BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002971
(862 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O81742|APBLC_ARATH Beta-adaptin-like protein C OS=Arabidopsis thaliana GN=BETAC-AD
PE=1 SV=2
Length = 893
Score = 1492 bits (3862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 740/862 (85%), Positives = 786/862 (91%), Gaps = 11/862 (1%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP
Sbjct: 43 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 102
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLCDPLQ+CLKDDDPYVRKTAAICVAKL+DINAELVEDRG
Sbjct: 103 LIRALAVRTMGCIRVDKITEYLCDPLQKCLKDDDPYVRKTAAICVAKLFDINAELVEDRG 162
Query: 121 FLESLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVF 180
FLE+LKDLISDNNPMVVANAVAALAEI+ENS+ PIFEI S L+KLLTALNECTEWGQVF
Sbjct: 163 FLEALKDLISDNNPMVVANAVAALAEIQENSTSPIFEINSTILTKLLTALNECTEWGQVF 222
Query: 181 ILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCK 240
ILDALSRYKA+D REAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDV+RNLCK
Sbjct: 223 ILDALSRYKASDPREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVIRNLCK 282
Query: 241 KMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIM 300
KMAPPLVTLLSAEPEIQYVALRNINLIVQ+RPTILAHEIKVFFCKYNDPIYVKMEKLEIM
Sbjct: 283 KMAPPLVTLLSAEPEIQYVALRNINLIVQKRPTILAHEIKVFFCKYNDPIYVKMEKLEIM 342
Query: 301 IKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIK 360
IKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIK
Sbjct: 343 IKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIK 402
Query: 361 VNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNA 420
VNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNA
Sbjct: 403 VNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNA 462
Query: 421 DELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRD 480
DELLESFLE+FPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRD
Sbjct: 463 DELLESFLENFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRD 522
Query: 481 RAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPEAF 540
RAYIYWRLLSTDPEAAKDVVLAEKPVI+DDSNQLDPSLLDELLANI+TLSSVYHKPPEAF
Sbjct: 523 RAYIYWRLLSTDPEAAKDVVLAEKPVITDDSNQLDPSLLDELLANISTLSSVYHKPPEAF 582
Query: 541 VTRVKTTASRTDDEDYPNGSEQGYSDAPTHVADEGASPQTSSSNAPYAATRQPAPPPAAP 600
VTR+KTT +T+DEDY GSE GY +A + D ASP S+ Y AP
Sbjct: 583 VTRLKTTVQKTEDEDYVEGSETGYPEASGNPVDGAASP---SATTGYVTKLAAAP----- 634
Query: 601 VSPPVPDLLGDLIGLDNSAAIVPADQAAASPVPALPVVLPASTGQGLQIGAELTRQDGQV 660
PVPDLLGDL+G DN AAIVP D+ LPVVLPAS GQGLQI A+LTRQDGQV
Sbjct: 635 --APVPDLLGDLMGSDN-AAIVPVDEPTTPSGRPLPVVLPASKGQGLQISAQLTRQDGQV 691
Query: 661 FYSMLFENNTQTPLDGFMIQFNKNTFGLAAGGALQVPQLQPGTSGRTLLPMVLFQNMSAG 720
FYSML ENN+Q+ LDGFMIQFNKN+FGLAA G+LQVP LQPG S RT++PMVL QNMS G
Sbjct: 692 FYSMLLENNSQSLLDGFMIQFNKNSFGLAAVGSLQVPPLQPGASARTMMPMVLSQNMSTG 751
Query: 721 PPSSLLQVAVKNNQQPVWYFNDKISLHVLFTEDGRMERGSFLETWRSLPDSNEVLKDLPG 780
SS+LQVAVKNNQQPVWYF DKI L+ LF+EDGRMERG+FLETW+SLPDSNEV K+ PG
Sbjct: 752 STSSVLQVAVKNNQQPVWYFEDKIVLNALFSEDGRMERGTFLETWKSLPDSNEVQKEFPG 811
Query: 781 VVVSNVEATLDLLAASNMFFIAKRKNANQDVFYFSAKIPPGVPFLIELTTVIGNPGVKCA 840
+ +++VE+TLDLLAASNMFFIAKRKN NQDV Y SAK+P G+PFLIELT ++G PG+KCA
Sbjct: 812 ITITSVESTLDLLAASNMFFIAKRKNGNQDVLYLSAKVPRGIPFLIELTAIVGQPGLKCA 871
Query: 841 IKTPNPDIASLFFEAIETLLKA 862
+KTP P+IA LFFEA+E L KA
Sbjct: 872 VKTPTPEIAPLFFEAVEILFKA 893
>sp|Q9SUS3|APBLB_ARATH Beta-adaptin-like protein B OS=Arabidopsis thaliana GN=BETAB-AD
PE=1 SV=1
Length = 894
Score = 1471 bits (3809), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 748/862 (86%), Positives = 791/862 (91%), Gaps = 10/862 (1%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP
Sbjct: 43 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 102
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLCDPLQ+CLKDDDPYVRKTAAICVAKL+DINAELVEDRG
Sbjct: 103 LIRALAVRTMGCIRVDKITEYLCDPLQKCLKDDDPYVRKTAAICVAKLFDINAELVEDRG 162
Query: 121 FLESLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVF 180
FLE+LKDLISDNNPMVVANAVAALAEI+ENSS PIFEI S TL+KLLTALNECTEWGQVF
Sbjct: 163 FLEALKDLISDNNPMVVANAVAALAEIQENSSSPIFEINSTTLTKLLTALNECTEWGQVF 222
Query: 181 ILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCK 240
ILDALS+YKAAD REAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDV+RNLCK
Sbjct: 223 ILDALSKYKAADPREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVIRNLCK 282
Query: 241 KMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIM 300
KMAPPLVTLLSAEPEIQYVALRNINLIVQ+RPTILAHEIKVFFCKYNDPIYVKMEKLEIM
Sbjct: 283 KMAPPLVTLLSAEPEIQYVALRNINLIVQKRPTILAHEIKVFFCKYNDPIYVKMEKLEIM 342
Query: 301 IKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIK 360
IKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIK
Sbjct: 343 IKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIK 402
Query: 361 VNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNA 420
VNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNA
Sbjct: 403 VNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNA 462
Query: 421 DELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRD 480
DELLESFLE+FPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRD
Sbjct: 463 DELLESFLENFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRD 522
Query: 481 RAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPEAF 540
RAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELL NI+TLSSVYHKPPEAF
Sbjct: 523 RAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLTNISTLSSVYHKPPEAF 582
Query: 541 VTRVKTTASRTDDEDYPNGSEQGYSDAPTHVADEGASPQTSSSNAPYAATRQPAPPPAAP 600
VTR+KTT +T+DED+ GSE GYS ++ D ASP N P + RQPAP AP
Sbjct: 583 VTRLKTTVQKTEDEDFAEGSEAGYSS--SNPVDSAASP---PGNIPQPSGRQPAPAVPAP 637
Query: 601 VSPPVPDLLGDLIGLDNSAAIVPADQAAASPVPALPVVLPASTGQGLQIGAELTRQDGQV 660
V DLLGDL+GLDN AAIVP D P LPVV+PAS+GQGLQI A+L+R+DGQV
Sbjct: 638 VP----DLLGDLMGLDN-AAIVPVDDPITQSGPPLPVVVPASSGQGLQISAQLSRKDGQV 692
Query: 661 FYSMLFENNTQTPLDGFMIQFNKNTFGLAAGGALQVPQLQPGTSGRTLLPMVLFQNMSAG 720
FYSMLFENN+Q+ LDGFMIQFNKNTFGLAA G+LQ+P L P TS RT+LPMVLFQNMSAG
Sbjct: 693 FYSMLFENNSQSVLDGFMIQFNKNTFGLAAAGSLQIPPLHPATSARTMLPMVLFQNMSAG 752
Query: 721 PPSSLLQVAVKNNQQPVWYFNDKISLHVLFTEDGRMERGSFLETWRSLPDSNEVLKDLPG 780
PPSSLLQVAVKNNQQPVWYF DKI LH LF EDGRMERG+FLETWRSLPDSNEVLK+ PG
Sbjct: 753 PPSSLLQVAVKNNQQPVWYFTDKIILHALFGEDGRMERGTFLETWRSLPDSNEVLKEFPG 812
Query: 781 VVVSNVEATLDLLAASNMFFIAKRKNANQDVFYFSAKIPPGVPFLIELTTVIGNPGVKCA 840
+ +++VE+T++LL A NMFFIAKRKN NQDV Y SAK P VPFLIELT ++G PG+KCA
Sbjct: 813 ITITSVESTIELLTAFNMFFIAKRKNGNQDVIYLSAKDPRDVPFLIELTAMVGQPGLKCA 872
Query: 841 IKTPNPDIASLFFEAIETLLKA 862
+KTP P+IA LFFEA+E L KA
Sbjct: 873 VKTPTPEIAPLFFEALELLFKA 894
>sp|O35643|AP1B1_MOUSE AP-1 complex subunit beta-1 OS=Mus musculus GN=Ap1b1 PE=1 SV=2
Length = 943
Score = 972 bits (2512), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/911 (57%), Positives = 643/911 (70%), Gaps = 59/911 (6%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVS+LF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVNTFVKD +DPNP
Sbjct: 41 MTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLC+PL++CLKD+DPYVRKTAA+CVAKL+DINA+LVED+G
Sbjct: 101 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQG 160
Query: 121 FLESLKDLISDNNPMVVANAVAALAEI-EENSSRPIFEITSHTLSKLLTALNECTEWGQV 179
FL++LKDLISD+NPMVVANAVAAL+EI E + S + ++ +++KLLTALNECTEWGQ+
Sbjct: 161 FLDTLKDLISDSNPMVVANAVAALSEIAESHPSSNLLDLNPQSINKLLTALNECTEWGQI 220
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITST-DVVRNL 238
FILD L+ Y D REA++I ERVTPRL HAN AVVLSAVK++++ ME+++ D L
Sbjct: 221 FILDCLANYMPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYATL 280
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
KK+APPLVTLLSAEPE+QYVALRNINLIVQ+RP IL HE+KVFF KYNDPIYVK+EKL+
Sbjct: 281 LKKLAPPLVTLLSAEPELQYVALRNINLIVQKRPEILKHEMKVFFVKYNDPIYVKLEKLD 340
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
IMI+LAS NI QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S LL+LI+
Sbjct: 341 IMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ 400
Query: 359 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 418
KVNYVVQEAI+VIKDIFR+YPN YES+IATLCE+LD+LDEPEA+A+MIWI+GEYAERID
Sbjct: 401 TKVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERID 460
Query: 419 NADELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDL 478
NADELLESFLE F +E QVQLQLLTA VKLFLKKPTE Q+++Q VL+ AT ++DNPDL
Sbjct: 461 NADELLESFLEGFHDESTQVQLQLLTAIVKLFLKKPTET-QELVQQVLSLATQDSDNPDL 519
Query: 479 RDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPE 538
RDR YIYWRLLSTDP AAK+VVLAEKP+IS++++ ++P+LLDEL+ I TL+SVYHKPP
Sbjct: 520 RDRGYIYWRLLSTDPVAAKEVVLAEKPLISEETDLIEPTLLDELICYIGTLASVYHKPPN 579
Query: 539 AFVT------------RVKTTASRTDDEDYPNGSEQGYSDAPTHVADEGASPQTSSSNAP 586
AFV R ++ S E P G+ G D P + +G +
Sbjct: 580 AFVEGGRGVVHKSLPPRTASSESTESPETAPAGAPAG--DQPDVIPAQGDLLGDLLNLDL 637
Query: 587 YAATRQPAPPPAAPVSPPVPDLLG----DLIGLDNSAAI--------------VPADQA- 627
P P A+ V DLLG LIG N A P
Sbjct: 638 GPPVSGP-PLAASSVQMGAVDLLGGGLDSLIGDSNFGAPSASVAAAPAPARLGAPISSGL 696
Query: 628 -------------AASPVPALPVVLPASTGQGLQIGAELTRQDGQVFYSMLFENNTQTPL 674
+ S V V LPA +GL+I TRQ G + + N +
Sbjct: 697 SDLFDLTSGVGTLSGSYVAPKAVWLPAMKAKGLEISGTFTRQAGSISMDLQLTNKALQVM 756
Query: 675 DGFMIQFNKNTFGLAAGGALQVP-QLQPGTSGRTLLPMVLFQNMSAGPPSSLLQVAVKNN 733
F IQFN+N+FGLA LQV L P + LP+ ++ P + LQVAVKNN
Sbjct: 757 TDFAIQFNRNSFGLAPAAPLQVHVPLSPNQTVEISLPLNTVGSVLKMEPLNNLQVAVKNN 816
Query: 734 QQPVWYFNDKISLHVLFTEDGRMERGSFLETWRSLPDSNEV---LKDLPGVVVSNVEATL 790
V+YF+ LHVLF EDG+M+R FL TW+ + + NE ++D P N EA
Sbjct: 817 ID-VFYFSTLYPLHVLFVEDGKMDRQMFLATWKDIANENEAQFQIRDCP----LNTEAAS 871
Query: 791 DLLAASNMFFIAKRKNANQDVFYFSAKIPPGVPFLIELTTVIGNPGVKCAIKTPNPDIAS 850
+ L +SN+F +AKR QD+ Y S K+ G+ L EL GNP ++K P+++
Sbjct: 872 NKLQSSNIFTVAKRNVEGQDMLYQSLKLTNGIWVLAELRIQPGNPSFTLSLKCRAPEVSQ 931
Query: 851 LFFEAIETLLK 861
++A ET+LK
Sbjct: 932 HVYQAYETILK 942
>sp|Q10567|AP1B1_HUMAN AP-1 complex subunit beta-1 OS=Homo sapiens GN=AP1B1 PE=1 SV=2
Length = 949
Score = 971 bits (2510), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/921 (56%), Positives = 651/921 (70%), Gaps = 73/921 (7%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVS+LF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVNTFVKD +DPNP
Sbjct: 41 MTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLC+PL++CLKD+DPYVRKTAA+CVAKL+DINA+LVED+G
Sbjct: 101 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQG 160
Query: 121 FLESLKDLISDNNPMVVANAVAALAEI-EENSSRPIFEITSHTLSKLLTALNECTEWGQV 179
FL++LKDLISD+NPMVVANAVAAL+EI E + S + ++ +++KLLTALNECTEWGQ+
Sbjct: 161 FLDTLKDLISDSNPMVVANAVAALSEIAESHPSSNLLDLNPQSINKLLTALNECTEWGQI 220
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITST-DVVRNL 238
FILD L+ Y D REA++I ERVTPRL HAN AVVLSAVK++++ ME+++ D L
Sbjct: 221 FILDCLANYMPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYGTL 280
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
KK+APPLVTLLSAEPE+QYVALRNINLIVQ+RP IL HE+KVFF KYNDPIYVK+EKL+
Sbjct: 281 LKKLAPPLVTLLSAEPELQYVALRNINLIVQKRPEILKHEMKVFFVKYNDPIYVKLEKLD 340
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
IMI+LAS NI QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S LL+LI+
Sbjct: 341 IMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ 400
Query: 359 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 418
KVNYVVQEAI+VIKDIFR+YPN YES+IATLCE+LD+LDEPEA+A+MIWI+GEYAERID
Sbjct: 401 TKVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERID 460
Query: 419 NADELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDL 478
NADELLESFLE F +E QVQLQLLTA VKLFLKKPTE Q+++Q VL+ AT ++DNPDL
Sbjct: 461 NADELLESFLEGFHDESTQVQLQLLTAIVKLFLKKPTET-QELVQQVLSLATQDSDNPDL 519
Query: 479 RDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPE 538
RDR YIYWRLLSTDP AAK+VVLAEKP+IS++++ ++P+LLDEL+ I TL+SVYHKPP
Sbjct: 520 RDRGYIYWRLLSTDPVAAKEVVLAEKPLISEETDLIEPTLLDELICYIGTLASVYHKPPS 579
Query: 539 AFVT------------RVKTTASRTDDEDYPNGSEQGYSDAPTHVADEG----------- 575
AFV R ++ S E P G+ G + P + +G
Sbjct: 580 AFVEGGRGVVHKSLPPRTASSESAESPETAPTGAPPG--EQPDVIPAQGDLLGDLLNLDL 637
Query: 576 ----ASPQTSSSNAPYAA---------------------TRQPAPPPA---APVSPPVPD 607
+ P ++S+ A T APP A A + P+
Sbjct: 638 GPPVSGPPLATSSVQMGAVDLLGGGLDSLMGDEPEGIGGTNFVAPPTAAVPANLGAPIGS 697
Query: 608 LLGDLIGLDNSAAIVPADQAAASPVPALPVVLPASTGQGLQIGAELTRQDGQVFYSMLFE 667
L DL L + + + S V V LPA +GL+I TRQ G + +
Sbjct: 698 GLSDLFDLTSGVGTL-----SGSYVAPKAVWLPAMKAKGLEISGTFTRQVGSISMDLQLT 752
Query: 668 NNTQTPLDGFMIQFNKNTFGLAAGGALQVPQ-LQPGTSGRTLLPMVLFQNMSAGPPSSLL 726
N + F IQFN+N+FGLA LQV L P + LP+ ++ P + L
Sbjct: 753 NKALQVMTDFAIQFNRNSFGLAPATPLQVHAPLSPNQTVEISLPLSTVGSVMKMEPLNNL 812
Query: 727 QVAVKNNQQPVWYFNDKISLHVLFTEDGRMERGSFLETWRSLPDSNEV---LKDLPGVVV 783
QVAVKNN V+YF+ LH+LF EDG+M+R FL TW+ +P+ NE ++D P
Sbjct: 813 QVAVKNNID-VFYFSTLYPLHILFVEDGKMDRQMFLATWKDIPNENEAQFQIRDCP---- 867
Query: 784 SNVEATLDLLAASNMFFIAKRKNANQDVFYFSAKIPPGVPFLIELTTVIGNPG---VKCA 840
N EA L +SN+F +AKR QD+ Y S K+ G+ L EL GNP ++ +
Sbjct: 868 LNAEAASSKLQSSNIFTVAKRNVEGQDMLYQSLKLTNGIWVLAELRIQPGNPSCTDLELS 927
Query: 841 IKTPNPDIASLFFEAIETLLK 861
+K P+++ ++A ET+LK
Sbjct: 928 LKCRAPEVSQHVYQAYETILK 948
>sp|P63009|AP2B1_BOVIN AP-2 complex subunit beta OS=Bos taurus GN=AP2B1 PE=1 SV=2
Length = 937
Score = 951 bits (2458), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/911 (55%), Positives = 636/911 (69%), Gaps = 65/911 (7%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVSSLF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVN+FVKD +DPNP
