLDLAMSPRFLP-SGRTLDSFFDKVYASCQMGKYKPNEDIFLEMIA 161 (211)
T ss_dssp EEEECHHHHHHHHHHT-T---TSEEEEEECCCHHHHHHHTSTTSST-TCCCGGGGSSEEEEHHHHTCCTTSHHHHHHHHH
T ss_pred hcccChHHHHHHHHHH-c---CCeEEEEeCCCHHHHHHHHhhhccc-cccCHHHHcCeEEeecccCCCCCCHHHHHHHHH
Confidence 4578899999777776 2 6999999999999988777652110 00344456678887532 111 12222222
Q ss_pred CCCCCCcEEEEEcCCcc
Q 002970 239 DGTCHPKMALVIDDRLK 255 (862)
Q Consensus 239 ~~~~~~~~vVIIDDR~d 255 (862)
.....++-+++|+|+..
T Consensus 162 ~~~~~~~~~~~igD~~~ 178 (211)
T 2i6x_A 162 DSGMKPEETLFIDDGPA 178 (211)
T ss_dssp HHCCCGGGEEEECSCHH
T ss_pred HhCCChHHeEEeCCCHH
Confidence 11256778999999863
No 121
>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A
Probab=96.81 E-value=0.0037 Score=61.82 Aligned_cols=78 Identities=12% Similarity=0.046 Sum_probs=51.5
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccC-C----CccchhhhccC
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKS-G----SRKSLFNVFQD 239 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres-~----~~KsL~~lfp~ 239 (862)
+++.|++.+++..| . .|.++|.|++.+.++..+++.+ +...+++.|++.++ + ....+..++..
T Consensus 92 ~~~~~~~~~~l~~l----~-g~~~~i~t~~~~~~~~~~l~~~-------gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~ 159 (253)
T 1qq5_A 92 LTPYPDAAQCLAEL----A-PLKRAILSNGAPDMLQALVANA-------GLTDSFDAVISVDAKRVFKPHPDSYALVEEV 159 (253)
T ss_dssp CCBCTTHHHHHHHH----T-TSEEEEEESSCHHHHHHHHHHT-------TCGGGCSEEEEGGGGTCCTTSHHHHHHHHHH
T ss_pred CCCCccHHHHHHHH----c-CCCEEEEeCcCHHHHHHHHHHC-------CchhhccEEEEccccCCCCCCHHHHHHHHHH
Confidence 35779999954444 4 7999999999999999998875 33445678887643 1 11123333221
Q ss_pred CCCCCcEEEEEcCCc
Q 002970 240 GTCHPKMALVIDDRL 254 (862)
Q Consensus 240 ~~~~~~~vVIIDDR~ 254 (862)
....++-+++|+|+.
T Consensus 160 ~~~~~~~~~~vGD~~ 174 (253)
T 1qq5_A 160 LGVTPAEVLFVSSNG 174 (253)
T ss_dssp HCCCGGGEEEEESCH
T ss_pred cCCCHHHEEEEeCCh
Confidence 125667788888874
No 122
>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A
Probab=96.74 E-value=0.0021 Score=62.66 Aligned_cols=81 Identities=14% Similarity=0.107 Sum_probs=51.6
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-----CccchhhhccC
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-----SRKSLFNVFQD 239 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres~-----~~KsL~~lfp~ 239 (862)
+++.|++.+++..|+ ..-|.+.|+|++.+.++..+++. .-..+|.. +.|++.++. ....+..++..
T Consensus 108 ~~~~~~~~~~l~~l~---~~g~~~~i~t~~~~~~~~~~l~~--~l~~~f~~----d~i~~~~~~~~~kp~~~~~~~~~~~ 178 (243)
T 3qxg_A 108 AERMPGAWELLQKVK---SEGLTPMVVTGSGQLSLLERLEH--NFPGMFHK----ELMVTAFDVKYGKPNPEPYLMALKK 178 (243)
T ss_dssp CCBCTTHHHHHHHHH---HTTCEEEEECCCCCHHHHTTHHH--HSTTTCCG----GGEECTTTCSSCTTSSHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHH---HcCCcEEEEeCCcHHHHHHHHHH--hHHHhcCc----ceEEeHHhCCCCCCChHHHHHHHHH
Confidence 356799999777776 44599999999999988877764 11233410 467765432 11223333332
Q ss_pred CCCCCcEEEEEcCCc
Q 002970 240 GTCHPKMALVIDDRL 254 (862)
Q Consensus 240 ~~~~~~~vVIIDDR~ 254 (862)
....++-+|+|+|+.
T Consensus 179 lg~~~~~~i~vGD~~ 193 (243)
T 3qxg_A 179 GGLKADEAVVIENAP 193 (243)
T ss_dssp TTCCGGGEEEEECSH
T ss_pred cCCCHHHeEEEeCCH
Confidence 226678899999986
No 123
>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}
Probab=96.72 E-value=0.0027 Score=61.23 Aligned_cols=81 Identities=14% Similarity=0.155 Sum_probs=48.9
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-Cc----cchhhhccC
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-SR----KSLFNVFQD 239 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres~-~~----KsL~~lfp~ 239 (862)
+++.|++.+++..|+ ..-|.+.|+|++.+.++..+++. .-..+|.. +.|++.+.. .. .-+..++..
T Consensus 107 ~~~~~~~~~~l~~l~---~~g~~~~i~t~~~~~~~~~~l~~--~l~~~f~~----~~~~~~~~~~~~kp~~~~~~~~~~~ 177 (247)
T 3dv9_A 107 AERMPGALEVLTKIK---SEGLTPMVVTGSGQTSLLDRLNH--NFPGIFQA----NLMVTAFDVKYGKPNPEPYLMALKK 177 (247)
T ss_dssp CCBCTTHHHHHHHHH---HTTCEEEEECSCC---CHHHHHH--HSTTTCCG----GGEECGGGCSSCTTSSHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHH---HcCCcEEEEcCCchHHHHHHHHh--hHHHhcCC----CeEEecccCCCCCCCCHHHHHHHHH
Confidence 456799999777776 45699999999999998888764 11233410 467766432 11 123333322
Q ss_pred CCCCCcEEEEEcCCc
Q 002970 240 GTCHPKMALVIDDRL 254 (862)
Q Consensus 240 ~~~~~~~vVIIDDR~ 254 (862)
.+..++-+|+|+|+.
T Consensus 178 lg~~~~~~i~vGD~~ 192 (247)
T 3dv9_A 178 GGFKPNEALVIENAP 192 (247)
T ss_dssp HTCCGGGEEEEECSH
T ss_pred cCCChhheEEEeCCH
Confidence 225677899999986
No 124
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=96.70 E-value=0.0054 Score=61.08 Aligned_cols=73 Identities=12% Similarity=0.137 Sum_probs=50.8
Q ss_pred eeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-Cc--------cchhhh
Q 002970 166 RLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-SR--------KSLFNV 236 (862)
Q Consensus 166 KLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres~-~~--------KsL~~l 236 (862)
++.||+.+++..|+ ...+-+.|.|++.+ +..+++. ++...+|+.|++.++. .. +.++++
T Consensus 95 ~~~pg~~~ll~~L~---~~g~~i~i~t~~~~--~~~~l~~-------~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~l 162 (243)
T 4g9b_A 95 AVLPGIRSLLADLR---AQQISVGLASVSLN--APTILAA-------LELREFFTFCADASQLKNSKPDPEIFLAACAGL 162 (243)
T ss_dssp GBCTTHHHHHHHHH---HTTCEEEECCCCTT--HHHHHHH-------TTCGGGCSEECCGGGCSSCTTSTHHHHHHHHHH
T ss_pred cccccHHHHHHhhh---cccccceecccccc--hhhhhhh-------hhhccccccccccccccCCCCcHHHHHHHHHHc
Confidence 45699999888887 56788889998765 5666666 4555677888887542 22 333333
Q ss_pred ccCCCCCCcEEEEEcCCc
Q 002970 237 FQDGTCHPKMALVIDDRL 254 (862)
Q Consensus 237 fp~~~~~~~~vVIIDDR~ 254 (862)
- +.++-+|+|+|+.
T Consensus 163 g----~~p~e~l~VgDs~ 176 (243)
T 4g9b_A 163 G----VPPQACIGIEDAQ 176 (243)
T ss_dssp T----SCGGGEEEEESSH
T ss_pred C----CChHHEEEEcCCH
Confidence 2 5778899999984
No 125
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=96.66 E-value=0.0021 Score=69.72 Aligned_cols=41 Identities=17% Similarity=0.037 Sum_probs=35.1
Q ss_pred eeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCC
Q 002970 166 RLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPE 209 (862)
Q Consensus 166 KLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~ 209 (862)
+++|++.++++.|+ +.-|.++|.|+|.+.++..+++.+.=+
T Consensus 256 ~~~pg~~e~l~~Lk---~~G~~~~ivS~~~~~~~~~~~~~lgl~ 296 (415)
T 3p96_A 256 ELMPGARTTLRTLR---RLGYACGVVSGGFRRIIEPLAEELMLD 296 (415)
T ss_dssp CBCTTHHHHHHHHH---HTTCEEEEEEEEEHHHHHHHHHHTTCS
T ss_pred ccCccHHHHHHHHH---HCCCEEEEEcCCcHHHHHHHHHHcCcc
Confidence 68899999777776 456999999999999999999997653
No 126
>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}
Probab=96.61 E-value=0.002 Score=62.65 Aligned_cols=77 Identities=12% Similarity=0.105 Sum_probs=50.8
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccC-C----CccchhhhccC
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKS-G----SRKSLFNVFQD 239 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres-~----~~KsL~~lfp~ 239 (862)
+++.|++.+++..|+ +.|.+.|+|++.+.++..+++.+.-. ++.|++.+. + ...-+..++..
T Consensus 119 ~~~~~~~~~~l~~l~----~~~~~~i~s~~~~~~~~~~l~~~g~~---------f~~~~~~~~~~~~kp~~~~~~~~~~~ 185 (254)
T 3umc_A 119 LRPWPDTLAGMHALK----ADYWLAALSNGNTALMLDVARHAGLP---------WDMLLCADLFGHYKPDPQVYLGACRL 185 (254)
T ss_dssp CEECTTHHHHHHHHT----TTSEEEECCSSCHHHHHHHHHHHTCC---------CSEECCHHHHTCCTTSHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHH----hcCeEEEEeCCCHHHHHHHHHHcCCC---------cceEEeecccccCCCCHHHHHHHHHH
Confidence 466799999666665 24999999999999999999886432 356766532 1 11223323221
Q ss_pred CCCCCcEEEEEcCCc
Q 002970 240 GTCHPKMALVIDDRL 254 (862)
Q Consensus 240 ~~~~~~~vVIIDDR~ 254 (862)
....++-+++|+|+.
T Consensus 186 lgi~~~~~~~iGD~~ 200 (254)
T 3umc_A 186 LDLPPQEVMLCAAHN 200 (254)
T ss_dssp HTCCGGGEEEEESCH
T ss_pred cCCChHHEEEEcCch
Confidence 125677888899874
No 127
>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}
Probab=96.56 E-value=0.0023 Score=61.69 Aligned_cols=77 Identities=10% Similarity=0.025 Sum_probs=50.7
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccC-C----CccchhhhccC
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKS-G----SRKSLFNVFQD 239 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres-~----~~KsL~~lfp~ 239 (862)
+++.|++.+++..|+ .. |.+.|+|++.+.++..+++.+.-. | +.|++.+. + ....+..++..
T Consensus 115 ~~~~~~~~~~l~~l~---~~-~~~~i~t~~~~~~~~~~l~~~~~~---f------~~~~~~~~~~~~kp~~~~~~~~~~~ 181 (254)
T 3umg_A 115 LTPWPDSVPGLTAIK---AE-YIIGPLSNGNTSLLLDMAKNAGIP---W------DVIIGSDINRKYKPDPQAYLRTAQV 181 (254)
T ss_dssp CCBCTTHHHHHHHHH---HH-SEEEECSSSCHHHHHHHHHHHTCC---C------SCCCCHHHHTCCTTSHHHHHHHHHH
T ss_pred CcCCcCHHHHHHHHH---hC-CeEEEEeCCCHHHHHHHHHhCCCC---e------eEEEEcCcCCCCCCCHHHHHHHHHH
Confidence 356799999766665 23 999999999999999999886432 3 45655432 1 12223333332
Q ss_pred CCCCCcEEEEEcCCc
Q 002970 240 GTCHPKMALVIDDRL 254 (862)
Q Consensus 240 ~~~~~~~vVIIDDR~ 254 (862)
.+..++-+++|+|+.
T Consensus 182 lgi~~~~~~~iGD~~ 196 (254)
T 3umg_A 182 LGLHPGEVMLAAAHN 196 (254)
T ss_dssp TTCCGGGEEEEESCH
T ss_pred cCCChHHEEEEeCCh
Confidence 225677888888874
No 128
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*
Probab=96.52 E-value=0.01 Score=58.71 Aligned_cols=71 Identities=15% Similarity=0.165 Sum_probs=48.3
Q ss_pred eeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-CccchhhhccCCCCCC
Q 002970 166 RLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-SRKSLFNVFQDGTCHP 244 (862)
Q Consensus 166 KLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres~-~~KsL~~lfp~~~~~~ 244 (862)
+++|++.+++..|+ ..-+.+.|+|++.+.++..+++.+. ...++..|++.+.. ..|.+...+
T Consensus 144 ~~~~~~~~~l~~l~---~~g~~~~i~T~~~~~~~~~~~~~~g-------l~~~f~~~~~~~k~~~~k~~~~~~------- 206 (280)
T 3skx_A 144 RIRPESREAISKLK---AIGIKCMMLTGDNRFVAKWVAEELG-------LDDYFAEVLPHEKAEKVKEVQQKY------- 206 (280)
T ss_dssp EECTTHHHHHHHHH---HTTCEEEEECSSCHHHHHHHHHHHT-------CSEEECSCCGGGHHHHHHHHHTTS-------
T ss_pred CCCHhHHHHHHHHH---HCCCEEEEEeCCCHHHHHHHHHHcC-------ChhHhHhcCHHHHHHHHHHHHhcC-------
Confidence 89999999888886 4568999999999999999999854 23344455554322 223333322
Q ss_pred cEEEEEcCCc
Q 002970 245 KMALVIDDRL 254 (862)
Q Consensus 245 ~~vVIIDDR~ 254 (862)
-+++|.|..
T Consensus 207 -~~~~vGD~~ 215 (280)
T 3skx_A 207 -VTAMVGDGV 215 (280)
T ss_dssp -CEEEEECTT
T ss_pred -CEEEEeCCc
Confidence 356777763
No 129
>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3
Probab=96.45 E-value=0.0085 Score=55.71 Aligned_cols=75 Identities=20% Similarity=0.240 Sum_probs=46.1
Q ss_pred eCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-----CccchhhhccCCC
Q 002970 167 LRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-----SRKSLFNVFQDGT 241 (862)
Q Consensus 167 LRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres~-----~~KsL~~lfp~~~ 241 (862)
+.|++.+++.+|+ ..-+.++|+|++. .++..+++.+ +....++.+++.++. ....+..+.....
T Consensus 83 ~~~~~~~~l~~l~---~~g~~~~i~t~~~-~~~~~~l~~~-------~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~ 151 (190)
T 2fi1_A 83 LFEGVSDLLEDIS---NQGGRHFLVSHRN-DQVLEILEKT-------SIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQ 151 (190)
T ss_dssp BCTTHHHHHHHHH---HTTCEEEEECSSC-THHHHHHHHT-------TCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTT
T ss_pred cCcCHHHHHHHHH---HCCCcEEEEECCc-HHHHHHHHHc-------CCHhheeeeeeccccCCCCCCHHHHHHHHHHcC
Confidence 6799999777775 4459999999886 4777777764 333445667765321 1222333332211
Q ss_pred CCCcEEEEEcCCc
Q 002970 242 CHPKMALVIDDRL 254 (862)
Q Consensus 242 ~~~~~vVIIDDR~ 254 (862)
.. -++.|+|+.
T Consensus 152 ~~--~~~~iGD~~ 162 (190)
T 2fi1_A 152 IS--SGLVIGDRP 162 (190)
T ss_dssp CS--SEEEEESSH
T ss_pred CC--eEEEEcCCH
Confidence 33 678888874
No 130
>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}
Probab=96.39 E-value=0.0075 Score=57.62 Aligned_cols=77 Identities=17% Similarity=0.297 Sum_probs=48.6
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccC-CCcc----chhhhccC
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKS-GSRK----SLFNVFQD 239 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres-~~~K----sL~~lfp~ 239 (862)
+++.|++.+++..|+ .. |.+.|+|++.+. ++ .++...+++.|++.+. +..| .+..++..
T Consensus 104 ~~~~~~~~~~l~~l~---~~-~~~~i~t~~~~~-----l~-------~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~ 167 (230)
T 3vay_A 104 VQIFPEVQPTLEILA---KT-FTLGVITNGNAD-----VR-------RLGLADYFAFALCAEDLGIGKPDPAPFLEALRR 167 (230)
T ss_dssp CCBCTTHHHHHHHHH---TT-SEEEEEESSCCC-----GG-------GSTTGGGCSEEEEHHHHTCCTTSHHHHHHHHHH
T ss_pred CccCcCHHHHHHHHH---hC-CeEEEEECCchh-----hh-------hcCcHHHeeeeEEccccCCCCcCHHHHHHHHHH
Confidence 456799999666665 33 999999999876 11 2344566778888642 2112 23333322
Q ss_pred CCCCCcEEEEEcCCc--ccC
Q 002970 240 GTCHPKMALVIDDRL--KVW 257 (862)
Q Consensus 240 ~~~~~~~vVIIDDR~--dVW 257 (862)
....++-+++|+|+. |+-
T Consensus 168 ~~~~~~~~~~vGD~~~~Di~ 187 (230)
T 3vay_A 168 AKVDASAAVHVGDHPSDDIA 187 (230)
T ss_dssp HTCCGGGEEEEESCTTTTHH
T ss_pred hCCCchheEEEeCChHHHHH
Confidence 225678899999984 563
No 131
>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}
Probab=96.34 E-value=0.0074 Score=60.93 Aligned_cols=79 Identities=14% Similarity=0.065 Sum_probs=50.7
Q ss_pred EeeCcChHHHHHHHhhhccc-cEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-----Cccchhhhcc
Q 002970 165 VRLRPAWEDLRSYLTARGRK-RFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-----SRKSLFNVFQ 238 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk-~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres~-----~~KsL~~lfp 238 (862)
+++.|++.+++..|+ .. .+.+.|+|++.+.++..+++.++-. . ++.++|.++. ....+..+..
T Consensus 113 ~~~~~g~~~~L~~l~---~~~g~~l~i~T~~~~~~~~~~l~~~~l~--~------f~~i~~~~~~~~~kp~~~~~~~~~~ 181 (275)
T 2qlt_A 113 SIEVPGAVKLCNALN---ALPKEKWAVATSGTRDMAKKWFDILKIK--R------PEYFITANDVKQGKPHPEPYLKGRN 181 (275)
T ss_dssp CEECTTHHHHHHHHH---TSCGGGEEEECSSCHHHHHHHHHHHTCC--C------CSSEECGGGCSSCTTSSHHHHHHHH
T ss_pred CCcCcCHHHHHHHHH---hccCCeEEEEeCCCHHHHHHHHHHcCCC--c------cCEEEEcccCCCCCCChHHHHHHHH
Confidence 356799999777775 33 5889999999999999999886432 1 3466665431 1112232322
Q ss_pred CCCC-------CCcEEEEEcCCc
Q 002970 239 DGTC-------HPKMALVIDDRL 254 (862)
Q Consensus 239 ~~~~-------~~~~vVIIDDR~ 254 (862)
.-.. .++-+++|+|+.
T Consensus 182 ~lgi~~~~~~~~~~~~i~~GDs~ 204 (275)
T 2qlt_A 182 GLGFPINEQDPSKSKVVVFEDAP 204 (275)
T ss_dssp HTTCCCCSSCGGGSCEEEEESSH
T ss_pred HcCCCccccCCCcceEEEEeCCH
Confidence 1114 566788888875
No 132
>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}
Probab=96.22 E-value=0.0042 Score=58.94 Aligned_cols=69 Identities=16% Similarity=0.341 Sum_probs=40.5
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCc---HHHHHHHHHhhCCCCCccccccccCeEEeccCCCccchhhhccCCC
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAE---RDYALEMWRLLDPESNLINTKELLDRIVCVKSGSRKSLFNVFQDGT 241 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~---R~YA~~I~rlLDP~g~lFg~~~l~~RIisres~~~KsL~~lfp~~~ 241 (862)
+++.||+.+++..|+ .. |.+.|.|++. +... .....|+. +|+....++.|+|.+.. .+
T Consensus 68 ~~~~pg~~e~L~~L~---~~-~~~~i~T~~~~~~~~~~-~~~~~l~~---~f~~~~~~~~i~~~~~~-------~l---- 128 (180)
T 3bwv_A 68 LDVMPHAQEVVKQLN---EH-YDIYIATAAMDVPTSFH-DKYEWLLE---YFPFLDPQHFVFCGRKN-------II---- 128 (180)
T ss_dssp CCBCTTHHHHHHHHT---TT-SEEEEEECC--CCSHHH-HHHHHHHH---HCTTSCGGGEEECSCGG-------GB----
T ss_pred CCCCcCHHHHHHHHH---hc-CCEEEEeCCCCcchHHH-HHHHHHHH---HcCCCCcccEEEeCCcC-------ee----
Confidence 567899999777775 34 9999999983 2232 11222221 13322334678776431 11
Q ss_pred CCCcEEEEEcCCcc
Q 002970 242 CHPKMALVIDDRLK 255 (862)
Q Consensus 242 ~~~~~vVIIDDR~d 255 (862)
..+++|||+..
T Consensus 129 ---~~~l~ieDs~~ 139 (180)
T 3bwv_A 129 ---LADYLIDDNPK 139 (180)
T ss_dssp ---CCSEEEESCHH
T ss_pred ---cccEEecCCcc
Confidence 23688999876
No 133
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=96.19 E-value=0.015 Score=58.02 Aligned_cols=73 Identities=14% Similarity=0.194 Sum_probs=47.7
Q ss_pred eeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-Cc--------cchhhh
Q 002970 166 RLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-SR--------KSLFNV 236 (862)
Q Consensus 166 KLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres~-~~--------KsL~~l 236 (862)
++.|++.+++.+|+ ...+-+.|.|+. ..+..+++. ++...+|+-|++.++. .. +.++++
T Consensus 116 ~~~p~~~~ll~~Lk---~~g~~i~i~~~~--~~~~~~L~~-------~gl~~~Fd~i~~~~~~~~~KP~p~~~~~a~~~l 183 (250)
T 4gib_A 116 DILPGIESLLIDVK---SNNIKIGLSSAS--KNAINVLNH-------LGISDKFDFIADAGKCKNNKPHPEIFLMSAKGL 183 (250)
T ss_dssp GSCTTHHHHHHHHH---HTTCEEEECCSC--TTHHHHHHH-------HTCGGGCSEECCGGGCCSCTTSSHHHHHHHHHH
T ss_pred ccchhHHHHHHHHH---hccccccccccc--chhhhHhhh-------cccccccceeecccccCCCCCcHHHHHHHHHHh
Confidence 45699999888887 445566665544 456677766 4555677788887542 22 233333
Q ss_pred ccCCCCCCcEEEEEcCCc
Q 002970 237 FQDGTCHPKMALVIDDRL 254 (862)
Q Consensus 237 fp~~~~~~~~vVIIDDR~ 254 (862)
.+.++-+|+|+|+.
T Consensus 184 ----g~~p~e~l~VGDs~ 197 (250)
T 4gib_A 184 ----NVNPQNCIGIEDAS 197 (250)
T ss_dssp ----TCCGGGEEEEESSH
T ss_pred ----CCChHHeEEECCCH
Confidence 25678899999985
No 134
>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*
Probab=95.78 E-value=0.021 Score=53.51 Aligned_cols=40 Identities=13% Similarity=-0.053 Sum_probs=32.8
Q ss_pred eeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCC
Q 002970 166 RLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDP 208 (862)
Q Consensus 166 KLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP 208 (862)
++.|++.+++.+|+ ..-+.+.|+|.+.+.++..+++.+.-
T Consensus 76 ~l~~~~~~~l~~l~---~~g~~~~i~T~~~~~~~~~~~~~~~~ 115 (211)
T 1l7m_A 76 TPTEGAEETIKELK---NRGYVVAVVSGGFDIAVNKIKEKLGL 115 (211)
T ss_dssp CBCTTHHHHHHHHH---HTTEEEEEEEEEEHHHHHHHHHHHTC
T ss_pred CCCccHHHHHHHHH---HCCCEEEEEcCCcHHHHHHHHHHcCC
Confidence 45689999888886 45699999999999999888887654
No 135
>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22
Probab=95.78 E-value=0.011 Score=60.85 Aligned_cols=79 Identities=10% Similarity=0.195 Sum_probs=48.8
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCC----CCccccccccCeEEec-----cCC---Cccc
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPE----SNLINTKELLDRIVCV-----KSG---SRKS 232 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~----g~lFg~~~l~~RIisr-----es~---~~Ks 232 (862)
+++.|++.+ +|+ . .|-++|+|++.+..+..+++.+... -..++...+++.+++. |.. ..+.
T Consensus 124 ~~~~pgv~e---~L~-~---g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~~~~~f~~~~~g~KP~p~~~~~a 196 (253)
T 2g80_A 124 APVYADAID---FIK-R---KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSGKKTETQSYANI 196 (253)
T ss_dssp BCCCHHHHH---HHH-H---CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHHHCCTTCHHHHHHH
T ss_pred CCCCCCHHH---HHH-c---CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhhcceEEeeeccCCCCCHHHHHHH
Confidence 466799988 887 3 6899999999999999998875321 0112222334444432 111 1122
Q ss_pred hhhhccCCCCCCcEEEEEcCCc
Q 002970 233 LFNVFQDGTCHPKMALVIDDRL 254 (862)
Q Consensus 233 L~~lfp~~~~~~~~vVIIDDR~ 254 (862)
++++ . ..++-+|+|+|+.
T Consensus 197 ~~~l-g---~~p~~~l~vgDs~ 214 (253)
T 2g80_A 197 LRDI-G---AKASEVLFLSDNP 214 (253)
T ss_dssp HHHH-T---CCGGGEEEEESCH
T ss_pred HHHc-C---CCcccEEEEcCCH
Confidence 3332 2 5677889999985
No 136
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=95.59 E-value=0.021 Score=59.81 Aligned_cols=42 Identities=14% Similarity=0.129 Sum_probs=35.3
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCC
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPE 209 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~ 209 (862)
++++|++.+++..|+ ..-|.+.|.|++.+.++..+++.+.=+
T Consensus 177 ~~~~pg~~~~l~~L~---~~g~~~~ivS~~~~~~~~~~~~~lgl~ 218 (335)
T 3n28_A 177 LPLMPELPELVATLH---AFGWKVAIASGGFTYFSDYLKEQLSLD 218 (335)
T ss_dssp CCCCTTHHHHHHHHH---HTTCEEEEEEEEEHHHHHHHHHHHTCS
T ss_pred CCcCcCHHHHHHHHH---HCCCEEEEEeCCcHHHHHHHHHHcCCC
Confidence 357899999888886 456999999999999999999887643
No 137
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=95.40 E-value=0.02 Score=56.20 Aligned_cols=39 Identities=15% Similarity=0.025 Sum_probs=31.2
Q ss_pred eeCcChHHHHHHHhhhccccEEEEEEeCCc---------------HHHHHHHHHhhC
Q 002970 166 RLRPAWEDLRSYLTARGRKRFEVYVCTMAE---------------RDYALEMWRLLD 207 (862)
Q Consensus 166 KLRPgv~eLr~FL~a~~sk~FEl~VyTmG~---------------R~YA~~I~rlLD 207 (862)
++.|++.+++..|+ .+-|.+.|+|++. +.++..+++.++
T Consensus 50 ~~~pg~~e~L~~L~---~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 103 (211)
T 2gmw_A 50 EFIDGVIDAMRELK---KMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRD 103 (211)
T ss_dssp CBCTTHHHHHHHHH---HTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTT
T ss_pred cCCcCHHHHHHHHH---HCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcC
Confidence 44589999777776 4569999999999 588888888754
No 138
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=95.23 E-value=0.043 Score=58.54 Aligned_cols=74 Identities=19% Similarity=0.181 Sum_probs=45.3
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCC------cHHHHHHHHHhhCCCCCccccccccCeEEeccC-CC--------
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMA------ERDYALEMWRLLDPESNLINTKELLDRIVCVKS-GS-------- 229 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG------~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres-~~-------- 229 (862)
+++.|++.+++..|+ .+-|.+.|+||+ .+........-|+ .+|+.|++.++ +.
T Consensus 99 ~~~~~~~~~~L~~L~---~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~---------~~fd~i~~~~~~~~~KP~p~~~ 166 (555)
T 3i28_A 99 RKINRPMLQAALMLR---KKGFTTAILTNTWLDDRAERDGLAQLMCELK---------MHFDFLIESCQVGMVKPEPQIY 166 (555)
T ss_dssp CEECHHHHHHHHHHH---HTTCEEEEEECCCCCCSTTHHHHHHHHHHHH---------TTSSEEEEHHHHTCCTTCHHHH
T ss_pred cCcChhHHHHHHHHH---HCCCEEEEEeCCCccccchhhHHHHHhhhhh---------hheeEEEeccccCCCCCCHHHH
Confidence 467799999777665 455999999999 5555444432222 23457777632 21
Q ss_pred ccchhhhccCCCCCCcEEEEEcCCc
Q 002970 230 RKSLFNVFQDGTCHPKMALVIDDRL 254 (862)
Q Consensus 230 ~KsL~~lfp~~~~~~~~vVIIDDR~ 254 (862)
.+.++++ . ..++-+++|||+.
T Consensus 167 ~~~~~~l-g---~~p~~~~~v~D~~ 187 (555)
T 3i28_A 167 KFLLDTL-K---ASPSEVVFLDDIG 187 (555)
T ss_dssp HHHHHHH-T---CCGGGEEEEESCH
T ss_pred HHHHHHc-C---CChhHEEEECCcH
Confidence 1233333 2 5667788889974
No 139
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=95.09 E-value=0.04 Score=51.10 Aligned_cols=75 Identities=8% Similarity=-0.058 Sum_probs=45.4
Q ss_pred eeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCCCccchhhhccCCCCCCc
Q 002970 166 RLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSGSRKSLFNVFQDGTCHPK 245 (862)
Q Consensus 166 KLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres~~~KsL~~lfp~~~~~~~ 245 (862)
.+.|...+++..|+ +.-+.++|+|++.+.++..+++.+.-+ .+|. . .+. ....+..++......++
T Consensus 36 ~~~~~~~~~l~~l~---~~g~~~~i~T~~~~~~~~~~l~~~gl~-~~~~-----~----~kp-~~~~~~~~~~~~~~~~~ 101 (162)
T 2p9j_A 36 VFNVLDGIGIKLLQ---KMGITLAVISGRDSAPLITRLKELGVE-EIYT-----G----SYK-KLEIYEKIKEKYSLKDE 101 (162)
T ss_dssp EEEHHHHHHHHHHH---TTTCEEEEEESCCCHHHHHHHHHTTCC-EEEE-----C----C---CHHHHHHHHHHTTCCGG
T ss_pred eecccHHHHHHHHH---HCCCEEEEEeCCCcHHHHHHHHHcCCH-hhcc-----C----CCC-CHHHHHHHHHHcCCCHH
Confidence 34466677666675 456999999999999999999986533 2333 1 111 11222222221114566
Q ss_pred EEEEEcCCc
Q 002970 246 MALVIDDRL 254 (862)
Q Consensus 246 ~vVIIDDR~ 254 (862)
-+++|+|+.
T Consensus 102 ~~~~vGD~~ 110 (162)
T 2p9j_A 102 EIGFIGDDV 110 (162)
T ss_dssp GEEEEECSG
T ss_pred HEEEECCCH
Confidence 788888875
No 140
>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*
Probab=94.90 E-value=0.042 Score=52.71 Aligned_cols=39 Identities=15% Similarity=0.138 Sum_probs=31.5
Q ss_pred EeeCcChHHHHHHHhhhccc-cEEEEEEeCCcHHHHHHHHHhh
Q 002970 165 VRLRPAWEDLRSYLTARGRK-RFEVYVCTMAERDYALEMWRLL 206 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk-~FEl~VyTmG~R~YA~~I~rlL 206 (862)
+++.||+.+++..|+ .. -|.++|.|++.+.++..+++.+
T Consensus 72 ~~~~~g~~e~L~~L~---~~~g~~~~ivT~~~~~~~~~~l~~~ 111 (193)
T 2i7d_A 72 LEPIPGALDAVREMN---DLPDTQVFICTSPLLKYHHCVGEKY 111 (193)
T ss_dssp CCBCTTHHHHHHHHH---TSTTEEEEEEECCCSSCTTTHHHHH
T ss_pred CccCcCHHHHHHHHH---hCCCCeEEEEeCCChhhHHHHHHHh
Confidence 457799999666665 34 6999999999999988888774
No 141
>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A
Probab=94.79 E-value=0.0083 Score=62.22 Aligned_cols=38 Identities=16% Similarity=0.225 Sum_probs=27.2
Q ss_pred eeCcChHHHHHHHhhhccccEEEEEEeCCc---HHHHHHHHHhh
Q 002970 166 RLRPAWEDLRSYLTARGRKRFEVYVCTMAE---RDYALEMWRLL 206 (862)
Q Consensus 166 KLRPgv~eLr~FL~a~~sk~FEl~VyTmG~---R~YA~~I~rlL 206 (862)
++-|++.+++..|. .+-+.+.|+|+.. +......++.+
T Consensus 101 ~~~pg~~e~L~~L~---~~Gi~i~iaTnr~~~~~~~~~~~L~~~ 141 (258)
T 2i33_A 101 EALPGSIDFLKYTE---SKGVDIYYISNRKTNQLDATIKNLERV 141 (258)
T ss_dssp EECTTHHHHHHHHH---HTTCEEEEEEEEEGGGHHHHHHHHHHH
T ss_pred CcCccHHHHHHHHH---HCCCEEEEEcCCchhHHHHHHHHHHHc
Confidence 34589999777776 5669999999998 44455555543
No 142
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=94.39 E-value=0.029 Score=53.90 Aligned_cols=85 Identities=11% Similarity=0.075 Sum_probs=57.4
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcH---HHHHHHHHhhCCCCCccccccccCeEEeccC-----CCccc----
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAER---DYALEMWRLLDPESNLINTKELLDRIVCVKS-----GSRKS---- 232 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R---~YA~~I~rlLDP~g~lFg~~~l~~RIisres-----~~~Ks---- 232 (862)
+++.|++.+++..|+ ..-|.+.|+|++.+ .++..+++. ++...+|+.|++.++ +..|.
T Consensus 33 ~~~~~g~~~~L~~L~---~~g~~~~i~Tn~~~~~~~~~~~~l~~-------~gl~~~fd~i~~~~~~~~~~~~~KP~p~~ 102 (189)
T 3ib6_A 33 VVLRKNAKETLEKVK---QLGFKQAILSNTATSDTEVIKRVLTN-------FGIIDYFDFIYASNSELQPGKMEKPDKTI 102 (189)
T ss_dssp CCBCTTHHHHHHHHH---HTTCEEEEEECCSSCCHHHHHHHHHH-------TTCGGGEEEEEECCTTSSTTCCCTTSHHH
T ss_pred ceeCcCHHHHHHHHH---HCCCEEEEEECCCccchHHHHHHHHh-------cCchhheEEEEEccccccccCCCCcCHHH
Confidence 457799999777776 45699999999987 888888887 444556678888753 32221
Q ss_pred hhhhccCCCCCCcEEEEEcCC--cccCCC
Q 002970 233 LFNVFQDGTCHPKMALVIDDR--LKVWDD 259 (862)
Q Consensus 233 L~~lfp~~~~~~~~vVIIDDR--~dVW~~ 259 (862)
+..++....+.++-+|+|+|+ .|+...
T Consensus 103 ~~~~~~~~~~~~~~~l~VGD~~~~Di~~A 131 (189)
T 3ib6_A 103 FDFTLNALQIDKTEAVMVGNTFESDIIGA 131 (189)
T ss_dssp HHHHHHHHTCCGGGEEEEESBTTTTHHHH
T ss_pred HHHHHHHcCCCcccEEEECCCcHHHHHHH
Confidence 222222112567889999998 466433
No 143
>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A
Probab=94.33 E-value=0.046 Score=52.70 Aligned_cols=39 Identities=10% Similarity=0.192 Sum_probs=30.7
Q ss_pred EeeCcChHHHHHHHhhhccc-cEEEEEEeCCcHHHHHHHHHhh
Q 002970 165 VRLRPAWEDLRSYLTARGRK-RFEVYVCTMAERDYALEMWRLL 206 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk-~FEl~VyTmG~R~YA~~I~rlL 206 (862)
+++.||+.+++..|+ .+ -|.+.|.|++.+.++..+++.+
T Consensus 74 ~~~~~g~~e~L~~L~---~~~g~~~~ivT~~~~~~~~~~l~~~ 113 (197)
T 1q92_A 74 LEPLPGAVEAVKEMA---SLQNTDVFICTSPIKMFKYCPYEKY 113 (197)
T ss_dssp CCBCTTHHHHHHHHH---HSTTEEEEEEECCCSCCSSHHHHHH
T ss_pred CCcCcCHHHHHHHHH---hcCCCeEEEEeCCccchHHHHHHHh
Confidence 457799999777776 44 6999999999998877666553
No 144
>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A
Probab=93.84 E-value=0.069 Score=56.29 Aligned_cols=75 Identities=16% Similarity=0.185 Sum_probs=43.6
Q ss_pred eeCcChHHHHHHHhhhccccEEEEEEeCCcH----HHHHHHHHhhCCCCCcccccccc-CeEEeccCCCcc--chhhhcc
Q 002970 166 RLRPAWEDLRSYLTARGRKRFEVYVCTMAER----DYALEMWRLLDPESNLINTKELL-DRIVCVKSGSRK--SLFNVFQ 238 (862)
Q Consensus 166 KLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R----~YA~~I~rlLDP~g~lFg~~~l~-~RIisres~~~K--sL~~lfp 238 (862)
++-||+.+|+.+|. +.-+.|+|.|+-.. .....-++.+ |--+ .. +.|+.+.+...| .+..|..
T Consensus 101 ~~~pG~~ell~~L~---~~G~ki~ivTgR~~~~~r~~T~~~L~~l---Gi~~----~~~~~Lilr~~~~~K~~~r~~l~~ 170 (262)
T 3ocu_A 101 RAVPGAVEFNNYVN---SHNGKVFYVTNRKDSTEKSGTIDDMKRL---GFNG----VEESAFYLKKDKSAKAARFAEIEK 170 (262)
T ss_dssp EECTTHHHHHHHHH---HTTEEEEEEEEEETTTTHHHHHHHHHHH---TCSC----CSGGGEEEESSCSCCHHHHHHHHH
T ss_pred CCCccHHHHHHHHH---HCCCeEEEEeCCCccchHHHHHHHHHHc---CcCc----ccccceeccCCCCChHHHHHHHHh
Confidence 34489999777776 67799999998754 4555555543 2211 11 277766433222 2333333
Q ss_pred CCCCCCcEEEEEcCC
Q 002970 239 DGTCHPKMALVIDDR 253 (862)
Q Consensus 239 ~~~~~~~~vVIIDDR 253 (862)
.| -+.++.|+|.