Sbjct: 41 MTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLC+PL++CLKD+DPYVRKTAA+CVAKL+DINA++VED+G
Sbjct: 101 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQG 160
Query: 121 FLESLKDLISDNNPMVVANAVAALAEIEENS-SRPIFEITSHTLSKLLTALNECTEWGQV 179
FL+SL+DLI+D+NPMVVANAVAAL+EI E+ + + ++ ++KLLTALNECTEWGQ+
Sbjct: 161 FLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQI 220
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELI-TSTDVVRNL 238
FILD LS Y D REA++I ERVTPRL HAN AVVLSAVK++++ +EL+ +D L
Sbjct: 221 FILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKESDYYNML 280
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
KK+APPLVTLLS EPE+QYVALRNINLIVQ+RP IL EIKVFF KYNDPIYVK+EKL+
Sbjct: 281 LKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLD 340
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
IMI+LAS NI QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S LL+LI+
Sbjct: 341 IMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ 400
Query: 359 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 418
KVNYVVQEAI+VI+DIFR+YPN YESIIATLCE+LD+LDEP+A+A+MIWI+GEYAERID
Sbjct: 401 TKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERID 460
Query: 419 NADELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDL 478
NADELLESFLE F +E QVQL LLTA VKLFLKKP+E Q+++Q VL+ AT ++DNPDL
Sbjct: 461 NADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSET-QELVQQVLSLATQDSDNPDL 519
Query: 479 RDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPE 538
RDR YIYWRLLSTDP AK+VVL+EKP+IS++++ ++P+LLDEL+ +I +L+SVYHKPP
Sbjct: 520 RDRGYIYWRLLSTDPVTAKEVVLSEKPLISEETDLIEPTLLDELICHIGSLASVYHKPPN 579
Query: 539 AFV--------TRVKTTASRTDDEDYPNGSEQGYS-DAPTHVADEGAS------------ 577
AFV + TD D P G+ + + P + +G
Sbjct: 580 AFVEGSHGIHRKHLPIHHGSTDAGDSPVGTTTATNLEQPQVIPSQGDLLGDLLNLDLGPP 639
Query: 578 ---PQTSS-----------------------SNAPYAATRQPAPPPAAPVSPPVPDLLGD 611
PQ SS S+ P AT P+P PA V L D
Sbjct: 640 VNVPQVSSMQMGAVDLLGGGLDSLVGQSFIPSSVP--ATFAPSPTPAV-----VSSGLND 692
Query: 612 LIGLDNSAAIVPADQAAASPVPALPVVLPASTGQGLQIGAELTRQDGQVFYSMLFENNTQ 671
L L + P A V LPA +GL+I T + G ++ M F N
Sbjct: 693 LFELSTGIGMAPGGYVAPK-----AVWLPAVKAKGLEISGTFTHRQGHIYMEMNFTNKAL 747
Query: 672 TPLDGFMIQFNKNTFGLAAGGALQVPQ-LQPGTSGRTLLPMVLFQNMSAGPPSSLLQVAV 730
+ F IQFNKN+FG+ L + L P S LP+ + P + LQVAV
Sbjct: 748 QHMTDFAIQFNKNSFGVIPSTPLAIHTPLMPNQSIDVSLPLNTLGPVMKMEPLNNLQVAV 807
Query: 731 KNNQQPVWYFNDKISLHVLFTEDGRMERGSFLETWRSLPDSNEVLKDLPGVVVSNVEATL 790
KNN V+YF+ I L+VLF EDG+MER FL TW+ +P+ NE+ + + N +
Sbjct: 808 KNNID-VFYFSCLIPLNVLFVEDGKMERQVFLATWKDIPNENELQFQIKECHL-NADTVS 865
Query: 791 DLLAASNMFFIAKRKNANQDVFYFSAKIPPGVPFLIELTTVIGNPGVKCAIKTPNPDIAS 850
L +N++ IAKR QD+ Y S K+ G+ L EL GNP ++K P+++
Sbjct: 866 SKLQNNNVYTIAKRNVEGQDMLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVSQ 925
Query: 851 LFFEAIETLLK 861
++ +++LK
Sbjct: 926 YIYQVYDSILK 936
>sp|P62944|AP2B1_RAT AP-2 complex subunit beta OS=Rattus norvegicus GN=Ap2b1 PE=1 SV=1
Length = 937
Score = 950 bits (2455), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/911 (55%), Positives = 636/911 (69%), Gaps = 65/911 (7%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVSSLF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVN+FVKD +DPNP
Sbjct: 41 MTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLC+PL++CLKD+DPYVRKTAA+CVAKL+DINA++VED+G
Sbjct: 101 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQG 160
Query: 121 FLESLKDLISDNNPMVVANAVAALAEIEENS-SRPIFEITSHTLSKLLTALNECTEWGQV 179
FL+SL+DLI+D+NPMVVANAVAAL+EI E+ + + ++ ++KLLTALNECTEWGQ+
Sbjct: 161 FLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQI 220
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELI-TSTDVVRNL 238
FILD LS Y D REA++I ERVTPRL HAN AVVLSAVK++++ +EL+ +D L
Sbjct: 221 FILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNML 280
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
KK+APPLVTLLS EPE+QYVALRNINLIVQ+RP IL EIKVFF KYNDPIYVK+EKL+
Sbjct: 281 LKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLD 340
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
IMI+LAS NI QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S LL+LI+
Sbjct: 341 IMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ 400
Query: 359 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 418
KVNYVVQEAI+VI+DIFR+YPN YESIIATLCE+LD+LDEP+A+A+MIWI+GEYAERID
Sbjct: 401 TKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERID 460
Query: 419 NADELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDL 478
NADELLESFLE F +E QVQL LLTA VKLFLKKP+E Q+++Q VL+ AT ++DNPDL
Sbjct: 461 NADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSET-QELVQQVLSLATQDSDNPDL 519
Query: 479 RDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPE 538
RDR YIYWRLLSTDP AK+VVL+EKP+IS++++ ++P+LLDEL+ +I +L+SVYHKPP
Sbjct: 520 RDRGYIYWRLLSTDPVTAKEVVLSEKPLISEETDLIEPTLLDELICHIGSLASVYHKPPN 579
Query: 539 AFV--------TRVKTTASRTDDEDYPNGSEQGYS-DAPTHVADEGAS------------ 577
AFV + TD D P G+ + + P + +G
Sbjct: 580 AFVEGSHGIHRKHLPIHHGSTDAGDSPVGTTTATNLEQPQVIPSQGDLLGDLLNLDLGPP 639
Query: 578 ---PQTSS-----------------------SNAPYAATRQPAPPPAAPVSPPVPDLLGD 611
PQ SS S+ P AT P+P PA V L D
Sbjct: 640 VNVPQVSSMQMGAVDLLGGGLDSLVGQSFIPSSVP--ATFAPSPTPAV-----VSSGLND 692
Query: 612 LIGLDNSAAIVPADQAAASPVPALPVVLPASTGQGLQIGAELTRQDGQVFYSMLFENNTQ 671
L L + P A V LPA +GL+I T + G ++ M F N
Sbjct: 693 LFELSTGIGMAPGGYVAPK-----AVWLPAVKAKGLEISGTFTHRQGHIYMEMNFTNKAL 747
Query: 672 TPLDGFMIQFNKNTFGLAAGGALQVPQ-LQPGTSGRTLLPMVLFQNMSAGPPSSLLQVAV 730
+ F IQFNKN+FG+ L + L P S LP+ + P + LQVAV
Sbjct: 748 QHMTDFAIQFNKNSFGVIPSTPLAIHTPLMPNQSIDVSLPLNTLGPVMKMEPLNNLQVAV 807
Query: 731 KNNQQPVWYFNDKISLHVLFTEDGRMERGSFLETWRSLPDSNEVLKDLPGVVVSNVEATL 790
KNN V+YF+ I L+VLF EDG+MER FL TW+ +P+ NE+ + + N +
Sbjct: 808 KNNID-VFYFSCLIPLNVLFVEDGKMERQVFLATWKDIPNENELQFQIKECHL-NADTVS 865
Query: 791 DLLAASNMFFIAKRKNANQDVFYFSAKIPPGVPFLIELTTVIGNPGVKCAIKTPNPDIAS 850
L +N++ IAKR QD+ Y S K+ G+ L EL GNP ++K P+++
Sbjct: 866 SKLQNNNVYTIAKRNVEGQDMLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVSQ 925
Query: 851 LFFEAIETLLK 861
++ +++LK
Sbjct: 926 YIYQVYDSILK 936
>sp|P63010|AP2B1_HUMAN AP-2 complex subunit beta OS=Homo sapiens GN=AP2B1 PE=1 SV=1
Length = 937
Score = 950 bits (2455), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/911 (55%), Positives = 636/911 (69%), Gaps = 65/911 (7%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVSSLF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVN+FVKD +DPNP
Sbjct: 41 MTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLC+PL++CLKD+DPYVRKTAA+CVAKL+DINA++VED+G
Sbjct: 101 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQG 160
Query: 121 FLESLKDLISDNNPMVVANAVAALAEIEENS-SRPIFEITSHTLSKLLTALNECTEWGQV 179
FL+SL+DLI+D+NPMVVANAVAAL+EI E+ + + ++ ++KLLTALNECTEWGQ+
Sbjct: 161 FLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQI 220
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELI-TSTDVVRNL 238
FILD LS Y D REA++I ERVTPRL HAN AVVLSAVK++++ +EL+ +D L
Sbjct: 221 FILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNML 280
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
KK+APPLVTLLS EPE+QYVALRNINLIVQ+RP IL EIKVFF KYNDPIYVK+EKL+
Sbjct: 281 LKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLD 340
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
IMI+LAS NI QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S LL+LI+
Sbjct: 341 IMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ 400
Query: 359 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 418
KVNYVVQEAI+VI+DIFR+YPN YESIIATLCE+LD+LDEP+A+A+MIWI+GEYAERID
Sbjct: 401 TKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERID 460
Query: 419 NADELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDL 478
NADELLESFLE F +E QVQL LLTA VKLFLKKP+E Q+++Q VL+ AT ++DNPDL
Sbjct: 461 NADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSET-QELVQQVLSLATQDSDNPDL 519
Query: 479 RDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPE 538
RDR YIYWRLLSTDP AK+VVL+EKP+IS++++ ++P+LLDEL+ +I +L+SVYHKPP
Sbjct: 520 RDRGYIYWRLLSTDPVTAKEVVLSEKPLISEETDLIEPTLLDELICHIGSLASVYHKPPN 579
Query: 539 AFV--------TRVKTTASRTDDEDYPNGSEQGYS-DAPTHVADEGAS------------ 577
AFV + TD D P G+ + + P + +G
Sbjct: 580 AFVEGSHGIHRKHLPIHHGSTDAGDSPVGTTTATNLEQPQVIPSQGDLLGDLLNLDLGPP 639
Query: 578 ---PQTSS-----------------------SNAPYAATRQPAPPPAAPVSPPVPDLLGD 611
PQ SS S+ P AT P+P PA V L D
Sbjct: 640 VNVPQVSSMQMGAVDLLGGGLDSLVGQSFIPSSVP--ATFAPSPTPAV-----VSSGLND 692
Query: 612 LIGLDNSAAIVPADQAAASPVPALPVVLPASTGQGLQIGAELTRQDGQVFYSMLFENNTQ 671
L L + P A V LPA +GL+I T + G ++ M F N
Sbjct: 693 LFELSTGIGMAPGGYVAPK-----AVWLPAVKAKGLEISGTFTHRQGHIYMEMNFTNKAL 747
Query: 672 TPLDGFMIQFNKNTFGLAAGGALQVPQ-LQPGTSGRTLLPMVLFQNMSAGPPSSLLQVAV 730
+ F IQFNKN+FG+ L + L P S LP+ + P + LQVAV
Sbjct: 748 QHMTDFAIQFNKNSFGVIPSTPLAIHTPLMPNQSIDVSLPLNTLGPVMKMEPLNNLQVAV 807
Query: 731 KNNQQPVWYFNDKISLHVLFTEDGRMERGSFLETWRSLPDSNEVLKDLPGVVVSNVEATL 790
KNN V+YF+ I L+VLF EDG+MER FL TW+ +P+ NE+ + + N +
Sbjct: 808 KNNID-VFYFSCLIPLNVLFVEDGKMERQVFLATWKDIPNENELQFQIKECHL-NADTVS 865
Query: 791 DLLAASNMFFIAKRKNANQDVFYFSAKIPPGVPFLIELTTVIGNPGVKCAIKTPNPDIAS 850
L +N++ IAKR QD+ Y S K+ G+ L EL GNP ++K P+++
Sbjct: 866 SKLQNNNVYTIAKRNVEGQDMLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVSQ 925
Query: 851 LFFEAIETLLK 861
++ +++LK
Sbjct: 926 YIYQVYDSILK 936
>sp|Q9DBG3|AP2B1_MOUSE AP-2 complex subunit beta OS=Mus musculus GN=Ap2b1 PE=1 SV=1
Length = 937
Score = 949 bits (2453), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/911 (55%), Positives = 636/911 (69%), Gaps = 65/911 (7%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVSSLF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVN+FVKD +DPNP
Sbjct: 41 MTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLC+PL++CLKD+DPYVRKTAA+CVAKL+DINA++VED+G
Sbjct: 101 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQG 160
Query: 121 FLESLKDLISDNNPMVVANAVAALAEIEENS-SRPIFEITSHTLSKLLTALNECTEWGQV 179
FL+SL+DLI+D+NPMVVANAVAAL+EI E+ + + ++ ++KLLTALNECTEWGQ+
Sbjct: 161 FLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQI 220
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELI-TSTDVVRNL 238
FILD LS Y D REA++I ERVTPRL HAN AVVLSAVK++++ +EL+ +D L
Sbjct: 221 FILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNML 280
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
KK+APPLVTLLS EPE+QYVALRNINLIVQ+RP IL EIKVFF KYNDPIYVK+EKL+
Sbjct: 281 LKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLD 340
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
IMI+LAS NI QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S LL+LI+
Sbjct: 341 IMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ 400
Query: 359 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 418
KVNYVVQEAI+VI+DIFR+YPN YESIIATLCE+LD+LDEP+A+A+MIWI+GEYAERID
Sbjct: 401 TKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERID 460
Query: 419 NADELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDL 478
NADELLESFLE F +E QVQL LLTA VKLFLKKP+E Q+++Q VL+ AT ++DNPDL
Sbjct: 461 NADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSET-QELVQQVLSLATQDSDNPDL 519
Query: 479 RDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPE 538
RDR YIYWRLLSTDP AK+VVL+EKP+IS++++ ++P+LLDEL+ +I +L+SVYHKPP
Sbjct: 520 RDRGYIYWRLLSTDPVTAKEVVLSEKPLISEETDLIEPTLLDELICHIGSLASVYHKPPN 579
Query: 539 AFV--------TRVKTTASRTDDEDYPNGSEQGYS-DAPTHVADEGAS------------ 577
AFV + TD D P G+ + + P + +G
Sbjct: 580 AFVEGSHGIHRKHLPIHHGSTDAGDSPVGTTTTTNLEQPQVIPSQGDLLGDLLNLDLGPP 639
Query: 578 ---PQTSS-----------------------SNAPYAATRQPAPPPAAPVSPPVPDLLGD 611
PQ SS S+ P AT P+P PA V L D
Sbjct: 640 VNVPQVSSMQMGAVDLLGGGLDSLVGQSFIPSSVP--ATFAPSPTPAV-----VSSGLND 692
Query: 612 LIGLDNSAAIVPADQAAASPVPALPVVLPASTGQGLQIGAELTRQDGQVFYSMLFENNTQ 671
L L + P A V LPA +GL+I T + G ++ M F N
Sbjct: 693 LFELSTGIGMAPGGYVAPK-----AVWLPAVKAKGLEISGTFTHRQGHIYMEMNFTNKAL 747
Query: 672 TPLDGFMIQFNKNTFGLAAGGALQVPQ-LQPGTSGRTLLPMVLFQNMSAGPPSSLLQVAV 730
+ F IQFNKN+FG+ L + L P S LP+ + P + LQVAV
Sbjct: 748 QHMTDFAIQFNKNSFGVIPSTPLAIHTPLMPNQSIDVSLPLNTLGPVMKMEPLNNLQVAV 807
Query: 731 KNNQQPVWYFNDKISLHVLFTEDGRMERGSFLETWRSLPDSNEVLKDLPGVVVSNVEATL 790
KNN V+YF+ I L+VLF EDG+MER FL TW+ +P+ NE+ + + N +
Sbjct: 808 KNNID-VFYFSCLIPLNVLFVEDGKMERQVFLATWKDIPNENELQFQIKECHL-NADTVS 865
Query: 791 DLLAASNMFFIAKRKNANQDVFYFSAKIPPGVPFLIELTTVIGNPGVKCAIKTPNPDIAS 850
L +N++ IAKR QD+ Y S K+ G+ L EL GNP ++K P+++
Sbjct: 866 SKLQNNNVYTIAKRNVEGQDMLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVSQ 925
Query: 851 LFFEAIETLLK 861
++ +++LK
Sbjct: 926 YIYQVYDSILK 936
>sp|Q08DS7|AP1B1_BOVIN AP-1 complex subunit beta-1 OS=Bos taurus GN=AP2B1 PE=2 SV=1
Length = 951
Score = 945 bits (2442), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/919 (54%), Positives = 631/919 (68%), Gaps = 67/919 (7%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVSSLF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVN+FVKD +DPNP
Sbjct: 41 MTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLC+PL++CLKD+DPYVRKTAA+CVAKL+DINA++VED+G
Sbjct: 101 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQG 160
Query: 121 FLESLKDLISDNNPMVVANAVAALAEIEENS-SRPIFEITSHTLSKLLTALNECTEWGQV 179
FL+SL+DLI+D+NPMVVANAVAAL+EI E+ + + ++ ++KLLTALNECTEWGQ+