T Consensus 171 ~G---y~iv~~vGD~ 182 (262)
T 3ocu_A 171 QG---YEIVLYVGDN 182 (262)
T ss_dssp TT---EEEEEEEESS
T ss_pred cC---CCEEEEECCC
Confidence 21 3567888776
No 145
>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=93.67 E-value=0.079 Score=50.97 Aligned_cols=78 Identities=22% Similarity=0.319 Sum_probs=55.1
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCCCcc----chhhhccCC
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSGSRK----SLFNVFQDG 240 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres~~~K----sL~~lfp~~ 240 (862)
+++.||+.+++..|+ . .|.+.|.|++.+.++..+++.+ +...+|+.|++.+ +..| -+..++...
T Consensus 83 ~~~~~g~~~~l~~L~---~-~~~l~i~T~~~~~~~~~~l~~~-------gl~~~f~~i~~~~-~~~Kp~p~~~~~~~~~l 150 (210)
T 2ah5_A 83 AQLFPQIIDLLEELS---S-SYPLYITTTKDTSTAQDMAKNL-------EIHHFFDGIYGSS-PEAPHKADVIHQALQTH 150 (210)
T ss_dssp CEECTTHHHHHHHHH---T-TSCEEEEEEEEHHHHHHHHHHT-------TCGGGCSEEEEEC-SSCCSHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHH---c-CCeEEEEeCCCHHHHHHHHHhc-------CchhheeeeecCC-CCCCCChHHHHHHHHHc
Confidence 467899999777776 3 7899999999999999998874 4455667888876 4222 122222222
Q ss_pred CCCCcEEEEEcCCc
Q 002970 241 TCHPKMALVIDDRL 254 (862)
Q Consensus 241 ~~~~~~vVIIDDR~ 254 (862)
++.++-+++|+|+.
T Consensus 151 g~~p~~~~~vgDs~ 164 (210)
T 2ah5_A 151 QLAPEQAIIIGDTK 164 (210)
T ss_dssp TCCGGGEEEEESSH
T ss_pred CCCcccEEEECCCH
Confidence 25677889999974
No 146
>2kou_A Dicer-like protein 4; ATP-binding, endonuclease, helicase, hydrolase, nuclease, nucleotide-binding, nucleus, RNA- binding; NMR {Arabidopsis thaliana}
Probab=93.21 E-value=0.15 Score=46.61 Aligned_cols=68 Identities=18% Similarity=0.202 Sum_probs=43.2
Q ss_pred CCchHHHHHHhhhcCC------CceeeecCCCCCCCCCCccEEEEEEECC-----EEEeeeecCCHHHHHHHHHHHHHHH
Q 002970 742 MGSVSALKELCMTEGL------GVVFQQQPPSSANSVQKDEVYAQVEIDG-----QVLGKGIGSTWDEAKMQAAEKALGS 810 (862)
Q Consensus 742 ~N~V~lLnELcqkeGL------~~~f~~e~v~~sGp~H~keF~aqV~IdG-----kvyG~GtGsSKKeAKqqAAe~AL~a 810 (862)
.|-|++|++||++.-- ...|.-+++. .....| |+|.+=. .+.|.-. +|||.||+.||-+|+..
T Consensus 4 ~sAi~lL~~yC~~Lp~d~~~~~~P~~~~~~~~----~~~~~~-c~v~LP~~splr~i~g~~~-~sk~~AK~sAAf~Ac~~ 77 (102)
T 2kou_A 4 GSSISMMYKYCSRLPHDEFFQPKPEFQFKPVD----EFGGTI-CRITLPANAPISEIESSLL-PSTEAAKKDACLKAVHE 77 (102)
T ss_dssp SHHHHHHHHHHTTSSSCTTCCSSCEEEEEECC----GGGCEE-EEEECCTTCSSCCEEEEEE-SSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCccccCccceEEEeEee----cCCCeE-EEEECCCCCCCCeeeCCcc-ccHHHHHHHHHHHHHHH
Confidence 4779999999985421 1222211011 112235 6666532 4555555 99999999999999999
Q ss_pred hhccc
Q 002970 811 LRSMF 815 (862)
Q Consensus 811 L~~~~ 815 (862)
|+.+-
T Consensus 78 L~~~G 82 (102)
T 2kou_A 78 LHNLG 82 (102)
T ss_dssp HHHHC
T ss_pred HHHCC
Confidence 98653
No 147
>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}
Probab=92.77 E-value=0.35 Score=50.88 Aligned_cols=75 Identities=12% Similarity=0.123 Sum_probs=44.1
Q ss_pred eeCcChHHHHHHHhhhccccEEEEEEeCCcH----HHHHHHHHhhCCCCCcccccccc-CeEEeccCCCcc--chhhhcc
Q 002970 166 RLRPAWEDLRSYLTARGRKRFEVYVCTMAER----DYALEMWRLLDPESNLINTKELL-DRIVCVKSGSRK--SLFNVFQ 238 (862)
Q Consensus 166 KLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R----~YA~~I~rlLDP~g~lFg~~~l~-~RIisres~~~K--sL~~lfp 238 (862)
++-||+.+|+.+|. ..-+.|+|.|+-.. .....-++-+. - ...+ +.++.+.+...| .+..|..
T Consensus 101 ~~~pg~~ell~~L~---~~G~~i~ivTgR~~~~~r~~T~~~L~~lG---i----~~~~~~~Lilr~~~~~K~~~r~~L~~ 170 (260)
T 3pct_A 101 AAIPGAVEFSNYVN---ANGGTMFFVSNRRDDVEKAGTVDDMKRLG---F----TGVNDKTLLLKKDKSNKSVRFKQVED 170 (260)
T ss_dssp EECTTHHHHHHHHH---HTTCEEEEEEEEETTTSHHHHHHHHHHHT---C----CCCSTTTEEEESSCSSSHHHHHHHHT
T ss_pred CCCccHHHHHHHHH---HCCCeEEEEeCCCccccHHHHHHHHHHcC---c----CccccceeEecCCCCChHHHHHHHHh
Confidence 34589999777776 56799999998754 45555555542 1 1111 256655333222 2334443
Q ss_pred CCCCCCcEEEEEcCC
Q 002970 239 DGTCHPKMALVIDDR 253 (862)
Q Consensus 239 ~~~~~~~~vVIIDDR 253 (862)
. .-+.++.|+|.
T Consensus 171 ~---gy~iv~~iGD~ 182 (260)
T 3pct_A 171 M---GYDIVLFVGDN 182 (260)
T ss_dssp T---TCEEEEEEESS
T ss_pred c---CCCEEEEECCC
Confidence 1 24678888886
No 148
>3nvb_A Uncharacterized protein; protein FKBH, protein fkbhstructural genomics, PSI-2, protei structure initiative; 1.71A {Bacteroides fragilis} PDB: 3slr_A
Probab=92.66 E-value=0.084 Score=58.51 Aligned_cols=80 Identities=11% Similarity=0.165 Sum_probs=49.1
Q ss_pred cChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCCCccchhhhccCCCCCCcEEE
Q 002970 169 PAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSGSRKSLFNVFQDGTCHPKMAL 248 (862)
Q Consensus 169 Pgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres~~~KsL~~lfp~~~~~~~~vV 248 (862)
|++.++++.|+ ..-+.+.|+|++.+.++..+++.. |+ .+|+..+++.-++..+. ....+..+...-...++-++
T Consensus 259 pgv~e~L~~Lk---~~Gi~laI~Snn~~~~v~~~l~~~-~~-~~l~l~~~~~v~~~~KP-Kp~~l~~al~~Lgl~pee~v 332 (387)
T 3nvb_A 259 TEFQEWVKKLK---NRGIIIAVCSKNNEGKAKEPFERN-PE-MVLKLDDIAVFVANWEN-KADNIRTIQRTLNIGFDSMV 332 (387)
T ss_dssp HHHHHHHHHHH---HTTCEEEEEEESCHHHHHHHHHHC-TT-CSSCGGGCSEEEEESSC-HHHHHHHHHHHHTCCGGGEE
T ss_pred HHHHHHHHHHH---HCCCEEEEEcCCCHHHHHHHHhhc-cc-cccCccCccEEEeCCCC-cHHHHHHHHHHhCcCcccEE
Confidence 78999777776 566999999999999999999763 11 12333333333333332 11223333222125667788
Q ss_pred EEcCCc
Q 002970 249 VIDDRL 254 (862)
Q Consensus 249 IIDDR~ 254 (862)
+|||+.
T Consensus 333 ~VGDs~ 338 (387)
T 3nvb_A 333 FLDDNP 338 (387)
T ss_dssp EECSCH
T ss_pred EECCCH
Confidence 888875
No 149
>2kou_A Dicer-like protein 4; ATP-binding, endonuclease, helicase, hydrolase, nuclease, nucleotide-binding, nucleus, RNA- binding; NMR {Arabidopsis thaliana}
Probab=92.63 E-value=0.28 Score=44.89 Aligned_cols=67 Identities=13% Similarity=0.111 Sum_probs=50.8
Q ss_pred CCchHHHHHHHHhcC------CCeEEEEeeecCCCceEEEEEEECC-----EEEEEeecCCHHHHHHHHHHHHHHHHHhh
Q 002970 610 ETPSGVLQDIAMKCG------TKVEFRPALVASTELQFSIEAWFAG-----EKIGEGIGRTRREAQRQAAEGSIKHLANV 678 (862)
Q Consensus 610 ~n~KS~LQE~~QK~~------~~l~Y~~v~~~~Hdk~Ftv~V~i~G-----~~~G~G~GkSKKeAEq~AA~~AL~~L~~~ 678 (862)
.+.++.|+.||++.- ..+.|........+..| ++|.+=. ...|.-+ +|||.|++.||-+|++.|-+.
T Consensus 4 ~sAi~lL~~yC~~Lp~d~~~~~~P~~~~~~~~~~~~~~-c~v~LP~~splr~i~g~~~-~sk~~AK~sAAf~Ac~~L~~~ 81 (102)
T 2kou_A 4 GSSISMMYKYCSRLPHDEFFQPKPEFQFKPVDEFGGTI-CRITLPANAPISEIESSLL-PSTEAAKKDACLKAVHELHNL 81 (102)
T ss_dssp SHHHHHHHHHHTTSSSCTTCCSSCEEEEEECCGGGCEE-EEEECCTTCSSCCEEEEEE-SSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCccccCccceEEEeEeecCCCeE-EEEECCCCCCCCeeeCCcc-ccHHHHHHHHHHHHHHHHHHC
Confidence 457899999998853 34688854333334567 8888765 5677777 999999999999999999763
No 150
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=92.62 E-value=0.08 Score=50.76 Aligned_cols=66 Identities=9% Similarity=0.098 Sum_probs=41.6
Q ss_pred HHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCCCccchhhhccCCCCCCcEEEEEcCC
Q 002970 174 LRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSGSRKSLFNVFQDGTCHPKMALVIDDR 253 (862)
Q Consensus 174 Lr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres~~~KsL~~lfp~~~~~~~~vVIIDDR 253 (862)
++..|+ ..-+.+.|.|++.+.++..+++.|.=+ +|. . .......|..+.......++-++.|.|+
T Consensus 47 ~l~~L~---~~g~~~~i~T~~~~~~~~~~~~~lgi~--~~~-----~-----~~~k~~~l~~~~~~~~~~~~~~~~vGD~ 111 (176)
T 3mmz_A 47 GIAALR---KSGLTMLILSTEQNPVVAARARKLKIP--VLH-----G-----IDRKDLALKQWCEEQGIAPERVLYVGND 111 (176)
T ss_dssp HHHHHH---HTTCEEEEEESSCCHHHHHHHHHHTCC--EEE-----S-----CSCHHHHHHHHHHHHTCCGGGEEEEECS
T ss_pred HHHHHH---HCCCeEEEEECcChHHHHHHHHHcCCe--eEe-----C-----CCChHHHHHHHHHHcCCCHHHEEEEcCC
Confidence 455776 556899999999999999999997655 444 1 1122222333332211455667777776
Q ss_pred c
Q 002970 254 L 254 (862)
Q Consensus 254 ~ 254 (862)
.
T Consensus 112 ~ 112 (176)
T 3mmz_A 112 V 112 (176)
T ss_dssp G
T ss_pred H
Confidence 4
No 151
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=92.56 E-value=0.096 Score=50.95 Aligned_cols=83 Identities=18% Similarity=0.269 Sum_probs=56.1
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccC-CCcc----chhhhccC
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKS-GSRK----SLFNVFQD 239 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres-~~~K----sL~~lfp~ 239 (862)
+++.|++.+++.+|+ ..-|.++|+|++.+.++..+++.+ +...+|+.+++.+. +..| -+..++..
T Consensus 93 ~~~~~~~~~~l~~l~---~~g~~~~i~t~~~~~~~~~~l~~~-------~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~ 162 (241)
T 2hoq_A 93 LREVPGARKVLIRLK---ELGYELGIITDGNPVKQWEKILRL-------ELDDFFEHVIISDFEGVKKPHPKIFKKALKA 162 (241)
T ss_dssp CCBCTTHHHHHHHHH---HHTCEEEEEECSCHHHHHHHHHHT-------TCGGGCSEEEEGGGGTCCTTCHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHH---HCCCEEEEEECCCchhHHHHHHHc-------CcHhhccEEEEeCCCCCCCCCHHHHHHHHHH
Confidence 456799999777776 445899999999999999998885 33455678887643 2222 22222221
Q ss_pred CCCCCcEEEEEcCCc--ccC
Q 002970 240 GTCHPKMALVIDDRL--KVW 257 (862)
Q Consensus 240 ~~~~~~~vVIIDDR~--dVW 257 (862)
....++-+++|+|+. |+-
T Consensus 163 ~g~~~~~~i~iGD~~~~Di~ 182 (241)
T 2hoq_A 163 FNVKPEEALMVGDRLYSDIY 182 (241)
T ss_dssp HTCCGGGEEEEESCTTTTHH
T ss_pred cCCCcccEEEECCCchHhHH
Confidence 125677899999985 453
No 152
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=92.21 E-value=0.24 Score=47.37 Aligned_cols=78 Identities=13% Similarity=0.234 Sum_probs=49.7
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCC---------------cHHHHHHHHHhhCCCCCccccccccCeE-Ee----
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMA---------------ERDYALEMWRLLDPESNLINTKELLDRI-VC---- 224 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG---------------~R~YA~~I~rlLDP~g~lFg~~~l~~RI-is---- 224 (862)
+++.|++.+++..|+ ..-|.+.|+|++ .+.++..+++.++-. | +.| +|
T Consensus 41 ~~~~pg~~e~L~~L~---~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~---f------d~v~~s~~~~ 108 (176)
T 2fpr_A 41 LAFEPGVIPQLLKLQ---KAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ---F------DEVLICPHLP 108 (176)
T ss_dssp CCBCTTHHHHHHHHH---HTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC---E------EEEEEECCCG
T ss_pred CcCCccHHHHHHHHH---HCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC---e------eEEEEcCCCC
Confidence 456799999777776 456999999999 688888888876532 4 455 45
Q ss_pred -ccCC----CccchhhhccCCCCCCcEEEEEcCCc
Q 002970 225 -VKSG----SRKSLFNVFQDGTCHPKMALVIDDRL 254 (862)
Q Consensus 225 -res~----~~KsL~~lfp~~~~~~~~vVIIDDR~ 254 (862)
-+.+ +..-+..++......++-+++|+|+.
T Consensus 109 ~~~~~~~KP~p~~~~~~~~~~gi~~~~~l~VGD~~ 143 (176)
T 2fpr_A 109 ADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRA 143 (176)
T ss_dssp GGCCSSSTTSCGGGGGGC----CCGGGCEEEESSH
T ss_pred cccccccCCCHHHHHHHHHHcCCCHHHEEEEcCCH
Confidence 2222 12223444332224567788888875
No 153
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=91.90 E-value=0.08 Score=51.32 Aligned_cols=31 Identities=6% Similarity=-0.112 Sum_probs=25.9
Q ss_pred HHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhC
Q 002970 174 LRSYLTARGRKRFEVYVCTMAERDYALEMWRLLD 207 (862)
Q Consensus 174 Lr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLD 207 (862)
++..|+ ..-+.+.|.|++.+.++..+++.+.
T Consensus 54 ~l~~L~---~~g~~~~i~T~~~~~~~~~~~~~lg 84 (189)
T 3mn1_A 54 GIKMLI---ASGVTTAIISGRKTAIVERRAKSLG 84 (189)
T ss_dssp HHHHHH---HTTCEEEEECSSCCHHHHHHHHHHT
T ss_pred HHHHHH---HCCCEEEEEECcChHHHHHHHHHcC
Confidence 455676 4568999999999999999999864
No 154
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*
Probab=91.87 E-value=0.12 Score=56.90 Aligned_cols=76 Identities=13% Similarity=0.153 Sum_probs=48.5
Q ss_pred eCcChHHHHHHHhhhccccEEEEEEeCCc---------H---HHHHHHHHhhCCCCCccccccccCeEEeccCC-Cccc-
Q 002970 167 LRPAWEDLRSYLTARGRKRFEVYVCTMAE---------R---DYALEMWRLLDPESNLINTKELLDRIVCVKSG-SRKS- 232 (862)
Q Consensus 167 LRPgv~eLr~FL~a~~sk~FEl~VyTmG~---------R---~YA~~I~rlLDP~g~lFg~~~l~~RIisres~-~~Ks- 232 (862)
+-|++.+++..|+ ..-|.|.|.||.. . .++..+++.+.- .| +-|+|.++. ..|-
T Consensus 88 ~~pgv~e~L~~L~---~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl---~f------d~i~~~~~~~~~KP~ 155 (416)
T 3zvl_A 88 LYPEIPKKLQELA---AEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGV---PF------QVLVATHAGLNRKPV 155 (416)
T ss_dssp SCTTHHHHHHHHH---HTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTS---CC------EEEEECSSSTTSTTS
T ss_pred hcccHHHHHHHHH---HCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCC---CE------EEEEECCCCCCCCCC
Confidence 5699999878776 5569999999966 3 346777766532 24 467776443 2221
Q ss_pred ---hhhhccCC----CCCCcEEEEEcCCc
Q 002970 233 ---LFNVFQDG----TCHPKMALVIDDRL 254 (862)
Q Consensus 233 ---L~~lfp~~----~~~~~~vVIIDDR~ 254 (862)
+..++... ..+++-+++|+|+.
T Consensus 156 p~~~~~a~~~l~~~~~v~~~~~l~VGDs~ 184 (416)
T 3zvl_A 156 SGMWDHLQEQANEGIPISVEDSVFVGDAA 184 (416)
T ss_dssp SHHHHHHHHHSSTTCCCCGGGCEEECSCS
T ss_pred HHHHHHHHHHhCCCCCCCHHHeEEEECCC
Confidence 22222211 15678899999986
No 155
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=91.75 E-value=0.14 Score=48.94 Aligned_cols=38 Identities=11% Similarity=-0.181 Sum_probs=29.4
Q ss_pred cChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCC
Q 002970 169 PAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPE 209 (862)
Q Consensus 169 Pgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~ 209 (862)
|...++++.|+ .+-+.++|+|+..+.++..+++.+.-+
T Consensus 38 ~~~~~~l~~L~---~~G~~~~i~Tg~~~~~~~~~~~~lgl~ 75 (180)
T 1k1e_A 38 VRDGLGIKMLM---DADIQVAVLSGRDSPILRRRIADLGIK 75 (180)
T ss_dssp HHHHHHHHHHH---HTTCEEEEEESCCCHHHHHHHHHHTCC
T ss_pred cchHHHHHHHH---HCCCeEEEEeCCCcHHHHHHHHHcCCc
Confidence 44556566675 456899999999999999999987543
No 156
>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A
Probab=91.11 E-value=0.15 Score=51.33 Aligned_cols=85 Identities=13% Similarity=0.138 Sum_probs=56.9
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccC-CCcc----chhhhccC
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKS-GSRK----SLFNVFQD 239 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres-~~~K----sL~~lfp~ 239 (862)
+++.|++.+++..|+ . .|.+.|+|++.+.++..+++.+ +...+|+.|++.++ +..| -+..++..