Sbjct: 161 FLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQI 220
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELI-TSTDVVRNL 238
FILD LS Y D REA++I ERVTPRL HAN AVVLSAVK++++ +EL+ +D L
Sbjct: 221 FILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKESDYYNML 280
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
KK+APPLVTLLS EPE+QYVALRNINLIVQ+RP IL EIKVFF KYNDPIYVK+EKL+
Sbjct: 281 LKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLD 340
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
IMI+LAS NI QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S LL+LI+
Sbjct: 341 IMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ 400
Query: 359 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 418
KVNYVVQEAI+VI+DIFR+YPN YESIIATLCE+LD+LDEP+A+A+MIWI+GEYAERID
Sbjct: 401 TKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERID 460
Query: 419 NADELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDL 478
NADELLESFLE F +E QVQL LLTA VKLFLKKP+E Q+++Q VL+ AT ++DNPDL
Sbjct: 461 NADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSET-QELVQQVLSLATQDSDNPDL 519
Query: 479 RDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPE 538
RDR YIYWRLLSTDP AK+VVL+EKP+IS++++ ++P+LLDEL+ +I +L+SVYHKPP
Sbjct: 520 RDRGYIYWRLLSTDPVTAKEVVLSEKPLISEETDLIEPTLLDELICHIGSLASVYHKPPN 579
Query: 539 AFVTRVKTTASRTDDEDYPNGSEQGYSDAPTHVADEGASPQTSSS--------------- 583
AFV R + ++ G S T A PQ S
Sbjct: 580 AFVEG-SHGIHRKHLPIHHGSTDAGDSPVGTTTATNLEQPQVIPSQGDLLGDLLNLDLGP 638
Query: 584 --NAPYAATRQ----------------------------------PAPPPAAPVSPPVPD 607
N P ++ Q P+ PA P P
Sbjct: 639 PVNVPQVSSMQMGAVDLLGGGLDSLLGSDLGGGIGGSPAVGQSFIPSSVPATFAPSPTPA 698
Query: 608 L----LGDLIGLDNSAAIVPADQAAASPVPALPVVLPASTGQGLQIGAELTRQDGQVFYS 663
+ L DL L + P A V LPA +GL+I T + G ++
Sbjct: 699 VVSSGLNDLFELSTGIGMAPGGYVAPK-----AVWLPAVKAKGLEISGTFTHRQGHIYME 753
Query: 664 MLFENNTQTPLDGFMIQFNKNTFGLAAGGALQVPQ-LQPGTSGRTLLPMVLFQNMSAGPP 722
M F N + F IQFNKN+FG+ L + L P S LP+ + P
Sbjct: 754 MNFTNKALQHMTDFAIQFNKNSFGVIPSTPLAIHTPLMPNQSIDVSLPLNTLGPVMKMEP 813
Query: 723 SSLLQVAVKNNQQPVWYFNDKISLHVLFTEDGRMERGSFLETWRSLPDSNEVLKDLPGVV 782
+ LQVAVKNN V+YF+ I L+VLF EDG+MER FL TW+ +P+ NE+ +
Sbjct: 814 LNNLQVAVKNNID-VFYFSCLIPLNVLFVEDGKMERQVFLATWKDIPNENELQFQIKECH 872
Query: 783 VSNVEATLDLLAASNMFFIAKRKNANQDVFYFSAKIPPGVPFLIELTTVIGNPGVKCAIK 842
+ N + L +N++ IAKR QD+ Y S K+ G+ L EL GNP ++K
Sbjct: 873 L-NADTVSSKLQNNNVYTIAKRNVEGQDMLYQSLKLTNGIWILAELRIQPGNPNYTLSLK 931
Query: 843 TPNPDIASLFFEAIETLLK 861
P+++ ++ +++LK
Sbjct: 932 CRAPEVSQYIYQVYDSILK 950
>sp|Q54X82|AP1B_DICDI AP-1 complex subunit beta OS=Dictyostelium discoideum GN=ap1b1 PE=3
SV=1
Length = 942
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/550 (73%), Positives = 477/550 (86%), Gaps = 1/550 (0%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVS LFT V+NCMQT NLELKKLVYLY++NYAK+ PD AILAVNTF KD+ DPNP
Sbjct: 41 MTVGKDVSMLFTHVLNCMQTHNLELKKLVYLYVMNYAKNHPDRAILAVNTFQKDASDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVD ITE+LC+PL+ LKD DPYVRKTAA+CVAKLYD+N ELVE++G
Sbjct: 101 LIRALAVRTMGCIRVDNITEHLCEPLRHALKDQDPYVRKTAAVCVAKLYDVNPELVENQG 160
Query: 121 FLESLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVF 180
FL L DL+ D+NPMVVANAVA+L EI+E S + +F I S L+KLL ALNECTEWGQVF
Sbjct: 161 FLNILNDLLGDSNPMVVANAVASLTEIDEVSKKEVFRIHSGNLNKLLAALNECTEWGQVF 220
Query: 181 ILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCK 240
IL++L +Y D++EAEN+ ERV PRLQHAN AVVLSAVK++++ M I + DV+R CK
Sbjct: 221 ILNSLCKYTPRDSQEAENVCERVAPRLQHANSAVVLSAVKVLMKYMNSIGNNDVIRLFCK 280
Query: 241 KMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIM 300
KMAPPLVTLLS EPEIQ++ LRNINLIVQ+RP IL +E+KVFFCKYNDPIYVKMEKLEIM
Sbjct: 281 KMAPPLVTLLSKEPEIQFLGLRNINLIVQKRPEILQYEMKVFFCKYNDPIYVKMEKLEIM 340
Query: 301 IKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIK 360
I LA+++NI++VLLEFKEYATE+DV+FVRKAVRAIGRCAIK++RA+ERCI VLL+LI+ K
Sbjct: 341 IMLANEKNIEEVLLEFKEYATEIDVEFVRKAVRAIGRCAIKIDRASERCIQVLLDLIQTK 400
Query: 361 VNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNA 420
VNYVVQEAIIVIKDIFR+YPN YE IIATLC +L++LDEPEAKASMIWIIGEYAERIDNA
Sbjct: 401 VNYVVQEAIIVIKDIFRKYPNKYEGIIATLCANLESLDEPEAKASMIWIIGEYAERIDNA 460
Query: 421 DELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRD 480
ELL SFLE F +E +QVQLQLLT+ VKLFLK+P + QQM+Q VLN +T E+DNPDLRD
Sbjct: 461 HELLNSFLEGFKDENSQVQLQLLTSIVKLFLKRPKDA-QQMVQTVLNLSTQESDNPDLRD 519
Query: 481 RAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPEAF 540
R ++YWRLLSTD EAAK VVL+EKP+I+D ++ LD SLL+EL+ NI+TL+SVYHKPPE F
Sbjct: 520 RGFVYWRLLSTDFEAAKAVVLSEKPLITDTTSHLDESLLNELILNISTLASVYHKPPETF 579
Query: 541 VTRVKTTASR 550
VT++K R
Sbjct: 580 VTKLKGLNKR 589
Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 116/230 (50%), Gaps = 10/230 (4%)
Query: 637 VVLPASTGQGLQIGAELTRQDGQVFYSMLFENNTQTPLDGFMIQFNKNTFGLA-AGGALQ 695
VV Q +QI TR G++ + N +Q + F IQF +N+FG++ A L
Sbjct: 713 VVFGGDRSQAIQISGAFTRFQGRINLELNLLNTSQQGMSKFKIQFYQNSFGISPADQILS 772
Query: 696 VPQLQPGTSGRTLLPMVLFQNMSAGPPSSLLQVAVKN-NQQPVWYFNDKISLHVLFTEDG 754
++ G S +P+ +S P + ++ +A+ Q +YF L L TE G
Sbjct: 773 CGAIEVGQSTDVTIPISCNGQIS-NPLNPVIDMAMMVLPSQERFYFKMNFPLLCLLTETG 831
Query: 755 RMERGSFLETWRSLPDSNE----VLKDLPGVVVSNVEATLDLLAASNMFFIAKRKNANQD 810
R++R S+L W+S+P+SNE + LP V +V++ L L + N+F I ++K NQ+
Sbjct: 832 RLDRESYLSMWKSIPESNERSVEIQVRLPHV---DVDSILRRLNSKNIFEIVRKKAPNQE 888
Query: 811 VFYFSAKIPPGVPFLIELTTVIGNPGVKCAIKTPNPDIASLFFEAIETLL 860
+ + S K V LIEL I +C+ KT +PDI +LF + L+
Sbjct: 889 ISFLSCKTESSVYILIELAFNISTNTCRCSSKTTSPDIMALFEHNLNLLI 938
>sp|P52303|AP1B1_RAT AP-1 complex subunit beta-1 OS=Rattus norvegicus GN=Ap1b1 PE=1 SV=1
Length = 949
Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/543 (74%), Positives = 482/543 (88%), Gaps = 3/543 (0%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVS+LF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVNTFVKD +DPNP
Sbjct: 41 MTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLC+PL++CLKD+DPYVRKTAA+CVAKL+DINA+LVED+G
Sbjct: 101 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQG 160
Query: 121 FLESLKDLISDNNPMVVANAVAALAEI-EENSSRPIFEITSHTLSKLLTALNECTEWGQV 179
FL++LKDLISD+NPMVVAN VAAL+EI E + S + ++ + +++KLLTALNECTEW Q+
Sbjct: 161 FLDTLKDLISDSNPMVVANRVAALSEIAESHPSSNLLDLKAQSINKLLTALNECTEWAQI 220
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITST-DVVRNL 238
FILD L Y D REA++I ERVTPRL HAN AVVLSAVK++++ ME+++ D L
Sbjct: 221 FILDCLGNYMPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYATL 280
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
KK+APPLVTLLSAEPE QYV LRNINLIVQ+RP IL HE+KVFF KYNDPIYVK+EKL+
Sbjct: 281 LKKLAPPLVTLLSAEPEPQYVPLRNINLIVQKRPEILKHEMKVFFVKYNDPIYVKLEKLD 340
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
IMI+LAS NI QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S LL+LI+
Sbjct: 341 IMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ 400
Query: 359 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 418
KVNYVVQEAI+VIKDIFR+YPN YES+IATLCE+LD+LDEPEA+A+MIWI+GEYAERID
Sbjct: 401 TKVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERID 460
Query: 419 NADELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDL 478
NADELLESFL+ F +E QVQLQLLTA VKLFLKKPTE Q+++Q VL+ AT ++DNPDL
Sbjct: 461 NADELLESFLDGFHDESTQVQLQLLTAIVKLFLKKPTET-QELVQQVLSLATQDSDNPDL 519
Query: 479 RDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPE 538
RDR YIYWRLLSTDP AAK+VVLAEKP+IS++++ ++P+LLDEL+ I TL+SVYHKPP
Sbjct: 520 RDRGYIYWRLLSTDPVAAKEVVLAEKPLISEETDLIEPTLLDELICYIGTLASVYHKPPN 579
Query: 539 AFV 541
AFV
Sbjct: 580 AFV 582
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/262 (37%), Positives = 134/262 (51%), Gaps = 14/262 (5%)
Query: 604 PVPDLLGDLIGLDNSAAIVPADQAAASPVPALPVVLPASTGQGLQIGAELTRQDGQVFYS 663
PV L DL L + + + S V V LPA +GL+I TRQ G +
Sbjct: 697 PVSSGLSDLFDLTSGVGTL-----SGSYVAPKAVWLPAMKAKGLEISGTFTRQVGSISMD 751
Query: 664 MLFENNTQTPLDGFMIQFNKNTFGLAAGGALQVPQ-LQPGTSGRTLLPMVLFQNMSAGPP 722
+ N + F IQFN+N+FGLA LQV L P + LP+ ++ P
Sbjct: 752 LQLTNKALQVMTDFAIQFNRNSFGLAPAAPLQVHAPLSPNQTVEISLPLNTVGSVMKMEP 811
Query: 723 SSLLQVAVKNNQQPVWYFNDKISLHVLFTEDGRMERGSFLETWRSLPDSNEV---LKDLP 779
+ LQVAVKNN V+YF+ LHVLF EDG+M+R FL TW+ +P+ NE ++D P
Sbjct: 812 LNNLQVAVKNNID-VFYFSTLYPLHVLFVEDGKMDRQMFLATWKDIPNENEAQFQIRDCP 870
Query: 780 GVVVSNVEATLDLLAASNMFFIAKRKNANQDVFYFSAKIPPGVPFLIELTTVIGNPGVKC 839
N EA L +SN+F +AKR QD+ Y S K+ G+ L EL GNP
Sbjct: 871 ----LNTEAASSKLQSSNIFTVAKRTVEGQDMLYQSLKLTNGIWVLAELRIQPGNPSFTL 926
Query: 840 AIKTPNPDIASLFFEAIETLLK 861
++K P+++ +A ET+LK
Sbjct: 927 SLKCRAPEVSQHDIQAYETILK 948
>sp|O43079|AP1B1_SCHPO AP-1 complex subunit beta-1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=apl2 PE=1 SV=1
Length = 683
Score = 553 bits (1426), Expect = e-156, Method: Compositional matrix adjust.
Identities = 292/644 (45%), Positives = 419/644 (65%), Gaps = 40/644 (6%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVSSLF DV+ + T ++ LKKLVYLYLINYAK+ PDL ILAVNTFVKDS++ NP
Sbjct: 45 MTVGKDVSSLFPDVLKNLATRDITLKKLVYLYLINYAKTHPDLCILAVNTFVKDSEEYNP 104
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
+RALA+RTMGCIRV+KI YL DPL++ LKD+ PYVRK AA+CV K+YD++ E G
Sbjct: 105 TLRALAIRTMGCIRVNKIIGYLADPLRKALKDEHPYVRKAAAVCVVKMYDLDREYCASNG 164
Query: 121 FLESLKDLISDNNPMVVANAVAALAEI-EENSSRPIFEITSHTLSKLLTALNECTEWGQV 179
F+E L+ L+SD NP+VVANAV +LAEI +++ + F + +L+ AL+EC EWG++
Sbjct: 165 FIEQLQALVSDPNPVVVANAVRSLAEIHDQDPEKGYFNVVYTMTDRLMVALSECNEWGRI 224
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLC 239
IL++L+R++ +D +EAE + ERV P+ QHAN VVLSAVK+I+ + L +S D L
Sbjct: 225 TILNSLARFRTSDIKEAEYVCERVVPQFQHANSGVVLSAVKVIMVHIPLFSS-DFTDFLY 283
Query: 240 KKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEI 299
KKMAPPL+TLLS + EIQYVALRNINLI+Q+RP+I + +VFFCKYNDP+Y+KMEKL+I
Sbjct: 284 KKMAPPLLTLLSTDSEIQYVALRNINLILQKRPSIFDVKTRVFFCKYNDPLYIKMEKLKI 343
Query: 300 MIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKI 359
+ LA D NI++ + E + Y +EV+++FV++ ++ +G A+K+ CIS+ LE+ ++
Sbjct: 344 ITMLACDENINETISELRAYVSEVELEFVKQTIKCLGDVALKVPSVINDCISIFLEIYEL 403
Query: 360 KVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDN 419
++Y+VQE +V++ + R+YP + ++ L ++ L +P A++SM WI+GE++ I
Sbjct: 404 NISYMVQEVTVVMETVLRKYPQKIDLLLPYLSRVIEELGDPRARSSMAWILGEFSHVIPT 463
Query: 420 ADELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLR 479
+ +LL + + +E Q+QL LLTA VKL L ++++Q VLN A ++ N DLR
Sbjct: 464 SSKLLSEMISTMADEDLQIQLALLTAVVKLSLMNGKGNDEELVQKVLNYAINQSSNQDLR 523
Query: 480 DRAYIYWRLLS-TDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPE 538
DRA+ Y RLL+ + A+ +V EKP +S ++N L +LLD LL I TL+SVYHK PE
Sbjct: 524 DRAFAYQRLLTPENVRKAQKIVCCEKPSVSYNNN-LPEALLDALLCEITTLASVYHKLPE 582
Query: 539 AFVTRVKTTASRTD----------------------------DEDYPNGSEQGYSDAPTH 570
+F+ + K A D D+ + SD+P
Sbjct: 583 SFIGQGKFGADAIQRRAVEELNIEEANVHEAIEKGANVENLLDLDFTDPGATSASDSPI- 641
Query: 571 VADEGASPQTSSSNAP--YAATRQPAPPPAAPVS--PPVPDLLG 610
A PQ+ S++A + A P+ A PV DLLG
Sbjct: 642 ---TSAQPQSGSNSAMDLFMAFEAPSTNNAEPVKARSATDDLLG 682
>sp|O43005|AP2B_SCHPO AP-2 complex subunit beta OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=apl1 PE=3 SV=1
Length = 677
Score = 500 bits (1288), Expect = e-140, Method: Compositional matrix adjust.
Identities = 255/542 (47%), Positives = 366/542 (67%), Gaps = 2/542 (0%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
++ G D+SSLF V++ M++ NLELKKL YLYL YA +P A AV + D NP
Sbjct: 42 ISYGYDMSSLFPSVISSMESNNLELKKLCYLYLKIYASVKPTEAKRAVKLILNDIYSSNP 101
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
+IR+LA+RT+ + + DP+ R L D DPYVRKTAAI +AKLY + ++VE G
Sbjct: 102 MIRSLALRTLTSVNIKNFWVAAMDPIVRLLDDTDPYVRKTAAIGIAKLYSYDKKMVESSG 161
Query: 121 FLESLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVF 180
++ LK+++SD + +VVAN++AAL I +S+ + +KL+ +L +C+EW QV
Sbjct: 162 LIDHLKEMLSDESSVVVANSLAALMNIVNSSTGFKLTFSREISNKLVKSLTDCSEWLQVA 221
Query: 181 ILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCK 240
ILDAL Y EAE+ ER++P LQH N AV + AVK+IL + + V+
Sbjct: 222 ILDALIFYVPQKPGEAESFAERISPWLQHGNAAVCMGAVKVILYLTNYMKDDNRVKEYFM 281
Query: 241 KMAPPLVTLLSAEPE-IQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEI 299
K PPLVTLL+ + QYV LRNI +I+++ P + A++I F+C ++DPIYVK+EKL+I
Sbjct: 282 KTQPPLVTLLARKSSATQYVILRNIQIILEQCPEMFANDIHFFYCNFDDPIYVKLEKLDI 341
Query: 300 MIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKI 359
+ K+A N+DQ+L EF EYA+E+DV+ VRK+V+ IG AIK+E CI L+EL+
Sbjct: 342 LTKIADIHNLDQILPEFVEYASEIDVELVRKSVKCIGYLAIKIEERKNDCIDSLIELMNT 401
Query: 360 KVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDN 419
KV YV+QEA+IVI+DI R+YP +Y+S++ L E+LD+LDEP+AK+++IWI+G+YAE I++
Sbjct: 402 KVTYVIQEAVIVIRDILRKYPGSYKSLVPILYENLDSLDEPDAKSAVIWILGQYAEEIED 461
Query: 420 ADELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLR 479
+ LL +L+ F +EP ++QL LLTA +K+FLKKPT M+ VL T E ++PDLR
Sbjct: 462 SITLLNDYLKGFFDEPLEIQLTLLTAVIKVFLKKPT-AAADMVTNVLQWCTDEVNDPDLR 520
Query: 480 DRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPEA 539
DR IY R+LS +PE AK V+LA P ++ + DP ++L+ NI+TLSS+YHKPP
Sbjct: 521 DRGIIYSRMLSANPELAKKVILANMPPVNVGTGMYDPDTTEQLMLNISTLSSIYHKPPNR 580
Query: 540 FV 541
FV
Sbjct: 581 FV 582
>sp|P36000|AP1B1_YEAST AP-1 complex subunit beta-1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=APL2 PE=1 SV=1
Length = 726
Score = 417 bits (1071), Expect = e-115, Method: Compositional matrix adjust.
Identities = 228/556 (41%), Positives = 354/556 (63%), Gaps = 31/556 (5%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MT+GKDVSSLF DV+ + T ++E KKLVYLY++NYA++ P+L ILAVNTF+ D+QDPNP
Sbjct: 54 MTLGKDVSSLFPDVLKNIATIDVEQKKLVYLYVMNYAETHPELCILAVNTFITDAQDPNP 113
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIR +A+RTM IRVDKI EY+ PL+R L DD+ YVRKTA ICVAKL+ +N +L + G
Sbjct: 114 LIRCMAIRTMSMIRVDKILEYIETPLRRTLHDDNAYVRKTAVICVAKLFQLNKDLCVELG 173
Query: 121 FLESLKDLISDNNPMVVANAVAALAEIEENSSRPI---FEITSHTLSKLLTALNECTEWG 177
+E L + + D+NP+V+ANA AAL EI + I SH +S+ L ALNECTEW
Sbjct: 174 VVEDLVNALDDSNPLVIANATAALIEIHNMDMDAVDLSSLIQSH-VSQFLLALNECTEWA 232
Query: 178 QVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQ---QMELITSTDV 234
++ IL LS Y A D+ EA++I++RVT LQH N AVVL+ +K+I++ Q+E +++ +
Sbjct: 233 RIIILGTLSEYSAKDSLEAQDIIDRVTAHLQHVNPAVVLATIKVIVRNLPQIEYSSNSLI 292
Query: 235 VRNLCKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKM 294
+ K+++ V+L+S PE+QYVAL+NI +I+++ P +L E+++F+ K+NDP+YVK+
Sbjct: 293 M----KRLSSAFVSLMSTPPEMQYVALKNIRIILEKYPELLTKELRIFYVKFNDPLYVKL 348
Query: 295 EKLEIMIKLASDRNIDQ---VLLEFKEYATEVDVDFVRKAVRAIGRCAIKL--ERAAERC 349
EK++I+++L N+ Q +L E KEYA E + +FV +A++A+ + IK E +
Sbjct: 349 EKIDILVRLVDPSNLKQCTLLLTELKEYAMEYEPEFVSRAIQALSQLGIKYAQESFVSKV 408
Query: 350 ISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPE-------A 402
+ +LLEL++ + + + + I + D+ R P + + +C +T PE A
Sbjct: 409 LDILLELLE-RQDTIKDDCCISLCDLLRHCPGN-DKMAKQVCAVFNTWSNPEVLLQSDIA 466
Query: 403 KASMIWIIGEYAERIDNADELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMI 462
K + +W++G++ + + + F+E+F +E A Q+ LL V+L M+
Sbjct: 467 KCNYVWLLGQHPNNFSDLESKINIFIENFVQEEALTQMSLLMTIVRLH----ATLTGSML 522
Query: 463 QVVLNNATVETDNPDLRDRAYIYWRLLS--TDPEAAKDVVLAEKPVISDDSNQLDPSLLD 520
Q VL AT +T D+RD A +YWR LS + D+ + P+IS+ + P +L+
Sbjct: 523 QSVLELATQQTHELDVRDMAMMYWRCLSMPNNESLVNDLCQNKLPMISNTLEKFSPEVLE 582
Query: 521 ELLANIATLSSVYHKP 536
+LL + T+SS+Y KP
Sbjct: 583 KLLMELGTISSIYFKP 598
>sp|Q9LDK9|APBLA_ARATH Beta-adaptin-like protein A OS=Arabidopsis thaliana GN=BETAA-AD
PE=1 SV=1
Length = 841
Score = 345 bits (886), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 202/555 (36%), Positives = 327/555 (58%), Gaps = 17/555 (3%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MT+G DVSS+F ++V C T ++ LKK+ YLY+ NYAK PDL++L +N +D +D +P
Sbjct: 55 MTIGIDVSSVFGEMVMCSATSDIVLKKMCYLYVGNYAKGNPDLSLLTINFLQRDCKDEDP 114
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
+IR LA+R++ +RV + EYL PL LKD++ YVR A V KLY I+ D
Sbjct: 115 MIRGLALRSLCSLRVPNLVEYLVGPLGSGLKDNNSYVRTIAVTGVLKLYHISPSTCIDAD 174
Query: 121 FLESLKDL-ISDNNPMVVANAVAALAEI---EENSSRPIFEITSHTLSK-----LLTALN 171
F +LK L + D++ VVAN ++AL EI E + S LSK L +
Sbjct: 175 FPATLKSLMLHDSDAQVVANCLSALQEIWSLEASHSEEACREKESLLSKPVIYYFLNRIK 234
Query: 172 ECTEWGQVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITS 231
E EW Q IL+ +Y +D+ + +I+ + RLQHAN AVVL+ VK+ LQ ++
Sbjct: 235 EFNEWAQCLILELAVKYVPSDSNDIFDIMNLLEDRLQHANGAVVLATVKVFLQLT--LSM 292
Query: 232 TDVVRNLCKKMAPPLVTLLSA-EPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPI 290
TDV + + +++ PL+TL+S+ PE Y L +++L+V R P I A + K F+C+YN+P
Sbjct: 293 TDVHQQVYERIKSPLLTLVSSGSPEQSYAILSHLHLLVVRAPFIFAADYKHFYCQYNEPS 352
Query: 291 YVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCI 350
YVK KLE++ +A++ N +++ E EYA VD+ R+++RA+G+ A++ + +
Sbjct: 353 YVKKLKLEMLTAVANESNTYEIVTELCEYAANVDIAIARESIRAVGKIALQ-QYDVNAIV 411
Query: 351 SVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCE-SLDTLDEPEAKASMIWI 409
LL+ ++++ +YV E ++++KD+ R+YP I+ + S + EP+AKA++IW+
Sbjct: 412 DRLLQFLEMEKDYVTAETLVLVKDLLRKYPQWSHDCISVVGGISSKNIQEPKAKAALIWM 471
Query: 410 IGEYAERIDNADELLESFLESFPEE-PAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNN 468
+GEYA+ + +A +LE+ +E++ EE A+V+L LLTA +K F K+ E Q+ + L
Sbjct: 472 LGEYAQDMSDAPYVLENLIENWEEEHSAEVRLHLLTAAMKCFFKRAPE-TQKALGTAL-A 529
Query: 469 ATVETDNPDLRDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIAT 528
A + + D+ DRA Y+R+L D A+ VV K +S ++ + D + +
Sbjct: 530 AGIADFHQDVHDRALFYYRVLQYDVHVAERVVSPPKQAVSVFADTQSSEIKDRVFDEFNS 589
Query: 529 LSSVYHKPPEAFVTR 543
LS +Y KP F +
Sbjct: 590 LSVIYQKPSYMFTDK 604
>sp|Q9WV76|AP4B1_MOUSE AP-4 complex subunit beta-1 OS=Mus musculus GN=Ap4b1 PE=2 SV=2
Length = 738
Score = 277 bits (709), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 170/559 (30%), Positives = 299/559 (53%), Gaps = 33/559 (5%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MT G D+S +F ++V T ++ KKLVYLY+ YA +PDLA+LA+NT KD DPNP
Sbjct: 40 MTQGLDMSDVFMEMVKASATVDIVQKKLVYLYMGTYAPLKPDLALLAINTLCKDCSDPNP 99
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
++R LA+R+M +R+ + EY+ P+ L+D YVR+ A + AK+++++ + D
Sbjct: 100 MVRGLALRSMCSLRMPGVQEYIQQPVVNGLRDKASYVRRVAVLGCAKMHNLHGDSEVDGA 159
Query: 121 FLESLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVF 180
+ L L+ D +P+VV N + +L EI + + I LL +++ +WGQ
Sbjct: 160 LVNELYSLLRDQDPIVVVNCLRSLEEILKQEGGVV--INKPIAHHLLNRMSKLDQWGQAE 217
Query: 181 ILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVK--MILQQMELITSTDVVRNL 238
+L+ L RY+ E +I+ + L+ ++ VV+ A K +IL + TDV L
Sbjct: 218 VLNFLLRYQPRSEEELFDILNLLDSYLKSSSTGVVMGATKLFLILAKKFPHVQTDV---L 274
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
+ P L S E+ + AL ++ ++ P + K FFC Y++P Y+K++K+E
Sbjct: 275 VRVKGPLLAACSSESRELCFAALCHVRQVLHSLPGHFSSHYKKFFCSYSEPHYIKLQKVE 334
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
++ +L +D N+ QVL E + Y T+V DF + A+ AIG A + ++C+ +L EL+
Sbjct: 335 VLCELVNDENVQQVLEELRGYCTDVAADFAQAAIFAIGSIA---KTYTDQCVQILTELLG 391
Query: 359 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 418
++ ++ + +D+ P E++ L + + + E K ++IW++G + E+I
Sbjct: 392 LRQEHITTVVVQTFRDLVWLCPQCTEAVCQALPGCEENIQDSEGKQALIWLLGVHGEKIP 451
Query: 419 NADELLESFLESFPEE--PAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNP 476
NA +LE F+++ E PA V+++LLTA ++L L +P E Q M+ +L+ E +
Sbjct: 452 NAPYVLEDFVDNVKSETFPA-VKMELLTALMRLVLSRPAEC-QDMLGRLLHYCIEEEKDM 509
Query: 477 DLRDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSL----------LDELLANI 526
+RDR Y+RLL + K ++ + K DPSL ++ ++
Sbjct: 510 AVRDRGLFYYRLLLVGIDKVKQILCSPKS---------DPSLGLLEDQPERPVNSWASDF 560
Query: 527 ATLSSVYHKPPEAFVTRVK 545
TL+ VY + A +++ +
Sbjct: 561 NTLAPVYGRAHWATISKCQ 579
>sp|Q9Y6B7|AP4B1_HUMAN AP-4 complex subunit beta-1 OS=Homo sapiens GN=AP4B1 PE=1 SV=2
Length = 739
Score = 272 bits (695), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 182/562 (32%), Positives = 306/562 (54%), Gaps = 22/562 (3%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MT G D+S +F ++V T ++ KKLVYLY+ YA +PDLA+LA+NT KD DPNP
Sbjct: 40 MTQGLDMSGVFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALLAINTLCKDCSDPNP 99
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
++R LA+R+M +R+ + EY+ P+ L+D YVR+ A + AK+++++ + D
Sbjct: 100 MVRGLALRSMCSLRMPGVQEYIQQPILNGLRDKASYVRRVAVLGCAKMHNLHGDSEVDGA 159
Query: 121 FLESLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVF 180
+ L L+ D +P+VV N + +L EI + + I LL +++ +WGQ
Sbjct: 160 LVNELYSLLRDQDPIVVVNCLRSLEEILKQEGGVV--INKPIAHHLLNRMSKLDQWGQAE 217
Query: 181 ILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVK--MILQQMELITSTDVVRNL 238
+L+ L RY+ E +I+ + L+ ++ VV+ A K +IL +M TDV L
Sbjct: 218 VLNFLLRYQPRSEEELFDILNLLDSFLKSSSPGVVMGATKLFLILAKMFPHVQTDV---L 274
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
+ P L S E+ +VAL ++ I+ P + K FFC Y++P Y+K++K+E
Sbjct: 275 VRVKGPLLAACSSESRELCFVALCHVRQILHSLPGHFSSHYKKFFCSYSEPHYIKLQKVE 334
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
++ +L +D N+ QVL E + Y T+V DF + A+ AIG A ++C+ +L EL+
Sbjct: 335 VLCELVNDENVQQVLEELRGYCTDVSADFAQAAIFAIGGIA---RTYTDQCVQILTELLG 391
Query: 359 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 418
++ ++ + +D+ P E++ L + + + E K ++IW++G + ERI
Sbjct: 392 LRQEHITTVVVQTFRDLVWLCPQCTEAVCQALPGCEENIQDSEGKQALIWLLGVHGERIP 451
Query: 419 NADELLESFLESFPEE--PAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNP 476
NA +LE F+E+ E PA V+++LLTA ++LFL +P E Q M+ +L E +
Sbjct: 452 NAPYVLEDFVENVKSETFPA-VKMELLTALLRLFLSRPAEC-QDMLGRLLYYCIEEEKDM 509
Query: 477 DLRDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQL--DPSL--LDELLANIATLSSV 532
+RDR Y+RLL + K ++ + K SD + L DP+ ++ ++ TL V
Sbjct: 510 AVRDRGLFYYRLLLVGIDEVKRILCSPK---SDPTLGLLEDPAERPVNSWASDFNTLVPV 566
Query: 533 YHKPPEAFVTRVKTTASRTDDE 554
Y K A +++ + A R D E
Sbjct: 567 YGKAHWATISKCQ-GAERCDPE 587
>sp|P27351|AP2B_YEAST AP-2 complex subunit beta OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=APL1 PE=1 SV=2
Length = 700
Score = 266 bits (679), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 179/551 (32%), Positives = 310/551 (56%), Gaps = 26/551 (4%)
Query: 6 DVSSLFTDVVNCMQTEN-LELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRA 64
++S LF++++ Q E+ LE+K++ + Y+ +P A A+ + D + + ++
Sbjct: 52 EMSVLFSELLKFWQIEDDLEVKRICHEYIRVIGALKPQQAREALPFIMDDFKSRDEKLQI 111
Query: 65 LAVRTMGCIRVDKITEYLCDPLQRCLKDDDP--YVRKTAAICVAKLYDINAELVEDRGFL 122
+A+RT+ + V ++++ D + + P V +TA + L +I+ E V G
Sbjct: 112 MALRTLVLVPVKELSDQAFDCIISLVNHKSPPEQVTRTAIYALLDLDEIDHERV--LGLS 169
Query: 123 ESLKDLIS--DNNPMVVANAVAALAEI-EENSSRPIFEITSHTLSKLLTALNECTEWGQV 179
L D++ ++P V+ A+ L I E+N++ F I +L L E EW +
Sbjct: 170 SILHDIVKAQSSSPEVIVAALHTLYSIHEKNANMEPFRIPLELAFDMLELLPELNEWNKA 229
Query: 180 FILDALSRYKAADAR-EAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVR-N 237
+L+ L+ + ++E P LQ N VVL+++K I M L+ DV++
Sbjct: 230 TVLEVLTTSVVPQHYLDTHEMIELALPYLQQVNTYVVLNSLKFI---MYLLNYVDVIKET 286
Query: 238 LCKKMAPPLVTLLSAEPEIQYVALRN-INLIVQRRPTILAHEIKVFFCKYNDPIYVKMEK 296
L +K++ ++ LL PE+Q++ LRN I L++ R ++L +I FF +YNDPIY+K K
Sbjct: 287 LAEKLSNSVIALLDKPPELQFLVLRNVILLLLSRESSLLRLDISYFFIEYNDPIYIKDTK 346
Query: 297 LEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKL-ERAAERCISVLLE 355
LE + LA+ + ++L E ++YAT++D+ RK+VRAIG A+KL E + C++VLL+
Sbjct: 347 LECLYLLANKETLPRILEELEQYATDIDIQMSRKSVRAIGNLAVKLDEDSVHDCVAVLLD 406
Query: 356 LIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAE 415
L++ V+YVVQE I V ++I R+YPN +++ + L + + + EPE+K +MIWII +Y++
Sbjct: 407 LLEFGVDYVVQEIISVFRNILRKYPNNFKANVTELVKHTEVVQEPESKNAMIWIITQYSD 466
Query: 416 RIDNADELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDN 475
I N EL F + E +VQ +L + +K F++ PT+ +++ +L +N
Sbjct: 467 VIPNYLELFRVFSSNMFSETLEVQFSILNSAIKFFIRSPTKETEELCMDLLKGCIDHENN 526
Query: 476 PDLRDRAYIYWRLLSTDP----------EAAKDVVLAEKPVISDDSNQLDPSLLDELLAN 525
PDLRD+ +YWRLLS E+ K V+ E P+I ++ +LDP++L+EL N
Sbjct: 527 PDLRDKTLMYWRLLSLTKTSRISNAITFESLKSVLDGELPLIEMNT-KLDPTVLEELELN 585
Query: 526 IATLSSVYHKP 536
I T+ S+Y KP
Sbjct: 586 IGTIVSIYLKP 596
>sp|Q54R84|AP4B_DICDI AP-4 complex subunit beta OS=Dictyostelium discoideum GN=ap4b1 PE=3
SV=1
Length = 838
Score = 262 bits (669), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 174/586 (29%), Positives = 304/586 (51%), Gaps = 52/586 (8%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MT+G DVS LF DV+ + ++ +KKLVYLY+++Y+KS PDL +L VNT +D D NP
Sbjct: 54 MTIGMDVSVLFPDVIMVASSNDIIIKKLVYLYIVHYSKSNPDLLLLVVNTLRRDCIDRNP 113
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
+IR LA+R++ + EY + R L D YVRKTA + +AKLY ++ E +
Sbjct: 114 IIRGLALRSLCSLDSKNTLEYATIEINRSLTDFSGYVRKTALLGLAKLYHLSKEAFDLDI 173
Query: 121 FLESLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVF 180
+ + D+I D +P V+ NAV+ L EI +P + T + L+ E EW Q
Sbjct: 174 IIPKIFDMIMDQDPQVIVNAVSTLNEI-----KPGWSFTFDLVQHLMIKFKEFNEWSQCI 228
Query: 181 ILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCK 240
IL+ LSRY + E+ +I+ + RL H+N A+ LS +K+ L+ + ++ + +
Sbjct: 229 ILECLSRYTPSSEDESLDILNLLDDRLSHSNSALTLSTIKIFLKYTD--EFEEIQEQVYE 286
Query: 241 KMAPPLVTLL--SAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
++ PL+TL+ S E + L +I+L++ R P + K F+CK++DP+Y+K K++
Sbjct: 287 RIKEPLITLMESSESNETSFTILHHIHLLMSRSPRLFNRYYKHFYCKFDDPLYIKTLKVQ 346
Query: 299 IMIKLASDR----NIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERC---IS 351
++ ++AS++ +ID++L E EY E D ++++ AI A K + E+ S
Sbjct: 347 VLKEIASNQTFIESIDEILQELSEYVYEGDHSLCKQSINAITVIAQKHKNTQEKYPIDES 406
Query: 352 VLLELI----------------KIKVNYVVQEAIIV-IKDIFRRYPNTYESIIATLCESL 394
VL ++ I +N + I++ +KD R +P ++++ + E+L
Sbjct: 407 VLEKIFLPYLSVSSNLGGAGDDNISINEGILSFILISLKDFLRVFPKHLKTVLPYINENL 466
Query: 395 DTLDE-------PEAKASMIWIIGEYAERIDNADELLESFL-ESFPEEPAQVQLQLLTAT 446
+ P A S++W++GE N+ ++E F E F ++P V+ QLLT +
Sbjct: 467 IGIGSVSNYTLPPSANESVLWMLGESPNSQVNSPYIIEEFFNEKFDQQPTFVKTQLLTTS 526
Query: 447 VKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWR-LLSTDPEAAKDVVLAEKP 505
+K+F +P E + +++ + + +P L + + Y R +L D + A ++ + K
Sbjct: 527 LKVFFDRPGEMLPILKRILKKCCSDLSQDPGLHEISLFYSRIILLLDIDKAASIINSSKQ 586
Query: 506 VIS------DDSNQLDPSLLDELLANIATLSSVYHKPPEAFVTRVK 545
S D+ N+ + DE TLS ++ K F+ K
Sbjct: 587 TTSINTFLEDEINEYRDKIFDEF----NTLSVLFGKHSTKFIKNKK 628
>sp|Q9JME5|AP3B2_MOUSE AP-3 complex subunit beta-2 OS=Mus musculus GN=Ap3b2 PE=1 SV=2
Length = 1082
Score = 252 bits (644), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 172/557 (30%), Positives = 279/557 (50%), Gaps = 71/557 (12%)
Query: 4 GKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIR 63
GK+ S LF VV + +N+E+KKLVY+YL+ YA+ Q DLA+L+++TF + +DPN LIR
Sbjct: 68 GKNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLKDPNQLIR 127
Query: 64 ALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLE 123
A A+R + IRV I + ++ D PYVRKTAA + KLY ++++ + +E
Sbjct: 128 ASALRVLSSIRVPIIVPIMMLAIKEAASDMSPYVRKTAAHAIPKLYSLDSD--QKDQLIE 185
Query: 124 SLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVFILD 183
++ L++D +V + V A E+ ++ KL L + EWGQV I+
Sbjct: 186 VIEKLLADKTTLVAGSVVMAFEEVCPER----IDLIHKNYRKLCNLLIDVEEWGQVVIIS 241
Query: 184 ALSRY-------------------------------KAADAREAEN-------------- 198
L+RY K + EA
Sbjct: 242 MLTRYARTQFLSPTQNESLLEENPEKAFYGSEEDEAKGPGSEEAATAALPARKPYVMDPD 301
Query: 199 ---IVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPE 255
++ P LQ + AVV++ ++ L +V +A LV LL + E
Sbjct: 302 HRLLLRNTKPLLQSRSAAVVMAVAQLYFH---LAPKAEV-----GVIAKALVRLLRSHSE 353
Query: 256 IQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLE 315
+QYV L+N+ + +R + +K F+ + DP +K+ KLE++ LA++ NI VL E
Sbjct: 354 VQYVVLQNVATMSIKRRGMFEPYLKSFYIRSTDPTQIKILKLEVLTNLANETNIPTVLRE 413
Query: 316 FKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDI 375
F+ Y +D DFV ++AIGRCA + R + C++ L++L+ + VV E+++VIK +
Sbjct: 414 FQTYIRSMDKDFVAATIQAIGRCATNIGRVRDTCLNGLVQLLSNRDELVVAESVVVIKKL 473
Query: 376 FRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDN-ADELLESFLESFPEE 434
+ P + II L + D + P A+AS++W+IGEY E + A ++L +SF E
Sbjct: 474 LQMQPAQHGEIIKHLAKLTDNIQVPMARASILWLIGEYCEHVPKIAPDVLRKMAKSFTAE 533
Query: 435 PAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPE 494
V+LQ++ KL+L ++ + + Q VL+ A + N D+RDRA +L+ +
Sbjct: 534 EDIVKLQVINLAAKLYLTN-SKQTKLLTQYVLSLAKYD-QNYDIRDRARFTRQLIVPSEQ 591
Query: 495 A------AKDVVLAEKP 505
AK + LA KP
Sbjct: 592 GGALSRHAKKLFLAPKP 608
Score = 33.5 bits (75), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 11/110 (10%)
Query: 608 LLGDLIGLD-NSAAIVPADQAAASPVPALPV--VLPASTGQGLQIGAELTRQD-----GQ 659
L DL GL +++VP+ SPV ++ +L G+GL + +RQ