T Consensus 120 ~~~~~g~~~~L~~L~---~-~~~l~i~Tn~~~~~~~~~l~~~-------gl~~~f~~i~~~~~~~~~KP~p~~~~~~~~~ 188 (260)
T 2gfh_A 120 MILADDVKAMLTELR---K-EVRLLLLTNGDRQTQREKIEAC-------ACQSYFDAIVIGGEQKEEKPAPSIFYHCCDL 188 (260)
T ss_dssp CCCCHHHHHHHHHHH---T-TSEEEEEECSCHHHHHHHHHHH-------TCGGGCSEEEEGGGSSSCTTCHHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHH---c-CCcEEEEECcChHHHHHHHHhc-------CHHhhhheEEecCCCCCCCCCHHHHHHHHHH
Confidence 456799999777775 2 4999999999999999998884 44455678877643 2222 22222221
Q ss_pred CCCCCcEEEEEcCC--cccCCCC
Q 002970 240 GTCHPKMALVIDDR--LKVWDDK 260 (862)
Q Consensus 240 ~~~~~~~vVIIDDR--~dVW~~~ 260 (862)
....++-+|+|+|+ .||-...
T Consensus 189 ~~~~~~~~~~vGDs~~~Di~~A~ 211 (260)
T 2gfh_A 189 LGVQPGDCVMVGDTLETDIQGGL 211 (260)
T ss_dssp HTCCGGGEEEEESCTTTHHHHHH
T ss_pred cCCChhhEEEECCCchhhHHHHH
Confidence 12567789999994 5665444
No 157
>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6
Probab=90.69 E-value=0.54 Score=44.70 Aligned_cols=80 Identities=11% Similarity=0.031 Sum_probs=50.6
Q ss_pred EeeCcChHHHHHHHhhhccc-cEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-C-ccc----hhhhc
Q 002970 165 VRLRPAWEDLRSYLTARGRK-RFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-S-RKS----LFNVF 237 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk-~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres~-~-~Ks----L~~lf 237 (862)
+++.|++.+++.+|+ .. -+.+.|+|++.+.++..+++.+.-. .+|+-+++.++. . .|. +..+.
T Consensus 92 ~~~~~~~~~~l~~l~---~~~g~~~~i~t~~~~~~~~~~l~~~~l~-------~~f~~~~~~~~~~~~~k~~~~~~~~~~ 161 (234)
T 2hcf_A 92 ITLLEGVRELLDALS---SRSDVLLGLLTGNFEASGRHKLKLPGID-------HYFPFGAFADDALDRNELPHIALERAR 161 (234)
T ss_dssp EEECTTHHHHHHHHH---TCTTEEEEEECSSCHHHHHHHHHTTTCS-------TTCSCEECTTTCSSGGGHHHHHHHHHH
T ss_pred CCcCCCHHHHHHHHH---hCCCceEEEEcCCcHHHHHHHHHHCCch-------hhcCcceecCCCcCccchHHHHHHHHH
Confidence 567899999777775 34 5999999999999999998886432 233345544332 1 121 22222
Q ss_pred cCCC--CCCcEEEEEcCCc
Q 002970 238 QDGT--CHPKMALVIDDRL 254 (862)
Q Consensus 238 p~~~--~~~~~vVIIDDR~ 254 (862)
.... ..++-+++|+|+.
T Consensus 162 ~~lg~~~~~~~~i~iGD~~ 180 (234)
T 2hcf_A 162 RMTGANYSPSQIVIIGDTE 180 (234)
T ss_dssp HHHCCCCCGGGEEEEESSH
T ss_pred HHhCCCCCcccEEEECCCH
Confidence 1111 3567788888885
No 158
>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}
Probab=90.51 E-value=0.13 Score=51.57 Aligned_cols=32 Identities=13% Similarity=-0.049 Sum_probs=26.4
Q ss_pred HHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCC
Q 002970 174 LRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDP 208 (862)
Q Consensus 174 Lr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP 208 (862)
++..|+ ..-|.+.|.|...+..|..+++.|.=
T Consensus 84 ~L~~L~---~~G~~l~I~T~~~~~~~~~~l~~lgi 115 (211)
T 3ij5_A 84 GIRCLI---TSDIDVAIITGRRAKLLEDRANTLGI 115 (211)
T ss_dssp HHHHHH---HTTCEEEEECSSCCHHHHHHHHHHTC
T ss_pred HHHHHH---HCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 455776 45689999999999999999998643
No 159
>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24
Probab=90.25 E-value=0.071 Score=55.99 Aligned_cols=36 Identities=17% Similarity=0.206 Sum_probs=29.7
Q ss_pred eCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhh
Q 002970 167 LRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLL 206 (862)
Q Consensus 167 LRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlL 206 (862)
++|++.+++.+|+ . -+.+.|+|...+.|+..+++.+
T Consensus 104 ~~~~~~~~l~~l~---~-g~~~~i~t~~~~~~~~~~~~~~ 139 (332)
T 1y8a_A 104 FVPDAEKAMATLQ---E-RWTPVVISTSYTQYLRRTASMI 139 (332)
T ss_dssp BCTTHHHHHHHHH---T-TCEEEEEEEEEHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHH---c-CCcEEEEECCceEEEcccchhh
Confidence 4589999888887 3 6789999999999998887664
No 160
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=90.02 E-value=0.33 Score=58.92 Aligned_cols=66 Identities=17% Similarity=0.285 Sum_probs=52.5
Q ss_pred CCCCchHHHHHHHHhcCCCeEEEEeee--------cCC-----C-ceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHH
Q 002970 608 STETPSGVLQDIAMKCGTKVEFRPALV--------AST-----E-LQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIK 673 (862)
Q Consensus 608 ~~~n~KS~LQE~~QK~~~~l~Y~~v~~--------~~H-----d-k~Ftv~V~i~G~~~G~G~GkSKKeAEq~AA~~AL~ 673 (862)
++-+||..++ ||.|.+..|++.+. |+- - -.|.+.+.+-+-.+-.|.=+-||.|||.||+.||+
T Consensus 15 ~~~~pk~~~~---q~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~lp~~~~~~~~~~~kkd~eq~aa~~al~ 91 (950)
T 3htx_A 15 HTPTPKAIIH---QKFGAKASYTVEEVHDSSQSGCPGLAIPQKGPCLYRCHLQLPEFSVVSNVFKKKKDSEQSAAELALD 91 (950)
T ss_dssp CCCCCHHHHH---HTTGGGSEEEEEEECCSCSCCCTTCCSCCCCCCEEEEEEECSSCEEECCCBSCHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHH---HHhCcceeeeehhhhcccCCCCCccccCCCCCeeEEEEeeCCCceEecchhhccccHHHHHHHHHHH
Confidence 4668998865 77888889977543 121 2 38999999988766689999999999999999999
Q ss_pred HHH
Q 002970 674 HLA 676 (862)
Q Consensus 674 ~L~ 676 (862)
+|.
T Consensus 92 ~~g 94 (950)
T 3htx_A 92 KLG 94 (950)
T ss_dssp TTT
T ss_pred HhC
Confidence 994
No 161
>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A
Probab=89.86 E-value=0.081 Score=52.58 Aligned_cols=37 Identities=11% Similarity=0.046 Sum_probs=27.9
Q ss_pred eCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhh
Q 002970 167 LRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLL 206 (862)
Q Consensus 167 LRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlL 206 (862)
..|++.++++.|+ .+-|.+.|.|++.+.++..+++.|
T Consensus 89 ~~~~~~e~l~~L~---~~G~~l~ivTn~~~~~~~~~l~~l 125 (211)
T 2b82_A 89 PKEVARQLIDMHV---RRGDAIFFVTGRSPTKTETVSKTL 125 (211)
T ss_dssp ECHHHHHHHHHHH---HHTCEEEEEECSCCCSSCCHHHHH
T ss_pred CcHHHHHHHHHHH---HCCCEEEEEcCCcHHHHHHHHHHH
Confidence 3578888777776 456899999999887766666554
No 162
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=89.42 E-value=0.075 Score=46.86 Aligned_cols=79 Identities=13% Similarity=0.189 Sum_probs=50.8
Q ss_pred eCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccC-CCcc----chhhhccCCC
Q 002970 167 LRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKS-GSRK----SLFNVFQDGT 241 (862)
Q Consensus 167 LRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres-~~~K----sL~~lfp~~~ 241 (862)
+.|++.++++.|+ ..-+.+.|+|++.+.++..+++.+ +...+++.|++.+. +..| -+..++....
T Consensus 19 ~~~~~~~~l~~L~---~~G~~~~i~S~~~~~~~~~~l~~~-------~l~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~ 88 (137)
T 2pr7_A 19 DQRRWRNLLAAAK---KNGVGTVILSNDPGGLGAAPIREL-------ETNGVVDKVLLSGELGVEKPEEAAFQAAADAID 88 (137)
T ss_dssp HHHHHHHHHHHHH---HTTCEEEEEECSCCGGGGHHHHHH-------HHTTSSSEEEEHHHHSCCTTSHHHHHHHHHHTT
T ss_pred cCccHHHHHHHHH---HCCCEEEEEeCCCHHHHHHHHHHC-------ChHhhccEEEEeccCCCCCCCHHHHHHHHHHcC
Confidence 3478988666665 345999999999999998888874 33345567777532 2122 2222322222
Q ss_pred CCCcEEEEEcCCcc
Q 002970 242 CHPKMALVIDDRLK 255 (862)
Q Consensus 242 ~~~~~vVIIDDR~d 255 (862)
..++-+++|+|+..
T Consensus 89 ~~~~~~~~vgD~~~ 102 (137)
T 2pr7_A 89 LPMRDCVLVDDSIL 102 (137)
T ss_dssp CCGGGEEEEESCHH
T ss_pred CCcccEEEEcCCHH
Confidence 45677888999863
No 163
>2db2_A KIAA0890 protein; DSRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.79 E-value=0.82 Score=42.98 Aligned_cols=67 Identities=15% Similarity=0.224 Sum_probs=48.9
Q ss_pred CchHHHHHHHHhcCC-----C-eEEEEeeecCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHhh
Q 002970 611 TPSGVLQDIAMKCGT-----K-VEFRPALVASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLANV 678 (862)
Q Consensus 611 n~KS~LQE~~QK~~~-----~-l~Y~~v~~~~Hdk~Ftv~V~i~G~~~G~G~GkSKKeAEq~AA~~AL~~L~~~ 678 (862)
-||+.|.--.|+--. . +.|... +....+.-|+.+.+---.--+|.|+.|-|||.+||..|+++|+.-
T Consensus 18 ~PKnLL~~ViqrA~~ss~~kd~l~~~~t-~g~k~K~~tl~l~WP~~mef~a~G~rK~eAE~kAAA~AC~kLK~L 90 (119)
T 2db2_A 18 QPKNLLNSVIGRALGISHAKDKLVYVHT-NGPKKKKVTLHIKWPKSVEVEGYGSKKIDAERQAAAAACQLFKGW 90 (119)
T ss_dssp CHHHHHHHHHHHHTTHHHHHHHEEEEEC-CSSSSEEEEEEECSSSCEEEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHccCchhhheeEEee-cCCceeEEEEEecCCCcEEEEeeccchHHHHHHHHHHHHHHHHHc
Confidence 489999998887431 1 334321 112346677777777766669999999999999999999999874
No 164
>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13
Probab=87.26 E-value=0.34 Score=53.38 Aligned_cols=52 Identities=15% Similarity=0.061 Sum_probs=41.2
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccC--eEEecc
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLD--RIVCVK 226 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~--RIisre 226 (862)
+++.||+.+++..|+ ++-|.+.|.|++.+.++..+++.+ +...+|+ .|+|-+
T Consensus 214 ~~l~pGv~elL~~Lk---~~Gi~laIvTn~~~~~~~~~L~~l-------gL~~~Fd~~~Ivs~d 267 (384)
T 1qyi_A 214 LRPVDEVKVLLNDLK---GAGFELGIATGRPYTETVVPFENL-------GLLPYFEADFIATAS 267 (384)
T ss_dssp SSCHHHHHHHHHHHH---HTTCEEEEECSSCHHHHHHHHHHH-------TCGGGSCGGGEECHH
T ss_pred CCcCcCHHHHHHHHH---hCCCEEEEEeCCcHHHHHHHHHHc-------CChHhcCCCEEEecc
Confidence 577899999888886 456999999999999999999885 3334555 888853
No 165
>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6
Probab=86.77 E-value=0.86 Score=42.65 Aligned_cols=79 Identities=9% Similarity=0.156 Sum_probs=52.2
Q ss_pred eeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-C----ccchhhhccCC
Q 002970 166 RLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-S----RKSLFNVFQDG 240 (862)
Q Consensus 166 KLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres~-~----~KsL~~lfp~~ 240 (862)
.+.|++.+++.+|+ ..-+.++|+|++.+.++..+++.++ ....++.+++.+.. . ...+..++...
T Consensus 94 ~~~~~~~~~l~~l~---~~g~~~~i~t~~~~~~~~~~l~~~~-------~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~ 163 (226)
T 1te2_A 94 PLLPGVREAVALCK---EQGLLVGLASASPLHMLEKVLTMFD-------LRDSFDALASAEKLPYSKPHPQVYLDCAAKL 163 (226)
T ss_dssp CBCTTHHHHHHHHH---HTTCEEEEEESSCHHHHHHHHHHTT-------CGGGCSEEEECTTSSCCTTSTHHHHHHHHHH
T ss_pred CcCccHHHHHHHHH---HCCCcEEEEeCCcHHHHHHHHHhcC-------cHhhCcEEEeccccCCCCCChHHHHHHHHHc
Confidence 45689999777775 3458999999999999999888753 33445677775432 1 12233333221
Q ss_pred CCCCcEEEEEcCCc
Q 002970 241 TCHPKMALVIDDRL 254 (862)
Q Consensus 241 ~~~~~~vVIIDDR~ 254 (862)
...++-++.|+|+.
T Consensus 164 ~i~~~~~i~iGD~~ 177 (226)
T 1te2_A 164 GVDPLTCVALEDSV 177 (226)
T ss_dssp TSCGGGEEEEESSH
T ss_pred CCCHHHeEEEeCCH
Confidence 25667788888875
No 166
>2db2_A KIAA0890 protein; DSRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=86.71 E-value=0.47 Score=44.57 Aligned_cols=37 Identities=24% Similarity=0.188 Sum_probs=30.4
Q ss_pred EEEEEEC---CEEEeeeecCCHHHHHHHHHHHHHHHhhccc
Q 002970 778 YAQVEID---GQVLGKGIGSTWDEAKMQAAEKALGSLRSMF 815 (862)
Q Consensus 778 ~aqV~Id---GkvyG~GtGsSKKeAKqqAAe~AL~aL~~~~ 815 (862)
.+++++- --+| +|.|+.|.||+.+||.+|+..|++.-
T Consensus 52 ~~tl~l~WP~~mef-~a~G~rK~eAE~kAAA~AC~kLK~Lg 91 (119)
T 2db2_A 52 KVTLHIKWPKSVEV-EGYGSKKIDAERQAAAAACQLFKGWG 91 (119)
T ss_dssp EEEEEECSSSCEEE-EEEESSHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEecCCCcEEE-EeeccchHHHHHHHHHHHHHHHHHcC
Confidence 5566663 4566 89999999999999999999998753
No 167
>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}
Probab=86.66 E-value=0.29 Score=48.35 Aligned_cols=30 Identities=13% Similarity=0.065 Sum_probs=25.0
Q ss_pred HHHHhhhccccEEEEEEeCCcHHHHHHHHHhhC
Q 002970 175 RSYLTARGRKRFEVYVCTMAERDYALEMWRLLD 207 (862)
Q Consensus 175 r~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLD 207 (862)
+.+|+ ..-|.+.|.|++.+..+..+++.|.
T Consensus 61 l~~L~---~~G~~~~ivT~~~~~~~~~~l~~lg 90 (195)
T 3n07_A 61 VKALM---NAGIEIAIITGRRSQIVENRMKALG 90 (195)
T ss_dssp HHHHH---HTTCEEEEECSSCCHHHHHHHHHTT
T ss_pred HHHHH---HCCCEEEEEECcCHHHHHHHHHHcC
Confidence 34665 4568999999999999999999865
No 168
>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}
Probab=86.05 E-value=0.39 Score=45.01 Aligned_cols=78 Identities=22% Similarity=0.230 Sum_probs=50.9
Q ss_pred eeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccC-C----CccchhhhccCC
Q 002970 166 RLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKS-G----SRKSLFNVFQDG 240 (862)
Q Consensus 166 KLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres-~----~~KsL~~lfp~~ 240 (862)
++.|++.+++.+|+ ... .++|+|++.+.++..+++.++ ...+++.|++.+. + +..-+..++...
T Consensus 86 ~~~~~~~~~l~~l~---~~g-~~~i~s~~~~~~~~~~l~~~~-------~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~ 154 (200)
T 3cnh_A 86 QPRPEVLALARDLG---QRY-RMYSLNNEGRDLNEYRIRTFG-------LGEFLLAFFTSSALGVMKPNPAMYRLGLTLA 154 (200)
T ss_dssp CBCHHHHHHHHHHT---TTS-EEEEEECCCHHHHHHHHHHHT-------GGGTCSCEEEHHHHSCCTTCHHHHHHHHHHH
T ss_pred ccCccHHHHHHHHH---HcC-CEEEEeCCcHHHHHHHHHhCC-------HHHhcceEEeecccCCCCCCHHHHHHHHHHc
Confidence 36799999777775 344 999999999999999988753 3345567777532 1 111222222211
Q ss_pred CCCCcEEEEEcCCc
Q 002970 241 TCHPKMALVIDDRL 254 (862)
Q Consensus 241 ~~~~~~vVIIDDR~ 254 (862)
...++-+++|+|+.
T Consensus 155 ~~~~~~~~~vgD~~ 168 (200)
T 3cnh_A 155 QVRPEEAVMVDDRL 168 (200)
T ss_dssp TCCGGGEEEEESCH
T ss_pred CCCHHHeEEeCCCH
Confidence 25667788889985
No 169
>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}
Probab=85.65 E-value=0.74 Score=43.52 Aligned_cols=80 Identities=11% Similarity=0.164 Sum_probs=53.6
Q ss_pred eCcChHHHHHHHhhhccccEEEEEEeCCc---HHHHHHHHHhhCCCCCccccccccCeEEeccC-C----Cccchhhhcc
Q 002970 167 LRPAWEDLRSYLTARGRKRFEVYVCTMAE---RDYALEMWRLLDPESNLINTKELLDRIVCVKS-G----SRKSLFNVFQ 238 (862)
Q Consensus 167 LRPgv~eLr~FL~a~~sk~FEl~VyTmG~---R~YA~~I~rlLDP~g~lFg~~~l~~RIisres-~----~~KsL~~lfp 238 (862)
+.|++.+++.+|+ ..-+.+.|+|++. +.++..+++.+ +...+++.+++.++ + ...-+..+..