Sbjct: 832 LAADLEGLTLTDSSLVPS---LLSPVSSIGRQELLHRVAGEGLSVDYAFSRQPFSGDPHM 888
Query: 660 VFYSMLFENNTQTPLDGFMIQFNKNTFGLAAGGALQVPQLQPGTSGRTLL 709
V + F NN++TP+ G + K G++ ++ L PG S T++
Sbjct: 889 VSLHIYFSNNSETPIKGLHVGTPKLPAGISIQEFPEIESLAPGESTTTVM 938
>sp|Q13367|AP3B2_HUMAN AP-3 complex subunit beta-2 OS=Homo sapiens GN=AP3B2 PE=1 SV=2
Length = 1082
Score = 251 bits (642), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 172/557 (30%), Positives = 279/557 (50%), Gaps = 71/557 (12%)
Query: 4 GKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIR 63
GK+ S LF VV + +N+E+KKLVY+YL+ YA+ Q DLA+L+++TF + +DPN LIR
Sbjct: 68 GKNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLKDPNQLIR 127
Query: 64 ALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLE 123
A A+R + IRV I + ++ D PYVRKTAA + KLY ++++ + +E
Sbjct: 128 ASALRVLSSIRVPIIVPIMMLAIKEAASDMSPYVRKTAAHAIPKLYSLDSD--QKDQLIE 185
Query: 124 SLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVFILD 183
++ L++D +V + V A E+ ++ KL L + EWGQV I+
Sbjct: 186 VIEKLLADKTTLVAGSVVMAFEEVCPER----IDLIHKNYRKLCNLLIDVEEWGQVVIIS 241
Query: 184 ALSRY-------------------------------KAADAREAEN-------------- 198
L+RY K A + E
Sbjct: 242 MLTRYARTQFLSPTQNESLLEENAEKAFYGSEEDEAKGAGSEETAAAAAPSRKPYVMDPD 301
Query: 199 ---IVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPE 255
++ P LQ + AVV++ ++ L +V +A LV LL + E
Sbjct: 302 HRLLLRNTKPLLQSRSAAVVMAVAQLYFH---LAPKAEV-----GVIAKALVRLLRSHSE 353
Query: 256 IQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLE 315
+QYV L+N+ + +R + +K F+ + DP +K+ KLE++ LA++ NI VL E
Sbjct: 354 VQYVVLQNVATMSIKRRGMFEPYLKSFYIRSTDPTQIKILKLEVLTNLANETNIPTVLRE 413
Query: 316 FKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDI 375
F+ Y +D DFV ++AIGRCA + R + C++ L++L+ + VV E+++VIK +
Sbjct: 414 FQTYIRSMDKDFVAATIQAIGRCATNIGRVRDTCLNGLVQLLSNRDELVVAESVVVIKKL 473
Query: 376 FRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDN-ADELLESFLESFPEE 434
+ P + II L + D + P A+AS++W+IGEY E + A ++L +SF E
Sbjct: 474 LQMQPAQHGEIIKHLAKLTDNIQVPMARASILWLIGEYCEHVPRIAPDVLRKMAKSFTAE 533
Query: 435 PAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPE 494
V+LQ++ KL+L ++ + + Q VL+ A + N D+RDRA +L+ +
Sbjct: 534 EDIVKLQVINLAAKLYLTN-SKQTKLLTQYVLSLAKYD-QNYDIRDRARFTRQLIVPSEQ 591
Query: 495 A------AKDVVLAEKP 505
AK + LA KP
Sbjct: 592 GGALSRHAKKLFLAPKP 608
>sp|Q7YRF1|AP3B1_CANFA AP-3 complex subunit beta-1 OS=Canis familiaris GN=AP3B1 PE=2 SV=1
Length = 1091
Score = 249 bits (636), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 169/547 (30%), Positives = 277/547 (50%), Gaps = 61/547 (11%)
Query: 4 GKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIR 63
GK+ S LF VV + ++N+E+KKLVY+YL+ YA+ Q DLA+L+++TF + +DPN LIR
Sbjct: 73 GKNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIR 132
Query: 64 ALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLE 123
A A+R + IRV I + ++ D PYVRK AA + KLY ++ E + +E
Sbjct: 133 ASALRVLSSIRVPIIVPIMMLAIKEASADLSPYVRKNAAHAIQKLYSLDPE--QKEMLIE 190
Query: 124 SLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVFILD 183
++ L+ D + +V + V A E+ + ++ KL L + EWGQV I+
Sbjct: 191 VIEKLLKDKSTLVAGSVVMAFEEVCPDR----IDLIHKNYRKLCNLLVDVEEWGQVVIIH 246
Query: 184 ALSRYK----------------------AADAREAEN----------------IVERVTP 205
L+RY +D + E ++ P
Sbjct: 247 MLTRYARTQFVSPWKEDDGLEDNEKNFYESDDEQKEKTDQKKKPYAMDPDHRLLIRNTKP 306
Query: 206 RLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQYVALRNIN 265
LQ N AVV++ ++ I+ V + K LV LL + E+QY+ L+NI
Sbjct: 307 LLQSRNAAVVMAVAQLYWH----ISPKSEVGIISKS----LVRLLRSNREVQYIVLQNIA 358
Query: 266 LIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDV 325
+ +R +L +K F+ + DP +K+ KLEI+ LA++ NI +L EF+ Y D
Sbjct: 359 TMSIQRKGMLEPYLKSFYVRSTDPTMIKILKLEILTNLANEANISTLLREFQTYVKSQDK 418
Query: 326 DFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYES 385
F ++ IGRCA + + C+S L+ L+ + VV E+++VIK + + P +
Sbjct: 419 QFAAATIQTIGRCATSISEVTDTCLSGLVCLLSNRDEIVVAESVVVIKKLLQMQPAQHGE 478
Query: 386 IIATLCESLDTLDEPEAKASMIWIIGEYAERIDN-ADELLESFLESFPEEPAQVQLQLLT 444
II + + LD++ P A+AS++W+IGE ER+ A ++L +SF E V+LQ+L
Sbjct: 479 IIKHMAKLLDSITVPVARASILWLIGENCERVPKIAPDVLRKMAKSFTNEDDLVKLQILN 538
Query: 445 ATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEA------AKD 498
KL+L ++ + + Q +LN + N D+RDR +L+ + ++ AK
Sbjct: 539 LGAKLYLTN-SKQTKLLTQYILNLGKYD-QNYDIRDRTRFIRQLIVPNEKSGALSKYAKK 596
Query: 499 VVLAEKP 505
+ LA+KP
Sbjct: 597 IFLAQKP 603
>sp|O00203|AP3B1_HUMAN AP-3 complex subunit beta-1 OS=Homo sapiens GN=AP3B1 PE=1 SV=3
Length = 1094
Score = 245 bits (626), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 167/547 (30%), Positives = 274/547 (50%), Gaps = 61/547 (11%)
Query: 4 GKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIR 63
GK+ S LF VV + ++N+E+KKLVY+YL+ YA+ Q DLA+L+++TF + +DPN LIR
Sbjct: 73 GKNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIR 132
Query: 64 ALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLE 123
A A+R + IRV I + ++ D PYVRK AA + KLY ++ E + +E
Sbjct: 133 ASALRVLSSIRVPIIVPIMMLAIKEASADLSPYVRKNAAHAIQKLYSLDPE--QKEMLIE 190
Query: 124 SLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVFILD 183
++ L+ D + +V + V A E+ + ++ KL L + EWGQV I+
Sbjct: 191 VIEKLLKDKSTLVAGSVVMAFEEVCPDR----IDLIHKNYRKLCNLLVDVEEWGQVVIIH 246
Query: 184 ALSRY---------KAADAREAEN-----------------------------IVERVTP 205
L+RY K D E ++ P
Sbjct: 247 MLTRYARTQFVSPWKEGDELEDNGKNFYESDDDQKEKTDKKKKPYTMDPDHRLLIRNTKP 306
Query: 206 RLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQYVALRNIN 265
LQ N AVV+ AV + + + ++ + LV LL + E+QY+ L+NI
Sbjct: 307 LLQSRNAAVVM-AVAQLYWHISPKSEAGII-------SKSLVRLLRSNREVQYIVLQNIA 358
Query: 266 LIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDV 325
+ +R + +K F+ + DP +K KLEI+ LA++ NI +L EF+ Y D
Sbjct: 359 TMSIQRKGMFEPYLKSFYVRSTDPTMIKTLKLEILTNLANEANISTLLREFQTYVKSQDK 418
Query: 326 DFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYES 385
F ++ IGRCA + + C++ L+ L+ + VV E+++VIK + + P +
Sbjct: 419 QFAAATIQTIGRCATNILEVTDTCLNGLVCLLSNRDEIVVAESVVVIKKLLQMQPAQHGE 478
Query: 386 IIATLCESLDTLDEPEAKASMIWIIGEYAERIDN-ADELLESFLESFPEEPAQVQLQLLT 444
II + + LD++ P A+AS++W+IGE ER+ A ++L +SF E V+LQ+L
Sbjct: 479 IIKHMAKLLDSITVPVARASILWLIGENCERVPKIAPDVLRKMAKSFTSEDDLVKLQILN 538
Query: 445 ATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEA------AKD 498
KL+L ++ + + Q +LN + N D+RDR +L+ + ++ AK
Sbjct: 539 LGAKLYLTN-SKQTKLLTQYILNLGKYD-QNYDIRDRTRFIRQLIVPNVKSGALSKYAKK 596
Query: 499 VVLAEKP 505
+ LA+KP
Sbjct: 597 IFLAQKP 603
>sp|Q32PG1|AP3B1_BOVIN AP-3 complex subunit beta-1 OS=Bos taurus GN=AP3B1 PE=2 SV=1
Length = 1084
Score = 244 bits (622), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 166/547 (30%), Positives = 277/547 (50%), Gaps = 61/547 (11%)
Query: 4 GKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIR 63
GK+ S LF VV + ++N+E+KKLVY+YL+ YA+ Q DLA+L+++TF + +DPN LIR
Sbjct: 73 GKNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIR 132
Query: 64 ALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLE 123
A A+R + IRV I + ++ D PYVRK AA + KLY ++ E + +E
Sbjct: 133 ASALRVLSSIRVPIIVPIMMLAIKEASADLSPYVRKNAAHAIQKLYSLDPE--QKEMLIE 190
Query: 124 SLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVFILD 183
++ L+ D + +V + V A E+ + ++ KL L + EWGQV I+
Sbjct: 191 IIEKLLKDKSTLVAGSVVMAFEEVCPDR----IDLIHKNYRKLCNLLVDVEEWGQVVIIH 246
Query: 184 ALSRY------------------------------KAADAR--------EAENIVERVTP 205
L+RY + AD R + ++ P
Sbjct: 247 MLTRYARTQFVSPWRQGDVLEDNEKDFYDSDEEQKEKADKRKRPYAMDPDHRLLIRNTKP 306
Query: 206 RLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQYVALRNIN 265
LQ N AVV+ AV + + + ++ + LV LL + E+QY+ L+NI
Sbjct: 307 LLQSRNAAVVM-AVAQLYWHIAPKSEAGII-------SKSLVRLLRSSREVQYIVLQNIA 358
Query: 266 LIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDV 325
+ +R + +K F+ + D +K+ KLEI+ LA++ NI +L EF+ Y D
Sbjct: 359 TMSIQRKGMFEPYLKSFYVRSTDATMIKILKLEILTNLANEANISTLLREFQTYVKSQDK 418
Query: 326 DFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYES 385
F ++ IGRCA + ++ C++ L+ L+ + VV E+++VIK + + P +
Sbjct: 419 QFAAATIQTIGRCATSITEVSDTCLNGLVCLLSNRDEIVVAESVVVIKKLLQMQPMQHGE 478
Query: 386 IIATLCESLDTLDEPEAKASMIWIIGEYAERIDN-ADELLESFLESFPEEPAQVQLQLLT 444
II + + LD++ P A+AS++W+IGE ER+ A ++L +SF E V+LQ+L
Sbjct: 479 IIKHMAKLLDSITVPVARASILWLIGENCERVPKIAPDVLRKTAKSFTSEDDLVKLQILN 538
Query: 445 ATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEA------AKD 498
KL+L ++ + + Q +LN + N D+RDR +L+ + ++ AK
Sbjct: 539 LGAKLYLTN-SKQTKLLTQYILNLGKYD-QNYDIRDRTRFIRQLIVPNEKSGALSKYAKK 596
Query: 499 VVLAEKP 505
+ LA+KP
Sbjct: 597 IFLAQKP 603
>sp|Q9Z1T1|AP3B1_MOUSE AP-3 complex subunit beta-1 OS=Mus musculus GN=Ap3b1 PE=1 SV=2
Length = 1105
Score = 244 bits (622), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 167/548 (30%), Positives = 272/548 (49%), Gaps = 62/548 (11%)
Query: 4 GKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIR 63
GK+ S LF VV + ++N+E+KKLVY+YL+ YA+ Q DLA+L+++TF + +DPN LIR
Sbjct: 73 GKNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIR 132
Query: 64 ALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLE 123
A A+R + IRV I + ++ D PYVRK AA + KLY ++ E + +E
Sbjct: 133 ASALRVLSSIRVPIIVPVMMLAIKEASADLSPYVRKNAAHAIQKLYSLDPE--QKEMLIE 190
Query: 124 SLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVFILD 183
++ L+ D + +V + V A E+ + ++ KL L + EWGQV I+
Sbjct: 191 VIEKLLKDKSTLVAGSVVMAFEEVCPDR----IDLIHRNYRKLCNLLVDVEEWGQVVIIH 246
Query: 184 ALSRYKAA--------DAREAEN-------------------------------IVERVT 204
L+RY D +N ++
Sbjct: 247 MLTRYARTQFVSPWREDGGLEDNEKNFYESEEEEEEKEKSSRKKSYAMDPDHRLLIRNTK 306
Query: 205 PRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQYVALRNI 264
P LQ N AVV+ AV + + + V+ + LV LL + E+QY+ L+NI
Sbjct: 307 PLLQSRNAAVVM-AVAQLYWHISPKSEAGVI-------SKSLVRLLRSNREVQYIVLQNI 358
Query: 265 NLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVD 324
+ R + +K F+ + DP +K KLEI+ LA++ NI +L EF+ Y D
Sbjct: 359 ATMSIERKGMFEPYLKSFYVRSTDPTMIKTLKLEILTNLANEANISTLLREFQTYVRSQD 418
Query: 325 VDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYE 384
F ++ IGRCA + + C++ L+ L+ + VV E+++VIK + + P +
Sbjct: 419 KQFAAATIQTIGRCATSISEVTDTCLNGLVCLLSNRDEIVVAESVVVIKKLLQMQPAQHG 478
Query: 385 SIIATLCESLDTLDEPEAKASMIWIIGEYAERIDN-ADELLESFLESFPEEPAQVQLQLL 443
II + + LD++ P A+AS++W+IGE ER+ A ++L +SF E V+LQ+L
Sbjct: 479 EIIRHMAKLLDSITVPVARASILWLIGENCERVPKIAPDVLRKMAKSFTSEDDLVKLQIL 538
Query: 444 TATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEA------AK 497
KL+L ++ + + Q +LN + N D+RDR +L+ + ++ AK
Sbjct: 539 NLAAKLYLTN-SKQTKLLTQYILNLGKYD-QNYDIRDRTRFIRQLIVPNEKSGALSKYAK 596
Query: 498 DVVLAEKP 505
+ LA KP
Sbjct: 597 KIFLAPKP 604
>sp|O13939|AP3B_SCHPO AP-3 complex subunit beta OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=apl6 PE=1 SV=1
Length = 745
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 156/527 (29%), Positives = 259/527 (49%), Gaps = 40/527 (7%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
M G+++S F DVV + +EN E+++LV++YL+ YA+ PDLA+L+VNT K D NP
Sbjct: 61 MMHGENMSLYFPDVVKLVASENPEIRRLVHIYLLQYAEFNPDLALLSVNTVQKTLYDKNP 120
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
L R+ A+R M IRV I + +Q+C+ D VR++AA+ + K Y ++
Sbjct: 121 LTRSTAIRVMSSIRVPAINGIVLLAIQQCITDTADRVRQSAALAITKCYSLDPSY--KSQ 178
Query: 121 FLESLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVF 180
E +K L+SDN+P+VV AAL E + EI ++ T + +W +V
Sbjct: 179 LEEHIKTLLSDNSPIVVP---AALFTFEVVCPEKL-EIIHPYYHRICTLFPQMNDWDKVV 234
Query: 181 ILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVV----- 235
L L RY AR + E TP H++ +L ++K L+ ST +
Sbjct: 235 ALKTLVRY----ARLT--LPEPSTPS-THSDLKELLESIKSCF--FSLLPSTIIAGARAF 285
Query: 236 -----RNLCKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPI 290
N + PL+ LL +P ++ LR I+ IV + P + + IK FF +D
Sbjct: 286 YYLAPSNQMHLIVEPLLQLLLEKPIVRTTTLRYISQIVYKTPELFKNHIKSFFLIASDSD 345
Query: 291 YVKMEKLEIMIKLASDRNIDQVLLEFKEYA-TEVDVDFVRKAVRAIGRCAIKLERAAERC 349
+ K+ I+ +L +N Q+L E Y + + AV+A+G A A C
Sbjct: 346 DTCLLKINILSRLLDAQNSSQILPELLYYINSHPNPSVASTAVKALGDFASANISMAPSC 405
Query: 350 ISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWI 409
++ LL L+K + +V EA ++ + P E + L + +TL+ P AK+ +W+
Sbjct: 406 LNTLLLLLKSHNSLIVTEAASSLRLLIHNDPK--EIYLQYLAATYETLEVPRAKSVTLWL 463
Query: 410 IGEYAERIDN-ADELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQ-------M 461
I E+ I ++L +++F +E +V+ Q+L +V+L++ +E Q +
Sbjct: 464 ISEHILIIPRLVPDVLRIAVKTFADETLEVKYQILELSVRLYVLSHSEEKQNDLESRDDV 523
Query: 462 IQVVLNN--ATVETD-NPDLRDRAYIYWRLLST-DPEAAKDVVLAEK 504
+ ++ N + + D + DLRDRA Y L ST E + +VL K
Sbjct: 524 VSLLFNYVLSLIHFDMSYDLRDRARFYKELASTPSSEFTRRIVLESK 570
>sp|Q556J8|AP3B_DICDI AP-3 complex subunit beta OS=Dictyostelium discoideum GN=ap3b-1
PE=3 SV=1
Length = 1108
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 167/355 (47%), Gaps = 68/355 (19%)
Query: 240 KKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEI 299
+K+ LV +L + PE+QY+ L NI+ +V RP++ + FF +DP Y KLEI
Sbjct: 330 QKVGKSLVRILRSGPEVQYITLTNISTMVTLRPSMFEPHLSEFFIHSSDPEYSIKLKLEI 389
Query: 300 MIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKI 359
+ +LA+ NI ++L EFKEY D FV ++AIG CA + E CI L+ L+
Sbjct: 390 LTRLATPENIGKILKEFKEYVKNEDKKFVAATIQAIGSCASTVPDVTESCIYGLMSLLSN 449
Query: 360 KVNYVVQEAIIVIKDIFR-----------------------------RYPNT-----YES 385
+ VV E++IV+K + + ++ ++ Y++
Sbjct: 450 QSTVVVAESVIVLKRLLQLNATNEKLEKLEKEKEKEKDVKENQSTISKHSSSNNSIKYDN 509
Query: 386 IIATLCESLDTLDEPEAKASMIWIIGEYAERID-NADELLESFLESFPEEPAQVQLQLLT 444
II L + LDTL P A+AS++W+IGEY R+ A ++ ++SF +E V+L+ L
Sbjct: 510 IILHLSKLLDTLQVPSARASIVWVIGEYCYRVPLVAPDVFRKLVKSFSDEHESVKLETLN 569
Query: 445 ATVKLFLK---------------------KPTEGPQQMIQVVLNNATVETDNPDLRDRA- 482
KL+++ + E M Q VLN A + N D+RD +
Sbjct: 570 LGSKLYVQFTDNNSTTTTDNSIPNEFKNERTKEKITLMFQYVLNLAKFDQ-NYDIRDNSR 628
Query: 483 ---YIYWRLLSTDP--EAAKDVVLAEKPV-----ISDDSNQLDPSLLDELLANIA 527
+ Y+ +T K +V+ +KP+ IS+D + L ++ + A
Sbjct: 629 MLKHFYFNTENTQSINSNIKQIVINQKPIPTETSISEDRQRFTLGSLSHIVNHTA 683
Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 115/194 (59%), Gaps = 6/194 (3%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
++ G+DVS F VV + +NLE+KKLVY+YL++YA+SQ D A+L++NT K D +
Sbjct: 49 LSKGRDVSEAFPQVVKNVIVKNLEIKKLVYMYLVHYAESQNDSALLSINTIQKSLNDQSQ 108
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
+IRA A+R M IRV I E + +++ +KD P+VRK AA +AK++ ++ + E
Sbjct: 109 VIRASALRVMSSIRVIDIIEVIILAIEKSVKDTSPFVRKAAAFAIAKVHKLDCDKQE--P 166
Query: 121 FLESLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVF 180
++ L+ L++D + MV+ A+ A E+ F++ K+ L + EW QV
Sbjct: 167 LIDLLEILLNDTSTMVLGAAIVAFNELCPQR----FDLLHQHYRKICQLLADFDEWSQVI 222
Query: 181 ILDALSRYKAADAR 194
+LD L++Y + R
Sbjct: 223 VLDILTKYARSQFR 236
>sp|Q759E2|AP3B_ASHGO AP-3 complex subunit beta OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=APL6 PE=3 SV=2
Length = 781
Score = 120 bits (302), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 128/528 (24%), Positives = 237/528 (44%), Gaps = 69/528 (13%)
Query: 11 FTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTM 70
F D+V + +++++++++V +YL+ YA++ P+LA+L++N+ + D NP +RALA++T+
Sbjct: 83 FADIVKNIGSDDVKVRRMVSVYLLRYAETNPNLALLSINSIQRSLSDSNPDVRALALKTL 142
Query: 71 GCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKDLIS 130
I + + + L++ + D VR A+ + KL+ ++D + LK L++
Sbjct: 143 SDINIASLYPIILHSLKKTVIDSSEVVRCQVAMTLLKLFKEQGISIKD-DVMPMLKSLLA 201
Query: 131 DNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVFILDALSRY-- 188
D+ P VV+ AAL ++ ++ + + H + + LN+ TE Q ++D Y
Sbjct: 202 DSEPSVVS---AALLLFQKAFAQELQLLHGH-YRRYCSILNQLTENAQAIMIDIFIAYAK 257
Query: 189 ----------KAADAREAE---------------------NIVERVTPRLQHANCAVVLS 217
++DA + N+ +L H+ A+V+
Sbjct: 258 EYLPRPMVRDTSSDAEAIQLPDSFNQIPFPVYDVEYDHDLNLFLSSLKKLLHSPNAMVIV 317
Query: 218 AVKMILQQM---ELITSTDVVRNLCKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTI 274
AV Q+ + + +V +L + + EI+ + L++I + P++
Sbjct: 318 AVSKAFYQLSSPKTFKDSGIVDSLLRLTVSSYIC-----SEIKELVLQSILVYCCSDPSL 372
Query: 275 LAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYA-TEVDVDFVRKAVR 333
K FF +D + + KL+I+ L SD N ++ E K A TE + +
Sbjct: 373 FRSHYKRFFLMPSDTENISIFKLKILSILVSDSNCKHIVNELKFVAGTEQSASILVEVSN 432
Query: 334 AIGRCAIKLERAAERCISVLLELIKIKV---NYVVQEAIIVIKDIFRRYPNTYESIIATL 390
+ CA + + + IS LL+ I V I V++ + ++ P + + + L
Sbjct: 433 TLSVCAQISSKWSSQIISWLLDRISSNTPIDKEVTASQINVLRSLIQKDPIKHIATVVKL 492
Query: 391 CESLDTLD-EPEAKASMIWIIGEYAE---RIDNADELLESFLESFPEEPAQVQLQLLTAT 446
+ L D P AKA +IW++GEY + RI ++L L F +E A V+LQ+L
Sbjct: 493 SKMLSNHDLLPSAKAPIIWLLGEYVQVEPRI--CPDVLRRLLPQFSKEHAHVRLQILNLA 550
Query: 447 VKLFLKK------------PTEGPQQMIQVVLNNATVETDNPDLRDRA 482
KL T QM + L A + D D+RDRA
Sbjct: 551 AKLLSHDVDSYSGDMEYDIGTSRIGQMFEAALQLAKFD-DEYDVRDRA 597
>sp|Q9M2T1|AP3BA_ARATH AP3-complex subunit beta-A OS=Arabidopsis thaliana GN=AP3BA PE=2
SV=2
Length = 987
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 161/331 (48%), Gaps = 34/331 (10%)
Query: 199 IVERVTPRLQHANCAVVLSA--VKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEI 256
+++ +P L N AVVL+A V+ I+ +E DV KK+ PL+ LL +
Sbjct: 211 LLQCTSPLLWSNNSAVVLAAAGVQWIMAPLE-----DV-----KKIVKPLLFLLRSSSAS 260
Query: 257 QYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEF 316
+YV L NI + + P++ A + FF +D VK KLE++ +A+ +I +L EF
Sbjct: 261 KYVVLCNILVFAKAVPSLFAPHFENFFICSSDAYQVKAYKLEMLSLIATTSSIASILREF 320
Query: 317 KEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKV-----------NYVV 365
++Y + D F V AIG CA +L C+ LL L++ + V+
Sbjct: 321 EDYIKDPDRRFAADTVAAIGLCAKRLMTIPTTCLDGLLALVRQESFAGDFESADGEAGVL 380
Query: 366 QEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNADELLE 425
+A++ I+ + R P +E ++ L SLD++ A+A++IW++G Y +L
Sbjct: 381 VQAVMSIQTMIERDPLRHEKVLIQLFRSLDSIKVAAARATIIWMVGVYCSLGHIIPRMLT 440
Query: 426 SFLE----SFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQ--VVLNNATVETD-NPDL 478
+ + SF E ++ +LQ+L K+ + G M++ VV E D + D+
Sbjct: 441 TITKYLAWSFKSEASETKLQILNTIAKVLISAEA-GDFHMLKRIVVYVFELGEYDLSYDI 499
Query: 479 RDRAYIYWRLLS---TDPEAAKDVVLAEKPV 506
RDR +LLS E A+D V +++ +
Sbjct: 500 RDRTRFLKKLLSCKLASHEPAEDSVASQENI 530
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 60/123 (48%), Gaps = 7/123 (5%)
Query: 70 MGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKD-L 128
M IR+ I + +C +D YVR+ AA + KL+D+ E E +E L L
Sbjct: 1 MAGIRLHVIAPLALAAVSKCARDPAVYVRRCAANALPKLHDLRLE--EHASAIEELVGIL 58
Query: 129 ISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVFILDALSRY 188
++D++P VV A AA I N+ F++ KL L + EWGQ+ ++ L RY
Sbjct: 59 LNDHSPGVVGAAAAAFTSICPNN----FKLIGKNYKKLCQILPDVEEWGQILLIGTLLRY 114
Query: 189 KAA 191
A
Sbjct: 115 VVA 117
>sp|P46682|AP3B_YEAST AP-3 complex subunit beta OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=APL6 PE=1 SV=2
Length = 809
Score = 102 bits (255), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 126/572 (22%), Positives = 248/572 (43%), Gaps = 107/572 (18%)
Query: 6 DVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRAL 65
DV F DVV + T + ++K+L++LYL+ +A++ P+L +L++N+ K D N +R
Sbjct: 78 DVQLYFADVVKNITTNDTKVKRLIHLYLLRFAENDPNLTLLSINSLQKSLSDSNSELRCF 137
Query: 66 AVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLY-----DINAELVEDRG 120
A+ + +++ + + +++ + D VR A+ + KLY D + EL
Sbjct: 138 ALSALSDMKMSSLAPIILHTVKKLVTDPSAMVRGEVALAIIKLYRAGKNDYHEEL----- 192
Query: 121 FLESLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVF 180
L+ LK+L++D +P V++ AV A E + E+ + + + W Q +
Sbjct: 193 -LDILKELMADTDPKVISCAVLAYKECYADH----LELLHGHFRRYCRIIKQLDSWSQSY 247
Query: 181 ILDALSRY------------KAADAR-------EAENIVERVTPR----------LQHAN 211
+++ L +Y K+++ + N +E + LQ N
Sbjct: 248 LIELLIKYCKQYLPKPTVVDKSSEGSPRSCPLPDKYNEIEYPSYEVVNDPDLDLFLQSLN 307
Query: 212 C-------AVVLSAVKMILQ-----QMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQYV 259
C V+LS + Q QM+ +T + L + + +T E+
Sbjct: 308 CLIYSSNPTVILSCCNALYQLASPLQMK---NTKFIEALVRTVT---MTENQGNKEMLLQ 361
Query: 260 ALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEY 319
A+ ++++ Q T+ K F+ DPI + K++I+ L ++ N+ ++ E K Y
Sbjct: 362 AIHFLSILDQ---TLFLPYTKKFYVFPKDPIVASIWKIQILSTLINESNVKEIFKELKYY 418
Query: 320 ATEVDV--DFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAII-----VI 372
+ V AV+++ RC +L + E V+ LI ++ + +++ VI
Sbjct: 419 VASAHFPENVVIMAVKSLSRCG-QLSTSWES--HVMKWLIDHMESHNLSASVLDAYVNVI 475
Query: 373 KDIFRRYPNTYESIIATLCE--SLDTLDEPEAKASMIWIIGEYAE-RIDNADELLESFLE 429
+ + ++ P + II L + ++ T A+A ++W+ GE A ++L ++
Sbjct: 476 RMLVQKNPTKHLRIIFKLADLLTVQTSLADNARAGIVWLFGEIASIEFKICPDVLRRLIQ 535
Query: 430 SFPEEPAQVQLQLLTATVKL-------FLKKPTEGPQ-----------------QMIQVV 465
+F E + + Q+L + KL F + G + QM V
Sbjct: 536 NFSNEGPETRCQILVLSAKLLSYDIDNFKQAQVTGSEENNQNPPYYDFSGSRISQMYNAV 595
Query: 466 LNNATVETDNPDLRDRAYIYWRLLSTDPEAAK 497
L A + D D+RDRA R++S+ ++ K
Sbjct: 596 LYLAKYD-DEFDIRDRA----RMISSLFDSGK 622
>sp|P41810|COPB_YEAST Coatomer subunit beta OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SEC26 PE=1 SV=2
Length = 973
Score = 83.2 bits (204), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 196/423 (46%), Gaps = 48/423 (11%)
Query: 18 MQTENLELKKLVYLY------LINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMG 71
M ++N ELKKL+Y Y L K + ++ IL N D Q PN IR +R +
Sbjct: 69 MPSKNKELKKLLYFYWEIVPKLAEDGKLRHEM-ILVCNAIQHDLQHPNEYIRGNTLRFLT 127
Query: 72 CIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVED-RGFLESLKDLIS 130
+R ++ E + + CL+ YVRK A + V ++ ++ L+ D + + S +++
Sbjct: 128 KLREAELLEQMVPSVLACLEYRHAYVRKYAILAVFSIFKVSEHLLPDAKEIINSF--IVA 185
Query: 131 DNNPMVVANAVAALAEIEENSSRPIFE---ITSHTLSKLLTALNECTEWGQVFILDALSR 187
+ +P+ NA LAE++ ++ E L LL A+ + Q FI +R
Sbjct: 186 ETDPICKRNAFIGLAELDRENALHYLENNIADIENLDPLLQAV-----FVQ-FIRQDANR 239
Query: 188 YKAADAREAENIVERVTPR------LQHANCAVVLSAVKMILQQMELITSTDVVRNLCKK 241
A A+ E ++E ++ + A VLSA +L + + + + +L K
Sbjct: 240 TPALKAQYIELLMELLSTTTSDEVIFETALALTVLSANPNVL-----VPAVNKLIDLAVK 294
Query: 242 MAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMI 301
++ + L+ + IQ + N+ + + IL +V + D V+ + L+I +
Sbjct: 295 VSDNNIKLIVLD-RIQDINANNVGALEELTLDIL----RVLNAEDLD---VRSKALDISM 346
Query: 302 KLASDRNIDQVL-LEFKEYATEVD-------VDFVRKAVRAIGRCAIKLERAAERCISVL 353
LA+ RN + V+ L KE T V+ + + + ++ I A+ A +S+L
Sbjct: 347 DLATSRNAEDVVQLLKKELQTTVNNPDQDKAMQYRQLLIKTIRTVAVNFVEMAASVVSLL 406
Query: 354 LELIKIKVNYVVQEAIIV-IKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGE 412
L+ I +N V II IK++ +YP +I+ + ++LD + +A +WI+GE
Sbjct: 407 LDFIG-DLNSVAASGIIAFIKEVIEKYPQLRANILENMVQTLDKVRSAKAYRGALWIMGE 465
Query: 413 YAE 415
YAE
Sbjct: 466 YAE 468
>sp|Q29N38|AP2A_DROPS AP-2 complex subunit alpha OS=Drosophila pseudoobscura
pseudoobscura GN=alpha-Adaptin PE=3 SV=1
Length = 939
Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 182/850 (21%), Positives = 339/850 (39%), Gaps = 123/850 (14%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G D+ + VN + + K++ YL++ + DL L + + D Q NP+
Sbjct: 67 LGHDIDFGHMEAVNLLSSNKYSEKQIGYLFISVLVNTNSDLIRLIIQSIKNDLQSRNPVH 126
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPY--VRKTAAICVAKLYDINAELVEDRG 120
LA++ + I + E + + + L D V+++AA+C+ +L+ + +++
Sbjct: 127 VNLALQCIANIGSRDMAESFSNEIPKLLVSGDTMDVVKQSAALCLLRLFRSSPDIIPGGE 186
Query: 121 FLESLKDLISDNNPMVVANAVA---ALAEIEENSSRPIFEITSHTLSKLLTA----LNEC 173
+ + L++D + VV A + AL + + + + LS+++TA L +
Sbjct: 187 WTSRIIHLLNDQHMGVVTAATSLIDALVKCNPDEYKGCVNLAVSRLSRIVTASYTDLQDY 246
Query: 174 TE------WGQVFILDALSRY---------KAADAREAENIVERV-----TPRLQHANC- 212
T W V +L L Y +A E I+ + + ++QH+N
Sbjct: 247 TYYFVPAPWLSVKLLRLLQNYNPVTEEAGVRARLNETLETILNKAQEPPKSKKVQHSNAK 306
Query: 213 -AVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLS-AEPEIQYVALRNINLIVQ- 269
AV+ A+ +I+ +D NL + L LS E ++Y+AL ++ +
Sbjct: 307 NAVLFEAINLIIH-------SDSEPNLLVRACNQLGQFLSNRETNLRYLALESMCHLATS 359
Query: 270 --RRPTILAH-EIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVD 326
+ H E+ + K + V+ ++++ + N ++++ E Y D
Sbjct: 360 EFSHEEVKKHQEVVILSMKMEKDVSVRQMAVDLLYAMCDRGNAEEIVQEMLNYLETADYS 419
Query: 327 FVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAII-VIKDIFRRYPNTYES 385
+ V + A K + V+L LI+I +YV +E VI+ + R E
Sbjct: 420 IREEMVLKVAILAEKYATDYTWYVDVILNLIRIAGDYVSEEVWYRVIQIVINR-----EE 474
Query: 386 IIATLCES-LDTLDEPEAKASMI----WIIGEYAERI--DNADELLESF--LESFPEEPA 436
+ ++ + L P +M+ +I+GE+ I D+ L F L S +
Sbjct: 475 VQGYAAKTVFEALQAPACHENMVKVGGYILGEFGNLIAGDSRSAPLVQFKLLHSKYHLCS 534
Query: 437 QVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRL---LSTDP 493
+ LL +T F+ E + V ++ + + + +L+ RA Y +L STD
Sbjct: 535 PMTRALLLSTYIKFINLFPEIRTNIQDVFRQHSNLRSADAELQQRASEYLQLSIVASTDV 594
Query: 494 EAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPEAFVTRVKTTASRTDD 553
A VL E P + + + L+ + K P RV R
Sbjct: 595 LA---TVLEEMPSFPERESSI--------------LAVLKKKKP----GRVPENEIRESK 633
Query: 554 EDYPNGSEQGYSDAPTHVADEGASPQTSSSNAP-YAATRQPAPPPAAPVSPPVPDLLGDL 612
P HV + + S++N + PA + + + D+LGD+
Sbjct: 634 SPAPTSGPGSVLQNNVHVNNSHSKLNNSNANTDLLGLSTPPANNVGSNSNSTLIDVLGDI 693
Query: 613 IGLDNSAAIVPADQAAASPVPALPVVLPASTG-----QGLQIG--AELTRQDGQVFYSML 665
G +N+ +S V L + G + LQIG +E + G++ +
Sbjct: 694 YGSNNN----------SSAVYNTKKFLFKNNGVLFENEMLQIGVKSEFRQNLGRL--GLF 741
Query: 666 FENNTQTPLDGF--MIQFN-KNTFGLAAGGALQVPQLQPGTSGRTLLPMVLFQNMSAGPP 722
+ N TQ PL F ++Q++ + T L P L+ G + LL ++ + P
Sbjct: 742 YGNKTQVPLSNFNPVLQWSAEETLKLNVQMKAVEPTLEAGAQIQQLLTAECIEDYADAPT 801
Query: 723 SSLLQVAVKNN--QQPVWYFNDKISLHV-LFTEDGRMERGSFLETWRSLPD----SNEVL 775
++++ + N QQ F+ K+ L V F E M SF W++L S +V
Sbjct: 802 ---IEISFRYNGTQQK---FSIKLPLSVNKFFEPTEMNAESFFARWKNLSGEQQRSQKVF 855
Query: 776 K-----DLPG 780
K DLPG
Sbjct: 856 KAAQPLDLPG 865
>sp|Q6FM46|COPB_CANGA Coatomer subunit beta OS=Candida glabrata (strain ATCC 2001 / CBS
138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=SEC26 PE=3
SV=1
Length = 972
Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 171/392 (43%), Gaps = 47/392 (11%)
Query: 45 ILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAIC 104
IL N D Q PN IR +R + +R ++ E + CL+ YVRK A +
Sbjct: 101 ILVCNAIQHDLQHPNEFIRGNTLRFLTKLREPELLEQMVPSTLACLEYRHAYVRKYAILA 160
Query: 105 VAKLYDINAELVED-RGFLESLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITS--- 160
V +Y ++ L+ D + + + L+++ +P+ NA L+E++ +++ +
Sbjct: 161 VLSIYKVSEHLLPDAKEIINTF--LLAETDPICKRNAFLGLSELDRDNALQYLQDNIDDI 218
Query: 161 HTLSKLLTALNECTEWGQVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVL---- 216
+L LL A A ++ DA + TP L+ C ++L
Sbjct: 219 ESLDPLLQA--------------AFVQFIRKDAIQ--------TPALKSQYCDLLLELLA 256
Query: 217 --SAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLS--AEPEIQYVALRNINLIVQRRP 272
+A +++ + +T + + K ++ L ++ ++ + L I I +R P
Sbjct: 257 SATADEVVFETALALTILSGNQTVLIKAVSKMIDLAVKVSDNNVKIIVLDRIQDINERNP 316
Query: 273 TILAH-EIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVL-LEFKEYATEV------- 323
L + + + I V+ + L I + L + RNI+ V+ L KE T V
Sbjct: 317 GCLEELTLDILRVLNAEDIDVRSKALTIAMDLVTSRNIEDVVQLLKKELQTTVINNEKEK 376
Query: 324 DVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIV-IKDIFRRYPNT 382
D+ ++ I A++ E A +S+LL+ I +N V +I +KD+ YP
Sbjct: 377 SSDYRSLLIKTIRGIAVRFEEIAANIVSLLLDFIT-DLNSVAANGVIAFVKDVVELYPQL 435
Query: 383 YESIIATLCESLDTLDEPEAKASMIWIIGEYA 414
+I+ L L++++ +A +WI+GEY+
Sbjct: 436 RSNILENLIAKLESVNSAKAYRGALWILGEYS 467
>sp|Q54HL0|COPG_DICDI Coatomer subunit gamma OS=Dictyostelium discoideum GN=copG PE=1
SV=1
Length = 898
Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 95/521 (18%), Positives = 223/521 (42%), Gaps = 53/521 (10%)
Query: 6 DVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRAL 65
+ + +F Q++++ L++L+YL L + D AI+ +++ KD L RA
Sbjct: 63 EATDIFFAATKLFQSKDIPLRRLMYLLLKELSTISQD-AIIVISSLTKDMSHKIELYRAN 121
Query: 66 AVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESL 125
A+R + I I + ++ + + DP+V A + L + E+V + + +
Sbjct: 122 AIRILCKITDSSILPQIERYFKQSIVEKDPHVSSAALVSSIHLLKVCPEIV--KRWANEV 179
Query: 126 KDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVFILDAL 185
++ IS+ + MV +A+A L I+++ + ++ S+ + L + + Q +++
Sbjct: 180 QEAISNKSNMVQYHALALLHRIKQHDRLAVSKLVSNLIKNSLRS-----PYAQSYLIRCC 234
Query: 186 SRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMI-----LQQMELITSTDVVRNLCK 240
E E + L+ N V A + I + E+ ++ V++N
Sbjct: 235 VEVIEETNTEDRIFREYIESCLRSKNEMVAYEAARSICTFKNVSNKEINSAVGVLQNF-- 292
Query: 241 KMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKL--- 297
L S +P +++ A+R +N + Q PT + P + ME L
Sbjct: 293 --------LNSTKPTLRFAAVRTLNKLAQTNPTAVI------------PCNLDMENLITD 332
Query: 298 ----------EIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAE 347
++K+ ++ N+++++ + + +++ +F V AI + K + +
Sbjct: 333 TNRSIATLAITTLLKVGNESNVERLIKQIANFLGDINDEFKIVVVDAITSLSQKFPKKYK 392
Query: 348 RCISVLLELIKIKVNYVVQEAII-VIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASM 406
I L ++++ + +++A + I + P + E + LC+ ++ D P+ +
Sbjct: 393 HLIIFLNKILRDEGTLQLKQATLDAILTVVNNIPESKEIALTELCDYIEDCDFPDLSVQI 452
Query: 407 IWIIGEYAERIDNADELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVL 466
+ +IG+ + + + + ++ +T+ K L E ++ + ++L
Sbjct: 453 LHLIGQEGPLTSSPAQYMRYIYNRVLLDGGIIRAAAVTSIAKFGL--LYEPMKEKVVILL 510
Query: 467 NNATVETDNPDLRDRAYIYWRLLS-TDPEAAKDVVLAEKPV 506
++ D+ ++RDRA +Y +L D V++ + PV
Sbjct: 511 QRCLLDEDD-EVRDRATLYLKLFKENDVRYLNKVLMDDVPV 550
>sp|P91926|AP2A_DROME AP-2 complex subunit alpha OS=Drosophila melanogaster
GN=alpha-Adaptin PE=1 SV=1
Length = 940
Score = 70.5 bits (171), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 179/850 (21%), Positives = 336/850 (39%), Gaps = 122/850 (14%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G D+ + VN + + K++ YL++ + DL L + + D Q NP+
Sbjct: 67 LGHDIDFGHMEAVNLLSSNKYSEKQIGYLFISVLVNTNSDLIRLIIQSIKNDLQSRNPVH 126
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPY--VRKTAAICVAKLYDINAELVEDRG 120
LA++ + I + E + + + L D V+++AA+C+ +L+ + +++
Sbjct: 127 VNLALQCIANIGSRDMAESFSNEIPKLLVSGDTMDVVKQSAALCLLRLFRSSPDIIPGGE 186
Query: 121 FLESLKDLISDNNPMVVANAVA---ALAEIEENSSRPIFEITSHTLSKLLTA----LNEC 173
+ + L++D + VV A + AL + + + + LS+++TA L +
Sbjct: 187 WTSRIIHLLNDQHMGVVTAATSLIDALVKRNPDEYKGCVNLAVSRLSRIVTASYTDLQDY 246
Query: 174 TE------WGQVFILDALSRY---------KAADAREAENIVERV-----TPRLQHANC- 212
T W V +L L Y +A E I+ + + ++QH+N
Sbjct: 247 TYYFVPAPWLSVKLLRLLQNYNPVTEEAGVRARLNETLETILNKAQEPPKSKKVQHSNAK 306
Query: 213 -AVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLS-AEPEIQYVALRNINLIVQ- 269