T Consensus 100 ~~~~~~~~l~~l~---~~g~~~~i~t~~~~~~~~~~~~~l~~~-------~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~ 169 (235)
T 2om6_A 100 VLEGTKEALQFVK---ERGLKTAVIGNVMFWPGSYTRLLLERF-------GLMEFIDKTFFADEVLSYKPRKEMFEKVLN 169 (235)
T ss_dssp BCTTHHHHHHHHH---HTTCEEEEEECCCSSCHHHHHHHHHHT-------TCGGGCSEEEEHHHHTCCTTCHHHHHHHHH
T ss_pred cCccHHHHHHHHH---HCCCEEEEEcCCcccchhHHHHHHHhC-------CcHHHhhhheeccccCCCCCCHHHHHHHHH
Confidence 3689999777776 3458999999999 99998888875 33445667877532 1 1122222222
Q ss_pred CCCCCCcEEEEEcCCc--cc
Q 002970 239 DGTCHPKMALVIDDRL--KV 256 (862)
Q Consensus 239 ~~~~~~~~vVIIDDR~--dV 256 (862)
.....++-++.|+|+. |+
T Consensus 170 ~lgi~~~~~~~iGD~~~nDi 189 (235)
T 2om6_A 170 SFEVKPEESLHIGDTYAEDY 189 (235)
T ss_dssp HTTCCGGGEEEEESCTTTTH
T ss_pred HcCCCccceEEECCChHHHH
Confidence 2225678899999986 45
No 170
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=85.25 E-value=1.5 Score=47.21 Aligned_cols=38 Identities=21% Similarity=0.186 Sum_probs=34.9
Q ss_pred eeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhh
Q 002970 166 RLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLL 206 (862)
Q Consensus 166 KLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlL 206 (862)
++.|...+|...|+ ..-|++||+|.+.+.+...++..+
T Consensus 143 ~~~~~~~~l~~~l~---~~G~~v~ivSas~~~~v~~~a~~~ 180 (327)
T 4as2_A 143 RVFSGQRELYNKLM---ENGIEVYVISAAHEELVRMVAADP 180 (327)
T ss_dssp EECHHHHHHHHHHH---HTTCEEEEEEEEEHHHHHHHHTCG
T ss_pred ccCHHHHHHHHHHH---HCCCEEEEEeCCcHHHHHHHHhhc
Confidence 77899999999998 788999999999999999999875
No 171
>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=84.62 E-value=1.4 Score=41.17 Aligned_cols=79 Identities=16% Similarity=0.118 Sum_probs=51.8
Q ss_pred eeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-Cc----cchhhhccCC
Q 002970 166 RLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-SR----KSLFNVFQDG 240 (862)
Q Consensus 166 KLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres~-~~----KsL~~lfp~~ 240 (862)
.+.|++.+++.+|+ ..-+.+.|+|++.+.++..+++.++ ....++.+++.+.. .. ..+..+....
T Consensus 89 ~~~~~~~~~l~~l~---~~g~~~~i~s~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~ 158 (225)
T 3d6j_A 89 ILFPDTLPTLTHLK---KQGIRIGIISTKYRFRILSFLRNHM-------PDDWFDIIIGGEDVTHHKPDPEGLLLAIDRL 158 (225)
T ss_dssp EECTTHHHHHHHHH---HHTCEEEEECSSCHHHHHHHHHTSS-------CTTCCSEEECGGGCSSCTTSTHHHHHHHHHT
T ss_pred ccCcCHHHHHHHHH---HCCCeEEEEECCCHHHHHHHHHHcC-------chhheeeeeehhhcCCCCCChHHHHHHHHHh
Confidence 45689999777776 3458899999999999999888753 22344577765431 11 2233333222
Q ss_pred CCCCcEEEEEcCCc
Q 002970 241 TCHPKMALVIDDRL 254 (862)
Q Consensus 241 ~~~~~~vVIIDDR~ 254 (862)
...++-++.|+|+.
T Consensus 159 ~~~~~~~i~iGD~~ 172 (225)
T 3d6j_A 159 KACPEEVLYIGDST 172 (225)
T ss_dssp TCCGGGEEEEESSH
T ss_pred CCChHHeEEEcCCH
Confidence 25667788888875
No 172
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=83.22 E-value=1.1 Score=41.87 Aligned_cols=78 Identities=15% Similarity=0.148 Sum_probs=47.5
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcH---------------HHHHHHHHhhCCCCCccccccccCeEE-ec---
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAER---------------DYALEMWRLLDPESNLINTKELLDRIV-CV--- 225 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R---------------~YA~~I~rlLDP~g~lFg~~~l~~RIi-sr--- 225 (862)
+++.|++.+++..|+ .+-|.+.|+|++.+ .++..+++.+. .+|. .++ |.
T Consensus 26 ~~~~~g~~~~l~~L~---~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g---~~~~------~~~~~~~~~ 93 (179)
T 3l8h_A 26 WIALPGSLQAIARLT---QADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMG---GVVD------AIFMCPHGP 93 (179)
T ss_dssp CCBCTTHHHHHHHHH---HTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTT---CCCC------EEEEECCCT
T ss_pred ceECcCHHHHHHHHH---HCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCC---Ccee------EEEEcCCCC
Confidence 456699999777776 45699999999997 56666666654 3444 433 32
Q ss_pred -cC-CCcc----chhhhccCCCCCCcEEEEEcCCc
Q 002970 226 -KS-GSRK----SLFNVFQDGTCHPKMALVIDDRL 254 (862)
Q Consensus 226 -es-~~~K----sL~~lfp~~~~~~~~vVIIDDR~ 254 (862)
++ +..| -+..++......++-+++|+|+.
T Consensus 94 ~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~vGD~~ 128 (179)
T 3l8h_A 94 DDGCACRKPLPGMYRDIARRYDVDLAGVPAVGDSL 128 (179)
T ss_dssp TSCCSSSTTSSHHHHHHHHHHTCCCTTCEEEESSH
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCCHHHEEEECCCH
Confidence 11 1122 12222221125677788899875
No 173
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=82.97 E-value=1.8 Score=44.53 Aligned_cols=40 Identities=20% Similarity=0.288 Sum_probs=35.5
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhC
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLD 207 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLD 207 (862)
+++||++.++..+|+ ..-+.++|.|-|....|..|++-+-
T Consensus 140 i~l~~g~~e~i~~l~---~~gi~v~ivSgg~~~~i~~i~~~~g 179 (297)
T 4fe3_A 140 VMLKEGYENFFGKLQ---QHGIPVFIFSAGIGDVLEEVIRQAG 179 (297)
T ss_dssp CCBCBTHHHHHHHHH---HTTCCEEEEEEEEHHHHHHHHHHTT
T ss_pred CCCCCcHHHHHHHHH---HcCCeEEEEeCCcHHHHHHHHHHcC
Confidence 689999999888887 5668999999999999999999863
No 174
>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=76.00 E-value=1.3 Score=43.93 Aligned_cols=12 Identities=33% Similarity=0.612 Sum_probs=11.0
Q ss_pred eEEEeCcchhhh
Q 002970 49 GIVFDLDETLIV 60 (862)
Q Consensus 49 ~lV~DLDeTLi~ 60 (862)
.|+|||||||+.
T Consensus 14 li~~DlDGTLl~ 25 (268)
T 3r4c_A 14 VLLLDVDGTLLS 25 (268)
T ss_dssp EEEECSBTTTBC
T ss_pred EEEEeCCCCCcC
Confidence 489999999996
No 175
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=74.75 E-value=3 Score=42.63 Aligned_cols=73 Identities=12% Similarity=0.092 Sum_probs=49.3
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCCCccchhhhccCCCCCC
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSGSRKSLFNVFQDGTCHP 244 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres~~~KsL~~lfp~~~~~~ 244 (862)
.+++|++.+++.+|+ ..-+.+.|+|++.+.++..+++.+.= ..+|..|+. .+..+.++.+- ..
T Consensus 162 ~~~~~g~~~~l~~L~---~~g~~~~i~T~~~~~~~~~~l~~~gl-------~~~f~~i~~--~~K~~~~~~l~----~~- 224 (287)
T 3a1c_A 162 DTLKESAKPAVQELK---RMGIKVGMITGDNWRSAEAISRELNL-------DLVIAEVLP--HQKSEEVKKLQ----AK- 224 (287)
T ss_dssp CCBCTTHHHHHHHHH---HTTCEEEEECSSCHHHHHHHHHHHTC-------SEEECSCCT--TCHHHHHHHHT----TT-
T ss_pred cccchhHHHHHHHHH---HCCCeEEEEeCCCHHHHHHHHHHhCC-------ceeeeecCh--HHHHHHHHHHh----cC-
Confidence 478999999888886 45689999999999999999998642 222333431 12223344443 23
Q ss_pred cEEEEEcCCc
Q 002970 245 KMALVIDDRL 254 (862)
Q Consensus 245 ~~vVIIDDR~ 254 (862)
+-+++|.|+.
T Consensus 225 ~~~~~vGDs~ 234 (287)
T 3a1c_A 225 EVVAFVGDGI 234 (287)
T ss_dssp CCEEEEECTT
T ss_pred CeEEEEECCH
Confidence 6677888864
No 176
>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18
Probab=73.17 E-value=1.8 Score=39.62 Aligned_cols=14 Identities=50% Similarity=0.669 Sum_probs=11.9
Q ss_pred eEEEeCcchhhhhc
Q 002970 49 GIVFDLDETLIVAN 62 (862)
Q Consensus 49 ~lV~DLDeTLi~a~ 62 (862)
.|+|||||||+...
T Consensus 3 ~i~~DlDGTL~~~~ 16 (126)
T 1xpj_A 3 KLIVDLDGTLTQAN 16 (126)
T ss_dssp EEEECSTTTTBCCC
T ss_pred EEEEecCCCCCCCC
Confidence 58899999999754
No 177
>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*
Probab=72.99 E-value=0.85 Score=45.61 Aligned_cols=15 Identities=33% Similarity=0.414 Sum_probs=12.7
Q ss_pred eeEEEeCcchhhhhc
Q 002970 48 LGIVFDLDETLIVAN 62 (862)
Q Consensus 48 L~lV~DLDeTLi~a~ 62 (862)
|.|+|||||||+...
T Consensus 1 ~li~~DlDGTLl~~~ 15 (259)
T 3zx4_A 1 MIVFTDLDGTLLDER 15 (259)
T ss_dssp CEEEECCCCCCSCSS
T ss_pred CEEEEeCCCCCcCCC
Confidence 468999999999765
No 178
>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}
Probab=72.85 E-value=1.9 Score=43.53 Aligned_cols=16 Identities=25% Similarity=0.250 Sum_probs=13.1
Q ss_pred ceeEEEeCcchhhhhc
Q 002970 47 CLGIVFDLDETLIVAN 62 (862)
Q Consensus 47 ~L~lV~DLDeTLi~a~ 62 (862)
.-.|+|||||||+...
T Consensus 22 ~kliifDlDGTLlds~ 37 (289)
T 3gyg_A 22 QYIVFCDFDETYFPHT 37 (289)
T ss_dssp SEEEEEETBTTTBCSS
T ss_pred CeEEEEECCCCCcCCC
Confidence 3569999999999743
No 179
>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14
Probab=72.36 E-value=1.4 Score=41.93 Aligned_cols=14 Identities=29% Similarity=0.600 Sum_probs=12.1
Q ss_pred eEEEeCcchhhhhc
Q 002970 49 GIVFDLDETLIVAN 62 (862)
Q Consensus 49 ~lV~DLDeTLi~a~ 62 (862)
+|+|||||||+...
T Consensus 5 ~i~fDlDGTLl~~~ 18 (250)
T 2c4n_A 5 NVICDIDGVLMHDN 18 (250)
T ss_dssp EEEEECBTTTEETT
T ss_pred EEEEcCcceEEeCC
Confidence 68999999999654
No 180
>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}
Probab=72.07 E-value=1.9 Score=43.79 Aligned_cols=31 Identities=23% Similarity=0.208 Sum_probs=19.9
Q ss_pred eeEEEeCcchhhhhccccchHHHHHHHHhhh
Q 002970 48 LGIVFDLDETLIVANTMRSFEDRIEALLRKI 78 (862)
Q Consensus 48 L~lV~DLDeTLi~a~t~~~~e~ri~~l~~~~ 78 (862)
=.|+|||||||+....-.--+..+++|+++.
T Consensus 22 kli~~DlDGTLl~~~~~~i~~~~~~al~~l~ 52 (283)
T 3dao_A 22 KLIATDIDGTLVKDGSLLIDPEYMSVIDRLI 52 (283)
T ss_dssp CEEEECCBTTTBSTTCSCCCHHHHHHHHHHH
T ss_pred eEEEEeCcCCCCCCCCCcCCHHHHHHHHHHH
Confidence 3699999999996542111255566666654
No 181
>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A
Probab=71.99 E-value=1.8 Score=43.24 Aligned_cols=28 Identities=21% Similarity=0.245 Sum_probs=20.9
Q ss_pred eEEEeCcchhhhhccccchHHHHHHHHhhh
Q 002970 49 GIVFDLDETLIVANTMRSFEDRIEALLRKI 78 (862)
Q Consensus 49 ~lV~DLDeTLi~a~t~~~~e~ri~~l~~~~ 78 (862)
.|+|||||||+... +.++..+++|++..
T Consensus 7 li~~DlDGTLl~~~--~~i~~~~eal~~l~ 34 (264)
T 3epr_A 7 GYLIDLDGTIYKGK--SRIPAGERFIERLQ 34 (264)
T ss_dssp EEEECCBTTTEETT--EECHHHHHHHHHHH
T ss_pred EEEEeCCCceEeCC--EECcCHHHHHHHHH
Confidence 68999999999655 45666777776554
No 182
>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10
Probab=71.74 E-value=2.1 Score=42.15 Aligned_cols=28 Identities=36% Similarity=0.506 Sum_probs=18.8
Q ss_pred eEEEeCcchhhhhccccch-HHHHHHHHhhh
Q 002970 49 GIVFDLDETLIVANTMRSF-EDRIEALLRKI 78 (862)
Q Consensus 49 ~lV~DLDeTLi~a~t~~~~-e~ri~~l~~~~ 78 (862)
.++|||||||+... +.+ +..+++|+++.
T Consensus 5 li~~DlDGTLl~~~--~~i~~~~~~al~~l~ 33 (231)
T 1wr8_A 5 AISIDIDGTITYPN--RMIHEKALEAIRRAE 33 (231)
T ss_dssp EEEEESTTTTBCTT--SCBCHHHHHHHHHHH
T ss_pred EEEEECCCCCCCCC--CcCCHHHHHHHHHHH
Confidence 48999999999753 333 44556665553
No 183
>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}
Probab=71.66 E-value=2.9 Score=40.79 Aligned_cols=36 Identities=8% Similarity=0.025 Sum_probs=28.2
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHH
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMW 203 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~ 203 (862)
+++.||+.+++.+|+ .+-|.+.|.|+..+..+..+.
T Consensus 35 ~~~~pg~~e~L~~L~---~~g~~~~i~T~~~~~~~~~~~ 70 (196)
T 2oda_A 35 AQLTPGAQNALKALR---DQGMPCAWIDELPEALSTPLA 70 (196)
T ss_dssp GSBCTTHHHHHHHHH---HHTCCEEEECCSCHHHHHHHH
T ss_pred CCcCcCHHHHHHHHH---HCCCEEEEEcCChHHHHHHhc
Confidence 345699999888886 456889999999998885444
No 184
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=70.94 E-value=2.1 Score=42.53 Aligned_cols=28 Identities=25% Similarity=0.303 Sum_probs=20.5
Q ss_pred eEEEeCcchhhhhccccchHHHHHHHHhhh
Q 002970 49 GIVFDLDETLIVANTMRSFEDRIEALLRKI 78 (862)
Q Consensus 49 ~lV~DLDeTLi~a~t~~~~e~ri~~l~~~~ 78 (862)
.|+|||||||+...+. ++..+++|++..
T Consensus 8 li~~DlDGTLl~~~~~--~~~~~~ai~~l~ 35 (266)
T 3pdw_A 8 GYLIDLDGTMYNGTEK--IEEACEFVRTLK 35 (266)
T ss_dssp EEEEECSSSTTCHHHH--HHHHHHHHHHHH
T ss_pred EEEEeCcCceEeCCEe--CccHHHHHHHHH
Confidence 5899999999976443 456677776554
No 185
>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A
Probab=70.46 E-value=2.1 Score=42.65 Aligned_cols=29 Identities=38% Similarity=0.461 Sum_probs=18.5
Q ss_pred eEEEeCcchhhhhccccchHHHHHHHHhh
Q 002970 49 GIVFDLDETLIVANTMRSFEDRIEALLRK 77 (862)
Q Consensus 49 ~lV~DLDeTLi~a~t~~~~e~ri~~l~~~ 77 (862)
.|+|||||||+......--+..+++++++
T Consensus 4 li~~DlDGTLl~~~~~~i~~~~~~al~~l 32 (261)
T 2rbk_A 4 ALFFDIDGTLVSFETHRIPSSTIEALEAA 32 (261)
T ss_dssp EEEECSBTTTBCTTTSSCCHHHHHHHHHH
T ss_pred EEEEeCCCCCcCCCCCcCCHHHHHHHHHH
Confidence 58999999999765321124455555544
No 186
>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0
Probab=69.47 E-value=2.3 Score=42.18 Aligned_cols=28 Identities=18% Similarity=0.328 Sum_probs=20.6
Q ss_pred eEEEeCcchhhhhccccchHHHHHHHHhhh
Q 002970 49 GIVFDLDETLIVANTMRSFEDRIEALLRKI 78 (862)
Q Consensus 49 ~lV~DLDeTLi~a~t~~~~e~ri~~l~~~~ 78 (862)
.|+|||||||+...+ .++..+++|++..
T Consensus 10 li~~DlDGTLl~~~~--~~~~~~~ai~~l~ 37 (268)
T 3qgm_A 10 GYIIDIDGVIGKSVT--PIPEGVEGVKKLK 37 (268)
T ss_dssp EEEEECBTTTEETTE--ECHHHHHHHHHHH
T ss_pred EEEEcCcCcEECCCE--eCcCHHHHHHHHH
Confidence 589999999997665 3556777776543
No 187
>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0
Probab=69.12 E-value=2.4 Score=41.82 Aligned_cols=28 Identities=21% Similarity=0.027 Sum_probs=17.1
Q ss_pred eEEEeCcchhhhhccccchHHHHHHHHhh
Q 002970 49 GIVFDLDETLIVANTMRSFEDRIEALLRK 77 (862)
Q Consensus 49 ~lV~DLDeTLi~a~t~~~~e~ri~~l~~~ 77 (862)
.|+|||||||+.....= -+..+++|+++
T Consensus 7 li~fDlDGTLl~~~~~i-~~~~~~al~~l 34 (274)
T 3fzq_A 7 LLILDIDGTLRDEVYGI-PESAKHAIRLC 34 (274)
T ss_dssp EEEECSBTTTBBTTTBC-CHHHHHHHHHH
T ss_pred EEEEECCCCCCCCCCcC-CHHHHHHHHHH
Confidence 58999999999654211 13334445444
No 188
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=69.02 E-value=2.2 Score=41.33 Aligned_cols=14 Identities=50% Similarity=0.764 Sum_probs=12.0
Q ss_pred eEEEeCcchhhhhc
Q 002970 49 GIVFDLDETLIVAN 62 (862)
Q Consensus 49 ~lV~DLDeTLi~a~ 62 (862)
+|+|||||||+...
T Consensus 4 ~iiFDlDGTL~d~~ 17 (241)
T 2hoq_A 4 VIFFDLDDTLVDTS 17 (241)
T ss_dssp EEEECSBTTTBCHH
T ss_pred EEEEcCCCCCCCCh
Confidence 68999999999654
No 189
>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A
Probab=68.92 E-value=1.6 Score=43.63 Aligned_cols=27 Identities=22% Similarity=0.188 Sum_probs=17.7
Q ss_pred eEEEeCcchhhhhccccchHHHHHHHHhhh
Q 002970 49 GIVFDLDETLIVANTMRSFEDRIEALLRKI 78 (862)
Q Consensus 49 ~lV~DLDeTLi~a~t~~~~e~ri~~l~~~~ 78 (862)
.|+|||||||+ .. ..++..+++|+++.
T Consensus 4 li~~DlDGTLl-~~--~~~~~~~~~l~~l~ 30 (249)
T 2zos_A 4 LIFLDIDKTLI-PG--YEPDPAKPIIEELK 30 (249)
T ss_dssp EEEECCSTTTC-TT--SCSGGGHHHHHHHH
T ss_pred EEEEeCCCCcc-CC--CCcHHHHHHHHHHH
Confidence 58999999999 32 23344556665543
No 190
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=68.83 E-value=1.6 Score=44.62 Aligned_cols=79 Identities=14% Similarity=0.136 Sum_probs=50.0
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCC--------CCCccccccccCeEEeccCCCc------
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDP--------ESNLINTKELLDRIVCVKSGSR------ 230 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP--------~g~lFg~~~l~~RIisres~~~------ 230 (862)
+++.||+.+++..|+ .+-+.|.|+|+..+.++..+.+.|+- .|-.| +-+++.+++..
T Consensus 187 ~~~~~g~~e~L~~L~---~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~~------~~~~~~~~~~~kp~p~~ 257 (301)
T 1ltq_A 187 DVINPMVVELSKMYA---LMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPL------VMQCQREQGDTRKDDVV 257 (301)
T ss_dssp CCBCHHHHHHHHHHH---HTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCC------SEEEECCTTCCSCHHHH
T ss_pred cCCChHHHHHHHHHH---HCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCCc------hheeeccCCCCcHHHHH
Confidence 566799999888886 56689999999998887554444433 33333 46777654421
Q ss_pred --cchhhhccCCCCCCcEEEEEcCCcc
Q 002970 231 --KSLFNVFQDGTCHPKMALVIDDRLK 255 (862)
Q Consensus 231 --KsL~~lfp~~~~~~~~vVIIDDR~d 255 (862)
+-+..+.. ...+.+++|+|+..
T Consensus 258 ~~~~~~~~~~---~~~~~~~~vgD~~~ 281 (301)
T 1ltq_A 258 KEEIFWKHIA---PHFDVKLAIDDRTQ 281 (301)
T ss_dssp HHHHHHHHTT---TTCEEEEEEECCHH
T ss_pred HHHHHHHHhc---cccceEEEeCCcHH
Confidence 12333321 12355678999864
No 191
>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6
Probab=68.52 E-value=2.5 Score=39.42 Aligned_cols=14 Identities=36% Similarity=0.643 Sum_probs=11.7
Q ss_pred eEEEeCcchhhhhc
Q 002970 49 GIVFDLDETLIVAN 62 (862)
Q Consensus 49 ~lV~DLDeTLi~a~ 62 (862)
+|+|||||||+...
T Consensus 11 ~i~fDlDGTL~~~~ 24 (226)
T 1te2_A 11 AAIFDMDGLLIDSE 24 (226)
T ss_dssp EEEECCBTTTBCCH
T ss_pred EEEECCCCCcCcCH
Confidence 68999999999543
No 192
>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}
Probab=68.33 E-value=2.3 Score=40.05 Aligned_cols=14 Identities=36% Similarity=0.404 Sum_probs=11.9
Q ss_pred eEEEeCcchhhhhc
Q 002970 49 GIVFDLDETLIVAN 62 (862)
Q Consensus 49 ~lV~DLDeTLi~a~ 62 (862)
+|+|||||||+...
T Consensus 6 ~i~fDlDGTL~d~~ 19 (235)
T 2om6_A 6 LVTFDVWNTLLDLN 19 (235)
T ss_dssp EEEECCBTTTBCHH
T ss_pred EEEEeCCCCCCCcc
Confidence 58999999999643
No 193
>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A
Probab=68.33 E-value=2.6 Score=41.73 Aligned_cols=29 Identities=31% Similarity=0.289 Sum_probs=19.1
Q ss_pred eEEEeCcchhhhhccccchHHHHHHHHhhh
Q 002970 49 GIVFDLDETLIVANTMRSFEDRIEALLRKI 78 (862)
Q Consensus 49 ~lV~DLDeTLi~a~t~~~~e~ri~~l~~~~ 78 (862)
.|+|||||||+..... --+..+++++++.
T Consensus 5 li~~DlDGTLl~~~~~-i~~~~~~al~~l~ 33 (258)
T 2pq0_A 5 IVFFDIDGTLLDEQKQ-LPLSTIEAVRRLK 33 (258)
T ss_dssp EEEECTBTTTBCTTSC-CCHHHHHHHHHHH
T ss_pred EEEEeCCCCCcCCCCc-cCHHHHHHHHHHH
Confidence 5899999999976422 1244556666553
No 194
>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A
Probab=68.18 E-value=2.4 Score=42.33 Aligned_cols=29 Identities=34% Similarity=0.296 Sum_probs=18.5
Q ss_pred eEEEeCcchhhhhccccchHHHHHHHHhhh
Q 002970 49 GIVFDLDETLIVANTMRSFEDRIEALLRKI 78 (862)
Q Consensus 49 ~lV~DLDeTLi~a~t~~~~e~ri~~l~~~~ 78 (862)
.|+|||||||+.....- -+.-+++|+++.
T Consensus 7 li~fDlDGTLl~~~~~i-~~~~~~al~~l~ 35 (279)
T 4dw8_A 7 LIVLDLDGTLTNSKKEI-SSRNRETLIRIQ 35 (279)
T ss_dssp EEEECCCCCCSCTTSCC-CHHHHHHHHHHH
T ss_pred EEEEeCCCCCCCCCCcc-CHHHHHHHHHHH
Confidence 58999999999654321 244455555543
No 195
>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}
Probab=68.04 E-value=2.5 Score=43.29 Aligned_cols=14 Identities=29% Similarity=0.406 Sum_probs=12.0
Q ss_pred eEEEeCcchhhhhc
Q 002970 49 GIVFDLDETLIVAN 62 (862)
Q Consensus 49 ~lV~DLDeTLi~a~ 62 (862)
.|+|||||||+...
T Consensus 39 li~fDlDGTLld~~ 52 (304)
T 3l7y_A 39 VIATDMDGTFLNSK 52 (304)
T ss_dssp EEEECCCCCCSCTT
T ss_pred EEEEeCCCCCCCCC
Confidence 58999999999654
No 196
>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A
Probab=67.95 E-value=1.6 Score=40.80 Aligned_cols=77 Identities=9% Similarity=0.117 Sum_probs=47.8
Q ss_pred eeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-Cc----cchhhhccCC
Q 002970 166 RLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-SR----KSLFNVFQDG 240 (862)
Q Consensus 166 KLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres~-~~----KsL~~lfp~~ 240 (862)
++.|++.+++..|+ ..-+.+.|+|++ ..+..+++.++ ...+++.+++.+.. .. ..+..+....
T Consensus 91 ~~~~~~~~~l~~l~---~~g~~~~i~t~~--~~~~~~l~~~~-------l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~l 158 (221)
T 2wf7_A 91 DVYPGILQLLKDLR---SNKIKIALASAS--KNGPFLLERMN-------LTGYFDAIADPAEVAASKPAPDIFIAAAHAV 158 (221)
T ss_dssp GBCTTHHHHHHHHH---HTTCEEEECCCC--TTHHHHHHHTT-------CGGGCSEECCTTTSSSCTTSSHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHH---HCCCeEEEEcCc--HHHHHHHHHcC-------hHHHcceEeccccCCCCCCChHHHHHHHHHc
Confidence 45689999777775 345899999998 55666666642 23445667665332 11 1333333322
Q ss_pred CCCCcEEEEEcCCc
Q 002970 241 TCHPKMALVIDDRL 254 (862)
Q Consensus 241 ~~~~~~vVIIDDR~ 254 (862)
...++-++.|+|+.
T Consensus 159 gi~~~~~i~iGD~~ 172 (221)
T 2wf7_A 159 GVAPSESIGLEDSQ 172 (221)
T ss_dssp TCCGGGEEEEESSH
T ss_pred CCChhHeEEEeCCH
Confidence 25677888889874
No 197
>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*
Probab=67.80 E-value=2.3 Score=42.46 Aligned_cols=27 Identities=30% Similarity=0.300 Sum_probs=18.0
Q ss_pred eeEEEeCcchhhhhccccchHHHHHHHHh
Q 002970 48 LGIVFDLDETLIVANTMRSFEDRIEALLR 76 (862)
Q Consensus 48 L~lV~DLDeTLi~a~t~~~~e~ri~~l~~ 76 (862)
..|++||||||+... +.++..+++|++
T Consensus 4 ~li~~DlDGTLl~~~--~~~~~~~~~l~~ 30 (244)
T 1s2o_A 4 LLLISDLDNTWVGDQ--QALEHLQEYLGD 30 (244)
T ss_dssp EEEEECTBTTTBSCH--HHHHHHHHHHHT
T ss_pred eEEEEeCCCCCcCCH--HHHHHHHHHHHH
Confidence 379999999999754 334444444443
No 198
>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A
Probab=67.62 E-value=3.4 Score=40.99 Aligned_cols=31 Identities=19% Similarity=0.198 Sum_probs=21.4
Q ss_pred ceeEEEeCcchhhhhccccch-HHHHHHHHhhhc
Q 002970 47 CLGIVFDLDETLIVANTMRSF-EDRIEALLRKIS 79 (862)
Q Consensus 47 ~L~lV~DLDeTLi~a~t~~~~-e~ri~~l~~~~~ 79 (862)
+-.|+|||||||+... +.+ +..+++|++...
T Consensus 6 ~kli~~DlDGTLl~~~--~~i~~~~~~al~~l~~ 37 (246)
T 2amy_A 6 PALCLFDVDGTLTAPR--QKITKEMDDFLQKLRQ 37 (246)
T ss_dssp SEEEEEESBTTTBCTT--SCCCHHHHHHHHHHTT
T ss_pred ceEEEEECCCCcCCCC--cccCHHHHHHHHHHHh
Confidence 3468999999999754 223 566777766543
No 199
>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0
Probab=67.62 E-value=2.4 Score=42.31 Aligned_cols=28 Identities=25% Similarity=0.283 Sum_probs=10.1
Q ss_pred eEEEeCcchhhhhccccchHHHHHHHHhh
Q 002970 49 GIVFDLDETLIVANTMRSFEDRIEALLRK 77 (862)
Q Consensus 49 ~lV~DLDeTLi~a~t~~~~e~ri~~l~~~ 77 (862)
.|+|||||||+..... -.+..+++|+++
T Consensus 7 li~~DlDGTLl~~~~~-i~~~~~~al~~l 34 (279)
T 3mpo_A 7 LIAIDIDGTLLNEKNE-LAQATIDAVQAA 34 (279)
T ss_dssp EEEECC------------CHHHHHHHHHH
T ss_pred EEEEcCcCCCCCCCCc-CCHHHHHHHHHH
Confidence 5899999999965421 123344455444
No 200
>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=67.26 E-value=2.7 Score=39.22 Aligned_cols=13 Identities=38% Similarity=0.447 Sum_probs=11.4
Q ss_pred eEEEeCcchhhhh
Q 002970 49 GIVFDLDETLIVA 61 (862)
Q Consensus 49 ~lV~DLDeTLi~a 61 (862)
+|+|||||||+..
T Consensus 8 ~v~fDlDGTL~d~ 20 (225)
T 3d6j_A 8 VYLFDFDYTLADS 20 (225)
T ss_dssp EEEECCBTTTEEC
T ss_pred EEEEeCCCCCCCC
Confidence 6899999999954
No 201
>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0
Probab=67.10 E-value=2.5 Score=42.36 Aligned_cols=29 Identities=14% Similarity=0.162 Sum_probs=18.5
Q ss_pred eEEEeCcchhhhhccccchHHHHHHHHhhh
Q 002970 49 GIVFDLDETLIVANTMRSFEDRIEALLRKI 78 (862)
Q Consensus 49 ~lV~DLDeTLi~a~t~~~~e~ri~~l~~~~ 78 (862)
.|+|||||||+..... --+..+++|+++.
T Consensus 8 li~fDlDGTLl~~~~~-i~~~~~~al~~l~ 36 (290)
T 3dnp_A 8 LLALNIDGALLRSNGK-IHQATKDAIEYVK 36 (290)
T ss_dssp EEEECCCCCCSCTTSC-CCHHHHHHHHHHH
T ss_pred EEEEcCCCCCCCCCCc-cCHHHHHHHHHHH
Confidence 5899999999965422 1244455565553
No 202
>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A
Probab=66.90 E-value=4.5 Score=37.80 Aligned_cols=14 Identities=29% Similarity=0.586 Sum_probs=12.1
Q ss_pred eEEEeCcchhhhhc
Q 002970 49 GIVFDLDETLIVAN 62 (862)
Q Consensus 49 ~lV~DLDeTLi~a~ 62 (862)
+|+|||||||+...
T Consensus 4 ~i~fDlDGTL~d~~ 17 (221)
T 2wf7_A 4 AVLFDLDGVITDTA 17 (221)
T ss_dssp EEEECCBTTTBTHH
T ss_pred EEEECCCCcccCCh
Confidence 58999999999654
No 203
>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10
Probab=66.85 E-value=2.6 Score=42.84 Aligned_cols=30 Identities=20% Similarity=0.201 Sum_probs=19.8
Q ss_pred eEEEeCcchhhhhccccchHHHHHHHHhhhc
Q 002970 49 GIVFDLDETLIVANTMRSFEDRIEALLRKIS 79 (862)
Q Consensus 49 ~lV~DLDeTLi~a~t~~~~e~ri~~l~~~~~ 79 (862)
.|+|||||||+..... --+..+++|+++..
T Consensus 7 li~~DlDGTLl~~~~~-i~~~~~~aL~~l~~ 36 (282)
T 1rkq_A 7 LIAIDMDGTLLLPDHT-ISPAVKNAIAAARA 36 (282)
T ss_dssp EEEECCCCCCSCTTSC-CCHHHHHHHHHHHH
T ss_pred EEEEeCCCCCCCCCCc-CCHHHHHHHHHHHH
Confidence 5899999999965421 12455666766543
No 204
>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A
Probab=66.63 E-value=3.6 Score=40.26 Aligned_cols=80 Identities=9% Similarity=-0.013 Sum_probs=49.6
Q ss_pred eeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-----CccchhhhccCC
Q 002970 166 RLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-----SRKSLFNVFQDG 240 (862)
Q Consensus 166 KLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres~-----~~KsL~~lfp~~ 240 (862)
++.|++.+++.+|+ ..-|.+.|+|++.+.++..+++.++-.+ +|. +.+++.+.. ....+..++...
T Consensus 103 ~~~~~~~~~l~~l~---~~g~~~~i~t~~~~~~~~~~l~~~~~~~-~~~-----~~~~~~~~~~~~kp~~~~~~~~~~~l 173 (267)
T 1swv_A 103 SPINGVKEVIASLR---ERGIKIGSTTGYTREMMDIVAKEAALQG-YKP-----DFLVTPDDVPAGRPYPWMCYKNAMEL 173 (267)
T ss_dssp CBCTTHHHHHHHHH---HTTCEEEEBCSSCHHHHHHHHHHHHHTT-CCC-----SCCBCGGGSSCCTTSSHHHHHHHHHH
T ss_pred ccCccHHHHHHHHH---HcCCeEEEEcCCCHHHHHHHHHHcCCcc-cCh-----HheecCCccCCCCCCHHHHHHHHHHh
Confidence 45699999777776 3568999999999999998888763222 221 445554321 112233332211
Q ss_pred CCCC-cEEEEEcCCc
Q 002970 241 TCHP-KMALVIDDRL 254 (862)
Q Consensus 241 ~~~~-~~vVIIDDR~ 254 (862)
+..+ +-+++|+|+.
T Consensus 174 gi~~~~~~i~iGD~~ 188 (267)
T 1swv_A 174 GVYPMNHMIKVGDTV 188 (267)
T ss_dssp TCCSGGGEEEEESSH
T ss_pred CCCCCcCEEEEeCCH
Confidence 1456 6788888875
No 205
>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}
Probab=66.38 E-value=2.7 Score=40.79 Aligned_cols=13 Identities=23% Similarity=0.570 Sum_probs=11.6
Q ss_pred eEEEeCcchhhhh
Q 002970 49 GIVFDLDETLIVA 61 (862)
Q Consensus 49 ~lV~DLDeTLi~a 61 (862)
+|+|||||||+..
T Consensus 14 ~i~fDlDGTLl~s 26 (271)
T 2x4d_A 14 GVLLDISGVLYDS 26 (271)
T ss_dssp EEEECCBTTTEEC
T ss_pred EEEEeCCCeEEec
Confidence 5899999999974
No 206
>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A
Probab=65.52 E-value=3.2 Score=40.61 Aligned_cols=15 Identities=13% Similarity=0.240 Sum_probs=12.7
Q ss_pred eEEEeCcchhhhhcc
Q 002970 49 GIVFDLDETLIVANT 63 (862)
Q Consensus 49 ~lV~DLDeTLi~a~t 63 (862)
+|+|||||||+....
T Consensus 8 ~i~fDlDGTLld~~~ 22 (267)
T 1swv_A 8 AVIFAWAGTTVDYGC 22 (267)
T ss_dssp EEEECSBTTTBSTTC
T ss_pred EEEEecCCCEEeCCC
Confidence 689999999997654
No 207
>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14
Probab=65.23 E-value=3.1 Score=41.18 Aligned_cols=27 Identities=22% Similarity=0.330 Sum_probs=18.3
Q ss_pred eEEEeCcchhhhhccccchHHHHHHHHhh
Q 002970 49 GIVFDLDETLIVANTMRSFEDRIEALLRK 77 (862)
Q Consensus 49 ~lV~DLDeTLi~a~t~~~~e~ri~~l~~~ 77 (862)
+++|||||||+... ..++.-+++++.+
T Consensus 7 ~v~fDlDGTL~~~~--~~~~~~~~~l~~l 33 (264)
T 1yv9_A 7 GYLIDLDGTIYLGK--EPIPAGKRFVERL 33 (264)
T ss_dssp EEEECCBTTTEETT--EECHHHHHHHHHH
T ss_pred EEEEeCCCeEEeCC--EECcCHHHHHHHH
Confidence 69999999999643 3455444555444
No 208
>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6
Probab=64.87 E-value=1.9 Score=40.84 Aligned_cols=14 Identities=36% Similarity=0.655 Sum_probs=12.0
Q ss_pred eEEEeCcchhhhhc
Q 002970 49 GIVFDLDETLIVAN 62 (862)
Q Consensus 49 ~lV~DLDeTLi~a~ 62 (862)
+|+|||||||+...
T Consensus 6 ~iifDlDGTL~d~~ 19 (234)
T 2hcf_A 6 LVLFDIDGTLLKVE 19 (234)
T ss_dssp EEEECCBTTTEEEC
T ss_pred EEEEcCCCCcccCc
Confidence 68999999999654
No 209
>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}
Probab=64.18 E-value=3.5 Score=41.74 Aligned_cols=30 Identities=23% Similarity=0.125 Sum_probs=18.3
Q ss_pred eeEEEeCcchhhhhccccchHHHHHHHHhhh
Q 002970 48 LGIVFDLDETLIVANTMRSFEDRIEALLRKI 78 (862)
Q Consensus 48 L~lV~DLDeTLi~a~t~~~~e~ri~~l~~~~ 78 (862)
=.|+|||||||+..... --+..+++|+++.
T Consensus 22 kli~~DlDGTLl~~~~~-i~~~~~~al~~l~ 51 (285)
T 3pgv_A 22 QVVASDLDGTLLSPDHF-LTPYAKETLKLLT 51 (285)
T ss_dssp CEEEEECCCCCSCTTSC-CCHHHHHHHHHHH
T ss_pred eEEEEeCcCCCCCCCCc-CCHHHHHHHHHHH
Confidence 35899999999965321 1233445555553
No 210
>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*
Probab=64.00 E-value=4 Score=41.12 Aligned_cols=29 Identities=24% Similarity=0.244 Sum_probs=20.5
Q ss_pred eeEEEeCcchhhhhccccch-HHHHHHHHhhh
Q 002970 48 LGIVFDLDETLIVANTMRSF-EDRIEALLRKI 78 (862)
Q Consensus 48 L~lV~DLDeTLi~a~t~~~~-e~ri~~l~~~~ 78 (862)
-.|++||||||+.... .+ +..+++|+++.