AV+ A+ +I+ +D NL + L LS E ++Y+AL ++ +
Sbjct: 307 NAVLFEAINLIIH-------SDSEPNLLVRACNQLGQFLSNRETNLRYLALESMCHLATS 359
Query: 270 --RRPTILAH-EIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVD 326
+ H E+ + K + V+ ++++ + N ++++ E Y D
Sbjct: 360 EFSHEEVKKHQEVVILSMKMEKDVSVRQMAVDLLYAMCDRGNAEEIVQEMLNYLETADYS 419
Query: 327 FVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESI 386
+ V + A K + V+L LI+I +YV +E + I
Sbjct: 420 IREEMVLKVAILAEKYATDYTWYVDVILNLIRIAGDYVSEEVWYRVIQIVINREEVQGYA 479
Query: 387 IATLCESLDTLDEPEAKASMI----WIIGEYAERI--DNADELLESF--LESFPEEPAQV 438
T+ E+L P +M+ +I+GE+ I D+ L F L S + +
Sbjct: 480 AKTVFEALQA---PACHENMVKVGGYILGEFGNLIAGDSRSAPLVQFKLLHSKYHLCSPM 536
Query: 439 QLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRL---LSTDPEA 495
LL +T F+ E + V ++ + + + +L+ RA Y +L STD A
Sbjct: 537 TRALLLSTYIKFINLFPEIRTNIQDVFRQHSNLRSADAELQQRASEYLQLSIVASTDVLA 596
Query: 496 AKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKP---PEAFVTRVKTTASRTD 552
VL E P + + + +A L KP PE + K+ A T
Sbjct: 597 ---TVLEEMPSFPERESSI-----------LAVLKK--KKPGRVPENEIRESKSPAPLT- 639
Query: 553 DEDYPNGSEQGYSDAPTHVADEGASPQTSSSNAPYAATRQPAPP-----PAAPVSPPVPD 607
S A + + + ++SNA PP + + + D
Sbjct: 640 ------------SAAQNNALVNNSHSKLNNSNANTDLLGLSTPPSNNIGSGSNSNSTLID 687
Query: 608 LLGDLIGLDNSAAIVPADQAAASPVPALPVVLPASTGQGLQIG--AELTRQDGQVFYSML 665
+LGD+ G +++ V+ + LQIG +E + G++ +
Sbjct: 688 VLGDMYGSNSNNNSSAVYNTKKFLFKNNGVLFE---NEMLQIGVKSEFRQNLGRL--GLF 742
Query: 666 FENNTQTPLDGF--MIQFN-KNTFGLAAGGALQVPQLQPGTSGRTLLPMVLFQNMSAGPP 722
+ N TQ PL F ++Q++ ++ L + P L+ G + LL ++ + P
Sbjct: 743 YGNKTQVPLTNFNPVLQWSAEDALKLNVQMKVVEPTLEAGAQIQQLLTAECIEDYADAPT 802
Query: 723 SSLLQVAVKNN--QQPVWYFNDKISLHV-LFTEDGRMERGSFLETWRSLPD----SNEVL 775
++++ + N QQ F+ K+ L V F E M SF W++L S +V
Sbjct: 803 ---IEISFRYNGTQQK---FSIKLPLSVNKFFEPTEMNAESFFARWKNLSGEQQRSQKVF 856
Query: 776 K-----DLPG 780
K DLPG
Sbjct: 857 KAAQPLDLPG 866
>sp|A0JN39|COPB_BOVIN Coatomer subunit beta OS=Bos taurus GN=COPB1 PE=1 SV=1
Length = 953
Score = 70.1 bits (170), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 96/450 (21%), Positives = 182/450 (40%), Gaps = 75/450 (16%)
Query: 25 LKKLVYLYLINYAKSQPD-----LAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKIT 79
+KKL+ ++ K+ PD IL + + KD Q PN IR +R + ++ ++
Sbjct: 74 IKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGSTLRFLCKLKEAELL 133
Query: 80 EYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKD-LISDNNPMVVA 138
E L ++ CL+ YVR+ A + + +Y L+ D E + D L+++ +
Sbjct: 134 EPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAP--ELIHDFLVNEKDASCKR 191
Query: 139 NAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWG---QVFILDALSRYKAADARE 195
NA L +++ + L L T +++ +G Q+ I++ + + A+ E
Sbjct: 192 NAFMMLIHADQDRA----------LDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPSE 241
Query: 196 AENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPE 255
+ + LQ ++ AV A A LVTL SA
Sbjct: 242 RARFIRCIYNLLQSSSPAVKYEA------------------------AGTLVTLSSAPTA 277
Query: 256 IQ-----YVAL------RNINLIVQRRPTIL----AHE-------IKVFFCKYNDPIYVK 293
I+ Y+ L N+ LIV R L AHE + + + V+
Sbjct: 278 IKAAAQCYIDLIIKESDNNVKLIVLDRLIELKEHPAHERVLQDLVMDILRVLSTPDLEVR 337
Query: 294 MEKLEIMIKLASDRNIDQVLLEFKEYATEV-------DVDFVRKA-VRAIGRCAIKLERA 345
+ L++ + L S RN++++++ K+ + D D R+ VR + C+++
Sbjct: 338 KKTLQLALDLVSSRNVEELVIVLKKEVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDM 397
Query: 346 AERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKAS 405
A I VL+E + + + +++ +R+ N I+ + E + +
Sbjct: 398 AANVIPVLMEFLSDSNEAAAADVLEFVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRG 457
Query: 406 MIWIIGEYAERIDNADELLESFLESFPEEP 435
+WI+GEY D+ ++ S E P
Sbjct: 458 ALWILGEYCSTKDDIQSVMTEVRRSLGEIP 487
>sp|Q9JIF7|COPB_MOUSE Coatomer subunit beta OS=Mus musculus GN=Copb1 PE=1 SV=1
Length = 953
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 95/450 (21%), Positives = 182/450 (40%), Gaps = 75/450 (16%)
Query: 25 LKKLVYLYLINYAKSQPD-----LAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKIT 79
+KKL+ ++ K+ PD IL + + KD Q PN IR +R + ++ ++
Sbjct: 74 IKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGSTLRFLCKLKEAELL 133
Query: 80 EYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKD-LISDNNPMVVA 138
E L ++ CL+ YVR+ A + + +Y L+ D E + D L+++ +
Sbjct: 134 EPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAP--ELIHDFLVNEKDASCKR 191
Query: 139 NAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWG---QVFILDALSRYKAADARE 195
NA L +++ + L L T +++ +G Q+ I++ + + A+ E
Sbjct: 192 NAFMMLIHADQDRA----------LDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPSE 241
Query: 196 AENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPE 255
+ + LQ ++ AV A A LVTL SA
Sbjct: 242 RARFIRCIYNLLQSSSPAVKYEA------------------------AGTLVTLSSAPTA 277
Query: 256 IQ-----YVAL------RNINLIVQRRPTIL----AHE-------IKVFFCKYNDPIYVK 293
I+ Y+ L N+ LIV R L AHE + + + V+
Sbjct: 278 IKAAAQCYIDLIIKESDNNVKLIVLDRLVELKEHPAHERVLQDLVMDILRVLSTPDLEVR 337
Query: 294 MEKLEIMIKLASDRNIDQVLLEFKEYATEV-------DVDFVRKA-VRAIGRCAIKLERA 345
+ L++ + L S RN++++++ K+ + D D R+ VR + C+++
Sbjct: 338 KKTLQLALDLVSSRNVEELVIVLKKEVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDM 397
Query: 346 AERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKAS 405
A I VL+E + + + +++ +R+ N I+ + E + +
Sbjct: 398 AANVIPVLMEFLSDSNEAAAADVLEFVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRG 457
Query: 406 MIWIIGEYAERIDNADELLESFLESFPEEP 435
+WI+GEY ++ ++ S E P
Sbjct: 458 ALWILGEYCSTKEDIQSVMTEVRRSLGEIP 487
>sp|P53618|COPB_HUMAN Coatomer subunit beta OS=Homo sapiens GN=COPB1 PE=1 SV=3
Length = 953
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 95/450 (21%), Positives = 182/450 (40%), Gaps = 75/450 (16%)
Query: 25 LKKLVYLYLINYAKSQPD-----LAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKIT 79
+KKL+ ++ K+ PD IL + + KD Q PN IR +R + ++ ++
Sbjct: 74 IKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGSTLRFLCKLKEAELL 133
Query: 80 EYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKD-LISDNNPMVVA 138
E L ++ CL+ YVR+ A + + +Y L+ D E + D L+++ +
Sbjct: 134 EPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAP--ELIHDFLVNEKDASCKR 191
Query: 139 NAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWG---QVFILDALSRYKAADARE 195
NA L +++ + L L T +++ +G Q+ I++ + + A+ E
Sbjct: 192 NAFMMLIHADQDRA----------LDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPSE 241
Query: 196 AENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPE 255
+ + LQ ++ AV A A LVTL SA
Sbjct: 242 RARFIRCIYNLLQSSSPAVKYEA------------------------AGTLVTLSSAPTA 277
Query: 256 IQ-----YVAL------RNINLIVQRRPTIL----AHE-------IKVFFCKYNDPIYVK 293
I+ Y+ L N+ LIV R L AHE + + + V+
Sbjct: 278 IKAAAQCYIDLIIKESDNNVKLIVLDRLIELKEHPAHERVLQDLVMDILRVLSTPDLEVR 337
Query: 294 MEKLEIMIKLASDRNIDQVLLEFKEYATEV-------DVDFVRKA-VRAIGRCAIKLERA 345
+ L++ + L S RN++++++ K+ + D D R+ VR + C+++
Sbjct: 338 KKTLQLALDLVSSRNVEELVIVLKKEVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDM 397
Query: 346 AERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKAS 405
A I VL+E + + + +++ +R+ N I+ + E + +
Sbjct: 398 AANVIPVLMEFLSDNNEAAAADVLEFVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRG 457
Query: 406 MIWIIGEYAERIDNADELLESFLESFPEEP 435
+WI+GEY ++ ++ S E P
Sbjct: 458 ALWILGEYCSTKEDIQSVMTEIRRSLGEIP 487
>sp|D2SW95|COPB_PIG Coatomer subunit beta OS=Sus scrofa GN=COPB1 PE=2 SV=1
Length = 953
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 95/450 (21%), Positives = 182/450 (40%), Gaps = 75/450 (16%)
Query: 25 LKKLVYLYLINYAKSQPD-----LAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKIT 79
+KKL+ ++ K+ PD IL + + KD Q PN IR +R + ++ ++
Sbjct: 74 IKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGSTLRFLCKLKEAELL 133
Query: 80 EYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKD-LISDNNPMVVA 138
E L ++ CL+ YVR+ A + + +Y L+ D E + D L+++ +
Sbjct: 134 EPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAP--ELIHDFLVNEKDASCKR 191
Query: 139 NAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWG---QVFILDALSRYKAADARE 195
NA L +++ + L L T +++ +G Q+ I++ + + A+ E
Sbjct: 192 NAFMMLIHADQDRA----------LDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPSE 241
Query: 196 AENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPE 255
+ + LQ ++ AV A A LVTL SA
Sbjct: 242 RARFIRCIYNLLQSSSPAVKYEA------------------------AGTLVTLSSAPTA 277
Query: 256 IQ-----YVAL------RNINLIVQRRPTIL----AHE-------IKVFFCKYNDPIYVK 293
I+ Y+ L N+ LIV R L AHE + + + V+
Sbjct: 278 IKAAAQCYIDLIIKESDNNVKLIVLDRLIELKEHPAHERVLQDLVMDILRVLSTPDLEVR 337
Query: 294 MEKLEIMIKLASDRNIDQVLLEFKEYATEV-------DVDFVRKA-VRAIGRCAIKLERA 345
+ L++ + L S RN++++++ K+ + D D R+ VR + C+++
Sbjct: 338 KKTLQLALDLVSSRNVEELVIVLKKEVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDM 397
Query: 346 AERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKAS 405
A I VL+E + + + +++ +R+ N I+ + E + +
Sbjct: 398 AANVIPVLMEFLSDSNEAAAADVLEFVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRG 457
Query: 406 MIWIIGEYAERIDNADELLESFLESFPEEP 435
+WI+GEY ++ ++ S E P
Sbjct: 458 ALWILGEYCSTKEDIQSVMTEVRRSLGEIP 487
>sp|P23514|COPB_RAT Coatomer subunit beta OS=Rattus norvegicus GN=Copb1 PE=1 SV=1
Length = 953
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 95/450 (21%), Positives = 182/450 (40%), Gaps = 75/450 (16%)
Query: 25 LKKLVYLYLINYAKSQPD-----LAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKIT 79
+KKL+ ++ K+ PD IL + + KD Q PN IR +R + ++ ++
Sbjct: 74 IKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGSTLRFLCKLKEAELL 133
Query: 80 EYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKD-LISDNNPMVVA 138
E L ++ CL+ YVR+ A + + +Y L+ D E + D L+++ +
Sbjct: 134 EPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFENLIPDAP--ELIHDFLVNEKDASCKR 191
Query: 139 NAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWG---QVFILDALSRYKAADARE 195
NA L +++ + L L T +++ +G Q+ I++ + + A+ E
Sbjct: 192 NAFMMLIHADQDRA----------LDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPSE 241
Query: 196 AENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPE 255
+ + LQ ++ AV A A LVTL SA
Sbjct: 242 RARFIRCIYNLLQSSSPAVKYEA------------------------AGTLVTLSSAPTA 277
Query: 256 IQ-----YVAL------RNINLIVQRRPTIL----AHE-------IKVFFCKYNDPIYVK 293
I+ Y+ L N+ LIV R L AHE + + + V+
Sbjct: 278 IKAAAQCYIDLIIKESDNNVKLIVLDRLVELKEHPAHERVLQDLVMDILRVLSTPDLEVR 337
Query: 294 MEKLEIMIKLASDRNIDQVLLEFKEYATEV-------DVDFVRKA-VRAIGRCAIKLERA 345
+ L++ + L S RN++++++ K+ + D D R+ VR + C+++
Sbjct: 338 KKTLQLALDLVSSRNVEELVIVLKKEVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDM 397
Query: 346 AERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKAS 405
A I VL+E + + + +++ +R+ N I+ + E + +
Sbjct: 398 AANVIPVLMEFLSDSNEAAAADVLEFVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRG 457
Query: 406 MIWIIGEYAERIDNADELLESFLESFPEEP 435
+WI+GEY ++ ++ S E P
Sbjct: 458 ALWILGEYCSTKEDIQSVMTEVRRSLGEIP 487
>sp|Q6Z382|COPG2_ORYSJ Coatomer subunit gamma-2 OS=Oryza sativa subsp. japonica
GN=Os07g0201100 PE=2 SV=1
Length = 889
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 105/513 (20%), Positives = 219/513 (42%), Gaps = 45/513 (8%)
Query: 6 DVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRAL 65
+ + +F Q+++ L+++VYL +I D I+ ++ +KD + RA
Sbjct: 68 EATEVFFATTKLFQSKDAGLRRMVYL-MIKELSPSADEVIIVTSSLMKDMNSKTDMYRAN 126
Query: 66 AVRTMGCIRVDKITEYLCDPLQRCLK----DDDPYVRKTAAICVAKLYDINAELVEDRGF 121
A+R + C +D L ++R LK D +P V A + L + E+V + +
Sbjct: 127 AIRVL-CRIIDST---LLTQIERYLKQAIVDKNPVVASAALVSGIYLLQTSPEVV--KRW 180
Query: 122 LESLKDLISDNNPMVVANAVAALAEIEENSSRPIFE-ITSHTLSKLLTALNECTEWGQVF 180
+++ + +V +A+A L +I +N + + +TS T + + L +C
Sbjct: 181 SNEVQEAVQSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRGSVRSPLAQCL------ 234
Query: 181 ILDALSRYKAADAREAE-NIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVV--RN 237
L RY + RE+ N P + A +IL+ IT + V R
Sbjct: 235 ----LIRYTSQVIRESSMNSQGGDRPFFDFLESCLRNKAEMVILEAARAITELNGVTSRE 290
Query: 238 LCKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAH---EIKVFFCKYNDPIYVKM 294
L + + L S++P +++ A+R +N + P + + +++ N I
Sbjct: 291 LTPAITVLQLFLSSSKPVLRFAAVRTLNKVASTHPLAVTNCNIDMESLISDQNRSIATL- 349
Query: 295 EKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLL 354
+ ++K ++ ++D+++ + + +++ +F V AI +K ++ L
Sbjct: 350 -AITTLLKTGNESSVDRLMKQMTNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLS 408
Query: 355 ELIKIKVNY-----VVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWI 409
+++ + + +V II+I+DI P+ ES + LCE ++ + ++
Sbjct: 409 NILREEGGFEYKKAIVDSIIILIRDI----PDAKESGLFHLCEFIEDCEFTYMSTQILHF 464
Query: 410 IGEYAERIDNADELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNA 469
+G + + + + E A V+ ++ K + P+ I V+L
Sbjct: 465 LGNEGPKTSDPSKYIRYIYNRVILENATVRASAVSTLAKFGALVDSLKPR--IFVLLRRC 522
Query: 470 TVETDNPDLRDRAYIYWRLL---STDPEAAKDV 499
+ D+ ++RDRA +Y +LL +T E KDV
Sbjct: 523 LFDGDD-EVRDRATLYLKLLGGEATVGETEKDV 554
>sp|Q5R922|COPB_PONAB Coatomer subunit beta OS=Pongo abelii GN=COPB1 PE=2 SV=1
Length = 953
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 95/450 (21%), Positives = 181/450 (40%), Gaps = 75/450 (16%)
Query: 25 LKKLVYLYLINYAKSQPD-----LAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKIT 79
+KKL+ ++ K+ PD IL + + KD Q PN IR +R + ++ ++
Sbjct: 74 IKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGSTLRFLCKLKEAELL 133
Query: 80 EYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKD-LISDNNPMVVA 138
E L ++ CL+ YVR+ A + + +Y L+ D E + D L+ + +
Sbjct: 134 EPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAP--ELIHDFLVDEKDASCKR 191
Query: 139 NAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWG---QVFILDALSRYKAADARE 195
NA L +++ + L L T +++ +G Q+ I++ + + A+ E
Sbjct: 192 NAFMMLIHADQDRA----------LDYLSTCIDQVQTFGDILQLVIVELIYKACHANPSE 241
Query: 196 AENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPE 255
+ + LQ ++ AV A A LVTL SA
Sbjct: 242 RARFIRCIYNLLQSSSPAVKYEA------------------------AGTLVTLSSAPTA 277
Query: 256 IQ-----YVAL------RNINLIVQRRPTIL----AHE-------IKVFFCKYNDPIYVK 293
I+ Y+ L N+ LIV R L AHE + + + V+
Sbjct: 278 IKAAAQCYIDLIIKESDNNVKLIVLDRLIELKEHPAHERVLQDLVMDILRVLSTPDLEVR 337
Query: 294 MEKLEIMIKLASDRNIDQVLLEFKEYATEV-------DVDFVRKA-VRAIGRCAIKLERA 345
+ L++ + L S RN++++++ K+ + D D R+ VR + C+++
Sbjct: 338 KKTLQLALDLVSSRNVEELVIVLKKEVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDM 397
Query: 346 AERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKAS 405
A I VL+E + + + +++ +R+ N I+ + E + +
Sbjct: 398 AANVIPVLMEFLSDNNEAAAADVLEFVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRG 457
Query: 406 MIWIIGEYAERIDNADELLESFLESFPEEP 435
+WI+GEY ++ ++ S E P
Sbjct: 458 ALWILGEYCSTKEDIQSVMTEIRRSLGEIP 487
>sp|P45437|COPB_DROME Coatomer subunit beta OS=Drosophila melanogaster GN=betaCop PE=2
SV=2
Length = 964
Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 97/434 (22%), Positives = 177/434 (40%), Gaps = 76/434 (17%)
Query: 21 ENLELKKLVYLYLINYAKSQPDLA-----ILAVNTFVKDSQDPNPLIRALAVRTMGCIRV 75
+N +KKL+ ++ K+ D IL + + KD Q PN +R +R + ++
Sbjct: 68 QNHTIKKLLLIFWEIVPKTSADGKLLQEMILVCDAYRKDLQHPNEFLRGSTLRFLCKLKE 127
Query: 76 DKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVED-----RGFLESLKDLIS 130
++ E L ++ CL YVR+ A + + +Y LV D FL++ +D+
Sbjct: 128 PELLEPLMPAIRACLDHRHSYVRRNAVLAIFTIYKNFDWLVPDGPELIASFLDTQQDMSC 187
Query: 131 DNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVFILDALSRYKA 190
N A L + + R L+ L + +++ +G + L
Sbjct: 188 KRN--------AFLMLLHADQER--------ALNYLASCIDQVHTFGDILQL-------- 223
Query: 191 ADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLL 250
++ + ++ HAN A ++ I + +S++ VR + A L+TL
Sbjct: 224 --------VIVELIYKVCHANPAERSRFIRCIYNLLN--SSSNAVR---YESAGTLITLS 270
Query: 251 SAEPEIQ-----YVAL------RNINLIVQRRPTILA-HE----------IKVFFCKYND 288
A I+ Y+ L N+ LIV R + HE + V
Sbjct: 271 LAPTAIKAAASCYIELVVKESDNNVKLIVLDRLVAMKEHEGMEKVMQDLVMDVLRVLAAP 330
Query: 289 PIYVKMEKLEIMIKLASDRNIDQVLLEFK-EYATEVDVD------FVRKAVRAIGRCAIK 341
I V+ + L + + L RNI +++L K E A +V+ + + VR + C+IK
Sbjct: 331 DIEVRRKTLALALDLVYSRNIGEMVLVLKKEVAKTHNVEHEDTGKYRQLLVRTLHTCSIK 390
Query: 342 LERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPE 401
A I VL+E + + +I I++ +++P II L E+ + +
Sbjct: 391 FPDVAANVIPVLVEFLSDTNELAAADVLIFIREAIQKFPALRALIIEHLIEAFPQIKSSK 450
Query: 402 AKASMIWIIGEYAE 415
+ +WI+GEY E
Sbjct: 451 IHRAAVWILGEYVE 464
>sp|Q5ZIA5|COPB_CHICK Coatomer subunit beta OS=Gallus gallus GN=COPB1 PE=2 SV=1
Length = 953
Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 94/450 (20%), Positives = 182/450 (40%), Gaps = 75/450 (16%)
Query: 25 LKKLVYLYLINYAKSQPD-----LAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKIT 79
+KKL+ ++ K+ PD IL + + KD Q PN IR +R + ++ ++
Sbjct: 74 IKKLLLVFWEIVPKTTPDGRLLQEMILVCDAYRKDLQHPNEFIRGSTLRFLCKLKEAELL 133
Query: 80 EYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKD-LISDNNPMVVA 138
E L ++ CL+ YVR+ A + + +Y L+ D E + D L+++ +
Sbjct: 134 EPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAP--ELIHDFLVNEKDASCKR 191
Query: 139 NAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWG---QVFILDALSRYKAADARE 195
NA L +++ + L L T +++ +G Q+ I++ + + A+ E
Sbjct: 192 NAFMMLIHADQDRA----------LDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPSE 241
Query: 196 AENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPE 255
+ + LQ ++ AV A A LVTL SA
Sbjct: 242 RARFIRCIYNLLQSSSPAVKYEA------------------------AGTLVTLSSAPTA 277
Query: 256 IQ-----YVAL------RNINLIVQRRPTIL----AHE-------IKVFFCKYNDPIYVK 293
I+ Y+ L N+ LIV R L +HE + + + V+
Sbjct: 278 IKAAAQCYIDLIIKESDNNVKLIVLDRLVELKEHPSHERVLQDLVMDILRVLSTPDLEVR 337
Query: 294 MEKLEIMIKLASDRNIDQVLLEFKEYATEV-------DVDFVRKA-VRAIGRCAIKLERA 345
+ L++ + L S RN++++++ K+ + D D R+ VR + C+++
Sbjct: 338 KKTLQLALDLVSSRNVEELVIVLKKEVIKTNNVTEHEDTDKYRQLLVRTLHSCSVRFPDM 397
Query: 346 AERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKAS 405
A I VL+E + + + +++ +R+ N I+ + E + +
Sbjct: 398 AANVIPVLMEFLSDNNEAAAADVLEFVREAIQRFDNLRPLIVEKMLEVFHAIKSVKIYRG 457
Query: 406 MIWIIGEYAERIDNADELLESFLESFPEEP 435
+WI+GEY ++ ++ S E P
Sbjct: 458 ALWILGEYCSTKEDIQSVMTEVRRSLGEIP 487
>sp|Q66HV4|COPB_DANRE Coatomer subunit beta OS=Danio rerio GN=copb1 PE=2 SV=1
Length = 953
Score = 67.0 bits (162), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 95/450 (21%), Positives = 181/450 (40%), Gaps = 75/450 (16%)
Query: 25 LKKLVYLYLINYAKSQPDLA-----ILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKIT 79
+KKL+ ++ K+ PD IL + + KD Q PN IR +R + ++ ++
Sbjct: 74 IKKLLLVFWEIVPKTTPDGKLLQEMILVCDAYRKDLQHPNEFIRGSTLRFLCKLKESELL 133
Query: 80 EYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKD-LISDNNPMVVA 138
E L ++ CL+ YVR+ A + + +Y L+ D E + D L+++ +
Sbjct: 134 EPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAP--ELIHDFLVNEKDASCKR 191
Query: 139 NAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWG---QVFILDALSRYKAADARE 195
NA L +++ + L L T +++ +G Q+ I++ + + A+ E
Sbjct: 192 NAFMMLIHADQDRA----------LDYLSTCIDQVHTFGDILQLVIVELIYKVCHANPSE 241
Query: 196 AENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPE 255
+ + LQ ++ AV A A LVTL SA
Sbjct: 242 RARFIRCIYNLLQSSSPAVKYEA------------------------AGTLVTLSSAPTA 277
Query: 256 IQ-----YVAL------RNINLIVQRRPTIL----AHE-------IKVFFCKYNDPIYVK 293
I+ Y+ L N+ LIV R L HE + + + V+
Sbjct: 278 IKAAAQCYIDLIIKESDNNVKLIVLDRLIELKEHPTHERVLQDLVMDILRVLTTPDLEVR 337
Query: 294 MEKLEIMIKLASDRNIDQVLLEFKEYATEV-------DVDFVRK-AVRAIGRCAIKLERA 345
+ L++ + L S RN++++++ K+ + D D R+ VR + C+++
Sbjct: 338 KKTLQLALDLVSSRNVEELVIVLKKEVIKTNNVTEHEDTDKYRQLLVRTLHSCSVRFPDM 397
Query: 346 AERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKAS 405
A I VL+E + + + +++ +R+ N II + E + +
Sbjct: 398 AANVIPVLMEFLSDTNEAAAADVLEFVREAIQRFDNLRPLIIEKMLEVFHAIKTVKIYRG 457
Query: 406 MIWIIGEYAERIDNADELLESFLESFPEEP 435
+WI+GEY ++ ++ S E P
Sbjct: 458 ALWILGEYCSTKEDIQSVMTEVRRSLGEIP 487
>sp|Q8H852|COPG1_ORYSJ Coatomer subunit gamma-1 OS=Oryza sativa subsp. japonica
GN=Os03g0227000 PE=2 SV=2
Length = 884
Score = 66.6 bits (161), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 102/505 (20%), Positives = 214/505 (42%), Gaps = 41/505 (8%)
Query: 6 DVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRAL 65
+ + +F V Q+++ L++LVYL +I D I+ ++ +KD + RA
Sbjct: 66 EATEVFFAVTKLFQSKDAGLRRLVYL-MIKELSPSSDEVIIVTSSLMKDMNSKTDMYRAN 124
Query: 66 AVRTMGCIRVDKITEYLCDPLQRCLK----DDDPYVRKTAAICVAKLYDINAELVEDRGF 121
A+R + C +D L ++R LK D +P V A + L N E+V + +
Sbjct: 125 AIRVL-CRIIDGT---LLTQIERYLKQAIVDKNPVVASAALVSGIHLLQANPEIV--KRW 178
Query: 122 LESLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSH-TLSKLLTALNECTEWGQVF 180
+++ + +V + +A L +I +N I ++ S T + + L +C
Sbjct: 179 SNEVQEAVQSRFALVQFHGLALLHQIRQNDRLAISKMVSGLTRGSVRSPLAQCL------ 232
Query: 181 ILDALSRYKAADAREAE-NIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLC 239
L RY + RE+ N P + + + +IL+ I DV
Sbjct: 233 ----LIRYTSQVIRESSMNTQTSDRPFFDYLESCLRHKSEMVILEAARKIAEMDVT---S 285
Query: 240 KKMAPPLVTLL----SAEPEIQYVALRNINLIVQRRPTILAH---EIKVFFCKYNDPIYV 292
+++AP + L S++P +++ A+R +N + RP + + +++ N I
Sbjct: 286 RELAPAITVLQLFLSSSKPVLRFAAVRTLNKVAMTRPLAVTNCNVDLESLMSDQNRSIAT 345
Query: 293 KMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISV 352
+ ++K ++ ++D+++ + + +++ +F V AI +K ++
Sbjct: 346 L--AITTLLKTGNESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSMMNF 403
Query: 353 LLELIKIKVNYVVQEAII-VIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIG 411
L ++ + + ++AI+ I + P+ E + LCE ++ + + ++ ++G
Sbjct: 404 LSNSLREEGGFEYKKAIVDSIVTLISEIPDAKEIGLLYLCEFIEDCEFTYLSSQILHLLG 463
Query: 412 EYAERIDNADELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATV 471
R + + E A V+ ++ K P+ I V+L
Sbjct: 464 NEGPRTSDPSRYIRYIYNRVILENATVRASAVSTLAKFGALVDALKPR--IFVLLRRCLF 521
Query: 472 ETDNPDLRDRAYIYWRLLSTDPEAA 496
+TD+ ++RDRA +Y + L D E A
Sbjct: 522 DTDD-EVRDRATLYLQTL--DGEVA 543
>sp|Q99128|AP1G1_USTMA AP-1 complex subunit gamma-1 OS=Ustilago maydis (strain 521 / FGSC
9021) GN=APL4 PE=3 SV=2
Length = 853
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 133/636 (20%), Positives = 250/636 (39%), Gaps = 109/636 (17%)
Query: 26 KKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKITEYLCDP 85
K+L YL ++ ++ L N D + N + LA+ T I ++++ LC+
Sbjct: 84 KRLGYLGIMLLLDENTEVLTLVTNGLKNDMEHSNMYVCGLALCTFANIASEEMSRDLCNE 143
Query: 86 LQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKDLISDNNPMVVANAVAALA 145
+++ + + Y+R+ AAIC ++ +L++ F++ + L+SD N V+ AV
Sbjct: 144 IEKLMGSSNTYIRRKAAICAMRIVRKVPDLIDH--FVDRTQQLLSDKNHGVLLCAVTLAI 201
Query: 146 EI--EENSSRPIFE-----ITSHTLSKLLTALN-ECTEWG------QVFILDALSRYKAA 191
EI +++ + ++ + H S + T + E G QV IL L
Sbjct: 202 EICRQDDEALTVYRRAVPLLVQHLKSLVTTGYSPEHDVSGITDPFLQVKILRLLRILGKE 261
Query: 192 DAREAENI------VERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPP 245
+A+ +E + V T ++ +++ V IL+ I + + +R + +
Sbjct: 262 NAQASETMNDILAQVATNTEASKNVGNSILYETVLTILE----IDADNGLRVMAINILGK 317
Query: 246 LVTLLSAEPEIQYVALRNINLIVQRRPT-ILAHEIKVFFCKYNDPIYVKMEKLEIMIKLA 304
++ + + I+YVAL ++ +V + H + C + I ++ LE+ L
Sbjct: 318 FLS--NRDNNIRYVALNTLSKVVSMDTNAVQRHRNIILDCLRDGDISIRRRALELSYALI 375
Query: 305 SDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYV 364
++ N+ + E + D +F I A K I +L ++K+ NYV
Sbjct: 376 NESNVRVLTRELLSFLEVADNEFKLGMTTQICLAAEKFAPNKRWHIDTVLRVLKLAGNYV 435
Query: 365 VQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASM----IWIIGEYAERIDNA 420
+E ++ R +T E T+ + L + ++ S+ +W+IGE+ + +
Sbjct: 436 REE---ILSAFIRLVCHTPELQAYTVQKLFSGLHQDFSQESLTLAAVWVIGEFGDVLIQG 492
Query: 421 D-----------------ELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQ 463
+LL S L+S P ++ +LT+ KL + Q I+
Sbjct: 493 GNFEDEELVREVQPKDVVDLLSSVLDS-PYVNGLIRQFVLTSLAKLHTRLSDASQQSRIE 551
Query: 464 VVLNNATVETD-NPDLRDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDEL 522
++ A+ ET +++ R+ + LL + VL P
Sbjct: 552 QII--ASFETSVEVEIQQRSVEFATLLKRSD--IRQGVLESMP----------------- 590
Query: 523 LANIATLSSVYHKPPEAFVTRVKTTASRTDDEDYPNGSEQGYSDAPTH-VADE---GASP 578
PPE +K T T E P GS + DA + DE +
Sbjct: 591 -------------PPE-----IKQTVLGTVSEAKPVGSTRSDKDALLDLMGDEMPVTSGG 632
Query: 579 QTSSSNAPYAATRQPAPPPAAPVSPPVPDLLGDLIG 614
T + NAP AT+Q DLL D+ G
Sbjct: 633 GTGADNAPSGATQQ-----------STHDLLADIFG 657
>sp|P54362|AP3D_DROME AP-3 complex subunit delta OS=Drosophila melanogaster GN=g PE=1
SV=4
Length = 1034
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/478 (18%), Positives = 200/478 (41%), Gaps = 39/478 (8%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G D+S +++ M + K++ YL +L +L N KD N
Sbjct: 69 LGYDISWAGFNIIEVMSSSRFTCKRIGYLAASQCFHPDSELLMLTTNMIRKDLNSQNQYD 128
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFL 122
+A+ + C ++ L + + + PY+R A + + K++ E + R
Sbjct: 129 AGVALSGLSCFISPDLSRDLANDIMTLMSSTKPYLRMKAVLMMYKVFLRYPEAL--RPAF 186
Query: 123 ESLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVFIL 182
LK+ + D +P V + AV + E+ + + + + T+ N W + I+
Sbjct: 187 PKLKEKLEDPDPGVQSAAVNVICELARKNPKNYLPLAPIFFKLMTTSTN---NWMLIKII 243
Query: 183 DALSRYKAADAREAENIVERVTPRLQHANCAVVL------SAVKMILQQMELITSTDVVR 236
+ R + ++E +T L H+ A+ L + + +++ + +
Sbjct: 244 KLFGALTPLEPRLGKKLIEPLT-NLIHSTSAMSLLYECINTVIAVLISISSGMPNHSASI 302
Query: 237 NLCKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRP-TILAHEIKVFFCKYNDPIYVKME 295
LC + L+ ++ ++Y+ L ++ I++ P ++ AH+ + C + +++
Sbjct: 303 QLCVQKLRILIE--DSDQNLKYLGLLAMSKILKTHPKSVQAHKDLILACLDDKDESIRLR 360
Query: 296 KLEIMIKLASDRNIDQVL------LEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERC 349
L+++ + S +N+ +++ +E E + D + + K + + + E
Sbjct: 361 ALDLLYGMVSKKNLMEIVKRLLGHMERAEGSAYRD-ELLYKVIEICAQSSYLYVTNFEWY 419
Query: 350 ISVLLELIKIKV----NYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKAS 405
++VL+ELI+++ ++ E ++ D+ R P + + + LDT S
Sbjct: 420 LTVLVELIQLEAGSRHGRLIAEQLL---DVAIRVPVVRQFAVNEMTNLLDTFTVSAQSNS 476
Query: 406 MI-------WIIGEYAERIDNADELLESFLESFPE-EPAQVQLQLLTATVKLFLKKPT 455
M WI+GE+A +++A++ L L P P +Q + +KLF + T
Sbjct: 477 MYEVLYAAAWIVGEFAGELEDAEKTLNILLR--PRLLPGHIQGVYVQNVIKLFARLAT 532
>sp|Q29G21|COPB_DROPS Coatomer subunit beta OS=Drosophila pseudoobscura pseudoobscura
GN=betaCop PE=3 SV=2
Length = 965
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/405 (21%), Positives = 163/405 (40%), Gaps = 71/405 (17%)
Query: 45 ILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAIC 104
IL + + KD Q PN +R +R + ++ ++ E L ++ CL YVR+ A +
Sbjct: 96 ILVCDAYRKDLQHPNEFLRGSTLRFLCKLKEPELLEPLMPAIRACLDHRHSYVRRNAVLA 155
Query: 105 VAKLYDINAELVED-----RGFLESLKDLISDNNPMVVANAVAALAEIEENSSRPIFEIT 159
+ +Y LV D FL++ +D+ N A L + + R
Sbjct: 156 IFTIYKNFDWLVPDGPELIANFLDTQQDMSCKRN--------AFLMLLHADQER------ 201
Query: 160 SHTLSKLLTALNECTEWGQVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAV 219
L+ L + +++ +G + L ++ + ++ HAN A +
Sbjct: 202 --ALNYLASCIDQVHSFGDILQL----------------VIVELIYKVCHANPAERSRFI 243
Query: 220 KMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQ-----YVAL------RNINLIV 268
+ I + +S++ VR + A L+TL A I+ Y+ L N+ LIV
Sbjct: 244 RCIYNLLN--SSSNAVR---YESAGTLITLSLAPTAIKAAASCYIELIVKESDNNVKLIV 298
Query: 269 QRRPTILAHE-----------IKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFK 317
R + + V I V+ + L + + L RNI +++L K
Sbjct: 299 LDRLIAMKENENMEKVMQDLVMDVLRVLAAPDIEVRRKALALAMDLVYSRNIGEMVLVLK 358
Query: 318 -EYATEVDVD------FVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAII 370
E A +V+ + + VR + C+IK A I VL+E + + +I
Sbjct: 359 KEVAKTHNVEHEDTGKYRQLLVRTLHTCSIKFPDVAATVIPVLVEFLSDTNELAAADVLI 418
Query: 371 VIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAE 415
I++ +++P II L E+ + + + +WI+GEY E
Sbjct: 419 FIREAIQKFPALSGLIIEHLIEAFPQIKSSKIHRAAVWILGEYVE 463
>sp|Q865S1|AP3D1_BOVIN AP-3 complex subunit delta-1 OS=Bos taurus GN=AP3D1 PE=1 SV=2
Length = 1207
Score = 63.5 bits (153), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 102/539 (18%), Positives = 223/539 (41%), Gaps = 48/539 (8%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G D+S +++ M K++ YL D+ +L N KD P+
Sbjct: 68 LGYDISWAAFNIIEVMSASKFTFKRIGYLAASQCFHEGTDVIMLTTNQIRKDLSSPSQYD 127
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFL 122
+A+ + C + L + + + PY+RK A + + K++ E + R
Sbjct: 128 TGVALTGLSCFVTPDLARDLANDIMTLMSHTKPYIRKKAVLIMYKVFLKYPESL--RPAF 185
Query: 123 ESLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVFIL 182
LK+ + D +P V + AV + E+ + + + KL+T+ W + I+
Sbjct: 186 PRLKEKLEDPDPGVQSAAVNVICELARRNPKNYLSLAP-LFFKLMTS--STNNWVLIKII 242
Query: 183 DALSRYKAADAREAENIVERVTPRLQHANCAVVL------SAVKMILQQMELITSTDVVR 236
+ R + ++E +T L H+ A+ L + + +++ + +
Sbjct: 243 KLFGALTPLEPRLGKKLIEPLT-NLIHSTSAMSLLYECVNTVIAVLISLSSGMPNHSASI 301
Query: 237 NLCKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRP-TILAHEIKVFFCKYNDPIYVKME 295
LC + L+ ++ ++Y+ L ++ I++ P ++ AH+ V C + +++
Sbjct: 302 QLCVQKLRILIE--DSDQNLKYLGLLAMSKILRTHPKSVQAHKDLVLQCLDDKDESIRLR 359
Query: 296 KLEIMIKLASDRNIDQVLLEFKEYATEVDV--------DFVRKAVRAIGRCAIKLERAAE 347
L+++ + S +N+ +++ K+ T VD + + K + + + E
Sbjct: 360 ALDLLYGMVSKKNLMEIV---KKLMTHVDKAEGTTYRDELLTKIIDICSQSNYQHITNFE 416
Query: 348 RCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLD----EPEAK 403
IS+L+EL +++ + D+ R +A + LD+ P+
Sbjct: 417 WYISILVELTRLEGTRHGHLIAAQMLDVAIRVKAIRRFAVAQMSALLDSAHLVASSPQRS 476
Query: 404 A------SMIWIIGEYAERIDNADELLESFLE-SFPEEPAQVQLQLLTATVKLF---LKK 453
+ WI GE++E + + LE+ L P +Q + VKL+ L++
Sbjct: 477 GICEVLYAAAWICGEFSEHLQEPQQTLEAMLRPKVTTLPGHIQAVYVQNVVKLYAAILQQ 536
Query: 454 P-----TEGPQQMIQVVLNN--ATVETDNPDLRDRAYIYWRLL-STDPEAAKDVVLAEK 504
T Q++ Q+++ V++ + ++++RA +L+ AKDV +AE+
Sbjct: 537 KEQAADTSAAQEVTQLLVERLPQFVQSADLEVQERASCILQLVKHVQKLQAKDVPVAEE 595
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 310,286,429
Number of Sequences: 539616
Number of extensions: 13167682
Number of successful extensions: 55213
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 294
Number of HSP's that attempted gapping in prelim test: 53555
Number of HSP's gapped (non-prelim): 1473
length of query: 862
length of database: 191,569,459
effective HSP length: 126
effective length of query: 736
effective length of database: 123,577,843
effective search space: 90953292448
effective search space used: 90953292448
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)