T Consensus 14 kli~~DlDGTLl~~~~--~is~~~~~al~~l~ 43 (262)
T 2fue_A 14 VLCLFDVDGTLTPARQ--KIDPEVAAFLQKLR 43 (262)
T ss_dssp EEEEEESBTTTBSTTS--CCCHHHHHHHHHHT
T ss_pred EEEEEeCccCCCCCCC--cCCHHHHHHHHHHH
Confidence 4589999999997642 23 56677777654
No 211
>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19
Probab=63.69 E-value=4.6 Score=39.29 Aligned_cols=38 Identities=26% Similarity=0.182 Sum_probs=29.9
Q ss_pred eeCcChHHHHHHHhhhccccEEEEEEeCCcH---------------HHHHHHHHhh
Q 002970 166 RLRPAWEDLRSYLTARGRKRFEVYVCTMAER---------------DYALEMWRLL 206 (862)
Q Consensus 166 KLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R---------------~YA~~I~rlL 206 (862)
++.|++.+++..|+ .+-|.+.|+|++.+ .++..+++.+
T Consensus 56 ~~~~g~~e~L~~L~---~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 108 (218)
T 2o2x_A 56 VLRPQMLPAIATAN---RAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREE 108 (218)
T ss_dssp CBCGGGHHHHHHHH---HHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHT
T ss_pred eECcCHHHHHHHHH---HCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHc
Confidence 45689999777775 45699999999998 6777777764
No 212
>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6
Probab=63.52 E-value=7.6 Score=36.53 Aligned_cols=77 Identities=16% Similarity=0.189 Sum_probs=48.3
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCcccccccc-CeEEeccC-CCc------cchhhh
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELL-DRIVCVKS-GSR------KSLFNV 236 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~-~RIisres-~~~------KsL~~l 236 (862)
+++.|++.+ +|+ .... .++|+|++.+.++..+++.++- ..++ +.+++.+. +.. ..+..+
T Consensus 86 ~~~~~~~~~---~l~-~l~~--~~~i~s~~~~~~~~~~l~~~~l-------~~~~~~~~~~~~~~~~~~~kpk~~~~~~~ 152 (229)
T 2fdr_A 86 VKIIDGVKF---ALS-RLTT--PRCICSNSSSHRLDMMLTKVGL-------KPYFAPHIYSAKDLGADRVKPKPDIFLHG 152 (229)
T ss_dssp CCBCTTHHH---HHH-HCCS--CEEEEESSCHHHHHHHHHHTTC-------GGGTTTCEEEHHHHCTTCCTTSSHHHHHH
T ss_pred CccCcCHHH---HHH-HhCC--CEEEEECCChhHHHHHHHhCCh-------HHhccceEEeccccccCCCCcCHHHHHHH
Confidence 355688888 554 3333 8999999999999999888632 2334 67777532 111 123333
Q ss_pred ccCCCCCCcEEEEEcCCc
Q 002970 237 FQDGTCHPKMALVIDDRL 254 (862)
Q Consensus 237 fp~~~~~~~~vVIIDDR~ 254 (862)
...-...++-++.|+|+.
T Consensus 153 ~~~l~~~~~~~i~iGD~~ 170 (229)
T 2fdr_A 153 AAQFGVSPDRVVVVEDSV 170 (229)
T ss_dssp HHHHTCCGGGEEEEESSH
T ss_pred HHHcCCChhHeEEEcCCH
Confidence 322125667788999985
No 213
>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10
Probab=63.06 E-value=3.7 Score=41.31 Aligned_cols=26 Identities=35% Similarity=0.443 Sum_probs=18.2
Q ss_pred eEEEeCcchhhhhccccch-HHHHHHHHh
Q 002970 49 GIVFDLDETLIVANTMRSF-EDRIEALLR 76 (862)
Q Consensus 49 ~lV~DLDeTLi~a~t~~~~-e~ri~~l~~ 76 (862)
.|+|||||||+... +.+ +..+++|++
T Consensus 4 li~~DlDGTLl~~~--~~i~~~~~~al~~ 30 (268)
T 1nf2_A 4 VFVFDLDGTLLNDN--LEISEKDRRNIEK 30 (268)
T ss_dssp EEEEECCCCCSCTT--SCCCHHHHHHHHH
T ss_pred EEEEeCCCcCCCCC--CccCHHHHHHHHH
Confidence 48999999999653 223 445667766
No 214
>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}
Probab=62.58 E-value=2.3 Score=39.66 Aligned_cols=14 Identities=14% Similarity=0.494 Sum_probs=12.2
Q ss_pred eEEEeCcchhhhhc
Q 002970 49 GIVFDLDETLIVAN 62 (862)
Q Consensus 49 ~lV~DLDeTLi~a~ 62 (862)
+|+|||||||+...
T Consensus 6 ~viFDlDGTL~d~~ 19 (200)
T 3cnh_A 6 ALFWDIGGVLLTNG 19 (200)
T ss_dssp EEEECCBTTTBCCS
T ss_pred EEEEeCCCeeECCC
Confidence 68999999999754
No 215
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=66.51 E-value=1.6 Score=44.46 Aligned_cols=75 Identities=15% Similarity=0.162 Sum_probs=49.0
Q ss_pred EEeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCCCccchhhhccCCCCC
Q 002970 164 LVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSGSRKSLFNVFQDGTCH 243 (862)
Q Consensus 164 ~vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres~~~KsL~~lfp~~~~~ 243 (862)
..+++|++.+++..|+ ..-|.++|.|++.+..+..+++.+.= ..+|..++. ....+-++++- ..
T Consensus 134 ~~~~~~g~~~~l~~L~---~~g~~~~i~T~~~~~~~~~~~~~~gl-------~~~f~~~~p--~~k~~~~~~l~----~~ 197 (263)
T 2yj3_A 134 SDVPRPNLKDYLEKLK---NEGLKIIILSGDKEDKVKELSKELNI-------QEYYSNLSP--EDKVRIIEKLK----QN 197 (263)
Confidence 3578999999777775 44589999999999999999988542 233334431 11222233322 33
Q ss_pred CcEEEEEcCCc
Q 002970 244 PKMALVIDDRL 254 (862)
Q Consensus 244 ~~~vVIIDDR~ 254 (862)
++-+++|+|+.
T Consensus 198 ~~~~~~VGD~~ 208 (263)
T 2yj3_A 198 GNKVLMIGDGV 208 (263)
Confidence 45688888873
No 216
>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A
Probab=62.39 E-value=2.6 Score=40.99 Aligned_cols=29 Identities=10% Similarity=0.049 Sum_probs=18.6
Q ss_pred CcChHHHHHHHhhhccccEEEEEEeCCcHHHHHH
Q 002970 168 RPAWEDLRSYLTARGRKRFEVYVCTMAERDYALE 201 (862)
Q Consensus 168 RPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~ 201 (862)
-|++.+++..|+ +.+.+ |+|+..+.++..
T Consensus 124 ~~~~~~~l~~l~----~~~~~-i~t~~~~~~~~~ 152 (259)
T 2ho4_A 124 YQLLNQAFRLLL----DGAPL-IAIHKARYYKRK 152 (259)
T ss_dssp HHHHHHHHHHHH----TTCCE-EESCCCSEEEET
T ss_pred HHHHHHHHHHHH----CCCEE-EEECCCCcCccc
Confidence 367777555553 44567 899987765543
No 217
>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6
Probab=62.15 E-value=2.4 Score=40.01 Aligned_cols=14 Identities=36% Similarity=0.548 Sum_probs=11.8
Q ss_pred eEEEeCcchhhhhc
Q 002970 49 GIVFDLDETLIVAN 62 (862)
Q Consensus 49 ~lV~DLDeTLi~a~ 62 (862)
+|+|||||||+...
T Consensus 6 ~i~fDlDGTL~d~~ 19 (229)
T 2fdr_A 6 LIIFDCDGVLVDSE 19 (229)
T ss_dssp EEEECSBTTTBCCH
T ss_pred EEEEcCCCCcCccH
Confidence 58999999999554
No 218
>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A
Probab=61.87 E-value=3.9 Score=41.12 Aligned_cols=28 Identities=18% Similarity=0.298 Sum_probs=17.8
Q ss_pred eEEEeCcchhhhhccccchHHH--HHHHHhhh
Q 002970 49 GIVFDLDETLIVANTMRSFEDR--IEALLRKI 78 (862)
Q Consensus 49 ~lV~DLDeTLi~a~t~~~~e~r--i~~l~~~~ 78 (862)
.|+|||||||+... +.+-.+ +++|+++.
T Consensus 5 li~~DlDGTLl~~~--~~i~~~~~~~al~~l~ 34 (271)
T 1rlm_A 5 VIVTDMDGTFLNDA--KTYNQPRFMAQYQELK 34 (271)
T ss_dssp EEEECCCCCCSCTT--SCCCHHHHHHHHHHHH
T ss_pred EEEEeCCCCCCCCC--CcCCHHHHHHHHHHHH
Confidence 58999999999754 223322 45555543
No 219
>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=60.89 E-value=2.5 Score=40.39 Aligned_cols=14 Identities=50% Similarity=0.783 Sum_probs=12.0
Q ss_pred eEEEeCcchhhhhc
Q 002970 49 GIVFDLDETLIVAN 62 (862)
Q Consensus 49 ~lV~DLDeTLi~a~ 62 (862)
+|+|||||||+...
T Consensus 6 ~viFDlDGTL~d~~ 19 (210)
T 2ah5_A 6 AIFFDLDGTLVDSS 19 (210)
T ss_dssp EEEECSBTTTEECH
T ss_pred EEEEcCCCcCccCH
Confidence 68999999999643
No 220
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=60.79 E-value=7.9 Score=47.37 Aligned_cols=36 Identities=19% Similarity=0.195 Sum_probs=31.0
Q ss_pred cEEEEEEE-CCEEEeeeecCCHHHHHHHHHHHHHHHhh
Q 002970 776 EVYAQVEI-DGQVLGKGIGSTWDEAKMQAAEKALGSLR 812 (862)
Q Consensus 776 eF~aqV~I-dGkvyG~GtGsSKKeAKqqAAe~AL~aL~ 812 (862)
.|.|++.+ ++.+. .|+-+-||.|+|.||+.||.+|=
T Consensus 58 ~~~c~~~lp~~~~~-~~~~~~kkd~eq~aa~~al~~~g 94 (950)
T 3htx_A 58 LYRCHLQLPEFSVV-SNVFKKKKDSEQSAAELALDKLG 94 (950)
T ss_dssp EEEEEEECSSCEEE-CCCBSCHHHHHHHHHHHHHTTTT
T ss_pred eEEEEeeCCCceEe-cchhhccccHHHHHHHHHHHHhC
Confidence 68888888 55555 79999999999999999999984
No 221
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=60.71 E-value=6.2 Score=43.25 Aligned_cols=41 Identities=15% Similarity=0.128 Sum_probs=37.4
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCC
Q 002970 165 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDP 208 (862)
Q Consensus 165 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP 208 (862)
+|++|+..||...|+ +.-|++||+|.|-+..+..|++.|-.
T Consensus 220 ir~~p~~~eLi~~L~---~~G~~v~IVSgg~~~~v~~ia~~lg~ 260 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLE---ENGIDCYIVSASFIDIVRAFATDTNN 260 (385)
T ss_dssp CEECHHHHHHHHHHH---HTTCEEEEEEEEEHHHHHHHHHCTTS
T ss_pred ceeCHHHHHHHHHHH---HCCCeEEEEcCCcHHHHHHHHHHhCc
Confidence 578999999999998 77899999999999999999998754
No 222
>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*
Probab=60.46 E-value=3 Score=41.28 Aligned_cols=28 Identities=18% Similarity=0.329 Sum_probs=19.0
Q ss_pred ceeEEEeCcchhhhhccccchHHHHHHHHh
Q 002970 47 CLGIVFDLDETLIVANTMRSFEDRIEALLR 76 (862)
Q Consensus 47 ~L~lV~DLDeTLi~a~t~~~~e~ri~~l~~ 76 (862)
.-+++|||||||+..... .+..+++++.
T Consensus 17 ~~~v~~DlDGTLl~~~~~--~~~~~~~l~~ 44 (271)
T 1vjr_A 17 IELFILDMDGTFYLDDSL--LPGSLEFLET 44 (271)
T ss_dssp CCEEEECCBTTTEETTEE--CTTHHHHHHH
T ss_pred CCEEEEcCcCcEEeCCEE--CcCHHHHHHH
Confidence 346999999999977543 3445555543
No 223
>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10
Probab=59.36 E-value=4.5 Score=41.06 Aligned_cols=28 Identities=29% Similarity=0.239 Sum_probs=17.9
Q ss_pred eEEEeCcchhhhhccccchHHHHHHHHhh
Q 002970 49 GIVFDLDETLIVANTMRSFEDRIEALLRK 77 (862)
Q Consensus 49 ~lV~DLDeTLi~a~t~~~~e~ri~~l~~~ 77 (862)
.|+|||||||+.....- -+..++++++.
T Consensus 6 li~~DlDGTLl~~~~~i-~~~~~~al~~l 33 (288)
T 1nrw_A 6 LIAIDLDGTLLNSKHQV-SLENENALRQA 33 (288)
T ss_dssp EEEEECCCCCSCTTSCC-CHHHHHHHHHH
T ss_pred EEEEeCCCCCCCCCCcc-CHHHHHHHHHH
Confidence 58999999999764321 24444555443
No 224
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=59.12 E-value=3.5 Score=39.59 Aligned_cols=30 Identities=20% Similarity=0.216 Sum_probs=18.7
Q ss_pred eEEEeCcchhhhhcc--c-cchHHHHHHHHhhh
Q 002970 49 GIVFDLDETLIVANT--M-RSFEDRIEALLRKI 78 (862)
Q Consensus 49 ~lV~DLDeTLi~a~t--~-~~~e~ri~~l~~~~ 78 (862)
.|+|||||||+.... + ...+.-+++|+.+.
T Consensus 5 ~i~~DlDGTL~~~~~~~i~~~~~~~~~al~~l~ 37 (142)
T 2obb_A 5 TIAVDFDGTIVEHRYPRIGEEIPFAVETLKLLQ 37 (142)
T ss_dssp EEEECCBTTTBCSCTTSCCCBCTTHHHHHHHHH
T ss_pred EEEEECcCCCCCCCCccccccCHHHHHHHHHHH
Confidence 689999999997542 1 11234456665553
No 225
>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A
Probab=58.35 E-value=3 Score=41.79 Aligned_cols=15 Identities=47% Similarity=0.682 Sum_probs=12.6
Q ss_pred eeEEEeCcchhhhhc
Q 002970 48 LGIVFDLDETLIVAN 62 (862)
Q Consensus 48 L~lV~DLDeTLi~a~ 62 (862)
=+|+|||||||+...
T Consensus 19 k~viFDlDGTLvds~ 33 (260)
T 2gfh_A 19 RAVFFDLDNTLIDTA 33 (260)
T ss_dssp CEEEECCBTTTBCHH
T ss_pred eEEEEcCCCCCCCCH
Confidence 379999999999654
No 226
>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*
Probab=57.45 E-value=5.5 Score=40.26 Aligned_cols=29 Identities=21% Similarity=0.298 Sum_probs=18.4
Q ss_pred eEEEeCcchhhhhccccchHHHHHHHHhhh
Q 002970 49 GIVFDLDETLIVANTMRSFEDRIEALLRKI 78 (862)
Q Consensus 49 ~lV~DLDeTLi~a~t~~~~e~ri~~l~~~~ 78 (862)
.|+|||||||+.....=+ +..+++|+++.
T Consensus 6 li~~DlDGTLl~~~~~i~-~~~~~~l~~l~ 34 (246)
T 3f9r_A 6 LLLFDVDGTLTPPRLCQT-DEMRALIKRAR 34 (246)
T ss_dssp EEEECSBTTTBSTTSCCC-HHHHHHHHHHH
T ss_pred EEEEeCcCCcCCCCCccC-HHHHHHHHHHH
Confidence 589999999997642211 44555555443
No 227
>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10
Probab=53.82 E-value=4.2 Score=41.34 Aligned_cols=30 Identities=27% Similarity=0.280 Sum_probs=19.6
Q ss_pred eeEEEeCcchhhhhccccchHHHHHHHHhhh
Q 002970 48 LGIVFDLDETLIVANTMRSFEDRIEALLRKI 78 (862)
Q Consensus 48 L~lV~DLDeTLi~a~t~~~~e~ri~~l~~~~ 78 (862)
-.|++||||||+..... ..+..+++|+++.
T Consensus 10 ~li~~DlDGTLl~~~~~-~~~~~~~~l~~l~ 39 (275)
T 1xvi_A 10 LLVFSDLDGTLLDSHSY-DWQPAAPWLTRLR 39 (275)
T ss_dssp EEEEEECTTTTSCSSCC-SCCTTHHHHHHHH
T ss_pred eEEEEeCCCCCCCCCCc-CCHHHHHHHHHHH
Confidence 46999999999975321 1244566666554
No 228
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=52.60 E-value=4.4 Score=37.32 Aligned_cols=67 Identities=13% Similarity=0.019 Sum_probs=40.4
Q ss_pred HHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCCCccchhhhccCCCCCCcEEEEEcCC
Q 002970 174 LRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSGSRKSLFNVFQDGTCHPKMALVIDDR 253 (862)
Q Consensus 174 Lr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres~~~KsL~~lfp~~~~~~~~vVIIDDR 253 (862)
++..|+ +.-+.+.|.|++.+.++..+++.+.=+ .+|. . .+. ....+..++......++-+++|+|+
T Consensus 39 ~l~~l~---~~g~~~~i~T~~~~~~~~~~~~~~gl~-~~~~------~---~kp-k~~~~~~~~~~~~~~~~~~~~vGD~ 104 (164)
T 3e8m_A 39 GIFWAH---NKGIPVGILTGEKTEIVRRRAEKLKVD-YLFQ------G---VVD-KLSAAEELCNELGINLEQVAYIGDD 104 (164)
T ss_dssp HHHHHH---HTTCCEEEECSSCCHHHHHHHHHTTCS-EEEC------S---CSC-HHHHHHHHHHHHTCCGGGEEEECCS
T ss_pred HHHHHH---HCCCEEEEEeCCChHHHHHHHHHcCCC-Eeec------c---cCC-hHHHHHHHHHHcCCCHHHEEEECCC
Confidence 345665 455899999999999999999985422 1222 1 121 1112222222112566788888888
Q ss_pred c
Q 002970 254 L 254 (862)
Q Consensus 254 ~ 254 (862)
.
T Consensus 105 ~ 105 (164)
T 3e8m_A 105 L 105 (164)
T ss_dssp G
T ss_pred H
Confidence 6
No 229
>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10
Probab=52.53 E-value=6.9 Score=40.52 Aligned_cols=28 Identities=29% Similarity=0.471 Sum_probs=19.1
Q ss_pred eEEEeCcchhhhh-c-cccchHHHHHHHHhhh
Q 002970 49 GIVFDLDETLIVA-N-TMRSFEDRIEALLRKI 78 (862)
Q Consensus 49 ~lV~DLDeTLi~a-~-t~~~~e~ri~~l~~~~ 78 (862)
.|+|||||||+.. . ++ -+..+++|+++.
T Consensus 29 li~~DlDGTLl~~~~~~i--s~~~~~al~~l~ 58 (301)
T 2b30_A 29 LLLIDFDGTLFVDKDIKV--PSENIDAIKEAI 58 (301)
T ss_dssp EEEEETBTTTBCCTTTCS--CHHHHHHHHHHH
T ss_pred EEEEECCCCCcCCCCCcc--CHHHHHHHHHHH
Confidence 5899999999975 2 22 244566676554
No 230
>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15
Probab=50.94 E-value=8.7 Score=38.25 Aligned_cols=12 Identities=42% Similarity=0.504 Sum_probs=10.9
Q ss_pred eEEEeCcchhhh
Q 002970 49 GIVFDLDETLIV 60 (862)
Q Consensus 49 ~lV~DLDeTLi~ 60 (862)
.|++||||||+.
T Consensus 3 li~~DlDGTLl~ 14 (239)
T 1u02_A 3 LIFLDYDGTLVP 14 (239)
T ss_dssp EEEEECBTTTBC
T ss_pred EEEEecCCCCcC
Confidence 589999999996
No 231
>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}
Probab=50.09 E-value=4.8 Score=39.22 Aligned_cols=12 Identities=25% Similarity=0.545 Sum_probs=10.8
Q ss_pred eEEEeCcchhhh
Q 002970 49 GIVFDLDETLIV 60 (862)
Q Consensus 49 ~lV~DLDeTLi~ 60 (862)
+|+|||||||+.
T Consensus 8 av~fDlDGTL~d 19 (196)
T 2oda_A 8 ALLFGLSGCLVD 19 (196)
T ss_dssp CEEEETBTTTBC
T ss_pred EEEEcCCCceEe
Confidence 689999999985
No 232
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=47.38 E-value=9.9 Score=33.06 Aligned_cols=11 Identities=27% Similarity=0.498 Sum_probs=9.7
Q ss_pred eEEEeCcchhh
Q 002970 49 GIVFDLDETLI 59 (862)
Q Consensus 49 ~lV~DLDeTLi 59 (862)
+|+||+|+||.
T Consensus 4 ~i~~D~DgtL~ 14 (137)
T 2pr7_A 4 GLIVDYAGVLD 14 (137)
T ss_dssp EEEECSTTTTS
T ss_pred EEEEeccceec
Confidence 58999999994
No 233
>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}
Probab=46.98 E-value=6.8 Score=39.37 Aligned_cols=35 Identities=17% Similarity=-0.014 Sum_probs=23.1
Q ss_pred HHHhccceeEEEeCcchhhhhccccchHHHHHHHHhhh
Q 002970 41 TMLNLRCLGIVFDLDETLIVANTMRSFEDRIEALLRKI 78 (862)
Q Consensus 41 ~ll~~r~L~lV~DLDeTLi~a~t~~~~e~ri~~l~~~~ 78 (862)
.++..-+ .++|||||||+.... -++.-+++|+++.
T Consensus 9 ~~~~~~k-~i~~D~DGtL~~~~~--~~~~~~~~l~~l~ 43 (284)
T 2hx1_A 9 SLLPKYK-CIFFDAFGVLKTYNG--LLPGIENTFDYLK 43 (284)
T ss_dssp HHGGGCS-EEEECSBTTTEETTE--ECTTHHHHHHHHH
T ss_pred HHHhcCC-EEEEcCcCCcCcCCe--eChhHHHHHHHHH
Confidence 4455444 689999999997644 2455566666554
No 234
>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*
Probab=44.37 E-value=20 Score=38.75 Aligned_cols=34 Identities=15% Similarity=0.041 Sum_probs=22.7
Q ss_pred cChHHHHHHHhhhccccEEEEEEeCCc----HHHHHHHHHh
Q 002970 169 PAWEDLRSYLTARGRKRFEVYVCTMAE----RDYALEMWRL 205 (862)
Q Consensus 169 Pgv~eLr~FL~a~~sk~FEl~VyTmG~----R~YA~~I~rl 205 (862)
|+..+.+++|+ +.-+.+.+.||+. +.||..+.+.
T Consensus 32 p~a~~~l~~l~---~~g~~~~~vTNn~~~~~~~~~~~l~~~ 69 (352)
T 3kc2_A 32 AGASDALKLLN---RNKIPYILLTNGGGFSERARTEFISSK 69 (352)
T ss_dssp TTHHHHHHHHH---HTTCCEEEECSCCSSCHHHHHHHHHHH
T ss_pred cCHHHHHHHHH---HCCCEEEEEeCCCCCCchHHHHHHHHh
Confidence 56666555665 3456677888875 6788877753
No 235
>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*
Probab=43.21 E-value=8.4 Score=39.42 Aligned_cols=36 Identities=25% Similarity=0.265 Sum_probs=24.1
Q ss_pred HHHHhccceeEEEeCcchhhhhccccchHHHHHHHHhhh
Q 002970 40 LTMLNLRCLGIVFDLDETLIVANTMRSFEDRIEALLRKI 78 (862)
Q Consensus 40 ~~ll~~r~L~lV~DLDeTLi~a~t~~~~e~ri~~l~~~~ 78 (862)
..+++.-+ .|+|||||||+.... -++.-+++++.+.
T Consensus 15 ~~~~~~~k-~i~~D~DGTL~~~~~--~~~~~~~~l~~l~ 50 (306)
T 2oyc_A 15 RDVLGRAQ-GVLFDCDGVLWNGER--AVPGAPELLERLA 50 (306)
T ss_dssp HHHHHHCS-EEEECSBTTTEETTE--ECTTHHHHHHHHH
T ss_pred HHHHhhCC-EEEECCCCcEecCCc--cCcCHHHHHHHHH
Confidence 34555444 689999999997553 3556666666554
No 236
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=43.02 E-value=9.2 Score=37.91 Aligned_cols=28 Identities=21% Similarity=0.220 Sum_probs=17.8
Q ss_pred eEEEeCcchhhhhccccch-HHHHHHHHhhh
Q 002970 49 GIVFDLDETLIVANTMRSF-EDRIEALLRKI 78 (862)
Q Consensus 49 ~lV~DLDeTLi~a~t~~~~-e~ri~~l~~~~ 78 (862)
.|++||||||+... ..+ +..+++|+++.
T Consensus 7 li~~DlDGTLl~~~--~~i~~~~~~~l~~l~ 35 (227)
T 1l6r_A 7 LAAIDVDGNLTDRD--RLISTKAIESIRSAE 35 (227)
T ss_dssp EEEEEHHHHSBCTT--SCBCHHHHHHHHHHH
T ss_pred EEEEECCCCCcCCC--CcCCHHHHHHHHHHH
Confidence 58999999999753 223 33455555443
No 237
>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}
Probab=39.73 E-value=11 Score=37.62 Aligned_cols=27 Identities=26% Similarity=0.320 Sum_probs=18.1
Q ss_pred eEEEeCcchhhhhccccchHHHHHHHHhh
Q 002970 49 GIVFDLDETLIVANTMRSFEDRIEALLRK 77 (862)
Q Consensus 49 ~lV~DLDeTLi~a~t~~~~e~ri~~l~~~ 77 (862)
+++|||||||+.... .++.-++++++.
T Consensus 3 ~i~~D~DGtL~~~~~--~~~~~~~~l~~l 29 (263)
T 1zjj_A 3 AIIFDMDGVLYRGNR--AIPGVRELIEFL 29 (263)
T ss_dssp EEEEECBTTTEETTE--ECTTHHHHHHHH
T ss_pred EEEEeCcCceEeCCE--eCccHHHHHHHH
Confidence 689999999996543 244455555543
No 238
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=36.36 E-value=10 Score=38.71 Aligned_cols=14 Identities=29% Similarity=0.501 Sum_probs=12.3
Q ss_pred eEEEeCcchhhhhc
Q 002970 49 GIVFDLDETLIVAN 62 (862)
Q Consensus 49 ~lV~DLDeTLi~a~ 62 (862)
+|+||+||||+...
T Consensus 34 ~viFD~dGTL~ds~ 47 (287)
T 3a1c_A 34 AVIFDKTGTLTKGK 47 (287)
T ss_dssp EEEEECCCCCBCSC
T ss_pred EEEEeCCCCCcCCC
Confidence 79999999999764
No 239
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=32.61 E-value=13 Score=35.54 Aligned_cols=67 Identities=12% Similarity=0.065 Sum_probs=40.0
Q ss_pred HHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCCCccchhhhccCCCCCCcEEEEEcCC
Q 002970 174 LRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSGSRKSLFNVFQDGTCHPKMALVIDDR 253 (862)
Q Consensus 174 Lr~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLDP~g~lFg~~~l~~RIisres~~~KsL~~lfp~~~~~~~~vVIIDDR 253 (862)
+++.|+ +.-+.++|+|++.+.++..+++.++=+ .+|. . .+ .....+..+.......++-+++|+|+
T Consensus 61 ~l~~L~---~~g~~v~ivT~~~~~~~~~~l~~lgl~-~~~~-----~----~k-pk~~~~~~~~~~~g~~~~~~~~iGD~ 126 (188)
T 2r8e_A 61 GIRCAL---TSDIEVAIITGRKAKLVEDRCATLGIT-HLYQ-----G----QS-NKLIAFSDLLEKLAIAPENVAYVGDD 126 (188)
T ss_dssp HHHHHH---TTTCEEEEECSSCCHHHHHHHHHHTCC-EEEC-----S----CS-CSHHHHHHHHHHHTCCGGGEEEEESS
T ss_pred HHHHHH---HCCCeEEEEeCCChHHHHHHHHHcCCc-eeec-----C----CC-CCHHHHHHHHHHcCCCHHHEEEECCC
Confidence 344665 456999999999999999999986533 2333 1 11 12222333332111455667788876
Q ss_pred c
Q 002970 254 L 254 (862)
Q Consensus 254 ~ 254 (862)
.
T Consensus 127 ~ 127 (188)
T 2r8e_A 127 L 127 (188)
T ss_dssp G
T ss_pred H
Confidence 5
No 240
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=32.29 E-value=14 Score=34.17 Aligned_cols=13 Identities=23% Similarity=0.215 Sum_probs=11.1
Q ss_pred eEEEeCcchhhhh
Q 002970 49 GIVFDLDETLIVA 61 (862)
Q Consensus 49 ~lV~DLDeTLi~a 61 (862)
+++||+|+||+..
T Consensus 3 ~v~~D~DGtL~~~ 15 (179)
T 3l8h_A 3 LIILDRDGVVNQD 15 (179)
T ss_dssp EEEECSBTTTBCC
T ss_pred EEEEcCCCccccC
Confidence 5899999999954
No 241
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=30.17 E-value=20 Score=34.61 Aligned_cols=30 Identities=17% Similarity=0.078 Sum_probs=24.9
Q ss_pred HHHHhhhccccEEEEEEeCCcHHHHHHHHHhhC
Q 002970 175 RSYLTARGRKRFEVYVCTMAERDYALEMWRLLD 207 (862)
Q Consensus 175 r~FL~a~~sk~FEl~VyTmG~R~YA~~I~rlLD 207 (862)
+..|+ ..-|.+.|.|++.+..+..+++.+.
T Consensus 55 l~~L~---~~g~~~~ivTn~~~~~~~~~l~~lg 84 (191)
T 3n1u_A 55 LKLLM---AAGIQVAIITTAQNAVVDHRMEQLG 84 (191)
T ss_dssp HHHHH---HTTCEEEEECSCCSHHHHHHHHHHT
T ss_pred HHHHH---HCCCeEEEEeCcChHHHHHHHHHcC
Confidence 45665 4568999999999999999999854
No 242
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=30.04 E-value=43 Score=31.82 Aligned_cols=14 Identities=21% Similarity=0.275 Sum_probs=11.6
Q ss_pred eeEEEeCcchhhhh
Q 002970 48 LGIVFDLDETLIVA 61 (862)
Q Consensus 48 L~lV~DLDeTLi~a 61 (862)
=.++||+|+||+..
T Consensus 27 k~vifD~DGTL~~~ 40 (188)
T 2r8e_A 27 RLLILDVDGVLSDG 40 (188)
T ss_dssp SEEEECCCCCCBCS
T ss_pred CEEEEeCCCCcCCC
Confidence 36899999999953
No 243
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=29.65 E-value=17 Score=35.16 Aligned_cols=13 Identities=23% Similarity=0.342 Sum_probs=11.4
Q ss_pred eEEEeCcchhhhh
Q 002970 49 GIVFDLDETLIVA 61 (862)
Q Consensus 49 ~lV~DLDeTLi~a 61 (862)
+++||+|+||+..
T Consensus 21 ~vifD~DGtL~~~ 33 (191)
T 3n1u_A 21 CLICDVDGVLSDG 33 (191)
T ss_dssp EEEECSTTTTBCS
T ss_pred EEEEeCCCCCCCC
Confidence 7899999999864
No 244
>2qvw_A GLP_546_48378_50642; dicer, RNAI,pseudo-merohedral twin, hydrolase; 3.00A {Giardia intestinalis} PDB: 2ffl_A
Probab=28.16 E-value=7.9 Score=46.40 Aligned_cols=41 Identities=12% Similarity=0.104 Sum_probs=33.7
Q ss_pred CCc-hHHHHHHHHhcCCCeEEEEeeecCCCceEEEEEEECCEEEEEeecCCHHHHH---------HHHHHHHHHHHHh
Q 002970 610 ETP-SGVLQDIAMKCGTKVEFRPALVASTELQFSIEAWFAGEKIGEGIGRTRREAQ---------RQAAEGSIKHLAN 677 (862)
Q Consensus 610 ~n~-KS~LQE~~QK~~~~l~Y~~v~~~~Hdk~Ftv~V~i~G~~~G~G~GkSKKeAE---------q~AA~~AL~~L~~ 677 (862)
.+| |+.||||+| |+.++.|.|.+.+.|+ -.||+.||++|..
T Consensus 447 ~Dp~Kt~LqE~~q---------------------------~~~ia~~v~~~~~~ak~~~~~~~~~~~aa~~aL~~l~~ 497 (756)
T 2qvw_A 447 PDAVTKASKRVCM---------------------------GEAGAHEFRSLVDYACEQGISVFCSSRVSTMFLERLRD 497 (756)
T ss_dssp CHHHHHHHHHHHT---------------------------SCCCHHHHHHHHHHTTTTTCCCBSSSHHHHHHHHHHHH
T ss_pred cCchHHHHHHHHh---------------------------ccchhhhhhhhhhHHhhhccccchhhHHHHHHHHhhcc
Confidence 456 999999987 4445788999999998 6899999988854
No 245
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=27.68 E-value=38 Score=30.91 Aligned_cols=14 Identities=21% Similarity=0.176 Sum_probs=11.9
Q ss_pred eEEEeCcchhhhhc
Q 002970 49 GIVFDLDETLIVAN 62 (862)
Q Consensus 49 ~lV~DLDeTLi~a~ 62 (862)
+++||+|+||+...
T Consensus 6 ~vifD~DGTL~~~~ 19 (164)
T 3e8m_A 6 LILTDIDGVWTDGG 19 (164)
T ss_dssp EEEECSTTTTSSSE
T ss_pred EEEEcCCCceEcCc
Confidence 68999999999643
No 246
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=26.10 E-value=21 Score=34.44 Aligned_cols=25 Identities=16% Similarity=0.134 Sum_probs=18.1
Q ss_pred HHHHhhhccccEEEEEEeCCcHHHHHHHHH
Q 002970 175 RSYLTARGRKRFEVYVCTMAERDYALEMWR 204 (862)
Q Consensus 175 r~FL~a~~sk~FEl~VyTmG~R~YA~~I~r 204 (862)
+..|+ ..-+.+.|.|.. ..+..+++
T Consensus 45 L~~Lk---~~Gi~~~I~Tg~--~~~~~~l~ 69 (168)
T 3ewi_A 45 ISLLK---KSGIEVRLISER--ACSKQTLS 69 (168)
T ss_dssp HHHHH---HTTCEEEEECSS--CCCHHHHH
T ss_pred HHHHH---HCCCEEEEEeCc--HHHHHHHH
Confidence 34565 456788899977 67778887
No 247
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=25.49 E-value=22 Score=33.74 Aligned_cols=12 Identities=33% Similarity=0.648 Sum_probs=10.8
Q ss_pred eEEEeCcchhhh
Q 002970 49 GIVFDLDETLIV 60 (862)
Q Consensus 49 ~lV~DLDeTLi~ 60 (862)
+|+||+|+||+.
T Consensus 5 ~vifD~DgtL~~ 16 (189)
T 3ib6_A 5 HVIWDMGETLNT 16 (189)
T ss_dssp EEEECTBTTTBC
T ss_pred EEEEcCCCceee
Confidence 689999999976
No 248
>3k6q_A Putative ligand binding protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.80A {Syntrophomonas wolfei subsp}
Probab=25.38 E-value=1.5e+02 Score=28.80 Aligned_cols=61 Identities=16% Similarity=0.167 Sum_probs=45.4
Q ss_pred CchHHHHHHHHhcCCCeEEEEeeecCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHhhhh
Q 002970 611 TPSGVLQDIAMKCGTKVEFRPALVASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLANVYM 680 (862)
Q Consensus 611 n~KS~LQE~~QK~~~~l~Y~~v~~~~Hdk~Ftv~V~i~G~~~G~G~GkSKKeAEq~AA~~AL~~L~~~~~ 680 (862)
.....|-|++ ..++..++.+.+ +. ++.+.+++-.+ .|.|.|+.+|....++.+++-- +.|+
T Consensus 39 is~~lL~~~L--~~y~f~~e~i~E---dG--s~t~~l~eldi-~~~g~T~eeA~~~li~~l~eYA-edY~ 99 (139)
T 3k6q_A 39 FSEQIIKDLL--QDLKIHAELSKE---DG--IIIGTIDGFDL-VVSGESEQEVIQKLAEDLLEYA-QDYM 99 (139)
T ss_dssp EEHHHHHHHT--TTCCEEEEEEEE---TT--EEEEEETTTCC-EEEESSHHHHHHHHHHHHHHHH-HHHH
T ss_pred eeHHHHHHHH--hcccCceEEEec---CC--eEEEEecCcee-EeeCCCHHHHHHHHHHHHHHHH-HHHH
Confidence 4577888888 556666666655 23 57888999887 8999999999999988876654 3343
No 249
>2qv6_A MJ0145, GTP cyclohydrolase III, MJGC; enzyme, FAPY; HET: GTP; 2.00A {Methanocaldococcus jannaschii}
Probab=24.07 E-value=60 Score=34.41 Aligned_cols=28 Identities=32% Similarity=0.456 Sum_probs=24.4
Q ss_pred EEEEEeecCCHHHHHHHHHHHHHHHHHhh
Q 002970 650 EKIGEGIGRTRREAQRQAAEGSIKHLANV 678 (862)
Q Consensus 650 ~~~G~G~GkSKKeAEq~AA~~AL~~L~~~ 678 (862)
-++|.|.|+|-.+|+.+| +.||+.++..
T Consensus 212 lkvGIGiG~TA~~Ae~~A-~~ALe~~R~~ 239 (268)
T 2qv6_A 212 LKAGIGIGRTAEDASNLA-DIGLEKIRGK 239 (268)
T ss_dssp EEEEEEEESSHHHHHHHH-HHHHHHHHTT
T ss_pred EEEeeccCCCHHHHHHHH-HHHHHHHHhc
Confidence 467999999999999988 8899988764
No 250
>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19
Probab=21.99 E-value=46 Score=32.11 Aligned_cols=14 Identities=29% Similarity=0.361 Sum_probs=11.7
Q ss_pred eeEEEeCcchhhhh
Q 002970 48 LGIVFDLDETLIVA 61 (862)
Q Consensus 48 L~lV~DLDeTLi~a 61 (862)
=.++||+|+||+..
T Consensus 32 k~i~~D~DGtl~~~ 45 (218)
T 2o2x_A 32 PALFLDRDGTINVD 45 (218)
T ss_dssp CCEEECSBTTTBCC
T ss_pred CEEEEeCCCCcCCC
Confidence 35889999999965
Done!